BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14267
(553 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/326 (35%), Positives = 172/326 (52%), Gaps = 36/326 (11%)
Query: 233 PQITTSNAKKSVETSQDVITLNGKQYQXXXXXXXXXXXXXXXXXXXXEHEFKPLALKVVD 292
P + T + K+ ++ + I++ G+ Y + + A+K V+
Sbjct: 33 PDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIY---AIKYVN 89
Query: 293 LSDITDQSIADSYLNEVELLAKLQ-GCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYM 351
L + +Q++ DSY NE+ L KLQ +I+++DY + +++Y++ME G+ DL+ ++
Sbjct: 90 LEEADNQTL-DSYRNEIAYLNKLQQHSDKIIRLYDY--EITDQYIYMVMECGNIDLNSWL 146
Query: 352 RNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGN 411
+ + +W ML AV IH GI+HSDLKPANFL V +LK+ID
Sbjct: 147 KKKKSIDPWERKS-----YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLID---- 197
Query: 412 VLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSS--GGGNTYRITYKSDVW 469
FGIA +Q D TSV KD+ GT+NYM PEA SSS G + +I+ KSDVW
Sbjct: 198 ------FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 251
Query: 470 SLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS-MKLC 528
SLGCILY M YG+TP+ I N +K+ AI +IEF IP LQ +K C
Sbjct: 252 SLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-------DIPEKDLQDVLKCC 304
Query: 529 LQKDPKARPTV----GNSVTQINNNP 550
L++DPK R ++ + QI +P
Sbjct: 305 LKRDPKQRISIPELLAHPYVQIQTHP 330
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/326 (35%), Positives = 172/326 (52%), Gaps = 36/326 (11%)
Query: 233 PQITTSNAKKSVETSQDVITLNGKQYQXXXXXXXXXXXXXXXXXXXXEHEFKPLALKVVD 292
P + T + K+ ++ + I++ G+ Y + + A+K V+
Sbjct: 33 PDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIY---AIKYVN 89
Query: 293 LSDITDQSIADSYLNEVELLAKLQ-GCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYM 351
L + +Q++ DSY NE+ L KLQ +I+++DY + +++Y++ME G+ DL+ ++
Sbjct: 90 LEEADNQTL-DSYRNEIAYLNKLQQHSDKIIRLYDY--EITDQYIYMVMECGNIDLNSWL 146
Query: 352 RNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGN 411
+ + +W ML AV IH GI+HSDLKPANFL V +LK+ID
Sbjct: 147 KKKKSIDPWERKS-----YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLID---- 197
Query: 412 VLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSS--GGGNTYRITYKSDVW 469
FGIA +Q D TSV KD+ GT+NYM PEA SSS G + +I+ KSDVW
Sbjct: 198 ------FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 251
Query: 470 SLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS-MKLC 528
SLGCILY M YG+TP+ I N +K+ AI +IEF IP LQ +K C
Sbjct: 252 SLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-------DIPEKDLQDVLKCC 304
Query: 529 LQKDPKARPTV----GNSVTQINNNP 550
L++DPK R ++ + QI +P
Sbjct: 305 LKRDPKQRISIPELLAHPYVQIQTHP 330
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 155/272 (56%), Gaps = 33/272 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQ-GCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
A+K V+L + +Q++ DSY NE+ L KLQ +I+++DY + +++Y++ME G+
Sbjct: 37 AIKYVNLEEADNQTL-DSYRNEIAYLNKLQQHSDKIIRLYDY--EITDQYIYMVMECGNI 93
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL+ +++ + +W ML AV IH GI+HSDLKPANFL V +LK+
Sbjct: 94 DLNSWLKKKKSIDPWERKS-----YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKL 148
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSS--GGGNTYRIT 463
ID FGIA +Q D TSV KD+ GT+NYM PEA SSS G + +I+
Sbjct: 149 ID----------FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 198
Query: 464 YKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQ 523
KSDVWSLGCILY M YG+TP+ I N +K+ AI +IEF IP LQ
Sbjct: 199 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-------DIPEKDLQ 251
Query: 524 S-MKLCLQKDPKARPTV----GNSVTQINNNP 550
+K CL++DPK R ++ + QI +P
Sbjct: 252 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 283
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 155/272 (56%), Gaps = 33/272 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQ-GCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
A+K V+L + +Q++ DSY NE+ L KLQ +I+++DY + +++Y++ME G+
Sbjct: 56 AIKYVNLEEADNQTL-DSYRNEIAYLNKLQQHSDKIIRLYDY--EITDQYIYMVMECGNI 112
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL+ +++ + +W ML AV IH GI+HSDLKPANFL V +LK+
Sbjct: 113 DLNSWLKKKKSIDPWERKS-----YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKL 167
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSS--GGGNTYRIT 463
ID FGIA +Q D TSV KD+ GT+NYM PEA SSS G + +I+
Sbjct: 168 ID----------FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 217
Query: 464 YKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQ 523
KSDVWSLGCILY M YG+TP+ I N +K+ AI +IEF IP LQ
Sbjct: 218 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-------DIPEKDLQ 270
Query: 524 S-MKLCLQKDPKARPTV----GNSVTQINNNP 550
+K CL++DPK R ++ + QI +P
Sbjct: 271 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 302
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 155/272 (56%), Gaps = 33/272 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQ-GCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
A+K V+L + +Q++ DSY NE+ L KLQ +I+++DY + +++Y++ME G+
Sbjct: 40 AIKYVNLEEADNQTL-DSYRNEIAYLNKLQQHSDKIIRLYDY--EITDQYIYMVMECGNI 96
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL+ +++ + +W ML AV IH GI+HSDLKPANFL V +LK+
Sbjct: 97 DLNSWLKKKKSIDPWERKS-----YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKL 151
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSS--GGGNTYRIT 463
ID FGIA +Q D TSV KD+ GT+NYM PEA SSS G + +I+
Sbjct: 152 ID----------FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 201
Query: 464 YKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQ 523
KSDVWSLGCILY M YG+TP+ I N +K+ AI +IEF IP LQ
Sbjct: 202 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-------DIPEKDLQ 254
Query: 524 S-MKLCLQKDPKARPTV----GNSVTQINNNP 550
+K CL++DPK R ++ + QI +P
Sbjct: 255 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 286
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 155/272 (56%), Gaps = 33/272 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQ-GCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
A+K V+L + +Q++ DSY NE+ L KLQ +I+++DY + +++Y++ME G+
Sbjct: 36 AIKYVNLEEADNQTL-DSYRNEIAYLNKLQQHSDKIIRLYDY--EITDQYIYMVMECGNI 92
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL+ +++ + +W ML AV IH GI+HSDLKPANFL V +LK+
Sbjct: 93 DLNSWLKKKKSIDPWERKS-----YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKL 147
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSS--GGGNTYRIT 463
ID FGIA +Q D TSV KD+ GT+NYM PEA SSS G + +I+
Sbjct: 148 ID----------FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 197
Query: 464 YKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQ 523
KSDVWSLGCILY M YG+TP+ I N +K+ AI +IEF IP LQ
Sbjct: 198 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-------DIPEKDLQ 250
Query: 524 S-MKLCLQKDPKARPTV----GNSVTQINNNP 550
+K CL++DPK R ++ + QI +P
Sbjct: 251 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 282
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 171/326 (52%), Gaps = 36/326 (11%)
Query: 233 PQITTSNAKKSVETSQDVITLNGKQYQXXXXXXXXXXXXXXXXXXXXEHEFKPLALKVVD 292
P + T + K+ ++ + I++ G+ Y + + A+K V+
Sbjct: 33 PDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIY---AIKYVN 89
Query: 293 LSDITDQSIADSYLNEVELLAKLQ-GCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYM 351
L + +Q++ DSY NE+ L KLQ +I+++DY + +++Y++ME G+ DL+ ++
Sbjct: 90 LEEADNQTL-DSYRNEIAYLNKLQQHSDKIIRLYDY--EITDQYIYMVMECGNIDLNSWL 146
Query: 352 RNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGN 411
+ + +W ML AV IH GI+HSDLKPANFL V +LK+ID
Sbjct: 147 KKKKSIDPWERKS-----YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLID---- 197
Query: 412 VLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSS--GGGNTYRITYKSDVW 469
FGIA +Q D TSV KD+ G +NYM PEA SSS G + +I+ KSDVW
Sbjct: 198 ------FGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 251
Query: 470 SLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS-MKLC 528
SLGCILY M YG+TP+ I N +K+ AI +IEF IP LQ +K C
Sbjct: 252 SLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-------DIPEKDLQDVLKCC 304
Query: 529 LQKDPKARPTV----GNSVTQINNNP 550
L++DPK R ++ + QI +P
Sbjct: 305 LKRDPKQRISIPELLAHPYVQIQTHP 330
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 153/272 (56%), Gaps = 33/272 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQ-GCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
A+K V+L + +Q++ DSY NE+ L KLQ +I+++DY + +++Y++ME G+
Sbjct: 56 AIKYVNLEEADNQTL-DSYRNEIAYLNKLQQHSDKIIRLYDY--EITDQYIYMVMECGNI 112
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL+ +++ + +W ML AV IH GI+HSDLKPANFL V +LK+
Sbjct: 113 DLNSWLKKKKSIDPWERKS-----YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKL 167
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSS--GGGNTYRIT 463
ID FGIA +Q D V KD+ GT+NYM PEA SSS G + +I+
Sbjct: 168 ID----------FGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 217
Query: 464 YKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQ 523
KSDVWSLGCILY M YG+TP+ I N +K+ AI +IEF IP LQ
Sbjct: 218 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-------DIPEKDLQ 270
Query: 524 S-MKLCLQKDPKARPTV----GNSVTQINNNP 550
+K CL++DPK R ++ + QI +P
Sbjct: 271 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 302
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 123/257 (47%), Gaps = 32/257 (12%)
Query: 285 PLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGD 344
P+ALK V + D+ D + E++LL +L P VIK Y L +++E D
Sbjct: 59 PVALKKVQIFDLMDAKARADCIKEIDLLKQLNH-PNVIKY--YASFIEDNELNIVLELAD 115
Query: 345 T-DLSKYMRNLNKMTTL-PNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
DLS+ +++ K L P + ++ ++ A++ +H+ ++H D+KPAN
Sbjct: 116 AGDLSRMIKHFKKQKRLIPER--TVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT- 172
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI 462
V+K+ D G+ T+ H + GT YMSPE + N Y
Sbjct: 173 --------GVVKLGDLGLGRFFSSKTTAAH--SLVGTPYYMSPERIHE-------NGY-- 213
Query: 463 TYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLL 522
+KSD+WSLGC+LY M ++P+ + ++ + +Q ++ P +++ + L
Sbjct: 214 NFKSDIWSLGCLLYEMAALQSPFY---GDKMNLYSLCKKIEQCDYPPLPSDHYS--EELR 268
Query: 523 QSMKLCLQKDPKARPTV 539
Q + +C+ DP+ RP V
Sbjct: 269 QLVNMCINPDPEKRPDV 285
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 30/227 (13%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K A+K++ ++ +S + + E +++A P+V+++ D K+LY++ME
Sbjct: 101 KVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSPWVVQLFCAFQD--DKYLYMVMEYM 157
Query: 344 -DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
DL M N + +P E++LA+ IH+ G+IH D+KP N L
Sbjct: 158 PGGDLVNLMSNYD----VPEKWAKFYTA--EVVLALDAIHSMGLIHRDVKPDNML----- 206
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI 462
+D G+ LK+ DFG C D+ VH DTA GT +Y+SPE S GG Y
Sbjct: 207 ---LDKHGH-LKLADFG-TCMKMDETGMVHCDTAVGTPDYISPEV---LKSQGGDGYY-- 256
Query: 463 TYKSDVWSLGCILYNMIYGRTPY--SHIPNTWAKMLAIARHKDQIEF 507
+ D WS+G L+ M+ G TP+ + T++K I HK+ + F
Sbjct: 257 GRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSK---IMDHKNSLCF 300
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 114/237 (48%), Gaps = 31/237 (13%)
Query: 306 LNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMT--TLPNT 363
L +++++ + CPY+++ + ++ ++ ME T K+ + + + +P
Sbjct: 68 LMDLDVVMRSSDCPYIVQFYGALFREGD--CWICMELMSTSFDKFYKYVYSVLDDVIPEE 125
Query: 364 MI-IIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
++ I + + L +KE IIH D+KP+N L +D GN+ K+ DFGI+
Sbjct: 126 ILGKITLATVKALNHLKE--NLKIIHRDIKPSNIL--------LDRSGNI-KLCDFGISG 174
Query: 423 SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
L D S+ K +G YM+PE ++S G + +SDVWSLG LY + GR
Sbjct: 175 QLVD---SIAKTRDAGCRPYMAPERIDPSASRQGYDV-----RSDVWSLGITLYELATGR 226
Query: 483 TPYSHIPNTWAKMLAIARHKDQIEFKPQLANN--VTIPPTLLQSMKLCLQKDPKARP 537
PY + + ++ + + PQL+N+ P+ + + LCL KD RP
Sbjct: 227 FPYPKWNSVFDQLTQVVKGD-----PPQLSNSEEREFSPSFINFVNLCLTKDESKRP 278
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 112/227 (49%), Gaps = 30/227 (13%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K A+K++ ++ +S + + E +++A P+V+++ Y + ++LY++ME
Sbjct: 95 KVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSPWVVQLF-YAFQD-DRYLYMVMEYM 151
Query: 344 -DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
DL M N + +P E++LA+ IH+ G IH D+KP N L
Sbjct: 152 PGGDLVNLMSNYD----VPEKWARFYTA--EVVLALDAIHSMGFIHRDVKPDNML----- 200
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI 462
+D G+ LK+ DFG C + + V DTA GT +Y+SPE S GG Y
Sbjct: 201 ---LDKSGH-LKLADFG-TCMKMNKEGMVRCDTAVGTPDYISPEV---LKSQGGDGYY-- 250
Query: 463 TYKSDVWSLGCILYNMIYGRTPY--SHIPNTWAKMLAIARHKDQIEF 507
+ D WS+G LY M+ G TP+ + T++K I HK+ + F
Sbjct: 251 GRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK---IMNHKNSLTF 294
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 124/276 (44%), Gaps = 54/276 (19%)
Query: 284 KPLALKVVDLSDITDQSI--ADSYLN---EVELLAKLQGCPYVIKMHDYVYDTASKHLYV 338
K +A+K++ S AD LN E+E+L KL P +IK+ ++ +D ++ +
Sbjct: 35 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH-PCIIKIKNF-FDAEDYYIVL 92
Query: 339 LMEKGDTDLSKYMRN--LNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANF 396
+ +G K + N L + T +++Y+MLLAV+ +H GIIH DLKP N
Sbjct: 93 ELMEGGELFDKVVGNKRLKEATCK--------LYFYQMLLAVQYLHENGIIHRDLKPENV 144
Query: 397 LFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGG 456
L DC+ +KI DFG + L + TS+ + T GT Y++PE ++G
Sbjct: 145 LLSSQEE---DCL---IKITDFGHSKILGE--TSLMR-TLCGTPTYLAPEVLVSVGTAGY 195
Query: 457 GNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANN-- 514
D WSLG IL+ + G P+S H+ Q+ K Q+ +
Sbjct: 196 NRAV------DCWSLGVILFICLSGYPPFSE-------------HRTQVSLKDQITSGKY 236
Query: 515 -------VTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ L +K L DPKAR T ++
Sbjct: 237 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 272
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 112/227 (49%), Gaps = 30/227 (13%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K A+K++ ++ +S + + E +++A P+V+++ Y + ++LY++ME
Sbjct: 100 KVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSPWVVQLF-YAFQD-DRYLYMVMEYM 156
Query: 344 -DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
DL M N + +P E++LA+ IH+ G IH D+KP N L
Sbjct: 157 PGGDLVNLMSNYD----VPEKWARFYTA--EVVLALDAIHSMGFIHRDVKPDNML----- 205
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI 462
+D G+ LK+ DFG C + + V DTA GT +Y+SPE S GG Y
Sbjct: 206 ---LDKSGH-LKLADFG-TCMKMNKEGMVRCDTAVGTPDYISPEV---LKSQGGDGYY-- 255
Query: 463 TYKSDVWSLGCILYNMIYGRTPY--SHIPNTWAKMLAIARHKDQIEF 507
+ D WS+G LY M+ G TP+ + T++K I HK+ + F
Sbjct: 256 GRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK---IMNHKNSLTF 299
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 124/276 (44%), Gaps = 54/276 (19%)
Query: 284 KPLALKVVDLSDITDQSI--ADSYLN---EVELLAKLQGCPYVIKMHDYVYDTASKHLYV 338
K +A+K++ S AD LN E+E+L KL P +IK+ ++ +D ++ +
Sbjct: 36 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH-PCIIKIKNF-FDAEDYYIVL 93
Query: 339 LMEKGDTDLSKYMRN--LNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANF 396
+ +G K + N L + T +++Y+MLLAV+ +H GIIH DLKP N
Sbjct: 94 ELMEGGELFDKVVGNKRLKEATCK--------LYFYQMLLAVQYLHENGIIHRDLKPENV 145
Query: 397 LFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGG 456
L DC+ +KI DFG + L + TS+ + T GT Y++PE ++G
Sbjct: 146 LLSSQEE---DCL---IKITDFGHSKILGE--TSLMR-TLCGTPTYLAPEVLVSVGTAGY 196
Query: 457 GNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANN-- 514
D WSLG IL+ + G P+S H+ Q+ K Q+ +
Sbjct: 197 NRAV------DCWSLGVILFICLSGYPPFSE-------------HRTQVSLKDQITSGKY 237
Query: 515 -------VTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ L +K L DPKAR T ++
Sbjct: 238 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 273
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 124/276 (44%), Gaps = 54/276 (19%)
Query: 284 KPLALKVVDLSDITDQSI--ADSYLN---EVELLAKLQGCPYVIKMHDYVYDTASKHLYV 338
K +A+K++ S AD LN E+E+L KL P +IK+ ++ +D ++ +
Sbjct: 36 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH-PCIIKIKNF-FDAEDYYIVL 93
Query: 339 LMEKGDTDLSKYMRN--LNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANF 396
+ +G K + N L + T +++Y+MLLAV+ +H GIIH DLKP N
Sbjct: 94 ELMEGGELFDKVVGNKRLKEATCK--------LYFYQMLLAVQYLHENGIIHRDLKPENV 145
Query: 397 LFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGG 456
L DC+ +KI DFG + L + TS+ + T GT Y++PE ++G
Sbjct: 146 LLSSQEE---DCL---IKITDFGHSKILGE--TSLMR-TLCGTPTYLAPEVLVSVGTAGY 196
Query: 457 GNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANN-- 514
D WSLG IL+ + G P+S H+ Q+ K Q+ +
Sbjct: 197 NRAV------DCWSLGVILFICLSGYPPFSE-------------HRTQVSLKDQITSGKY 237
Query: 515 -------VTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ L +K L DPKAR T ++
Sbjct: 238 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 273
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 124/276 (44%), Gaps = 54/276 (19%)
Query: 284 KPLALKVVDLSDITDQSI--ADSYLN---EVELLAKLQGCPYVIKMHDYVYDTASKHLYV 338
K +A+K++ S AD LN E+E+L KL P +IK+ ++ +D ++ +
Sbjct: 36 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH-PCIIKIKNF-FDAEDYYIVL 93
Query: 339 LMEKGDTDLSKYMRN--LNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANF 396
+ +G K + N L + T +++Y+MLLAV+ +H GIIH DLKP N
Sbjct: 94 ELMEGGELFDKVVGNKRLKEATCK--------LYFYQMLLAVQYLHENGIIHRDLKPENV 145
Query: 397 LFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGG 456
L DC+ +KI DFG + L + TS+ + T GT Y++PE ++G
Sbjct: 146 LLSSQEE---DCL---IKITDFGHSKILGE--TSLMR-TLCGTPTYLAPEVLVSVGTAGY 196
Query: 457 GNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANN-- 514
D WSLG IL+ + G P+S H+ Q+ K Q+ +
Sbjct: 197 NRAV------DCWSLGVILFICLSGYPPFSE-------------HRTQVSLKDQITSGKY 237
Query: 515 -------VTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ L +K L DPKAR T ++
Sbjct: 238 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 273
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 112/227 (49%), Gaps = 30/227 (13%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K A+K++ ++ +S + + E +++A P+V+++ Y + ++LY++ME
Sbjct: 100 KVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSPWVVQLF-YAFQD-DRYLYMVMEYM 156
Query: 344 -DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
DL M N + +P E++LA+ IH+ G IH D+KP N L
Sbjct: 157 PGGDLVNLMSNYD----VPEKWARFYTA--EVVLALDAIHSMGFIHRDVKPDNML----- 205
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI 462
+D G+ LK+ DFG C + + V DTA GT +Y+SPE S GG Y
Sbjct: 206 ---LDKSGH-LKLADFG-TCMKMNKEGMVRCDTAVGTPDYISPEV---LKSQGGDGYY-- 255
Query: 463 TYKSDVWSLGCILYNMIYGRTPY--SHIPNTWAKMLAIARHKDQIEF 507
+ D WS+G LY M+ G TP+ + T++K I HK+ + F
Sbjct: 256 GRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK---IMNHKNSLTF 299
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 124/276 (44%), Gaps = 54/276 (19%)
Query: 284 KPLALKVVDLSDITDQSI--ADSYLN---EVELLAKLQGCPYVIKMHDYVYDTASKHLYV 338
K +A+K++ S AD LN E+E+L KL P +IK+ ++ +D ++ +
Sbjct: 42 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH-PCIIKIKNF-FDAEDYYIVL 99
Query: 339 LMEKGDTDLSKYMRN--LNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANF 396
+ +G K + N L + T +++Y+MLLAV+ +H GIIH DLKP N
Sbjct: 100 ELMEGGELFDKVVGNKRLKEATCK--------LYFYQMLLAVQYLHENGIIHRDLKPENV 151
Query: 397 LFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGG 456
L DC+ +KI DFG + L + TS+ + T GT Y++PE ++G
Sbjct: 152 LLSSQEE---DCL---IKITDFGHSKILGE--TSLMR-TLCGTPTYLAPEVLVSVGTAGY 202
Query: 457 GNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANN-- 514
D WSLG IL+ + G P+S H+ Q+ K Q+ +
Sbjct: 203 NRAV------DCWSLGVILFICLSGYPPFSE-------------HRTQVSLKDQITSGKY 243
Query: 515 -------VTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ L +K L DPKAR T ++
Sbjct: 244 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 279
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 116/256 (45%), Gaps = 52/256 (20%)
Query: 302 ADSYLN---EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN--LNK 356
AD LN E+E+L KL P +IK+ ++ +D ++ + + +G K + N L +
Sbjct: 181 ADPALNVETEIEILKKLNH-PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE 238
Query: 357 MTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
T +++Y+MLLAV+ +H GIIH DLKP N L DC+ +KI
Sbjct: 239 ATCK--------LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE---DCL---IKIT 284
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG + L + TS+ + T GT Y++PE ++G D WSLG IL+
Sbjct: 285 DFGHSKILGE--TSLMR-TLCGTPTYLAPEVLVSVGTAGYNRA------VDCWSLGVILF 335
Query: 477 NMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANN---------VTIPPTLLQSMKL 527
+ G P+S H+ Q+ K Q+ + + L +K
Sbjct: 336 ICLSGYPPFSE-------------HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK 382
Query: 528 CLQKDPKARPTVGNSV 543
L DPKAR T ++
Sbjct: 383 LLVVDPKARFTTEEAL 398
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 116/256 (45%), Gaps = 52/256 (20%)
Query: 302 ADSYLN---EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN--LNK 356
AD LN E+E+L KL P +IK+ ++ +D ++ + + +G K + N L +
Sbjct: 195 ADPALNVETEIEILKKLNH-PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE 252
Query: 357 MTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
T +++Y+MLLAV+ +H GIIH DLKP N L DC+ +KI
Sbjct: 253 ATCK--------LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE---DCL---IKIT 298
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG + L + TS+ + T GT Y++PE ++G D WSLG IL+
Sbjct: 299 DFGHSKILGE--TSLMR-TLCGTPTYLAPEVLVSVGTAGYNRA------VDCWSLGVILF 349
Query: 477 NMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANN---------VTIPPTLLQSMKL 527
+ G P+S H+ Q+ K Q+ + + L +K
Sbjct: 350 ICLSGYPPFSE-------------HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK 396
Query: 528 CLQKDPKARPTVGNSV 543
L DPKAR T ++
Sbjct: 397 LLVVDPKARFTTEEAL 412
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 115/246 (46%), Gaps = 35/246 (14%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME---KG 343
A+K+++ ++ ++ + E ++L C ++ +H D HLY++M+ G
Sbjct: 119 AMKILNKWEMLKRAETACFREERDVLVN-GDCQWITALHYAFQD--ENHLYLVMDYYVGG 175
Query: 344 D--TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGN 401
D T LSK+ LP M + EM+LA+ IH +H D+KP N L
Sbjct: 176 DLLTLLSKFE------DKLPEDMARFYIG--EMVLAIDSIHQLHYVHRDIKPDNVL---- 223
Query: 402 VLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYR 461
+D G++ ++ DFG + DD T V A GT +Y+SPE Q G G +
Sbjct: 224 ----LDVNGHI-RLADFGSCLKMNDDGT-VQSSVAVGTPDYISPEIL-QAMEDGMG---K 273
Query: 462 ITYKSDVWSLGCILYNMIYGRTPY--SHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPP 519
+ D WSLG +Y M+YG TP+ + T+ K I H+++ +F + +
Sbjct: 274 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK---IMNHEERFQFPSHVTDVSEEAK 330
Query: 520 TLLQSM 525
L+Q +
Sbjct: 331 DLIQRL 336
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 107/201 (53%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GD 344
+A+K++D + + NEV++ +L+ P ++++++Y D S ++Y+++E +
Sbjct: 39 VAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH-PSILELYNYFED--SNYVYLVLEMCHN 95
Query: 345 TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLK 404
++++Y++N ++ MH +++ + +H+ GI+H DL +N L N+
Sbjct: 96 GEMNRYLKN--RVKPFSENEARHFMH--QIITGMLYLHSHGILHRDLTLSNLLLTRNM-- 149
Query: 405 IIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
+KI DFG+A L+ + T GT NY+SPE A T S+ G
Sbjct: 150 -------NIKIADFGLATQLKMPHEKHY--TLCGTPNYISPEIA--TRSAHG-------L 191
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
+SDVWSLGC+ Y ++ GR P+
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPF 212
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 115/246 (46%), Gaps = 35/246 (14%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME---KG 343
A+K+++ ++ ++ + E ++L C ++ +H D HLY++M+ G
Sbjct: 103 AMKILNKWEMLKRAETACFREERDVLVN-GDCQWITALHYAFQD--ENHLYLVMDYYVGG 159
Query: 344 D--TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGN 401
D T LSK+ LP M + EM+LA+ IH +H D+KP N L
Sbjct: 160 DLLTLLSKFE------DKLPEDMARFYIG--EMVLAIDSIHQLHYVHRDIKPDNVL---- 207
Query: 402 VLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYR 461
+D G++ ++ DFG + DD T V A GT +Y+SPE Q G G +
Sbjct: 208 ----LDVNGHI-RLADFGSCLKMNDDGT-VQSSVAVGTPDYISPEIL-QAMEDGMG---K 257
Query: 462 ITYKSDVWSLGCILYNMIYGRTPY--SHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPP 519
+ D WSLG +Y M+YG TP+ + T+ K I H+++ +F + +
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK---IMNHEERFQFPSHVTDVSEEAK 314
Query: 520 TLLQSM 525
L+Q +
Sbjct: 315 DLIQRL 320
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 78/167 (46%), Gaps = 31/167 (18%)
Query: 328 VYDTASKHL------YVLMEKGD-TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKE 380
VYDT Y++ME D L + MT P I +I + A+
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT--PKRAIEVIA---DACQALNF 131
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTAS-GT 439
H GIIH D+KPAN L N +K++DFGIA ++ D SV + A GT
Sbjct: 132 SHQNGIIHRDVKPANILISAT---------NAVKVVDFGIARAIADSGNSVXQTAAVIGT 182
Query: 440 LNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
Y+SPE A S + +SDV+SLGC+LY ++ G P++
Sbjct: 183 AQYLSPEQARGDS---------VDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 29/235 (12%)
Query: 306 LNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN-LNKMTTLPNTM 364
L ++++ + CP+ + + ++ +++ ME DT L K+ + ++K T+P +
Sbjct: 53 LMDLDISMRTVDCPFTVTFYGALFREGD--VWICMELMDTSLDKFYKQVIDKGQTIPEDI 110
Query: 365 IIIIMHWYEMLLAVKEIHA-AGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACS 423
+ I ++ A++ +H+ +IH D+KP+N L I+ +G V K+ DFGI+
Sbjct: 111 LGKIA--VSIVKALEHLHSKLSVIHRDVKPSNVL--------INALGQV-KMCDFGISGY 159
Query: 424 LQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRT 483
L DD V KD +G YM+PE + G + KSD+WSLG + + R
Sbjct: 160 LVDD---VAKDIDAGCKPYMAPERINPELNQKG-----YSVKSDIWSLGITMIELAILRF 211
Query: 484 PYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
PY + ++ + E PQL + + CL+K+ K RPT
Sbjct: 212 PYDSWGTPFQQLKQVVE-----EPSPQLPAD-KFSAEFVDFTSQCLKKNSKERPT 260
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 113/239 (47%), Gaps = 38/239 (15%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME--KGDTDLSKYMRNLNKMTTLPNTMI 365
E+E+L L P +IK+ + D ++Y++ME +G L + + + L +
Sbjct: 70 EIEVLKSLDH-PNIIKIFEVFEDY--HNMYIVMETCEGGELLERIVSAQARGKALSEGYV 126
Query: 366 IIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQ 425
+M +M+ A+ H+ ++H DLKP N LF + +KIIDFG+A +
Sbjct: 127 AELMK--QMMNALAYFHSQHVVHKDLKPENILFQDT------SPHSPIKIIDFGLAELFK 178
Query: 426 DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
D+ H A+GT YM+PE + +T+K D+WS G ++Y ++ G P+
Sbjct: 179 SDE---HSTNAAGTALYMAPEVFKRD----------VTFKCDIWSAGVVMYFLLTGCLPF 225
Query: 486 SHIPNTWAKMLAIARHKD---QIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
+ + ++ A +K+ +E +P + P + +K L KDP+ RP+
Sbjct: 226 T--GTSLEEVQQKATYKEPNYAVECRP-------LTPQAVDLLKQMLTKDPERRPSAAQ 275
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 37/208 (17%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME--KGD 344
A+KV+D S D S E+E+L + P +I + D VYD KH+Y++ E +G
Sbjct: 56 AVKVIDKSK-RDPS------EEIEILLRYGQHPNIITLKD-VYDDG-KHVYLVTELMRGG 106
Query: 345 TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLK 404
L K +R K + ++ + + V+ +H+ G++H DLKP+N L+V
Sbjct: 107 ELLDKILRQ--KFFSEREASFVL----HTIGKTVEYLHSQGVVHRDLKPSNILYV----- 155
Query: 405 IIDCIGN--VLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI 462
D GN L+I DFG A L+ + + T T N+++PE + G
Sbjct: 156 --DESGNPECLRICDFGFAKQLRAENGLLM--TPCYTANFVAPEVLKRQGYDEG------ 205
Query: 463 TYKSDVWSLGCILYNMIYGRTPYSHIPN 490
D+WSLG +LY M+ G TP+++ P+
Sbjct: 206 ---CDIWSLGILLYTMLAGYTPFANGPS 230
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 39/222 (17%)
Query: 320 YVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVK 379
+V+ H + D + ++V++E + K T P + +++L +
Sbjct: 78 HVVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEAR----YYLRQIVLGCQ 131
Query: 380 EIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGT 439
+H +IH DLK N LF+ L++ KI DFG+A ++ D K T GT
Sbjct: 132 YLHRNRVIHRDLKLGN-LFLNEDLEV--------KIGDFGLATKVEYDGE--RKKTLCGT 180
Query: 440 LNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY--SHIPNTWAKMLA 497
NY++PE + S ++ DVWS+GCI+Y ++ G+ P+ S + T+ L
Sbjct: 181 PNYIAPEVLSKKGHS---------FEVDVWSIGCIMYTLLVGKPPFETSCLKETY---LR 228
Query: 498 IARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTV 539
I +++ I P+ N V +L+Q M LQ DP ARPT+
Sbjct: 229 IKKNEYSI---PKHINPVAA--SLIQKM---LQTDPTARPTI 262
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 112/237 (47%), Gaps = 35/237 (14%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME-- 341
K A+K+++ ++ ++ + E ++L ++ +H D +LY++M+
Sbjct: 100 KVFAMKILNKWEMLKRAETACFREERDVLVNGDS-KWITTLHYAFQD--DNNLYLVMDYY 156
Query: 342 -KGD--TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLF 398
GD T LSK+ L P M + EM++A+ +H +H D+KP N L
Sbjct: 157 VGGDLLTLLSKFEDRL------PEEMARFYLA--EMVIAIDSVHQLHYVHRDIKPDNIL- 207
Query: 399 VGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGN 458
+D G++ ++ DFG L +D T V A GT +Y+SPE Q G G
Sbjct: 208 -------MDMNGHI-RLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEIL-QAMEGGKG- 256
Query: 459 TYRITYKSDVWSLGCILYNMIYGRTPY--SHIPNTWAKMLAIARHKDQIEFKPQLAN 513
R + D WSLG +Y M+YG TP+ + T+ K I HK++ +F Q+ +
Sbjct: 257 --RYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK---IMNHKERFQFPTQVTD 308
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 39/222 (17%)
Query: 320 YVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVK 379
+V+ H + D + ++V++E + K T P + +++L +
Sbjct: 82 HVVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEAR----YYLRQIVLGCQ 135
Query: 380 EIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGT 439
+H +IH DLK N LF+ L++ KI DFG+A ++ D K T GT
Sbjct: 136 YLHRNRVIHRDLKLGN-LFLNEDLEV--------KIGDFGLATKVEYDGE--RKKTLCGT 184
Query: 440 LNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY--SHIPNTWAKMLA 497
NY++PE + S ++ DVWS+GCI+Y ++ G+ P+ S + T+ L
Sbjct: 185 PNYIAPEVLSKKGHS---------FEVDVWSIGCIMYTLLVGKPPFETSCLKETY---LR 232
Query: 498 IARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTV 539
I +++ I P+ N V +L+Q M LQ DP ARPT+
Sbjct: 233 IKKNEYSI---PKHINPVAA--SLIQKM---LQTDPTARPTI 266
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 37/208 (17%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME--KGD 344
A+KV+D S D S E+E+L + P +I + D VYD KH+Y++ E +G
Sbjct: 56 AVKVIDKSK-RDPS------EEIEILLRYGQHPNIITLKD-VYDDG-KHVYLVTELMRGG 106
Query: 345 TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLK 404
L K +R K + ++ + + V+ +H+ G++H DLKP+N L+V
Sbjct: 107 ELLDKILRQ--KFFSEREASFVL----HTIGKTVEYLHSQGVVHRDLKPSNILYV----- 155
Query: 405 IIDCIGN--VLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI 462
D GN L+I DFG A L+ + + T T N+++PE + G
Sbjct: 156 --DESGNPECLRICDFGFAKQLRAENGLLM--TPCYTANFVAPEVLKRQGYDEG------ 205
Query: 463 TYKSDVWSLGCILYNMIYGRTPYSHIPN 490
D+WSLG +LY M+ G TP+++ P+
Sbjct: 206 ---CDIWSLGILLYTMLAGYTPFANGPS 230
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 33/169 (19%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
+++L + +H +IH DLK N LF+ L++ KI DFG+A ++ D
Sbjct: 125 QIVLGCQYLHRNRVIHRDLKLGN-LFLNEDLEV--------KIGDFGLATKVEYDGE--R 173
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY--SHIPN 490
K T GT NY++PE + S ++ DVWS+GCI+Y ++ G+ P+ S +
Sbjct: 174 KKTLCGTPNYIAPEVLSKKGHS---------FEVDVWSIGCIMYTLLVGKPPFETSCLKE 224
Query: 491 TWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTV 539
T+ L I +++ I P+ N V +L+Q M LQ DP ARPT+
Sbjct: 225 TY---LRIKKNEYSI---PKHINPVAA--SLIQKM---LQTDPTARPTI 262
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 282 EFKPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHL----- 336
+ + +A+KV+ D S + E + A L P ++ VYDT
Sbjct: 36 DHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HPAIVA----VYDTGEAETPAGPL 90
Query: 337 -YVLMEKGD-TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPA 394
Y++ME D L + MT P I +I + A+ H GIIH D+KPA
Sbjct: 91 PYIVMEYVDGVTLRDIVHTEGPMT--PKRAIEVIA---DACQALNFSHQNGIIHRDVKPA 145
Query: 395 NFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTSS 453
N + N +K++DFGIA ++ D SV + A GT Y+SPE A S
Sbjct: 146 NIMISAT---------NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS- 195
Query: 454 SGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
+ +SDV+SLGC+LY ++ G P++
Sbjct: 196 --------VDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 282 EFKPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHL----- 336
+ + +A+KV+ D S + E + A L P ++ VYDT
Sbjct: 36 DHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HPAIVA----VYDTGEAETPAGPL 90
Query: 337 -YVLMEKGD-TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPA 394
Y++ME D L + MT P I +I + A+ H GIIH D+KPA
Sbjct: 91 PYIVMEYVDGVTLRDIVHTEGPMT--PKRAIEVIA---DACQALNFSHQNGIIHRDVKPA 145
Query: 395 NFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTSS 453
N + N +K++DFGIA ++ D SV + A GT Y+SPE A S
Sbjct: 146 NIMISAT---------NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS- 195
Query: 454 SGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
+ +SDV+SLGC+LY ++ G P++
Sbjct: 196 --------VDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 78/167 (46%), Gaps = 31/167 (18%)
Query: 328 VYDTASKHL------YVLMEKGD-TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKE 380
VYDT Y++ME D L + MT P I +I + A+
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT--PKRAIEVIADACQ---ALNF 131
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTAS-GT 439
H GIIH D+KPAN + N +K++DFGIA ++ D SV + A GT
Sbjct: 132 SHQNGIIHRDVKPANIMISAT---------NAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 440 LNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
Y+SPE A S + +SDV+SLGC+LY ++ G P++
Sbjct: 183 AQYLSPEQARGDS---------VDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 31/199 (15%)
Query: 296 ITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME--KGDTDLSKYMRN 353
I D+S D E+E+L + P +I + D VYD K++YV+ E KG L K +R
Sbjct: 54 IIDKSKRDP-TEEIEILLRYGQHPNIITLKD-VYDDG-KYVYVVTELMKGGELLDKILRQ 110
Query: 354 LNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGN-- 411
+ ++ I V+ +HA G++H DLKP+N L+V D GN
Sbjct: 111 KFFSEREASAVLFTITK------TVEYLHAQGVVHRDLKPSNILYV-------DESGNPE 157
Query: 412 VLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSL 471
++I DFG A L+ + + T T N+++PE + D+WSL
Sbjct: 158 SIRICDFGFAKQLRAENGLLM--TPCYTANFVAPEVLERQGYDAA---------CDIWSL 206
Query: 472 GCILYNMIYGRTPYSHIPN 490
G +LY M+ G TP+++ P+
Sbjct: 207 GVLLYTMLTGYTPFANGPD 225
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 29/235 (12%)
Query: 306 LNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN-LNKMTTLPNTM 364
L ++++ + CP+ + + ++ +++ ME DT L K+ + ++K T+P +
Sbjct: 97 LMDLDISMRTVDCPFTVTFYGALFREGD--VWICMELMDTSLDKFYKQVIDKGQTIPEDI 154
Query: 365 IIIIMHWYEMLLAVKEIHAA-GIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACS 423
+ I ++ A++ +H+ +IH D+KP+N L I+ +G V K+ DFGI+
Sbjct: 155 LGKIA--VSIVKALEHLHSKLSVIHRDVKPSNVL--------INALGQV-KMCDFGISGY 203
Query: 424 LQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRT 483
L D SV K +G YM+PE + G + KSD+WSLG + + R
Sbjct: 204 LVD---SVAKTIDAGCKPYMAPERINPELNQKG-----YSVKSDIWSLGITMIELAILRF 255
Query: 484 PYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
PY + ++ + E PQL + + CL+K+ K RPT
Sbjct: 256 PYDSWGTPFQQLKQVVE-----EPSPQLPAD-KFSAEFVDFTSQCLKKNSKERPT 304
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 39/222 (17%)
Query: 320 YVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVK 379
+V+ H + D + ++V++E + K T P + +++L +
Sbjct: 102 HVVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEAR----YYLRQIVLGCQ 155
Query: 380 EIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGT 439
+H +IH DLK N LF+ L++ KI DFG+A ++ D K GT
Sbjct: 156 YLHRNRVIHRDLKLGN-LFLNEDLEV--------KIGDFGLATKVEYDGE--RKKVLCGT 204
Query: 440 LNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY--SHIPNTWAKMLA 497
NY++PE + S ++ DVWS+GCI+Y ++ G+ P+ S + T+ L
Sbjct: 205 PNYIAPEVLSKKGHS---------FEVDVWSIGCIMYTLLVGKPPFETSCLKETY---LR 252
Query: 498 IARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTV 539
I +++ I P+ N V +L+Q M LQ DP ARPT+
Sbjct: 253 IKKNEYSI---PKHINPVAA--SLIQKM---LQTDPTARPTI 286
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 31/210 (14%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME-- 341
K L K +D +T+ ++EV LL +L+ P +++ +D + D + LY++ME
Sbjct: 32 KILVWKELDYGSMTEAE-KQMLVSEVNLLRELKH-PNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 342 KGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIH-----AAGIIHSDLKPANF 396
+G S + + L ++ +M ++ LA+KE H ++H DLKPAN
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMT--QLTLALKECHRRSDGGHTVLHRDLKPANV 147
Query: 397 LFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGG 456
G NV K+ DFG+A L D TS K T GT YMSPE + S +
Sbjct: 148 FLDGK--------QNV-KLGDFGLARILNHD-TSFAK-TFVGTPYYMSPEQMNRMSYNE- 195
Query: 457 GNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
KSD+WSLGC+LY + P++
Sbjct: 196 --------KSDIWSLGCLLYELCALMPPFT 217
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 39/222 (17%)
Query: 320 YVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVK 379
+V+ H + D + ++V++E + K T P + +++L +
Sbjct: 100 HVVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEAR----YYLRQIVLGCQ 153
Query: 380 EIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGT 439
+H +IH DLK N LF+ L++ KI DFG+A ++ D K GT
Sbjct: 154 YLHRNRVIHRDLKLGN-LFLNEDLEV--------KIGDFGLATKVEYDGE--RKKVLCGT 202
Query: 440 LNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY--SHIPNTWAKMLA 497
NY++PE + S ++ DVWS+GCI+Y ++ G+ P+ S + T+ L
Sbjct: 203 PNYIAPEVLSKKGHS---------FEVDVWSIGCIMYTLLVGKPPFETSCLKETY---LR 250
Query: 498 IARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTV 539
I +++ I P+ N V +L+Q M LQ DP ARPT+
Sbjct: 251 IKKNEYSI---PKHINPVAA--SLIQKM---LQTDPTARPTI 284
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 33/169 (19%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
+++L + +H +IH DLK N LF+ L++ KI DFG+A ++ D
Sbjct: 123 QIVLGCQYLHRNRVIHRDLKLGN-LFLNEDLEV--------KIGDFGLATKVEYDGER-- 171
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY--SHIPN 490
K GT NY++PE + S ++ DVWS+GCI+Y ++ G+ P+ S +
Sbjct: 172 KKVLCGTPNYIAPEVLSKKGHS---------FEVDVWSIGCIMYTLLVGKPPFETSCLKE 222
Query: 491 TWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTV 539
T+ L I +++ I P+ N V +L+Q M LQ DP ARPT+
Sbjct: 223 TY---LRIKKNEYSI---PKHINPVA--ASLIQKM---LQTDPTARPTI 260
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 78/167 (46%), Gaps = 31/167 (18%)
Query: 328 VYDTASKHL------YVLMEKGD-TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKE 380
VYDT Y++ME D L + MT P I +I + A+
Sbjct: 94 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT--PKRAIEVIA---DACQALNF 148
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTAS-GT 439
H GIIH D+KPAN + N +K++DFGIA ++ D SV + A GT
Sbjct: 149 SHQNGIIHRDVKPANIMISAT---------NAVKVMDFGIARAIADSGNSVTQTAAVIGT 199
Query: 440 LNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
Y+SPE A S + +SDV+SLGC+LY ++ G P++
Sbjct: 200 AQYLSPEQARGDS---------VDARSDVYSLGCVLYEVLTGEPPFT 237
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 74/152 (48%), Gaps = 25/152 (16%)
Query: 337 YVLMEKGD-TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPAN 395
Y++ME D L + MT P I +I + A+ H GIIH D+KPAN
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMT--PKRAIEVIADACQ---ALNFSHQNGIIHRDVKPAN 146
Query: 396 FLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTSSS 454
+ N +K++DFGIA ++ D SV + A GT Y+SPE A S
Sbjct: 147 IMISAT---------NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-- 195
Query: 455 GGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
+ +SDV+SLGC+LY ++ G P++
Sbjct: 196 -------VDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 296 ITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME--KGDTDLSKYMRN 353
I D+S D E+E+L + P +I + D VYD K++YV+ E KG L K +R
Sbjct: 54 IIDKSKRDP-TEEIEILLRYGQHPNIITLKD-VYDDG-KYVYVVTELXKGGELLDKILRQ 110
Query: 354 LNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGN-- 411
+ ++ I V+ +HA G++H DLKP+N L+V D GN
Sbjct: 111 KFFSEREASAVLFTITK------TVEYLHAQGVVHRDLKPSNILYV-------DESGNPE 157
Query: 412 VLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSL 471
++I DFG A L+ + + T T N+++PE + D+WSL
Sbjct: 158 SIRICDFGFAKQLRAENGLL--XTPCYTANFVAPEVLERQGYDAA---------CDIWSL 206
Query: 472 GCILYNMIYGRTPYSHIPN 490
G +LY + G TP+++ P+
Sbjct: 207 GVLLYTXLTGYTPFANGPD 225
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 85/179 (47%), Gaps = 25/179 (13%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
E+ L +G P ++K+H+ +D H +++ME + + + K T
Sbjct: 55 EITALKLCEGHPNIVKLHEVFHDQL--HTFLVMEL--LNGGELFERIKKKKHFSETEASY 110
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV-LKIIDFGIACSLQD 426
IM +++ AV +H G++H DLKP N LF D N+ +KIIDFG A
Sbjct: 111 IMR--KLVSAVSHMHDVGVVHRDLKPENLLFT-------DENDNLEIKIIDFGFARLKPP 161
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
D + T TL+Y +PE Q N Y + D+WSLG ILY M+ G+ P+
Sbjct: 162 DNQPL--KTPCFTLHYAAPELLNQ-------NGYDES--CDLWSLGVILYTMLSGQVPF 209
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 39 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGE 96
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 97 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---- 147
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + + GT Y+SPE + S+ S
Sbjct: 148 -----HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS---------S 193
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 194 DLWALGCIIYQLVAGLPPF 212
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 38 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGE 95
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 96 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 147
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + + GT Y+SPE + S+ S
Sbjct: 148 ------IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS---------S 192
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 193 DLWALGCIIYQLVAGLPPF 211
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 31/210 (14%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME-- 341
K L K +D +T+ ++EV LL +L+ P +++ +D + D + LY++ME
Sbjct: 32 KILVWKELDYGSMTEAE-KQMLVSEVNLLRELKH-PNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 342 KGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIH-----AAGIIHSDLKPANF 396
+G S + + L ++ +M ++ LA+KE H ++H DLKPAN
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMT--QLTLALKECHRRSDGGHTVLHRDLKPANV 147
Query: 397 LFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGG 456
G NV K+ DFG+A L D TS K GT YMSPE + S +
Sbjct: 148 FLDGK--------QNV-KLGDFGLARILNHD-TSFAK-AFVGTPYYMSPEQMNRMSYNE- 195
Query: 457 GNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
KSD+WSLGC+LY + P++
Sbjct: 196 --------KSDIWSLGCLLYELCALMPPFT 217
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D +Y+++E
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDAT--RVYLILEYAP- 92
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 93 -LGTVYRELQKLSKFDEQRTATYI--TELANALSYCHSKRVIHRDIKPENLL-LGS---- 144
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG +C S + T SGTL+Y+ PE G+
Sbjct: 145 ----AGELKIADFGWSC----HAPSSRRTTLSGTLDYLPPEMIEGRMHDE---------- 186
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPF 207
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 107/235 (45%), Gaps = 29/235 (12%)
Query: 306 LNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN-LNKMTTLPNTM 364
L ++++ + CP+ + + ++ +++ E DT L K+ + ++K T+P +
Sbjct: 80 LXDLDISXRTVDCPFTVTFYGALFREGD--VWICXELXDTSLDKFYKQVIDKGQTIPEDI 137
Query: 365 IIIIMHWYEMLLAVKEIHAA-GIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACS 423
+ I ++ A++ +H+ +IH D+KP+N L I+ +G V K DFGI+
Sbjct: 138 LGKIA--VSIVKALEHLHSKLSVIHRDVKPSNVL--------INALGQV-KXCDFGISGY 186
Query: 424 LQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRT 483
L DD V KD +G Y +PE + G + KSD+WSLG + R
Sbjct: 187 LVDD---VAKDIDAGCKPYXAPERINPELNQKG-----YSVKSDIWSLGITXIELAILRF 238
Query: 484 PYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
PY + ++ + E PQL + + CL+K+ K RPT
Sbjct: 239 PYDSWGTPFQQLKQVVE-----EPSPQLPAD-KFSAEFVDFTSQCLKKNSKERPT 287
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 37 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGE 94
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 95 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---- 145
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + + GT Y+SPE + S+ S
Sbjct: 146 -----HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS---------S 191
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 192 DLWALGCIIYQLVAGLPPF 210
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 36 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGE 93
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 94 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---- 144
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + + GT Y+SPE + S+ S
Sbjct: 145 -----HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS---------S 190
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 191 DLWALGCIIYQLVAGLPPF 209
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 306 LNEVELLAKLQGCPYVIKMHD-YVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTM 364
L +++++ K CPY+++ ++ +T LM L K M+ L
Sbjct: 71 LMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMT 130
Query: 365 IIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSL 424
+ I+ + L +KE H G+IH D+KP+N L +D G + K+ DFGI+ L
Sbjct: 131 VAIV----KALYYLKEKH--GVIHRDVKPSNIL--------LDERGQI-KLCDFGISGRL 175
Query: 425 QDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTP 484
DDK KD ++G YM+PE + Y I ++DVWSLG L + G+ P
Sbjct: 176 VDDKA---KDRSAGCAAYMAPERIDPPDPTK--PDYDI--RADVWSLGISLVELATGQFP 228
Query: 485 YSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
Y + + + + + E P L ++ +K CL KD + RP
Sbjct: 229 YKNCKTDFEVLTKVLQ-----EEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRP 276
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 62 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGE 119
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 120 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---- 170
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + ++ GT Y+SPE + S+ S
Sbjct: 171 -----HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKS---------S 216
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 217 DLWALGCIIYQLVAGLPPF 235
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L +
Sbjct: 61 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGC 118
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 119 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---- 169
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + ++ GT Y+SPE + S+S S
Sbjct: 170 -----HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKS---------S 215
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 216 DLWALGCIIYQLVAGLPPF 234
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 31/210 (14%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME-- 341
K L K +D +T+ ++EV LL +L+ P +++ +D + D + LY++ME
Sbjct: 32 KILVWKELDYGSMTEAE-KQMLVSEVNLLRELKH-PNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 342 KGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIH-----AAGIIHSDLKPANF 396
+G S + + L ++ +M ++ LA+KE H ++H DLKPAN
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMT--QLTLALKECHRRSDGGHTVLHRDLKPANV 147
Query: 397 LFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGG 456
G NV K+ DFG+A L D+ + GT YMSPE + S +
Sbjct: 148 FLDGK--------QNV-KLGDFGLARILNHDEDFAKE--FVGTPYYMSPEQMNRMSYNE- 195
Query: 457 GNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
KSD+WSLGC+LY + P++
Sbjct: 196 --------KSDIWSLGCLLYELCALMPPFT 217
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 47/232 (20%)
Query: 319 PYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAV 378
P+V+ H + D +YV++E + K T P + + + V
Sbjct: 102 PHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFM----RQTIQGV 155
Query: 379 KEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASG 438
+ +H +IH DLK N LF+ + + + KI DFG+A ++ D K T G
Sbjct: 156 QYLHNNRVIHRDLKLGN-LFLNDDMDV--------KIGDFGLATKIEFDGE--RKKTLCG 204
Query: 439 TLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY--SHIPNTWAKM- 495
T NY++PE + S ++ D+WSLGCILY ++ G+ P+ S + T+ ++
Sbjct: 205 TPNYIAPEVLCKKGHS---------FEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIK 255
Query: 496 ---LAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVT 544
++ RH I P ++ L DP RP+V +T
Sbjct: 256 KNEYSVPRH---------------INPVASALIRRMLHADPTLRPSVAELLT 292
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 59 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGE 116
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 117 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---- 167
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + + GT Y+SPE + S+ S
Sbjct: 168 -----HIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKS---------S 213
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 214 DLWALGCIIYQLVAGLPPF 232
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 59 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGE 116
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 117 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---- 167
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + + GT Y+SPE + S+ S
Sbjct: 168 -----HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS---------S 213
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 214 DLWALGCIIYQLVAGLPPF 232
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 61 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGE 118
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 119 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---- 169
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + + GT Y+SPE + S+ S
Sbjct: 170 -----HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS---------S 215
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 216 DLWALGCIIYQLVAGLPPF 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 59 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGE 116
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 117 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---- 167
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + + GT Y+SPE + S+ S
Sbjct: 168 -----HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS---------S 213
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 214 DLWALGCIIYQLVAGLPPF 232
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
+ A+K+++ I ++ E +++++L P+ +K++ + + K + L
Sbjct: 55 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAK 112
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
+ +L KY+R + E++ A++ +H GIIH DLKP N L ++
Sbjct: 113 NGELLKYIRKIGSFDETCTRFYTA-----EIVSALEYLHGKGIIHRDLKPENILLNEDM- 166
Query: 404 KIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRIT 463
++I DFG A L + ++ GT Y+SPE + S+
Sbjct: 167 --------HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKS------- 211
Query: 464 YKSDVWSLGCILYNMIYGRTPY 485
SD+W+LGCI+Y ++ G P+
Sbjct: 212 --SDLWALGCIIYQLVAGLPPF 231
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 66 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FCFQDDEKLYFGLSYAKNGE 123
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 124 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---- 174
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + + GT Y+SPE + S+ S
Sbjct: 175 -----HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS---------S 220
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 221 DLWALGCIIYQLVAGLPPF 239
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 62 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGE 119
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 120 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---- 170
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + + GT Y+SPE + S+ S
Sbjct: 171 -----HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS---------S 216
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 217 DLWALGCIIYQLVAGLPPF 235
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 59 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGE 116
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 117 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---- 167
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + + GT Y+SPE + S+ S
Sbjct: 168 -----HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS---------S 213
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 214 DLWALGCIIYQLVAGLPPF 232
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 61 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGE 118
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 119 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---- 169
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + + GT Y+SPE + S+ S
Sbjct: 170 -----HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK---------SS 215
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 216 DLWALGCIIYQLVAGLPPF 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 61 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGE 118
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 119 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 170
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + + GT Y+SPE + S+ S
Sbjct: 171 ------IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS---------S 215
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 216 DLWALGCIIYQLVAGLPPF 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 61 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGE 118
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 119 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---- 169
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + + GT Y+SPE + S+ S
Sbjct: 170 -----HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS---------S 215
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 216 DLWALGCIIYQLVAGLPPF 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 64 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGE 121
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 122 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---- 172
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + + GT Y+SPE + S+ S
Sbjct: 173 -----HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK---------SS 218
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 219 DLWALGCIIYQLVAGLPPF 237
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 34/171 (19%)
Query: 319 PYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMII----IIMHWYEM 374
P+++K+H Y + T K LY++++ ++R + T L ++ + + E+
Sbjct: 86 PFIVKLH-YAFQTEGK-LYLILD--------FLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 375 LLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKD 434
LA+ +H+ GII+ DLKP N L +D G++ K+ DFG++ D + +
Sbjct: 136 ALALDHLHSLGIIYRDLKPENIL--------LDEEGHI-KLTDFGLSKESIDHEKKAY-- 184
Query: 435 TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GT+ YM+PE + T +D WS G +++ M+ G P+
Sbjct: 185 SFCGTVEYMAPEVVNRRGH---------TQSADWWSFGVLMFEMLTGTLPF 226
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 61 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGE 118
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 119 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---- 169
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + + GT Y+SPE + S+ S
Sbjct: 170 -----HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXK---------SS 215
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 216 DLWALGCIIYQLVAGLPPF 234
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K+++ I ++ E +++++L P+ +K++ + + K + L + +
Sbjct: 43 AIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAKNGE 100
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L KY+R + + E++ A++ +H GIIH DLKP N L ++
Sbjct: 101 LLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---- 151
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
++I DFG A L + + GT Y+SPE + S+ S
Sbjct: 152 -----HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS---------S 197
Query: 467 DVWSLGCILYNMIYGRTPY 485
D+W+LGCI+Y ++ G P+
Sbjct: 198 DLWALGCIIYQLVAGLPPF 216
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 123/277 (44%), Gaps = 57/277 (20%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME---KG 343
AL + + + + Y+ E+E+LA PY++K+ Y L++++E G
Sbjct: 45 ALAAAKVIETKSEEELEDYIVEIEILATCDH-PYIVKLLGAYYHDGK--LWIMIEFCPGG 101
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
D M L++ T P ++ +ML A+ +H+ IIH DLK GNVL
Sbjct: 102 AVD--AIMLELDRGLTEPQIQVVC----RQMLEALNFLHSKRIIHRDLK------AGNVL 149
Query: 404 KIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRIT 463
++ G++ ++ DFG+ S ++ KT +D+ GT +M+PE + Y
Sbjct: 150 MTLE--GDI-RLADFGV--SAKNLKTLQKRDSFIGTPYWMAPEVV--MCETMKDTPY--D 200
Query: 464 YKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQ 523
YK+D+WSLG L M P+ H N +L IA+ PPTLL
Sbjct: 201 YKADIWSLGITLIEMAQIEPPH-HELNPMRVLLKIAKSD---------------PPTLLT 244
Query: 524 S----------MKLCLQKDPKARPTVGNSVTQINNNP 550
+K+ L K+P+ RP S Q+ +P
Sbjct: 245 PSKWSVEFRDFLKIALDKNPETRP----SAAQLLEHP 277
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 34/171 (19%)
Query: 319 PYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMII----IIMHWYEM 374
P+V+K+H Y + T K LY++++ ++R + T L ++ + + E+
Sbjct: 90 PFVVKLH-YAFQTEGK-LYLILD--------FLRGGDLFTRLSKEVMFTEEDVKFYLAEL 139
Query: 375 LLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKD 434
L + +H+ GII+ DLKP N L +D G++ K+ DFG++ D + +
Sbjct: 140 ALGLDHLHSLGIIYRDLKPENIL--------LDEEGHI-KLTDFGLSKEAIDHEKKAY-- 188
Query: 435 TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GT+ YM+PE + S + +D WS G +++ M+ G P+
Sbjct: 189 SFCGTVEYMAPEVVNRQGHS---------HSADWWSYGVLMFEMLTGSLPF 230
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 123/277 (44%), Gaps = 57/277 (20%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME---KG 343
AL + + + + Y+ E+E+LA PY++K+ Y L++++E G
Sbjct: 37 ALAAAKVIETKSEEELEDYIVEIEILATCDH-PYIVKLLGAYYHDGK--LWIMIEFCPGG 93
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
D M L++ T P ++ +ML A+ +H+ IIH DLK GNVL
Sbjct: 94 AVD--AIMLELDRGLTEPQIQVVC----RQMLEALNFLHSKRIIHRDLK------AGNVL 141
Query: 404 KIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRIT 463
++ G++ ++ DFG+ S ++ KT +D+ GT +M+PE + Y
Sbjct: 142 MTLE--GDI-RLADFGV--SAKNLKTLQKRDSFIGTPYWMAPEVV--MCETMKDTPY--D 192
Query: 464 YKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQ 523
YK+D+WSLG L M P+ H N +L IA+ PPTLL
Sbjct: 193 YKADIWSLGITLIEMAQIEPPH-HELNPMRVLLKIAKSD---------------PPTLLT 236
Query: 524 S----------MKLCLQKDPKARPTVGNSVTQINNNP 550
+K+ L K+P+ RP S Q+ +P
Sbjct: 237 PSKWSVEFRDFLKIALDKNPETRP----SAAQLLEHP 269
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 25/202 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
+ A+K+++ I ++ E +++++L P+ +K++ + + K + L
Sbjct: 55 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY-FTFQDDEKLYFGLSYAK 112
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
+ +L KY+R + E++ A++ +H GIIH DLKP N L ++
Sbjct: 113 NGELLKYIRKIGSFDETCTRFYTA-----EIVSALEYLHGKGIIHRDLKPENILLNEDM- 166
Query: 404 KIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRIT 463
++I DFG A L + + GT Y+SPE + S+
Sbjct: 167 --------HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS------- 211
Query: 464 YKSDVWSLGCILYNMIYGRTPY 485
SD+W+LGCI+Y ++ G P+
Sbjct: 212 --SDLWALGCIIYQLVAGLPPF 231
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 122/258 (47%), Gaps = 44/258 (17%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMH-DYVYDTASKHLYVLME- 341
K +A+K++DL + D+ E+ +L++ PYV K + Y+ DT L+++ME
Sbjct: 33 KVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCD-SPYVTKYYGSYLKDTK---LWIIMEY 86
Query: 342 -KGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG 400
G + L +L + L T I I+ E+L + +H+ IH D+K AN L
Sbjct: 87 LGGGSAL-----DLLEPGPLDETQIATILR--EILKGLDYLHSEKKIHRDIKAANVLLSE 139
Query: 401 NVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTY 460
+ G V K+ DFG+A L D T + ++T GT +M+PE Q++
Sbjct: 140 H--------GEV-KLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIKQSAYDS----- 183
Query: 461 RITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
K+D+WSLG + G P+S + + + I ++ P L N + P
Sbjct: 184 ----KADIWSLGITAIELARGEPPHSEL-HPMKVLFLIPKNN-----PPTLEGNYSKP-- 231
Query: 521 LLQSMKLCLQKDPKARPT 538
L + ++ CL K+P RPT
Sbjct: 232 LKEFVEACLNKEPSFRPT 249
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 34/171 (19%)
Query: 319 PYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMII----IIMHWYEM 374
P+++K+H Y + T K LY++++ ++R + T L ++ + + E+
Sbjct: 86 PFIVKLH-YAFQTEGK-LYLILD--------FLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 375 LLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKD 434
LA+ +H+ GII+ DLKP N L +D G++ K+ DFG++ D + +
Sbjct: 136 ALALDHLHSLGIIYRDLKPENIL--------LDEEGHI-KLTDFGLSKESIDHEKKAY-- 184
Query: 435 TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GT+ YM+PE + T +D WS G +++ M+ G P+
Sbjct: 185 SFCGTVEYMAPEVVNRRGH---------TQSADWWSFGVLMFEMLTGTLPF 226
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 34/171 (19%)
Query: 319 PYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMII----IIMHWYEM 374
P+++K+H Y + T K LY++++ ++R + T L ++ + + E+
Sbjct: 87 PFIVKLH-YAFQTEGK-LYLILD--------FLRGGDLFTRLSKEVMFTEEDVKFYLAEL 136
Query: 375 LLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKD 434
LA+ +H+ GII+ DLKP N L +D G++ K+ DFG++ D + +
Sbjct: 137 ALALDHLHSLGIIYRDLKPENIL--------LDEEGHI-KLTDFGLSKESIDHEKKAY-- 185
Query: 435 TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GT+ YM+PE + T +D WS G +++ M+ G P+
Sbjct: 186 SFCGTVEYMAPEVVNRRGH---------TQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 122/258 (47%), Gaps = 44/258 (17%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMH-DYVYDTASKHLYVLME- 341
K +A+K++DL + D+ E+ +L++ PYV K + Y+ DT L+++ME
Sbjct: 53 KVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCD-SPYVTKYYGSYLKDT---KLWIIMEY 106
Query: 342 -KGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG 400
G + L +L + L T I I+ E+L + +H+ IH D+K AN L
Sbjct: 107 LGGGSAL-----DLLEPGPLDETQIATILR--EILKGLDYLHSEKKIHRDIKAANVLLSE 159
Query: 401 NVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTY 460
+ G V K+ DFG+A L D T + ++T GT +M+PE Q++
Sbjct: 160 H--------GEV-KLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIKQSAYDS----- 203
Query: 461 RITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
K+D+WSLG + G P+S + + + I ++ P L N + P
Sbjct: 204 ----KADIWSLGITAIELARGEPPHSEL-HPMKVLFLIPKNN-----PPTLEGNYSKP-- 251
Query: 521 LLQSMKLCLQKDPKARPT 538
L + ++ CL K+P RPT
Sbjct: 252 LKEFVEACLNKEPSFRPT 269
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 44/252 (17%)
Query: 306 LNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMI 365
LNE ++L K+ +V+ + Y Y+T VL DL ++ ++ + P
Sbjct: 232 LNEKQILEKVNS-RFVVSLA-YAYETKDALCLVLTLMNGGDLKFHIYHMGQ-AGFPEARA 288
Query: 366 IIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQ 425
+ + E+ ++++H I++ DLKP N L +D G++ +I D G+A +
Sbjct: 289 VF--YAAEICCGLEDLHRERIVYRDLKPENIL--------LDDHGHI-RISDLGLAVHVP 337
Query: 426 DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ +T + GT+ YM+PE R T+ D W+LGC+LY MI G++P+
Sbjct: 338 EGQTIKGR---VGTVGYMAPEVV---------KNERYTFSPDWWALGCLLYEMIAGQSPF 385
Query: 486 SHIPNTWAKMLAIARHKDQI------EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTV 539
K + R ++ F PQ + L S LC KDP R
Sbjct: 386 QQRKKK-IKREEVERLVKEVPEEYSERFSPQARS--------LCSQLLC--KDPAERLGC 434
Query: 540 -GNSVTQINNNP 550
G S ++ +P
Sbjct: 435 RGGSAREVKEHP 446
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 44/252 (17%)
Query: 306 LNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMI 365
LNE ++L K+ +V+ + Y Y+T VL DL ++ ++ + P
Sbjct: 232 LNEKQILEKVNS-RFVVSLA-YAYETKDALCLVLTLMNGGDLKFHIYHMGQ-AGFPEARA 288
Query: 366 IIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQ 425
+ + E+ ++++H I++ DLKP N L +D G++ +I D G+A +
Sbjct: 289 VF--YAAEICCGLEDLHRERIVYRDLKPENIL--------LDDHGHI-RISDLGLAVHVP 337
Query: 426 DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ +T + GT+ YM+PE R T+ D W+LGC+LY MI G++P+
Sbjct: 338 EGQTIKGR---VGTVGYMAPEVV---------KNERYTFSPDWWALGCLLYEMIAGQSPF 385
Query: 486 SHIPNTWAKMLAIARHKDQI------EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTV 539
K + R ++ F PQ + L S LC KDP R
Sbjct: 386 QQRKKK-IKREEVERLVKEVPEEYSERFSPQARS--------LCSQLLC--KDPAERLGC 434
Query: 540 -GNSVTQINNNP 550
G S ++ +P
Sbjct: 435 RGGSAREVKEHP 446
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 71/150 (47%), Gaps = 28/150 (18%)
Query: 336 LYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPAN 395
Y++M TDL K M++ L I ++ Y+ML ++ IHAAGIIH DLKP
Sbjct: 105 FYLVMPFMGTDLGKLMKH----EKLGEDRIQFLV--YQMLKGLRYIHAAGIIHRDLKP-- 156
Query: 396 FLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSG 455
GN+ DC LKI+DFG+A + T Y +PE
Sbjct: 157 ----GNLAVNEDC---ELKILDFGLARQADSEMXG-----XVVTRWYRAPEVI------- 197
Query: 456 GGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
N R T D+WS+GCI+ MI G+T +
Sbjct: 198 -LNWMRYTQTVDIWSVGCIMAEMITGKTLF 226
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 47/232 (20%)
Query: 319 PYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAV 378
P+V+ H + D +YV++E + K T P + + + V
Sbjct: 102 PHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFM----RQTIQGV 155
Query: 379 KEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASG 438
+ +H +IH DLK N LF+ + + + KI DFG+A ++ D K G
Sbjct: 156 QYLHNNRVIHRDLKLGN-LFLNDDMDV--------KIGDFGLATKIEFDGE--RKKXLCG 204
Query: 439 TLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY--SHIPNTWAKM- 495
T NY++PE + S ++ D+WSLGCILY ++ G+ P+ S + T+ ++
Sbjct: 205 TPNYIAPEVLCKKGHS---------FEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIK 255
Query: 496 ---LAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVT 544
++ RH I P ++ L DP RP+V +T
Sbjct: 256 KNEYSVPRH---------------INPVASALIRRMLHADPTLRPSVAELLT 292
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 314 KLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYE 373
KL P++IK++D + T + +++E +L Y+ +MT + +
Sbjct: 64 KLLRHPHIIKLYDVI--TTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRF-----FQQ 116
Query: 374 MLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHK 433
++ A++ H I+H DLKP N L N+ NV KI DFG++ + D
Sbjct: 117 IICAIEYCHRHKIVHRDLKPENLLLDDNL--------NV-KIADFGLSNIMTDGN---FL 164
Query: 434 DTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY--SHIPNT 491
T+ G+ NY +PE +G + DVWS G +LY M+ GR P+ IPN
Sbjct: 165 KTSCGSPNYAAPEVINGKLYAGP--------EVDVWSCGIVLYVMLVGRLPFDDEFIPNL 216
Query: 492 WAKM 495
+ K+
Sbjct: 217 FKKV 220
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 47/232 (20%)
Query: 319 PYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAV 378
P+V+ H + D +YV++E + K T P + + + V
Sbjct: 86 PHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFM----RQTIQGV 139
Query: 379 KEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASG 438
+ +H +IH DLK N LF+ + + + KI DFG+A ++ D K G
Sbjct: 140 QYLHNNRVIHRDLKLGN-LFLNDDMDV--------KIGDFGLATKIEFDGE--RKKDLCG 188
Query: 439 TLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY--SHIPNTWAKM- 495
T NY++PE + S ++ D+WSLGCILY ++ G+ P+ S + T+ ++
Sbjct: 189 TPNYIAPEVLCKKGHS---------FEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIK 239
Query: 496 ---LAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVT 544
++ RH I P ++ L DP RP+V +T
Sbjct: 240 KNEYSVPRH---------------INPVASALIRRMLHADPTLRPSVAELLT 276
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 47/232 (20%)
Query: 319 PYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAV 378
P+V+ H + D +YV++E + K T P + + + V
Sbjct: 102 PHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFM----RQTIQGV 155
Query: 379 KEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASG 438
+ +H +IH DLK N LF+ + + + KI DFG+A ++ D K G
Sbjct: 156 QYLHNNRVIHRDLKLGN-LFLNDDMDV--------KIGDFGLATKIEFDGE--RKKDLCG 204
Query: 439 TLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY--SHIPNTWAKM- 495
T NY++PE + S ++ D+WSLGCILY ++ G+ P+ S + T+ ++
Sbjct: 205 TPNYIAPEVLCKKGHS---------FEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIK 255
Query: 496 ---LAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVT 544
++ RH I P ++ L DP RP+V +T
Sbjct: 256 KNEYSVPRH---------------INPVASALIRRMLHADPTLRPSVAELLT 292
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D +Y+++E
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDATR--VYLILEYAP- 92
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 93 -LGTVYRELQKLSKFDEQRTATYI--TELANALSYCHSKRVIHRDIKPENLL-LGS---- 144
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S +DT GTL+Y+ PE G+
Sbjct: 145 ----AGELKIADFGWSV----HAPSSRRDTLCGTLDYLPPEMIEGRMHDE---------- 186
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPF 207
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 32/215 (14%)
Query: 327 YVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGI 386
+V +TA+K VL +L Y+ + ++++ ++ + +++ AV +H+ G
Sbjct: 75 HVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVV-----FRQIVSAVAYVHSQGY 129
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
H DLKP N LF + LK+IDFG+ C+ H T G+L Y +PE
Sbjct: 130 AHRDLKPENLLFDEY---------HKLKLIDFGL-CAKPKGNKDYHLQTCCGSLAYAAPE 179
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIE 506
S G ++DVWS+G +LY ++ G P+ N A I R K +
Sbjct: 180 LIQGKSYLGS--------EADVWSMGILLYVLMCGFLPFDD-DNVMALYKKIMRGKYDV- 229
Query: 507 FKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
P+ + +I LLQ M LQ DPK R ++ N
Sbjct: 230 --PKWLSPSSI--LLLQQM---LQVDPKKRISMKN 257
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 69/155 (44%), Gaps = 28/155 (18%)
Query: 385 GIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMS 444
+IH DLKP N L V G VLKI DFG AC +Q H G+ +M+
Sbjct: 126 ALIHRDLKPPNLLLVAG--------GTVLKICDFGTACDIQ-----THMTNNKGSAAWMA 172
Query: 445 PEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQ 504
PE G+ Y + K DV+S G IL+ +I R P+ I A + A H
Sbjct: 173 PEVF-------EGSNY--SEKCDVFSWGIILWEVITRRKPFDEIGGP-AFRIMWAVHNGT 222
Query: 505 IEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTV 539
+P L N +P + M C KDP RP++
Sbjct: 223 ---RPPLIKN--LPKPIESLMTRCWSKDPSQRPSM 252
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 44/259 (16%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMH-DYVYDTASKHLYVLME- 341
K +A+K++DL + D+ E+ +L++ PYV K + Y+ DT L+++ME
Sbjct: 48 KVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCD-SPYVTKYYGSYLKDTK---LWIIMEY 101
Query: 342 -KGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG 400
G + L +L + L T I I+ E+L + +H+ IH D+K AN L
Sbjct: 102 LGGGSAL-----DLLEPGPLDETQIATILR--EILKGLDYLHSEKKIHRDIKAANVLLSE 154
Query: 401 NVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTY 460
+ G V K+ DFG+A L D T + ++ GT +M+PE Q++
Sbjct: 155 H--------GEV-KLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSAYDS----- 198
Query: 461 RITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
K+D+WSLG + G P+S + + + I ++ P L N + P
Sbjct: 199 ----KADIWSLGITAIELARGEPPHSEL-HPMKVLFLIPKNN-----PPTLEGNYSKP-- 246
Query: 521 LLQSMKLCLQKDPKARPTV 539
L + ++ CL K+P RPT
Sbjct: 247 LKEFVEACLNKEPSFRPTA 265
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 69/155 (44%), Gaps = 28/155 (18%)
Query: 385 GIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMS 444
+IH DLKP N L V G VLKI DFG AC +Q H G+ +M+
Sbjct: 125 ALIHRDLKPPNLLLVAG--------GTVLKICDFGTACDIQ-----THMTNNKGSAAWMA 171
Query: 445 PEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQ 504
PE G+ Y + K DV+S G IL+ +I R P+ I A + A H
Sbjct: 172 PEVF-------EGSNY--SEKCDVFSWGIILWEVITRRKPFDEIGGP-AFRIMWAVHNGT 221
Query: 505 IEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTV 539
+P L N +P + M C KDP RP++
Sbjct: 222 ---RPPLIKN--LPKPIESLMTRCWSKDPSQRPSM 251
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D +Y+++E
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDAT--RVYLILEYAP- 117
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 118 -LGTVYRELQKLSKFDEQRTATYI--TELANALSYCHSKRVIHRDIKPENLL-LGS---- 169
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S +D GTL+Y+ PE G+
Sbjct: 170 ----AGELKIADFGWSVH----APSSRRDDLCGTLDYLPPEMIEGRMHDE---------- 211
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPF 232
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 121/258 (46%), Gaps = 44/258 (17%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMH-DYVYDTASKHLYVLME- 341
K +A+K++DL + D+ E+ +L++ PYV K + Y+ DT L+++ME
Sbjct: 33 KVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCD-SPYVTKYYGSYLKDTK---LWIIMEY 86
Query: 342 -KGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG 400
G + L +L + L T I I+ E+L + +H+ IH D+K AN L
Sbjct: 87 LGGGSAL-----DLLEPGPLDETQIATILR--EILKGLDYLHSEKKIHRDIKAANVLLSE 139
Query: 401 NVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTY 460
+ G V K+ DFG+A L D T + ++ GT +M+PE Q++
Sbjct: 140 H--------GEV-KLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSAYDS----- 183
Query: 461 RITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
K+D+WSLG + G P+S + + + I ++ P L N + P
Sbjct: 184 ----KADIWSLGITAIELARGEPPHSEL-HPMKVLFLIPKNN-----PPTLEGNYSKP-- 231
Query: 521 LLQSMKLCLQKDPKARPT 538
L + ++ CL K+P RPT
Sbjct: 232 LKEFVEACLNKEPSFRPT 249
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 31/212 (14%)
Query: 284 KPLALKVVDLSDITD------QSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLY 337
K A+K++D++ Q + ++ L EV++L K+ G P +I++ D Y+T +
Sbjct: 43 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD-TYETNTFFFL 101
Query: 338 V--LMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPAN 395
V LM+KG+ L Y L + TL IM +L + +H I+H DLKP N
Sbjct: 102 VFDLMKKGE--LFDY---LTEKVTLSEKETRKIMR--ALLEVICALHKLNIVHRDLKPEN 154
Query: 396 FLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSG 455
L +D N+ K+ DFG +C L + + GT +Y++PE S
Sbjct: 155 IL--------LDDDMNI-KLTDFGFSCQLDPGEKL---RSVCGTPSYLAPEI---IECSM 199
Query: 456 GGNTYRITYKSDVWSLGCILYNMIYGRTPYSH 487
N + D+WS G I+Y ++ G P+ H
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D +Y+++E
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDAT--RVYLILEYAP- 117
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 118 -LGTVYRELQKLSKFDEQRTATYI--TELANALSYCHSKRVIHRDIKPENLL-LGS---- 169
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + T GTL+Y+ PE G+
Sbjct: 170 ----AGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDE---------- 211
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPF 232
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 31/212 (14%)
Query: 284 KPLALKVVDLSDITD------QSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLY 337
K A+K++D++ Q + ++ L EV++L K+ G P +I++ D Y+T +
Sbjct: 43 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD-TYETNTFFFL 101
Query: 338 V--LMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPAN 395
V LM+KG+ L Y L + TL IM +L + +H I+H DLKP N
Sbjct: 102 VFDLMKKGE--LFDY---LTEKVTLSEKETRKIMR--ALLEVICALHKLNIVHRDLKPEN 154
Query: 396 FLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSG 455
L +D N+ K+ DFG +C L D + + GT +Y++PE S
Sbjct: 155 IL--------LDDDMNI-KLTDFGFSCQL-DPGEKLRE--VCGTPSYLAPEI---IECSM 199
Query: 456 GGNTYRITYKSDVWSLGCILYNMIYGRTPYSH 487
N + D+WS G I+Y ++ G P+ H
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D + +Y+++E
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHD--ATRVYLILEYAP- 95
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L N
Sbjct: 96 -LGTVYRELQKLSRFDEQRTATYI--TELANALSYCHSKRVIHRDIKPENLLLGSN---- 148
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S +DT GTL+Y+ PE G+
Sbjct: 149 -----GELKIADFGWSVH----APSSRRDTLCGTLDYLPPEMIEGRMHDE---------- 189
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G P+
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPF 210
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 31/212 (14%)
Query: 284 KPLALKVVDLSDITD------QSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLY 337
K A+K++D++ Q + ++ L EV++L K+ G P +I++ D Y+T +
Sbjct: 30 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD-TYETNTFFFL 88
Query: 338 V--LMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPAN 395
V LM+KG+ L Y L + TL IM +L + +H I+H DLKP N
Sbjct: 89 VFDLMKKGE--LFDY---LTEKVTLSEKETRKIMR--ALLEVICALHKLNIVHRDLKPEN 141
Query: 396 FLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSG 455
L ++ N+ K+ DFG +C L D + + GT +Y++PE S
Sbjct: 142 ILLDDDM--------NI-KLTDFGFSCQL-DPGEKLRE--VCGTPSYLAPEI---IECSM 186
Query: 456 GGNTYRITYKSDVWSLGCILYNMIYGRTPYSH 487
N + D+WS G I+Y ++ G P+ H
Sbjct: 187 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 218
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D +Y+++E
Sbjct: 53 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDAT--RVYLILEYAP- 108
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 109 -LGTVYRELQKLSKFDEQRTATYI--TELANALSYCHSKRVIHRDIKPENLL-LGS---- 160
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + T GTL+Y+ PE G+
Sbjct: 161 ----AGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDE---------- 202
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 203 KVDLWSLGVLCYEFLVGKPPF 223
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 123/274 (44%), Gaps = 46/274 (16%)
Query: 281 HEFKPLALKVVD-----LSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKH 335
HEF A+K+++ LS + + ++ E +L ++ G P++I + D Y+++S
Sbjct: 120 HEF---AVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID-SYESSSFM 175
Query: 336 LYV--LMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKP 393
V LM KG+ L Y L + L IM +L AV +HA I+H DLKP
Sbjct: 176 FLVFDLMRKGE--LFDY---LTEKVALSEKETRSIMR--SLLEAVSFLHANNIVHRDLKP 228
Query: 394 ANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE---AAGQ 450
N L N+ +++ DFG +C L+ + GT Y++PE +
Sbjct: 229 ENILLDDNM---------QIRLSDFGFSCHLEPGEKL---RELCGTPGYLAPEILKCSMD 276
Query: 451 TSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEF-KP 509
+ G G + D+W+ G IL+ ++ G P+ H + + + Q +F P
Sbjct: 277 ETHPGYGK------EVDLWACGVILFTLLAGSPPFWHRRQILMLRMIM---EGQYQFSSP 327
Query: 510 QLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ + + L+ + LQ DP+AR T ++
Sbjct: 328 EWDDRSSTVKDLISRL---LQVDPEARLTAEQAL 358
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 42/169 (24%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +LS+ ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 104 VYIVMELMDANLSQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS T Y +PE
Sbjct: 154 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMIYGRTPY---SHIPNTWAKML 496
G G YK D+WS+GCI+ MI G + HI + W K++
Sbjct: 198 -LGMG------YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVI 238
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 50/245 (20%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHD---YVYDTASKH-LYVL---MEKGDTDLSKYMRN-L 354
+S+L E +++ KL+ HD +Y S+ +Y++ M KG L ++++
Sbjct: 49 ESFLEEAQIMKKLK--------HDKLVQLYAVVSEEPIYIVTEYMNKGS--LLDFLKDGE 98
Query: 355 NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLK 414
+ LPN + + ++ + I IH DL+ AN L VGN G + K
Sbjct: 99 GRALKLPNLVDMAA----QVAAGMAYIERMNYIHRDLRSANIL-VGN--------GLICK 145
Query: 415 IIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCI 474
I DFG+A ++D++ + + A + + +PEAA R T KSDVWS G +
Sbjct: 146 IADFGLARLIEDNEXTA-RQGAKFPIKWTAPEAALYG---------RFTIKSDVWSFGIL 195
Query: 475 LYNMIY-GRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDP 533
L ++ GR PY + N ++L +Q+E ++ P +L + M C +KDP
Sbjct: 196 LTELVTKGRVPYPGMNNR--EVL------EQVERGYRMPCPQDCPISLHELMIHCWKKDP 247
Query: 534 KARPT 538
+ RPT
Sbjct: 248 EERPT 252
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D +Y+++E
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDATR--VYLILEYAP- 96
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 97 -LGTVYRELQKLSKFDEQRTATYI--TELANALSYCHSKRVIHRDIKPENLL-LGS---- 148
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + T GTL+Y+ PE G+
Sbjct: 149 ----AGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEXIEGRXHDE---------- 190
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPF 211
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 36/255 (14%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME---KG 343
A KV+D +++ + D Y+ E+++LA P ++K+ D Y +L++L+E G
Sbjct: 66 AAKVIDTK--SEEELED-YMVEIDILASCDH-PNIVKLLDAFY--YENNLWILIEFCAGG 119
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
D M L + T ++ + L A+ +H IIH DLK N LF
Sbjct: 120 AVD--AVMLELERPLTESQIQVVC----KQTLDALNYLHDNKIIHRDLKAGNILFT---- 169
Query: 404 KIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRIT 463
+ +K+ DFG+ S ++ +T +D+ GT +M+PE +S Y
Sbjct: 170 -----LDGDIKLADFGV--SAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD--RPY--D 218
Query: 464 YKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQ 523
YK+DVWSLG L M P+ H N +L IA+ + P LA
Sbjct: 219 YKADVWSLGITLIEMAEIEPPH-HELNPMRVLLKIAKSE-----PPTLAQPSRWSSNFKD 272
Query: 524 SMKLCLQKDPKARPT 538
+K CL+K+ AR T
Sbjct: 273 FLKKCLEKNVDARWT 287
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 52/174 (29%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 104 VYIVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A +GT M+PE +
Sbjct: 154 PSNIVVKS------DC---TLKILDFGLA-------------RTAGTSFMMTPEVVTRYY 191
Query: 453 SS-----GGGNTYRITYKS--DVWSLGCILYNMIYGRTPY---SHIPNTWAKML 496
+ G G YK D+WS+GCI+ MI G + HI + W K++
Sbjct: 192 RAPEVILGMG------YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVI 238
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 40/256 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A+K+++ I + E++ L KL P++IK++ V T S V+
Sbjct: 44 VAVKILNRQKIRSLDVVGKIRREIQNL-KLFRHPHIIKLYQ-VISTPSDIFMVMEYVSGG 101
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+ ++ + + + ++L V H ++H DLKP N L
Sbjct: 102 ELFDYICKNGRLDEKESRRL-----FQQILSGVDYCHRHMVVHRDLKPENVL-------- 148
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+D N KI DFG++ + D + + G+ NY +PE +G +
Sbjct: 149 LDAHMNA-KIADFGLSNMMSDGEFL---RXSCGSPNYAAPEVISGRLYAGP--------E 196
Query: 466 SDVWSLGCILYNMIYGRTPY--SHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQ 523
D+WS G ILY ++ G P+ H+P + K+ D I + PQ N P+++
Sbjct: 197 VDIWSSGVILYALLCGTLPFDDDHVPTLFKKIC------DGIFYTPQYLN-----PSVIS 245
Query: 524 SMKLCLQKDPKARPTV 539
+K LQ DP R T+
Sbjct: 246 LLKHMLQVDPMKRATI 261
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 28/194 (14%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDTDLSKYMRNLNKMTTLPNTMII 366
E+++L L+G P +I + D V D S+ ++ E +TD + + L
Sbjct: 81 EIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-------- 132
Query: 367 IIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQD 426
I + YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM--------IDHEHRKLRLIDWGLAEFYHP 184
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
+ + + + PE Y D+WSLGC+L +MI+ + P+
Sbjct: 185 GQEY---NVRVASRYFKGPELLVDYQMY--------DYSLDMWSLGCMLASMIFRKEPFF 233
Query: 487 HIPNTWAKMLAIAR 500
H + + +++ IA+
Sbjct: 234 HGHDNYDQLVRIAK 247
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D + +Y+++E
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHD--ATRVYLILEYAP- 91
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 92 -LGTVYRELQKLSKFDEQRTATYI--TELANALSYCHSKRVIHRDIKPENLL-LGS---- 143
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + T GTL+Y+ PE G+
Sbjct: 144 ----AGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDE---------- 185
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF 206
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D + +Y+++E
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHD--ATRVYLILEYAP- 94
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 95 -LGTVYRELQKLSKFDEQRTATYI--TELANALSYCHSKRVIHRDIKPENLL-LGS---- 146
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + T GTL+Y+ PE G+
Sbjct: 147 ----AGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDE---------- 188
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPF 209
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D + +Y+++E
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHD--ATRVYLILEYAP- 96
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 97 -LGTVYRELQKLSKFDEQRTATYI--TELANALSYCHSKRVIHRDIKPENLL-LGS---- 148
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + T GTL+Y+ PE G+
Sbjct: 149 ----AGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDE---------- 190
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPF 211
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 42/169 (24%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +LS+ ++ + +M+ L Y+ML+ +K +H+AGIIH DLK
Sbjct: 104 VYIVMELMDANLSQVIQMELDHERMSYL----------LYQMLVGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + + LKI+DFG+A + TS T Y +PE
Sbjct: 154 PSNIVVKSDA---------TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMIYGRTPY---SHIPNTWAKML 496
G G YK D+WS+GCI+ MI G + HI + W K++
Sbjct: 198 -LGMG------YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVI 238
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 33/202 (16%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG-D 344
LALKV+ + + + EVE+ + L+ P +++++ Y +D +Y+++E
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDATR--VYLILEYAPR 97
Query: 345 TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLK 404
++ K ++ L+K I E+ A+ H+ +IH D+KP N L +G+
Sbjct: 98 GEVYKELQKLSKFDEQRTATYIT-----ELANALSYCHSKRVIHRDIKPENLL-LGS--- 148
Query: 405 IIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRIT 463
LKI DFG + S + T GTL+Y+ PE G+
Sbjct: 149 -----AGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDE--------- 190
Query: 464 YKSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 191 -KVDLWSLGVLCYEFLVGKPPF 211
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 120/277 (43%), Gaps = 50/277 (18%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQ--GCPYVIKMHDYVYDTASKHLYVLME 341
K A+K +D I + LNE +L+ + CP+++ M Y + T K ++L
Sbjct: 215 KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCM-SYAFHTPDKLSFILDL 273
Query: 342 KGDTDLSKYMRNLNKMTTLPNTMIIIIMHWY--EMLLAVKEIHAAGIIHSDLKPANFLFV 399
DL ++ + M +Y E++L ++ +H +++ DLKPAN L
Sbjct: 274 MNGGDLHYHLSQHGVFSEAD-------MRFYAAEIILGLEHMHNRFVVYRDLKPANIL-- 324
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNT 459
+D G+V +I D G+AC K + GT YM+PE + G
Sbjct: 325 ------LDEHGHV-RISDLGLACDFSKKKPH----ASVGTHGYMAPEVLQK------GVA 367
Query: 460 YRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEF-KPQLANNVTIP 518
Y + +D +SLGC+L+ ++ G +P+ + KD+ E + L V +P
Sbjct: 368 YDSS--ADWFSLGCMLFKLLRGHSPFRQ-----------HKTKDKHEIDRMTLTMAVELP 414
Query: 519 ----PTLLQSMKLCLQKDPKAR-PTVGNSVTQINNNP 550
P L ++ LQ+D R +G ++ +P
Sbjct: 415 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 451
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 120/277 (43%), Gaps = 50/277 (18%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQ--GCPYVIKMHDYVYDTASKHLYVLME 341
K A+K +D I + LNE +L+ + CP+++ M Y + T K ++L
Sbjct: 214 KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCM-SYAFHTPDKLSFILDL 272
Query: 342 KGDTDLSKYMRNLNKMTTLPNTMIIIIMHWY--EMLLAVKEIHAAGIIHSDLKPANFLFV 399
DL ++ + M +Y E++L ++ +H +++ DLKPAN L
Sbjct: 273 MNGGDLHYHLSQHGVFSEAD-------MRFYAAEIILGLEHMHNRFVVYRDLKPANIL-- 323
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNT 459
+D G+V +I D G+AC K + GT YM+PE + G
Sbjct: 324 ------LDEHGHV-RISDLGLACDFSKKKPH----ASVGTHGYMAPEVLQK------GVA 366
Query: 460 YRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEF-KPQLANNVTIP 518
Y + +D +SLGC+L+ ++ G +P+ + KD+ E + L V +P
Sbjct: 367 YDSS--ADWFSLGCMLFKLLRGHSPFRQ-----------HKTKDKHEIDRMTLTMAVELP 413
Query: 519 ----PTLLQSMKLCLQKDPKAR-PTVGNSVTQINNNP 550
P L ++ LQ+D R +G ++ +P
Sbjct: 414 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 450
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E D
Sbjct: 34 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEHVDQ 89
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 90 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 138
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 139 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 186
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 187 AVDIWSLGCIFAEMVTRRALF 207
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D + +Y+++E
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHD--ATRVYLILEYAP- 94
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 95 -LGTVYRELQKLSKFDEQRTATYIT--ELANALSYCHSKRVIHRDIKPENLL-LGS---- 146
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S +D GTL+Y+ PE G+
Sbjct: 147 ----AGELKIADFGWSVH----APSSRRDDLCGTLDYLPPEMIEGRMHDE---------- 188
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPF 209
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 120/277 (43%), Gaps = 50/277 (18%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQ--GCPYVIKMHDYVYDTASKHLYVLME 341
K A+K +D I + LNE +L+ + CP+++ M Y + T K ++L
Sbjct: 215 KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCM-SYAFHTPDKLSFILDL 273
Query: 342 KGDTDLSKYMRNLNKMTTLPNTMIIIIMHWY--EMLLAVKEIHAAGIIHSDLKPANFLFV 399
DL ++ + M +Y E++L ++ +H +++ DLKPAN L
Sbjct: 274 MNGGDLHYHLSQHGVFSEAD-------MRFYAAEIILGLEHMHNRFVVYRDLKPANIL-- 324
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNT 459
+D G+V +I D G+AC K + GT YM+PE + G
Sbjct: 325 ------LDEHGHV-RISDLGLACDFSKKKPH----ASVGTHGYMAPEVLQK------GVA 367
Query: 460 YRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEF-KPQLANNVTIP 518
Y + +D +SLGC+L+ ++ G +P+ + KD+ E + L V +P
Sbjct: 368 YDSS--ADWFSLGCMLFKLLRGHSPFRQ-----------HKTKDKHEIDRMTLTMAVELP 414
Query: 519 ----PTLLQSMKLCLQKDPKAR-PTVGNSVTQINNNP 550
P L ++ LQ+D R +G ++ +P
Sbjct: 415 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 451
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 120/277 (43%), Gaps = 50/277 (18%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQ--GCPYVIKMHDYVYDTASKHLYVLME 341
K A+K +D I + LNE +L+ + CP+++ M Y + T K ++L
Sbjct: 215 KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCM-SYAFHTPDKLSFILDL 273
Query: 342 KGDTDLSKYMRNLNKMTTLPNTMIIIIMHWY--EMLLAVKEIHAAGIIHSDLKPANFLFV 399
DL ++ + M +Y E++L ++ +H +++ DLKPAN L
Sbjct: 274 MNGGDLHYHLSQHGVFSEAD-------MRFYAAEIILGLEHMHNRFVVYRDLKPANIL-- 324
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNT 459
+D G+V +I D G+AC K + GT YM+PE + G
Sbjct: 325 ------LDEHGHV-RISDLGLACDFSKKKPH----ASVGTHGYMAPEVLQK------GVA 367
Query: 460 YRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEF-KPQLANNVTIP 518
Y + +D +SLGC+L+ ++ G +P+ + KD+ E + L V +P
Sbjct: 368 YDSS--ADWFSLGCMLFKLLRGHSPFRQ-----------HKTKDKHEIDRMTLTMAVELP 414
Query: 519 ----PTLLQSMKLCLQKDPKAR-PTVGNSVTQINNNP 550
P L ++ LQ+D R +G ++ +P
Sbjct: 415 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 451
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 42/169 (24%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 104 VYIVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS T Y +PE
Sbjct: 154 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMIYGRTPY---SHIPNTWAKML 496
G G YK D+WS+GCI+ MI G + HI + W K++
Sbjct: 198 -LGMG------YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVI 238
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 42/169 (24%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 106 VYIVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 155
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS T Y +PE
Sbjct: 156 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMVPFVVTRYYRAPEVI---- 199
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMIYGRTPY---SHIPNTWAKML 496
G G YK D+WS+GCI+ MI G + HI + W K++
Sbjct: 200 -LGMG------YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVI 240
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 42/169 (24%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 104 VYIVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS T Y +PE
Sbjct: 154 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMIYGRTPY---SHIPNTWAKML 496
G G YK D+WS+GCI+ MI G + HI + W K++
Sbjct: 198 -LGMG------YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVI 238
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 42/169 (24%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +LS+ ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 104 VYIVMELMDANLSQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + + LKI+DFG+A + TS T Y +PE
Sbjct: 154 PSNIVVKSDA---------TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMIYGRTPY---SHIPNTWAKML 496
G G YK D+WS+GCI+ MI G + HI + W K++
Sbjct: 198 -LGMG------YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVI 238
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 46/243 (18%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN--LNKMTTL 360
D++L E L+ +LQ +++++ V + +Y++ E YM N L
Sbjct: 61 DAFLAEANLMKQLQH-QRLVRLYAVV---TQEPIYIITE--------YMENGSLVDFLKT 108
Query: 361 PNTMIIIIMHWYEMLLAVKE----IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
P+ + + I +M + E I IH DL+ AN L V + C KI
Sbjct: 109 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL----VSDTLSC-----KIA 159
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG+A ++D++ + ++ A + + +PEA N T KSDVWS G +L
Sbjct: 160 DFGLARLIEDNEXTA-REGAKFPIKWTAPEAI---------NYGTFTIKSDVWSFGILLT 209
Query: 477 NMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKA 535
++ +GR PY + N +E ++ P L Q M+LC ++ P+
Sbjct: 210 EIVTHGRIPYPGMTN--------PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPED 261
Query: 536 RPT 538
RPT
Sbjct: 262 RPT 264
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 42/169 (24%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +LS+ ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 104 VYIVMELMDANLSQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + + LKI+DFG+A + TS T Y +PE
Sbjct: 154 PSNIVVKSDA---------TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMIYGRTPY---SHIPNTWAKML 496
G G YK D+WS+GCI+ MI G + HI + W K++
Sbjct: 198 -LGMG------YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVI 238
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 117/241 (48%), Gaps = 43/241 (17%)
Query: 306 LNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL-MEKGDTDLSKYMRNLNKMTTLPNTM 364
L+E+ +L + CP VI +H+ VY+ S+ + +L G S + L +M + N +
Sbjct: 76 LHEIAVLELAKSCPRVINLHE-VYENTSEIILILEYAAGGEIFSLCLPELAEMVS-ENDV 133
Query: 365 IIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGI---- 420
I +I ++L V +H I+H DLKP N L L I +G++ KI+DFG+
Sbjct: 134 IRLIK---QILEGVYYLHQNNIVHLDLKPQNIL-----LSSIYPLGDI-KIVDFGMSRKI 184
Query: 421 --ACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNM 478
AC L++ GT Y++PE N IT +D+W++G I Y +
Sbjct: 185 GHACELRE---------IMGTPEYLAPEIL---------NYDPITTATDMWNIGIIAYML 226
Query: 479 IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVT-IPPTLLQSMKLCLQKDPKARP 537
+ +P+ N L I+ + +++ + ++V+ + +QS+ L K+P+ RP
Sbjct: 227 LTHTSPFVGEDNQ-ETYLNIS--QVNVDYSEETFSSVSQLATDFIQSL---LVKNPEKRP 280
Query: 538 T 538
T
Sbjct: 281 T 281
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 42/169 (24%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 105 VYIVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 154
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS T Y +PE
Sbjct: 155 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 198
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMIYGRTPY---SHIPNTWAKML 496
G G YK D+WS+GCI+ MI G + HI + W K++
Sbjct: 199 -LGMG------YKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVI 239
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D + +Y+++E
Sbjct: 35 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHD--ATRVYLILEYAP- 90
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 91 -LGTVYRELQKLSKFDEQRTATYIT--ELANALSYCHSKRVIHRDIKPENLL-LGS---- 142
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + T GTL+Y+ PE G+
Sbjct: 143 ----AGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDE---------- 184
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 185 KVDLWSLGVLCYEFLVGKPPF 205
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D +Y+++E
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDATR--VYLILEYAP- 94
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 95 -LGTVYRELQKLSKFDEQRTATYIT--ELANALSYCHSKRVIHRDIKPENLL-LGS---- 146
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + T GTL+Y+ PE G+
Sbjct: 147 ----AGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDE---------- 188
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPF 209
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D + +Y+++E
Sbjct: 40 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHD--ATRVYLILEYAP- 95
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 96 -LGTVYRELQKLSKFDEQRTATYIT--ELANALSYCHSKRVIHRDIKPENLL-LGS---- 147
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + T GTL+Y+ PE G+
Sbjct: 148 ----AGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDE---------- 189
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 190 KVDLWSLGVLCYEFLVGKPPF 210
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D + +Y+++E
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHD--ATRVYLILEYAP- 95
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L N
Sbjct: 96 -LGTVYRELQKLSRFDEQRTATYI--TELANALSYCHSKRVIHRDIKPENLLLGSN---- 148
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + T GTL+Y+ PE G+
Sbjct: 149 -----GELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDE---------- 189
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G P+
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPF 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 46/243 (18%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN--LNKMTTL 360
D++L E L+ +LQ +++++ V + +Y++ E YM N L
Sbjct: 59 DAFLAEANLMKQLQH-QRLVRLYAVV---TQEPIYIITE--------YMENGSLVDFLKT 106
Query: 361 PNTMIIIIMHWYEMLLAVKE----IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
P+ + + I +M + E I IH DL+ AN L V + C KI
Sbjct: 107 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL----VSDTLSC-----KIA 157
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG+A ++D++ + ++ A + + +PEA N T KSDVWS G +L
Sbjct: 158 DFGLARLIEDNEXTA-REGAKFPIKWTAPEAI---------NYGTFTIKSDVWSFGILLT 207
Query: 477 NMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKA 535
++ +GR PY + N +E ++ P L Q M+LC ++ P+
Sbjct: 208 EIVTHGRIPYPGMTN--------PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPED 259
Query: 536 RPT 538
RPT
Sbjct: 260 RPT 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D + +Y+++E
Sbjct: 33 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHD--ATRVYLILEYAP- 88
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 89 -LGTVYRELQKLSKFDEQRTATYIT--ELANALSYCHSKRVIHRDIKPENLL-LGS---- 140
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + T GTL+Y+ PE G+
Sbjct: 141 ----AGELKIADFGWSVH----APSSRRTTLCGTLDYLPPEMIEGRMHDE---------- 182
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 183 KVDLWSLGVLCYEFLVGKPPF 203
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 36/255 (14%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME---KG 343
A KV+D +++ + D Y+ E+++LA P ++K+ D Y +L++L+E G
Sbjct: 66 AAKVIDTK--SEEELED-YMVEIDILASCDH-PNIVKLLDAFY--YENNLWILIEFCAGG 119
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
D M L + T ++ + L A+ +H IIH DLK N LF
Sbjct: 120 AVD--AVMLELERPLTESQIQVVC----KQTLDALNYLHDNKIIHRDLKAGNILFT---- 169
Query: 404 KIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRIT 463
+ +K+ DFG+ S ++ + +D+ GT +M+PE +S Y
Sbjct: 170 -----LDGDIKLADFGV--SAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKD--RPY--D 218
Query: 464 YKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQ 523
YK+DVWSLG L M P+ H N +L IA+ + P LA
Sbjct: 219 YKADVWSLGITLIEMAEIEPPH-HELNPMRVLLKIAKSE-----PPTLAQPSRWSSNFKD 272
Query: 524 SMKLCLQKDPKARPT 538
+K CL+K+ AR T
Sbjct: 273 FLKKCLEKNVDARWT 287
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D + +Y+++E
Sbjct: 38 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHD--ATRVYLILEYAP- 93
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 94 -LGTVYRELQKLSKFDEQRTATYI--TELANALSYCHSKRVIHRDIKPENLL-LGS---- 145
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI +FG + S + T GTL+Y+ PE G+
Sbjct: 146 ----AGELKIANFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDE---------- 187
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPF 208
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 46/243 (18%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN--LNKMTTL 360
D++L E L+ +LQ +++++ V + +Y++ E YM N L
Sbjct: 62 DAFLAEANLMKQLQH-QRLVRLYAVV---TQEPIYIITE--------YMENGSLVDFLKT 109
Query: 361 PNTMIIIIMHWYEMLLAVKE----IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
P+ + + I +M + E I IH DL+ AN L V + C KI
Sbjct: 110 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL----VSDTLSC-----KIA 160
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG+A ++D++ + ++ A + + +PEA N T KSDVWS G +L
Sbjct: 161 DFGLARLIEDNEXTA-REGAKFPIKWTAPEAI---------NYGTFTIKSDVWSFGILLT 210
Query: 477 NMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKA 535
++ +GR PY + N +E ++ P L Q M+LC ++ P+
Sbjct: 211 EIVTHGRIPYPGMTN--------PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPED 262
Query: 536 RPT 538
RPT
Sbjct: 263 RPT 265
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 46/243 (18%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN--LNKMTTL 360
D++L E L+ +LQ +++++ V + +Y++ E YM N L
Sbjct: 53 DAFLAEANLMKQLQH-QRLVRLYAVV---TQEPIYIITE--------YMENGSLVDFLKT 100
Query: 361 PNTMIIIIMHWYEMLLAVKE----IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
P+ + + I +M + E I IH DL+ AN L V + C KI
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL----VSDTLSC-----KIA 151
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG+A ++D++ + ++ A + + +PEA N T KSDVWS G +L
Sbjct: 152 DFGLARLIEDNEXTA-REGAKFPIKWTAPEAI---------NYGTFTIKSDVWSFGILLT 201
Query: 477 NMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKA 535
++ +GR PY + N +E ++ P L Q M+LC ++ P+
Sbjct: 202 EIVTHGRIPYPGMTN--------PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPED 253
Query: 536 RPT 538
RPT
Sbjct: 254 RPT 256
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 37/256 (14%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME---KG 343
A KV+D +++ + D Y+ E+++LA P ++K+ D Y +L++L+E G
Sbjct: 39 AAKVIDTK--SEEELED-YMVEIDILASCDH-PNIVKLLDAFY--YENNLWILIEFCAGG 92
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
D M L + T ++ + L A+ +H IIH DLK N LF +
Sbjct: 93 AVD--AVMLELERPLTESQIQVVC----KQTLDALNYLHDNKIIHRDLKAGNILFTLD-- 144
Query: 404 KIIDCIGNVLKIIDFGIACSLQDDKTSVHK-DTASGTLNYMSPEAAGQTSSSGGGNTYRI 462
G++ K+ DFG+ S ++ +T + + D+ GT +M+PE +S
Sbjct: 145 ------GDI-KLADFGV--SAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRP----Y 191
Query: 463 TYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLL 522
YK+DVWSLG L M P+ H N +L IA+ + P LA
Sbjct: 192 DYKADVWSLGITLIEMAEIEPPH-HELNPMRVLLKIAKSE-----PPTLAQPSRWSSNFK 245
Query: 523 QSMKLCLQKDPKARPT 538
+K CL+K+ AR T
Sbjct: 246 DFLKKCLEKNVDARWT 261
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D +Y+++E
Sbjct: 38 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDATR--VYLILEYAP- 93
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 94 -LGTVYRELQKLSKFDEQRTATYI--TELANALSYCHSKRVIHRDIKPENLL-LGS---- 145
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + GTL+Y+ PE G+
Sbjct: 146 ----AGELKIADFGWSV----HAPSSRRXXLCGTLDYLPPEMIEGRMHDE---------- 187
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPF 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 46/243 (18%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN--LNKMTTL 360
D++L E L+ +LQ +++++ V + +Y++ E YM N L
Sbjct: 55 DAFLAEANLMKQLQH-QRLVRLYAVV---TQEPIYIITE--------YMENGSLVDFLKT 102
Query: 361 PNTMIIIIMHWYEMLLAVKE----IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
P+ + + I +M + E I IH DL+ AN L V + C KI
Sbjct: 103 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL----VSDTLSC-----KIA 153
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG+A ++D++ + ++ A + + +PEA N T KSDVWS G +L
Sbjct: 154 DFGLARLIEDNEXTA-REGAKFPIKWTAPEAI---------NYGTFTIKSDVWSFGILLT 203
Query: 477 NMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKA 535
++ +GR PY + N +E ++ P L Q M+LC ++ P+
Sbjct: 204 EIVTHGRIPYPGMTN--------PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPED 255
Query: 536 RPT 538
RPT
Sbjct: 256 RPT 258
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 46/243 (18%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN--LNKMTTL 360
D++L E L+ +LQ +++++ V + +Y++ E YM N L
Sbjct: 63 DAFLAEANLMKQLQH-QRLVRLYAVV---TQEPIYIITE--------YMENGSLVDFLKT 110
Query: 361 PNTMIIIIMHWYEMLLAVKE----IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
P+ + + I +M + E I IH DL+ AN L V + C KI
Sbjct: 111 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL----VSDTLSC-----KIA 161
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG+A ++D++ + ++ A + + +PEA N T KSDVWS G +L
Sbjct: 162 DFGLARLIEDNEYTA-REGAKFPIKWTAPEAI---------NYGTFTIKSDVWSFGILLT 211
Query: 477 NMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKA 535
++ +GR PY + N +E ++ P L Q M+LC ++ P+
Sbjct: 212 EIVTHGRIPYPGMTN--------PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPED 263
Query: 536 RPT 538
RPT
Sbjct: 264 RPT 266
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D + +Y+++E
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHD--ATRVYLILEYAP- 91
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 92 -LGTVYRELQKLSKFDEQRTATYI--TELANALSYCHSKRVIHRDIKPENLL-LGS---- 143
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + GTL+Y+ PE G+
Sbjct: 144 ----AGELKIADFGWSV----HAPSSRRTELCGTLDYLPPEMIEGRMHDE---------- 185
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF 206
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 27/197 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D D+ I + + E+ LL +L P ++ + D ++ + + L ++ E +
Sbjct: 48 VALKRIRL-DAEDEGIPSTAIREISLLKELHH-PNIVSLIDVIH--SERCLTLVFEFMEK 103
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K + + NK T L ++ I I + Y++L V H I+H DLKP N L +
Sbjct: 104 DLKKVL-DENK-TGLQDSQIKIYL--YQLLRGVAHCHQHRILHRDLKPQNLLINSD---- 155
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
LK+ DFG+A + S + TL Y +P+ G Y +
Sbjct: 156 -----GALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVL------MGSKKYSTSV- 201
Query: 466 SDVWSLGCILYNMIYGR 482
D+WS+GCI MI G+
Sbjct: 202 -DIWSIGCIFAEMITGK 217
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 82/192 (42%), Gaps = 33/192 (17%)
Query: 306 LNEVELLAKLQGCPYVIKMHDYVYD---TASKHLYVLMEKGDTDLSKYMRNLNKMTTLPN 362
L E+ +L +L+ Y+I++HD + LY+++E D+DL K + +T
Sbjct: 75 LREITILNRLKS-DYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHV 133
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
I+ Y +LL K IH +GIIH DLKPAN L DC +KI DFG+A
Sbjct: 134 KTIL-----YNLLLGEKFIHESGIIHRDLKPANCLLNQ------DC---SVKICDFGLAR 179
Query: 423 SLQDDKTSVHKDTASGTLNYMSP-----EAAGQTSSSGGGNTYR----------ITYKSD 467
++ DK + P Q +S YR T D
Sbjct: 180 TINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSID 239
Query: 468 VWSLGCILYNMI 479
+WS GCI ++
Sbjct: 240 IWSTGCIFAELL 251
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 46/243 (18%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN--LNKMTTL 360
D++L E L+ +LQ +++++ V + +Y++ E YM N L
Sbjct: 54 DAFLAEANLMKQLQH-QRLVRLYAVV---TQEPIYIITE--------YMENGSLVDFLKT 101
Query: 361 PNTMIIIIMHWYEMLLAVKE----IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
P+ + + I +M + E I IH DL+ AN L V + C KI
Sbjct: 102 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL----VSDTLSC-----KIA 152
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG+A ++D++ + ++ A + + +PEA N T KSDVWS G +L
Sbjct: 153 DFGLARLIEDNEXTA-REGAKFPIKWTAPEAI---------NYGTFTIKSDVWSFGILLT 202
Query: 477 NMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKA 535
++ +GR PY + N +E ++ P L Q M+LC ++ P+
Sbjct: 203 EIVTHGRIPYPGMTN--------PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPED 254
Query: 536 RPT 538
RPT
Sbjct: 255 RPT 257
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D S +Y+++E
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHD--STRVYLILEYAP- 91
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 92 -LGTVYRELQKLSKFDEQRTATYIT--ELANALSYCHSKKVIHRDIKPENLL-LGS---- 143
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + GTL+Y+ PE G+
Sbjct: 144 ----AGELKIADFGWSVH----APSSRRAALCGTLDYLPPEMIEGRMHDE---------- 185
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF 206
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 40/256 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A+K+++ I + E++ L KL P++IK++ V T + V+
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNL-KLFRHPHIIKLYQ-VISTPTDFFMVMEYVSGG 96
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+ ++ + + + ++L AV H ++H DLKP N L
Sbjct: 97 ELFDYICKHGRVEEMEARRL-----FQQILSAVDYCHRHMVVHRDLKPENVL-------- 143
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+D N KI DFG++ + D + T+ G+ NY +PE +G +
Sbjct: 144 LDAHMNA-KIADFGLSNMMSDGEFL---RTSCGSPNYAAPEVISGRLYAGP--------E 191
Query: 466 SDVWSLGCILYNMIYGRTPY--SHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQ 523
D+WS G ILY ++ G P+ H+P + K+ + + + P+ N TLL
Sbjct: 192 VDIWSCGVILYALLCGTLPFDDEHVPTLFKKI------RGGVFYIPEYLNRSV--ATLLM 243
Query: 524 SMKLCLQKDPKARPTV 539
M LQ DP R T+
Sbjct: 244 HM---LQVDPLKRATI 256
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 38/149 (25%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 104 VYIVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS + T Y +PE
Sbjct: 154 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMEPEVVTRYYRAPEVI---- 197
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMI 479
G G YK D+WS+GCI+ M+
Sbjct: 198 -LGMG------YKENVDIWSVGCIMGEMV 219
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 46/243 (18%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN--LNKMTTL 360
D++L E L+ +LQ +++++ V + +Y++ E YM N L
Sbjct: 53 DAFLAEANLMKQLQH-QRLVRLYAVV---TQEPIYIITE--------YMENGSLVDFLKT 100
Query: 361 PNTMIIIIMHWYEMLLAVKE----IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
P+ + + I +M + E I IH DL+ AN L V + C KI
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL----VSDTLSC-----KIA 151
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG+A ++D++ + ++ A + + +PEA N T KSDVWS G +L
Sbjct: 152 DFGLARLIEDNEXTA-REGAKFPIKWTAPEAI---------NYGTFTIKSDVWSFGILLT 201
Query: 477 NMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKA 535
++ +GR PY + N +E ++ P L Q M+LC ++ P+
Sbjct: 202 EIVTHGRIPYPGMTN--------PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPED 253
Query: 536 RPT 538
RPT
Sbjct: 254 RPT 256
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 33/202 (16%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG-D 344
LALKV+ + + + EVE+ + L+ P +++++ Y +D +Y+++E
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDATR--VYLILEYAPR 97
Query: 345 TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLK 404
++ K ++ L+K I E+ A+ H+ +IH D+KP N L +G+
Sbjct: 98 GEVYKELQKLSKFDEQRTATYIT-----ELANALSYCHSKRVIHRDIKPENLL-LGS--- 148
Query: 405 IIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRIT 463
LKI DFG + S + GTL+Y+ PE G+
Sbjct: 149 -----AGELKIADFGWSV----HAPSSRRXXLXGTLDYLPPEMIEGRMHDE--------- 190
Query: 464 YKSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 191 -KVDLWSLGVLCYEFLVGKPPF 211
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 46/243 (18%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN--LNKMTTL 360
D++L E L+ +LQ +++++ V + +Y++ E YM N L
Sbjct: 59 DAFLAEANLMKQLQH-QRLVRLYAVV---TQEPIYIITE--------YMENGSLVDFLKT 106
Query: 361 PNTMIIIIMHWYEMLLAVKE----IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
P+ + + I +M + E I IH DL+ AN L V + C KI
Sbjct: 107 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL----VSDTLSC-----KIA 157
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG+A ++D++ + ++ A + + +PEA N T KSDVWS G +L
Sbjct: 158 DFGLARLIEDNEYTA-REGAKFPIKWTAPEAI---------NYGTFTIKSDVWSFGILLT 207
Query: 477 NMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKA 535
++ +GR PY + N +E ++ P L Q M+LC ++ P+
Sbjct: 208 EIVTHGRIPYPGMTN--------PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPED 259
Query: 536 RPT 538
RPT
Sbjct: 260 RPT 262
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 46/243 (18%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN--LNKMTTL 360
D++L E L+ +LQ +++++ V + +Y++ E YM N L
Sbjct: 58 DAFLAEANLMKQLQH-QRLVRLYAVV---TQEPIYIITE--------YMENGSLVDFLKT 105
Query: 361 PNTMIIIIMHWYEMLLAVKE----IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
P+ + + I +M + E I IH DL+ AN L V + C KI
Sbjct: 106 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL----VSDTLSC-----KIA 156
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG+A ++D++ + ++ A + + +PEA N T KSDVWS G +L
Sbjct: 157 DFGLARLIEDNEYTA-REGAKFPIKWTAPEAI---------NYGTFTIKSDVWSFGILLT 206
Query: 477 NMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKA 535
++ +GR PY + N +E ++ P L Q M+LC ++ P+
Sbjct: 207 EIVTHGRIPYPGMTN--------PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPED 258
Query: 536 RPT 538
RPT
Sbjct: 259 RPT 261
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+HA IIH DLK N + N +KI DFG+A S + SG++
Sbjct: 136 LHAKSIIHRDLKSNNIFLHED---------NTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIAR 500
+M+PE S N Y +++SDV++ G +LY ++ G+ PYS+I N + + R
Sbjct: 187 LWMAPEVIRMQDS----NPY--SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
Query: 501 HKDQIEFKPQLAN-NVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
P L+ P + + M CL+K RP+ + +I
Sbjct: 241 G----SLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEI 283
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D + +Y+++E
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHD--ATRVYLILEYAP- 94
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 95 -LGTVYRELQKLSKFDEQRTATYI--TELANALSYCHSKRVIHRDIKPENLL-LGS---- 146
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + GTL+Y+ PE G+
Sbjct: 147 ----AGELKIADFGWSV----HAPSSRRAALCGTLDYLPPEMIEGRMHDE---------- 188
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPF 209
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 113/255 (44%), Gaps = 36/255 (14%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME---KG 343
A KV+D +++ + D Y+ E+++LA P ++K+ D Y +L++L+E G
Sbjct: 66 AAKVIDTK--SEEELED-YMVEIDILASCDH-PNIVKLLDAFY--YENNLWILIEFCAGG 119
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
D M L + T ++ + L A+ +H IIH DLK N LF
Sbjct: 120 AVD--AVMLELERPLTESQIQVVC----KQTLDALNYLHDNKIIHRDLKAGNILFT---- 169
Query: 404 KIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRIT 463
+ +K+ DFG+ S ++ + +D GT +M+PE +S Y
Sbjct: 170 -----LDGDIKLADFGV--SAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKD--RPY--D 218
Query: 464 YKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQ 523
YK+DVWSLG L M P+ H N +L IA+ + P LA
Sbjct: 219 YKADVWSLGITLIEMAEIEPPH-HELNPMRVLLKIAKSE-----PPTLAQPSRWSSNFKD 272
Query: 524 SMKLCLQKDPKARPT 538
+K CL+K+ AR T
Sbjct: 273 FLKKCLEKNVDARWT 287
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D +Y+++E
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDATR--VYLILEYAP- 92
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 93 -LGTVYRELQKLSKFDEQRTATYI--TELANALSYCHSKRVIHRDIKPENLL-LGS---- 144
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + GTL+Y+ PE G+
Sbjct: 145 ----AGELKIADFGWSV----HAPSSRRTDLCGTLDYLPPEMIEGRMHDE---------- 186
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPF 207
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 27/197 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D D+ I + + E+ LL +L P ++ + D ++ + + L ++ E +
Sbjct: 48 VALKRIRL-DAEDEGIPSTAIREISLLKELHH-PNIVSLIDVIH--SERCLTLVFEFMEK 103
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K + NK T L ++ I I + Y++L V H I+H DLKP N L +
Sbjct: 104 DLKKVLDE-NK-TGLQDSQIKIYL--YQLLRGVAHCHQHRILHRDLKPQNLLINSD---- 155
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
LK+ DFG+A + S + TL Y +P+ G Y +
Sbjct: 156 -----GALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVL------MGSKKYSTS-- 200
Query: 466 SDVWSLGCILYNMIYGR 482
D+WS+GCI MI G+
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+HA IIH DLK N + N +KI DFG+A S + SG++
Sbjct: 136 LHAKSIIHRDLKSNNIFLHED---------NTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIAR 500
+M+PE S N Y +++SDV++ G +LY ++ G+ PYS+I N + + R
Sbjct: 187 LWMAPEVIRMQDS----NPY--SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
Query: 501 HKDQIEFKPQLAN-NVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
P L+ P + + M CL+K RP+ + +I
Sbjct: 241 G----SLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEI 283
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D +Y+++E
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDATR--VYLILEYAP- 91
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 92 -LGTVYRELQKLSKFDEQRTATYIT--ELANALSYCHSKRVIHRDIKPENLL-LGS---- 143
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + GTL+Y+ PE G+
Sbjct: 144 ----AGELKIADFGWSVH----APSSRRTDLCGTLDYLPPEMIEGRMHDE---------- 185
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF 206
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 46/260 (17%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A++VV + D D E + + P+++ +H + T S+ +V+ D
Sbjct: 81 AMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGD 139
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L M ++ + LP + E+ LA+ +H GII+ DLK N L +
Sbjct: 140 L---MFHMQRQRKLPEEHARF--YSAEISLALNYLHERGIIYRDLKLDNVL--------L 186
Query: 407 DCIGNVLKIIDFGIAC--SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
D G++ K+ D+G+ C L+ T+ T GT NY++PE G Y +
Sbjct: 187 DSEGHI-KLTDYGM-CKEGLRPGDTT---STFCGTPNYIAPEILR-------GEDY--GF 232
Query: 465 KSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQ----IEFKPQLANNVTIPPT 520
D W+LG +++ M+ GR+P+ ++ + + DQ F+ L + IP +
Sbjct: 233 SVDWWALGVLMFEMMAGRSPFD--------IVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284
Query: 521 L----LQSMKLCLQKDPKAR 536
L +K L KDPK R
Sbjct: 285 LSVKAASVLKSFLNKDPKER 304
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D + +Y+++E
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHD--ATRVYLILEYAP- 94
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 95 -LGTVYRELQKLSKFDEQRTATYIT--ELANALSYCHSKRVIHRDIKPENLL-LGS---- 146
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI +FG + S + T GTL+Y+ PE G+
Sbjct: 147 ----AGELKIANFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDE---------- 188
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPF 209
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALKV+ S I + + E+E+ A L P ++++++Y YD + +Y+++E
Sbjct: 51 VALKVLFKSQIEKEGVEHQLRREIEIQAHLHH-PNILRLYNYFYD--RRRIYLILEYAPR 107
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+ + L K T IM E+ A+ H +IH D+KP N L
Sbjct: 108 --GELYKELQKSCTFDEQRTATIME--ELADALMYCHGKKVIHRDIKPENLLLGLK---- 159
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S+ + T GTL+Y+ PE G+ +
Sbjct: 160 -----GELKIADFGWSVH----APSLRRKTMCGTLDYLPPEMIEGRMHNE---------- 200
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+W +G + Y ++ G P+
Sbjct: 201 KVDLWCIGVLCYELLVGNPPF 221
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 46/243 (18%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN--LNKMTTL 360
D++L E L+ +LQ +++++ V + +Y++ E YM N L
Sbjct: 53 DAFLAEANLMKQLQH-QRLVRLYAVV---TQEPIYIITE--------YMENGSLVDFLKT 100
Query: 361 PNTMIIIIMHWYEMLLAVKE----IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
P+ + + I +M + E I IH DL+ AN L V + C KI
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL----VSDTLSC-----KIA 151
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG+A L +D ++ A + + +PEA N T KSDVWS G +L
Sbjct: 152 DFGLA-RLIEDAEXTAREGAKFPIKWTAPEAI---------NYGTFTIKSDVWSFGILLT 201
Query: 477 NMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKA 535
++ +GR PY + N +E ++ P L Q M+LC ++ P+
Sbjct: 202 EIVTHGRIPYPGMTN--------PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPED 253
Query: 536 RPT 538
RPT
Sbjct: 254 RPT 256
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 46/243 (18%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN--LNKMTTL 360
D++L E L+ +LQ +++++ V + +Y++ E YM N L
Sbjct: 48 DAFLAEANLMKQLQH-QRLVRLYAVV---TQEPIYIITE--------YMENGSLVDFLKT 95
Query: 361 PNTMIIIIMHWYEMLLAVKE----IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
P+ + + I +M + E I IH DL+ AN L V + C KI
Sbjct: 96 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL----VSDTLSC-----KIA 146
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG+A ++D++ + ++ A + + +PEA N T KSDVWS G +L
Sbjct: 147 DFGLARLIEDNEYTA-REGAKFPIKWTAPEAI---------NYGTFTIKSDVWSFGILLT 196
Query: 477 NMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKA 535
++ +GR PY + N +E ++ P L Q M+LC ++ P+
Sbjct: 197 EIVTHGRIPYPGMTN--------PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPED 248
Query: 536 RPT 538
RPT
Sbjct: 249 RPT 251
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D +Y+++E
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDATR--VYLILEYAP- 96
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 97 -LGTVYRELQKLSKFDEQRTATYI--TELANALSYCHSKRVIHRDIKPENLL-LGS---- 148
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + GTL+Y+ PE G+
Sbjct: 149 ----AGELKIADFGWSV----HAPSSRRTDLCGTLDYLPPEMIEGRMHDE---------- 190
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPF 211
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 46/243 (18%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN--LNKMTTL 360
D++L E L+ +LQ +++++ V + +Y++ E YM N L
Sbjct: 53 DAFLAEANLMKQLQH-QRLVRLYAVV---TQEPIYIITE--------YMENGSLVDFLKT 100
Query: 361 PNTMIIIIMHWYEMLLAVKE----IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
P+ + + I +M + E I IH DL+ AN L V + C KI
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL----VSDTLSC-----KIA 151
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG+A ++D++ + ++ A + + +PEA N T KSDVWS G +L
Sbjct: 152 DFGLARLIEDNEYTA-REGAKFPIKWTAPEAI---------NYGTFTIKSDVWSFGILLT 201
Query: 477 NMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKA 535
++ +GR PY + N +E ++ P L Q M+LC ++ P+
Sbjct: 202 EIVTHGRIPYPGMTN--------PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPED 253
Query: 536 RPT 538
RPT
Sbjct: 254 RPT 256
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
+H DL+ AN L N+ V K+ DFG+A ++D++ + + A + + +PE
Sbjct: 136 VHRDLRAANILVGENL---------VCKVADFGLARLIEDNEXTA-RQGAKFPIKWTAPE 185
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQI 505
AA R T KSDVWS G +L + GR PY + N ++L DQ+
Sbjct: 186 AALYG---------RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL------DQV 228
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E ++ P +L M C +KDP+ RPT
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D + +Y+++E
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHD--ATRVYLILEYAP- 91
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 92 -LGTVYRELQKLSKFDEQRTATYIT--ELANALSYCHSKRVIHRDIKPENLL-LGS---- 143
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + GTL+Y+ PE G+
Sbjct: 144 ----AGELKIADFGWSV----HAPSSRRAALCGTLDYLPPEMIEGRMHDE---------- 185
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF 206
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 38/149 (25%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 104 VYIVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS + T Y +PE
Sbjct: 154 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMEPEVVTRYYRAPEVI---- 197
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMI 479
G G YK D+WS+GCI+ M+
Sbjct: 198 -LGMG------YKENVDLWSVGCIMGEMV 219
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+HA IIH DLK N + N +KI DFG+A S + SG++
Sbjct: 124 LHAKSIIHRDLKSNNIFLHED---------NTVKIGDFGLATVKSRWSGSHQFEQLSGSI 174
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIAR 500
+M+PE S N Y +++SDV++ G +LY ++ G+ PYS+I N + + R
Sbjct: 175 LWMAPEVIRMQDS----NPY--SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 228
Query: 501 HKDQIEFKPQLAN-NVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
P L+ P + + M CL+K RP+ + +I
Sbjct: 229 G----SLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEI 271
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D +Y+++E
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDATR--VYLILEYAP- 91
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 92 -LGTVYRELQKLSKFDEQRTATYIT--ELANALSYCHSKRVIHRDIKPENLL-LGS---- 143
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + GTL+Y+ PE G+
Sbjct: 144 ----AGELKIADFGWSVH----APSSRRXXLCGTLDYLPPEMIEGRMHDE---------- 185
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF 206
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
++L AV H G++H DLKP N L C G +K+ DFG+A +Q D+ +
Sbjct: 111 QILEAVLHCHQMGVVHRDLKPENLLLASK------CKGAAVKLADFGLAIEVQGDQQAWF 164
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+GT Y+SPE + + D+W+ G ILY ++ G P+
Sbjct: 165 --GFAGTPGYLSPEVLRKEAYGK---------PVDIWACGVILYILLVGYPPF 206
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 29/189 (15%)
Query: 320 YVIKMHDYVYDTASKHLYVLME---KGD--TDLSKYMRNLNKMTTLPNTMIIIIMHWYEM 374
++ ++H D +LY++ME GD T LSK+ + P M + E+
Sbjct: 122 WITQLHFAFQD--ENYLYLVMEYYVGGDLLTLLSKFGERI------PAEMARFYLA--EI 171
Query: 375 LLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKD 434
++A+ +H G +H D+KP N L +D G++ ++ DFG L+ D T V
Sbjct: 172 VMAIDSVHRLGYVHRDIKPDNIL--------LDRCGHI-RLADFGSCLKLRADGT-VRSL 221
Query: 435 TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY--SHIPNTW 492
A GT +Y+SPE T + D W+LG Y M YG+TP+ T+
Sbjct: 222 VAVGTPDYLSPEILQAVGGGP--GTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETY 279
Query: 493 AKMLAIARH 501
K++ H
Sbjct: 280 GKIVHYKEH 288
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D + +Y+++E
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHD--ATRVYLILEYAP- 91
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 92 -LGTVYRELQKLSKFDEQRTATYIT--ELANALSYCHSKRVIHRDIKPENLL-LGS---- 143
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + GTL+Y+ PE G+
Sbjct: 144 ----AGELKIADFGWSVH----APSSRRTXLCGTLDYLPPEMIEGRMHDE---------- 185
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF 206
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 38 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 93
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 94 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 142
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 143 INTEGAI-KLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL-------LGXKYYST- 190
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 191 AVDIWSLGCIFAEMVTRRALF 211
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D + +Y+++E
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHD--ATRVYLILEYAP- 91
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 92 -LGTVYRELQKLSKFDEQRTATYIT--ELANALSYCHSKRVIHRDIKPENLL-LGS---- 143
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + GTL+Y+ PE G+
Sbjct: 144 ----AGELKIADFGWSVH----APSSRRTDLCGTLDYLPPEMIEGRMHDE---------- 185
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF 206
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 169
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 170 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 220
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 221 ---------IRGQVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 260
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 26/189 (13%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHW 371
L L+G P +I + D V D S+ ++ E + K +R TL + I M
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLRQ-----TLTDYDIRFYM-- 137
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A +
Sbjct: 138 YEILKALDYCHSMGIMHRDVKPHNVM--------IDHEHRKLRLIDWGLAEFYHPGQEY- 188
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ + + PE Y D+WSLGC+L +MI+ + P+ H +
Sbjct: 189 --NVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
Query: 492 WAKMLAIAR 500
+ +++ IA+
Sbjct: 239 YDQLVRIAK 247
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 120 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 168
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 169 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 219
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 220 ---------IRGQVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 259
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 170
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 171 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 221
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 222 ---------IRGQVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 261
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 170
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 171 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 221
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 222 ---------IRGQVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 261
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 169
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 170 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 220
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 221 ---------IRGQVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 260
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 31 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 86
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 87 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 135
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 136 INTEGAI-KLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL-------LGXKYYST- 183
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 184 AVDIWSLGCIFAEMVTRRALF 204
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LALKV+ + + + EVE+ + L+ P +++++ Y +D +Y+++E
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDATR--VYLILEYAP- 94
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L R L K++ + E+ A+ H+ +IH D+KP N L +G+
Sbjct: 95 -LGTVYRELQKLSKFDEQRTATYIT--ELANALSYCHSKRVIHRDIKPENLL-LGS---- 146
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S + GTL+Y+ PE G+
Sbjct: 147 ----AGELKIADFGWSVH----APSSRRXXLCGTLDYLPPEMIEGRMHDE---------- 188
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+WSLG + Y + G+ P+
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPF 209
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
+H DL+ AN L N+ V K+ DFG+A ++D++ + + A + + +PE
Sbjct: 127 VHRDLRAANILVGENL---------VCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPE 176
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQI 505
AA R T KSDVWS G +L + GR PY + N ++L DQ+
Sbjct: 177 AALYG---------RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL------DQV 219
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E ++ P +L M C +KDP+ RPT
Sbjct: 220 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 252
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
+H DL+ AN L N+ V K+ DFG+A ++D++ + + A + + +PE
Sbjct: 136 VHRDLRAANILVGENL---------VCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPE 185
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQI 505
AA R T KSDVWS G +L + GR PY + N ++L DQ+
Sbjct: 186 AALYG---------RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL------DQV 228
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E ++ P +L M C +KDP+ RPT
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 386 IIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSP 445
IIH DLK +N L + V + D +LKI DFG+A +T+ K +A+G +M+P
Sbjct: 129 IIHRDLKSSNILILQKV-ENGDLSNKILKITDFGLAREWH--RTT--KMSAAGAYAWMAP 183
Query: 446 EAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQI 505
E + S G SDVWS G +L+ ++ G P+ I A +A +K +
Sbjct: 184 EVIRASMFSKG---------SDVWSYGVLLWELLTGEVPFRGIDGL-AVAYGVAMNKLAL 233
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
T P + M+ C DP +RP+ N + Q+
Sbjct: 234 PIPS------TCPEPFAKLMEDCWNPDPHSRPSFTNILDQL 268
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDTDLSKYMRNLNKMTTLPNTMIIIIMH 370
L L+G P +I + D V D S+ ++ E +TD + + L I +
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFY 136
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N L ID L++ID+G+A +
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVL--------IDHEHRKLRLIDWGLAEFYHPGQEY 188
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+L +MI+ + P+ H +
Sbjct: 189 ---NVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 491 TWAKMLAIAR 500
+ +++ IA+
Sbjct: 238 NYDQLVRIAK 247
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
+H DL+ AN L N+ V K+ DFG+A ++D++ + + A + + +PE
Sbjct: 136 VHRDLRAANILVGENL---------VCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPE 185
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQI 505
AA R T KSDVWS G +L + GR PY + N ++L DQ+
Sbjct: 186 AALYG---------RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL------DQV 228
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E ++ P +L M C +KDP+ RPT
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 170
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 171 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 221
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 222 ---------IRGQVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 261
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
+H DL+ AN L N+ V K+ DFG+A ++D++ + + A + + +PE
Sbjct: 136 VHRDLRAANILVGENL---------VCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPE 185
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQI 505
AA R T KSDVWS G +L + GR PY + N ++L DQ+
Sbjct: 186 AALYG---------RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL------DQV 228
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E ++ P +L M C +KDP+ RPT
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
+H DL+ AN L N+ V K+ DFG+A ++D++ + + A + + +PE
Sbjct: 136 VHRDLRAANILVGENL---------VCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPE 185
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQI 505
AA R T KSDVWS G +L + GR PY + N ++L DQ+
Sbjct: 186 AALYG---------RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL------DQV 228
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E ++ P +L M C +KDP+ RPT
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 114/246 (46%), Gaps = 52/246 (21%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME---KG------DTDLSKYMRN 353
+++L E +++ KL+ +++++ V + + +Y++ME KG ++ KY+R
Sbjct: 58 EAFLQEAQVMKKLRH-EKLVQLYAVV---SEEPIYIVMEYMSKGCLLDFLKGEMGKYLR- 112
Query: 354 LNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVL 413
LP + + ++ + + +H DL+ AN L N+ V
Sbjct: 113 ------LPQLVDMAA----QIASGMAYVERMNYVHRDLRAANILVGENL---------VC 153
Query: 414 KIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGC 473
K+ DFG+A ++D++ + + A + + +PEAA R T KSDVWS G
Sbjct: 154 KVADFGLARLIEDNEYTA-RQGAKFPIKWTAPEAALYG---------RFTIKSDVWSFGI 203
Query: 474 ILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKD 532
+L + GR PY + N ++L DQ+E ++ P +L M C +KD
Sbjct: 204 LLTELTTKGRVPYPGMVNR--EVL------DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 533 PKARPT 538
P+ RPT
Sbjct: 256 PEERPT 261
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 44/261 (16%)
Query: 281 HEFKPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIK-MHDYVYDTASKHLYVL 339
H + +A+K++DL + D+ E+ +L++ PY+ + Y+ T L+++
Sbjct: 42 HTKEVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCD-SPYITRYFGSYLKSTK---LWII 95
Query: 340 ME--KGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFL 397
ME G + L +L K L T I I+ E+L + +H+ IH D+K AN L
Sbjct: 96 MEYLGGGSAL-----DLLKPGPLEETYIATILR--EILKGLDYLHSERKIHRDIKAANVL 148
Query: 398 FVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGG 457
G+V K+ DFG+A L D T + ++ GT +M+PE Q++
Sbjct: 149 LSEQ--------GDV-KLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSAYD--- 194
Query: 458 NTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTI 517
+K+D+WSLG + G P S + + + I ++ P L +
Sbjct: 195 ------FKADIWSLGITAIELAKGEPPNSDL-HPMRVLFLIPKNS-----PPTLEGQHSK 242
Query: 518 PPTLLQSMKLCLQKDPKARPT 538
P + ++ CL KDP+ RPT
Sbjct: 243 P--FKEFVEACLNKDPRFRPT 261
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
+H DL+ AN L N+ V K+ DFG+A ++D++ + + A + + +PE
Sbjct: 125 VHRDLRAANILVGENL---------VCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPE 174
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQI 505
AA R T KSDVWS G +L + GR PY + N ++L DQ+
Sbjct: 175 AALYG---------RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL------DQV 217
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E ++ P +L M C +KDP+ RPT
Sbjct: 218 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 250
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
+H DL+ AN L N+ V K+ DFG+A ++D++ + + A + + +PE
Sbjct: 136 VHRDLRAANILVGENL---------VCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPE 185
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQI 505
AA R T KSDVWS G +L + GR PY + N ++L DQ+
Sbjct: 186 AALYG---------RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL------DQV 228
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E ++ P +L M C +KDP+ RPT
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 165
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 166 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 216
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 217 ---------IRGQVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 256
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDTDLSKYMRNLNKMTTLPNTMIIIIMH 370
L L+G P +I + D V D S+ ++ E +TD + + L I +
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFY 136
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A +
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM--------IDHEHRKLRLIDWGLAEFYHPGQEY 188
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+L +MI+ + P+ H +
Sbjct: 189 ---NVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 491 TWAKMLAIAR 500
+ +++ IA+
Sbjct: 238 NYDQLVRIAK 247
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 185
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 186 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 236
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 237 ---------IRGQVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 276
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ LY++ E
Sbjct: 34 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH--TENKLYLVFEFLSM 89
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 90 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLL-------- 138
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 139 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 186
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 187 AVDIWSLGCIFAEMVTRRALF 207
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 212
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 213 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 263
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 264 ---------IRGQVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 303
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 284 KPLALKVVDLSDITDQSIADSYLN-EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK 342
K A+KV+ + I ++ + E ++L ++ P+++ +H Y + T +K +L
Sbjct: 83 KLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLH-YAFQTETKLHLILDYI 141
Query: 343 GDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
+L ++ + T + + E++LA++ +H GII+ D+K N L
Sbjct: 142 NGGELFTHLSQRERFTEHEVQIYV-----GEIVLALEHLHKLGIIYRDIKLENIL----- 191
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI 462
+D G+V+ + DFG++ D+T D GT+ YM+P+ GG + +
Sbjct: 192 ---LDSNGHVV-LTDFGLSKEFVADETERAYDFC-GTIEYMAPDIV-----RGGDSGH-- 239
Query: 463 TYKSDVWSLGCILYNMIYGRTPYS 486
D WSLG ++Y ++ G +P++
Sbjct: 240 DKAVDWWSLGVLMYELLTGASPFT 263
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 212
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 213 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 263
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 264 ---------IRGQVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 303
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALKV+ S + + + E+E+ + L+ P +++M++Y +D K +Y+++E
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRH-PNILRMYNYFHD--RKRIYLMLEFAPR 98
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+ + L K M E+ A+ H +IH D+KP N L
Sbjct: 99 --GELYKELQKHGRFDEQRSATFME--ELADALHYCHERKVIHRDIKPENLLM------- 147
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S+ + GTL+Y+ PE G+T
Sbjct: 148 --GYKGELKIADFGWSVH----APSLRRRXMCGTLDYLPPEMIEGKTHDE---------- 191
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+W G + Y + G P+
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPF 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALKV+ S + + + E+E+ + L+ P +++M++Y +D K +Y+++E
Sbjct: 43 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRH-PNILRMYNYFHD--RKRIYLMLEFAPR 99
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+ + L K M E+ A+ H +IH D+KP N L
Sbjct: 100 --GELYKELQKHGRFDEQRSATFME--ELADALHYCHERKVIHRDIKPENLLM------- 148
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S+ + GTL+Y+ PE G+T
Sbjct: 149 --GYKGELKIADFGWSVH----APSLRRRXMCGTLDYLPPEMIEGKTHDE---------- 192
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+W G + Y + G P+
Sbjct: 193 KVDLWCAGVLCYEFLVGMPPF 213
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 32 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLSM 87
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 88 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLL-------- 136
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 137 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 184
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 185 AVDIWSLGCIFAEMVTRRALF 205
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 48/245 (19%)
Query: 303 DSYLNEVELLAKLQGCP----YVIKMHDYVY---DTASKHLYVLMEKGDTDLSKYMRNLN 355
+++L E +++ KL+ Y + + +Y + SK + KG+T KY+R
Sbjct: 307 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGET--GKYLR--- 361
Query: 356 KMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKI 415
LP + + ++ + + +H DL+ AN L N+ V K+
Sbjct: 362 ----LPQLVDMAA----QIASGMAYVERMNYVHRDLRAANILVGENL---------VCKV 404
Query: 416 IDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCIL 475
DFG+A ++D++ + + A + + +PEAA R T KSDVWS G +L
Sbjct: 405 ADFGLARLIEDNEYTA-RQGAKFPIKWTAPEAALYG---------RFTIKSDVWSFGILL 454
Query: 476 YNMIY-GRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPK 534
+ GR PY + N ++L DQ+E ++ P +L M C +K+P+
Sbjct: 455 TELTTKGRVPYPGMVNR--EVL------DQVERGYRMPCPPECPESLHDLMCQCWRKEPE 506
Query: 535 ARPTV 539
RPT
Sbjct: 507 ERPTF 511
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 35 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 90
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 91 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 139
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 140 INTEGAI-KLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL-------LGCKYYST- 187
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 188 AVDIWSLGCIFAEMVTRRALF 208
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 33 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 88
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 89 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLL-------- 137
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 138 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 185
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 186 AVDIWSLGCIFAEMVTRRALF 206
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 38/203 (18%)
Query: 306 LNEVELLAKLQGCPYVIKMHDYVYDTASK---HLYVLMEKGDTDLSKYMRNLNKMTTLPN 362
L E+ +L +L +V+K+ D V + LYV++E D+D K R +T L
Sbjct: 100 LREIAILNRLNH-DHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHI 158
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
++ Y +L+ VK +H+AGI+H DLKPAN L DC +K+ DFG+A
Sbjct: 159 KTLL-----YNLLVGVKYVHSAGILHRDLKPANCLVNQ------DC---SVKVCDFGLAR 204
Query: 423 SL---QDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS------------- 466
++ ++ + + +N ++ G+ Y++
Sbjct: 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEA 264
Query: 467 -DVWSLGCI---LYNMIYGRTPY 485
DVWS+GCI L NMI Y
Sbjct: 265 IDVWSIGCIFAELLNMIKENVAY 287
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 24/180 (13%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
E++LL +L+ VI++ D +Y+ + +Y++ME + + + ++ + +
Sbjct: 56 EIQLLRRLRH-KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPE-----KRFPVC 109
Query: 368 IMHWY--EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQ 425
H Y +++ ++ +H+ GI+H D+KP N L G LKI G+A +L
Sbjct: 110 QAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT---------TGGTLKISALGVAEALH 160
Query: 426 DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T+ G+ + PE A + G +K D+WS G LYN+ G P+
Sbjct: 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSG-------FKVDIWSAGVTLYNITTGLYPF 213
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 110/261 (42%), Gaps = 48/261 (18%)
Query: 286 LALKVVDLSDITDQS-IADSYLN--EVELLAKLQ---GCPYVIKMHDYVYDTASKHLYVL 339
+A+KV+ + + S ++DS EV LL K+ G P VI++ D+ ++T + VL
Sbjct: 59 VAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW-FETQEGFMLVL 117
Query: 340 MEKGDT-DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLF 398
DL Y+ + P+ +++ A++ H+ G++H D+K N L
Sbjct: 118 ERPLPAQDLFDYITEKGPLGEGPSRCFF-----GQVVAAIQHCHSRGVVHRDIKDENIL- 171
Query: 399 VGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGN 458
ID K+IDFG L D+ + GT Y PE + +
Sbjct: 172 -------IDLRRGCAKLIDFGSGALLHDEPYT----DFDGTRVYSPPEWISR-------H 213
Query: 459 TYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIP 518
Y + VWSLG +LY+M+ G P+ +DQ + +L +
Sbjct: 214 QYH-ALPATVWSLGILLYDMVCGDIPFE---------------RDQEILEAELHFPAHVS 257
Query: 519 PTLLQSMKLCLQKDPKARPTV 539
P ++ CL P +RP++
Sbjct: 258 PDCCALIRRCLAPKPSSRPSL 278
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 184
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 185 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 235
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 236 ---------IRGQVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 275
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 38 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 93
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 94 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 142
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 143 INTEGAI-KLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL-------LGCKYYST- 190
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 191 AVDIWSLGCIFAEMVTRRALF 211
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 33 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 88
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 89 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 137
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 138 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 185
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 186 AVDIWSLGCIFAEMVTRRALF 206
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 32 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 87
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 88 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLL-------- 136
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 137 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 184
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 185 AVDIWSLGCIFAEMVTRRALF 205
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 197
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 198 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 248
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 249 ---------IRGQVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 288
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 31/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALKV+ S + + + E+E+ + L+ P +++M++Y +D K +Y+++E
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRH-PNILRMYNYFHD--RKRIYLMLEFAPR 98
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+ + L K M E+ A+ H +IH D+KP N L
Sbjct: 99 --GELYKELQKHGRFDEQRSATFME--ELADALHYCHERKVIHRDIKPENLLM------- 147
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEA-AGQTSSSGGGNTYRITY 464
LKI DFG + S+ + GTL+Y+ PE G+T
Sbjct: 148 --GYKGELKIADFGWSVH----APSLRRRXMCGTLDYLPPEMIEGKTHDE---------- 191
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
K D+W G + Y + G P+
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPF 212
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 30 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 85
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 86 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 134
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 135 INTEGAI-KLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL-------LGCKYYST- 182
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 183 AVDIWSLGCIFAEMVTRRALF 203
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 31 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 86
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 87 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLL-------- 135
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 136 INTEGAI-KLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL-------LGCKYYST- 183
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 184 AVDIWSLGCIFAEMVTRRALF 204
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 32 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 87
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 88 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 136
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 137 INTEGAI-KLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL-------LGCKYYST- 184
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 185 AVDIWSLGCIFAEMVTRRALF 205
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 42/169 (24%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +LS+ ++ + +M+ L Y+ML+ +K +H+AGIIH DLK
Sbjct: 104 VYIVMELMDANLSQVIQMELDHERMSYL----------LYQMLVGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + + LKI+DFG+A + TS T Y +PE
Sbjct: 154 PSNIVVKSDA---------TLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMIYGRTPY---SHIPNTWAKML 496
G G YK D+WS+G I+ MI G + HI + W K++
Sbjct: 198 -LGMG------YKENVDIWSVGVIMGEMIKGGVLFPGTDHI-DQWNKVI 238
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 31 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 86
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 87 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 135
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 136 INTEGAI-KLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL-------LGCKYYST- 183
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 184 AVDIWSLGCIFAEMVTRRALF 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 31 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 86
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 87 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 135
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 136 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 183
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 184 AVDIWSLGCIFAEMVTRRALF 204
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 30 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 85
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 86 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 134
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 135 INTEGAI-KLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL-------LGCKYYST- 182
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 183 AVDIWSLGCIFAEMVTRRALF 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 34 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 89
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 90 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 138
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 139 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 186
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 187 AVDIWSLGCIFAEMVTRRALF 207
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 33 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 88
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 89 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 137
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 138 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 185
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 186 AVDIWSLGCIFAEMVTRRALF 206
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 28/190 (14%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDTDLSKYMRNLNKMTTLPNTMIIIIMH 370
L L+G P +I + D V D S+ ++ E +TD + + L T I +
Sbjct: 84 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL--------TDYDIRFY 135
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A +
Sbjct: 136 MYEILKALDYCHSMGIMHRDVKPHNVM--------IDHEHRKLRLIDWGLAEFYHPGQEY 187
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+L +MI+ + P+ H +
Sbjct: 188 ---NVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRKEPFFHGHD 236
Query: 491 TWAKMLAIAR 500
+ +++ IA+
Sbjct: 237 NYDQLVRIAK 246
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDTDLSKYMRNLNKMTTLPNTMIIIIMH 370
L L+G P +I + D V D S+ ++ E +TD + + L I +
Sbjct: 83 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFY 134
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A +
Sbjct: 135 MYEILKALDYCHSMGIMHRDVKPHNVM--------IDHEHRKLRLIDWGLAEFYHPGQEY 186
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+L +MI+ + P+ H +
Sbjct: 187 ---NVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRKEPFFHGHD 235
Query: 491 TWAKMLAIAR 500
+ +++ IA+
Sbjct: 236 NYDQLVRIAK 245
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDTDLSKYMRNLNKMTTLPNTMIIIIMH 370
L L+G P +I + D V D S+ ++ E +TD + + L I +
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFY 136
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A +
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM--------IDHEHRKLRLIDWGLAEFYHPGQEY 188
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+L +MI+ + P+ H +
Sbjct: 189 ---NVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 491 TWAKMLAIAR 500
+ +++ IA+
Sbjct: 238 NYDQLVRIAK 247
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 31 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 86
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 87 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 135
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 136 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 183
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 184 AVDIWSLGCIFAEMVTRRALF 204
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 31 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 86
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 87 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 135
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 136 INTEGAI-KLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL-------LGCKYYST- 183
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 184 AVDIWSLGCIFAEMVTRRALF 204
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 156 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 204
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 205 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 255
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 256 ---------IRGQVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 295
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 144 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 192
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 193 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 243
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ +++ ++ CL P RPT +I N+P
Sbjct: 244 ---------IRGQVFFRQRVSXECQ------HLIRWCLALRPSDRPT----FEEIQNHP 283
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDTDLSKYMRNLNKMTTLPNTMIIIIMH 370
L L+G P +I + D V D S+ ++ E +TD + + L I +
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFY 136
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A +
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM--------IDHEHRKLRLIDWGLAEFYHPGQEY 188
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+L +MI+ + P+ H +
Sbjct: 189 ---NVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 491 TWAKMLAIAR 500
+ +++ IA+
Sbjct: 238 NYDQLVRIAK 247
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDTDLSKYMRNLNKMTTLPNTMIIIIMH 370
L L+G P +I + D V D S+ ++ E +TD + + L I +
Sbjct: 84 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFY 135
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A +
Sbjct: 136 MYEILKALDYCHSMGIMHRDVKPHNVM--------IDHEHRKLRLIDWGLAEFYHPGQEY 187
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+L +MI+ + P+ H +
Sbjct: 188 ---NVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRKEPFFHGHD 236
Query: 491 TWAKMLAIAR 500
+ +++ IA+
Sbjct: 237 NYDQLVRIAK 246
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 30/183 (16%)
Query: 306 LNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME--KGDTDLSKYMRNLNKMTTLPNT 363
L EV +L KL P ++K++D+ D ++ Y++ME KG + + + K +
Sbjct: 84 LEEVAVL-KLLDHPNIMKLYDFFED--KRNYYLVMECYKGGELFDEIIHRM-KFNEVDAA 139
Query: 364 MIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACS 423
+II ++L V +H I+H DLKP N L K D + +KI+DFG++
Sbjct: 140 VII-----KQVLSGVTYLHKHNIVHRDLKPENLLLES---KEKDAL---IKIVDFGLSAV 188
Query: 424 LQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRT 483
++ K + GT Y++PE + + K DVWS+G IL+ ++ G
Sbjct: 189 FENQKKMKER---LGTAYYIAPEVLRK----------KYDEKCDVWSIGVILFILLAGYP 235
Query: 484 PYS 486
P+
Sbjct: 236 PFG 238
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 42/169 (24%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +LS+ ++ + +M+ L Y+ML+ +K +H+AGIIH DLK
Sbjct: 104 VYIVMELMDANLSQVIQMELDHERMSYL----------LYQMLVGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + + LKI+DFG+A + TS T Y +PE
Sbjct: 154 PSNIVVKSDA---------TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMIYGRTPY---SHIPNTWAKML 496
G G YK D+WS+G I+ MI G + HI + W K++
Sbjct: 198 -LGMG------YKENVDIWSVGVIMGEMIKGGVLFPGTDHI-DQWNKVI 238
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDTDLSKYMRNLNKMTTLPNTMIIIIMH 370
L L+G P +I + D V D S+ ++ E +TD + + L I +
Sbjct: 90 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFY 141
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A +
Sbjct: 142 MYEILKALDYCHSMGIMHRDVKPHNVM--------IDHEHRKLRLIDWGLAEFYHPGQEY 193
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+L +MI+ + P+ H +
Sbjct: 194 ---NVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRKEPFFHGHD 242
Query: 491 TWAKMLAIAR 500
+ +++ IA+
Sbjct: 243 NYDQLVRIAK 252
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 32 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 87
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 88 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 136
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 137 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 184
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 185 AVDIWSLGCIFAEMVTRRALF 205
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 34 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 89
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 90 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 138
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 139 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 186
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 187 AVDIWSLGCIFAEMVTRRALF 207
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
+H DL+ AN L N+ V K+ DFG+ ++D++ + + A + + +PE
Sbjct: 303 VHRDLRAANILVGENL---------VCKVADFGLGRLIEDNEYTA-RQGAKFPIKWTAPE 352
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQI 505
AA R T KSDVWS G +L + GR PY + N ++L DQ+
Sbjct: 353 AALYG---------RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL------DQV 395
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E ++ P +L M C +KDP+ RPT
Sbjct: 396 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 428
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDTDLSKYMRNLNKMTTLPNTMIIIIMH 370
L L+G P +I + D V D S+ ++ E +TD + + L I +
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFY 136
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A +
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM--------IDHEHRKLRLIDWGLAEFYHPGQEY 188
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+L +MI+ + P+ H +
Sbjct: 189 ---NVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 491 TWAKMLAIAR 500
+ +++ IA+
Sbjct: 238 NYDQLVRIAK 247
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDTDLSKYMRNLNKMTTLPNTMIIIIMH 370
L L+G P +I + D V D S+ ++ E +TD + + L I +
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFY 136
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A +
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM--------IDHEHRKLRLIDWGLAEFYHPGQEY 188
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+L +MI+ + P+ H +
Sbjct: 189 ---NVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 491 TWAKMLAIAR 500
+ +++ IA+
Sbjct: 238 NYDQLVRIAK 247
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 31 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 86
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 87 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 135
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 136 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 183
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 184 AVDIWSLGCIFAEMVTRRALF 204
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 117 WQVLEAVRHCHNXGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 165
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 166 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 216
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ +++ ++ CL P RPT +I N+P
Sbjct: 217 ---------IRGQVFFRQRVSXECQ------HLIRWCLALRPSDRPT----FEEIQNHP 256
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 30 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 85
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 86 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 134
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 135 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 182
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 183 AVDIWSLGCIFAEMVTRRALF 203
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 29/167 (17%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
++L +K H I+H D+KP N L N LKI DFGIA +L + +
Sbjct: 119 QILDGIKHAHDMRIVHRDIKPQNILIDSN---------KTLKIFDFGIAKALSETSLT-Q 168
Query: 433 KDTASGTLNYMSPE-AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ GT+ Y SPE A G+ + +D++S+G +LY M+ G P++
Sbjct: 169 TNHVLGTVQYFSPEQAKGEATDEC----------TDIYSIGIVLYEMLVGEPPFN---GE 215
Query: 492 WAKMLAIARHKDQIEFKPQLANNVT--IPPTLLQSMKLCLQKDPKAR 536
A +AI +D + P + +V IP +L + +KD R
Sbjct: 216 TAVSIAIKHIQDSV---PNVTTDVRKDIPQSLSNVILRATEKDKANR 259
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDTDLSKYMRNLNKMTTLPNTMIIIIMH 370
L L+G P +I + D V D S+ ++ E +TD + + L I +
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFY 136
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A +
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM--------IDHEHRKLRLIDWGLAEFYHPGQEY 188
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+L +MI+ + P+ H +
Sbjct: 189 ---NVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 491 TWAKMLAIAR 500
+ +++ IA+
Sbjct: 238 NYDQLVRIAK 247
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 34/172 (19%)
Query: 319 PYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII----IMHWYEM 374
P+++ + Y + T K LY+++E Y+ L I + + E+
Sbjct: 81 PFIVDL-IYAFQTGGK-LYLILE--------YLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 375 LLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKD 434
+A+ +H GII+ DLKP N + ++ G+V K+ DFG+ D T H
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIM--------LNHQGHV-KLTDFGLCKESIHDGTVTH-- 179
Query: 435 TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
T GT+ YM+PE ++ + D WSLG ++Y+M+ G P++
Sbjct: 180 TFCGTIEYMAPEILMRSGHN---------RAVDWWSLGALMYDMLTGAPPFT 222
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 40/256 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A+K+++ I + E++ L KL P++IK++ V T + V+
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNL-KLFRHPHIIKLYQ-VISTPTDFFMVMEYVSGG 96
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+ ++ + + + ++L AV H ++H DLKP N L
Sbjct: 97 ELFDYICKHGRVEEMEARRL-----FQQILSAVDYCHRHMVVHRDLKPENVL-------- 143
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+D N KI DFG++ + D + +D+ G+ NY +PE +G +
Sbjct: 144 LDAHMNA-KIADFGLSNMMSDGEFL--RDSC-GSPNYAAPEVISGRLYAGP--------E 191
Query: 466 SDVWSLGCILYNMIYGRTPY--SHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQ 523
D+WS G ILY ++ G P+ H+P + K+ + + + P+ N TLL
Sbjct: 192 VDIWSCGVILYALLCGTLPFDDEHVPTLFKKI------RGGVFYIPEYLNRSV--ATLLM 243
Query: 524 SMKLCLQKDPKARPTV 539
M LQ DP R T+
Sbjct: 244 HM---LQVDPLKRATI 256
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDTDLSKYMRNLNKMTTLPNTMIIIIMH 370
L L+G P +I + D V D S+ ++ E +TD + + L I +
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFY 136
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A +
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM--------IDHEHRKLRLIDWGLAEFYHPGQEY 188
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+L +MI+ + P+ H +
Sbjct: 189 ---NVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 491 TWAKMLAIAR 500
+ +++ IA+
Sbjct: 238 NYDQLVRIAK 247
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 28/190 (14%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDTDLSKYMRNLNKMTTLPNTMIIIIMH 370
L L+G +IK+ D V D SK ++ E +TD + + L T I +
Sbjct: 86 LENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQIL--------TDFDIRFY 137
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A +
Sbjct: 138 MYELLKALDYCHSKGIMHRDVKPHNVM--------IDHQQKKLRLIDWGLAEFYH---PA 186
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+L +MI+ R P+ H +
Sbjct: 187 QEYNVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRREPFFHGQD 238
Query: 491 TWAKMLAIAR 500
+ +++ IA+
Sbjct: 239 NYDQLVRIAK 248
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 34/147 (23%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 142 VYLVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 191
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS T Y +PE
Sbjct: 192 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 235
Query: 453 SSGGGNTYRITYKSDVWSLGCILYNMI 479
G G + D+WS+GCI+ M+
Sbjct: 236 -LGMGYKENV----DIWSVGCIMGEMV 257
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 35 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 90
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 91 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 139
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 140 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 187
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 188 AVDIWSLGCIFAEMVTRRALF 208
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDTDLSKYMRNLNKMTTLPNTMIIIIMH 370
L L+G P +I + D V D S+ ++ E +TD + + L I +
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFY 136
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A +
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVM--------IDHEHRKLRLIDWGLAEFYHPGQEY 188
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+L +MI+ + P+ H +
Sbjct: 189 ---NVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 491 TWAKMLAIAR 500
+ +++ IA+
Sbjct: 238 NYDQLVRIAK 247
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 30 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 85
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 86 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 134
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 135 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 182
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 183 AVDIWSLGCIFAEMVTRRALF 203
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 34/147 (23%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 142 VYLVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 191
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS T Y +PE
Sbjct: 192 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 235
Query: 453 SSGGGNTYRITYKSDVWSLGCILYNMI 479
G G + D+WS+GCI+ M+
Sbjct: 236 -LGMGYKENV----DIWSVGCIMGEMV 257
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 184
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 185 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 235
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ +++ ++ CL P RPT +I N+P
Sbjct: 236 ---------IRGQVFFRQRVSXECQ------HLIRWCLALRPSDRPT----FEEIQNHP 275
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 38/149 (25%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 104 VYLVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS T Y +PE
Sbjct: 154 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMI 479
G G YK D+WS+GCI+ M+
Sbjct: 198 -LGMG------YKENVDIWSVGCIMGEMV 219
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 38/149 (25%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 104 VYLVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS T Y +PE
Sbjct: 154 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMI 479
G G YK D+WS+GCI+ M+
Sbjct: 198 -LGMG------YKENVDIWSVGCIMGEMV 219
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 32 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 87
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 88 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 136
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 137 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 184
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 185 AVDIWSLGCIFAEMVTRRALF 205
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 38/149 (25%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 103 VYLVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 152
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS T Y +PE
Sbjct: 153 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 196
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMI 479
G G YK D+WS+GCI+ M+
Sbjct: 197 -LGMG------YKENVDIWSVGCIMGEMV 218
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 54/264 (20%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+KVV + D D E + + P+++ +H + T S+ +V+ D
Sbjct: 34 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGD 92
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWY--EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLK 404
L M ++ + LP +Y E+ LA+ +H GII+ DLK N L
Sbjct: 93 L---MFHMQRQRKLPEEH----ARFYSAEISLALNYLHERGIIYRDLKLDNVL------- 138
Query: 405 IIDCIGNVLKIIDFGIACSLQDDKTSVH-KDTAS---GTLNYMSPEAAGQTSSSGGGNTY 460
+D G++ K+ D+G+ K + DT S GT NY++PE G Y
Sbjct: 139 -LDSEGHI-KLTDYGMC------KEGLRPGDTTSXFCGTPNYIAPEILR-------GEDY 183
Query: 461 RITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQ----IEFKPQLANNVT 516
+ D W+LG +++ M+ GR+P+ ++ + + DQ F+ L +
Sbjct: 184 --GFSVDWWALGVLMFEMMAGRSPFD--------IVGSSDNPDQNTEDYLFQVILEKQIR 233
Query: 517 IPPTL----LQSMKLCLQKDPKAR 536
IP +L +K L KDPK R
Sbjct: 234 IPRSLSVKAASVLKSFLNKDPKER 257
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 212
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 213 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 263
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ +++ ++ CL P RPT +I N+P
Sbjct: 264 ---------IRGQVFFRQRVSXECQ------HLIRWCLALRPSDRPT----FEEIQNHP 303
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 38/149 (25%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 98 VYLVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 147
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS T Y +PE
Sbjct: 148 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 191
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMI 479
G G YK D+WS+GCI+ M+
Sbjct: 192 -LGMG------YKENVDIWSVGCIMGEMV 213
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 31 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 86
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL K+M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 87 DLKKFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 135
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 136 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 183
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 184 AVDIWSLGCIFAEMVTRRALF 204
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 38/149 (25%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 97 VYLVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 146
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS T Y +PE
Sbjct: 147 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 190
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMI 479
G G YK D+WS+GCI+ M+
Sbjct: 191 -LGMG------YKENVDIWSVGCIMGEMV 212
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 96 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 154
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 155 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 204
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 205 KQLVRGEPNV---SXICSRYYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 253
Query: 482 R 482
+
Sbjct: 254 Q 254
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 185
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 186 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 236
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ +++ ++ CL P RPT +I N+P
Sbjct: 237 ---------IRGQVFFRQRVSXECQ------HLIRWCLALRPSDRPT----FEEIQNHP 276
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 112/255 (43%), Gaps = 39/255 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A+ + + T S+ + +L E + + P+++K+ + + ++++ME
Sbjct: 419 MAVAIKTCKNCTSDSVREKFLQEALTMRQFDH-PHIVKLIGVITENP---VWIIMEL--C 472
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L + +R+ ++ + +I++ Y++ A+ + + +H D+ N L N
Sbjct: 473 TLGE-LRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---- 527
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYRIT 463
DC+ K+ DFG++ ++D S + + G L +M+PE+ N R T
Sbjct: 528 -DCV----KLGDFGLSRYMED---STYYKASKGKLPIKWMAPESI---------NFRRFT 570
Query: 464 YKSDVWSLG-CILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLL 522
SDVW G C+ +++G P+ + N I R IE +L PPTL
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR----IENGERLPMPPNCPPTLY 622
Query: 523 QSMKLCLQKDPKARP 537
M C DP RP
Sbjct: 623 SLMTKCWAYDPSRRP 637
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 38/149 (25%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 105 VYLVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 154
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS T Y +PE
Sbjct: 155 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 198
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMI 479
G G YK D+WS+GCI+ M+
Sbjct: 199 -LGMG------YKENVDIWSVGCIMGEMV 220
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
+H DL+ AN L N+ V K+ DFG+A ++D++ + + A + + +PE
Sbjct: 126 VHRDLRAANILVGENL---------VCKVADFGLARLIEDNEXTA-RQGAKFPIKWTAPE 175
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQI 505
AA R T KSDVWS G +L + GR PY + N ++L DQ+
Sbjct: 176 AALYG---------RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL------DQV 218
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E ++ P +L M C +K+P+ RPT
Sbjct: 219 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 251
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 28/190 (14%)
Query: 361 PNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGI 420
P TM +I + +++ ++ + + IH DL N L N NV+KI DFG+
Sbjct: 195 PITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSEN---------NVVKICDFGL 245
Query: 421 ACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI- 479
A + + V K L +M+PE+ S KSDVWS G +L+ +
Sbjct: 246 ARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST---------KSDVWSYGVLLWEIFS 296
Query: 480 YGRTPYSHIPNTWAKMLAIARHKDQIEFK-PQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
G +PY P +R ++ + + P+ + P + Q M C +DPK RP
Sbjct: 297 LGGSPY---PGVQMDEDFCSRLREGMRMRAPEYST-----PEIYQIMLDCWHRDPKERPR 348
Query: 539 VGNSVTQINN 548
V ++ +
Sbjct: 349 FAELVEKLGD 358
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 38/149 (25%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 105 VYLVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 154
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS T Y +PE
Sbjct: 155 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 198
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMI 479
G G YK D+WS+GCI+ M+
Sbjct: 199 -LGMG------YKENVDIWSVGCIMGEMV 220
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 28/190 (14%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDTDLSKYMRNLNKMTTLPNTMIIIIMH 370
L L+G +IK+ D V D SK ++ E +TD + + L T I +
Sbjct: 91 LENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQIL--------TDFDIRFY 142
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A +
Sbjct: 143 MYELLKALDYCHSKGIMHRDVKPHNVM--------IDHQQKKLRLIDWGLAEFYH---PA 191
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+L +MI+ R P+ H +
Sbjct: 192 QEYNVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRREPFFHGQD 243
Query: 491 TWAKMLAIAR 500
+ +++ IA+
Sbjct: 244 NYDQLVRIAK 253
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
+H DL+ AN L N+ V K+ DFG+A ++D++ + + A + + +PE
Sbjct: 302 VHRDLRAANILVGENL---------VCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPE 351
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQI 505
AA R T KSDVWS G +L + GR PY + N ++L DQ+
Sbjct: 352 AALYG---------RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL------DQV 394
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E ++ P +L M C +K+P+ RPT
Sbjct: 395 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
+H DL+ AN L N+ V K+ DFG+A ++D++ + + A + + +PE
Sbjct: 302 VHRDLRAANILVGENL---------VCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPE 351
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQI 505
AA R T KSDVWS G +L + GR PY + N ++L DQ+
Sbjct: 352 AALYG---------RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL------DQV 394
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E ++ P +L M C +K+P+ RPT
Sbjct: 395 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 185
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 186 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 236
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ +++ ++ CL P RPT +I N+P
Sbjct: 237 ---------IRGQVFFRQRVSXECQ------HLIRWCLALRPXDRPT----FEEIQNHP 276
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 38/149 (25%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 98 VYLVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 147
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS T Y +PE
Sbjct: 148 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 191
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMI 479
G G YK D+WS+GCI+ M+
Sbjct: 192 -LGMG------YKENVDIWSVGCIMGEMV 213
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
+H DL+ AN L N+ V K+ DFG+A ++D++ + + A + + +PE
Sbjct: 302 VHRDLRAANILVGENL---------VCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPE 351
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQI 505
AA R T KSDVWS G +L + GR PY + N ++L DQ+
Sbjct: 352 AALYG---------RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL------DQV 394
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E ++ P +L M C +K+P+ RPT
Sbjct: 395 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 54/264 (20%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+KVV + D D E + + P+++ +H + T S+ +V+ D
Sbjct: 38 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGD 96
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWY--EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLK 404
L M ++ + LP +Y E+ LA+ +H GII+ DLK N L
Sbjct: 97 L---MFHMQRQRKLPEEH----ARFYSAEISLALNYLHERGIIYRDLKLDNVL------- 142
Query: 405 IIDCIGNVLKIIDFGIACSLQDDKTSVH-KDTAS---GTLNYMSPEAAGQTSSSGGGNTY 460
+D G++ K+ D+G+ K + DT S GT NY++PE G Y
Sbjct: 143 -LDSEGHI-KLTDYGMC------KEGLRPGDTTSXFCGTPNYIAPEILR-------GEDY 187
Query: 461 RITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQ----IEFKPQLANNVT 516
+ D W+LG +++ M+ GR+P+ ++ + + DQ F+ L +
Sbjct: 188 --GFSVDWWALGVLMFEMMAGRSPFD--------IVGSSDNPDQNTEDYLFQVILEKQIR 237
Query: 517 IPPTL----LQSMKLCLQKDPKAR 536
IP +L +K L KDPK R
Sbjct: 238 IPRSLSVKAASVLKSFLNKDPKER 261
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 169 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 217
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 218 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 268
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q+ F+ +++ ++ CL P RPT +I N+P
Sbjct: 269 ---------IRGQVFFRQRVSXECQ------HLIRWCLALRPSDRPT----FEEIQNHP 308
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 38/149 (25%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 109 VYIVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 158
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS T Y +PE
Sbjct: 159 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 202
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMI 479
G G YK D+WS+GCI+ M+
Sbjct: 203 -LGMG------YKENVDLWSVGCIMGEMV 224
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 107/243 (44%), Gaps = 46/243 (18%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRN--LNKMTTL 360
D++L E L+ +LQ +++++ V + +Y++ E YM N L
Sbjct: 49 DAFLAEANLMKQLQH-QRLVRLYAVV---TQEPIYIITE--------YMENGSLVDFLKT 96
Query: 361 PNTMIIIIMHWYEMLLAVKE----IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
P+ + + I +M + E I IH +L+ AN L V + C KI
Sbjct: 97 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANIL----VSDTLSC-----KIA 147
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG+A ++D++ + ++ A + + +PEA N T KSDVWS G +L
Sbjct: 148 DFGLARLIEDNEYTA-REGAKFPIKWTAPEAI---------NYGTFTIKSDVWSFGILLT 197
Query: 477 NMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKA 535
++ +GR PY + N +E ++ P L Q M+LC ++ P+
Sbjct: 198 EIVTHGRIPYPGMTN--------PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPED 249
Query: 536 RPT 538
RPT
Sbjct: 250 RPT 252
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
+H DL+ AN L N+ V K+ DFG+A ++D++ + + A + + +PE
Sbjct: 133 VHRDLRAANILVGENL---------VCKVADFGLARLIEDNEWTARQG-AKFPIKWTAPE 182
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQI 505
AA R T KSDVWS G +L + GR PY + N ++L DQ+
Sbjct: 183 AALYG---------RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL------DQV 225
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E ++ P +L M C +K+P+ RPT
Sbjct: 226 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 258
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 50/262 (19%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+KVV + D D E + + P+++ +H + T S+ +V+ D
Sbjct: 49 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGD 107
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L M ++ + LP + E+ LA+ +H GII+ DLK N L +
Sbjct: 108 L---MFHMQRQRKLPEEHARF--YSAEISLALNYLHERGIIYRDLKLDNVL--------L 154
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVH-KDTAS---GTLNYMSPEAAGQTSSSGGGNTYRI 462
D G++ K+ D+G+ K + DT S GT NY++PE G Y
Sbjct: 155 DSEGHI-KLTDYGMC------KEGLRPGDTTSXFCGTPNYIAPEILR-------GEDY-- 198
Query: 463 TYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQ----IEFKPQLANNVTIP 518
+ D W+LG +++ M+ GR+P+ ++ + + DQ F+ L + IP
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPFD--------IVGSSDNPDQNTEDYLFQVILEKQIRIP 250
Query: 519 PTL----LQSMKLCLQKDPKAR 536
++ +K L KDPK R
Sbjct: 251 RSMSVKAASVLKSFLNKDPKER 272
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
+H DL AN L N+ V K+ DFG+A ++D++ + + A + + +PE
Sbjct: 136 VHRDLAAANILVGENL---------VCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPE 185
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQI 505
AA R T KSDVWS G +L + GR PY + N ++L DQ+
Sbjct: 186 AALYG---------RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL------DQV 228
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E ++ P +L M C +KDP+ RPT
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 38/149 (25%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 98 VYIVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 147
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + TS T Y +PE
Sbjct: 148 PSNIVVKS------DC---TLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 191
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMI 479
G G YK D+WS+GCI+ M+
Sbjct: 192 -LGMG------YKENVDLWSVGCIMGEMV 213
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 34/266 (12%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME--KG 343
+A+K ++L Q+ D L E++ +++ C + + Y L+++M+ G
Sbjct: 43 VAIKRINLEKC--QTSMDELLKEIQAMSQ---CHHPNIVSYYTSFVVKDELWLVMKLLSG 97
Query: 344 DT--DLSKYM--RNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFV 399
+ D+ K++ + +K L + I I+ E+L ++ +H G IH D+K N L
Sbjct: 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILR--EVLEGLEYLHKNGQIHRDVKAGNILLG 155
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQ---DDKTSVHKDTASGTLNYMSPEAAGQTSSSGG 456
+ G+V +I DFG++ L D + + T GT +M+PE Q
Sbjct: 156 ED--------GSV-QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG--- 203
Query: 457 GNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNV- 515
+K+D+WS G + G PY P ML + +E Q +
Sbjct: 204 -----YDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLK 258
Query: 516 TIPPTLLQSMKLCLQKDPKARPTVGN 541
+ + + LCLQKDP+ RPT
Sbjct: 259 KYGKSFRKMISLCLQKDPEKRPTAAE 284
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 198
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 199 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 249
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 250 IGG---------QVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 289
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
+H DL+ AN L N+ V K+ DFG+A ++D++ + + A + + +PE
Sbjct: 133 VHRDLRAANILVGENL---------VCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPE 182
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQI 505
AA R T KSDVWS G +L + GR PY + N ++L DQ+
Sbjct: 183 AALYG---------RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL------DQV 225
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E ++ P +L M C +K+P+ RPT
Sbjct: 226 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 258
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 165
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 166 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 216
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 217 IGG---------QVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 256
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
IH DL+ AN L ++ V KI DFG+A ++D++ + ++ A + + +PE
Sbjct: 306 IHRDLRAANILVSASL---------VCKIADFGLARVIEDNEYTA-REGAKFPIKWTAPE 355
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQI 505
A N T KSDVWS G +L ++ YGR PY + N + R ++
Sbjct: 356 AI---------NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRALERG 401
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
P+ N P L M C + P+ RPT
Sbjct: 402 YRMPRPEN---CPEELYNIMMRCWKNRPEERPT 431
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 96 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 154
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 155 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 204
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 205 KQLVRGEPNVSYICSR---YYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 253
Query: 482 R 482
+
Sbjct: 254 Q 254
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 197
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 198 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 248
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 249 IGG---------QVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 288
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 69/168 (41%), Gaps = 31/168 (18%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
++L +K +H I+H D+K N L I+ VLKI DFG + L
Sbjct: 130 QILEGLKYLHDNQIVHRDIKGDNVL--------INTYSGVLKISDFGTSKRLAGINPCT- 180
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTW 492
+T +GTL YM+PE + G +D+WSLGC + M G+ P+ +
Sbjct: 181 -ETFTGTLQYMAPEIIDKGPRGYGK-------AADIWSLGCTIIEMATGKPPFYELGEPQ 232
Query: 493 AKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKL----CLQKDPKAR 536
A M + K E IP ++ K C + DP R
Sbjct: 233 AAMFKVGMFKVHPE----------IPESMSAEAKAFILKCFEPDPDKR 270
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 197
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 198 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 248
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 249 IGG---------QVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 288
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 98 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 156
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 157 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 206
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 207 KQLVRGEPNVSYICSR---YYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 255
Query: 482 R 482
+
Sbjct: 256 Q 256
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 100 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 158
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 159 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 208
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 209 KQLVRGEPNVSYICSR---YYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 257
Query: 482 R 482
+
Sbjct: 258 Q 258
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 112/255 (43%), Gaps = 39/255 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LA+ + + T S+ + +L E + + P+++K+ + + ++++ME
Sbjct: 42 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDH-PHIVKLIGVITENP---VWIIMEL--C 95
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L + +R+ ++ + +I++ Y++ A+ + + +H D+ N L N
Sbjct: 96 TLGE-LRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---- 150
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYRIT 463
DC+ K+ DFG++ ++D S + + G L +M+PE+ N R T
Sbjct: 151 -DCV----KLGDFGLSRYMED---STYYKASKGKLPIKWMAPESI---------NFRRFT 193
Query: 464 YKSDVWSLG-CILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLL 522
SDVW G C+ +++G P+ + N I R IE +L PPTL
Sbjct: 194 SASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR----IENGERLPMPPNCPPTLY 245
Query: 523 QSMKLCLQKDPKARP 537
M C DP RP
Sbjct: 246 SLMTKCWAYDPSRRP 260
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 198
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 199 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 249
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
Q+ F+ ++++ ++ CL P RPT +I N+P
Sbjct: 250 IGG---------QVFFRQRVSSECQ------HLIRWCLALRPSDRPT----FEEIQNHP 289
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 38/257 (14%)
Query: 295 DITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMRN 353
+ D ++ D L E ++ +L PY+++M + ++ ++ME + L+KY++
Sbjct: 407 EANDPALKDELLAEANVMQQLDN-PYIVRM---IGICEAESWMLVMEMAELGPLNKYLQQ 462
Query: 354 LNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVL 413
N+ N II ++H ++ + +K + + +H DL N L V +
Sbjct: 463 -NRHVKDKN--IIELVH--QVSMGMKYLEESNFVHRDLAARNVLLVTQ---------HYA 508
Query: 414 KIIDFGIACSLQDDKTSVHKDT-ASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLG 472
KI DFG++ +L+ D+ T + + +PE N Y+ + KSDVWS G
Sbjct: 509 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSFG 559
Query: 473 CILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQK 531
+++ YG+ PY + + + +E ++ P + M LC
Sbjct: 560 VLMWEAFSYGQKPYRGMKGSEVTAM--------LEKGERMGCPAGCPREMYDLMNLCWTY 611
Query: 532 DPKARPTVGNSVTQINN 548
D + RP ++ N
Sbjct: 612 DVENRPGFAAVELRLRN 628
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 90 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 148
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 149 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 198
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 199 KQLVRGEPNVSYICSR---YYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 247
Query: 482 R 482
+
Sbjct: 248 Q 248
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
+H DL+ AN L N+ V K+ DFG+A ++D++ + + A + + +PE
Sbjct: 129 VHRDLRAANILVGENL---------VCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPE 178
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYSHIPNTWAKMLAIARHKDQI 505
AA R T KSDVWS G +L + GR PY + N ++L DQ+
Sbjct: 179 AALYG---------RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVL------DQV 221
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E ++ P +L M C +K+P+ RPT
Sbjct: 222 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 254
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 42/169 (24%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + + + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 102 VYLVMELMDANLCQVIHMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 151
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + T+ T Y +PE
Sbjct: 152 PSNIVVKS------DC---TLKILDFGLA---RTASTNFMMTPYVVTRYYRAPEVI---- 195
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMIYGRTPYS---HIPNTWAKML 496
G G YK D+WS+GCI+ ++ G + HI + W K++
Sbjct: 196 -LGMG------YKENVDIWSVGCIMGELVKGSVIFQGTDHI-DQWNKVI 236
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 141 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 199
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 200 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 249
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 250 KQLVRGEPNVSYICSR---YYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 298
Query: 482 R 482
+
Sbjct: 299 Q 299
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 38/257 (14%)
Query: 295 DITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMRN 353
+ D ++ D L E ++ +L PY+++M + ++ ++ME + L+KY++
Sbjct: 408 EANDPALKDELLAEANVMQQLDN-PYIVRM---IGICEAESWMLVMEMAELGPLNKYLQQ 463
Query: 354 LNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVL 413
N+ N II ++H ++ + +K + + +H DL N L V +
Sbjct: 464 -NRHVKDKN--IIELVH--QVSMGMKYLEESNFVHRDLAARNVLLVTQ---------HYA 509
Query: 414 KIIDFGIACSLQDDKTSVHKDT-ASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLG 472
KI DFG++ +L+ D+ T + + +PE N Y+ + KSDVWS G
Sbjct: 510 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSFG 560
Query: 473 CILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQK 531
+++ YG+ PY + + + +E ++ P + M LC
Sbjct: 561 VLMWEAFSYGQKPYRGMKGSEVTAM--------LEKGERMGCPAGCPREMYDLMNLCWTY 612
Query: 532 DPKARPTVGNSVTQINN 548
D + RP ++ N
Sbjct: 613 DVENRPGFAAVELRLRN 629
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 36/192 (18%)
Query: 306 LNEVELLAKLQGCPYVIKMHDYVY-DTASK--HLYVLMEKGDTDLSKYMRNLNKMTTLPN 362
L E+ +L +L+ Y+I+++D + D K LY+++E D+DL K + +T
Sbjct: 73 LREITILNRLKS-DYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHI 131
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
I+ Y +LL IH +GIIH DLKPAN L DC +K+ DFG+A
Sbjct: 132 KTIL-----YNLLLGENFIHESGIIHRDLKPANCLLNQ------DC---SVKVCDFGLAR 177
Query: 423 SLQDDKTS-----VHKDTASGTLNYMSPEAAGQTSSSGGGNTYR----------ITYKSD 467
++ +K + + ++ G N Q +S YR T D
Sbjct: 178 TINSEKDTNIVNDLEENEEPGPHN---KNLKKQLTSHVVTRWYRAPELILLQENYTKSID 234
Query: 468 VWSLGCILYNMI 479
+WS GCI ++
Sbjct: 235 IWSTGCIFAELL 246
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 74 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 132
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 133 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 182
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 183 KQLVRGEPNV---SXICSRYYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 231
Query: 482 R 482
+
Sbjct: 232 Q 232
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
IH DL+ AN L ++ V KI DFG+A ++D++ + ++ A + + +PE
Sbjct: 133 IHRDLRAANILVSASL---------VCKIADFGLARVIEDNEYTA-REGAKFPIKWTAPE 182
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQI 505
A N T KSDVWS G +L ++ YGR PY + N + R ++
Sbjct: 183 AI---------NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRALERG 228
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
P+ N P L M C + P+ RPT
Sbjct: 229 YRMPRPEN---CPEELYNIMMRCWKNRPEERPT 258
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 112/255 (43%), Gaps = 39/255 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LA+ + + T S+ + +L E + + P+++K+ + + ++++ME
Sbjct: 41 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDH-PHIVKLIGVITENP---VWIIMEL--C 94
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L + +R+ ++ + +I++ Y++ A+ + + +H D+ N L N
Sbjct: 95 TLGE-LRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---- 149
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYRIT 463
DC+ K+ DFG++ ++D S + + G L +M+PE+ N R T
Sbjct: 150 -DCV----KLGDFGLSRYMED---STYYKASKGKLPIKWMAPESI---------NFRRFT 192
Query: 464 YKSDVWSLG-CILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLL 522
SDVW G C+ +++G P+ + N I R IE +L PPTL
Sbjct: 193 SASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR----IENGERLPMPPNCPPTLY 244
Query: 523 QSMKLCLQKDPKARP 537
M C DP RP
Sbjct: 245 SLMTKCWAYDPSRRP 259
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 70 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 128
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 129 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 178
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 179 KQLVRGEPNV---SXICSRYYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 227
Query: 482 R 482
+
Sbjct: 228 Q 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 81 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 139
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 140 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 189
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 190 KQLVRGEPNV---SXICSRYYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 238
Query: 482 R 482
+
Sbjct: 239 Q 239
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 74 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 132
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 133 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 182
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 183 KQLVRGEPNV---SXICSRYYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 231
Query: 482 R 482
+
Sbjct: 232 Q 232
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 30 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEHVHQ 85
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL +M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 86 DLKTFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 134
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 135 INTEGAI-KLADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL-------LGCKYYST- 182
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 183 AVDIWSLGCIFAEMVTRRALF 203
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 112/255 (43%), Gaps = 39/255 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LA+ + + T S+ + +L E + + P+++K+ + + ++++ME
Sbjct: 67 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDH-PHIVKLIGVITENP---VWIIMEL--C 120
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L + +R+ ++ + +I++ Y++ A+ + + +H D+ N L N
Sbjct: 121 TLGE-LRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---- 175
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYRIT 463
DC+ K+ DFG++ ++D S + + G L +M+PE+ N R T
Sbjct: 176 -DCV----KLGDFGLSRYMED---STYYKASKGKLPIKWMAPESI---------NFRRFT 218
Query: 464 YKSDVWSLG-CILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLL 522
SDVW G C+ +++G P+ + N I R IE +L PPTL
Sbjct: 219 SASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR----IENGERLPMPPNCPPTLY 270
Query: 523 QSMKLCLQKDPKARP 537
M C DP RP
Sbjct: 271 SLMTKCWAYDPSRRP 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 75/179 (41%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 197
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 198 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 248
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
Q+ F+ +++ ++ CL P RPT +I N+P
Sbjct: 249 IGG---------QVFFRQRVSXECQ------HLIRWCLALRPSDRPT----FEEIQNHP 288
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 75/179 (41%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 198
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 199 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 249
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
Q+ F+ +++ ++ CL P RPT +I N+P
Sbjct: 250 IGG---------QVFFRQRVSXECQ------HLIRWCLALRPSDRPT----FEEIQNHP 289
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 115/265 (43%), Gaps = 39/265 (14%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LA+ + + T S+ + +L E + + P+++K+ + + ++++ME
Sbjct: 36 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDH-PHIVKLIGVITENP---VWIIMEL--C 89
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L + +R+ ++ + +I++ Y++ A+ + + +H D+ N L N
Sbjct: 90 TLGE-LRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---- 144
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYRIT 463
DC+ K+ DFG++ ++D S + + G L +M+PE+ N R T
Sbjct: 145 -DCV----KLGDFGLSRYMED---STYYKASKGKLPIKWMAPESI---------NFRRFT 187
Query: 464 YKSDVWSLG-CILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLL 522
SDVW G C+ +++G P+ + N I R IE +L PPTL
Sbjct: 188 SASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR----IENGERLPMPPNCPPTLY 239
Query: 523 QSMKLCLQKDPKARPTVGNSVTQIN 547
M C DP RP Q++
Sbjct: 240 SLMTKCWAYDPSRRPRFTELKAQLS 264
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 112/255 (43%), Gaps = 39/255 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LA+ + + T S+ + +L E + + P+++K+ + + ++++ME
Sbjct: 44 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDH-PHIVKLIGVITENP---VWIIMEL--C 97
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L + +R+ ++ + +I++ Y++ A+ + + +H D+ N L N
Sbjct: 98 TLGE-LRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---- 152
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYRIT 463
DC+ K+ DFG++ ++D S + + G L +M+PE+ N R T
Sbjct: 153 -DCV----KLGDFGLSRYMED---STYYKASKGKLPIKWMAPESI---------NFRRFT 195
Query: 464 YKSDVWSLG-CILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLL 522
SDVW G C+ +++G P+ + N I R IE +L PPTL
Sbjct: 196 SASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR----IENGERLPMPPNCPPTLY 247
Query: 523 QSMKLCLQKDPKARP 537
M C DP RP
Sbjct: 248 SLMTKCWAYDPSRRP 262
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 30/182 (16%)
Query: 306 LNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMI 365
L EVELL KL P ++K+ + + D++S ++ + G + ++ + + I
Sbjct: 69 LREVELLKKLDH-PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR-KRFSEHDAARI 126
Query: 366 IIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQ 425
I ++ + +H I+H DLKP N L K DC +KIIDFG++ Q
Sbjct: 127 I-----KQVFSGITYMHKHNIVHRDLKPENILLES---KEKDC---DIKIIDFGLSTCFQ 175
Query: 426 DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY--KSDVWSLGCILYNMIYGRT 483
+ + KD GT Y++PE R TY K DVWS G ILY ++ G
Sbjct: 176 --QNTKMKDRI-GTAYYIAPEVL------------RGTYDEKCDVWSAGVILYILLSGTP 220
Query: 484 PY 485
P+
Sbjct: 221 PF 222
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 35/253 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A+ + + T S+ + +L E + + P+++K+ + + ++++ME
Sbjct: 39 MAVAIKTCKNCTSDSVREKFLQEALTMRQFDH-PHIVKLIGVITENP---VWIIMELCTL 94
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+R+ ++ + +I++ Y++ A+ + + +H D+ N L N
Sbjct: 95 G---ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---- 147
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
DC+ K+ DFG++ +D T + +M+PE+ N R T
Sbjct: 148 -DCV----KLGDFGLS-RYMEDSTXXKASKGKLPIKWMAPESI---------NFRRFTSA 192
Query: 466 SDVWSLG-CILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW G C+ +++G P+ + N I R IE +L PPTL
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR----IENGERLPMPPNCPPTLYSL 244
Query: 525 MKLCLQKDPKARP 537
M C DP RP
Sbjct: 245 MTKCWAYDPSRRP 257
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 75/179 (41%), Gaps = 39/179 (21%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L AV+ H G++H D+K N L ID LK+IDFG L+D +V
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENIL--------IDLNRGELKLIDFGSGALLKD---TV 198
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
+ D GT Y PE G + VWSLG +LY+M+ G P+ H
Sbjct: 199 YTDF-DGTRVYSPPEWIRYHRYHG--------RSAAVWSLGILLYDMVCGDIPFEHDEEI 249
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
Q+ F+ +++ ++ CL P RPT +I N+P
Sbjct: 250 IGG---------QVFFRQRVSXECQ------HLIRWCLALRPSDRPT----FEEIQNHP 289
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 34/266 (12%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME--KG 343
+A+K ++L Q+ D L E++ +++ C + + Y L+++M+ G
Sbjct: 38 VAIKRINLEKC--QTSMDELLKEIQAMSQ---CHHPNIVSYYTSFVVKDELWLVMKLLSG 92
Query: 344 DT--DLSKYM--RNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFV 399
+ D+ K++ + +K L + I I+ E+L ++ +H G IH D+K N L
Sbjct: 93 GSVLDIIKHIVAKGEHKSGVLDESTIATILR--EVLEGLEYLHKNGQIHRDVKAGNILLG 150
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQ---DDKTSVHKDTASGTLNYMSPEAAGQTSSSGG 456
+ G+V +I DFG++ L D + + T GT +M+PE Q
Sbjct: 151 ED--------GSV-QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG--- 198
Query: 457 GNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNV- 515
+K+D+WS G + G PY P ML + +E Q +
Sbjct: 199 -----YDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLK 253
Query: 516 TIPPTLLQSMKLCLQKDPKARPTVGN 541
+ + + LCLQKDP+ RPT
Sbjct: 254 KYGKSFRKMISLCLQKDPEKRPTAAE 279
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 69/168 (41%), Gaps = 31/168 (18%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
++L +K +H I+H D+K N L I+ VLKI DFG + L
Sbjct: 116 QILEGLKYLHDNQIVHRDIKGDNVL--------INTYSGVLKISDFGTSKRLAGINPCT- 166
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTW 492
+T +GTL YM+PE + G +D+WSLGC + M G+ P+ +
Sbjct: 167 -ETFTGTLQYMAPEIIDKGPRGYGK-------AADIWSLGCTIIEMATGKPPFYELGEPQ 218
Query: 493 AKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKL----CLQKDPKAR 536
A M + K E IP ++ K C + DP R
Sbjct: 219 AAMFKVGMFKVHPE----------IPESMSAEAKAFILKCFEPDPDKR 256
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 62 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLP 120
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 121 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 170
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 171 KQLVRGEPNVSXICSR---YYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 219
Query: 482 R 482
+
Sbjct: 220 Q 220
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 27/180 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME-KGDTDLSKYMRNLNKMTTLPNTMI 365
NE+ +L K++ P ++ + D +Y++ HLY++M+ +L + T + +
Sbjct: 65 NEIAVLHKIKH-PNIVALDD-IYESGG-HLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 366 IIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQ 425
I +++L AVK +H GI+H DLKP N L+ +D ++ I DFG+ S
Sbjct: 122 I-----FQVLDAVKYLHDLGIVHRDLKPENLLYYS-----LDEDSKIM-ISDFGL--SKM 168
Query: 426 DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+D SV TA GT Y++PE Q S D WS+G I Y ++ G P+
Sbjct: 169 EDPGSV-LSTACGTPGYVAPEVLAQKPYSKA---------VDCWSIGVIAYILLCGYPPF 218
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 39/212 (18%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHW 371
L L G P ++K+ D V D SK ++ E Y+ N + P I ++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFE--------YVNNTDFKVLYPTLTDYDIRYY 130
Query: 372 -YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A K
Sbjct: 131 IYELLKALDYCHSQGIMHRDVKPHNVM--------IDHELRKLRLIDWGLAEFYHPGKEY 182
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+ MI+ + P+ + +
Sbjct: 183 ---NVRVASRYFKGPELLVDLQD--------YDYSLDMWSLGCMFAGMIFRKEPFFYGHD 231
Query: 491 TWAKMLAIAR-----------HKDQIEFKPQL 511
+++ IA+ +K +IE PQL
Sbjct: 232 NHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 30/195 (15%)
Query: 293 LSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDT---ASKHLYVLMEKGDTDLSK 349
+S Q+ L E+++L + + VI + D + + A + +Y++ + +TDL K
Sbjct: 76 ISPFEHQTYCQRTLREIQILLRFRH-ENVIGIRDILRASTLEAMRDVYIVQDLMETDLYK 134
Query: 350 YMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCI 409
L K L N I + Y++L +K IH+A ++H DLKP+N L I+
Sbjct: 135 ----LLKSQQLSNDHICYFL--YQILRGLKYIHSANVLHRDLKPSNLL--------INTT 180
Query: 410 GNVLKIIDFGIA--CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSD 467
+ LKI DFG+A + D T + + T Y +PE +S G T D
Sbjct: 181 CD-LKICDFGLARIADPEHDHTGFLTEXVA-TRWYRAPEI--MLNSKG------YTKSID 230
Query: 468 VWSLGCILYNMIYGR 482
+WS+GCIL M+ R
Sbjct: 231 IWSVGCILAEMLSNR 245
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 62 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 121 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 170
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 171 KQLVRGEPNV---SXICSRYYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 219
Query: 482 R 482
+
Sbjct: 220 Q 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 62 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 121 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 170
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 171 KQLVRGEPNV---SXICSRYYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 219
Query: 482 R 482
+
Sbjct: 220 Q 220
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 319 PYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLPNTMIIIIMHWYE 373
P V+ + + Y K L +++E + + R+ K+ T+P M++I ++ Y+
Sbjct: 92 PNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMP--MLLIKLYMYQ 149
Query: 374 MLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHK 433
+L ++ IH+ GI H D+KP N L +D VLK+IDFG A L + +V
Sbjct: 150 LLRSLAYIHSIGICHRDIKPQNLL--------LDPPSGVLKLIDFGSAKILIAGEPNV-- 199
Query: 434 DTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
+ + Y +PE G Y T D+WS GC++ ++ G+
Sbjct: 200 -SXICSRYYRAPELI------FGATNY--TTNIDIWSTGCVMAELMQGQ 239
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 27/180 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME-KGDTDLSKYMRNLNKMTTLPNTMI 365
NE+ +L K++ P ++ + D +Y++ HLY++M+ +L + T + +
Sbjct: 65 NEIAVLHKIKH-PNIVALDD-IYESGG-HLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 366 IIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQ 425
I +++L AVK +H GI+H DLKP N L+ +D ++ I DFG+ S
Sbjct: 122 I-----FQVLDAVKYLHDLGIVHRDLKPENLLYYS-----LDEDSKIM-ISDFGL--SKM 168
Query: 426 DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+D SV TA GT Y++PE Q S D WS+G I Y ++ G P+
Sbjct: 169 EDPGSVLS-TACGTPGYVAPEVLAQKPYSKA---------VDCWSIGVIAYILLCGYPPF 218
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 63 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 121
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 122 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 171
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 172 KQLVRGEPNV---SXICSRYYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 220
Query: 482 R 482
+
Sbjct: 221 Q 221
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 27/180 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME-KGDTDLSKYMRNLNKMTTLPNTMI 365
NE+ +L K++ P ++ + D +Y++ HLY++M+ +L + T + +
Sbjct: 65 NEIAVLHKIKH-PNIVALDD-IYESGG-HLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 366 IIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQ 425
I +++L AVK +H GI+H DLKP N L+ +D ++ I DFG+ S
Sbjct: 122 I-----FQVLDAVKYLHDLGIVHRDLKPENLLYYS-----LDEDSKIM-ISDFGL--SKM 168
Query: 426 DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+D SV TA GT Y++PE Q S D WS+G I Y ++ G P+
Sbjct: 169 EDPGSVLS-TACGTPGYVAPEVLAQKPYSKA---------VDCWSIGVIAYILLCGYPPF 218
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNAMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 39/212 (18%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHW 371
L L G P ++K+ D V D SK ++ E Y+ N + P I ++
Sbjct: 100 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFE--------YVNNTDFKVLYPTLTDYDIRYY 151
Query: 372 -YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A K
Sbjct: 152 IYELLKALDYCHSQGIMHRDVKPHNVM--------IDHELRKLRLIDWGLAEFYHPGKEY 203
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+ MI+ + P+ + +
Sbjct: 204 ---NVRVASRYFKGPELLVDLQD--------YDYSLDMWSLGCMFAGMIFRKEPFFYGHD 252
Query: 491 TWAKMLAIAR-----------HKDQIEFKPQL 511
+++ IA+ +K +IE PQL
Sbjct: 253 NHDQLVKIAKVLGTDGLNAYLNKYRIELDPQL 284
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 39/212 (18%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHW 371
L L G P ++K+ D V D SK ++ E Y+ N + P I ++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFE--------YVNNTDFKVLYPTLTDYDIRYY 130
Query: 372 -YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A K
Sbjct: 131 IYELLKALDYCHSQGIMHRDVKPHNVM--------IDHELRKLRLIDWGLAEFYHPGKEY 182
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+ MI+ + P+ + +
Sbjct: 183 ---NVRVASRYFKGPELLVDLQD--------YDYSLDMWSLGCMFAGMIFRKEPFFYGHD 231
Query: 491 TWAKMLAIAR-----------HKDQIEFKPQL 511
+++ IA+ +K +IE PQL
Sbjct: 232 NHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 27/192 (14%)
Query: 295 DITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNL 354
D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E DL K+M +
Sbjct: 39 DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQDLKKFM-DA 94
Query: 355 NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLK 414
+ +T +P + +I + +++L + H+ ++H DLKP N L I+ G + K
Sbjct: 95 SALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL--------INTEGAI-K 143
Query: 415 IIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGC 473
+ DFG+A + +T H+ TL Y +PE G Y T D+WSLGC
Sbjct: 144 LADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL-------LGCKYYST-AVDIWSLGC 192
Query: 474 ILYNMIYGRTPY 485
I M+ R +
Sbjct: 193 IFAEMVTRRALF 204
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 27/192 (14%)
Query: 295 DITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNL 354
D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E DL K+M +
Sbjct: 38 DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQDLKKFM-DA 93
Query: 355 NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLK 414
+ +T +P + +I + +++L + H+ ++H DLKP N L I+ G + K
Sbjct: 94 SALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL--------INTEGAI-K 142
Query: 415 IIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGC 473
+ DFG+A + +T H+ TL Y +PE G Y T D+WSLGC
Sbjct: 143 LADFGLARAFGVPVRTYTHEVV---TLWYRAPEIL-------LGCKYYST-AVDIWSLGC 191
Query: 474 ILYNMIYGRTPY 485
I M+ R +
Sbjct: 192 IFAEMVTRRALF 203
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 62 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 121 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 170
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 171 KQLVRGEPNV---SXICSRYYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 219
Query: 482 R 482
+
Sbjct: 220 Q 220
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 161 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 211
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 212 -----VATRWYRAPEIM--------LNWMHYNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 67 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 125
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 126 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 175
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 176 KQLVRGEPNVSYICSR---YYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 224
Query: 482 R 482
+
Sbjct: 225 Q 225
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 39/212 (18%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHW 371
L L G P ++K+ D V D SK ++ E Y+ N + P I ++
Sbjct: 80 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFE--------YVNNTDFKVLYPTLTDYDIRYY 131
Query: 372 -YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A K
Sbjct: 132 IYELLKALDYCHSQGIMHRDVKPHNVM--------IDHELRKLRLIDWGLAEFYHPGKEY 183
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+ MI+ + P+ + +
Sbjct: 184 ---NVRVASRYFKGPELLVDLQD--------YDYSLDMWSLGCMFAGMIFRKEPFFYGHD 232
Query: 491 TWAKMLAIAR-----------HKDQIEFKPQL 511
+++ IA+ +K +IE PQL
Sbjct: 233 NHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 264
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 75 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 133
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 134 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 183
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 184 KQLVRGEPNV---SYICSRYYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 232
Query: 482 R 482
+
Sbjct: 233 Q 233
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 39/255 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
LA+ + + T S+ + +L E + + P+++K+ + + + L G+
Sbjct: 39 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDH-PHIVKLIGVITENPVWIIMELCTLGE- 96
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+R+ ++ + +I++ Y++ A+ + + +H D+ N L N
Sbjct: 97 -----LRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---- 147
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYRIT 463
DC+ K+ DFG++ ++D S + + G L +M+PE+ N R T
Sbjct: 148 -DCV----KLGDFGLSRYMED---STYYKASKGKLPIKWMAPESI---------NFRRFT 190
Query: 464 YKSDVWSLG-CILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLL 522
SDVW G C+ +++G P+ + N I R IE +L PPTL
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR----IENGERLPMPPNCPPTLY 242
Query: 523 QSMKLCLQKDPKARP 537
M C DP RP
Sbjct: 243 SLMTKCWAYDPSRRP 257
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 34/165 (20%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+HA IIH DLK +N +F+ L + KI DFG+A S + SG++
Sbjct: 148 LHAKSIIHRDLK-SNNIFLHEDLTV--------KIGDFGLATEKSRWSGSHQFEQLSGSI 198
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIAR 500
+M+PE N Y +++SDV++ G +LY ++ G+ PYS+I N
Sbjct: 199 LWMAPEVIRMQDK----NPY--SFQSDVYAFGIVLYELMTGQLPYSNINN---------- 242
Query: 501 HKDQIEF-------KPQLAN-NVTIPPTLLQSMKLCLQKDPKARP 537
+DQI F P L+ P + + M CL+K RP
Sbjct: 243 -RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 286
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 39/212 (18%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHW 371
L L G P ++K+ D V D SK ++ E Y+ N + P I ++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFE--------YVNNTDFKVLYPTLTDYDIRYY 130
Query: 372 -YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A K
Sbjct: 131 IYELLKALDYCHSQGIMHRDVKPHNVM--------IDHELRKLRLIDWGLAEFYHPGKEY 182
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+ MI+ + P+ + +
Sbjct: 183 ---NVRVASRYFKGPELLVDLQDY--------DYSLDMWSLGCMFAGMIFRKEPFFYGHD 231
Query: 491 TWAKMLAIAR-----------HKDQIEFKPQL 511
+++ IA+ +K +IE PQL
Sbjct: 232 NHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 39/212 (18%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHW 371
L L G P ++K+ D V D SK ++ E Y+ N + P I ++
Sbjct: 79 LQNLMGGPNIVKLLDIVRDQHSKTPSLIFE--------YVNNTDFKVLYPTLTDYDIRYY 130
Query: 372 -YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A K
Sbjct: 131 IYELLKALDYCHSQGIMHRDVKPHNVM--------IDHELRKLRLIDWGLAEFYHPGKEY 182
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+ MI+ + P+ + +
Sbjct: 183 ---NVRVASRYFKGPELLVDLQDY--------DYSLDMWSLGCMFAGMIFRKEPFFYGHD 231
Query: 491 TWAKMLAIAR-----------HKDQIEFKPQL 511
+++ IA+ +K +IE PQL
Sbjct: 232 NHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 34/165 (20%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+HA IIH DLK +N +F+ L + KI DFG+A S + SG++
Sbjct: 140 LHAKSIIHRDLK-SNNIFLHEDLTV--------KIGDFGLATEKSRWSGSHQFEQLSGSI 190
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIAR 500
+M+PE N Y +++SDV++ G +LY ++ G+ PYS+I N
Sbjct: 191 LWMAPEVIRMQDK----NPY--SFQSDVYAFGIVLYELMTGQLPYSNINN---------- 234
Query: 501 HKDQIEF-------KPQLAN-NVTIPPTLLQSMKLCLQKDPKARP 537
+DQI F P L+ P + + M CL+K RP
Sbjct: 235 -RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 278
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 38/167 (22%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + + + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 104 VYLVMELMDANLCQVIHMELDHERMSYLL----------YQMLCGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + DC LKI+DFG+A + T+ T Y +PE
Sbjct: 154 PSNIVVKS------DC---TLKILDFGLA---RTACTNFMMTPYVVTRYYRAPEVI---- 197
Query: 453 SSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS---HIPNTWAKML 496
G G + D+WS+GCI+ ++ G + HI + W K++
Sbjct: 198 -LGMGYAANV----DIWSVGCIMGELVKGCVIFQGTDHI-DQWNKVI 238
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 42/176 (23%)
Query: 319 PYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII----IMHWYEM 374
P+++ + Y + T K LY+++E Y+ L I + + E+
Sbjct: 81 PFIVDL-IYAFQTGGK-LYLILE--------YLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 375 LLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKD 434
+A+ +H GII+ DLKP N + ++ G+V K+ DFG+ K S+H
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIM--------LNHQGHV-KLTDFGLC------KESIHDG 175
Query: 435 TAS----GTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
T + GT+ YM+PE ++ + D WSLG ++Y+M+ G P++
Sbjct: 176 TVTHXFCGTIEYMAPEILMRSGHN---------RAVDWWSLGALMYDMLTGAPPFT 222
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 28/200 (14%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK+++ + + E+ L L+ P++IK++D + + + +++E
Sbjct: 32 VALKIINKKVLAKSDMQGRIEREISYLRLLRH-PHIIKLYDVI--KSKDEIIMVIEYAGN 88
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+ +KM+ + +++ AV+ H I+H DLKP N L
Sbjct: 89 ELFDYIVQRDKMSEQEARRF-----FQQIISAVEYCHRHKIVHRDLKPENLL-------- 135
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+D NV KI DFG++ + D T+ G+ NY +PE +G +
Sbjct: 136 LDEHLNV-KIADFGLSNIMTDGNFL---KTSCGSPNYAAPEVISGKLYAGP--------E 183
Query: 466 SDVWSLGCILYNMIYGRTPY 485
DVWS G ILY M+ R P+
Sbjct: 184 VDVWSCGVILYVMLCRRLPF 203
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 66 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 124
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 125 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 174
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 175 KQLVRGEPNVSXICSR---YYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 223
Query: 482 R 482
+
Sbjct: 224 Q 224
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
IH DL+ AN L +++ C KI DFG+A ++D++ + ++ A + + +PE
Sbjct: 132 IHRDLRAANVLVSESLM----C-----KIADFGLARVIEDNEYTA-REGAKFPIKWTAPE 181
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQI 505
A N T KSDVWS G +LY ++ YG+ PY N M A+++
Sbjct: 182 AI---------NFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNA-DVMTALSQGYRM- 230
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
P++ N P L MK+C ++ + RPT
Sbjct: 231 ---PRVEN---CPDELYDIMKMCWKEKAEERPT 257
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 28/200 (14%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK+++ + + E+ L L+ P++IK++D + + + +++E
Sbjct: 41 VALKIINKKVLAKSDMQGRIEREISYLRLLRH-PHIIKLYDVI--KSKDEIIMVIEYAGN 97
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+ +KM+ + +++ AV+ H I+H DLKP N L
Sbjct: 98 ELFDYIVQRDKMSEQEARRF-----FQQIISAVEYCHRHKIVHRDLKPENLL-------- 144
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+D NV KI DFG++ + D T+ G+ NY +PE +G +
Sbjct: 145 LDEHLNV-KIADFGLSNIMTDGNFL---KTSCGSPNYAAPEVISGKLYAGP--------E 192
Query: 466 SDVWSLGCILYNMIYGRTPY 485
DVWS G ILY M+ R P+
Sbjct: 193 VDVWSCGVILYVMLCRRLPF 212
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 188
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 189 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 188
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 189 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 189
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 190 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ LY++ E
Sbjct: 34 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH--TENKLYLVFEFLSM 89
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL +M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 90 DLKDFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 138
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 139 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 186
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 187 AVDIWSLGCIFAEMVTRRALF 207
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 62 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 121 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 170
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 171 KQLVRGEPNVSYICSR---YYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 219
Query: 482 R 482
+
Sbjct: 220 Q 220
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 28/200 (14%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK+++ + + E+ L L+ P++IK++D + + + +++E
Sbjct: 42 VALKIINKKVLAKSDMQGRIEREISYLRLLRH-PHIIKLYDVI--KSKDEIIMVIEYAGN 98
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+ +KM+ + +++ AV+ H I+H DLKP N L
Sbjct: 99 ELFDYIVQRDKMSEQEARRF-----FQQIISAVEYCHRHKIVHRDLKPENLL-------- 145
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+D NV KI DFG++ + D T+ G+ NY +PE +G +
Sbjct: 146 LDEHLNV-KIADFGLSNIMTDGNFL---KTSCGSPNYAAPEVISGKLYAGP--------E 193
Query: 466 SDVWSLGCILYNMIYGRTPY 485
DVWS G ILY M+ R P+
Sbjct: 194 VDVWSCGVILYVMLCRRLPF 213
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 115/265 (43%), Gaps = 39/265 (14%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A+ + + T S+ + +L E + + P+++K+ + + ++++ME
Sbjct: 419 MAVAIKTCKNCTSDSVREKFLQEALTMRQFDH-PHIVKLIGVITENP---VWIIMEL--C 472
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L + +R+ ++ + +I++ Y++ A+ + + +H D+ N L +
Sbjct: 473 TLGE-LRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVL-----VSA 526
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYRIT 463
DC+ K+ DFG++ ++D S + + G L +M+PE+ N R T
Sbjct: 527 TDCV----KLGDFGLSRYMED---STYYKASKGKLPIKWMAPESI---------NFRRFT 570
Query: 464 YKSDVWSLG-CILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLL 522
SDVW G C+ +++G P+ + N I R IE +L PPTL
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR----IENGERLPMPPNCPPTLY 622
Query: 523 QSMKLCLQKDPKARPTVGNSVTQIN 547
M C DP RP Q++
Sbjct: 623 SLMTKCWAYDPSRRPRFTELKAQLS 647
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ LY++ E
Sbjct: 33 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH--TENKLYLVFEFLSM 88
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL +M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 89 DLKDFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 137
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 138 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 185
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 186 AVDIWSLGCIFAEMVTRRALF 206
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 184
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 185 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 187
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 188 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 131 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 181
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 182 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 194
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 195 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTG- 181
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 182 ----XVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 26/200 (13%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K++ S +T S + + L+EV +L +L P ++K++++ D + +L + + +G
Sbjct: 50 AIKIIKKSSVTTTSNSGALLDEVAVLKQLDH-PNIMKLYEFFEDKRNYYLVMEVYRGGEL 108
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
+ + K + + +I+ ++L +H I+H DLKP N L K
Sbjct: 109 FDEIILR-QKFSEVDAAVIM-----KQVLSGTTYLHKHNIVHRDLKPENLLLES---KSR 159
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
D + +KI+DFG++ + GT Y++PE + K
Sbjct: 160 DAL---IKIVDFGLSAHFE---VGGKMKERLGTAYYIAPEVLRKKYDE----------KC 203
Query: 467 DVWSLGCILYNMIYGRTPYS 486
DVWS G ILY ++ G P+
Sbjct: 204 DVWSCGVILYILLCGYPPFG 223
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 194
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 195 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTADEMTGY 189
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 190 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 194
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 195 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 27/180 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME-KGDTDLSKYMRNLNKMTTLPNTMI 365
NE+ +L K++ P ++ + D +Y++ HLY++M+ +L + T + +
Sbjct: 65 NEIAVLHKIKH-PNIVALDD-IYESGG-HLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 366 IIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQ 425
I +++L AVK +H GI+H DLKP N L+ +D ++ I DFG+ S
Sbjct: 122 I-----FQVLDAVKYLHDLGIVHRDLKPENLLYYS-----LDEDSKIM-ISDFGL--SKM 168
Query: 426 DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+D SV TA GT Y++PE Q S D WS+G I Y ++ G P+
Sbjct: 169 EDPGSVLS-TACGTPGYVAPEVLAQKPYSKA---------VDCWSIGVIAYILLCGYPPF 218
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 188
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 189 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 184
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 185 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 34 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 89
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL +M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 90 DLKTFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL-------- 138
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 139 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 186
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 187 AVDIWSLGCIFAEMVTRRALF 207
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTADEMTGY 189
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 190 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 28/201 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK + L D + + + + E+ LL +L P ++K+ D ++ T +K LY++ E
Sbjct: 31 VALKKIRL-DTETEGVPSTAIREISLLKELNH-PNIVKLLDVIH-TENK-LYLVFEFLHQ 86
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL +M + + +T +P + +I + +++L + H+ ++H DLKP N L
Sbjct: 87 DLKDFM-DASALTGIP--LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLL-------- 135
Query: 406 IDCIGNVLKIIDFGIACSLQ-DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G + K+ DFG+A + +T H+ TL Y +PE G Y T
Sbjct: 136 INTEGAI-KLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL-------LGCKYYST- 183
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D+WSLGCI M+ R +
Sbjct: 184 AVDIWSLGCIFAEMVTRRALF 204
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 142 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 192
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 193 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 102/240 (42%), Gaps = 44/240 (18%)
Query: 305 YLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---MEKGDTDLSKYMRNLNKMTTLP 361
+L E ++ + P +I++ V T SK + ++ ME G D ++R + T+
Sbjct: 93 FLGEASIMGQFDH-PNIIRLEGVV--TKSKPVMIVTEYMENGSLD--SFLRKHDAQFTV- 146
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I ++ + +K + G +H DL N L N+ V K+ DFG+A
Sbjct: 147 ---IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL---------VCKVSDFGLA 194
Query: 422 CSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN- 477
L+DD + + T G + + SPEA YR T SDVWS G +L+
Sbjct: 195 RVLEDDPEAAYT-TRGGKIPIRWTSPEAIA----------YRKFTSASDVWSYGIVLWEV 243
Query: 478 MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
M YG PY + N + + D+ +L + P L Q M C QKD RP
Sbjct: 244 MSYGERPYWEMSNQ-----DVIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 38/177 (21%)
Query: 377 AVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKT------- 429
AV+ +H+ G++H DLKP+N F + +V+K+ DFG+ ++ D+
Sbjct: 130 AVEFLHSKGLMHRDLKPSNIFFT---------MDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 430 --SVHKDTAS-GTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
+ + T GT YMSPE GN+Y ++K D++SLG IL+ ++Y P+S
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQI-------HGNSY--SHKVDIFSLGLILFELLY---PFS 228
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
T + + ++F P ++Q M L P RP N +
Sbjct: 229 ----TQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDM---LSPSPMERPEAINII 278
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 184
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 185 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTADEMTGY 189
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 190 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 28/200 (14%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK+++ + + E+ L L+ P++IK++D + + + +++E
Sbjct: 36 VALKIINKKVLAKSDMQGRIEREISYLRLLRH-PHIIKLYDVI--KSKDEIIMVIEYAGN 92
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+ +KM+ + +++ AV+ H I+H DLKP N L
Sbjct: 93 ELFDYIVQRDKMSEQEARRF-----FQQIISAVEYCHRHKIVHRDLKPENLL-------- 139
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+D NV KI DFG++ + D T+ G+ NY +PE +G +
Sbjct: 140 LDEHLNV-KIADFGLSNIMTDGNFL---KTSCGSPNYAAPEVISGKLYAGP--------E 187
Query: 466 SDVWSLGCILYNMIYGRTPY 485
DVWS G ILY M+ R P+
Sbjct: 188 VDVWSCGVILYVMLCRRLPF 207
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 187
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 188 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 26/200 (13%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K++ S +T S + + L+EV +L +L P ++K++++ D + +L + + +G
Sbjct: 33 AIKIIKKSSVTTTSNSGALLDEVAVLKQLDH-PNIMKLYEFFEDKRNYYLVMEVYRGGEL 91
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
+ + K + + +I+ ++L +H I+H DLKP N L K
Sbjct: 92 FDEIILR-QKFSEVDAAVIM-----KQVLSGTTYLHKHNIVHRDLKPENLLLES---KSR 142
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
D + +KI+DFG++ + GT Y++PE + K
Sbjct: 143 DAL---IKIVDFGLSAHFE---VGGKMKERLGTAYYIAPEVLRKKYDE----------KC 186
Query: 467 DVWSLGCILYNMIYGRTPYS 486
DVWS G ILY ++ G P+
Sbjct: 187 DVWSCGVILYILLCGYPPFG 206
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 143 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 193
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 194 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 62 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 121 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 170
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 171 KQLVRGEPNVSYICSR---YYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 219
Query: 482 R 482
+
Sbjct: 220 Q 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 202
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 203 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 38/149 (25%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 104 VYLVMELMDANLXQVIQMELDHERMSYL----------LYQMLXGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + + LKI+DFG+A + TS T Y +PE
Sbjct: 154 PSNIVVKSD---------XTLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMI 479
G G YK D+WS+GCI+ M+
Sbjct: 198 -LGMG------YKENVDIWSVGCIMGEMV 219
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 27/181 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASK----HLYVLMEKGDTDLSKYMRNLNKMT-TLP 361
E++++ KL C ++++ + Y + K +L ++++ + + R+ ++ TLP
Sbjct: 62 RELQIMRKLDHC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+I + ++ Y++ ++ IH+ GI H D+KP N L +D VLK+ DFG A
Sbjct: 121 --VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--------LDPDTAVLKLCDFGSA 170
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
L + +V + Y +PE G Y T DVWS GC+L ++ G
Sbjct: 171 KQLVRGEPNVSYICSR---YYRAPELI------FGATDY--TSSIDVWSAGCVLAELLLG 219
Query: 482 R 482
+
Sbjct: 220 Q 220
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 38/149 (25%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 104 VYLVMELMDANLXQVIQMELDHERMSYL----------LYQMLXGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + + LKI+DFG+A + TS T Y +PE
Sbjct: 154 PSNIVVKSD---------XTLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMI 479
G G YK D+WS+GCI+ M+
Sbjct: 198 -LGMG------YKENVDIWSVGCIMGEMV 219
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 202
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 203 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 155 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 205
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 206 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 151 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 201
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 202 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 34/165 (20%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+HA IIH DLK +N +F+ L + KI DFG+A S + SG++
Sbjct: 148 LHAKSIIHRDLK-SNNIFLHEDLTV--------KIGDFGLATVKSRWSGSHQFEQLSGSI 198
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIAR 500
+M+PE N Y +++SDV++ G +LY ++ G+ PYS+I N
Sbjct: 199 LWMAPEVIRMQDK----NPY--SFQSDVYAFGIVLYELMTGQLPYSNINN---------- 242
Query: 501 HKDQIEF-------KPQLAN-NVTIPPTLLQSMKLCLQKDPKARP 537
+DQI F P L+ P + + M CL+K RP
Sbjct: 243 -RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 286
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 38/149 (25%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 97 VYLVMELMDANLXQVIQMELDHERMSYL----------LYQMLXGIKHLHSAGIIHRDLK 146
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + + LKI+DFG+A + TS T Y +PE
Sbjct: 147 PSNIVVKSD---------XTLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 190
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMI 479
G G YK D+WS+GCI+ M+
Sbjct: 191 -LGMG------YKENVDIWSVGCIMGEMV 212
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 151 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 201
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 202 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 43/243 (17%)
Query: 302 ADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLP 361
D + E+E++ L P +I++++ D +Y++ME T + R ++K
Sbjct: 67 VDRFKQEIEIMKSLDH-PNIIRLYETFEDNTD--IYLVMELC-TGGELFERVVHKRVFRE 122
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+ I+ ++L AV H + H DLKP NFLF + D + LK+IDFG+A
Sbjct: 123 SDAARIMK---DVLSAVAYCHKLNVAHRDLKPENFLF------LTDSPDSPLKLIDFGLA 173
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
+ K T GT Y+SP+ + D WS G ++Y ++ G
Sbjct: 174 ARFKPGKMM---RTKVGTPYYVSPQVLEGLYGP----------ECDEWSAGVMMYVLLCG 220
Query: 482 RTPYSHIPNTWAKMLAIAR------HKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKA 535
P+S P ML I KD + PQ + + + L K PK
Sbjct: 221 YPPFS-APTDXEVMLKIREGTFTFPEKDWLNVSPQAESLI----------RRLLTKSPKQ 269
Query: 536 RPT 538
R T
Sbjct: 270 RIT 272
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 39/212 (18%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHW 371
L L G P ++K+ D V D SK ++ E Y+ N + P I ++
Sbjct: 81 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFE--------YVNNTDFKVLYPTLTDYDIRYY 132
Query: 372 -YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A K
Sbjct: 133 IYELLKALDYCHSQGIMHRDVKPHNVM--------IDHELRKLRLIDWGLAEFYHPGKEY 184
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+ MI+ + P+ + +
Sbjct: 185 ---NVRVASRYFKGPELLVDLQD--------YDYSLDMWSLGCMFAGMIFRKEPFFYGHD 233
Query: 491 TWAKMLAIAR-----------HKDQIEFKPQL 511
+++ IA+ +K +IE PQL
Sbjct: 234 NHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 265
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 34/165 (20%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+HA IIH DLK +N +F+ L + KI DFG+A S + SG++
Sbjct: 147 LHAKSIIHRDLK-SNNIFLHEDLTV--------KIGDFGLATVKSRWSGSHQFEQLSGSI 197
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIAR 500
+M+PE N Y +++SDV++ G +LY ++ G+ PYS+I N
Sbjct: 198 LWMAPEVIRMQDK----NPY--SFQSDVYAFGIVLYELMTGQLPYSNINN---------- 241
Query: 501 HKDQIEF-------KPQLAN-NVTIPPTLLQSMKLCLQKDPKARP 537
+DQI F P L+ P + + M CL+K RP
Sbjct: 242 -RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 285
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 38/149 (25%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 104 VYLVMELMDANLCQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + + LKI+DFG+A + TS T Y +PE
Sbjct: 154 PSNIVVKSD---------XTLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMI 479
G G YK D+WS+GCI+ M+
Sbjct: 198 -LGMG------YKENVDIWSVGCIMGEMV 219
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 19/116 (16%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
E+++A+ + IIH D+KP N L +D G+V I DF IA L +
Sbjct: 123 ELVMALDYLQNQRIIHRDMKPDNIL--------LDEHGHV-HITDFNIAAMLPRETQIT- 172
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHI 488
T +GT YM+PE +S G G ++ + D WSLG Y ++ GR PY HI
Sbjct: 173 --TMAGTKPYMAPEMF--SSRKGAGYSFAV----DWWSLGVTAYELLRGRRPY-HI 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 38/149 (25%)
Query: 336 LYVLMEKGDTDLSKYMR---NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLK 392
+Y++ME D +L + ++ + +M+ L Y+ML +K +H+AGIIH DLK
Sbjct: 104 VYLVMELMDANLXQVIQMELDHERMSYL----------LYQMLCGIKHLHSAGIIHRDLK 153
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTS 452
P+N + + LKI+DFG+A + TS T Y +PE
Sbjct: 154 PSNIVVKSD---------XTLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 453 SSGGGNTYRITYKS--DVWSLGCILYNMI 479
G G YK D+WS+GCI+ M+
Sbjct: 198 -LGMG------YKENVDIWSVGCIMGEMV 219
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 22/157 (14%)
Query: 331 TASKHLYVLMEKGDTDLSKYMRN-LNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHS 389
+ +K+L V+ME L K +++ + ++P M +I ++ Y++ AV IH+ GI H
Sbjct: 108 SQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIP--MNLISIYIYQLFRAVGFIHSLGICHR 165
Query: 390 DLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAG 449
D+KP N L ++ N LK+ DFG A L + SV + Y +PE
Sbjct: 166 DIKPQNLL--------VNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRF---YRAPELM- 213
Query: 450 QTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
G Y T D+WS+GC+ +I G+ +S
Sbjct: 214 -----LGATEY--TPSIDLWSIGCVFGELILGKPLFS 243
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 129 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 179
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 180 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 178
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 179 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 129 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 179
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 180 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 43/243 (17%)
Query: 302 ADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLP 361
D + E+E++ L P +I++++ D +Y++ME T + R ++K
Sbjct: 50 VDRFKQEIEIMKSLDH-PNIIRLYETFEDNTD--IYLVMELC-TGGELFERVVHKRVFRE 105
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
+ I+ ++L AV H + H DLKP NFLF + D + LK+IDFG+A
Sbjct: 106 SDAARIMK---DVLSAVAYCHKLNVAHRDLKPENFLF------LTDSPDSPLKLIDFGLA 156
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
+ K T GT Y+SP+ + D WS G ++Y ++ G
Sbjct: 157 ARFKPGKMM---RTKVGTPYYVSPQVLEGLYGP----------ECDEWSAGVMMYVLLCG 203
Query: 482 RTPYSHIPNTWAKMLAIAR------HKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKA 535
P+S P ML I KD + PQ + + + L K PK
Sbjct: 204 YPPFS-APTDXEVMLKIREGTFTFPEKDWLNVSPQAESLI----------RRLLTKSPKQ 252
Query: 536 RPT 538
R T
Sbjct: 253 RIT 255
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 34/165 (20%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+HA IIH DLK +N +F+ L + KI DFG+A S + SG++
Sbjct: 120 LHAKSIIHRDLK-SNNIFLHEDLTV--------KIGDFGLATEKSRWSGSHQFEQLSGSI 170
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIAR 500
+M+PE N Y +++SDV++ G +LY ++ G+ PYS+I N
Sbjct: 171 LWMAPEVIRMQDK----NPY--SFQSDVYAFGIVLYELMTGQLPYSNINN---------- 214
Query: 501 HKDQIEF-------KPQLAN-NVTIPPTLLQSMKLCLQKDPKARP 537
+DQI F P L+ P + + M CL+K RP
Sbjct: 215 -RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 178
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 179 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 39/212 (18%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHW 371
L L G P ++K+ D V D SK ++ E Y+ N + P I ++
Sbjct: 80 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFE--------YVNNTDFKVLYPTLTDYDIRYY 131
Query: 372 -YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A K
Sbjct: 132 IYELLKALDYCHSQGIMHRDVKPHNVM--------IDHELRKLRLIDWGLAEFYHPGKEY 183
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+ MI+ + P+ + +
Sbjct: 184 ---NVRVASRYFKGPELLVDLQD--------YDYSLDMWSLGCMFAGMIFRKEPFFYGHD 232
Query: 491 TWAKMLAIAR-----------HKDQIEFKPQL 511
+++ IA+ +K +IE PQL
Sbjct: 233 NHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 264
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 130 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 180
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 181 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 221
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+++L +V IH I+H DLKP N L C G +K+ DFG+A +Q ++ +
Sbjct: 137 HQILESVNHIHQHDIVHRDLKPENLLLASK------CKGAAVKLADFGLAIEVQGEQQAW 190
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+GT Y+SPE + D+W+ G ILY ++ G P+
Sbjct: 191 F--GFAGTPGYLSPEVLRKDPYGK---------PVDIWACGVILYILLVGYPPF 233
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 112/255 (43%), Gaps = 39/255 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A+ + + T S+ + +L E + + P+++K+ + + ++++ME
Sbjct: 39 MAVAIKTCKNCTSDSVREKFLQEALTMRQFDH-PHIVKLIGVITENP---VWIIMEL--C 92
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L + +R+ ++ + +I++ Y++ A+ + + +H D+ N L N
Sbjct: 93 TLGE-LRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---- 147
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYRIT 463
DC+ K+ DFG++ ++D S + + G L +M+PE+ N R T
Sbjct: 148 -DCV----KLGDFGLSRYMED---STYYKASKGKLPIKWMAPESI---------NFRRFT 190
Query: 464 YKSDVWSLG-CILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLL 522
SDVW G C+ +++G P+ + N I R IE +L PPTL
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR----IENGERLPMPPNCPPTLY 242
Query: 523 QSMKLCLQKDPKARP 537
M C DP RP
Sbjct: 243 SLMTKCWAYDPSRRP 257
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+ T
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMTGY 178
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 179 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 44/240 (18%)
Query: 305 YLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---MEKGDTDLSKYMRNLNKMTTLP 361
+L E ++ + P +I++ V T SK + ++ ME G D ++R + T+
Sbjct: 93 FLGEASIMGQFDH-PNIIRLEGVV--TKSKPVMIVTEYMENGSLD--SFLRKHDAQFTV- 146
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I ++ + +K + G +H DL N L N+ V K+ DFG++
Sbjct: 147 ---IQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNL---------VCKVSDFGLS 194
Query: 422 CSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN- 477
L+DD + + T G + + SPEA YR T SDVWS G +L+
Sbjct: 195 RVLEDDPEAAYT-TRGGKIPIRWTSPEAIA----------YRKFTSASDVWSYGIVLWEV 243
Query: 478 MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
M YG PY + N + + D+ +L + P L Q M C QKD RP
Sbjct: 244 MSYGERPYWEMSNQ-----DVIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 27/199 (13%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+KV++ + ++ + + L EVELL KL P ++K+ + + D++S ++ + G
Sbjct: 51 AVKVINKASAKNKDTS-TILREVELLKKLDH-PNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
+ ++ + + II ++ + +H I+H DLKP N L K
Sbjct: 109 FDEIIKR-KRFSEHDAARII-----KQVFSGITYMHKHNIVHRDLKPENILLES---KEK 159
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
DC +KIIDFG++ Q + + KD GT Y++PE T K
Sbjct: 160 DC---DIKIIDFGLSTCFQ--QNTKMKDRI-GTAYYIAPEVLRGTYDE----------KC 203
Query: 467 DVWSLGCILYNMIYGRTPY 485
DVWS G ILY ++ G P+
Sbjct: 204 DVWSAGVILYILLSGTPPF 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 38/258 (14%)
Query: 294 SDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMR 352
++ D ++ D L E ++ +L PY+++M + ++ ++ME + L+KY++
Sbjct: 62 NEANDPALKDELLAEANVMQQLDN-PYIVRM---IGICEAESWMLVMEMAELGPLNKYLQ 117
Query: 353 NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV 412
N+ N II ++H ++ + +K + + +H DL N L V +
Sbjct: 118 Q-NRHVKDKN--IIELVH--QVSMGMKYLEESNFVHRDLAARNVLLVTQ---------HY 163
Query: 413 LKIIDFGIACSLQDDKTSVHKDT-ASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSL 471
KI DFG++ +L+ D+ T + + +PE N Y+ + KSDVWS
Sbjct: 164 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSF 214
Query: 472 GCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQ 530
G +++ YG+ PY + + ++ A+ +E ++ P + M LC
Sbjct: 215 GVLMWEAFSYGQKPYRGMKGS--EVTAM------LEKGERMGCPAGCPREMYDLMNLCWT 266
Query: 531 KDPKARPTVGNSVTQINN 548
D + RP ++ N
Sbjct: 267 YDVENRPGFAAVELRLRN 284
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 39/212 (18%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHW 371
L L G P ++K+ D V D SK ++ E Y+ N + P I ++
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFE--------YVNNTDFKVLYPTLTDYDIRYY 130
Query: 372 -YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A K
Sbjct: 131 IYELLKALDYCHSQGIMHRDVKPHNVM--------IDHELRKLRLIDWGLAEFYHPGKEY 182
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+ MI+ + P+ + +
Sbjct: 183 ---NVRVASRYFKGPELLVDLQD--------YDYSLDMWSLGCMFAGMIFRKEPFFYGHD 231
Query: 491 TWAKMLAIAR-----------HKDQIEFKPQL 511
+++ IA+ +K +IE PQL
Sbjct: 232 NHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 27/199 (13%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+KV++ + ++ + + L EVELL KL P ++K+ + + D++S ++ + G
Sbjct: 51 AVKVINKASAKNKDTS-TILREVELLKKLDH-PNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
+ ++ + + II ++ + +H I+H DLKP N L K
Sbjct: 109 FDEIIKR-KRFSEHDAARII-----KQVFSGITYMHKHNIVHRDLKPENILLES---KEK 159
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
DC +KIIDFG++ Q + + KD GT Y++PE T K
Sbjct: 160 DC---DIKIIDFGLSTCFQ--QNTKMKDRI-GTAYYIAPEVLRGTYDE----------KC 203
Query: 467 DVWSLGCILYNMIYGRTPY 485
DVWS G ILY ++ G P+
Sbjct: 204 DVWSAGVILYILLSGTPPF 222
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 38/258 (14%)
Query: 294 SDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMR 352
++ D ++ D L E ++ +L PY+++M + ++ ++ME + L+KY++
Sbjct: 48 NEANDPALKDELLAEANVMQQLDN-PYIVRM---IGICEAESWMLVMEMAELGPLNKYLQ 103
Query: 353 NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV 412
N+ N II ++H ++ + +K + + +H DL N L V +
Sbjct: 104 Q-NRHVKDKN--IIELVH--QVSMGMKYLEESNFVHRDLAARNVLLVTQ---------HY 149
Query: 413 LKIIDFGIACSLQDDKTSVHKDT-ASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSL 471
KI DFG++ +L+ D+ T + + +PE N Y+ + KSDVWS
Sbjct: 150 AKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSF 200
Query: 472 GCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQ 530
G +++ YG+ PY + + ++ A+ +E ++ P + M LC
Sbjct: 201 GVLMWEAFSYGQKPYRGMKGS--EVTAM------LEKGERMGCPAGCPREMYDLMNLCWT 252
Query: 531 KDPKARPTVGNSVTQINN 548
D + RP ++ N
Sbjct: 253 YDVENRPGFAAVELRLRN 270
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 34/165 (20%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+HA IIH DLK +N +F+ L + KI DFG+A S + SG++
Sbjct: 125 LHAKSIIHRDLK-SNNIFLHEDLTV--------KIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIAR 500
+M+PE N Y +++SDV++ G +LY ++ G+ PYS+I N
Sbjct: 176 LWMAPEVIRMQDK----NPY--SFQSDVYAFGIVLYELMTGQLPYSNINN---------- 219
Query: 501 HKDQIEF-------KPQLAN-NVTIPPTLLQSMKLCLQKDPKARP 537
+DQI F P L+ P + + M CL+K RP
Sbjct: 220 -RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 263
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 39/212 (18%)
Query: 312 LAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHW 371
L L G P ++K+ D V D SK ++ E Y+ N + P I ++
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFE--------YVNNTDFKVLYPTLTDYDIRYY 130
Query: 372 -YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
YE+L A+ H+ GI+H D+KP N + ID L++ID+G+A K
Sbjct: 131 IYELLKALDYCHSQGIMHRDVKPHNVM--------IDHELRKLRLIDWGLAEFYHPGKEY 182
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPN 490
+ + + PE Y D+WSLGC+ MI+ + P+ + +
Sbjct: 183 ---NVRVASRYFKGPELLVDLQDY--------DYSLDMWSLGCMFAGMIFRKEPFFYGHD 231
Query: 491 TWAKMLAIAR-----------HKDQIEFKPQL 511
+++ IA+ +K +IE PQL
Sbjct: 232 NHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 34/165 (20%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+HA IIH DLK N +F+ L + KI DFG+A S + SG++
Sbjct: 122 LHAKSIIHRDLKSNN-IFLHEDLTV--------KIGDFGLATVKSRWSGSHQFEQLSGSI 172
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIAR 500
+M+PE N Y +++SDV++ G +LY ++ G+ PYS+I N
Sbjct: 173 LWMAPEVIRMQDK----NPY--SFQSDVYAFGIVLYELMTGQLPYSNINN---------- 216
Query: 501 HKDQIEF-------KPQLAN-NVTIPPTLLQSMKLCLQKDPKARP 537
+DQI F P L+ P + + M CL+K RP
Sbjct: 217 -RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 260
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 25/158 (15%)
Query: 398 FVGNVLKIIDCIGN---VLKIIDFGIACSLQD-DKTSVHKDT-ASGTLNYMSPEAAGQTS 452
FV L +C+ + +K+ DFG+A + D + SV + A + + + E+
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL---- 200
Query: 453 SSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHI-PNTWAKMLAIARHKDQIEFKPQ 510
TYR T KSDVWS G +L+ ++ G PY HI P LA R Q E+
Sbjct: 201 -----QTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEY--- 252
Query: 511 LANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINN 548
P +L Q M+ C + DP RPT V ++
Sbjct: 253 ------CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 31/182 (17%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMII- 366
E+ +L KL P V+K+ + + D HLY++ E + N + +P +
Sbjct: 86 EIAILKKLDH-PNVVKLVEVLDDPNEDHLYMVFE---------LVNQGPVMEVPTLKPLS 135
Query: 367 ---IIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACS 423
++ +++ ++ +H IIH D+KP+N L VG +KI DFG++
Sbjct: 136 EDQARFYFQDLIKGIEYLHYQKIIHRDIKPSN-LLVGE--------DGHIKIADFGVSNE 186
Query: 424 LQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRT 483
+ + GT +M+PE+ +T G DVW++G LY ++G+
Sbjct: 187 FKGSDALL--SNTVGTPAFMAPESLSETRKIFSGKAL------DVWAMGVTLYCFVFGQC 238
Query: 484 PY 485
P+
Sbjct: 239 PF 240
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 34/165 (20%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+HA IIH DLK +N +F+ L + KI DFG+A S + SG++
Sbjct: 125 LHAKSIIHRDLK-SNNIFLHEDLTV--------KIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIAR 500
+M+PE N Y +++SDV++ G +LY ++ G+ PYS+I N
Sbjct: 176 LWMAPEVIRMQDK----NPY--SFQSDVYAFGIVLYELMTGQLPYSNINN---------- 219
Query: 501 HKDQIEF-------KPQLAN-NVTIPPTLLQSMKLCLQKDPKARP 537
+DQI F P L+ P + + M CL+K RP
Sbjct: 220 -RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 263
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 26/199 (13%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+KV+ + ++ +S L EV+LL +L P ++K++++ D +L + G +
Sbjct: 78 AVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTG-GE 135
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L + + + + + II ++L + +H I+H DLKP N L L+
Sbjct: 136 LFDEIISRKRFSEVDAARII-----RQVLSGITYMHKNKIVHRDLKPENLL-----LESK 185
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
N+ +IIDFG++ + K K GT Y++PE T K
Sbjct: 186 SKDANI-RIIDFGLSTHFEASKKMKDK---IGTAYYIAPEVLHGTYDE----------KC 231
Query: 467 DVWSLGCILYNMIYGRTPY 485
DVWS G ILY ++ G P+
Sbjct: 232 DVWSTGVILYILLSGCPPF 250
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 26/199 (13%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+KV+ + ++ +S L EV+LL +L P ++K++++ D +L + G +
Sbjct: 79 AVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTG-GE 136
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L + + + + + II ++L + +H I+H DLKP N L L+
Sbjct: 137 LFDEIISRKRFSEVDAARII-----RQVLSGITYMHKNKIVHRDLKPENLL-----LESK 186
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
N+ +IIDFG++ + K K GT Y++PE T K
Sbjct: 187 SKDANI-RIIDFGLSTHFEASKKMKDK---IGTAYYIAPEVLHGTYDE----------KC 232
Query: 467 DVWSLGCILYNMIYGRTPY 485
DVWS G ILY ++ G P+
Sbjct: 233 DVWSTGVILYILLSGCPPF 251
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 44/240 (18%)
Query: 305 YLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---MEKGDTDLSKYMRNLNKMTTLP 361
+L E ++ + P +I++ V T SK + ++ ME G D ++R + T+
Sbjct: 93 FLGEASIMGQFDH-PNIIRLEGVV--TKSKPVMIVTEXMENGSLD--SFLRKHDAQFTV- 146
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I ++ + +K + G +H DL N L N+ V K+ DFG++
Sbjct: 147 ---IQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNL---------VCKVSDFGLS 194
Query: 422 CSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN- 477
L+DD + + T G + + SPEA YR T SDVWS G +L+
Sbjct: 195 RVLEDDPEAAYT-TRGGKIPIRWTSPEAI----------AYRKFTSASDVWSYGIVLWEV 243
Query: 478 MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
M YG PY + N + + D+ +L + P L Q M C QKD RP
Sbjct: 244 MSYGERPYWEMSNQ-----DVIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 26/199 (13%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+KV+ + ++ +S L EV+LL +L P ++K++++ D +L + G +
Sbjct: 61 AVKVISKRQVKQKTDKESLLREVQLLKQLDH-PNIMKLYEFFEDKGYFYLVGEVYTGG-E 118
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L + + + + + II ++L + +H I+H DLKP N L L+
Sbjct: 119 LFDEIISRKRFSEVDAARII-----RQVLSGITYMHKNKIVHRDLKPENLL-----LESK 168
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
N+ +IIDFG++ + K KD GT Y++PE T K
Sbjct: 169 SKDANI-RIIDFGLSTHFEASKKM--KDKI-GTAYYIAPEVLHGTYDE----------KC 214
Query: 467 DVWSLGCILYNMIYGRTPY 485
DVWS G ILY ++ G P+
Sbjct: 215 DVWSTGVILYILLSGCPPF 233
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 34/165 (20%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+HA IIH DLK N +F+ L + KI DFG+A S + SG++
Sbjct: 120 LHAKSIIHRDLKSNN-IFLHEDLTV--------KIGDFGLATVKSRWSGSHQFEQLSGSI 170
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIAR 500
+M+PE N Y +++SDV++ G +LY ++ G+ PYS+I N
Sbjct: 171 LWMAPEVIRMQDK----NPY--SFQSDVYAFGIVLYELMTGQLPYSNINN---------- 214
Query: 501 HKDQIEF-------KPQLAN-NVTIPPTLLQSMKLCLQKDPKARP 537
+DQI F P L+ P + + M CL+K RP
Sbjct: 215 -RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 114/266 (42%), Gaps = 53/266 (19%)
Query: 296 ITDQSIADSYLNEVELLAKLQG-----CPYVIKMHDYVYDTASKHLYVLMEKGDT-DLSK 349
I+ +S D + NE++++ ++ C +I +D VY +Y ME +
Sbjct: 81 ISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVY-----IIYEYMENDSILKFDE 135
Query: 350 YMRNLNKMTT--LPNTMIIIIMHWYEMLLAVKEIH-AAGIIHSDLKPANFLFVGNVLKII 406
Y L+K T +P +I I+ +L + IH I H D+KP+N L N
Sbjct: 136 YFFVLDKNYTCFIPIQVIKCIIK--SVLNSFSYIHNEKNICHRDVKPSNILMDKN----- 188
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
G V K+ DFG + + D K + GT +M PE SS G K
Sbjct: 189 ---GRV-KLSDFGESEYMVDKKIK----GSRGTYEFMPPEFFSNESSYNGA-------KV 233
Query: 467 DVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS-- 524
D+WSLG LY M Y P+S + + ++ R K+ IE+ P N+ P T +S
Sbjct: 234 DIWSLGICLYVMFYNVVPFS-LKISLVELFNNIRTKN-IEY-PLDRNHFLYPLTNKKSTC 290
Query: 525 ------------MKLCLQKDPKARPT 538
+KL L+K+P R T
Sbjct: 291 SNNFLSNEDIDFLKLFLRKNPAERIT 316
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 34/165 (20%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+HA IIH DLK +N +F+ L + KI DFG+A S + SG++
Sbjct: 120 LHAKSIIHRDLK-SNNIFLHEDLTV--------KIGDFGLATVKSRWSGSHQFEQLSGSI 170
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIAR 500
+M+PE N Y +++SDV++ G +LY ++ G+ PYS+I N
Sbjct: 171 LWMAPEVIRMQDK----NPY--SFQSDVYAFGIVLYELMTGQLPYSNINN---------- 214
Query: 501 HKDQIEF-------KPQLAN-NVTIPPTLLQSMKLCLQKDPKARP 537
+DQI F P L+ P + + M CL+K RP
Sbjct: 215 -RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 38/258 (14%)
Query: 294 SDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMR 352
++ D ++ D L E ++ +L PY+++M + ++ ++ME + L+KY++
Sbjct: 64 NEANDPALKDELLAEANVMQQLDN-PYIVRM---IGICEAESWMLVMEMAELGPLNKYLQ 119
Query: 353 NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV 412
N+ N II ++H ++ + +K + + +H DL N L V +
Sbjct: 120 Q-NRHVKDKN--IIELVH--QVSMGMKYLEESNFVHRDLAARNVLLVTQ---------HY 165
Query: 413 LKIIDFGIACSLQDDKTSVHKDT-ASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSL 471
KI DFG++ +L+ D+ T + + +PE N Y+ + KSDVWS
Sbjct: 166 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSF 216
Query: 472 GCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQ 530
G +++ YG+ PY + + ++ A+ +E ++ P + M LC
Sbjct: 217 GVLMWEAFSYGQKPYRGMKGS--EVTAM------LEKGERMGCPAGCPREMYDLMNLCWT 268
Query: 531 KDPKARPTVGNSVTQINN 548
D + RP ++ N
Sbjct: 269 YDVENRPGFAAVELRLRN 286
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 38/258 (14%)
Query: 294 SDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMR 352
++ D ++ D L E ++ +L PY+++M + ++ ++ME + L+KY++
Sbjct: 64 NEANDPALKDELLAEANVMQQLDN-PYIVRM---IGICEAESWMLVMEMAELGPLNKYLQ 119
Query: 353 NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV 412
N+ N II ++H ++ + +K + + +H DL N L V +
Sbjct: 120 Q-NRHVKDKN--IIELVH--QVSMGMKYLEESNFVHRDLAARNVLLVTQ---------HY 165
Query: 413 LKIIDFGIACSLQDDKTSVHKDT-ASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSL 471
KI DFG++ +L+ D+ T + + +PE N Y+ + KSDVWS
Sbjct: 166 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSF 216
Query: 472 GCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQ 530
G +++ YG+ PY + + ++ A+ +E ++ P + M LC
Sbjct: 217 GVLMWEAFSYGQKPYRGMKGS--EVTAM------LEKGERMGCPAGCPREMYDLMNLCWT 268
Query: 531 KDPKARPTVGNSVTQINN 548
D + RP ++ N
Sbjct: 269 YDVENRPGFAAVELRLRN 286
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 38/258 (14%)
Query: 294 SDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMR 352
++ D ++ D L E ++ +L PY+++M + ++ ++ME + L+KY++
Sbjct: 42 NEANDPALKDELLAEANVMQQLDN-PYIVRM---IGICEAESWMLVMEMAELGPLNKYLQ 97
Query: 353 NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV 412
N+ N II ++H ++ + +K + + +H DL N L V +
Sbjct: 98 Q-NRHVKDKN--IIELVH--QVSMGMKYLEESNFVHRDLAARNVLLVTQ---------HY 143
Query: 413 LKIIDFGIACSLQDDKTSVHKDT-ASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSL 471
KI DFG++ +L+ D+ T + + +PE N Y+ + KSDVWS
Sbjct: 144 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSF 194
Query: 472 GCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQ 530
G +++ YG+ PY + + ++ A+ +E ++ P + M LC
Sbjct: 195 GVLMWEAFSYGQKPYRGMKGS--EVTAM------LEKGERMGCPAGCPREMYDLMNLCWT 246
Query: 531 KDPKARPTVGNSVTQINN 548
D + RP ++ N
Sbjct: 247 YDVENRPGFAAVELRLRN 264
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 38/258 (14%)
Query: 294 SDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMR 352
++ D ++ D L E ++ +L PY+++M + ++ ++ME + L+KY++
Sbjct: 48 NEANDPALKDELLAEANVMQQLDN-PYIVRM---IGICEAESWMLVMEMAELGPLNKYLQ 103
Query: 353 NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV 412
N+ N II ++H ++ + +K + + +H DL N L V +
Sbjct: 104 Q-NRHVKDKN--IIELVH--QVSMGMKYLEESNFVHRDLAARNVLLVTQ---------HY 149
Query: 413 LKIIDFGIACSLQDDKTSVHKDT-ASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSL 471
KI DFG++ +L+ D+ T + + +PE N Y+ + KSDVWS
Sbjct: 150 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSF 200
Query: 472 GCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQ 530
G +++ YG+ PY + + ++ A+ +E ++ P + M LC
Sbjct: 201 GVLMWEAFSYGQKPYRGMKGS--EVTAM------LEKGERMGCPAGCPREMYDLMNLCWT 252
Query: 531 KDPKARPTVGNSVTQINN 548
D + RP ++ N
Sbjct: 253 YDVENRPGFAAVELRLRN 270
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 26/199 (13%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+KV+ + ++ +S L EV+LL +L P ++K++++ D +L + G +
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLDH-PNIMKLYEFFEDKGYFYLVGEVYTG-GE 112
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L + + + + + II ++L + +H I+H DLKP N L L+
Sbjct: 113 LFDEIISRKRFSEVDAARII-----RQVLSGITYMHKNKIVHRDLKPENLL-----LESK 162
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
N+ +IIDFG++ + K K GT Y++PE T K
Sbjct: 163 SKDANI-RIIDFGLSTHFEASKKMKDK---IGTAYYIAPEVLHGTYDE----------KC 208
Query: 467 DVWSLGCILYNMIYGRTPY 485
DVWS G ILY ++ G P+
Sbjct: 209 DVWSTGVILYILLSGCPPF 227
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 26/176 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++ + + + IH DL N L G + KI DFG+A +++D V
Sbjct: 170 YQVAKGMAFLASKNCIHRDLAARNILLTH---------GRITKICDFGLARDIKNDSNYV 220
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPN 490
K A + +M+PE+ T++SDVWS G L+ + G +PY +P
Sbjct: 221 VKGNARLPVKWMAPESIFNCV---------YTFESDVWSYGIFLWELFSLGSSPYPGMPV 271
Query: 491 TWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
+K + + ++ P+ A P + MK C DP RPT V I
Sbjct: 272 D-SKFYKMIKEGFRM-LSPEHA-----PAEMYDIMKTCWDADPLKRPTFKQIVQLI 320
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 44/240 (18%)
Query: 305 YLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---MEKGDTDLSKYMRNLNKMTTLP 361
+L E ++ + P +I++ V T SK + ++ ME G D ++R + T+
Sbjct: 64 FLGEASIMGQFDH-PNIIRLEGVV--TKSKPVMIVTEXMENGSLD--SFLRKHDAQFTV- 117
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I ++ + +K + G +H DL N L N+ V K+ DFG++
Sbjct: 118 ---IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL---------VCKVSDFGLS 165
Query: 422 CSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN- 477
L+DD + + T G + + SPEA YR T SDVWS G +L+
Sbjct: 166 RVLEDDPEAAYT-TRGGKIPIRWTSPEAIA----------YRKFTSASDVWSYGIVLWEV 214
Query: 478 MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
M YG PY + N + + D+ +L + P L Q M C QKD RP
Sbjct: 215 MSYGERPYWEMSNQ-----DVIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRP 266
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 49/265 (18%)
Query: 280 EHEFKPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL 339
+H + +A+K++DL Q + NEV ++ Q V Y+ + L+VL
Sbjct: 67 KHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHFNVVEMYKSYL---VGEELWVL 120
Query: 340 ME--KGD--TDLSKYMR-NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPA 394
ME +G TD+ +R N ++ T+ + L A+ +HA G+IH D+K
Sbjct: 121 MEFLQGGALTDIVSQVRLNEEQIATVCEAV----------LQALAYLHAQGVIHRDIKSD 170
Query: 395 NFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSS 454
+ L + G V K+ DFG + D + GT +M+PE ++ +
Sbjct: 171 SILLTLD--------GRV-KLSDFGFCAQISKDVPK--RKXLVGTPYWMAPEVISRSLYA 219
Query: 455 GGGNTYRITYKSDVWSLGCILYNMIYGRTPY-SHIPNTWAKMLAIARHKDQIEFKPQLAN 513
+ D+WSLG ++ M+ G PY S P + A+ R +D P+L N
Sbjct: 220 T---------EVDIWSLGIMVIEMVDGEPPYFSDSP-----VQAMKRLRDSP--PPKLKN 263
Query: 514 NVTIPPTLLQSMKLCLQKDPKARPT 538
+ + P L ++ L +DP+ R T
Sbjct: 264 SHKVSPVLRDFLERMLVRDPQERAT 288
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 26/176 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++ + + + IH DL N L G + KI DFG+A +++D V
Sbjct: 168 YQVAKGMAFLASKNCIHRDLAARNILLTH---------GRITKICDFGLARDIKNDSNYV 218
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPN 490
K A + +M+PE+ T++SDVWS G L+ + G +PY +P
Sbjct: 219 VKGNARLPVKWMAPESIFNCV---------YTFESDVWSYGIFLWELFSLGSSPYPGMPV 269
Query: 491 TWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
+K + + ++ P+ A P + MK C DP RPT V I
Sbjct: 270 D-SKFYKMIKEGFRM-LSPEHA-----PAEMYDIMKTCWDADPLKRPTFKQIVQLI 318
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMAGF 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 44/240 (18%)
Query: 305 YLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---MEKGDTDLSKYMRNLNKMTTLP 361
+L E ++ + P +I++ V T SK + ++ ME G D ++R + T+
Sbjct: 64 FLGEASIMGQFDH-PNIIRLEGVV--TKSKPVMIVTEYMENGSLD--SFLRKHDAQFTV- 117
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I ++ + +K + G +H DL N L N+ V K+ DFG++
Sbjct: 118 ---IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL---------VCKVSDFGLS 165
Query: 422 CSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN- 477
L+DD + + T G + + SPEA YR T SDVWS G +L+
Sbjct: 166 RVLEDDPEAAYT-TRGGKIPIRWTSPEAIA----------YRKFTSASDVWSYGIVLWEV 214
Query: 478 MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
M YG PY + N + + D+ +L + P L Q M C QKD RP
Sbjct: 215 MSYGERPYWEMSNQ-----DVIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRP 266
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 44/240 (18%)
Query: 305 YLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---MEKGDTDLSKYMRNLNKMTTLP 361
+L E ++ + P +I++ V T SK + ++ ME G D ++R + T+
Sbjct: 93 FLGEASIMGQFDH-PNIIRLEGVV--TKSKPVMIVTEXMENGSLD--SFLRKHDAQFTV- 146
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I ++ + +K + G +H DL N L N+ V K+ DFG++
Sbjct: 147 ---IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL---------VCKVSDFGLS 194
Query: 422 CSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN- 477
L+DD + + T G + + SPEA YR T SDVWS G +L+
Sbjct: 195 RVLEDDPEAAYT-TRGGKIPIRWTSPEAI----------AYRKFTSASDVWSYGIVLWEV 243
Query: 478 MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
M YG PY + N + + D+ +L + P L Q M C QKD RP
Sbjct: 244 MSYGERPYWEMSNQ-----DVIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 46/175 (26%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
E+L + +H+ IH D+K AN L G+V K+ DFG+A L D T +
Sbjct: 128 EILKGLDYLHSEKKIHRDIKAANVLLSEQ--------GDV-KLADFGVAGQLTD--TQIK 176
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTW 492
++T GT +M+PE Q++ K+D+WSLG + G P S +
Sbjct: 177 RNTFVGTPFWMAPEVIQQSAYDS---------KADIWSLGITAIELAKGEPPNSDM---- 223
Query: 493 AKMLAIARHKDQIEFK-PQLANNVTIPPTLL--------QSMKLCLQKDPKARPT 538
H ++ F P+ NN PPTL+ + + CL KDP RPT
Sbjct: 224 --------HPMRVLFLIPK--NN---PPTLVGDFTKSFKEFIDACLNKDPSFRPT 265
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 38/258 (14%)
Query: 294 SDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMR 352
++ D ++ D L E ++ +L PY+++M + ++ ++ME + L+KY++
Sbjct: 54 NEANDPALKDELLAEANVMQQLDN-PYIVRM---IGICEAESWMLVMEMAELGPLNKYLQ 109
Query: 353 NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV 412
N+ N II ++H ++ + +K + + +H DL N L V +
Sbjct: 110 Q-NRHVKDKN--IIELVH--QVSMGMKYLEESNFVHRDLAARNVLLVTQ---------HY 155
Query: 413 LKIIDFGIACSLQDDKTSVHKDT-ASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSL 471
KI DFG++ +L+ D+ T + + +PE N Y+ + KSDVWS
Sbjct: 156 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSF 206
Query: 472 GCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQ 530
G +++ YG+ PY + + ++ A+ +E ++ P + M LC
Sbjct: 207 GVLMWEAFSYGQKPYRGMKGS--EVTAM------LEKGERMGCPAGCPREMYDLMNLCWT 258
Query: 531 KDPKARPTVGNSVTQINN 548
D + RP ++ N
Sbjct: 259 YDVENRPGFAAVELRLRN 276
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMAGF 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 44/240 (18%)
Query: 305 YLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---MEKGDTDLSKYMRNLNKMTTLP 361
+L E ++ + P +I++ V T SK + ++ ME G D ++R + T+
Sbjct: 93 FLGEASIMGQFDH-PNIIRLEGVV--TKSKPVMIVTEYMENGSLD--SFLRKHDAQFTV- 146
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I ++ + +K + G +H DL N L N+ V K+ DFG++
Sbjct: 147 ---IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL---------VCKVSDFGLS 194
Query: 422 CSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN- 477
L+DD + + T G + + SPEA YR T SDVWS G +L+
Sbjct: 195 RVLEDDPEAAYT-TRGGKIPIRWTSPEAIA----------YRKFTSASDVWSYGIVLWEV 243
Query: 478 MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
M YG PY + N + + D+ +L + P L Q M C QKD RP
Sbjct: 244 MSYGERPYWEMSNQ-----DVIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 26/176 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++ + + + IH DL N L G + KI DFG+A +++D V
Sbjct: 175 YQVAKGMAFLASKNCIHRDLAARNILLTH---------GRITKICDFGLARDIKNDSNYV 225
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPN 490
K A + +M+PE+ T++SDVWS G L+ + G +PY +P
Sbjct: 226 VKGNARLPVKWMAPESIFNCV---------YTFESDVWSYGIFLWELFSLGSSPYPGMPV 276
Query: 491 TWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
+K + + ++ P+ A P + MK C DP RPT V I
Sbjct: 277 D-SKFYKMIKEGFRM-LSPEHA-----PAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 101/240 (42%), Gaps = 44/240 (18%)
Query: 305 YLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---MEKGDTDLSKYMRNLNKMTTLP 361
+L E ++ + P +I++ V T SK + ++ ME G D ++R + T+
Sbjct: 93 FLGEASIMGQFDH-PNIIRLEGVV--TKSKPVMIVTEYMENGSLD--SFLRKHDAQFTV- 146
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I ++ + +K + G +H DL N L N+ V K+ DFG+
Sbjct: 147 ---IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL---------VCKVSDFGLG 194
Query: 422 CSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN- 477
L+DD + + T G + + SPEA YR T SDVWS G +L+
Sbjct: 195 RVLEDDPEAAYT-TRGGKIPIRWTSPEAI----------AYRKFTSASDVWSYGIVLWEV 243
Query: 478 MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
M YG PY + N + + D+ +L + P L Q M C QKD RP
Sbjct: 244 MSYGERPYWEMSNQ-----DVIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 44/240 (18%)
Query: 305 YLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---MEKGDTDLSKYMRNLNKMTTLP 361
+L E ++ + P +I++ V T SK + ++ ME G D ++R + T+
Sbjct: 81 FLGEASIMGQFDH-PNIIRLEGVV--TKSKPVMIVTEYMENGSLD--SFLRKHDAQFTV- 134
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I ++ + +K + G +H DL N L N+ V K+ DFG++
Sbjct: 135 ---IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL---------VCKVSDFGLS 182
Query: 422 CSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN- 477
L+DD + + T G + + SPEA YR T SDVWS G +L+
Sbjct: 183 RVLEDDPEAAYT-TRGGKIPIRWTSPEAI----------AYRKFTSASDVWSYGIVLWEV 231
Query: 478 MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
M YG PY + N + + D+ +L + P L Q M C QKD RP
Sbjct: 232 MSYGERPYWEMSNQ-----DVIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRP 283
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 38/258 (14%)
Query: 294 SDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMR 352
++ D ++ D L E ++ +L PY+++M + ++ ++ME + L+KY++
Sbjct: 44 NEANDPALKDELLAEANVMQQLDN-PYIVRM---IGICEAESWMLVMEMAELGPLNKYLQ 99
Query: 353 NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV 412
N+ N II ++H ++ + +K + + +H DL N L V +
Sbjct: 100 Q-NRHVKDKN--IIELVH--QVSMGMKYLEESNFVHRDLAARNVLLVTQ---------HY 145
Query: 413 LKIIDFGIACSLQDDKTSVHKDT-ASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSL 471
KI DFG++ +L+ D+ T + + +PE N Y+ + KSDVWS
Sbjct: 146 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI---------NYYKFSSKSDVWSF 196
Query: 472 GCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQ 530
G +++ YG+ PY + + ++ A+ +E ++ P + M LC
Sbjct: 197 GVLMWEAFSYGQKPYRGMKGS--EVTAM------LEKGERMGCPAGCPREMYDLMNLCWT 248
Query: 531 KDPKARPTVGNSVTQINN 548
D + RP ++ N
Sbjct: 249 YDVENRPGFAAVELRLRN 266
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 44/240 (18%)
Query: 305 YLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---MEKGDTDLSKYMRNLNKMTTLP 361
+L E ++ + P +I++ V T SK + ++ ME G D ++R + T+
Sbjct: 93 FLGEASIMGQFDH-PNIIRLEGVV--TKSKPVMIVTEYMENGSLD--SFLRKHDAQFTV- 146
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I ++ + +K + G +H DL N L N+ V K+ DFG++
Sbjct: 147 ---IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL---------VCKVSDFGLS 194
Query: 422 CSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN- 477
L+DD + + T G + + SPEA YR T SDVWS G +L+
Sbjct: 195 RVLEDDPEAAYT-TRGGKIPIRWTSPEAIA----------YRKFTSASDVWSYGIVLWEV 243
Query: 478 MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
M YG PY + N + + D+ +L + P L Q M C QKD RP
Sbjct: 244 MSYGERPYWEMSNQ-----DVIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 44/240 (18%)
Query: 305 YLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---MEKGDTDLSKYMRNLNKMTTLP 361
+L E ++ + P +I++ V T SK + ++ ME G D ++R + T+
Sbjct: 93 FLGEASIMGQFDH-PNIIRLEGVV--TKSKPVMIVTEYMENGSLD--SFLRKHDAQFTV- 146
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I ++ + +K + G +H DL N L N+ V K+ DFG++
Sbjct: 147 ---IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL---------VCKVSDFGLS 194
Query: 422 CSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN- 477
L+DD + + T G + + SPEA YR T SDVWS G +L+
Sbjct: 195 RVLEDDPEAAYT-TRGGKIPIRWTSPEAIA----------YRKFTSASDVWSYGIVLWEV 243
Query: 478 MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
M YG PY + N + + D+ +L + P L Q M C QKD RP
Sbjct: 244 MSYGERPYWEMSNQ-----DVIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+D+G+A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDYGLARHTDDEMTGY 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 44/240 (18%)
Query: 305 YLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---MEKGDTDLSKYMRNLNKMTTLP 361
+L E ++ + P +I++ V T SK + ++ ME G D ++R + T+
Sbjct: 93 FLGEASIMGQFDH-PNIIRLEGVV--TKSKPVMIVTEYMENGSLD--SFLRKHDAQFTV- 146
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I ++ + +K + G +H DL N L N+ V K+ DFG++
Sbjct: 147 ---IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL---------VCKVSDFGLS 194
Query: 422 CSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN- 477
L+DD + + T G + + SPEA YR T SDVWS G +L+
Sbjct: 195 RVLEDDPEAAYT-TRGGKIPIRWTSPEAIA----------YRKFTSASDVWSYGIVLWEV 243
Query: 478 MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
M YG PY + N + + D+ +L + P L Q M C QKD RP
Sbjct: 244 MSYGERPYWEMSNQ-----DVIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 112/255 (43%), Gaps = 39/255 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A+ + + T S+ + +L E + + P+++K+ + + ++++ME
Sbjct: 39 MAVAIKTCKNCTSDSVREKFLQEALTMRQFDH-PHIVKLIGVITENP---VWIIMEL--C 92
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L + +R+ ++ + +I++ Y++ A+ + + +H D+ N L +
Sbjct: 93 TLGE-LRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVL-----VSA 146
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYRIT 463
DC+ K+ DFG++ ++D S + + G L +M+PE+ N R T
Sbjct: 147 TDCV----KLGDFGLSRYMED---STYYKASKGKLPIKWMAPESI---------NFRRFT 190
Query: 464 YKSDVWSLG-CILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLL 522
SDVW G C+ +++G P+ + N I R IE +L PPTL
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR----IENGERLPMPPNCPPTLY 242
Query: 523 QSMKLCLQKDPKARP 537
M C DP RP
Sbjct: 243 SLMTKCWAYDPSRRP 257
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 26/176 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++ + + + IH DL N L G + KI DFG+A +++D V
Sbjct: 175 YQVAKGMAFLASKNCIHRDLAARNILLTH---------GRITKICDFGLARHIKNDSNYV 225
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPN 490
K A + +M+PE+ T++SDVWS G L+ + G +PY +P
Sbjct: 226 VKGNARLPVKWMAPESIFNCV---------YTFESDVWSYGIFLWELFSLGSSPYPGMPV 276
Query: 491 TWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
+K + + ++ P+ A P + MK C DP RPT V I
Sbjct: 277 D-SKFYKMIKEGFRM-LSPEHA-----PAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 26/199 (13%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+KV+ + ++ +S L EV+LL +L P + K++++ D +L + G +
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLDH-PNIXKLYEFFEDKGYFYLVGEVYTG-GE 112
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L + + + + + II ++L + H I+H DLKP N L L+
Sbjct: 113 LFDEIISRKRFSEVDAARII-----RQVLSGITYXHKNKIVHRDLKPENLL-----LESK 162
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
N+ +IIDFG++ + K K GT Y++PE T K
Sbjct: 163 SKDANI-RIIDFGLSTHFEASKKXKDK---IGTAYYIAPEVLHGTYDE----------KC 208
Query: 467 DVWSLGCILYNMIYGRTPY 485
DVWS G ILY ++ G P+
Sbjct: 209 DVWSTGVILYILLSGCPPF 227
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 31/139 (22%)
Query: 354 LNKMTTLPNTMIIIIMHWY-EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV 412
+N+ +L + + +H + ++ AV+ +H+ G++H DLKP+N F + +V
Sbjct: 152 MNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFT---------MDDV 202
Query: 413 LKIIDFGIACSLQDDKT-----------SVHKDTASGTLNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+ ++ D+ + H GT YMSPE GN Y
Sbjct: 203 VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQV-GTKLYMSPEQI-------HGNNY- 253
Query: 462 ITYKSDVWSLGCILYNMIY 480
++K D++SLG IL+ ++Y
Sbjct: 254 -SHKVDIFSLGLILFELLY 271
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 28/153 (18%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
IH DL+ AN L +++ C KI DFG+A ++D++ + ++ A + + +PE
Sbjct: 131 IHRDLRAANVLVSESLM----C-----KIADFGLARVIEDNEYTA-REGAKFPIKWTAPE 180
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQI 505
A N T KS+VWS G +LY ++ YG+ PY N A +++ ++
Sbjct: 181 AI---------NFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTN--ADVMSALSQGYRM 229
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
P++ N P L MK+C ++ + RPT
Sbjct: 230 ---PRMEN---CPDELYDIMKMCWKEKAEERPT 256
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMAGF 178
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 179 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 29/150 (19%)
Query: 336 LYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPAN 395
Y++M TDL K M M + ++ Y+ML +K IH+AG++H DLKP
Sbjct: 122 FYLVMPFMQTDLQKIM----GMEFSEEKIQYLV---YQMLKGLKYIHSAGVVHRDLKP-- 172
Query: 396 FLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSG 455
GN+ DC LKI+DFG+A + T T Y +PE
Sbjct: 173 ----GNLAVNEDC---ELKILDFGLARHADAEMTGY-----VVTRWYRAPEVI------- 213
Query: 456 GGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ D+WS+GCI+ M+ G+T +
Sbjct: 214 -LSWMHYNQTVDIWSVGCIMAEMLTGKTLF 242
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 26/187 (13%)
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
T+ +I + +++ ++ + + IH DL N L NV+KI DFG+A
Sbjct: 196 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---------NVVKICDFGLAR 246
Query: 423 SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YG 481
+ D V K A L +M+PE Y T +SDVWS G +L+ + G
Sbjct: 247 DIYKDPDYVRKGDARLPLKWMAPETIFD-------RVY--TIQSDVWSFGVLLWEIFSLG 297
Query: 482 RTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
+PY P R K+ + A + T P + Q+M C +P RPT
Sbjct: 298 ASPY---PGVKIDEEFCRRLKEGTRMR---APDYTT-PEMYQTMLDCWHGEPSQRPTFSE 350
Query: 542 SVTQINN 548
V + N
Sbjct: 351 LVEHLGN 357
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 26/176 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++ + + + IH DL N L G + KI DFG+A +++D V
Sbjct: 152 YQVAKGMAFLASKNCIHRDLAARNILLTH---------GRITKICDFGLARDIKNDSNYV 202
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPN 490
K A + +M+PE+ T++SDVWS G L+ + G +PY +P
Sbjct: 203 VKGNARLPVKWMAPESIFNCV---------YTFESDVWSYGIFLWELFSLGSSPYPGMPV 253
Query: 491 TWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
+K + + ++ P+ A P + MK C DP RPT V I
Sbjct: 254 D-SKFYKMIKEGFRM-LSPEHA-----PAEMYDIMKTCWDADPLKRPTFKQIVQLI 302
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 44/240 (18%)
Query: 305 YLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---MEKGDTDLSKYMRNLNKMTTLP 361
+L E ++ + P +I++ V T SK + ++ ME G D ++R + T+
Sbjct: 91 FLGEASIMGQFDH-PNIIRLEGVV--TKSKPVMIVTEYMENGSLD--SFLRKHDAQFTV- 144
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I ++ + +K + G +H DL N L N+ V K+ DFG++
Sbjct: 145 ---IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL---------VCKVSDFGLS 192
Query: 422 CSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN- 477
L+DD + + T G + + SPEA YR T SDVWS G +L+
Sbjct: 193 RVLEDDPEAAYT-TRGGKIPIRWTSPEAIA----------YRKFTSASDVWSYGIVLWEV 241
Query: 478 MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
M YG PY + N + + D+ +L + P L Q M C QKD RP
Sbjct: 242 MSYGERPYWEMSNQ-----DVIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRP 293
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y+ML +K IH+AG++H DLKP GN+ DC LKI+DFG+A + T
Sbjct: 133 YQMLKGLKYIHSAGVVHRDLKP------GNLAVNEDC---ELKILDFGLARHADAEMTGY 183
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE S T D+WS+GCI+ M+ G+T +
Sbjct: 184 -----VVTRWYRAPEVI--LSWMHYNQT------VDIWSVGCIMAEMLTGKTLF 224
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 26/187 (13%)
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
T+ +I + +++ ++ + + IH DL N L NV+KI DFG+A
Sbjct: 198 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---------NVVKICDFGLAR 248
Query: 423 SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YG 481
+ D V K A L +M+PE Y T +SDVWS G +L+ + G
Sbjct: 249 DIYKDPDYVRKGDARLPLKWMAPETIFD-------RVY--TIQSDVWSFGVLLWEIFSLG 299
Query: 482 RTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
+PY P R K+ + A + T P + Q+M C +P RPT
Sbjct: 300 ASPY---PGVKIDEEFCRRLKEGTRMR---APDYTT-PEMYQTMLDCWHGEPSQRPTFSE 352
Query: 542 SVTQINN 548
V + N
Sbjct: 353 LVEHLGN 359
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 26/187 (13%)
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
T+ +I + +++ ++ + + IH DL N L NV+KI DFG+A
Sbjct: 146 TLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEK---------NVVKICDFGLAR 196
Query: 423 SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YG 481
+ D V K A L +M+PE Y T +SDVWS G +L+ + G
Sbjct: 197 DIXKDPDXVRKGDARLPLKWMAPETIFD-------RVY--TIQSDVWSFGVLLWEIFSLG 247
Query: 482 RTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
+PY P R K+ + A + T P + Q+M C +P RPT
Sbjct: 248 ASPY---PGVKIDEEFCRRLKEGTRMR---APDYTT-PEMYQTMLDCWHGEPSQRPTFSE 300
Query: 542 SVTQINN 548
V + N
Sbjct: 301 LVEHLGN 307
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMXG- 201
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 202 ----XVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 27/199 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK V L D D+ + S L E+ LL +L+ ++++HD ++ + K L ++ E D
Sbjct: 30 VALKRVRLDD-DDEGVPSSALREICLLKELKH-KNIVRLHDVLH--SDKKLTLVFEFCDQ 85
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL KY + N P I+ +++L + H+ ++H DLKP N L N
Sbjct: 86 DLKKYFDSCNGDLD-PE---IVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRN---- 137
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
LK+ DFG+A + + TL Y P+ G Y +
Sbjct: 138 -----GELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDVL------FGAKLYSTSI- 183
Query: 466 SDVWSLGCILYNMIYGRTP 484
D+WS GCI + P
Sbjct: 184 -DMWSAGCIFAELANAARP 201
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 38/169 (22%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
IH DL N L NV+KI DFG+A + D V K A L +M+PE
Sbjct: 166 IHRDLAARNILLSEK---------NVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPE 216
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQI 505
T +SDVWS G +L+ + G +PY + K
Sbjct: 217 TIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV-------------KIDE 254
Query: 506 EFKPQLANNVTI------PPTLLQSMKLCLQKDPKARPTVGNSVTQINN 548
EF +L + P + Q+M C +P RPT V + N
Sbjct: 255 EFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 303
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 26/187 (13%)
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
T+ +I + +++ ++ + + IH DL N L NV+KI DFG+A
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---------NVVKICDFGLAR 196
Query: 423 SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YG 481
+ D V K A L +M+PE Y T +SDVWS G +L+ + G
Sbjct: 197 DIXKDPDXVRKGDARLPLKWMAPETIFD-------RVY--TIQSDVWSFGVLLWEIFSLG 247
Query: 482 RTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
+PY P R K+ + A + T P + Q+M C +P RPT
Sbjct: 248 ASPY---PGVKIDEEFCRRLKEGTRMR---APDYTT-PEMYQTMLDCWHGEPSQRPTFSE 300
Query: 542 SVTQINN 548
V + N
Sbjct: 301 LVEHLGN 307
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 38/193 (19%)
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
T+ +I + +++ ++ + + IH DL N L NV+KI DFG+A
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---------NVVKICDFGLAR 187
Query: 423 SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YG 481
+ D V K A L +M+PE Y T +SDVWS G +L+ + G
Sbjct: 188 DIXKDPDXVRKGDARLPLKWMAPETIFD-------RVY--TIQSDVWSFGVLLWEIFSLG 238
Query: 482 RTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTI------PPTLLQSMKLCLQKDPKA 535
+PY + K EF +L + P + Q+M C +P
Sbjct: 239 ASPYPGV-------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ 285
Query: 536 RPTVGNSVTQINN 548
RPT V + N
Sbjct: 286 RPTFSELVEHLGN 298
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 113/255 (44%), Gaps = 39/255 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME-KGD 344
+A+KV L T+++ + + E +++ +L PY++++ + ++ L ++ME G
Sbjct: 40 VAIKV--LKQGTEKADTEEMMREAQIMHQLDN-PYIVRL---IGVCQAEALMLVMEMAGG 93
Query: 345 TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLK 404
L K++ + K +P + + ++H ++ + +K + +H DL N L V
Sbjct: 94 GPLHKFL--VGKREEIPVSNVAELLH--QVSMGMKYLEEKNFVHRDLAARNVLLVNR--- 146
Query: 405 IIDCIGNVLKIIDFGIACSL-QDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRIT 463
+ KI DFG++ +L DD + L + +PE N + +
Sbjct: 147 ------HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI---------NFRKFS 191
Query: 464 YKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLL 522
+SDVWS G ++ + YG+ PY + +++A ++E P+ PP L
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGKRMECPPE------CPPELY 243
Query: 523 QSMKLCLQKDPKARP 537
M C + RP
Sbjct: 244 ALMSDCWIYKWEDRP 258
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N + + LKI+DFG+A D+ T
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLAVNED---------SELKILDFGLARHTDDEMTGY 188
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 189 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DFG+A D+
Sbjct: 155 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFGLARHTDDEMXGY 205
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 206 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N + + LKI+DFG+A D+ T
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLAVNED---------SELKILDFGLARHTDDEMTGY 184
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 185 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
EV +L ++Q P VI +H+ VY+ + + +L +L ++ +T T +
Sbjct: 64 EVSILKEIQ-HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL- 120
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG-NVLKIIDCIGNVLKIIDFGIACSLQD 426
++L V +H+ I H DLKP N + + NV K +KIIDFG+A +
Sbjct: 121 ----KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK------PRIKIIDFGLAHKI-- 168
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
D + K+ GT +++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 169 DFGNEFKNIF-GTPEFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF- 217
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ +T + LA + EF+ + +N + ++ L KDPK R T+ +S+
Sbjct: 218 -LGDTKQETLANVSAVN-YEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSL 270
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 38/193 (19%)
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
T+ +I + +++ ++ + + IH DL N L NV+KI DFG+A
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---------NVVKICDFGLAR 187
Query: 423 SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YG 481
+ D V K A L +M+PE Y T +SDVWS G +L+ + G
Sbjct: 188 DIXKDPDXVRKGDARLPLKWMAPETIFD-------RVY--TIQSDVWSFGVLLWEIFSLG 238
Query: 482 RTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTI------PPTLLQSMKLCLQKDPKA 535
+PY + K EF +L + P + Q+M C +P
Sbjct: 239 ASPYPGV-------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ 285
Query: 536 RPTVGNSVTQINN 548
RPT V + N
Sbjct: 286 RPTFSELVEHLGN 298
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 26/187 (13%)
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
T+ +I + +++ ++ + + IH DL N L NV+KI DFG+A
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---------NVVKICDFGLAR 196
Query: 423 SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YG 481
+ D V K A L +M+PE Y T +SDVWS G +L+ + G
Sbjct: 197 DIXKDPDXVRKGDARLPLKWMAPETIFD-------RVY--TIQSDVWSFGVLLWEIFSLG 247
Query: 482 RTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
+PY P R K+ + A + T P + Q+M C +P RPT
Sbjct: 248 ASPY---PGVKIDEEFCRRLKEGTRMR---APDYTT-PEMYQTMLDCWHGEPSQRPTFSE 300
Query: 542 SVTQINN 548
V + N
Sbjct: 301 LVEHLGN 307
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 28/178 (15%)
Query: 306 LNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMI 365
+ EV LL L+ ++ +HD ++ K L ++ E D DL +Y+ + + + N +
Sbjct: 48 IREVSLLKDLKHAN-IVTLHDIIH--TEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKL 104
Query: 366 IIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQ 425
+ +++L + H ++H DLKP N L I+ G LK+ DFG+A + +
Sbjct: 105 FL----FQLLRGLAYCHRQKVLHRDLKPQNLL--------INERGE-LKLADFGLARA-K 150
Query: 426 DDKTSVHKDTASGTLNYMSPE-AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
T + D TL Y P+ G T S + D+W +GCI Y M GR
Sbjct: 151 SIPTKTY-DNEVVTLWYRPPDILLGSTDYST---------QIDMWGVGCIFYEMATGR 198
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 31/198 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ T ++++ ++ A++ + IH DL N L N
Sbjct: 114 NLLDYLRECNREEV---TAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 166
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+V+K+ DFG++ + D + H A + + +PE+ NT+ I K
Sbjct: 167 -----HVVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAY-------NTFSI--K 211
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ D +E ++ PP + +
Sbjct: 212 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYDLLEKGYRMEQPEGCPPKVYEL 263
Query: 525 MKLCLQKDPKARPTVGNS 542
M+ C + P RP+ +
Sbjct: 264 MRACWKWSPADRPSFAET 281
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 38/193 (19%)
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
T+ +I + +++ ++ + + IH DL N L NV+KI DFG+A
Sbjct: 191 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---------NVVKICDFGLAR 241
Query: 423 SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YG 481
+ D V K A L +M+PE Y T +SDVWS G +L+ + G
Sbjct: 242 DIYKDPDYVRKGDARLPLKWMAPETIFD-------RVY--TIQSDVWSFGVLLWEIFSLG 292
Query: 482 RTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTI------PPTLLQSMKLCLQKDPKA 535
+PY + K EF +L + P + Q+M C +P
Sbjct: 293 ASPYPGV-------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ 339
Query: 536 RPTVGNSVTQINN 548
RPT V + N
Sbjct: 340 RPTFSELVEHLGN 352
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYV-LMEKGD 344
+A+K V+ + + I +LNE ++ + C +V+++ V + + LM +GD
Sbjct: 43 VAIKTVNEAASMRERI--EFLNEASVMKEFN-CHHVVRLLGVVSQGQPTLVIMELMTRGD 99
Query: 345 TDLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFV 399
L Y+R+L N P ++ +I E+ + ++A +H DL N +
Sbjct: 100 --LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 157
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGG 457
+ +KI DFG+ + + T + G L +MSPE+ G
Sbjct: 158 EDF---------TVKIGDFGMTRDIXE--TDXXRKGGKGLLPVRWMSPESL----KDGVF 202
Query: 458 NTYRITYKSDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVT 516
TY SDVWS G +L+ + PY + N ++L ++ KP
Sbjct: 203 TTY-----SDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRFVMEGGLLD-KPD-----N 249
Query: 517 IPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNPE 551
P LL+ M++C Q +PK RP+ ++ I E
Sbjct: 250 CPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEME 284
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 38/193 (19%)
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
T+ +I + +++ ++ + + IH DL N L NV+KI DFG+A
Sbjct: 189 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---------NVVKICDFGLAR 239
Query: 423 SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YG 481
+ D V K A L +M+PE Y T +SDVWS G +L+ + G
Sbjct: 240 DIYKDPDYVRKGDARLPLKWMAPETIFD-------RVY--TIQSDVWSFGVLLWEIFSLG 290
Query: 482 RTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTI------PPTLLQSMKLCLQKDPKA 535
+PY + K EF +L + P + Q+M C +P
Sbjct: 291 ASPYPGV-------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ 337
Query: 536 RPTVGNSVTQINN 548
RPT V + N
Sbjct: 338 RPTFSELVEHLGN 350
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N + LKI+DFG+A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNED---------XELKILDFGLARHTDDEMTGY 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 25/198 (12%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK V L +++ + + E+ L+ +L+ +++++D ++ T +K L ++ E D
Sbjct: 33 VALKEVKLD--SEEGTPSTAIREISLMKELKH-ENIVRLYDVIH-TENK-LTLVFEFMDN 87
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHW-YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLK 404
DL KYM + T + ++ ++ +++L + H I+H DLKP N L
Sbjct: 88 DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLL------- 140
Query: 405 IIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
I+ G LK+ DFG+A + + + TL Y +P+ G TY +
Sbjct: 141 -INKRGQ-LKLGDFGLARAFGIPVNTFSSEVV--TLWYRAPDVLM------GSRTYSTSI 190
Query: 465 KSDVWSLGCILYNMIYGR 482
D+WS GCIL MI G+
Sbjct: 191 --DIWSCGCILAEMITGK 206
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
EV +L ++Q P VI +H+ VY+ + + +L +L ++ +T T +
Sbjct: 63 EVSILKEIQ-HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL- 119
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG-NVLKIIDCIGNVLKIIDFGIACSLQD 426
++L V +H+ I H DLKP N + + NV K +KIIDFG+A +
Sbjct: 120 ----KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK------PRIKIIDFGLAHKI-- 167
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
D + K+ GT +++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 168 DFGNEFKNIF-GTPEFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF- 216
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ +T + LA + EF+ + +N + ++ L KDPK R T+ +S+
Sbjct: 217 -LGDTKQETLANVSAVN-YEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSL 269
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 26/187 (13%)
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
T+ +I + +++ ++ + + IH DL N L NV+KI DFG+A
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---------NVVKICDFGLAR 196
Query: 423 SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YG 481
+ D V K A L +M+PE Y T +SDVWS G +L+ + G
Sbjct: 197 DIYKDPDXVRKGDARLPLKWMAPETIFD-------RVY--TIQSDVWSFGVLLWEIFSLG 247
Query: 482 RTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
+PY P R K+ + A + T P + Q+M C +P RPT
Sbjct: 248 ASPY---PGVKIDEEFCRRLKEGTRMR---APDYTT-PEMYQTMLDCWHGEPSQRPTFSE 300
Query: 542 SVTQINN 548
V + N
Sbjct: 301 LVEHLGN 307
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 44/267 (16%)
Query: 284 KPLALKVVDLSDITDQSIADSYL-NEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK 342
K ALK + S + DS L NE+ +L K++ ++ + D +Y++ + + V+
Sbjct: 35 KLFALKCIKKSP----AFRDSSLENEIAVLKKIKH-ENIVTLED-IYESTTHYYLVMQLV 88
Query: 343 GDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
+L + T +++I ++L AVK +H GI+H DLKP N L++
Sbjct: 89 SGGELFDRILERGVYTEKDASLVI-----QQVLSAVKYLHENGIVHRDLKPENLLYLTPE 143
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI 462
+ + I DFG++ Q+ S TA GT Y++PE Q S
Sbjct: 144 E------NSKIMITDFGLSKMEQNGIMS----TACGTPGYVAPEVLAQKPYSKA------ 187
Query: 463 TYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLL 522
D WS+G I Y ++ G P+ T +K+ + + EF+ ++++
Sbjct: 188 ---VDCWSIGVITYILLCGYPPFYE--ETESKLFEKIK-EGYYEFESPFWDDIS------ 235
Query: 523 QSMK--LC--LQKDPKARPTVGNSVTQ 545
+S K +C L+KDP R T +++
Sbjct: 236 ESAKDFICHLLEKDPNERYTCEKALSH 262
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V + LKI+DFG+A D+ T
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSN-LAVNEDXE--------LKILDFGLARHTDDEMTGY 187
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 188 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
EV +L ++Q P VI +H+ VY+ + + +L +L ++ +T T +
Sbjct: 63 EVSILKEIQ-HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL- 119
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG-NVLKIIDCIGNVLKIIDFGIACSLQD 426
++L V +H+ I H DLKP N + + NV K +KIIDFG+A +
Sbjct: 120 ----KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK------PRIKIIDFGLAHKI-- 167
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
D + K+ GT +++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 168 DFGNEFKNIF-GTPEFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF- 216
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ +T + LA + EF+ + +N + ++ L KDPK R T+ +S+
Sbjct: 217 -LGDTKQETLANVSAVN-YEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSL 269
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
EV +L ++Q P VI +H+ VY+ + + +L +L ++ +T T +
Sbjct: 64 EVSILKEIQH-PNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL- 120
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG-NVLKIIDCIGNVLKIIDFGIACSLQD 426
++L V +H+ I H DLKP N + + NV K +KIIDFG+A +
Sbjct: 121 ----KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK------PRIKIIDFGLAHKI-- 168
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
D + K+ GT +++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 169 DFGNEFKNIF-GTPEFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF- 217
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ +T + LA + EF+ + +N + ++ L KDPK R T+ +S+
Sbjct: 218 -LGDTKQETLANVSAVN-YEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSL 270
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+AGIIH DLKP+ NV DC L+I+DFG+A ++ T
Sbjct: 130 YQLLRGLKYIHSAGIIHRDLKPS------NVAVNEDC---ELRILDFGLARQADEEMTGY 180
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ G+ +
Sbjct: 181 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLQGKALF 221
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 48/269 (17%)
Query: 295 DITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT-DLSKYMR- 352
D T++ ++D ++E+E++ + +I + T LYV++E +L +Y+R
Sbjct: 78 DATEKDLSD-LVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRA 134
Query: 353 ----------NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++N++ T ++ Y++ ++ + + IH DL N L N
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN- 193
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTY 460
NV+KI DFG+A + + +K+T +G L +M+PEA
Sbjct: 194 --------NVMKIADFGLARDINN--IDYYKNTTNGRLPVKWMAPEALFDRV-------- 235
Query: 461 RITYKSDVWSLGCILYNMI-YGRTPYSHIP-NTWAKMLAIARHKDQIEFKPQLANNVTIP 518
T++SDVWS G +++ + G +PY IP K+L D KP N
Sbjct: 236 -YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD----KPANCTN---- 286
Query: 519 PTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
L M+ C P RPT V ++
Sbjct: 287 -ELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V + LKI+DFG+A D+ T
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSN-LAVNEDXE--------LKILDFGLARHTDDEMTGY 187
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 188 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
EV +L ++Q P VI +H+ VY+ + + +L +L ++ +T T +
Sbjct: 64 EVSILKEIQ-HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL- 120
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG-NVLKIIDCIGNVLKIIDFGIACSLQD 426
++L V +H+ I H DLKP N + + NV K +KIIDFG+A +
Sbjct: 121 ----KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK------PRIKIIDFGLAHKI-- 168
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
D + K+ GT +++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 169 DFGNEFKNIF-GTPEFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF- 217
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ +T + LA + EF+ + +N + ++ L KDPK R T+ +S+
Sbjct: 218 -LGDTKQETLANVSAVN-YEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSL 270
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N + LKI+DFG+A D+ T
Sbjct: 143 YQILRGLKYIHSADIIHRDLKPSNLAVNED---------XELKILDFGLARHTDDEMTGY 193
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 194 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 38/193 (19%)
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
T+ +I + +++ ++ + + IH DL N L NV+KI DFG+A
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---------NVVKICDFGLAR 187
Query: 423 SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YG 481
+ D V K A L +M+PE T +SDVWS G +L+ + G
Sbjct: 188 DIYKDPDYVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLG 238
Query: 482 RTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTI------PPTLLQSMKLCLQKDPKA 535
+PY + K EF +L + P + Q+M C +P
Sbjct: 239 ASPYPGV-------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ 285
Query: 536 RPTVGNSVTQINN 548
RPT V + N
Sbjct: 286 RPTFSELVEHLGN 298
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N + + LKI+DFG+ C DD+ +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLAVNED---------SELKILDFGL-CRHTDDEMTG 181
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 182 Y----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
EV +L ++Q P VI +H+ VY+ + + +L +L ++ +T T +
Sbjct: 64 EVSILKEIQ-HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL- 120
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG-NVLKIIDCIGNVLKIIDFGIACSLQD 426
++L V +H+ I H DLKP N + + NV K +KIIDFG+A +
Sbjct: 121 ----KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK------PRIKIIDFGLAHKI-- 168
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
D + K+ GT +++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 169 DFGNEFKNIF-GTPEFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF- 217
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ +T + LA + EF+ + +N + ++ L KDPK R T+ +S+
Sbjct: 218 -LGDTKQETLANVSAVN-YEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSL 270
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 77/187 (41%), Gaps = 26/187 (13%)
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
T+ +I + +++ ++ + + IH DL N L NV+KI DFG+A
Sbjct: 148 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---------NVVKICDFGLAR 198
Query: 423 SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YG 481
+ D V K A L +M+PE T +SDVWS G +L+ + G
Sbjct: 199 DIYKDPDYVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLG 249
Query: 482 RTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
+PY P R K+ + A + T P + Q+M C +P RPT
Sbjct: 250 ASPY---PGVKIDEEFCRRLKEGTRMR---APDYTT-PEMYQTMLDCWHGEPSQRPTFSE 302
Query: 542 SVTQINN 548
V + N
Sbjct: 303 LVEHLGN 309
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
EV +L ++Q P VI +H+ VY+ + + +L +L ++ +T T +
Sbjct: 64 EVSILKEIQ-HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL- 120
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG-NVLKIIDCIGNVLKIIDFGIACSLQD 426
++L V +H+ I H DLKP N + + NV K +KIIDFG+A +
Sbjct: 121 ----KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK------PRIKIIDFGLAHKI-- 168
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
D + K+ GT +++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 169 DFGNEFKNIF-GTPEFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF- 217
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ +T + LA + EF+ + +N + ++ L KDPK R T+ +S+
Sbjct: 218 -LGDTKQETLANVSAVN-YEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSL 270
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 48/269 (17%)
Query: 295 DITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT-DLSKYMR- 352
D T++ ++D ++E+E++ + +I + T LYV++E +L +Y+R
Sbjct: 78 DATEEDLSD-LVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRA 134
Query: 353 ----------NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++N++ T ++ Y++ ++ + + IH DL N L N
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN- 193
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTY 460
NV+KI DFG+A + + +K T +G L +M+PEA
Sbjct: 194 --------NVMKIADFGLARDINN--IDYYKKTTNGRLPVKWMAPEALFDRV-------- 235
Query: 461 RITYKSDVWSLGCILYNMI-YGRTPYSHIP-NTWAKMLAIARHKDQIEFKPQLANNVTIP 518
T++SDVWS G +++ + G +PY IP K+L D KP N
Sbjct: 236 -YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD----KPANCTN---- 286
Query: 519 PTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
L M+ C P RPT V ++
Sbjct: 287 -ELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
EV +L ++Q P VI +H+ VY+ + + +L +L ++ +T T +
Sbjct: 64 EVSILKEIQ-HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL- 120
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG-NVLKIIDCIGNVLKIIDFGIACSLQD 426
++L V +H+ I H DLKP N + + NV K +KIIDFG+A +
Sbjct: 121 ----KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK------PRIKIIDFGLAHKI-- 168
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
D + K+ GT +++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 169 DFGNEFKNIF-GTPEFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF- 217
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ +T + LA + EF+ + +N + ++ L KDPK R T+ +S+
Sbjct: 218 -LGDTKQETLANVSAVN-YEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSL 270
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+ FG+A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILGFGLARHTDDEMTGY 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 31/192 (16%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMII 366
N+ L+ + P++I+M D ++ ++++M+ + + L K PN +
Sbjct: 54 NDERLMLSIVTHPFIIRMWGTFQD--AQQIFMIMDY--IEGGELFSLLRKSQRFPNP--V 107
Query: 367 IIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQD 426
+ E+ LA++ +H+ II+ DLKP N L +D G++ KI DFG A + D
Sbjct: 108 AKFYAAEVCLALEYLHSKDIIYRDLKPENIL--------LDKNGHI-KITDFGFAKYVPD 158
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY- 485
+ GT +Y++PE + D WS G ++Y M+ G TP+
Sbjct: 159 VTYXL-----CGTPDYIAPEVVSTKPYNKS---------IDWWSFGILIYEMLAGYTPFY 204
Query: 486 -SHIPNTWAKML 496
S+ T+ K+L
Sbjct: 205 DSNTMKTYEKIL 216
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 38/193 (19%)
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
T+ +I + +++ ++ + + IH DL N L NV+KI DFG+A
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---------NVVKICDFGLAR 187
Query: 423 SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YG 481
+ D V K A L +M+PE T +SDVWS G +L+ + G
Sbjct: 188 DIYKDPDYVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLG 238
Query: 482 RTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTI------PPTLLQSMKLCLQKDPKA 535
+PY + K EF +L + P + Q+M C +P
Sbjct: 239 ASPYPGV-------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ 285
Query: 536 RPTVGNSVTQINN 548
RPT V + N
Sbjct: 286 RPTFSELVEHLGN 298
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 77/187 (41%), Gaps = 26/187 (13%)
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
T+ +I + +++ ++ + + IH DL N L NV+KI DFG+A
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---------NVVKICDFGLAR 196
Query: 423 SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YG 481
+ D V K A L +M+PE T +SDVWS G +L+ + G
Sbjct: 197 DIYKDPDYVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLG 247
Query: 482 RTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
+PY P R K+ + A + T P + Q+M C +P RPT
Sbjct: 248 ASPY---PGVKIDEEFCRRLKEGTRMR---APDYTT-PEMYQTMLDCWHGEPSQRPTFSE 300
Query: 542 SVTQINN 548
V + N
Sbjct: 301 LVEHLGN 307
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
EV +L ++Q P VI +H+ VY+ + + +L +L ++ +T T +
Sbjct: 64 EVSILKEIQ-HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL- 120
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG-NVLKIIDCIGNVLKIIDFGIACSLQD 426
++L V +H+ I H DLKP N + + NV K +KIIDFG+A +
Sbjct: 121 ----KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK------PRIKIIDFGLAHKI-- 168
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
D + K+ GT +++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 169 DFGNEFKNIF-GTPEFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF- 217
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ +T + LA + EF+ + +N + ++ L KDPK R T+ +S+
Sbjct: 218 -LGDTKQETLANVSAVN-YEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSL 270
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 48/270 (17%)
Query: 295 DITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT-DLSKYMR- 352
D T++ ++D ++E+E++ + +I + T LYV++E +L +Y+R
Sbjct: 124 DATEKDLSD-LVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRA 180
Query: 353 ----------NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++N++ T ++ Y++ ++ + + IH DL N L N
Sbjct: 181 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN- 239
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTY 460
NV+KI DFG+A + + +K T +G L +M+PEA
Sbjct: 240 --------NVMKIADFGLARDINN--IDYYKKTTNGRLPVKWMAPEALFDRV-------- 281
Query: 461 RITYKSDVWSLGCILYNMI-YGRTPYSHIP-NTWAKMLAIARHKDQIEFKPQLANNVTIP 518
T++SDVWS G +++ + G +PY IP K+L D KP N
Sbjct: 282 -YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD----KPANCTN---- 332
Query: 519 PTLLQSMKLCLQKDPKARPTVGNSVTQINN 548
L M+ C P RPT V ++
Sbjct: 333 -ELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
EV +L ++Q P VI +H+ VY+ + + +L +L ++ +T T +
Sbjct: 64 EVSILKEIQ-HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL- 120
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG-NVLKIIDCIGNVLKIIDFGIACSLQD 426
++L V +H+ I H DLKP N + + NV K +KIIDFG+A +
Sbjct: 121 ----KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK------PRIKIIDFGLAHKI-- 168
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
D + K+ GT +++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 169 DFGNEFKNIF-GTPEFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF- 217
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ +T + LA + EF+ + +N + ++ L KDPK R T+ +S+
Sbjct: 218 -LGDTKQETLANVSAVN-YEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSL 270
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 26/187 (13%)
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
T+ +I + +++ ++ + + IH DL N L NV+KI DFG+A
Sbjct: 183 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---------NVVKICDFGLAR 233
Query: 423 SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YG 481
+ D V K A L +M+PE Y T +SDVWS G +L+ + G
Sbjct: 234 DIYKDPDYVRKGDARLPLKWMAPETIFD-------RVY--TIQSDVWSFGVLLWEIFSLG 284
Query: 482 RTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
+PY P R K+ + A + T P + Q+M C +P RPT
Sbjct: 285 ASPY---PGVKIDEEFCRRLKEGTRMR---APDYTT-PEMYQTMLDCWHGEPSQRPTFSE 337
Query: 542 SVTQINN 548
V + N
Sbjct: 338 LVEHLGN 344
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+HA IIH D+K N +F+ G +KI DFG+A S + +G++
Sbjct: 148 LHAKNIIHRDMKSNN-IFLHE--------GLTVKIGDFGLATVKSRWSGSQQVEQPTGSV 198
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIAR 500
+M+PE ++ +++SDV+S G +LY ++ G PYSHI N + + R
Sbjct: 199 LWMAPEVIRMQDNNP------FSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR 252
Query: 501 HKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
+ N P + + + C++K + RP
Sbjct: 253 GYASPDLSKLYKN---CPKAMKRLVADCVKKVKEERP 286
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 336 LYVLME-KGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPA 394
L+++ME G ++ ++N K TL I I E+L + +H +IH D+K
Sbjct: 102 LWLVMEFCGAGSVTDLIKN-TKGNTLKEEWIAYICR--EILRGLSHLHQHKVIHRDIKGQ 158
Query: 395 NFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSS 454
N L N +K++DFG++ L D+T ++T GT +M+PE +
Sbjct: 159 NVLLTENA---------EVKLVDFGVSAQL--DRTVGRRNTFIGTPYWMAPEVIACDENP 207
Query: 455 GGGNTYRITYKSDVWSLGCILYNMIYGRTP 484
TY +KSD+WSLG M G P
Sbjct: 208 DA--TY--DFKSDLWSLGITAIEMAEGAPP 233
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYV-LMEKGD 344
+A+K V+ + + I +LNE ++ + C +V+++ V + + LM +GD
Sbjct: 49 VAIKTVNEAASMRERI--EFLNEASVMKEFN-CHHVVRLLGVVSQGQPTLVIMELMTRGD 105
Query: 345 TDLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFV 399
L Y+R+L N P ++ +I E+ + ++A +H DL N +
Sbjct: 106 --LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 163
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGG 457
+ +KI DFG+ + + T ++ G L +MSPE+ G
Sbjct: 164 EDF---------TVKIGDFGMTRDIYE--TDYYRKGGKGLLPVRWMSPESL----KDGVF 208
Query: 458 NTYRITYKSDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVT 516
TY SDVWS G +L+ + PY + N ++L ++ KP
Sbjct: 209 TTY-----SDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRFVMEGGLLD-KPD-----N 255
Query: 517 IPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNPE 551
P L + M++C Q +PK RP+ ++ I E
Sbjct: 256 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 290
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYV-LMEKGD 344
+A+K V+ + + I +LNE ++ + C +V+++ V + + LM +GD
Sbjct: 45 VAIKTVNEAASMRERI--EFLNEASVMKEFN-CHHVVRLLGVVSQGQPTLVIMELMTRGD 101
Query: 345 TDLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFV 399
L Y+R+L N P ++ +I E+ + ++A +H DL N +
Sbjct: 102 --LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 159
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGG 457
+ +KI DFG+ + + T ++ G L +MSPE+ G
Sbjct: 160 EDF---------TVKIGDFGMTRDIYE--TDYYRKGGKGLLPVRWMSPESL----KDGVF 204
Query: 458 NTYRITYKSDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVT 516
TY SDVWS G +L+ + PY + N ++L ++ KP
Sbjct: 205 TTY-----SDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRFVMEGGLLD-KPD-----N 251
Query: 517 IPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNPE 551
P L + M++C Q +PK RP+ ++ I E
Sbjct: 252 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 33/173 (19%)
Query: 375 LLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCI---GNVLKIIDFGIACSLQDDKTSV 431
LLAV AAG+++ A FV L +C+ G V+KI DFG++ +D ++
Sbjct: 160 LLAVASQVAAGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMS---RDIYSTD 212
Query: 432 HKDTASGTL---NYMSPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYNMI-YGRTPYS 486
+ T+ +M PE+ YR T +SDVWS G +L+ + YG+ P+
Sbjct: 213 YYRVGGRTMLPIRWMPPESI----------LYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTV 539
+ NT A D I +L PP + M+ C Q++P+ R ++
Sbjct: 263 QLSNTEA--------IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSI 307
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 38/169 (22%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
IH DL N L NV+KI DFG+A + D V K A L +M+PE
Sbjct: 166 IHRDLAARNILLSEK---------NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 216
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQI 505
T +SDVWS G +L+ + G +PY + K
Sbjct: 217 TIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV-------------KIDE 254
Query: 506 EFKPQLANNVTI------PPTLLQSMKLCLQKDPKARPTVGNSVTQINN 548
EF +L + P + Q+M C +P RPT V + N
Sbjct: 255 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 303
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 46/263 (17%)
Query: 304 SYLNEVELLAKLQGCPYVIKMHDYVY------DTASKHLYVLMEKGDTDLSKYMRNLNKM 357
+ + EV + KL G P +++ DT +L E L ++++ +
Sbjct: 71 AIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESR 130
Query: 358 TTLPNTMIIIIMHWYEMLLAVKEIHAAG--IIHSDLKPANFLFVGNVLKIIDCIGNVLKI 415
L ++ I +Y+ AV+ +H IIH DLK N L +K+
Sbjct: 131 GPLSCDTVLKI--FYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ---------GTIKL 179
Query: 416 IDFGIACSL----------QDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
DFG A ++ Q + T + T Y +PE S+ + I K
Sbjct: 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSN------FPIGEK 233
Query: 466 SDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSM 525
D+W+LGCILY + + + P+ L I K I P T+ +L+++M
Sbjct: 234 QDIWALGCILYLLCFRQHPFED-----GAKLRIVNGKYSI---PPHDTQYTVFHSLIRAM 285
Query: 526 KLCLQKDPKARPTVGNSVTQINN 548
LQ +P+ R ++ V Q+
Sbjct: 286 ---LQVNPEERLSIAEVVHQLQE 305
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYV-LMEKGD 344
+A+K V+ + + I +LNE ++ + C +V+++ V + + LM +GD
Sbjct: 58 VAIKTVNEAASMRERI--EFLNEASVMKEFN-CHHVVRLLGVVSQGQPTLVIMELMTRGD 114
Query: 345 TDLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFV 399
L Y+R+L N P ++ +I E+ + ++A +H DL N +
Sbjct: 115 --LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 172
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGG 457
+ +KI DFG+ + + T ++ G L +MSPE+ G
Sbjct: 173 EDF---------TVKIGDFGMTRDIYE--TDYYRKGGKGLLPVRWMSPESL----KDGVF 217
Query: 458 NTYRITYKSDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVT 516
TY SDVWS G +L+ + PY + N ++L ++ KP
Sbjct: 218 TTY-----SDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRFVMEGGLLD-KPD-----N 264
Query: 517 IPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNPE 551
P L + M++C Q +PK RP+ ++ I E
Sbjct: 265 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 28/187 (14%)
Query: 296 ITDQSIADSYLNEVELLAKLQGCPYVIKMHD-YVY--DTASKHLYVLMEKGDTDLSKYMR 352
++D + L E+ LL P ++ + D +V+ + A LY++ E TDL++ +
Sbjct: 67 LSDSFLCKRVLREIRLLNHFHH-PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH 125
Query: 353 NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV 412
+ ++ P + + Y +LL + +H AG++H DL P N L N N
Sbjct: 126 D-QRIVISPQHIQYFM---YHILLGLHVLHEAGVVHRDLHPGNILLADN---------ND 172
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLG 472
+ I DF +A D H T Y +PE Q T D+WS G
Sbjct: 173 ITICDFNLAREDTADANKTHYVTHRW---YRAPELVMQFKG--------FTKLVDMWSAG 221
Query: 473 CILYNMI 479
C++ M
Sbjct: 222 CVMAEMF 228
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
EV +L ++Q P VI +H+ VY+ + + +L +L ++ +T T +
Sbjct: 64 EVSILKEIQ-HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL- 120
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG-NVLKIIDCIGNVLKIIDFGIACSLQD 426
++L V +H+ I H DLKP N + + NV K +KIIDFG+A +
Sbjct: 121 ----KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK------PRIKIIDFGLAHKI-- 168
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
D + K+ GT +++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 169 DFGNEFKNIF-GTPEFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF- 217
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ +T + LA + EF+ + +N + ++ L KDPK R T+ +S+
Sbjct: 218 -LGDTKQETLANVSAVNY-EFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSL 270
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
EV +L ++Q P VI +H+ VY+ + + +L +L ++ +T T +
Sbjct: 64 EVSILKEIQ-HPNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL- 120
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG-NVLKIIDCIGNVLKIIDFGIACSLQD 426
++L V +H+ I H DLKP N + + NV K +KIIDFG+A +
Sbjct: 121 ----KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK------PRIKIIDFGLAHKI-- 168
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
D + K+ GT +++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 169 DFGNEFKNIF-GTPEFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF- 217
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ +T + LA + EF+ + +N + ++ L KDPK R T+ +S+
Sbjct: 218 -LGDTKQETLANVSAVNY-EFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSL 270
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYV-LMEKGD 344
+A+K V+ + + I +LNE ++ + C +V+++ V + + LM +GD
Sbjct: 52 VAIKTVNEAASMRERI--EFLNEASVMKEFN-CHHVVRLLGVVSQGQPTLVIMELMTRGD 108
Query: 345 TDLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFV 399
L Y+R+L N P ++ +I E+ + ++A +H DL N +
Sbjct: 109 --LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 166
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGG 457
+ +KI DFG+ + + T ++ G L +MSPE+ G
Sbjct: 167 EDF---------TVKIGDFGMTRDIYE--TDYYRKGGKGLLPVRWMSPESL----KDGVF 211
Query: 458 NTYRITYKSDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVT 516
TY SDVWS G +L+ + PY + N ++L ++ KP
Sbjct: 212 TTY-----SDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRFVMEGGLLD-KPD-----N 258
Query: 517 IPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNPE 551
P L + M++C Q +PK RP+ ++ I E
Sbjct: 259 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 293
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 30/195 (15%)
Query: 293 LSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTA---SKHLYVLMEKGDTDLSK 349
+S Q+ L E+++L + + +I ++D + K +Y++ + +TDL K
Sbjct: 60 ISPFEHQTYCQRTLREIKILLRFRH-ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 118
Query: 350 YMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCI 409
L K L N I + Y++L +K IH+A ++H DLKP+N L
Sbjct: 119 ----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKPSNLLLNTTC------- 165
Query: 410 GNVLKIIDFGIA--CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSD 467
LKI DFG+A D T + + T Y +PE +S G T D
Sbjct: 166 --DLKICDFGLARVADPDHDHTGFLXEXVA-TRWYRAPEI--MLNSKG------YTKSID 214
Query: 468 VWSLGCILYNMIYGR 482
+WS+GCIL M+ R
Sbjct: 215 IWSVGCILAEMLSNR 229
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 113/255 (44%), Gaps = 39/255 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME-KGD 344
+A+KV L T+++ + + E +++ +L PY++++ + ++ L ++ME G
Sbjct: 366 VAIKV--LKQGTEKADTEEMMREAQIMHQLDN-PYIVRL---IGVCQAEALMLVMEMAGG 419
Query: 345 TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLK 404
L K++ + K +P + + ++H ++ + +K + +H +L N L V
Sbjct: 420 GPLHKFL--VGKREEIPVSNVAELLH--QVSMGMKYLEEKNFVHRNLAARNVLLVNR--- 472
Query: 405 IIDCIGNVLKIIDFGIACSL-QDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRIT 463
+ KI DFG++ +L DD + L + +PE N + +
Sbjct: 473 ------HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI---------NFRKFS 517
Query: 464 YKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLL 522
+SDVWS G ++ + YG+ PY + +++A ++E P+ PP L
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGKRMECPPE------CPPELY 569
Query: 523 QSMKLCLQKDPKARP 537
M C + RP
Sbjct: 570 ALMSDCWIYKWEDRP 584
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 30/195 (15%)
Query: 293 LSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTA---SKHLYVLMEKGDTDLSK 349
+S Q+ L E+++L + + +I ++D + K +Y++ + +TDL K
Sbjct: 61 ISPFEHQTYCQRTLREIKILLRFRH-ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 119
Query: 350 YMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCI 409
L K L N I + Y++L +K IH+A ++H DLKP+N L
Sbjct: 120 ----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKPSNLLLNTTC------- 166
Query: 410 GNVLKIIDFGIA--CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSD 467
LKI DFG+A D T + + T Y +PE +S G T D
Sbjct: 167 --DLKICDFGLARVADPDHDHTGFLXEXVA-TRWYRAPEI--MLNSKG------YTKSID 215
Query: 468 VWSLGCILYNMIYGR 482
+WS+GCIL M+ R
Sbjct: 216 IWSVGCILAEMLSNR 230
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 48/269 (17%)
Query: 295 DITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT-DLSKYMR- 352
D T++ ++D ++E+E++ + +I + T LYV++E +L +Y+R
Sbjct: 67 DATEKDLSD-LVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRA 123
Query: 353 ----------NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++N++ T ++ Y++ ++ + + IH DL N L N
Sbjct: 124 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN- 182
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTY 460
NV+KI DFG+A + + +K T +G L +M+PEA
Sbjct: 183 --------NVMKIADFGLARDINN--IDYYKKTTNGRLPVKWMAPEALFDRV-------- 224
Query: 461 RITYKSDVWSLGCILYNMI-YGRTPYSHIP-NTWAKMLAIARHKDQIEFKPQLANNVTIP 518
T++SDVWS G +++ + G +PY IP K+L D KP N
Sbjct: 225 -YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD----KPANCTN---- 275
Query: 519 PTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
L M+ C P RPT V ++
Sbjct: 276 -ELYMMMRDCWHAVPSQRPTFKQLVEDLD 303
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 84/194 (43%), Gaps = 23/194 (11%)
Query: 293 LSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLS---K 349
L I I+ S E+ LL +L+ P VI + A + +++L + + DL K
Sbjct: 53 LKQIEGTGISMSACREIALLRELKH-PNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIK 111
Query: 350 YMRNLN---KMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
+ R K LP M+ ++ Y++L + +HA ++H DLKPAN L +G +
Sbjct: 112 FHRASKANKKPVQLPRGMVKSLL--YQILDGIHYLHANWVLHRDLKPANILVMGEGPE-- 167
Query: 407 DCIGNVLKIIDFGIACSLQDD-KTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
G V KI D G A K D T Y +PE G Y T
Sbjct: 168 --RGRV-KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL------LGARHY--TKA 216
Query: 466 SDVWSLGCILYNMI 479
D+W++GCI ++
Sbjct: 217 IDIWAIGCIFAELL 230
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
EV +L ++Q P VI +H+ VY+ + + +L +L ++ +T T +
Sbjct: 64 EVSILKEIQH-PNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL- 120
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG-NVLKIIDCIGNVLKIIDFGIACSLQD 426
++L V +H+ I H DLKP N + + NV K +KIIDFG+A +
Sbjct: 121 ----KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK------PRIKIIDFGLAHKI-- 168
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
D + K+ GT +++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 169 DFGNEFKNIF-GTPAFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF- 217
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ +T + LA + EF+ + +N + ++ L KDPK R T+ +S+
Sbjct: 218 -LGDTKQETLANVSAVN-YEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSL 270
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 28/187 (14%)
Query: 296 ITDQSIADSYLNEVELLAKLQGCPYVIKMHD---YVYDTASKHLYVLMEKGDTDLSKYMR 352
++D + L E+ LL P ++ + D + + A LY++ E TDL++ +
Sbjct: 67 LSDSFLCKRVLREIRLLNHFHH-PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH 125
Query: 353 NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV 412
+ ++ P + + Y +LL + +H AG++H DL P N L N N
Sbjct: 126 D-QRIVISPQHIQYFM---YHILLGLHVLHEAGVVHRDLHPGNILLADN---------ND 172
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLG 472
+ I DF +A D H T Y +PE Q T D+WS G
Sbjct: 173 ITICDFNLAREDTADANKTHYVTHRW---YRAPELVMQFKG--------FTKLVDMWSAG 221
Query: 473 CILYNMI 479
C++ M
Sbjct: 222 CVMAEMF 228
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYV-LMEKGD 344
+A+K V+ + + I +LNE ++ + C +V+++ V + + LM +GD
Sbjct: 58 VAIKTVNEAASMRERI--EFLNEASVMKEFN-CHHVVRLLGVVSQGQPTLVIMELMTRGD 114
Query: 345 TDLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFV 399
L Y+R+L N P ++ +I E+ + ++A +H DL N +
Sbjct: 115 --LKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 172
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGG 457
+ +KI DFG+ + + T ++ G L +MSPE+ G
Sbjct: 173 EDF---------TVKIGDFGMTRDIYE--TDYYRKGGKGLLPVRWMSPESL----KDGVF 217
Query: 458 NTYRITYKSDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVT 516
TY SDVWS G +L+ + PY + N ++L ++ KP
Sbjct: 218 TTY-----SDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRFVMEGGLLD-KPD-----N 264
Query: 517 IPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNPE 551
P L + M++C Q +PK RP+ ++ I E
Sbjct: 265 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 34/181 (18%)
Query: 377 AVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV----LKIIDFGIACSLQDDKTSVH 432
++ IHA G H DLKP N L ++ +G++ + + A +LQD
Sbjct: 146 GLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ-- 203
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTW 492
T++Y +PE S I ++DVWSLGC+LY M++G PY
Sbjct: 204 ----RCTISYRAPELFSVQSHC------VIDERTDVWSLGCVLYAMMFGEGPYD------ 247
Query: 493 AKMLAIARHKDQIEFKPQLANNVTIPPT------LLQSMKLCLQKDPKARPTVGNSVTQI 546
+ + D + Q N ++IP + L Q + + DP RP + ++Q+
Sbjct: 248 ----MVFQKGDSVALAVQ--NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQL 301
Query: 547 N 547
Sbjct: 302 E 302
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 48/269 (17%)
Query: 295 DITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT-DLSKYMR- 352
D T++ ++D ++E+E++ + +I + T LYV++E +L +Y+R
Sbjct: 78 DATEKDLSD-LVSEMEMMKMIGKHKNIITLLGAC--TQDGPLYVIVEYASKGNLREYLRA 134
Query: 353 ----------NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++N++ T ++ Y++ ++ + + IH DL N L N
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN- 193
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTY 460
NV+KI DFG+A + + +K T +G L +M+PEA
Sbjct: 194 --------NVMKIADFGLARDINN--IDYYKKTTNGRLPVKWMAPEALFDRV-------- 235
Query: 461 RITYKSDVWSLGCILYNMI-YGRTPYSHIP-NTWAKMLAIARHKDQIEFKPQLANNVTIP 518
T++SDVWS G +++ + G +PY IP K+L D KP N
Sbjct: 236 -YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD----KPANCTN---- 286
Query: 519 PTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
L M+ C P RPT V ++
Sbjct: 287 -ELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYV-LMEKGD 344
+A+K V+ + + I +LNE ++ + C +V+++ V + + LM +GD
Sbjct: 48 VAIKTVNEAASMRERI--EFLNEASVMKEFN-CHHVVRLLGVVSQGQPTLVIMELMTRGD 104
Query: 345 TDLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFV 399
L Y+R+L N P ++ +I E+ + ++A +H DL N +
Sbjct: 105 --LKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 162
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGG 457
+ +KI DFG+ + + T ++ G L +MSPE+ G
Sbjct: 163 EDF---------TVKIGDFGMTRDIYE--TDYYRKGGKGLLPVRWMSPESL----KDGVF 207
Query: 458 NTYRITYKSDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVT 516
TY SDVWS G +L+ + PY + N ++L ++ KP
Sbjct: 208 TTY-----SDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRFVMEGGLLD-KPD-----N 254
Query: 517 IPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNPE 551
P L + M++C Q +PK RP+ ++ I E
Sbjct: 255 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 289
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 33/173 (19%)
Query: 375 LLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCI---GNVLKIIDFGIACSLQDDKTSV 431
LLAV AAG+++ A FV L +C+ G V+KI DFG++ +D ++
Sbjct: 131 LLAVASQVAAGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMS---RDIYSTD 183
Query: 432 HKDTASGTL---NYMSPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYNMI-YGRTPYS 486
+ T+ +M PE+ YR T +SDVWS G +L+ + YG+ P+
Sbjct: 184 YYRVGGRTMLPIRWMPPESI----------LYRKFTTESDVWSFGVVLWEIFTYGKQPWY 233
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTV 539
+ NT A D I +L PP + M+ C Q++P+ R ++
Sbjct: 234 QLSNTEA--------IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSI 278
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 117/276 (42%), Gaps = 58/276 (21%)
Query: 285 PLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---ME 341
P+A+K + + T++ D +L+E ++ + P +I++ V T + ++ ME
Sbjct: 79 PVAIKALK-AGYTERQRRD-FLSEASIMGQFD-HPNIIRLEGVV--TRGRLAMIVTEYME 133
Query: 342 KGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAV----KEIHAAGIIHSDLKPANFL 397
G D ++R + T IM ML V + + G +H DL N L
Sbjct: 134 NGSLD--TFLRTHDGQFT--------IMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVL 183
Query: 398 FVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGT-LNYMSPEA-AGQTSSSG 455
N+ V K+ DFG++ L+DD + + T + + +PEA A +T SS
Sbjct: 184 VDSNL---------VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSA 234
Query: 456 GGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKD---QIEFKPQL 511
SDVWS G +++ ++ YG PY ++ N +D +E +L
Sbjct: 235 ----------SDVWSFGVVMWEVLAYGERPYWNMTN-----------RDVISSVEEGYRL 273
Query: 512 ANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
+ P L Q M C KD RP V+ ++
Sbjct: 274 PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYV-LMEKGD 344
+A+K V+ + + I +LNE ++ + C +V+++ V + + LM +GD
Sbjct: 51 VAIKTVNEAASMRERI--EFLNEASVMKEFN-CHHVVRLLGVVSQGQPTLVIMELMTRGD 107
Query: 345 TDLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFV 399
L Y+R+L N P ++ +I E+ + ++A +H DL N +
Sbjct: 108 --LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 165
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGG 457
+ +KI DFG+ + + T ++ G L +MSPE+ G
Sbjct: 166 EDF---------TVKIGDFGMTRDIYE--TDYYRKGGKGLLPVRWMSPESL----KDGVF 210
Query: 458 NTYRITYKSDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVT 516
TY SDVWS G +L+ + PY + N ++L ++ KP
Sbjct: 211 TTY-----SDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRFVMEGGLLD-KPD-----N 257
Query: 517 IPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNPE 551
P L + M++C Q +PK RP+ ++ I E
Sbjct: 258 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYV-LMEKGD 344
+A+K V+ + + I +LNE ++ + C +V+++ V + + LM +GD
Sbjct: 51 VAIKTVNEAASMRERI--EFLNEASVMKEFN-CHHVVRLLGVVSQGQPTLVIMELMTRGD 107
Query: 345 TDLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFV 399
L Y+R+L N P ++ +I E+ + ++A +H DL N +
Sbjct: 108 --LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 165
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGG 457
+ +KI DFG+ + + T ++ G L +MSPE+ G
Sbjct: 166 EDF---------TVKIGDFGMTRDIYE--TDYYRKGGKGLLPVRWMSPESL----KDGVF 210
Query: 458 NTYRITYKSDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVT 516
TY SDVWS G +L+ + PY + N ++L ++ KP
Sbjct: 211 TTY-----SDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRFVMEGGLLD-KPD-----N 257
Query: 517 IPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNPE 551
P L + M++C Q +PK RP+ ++ I E
Sbjct: 258 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 48/269 (17%)
Query: 295 DITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT-DLSKYMR- 352
D T++ ++D ++E+E++ + +I + T LYV++E +L +Y+R
Sbjct: 78 DATEKDLSD-LVSEMEMMKMIGKHKNIIHLLGAC--TQDGPLYVIVEYASKGNLREYLRA 134
Query: 353 ----------NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++N++ T ++ Y++ ++ + + IH DL N L N
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN- 193
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTY 460
NV+KI DFG+A + + +K T +G L +M+PEA
Sbjct: 194 --------NVMKIADFGLARDINN--IDYYKKTTNGRLPVKWMAPEALFDRV-------- 235
Query: 461 RITYKSDVWSLGCILYNMI-YGRTPYSHIP-NTWAKMLAIARHKDQIEFKPQLANNVTIP 518
T++SDVWS G +++ + G +PY IP K+L D KP N
Sbjct: 236 -YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD----KPANCTN---- 286
Query: 519 PTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
L M+ C P RPT V ++
Sbjct: 287 -ELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 33/173 (19%)
Query: 375 LLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCI---GNVLKIIDFGIACSLQDDKTSV 431
LLAV AAG+++ A FV L +C+ G V+KI DFG++ +D ++
Sbjct: 137 LLAVASQVAAGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMS---RDIYSTD 189
Query: 432 HKDTASGTL---NYMSPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYNMI-YGRTPYS 486
+ T+ +M PE+ YR T +SDVWS G +L+ + YG+ P+
Sbjct: 190 YYRVGGRTMLPIRWMPPESI----------LYRKFTTESDVWSFGVVLWEIFTYGKQPWY 239
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTV 539
+ NT A D I +L PP + M+ C Q++P+ R ++
Sbjct: 240 QLSNTEA--------IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSI 284
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 115/277 (41%), Gaps = 51/277 (18%)
Query: 285 PLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGD 344
P+A+K + + Q +L E ++ + P +I + V T SK + ++ E
Sbjct: 52 PVAIKTLKVGYTEKQR--RDFLGEASIMGQFDH-PNIIHLEGVV--TKSKPVMIVTE--- 103
Query: 345 TDLSKYMRNLNKMTTLPN-----TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFV 399
YM N + T L T+I ++ + +K + G +H DL N L
Sbjct: 104 -----YMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILIN 158
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGG 457
N+ V K+ DFG++ L+DD + + T G + + +PEA
Sbjct: 159 SNL---------VCKVSDFGLSRVLEDDPEAAYT-TRGGKIPIRWTAPEAIA-------- 200
Query: 458 NTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVT 516
+ T SDVWS G +++ ++ YG PY + N +E +L + +
Sbjct: 201 -FRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQ--------DVIKAVEEGYRLPSPMD 251
Query: 517 IPPTLLQSMKLCLQKDPKARP---TVGNSVTQINNNP 550
P L Q M C QK+ +RP + N + ++ NP
Sbjct: 252 CPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIRNP 288
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 48/269 (17%)
Query: 295 DITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT-DLSKYMR- 352
D T++ ++D ++E+E++ + +I + T LYV++E +L +Y+R
Sbjct: 70 DATEKDLSD-LVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRA 126
Query: 353 ----------NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++N++ T ++ Y++ ++ + + IH DL N L N
Sbjct: 127 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN- 185
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTY 460
NV+KI DFG+A + + +K T +G L +M+PEA
Sbjct: 186 --------NVMKIADFGLARDINN--IDYYKKTTNGRLPVKWMAPEALFDRV-------- 227
Query: 461 RITYKSDVWSLGCILYNMI-YGRTPYSHIP-NTWAKMLAIARHKDQIEFKPQLANNVTIP 518
T++SDVWS G +++ + G +PY IP K+L D KP N
Sbjct: 228 -YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD----KPANCTN---- 278
Query: 519 PTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
L M+ C P RPT V ++
Sbjct: 279 -ELYMMMRDCWHAVPSQRPTFKQLVEDLD 306
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 116/275 (42%), Gaps = 42/275 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYV-LMEKGD 344
+A+K V+ + + I +LNE ++ + C +V+++ V + + LM +GD
Sbjct: 52 VAIKTVNEAASMRERI--EFLNEASVMKEFN-CHHVVRLLGVVSQGQPTLVIMELMTRGD 108
Query: 345 TDLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFV 399
L Y+R+L N P ++ +I E+ + ++A +H DL N +
Sbjct: 109 --LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 166
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGG 457
+ +KI DFG+ + + T + G L +MSPE+ G
Sbjct: 167 EDF---------TVKIGDFGMTRDIXE--TDXXRKGGKGLLPVRWMSPESL----KDGVF 211
Query: 458 NTYRITYKSDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVT 516
TY SDVWS G +L+ + PY + N ++L ++ KP
Sbjct: 212 TTY-----SDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRFVMEGGLLD-KPD-----N 258
Query: 517 IPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNPE 551
P L + M++C Q +PK RP+ ++ I E
Sbjct: 259 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 293
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYV-LMEKGD 344
+A+K V+ + + I +LNE ++ + C +V+++ V + + LM +GD
Sbjct: 45 VAIKTVNEAASMRERI--EFLNEASVMKEFN-CHHVVRLLGVVSQGQPTLVIMELMTRGD 101
Query: 345 TDLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFV 399
L Y+R+L N P ++ +I E+ + ++A +H DL N
Sbjct: 102 --LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVA 159
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGG 457
+ +KI DFG+ + + T ++ G L +MSPE+ G
Sbjct: 160 EDF---------TVKIGDFGMTRDIYE--TDYYRKGGKGLLPVRWMSPESL----KDGVF 204
Query: 458 NTYRITYKSDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVT 516
TY SDVWS G +L+ + PY + N ++L ++ KP
Sbjct: 205 TTY-----SDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRFVMEGGLLD-KPD-----N 251
Query: 517 IPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNPE 551
P LL+ M++C Q +PK RP+ ++ I E
Sbjct: 252 CPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 26/151 (17%)
Query: 334 KHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKP 393
K +Y++ + +TDL K L K L N I + Y++L +K IH+A ++H DLKP
Sbjct: 101 KDVYIVQDLMETDLYK----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKP 154
Query: 394 ANFLFVGNVLKIIDCIGNVLKIIDFGIA--CSLQDDKTSVHKDTASGTLNYMSPEAAGQT 451
+N L + LKI DFG+A D T + + T Y +PE
Sbjct: 155 SNLLLNTT---------SDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEI--ML 202
Query: 452 SSSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
+S G T D+WS+GCIL M+ R
Sbjct: 203 NSKG------YTKSIDIWSVGCILAEMLSNR 227
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 48/269 (17%)
Query: 295 DITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT-DLSKYMR- 352
D T++ ++D ++E+E++ + +I + T LYV++E +L +Y+R
Sbjct: 65 DATEKDLSD-LVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRA 121
Query: 353 ----------NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++N++ T ++ Y++ ++ + + IH DL N L N
Sbjct: 122 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTEN- 180
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTY 460
NV+KI DFG+A + + +K T +G L +M+PEA
Sbjct: 181 --------NVMKIADFGLARDINN--IDYYKKTTNGRLPVKWMAPEALFDRV-------- 222
Query: 461 RITYKSDVWSLGCILYNMI-YGRTPYSHIP-NTWAKMLAIARHKDQIEFKPQLANNVTIP 518
T++SDVWS G +++ + G +PY IP K+L D KP N
Sbjct: 223 -YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD----KPANCTN---- 273
Query: 519 PTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
L M+ C P RPT V ++
Sbjct: 274 -ELYMMMRDCWHAVPSQRPTFKQLVEDLD 301
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 28/194 (14%)
Query: 293 LSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTA---SKHLYVLMEKGDTDLSK 349
+S Q+ L E+++L + + +I ++D + K +Y++ + +TDL K
Sbjct: 60 ISPFEHQTYCQRTLREIKILLRFRH-ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 118
Query: 350 YMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCI 409
L K L N I + Y++L +K IH+A ++H DLKP+N L
Sbjct: 119 ----LLKCQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKPSNLLLNTTC------- 165
Query: 410 GNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTSSSGGGNTYRITYKSDV 468
LKI DFG+A D T T Y +PE +S G T D+
Sbjct: 166 --DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI--MLNSKG------YTKSIDI 215
Query: 469 WSLGCILYNMIYGR 482
WS+GCIL M+ R
Sbjct: 216 WSVGCILAEMLSNR 229
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYV-LMEKGD 344
+A+K V+ + + I +LNE ++ + C +V+++ V + + LM +GD
Sbjct: 80 VAIKTVNEAASMRERI--EFLNEASVMKEFN-CHHVVRLLGVVSQGQPTLVIMELMTRGD 136
Query: 345 TDLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFV 399
L Y+R+L N P ++ +I E+ + ++A +H DL N +
Sbjct: 137 --LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 194
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGG 457
+ +KI DFG+ + + T ++ G L +MSPE+ G
Sbjct: 195 EDF---------TVKIGDFGMTRDIYE--TDYYRKGGKGLLPVRWMSPESL----KDGVF 239
Query: 458 NTYRITYKSDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVT 516
TY SDVWS G +L+ + PY + N ++L ++ KP
Sbjct: 240 TTY-----SDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRFVMEGGLLD-KPD-----N 286
Query: 517 IPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNPE 551
P L + M++C Q +PK RP+ ++ I E
Sbjct: 287 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 321
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 334 KHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKP 393
K +Y++ + +TDL K L K L N I + Y++L +K IH+A ++H DLKP
Sbjct: 103 KDVYIVQDLMETDLYK----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKP 156
Query: 394 ANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTS 452
+N L LKI DFG+A D T T Y +PE +
Sbjct: 157 SNLLLNTTC---------DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI--MLN 205
Query: 453 SSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
S G T D+WS+GCIL M+ R
Sbjct: 206 SKG------YTKSIDIWSVGCILAEMLSNR 229
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+DF +A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDFYLARHTDDEMTGY 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
++L +V H GI+H DLKP N L G +K+ DFG+A +Q D+ +
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASK------SKGAAVKLADFGLAIEVQGDQQAWF 164
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+GT Y+SPE + D+W+ G ILY ++ G P+
Sbjct: 165 --GFAGTPGYLSPEVLRKDPYGK---------PVDMWACGVILYILLVGYPPF 206
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 334 KHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKP 393
K +Y++ + +TDL K L K L N I + Y++L +K IH+A ++H DLKP
Sbjct: 99 KDVYIVQDLMETDLYK----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKP 152
Query: 394 ANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTS 452
+N L LKI DFG+A D T T Y +PE +
Sbjct: 153 SNLLLNTTC---------DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI--MLN 201
Query: 453 SSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
S G T D+WS+GCIL M+ R
Sbjct: 202 SKG------YTKSIDIWSVGCILAEMLSNR 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 28/194 (14%)
Query: 293 LSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTA---SKHLYVLMEKGDTDLSK 349
+S Q+ L E+++L + + +I ++D + K +Y++ + +TDL K
Sbjct: 61 ISPFEHQTYCQRTLREIKILLRFRH-ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 119
Query: 350 YMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCI 409
L K L N I + Y++L +K IH+A ++H DLKP+N L
Sbjct: 120 ----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKPSNLLLNTTC------- 166
Query: 410 GNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTSSSGGGNTYRITYKSDV 468
LKI DFG+A D T T Y +PE +S G T D+
Sbjct: 167 --DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI--MLNSKG------YTKSIDI 216
Query: 469 WSLGCILYNMIYGR 482
WS+GCIL M+ R
Sbjct: 217 WSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 28/194 (14%)
Query: 293 LSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTA---SKHLYVLMEKGDTDLSK 349
+S Q+ L E+++L + + +I ++D + K +Y++ + +TDL K
Sbjct: 62 ISPFEHQTYCQRTLREIKILLRFRH-ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 120
Query: 350 YMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCI 409
L K L N I + Y++L +K IH+A ++H DLKP+N L
Sbjct: 121 ----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKPSNLLLNTTC------- 167
Query: 410 GNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTSSSGGGNTYRITYKSDV 468
LKI DFG+A D T T Y +PE +S G T D+
Sbjct: 168 --DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI--MLNSKG------YTKSIDI 217
Query: 469 WSLGCILYNMIYGR 482
WS+GCIL M+ R
Sbjct: 218 WSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 28/194 (14%)
Query: 293 LSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTA---SKHLYVLMEKGDTDLSK 349
+S Q+ L E+++L + + +I ++D + K +Y++ + +TDL K
Sbjct: 53 ISPFEHQTYCQRTLREIKILLRFRH-ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 111
Query: 350 YMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCI 409
L K L N I + Y++L +K IH+A ++H DLKP+N L
Sbjct: 112 ----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKPSNLLLNTTC------- 158
Query: 410 GNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTSSSGGGNTYRITYKSDV 468
LKI DFG+A D T T Y +PE +S G T D+
Sbjct: 159 --DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI--MLNSKG------YTKSIDI 208
Query: 469 WSLGCILYNMIYGR 482
WS+GCIL M+ R
Sbjct: 209 WSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 28/194 (14%)
Query: 293 LSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTA---SKHLYVLMEKGDTDLSK 349
+S Q+ L E+++L + + +I ++D + K +Y++ + +TDL K
Sbjct: 60 ISPFEHQTYCQRTLREIKILLRFRH-ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 118
Query: 350 YMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCI 409
L K L N I + Y++L +K IH+A ++H DLKP+N L
Sbjct: 119 ----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKPSNLLLNTTC------- 165
Query: 410 GNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTSSSGGGNTYRITYKSDV 468
LKI DFG+A D T T Y +PE +S G T D+
Sbjct: 166 --DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI--MLNSKG------YTKSIDI 215
Query: 469 WSLGCILYNMIYGR 482
WS+GCIL M+ R
Sbjct: 216 WSVGCILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 28/194 (14%)
Query: 293 LSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTA---SKHLYVLMEKGDTDLSK 349
+S Q+ L E+++L + + +I ++D + K +Y++ + +TDL K
Sbjct: 58 ISPFEHQTYCQRTLREIKILLRFRH-ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 116
Query: 350 YMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCI 409
L K L N I + Y++L +K IH+A ++H DLKP+N L
Sbjct: 117 ----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKPSNLLLNTTC------- 163
Query: 410 GNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTSSSGGGNTYRITYKSDV 468
LKI DFG+A D T T Y +PE +S G T D+
Sbjct: 164 --DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI--MLNSKG------YTKSIDI 213
Query: 469 WSLGCILYNMIYGR 482
WS+GCIL M+ R
Sbjct: 214 WSVGCILAEMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 26/151 (17%)
Query: 334 KHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKP 393
K +Y++ + +TDL K L K L N I + Y++L +K IH+A ++H DLKP
Sbjct: 107 KDVYIVQDLMETDLYK----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKP 160
Query: 394 ANFLFVGNVLKIIDCIGNVLKIIDFGIA--CSLQDDKTSVHKDTASGTLNYMSPEAAGQT 451
+N L LKI DFG+A D T + + T Y +PE
Sbjct: 161 SNLLLNTTC---------DLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEI--ML 208
Query: 452 SSSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
+S G T D+WS+GCIL M+ R
Sbjct: 209 NSKG------YTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 26/151 (17%)
Query: 334 KHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKP 393
K +Y++ + +TDL K L K L N I + Y++L +K IH+A ++H DLKP
Sbjct: 99 KDVYIVQDLMETDLYK----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKP 152
Query: 394 ANFLFVGNVLKIIDCIGNVLKIIDFGIA--CSLQDDKTSVHKDTASGTLNYMSPEAAGQT 451
+N L LKI DFG+A D T + + T Y +PE
Sbjct: 153 SNLLLNTTC---------DLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEI--ML 200
Query: 452 SSSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
+S G T D+WS+GCIL M+ R
Sbjct: 201 NSKG------YTKSIDIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 334 KHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKP 393
K +Y++ + +TDL K L K L N I + Y++L +K IH+A ++H DLKP
Sbjct: 97 KDVYIVQDLMETDLYK----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKP 150
Query: 394 ANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTS 452
+N L LKI DFG+A D T T Y +PE +
Sbjct: 151 SNLLLNTTC---------DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI--MLN 199
Query: 453 SSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
S G T D+WS+GCIL M+ R
Sbjct: 200 SKG------YTKSIDIWSVGCILAEMLSNR 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 30/195 (15%)
Query: 293 LSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTA---SKHLYVLMEKGDTDLSK 349
+S Q+ L E+++L + + +I ++D + K +Y++ + +TDL K
Sbjct: 76 ISPFEHQTYCQRTLREIKILLRFRH-ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 134
Query: 350 YMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCI 409
L K L N I + Y++L +K IH+A ++H DLKP+N L
Sbjct: 135 ----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKPSNLLLNTTC------- 181
Query: 410 GNVLKIIDFGIA--CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSD 467
LKI DFG+A D T + + T Y +PE +S G T D
Sbjct: 182 --DLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEI--MLNSKG------YTKSID 230
Query: 468 VWSLGCILYNMIYGR 482
+WS+GCIL M+ R
Sbjct: 231 IWSVGCILAEMLSNR 245
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 334 KHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKP 393
K +Y++ + +TDL K L K L N I + Y++L +K IH+A ++H DLKP
Sbjct: 101 KDVYIVQDLMETDLYK----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKP 154
Query: 394 ANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTS 452
+N L LKI DFG+A D T T Y +PE +
Sbjct: 155 SNLLLNTTC---------DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI--MLN 203
Query: 453 SSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
S G T D+WS+GCIL M+ R
Sbjct: 204 SKG------YTKSIDIWSVGCILAEMLSNR 227
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+D G+A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDAGLARHTDDEMTGY 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 334 KHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKP 393
K +Y++ + +TDL K L K L N I + Y++L +K IH+A ++H DLKP
Sbjct: 97 KDVYIVQDLMETDLYK----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKP 150
Query: 394 ANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTS 452
+N L LKI DFG+A D T T Y +PE +
Sbjct: 151 SNLLLNTTC---------DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI--MLN 199
Query: 453 SSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
S G T D+WS+GCIL M+ R
Sbjct: 200 SKG------YTKSIDIWSVGCILAEMLSNR 223
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 27/179 (15%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHL-YVLMEKGDTDLSKYMRNLNKMTTLPNTMII 366
E + KLQ P ++++HD + + + +L + L+ G+ R + +
Sbjct: 78 EARICRKLQH-PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI-- 134
Query: 367 IIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQD 426
++L ++ H+ GI+H +LKP N L G +K+ DFG+A + D
Sbjct: 135 -----QQILESIAYCHSNGIVHRNLKPENLLLASKAK------GAAVKLADFGLAIEVND 183
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ +GT Y+SPE + S D+W+ G ILY ++ G P+
Sbjct: 184 SEAW---HGFAGTPGYLSPEVLKKDPYSK---------PVDIWACGVILYILLVGYPPF 230
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 334 KHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKP 393
K +Y++ + +TDL K L K L N I + Y++L +K IH+A ++H DLKP
Sbjct: 103 KDVYIVQDLMETDLYK----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKP 156
Query: 394 ANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTS 452
+N L LKI DFG+A D T T Y +PE +
Sbjct: 157 SNLLLNTT---------XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI--MLN 205
Query: 453 SSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
S G T D+WS+GCIL M+ R
Sbjct: 206 SKG------YTKSIDIWSVGCILAEMLSNR 229
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
A+KV ++I+ D + E E+L KL ++K+ +T ++H ++ME
Sbjct: 37 FAIKV--FNNISFLRPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTRHKVLIMEFCPC 93
Query: 346 D-LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLK 404
L + + LP + +I++ +++ + + GI+H ++KP GN+++
Sbjct: 94 GSLYTVLEEPSNAYGLPESEFLIVLR--DVVGGMNHLRENGIVHRNIKP------GNIMR 145
Query: 405 IIDCIG-NVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRIT 463
+I G +V K+ DFG A L+DD+ V + GT Y+ P+ + + + +
Sbjct: 146 VIGEDGQSVYKLTDFGAARELEDDEQFV---SLYGTEEYLHPDMY-ERAVLRKDHQKKYG 201
Query: 464 YKSDVWSLGCILYNMIYGRTPY 485
D+WS+G Y+ G P+
Sbjct: 202 ATVDLWSIGVTFYHAATGSLPF 223
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
++L +V H GI+H DLKP N L G +K+ DFG+A +Q D+ +
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASK------SKGAAVKLADFGLAIEVQGDQQAWF 164
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+GT Y+SPE + D+W+ G ILY ++ G P+
Sbjct: 165 --GFAGTPGYLSPEVLRKDPYGK---------PVDMWACGVILYILLVGYPPF 206
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 334 KHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKP 393
K +Y++ + +TDL K L K L N I + Y++L +K IH+A ++H DLKP
Sbjct: 99 KDVYIVQDLMETDLYK----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKP 152
Query: 394 ANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTS 452
+N L LKI DFG+A D T T Y +PE +
Sbjct: 153 SNLLLNTT---------XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI--MLN 201
Query: 453 SSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
S G T D+WS+GCIL M+ R
Sbjct: 202 SKG------YTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 334 KHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKP 393
K +Y++ + +TDL K L K L N I + Y++L +K IH+A ++H DLKP
Sbjct: 99 KDVYIVQDLMETDLYK----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKP 152
Query: 394 ANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTS 452
+N L LKI DFG+A D T T Y +PE +
Sbjct: 153 SNLLLNTT---------XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI--MLN 201
Query: 453 SSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
S G T D+WS+GCIL M+ R
Sbjct: 202 SKG------YTKSIDIWSVGCILAEMLSNR 225
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+D G+A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDRGLARHTDDEMTGY 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 26/151 (17%)
Query: 334 KHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKP 393
K +Y++ + +TDL K L K L N I + Y++L +K IH+A ++H DLKP
Sbjct: 103 KDVYIVQDLMETDLYK----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKP 156
Query: 394 ANFLFVGNVLKIIDCIGNVLKIIDFGIA--CSLQDDKTSVHKDTASGTLNYMSPEAAGQT 451
+N L LKI DFG+A D T + + T Y +PE
Sbjct: 157 SNLLLNTT---------XDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEI--ML 204
Query: 452 SSSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
+S G T D+WS+GCIL M+ R
Sbjct: 205 NSKG------YTKSIDIWSVGCILAEMLSNR 229
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 334 KHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKP 393
K +Y++ + +TDL K L K L N I + Y++L +K IH+A ++H DLKP
Sbjct: 99 KDVYIVQDLMETDLYK----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKP 152
Query: 394 ANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTS 452
+N L LKI DFG+A D T T Y +PE +
Sbjct: 153 SNLLLNTT---------XDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEI--MLN 201
Query: 453 SSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
S G T D+WS+GCIL M+ R
Sbjct: 202 SKG------YTKSIDIWSVGCILAEMLSNR 225
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 113/269 (42%), Gaps = 48/269 (17%)
Query: 295 DITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT-DLSKYMR- 352
D T++ ++D ++E+E++ + +I + T LYV++E +L +Y+R
Sbjct: 78 DATEKDLSD-LVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRA 134
Query: 353 ----------NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++N++ T ++ Y++ ++ + + IH DL N L N
Sbjct: 135 RRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN- 193
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTY 460
NV+KI DFG+A + + K T +G L +M+PEA
Sbjct: 194 --------NVMKIADFGLARDINN--IDXXKKTTNGRLPVKWMAPEALFDRV-------- 235
Query: 461 RITYKSDVWSLGCILYNMI-YGRTPYSHIP-NTWAKMLAIARHKDQIEFKPQLANNVTIP 518
T++SDVWS G +++ + G +PY IP K+L D KP N
Sbjct: 236 -YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD----KPANCTN---- 286
Query: 519 PTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
L M+ C P RPT V ++
Sbjct: 287 -ELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 114/269 (42%), Gaps = 48/269 (17%)
Query: 295 DITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT-DLSKYMR- 352
D T++ ++D ++E+E++ + +I + T LYV++E +L +Y+R
Sbjct: 78 DATEKDLSD-LVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRA 134
Query: 353 ----------NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++N++ T ++ Y++ ++ + + IH DL N L N
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN- 193
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTY 460
NV++I DFG+A + + +K T +G L +M+PEA
Sbjct: 194 --------NVMRIADFGLARDINN--IDYYKKTTNGRLPVKWMAPEALFDRV-------- 235
Query: 461 RITYKSDVWSLGCILYNMI-YGRTPYSHIP-NTWAKMLAIARHKDQIEFKPQLANNVTIP 518
T++SDVWS G +++ + G +PY IP K+L D KP N
Sbjct: 236 -YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD----KPANCTN---- 286
Query: 519 PTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
L M+ C P RPT V ++
Sbjct: 287 -ELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 92/201 (45%), Gaps = 44/201 (21%)
Query: 302 ADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLP 361
A E+ +L +L G ++ + + + + +Y++ + +TDL +R N + +
Sbjct: 52 AQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIR-ANILEPVH 110
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
++ Y+++ +K +H+ G++H D+KP+N L +C +K+ DFG++
Sbjct: 111 KQYVV-----YQLIKVIKYLHSGGLLHRDMKPSNILLNA------EC---HVKVADFGLS 156
Query: 422 CSLQDDK-------TSVHKDTAS------------GTLNYMSPEA-AGQTSSSGGGNTYR 461
S + + S++++T + T Y +PE G T + G
Sbjct: 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKG----- 211
Query: 462 ITYKSDVWSLGCILYNMIYGR 482
D+WSLGCIL ++ G+
Sbjct: 212 ----IDMWSLGCILGEILCGK 228
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 27/180 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASKHL-YVLMEKGDTDLSKYMRNLNKMTTLPNTMI 365
E + KLQ P ++++HD + + + +L + L+ G+ R + +
Sbjct: 54 REARICRKLQH-PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI- 111
Query: 366 IIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQ 425
++L ++ H+ GI+H +LKP N L G +K+ DFG+A +
Sbjct: 112 ------QQILESIAYCHSNGIVHRNLKPENLLLASKAK------GAAVKLADFGLAIEVN 159
Query: 426 DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
D + +GT Y+SPE + S D+W+ G ILY ++ G P+
Sbjct: 160 DSEAW---HGFAGTPGYLSPEVLKKDPYSK---------PVDIWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 27/180 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASKHL-YVLMEKGDTDLSKYMRNLNKMTTLPNTMI 365
E + KLQ P ++++HD + + + +L + L+ G+ R + +
Sbjct: 53 REARICRKLQH-PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI- 110
Query: 366 IIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQ 425
++L ++ H+ GI+H +LKP N L G +K+ DFG+A +
Sbjct: 111 ------QQILESIAYCHSNGIVHRNLKPENLLLASKAK------GAAVKLADFGLAIEVN 158
Query: 426 DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
D + +GT Y+SPE + S D+W+ G ILY ++ G P+
Sbjct: 159 DSEAW---HGFAGTPGYLSPEVLKKDPYSK---------PVDIWACGVILYILLVGYPPF 206
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+A IIH DLKP+N L V DC LKI+D G+A D+ T
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSN-LAVNE-----DC---ELKILDGGLARHTDDEMTGY 182
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ GRT +
Sbjct: 183 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 113/269 (42%), Gaps = 48/269 (17%)
Query: 295 DITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT-DLSKYMR- 352
D T++ ++D ++E+E++ + +I + T LYV++E +L +Y+R
Sbjct: 78 DATEKDLSD-LVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRA 134
Query: 353 ----------NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++N++ T ++ Y++ ++ + + IH DL N L N
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN- 193
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGNTY 460
NV+KI DFG+A + + K T +G L +M+PEA
Sbjct: 194 --------NVMKIADFGLARDINN--IDXXKKTTNGRLPVKWMAPEALFDRV-------- 235
Query: 461 RITYKSDVWSLGCILYNMI-YGRTPYSHIP-NTWAKMLAIARHKDQIEFKPQLANNVTIP 518
T++SDVWS G +++ + G +PY IP K+L D KP N
Sbjct: 236 -YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD----KPANCTN---- 286
Query: 519 PTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
L M+ C P RPT V ++
Sbjct: 287 -ELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++ ++ + + IH DL N L N NV+KI DFG+A + +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTEN---------NVMKIADFGLARDINN--IDY 212
Query: 432 HKDTASGTL--NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHI 488
+K T +G L +M+PEA T++SDVWS G +++ + G +PY I
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
Query: 489 P-NTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
P K+L D KP N L M+ C P RPT V ++
Sbjct: 264 PVEELFKLLKEGHRMD----KPANCTN-----ELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++ ++ + + IH DL N L N NV+KI DFG+A + +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTEN---------NVMKIADFGLARDINN--IDY 212
Query: 432 HKDTASGTL--NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHI 488
+K T +G L +M+PEA T++SDVWS G +++ + G +PY I
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
Query: 489 P-NTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
P K+L D KP N L M+ C P RPT V ++
Sbjct: 264 PVEELFKLLKEGHRMD----KPANCTN-----ELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 27/199 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ALK V L D D+ + S L E+ LL +L+ ++++HD ++ + K L ++ E D
Sbjct: 30 VALKRVRLDD-DDEGVPSSALREICLLKELKH-KNIVRLHDVLH--SDKKLTLVFEFCDQ 85
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL KY + N P I+ +++L + H+ ++H DLKP N L N
Sbjct: 86 DLKKYFDSCNGDLD-PE---IVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRN---- 137
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
LK+ +FG+A + + TL Y P+ G Y +
Sbjct: 138 -----GELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVL------FGAKLYSTSI- 183
Query: 466 SDVWSLGCILYNMIYGRTP 484
D+WS GCI + P
Sbjct: 184 -DMWSAGCIFAELANAGRP 201
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 23/167 (13%)
Query: 319 PYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAV 378
P +I +HD VY+ + + +L +L ++ ++ T I ++L V
Sbjct: 75 PNIITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI-----KQILDGV 128
Query: 379 KEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASG 438
+H I H DLKP N + + + I +K+IDFG+A ++D V G
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPH-----IKLIDFGLAHEIED---GVEFKNIFG 180
Query: 439 TLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T +++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 181 TPEFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 27/180 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASKHL-YVLMEKGDTDLSKYMRNLNKMTTLPNTMI 365
E + KLQ P ++++HD + + + +L + L+ G+ R + +
Sbjct: 54 REARICRKLQH-PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI- 111
Query: 366 IIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQ 425
++L ++ H+ GI+H +LKP N L G +K+ DFG+A +
Sbjct: 112 ------QQILESIAYCHSNGIVHRNLKPENLLLASKAK------GAAVKLADFGLAIEVN 159
Query: 426 DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
D + +GT Y+SPE + S D+W+ G ILY ++ G P+
Sbjct: 160 DSEAW---HGFAGTPGYLSPEVLKKDPYSK---------PVDIWACGVILYILLVGYPPF 207
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+AGIIH DLKP+N + + L+I+DFG+A ++ T
Sbjct: 138 YQLLRGLKYIHSAGIIHRDLKPSNVAVNED---------SELRILDFGLARQADEEMTGY 188
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ G+ +
Sbjct: 189 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 124/267 (46%), Gaps = 43/267 (16%)
Query: 291 VDLSDITDQSIA-DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHL-YVLMEKGDTDLS 348
V + I + S++ D ++ E E++ KL P +++++ + A L + ME G LS
Sbjct: 54 VAIKTIKEGSMSEDDFIEEAEVMMKLSH-PKLVQLYGVCLEQAPICLVFEFMEHGC--LS 110
Query: 349 KYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDC 408
Y+R + T++ + + E + ++E A +IH DL N L N
Sbjct: 111 DYLRTQRGLFA-AETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGEN------- 159
Query: 409 IGNVLKIIDFGIACSLQDDKTSVHKDTASGT---LNYMSPEAAGQTSSSGGGNTYRITYK 465
V+K+ DFG+ + DD+ + +++GT + + SPE + R + K
Sbjct: 160 --QVIKVSDFGMTRFVLDDQYT----SSTGTKFPVKWASPEVFSFS---------RYSSK 204
Query: 466 SDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVWS G +++ + G+ PY + N+ +++ ++ +KP+LA+ + Q
Sbjct: 205 SDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGFRL-YKPRLAST-----HVYQI 256
Query: 525 MKLCLQKDPKARPTVGNSVTQINNNPE 551
M C ++ P+ RP + Q+ E
Sbjct: 257 MNHCWKERPEDRPAFSRLLRQLAEIAE 283
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 35/206 (16%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGC--PYVIKMHDYVYDTASKH---LYVLM 340
+ALK V + + ++ + S + EV LL +L+ P V+++ D + + + ++
Sbjct: 32 VALKSVRVPN-GEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVF 90
Query: 341 EKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG 400
E D DL Y+ + LP I +M + L + +HA I+H DLKP N L
Sbjct: 91 EHVDQDLRTYL-DKAPPPGLPAETIKDLMR--QFLRGLDFLHANCIVHRDLKPENILVTS 147
Query: 401 NVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTY 460
G +K+ DFG+A + + D TL Y +PE Q+
Sbjct: 148 ---------GGTVKLADFGLA---RIYSYQMALDPVVVTLWYRAPEVLLQS--------- 186
Query: 461 RITYKS--DVWSLGCILYNMIYGRTP 484
TY + D+WS+GCI M + R P
Sbjct: 187 --TYATPVDMWSVGCIFAEM-FRRKP 209
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 26/179 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMII 366
E +LQ P+V+ +HD+ ++ + G DL+ +R + P +
Sbjct: 83 REARTAGRLQE-PHVVPIHDFGEIDGQLYVDXRLING-VDLAAXLRRQGPLA--PPRAVA 138
Query: 367 IIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQD 426
I+ L A A H D+KP N L + + ++DFGIA + D
Sbjct: 139 IVRQIGSALDAAHAAGAT---HRDVKPENILVSAD---------DFAYLVDFGIASATTD 186
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+K + +T GTL Y +PE ++ + TY++D+++L C+LY + G PY
Sbjct: 187 EKLTQLGNTV-GTLYYXAPERFSESHA---------TYRADIYALTCVLYECLTGSPPY 235
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 22/114 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++L +K IH+AGIIH DLKP+N + + L+I+DFG+A ++ T
Sbjct: 138 YQLLRGLKYIHSAGIIHRDLKPSNVAVNED---------SELRILDFGLARQADEEMTGY 188
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T Y +PE N D+WS+GCI+ ++ G+ +
Sbjct: 189 -----VATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 58/276 (21%)
Query: 285 PLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---ME 341
P+A+K + + T++ D +L+E ++ + P +I++ V T + ++ ME
Sbjct: 79 PVAIKALK-AGYTERQRRD-FLSEASIMGQFD-HPNIIRLEGVV--TRGRLAMIVTEYME 133
Query: 342 KGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAV----KEIHAAGIIHSDLKPANFL 397
G D ++R + T IM ML V + + G +H DL N L
Sbjct: 134 NGSLD--TFLRTHDGQFT--------IMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVL 183
Query: 398 FVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGT-LNYMSPEA-AGQTSSSG 455
N+ V K+ DFG++ L+DD + T + + +PEA A +T SS
Sbjct: 184 VDSNL---------VCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSA 234
Query: 456 GGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKD---QIEFKPQL 511
SDVWS G +++ ++ YG PY ++ N +D +E +L
Sbjct: 235 ----------SDVWSFGVVMWEVLAYGERPYWNMTN-----------RDVISSVEEGYRL 273
Query: 512 ANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
+ P L Q M C KD RP V+ ++
Sbjct: 274 PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
A+KV ++I+ D + E E+L KL ++K+ +T ++H ++ME
Sbjct: 37 FAIKV--FNNISFLRPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTRHKVLIMEFCPC 93
Query: 346 D-LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLK 404
L + + LP + +I++ +++ + + GI+H ++KP GN+++
Sbjct: 94 GSLYTVLEEPSNAYGLPESEFLIVLR--DVVGGMNHLRENGIVHRNIKP------GNIMR 145
Query: 405 IIDCIG-NVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRIT 463
+I G +V K+ DFG A L+DD+ V GT Y+ P+ + + + +
Sbjct: 146 VIGEDGQSVYKLTDFGAARELEDDEQFV---XLYGTEEYLHPDMY-ERAVLRKDHQKKYG 201
Query: 464 YKSDVWSLGCILYNMIYGRTPY 485
D+WS+G Y+ G P+
Sbjct: 202 ATVDLWSIGVTFYHAATGSLPF 223
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 25/164 (15%)
Query: 386 IIHSDLKPANFLFVGNVLKIIDCIGNVL-KIIDFGIACSLQDDKTSVHKDTAS-GTLNYM 443
I+H DL+ N L+ +D V K+ DFG++ + SVH + G +M
Sbjct: 145 IVHRDLRSPNIF-----LQSLDENAPVCAKVADFGLS------QQSVHSVSGLLGNFQWM 193
Query: 444 SPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKD 503
+PE G S T K+D +S ILY ++ G P+ K + + R +
Sbjct: 194 APETIGAEEES-------YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
Query: 504 QIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
+P + + PP L ++LC DPK RP V +++
Sbjct: 247 ---LRPTIPEDC--PPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG-DT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYMPGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
D+ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 DMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + K+ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-KVADFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 27/189 (14%)
Query: 299 QSIADSYLNEVELLAKLQGCPYVIKMHD-YVYDTASKHLYVLMEKGDTDLSKYMRNLNKM 357
+S ++ E++ ++ L+ P ++ +HD + D +Y M G+ K NKM
Sbjct: 89 ESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGEL-FEKVADEHNKM 146
Query: 358 TTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIID 417
+ + + ++ + +H +H DLKP N +F N LK+ID
Sbjct: 147 SEDE-----AVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKR-------SNELKLID 194
Query: 418 FGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYN 477
FG+ L D K SV +GT + +PE A + Y +D+WS+G + Y
Sbjct: 195 FGLTAHL-DPKQSV--KVTTGTAEFAAPEVAEGKP---------VGYYTDMWSVGVLSYI 242
Query: 478 MIYGRTPYS 486
++ G +P+
Sbjct: 243 LLSGLSPFG 251
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 44/266 (16%)
Query: 289 KVVDLSDITDQSIADSYLNEVELLAKLQGC--PYVIKMHDYVYDTASKHLYVLMEK-GDT 345
++V + + +S + E+ ++ Q C P+V+K + + L+++ME G
Sbjct: 55 QIVAIKQVPVESDLQEIIKEISIM---QQCDSPHVVKYYGSYFKNTD--LWIVMEYCGAG 109
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+S +R NK TL I I+ L ++ +H IH D+K N L
Sbjct: 110 SVSDIIRLRNK--TLTEDEIATILQ--STLKGLEYLHFMRKIHRDIKAGNIL-------- 157
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
++ G+ K+ DFG+A L D ++ GT +M+PE + G N
Sbjct: 158 LNTEGHA-KLADFGVAGQLTD--XMAKRNXVIGTPFWMAPEVIQEI----GYNCV----- 205
Query: 466 SDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQL-ANNVTIPPTLLQS 524
+D+WSLG M G+ PY+ I A + I + KP+L ++N T
Sbjct: 206 ADIWSLGITAIEMAEGKPPYADIHPMRA-IFMIPTNPPPTFRKPELWSDNFT------DF 258
Query: 525 MKLCLQKDPKARPTVGNSVTQINNNP 550
+K CL K P+ R T TQ+ +P
Sbjct: 259 VKQCLVKSPEQRAT----ATQLLQHP 280
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 42/192 (21%)
Query: 366 IIIMHWYEMLL-AVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSL 424
++ + +E + V IH+ +IH DLKP+N V +KI DFG+ SL
Sbjct: 136 VLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDT---------KQVKIGDFGLVTSL 186
Query: 425 QDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTP 484
++D + GTL YMSPE Q SS G + D+++LG IL ++
Sbjct: 187 KNDGKRTR---SKGTLRYMSPE---QISSQDYGK------EVDLYALGLILAELL----- 229
Query: 485 YSHIPNTWAKMLAIARHKDQIEFKPQLANNV--TIPPTLLQSMKLCLQKDPKARP---TV 539
H+ +T A K + + + +++ TLLQ + L K P+ RP +
Sbjct: 230 --HVCDT-----AFETSKFFTDLRDGIISDIFDKKEKTLLQKL---LSKKPEDRPNTSEI 279
Query: 540 GNSVTQINNNPE 551
++T +PE
Sbjct: 280 LRTLTVWKKSPE 291
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG-DT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYMPGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
D+ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 DMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + K+ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-KVADFGFAKRVKGRTWXL-----CGTPEYLAPE----IILSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 374 MLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHK 433
+L A+ +HA G+IH D+K + L + G V K+ DFG C+ Q K +
Sbjct: 256 VLQALSVLHAQGVIHRDIKSDSILLTHD--------GRV-KLSDFGF-CA-QVSKEVPRR 304
Query: 434 DTASGTLNYMSPEAAGQTSSSGGGNTYRITY--KSDVWSLGCILYNMIYGRTPYSHIPNT 491
GT +M+PE R+ Y + D+WSLG ++ M+ G PY + P
Sbjct: 305 KXLVGTPYWMAPELIS-----------RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 353
Query: 492 WA-KMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
A KM+ +D + P+L N + P+L + L +DP R T
Sbjct: 354 KAMKMI-----RDNL--PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 397
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 35/263 (13%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+KV+ I + ++E +L K P+++ +H + + TA K +VL +
Sbjct: 67 AVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH-FSFQTADKLYFVLDYINGGE 125
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L +++ + P + E+ A+ +H+ I++ DLKP N L +
Sbjct: 126 LFYHLQR-ERCFLEPRAR----FYAAEIASALGYLHSLNIVYRDLKPENIL--------L 172
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
D G+++ + DFG+ C + S T GT Y++PE + Y T
Sbjct: 173 DSQGHIV-LTDFGL-CKENIEHNST-TSTFCGTPEYLAPEVLHK-------QPYDRT--V 220
Query: 467 DVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMK 526
D W LG +LY M+YG P+ + NT A+M +K ++ KP + N+ LL+ +
Sbjct: 221 DWWCLGAVLYEMLYGLPPF-YSRNT-AEMYDNILNK-PLQLKPNITNSAR---HLLEGL- 273
Query: 527 LCLQKDPKARPTVGNSVTQINNN 549
LQKD R + +I ++
Sbjct: 274 --LQKDRTKRLGAKDDFMEIKSH 294
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 17/113 (15%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
++L AV H G++H DLKP N L + G +K+ DFG+A ++ ++ +
Sbjct: 129 QILEAVLHCHQMGVVHRDLKPENLLLASKL------KGAAVKLADFGLAIEVEGEQQAWF 182
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+GT Y+SPE + D+W+ G ILY ++ G P+
Sbjct: 183 --GFAGTPGYLSPEVLRKDPYGK---------PVDLWACGVILYILLVGYPPF 224
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 25/153 (16%)
Query: 336 LYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPAN 395
+Y++ E +TDL+ N+ + L + M Y++L +K IH+A ++H DLKPAN
Sbjct: 97 VYIVQEYMETDLA----NVLEQGPLLEEHARLFM--YQLLRGLKYIHSANVLHRDLKPAN 150
Query: 396 FLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLN--YMSPEAAGQTSS 453
I+ VLKI DFG+A + D S + G + Y SP
Sbjct: 151 LF--------INTEDLVLKIGDFGLA-RIMDPHYSHKGHLSEGLVTKWYRSPRLLLSP-- 199
Query: 454 SGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
N Y T D+W+ GCI M+ G+T ++
Sbjct: 200 ----NNY--TKAIDMWAAGCIFAEMLTGKTLFA 226
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + +GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----AGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 42/252 (16%)
Query: 291 VDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---MEKGDTDL 347
V + I + + A ++L E ++ +L+ V + V + LY++ M KG L
Sbjct: 219 VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG--LYIVTEYMAKGS--L 274
Query: 348 SKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIID 407
Y+R+ + + ++ + ++ A++ + +H DL N L +
Sbjct: 275 VDYLRSRGRSVLGGDCLLKFSL---DVCEAMEYLEGNNFVHRDLAARNVLVSED------ 325
Query: 408 CIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSD 467
NV K+ DFG+ + S +DT + + +PEA + + + KSD
Sbjct: 326 ---NVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREK---------KFSTKSD 368
Query: 468 VWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMK 526
VWS G +L+ + +GR PY IP + ++E ++ PP + MK
Sbjct: 369 VWSFGILLWEIYSFGRVPYPRIP--------LKDVVPRVEKGYKMDAPDGCPPAVYDVMK 420
Query: 527 LCLQKDPKARPT 538
C D RPT
Sbjct: 421 NCWHLDAATRPT 432
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 27/189 (14%)
Query: 299 QSIADSYLNEVELLAKLQGCPYVIKMHD-YVYDTASKHLYVLMEKGDTDLSKYMRNLNKM 357
+S ++ E++ ++ L+ P ++ +HD + D +Y M G+ K NKM
Sbjct: 195 ESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGEL-FEKVADEHNKM 252
Query: 358 TTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIID 417
+ + + ++ + +H +H DLKP N +F N LK+ID
Sbjct: 253 SEDE-----AVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKR-------SNELKLID 300
Query: 418 FGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYN 477
FG+ L D K SV +GT + +PE A + Y +D+WS+G + Y
Sbjct: 301 FGLTAHL-DPKQSV--KVTTGTAEFAAPEVAEGKP---------VGYYTDMWSVGVLSYI 348
Query: 478 MIYGRTPYS 486
++ G +P+
Sbjct: 349 LLSGLSPFG 357
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 73/172 (42%), Gaps = 35/172 (20%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGT---LNYM 443
+H DL N L N+ V K+ DFG++ L+DD + +A G + +
Sbjct: 157 VHRDLAARNILVNSNL---------VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 207
Query: 444 SPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARH 501
+PEA YR T SDVWS G +++ M YG PY + N
Sbjct: 208 APEAI----------QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--------DV 249
Query: 502 KDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVG---NSVTQINNNP 550
+ IE +L + P L Q M C QKD RP G N++ ++ NP
Sbjct: 250 INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP 301
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 38/178 (21%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
++L A+ IH+ GIIH DLKP N ID NV KI DFG+A ++ +
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIF--------IDESRNV-KIGDFGLAKNVHRSLDILK 174
Query: 433 KD------------TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY 480
D +A GT Y++ E T G N K D++SLG I + MIY
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGT---GHYNE-----KIDMYSLGIIFFEMIY 226
Query: 481 GRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANN-VTIPPTLLQSMKLCLQKDPKARP 537
+ N K+ +++ IEF P +N + + ++ +L + DP RP
Sbjct: 227 PFSTGMERVNILKKLRSVS-----IEFPPDFDDNKMKVEKKII---RLLIDHDPNKRP 276
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 147
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 148 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 194
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ T GT Y++PE S G N
Sbjct: 195 IDQQGYI-QVTDFGFAKRVKGATW-----TLCGTPEYLAPEII----LSKGYNK-----A 239
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 240 VDWWALGVLIYEMAAGYPPF 259
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 35/181 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++ ++ + + IH DL N L + NV+KI DFG+A +
Sbjct: 146 YQVARGMEYLASKKCIHRDLAARNVLVTED---------NVMKIADFGLARDIH--HIDY 194
Query: 432 HKDTASGTL--NYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSLGCILYNMI-YGRTPYSH 487
+K T +G L +M+PEA RI T++SDVWS G +L+ + G +PY
Sbjct: 195 YKKTTNGRLPVKWMAPEALFD----------RIYTHQSDVWSFGVLLWEIFTLGGSPYPG 244
Query: 488 IP-NTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
+P K+L D KP N L M+ C P RPT V +
Sbjct: 245 VPVEELFKLLKEGHRMD----KPSNCTN-----ELYMMMRDCWHAVPSQRPTFKQLVEDL 295
Query: 547 N 547
+
Sbjct: 296 D 296
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 117/254 (46%), Gaps = 42/254 (16%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHL-YVLMEKGDTDLSKYMRNLNKMTTLP 361
+ ++ E E++ KL P +++++ + A L + ME G LS Y+R +
Sbjct: 47 EDFIEEAEVMMKLSH-PKLVQLYGVCLEQAPICLVFEFMEHGC--LSDYLRTQRGLFA-A 102
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
T++ + + E + ++E A +IH DL N L N V+K+ DFG+
Sbjct: 103 ETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGEN---------QVIKVSDFGMT 150
Query: 422 CSLQDDKTSVHKDTASGT---LNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNM 478
+ DD+ + +++GT + + SPE + R + KSDVWS G +++ +
Sbjct: 151 RFVLDDQYT----SSTGTKFPVKWASPEVFSFS---------RYSSKSDVWSFGVLMWEV 197
Query: 479 I-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
G+ PY + N+ +++ ++ +KP+LA+ + Q M C ++ P+ RP
Sbjct: 198 FSEGKIPYENRSNS--EVVEDISTGFRL-YKPRLAST-----HVYQIMNHCWKERPEDRP 249
Query: 538 TVGNSVTQINNNPE 551
+ Q+ E
Sbjct: 250 AFSRLLRQLAEIAE 263
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 35/181 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++ ++ + + IH DL N L + NV+KI DFG+A +
Sbjct: 149 YQVARGMEYLASKKCIHRDLAARNVLVTED---------NVMKIADFGLARDIH--HIDY 197
Query: 432 HKDTASGTL--NYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSLGCILYNMI-YGRTPYSH 487
+K T +G L +M+PEA RI T++SDVWS G +L+ + G +PY
Sbjct: 198 YKKTTNGRLPVKWMAPEALFD----------RIYTHQSDVWSFGVLLWEIFTLGGSPYPG 247
Query: 488 IP-NTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
+P K+L D KP N L M+ C P RPT V +
Sbjct: 248 VPVEELFKLLKEGHRMD----KPSNCTN-----ELYMMMRDCWHAVPSQRPTFKQLVEDL 298
Query: 547 N 547
+
Sbjct: 299 D 299
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG-DT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKEIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYAPGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N +
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLM-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + K+ DFG+A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-KVTDFGLAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 38/178 (21%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
++L A+ IH+ GIIH DLKP N ID NV KI DFG+A ++ +
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIF--------IDESRNV-KIGDFGLAKNVHRSLDILK 174
Query: 433 KD------------TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY 480
D +A GT Y++ E T G N K D++SLG I + MIY
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGT---GHYNE-----KIDMYSLGIIFFEMIY 226
Query: 481 GRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANN-VTIPPTLLQSMKLCLQKDPKARP 537
+ N K+ +++ IEF P +N + + ++ +L + DP RP
Sbjct: 227 PFSTGMERVNILKKLRSVS-----IEFPPDFDDNKMKVEKKII---RLLIDHDPNKRP 276
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 117/254 (46%), Gaps = 42/254 (16%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHL-YVLMEKGDTDLSKYMRNLNKMTTLP 361
+ ++ E E++ KL P +++++ + A L + ME G LS Y+R +
Sbjct: 45 EDFIEEAEVMMKLSH-PKLVQLYGVCLEQAPICLVFEFMEHGC--LSDYLRTQRGLFA-A 100
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
T++ + + E + ++E A +IH DL N L N V+K+ DFG+
Sbjct: 101 ETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGEN---------QVIKVSDFGMT 148
Query: 422 CSLQDDKTSVHKDTASGT---LNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNM 478
+ DD+ + +++GT + + SPE + R + KSDVWS G +++ +
Sbjct: 149 RFVLDDQYT----SSTGTKFPVKWASPEVFSFS---------RYSSKSDVWSFGVLMWEV 195
Query: 479 I-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
G+ PY + N+ +++ ++ +KP+LA+ + Q M C ++ P+ RP
Sbjct: 196 FSEGKIPYENRSNS--EVVEDISTGFRL-YKPRLAST-----HVYQIMNHCWKERPEDRP 247
Query: 538 TVGNSVTQINNNPE 551
+ Q+ E
Sbjct: 248 AFSRLLRQLAEIAE 261
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG-DT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYAPGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N +
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLM-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + K+ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-KVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 31/218 (14%)
Query: 284 KPLALK--VVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME 341
+P+A+K ++D DI L E++LL + P VI+ Y +T + LY+ +E
Sbjct: 40 RPVAVKRMLIDFCDIA--------LMEIKLLTESDDHPNVIRY--YCSETTDRFLYIALE 89
Query: 342 KGDTDLSKYMRNLN------KMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPAN 395
+ +L + + N K+ N + ++ ++ V +H+ IIH DLKP N
Sbjct: 90 LCNLNLQDLVESKNVSDENLKLQKEYNPISLL----RQIASGVAHLHSLKIIHRDLKPQN 145
Query: 396 FLFVGNVLKIID--CIGNVLKII--DFGIACSLQDDKTSVHK--DTASGTLNYMSPEAAG 449
L + D L+I+ DFG+ L ++S + SGT + +PE
Sbjct: 146 ILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLE 205
Query: 450 QTSSSGGGNTYRITYKSDVWSLGCILYNMIY-GRTPYS 486
+ S+ R+T D++S+GC+ Y ++ G+ P+
Sbjct: 206 E--SNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 117/254 (46%), Gaps = 42/254 (16%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHL-YVLMEKGDTDLSKYMRNLNKMTTLP 361
+ ++ E E++ KL P +++++ + A L + ME G LS Y+R +
Sbjct: 50 EDFIEEAEVMMKLSH-PKLVQLYGVCLEQAPICLVFEFMEHGC--LSDYLRTQRGLFA-A 105
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
T++ + + E + ++E A +IH DL N L N V+K+ DFG+
Sbjct: 106 ETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGEN---------QVIKVSDFGMT 153
Query: 422 CSLQDDKTSVHKDTASGT---LNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNM 478
+ DD+ + +++GT + + SPE + R + KSDVWS G +++ +
Sbjct: 154 RFVLDDQYT----SSTGTKFPVKWASPEVFSFS---------RYSSKSDVWSFGVLMWEV 200
Query: 479 I-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
G+ PY + N+ +++ ++ +KP+LA+ + Q M C ++ P+ RP
Sbjct: 201 FSEGKIPYENRSNS--EVVEDISTGFRL-YKPRLAST-----HVYQIMNHCWRERPEDRP 252
Query: 538 TVGNSVTQINNNPE 551
+ Q+ E
Sbjct: 253 AFSRLLRQLAEIAE 266
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 112/237 (47%), Gaps = 31/237 (13%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
EV +L ++Q P VI +H+ VY+ + + + +L ++ +T T +
Sbjct: 64 EVSILKEIQ-HPNVITLHE-VYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFL- 120
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG-NVLKIIDCIGNVLKIIDFGIACSLQD 426
++L V +H+ I H DLKP N + + NV K +KIIDFG+A +
Sbjct: 121 ----KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK------PRIKIIDFGLAHKI-- 168
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
D + K+ GT +++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 169 DFGNEFKNIF-GTPEFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF- 217
Query: 487 HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
+ +T + LA + EF+ + +N + ++ L KDPK R T+ +S+
Sbjct: 218 -LGDTKQETLANVSAVN-YEFEDEYFSNTSALAK--DFIRRLLVKDPKKRMTIQDSL 270
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG-DT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYAPGG 127
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N +
Sbjct: 128 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLM-------- 174
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + K+ DFG A ++ + GT Y++PE S G N
Sbjct: 175 IDQQGYI-KVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 219
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 374 MLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHK 433
+L A+ +HA G+IH D+K + L + G V K+ DFG C+ Q K +
Sbjct: 134 VLQALSVLHAQGVIHRDIKSDSILLTHD--------GRV-KLSDFGF-CA-QVSKEVPRR 182
Query: 434 DTASGTLNYMSPEAAGQTSSSGGGNTYRITY--KSDVWSLGCILYNMIYGRTPYSHIPNT 491
GT +M+PE R+ Y + D+WSLG ++ M+ G PY + P
Sbjct: 183 KXLVGTPYWMAPELIS-----------RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 231
Query: 492 WA-KMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
A KM+ +D + P+L N + P+L + L +DP R T
Sbjct: 232 KAMKMI-----RDNL--PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 275
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 23/165 (13%)
Query: 321 VIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKE 380
VI +HD VY+ + + +L +L ++ ++ T I ++L V
Sbjct: 77 VITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI-----KQILDGVNY 130
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+H I H DLKP N + + + I +K+IDFG+A ++D V GT
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPH-----IKLIDFGLAHEIED---GVEFKNIFGTP 182
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 183 EFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 35/181 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++ ++ + + IH DL N L + NV+KI DFG+A +
Sbjct: 150 YQVARGMEYLASKKCIHRDLAARNVLVTED---------NVMKIADFGLARDIH--HIDY 198
Query: 432 HKDTASGTL--NYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSLGCILYNMI-YGRTPYSH 487
+K T +G L +M+PEA RI T++SDVWS G +L+ + G +PY
Sbjct: 199 YKKTTNGRLPVKWMAPEALFD----------RIYTHQSDVWSFGVLLWEIFTLGGSPYPG 248
Query: 488 IP-NTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
+P K+L D KP N L M+ C P RPT V +
Sbjct: 249 VPVEELFKLLKEGHRMD----KPSNCTN-----ELYMMMRDCWHAVPSQRPTFKQLVEDL 299
Query: 547 N 547
+
Sbjct: 300 D 300
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 386 IIHSDLKPANFLFVGNVLKIIDCIGNVL-KIIDFGIACSLQDDKTSVHKDTAS-GTLNYM 443
I+H DL+ N L+ +D V K+ DFG + + SVH + G +M
Sbjct: 145 IVHRDLRSPNIF-----LQSLDENAPVCAKVADFGTS------QQSVHSVSGLLGNFQWM 193
Query: 444 SPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKD 503
+PE G S T K+D +S ILY ++ G P+ K + + R +
Sbjct: 194 APETIGAEEES-------YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
Query: 504 QIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
+P + + PP L ++LC DPK RP V +++
Sbjct: 247 ---LRPTIPEDC--PPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 35/181 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++ ++ + + IH DL N L + NV+KI DFG+A +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTED---------NVMKIADFGLARDIH--HIDY 205
Query: 432 HKDTASGTL--NYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSLGCILYNMI-YGRTPYSH 487
+K T +G L +M+PEA RI T++SDVWS G +L+ + G +PY
Sbjct: 206 YKKTTNGRLPVKWMAPEALFD----------RIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
Query: 488 IP-NTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
+P K+L D KP N L M+ C P RPT V +
Sbjct: 256 VPVEELFKLLKEGHRMD----KPSNCTN-----ELYMMMRDCWHAVPSQRPTFKQLVEDL 306
Query: 547 N 547
+
Sbjct: 307 D 307
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 374 MLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHK 433
+L A+ +HA G+IH D+K + L + G V K+ DFG C+ Q K +
Sbjct: 136 VLQALSVLHAQGVIHRDIKSDSILLTHD--------GRV-KLSDFGF-CA-QVSKEVPRR 184
Query: 434 DTASGTLNYMSPEAAGQTSSSGGGNTYRITY--KSDVWSLGCILYNMIYGRTPYSHIPNT 491
GT +M+PE R+ Y + D+WSLG ++ M+ G PY + P
Sbjct: 185 KXLVGTPYWMAPELIS-----------RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 233
Query: 492 WA-KMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
A KM+ +D + P+L N + P+L + L +DP R T
Sbjct: 234 KAMKMI-----RDNL--PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 277
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 374 MLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHK 433
+L A+ +HA G+IH D+K + L + G V K+ DFG C+ Q K +
Sbjct: 179 VLQALSVLHAQGVIHRDIKSDSILLTHD--------GRV-KLSDFGF-CA-QVSKEVPRR 227
Query: 434 DTASGTLNYMSPEAAGQTSSSGGGNTYRITY--KSDVWSLGCILYNMIYGRTPYSHIPNT 491
GT +M+PE R+ Y + D+WSLG ++ M+ G PY + P
Sbjct: 228 KXLVGTPYWMAPELIS-----------RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 276
Query: 492 WA-KMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
A KM+ +D + P+L N + P+L + L +DP R T
Sbjct: 277 KAMKMI-----RDNL--PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 320
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 35/181 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++ ++ + + IH DL N L + NV+KI DFG+A +
Sbjct: 142 YQVARGMEYLASKKCIHRDLAARNVLVTED---------NVMKIADFGLARDIH--HIDY 190
Query: 432 HKDTASGTL--NYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSLGCILYNMI-YGRTPYSH 487
+K T +G L +M+PEA RI T++SDVWS G +L+ + G +PY
Sbjct: 191 YKKTTNGRLPVKWMAPEALFD----------RIYTHQSDVWSFGVLLWEIFTLGGSPYPG 240
Query: 488 IP-NTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
+P K+L D KP N L M+ C P RPT V +
Sbjct: 241 VPVEELFKLLKEGHRMD----KPSNCTN-----ELYMMMRDCWHAVPSQRPTFKQLVEDL 291
Query: 547 N 547
+
Sbjct: 292 D 292
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 23/165 (13%)
Query: 321 VIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKE 380
VI +HD VY+ + + +L +L ++ ++ T I ++L V
Sbjct: 77 VITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI-----KQILDGVNY 130
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+H I H DLKP N + + + I +K+IDFG+A ++D V GT
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPH-----IKLIDFGLAHEIED---GVEFKNIFGTP 182
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 183 EFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 35/181 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++ ++ + + IH DL N L + NV+KI DFG+A +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTED---------NVMKIADFGLARDIH--HIDY 205
Query: 432 HKDTASGTL--NYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSLGCILYNMI-YGRTPYSH 487
+K T +G L +M+PEA RI T++SDVWS G +L+ + G +PY
Sbjct: 206 YKKTTNGRLPVKWMAPEALFD----------RIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
Query: 488 IP-NTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
+P K+L D KP N L M+ C P RPT V +
Sbjct: 256 VPVEELFKLLKEGHRMD----KPSNCTN-----ELYMMMRDCWHAVPSQRPTFKQLVEDL 306
Query: 547 N 547
+
Sbjct: 307 D 307
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 30/194 (15%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT- 345
+K +++S ++ + +S EV +LA ++ P +++ + + S LY++M+ +
Sbjct: 53 VIKEINISRMSSKEREESR-REVAVLANMKH-PNIVQYRESFEENGS--LYIVMDYCEGG 108
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWY-EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLK 404
DL K + N K I + W+ ++ LA+K +H I+H D+K N +
Sbjct: 109 DLFKRI-NAQKGVLFQEDQI---LDWFVQICLALKHVHDRKILHRDIKSQNIFLTKD--- 161
Query: 405 IIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
+++ DFGIA L + T GT Y+SPE +
Sbjct: 162 ------GTVQLGDFGIARVL--NSTVELARACIGTPYYLSPEICENKPYNN--------- 204
Query: 465 KSDVWSLGCILYNM 478
KSD+W+LGC+LY +
Sbjct: 205 KSDIWALGCVLYEL 218
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 16/115 (13%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQ--DDKTS 430
++ A+ +H GI H D+KP NFLF N K + +K++DFG++ ++
Sbjct: 176 QIFSALHYLHNQGICHRDIKPENFLFSTN--KSFE-----IKLVDFGLSKEFYKLNNGEY 228
Query: 431 VHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T +GT +++PE T+ S G K D WS G +L+ ++ G P+
Sbjct: 229 YGMTTKAGTPYFVAPEVLNTTNESYGP-------KCDAWSAGVLLHLLLMGAVPF 276
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 23/165 (13%)
Query: 321 VIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKE 380
VI +HD VY+ + + +L +L ++ ++ T I ++L V
Sbjct: 77 VITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI-----KQILDGVNY 130
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+H I H DLKP N + + + I +K+IDFG+A ++D V GT
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPH-----IKLIDFGLAHEIED---GVEFKNIFGTP 182
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 183 EFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 48/250 (19%)
Query: 296 ITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---MEKGDTDLSKYMR 352
I + + A ++L E ++ +L+ V + V + LY++ M KG L Y+R
Sbjct: 52 IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG--LYIVTEYMAKGS--LVDYLR 107
Query: 353 NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV 412
+ + + ++ + ++ A++ + +H DL N L + NV
Sbjct: 108 SRGRSVLGGDCLLKFSL---DVCEAMEYLEGNNFVHRDLAARNVLVSED---------NV 155
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLG 472
K+ DFG+ + S +DT + + +PEA + + + KSDVWS G
Sbjct: 156 AKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREK---------KFSTKSDVWSFG 201
Query: 473 CILYNMI-YGRTPYSHIPNTWAKMLAIARHKD---QIEFKPQLANNVTIPPTLLQSMKLC 528
+L+ + +GR PY IP KD ++E ++ PP + + MK C
Sbjct: 202 ILLWEIYSFGRVPYPRIP-----------LKDVVPRVEKGYKMDAPDGCPPAVYEVMKNC 250
Query: 529 LQKDPKARPT 538
D RP+
Sbjct: 251 WHLDAAMRPS 260
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 39/252 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYD---TASKHLYVLME--KGDTDLSKYMRNLNKMTTLP 361
EVEL + CP+++++ D VY+ K L ++ME G S+ ++ T
Sbjct: 63 REVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 121
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I+ + A++ +H+ I H D+KP N L+ I LK+ DFG A
Sbjct: 122 EASEIM----KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI------LKLTDFGFA 171
Query: 422 CSLQDDKTSVHKD--TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI 479
+T+ H T T Y++PE G D+WSLG I+Y ++
Sbjct: 172 -----KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS---------CDMWSLGVIMYILL 217
Query: 480 YGRTP-YSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
G P YS+ + + Q EF + V+ + +K+ ++ K PT
Sbjct: 218 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS------EEVKMLIRNLLKTEPT 271
Query: 539 VGNSVTQINNNP 550
++T+ N+P
Sbjct: 272 QRMTITEFMNHP 283
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----XGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 76/182 (41%), Gaps = 35/182 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++ ++ + + IH DL N L + NV+KI DFG+A +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTED---------NVMKIADFGLARDIH--HIDY 205
Query: 432 HKDTASGTL--NYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSLGCILYNMI-YGRTPYSH 487
+K T +G L +M+PEA RI T++SDVWS G +L+ + G +PY
Sbjct: 206 YKKTTNGRLPVKWMAPEALFD----------RIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
Query: 488 IP-NTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
+P K+L D KP N L M+ C P RPT V +
Sbjct: 256 VPVEELFKLLKEGHRMD----KPSNCTN-----ELYMMMRDCWHAVPSQRPTFKQLVEDL 306
Query: 547 NN 548
+
Sbjct: 307 DR 308
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 48/250 (19%)
Query: 296 ITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---MEKGDTDLSKYMR 352
I + + A ++L E ++ +L+ V + V + LY++ M KG L Y+R
Sbjct: 43 IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG--LYIVTEYMAKGS--LVDYLR 98
Query: 353 NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV 412
+ + + ++ + ++ A++ + +H DL N L + NV
Sbjct: 99 SRGRSVLGGDCLLKFSL---DVCEAMEYLEGNNFVHRDLAARNVLVSED---------NV 146
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLG 472
K+ DFG+ + S +DT + + +PEA + + S KSDVWS G
Sbjct: 147 AKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREAAFS---------TKSDVWSFG 192
Query: 473 CILYNMI-YGRTPYSHIPNTWAKMLAIARHKD---QIEFKPQLANNVTIPPTLLQSMKLC 528
+L+ + +GR PY IP KD ++E ++ PP + + MK C
Sbjct: 193 ILLWEIYSFGRVPYPRIP-----------LKDVVPRVEKGYKMDAPDGCPPAVYEVMKNC 241
Query: 529 LQKDPKARPT 538
D RP+
Sbjct: 242 WHLDAAMRPS 251
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 23/165 (13%)
Query: 321 VIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKE 380
VI +HD VY+ + + +L +L ++ ++ T I ++L V
Sbjct: 77 VITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI-----KQILDGVNY 130
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+H I H DLKP N + + + I +K+IDFG+A ++D V GT
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPH-----IKLIDFGLAHEIED---GVEFKNIFGTP 182
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 183 EFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 23/165 (13%)
Query: 321 VIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKE 380
VI +HD VY+ + + +L +L ++ ++ T I ++L V
Sbjct: 77 VITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI-----KQILDGVNY 130
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL 440
+H I H DLKP N + + + I +K+IDFG+A ++D V GT
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPH-----IKLIDFGLAHEIED---GVEFKNIFGTP 182
Query: 441 NYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+++PE N + ++D+WS+G I Y ++ G +P+
Sbjct: 183 EFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 35/181 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++ ++ + + IH DL N L + NV+KI DFG+A +
Sbjct: 198 YQVARGMEYLASKKCIHRDLAARNVLVTED---------NVMKIADFGLARDIH--HIDY 246
Query: 432 HKDTASGTL--NYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSLGCILYNMI-YGRTPYSH 487
+K T +G L +M+PEA RI T++SDVWS G +L+ + G +PY
Sbjct: 247 YKKTTNGRLPVKWMAPEALFD----------RIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296
Query: 488 IP-NTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
+P K+L D KP N L M+ C P RPT V +
Sbjct: 297 VPVEELFKLLKEGHRMD----KPSNCTN-----ELYMMMRDCWHAVPSQRPTFKQLVEDL 347
Query: 547 N 547
+
Sbjct: 348 D 348
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 42/249 (16%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHL-YVLMEKGDTDLSKYMRNLNKMTTLP 361
+ ++ E E++ KL P +++++ + A L + ME G LS Y+R +
Sbjct: 47 EDFIEEAEVMMKLSH-PKLVQLYGVCLEQAPICLVFEFMEHGC--LSDYLRTQRGLFA-A 102
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
T++ + + E + ++E A +IH DL N L N V+K+ DFG+
Sbjct: 103 ETLLGMCLDVCEGMAYLEE---ASVIHRDLAARNCLVGEN---------QVIKVSDFGMT 150
Query: 422 CSLQDDKTSVHKDTASGT---LNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNM 478
+ DD+ + +++GT + + SPE + R + KSDVWS G +++ +
Sbjct: 151 RFVLDDQYT----SSTGTKFPVKWASPEVFSFS---------RYSSKSDVWSFGVLMWEV 197
Query: 479 I-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
G+ PY + N+ +++ ++ +KP+LA+ + Q M C ++ P+ RP
Sbjct: 198 FSEGKIPYENRSNS--EVVEDISTGFRL-YKPRLAST-----HVYQIMNHCWKERPEDRP 249
Query: 538 TVGNSVTQI 546
+ Q+
Sbjct: 250 AFSRLLRQL 258
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 32/204 (15%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
+ +A+K++D + + S+ + EV ++ K+ P ++K+ + + K LY++ME
Sbjct: 41 REVAVKIIDKTQLNPTSLQKLF-REVRIM-KILNHPNIVKLFEVI--ETEKTLYLVMEYA 96
Query: 344 DT-DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++ Y+ +M + +++ AV+ H I+H DLK N L G++
Sbjct: 97 SGGEVFDYLVAHGRMKEKEARA-----KFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDM 151
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHK-DTASGTLNYMSPEAAGQTSSSGGGNTYR 461
+KI DFG + ++ T +K DT G+ Y +PE G
Sbjct: 152 ---------NIKIADFGFS----NEFTVGNKLDTFCGSPPYAAPELFQGKKYDGP----- 193
Query: 462 ITYKSDVWSLGCILYNMIYGRTPY 485
+ DVWSLG ILY ++ G P+
Sbjct: 194 ---EVDVWSLGVILYTLVSGSLPF 214
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 39/252 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYD---TASKHLYVLME--KGDTDLSKYMRNLNKMTTLP 361
EVEL + CP+++++ D VY+ K L ++ME G S+ ++ T
Sbjct: 65 REVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 123
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I+ + A++ +H+ I H D+KP N L+ I LK+ DFG A
Sbjct: 124 EASEIM----KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI------LKLTDFGFA 173
Query: 422 CSLQDDKTSVHKD--TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI 479
+T+ H T T Y++PE G D+WSLG I+Y ++
Sbjct: 174 -----KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS---------CDMWSLGVIMYILL 219
Query: 480 YGRTP-YSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
G P YS+ + + Q EF + V+ + +K+ ++ K PT
Sbjct: 220 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS------EEVKMLIRNLLKTEPT 273
Query: 539 VGNSVTQINNNP 550
++T+ N+P
Sbjct: 274 QRMTITEFMNHP 285
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 30/170 (17%)
Query: 374 MLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHK 433
+L A+ +HA G+IH D+K + L + G V K+ DFG C+ Q K +
Sbjct: 125 VLQALSVLHAQGVIHRDIKSDSILLTHD--------GRV-KLSDFGF-CA-QVSKEVPRR 173
Query: 434 DTASGTLNYMSPEAAGQTSSSGGGNTYRITY--KSDVWSLGCILYNMIYGRTPYSHIPNT 491
GT +M+PE R+ Y + D+WSLG ++ M+ G PY + P
Sbjct: 174 KXLVGTPYWMAPELIS-----------RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-- 220
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
+ A+ +D + P+L N + P+L + L +DP R T
Sbjct: 221 --PLKAMKMIRDNL--PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 266
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 113/259 (43%), Gaps = 45/259 (17%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K++ + + + E +LA L P++ ++H + T + +V+ D
Sbjct: 48 AIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHS-CFQTVDRLYFVMEYVNGGD 106
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L +++ + K P + + E+ + + +H GII+ DLK N + +
Sbjct: 107 LMYHIQQVGKFKE-PQA----VFYAAEISIGLFFLHKRGIIYRDLKLDNVM--------L 153
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
D G++ KI DFG+ D + + GT +Y++PE Y+ KS
Sbjct: 154 DSEGHI-KIADFGMCKEHMMDGVTTRE--FCGTPDYIAPEII----------AYQPYGKS 200
Query: 467 -DVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTL-LQS 524
D W+ G +LY M+ G+ P+ +D++ F+ + +NV+ P +L ++
Sbjct: 201 VDWWAYGVLLYEMLAGQPPFD------------GEDEDEL-FQSIMEHNVSYPKSLSKEA 247
Query: 525 MKLC---LQKDPKARPTVG 540
+ +C + K P R G
Sbjct: 248 VSICKGLMTKHPAKRLGCG 266
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYQMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 35/218 (16%)
Query: 284 KPLALK--VVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME 341
+P+A+K ++D DI L E++LL + P VI+ Y +T + LY+ +E
Sbjct: 58 RPVAVKRMLIDFCDIA--------LMEIKLLTESDDHPNVIRY--YCSETTDRFLYIALE 107
Query: 342 KGDTDLSKYMRNLN------KMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPAN 395
+ +L + + N K+ N + ++ ++ V +H+ IIH DLKP N
Sbjct: 108 LCNLNLQDLVESKNVSDENLKLQKEYNPISLL----RQIASGVAHLHSLKIIHRDLKPQN 163
Query: 396 FLFVGNVLKIID--CIGNVLKII--DFGIACSLQDDKTSVHK--DTASGTLNYMSPEAAG 449
L + D L+I+ DFG+ L + + SGT + +PE
Sbjct: 164 ILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLE 223
Query: 450 QTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYS 486
+++ R+T D++S+GC+ Y ++ G+ P+
Sbjct: 224 ESTKR------RLTRSIDIFSMGCVFYYILSKGKHPFG 255
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG-DT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYAPGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + P+ +++L + +H+ +I+ DLKP N +
Sbjct: 127 EMFSHLRRIGRFXE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLM-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + K+ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-KVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N I
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENL--------I 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----ISKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 374 MLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHK 433
+L A+ +HA G+IH D+K + L + G V K+ DFG C+ Q K +
Sbjct: 129 VLQALSVLHAQGVIHRDIKSDSILLTHD--------GRV-KLSDFGF-CA-QVSKEVPRR 177
Query: 434 DTASGTLNYMSPEAAGQTSSSGGGNTYRITY--KSDVWSLGCILYNMIYGRTPYSHIPNT 491
GT +M+PE R+ Y + D+WSLG ++ M+ G PY + P
Sbjct: 178 KXLVGTPYWMAPELIS-----------RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 226
Query: 492 WA-KMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
A KM+ +D + P+L N + P+L + L +DP R T
Sbjct: 227 KAMKMI-----RDNL--PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAE 270
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 39/252 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYD---TASKHLYVLME--KGDTDLSKYMRNLNKMTTLP 361
EVEL + CP+++++ D VY+ K L ++ME G S+ ++ T
Sbjct: 73 REVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 131
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I+ + A++ +H+ I H D+KP N L+ I LK+ DFG A
Sbjct: 132 EASEIM----KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI------LKLTDFGFA 181
Query: 422 CSLQDDKTSVHKD--TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI 479
+T+ H T T Y++PE G + D+WSLG I+Y ++
Sbjct: 182 -----KETTSHNSLTTPCYTPYYVAPEVLGPE---------KYDKSCDMWSLGVIMYILL 227
Query: 480 YGRTP-YSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
G P YS+ + + Q EF + V+ + +K+ ++ K PT
Sbjct: 228 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS------EEVKMLIRNLLKTEPT 281
Query: 539 VGNSVTQINNNP 550
++T+ N+P
Sbjct: 282 QRMTITEFMNHP 293
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 334 KHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKP 393
K +YV+++ ++DL + + ++ P T+ + Y++L +K +H+A +IH DLKP
Sbjct: 133 KSVYVVLDLMESDLHQIIH-----SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKP 187
Query: 394 ANFLFVGNVLKIIDCIGNVLKIIDFGIA---CSLQDDKTSVHKDTASGTLNYMSPEAAGQ 450
+N L N LKI DFG+A C+ + + + T Y +PE
Sbjct: 188 SNLLVNENC---------ELKIGDFGMARGLCTSPAEHQYFMTEYVA-TRWYRAPELM-- 235
Query: 451 TSSSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
+ + T D+WS+GCI M+ R
Sbjct: 236 ------LSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVPGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + K+ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-KVADFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 39/252 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYD---TASKHLYVLME--KGDTDLSKYMRNLNKMTTLP 361
EVEL + CP+++++ D VY+ K L ++ME G S+ ++ T
Sbjct: 59 REVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 117
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I+ + A++ +H+ I H D+KP N L+ I LK+ DFG A
Sbjct: 118 EASEIM----KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI------LKLTDFGFA 167
Query: 422 CSLQDDKTSVHKD--TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI 479
+T+ H T T Y++PE G D+WSLG I+Y ++
Sbjct: 168 -----KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS---------CDMWSLGVIMYILL 213
Query: 480 YGRTP-YSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
G P YS+ + + Q EF + V+ + +K+ ++ K PT
Sbjct: 214 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS------EEVKMLIRNLLKTEPT 267
Query: 539 VGNSVTQINNNP 550
++T+ N+P
Sbjct: 268 QRMTITEFMNHP 279
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 39/252 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYD---TASKHLYVLME--KGDTDLSKYMRNLNKMTTLP 361
EVEL + CP+++++ D VY+ K L ++ME G S+ ++ T
Sbjct: 64 REVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 122
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I+ + A++ +H+ I H D+KP N L+ I LK+ DFG A
Sbjct: 123 EASEIM----KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI------LKLTDFGFA 172
Query: 422 CSLQDDKTSVHKD--TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI 479
+T+ H T T Y++PE G D+WSLG I+Y ++
Sbjct: 173 -----KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS---------CDMWSLGVIMYILL 218
Query: 480 YGRTP-YSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
G P YS+ + + Q EF + V+ + +K+ ++ K PT
Sbjct: 219 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS------EEVKMLIRNLLKTEPT 272
Query: 539 VGNSVTQINNNP 550
++T+ N+P
Sbjct: 273 QRMTITEFMNHP 284
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 35/218 (16%)
Query: 284 KPLALK--VVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME 341
+P+A+K ++D DI L E++LL + P VI+ Y +T + LY+ +E
Sbjct: 58 RPVAVKRMLIDFCDIA--------LMEIKLLTESDDHPNVIRY--YCSETTDRFLYIALE 107
Query: 342 KGDTDLSKYMRNLN------KMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPAN 395
+ +L + + N K+ N + ++ ++ V +H+ IIH DLKP N
Sbjct: 108 LCNLNLQDLVESKNVSDENLKLQKEYNPISLL----RQIASGVAHLHSLKIIHRDLKPQN 163
Query: 396 FLFVGNVLKIID--CIGNVLKII--DFGIACSLQDDKTSVHK--DTASGTLNYMSPEAAG 449
L + D L+I+ DFG+ L + + SGT + +PE
Sbjct: 164 ILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLE 223
Query: 450 QTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYS 486
+++ R+T D++S+GC+ Y ++ G+ P+
Sbjct: 224 ESTKR------RLTRSIDIFSMGCVFYYILSKGKHPFG 255
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 39/252 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYD---TASKHLYVLME--KGDTDLSKYMRNLNKMTTLP 361
EVEL + CP+++++ D VY+ K L ++ME G S+ ++ T
Sbjct: 59 REVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 117
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I+ + A++ +H+ I H D+KP N L+ I LK+ DFG A
Sbjct: 118 EASEIM----KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI------LKLTDFGFA 167
Query: 422 CSLQDDKTSVHKD--TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI 479
+T+ H T T Y++PE G D+WSLG I+Y ++
Sbjct: 168 -----KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS---------CDMWSLGVIMYILL 213
Query: 480 YGRTP-YSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
G P YS+ + + Q EF + V+ + +K+ ++ K PT
Sbjct: 214 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS------EEVKMLIRNLLKTEPT 267
Query: 539 VGNSVTQINNNP 550
++T+ N+P
Sbjct: 268 QRMTITEFMNHP 279
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 48/250 (19%)
Query: 296 ITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVL---MEKGDTDLSKYMR 352
I + + A ++L E ++ +L+ V + V + LY++ M KG L Y+R
Sbjct: 37 IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG--LYIVTEYMAKGS--LVDYLR 92
Query: 353 NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV 412
+ + + ++ + ++ A++ + +H DL N L + NV
Sbjct: 93 SRGRSVLGGDCLLKFSL---DVCEAMEYLEGNNFVHRDLAARNVLVSED---------NV 140
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLG 472
K+ DFG+ + S +DT + + +PEA + + + KSDVWS G
Sbjct: 141 AKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREK---------KFSTKSDVWSFG 186
Query: 473 CILYNMI-YGRTPYSHIPNTWAKMLAIARHKD---QIEFKPQLANNVTIPPTLLQSMKLC 528
+L+ + +GR PY IP KD ++E ++ PP + + MK C
Sbjct: 187 ILLWEIYSFGRVPYPRIP-----------LKDVVPRVEKGYKMDAPDGCPPAVYEVMKNC 235
Query: 529 LQKDPKARPT 538
D RP+
Sbjct: 236 WHLDAAMRPS 245
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 37/251 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYD---TASKHLYVLMEKGDT-DLSKYMRNLNKMTTLPN 362
EVEL + CP+++++ D VY+ K L ++ME D +L +++
Sbjct: 103 REVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 161
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
I+ E A++ +H+ I H D+KP N L+ I LK+ DFG A
Sbjct: 162 EASEIMKSIGE---AIQYLHSINIAHRDVKPENLLYTSKRPNAI------LKLTDFGFA- 211
Query: 423 SLQDDKTSVHKD--TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY 480
+T+ H T T Y++PE G D+WSLG I+Y ++
Sbjct: 212 ----KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS---------CDMWSLGVIMYILLC 258
Query: 481 GRTP-YSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTV 539
G P YS+ + + Q EF + V+ + +K+ ++ K PT
Sbjct: 259 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS------EEVKMLIRNLLKTEPTQ 312
Query: 540 GNSVTQINNNP 550
++T+ N+P
Sbjct: 313 RMTITEFMNHP 323
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 127
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 128 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 174
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 175 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 219
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 34/166 (20%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGT---LNYM 443
+H DL N L N+ V K+ DFG++ L+DD + + T SG + +
Sbjct: 169 VHRDLAARNILVNSNL---------VCKVSDFGLSRVLEDDPEATY--TTSGGKIPIRWT 217
Query: 444 SPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARH 501
+PEA +YR T SDVWS G +++ M YG PY + N M AI
Sbjct: 218 APEAI----------SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-EVMKAI--- 263
Query: 502 KDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
D +L + P + Q M C Q++ RP + V+ ++
Sbjct: 264 NDGF----RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILD 305
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 32/204 (15%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K +A+K++D + + S+ + EV ++ K+ P ++K+ + + K LY++ME
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLF-REVRIM-KVLNHPNIVKLFEVI--ETEKTLYLVMEYA 95
Query: 344 DT-DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++ Y+ +M + +++ AV+ H I+H DLK N L
Sbjct: 96 SGGEVFDYLVAHGRMKEKEARA-----KFRQIVSAVQYCHQKFIVHRDLKAENLL----- 145
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHK-DTASGTLNYMSPEAAGQTSSSGGGNTYR 461
+D N+ KI DFG + ++ T +K DT G+ Y +PE G
Sbjct: 146 ---LDADMNI-KIADFGFS----NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP----- 192
Query: 462 ITYKSDVWSLGCILYNMIYGRTPY 485
+ DVWSLG ILY ++ G P+
Sbjct: 193 ---EVDVWSLGVILYTLVSGSLPF 213
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 32/204 (15%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K +A+K++D + + S+ + EV ++ K+ P ++K+ + + K LY++ME
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLF-REVRIM-KVLNHPNIVKLFEVI--ETEKTLYLVMEYA 95
Query: 344 DT-DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++ Y+ +M + +++ AV+ H I+H DLK N L
Sbjct: 96 SGGEVFDYLVAHGRMKEKEARA-----KFRQIVSAVQYCHQKFIVHRDLKAENLL----- 145
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHK-DTASGTLNYMSPEAAGQTSSSGGGNTYR 461
+D N+ KI DFG + ++ T +K DT G+ Y +PE G
Sbjct: 146 ---LDADMNI-KIADFGFS----NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP----- 192
Query: 462 ITYKSDVWSLGCILYNMIYGRTPY 485
+ DVWSLG ILY ++ G P+
Sbjct: 193 ---EVDVWSLGVILYTLVSGSLPF 213
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 39/252 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYD---TASKHLYVLME--KGDTDLSKYMRNLNKMTTLP 361
EVEL + CP+++++ D VY+ K L ++ME G S+ ++ T
Sbjct: 109 REVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 167
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I+ + A++ +H+ I H D+KP N L+ I LK+ DFG A
Sbjct: 168 EASEIM----KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI------LKLTDFGFA 217
Query: 422 CSLQDDKTSVHKD--TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI 479
+T+ H T T Y++PE G D+WSLG I+Y ++
Sbjct: 218 -----KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS---------CDMWSLGVIMYILL 263
Query: 480 YGRTP-YSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
G P YS+ + + Q EF + V+ + +K+ ++ K PT
Sbjct: 264 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS------EEVKMLIRNLLKTEPT 317
Query: 539 VGNSVTQINNNP 550
++T+ N+P
Sbjct: 318 QRMTITEFMNHP 329
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 32/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GD 344
A+K++D + + LNE +L + P+++K+ +Y + S +LY++ME
Sbjct: 69 FAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKL-EYSFKDNS-NLYMVMEYVPG 125
Query: 345 TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLK 404
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 126 GEMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL------- 173
Query: 405 IIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 -IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK----- 217
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVPGG 127
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 128 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 174
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ T GT Y++PE S G N
Sbjct: 175 IDQQGYI-QVTDFGFAKRVKGRTW-----TLCGTPEYLAPEII----LSKGYNK-----A 219
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 38/190 (20%)
Query: 304 SYLNEVELLAKLQGC--PYVIKMHDYVYDTASK-----HLYVLMEKGDTDLSKYMRNLNK 356
S + EV +L L+ P V+++ D T S+ L ++ E D DL+ Y+ + +
Sbjct: 57 STIREVAVLRHLETFEHPNVVRLFDVC--TVSRTDRETKLTLVFEHVDQDLTTYLDKVPE 114
Query: 357 MTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
+P I +M +++L + +H+ ++H DLKP N L + +K+
Sbjct: 115 -PGVPTETIKDMM--FQLLRGLDFLHSHRVVHRDLKPQNILVTSS---------GQIKLA 162
Query: 417 DFGIA--CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCI 474
DFG+A S Q TSV TL Y +PE Q+S + D+WS+GCI
Sbjct: 163 DFGLARIYSFQMALTSV-----VVTLWYRAPEVLLQSSYAT---------PVDLWSVGCI 208
Query: 475 LYNMIYGRTP 484
M + R P
Sbjct: 209 FAEM-FRRKP 217
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 26/116 (22%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACS--LQDDKTS 430
E++L ++ +H+ GI++ DLK N L +D G++ KI DFG+ L D KT
Sbjct: 127 EIILGLQFLHSKGIVYRDLKLDNIL--------LDKDGHI-KIADFGMCKENMLGDAKT- 176
Query: 431 VHKDTASGTLNYMSPE-AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GT +Y++PE GQ + + D WS G +LY M+ G++P+
Sbjct: 177 ---NEFCGTPDYIAPEILLGQ----------KYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 39/252 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYD---TASKHLYVLME--KGDTDLSKYMRNLNKMTTLP 361
EVEL + CP+++++ D VY+ K L ++ME G S+ ++ T
Sbjct: 57 REVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 115
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I+ + A++ +H+ I H D+KP N L+ I LK+ DFG A
Sbjct: 116 EASEIM----KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI------LKLTDFGFA 165
Query: 422 CSLQDDKTSVHKD--TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI 479
+T+ H T T Y++PE G D+WSLG I+Y ++
Sbjct: 166 -----KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS---------CDMWSLGVIMYILL 211
Query: 480 YGRTP-YSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
G P YS+ + + Q EF + V+ + +K+ ++ K PT
Sbjct: 212 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS------EEVKMLIRNLLKTEPT 265
Query: 539 VGNSVTQINNNP 550
++T+ N+P
Sbjct: 266 QRMTITEFMNHP 277
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 39/252 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYD---TASKHLYVLME--KGDTDLSKYMRNLNKMTTLP 361
EVEL + CP+++++ D VY+ K L ++ME G S+ ++ T
Sbjct: 58 REVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 116
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I+ + A++ +H+ I H D+KP N L+ I LK+ DFG A
Sbjct: 117 EASEIM----KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI------LKLTDFGFA 166
Query: 422 CSLQDDKTSVHKD--TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI 479
+T+ H T T Y++PE G D+WSLG I+Y ++
Sbjct: 167 -----KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS---------CDMWSLGVIMYILL 212
Query: 480 YGRTP-YSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
G P YS+ + + Q EF + V+ + +K+ ++ K PT
Sbjct: 213 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS------EEVKMLIRNLLKTEPT 266
Query: 539 VGNSVTQINNNP 550
++T+ N+P
Sbjct: 267 QRMTITEFMNHP 278
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 36/159 (22%)
Query: 385 GIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGT-LNYM 443
G +H DL N L N+ V K+ DFG++ ++DD +V+ T + +
Sbjct: 165 GYVHRDLAARNILVNSNL---------VCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWT 215
Query: 444 SPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARH 501
+PEA YR T SDVWS G +++ M YG PY + N
Sbjct: 216 APEAI----------QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN----------- 254
Query: 502 KD---QIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
+D IE +L + P L Q M C QK+ RP
Sbjct: 255 QDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERP 293
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 26/152 (17%)
Query: 334 KHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKP 393
K +YV+++ ++DL + + ++ P T+ + Y++L +K +H+A +IH DLKP
Sbjct: 132 KSVYVVLDLMESDLHQIIH-----SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKP 186
Query: 394 ANFLFVGNVLKIIDCIGNVLKIIDFGIA---CSLQDDKTSVHKDTASGTLNYMSPEAAGQ 450
+N L N C LKI DFG+A C+ + + + T Y +PE
Sbjct: 187 SNLLVNEN------C---ELKIGDFGMARGLCTSPAEHQYFMTEYVA-TRWYRAPELM-- 234
Query: 451 TSSSGGGNTYRITYKSDVWSLGCILYNMIYGR 482
+ + T D+WS+GCI M+ R
Sbjct: 235 ------LSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 116/254 (45%), Gaps = 42/254 (16%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYV-LMEKGDTDLSKYMRNLNKMTTLP 361
+ ++ E E++ KL P +++++ + A L ME G LS Y+R +
Sbjct: 48 EDFIEEAEVMMKLSH-PKLVQLYGVCLEQAPICLVTEFMEHGC--LSDYLRTQRGLFA-A 103
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
T++ + + E + ++E A +IH DL N L N V+K+ DFG+
Sbjct: 104 ETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGEN---------QVIKVSDFGMT 151
Query: 422 CSLQDDKTSVHKDTASGT---LNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNM 478
+ DD+ + +++GT + + SPE + R + KSDVWS G +++ +
Sbjct: 152 RFVLDDQYT----SSTGTKFPVKWASPEVFSFS---------RYSSKSDVWSFGVLMWEV 198
Query: 479 I-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
G+ PY + N+ +++ ++ +KP+LA+ + Q M C ++ P+ RP
Sbjct: 199 FSEGKIPYENRSNS--EVVEDISTGFRL-YKPRLAST-----HVYQIMNHCWRERPEDRP 250
Query: 538 TVGNSVTQINNNPE 551
+ Q+ E
Sbjct: 251 AFSRLLRQLAEIAE 264
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 26/116 (22%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACS--LQDDKTS 430
E++L ++ +H+ GI++ DLK N L +D G++ KI DFG+ L D KT
Sbjct: 126 EIILGLQFLHSKGIVYRDLKLDNIL--------LDKDGHI-KIADFGMCKENMLGDAKT- 175
Query: 431 VHKDTASGTLNYMSPE-AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GT +Y++PE GQ + + D WS G +LY M+ G++P+
Sbjct: 176 ---NXFCGTPDYIAPEILLGQ----------KYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 32/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GD 344
A+K++D + + LNE +L + P+++K+ +Y + S +LY++ME
Sbjct: 69 FAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKL-EYSFKDNS-NLYMVMEYVPG 125
Query: 345 TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLK 404
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 126 GEMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL------- 173
Query: 405 IIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 -IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK----- 217
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 32/201 (15%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GD 344
A+K++D + + LNE +L + P+++K+ +Y + S +LY++ME
Sbjct: 69 FAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKL-EYSFKDNS-NLYMVMEYVPG 125
Query: 345 TDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLK 404
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 126 GEMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL------- 173
Query: 405 IIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 -IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK----- 217
Query: 465 KSDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFAE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 35/206 (16%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGC--PYVIKMHDYVYDTASKH---LYVLM 340
+ALK V + + ++ + S + EV LL +L+ P V+++ D + + + ++
Sbjct: 32 VALKSVRVPN-GEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVF 90
Query: 341 EKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG 400
E D DL Y+ + LP I +M + L + +HA I+H DLKP N L
Sbjct: 91 EHVDQDLRTYL-DKAPPPGLPAETIKDLMR--QFLRGLDFLHANCIVHRDLKPENILVTS 147
Query: 401 NVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTY 460
G +K+ DFG+A + + ++ TL Y +PE Q+
Sbjct: 148 ---------GGTVKLADFGLA-RIYSYQMALFPVVV--TLWYRAPEVLLQS--------- 186
Query: 461 RITYKS--DVWSLGCILYNMIYGRTP 484
TY + D+WS+GCI M + R P
Sbjct: 187 --TYATPVDMWSVGCIFAEM-FRRKP 209
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 56 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVPGG 112
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 113 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 159
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ T GT Y++PE S G N
Sbjct: 160 IDQQGYI-QVTDFGFAKRVKGRTW-----TLCGTPEYLAPEII----LSKGYNK-----A 204
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 205 VDWWALGVLIYEMAAGYPPF 224
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 57 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 113
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 114 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 160
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 161 IDEQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 205
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 206 VDWWALGVLIYEMAAGYPPF 225
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 29/181 (16%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME--KGDTDLSKYMRNLNKMTTLPNTM 364
NE+ +L K++ ++ + D +Y++ + HLY++M+ G + + +T+
Sbjct: 69 NEIAVLRKIKH-ENIVALED-IYESPN-HLYLVMQLVSGGELFDRIVEKGFYTEKDASTL 125
Query: 365 IIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSL 424
I ++L AV +H GI+H DLKP N L+ D ++ I DFG+ S
Sbjct: 126 I------RQVLDAVYYLHRMGIVHRDLKPENLLYYSQ-----DEESKIM-ISDFGL--SK 171
Query: 425 QDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTP 484
+ K V TA GT Y++PE Q S D WS+G I Y ++ G P
Sbjct: 172 MEGKGDVM-STACGTPGYVAPEVLAQKPYSKA---------VDCWSIGVIAYILLCGYPP 221
Query: 485 Y 485
+
Sbjct: 222 F 222
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 83/190 (43%), Gaps = 38/190 (20%)
Query: 304 SYLNEVELLAKLQGC--PYVIKMHDYVYDTASKH---LYVLMEKGDTDLSKYMRNLNKMT 358
S + EV LL +L+ P V+++ D + + + ++ E D DL Y+ +
Sbjct: 57 STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL-DKAPPP 115
Query: 359 TLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDF 418
LP I +M + L + +HA I+H DLKP N L G +K+ DF
Sbjct: 116 GLPAETIKDLMR--QFLRGLDFLHANCIVHRDLKPENILVTS---------GGTVKLADF 164
Query: 419 GIA--CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS--DVWSLGCI 474
G+A S Q T V TL Y +PE Q+ TY + D+WS+GCI
Sbjct: 165 GLARIYSYQMALTPV-----VVTLWYRAPEVLLQS-----------TYATPVDMWSVGCI 208
Query: 475 LYNMIYGRTP 484
M + R P
Sbjct: 209 FAEM-FRRKP 217
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFXE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 35/181 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++ ++ + + IH DL N L + NV+KI DFG+A +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTED---------NVMKIADFGLARDIH--HIDX 205
Query: 432 HKDTASGTL--NYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSLGCILYNMI-YGRTPYSH 487
K T +G L +M+PEA RI T++SDVWS G +L+ + G +PY
Sbjct: 206 XKKTTNGRLPVKWMAPEALFD----------RIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
Query: 488 IP-NTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQI 546
+P K+L D KP N L M+ C P RPT V +
Sbjct: 256 VPVEELFKLLKEGHRMD----KPSNCTN-----ELYMMMRDCWHAVPSQRPTFKQLVEDL 306
Query: 547 N 547
+
Sbjct: 307 D 307
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG-DT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKEIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYAPGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N +
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLM-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG+A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGLAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ N ++++ M ++ A++ + IH DL N L N
Sbjct: 96 NLLDYLRECNRQEV--NAVVLLYMA-TQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 148
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 149 -----HLVKVADFGLSRLMTGDTXTAHAG-AKFPIKWTAPESLAYN---------KFSIK 193
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 194 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 245
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 246 MRACWQWNPSDRPSFAE 262
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 65 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 121
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 122 EMFSHLRRIGRFXE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 168
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 169 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 213
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 214 VDWWALGVLIYEMAAGYPPF 233
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 63/153 (41%), Gaps = 38/153 (24%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
IH DL+ AN L ++ V KI DFG+A + A + + +PE
Sbjct: 300 IHRDLRAANILVSASL---------VCKIADFGLA-----------RVGAKFPIKWTAPE 339
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQI 505
A N T KSDVWS G +L ++ YGR PY + N + R ++
Sbjct: 340 AI---------NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRALERG 385
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
P+ N P L M C + P+ RPT
Sbjct: 386 YRMPRPEN---CPEELYNIMMRCWKNRPEERPT 415
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 36/242 (14%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMII 366
NE+ ++ +L P +I +HD D L + G + KM+
Sbjct: 97 NEISIMNQLHH-PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAE----- 150
Query: 367 IIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDC---IGNVLKIIDFGIACS 423
+I + + +K +H I+H D+KP N + C + +KIIDFG+A
Sbjct: 151 VINYMRQACEGLKHMHEHSIVHLDIKPENIM----------CETKKASSVKIIDFGLATK 200
Query: 424 LQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRT 483
L D+ + T + +PE + + + +D+W++G + Y ++ G +
Sbjct: 201 LNPDEIV---KVTTATAEFAAPEIVDREP---------VGFYTDMWAIGVLGYVLLSGLS 248
Query: 484 PYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
P++ + + L + D EF ++V+ P +K LQK+P+ R TV +++
Sbjct: 249 PFAGEDDL--ETLQNVKRCDW-EFDEDAFSSVS--PEAKDFIKNLLQKEPRKRLTVHDAL 303
Query: 544 TQ 545
Sbjct: 304 EH 305
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 17/113 (15%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
++L AV H G++H +LKP N L + G +K+ DFG+A ++ ++ +
Sbjct: 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLK------GAAVKLADFGLAIEVEGEQQAWF 171
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+GT Y+SPE + D+W+ G ILY ++ G P+
Sbjct: 172 --GFAGTPGYLSPEVLRKDPYGK---------PVDLWACGVILYILLVGYPPF 213
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 39/208 (18%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGC--PYVIKMHDYVYDTASKH---LYVLM 340
+ALK V + + ++ + S + EV LL +L+ P V+++ D + + + ++
Sbjct: 32 VALKSVRVPN-GEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVF 90
Query: 341 EKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG 400
E D DL Y+ + LP I +M + L + +HA I+H DLKP N L
Sbjct: 91 EHVDQDLRTYL-DKAPPPGLPAETIKDLMR--QFLRGLDFLHANCIVHRDLKPENILVTS 147
Query: 401 NVLKIIDCIGNVLKIIDFGIA--CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGN 458
G +K+ DFG+A S Q V TL Y +PE Q+
Sbjct: 148 ---------GGTVKLADFGLARIYSYQMALAPV-----VVTLWYRAPEVLLQS------- 186
Query: 459 TYRITYKS--DVWSLGCILYNMIYGRTP 484
TY + D+WS+GCI M + R P
Sbjct: 187 ----TYATPVDMWSVGCIFAEM-FRRKP 209
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ N ++++ M ++ A++ + IH DL N L N
Sbjct: 100 NLLDYLRECNRQEV--NAVVLLYMA-TQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 152
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 153 -----HLVKVADFGLSRLMTGDTXTAHAG-AKFPIKWTAPESLAYN---------KFSIK 197
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 198 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 249
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 250 MRACWQWNPSDRPSFAE 266
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG-DT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYAPGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N +
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLM-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ N ++++ M ++ A++ + IH DL N L N
Sbjct: 100 NLLDYLRECNRQEV--NAVVLLYMA-TQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 152
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 153 -----HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN---------KFSIK 197
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 198 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 249
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 250 MRACWQWNPSDRPSFAE 266
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFXE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 38/190 (20%)
Query: 304 SYLNEVELLAKLQGC--PYVIKMHDYVYDTASK-----HLYVLMEKGDTDLSKYMRNLNK 356
S + EV +L L+ P V+++ D T S+ L ++ E D DL+ Y+ + +
Sbjct: 57 STIREVAVLRHLETFEHPNVVRLFDVC--TVSRTDRETKLTLVFEHVDQDLTTYLDKVPE 114
Query: 357 MTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
+P I +M +++L + +H+ ++H DLKP N L + +K+
Sbjct: 115 -PGVPTETIKDMM--FQLLRGLDFLHSHRVVHRDLKPQNILVTSS---------GQIKLA 162
Query: 417 DFGIA--CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCI 474
DFG+A S Q TSV TL Y +PE Q+S + D+WS+GCI
Sbjct: 163 DFGLARIYSFQMALTSV-----VVTLWYRAPEVLLQSSYAT---------PVDLWSVGCI 208
Query: 475 LYNMIYGRTP 484
M + R P
Sbjct: 209 FAEM-FRRKP 217
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 336 LYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPAN 395
+Y++ E TDL + + +M + + I Y+ L AVK +H + +IH DLKP+N
Sbjct: 89 VYIIQELMQTDLHRVIST--QMLSDDHIQYFI----YQTLRAVKVLHGSNVIHRDLKPSN 142
Query: 396 FLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSG 455
L N LK+ DFG+A + D+++ +G + M+ A + +
Sbjct: 143 LLINSNC---------DLKVCDFGLARII--DESAADNSEPTGQQSGMTEXVATRWYRAP 191
Query: 456 GGNTYRITYKS--DVWSLGCILYNMIYGR 482
Y DVWS GCIL + R
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 38/190 (20%)
Query: 304 SYLNEVELLAKLQGC--PYVIKMHDYVYDTASK-----HLYVLMEKGDTDLSKYMRNLNK 356
S + EV +L L+ P V+++ D T S+ L ++ E D DL+ Y+ + +
Sbjct: 57 STIREVAVLRHLETFEHPNVVRLFDVC--TVSRTDRETKLTLVFEHVDQDLTTYLDKVPE 114
Query: 357 MTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
+P I +M +++L + +H+ ++H DLKP N L + +K+
Sbjct: 115 -PGVPTETIKDMM--FQLLRGLDFLHSHRVVHRDLKPQNILVTSS---------GQIKLA 162
Query: 417 DFGIA--CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCI 474
DFG+A S Q TSV TL Y +PE Q+S + D+WS+GCI
Sbjct: 163 DFGLARIYSFQMALTSV-----VVTLWYRAPEVLLQSSYAT---------PVDLWSVGCI 208
Query: 475 LYNMIYGRTP 484
M + R P
Sbjct: 209 FAEM-FRRKP 217
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 32/204 (15%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K +A++++D + + S+ + EV ++ K+ P ++K+ + + K LY++ME
Sbjct: 40 KEVAVRIIDKTQLNSSSLQKLF-REVRIM-KVLNHPNIVKLFEVI--ETEKTLYLVMEYA 95
Query: 344 DT-DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++ Y+ +M + +++ AV+ H I+H DLK N L
Sbjct: 96 SGGEVFDYLVAHGRMKEKEARA-----KFRQIVSAVQYCHQKFIVHRDLKAENLL----- 145
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHK-DTASGTLNYMSPEAAGQTSSSGGGNTYR 461
+D N+ KI DFG + ++ T +K DT G+ Y +PE G
Sbjct: 146 ---LDADMNI-KIADFGFS----NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP----- 192
Query: 462 ITYKSDVWSLGCILYNMIYGRTPY 485
+ DVWSLG ILY ++ G P+
Sbjct: 193 ---EVDVWSLGVILYTLVSGSLPF 213
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ N ++++ M ++ A++ + IH DL N L N
Sbjct: 108 NLLDYLRECNRQEV--NAVVLLYMA-TQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 160
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 161 -----HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN---------KFSIK 205
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 206 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 257
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 258 MRACWQWNPSDRPSFAE 274
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 147
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 148 EMFSHLRRIGRFXE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 194
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 195 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 239
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 240 VDWWALGVLIYEMAAGYPPF 259
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ N ++++ M ++ A++ + IH DL N L N
Sbjct: 97 NLLDYLRECNRQEV--NAVVLLYMA-TQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 149
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 150 -----HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN---------KFSIK 194
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 195 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 246
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 247 MRACWQWNPSDRPSFAE 263
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 37/202 (18%)
Query: 300 SIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMRNLNKM- 357
+I + + E+++L + PY++ + Y + + + ME D L + ++ ++
Sbjct: 108 AIRNQIIRELQVLHECN-SPYIVGFYGAFY--SDGEISICMEHMDGGSLDQVLKKAGRIP 164
Query: 358 -TTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
L I +I + L ++E H I+H D+KP+N L ++ G + K+
Sbjct: 165 EQILGKVSIAVI----KGLTYLREKHK--IMHRDVKPSNIL--------VNSRGEI-KLC 209
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG++ L D ++ GT +YMSPE T S +SD+WS+G L
Sbjct: 210 DFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYS---------VQSDIWSMGLSLV 256
Query: 477 NMIYGRTPYSHIPNTWAKMLAI 498
M GR P IP AK L +
Sbjct: 257 EMAVGRYP---IPPPDAKELEL 275
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG-DT 345
A+K++D + + LNE +L + P++ K+ D ++ LY++ME
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLTKLEFSFKDNSN--LYMVMEYAPGG 127
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N +
Sbjct: 128 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLM-------- 174
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + K+ DFG A ++ + GT Y++PE S G N
Sbjct: 175 IDQQGYI-KVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 219
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 386 IIHSDLKPANFLFVGNVLKIIDCIGNVL-KIIDFGIACSLQDDKTSVHKDTAS-GTLNYM 443
I+H DL+ N L+ +D V K+ DF ++ + SVH + G +M
Sbjct: 145 IVHRDLRSPNIF-----LQSLDENAPVCAKVADFSLS------QQSVHSVSGLLGNFQWM 193
Query: 444 SPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKD 503
+PE G S T K+D +S ILY ++ G P+ K + + R +
Sbjct: 194 APETIGAEEES-------YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
Query: 504 QIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
+P + + PP L ++LC DPK RP V +++
Sbjct: 247 ---LRPTIPEDC--PPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 22/145 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL KY+ L I ++ ++ A++ +H IIH DLKP N + ++
Sbjct: 105 DLRKYLNQFENCCGLKEGPIRTLLS--DISSALRYLHENRIIHRDLKPENIVLQPGPQRL 162
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
I KIID G A L + GTL Y++PE Q + T
Sbjct: 163 IH------KIIDLGYAKELDQGELCTE---FVGTLQYLAPELLEQK---------KYTVT 204
Query: 466 SDVWSLGCILYNMIYGRTPYSHIPN 490
D WS G + + I G P+ +PN
Sbjct: 205 VDYWSFGTLAFECITGFRPF--LPN 227
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG-DT 345
A+K++D + + LNE +L + P++ K+ D ++ LY++ME
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLTKLEFSFKDNSN--LYMVMEYAPGG 127
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N +
Sbjct: 128 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLM-------- 174
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + K+ DFG A ++ + GT Y++PE S G N
Sbjct: 175 IDQQGYI-KVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 219
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 22/145 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL KY+ L I ++ ++ A++ +H IIH DLKP N + ++
Sbjct: 104 DLRKYLNQFENCCGLKEGPIRTLLS--DISSALRYLHENRIIHRDLKPENIVLQPGPQRL 161
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
I KIID G A L + GTL Y++PE Q + T
Sbjct: 162 IH------KIIDLGYAKELDQGELCTE---FVGTLQYLAPELLEQK---------KYTVT 203
Query: 466 SDVWSLGCILYNMIYGRTPYSHIPN 490
D WS G + + I G P+ +PN
Sbjct: 204 VDYWSFGTLAFECITGFRPF--LPN 226
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFXE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 33/198 (16%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ + ++++ ++ A++ + IH DL N L N
Sbjct: 93 NLLDYLRECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 145
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 146 -----HLVKVADFGLSRLMTGDTXTAHAG-AKFPIKWTAPESLAYN---------KFSIK 190
Query: 466 SDVWSLGCILYNM-IYGRTPYSHI-PNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQ 523
SDVW+ G +L+ + YG +PY I P+ ++L KD +P+ P + +
Sbjct: 191 SDVWAFGVLLWEIATYGMSPYPGIDPSQVYELL----EKDYRMERPE-----GCPEKVYE 241
Query: 524 SMKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 242 LMRACWQWNPSDRPSFAE 259
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 161
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAE--------PVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 161
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAE--------PVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 161
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAE--------PVDVWSCGIVLTAMLAGELPW 207
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 30/203 (14%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
+ +A+K++D + + S+ + EV ++ K+ P ++K+ + + K LY++ME
Sbjct: 38 REVAIKIIDKTQLNPTSLQKLF-REVRIM-KILNHPNIVKLFEVI--ETEKTLYLIMEYA 93
Query: 344 DT-DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++ Y+ +M + +++ AV+ H I+H DLK N L
Sbjct: 94 SGGEVFDYLVAHGRMKEKEARS-----KFRQIVSAVQYCHQKRIVHRDLKAENLL----- 143
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI 462
+D N+ KI DFG + DT G+ Y +PE G
Sbjct: 144 ---LDADMNI-KIADFGFSNEFT---VGGKLDTFCGSPPYAAPELFQGKKYDGP------ 190
Query: 463 TYKSDVWSLGCILYNMIYGRTPY 485
+ DVWSLG ILY ++ G P+
Sbjct: 191 --EVDVWSLGVILYTLVSGSLPF 211
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ N ++++ M ++ A++ + IH DL N L N
Sbjct: 97 NLLDYLRECNRQEV--NAVVLLYMA-TQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 149
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 150 -----HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN---------KFSIK 194
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 195 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 246
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 247 MRACWQWNPSDRPSFAE 263
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ N ++++ M ++ A++ + IH DL N L N
Sbjct: 100 NLLDYLRECNRQEV--NAVVLLYMA-TQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 152
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 153 -----HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN---------KFSIK 197
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 198 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 249
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 250 MRACWQWNPSDRPSFAE 266
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVPGG 127
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 128 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 174
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 175 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 219
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 108/262 (41%), Gaps = 42/262 (16%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A+K V+ S + I +LNE ++ C +V+++ V L V+
Sbjct: 50 VAVKTVNESASLRERI--EFLNEASVMKGFT-CHHVVRLLGVV-SKGQPTLVVMELMAHG 105
Query: 346 DLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG 400
DL Y+R+L N P T+ +I E+ + ++A +H DL N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH 165
Query: 401 NVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGN 458
+ +KI DFG+ + + T+ ++ G L +M+PE+
Sbjct: 166 DF---------TVKIGDFGMTRDIYE--TAYYRKGGKGLLPVRWMAPESLKDGV------ 208
Query: 459 TYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWA-KMLAIARHKDQIEFKPQLANNVT 516
T SD+WS G +L+ + PY + N K + + DQ + P+ ++
Sbjct: 209 ---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL- 264
Query: 517 IPPTLLQSMKLCLQKDPKARPT 538
M++C Q +PK RPT
Sbjct: 265 --------MRMCWQFNPKMRPT 278
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVPGG 127
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 128 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 174
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 175 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 219
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVPGG 127
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 128 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 174
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 175 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 219
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVPGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ N ++++ M ++ A++ + IH DL N L N
Sbjct: 100 NLLDYLRECNRQEV--NAVVLLYMA-TQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 152
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 153 -----HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN---------KFSIK 197
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 198 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 249
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 250 MRACWQWNPSDRPSFAE 266
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVPGG 127
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 128 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 174
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 175 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 219
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVPGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 162
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 163 LLNKMXGTLPYVAPELLKRREFHAE--------PVDVWSCGIVLTAMLAGELPW 208
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 105/242 (43%), Gaps = 41/242 (16%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
EV +L +++ P +I +HD +++ + + +L +L ++ +T T +
Sbjct: 58 EVNILREIR-HPNIITLHD-IFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFL- 114
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV----LKIIDFGIACS 423
++L V +H+ I H DLKP N + + NV +K+IDFGIA
Sbjct: 115 ----KQILDGVHYLHSKRIAHFDLKPENIMLLDK---------NVPNPRIKLIDFGIAHK 161
Query: 424 LQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRT 483
++ GT +++PE N + ++D+WS+G I Y ++ G +
Sbjct: 162 IE---AGNEFKNIFGTPEFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 209
Query: 484 PY--SHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
P+ T + A+ D+ F +N + ++ + L KDPK R T+
Sbjct: 210 PFLGETKQETLTNISAVNYDFDEEYF----SNTSELAKDFIRRL---LVKDPKRRMTIAQ 262
Query: 542 SV 543
S+
Sbjct: 263 SL 264
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 161
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAE--------PVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 161
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAE--------PVDVWSCGIVLTAMLAGELPW 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ N ++++ M ++ A++ + IH DL N L N
Sbjct: 95 NLLDYLRECNRQEV--NAVVLLYMA-TQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 147
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 148 -----HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN---------KFSIK 192
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 193 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 244
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 245 MRACWQWNPSDRPSFAE 261
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ N ++++ M ++ A++ + IH DL N L N
Sbjct: 99 NLLDYLRECNRQEV--NAVVLLYMA-TQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 151
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 152 -----HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN---------KFSIK 196
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 197 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 248
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 249 MRACWQWNPSDRPSFAE 265
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVPGG 147
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 148 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 194
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 195 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 239
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 240 VDWWALGVLIYEMAAGYPPF 259
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 336 LYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPAN 395
+Y++ E TDL + + +M + + I Y+ L AVK +H + +IH DLKP+N
Sbjct: 89 VYIIQELMQTDLHRVIST--QMLSDDHIQYFI----YQTLRAVKVLHGSNVIHRDLKPSN 142
Query: 396 FLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSG 455
L N LK+ DFG+A + D+++ +G + M+ A + +
Sbjct: 143 LLINSNC---------DLKVCDFGLARII--DESAADNSEPTGQQSGMTEYVATRWYRAP 191
Query: 456 GGNTYRITYKS--DVWSLGCILYNMIYGR 482
Y DVWS GCIL + R
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 161
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAE--------PVDVWSCGIVLTAMLAGELPW 207
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 33/198 (16%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ + ++++ ++ A++ + IH DL N L N
Sbjct: 93 NLLDYLRECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 145
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 146 -----HLVKVADFGLSRLMTGDTXTAHAG-AKFPIKWTAPESLAYN---------KFSIK 190
Query: 466 SDVWSLGCILYNM-IYGRTPYSHI-PNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQ 523
SDVW+ G +L+ + YG +PY I P+ ++L KD +P+ P + +
Sbjct: 191 SDVWAFGVLLWEIATYGMSPYPGIDPSQVYELL----EKDYRMERPE-----GCPEKVYE 241
Query: 524 SMKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 242 LMRACWQWNPSDRPSFAE 259
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 63 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVPGG 119
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 120 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 166
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 167 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 211
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 212 VDWWALGVLIYEMAAGYPPF 231
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 21/119 (17%)
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQ-D 426
I+ ++ ++ +H I+H DLKP N L V K I KIIDFG+A +
Sbjct: 190 ILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQI-------KIIDFGLARRYKPR 242
Query: 427 DKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+K V+ GT +++PE N +++ +D+WS+G I Y ++ G +P+
Sbjct: 243 EKLKVN----FGTPEFLAPEVV---------NYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 110 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 160
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 161 LLNKMCGTLPYVAPELLKRREFHAE--------PVDVWSCGIVLTAMLAGELPW 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 17/116 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 162
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSH 487
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAE--------PVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 161
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFH--------AEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 26/153 (16%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
IH D+ N L G+V KI DFG+A + +D + K A + +M+PE
Sbjct: 188 IHRDVAARNVLLTN---------GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 238
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQI 505
+ T +SDVWS G +L+ + G PY I L ++ +
Sbjct: 239 SIFDCV---------YTVQSDVWSYGILLWEIFSLGLNPYPGI-------LVNSKFYKLV 282
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
+ Q+A P + M+ C +P RPT
Sbjct: 283 KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 315
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 31/218 (14%)
Query: 284 KPLALK--VVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME 341
+P+A+K ++D DI L E++LL + P VI+ Y +T + LY+ +E
Sbjct: 40 RPVAVKRMLIDFCDIA--------LMEIKLLTESDDHPNVIRY--YCSETTDRFLYIALE 89
Query: 342 KGDTDLSKYMRNLN------KMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPAN 395
+ +L + + N K+ N + ++ ++ V +H+ IIH DLKP N
Sbjct: 90 LCNLNLQDLVESKNVSDENLKLQKEYNPISLL----RQIASGVAHLHSLKIIHRDLKPQN 145
Query: 396 FLFVGNVLKIID--CIGNVLKII--DFGIACSLQDDKTSVHK--DTASGTLNYMSPEAAG 449
L + D L+I+ DFG+ L + + SGT + +PE
Sbjct: 146 ILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLE 205
Query: 450 QTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYS 486
+ S+ R+T D++S+GC+ Y ++ G+ P+
Sbjct: 206 E--SNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVPGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 162
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFH--------AEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Query: 336 LYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPAN 395
+Y++ E TDL + + +M + + I Y+ L AVK +H + +IH DLKP+N
Sbjct: 89 VYIIQELMQTDLHRVIST--QMLSDDHIQYFI----YQTLRAVKVLHGSNVIHRDLKPSN 142
Query: 396 FLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTA--SGTLNYMSPEAAGQTSS 453
L N LK+ DFG+A + + + T SG + +++
Sbjct: 143 LLINSNC---------DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEV 193
Query: 454 SGGGNTYRITYKSDVWSLGCILYNMIYGR 482
Y + DVWS GCIL + R
Sbjct: 194 MLTSAKY--SRAMDVWSCGCILAELFLRR 220
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 161
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAE--------PVDVWSCGIVLTAMLAGELPW 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ N ++++ M ++ A++ + IH DL N L N
Sbjct: 95 NLLDYLRECNRQEV--NAVVLLYMA-TQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 147
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 148 -----HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN---------KFSIK 192
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 193 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 244
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 245 MRACWQWNPSDRPSFAE 261
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 33/198 (16%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ + ++++ ++ A++ + IH DL N L N
Sbjct: 93 NLLDYLRECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 145
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 146 -----HLVKVADFGLSRLMTGDTFTAHAG-AKFPIKWTAPESLAYN---------KFSIK 190
Query: 466 SDVWSLGCILYNM-IYGRTPYSHI-PNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQ 523
SDVW+ G +L+ + YG +PY I P+ ++L KD +P+ P + +
Sbjct: 191 SDVWAFGVLLWEIATYGMSPYPGIDPSQVYELL----EKDYRMERPE-----GCPEKVYE 241
Query: 524 SMKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 242 LMRACWQWNPSDRPSFAE 259
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 162
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFH--------AEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 162
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFH--------AEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 162
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFH--------AEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 161
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAE--------PVDVWSCGIVLTAMLAGELPW 207
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 31/194 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ N ++++ M ++ A++ + IH +L N L N
Sbjct: 299 NLLDYLRECNRQEV--NAVVLLYMA-TQISSAMEYLEKKNFIHRNLAARNCLVGEN---- 351
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 352 -----HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN---------KFSIK 396
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 397 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 448
Query: 525 MKLCLQKDPKARPT 538
M+ C Q +P RP+
Sbjct: 449 MRACWQWNPSDRPS 462
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 162
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAE--------PVDVWSCGIVLTAMLAGELPW 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 161
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAE--------PVDVWSCGIVLTAMLAGELPW 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 161
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAE--------PVDVWSCGIVLTAMLAGELPW 207
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG-DT 345
A+K++D + + LNE +L + P++ K+ D ++ LY++ME
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLTKLEFSFKDNSN--LYMVMEYAPGG 127
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + P+ +++L + +H+ +I+ DLKP N +
Sbjct: 128 EMFSHLRRIGRFXE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLM-------- 174
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + K+ DFG A ++ + GT Y++PE S G N
Sbjct: 175 IDQQGYI-KVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 219
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 161
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAE--------PVDVWSCGIVLTAMLAGELPW 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 32/165 (19%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMS 444
+H DL N L N+ V K+ DFG++ L+DD + + T G + + +
Sbjct: 138 VHRDLAARNILVNSNL---------VCKVSDFGMSRVLEDDPEAAYT-TRGGKIPIRWTA 187
Query: 445 PEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHK 502
PEA YR T SDVWS G +++ M YG PY + N
Sbjct: 188 PEAI----------AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--------DVI 229
Query: 503 DQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
IE +L + P L Q M C QK+ RP G V ++
Sbjct: 230 KAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 274
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 26/153 (16%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
IH D+ N L G+V KI DFG+A + +D + K A + +M+PE
Sbjct: 182 IHRDVAARNVLLTN---------GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 232
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQI 505
+ T +SDVWS G +L+ + G PY I L ++ +
Sbjct: 233 SIFDCV---------YTVQSDVWSYGILLWEIFSLGLNPYPGI-------LVNSKFYKLV 276
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
+ Q+A P + M+ C +P RPT
Sbjct: 277 KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 309
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 32/165 (19%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMS 444
+H DL N L N+ V K+ DFG++ L+DD + + T G + + +
Sbjct: 153 VHRDLAARNILVNSNL---------VCKVSDFGMSRVLEDDPEAAYT-TRGGKIPIRWTA 202
Query: 445 PEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHK 502
PEA YR T SDVWS G +++ M YG PY + N
Sbjct: 203 PEAI----------AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--------DVI 244
Query: 503 DQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
IE +L + P L Q M C QK+ RP G V ++
Sbjct: 245 KAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 289
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 31/194 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ N ++++ M ++ A++ + IH +L N L N
Sbjct: 341 NLLDYLRECNRQEV--NAVVLLYMA-TQISSAMEYLEKKNFIHRNLAARNCLVGEN---- 393
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 394 -----HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN---------KFSIK 438
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 439 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 490
Query: 525 MKLCLQKDPKARPT 538
M+ C Q +P RP+
Sbjct: 491 MRACWQWNPSDRPS 504
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 26/153 (16%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
IH D+ N L G+V KI DFG+A + +D + K A + +M+PE
Sbjct: 186 IHRDVAARNVLLTN---------GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 236
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQI 505
+ T +SDVWS G +L+ + G PY I L ++ +
Sbjct: 237 SIFDCV---------YTVQSDVWSYGILLWEIFSLGLNPYPGI-------LVNSKFYKLV 280
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
+ Q+A P + M+ C +P RPT
Sbjct: 281 KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 313
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 42/262 (16%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A+K V+ S + I +LNE ++ C +V+++ V L V+
Sbjct: 49 VAVKTVNESASLRERI--EFLNEASVMKGFT-CHHVVRLLGVV-SKGQPTLVVMELMAHG 104
Query: 346 DLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG 400
DL Y+R+L N P T+ +I E+ + ++A +H DL N +
Sbjct: 105 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH 164
Query: 401 NVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGN 458
+ +KI DFG+ + + T ++ G L +M+PE+
Sbjct: 165 DF---------TVKIGDFGMTRDIYE--TDYYRKGGKGLLPVRWMAPESLKDGV------ 207
Query: 459 TYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWA-KMLAIARHKDQIEFKPQLANNVT 516
T SD+WS G +L+ + PY + N K + + DQ + P+ ++
Sbjct: 208 ---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL- 263
Query: 517 IPPTLLQSMKLCLQKDPKARPT 538
M++C Q +PK RPT
Sbjct: 264 --------MRMCWQFNPKMRPT 277
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 26/153 (16%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
IH D+ N L G+V KI DFG+A + +D + K A + +M+PE
Sbjct: 186 IHRDVAARNVLLTN---------GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 236
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQI 505
+ T +SDVWS G +L+ + G PY I L ++ +
Sbjct: 237 SIFDCV---------YTVQSDVWSYGILLWEIFSLGLNPYPGI-------LVNSKFYKLV 280
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
+ Q+A P + M+ C +P RPT
Sbjct: 281 KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 313
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 37/202 (18%)
Query: 300 SIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMRNLNKM- 357
+I + + E+++L + PY++ + Y + + ME D L + ++ ++
Sbjct: 73 AIRNQIIRELQVLHECN-SPYIVGFYGAFYSDG--EISICMEHMDGGSLDQVLKKAGRIP 129
Query: 358 -TTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
L I +I + L ++E H I+H D+KP+N L ++ G + K+
Sbjct: 130 EQILGKVSIAVI----KGLTYLREKHK--IMHRDVKPSNIL--------VNSRGEI-KLC 174
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG++ L D ++ GT +YMSPE T S +SD+WS+G L
Sbjct: 175 DFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYS---------VQSDIWSMGLSLV 221
Query: 477 NMIYGRTPYSHIPNTWAKMLAI 498
M GR P IP AK L +
Sbjct: 222 EMAVGRYP---IPPPDAKELEL 240
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
++++ V +H GI H D+KP N L +D N LKI DFG+A + +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLL--------LDERDN-LKISDFGLATVFRYNNRER 162
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+ GTL Y++PE + DVWS G +L M+ G P+
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAE--------PVDVWSCGIVLTAMLAGELPW 208
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 39/252 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYD---TASKHLYVLME--KGDTDLSKYMRNLNKMTTLP 361
EVEL + CP+++++ D VY+ K L ++ME G S+ ++ T
Sbjct: 57 REVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 115
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I+ + A++ +H+ I H D+KP N L+ I LK+ DFG A
Sbjct: 116 EASEIM----KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI------LKLTDFGFA 165
Query: 422 CSLQDDKTSVHKDTASG--TLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI 479
+T+ H T Y++PE G D+WSLG I+Y ++
Sbjct: 166 -----KETTSHNSLTEPCYTPYYVAPEVLGPEKYDKS---------CDMWSLGVIMYILL 211
Query: 480 YGRTP-YSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
G P YS+ + + Q EF + V+ + +K+ ++ K PT
Sbjct: 212 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS------EEVKMLIRNLLKTEPT 265
Query: 539 VGNSVTQINNNP 550
++T+ N+P
Sbjct: 266 QRMTITEFMNHP 277
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 72/172 (41%), Gaps = 35/172 (20%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGT---LNYM 443
+H L N L N+ V K+ DFG++ L+DD + +A G + +
Sbjct: 131 VHRALAARNILVNSNL---------VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 181
Query: 444 SPEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARH 501
+PEA YR T SDVWS G +++ M YG PY + N
Sbjct: 182 APEAI----------QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--------DV 223
Query: 502 KDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVG---NSVTQINNNP 550
+ IE +L + P L Q M C QKD RP G N++ ++ NP
Sbjct: 224 INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP 275
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVPGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFXE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 30/195 (15%)
Query: 293 LSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTA---SKHLYVLMEKGDTDLSK 349
+S Q+ L E+++L + + +I ++D + K +Y++ DL K
Sbjct: 76 ISPFEHQTYCQRTLREIKILLRFRH-ENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYK 134
Query: 350 YMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCI 409
L K L N I + Y++L +K IH+A ++H DLKP+N L
Sbjct: 135 ----LLKTQHLSNDHICYFL--YQILRGLKYIHSANVLHRDLKPSNLLLNTT-------- 180
Query: 410 GNVLKIIDFGIA--CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSD 467
LKI DFG+A D T + + T Y +PE +S G T D
Sbjct: 181 -XDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEI--MLNSKG------YTKSID 230
Query: 468 VWSLGCILYNMIYGR 482
+WS+GCIL M+ R
Sbjct: 231 IWSVGCILAEMLSNR 245
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 32/165 (19%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMS 444
+H DL N L N+ V K+ DFG++ L+DD + + T G + + +
Sbjct: 132 VHRDLAARNILVNSNL---------VCKVSDFGMSRVLEDDPEAAYT-TRGGKIPIRWTA 181
Query: 445 PEAAGQTSSSGGGNTYR-ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHK 502
PEA YR T SDVWS G +++ M YG PY + N
Sbjct: 182 PEAI----------AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--------DVI 223
Query: 503 DQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
IE +L + P L Q M C QK+ RP G V ++
Sbjct: 224 KAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 268
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVPGG 127
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 128 EMFSHLRRIGRFXE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 174
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 175 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 219
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 42/262 (16%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A+K V+ S + I +LNE ++ C +V+++ V L V+
Sbjct: 50 VAVKTVNESASLRERI--EFLNEASVMKGFT-CHHVVRLLGVV-SKGQPTLVVMELMAHG 105
Query: 346 DLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG 400
DL Y+R+L N P T+ +I E+ + ++A +H DL N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH 165
Query: 401 NVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGN 458
+ +KI DFG+ + + T ++ G L +M+PE+
Sbjct: 166 DF---------TVKIGDFGMTRDIYE--TDYYRKGGKGLLPVRWMAPESLKDGV------ 208
Query: 459 TYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWA-KMLAIARHKDQIEFKPQLANNVT 516
T SD+WS G +L+ + PY + N K + + DQ + P+ ++
Sbjct: 209 ---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL- 264
Query: 517 IPPTLLQSMKLCLQKDPKARPT 538
M++C Q +PK RPT
Sbjct: 265 --------MRMCWQFNPKMRPT 278
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ + ++++ ++ A++ + IH DL N L N
Sbjct: 100 NLLDYLRECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 152
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 153 -----HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN---------KFSIK 197
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 198 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 249
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 250 MRACWQWNPSDRPSFAE 266
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 26/153 (16%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
IH D+ N L G+V KI DFG+A + +D + K A + +M+PE
Sbjct: 174 IHRDVAARNVLLTN---------GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 224
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQI 505
+ T +SDVWS G +L+ + G PY I L ++ +
Sbjct: 225 SIFDCV---------YTVQSDVWSYGILLWEIFSLGLNPYPGI-------LVNSKFYKLV 268
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
+ Q+A P + M+ C +P RPT
Sbjct: 269 KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 301
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 26/153 (16%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
IH D+ N L G+V KI DFG+A + +D + K A + +M+PE
Sbjct: 180 IHRDVAARNVLLTN---------GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 230
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQI 505
+ T +SDVWS G +L+ + G PY I L ++ +
Sbjct: 231 SIFDCV---------YTVQSDVWSYGILLWEIFSLGLNPYPGI-------LVNSKFYKLV 274
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
+ Q+A P + M+ C +P RPT
Sbjct: 275 KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 307
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVPGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFXE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 63 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVPGG 119
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 120 EMFSHLRRIGRFXE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 166
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++PE S G N
Sbjct: 167 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAPEII----LSKGYNK-----A 211
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 212 VDWWALGVLIYEMAAGYPPF 231
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 28/181 (15%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT-DLSKYMRNLNKMTTLPNTMI 365
NE+ LL L P +IK+ D D K+ Y++ E + +L + + N +K I
Sbjct: 95 NEISLLKSLDH-PNIIKLFDVFED--KKYFYLVTEFYEGGELFEQIINRHKFDECDAANI 151
Query: 366 IIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQ 425
+ ++L + +H I+H D+KP N L L+ + + N+ KI+DFG++
Sbjct: 152 M-----KQILSGICYLHKHNIVHRDIKPENIL-----LENKNSLLNI-KIVDFGLSSFFS 200
Query: 426 DDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
D + GT Y++PE + + K DVWS G I+Y ++ G P+
Sbjct: 201 KDYKLRDR---LGTAYYIAPEVLKKKYNE----------KCDVWSCGVIMYILLCGYPPF 247
Query: 486 S 486
Sbjct: 248 G 248
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ + ++++ ++ A++ + IH DL N L N
Sbjct: 95 NLLDYLRECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 147
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 148 -----HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN---------KFSIK 192
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 193 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 244
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 245 MRACWQWNPSDRPSFAE 261
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 113/271 (41%), Gaps = 61/271 (22%)
Query: 280 EHEFKPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHL--- 336
+H K +A+K +DL Q + NEV ++ HD V D S +L
Sbjct: 67 KHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYH--------HDNVVDMYSSYLVGD 115
Query: 337 --YVLME----KGDTDLSKYMR-NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHS 389
+V+ME TD+ + R N ++ T+ +L A+ +H G+IH
Sbjct: 116 ELWVVMEFLEGGALTDIVTHTRMNEEQIATV----------CLSVLRALSYLHNQGVIHR 165
Query: 390 DLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAG 449
D+K + L + +K+ DFG C+ Q K + GT +M+PE
Sbjct: 166 DIKSDSILLTSD---------GRIKLSDFGF-CA-QVSKEVPKRKXLVGTPYWMAPEVIS 214
Query: 450 QTSSSGGGNTYRITYKS--DVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEF 507
R+ Y + D+WSLG ++ MI G PY + P + A+ R +D +
Sbjct: 215 -----------RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP----PLQAMRRIRDSL-- 257
Query: 508 KPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
P++ + + L + L L ++P R T
Sbjct: 258 PPRVKDLHKVSSVLRGFLDLMLVREPSQRAT 288
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ + ++++ ++ A++ + IH DL N L N
Sbjct: 95 NLLDYLRECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 147
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 148 -----HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN---------KFSIK 192
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 193 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 244
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 245 MRACWQWNPSDRPSFAE 261
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 106/262 (40%), Gaps = 42/262 (16%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A+K V+ S + I +LNE ++ C +V+++ V L V+
Sbjct: 50 VAVKTVNESASLRERI--EFLNEASVMKGFT-CHHVVRLLGVV-SKGQPTLVVMELMAHG 105
Query: 346 DLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG 400
DL Y+R+L N P T+ +I E+ + ++A +H DL N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH 165
Query: 401 NVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGN 458
+ +KI DFG+ + + T + G L +M+PE+
Sbjct: 166 DF---------TVKIGDFGMTRDIXE--TDXXRKGGKGLLPVRWMAPESLKDGV------ 208
Query: 459 TYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWA-KMLAIARHKDQIEFKPQLANNVT 516
T SD+WS G +L+ + PY + N K + + DQ + P+ ++
Sbjct: 209 ---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL- 264
Query: 517 IPPTLLQSMKLCLQKDPKARPT 538
M++C Q +PK RPT
Sbjct: 265 --------MRMCWQFNPKMRPT 278
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 32/204 (15%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K +A+K++D + + S+ + EV ++ K+ P ++K+ + + K LY++ME
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLF-REVRIM-KVLNHPNIVKLFEVI--ETEKTLYLVMEYA 95
Query: 344 DT-DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++ Y+ +M + +++ AV+ H I+H DLK N L
Sbjct: 96 SGGEVFDYLVAHGRMKEKEARA-----KFRQIVSAVQYCHQKFIVHRDLKAENLL----- 145
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHK-DTASGTLNYMSPEAAGQTSSSGGGNTYR 461
+D N+ KI DFG + ++ T +K D G Y +PE G
Sbjct: 146 ---LDADMNI-KIADFGFS----NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP----- 192
Query: 462 ITYKSDVWSLGCILYNMIYGRTPY 485
+ DVWSLG ILY ++ G P+
Sbjct: 193 ---EVDVWSLGVILYTLVSGSLPF 213
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ + ++++ ++ A++ + IH DL N L N
Sbjct: 95 NLLDYLRECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 147
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 148 -----HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN---------KFSIK 192
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 193 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 244
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 245 MRACWQWNPSDRPSFAE 261
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 42/192 (21%)
Query: 366 IIIMHWYEMLL-AVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSL 424
++ + +E + V IH+ +I+ DLKP+N V +KI DFG+ SL
Sbjct: 122 VLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDT---------KQVKIGDFGLVTSL 172
Query: 425 QDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTP 484
++D + + GTL YMSPE Q SS G + D+++LG IL ++
Sbjct: 173 KNDGK---RXRSKGTLRYMSPE---QISSQDYGK------EVDLYALGLILAELL----- 215
Query: 485 YSHIPNTWAKMLAIARHKDQIEFKPQLANNV--TIPPTLLQSMKLCLQKDPKARPT---V 539
H+ +T A K + + + +++ TLLQ + L K P+ RP +
Sbjct: 216 --HVCDT-----AFETSKFFTDLRDGIISDIFDKKEKTLLQKL---LSKKPEDRPNTSEI 265
Query: 540 GNSVTQINNNPE 551
++T +PE
Sbjct: 266 LRTLTVWKKSPE 277
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 110/251 (43%), Gaps = 43/251 (17%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYM-RNLNKMTTLP 361
+ +++E ++ L P+++K+ + + + + L G+ L Y+ RN N + L
Sbjct: 70 EKFMSEAVIMKNLDH-PHIVKLIGIIEEEPTWIIMELYPYGE--LGHYLERNKNSLKVL- 125
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
++++ ++ A+ + + +H D+ N L +C+ K+ DFG++
Sbjct: 126 ----TLVLYSLQICKAMAYLESINCVHRDIAVRNILVASP-----ECV----KLGDFGLS 172
Query: 422 CSLQDD---KTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNM 478
++D+ K SV + + +MSPE+ N R T SDVW ++ +
Sbjct: 173 RYIEDEDYYKASVTR----LPIKWMSPESI---------NFRRFTTASDVWMFAVCMWEI 219
Query: 479 I-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
+ +G+ P+ + N ++ + D++ KP L PP L M C DP RP
Sbjct: 220 LSFGKQPFFWLEN--KDVIGVLEKGDRLP-KPDLC-----PPVLYTLMTRCWDYDPSDRP 271
Query: 538 TVGNSVTQINN 548
V +++
Sbjct: 272 RFTELVCSLSD 282
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG-DT 345
A+K++D + + LNE + + + P+++K+ D ++ LY+++E
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNE-KRIQQAVNFPFLVKLEFSFKDNSN--LYMVLEYAPGG 127
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 128 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 174
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + K+ DFG A ++ + GT Y++PE S G N
Sbjct: 175 IDQQGYI-KVADFGFAKRVKGRTWXL-----CGTPEYLAPE----IILSKGYNK-----A 219
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ + ++++ ++ A++ + IH DL N L N
Sbjct: 95 NLLDYLRECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 147
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 148 -----HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN---------KFSIK 192
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 193 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 244
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 245 MRACWQWNPSDRPSFAE 261
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT Y++P S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEYLAP----AIILSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 30/207 (14%)
Query: 285 PLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGD 344
P+A+KV L + T L+E ++A + G PYV ++ + + + LM G
Sbjct: 48 PVAIKV--LRENTSPKANKEILDEAYVMAGV-GSPYVSRLLGICLTSTVQLVTQLMPYG- 103
Query: 345 TDLSKYMRNLNKMTTLPNTMIIIIMHW-YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
L N ++ + +++W ++ + + ++H DL N L
Sbjct: 104 CLLDHVRENRGRLGSQD------LLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSP-- 155
Query: 404 KIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRIT 463
N +KI DFG+A L D+T H D + +M+ E+ + R T
Sbjct: 156 -------NHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR---------RFT 199
Query: 464 YKSDVWSLGCILYN-MIYGRTPYSHIP 489
++SDVWS G ++ M +G PY IP
Sbjct: 200 HQSDVWSYGVTVWELMTFGAKPYDGIP 226
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 106/262 (40%), Gaps = 42/262 (16%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A+K V+ S + I +LNE ++ C +V+++ V L V+
Sbjct: 47 VAVKTVNESASLRERI--EFLNEASVMKGFT-CHHVVRLLGVV-SKGQPTLVVMELMAHG 102
Query: 346 DLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG 400
DL Y+R+L N P T+ +I E+ + ++A +H DL N +
Sbjct: 103 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH 162
Query: 401 NVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGN 458
+ +KI DFG+ + + T + G L +M+PE+
Sbjct: 163 DF---------TVKIGDFGMTRDIXE--TDXXRKGGKGLLPVRWMAPESLKDGV------ 205
Query: 459 TYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWA-KMLAIARHKDQIEFKPQLANNVT 516
T SD+WS G +L+ + PY + N K + + DQ + P+ ++
Sbjct: 206 ---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL- 261
Query: 517 IPPTLLQSMKLCLQKDPKARPT 538
M++C Q +PK RPT
Sbjct: 262 --------MRMCWQFNPKMRPT 275
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
ALK + L D+ I + + E+ +L +L+ ++K++D ++ K L ++ E D
Sbjct: 29 FALKKIRLEK-EDEGIPSTTIREISILKELKHSN-IVKLYDVIH--TKKRLVLVFEHLDQ 84
Query: 346 DLSKYM----RNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGN 401
DL K + L +T + ++L + H ++H DLKP N L
Sbjct: 85 DLKKLLDVCEGGLESVTAKSFLL--------QLLNGIAYCHDRRVLHRDLKPQNLL---- 132
Query: 402 VLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASG-TLNYMSPEAAGQTSSSGGGNTY 460
I+ G LKI DFG+A + V K T TL Y +P+ G Y
Sbjct: 133 ----INREGE-LKIADFGLARAFG---IPVRKYTHEVVTLWYRAPDVLM------GSKKY 178
Query: 461 RITYKSDVWSLGCILYNMIYGRTP 484
T D+WS+GCI M+ G TP
Sbjct: 179 STTI--DIWSVGCIFAEMVNG-TP 199
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 37/201 (18%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
ALK + L D+ I + + E+ +L +L+ ++K++D ++ K L ++ E D
Sbjct: 29 FALKKIRLEK-EDEGIPSTTIREISILKELKHSN-IVKLYDVIH--TKKRLVLVFEHLDQ 84
Query: 346 DLSKYM----RNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGN 401
DL K + L +T + ++L + H ++H DLKP N L
Sbjct: 85 DLKKLLDVCEGGLESVTAKSFLL--------QLLNGIAYCHDRRVLHRDLKPQNLL---- 132
Query: 402 VLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASG-TLNYMSPEAAGQTSSSGGGNTY 460
I+ G LKI DFG+A + V K T TL Y +P+ G Y
Sbjct: 133 ----INREGE-LKIADFGLARAFG---IPVRKYTHEVVTLWYRAPDVLM------GSKKY 178
Query: 461 RITYKSDVWSLGCILYNMIYG 481
T D+WS+GCI M+ G
Sbjct: 179 STTI--DIWSVGCIFAEMVNG 197
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 41/242 (16%)
Query: 300 SIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMRNLNKM- 357
+I + + E+++L + PY++ + Y + + ME D L + ++ ++
Sbjct: 65 AIRNQIIRELQVLHECN-SPYIVGFYGAFYSDG--EISICMEHMDGGSLDQVLKKAGRIP 121
Query: 358 -TTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
L I +I + L ++E H I+H D+KP+N L ++ G + K+
Sbjct: 122 EQILGKVSIAVI----KGLTYLREKHK--IMHRDVKPSNIL--------VNSRGEI-KLC 166
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG++ L D ++ GT +YMSPE T S +SD+WS+G L
Sbjct: 167 DFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYS---------VQSDIWSMGLSLV 213
Query: 477 NMIYGRTPYSHIPNTWAKMLAIARHKDQI--EFKPQLANNVTIPPTLLQSMKLCLQKDPK 534
M GR P + + +AI D I E P+L + V + CL K+P
Sbjct: 214 EMAVGRYPI----GSGSGSMAIFELLDYIVNEPPPKLPSGV-FSLEFQDFVNKCLIKNPA 268
Query: 535 AR 536
R
Sbjct: 269 ER 270
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
ALK + L D+ I + + E+ +L +L+ ++K++D ++ K L ++ E D
Sbjct: 29 FALKKIRLEK-EDEGIPSTTIREISILKELKHSN-IVKLYDVIH--TKKRLVLVFEHLDQ 84
Query: 346 DLSKYM----RNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGN 401
DL K + L +T + ++L + H ++H DLKP N L
Sbjct: 85 DLKKLLDVCEGGLESVTAKSFLL--------QLLNGIAYCHDRRVLHRDLKPQNLL---- 132
Query: 402 VLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTAS-GTLNYMSPEAAGQTSSSGGGNTY 460
I+ G LKI DFG+A + V K T TL Y +P+ G Y
Sbjct: 133 ----INREGE-LKIADFGLARAFG---IPVRKYTHEIVTLWYRAPDVLM------GSKKY 178
Query: 461 RITYKSDVWSLGCILYNMIYGRTP 484
T D+WS+GCI M+ G TP
Sbjct: 179 STTI--DIWSVGCIFAEMVNG-TP 199
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 110/251 (43%), Gaps = 43/251 (17%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYM-RNLNKMTTLP 361
+ +++E ++ L P+++K+ + + + + L G+ L Y+ RN N + L
Sbjct: 58 EKFMSEAVIMKNLDH-PHIVKLIGIIEEEPTWIIMELYPYGE--LGHYLERNKNSLKVL- 113
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
++++ ++ A+ + + +H D+ N L +C+ K+ DFG++
Sbjct: 114 ----TLVLYSLQICKAMAYLESINCVHRDIAVRNILVASP-----ECV----KLGDFGLS 160
Query: 422 CSLQDD---KTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNM 478
++D+ K SV + + +MSPE+ N R T SDVW ++ +
Sbjct: 161 RYIEDEDYYKASVTR----LPIKWMSPESI---------NFRRFTTASDVWMFAVCMWEI 207
Query: 479 I-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
+ +G+ P+ + N ++ + D++ KP L PP L M C DP RP
Sbjct: 208 LSFGKQPFFWLEN--KDVIGVLEKGDRLP-KPDLC-----PPVLYTLMTRCWDYDPSDRP 259
Query: 538 TVGNSVTQINN 548
V +++
Sbjct: 260 RFTELVCSLSD 270
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 85/196 (43%), Gaps = 31/196 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ + ++++ ++ A++ + IH +L N L N
Sbjct: 302 NLLDYLRECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGEN---- 354
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D + H A + + +PE+ + + K
Sbjct: 355 -----HLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN---------KFSIK 399
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 400 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 451
Query: 525 MKLCLQKDPKARPTVG 540
M+ C Q +P RP+
Sbjct: 452 MRACWQWNPSDRPSFA 467
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 110/251 (43%), Gaps = 43/251 (17%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYM-RNLNKMTTLP 361
+ +++E ++ L P+++K+ + + + + L G+ L Y+ RN N + L
Sbjct: 54 EKFMSEAVIMKNLDH-PHIVKLIGIIEEEPTWIIMELYPYGE--LGHYLERNKNSLKVL- 109
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
++++ ++ A+ + + +H D+ N L +C+ K+ DFG++
Sbjct: 110 ----TLVLYSLQICKAMAYLESINCVHRDIAVRNILVASP-----ECV----KLGDFGLS 156
Query: 422 CSLQDD---KTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNM 478
++D+ K SV + + +MSPE+ N R T SDVW ++ +
Sbjct: 157 RYIEDEDYYKASVTR----LPIKWMSPESI---------NFRRFTTASDVWMFAVCMWEI 203
Query: 479 I-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
+ +G+ P+ + N ++ + D++ KP L PP L M C DP RP
Sbjct: 204 LSFGKQPFFWLEN--KDVIGVLEKGDRLP-KPDLC-----PPVLYTLMTRCWDYDPSDRP 255
Query: 538 TVGNSVTQINN 548
V +++
Sbjct: 256 RFTELVCSLSD 266
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 32/204 (15%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K +A++++D + + S+ + EV ++ K+ P ++K+ + + K LY++ME
Sbjct: 40 KEVAVRIIDKTQLNSSSLQKLF-REVRIM-KVLNHPNIVKLFEVI--ETEKTLYLVMEYA 95
Query: 344 DT-DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++ Y+ +M + +++ AV+ H I+H DLK N L
Sbjct: 96 SGGEVFDYLVAHGRMKEKEARA-----KFRQIVSAVQYCHQKFIVHRDLKAENLL----- 145
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHK-DTASGTLNYMSPEAAGQTSSSGGGNTYR 461
+D N+ KI DFG + ++ T +K D G+ Y +PE G
Sbjct: 146 ---LDADMNI-KIADFGFS----NEFTFGNKLDEFCGSPPYAAPELFQGKKYDGP----- 192
Query: 462 ITYKSDVWSLGCILYNMIYGRTPY 485
+ DVWSLG ILY ++ G P+
Sbjct: 193 ---EVDVWSLGVILYTLVSGSLPF 213
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 24/124 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVG-------NVLKIID---CIGNVLKIIDFGIA 421
+++ AVK +H + H+DLKP N LFV N+ K D ++++DFG A
Sbjct: 144 FQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA 203
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
+ H T T +Y +PE + S DVWS+GCI++ G
Sbjct: 204 TFDHE-----HHSTIVSTRHYRAPEVILELGWSQ---------PCDVWSIGCIIFEYYVG 249
Query: 482 RTPY 485
T +
Sbjct: 250 FTLF 253
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 32/204 (15%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K +A+K++D + + S+ + EV ++ K+ P ++K+ + + K LY++ME
Sbjct: 33 KEVAVKIIDKTQLNSSSLQKLF-REVRIM-KVLNHPNIVKLFEVI--ETEKTLYLVMEYA 88
Query: 344 DT-DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++ Y+ M + +++ AV+ H I+H DLK N L
Sbjct: 89 SGGEVFDYLVAHGWMKEKEARA-----KFRQIVSAVQYCHQKFIVHRDLKAENLL----- 138
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHK-DTASGTLNYMSPEAAGQTSSSGGGNTYR 461
+D N+ KI DFG + ++ T +K DT G+ Y +PE G
Sbjct: 139 ---LDADMNI-KIADFGFS----NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP----- 185
Query: 462 ITYKSDVWSLGCILYNMIYGRTPY 485
+ DVWSLG ILY ++ G P+
Sbjct: 186 ---EVDVWSLGVILYTLVSGSLPF 206
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 37/202 (18%)
Query: 300 SIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMRNLNKM- 357
+I + + E+++L + PY++ + Y + + + ME D L + ++ ++
Sbjct: 46 AIRNQIIRELQVLHECNS-PYIVGFYGAFY--SDGEISICMEHMDGGSLDQVLKKAGRIP 102
Query: 358 -TTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
L I +I + L ++E H I+H D+KP+N L ++ G + K+
Sbjct: 103 EQILGKVSIAVI----KGLTYLREKHK--IMHRDVKPSNIL--------VNSRGEI-KLC 147
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG++ L D ++ GT +YMSPE T S +SD+WS+G L
Sbjct: 148 DFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYS---------VQSDIWSMGLSLV 194
Query: 477 NMIYGRTPYSHIPNTWAKMLAI 498
M GR P IP AK L +
Sbjct: 195 EMAVGRYP---IPPPDAKELEL 213
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 37/202 (18%)
Query: 300 SIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMRNLNKM- 357
+I + + E+++L + PY++ + Y + + + ME D L + ++ ++
Sbjct: 46 AIRNQIIRELQVLHECNS-PYIVGFYGAFY--SDGEISICMEHMDGGSLDQVLKKAGRIP 102
Query: 358 -TTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
L I +I + L ++E H I+H D+KP+N L ++ G + K+
Sbjct: 103 EQILGKVSIAVI----KGLTYLREKHK--IMHRDVKPSNIL--------VNSRGEI-KLC 147
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG++ L D ++ GT +YMSPE T S +SD+WS+G L
Sbjct: 148 DFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYS---------VQSDIWSMGLSLV 194
Query: 477 NMIYGRTPYSHIPNTWAKMLAI 498
M GR P IP AK L +
Sbjct: 195 EMAVGRYP---IPPPDAKELEL 213
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 34/188 (18%)
Query: 300 SIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMRNLNKM- 357
+I + + E+++L + PY++ + Y + + ME D L + ++ ++
Sbjct: 46 AIRNQIIRELQVLHECNS-PYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIP 102
Query: 358 -TTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
L I +I + L ++E H I+H D+KP+N L ++ G + K+
Sbjct: 103 EQILGKVSIAVI----KGLTYLREKHK--IMHRDVKPSNIL--------VNSRGEI-KLC 147
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG++ L D ++ GT +YMSPE T S +SD+WS+G L
Sbjct: 148 DFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYS---------VQSDIWSMGLSLV 194
Query: 477 NMIYGRTP 484
M GR P
Sbjct: 195 EMAVGRYP 202
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 20/119 (16%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
+++ AV + IIH D+K N + + +K+IDFG A L+ K
Sbjct: 138 QLVSAVGYLRLKDIIHRDIKDENIVIAEDF---------TIKLIDFGSAAYLERGKLFY- 187
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
T GT+ Y +PE GN YR + ++WSLG LY +++ P+ + T
Sbjct: 188 --TFCGTIEYCAPEVLM-------GNPYR-GPELEMWSLGVTLYTLVFEENPFCELEET 236
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 34/188 (18%)
Query: 300 SIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMRNLNKM- 357
+I + + E+++L + PY++ + Y + + ME D L + ++ ++
Sbjct: 49 AIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIP 105
Query: 358 -TTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
L I +I + L ++E H I+H D+KP+N L ++ G + K+
Sbjct: 106 EQILGKVSIAVI----KGLTYLREKHK--IMHRDVKPSNIL--------VNSRGEI-KLC 150
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG++ L D+ + GT +YMSPE T S +SD+WS+G L
Sbjct: 151 DFGVSGQLIDEMA----NEFVGTRSYMSPERLQGTHYS---------VQSDIWSMGLSLV 197
Query: 477 NMIYGRTP 484
M GR P
Sbjct: 198 EMAVGRYP 205
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 30/203 (14%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
+ +A+K++D + + S+ + EV ++ K+ P ++K+ + + K LY++ME
Sbjct: 41 REVAIKIIDKTQLNPTSLQKLF-REVRIM-KILNHPNIVKLFEVI--ETEKTLYLIMEYA 96
Query: 344 DT-DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++ Y+ +M + +++ AV+ H I+H DLK N L
Sbjct: 97 SGGEVFDYLVAHGRMKEKEARS-----KFRQIVSAVQYCHQKRIVHRDLKAENLL----- 146
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI 462
+D N+ KI DFG + D G Y +PE G
Sbjct: 147 ---LDADMNI-KIADFGFSNEFT---VGGKLDAFCGAPPYAAPELFQGKKYDGP------ 193
Query: 463 TYKSDVWSLGCILYNMIYGRTPY 485
+ DVWSLG ILY ++ G P+
Sbjct: 194 --EVDVWSLGVILYTLVSGSLPF 214
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 41/242 (16%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
EV +L +++ P +I +HD +++ + + +L +L ++ +T T +
Sbjct: 65 EVNILREIR-HPNIITLHD-IFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFL- 121
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV----LKIIDFGIACS 423
++L V +H+ I H DLKP N + + NV +K+IDFGIA
Sbjct: 122 ----KQILDGVHYLHSKRIAHFDLKPENIMLLDK---------NVPNPRIKLIDFGIAHK 168
Query: 424 LQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRT 483
++ GT +++PE N + ++D+WS+G I Y ++ G +
Sbjct: 169 IE---AGNEFKNIFGTPEFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 216
Query: 484 PY--SHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
P+ T + A+ D+ F +N + ++ + L KDPK R +
Sbjct: 217 PFLGETKQETLTNISAVNYDFDEEYF----SNTSELAKDFIRRL---LVKDPKRRMXIAQ 269
Query: 542 SV 543
S+
Sbjct: 270 SL 271
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 41/242 (16%)
Query: 308 EVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIII 367
EV +L +++ P +I +HD +++ + + +L +L ++ +T T +
Sbjct: 79 EVNILREIR-HPNIITLHD-IFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFL- 135
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNV----LKIIDFGIACS 423
++L V +H+ I H DLKP N + + NV +K+IDFGIA
Sbjct: 136 ----KQILDGVHYLHSKRIAHFDLKPENIMLLDK---------NVPNPRIKLIDFGIAHK 182
Query: 424 LQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRT 483
++ GT +++PE N + ++D+WS+G I Y ++ G +
Sbjct: 183 IE---AGNEFKNIFGTPEFVAPEIV---------NYEPLGLEADMWSIGVITYILLSGAS 230
Query: 484 PY--SHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
P+ T + A+ D+ F +N + ++ + L KDPK R +
Sbjct: 231 PFLGETKQETLTNISAVNYDFDEEYF----SNTSELAKDFIRRL---LVKDPKRRMXIAQ 283
Query: 542 SV 543
S+
Sbjct: 284 SL 285
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Query: 296 ITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASK-----HLYVLMEKGDTDLSKY 350
I D + L ++ LA L P ++++ Y Y + +L V+ME L +
Sbjct: 57 IQDPRFRNRELQIMQDLAVLHH-PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRC 115
Query: 351 MRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIH--AAGIIHSDLKPANFLFVGNVLKIIDC 408
RN + P ++I + ++++ ++ +H + + H D+KP N L ++
Sbjct: 116 CRNYYRRQVAPPPILIKVF-LFQLIRSIGCLHLPSVNVCHRDIKPHNVL--------VNE 166
Query: 409 IGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDV 468
LK+ DFG A L + +V + Y +PE GN + T D+
Sbjct: 167 ADGTLKLCDFGSAKKLSPSEPNV---AYICSRYYRAPELIF-------GNQHYTT-AVDI 215
Query: 469 WSLGCILYNMIYGRTPYSHIPNTWAKMLAIAR 500
WS+GCI M+ G P N+ ++ I R
Sbjct: 216 WSVGCIFAEMMLGE-PIFRGDNSAGQLHEIVR 246
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 45/227 (19%)
Query: 336 LYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEML-------LAVKEIHAAGIIH 388
+Y ME G+ Y +L M+ M W + L + +H IIH
Sbjct: 113 IYKYMENGNLKRHLYGSDLPTMS----------MSWEQRLEICIGAARGLHYLHTRAIIH 162
Query: 389 SDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAA 448
D+K N L N V KI DFGI+ + + GTL Y+ PE
Sbjct: 163 RDVKSINILLDENF---------VPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYF 213
Query: 449 GQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSH-IPNTWAKM--LAIARHKD-Q 504
+ R+T KSDV+S G +L+ ++ R+ +P + A+ H + Q
Sbjct: 214 IKG---------RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 505 IE--FKPQLANNVTIPPTLLQ---SMKLCLQKDPKARPTVGNSVTQI 546
+E P LA+ + P +L + + CL + RP++G+ + ++
Sbjct: 265 LEQIVDPNLADKIR-PESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 45/227 (19%)
Query: 336 LYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEML-------LAVKEIHAAGIIH 388
+Y ME G+ Y +L M+ M W + L + +H IIH
Sbjct: 113 IYKYMENGNLKRHLYGSDLPTMS----------MSWEQRLEICIGAARGLHYLHTRAIIH 162
Query: 389 SDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAA 448
D+K N L N V KI DFGI+ + + GTL Y+ PE
Sbjct: 163 RDVKSINILLDENF---------VPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYF 213
Query: 449 GQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSH-IPNTWAKM--LAIARHKD-Q 504
+ R+T KSDV+S G +L+ ++ R+ +P + A+ H + Q
Sbjct: 214 IKG---------RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 505 IE--FKPQLANNVTIPPTLLQ---SMKLCLQKDPKARPTVGNSVTQI 546
+E P LA+ + P +L + + CL + RP++G+ + ++
Sbjct: 265 LEQIVDPNLADKIR-PESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK-GDT 345
A+K++D + + LNE +L + P+++K+ D ++ LY++ME
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSN--LYMVMEYVAGG 126
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
++ ++R + + + P+ +++L + +H+ +I+ DLKP N L
Sbjct: 127 EMFSHLRRIGRFSE-PHARFYAA----QIVLTFEYLHSLDLIYRDLKPENLL-------- 173
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
ID G + ++ DFG A ++ + GT ++PE S G N
Sbjct: 174 IDQQGYI-QVTDFGFAKRVKGRTWXL-----CGTPEALAPEII----LSKGYNK-----A 218
Query: 466 SDVWSLGCILYNMIYGRTPY 485
D W+LG ++Y M G P+
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 37/202 (18%)
Query: 300 SIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMRNLNKM- 357
+I + + E+++L + PY++ + Y + + + ME D L + ++ ++
Sbjct: 46 AIRNQIIRELQVLHECNS-PYIVGFYGAFY--SDGEISICMEHMDGGSLDQVLKKAGRIP 102
Query: 358 -TTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
L I +I + L ++E H I+H D+KP+N L ++ G + K+
Sbjct: 103 EQILGKVSIAVI----KGLTYLREKHK--IMHRDVKPSNIL--------VNSRGEI-KLC 147
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG++ L D ++ GT +YMSPE T S +SD+WS+G L
Sbjct: 148 DFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYS---------VQSDIWSMGLSLV 194
Query: 477 NMIYGRTPYSHIPNTWAKMLAI 498
M GR P IP AK L +
Sbjct: 195 EMAVGRYP---IPPPDAKELEL 213
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 37/202 (18%)
Query: 300 SIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD-LSKYMRNLNKM- 357
+I + + E+++L + PY++ + Y + + + ME D L + ++ ++
Sbjct: 46 AIRNQIIRELQVLHECNS-PYIVGFYGAFY--SDGEISICMEHMDGGSLDQVLKKAGRIP 102
Query: 358 -TTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII 416
L I +I + L ++E H I+H D+KP+N L ++ G + K+
Sbjct: 103 EQILGKVSIAVI----KGLTYLREKHK--IMHRDVKPSNIL--------VNSRGEI-KLC 147
Query: 417 DFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
DFG++ L D ++ GT +YMSPE T S +SD+WS+G L
Sbjct: 148 DFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYS---------VQSDIWSMGLSLV 194
Query: 477 NMIYGRTPYSHIPNTWAKMLAI 498
M GR P IP AK L +
Sbjct: 195 EMAVGRYP---IPPPDAKELEL 213
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 30/173 (17%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
Y++ ++ + +H DL N L G V+KI DFG+A + D V
Sbjct: 179 YQVAKGMEFLEFKSCVHRDLAARNVLVTH---------GKVVKICDFGLARDIMSDSNYV 229
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIP- 489
+ A + +M+PE+ + Y I KSDVWS G +L+ + G PY IP
Sbjct: 230 VRGNARLPVKWMAPESLFE-------GIYTI--KSDVWSYGILLWEIFSLGVNPYPGIPV 280
Query: 490 -NTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
+ K++ DQ P A + M+ C D + RP+ N
Sbjct: 281 DANFYKLIQNGFKMDQ----PFYATE-----EIYIIMQSCWAFDSRKRPSFPN 324
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 36/177 (20%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
++L A+ IH+ GIIH +LKP N ID NV KI DFG+A ++ +
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIF--------IDESRNV-KIGDFGLAKNVHRSLDILK 174
Query: 433 KD------------TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY 480
D +A GT Y++ E T G N K D +SLG I + IY
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGT---GHYNE-----KIDXYSLGIIFFEXIY 226
Query: 481 GRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
+ N K+ +++ IEF P +N + ++L + DP RP
Sbjct: 227 PFSTGXERVNILKKLRSVS-----IEFPPDFDDNKXKVEK--KIIRLLIDHDPNKRP 276
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 74/202 (36%), Gaps = 67/202 (33%)
Query: 315 LQGCPYVIKMHDYV-----YDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIM 369
+ G Y + +D+V Y L +L ++ +YM NL K
Sbjct: 82 VMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFK------------- 128
Query: 370 HWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKT 429
A+K IH GI+H D+KP+NFL+ + K ++DFG+A D K
Sbjct: 129 -------ALKRIHQFGIVHRDVKPSNFLYNRRLKK--------YALVDFGLAQGTHDTKI 173
Query: 430 SVHKDTAS--------------------------GTLNYMSPEAAGQTSSSGGGNTYRIT 463
+ K S GT + +PE + + T
Sbjct: 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQ--------T 225
Query: 464 YKSDVWSLGCILYNMIYGRTPY 485
D+WS G I +++ GR P+
Sbjct: 226 TAIDMWSAGVIFLSLLSGRYPF 247
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 26/200 (13%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A+K + L ++ + + + EV LL +LQ +I++ ++ HL + E +
Sbjct: 62 VAIKRIRLEH-EEEGVPGTAIREVSLLKELQH-RNIIELKSVIHHNHRLHL--IFEYAEN 117
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
DL KYM ++ M +I Y+++ V H+ +H DLKP N L L +
Sbjct: 118 DLKKYMDKNPDVS-----MRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLL-----LSV 167
Query: 406 IDCIGN-VLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
D VLKI DFG+A + + TL Y PE G Y +
Sbjct: 168 SDASETPVLKIGDFGLARAFGIPIRQFTHEII--TLWYRPPEIL------LGSRHYSTSV 219
Query: 465 KSDVWSLGCILYNMIYGRTP 484
D+WS+ CI M+ +TP
Sbjct: 220 --DIWSIACIWAEMLM-KTP 236
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 75/174 (43%), Gaps = 35/174 (20%)
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDD 427
I + +++ ++ +H II+ DLKP N L +D GNV +I D G+A L+
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVL--------LDDDGNV-RISDLGLAVELKAG 342
Query: 428 KTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSH 487
+T +GT +M+PE G Y + D ++LG LY MI R P+
Sbjct: 343 QTKTK--GYAGTPGFMAPELL-------LGEEY--DFSVDYFALGVTLYEMIAARGPFR- 390
Query: 488 IPNTWAKMLAIARHKDQIEFKPQ-LANNVTIPPTLLQSMK-LC---LQKDPKAR 536
A + E K + L VT P + K C LQKDP+ R
Sbjct: 391 ---------ARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 28/172 (16%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQD--DKTSVHKDTASG 438
+HA IH DL N L + L +KI DFG+A ++ + + V +D S
Sbjct: 150 LHAQHYIHRDLAARNVLLDNDRL---------VKIGDFGLAKAVPEGHEXYRVREDGDSP 200
Query: 439 TLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAI 498
Y +PE + Y+ Y SDVWS G LY ++ P + +++ I
Sbjct: 201 VFWY-APECLKE---------YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGI 250
Query: 499 A-------RHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
A R + +E +L P + MK C + + RPT N +
Sbjct: 251 AQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLI 302
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 75/174 (43%), Gaps = 35/174 (20%)
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDD 427
I + +++ ++ +H II+ DLKP N L +D GNV +I D G+A L+
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVL--------LDDDGNV-RISDLGLAVELKAG 342
Query: 428 KTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSH 487
+T +GT +M+PE G Y + D ++LG LY MI R P+
Sbjct: 343 QTKTK--GYAGTPGFMAPELL-------LGEEY--DFSVDYFALGVTLYEMIAARGPFR- 390
Query: 488 IPNTWAKMLAIARHKDQIEFKPQ-LANNVTIPPTLLQSMK-LC---LQKDPKAR 536
A + E K + L VT P + K C LQKDP+ R
Sbjct: 391 ---------ARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 33/244 (13%)
Query: 300 SIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYM--RNLNKM 357
S AD EV+LL + P VI+ + + + Y+ +E L +Y+ ++ +
Sbjct: 62 SFAD---REVQLLRESDEHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHL 116
Query: 358 TTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKII- 416
P T++ + + +H+ I+H DLKP N L + + + G + +I
Sbjct: 117 GLEPITLL------QQTTSGLAHLHSLNIVHRDLKPHNIL-----ISMPNAHGKIKAMIS 165
Query: 417 DFGIACSLQDDKTSVHKDTA-SGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCIL 475
DFG+ L + S + + GT +++PE + TY D++S GC+
Sbjct: 166 DFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENP------TYTVDIFSAGCVF 219
Query: 476 YNMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPK 534
Y +I G P+ A +L A D + P+ +V I L++ M + DP+
Sbjct: 220 YYVISEGSHPFGKSLQRQANILLGACSLDCLH--PEKHEDV-IARELIEKM---IAMDPQ 273
Query: 535 ARPT 538
RP+
Sbjct: 274 KRPS 277
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ N ++++ M ++ A++ + IH DL N L N
Sbjct: 96 NLLDYLRECNRQEV--NAVVLLYMA-TQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 148
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D T A + + +PE+ + + K
Sbjct: 149 -----HLVKVADFGLSRLMTGD-TYTAPAGAKFPIKWTAPESLAYN---------KFSIK 193
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 194 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 245
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 246 MRACWQWNPSDRPSFAE 262
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 75/174 (43%), Gaps = 35/174 (20%)
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDD 427
I + +++ ++ +H II+ DLKP N L +D GNV +I D G+A L+
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVL--------LDDDGNV-RISDLGLAVELKAG 342
Query: 428 KTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSH 487
+T +GT +M+PE G Y + D ++LG LY MI R P+
Sbjct: 343 QTKTK--GYAGTPGFMAPELL-------LGEEY--DFSVDYFALGVTLYEMIAARGPFR- 390
Query: 488 IPNTWAKMLAIARHKDQIEFKPQ-LANNVTIPPTLLQSMK-LC---LQKDPKAR 536
A + E K + L VT P + K C LQKDP+ R
Sbjct: 391 ---------ARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 373 EMLLAVKEIHA-AGIIHSDLKPANFLFVGNVLKIIDCIGNV--LKIIDFGIACSLQDDKT 429
++LL + +H GIIH+D+KP N L ++I+D N+ +KI D G AC +
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVL-----MEIVDSPENLIQIKIADLGNACWYDE--- 190
Query: 430 SVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
H + T Y SPE G +D+WS C+++ +I G
Sbjct: 191 --HYTNSIQTREYRSPEVLLGAPWGCG---------ADIWSTACLIFELITG 231
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 373 EMLLAVKEIHA-AGIIHSDLKPANFLFVGNVLKIIDCIGNV--LKIIDFGIACSLQDDKT 429
++LL + +H GIIH+D+KP N L ++I+D N+ +KI D G AC +
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVL-----MEIVDSPENLIQIKIADLGNACWYDE--- 190
Query: 430 SVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
H + T Y SPE G +D+WS C+++ +I G
Sbjct: 191 --HYTNSIQTREYRSPEVLLGAPWGCG---------ADIWSTACLIFELITG 231
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
+L Y+R N+ N ++++ M ++ A++ + IH DL N L N
Sbjct: 97 NLLDYLRECNRQEV--NAVVLLYMA-TQISSAMEYLEKKNFIHRDLAARNCLVGEN---- 149
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
+++K+ DFG++ + D T A + + +PE+ + + K
Sbjct: 150 -----HLVKVADFGLSRLMTGD-TYTAPAGAKFPIKWTAPESLAYN---------KFSIK 194
Query: 466 SDVWSLGCILYNM-IYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQS 524
SDVW+ G +L+ + YG +PY I +++ + +E ++ P + +
Sbjct: 195 SDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELLEKDYRMERPEGCPEKVYEL 246
Query: 525 MKLCLQKDPKARPTVGN 541
M+ C Q +P RP+
Sbjct: 247 MRACWQWNPSDRPSFAE 263
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 105/262 (40%), Gaps = 42/262 (16%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A+K V+ S + I +LNE ++ C +V+++ V L V+
Sbjct: 50 VAVKTVNESASLRERI--EFLNEASVMKGFT-CHHVVRLLGVV-SKGQPTLVVMELMAHG 105
Query: 346 DLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG 400
DL Y+R+L N P T+ +I E+ + ++A +H DL N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH 165
Query: 401 NVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGN 458
+ +KI DFG+ + + T + G L +M+PE+
Sbjct: 166 DF---------TVKIGDFGMTRDIXE--TDXXRKGGKGLLPVRWMAPESLKDGV------ 208
Query: 459 TYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWA-KMLAIARHKDQIEFKPQLANNVT 516
T SD+WS G +L+ + PY + N K + + DQ + P+ ++
Sbjct: 209 ---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL- 264
Query: 517 IPPTLLQSMKLCLQKDPKARPT 538
M++C Q +P RPT
Sbjct: 265 --------MRMCWQFNPNMRPT 278
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 45/209 (21%)
Query: 354 LNKMTTLPNTM--IIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGN 411
L+ + PN + ++ + ++++ + H+ IIH D+KP N L +
Sbjct: 111 LDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQS---------G 161
Query: 412 VLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSL 471
V+K+ DFG A +L V+ D + T Y +PE G DVW++
Sbjct: 162 VVKLCDFGFARTLA-APGEVYDDEVA-TRWYRAPELLVGDVKYGKA--------VDVWAI 211
Query: 472 GCILYNMIYGRTPY---SHIPNTWAKMLA----IARHKDQIEFKPQLANNVTIP------ 518
GC++ M G + S I + M+ I RH++ P A V +P
Sbjct: 212 GCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA-GVRLPEIKERE 270
Query: 519 ----------PTLLQSMKLCLQKDPKARP 537
++ K CL DP RP
Sbjct: 271 PLERRYPKLSEVVIDLAKKCLHIDPDKRP 299
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 26/164 (15%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
E L A++ +H+ +IH D+K N L + +K+ DFG + +++
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILL---------GMDGSVKLTDFGFCAQITPEQSK-- 172
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTW 492
+ T GT +M+PE + + K D+WSLG + MI G PY + N
Sbjct: 173 RSTMVGTPYWMAPEVVTRKAYGP---------KVDIWSLGIMAIEMIEGEPPYLN-ENPL 222
Query: 493 AKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKAR 536
+ IA + P+L N + + CL D + R
Sbjct: 223 RALYLIATNG-----TPELQNPEKLSAIFRDFLNRCLDMDVEKR 261
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 75/174 (43%), Gaps = 35/174 (20%)
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDD 427
I + +++ ++ +H II+ DLKP N L +D GNV +I D G+A L+
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVL--------LDDDGNV-RISDLGLAVELKAG 342
Query: 428 KTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSH 487
+T +GT +M+PE G Y + D ++LG LY MI R P+
Sbjct: 343 QTKTK--GYAGTPGFMAPELL-------LGEEY--DFSVDYFALGVTLYEMIAARGPFR- 390
Query: 488 IPNTWAKMLAIARHKDQIEFKPQ-LANNVTIPPTLLQSMK-LC---LQKDPKAR 536
A + E K + L VT P + K C LQKDP+ R
Sbjct: 391 ---------ARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYD---TASKHLYVLME--KGDTDLSKYMRNLNKMTTLP 361
EVEL + CP+++++ D VY+ K L ++ E G S+ ++ T
Sbjct: 103 REVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTER 161
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I + A++ +H+ I H D+KP N L+ I LK+ DFG A
Sbjct: 162 EASEIX----KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI------LKLTDFGFA 211
Query: 422 CSLQDDKTSVHKD--TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI 479
+T+ H T T Y++PE G D WSLG I Y ++
Sbjct: 212 -----KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS---------CDXWSLGVIXYILL 257
Query: 480 YGRTPY 485
G P+
Sbjct: 258 CGYPPF 263
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 113/259 (43%), Gaps = 45/259 (17%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K++ + + + E +LA P++ ++H + T + +V+ D
Sbjct: 370 AVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHS-CFQTMDRLYFVMEYVNGGD 428
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L +++ + + P+ + + E+ + + + + GII+ DLK N + +
Sbjct: 429 LMYHIQQVGRFKE-PHA----VFYAAEIAIGLFFLQSKGIIYRDLKLDNVM--------L 475
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
D G++ KI DFG+ C ++ V GT +Y++PE Y+ KS
Sbjct: 476 DSEGHI-KIADFGM-CK-ENIWDGVTTKXFCGTPDYIAPEII----------AYQPYGKS 522
Query: 467 -DVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTL-LQS 524
D W+ G +LY M+ G+ P+ +D++ F+ + +NV P ++ ++
Sbjct: 523 VDWWAFGVLLYEMLAGQAPFE------------GEDEDEL-FQSIMEHNVAYPKSMSKEA 569
Query: 525 MKLC---LQKDPKARPTVG 540
+ +C + K P R G
Sbjct: 570 VAICKGLMTKHPGKRLGCG 588
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 24/124 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII-----DC----IGNV-LKIIDFGIA 421
Y++ A++ +H + H+DLKP N LFV + + + C + N +++ DFG A
Sbjct: 139 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 198
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
+ H T T +Y PE + + DVWS+GCIL+ G
Sbjct: 199 TFDHE-----HHTTIVATRHYRPPEVILELGWAQ---------PCDVWSIGCILFEYYRG 244
Query: 482 RTPY 485
T +
Sbjct: 245 FTLF 248
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 377 AVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTA 436
A++ +H+ I H D+KP N L+ K D VLK+ DFG A + T T
Sbjct: 140 AIQFLHSHNIAHRDVKPENLLYTS---KEKDA---VLKLTDFGFA----KETTQNALQTP 189
Query: 437 SGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTP-YSHIPNTWAKM 495
T Y++PE G + D+WSLG I+Y ++ G P YS+ +
Sbjct: 190 CYTPYYVAPEVLGPE---------KYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG 240
Query: 496 LAIARHKDQIEF-KPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q F P+ + + Q ++L L+ DP R T +TQ N+P
Sbjct: 241 MKRRIRLGQYGFPNPEWSE---VSEDAKQLIRLLLKTDPTERLT----ITQFMNHP 289
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 24/124 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII-----DC----IGNV-LKIIDFGIA 421
Y++ A++ +H + H+DLKP N LFV + + + C + N +++ DFG A
Sbjct: 130 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 189
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
+ H T T +Y PE + + DVWS+GCIL+ G
Sbjct: 190 TFDHE-----HHTTIVATRHYRPPEVILELGWAQ---------PCDVWSIGCILFEYYRG 235
Query: 482 RTPY 485
T +
Sbjct: 236 FTLF 239
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 377 AVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTA 436
A++ +H+ I H D+KP N L+ K D VLK+ DFG A + T T
Sbjct: 121 AIQFLHSHNIAHRDVKPENLLYTS---KEKDA---VLKLTDFGFA----KETTQNALQTP 170
Query: 437 SGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTP-YSHIPNTWAKM 495
T Y++PE G + D+WSLG I+Y ++ G P YS+ +
Sbjct: 171 CYTPYYVAPEVLGPE---------KYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG 221
Query: 496 LAIARHKDQIEF-KPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
+ Q F P+ + + Q ++L L+ DP R T +TQ N+P
Sbjct: 222 MKRRIRLGQYGFPNPEWSE---VSEDAKQLIRLLLKTDPTERLT----ITQFMNHP 270
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 39/214 (18%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A K++ L +I + + E+++L + PY++ + Y + + + ME D
Sbjct: 44 MARKLIHLE--IKPAIRNQIIRELQVLHECN-SPYIVGFYGAFY--SDGEISICMEHMDG 98
Query: 346 D-LSKYMRNLNKM--TTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
L + ++ ++ L I ++ L ++E H I+H D+KP+N L
Sbjct: 99 GSLDQVLKEAKRIPEEILGKVSIAVL----RGLAYLREKHQ--IMHRDVKPSNIL----- 147
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI 462
++ G + K+ DFG++ L D ++ GT +YM+PE T S
Sbjct: 148 ---VNSRGEI-KLCDFGVSGQLIDSMA----NSFVGTRSYMAPERLQGTHYS-------- 191
Query: 463 TYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKML 496
+SD+WS+G L + GR P IP AK L
Sbjct: 192 -VQSDIWSMGLSLVELAVGRYP---IPPPDAKEL 221
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 24/124 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII-----DC----IGNV-LKIIDFGIA 421
Y++ A++ +H + H+DLKP N LFV + + + C + N +++ DFG A
Sbjct: 162 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 221
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
+ H T T +Y PE + + DVWS+GCIL+ G
Sbjct: 222 TFDHE-----HHTTIVATRHYRPPEVILELGWAQ---------PCDVWSIGCILFEYYRG 267
Query: 482 RTPY 485
T +
Sbjct: 268 FTLF 271
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 25/187 (13%)
Query: 306 LNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK--GDTDLSKYMRNLNKMTTLPNT 363
EVE L + QG ++++ ++ D Y++ EK G + L+ +++ +
Sbjct: 58 FREVETLYQCQGNKNILELIEFFEDDT--RFYLVFEKLQGGSILA-HIQKQKHFNEREAS 114
Query: 364 MIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACS 423
++ ++ A+ +H GI H DLKP N L + K+ + +KI DF +
Sbjct: 115 RVV-----RDVAAALDFLHTKGIAHRDLKPENIL-CESPEKV-----SPVKICDFDLGSG 163
Query: 424 LQDDK-----TSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNM 478
++ + T+ T G+ YM+PE + R D+WSLG +LY M
Sbjct: 164 MKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKR----CDLWSLGVVLYIM 219
Query: 479 IYGRTPY 485
+ G P+
Sbjct: 220 LSGYPPF 226
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 29/170 (17%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
E++ A++ +H+ +++ D+K N + +D G++ KI DFG+ D ++
Sbjct: 116 EIVSALEYLHSRDVVYRDIKLENLM--------LDKDGHI-KITDFGLCKEGISDGATMK 166
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTW 492
T GT Y++PE D W LG ++Y M+ GR P+ + +
Sbjct: 167 --TFCGTPEYLAPEVLEDNDYGRA---------VDWWGLGVVMYEMMCGRLPFYNQDHER 215
Query: 493 AKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNS 542
L + ++I F P+ T+ P + L+KDPK R G S
Sbjct: 216 LFELILM---EEIRF-PR-----TLSPEAKSLLAGLLKKDPKQRLGGGPS 256
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 18/113 (15%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
++L AV +H GI+H DLKP N L+ LKI DFG++ ++ V
Sbjct: 156 QILEAVAYLHENGIVHRDLKPENLLYA------TPAPDAPLKIADFGLSKIVEH---QVL 206
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
T GT Y +PE G Y + D+WS+G I Y ++ G P+
Sbjct: 207 MKTVCGTPGYCAPEIL-------RGCAY--GPEVDMWSVGIITYILLCGFEPF 250
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 104/248 (41%), Gaps = 38/248 (15%)
Query: 305 YLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYV-LMEKGDTDLSKYMRNLNKMTTLPNT 363
+L+E ++ + + P +I++ V ++ + ME G D ++R LN T
Sbjct: 64 FLSEASIMGQFEH-PNIIRLEGVVTNSMPVMILTEFMENGALD--SFLR-LNDGQF---T 116
Query: 364 MIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACS 423
+I ++ + ++ + +H DL N L N+ V K+ DFG++
Sbjct: 117 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNL---------VCKVSDFGLSRF 167
Query: 424 LQDDKTSVHKDTASGT---LNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYN-MI 479
L+++ + + ++ G + + +PEA + T SD WS G +++ M
Sbjct: 168 LEENSSDPTETSSLGGKIPIRWTAPEAIA---------FRKFTSASDAWSYGIVMWEVMS 218
Query: 480 YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTV 539
+G PY + N + IE +L P +L Q M C QKD ARP
Sbjct: 219 FGERPYWDMSNQ--------DVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRF 270
Query: 540 GNSVTQIN 547
V+ ++
Sbjct: 271 PQVVSALD 278
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 29/170 (17%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
E++ A++ +H+ +++ D+K N + +D G++ KI DFG+ D ++
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLM--------LDKDGHI-KITDFGLCKEGISDGATM- 162
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTW 492
T GT Y++PE D W LG ++Y M+ GR P+ + +
Sbjct: 163 -KTFCGTPEYLAPEVLEDNDYGRA---------VDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 493 AKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNS 542
L + ++I F P+ T+ P + L+KDPK R G S
Sbjct: 213 LFELILM---EEIRF-PR-----TLSPEAKSLLAGLLKKDPKQRLGGGPS 253
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 29/170 (17%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
E++ A++ +H+ +++ D+K N + +D G++ KI DFG+ D ++
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLM--------LDKDGHI-KITDFGLCKEGISDGATMK 163
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTW 492
T GT Y++PE D W LG ++Y M+ GR P+ + +
Sbjct: 164 --TFCGTPEYLAPEVLEDNDYGRA---------VDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 493 AKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNS 542
L + ++I F P+ T+ P + L+KDPK R G S
Sbjct: 213 LFELILM---EEIRF-PR-----TLSPEAKSLLAGLLKKDPKQRLGGGPS 253
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 26/164 (15%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
E L A++ +H+ +IH D+K N L + +K+ DFG + +++
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILL---------GMDGSVKLTDFGFCAQITPEQSK-- 172
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTW 492
+ GT +M+PE + + K D+WSLG + MI G PY + N
Sbjct: 173 RSXMVGTPYWMAPEVVTRKAYGP---------KVDIWSLGIMAIEMIEGEPPYLN-ENPL 222
Query: 493 AKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKAR 536
+ IA + P+L N + + CL+ D + R
Sbjct: 223 RALYLIATNG-----TPELQNPEKLSAIFRDFLNRCLEMDVEKR 261
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 26/164 (15%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
E L A++ +H+ +IH D+K N L + +K+ DFG + +++
Sbjct: 125 ECLQALEFLHSNQVIHRDIKSDNILL---------GMDGSVKLTDFGFCAQITPEQSK-- 173
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTW 492
+ GT +M+PE + + K D+WSLG + MI G PY + N
Sbjct: 174 RSXMVGTPYWMAPEVVTRKAYGP---------KVDIWSLGIMAIEMIEGEPPYLN-ENPL 223
Query: 493 AKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKAR 536
+ IA + P+L N + + CL+ D + R
Sbjct: 224 RALYLIATNG-----TPELQNPEKLSAIFRDFLNRCLEMDVEKR 262
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 26/164 (15%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
E L A++ +H+ +IH ++K N L + +K+ DFG + +++
Sbjct: 125 ECLQALEFLHSNQVIHRNIKSDNILL---------GMDGSVKLTDFGFCAQITPEQSK-- 173
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTW 492
+ T GT +M+PE + + K D+WSLG + MI G PY + N
Sbjct: 174 RSTMVGTPYWMAPEVVTRKAYGP---------KVDIWSLGIMAIEMIEGEPPYLN-ENPL 223
Query: 493 AKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKAR 536
+ IA + P+L N + + CL+ D + R
Sbjct: 224 RALYLIATNG-----TPELQNPEKLSAIFRDFLNRCLEMDVEKR 262
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 113/259 (43%), Gaps = 45/259 (17%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
A+K++ + + + E +LA P++ ++H + T + +V+ D
Sbjct: 49 AVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHS-CFQTMDRLYFVMEYVNGGD 107
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
L +++ + + P+ + + E+ + + + + GII+ DLK N + +
Sbjct: 108 LMYHIQQVGRFKE-PHA----VFYAAEIAIGLFFLQSKGIIYRDLKLDNVM--------L 154
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKS 466
D G++ KI DFG+ C ++ V GT +Y++PE Y+ KS
Sbjct: 155 DSEGHI-KIADFGM-CK-ENIWDGVTTKXFCGTPDYIAPEII----------AYQPYGKS 201
Query: 467 -DVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTL-LQS 524
D W+ G +LY M+ G+ P+ +D++ F+ + +NV P ++ ++
Sbjct: 202 VDWWAFGVLLYEMLAGQAPFE------------GEDEDEL-FQSIMEHNVAYPKSMSKEA 248
Query: 525 MKLC---LQKDPKARPTVG 540
+ +C + K P R G
Sbjct: 249 VAICKGLMTKHPGKRLGCG 267
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 29/187 (15%)
Query: 300 SIADSYLNEVELLAKLQGCPYVIKMHD-YVYDTASKHLYVLMEKGDTDLSKYMRNLNKMT 358
I + L E++LL +L P +I + D + + + ++ ME TDL +++ N +
Sbjct: 54 GINRTALREIKLLQELSH-PNIIGLLDAFGHKSNISLVFDFME---TDLEVIIKD-NSLV 108
Query: 359 TLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDF 418
P+ I + L ++ +H I+H DLKP N L N VLK+ DF
Sbjct: 109 LTPSH---IKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN---------GVLKLADF 156
Query: 419 GIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNM 478
G+A S + T Y +PE G G D+W++GCIL +
Sbjct: 157 GLAKSFGSPNRAYXHQVV--TRWYRAPELLFGARMYGVG--------VDMWAVGCILAEL 206
Query: 479 IYGRTPY 485
+ R P+
Sbjct: 207 LL-RVPF 212
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 27/153 (17%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
IH DL N L NVLKI DFG++ D + + + +PE
Sbjct: 235 IHRDLAARNCLVTEK---------NVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPE 285
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQI 505
A N R + +SDVWS G +L+ G +PY ++ N + ++ +
Sbjct: 286 AL---------NYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--------QTREFV 328
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E +L P + + M+ C +P RP+
Sbjct: 329 EKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPS 361
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 42/262 (16%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A+K V+ S + I +LNE ++ C +V+++ V L V+
Sbjct: 51 VAVKTVNESASLRERI--EFLNEASVMKGFT-CHHVVRLLGVV-SKGQPTLVVMELMAHG 106
Query: 346 DLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG 400
DL Y+R+L N P T+ +I E+ + ++A +H +L N +
Sbjct: 107 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAH 166
Query: 401 NVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGN 458
+ +KI DFG+ + + T ++ G L +M+PE+
Sbjct: 167 DF---------TVKIGDFGMTRDIYE--TDYYRKGGKGLLPVRWMAPESLKDGV------ 209
Query: 459 TYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWA-KMLAIARHKDQIEFKPQLANNVT 516
T SD+WS G +L+ + PY + N K + + DQ + P+ ++
Sbjct: 210 ---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL- 265
Query: 517 IPPTLLQSMKLCLQKDPKARPT 538
M++C Q +P RPT
Sbjct: 266 --------MRMCWQFNPNMRPT 279
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 42/262 (16%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+A+K V+ S + I +LNE ++ C +V+++ V L V+
Sbjct: 50 VAVKTVNESASLRERI--EFLNEASVMKGFT-CHHVVRLLGVV-SKGQPTLVVMELMAHG 105
Query: 346 DLSKYMRNL-----NKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG 400
DL Y+R+L N P T+ +I E+ + ++A +H +L N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAH 165
Query: 401 NVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL--NYMSPEAAGQTSSSGGGN 458
+ +KI DFG+ + + T ++ G L +M+PE+
Sbjct: 166 DF---------TVKIGDFGMTRDIYE--TDYYRKGGKGLLPVRWMAPESLKDGV------ 208
Query: 459 TYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWA-KMLAIARHKDQIEFKPQLANNVT 516
T SD+WS G +L+ + PY + N K + + DQ + P+ ++
Sbjct: 209 ---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL- 264
Query: 517 IPPTLLQSMKLCLQKDPKARPT 538
M++C Q +P RPT
Sbjct: 265 --------MRMCWQFNPNMRPT 278
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 30/181 (16%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDD---KT 429
+ L ++ +H+ I+H D+K N L + G+ + DFG A LQ D K+
Sbjct: 193 QALEGLEYLHSRRILHGDVKADNVLLSSD--------GSHAALCDFGHAVCLQPDGLGKS 244
Query: 430 SVHKDTASGTLNYMSPEAA-GQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHI 488
+ D GT +M+PE G++ + K DVWS C++ +M+ G P++
Sbjct: 245 LLTGDYIPGTETHMAPEVVLGRSCDA----------KVDVWSSCCMMLHMLNGCHPWTQF 294
Query: 489 PNTWAKMLAIARHKDQI-EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
L IA + E P A P Q+++ L+K+P R + ++N
Sbjct: 295 FRG-PLCLKIASEPPPVREIPPSCA------PLTAQAIQEGLRKEPIHRVSAAELGGKVN 347
Query: 548 N 548
Sbjct: 348 R 348
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K + V L+ ITD +L E ++ K P V+ + + L VL
Sbjct: 56 KKIHCAVKSLNRITDIGEVSQFLTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 114
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
DL ++RN T+ + +I ++ +K + + +H DL N +
Sbjct: 115 HGDLRNFIRNETHNPTVKD----LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF- 169
Query: 404 KIIDCIGNVLKIIDFGIACSLQD-DKTSVHKDTASGT-LNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+A + D + SVH T + + +M+ E+ T +
Sbjct: 170 --------TVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL---------QTQK 212
Query: 462 ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
T KSDVWS G +L+ M G PY + NT+ + + + + ++ P+ P
Sbjct: 213 FTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ--PEYC-----PDP 264
Query: 521 LLQSMKLCLQKDPKARPTVGNSVTQIN 547
L + M C + RP+ V++I+
Sbjct: 265 LYEVMLKCWHPKAEMRPSFSELVSRIS 291
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 28/172 (16%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQD--DKTSVHKDTASG 438
+HA IH +L N L + L +KI DFG+A ++ + + V +D S
Sbjct: 133 LHAQHYIHRNLAARNVLLDNDRL---------VKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 439 TLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAI 498
Y +PE + Y+ Y SDVWS G LY ++ P + +++ I
Sbjct: 184 VFWY-APECLKE---------YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGI 233
Query: 499 A-------RHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
A R + +E +L P + MK C + + RPT N +
Sbjct: 234 AQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 27/153 (17%)
Query: 387 IHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPE 446
IH DL N L NVLKI DFG++ D + + + +PE
Sbjct: 235 IHRDLAARNCLVTEK---------NVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPE 285
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQI 505
A N R + +SDVWS G +L+ G +PY ++ N + ++ +
Sbjct: 286 AL---------NYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--------QTREFV 328
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT 538
E +L P + + M+ C +P RP+
Sbjct: 329 EKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPS 361
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 111/252 (44%), Gaps = 46/252 (18%)
Query: 303 DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKH--LYVLMEK-GDTDLSKYMRNLNKMTT 359
D + E + + KL P ++K Y SK +Y++ E + L Y+R+ K
Sbjct: 48 DEFFQEAQTMMKLSH-PKLVKF----YGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLE 102
Query: 360 LPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFG 419
P+ ++ + Y++ + + + IH DL N L ++ C+ K+ DFG
Sbjct: 103 -PSQLLEMC---YDVCEGMAFLESHQFIHRDLAARNCLVDRDL-----CV----KVSDFG 149
Query: 420 IACSLQDDKTSVHKDTASGT---LNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILY 476
+ + DD+ ++ GT + + +PE + ++ + KSDVW+ G +++
Sbjct: 150 MTRYVLDDQYV----SSVGTKFPVKWSAPEVF---------HYFKYSSKSDVWAFGILMW 196
Query: 477 NMI-YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKA 535
+ G+ PY N+ + H+ ++P LA++ T+ Q M C + P+
Sbjct: 197 EVFSLGKMPYDLYTNSEVVLKVSQGHR---LYRPHLASD-----TIYQIMYSCWHELPEK 248
Query: 536 RPTVGNSVTQIN 547
RPT ++ I
Sbjct: 249 RPTFQQLLSSIE 260
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 27/193 (13%)
Query: 301 IADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK--GDTDLSKYMRNLNKMT 358
I EVE+L + QG V+++ + Y++ EK G + LS ++
Sbjct: 53 IRSRVFREVEMLYQCQGHRNVLEL--IEFFEEEDRFYLVFEKMRGGSILS-HIHKRRHFN 109
Query: 359 TLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG-NVLKIIDCIGNVLKIID 417
L ++++ ++ A+ +H GI H DLKP N L N + + KI D
Sbjct: 110 ELEASVVV-----QDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPV-------KICD 157
Query: 418 FGIACS--LQDDKTSVHKD---TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLG 472
FG+ L D + + T G+ YM+PE S + Y + D+WSLG
Sbjct: 158 FGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEA--SIY--DKRCDLWSLG 213
Query: 473 CILYNMIYGRTPY 485
ILY ++ G P+
Sbjct: 214 VILYILLSGYPPF 226
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 26/164 (15%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
E L A++ +H+ +IH D+K N L + +K+ DFG + +++
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILL---------GMDGSVKLTDFGFCAQITPEQSK-- 172
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTW 492
+ GT +M+PE + + K D+WSLG + MI G PY + N
Sbjct: 173 RSEMVGTPYWMAPEVVTRKAYGP---------KVDIWSLGIMAIEMIEGEPPYLN-ENPL 222
Query: 493 AKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKAR 536
+ IA + P+L N + + CL D + R
Sbjct: 223 RALYLIATNG-----TPELQNPEKLSAIFRDFLNRCLDMDVEKR 261
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 19/105 (18%)
Query: 386 IIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSP 445
++H DL N L N +KI DFG+A L+ D+ + D + +M+
Sbjct: 138 LVHRDLAARNVLVKSP---------NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 188
Query: 446 EAAGQTSSSGGGNTYRITYKSDVWSLGCILYN-MIYGRTPYSHIP 489
E + + T++SDVWS G ++ M +G PY IP
Sbjct: 189 ECI---------HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP 224
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 386 IIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSP 445
++H DL N L N +KI DFG+A L+ D+ + D + +M+
Sbjct: 161 LVHRDLAARNVLVKSP---------NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 211
Query: 446 EAAGQTSSSGGGNTYRITYKSDVWSLGCILYN-MIYGRTPYSHIPN 490
E + + T++SDVWS G ++ M +G PY IP
Sbjct: 212 ECI---------HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT 248
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 32/204 (15%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K +A+K++D + + S+ + EV + K+ P ++K+ + + K LY++ E
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLF-REVRI-XKVLNHPNIVKLFEVI--ETEKTLYLVXEYA 95
Query: 344 DT-DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNV 402
++ Y+ + + +++ AV+ H I+H DLK N L
Sbjct: 96 SGGEVFDYLVAHGRXKEKEARA-----KFRQIVSAVQYCHQKFIVHRDLKAENLL----- 145
Query: 403 LKIIDCIGNVLKIIDFGIACSLQDDKTSVHK-DTASGTLNYMSPEAAGQTSSSGGGNTYR 461
+D N+ KI DFG + ++ T +K D G Y +PE G
Sbjct: 146 ---LDADXNI-KIADFGFS----NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP----- 192
Query: 462 ITYKSDVWSLGCILYNMIYGRTPY 485
+ DVWSLG ILY ++ G P+
Sbjct: 193 ---EVDVWSLGVILYTLVSGSLPF 213
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 29/194 (14%)
Query: 301 IADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK--GDTDLSKYMRNLNKMT 358
I EVE+L + QG V+++ + Y++ EK G + LS ++
Sbjct: 53 IRSRVFREVEMLYQCQGHRNVLEL--IEFFEEEDRFYLVFEKMRGGSILS-HIHKRRHFN 109
Query: 359 TLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVG----NVLKIIDCIGNVLK 414
L ++++ ++ A+ +H GI H DLKP N L + +KI D
Sbjct: 110 ELEASVVV-----QDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICD------- 157
Query: 415 IIDFGIACSLQDDKTSVHKD---TASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSL 471
D G L D + + T G+ YM+PE S R D+WSL
Sbjct: 158 -FDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKR----CDLWSL 212
Query: 472 GCILYNMIYGRTPY 485
G ILY ++ G P+
Sbjct: 213 GVILYILLSGYPPF 226
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 30/181 (16%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDD---KT 429
+ L ++ +H+ I+H D+K N L + G+ + DFG A LQ D K
Sbjct: 174 QALEGLEYLHSRRILHGDVKADNVLLSSD--------GSHAALCDFGHAVCLQPDGLGKD 225
Query: 430 SVHKDTASGTLNYMSPEAA-GQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHI 488
+ D GT +M+PE G++ + K DVWS C++ +M+ G P++
Sbjct: 226 LLTGDYIPGTETHMAPEVVLGRSCDA----------KVDVWSSCCMMLHMLNGCHPWTQF 275
Query: 489 PNTWAKMLAIARHKDQI-EFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQIN 547
L IA + E P A P Q+++ L+K+P R + ++N
Sbjct: 276 FRG-PLCLKIASEPPPVREIPPSCA------PLTAQAIQEGLRKEPIHRVSAAELGGKVN 328
Query: 548 N 548
Sbjct: 329 R 329
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 101/248 (40%), Gaps = 38/248 (15%)
Query: 305 YLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYV-LMEKGDTDLSKYMRNLNKMTTLPNT 363
+L+E ++ + + P +I++ V ++ + ME G D + ++ T
Sbjct: 62 FLSEASIMGQFEH-PNIIRLEGVVTNSMPVMILTEFMENGALD------SFLRLNDGQFT 114
Query: 364 MIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACS 423
+I ++ + ++ + +H DL N L N+ V K+ DFG++
Sbjct: 115 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNL---------VCKVSDFGLSRF 165
Query: 424 LQDDKTSVHKDTASGT---LNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYN-MI 479
L+++ + ++ G + + +PEA + T SD WS G +++ M
Sbjct: 166 LEENSSDPTYTSSLGGKIPIRWTAPEAIA---------FRKFTSASDAWSYGIVMWEVMS 216
Query: 480 YGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTV 539
+G PY + N + IE +L P +L Q M C QKD ARP
Sbjct: 217 FGERPYWDMSNQ--------DVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRF 268
Query: 540 GNSVTQIN 547
V+ ++
Sbjct: 269 PQVVSALD 276
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 319 PYVIKMHDYVYDTASKHLYV-LMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLA 377
P ++ ++ V + ++++ L+E G + + +M LP + + + L
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLG-----QLIKQMGCLPEDRALYYLG--QALEG 178
Query: 378 VKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDD---KTSVHKD 434
++ +H I+H D+K N L + G+ + DFG A LQ D K+ + D
Sbjct: 179 LEYLHTRRILHGDVKADNVLLSSD--------GSRAALCDFGHALCLQPDGLGKSLLTGD 230
Query: 435 TASGTLNYMSPEAA-GQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
GT +M+PE G+ + K D+WS C++ +M+ G P++
Sbjct: 231 YIPGTETHMAPEVVMGKPCDA----------KVDIWSSCCMMLHMLNGCHPWT 273
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 29/170 (17%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
E++ A++ +H+ +++ D+K N + +D G++ KI DFG+ D ++
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLM--------LDKDGHI-KITDFGLCKEGISDGATMK 163
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTW 492
GT Y++PE D W LG ++Y M+ GR P+ + +
Sbjct: 164 --XFCGTPEYLAPEVLEDNDYGRA---------VDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 493 AKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNS 542
L + ++I F P+ T+ P + L+KDPK R G S
Sbjct: 213 LFELILM---EEIRF-PR-----TLSPEAKSLLAGLLKKDPKQRLGGGPS 253
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 319 PYVIKMHDYVYDTASKHLYV-LMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLA 377
P ++ ++ V + ++++ L+E G + + +M LP + + + L
Sbjct: 110 PRIVPLYGAVREGPWVNIFMELLEGGSLG-----QLIKQMGCLPEDRALYYLG--QALEG 162
Query: 378 VKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDD---KTSVHKD 434
++ +H I+H D+K N L + G+ + DFG A LQ D K+ + D
Sbjct: 163 LEYLHTRRILHGDVKADNVLLSSD--------GSRAALCDFGHALCLQPDGLGKSLLTGD 214
Query: 435 TASGTLNYMSPEAA-GQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
GT +M+PE G+ + K D+WS C++ +M+ G P++
Sbjct: 215 YIPGTETHMAPEVVMGKPCDA----------KVDIWSSCCMMLHMLNGCHPWT 257
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 29/170 (17%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
E++ A++ +H+ +++ D+K N + +D G++ KI DFG+ D ++
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLM--------LDKDGHI-KITDFGLCKEGISDGATMK 163
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTW 492
GT Y++PE D W LG ++Y M+ GR P+ + +
Sbjct: 164 --XFCGTPEYLAPEVLEDNDYGRA---------VDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 493 AKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNS 542
L + ++I F P+ T+ P + L+KDPK R G S
Sbjct: 213 LFELILM---EEIRF-PR-----TLSPEAKSLLAGLLKKDPKQRLGGGPS 253
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 319 PYVIKMHDYVYDTASKHLYV-LMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLA 377
P ++ ++ V + ++++ L+E G + + +M LP + + + L
Sbjct: 124 PRIVPLYGAVREGPWVNIFMELLEGGSLG-----QLIKQMGCLPEDRALYYLG--QALEG 176
Query: 378 VKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDD---KTSVHKD 434
++ +H I+H D+K N L + G+ + DFG A LQ D K+ + D
Sbjct: 177 LEYLHTRRILHGDVKADNVLLSSD--------GSRAALCDFGHALCLQPDGLGKSLLTGD 228
Query: 435 TASGTLNYMSPEAA-GQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
GT +M+PE G+ + K D+WS C++ +M+ G P++
Sbjct: 229 YIPGTETHMAPEVVMGKPCDA----------KVDIWSSCCMMLHMLNGCHPWT 271
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K + V L+ ITD +L E ++ K P V+ + + L VL
Sbjct: 57 KKIHCAVKSLNRITDIGEVSQFLTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 115
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
DL ++RN T+ + +I ++ +K + + +H DL N +
Sbjct: 116 HGDLRNFIRNETHNPTVKD----LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF- 170
Query: 404 KIIDCIGNVLKIIDFGIACSLQD-DKTSVHKDTASGT-LNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+A + D + SVH T + + +M+ E+ T +
Sbjct: 171 --------TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL---------QTQK 213
Query: 462 ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
T KSDVWS G +L+ M G PY + NT+ + + + + ++ P+ P
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ--PEYC-----PDP 265
Query: 521 LLQSMKLCLQKDPKARPTVGNSVTQIN 547
L + M C + RP+ V++I+
Sbjct: 266 LYEVMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 29/170 (17%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
E++ A++ +H+ +++ D+K N + +D G++ KI DFG+ D ++
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLM--------LDKDGHI-KITDFGLCKEGISDGATMK 163
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTW 492
GT Y++PE D W LG ++Y M+ GR P+ + +
Sbjct: 164 --XFCGTPEYLAPEVLEDNDYGRA---------VDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 493 AKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNS 542
L + ++I F P+ T+ P + L+KDPK R G S
Sbjct: 213 LFELILM---EEIRF-PR-----TLSPEAKSLLAGLLKKDPKQRLGGGPS 253
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K + V L+ ITD +L E ++ K P V+ + + L VL
Sbjct: 116 KKIHCAVKSLNRITDIGEVSQFLTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 174
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
DL ++RN T+ + +I ++ +K + + +H DL N +
Sbjct: 175 HGDLRNFIRNETHNPTVKD----LIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF- 229
Query: 404 KIIDCIGNVLKIIDFGIACSLQDDKT-SVHKDTASGT-LNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+A + D + SVH T + + +M+ E+ T +
Sbjct: 230 --------TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL---------QTQK 272
Query: 462 ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
T KSDVWS G +L+ M G PY + NT+ + + + + ++ P+ P
Sbjct: 273 FTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ--PEYC-----PDP 324
Query: 521 LLQSMKLCLQKDPKARPTVGNSVTQIN 547
L + M C + RP+ V++I+
Sbjct: 325 LYEVMLKCWHPKAEMRPSFSELVSRIS 351
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 24/124 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL------KI----IDCIGNVLKIIDFGIA 421
Y++ +V +H+ + H+DLKP N LFV + KI I +K++DFG A
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
DD+ H T T +Y +PE S DVWS+GCIL G
Sbjct: 185 T--YDDE---HHSTLVSTRHYRAPEVILALGWSQ---------PCDVWSIGCILIEYYLG 230
Query: 482 RTPY 485
T +
Sbjct: 231 FTVF 234
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K + V L+ ITD +L E ++ K P V+ + + L VL
Sbjct: 55 KKIHCAVKSLNRITDIGEVSQFLTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 113
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
DL ++RN T+ + +I ++ +K + + +H DL N +
Sbjct: 114 HGDLRNFIRNETHNPTVKD----LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF- 168
Query: 404 KIIDCIGNVLKIIDFGIACSLQD-DKTSVHKDTASGT-LNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+A + D + SVH T + + +M+ E+ T +
Sbjct: 169 --------TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL---------QTQK 211
Query: 462 ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
T KSDVWS G +L+ M G PY + NT+ + + + + ++ P+ P
Sbjct: 212 FTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ--PEYC-----PDP 263
Query: 521 LLQSMKLCLQKDPKARPTVGNSVTQIN 547
L + M C + RP+ V++I+
Sbjct: 264 LYEVMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 29/170 (17%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
E++ A++ +H+ +++ D+K N + +D G++ KI DFG+ D ++
Sbjct: 118 EIVSALEYLHSRDVVYRDIKLENLM--------LDKDGHI-KITDFGLCKEGISDGATMK 168
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTW 492
GT Y++PE D W LG ++Y M+ GR P+ + +
Sbjct: 169 --XFCGTPEYLAPEVLEDNDYGRA---------VDWWGLGVVMYEMMCGRLPFYNQDHER 217
Query: 493 AKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNS 542
L + ++I F P+ T+ P + L+KDPK R G S
Sbjct: 218 LFELILM---EEIRF-PR-----TLSPEAKSLLAGLLKKDPKQRLGGGPS 258
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 70/174 (40%), Gaps = 31/174 (17%)
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
+ ++L V H+ I H DLK N L G+ LKI DFG + K+S
Sbjct: 122 FQQLLSGVSYCHSMQICHRDLKLENTLLDGSP-------APRLKICDFGYS------KSS 168
Query: 431 V-HKDTAS--GTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS- 486
V H S GT Y++PE + G +DVWS G LY M+ G P+
Sbjct: 169 VLHSQPKSTVGTPAYIAPEVLLRQEYDGK--------IADVWSCGVTLYVMLVGAYPFED 220
Query: 487 -HIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTV 539
P + K + + + K + +++ I P + DP R ++
Sbjct: 221 PEEPRDYRKTI-----QRILSVKYSIPDDIRISPECCHLISRIFVADPATRISI 269
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K + V L+ ITD +L E ++ K P V+ + + L VL
Sbjct: 58 KKIHCAVKSLNRITDIGEVSQFLTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 116
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
DL ++RN T+ + +I ++ +K + + +H DL N +
Sbjct: 117 HGDLRNFIRNETHNPTVKD----LIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF- 171
Query: 404 KIIDCIGNVLKIIDFGIACSLQDDKT-SVHKDTASGT-LNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+A + D + SVH T + + +M+ E+ T +
Sbjct: 172 --------TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL---------QTQK 214
Query: 462 ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
T KSDVWS G +L+ M G PY + NT+ + + + + ++ P+ P
Sbjct: 215 FTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ--PEYC-----PDP 266
Query: 521 LLQSMKLCLQKDPKARPTVGNSVTQIN 547
L + M C + RP+ V++I+
Sbjct: 267 LYEVMLKCWHPKAEMRPSFSELVSRIS 293
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 41/202 (20%)
Query: 289 KVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHL-YVLMEKGDTDL 347
K+ + DIT + + + E++++AK Q ++++ + D L YV M G
Sbjct: 61 KLAAMVDITTEELKQQFDQEIKVMAKCQH-ENLVELLGFSSDGDDLCLVYVYMPNGSL-- 117
Query: 348 SKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGI--------IHSDLKPANFLFV 399
L++++ L T + W+ M + + A GI IH D+K AN L
Sbjct: 118 ------LDRLSCLDGTPP---LSWH-MRCKIAQGAANGINFLHENHHIHRDIKSANILLD 167
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNT 459
KI DFG+A + + +V GT YM+PEA
Sbjct: 168 EAF---------TAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL----------R 208
Query: 460 YRITYKSDVWSLGCILYNMIYG 481
IT KSD++S G +L +I G
Sbjct: 209 GEITPKSDIYSFGVVLLEIITG 230
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K + V L+ ITD +L E ++ K P V+ + + L VL
Sbjct: 75 KKIHCAVKSLNRITDIGEVSQFLTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 133
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
DL ++RN T+ + +I ++ +K + + +H DL N +
Sbjct: 134 HGDLRNFIRNETHNPTVKD----LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF- 188
Query: 404 KIIDCIGNVLKIIDFGIACSLQD-DKTSVHKDTASGT-LNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+A + D + SVH T + + +M+ E+ T +
Sbjct: 189 --------TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL---------QTQK 231
Query: 462 ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
T KSDVWS G +L+ M G PY + NT+ + + + + ++ P+ P
Sbjct: 232 FTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ--PEYC-----PDP 283
Query: 521 LLQSMKLCLQKDPKARPTVGNSVTQIN 547
L + M C + RP+ V++I+
Sbjct: 284 LYEVMLKCWHPKAEMRPSFSELVSRIS 310
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K + V L+ ITD +L E ++ K P V+ + + L VL
Sbjct: 49 KKIHCAVKSLNRITDIGEVSQFLTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 107
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
DL ++RN T+ + +I ++ +K + + +H DL N +
Sbjct: 108 HGDLRNFIRNETHNPTVKD----LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF- 162
Query: 404 KIIDCIGNVLKIIDFGIACSLQD-DKTSVHKDTASGT-LNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+A + D + SVH T + + +M+ E+ T +
Sbjct: 163 --------TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL---------QTQK 205
Query: 462 ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
T KSDVWS G +L+ M G PY + NT+ + + + + ++ P+ P
Sbjct: 206 FTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ--PEYC-----PDP 257
Query: 521 LLQSMKLCLQKDPKARPTVGNSVTQIN 547
L + M C + RP+ V++I+
Sbjct: 258 LYEVMLKCWHPKAEMRPSFSELVSRIS 284
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 28/172 (16%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQD--DKTSVHKDTASG 438
+H+ IH +L N L + L +KI DFG+A ++ + + V +D S
Sbjct: 133 LHSQHYIHRNLAARNVLLDNDRL---------VKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 439 TLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAI 498
Y +PE + Y+ Y SDVWS G LY ++ P + +++ I
Sbjct: 184 VFWY-APECLKE---------YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGI 233
Query: 499 A-------RHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSV 543
A R + +E +L P + MK C + + RPT N +
Sbjct: 234 AQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K + V L+ ITD +L E ++ K P V+ + + L VL
Sbjct: 57 KKIHCAVKSLNRITDIGEVSQFLTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 115
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
DL ++RN T+ + +I ++ +K + + +H DL N +
Sbjct: 116 HGDLRNFIRNETHNPTVKD----LIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF- 170
Query: 404 KIIDCIGNVLKIIDFGIACSLQDDKT-SVHKDTASGT-LNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+A + D + SVH T + + +M+ E+ T +
Sbjct: 171 --------TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL---------QTQK 213
Query: 462 ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
T KSDVWS G +L+ M G PY + NT+ + + + + ++ P+ P
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ--PEYC-----PDP 265
Query: 521 LLQSMKLCLQKDPKARPTVGNSVTQIN 547
L + M C + RP+ V++I+
Sbjct: 266 LYEVMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K + V L+ ITD +L E ++ K P V+ + + L VL
Sbjct: 76 KKIHCAVKSLNRITDIGEVSQFLTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 134
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
DL ++RN T+ + +I ++ +K + + +H DL N +
Sbjct: 135 HGDLRNFIRNETHNPTVKD----LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF- 189
Query: 404 KIIDCIGNVLKIIDFGIACSLQD-DKTSVHKDTASGT-LNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+A + D + SVH T + + +M+ E+ T +
Sbjct: 190 --------TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL---------QTQK 232
Query: 462 ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
T KSDVWS G +L+ M G PY + NT+ + + + + ++ P+ P
Sbjct: 233 FTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ--PEYC-----PDP 284
Query: 521 LLQSMKLCLQKDPKARPTVGNSVTQIN 547
L + M C + RP+ V++I+
Sbjct: 285 LYEVMLKCWHPKAEMRPSFSELVSRIS 311
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K + V L+ ITD +L E ++ K P V+ + + L VL
Sbjct: 56 KKIHCAVKSLNRITDIGEVSQFLTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 114
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
DL ++RN T+ + +I ++ +K + + +H DL N +
Sbjct: 115 HGDLRNFIRNETHNPTVKD----LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF- 169
Query: 404 KIIDCIGNVLKIIDFGIACSLQD-DKTSVHKDTASGT-LNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+A + D + SVH T + + +M+ E+ T +
Sbjct: 170 --------TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL---------QTQK 212
Query: 462 ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
T KSDVWS G +L+ M G PY + NT+ + + + + ++ P+ P
Sbjct: 213 FTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ--PEYC-----PDP 264
Query: 521 LLQSMKLCLQKDPKARPTVGNSVTQIN 547
L + M C + RP+ V++I+
Sbjct: 265 LYEVMLKCWHPKAEMRPSFSELVSRIS 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K + V L+ ITD +L E ++ K P V+ + + L VL
Sbjct: 62 KKIHCAVKSLNRITDIGEVSQFLTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 120
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
DL ++RN T+ + +I ++ +K + + +H DL N +
Sbjct: 121 HGDLRNFIRNETHNPTVKD----LIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF- 175
Query: 404 KIIDCIGNVLKIIDFGIACSLQDDKT-SVHKDTASGT-LNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+A + D + SVH T + + +M+ E+ T +
Sbjct: 176 --------TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL---------QTQK 218
Query: 462 ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
T KSDVWS G +L+ M G PY + NT+ + + + + ++ P+ P
Sbjct: 219 FTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ--PEYC-----PDP 270
Query: 521 LLQSMKLCLQKDPKARPTVGNSVTQIN 547
L + M C + RP+ V++I+
Sbjct: 271 LYEVMLKCWHPKAEMRPSFSELVSRIS 297
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K + V L+ ITD +L E ++ K P V+ + + L VL
Sbjct: 57 KKIHCAVKSLNRITDIGEVSQFLTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 115
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
DL ++RN T+ + +I ++ +K + + +H DL N +
Sbjct: 116 HGDLRNFIRNETHNPTVKD----LIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF- 170
Query: 404 KIIDCIGNVLKIIDFGIACSLQDDKT-SVHKDTASGT-LNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+A + D + SVH T + + +M+ E+ T +
Sbjct: 171 --------TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL---------QTQK 213
Query: 462 ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
T KSDVWS G +L+ M G PY + NT+ + + + + ++ P+ P
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ--PEYC-----PDP 265
Query: 521 LLQSMKLCLQKDPKARPTVGNSVTQIN 547
L + M C + RP+ V++I+
Sbjct: 266 LYEVMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K + V L+ ITD +L E ++ K P V+ + + L VL
Sbjct: 55 KKIHCAVKSLNRITDIGEVSQFLTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 113
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
DL ++RN T+ + +I ++ +K + + +H DL N +
Sbjct: 114 HGDLRNFIRNETHNPTVKD----LIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF- 168
Query: 404 KIIDCIGNVLKIIDFGIACSLQDDKT-SVHKDTASGT-LNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+A + D + SVH T + + +M+ E+ T +
Sbjct: 169 --------TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL---------QTQK 211
Query: 462 ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
T KSDVWS G +L+ M G PY + NT+ + + + + ++ P+ P
Sbjct: 212 FTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ--PEYC-----PDP 263
Query: 521 LLQSMKLCLQKDPKARPTVGNSVTQIN 547
L + M C + RP+ V++I+
Sbjct: 264 LYEVMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K + V L+ ITD +L E ++ K P V+ + + L VL
Sbjct: 58 KKIHCAVKSLNRITDIGEVSQFLTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 116
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
DL ++RN T+ + +I ++ +K + + +H DL N +
Sbjct: 117 HGDLRNFIRNETHNPTVKD----LIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF- 171
Query: 404 KIIDCIGNVLKIIDFGIACSLQDDKT-SVHKDTASGT-LNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+A + D + SVH T + + +M+ E+ T +
Sbjct: 172 --------TVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL---------QTQK 214
Query: 462 ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
T KSDVWS G +L+ M G PY + NT+ + + + + ++ P+ P
Sbjct: 215 FTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ--PEYC-----PDP 266
Query: 521 LLQSMKLCLQKDPKARPTVGNSVTQIN 547
L + M C + RP+ V++I+
Sbjct: 267 LYEVMLKCWHPKAEMRPSFSELVSRIS 293
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 41/202 (20%)
Query: 289 KVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHL-YVLMEKGDTDL 347
K+ + DIT + + + E++++AK Q ++++ + D L YV M G
Sbjct: 61 KLAAMVDITTEELKQQFDQEIKVMAKCQH-ENLVELLGFSSDGDDLCLVYVYMPNGSL-- 117
Query: 348 SKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGI--------IHSDLKPANFLFV 399
L++++ L T + W+ M + + A GI IH D+K AN L
Sbjct: 118 ------LDRLSCLDGTPP---LSWH-MRCKIAQGAANGINFLHENHHIHRDIKSANILLD 167
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNT 459
KI DFG+A + + +V GT YM+PEA
Sbjct: 168 EAF---------TAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL----------R 208
Query: 460 YRITYKSDVWSLGCILYNMIYG 481
IT KSD++S G +L +I G
Sbjct: 209 GEITPKSDIYSFGVVLLEIITG 230
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 34/188 (18%)
Query: 298 DQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT----DLSKYMRN 353
D I L E+ +L +L+ P ++ + + + L+++ E D +L +Y R
Sbjct: 42 DPVIKKIALREIRMLKQLKH-PNLVNLLEVF--RRKRRLHLVFEYCDHTVLHELDRYQRG 98
Query: 354 LNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVL 413
+ P ++ I ++ L AV H IH D+KP N L + +V+
Sbjct: 99 V------PEHLVKSIT--WQTLQAVNFCHKHNCIHRDVKPENILITKH---------SVI 141
Query: 414 KIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGC 473
K+ DFG A L S + D T Y SPE + G DVW++GC
Sbjct: 142 KLCDFGFARLLTG--PSDYYDDEVATRWYRSPELLVGDTQYGP--------PVDVWAIGC 191
Query: 474 ILYNMIYG 481
+ ++ G
Sbjct: 192 VFAELLSG 199
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K + V L+ ITD +L E ++ K P V+ + + L VL
Sbjct: 54 KKIHCAVKSLNRITDIGEVSQFLTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 112
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
DL ++RN T+ + +I ++ +K + + +H DL N +
Sbjct: 113 HGDLRNFIRNETHNPTVKD----LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF- 167
Query: 404 KIIDCIGNVLKIIDFGIACSLQD-DKTSVHKDTASGT-LNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+A + D + SVH T + + +M+ E+ T +
Sbjct: 168 --------TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL---------QTQK 210
Query: 462 ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
T KSDVWS G +L+ M G PY + NT+ + + + + ++ P+ P
Sbjct: 211 FTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ--PEYC-----PDP 262
Query: 521 LLQSMKLCLQKDPKARPTVGNSVTQIN 547
L + M C + RP+ V++I+
Sbjct: 263 LYEVMLKCWHPKAEMRPSFSELVSRIS 289
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K + V L+ ITD +L E ++ K P V+ + + L VL
Sbjct: 52 KKIHCAVKSLNRITDIGEVSQFLTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 110
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
DL ++RN T+ + +I ++ +K + + +H DL N +
Sbjct: 111 HGDLRNFIRNETHNPTVKD----LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF- 165
Query: 404 KIIDCIGNVLKIIDFGIACSLQD-DKTSVHKDTASGT-LNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+A + D + SVH T + + +M+ E+ T +
Sbjct: 166 --------TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL---------QTQK 208
Query: 462 ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
T KSDVWS G +L+ M G PY + NT+ + + + + ++ P+ P
Sbjct: 209 FTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ--PEYC-----PDP 260
Query: 521 LLQSMKLCLQKDPKARPTVGNSVTQIN 547
L + M C + RP+ V++I+
Sbjct: 261 LYEVMLKCWHPKAEMRPSFSELVSRIS 287
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 284 KPLALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKG 343
K + V L+ ITD +L E ++ K P V+ + + L VL
Sbjct: 57 KKIHCAVKSLNRITDIGEVSQFLTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 115
Query: 344 DTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL 403
DL ++RN T+ + +I ++ +K + + +H DL N +
Sbjct: 116 HGDLRNFIRNETHNPTVKD----LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF- 170
Query: 404 KIIDCIGNVLKIIDFGIACSLQD-DKTSVHKDTASGT-LNYMSPEAAGQTSSSGGGNTYR 461
+K+ DFG+A + D + SVH T + + +M+ E+ T +
Sbjct: 171 --------TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL---------QTQK 213
Query: 462 ITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT 520
T KSDVWS G +L+ M G PY + NT+ + + + + ++ P+ P
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ--PEYC-----PDP 265
Query: 521 LLQSMKLCLQKDPKARPTVGNSVTQIN 547
L + M C + RP+ V++I+
Sbjct: 266 LYEVMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 118/289 (40%), Gaps = 62/289 (21%)
Query: 286 LALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDT 345
+ + V L D +D + D + E ELL LQ +++K + + + V
Sbjct: 44 ILVAVKTLKDASDNARKD-FHREAELLTNLQH-EHIVKFYGVCVE-GDPLIMVFEYMKHG 100
Query: 346 DLSKYMRNLNKMTTL-----PNTMIIIIMHWYEMLLAVKEIHAAGII--------HSDLK 392
DL+K++R L P T + +ML ++I AAG++ H DL
Sbjct: 101 DLNKFLRAHGPDAVLMAEGNPPTELTQ----SQMLHIAQQI-AAGMVYLASQHFVHRDLA 155
Query: 393 PANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL---NYMSPEAAG 449
N L N+L +KI DFG++ +D ++ + T+ +M PE+
Sbjct: 156 TRNCLVGENLL---------VKIGDFGMS---RDVYSTDYYRVGGHTMLPIRWMPPESI- 202
Query: 450 QTSSSGGGNTYR-ITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQIEF 507
YR T +SDVWSLG +L+ + YG+ P+ + N + IE
Sbjct: 203 ---------MYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-----------EVIEC 242
Query: 508 KPQ---LANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNPEGS 553
Q L T P + + M C Q++P R + T + N + S
Sbjct: 243 ITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 116/271 (42%), Gaps = 62/271 (22%)
Query: 290 VVDLSDITDQSIA--DSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTDL 347
+V + + D ++A + E ELL LQ +++K + D + V DL
Sbjct: 47 LVAVKALKDPTLAARKDFQREAELLTNLQH-EHIVKFYGVCGD-GDPLIMVFEYMKHGDL 104
Query: 348 SKYMRNLNKMTTLPNTMIII---------IMHWYEMLLAVKEIHAAGII--------HSD 390
+K++R P+ MI++ + +ML +I A+G++ H D
Sbjct: 105 NKFLRAHG-----PDAMILVDGQPRQAKGELGLSQMLHIASQI-ASGMVYLASQHFVHRD 158
Query: 391 LKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTL---NYMSPEA 447
L N L N+L +KI DFG++ +D ++ + T+ +M PE+
Sbjct: 159 LATRNCLVGANLL---------VKIGDFGMS---RDVYSTDYYRVGGHTMLPIRWMPPES 206
Query: 448 AGQTSSSGGGNTYR-ITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQI 505
YR T +SDVWS G IL+ + YG+ P+ + NT +++ +
Sbjct: 207 I----------MYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT--EVIECITQGRVL 254
Query: 506 EFKPQLANNVTIPPTLLQSMKLCLQKDPKAR 536
E +P++ P + M C Q++P+ R
Sbjct: 255 E-RPRVC-----PKEVYDVMLGCWQREPQQR 279
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 21/143 (14%)
Query: 341 EKGDTDLSKYMR----NLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANF 396
EKG LS +++ + N++ + TM + + +E + +K+ H I H D+K N
Sbjct: 105 EKGS--LSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNV 162
Query: 397 LFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGG 456
L N + CI DFG+A + K++ GT YM+PE G
Sbjct: 163 LLKNN---LTACIA------DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL-----EGA 208
Query: 457 GNTYRITY-KSDVWSLGCILYNM 478
N R + + D++++G +L+ +
Sbjct: 209 INFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 41/202 (20%)
Query: 289 KVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHL-YVLMEKGDTDL 347
K+ + DIT + + + E++++AK Q ++++ + D L YV M G
Sbjct: 55 KLAAMVDITTEELKQQFDQEIKVMAKCQH-ENLVELLGFSSDGDDLCLVYVYMPNGSL-- 111
Query: 348 SKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGI--------IHSDLKPANFLFV 399
L++++ L T + W+ M + + A GI IH D+K AN L
Sbjct: 112 ------LDRLSCLDGTPP---LSWH-MRCKIAQGAANGINFLHENHHIHRDIKSANILLD 161
Query: 400 GNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNT 459
KI DFG+A + + V GT YM+PEA
Sbjct: 162 EAF---------TAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL----------R 202
Query: 460 YRITYKSDVWSLGCILYNMIYG 481
IT KSD++S G +L +I G
Sbjct: 203 GEITPKSDIYSFGVVLLEIITG 224
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 24/118 (20%)
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
+ +++ V HA + H DLK N L G+ LKI DFG + K S
Sbjct: 121 FQQLISGVSYAHAMQVAHRDLKLENTLLDGSP-------APRLKIADFGYS------KAS 167
Query: 431 V---HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
V +A GT Y++PE + G +DVWS G LY M+ G P+
Sbjct: 168 VLHSQPKSAVGTPAYIAPEVLLKKEYDGK--------VADVWSCGVTLYVMLVGAYPF 217
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFG---IACSLQDDKT 429
E++ + +HA GI+H DLK N +F N G V+ I DFG I+ LQ +
Sbjct: 138 EIVKGMGYLHAKGILHKDLKSKN-VFYDN--------GKVV-ITDFGLFSISGVLQAGRR 187
Query: 430 SVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIP 489
+G L +++PE Q S + + SDV++LG I Y + P+ P
Sbjct: 188 EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP 247
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 373 EMLLAVKEIHAA-GIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
E++ A+ +H+ +++ DLK N + +D G++ KI DFG+ D ++
Sbjct: 259 EIVSALDYLHSEKNVVYRDLKLENLM--------LDKDGHI-KITDFGLCKEGIKDGATM 309
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
T GT Y++PE N Y D W LG ++Y M+ GR P+ + +
Sbjct: 310 --KTFCGTPEYLAPEVLED-------NDY--GRAVDWWGLGVVMYEMMCGRLPFYNQDHE 358
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNS 542
L + ++I F P+ T+ P + L+KDPK R G+
Sbjct: 359 KLFELILM---EEIRF-PR-----TLGPEAKSLLSGLLKKDPKQRLGGGSE 400
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 373 EMLLAVKEIHAA-GIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
E++ A+ +H+ +++ DLK N + +D G++ KI DFG+ D ++
Sbjct: 256 EIVSALDYLHSEKNVVYRDLKLENLM--------LDKDGHI-KITDFGLCKEGIKDGATM 306
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
T GT Y++PE N Y D W LG ++Y M+ GR P+ + +
Sbjct: 307 --KTFCGTPEYLAPEVLED-------NDY--GRAVDWWGLGVVMYEMMCGRLPFYNQDHE 355
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNS 542
L + ++I F P+ T+ P + L+KDPK R G+
Sbjct: 356 KLFELILM---EEIRF-PR-----TLGPEAKSLLSGLLKKDPKQRLGGGSE 397
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 20/118 (16%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
+M+ ++ IH+ IH D+KP NFL +G K GN++ IIDFG+A +D +T H
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFL-MGLGKK-----GNLVYIIDFGLAKKYRDARTHQH 164
Query: 433 -----KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+GT Y S S + D+ SLG +L G P+
Sbjct: 165 IPYRENKNLTGTARYASINTHLGIEQS---------RRDDLESLGYVLMYFNLGSLPW 213
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 68/163 (41%), Gaps = 44/163 (26%)
Query: 374 MLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHK 433
+ LA E+ IIH DLKP N L + + + +KI+DFG +C L +++
Sbjct: 152 LFLATPEL---SIIHCDLKPENIL-------LCNPKRSAIKIVDFGSSCQLGQ---RIYQ 198
Query: 434 DTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWA 493
S Y SPE G Y + D+WSLGCIL M G +S
Sbjct: 199 XIQSRF--YRSPEVLL-------GMPYDLAI--DMWSLGCILVEMHTGEPLFSG------ 241
Query: 494 KMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKAR 536
A DQ+ ++ + IPP + L + PKAR
Sbjct: 242 -----ANEVDQMN---KIVEVLGIPPAHI------LDQAPKAR 270
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 20/118 (16%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
+M+ ++ IH+ IH D+KP NFL +G K GN++ IIDFG+A +D +T H
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFL-MGLGKK-----GNLVYIIDFGLAKKYRDARTHQH 166
Query: 433 -----KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+GT Y S S + D+ SLG +L G P+
Sbjct: 167 IPYRENKNLTGTARYASINTHLGIEQS---------RRDDLESLGYVLMYFNLGSLPW 215
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 24/158 (15%)
Query: 329 YDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIH 388
Y+ +Y++ + + DL+ + N+ TL ++ M +L + IH I+H
Sbjct: 93 YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM----LLNGLYYIHRNKILH 148
Query: 389 SDLKPANFLFVGNVLKIIDCIGNVLKIIDFGI--ACSLQDDKTSVHKDTASGTLNYMSPE 446
D+K AN L + VLK+ DFG+ A SL + TL Y PE
Sbjct: 149 RDMKAANVLITRD---------GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTP 484
G D+W GCI+ M + R+P
Sbjct: 200 LLLGERDYGP--------PIDLWGAGCIMAEM-WTRSP 228
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 20/118 (16%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
+M+ ++ IH+ IH D+KP NFL +G K GN++ IIDFG+A +D +T H
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFL-MGLGKK-----GNLVYIIDFGLAKKYRDARTHQH 166
Query: 433 -----KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+GT Y S S + D+ SLG +L G P+
Sbjct: 167 IPYRENKNLTGTARYASINTHLGIEQS---------RRDDLESLGYVLMYFNLGSLPW 215
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 24/124 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVL------KI----IDCIGNVLKIIDFGIA 421
Y++ +V +H+ + H+DLKP N LFV + KI I +K++DFG A
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
DD+ H T +Y +PE S DVWS+GCIL G
Sbjct: 185 T--YDDE---HHSTLVXXRHYRAPEVILALGWSQ---------PCDVWSIGCILIEYYLG 230
Query: 482 RTPY 485
T +
Sbjct: 231 FTVF 234
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 22/117 (18%)
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
+ +++ V HA + H DLK N L G+ LKI DFG + S +
Sbjct: 121 FQQLISGVSYCHAMQVCHRDLKLENTLLDGSP-------APRLKICDFGYSKS-----SV 168
Query: 431 VHKDTAS--GTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+H S GT Y++PE + G +DVWS G LY M+ G P+
Sbjct: 169 LHSQPKSTVGTPAYIAPEVLLKKEYDGK--------VADVWSCGVTLYVMLVGAYPF 217
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 68/163 (41%), Gaps = 44/163 (26%)
Query: 374 MLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHK 433
+ LA E+ IIH DLKP N L + + + +KI+DFG +C L +++
Sbjct: 171 LFLATPEL---SIIHCDLKPENIL-------LCNPKRSAIKIVDFGSSCQLGQ---RIYQ 217
Query: 434 DTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNTWA 493
S Y SPE G Y + D+WSLGCIL M G +S
Sbjct: 218 XIQSRF--YRSPEVLL-------GMPYDLAI--DMWSLGCILVEMHTGEPLFSG------ 260
Query: 494 KMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKAR 536
A DQ+ ++ + IPP + L + PKAR
Sbjct: 261 -----ANEVDQMN---KIVEVLGIPPAHI------LDQAPKAR 289
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 22/115 (19%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
+++ V HA + H DLK N L G+ LKI DFG + S + +H
Sbjct: 122 QLISGVSYCHAMQVCHRDLKLENTLLDGSP-------APRLKICDFGYSKS-----SVLH 169
Query: 433 KDTAS--GTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
S GT Y++PE + G +DVWS G LY M+ G P+
Sbjct: 170 SQPKSTVGTPAYIAPEVLLKKEYDGK--------VADVWSCGVTLYVMLVGAYPF 216
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 108/279 (38%), Gaps = 37/279 (13%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLME-KGDT 345
+ V L T++ + D + E+E+L LQ ++K Y ++L ++ME
Sbjct: 44 VVAVKKLQHSTEEHLRD-FEREIEILKSLQH-DNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L +Y++ + I ++ + ++ ++ + IH DL N L
Sbjct: 102 SLREYLQKHKERID----HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE---- 153
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVH-KDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
N +KI DFG+ L DK K+ + + +PE+ ++ + +
Sbjct: 154 -----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES---------KFSV 199
Query: 465 KSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFK--PQLANNVTI----- 517
SDVWS G +LY + P + +M+ + I F L NN +
Sbjct: 200 ASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDG 259
Query: 518 -PPTLLQSMKLCLQKDPKARPTVGN---SVTQINNNPEG 552
P + M C + RP+ + V QI +N G
Sbjct: 260 CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 107/279 (38%), Gaps = 37/279 (13%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGD-T 345
+ V L T++ + D + E+E+L LQ ++K Y ++L ++ME
Sbjct: 46 VVAVKKLQHSTEEHLRD-FEREIEILKSLQH-DNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L Y++ + I ++ + ++ ++ + IH DL N L
Sbjct: 104 SLRDYLQKHKERID----HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE---- 155
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVH-KDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
N +KI DFG+ L DK K+ + + +PE+ ++ + +
Sbjct: 156 -----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES---------KFSV 201
Query: 465 KSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFK--PQLANNVTI----- 517
SDVWS G +LY + P + +M+ + I F L NN +
Sbjct: 202 ASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDG 261
Query: 518 -PPTLLQSMKLCLQKDPKARPTVGN---SVTQINNNPEG 552
P + M C + RP+ + V QI +N G
Sbjct: 262 CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 300
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 107/279 (38%), Gaps = 37/279 (13%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGD-T 345
+ V L T++ + D + E+E+L LQ ++K Y ++L ++ME
Sbjct: 48 VVAVKKLQHSTEEHLRD-FEREIEILKSLQH-DNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L Y++ + I ++ + ++ ++ + IH DL N L
Sbjct: 106 SLRDYLQKHKERID----HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE---- 157
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVH-KDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
N +KI DFG+ L DK K+ + + +PE+ ++ + +
Sbjct: 158 -----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES---------KFSV 203
Query: 465 KSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFK--PQLANNVTI----- 517
SDVWS G +LY + P + +M+ + I F L NN +
Sbjct: 204 ASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDG 263
Query: 518 -PPTLLQSMKLCLQKDPKARPTVGN---SVTQINNNPEG 552
P + M C + RP+ + V QI +N G
Sbjct: 264 CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 302
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
TM +I +++ ++ + ++H DL N I+ G +KI DFG++
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMSLVHRDLAARN---------ILVAEGRKMKISDFGLSR 198
Query: 423 SLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YG 481
+ ++ + V + + +M+ E+ + T +SDVWS G +L+ ++ G
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESL---------FDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 482 RTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
PY IP ++ + + ++E +P +N + + + M C +++P RP +
Sbjct: 250 GNPYPGIPPE--RLFNLLKTGHRME-RP---DNCS--EEMYRLMLQCWKQEPDKRPVFAD 301
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 24/113 (21%)
Query: 374 MLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHK 433
+ LA E+ IIH DLKP N L + + +KI+DFG +C L +++
Sbjct: 171 LFLATPEL---SIIHCDLKPENIL-------LCNPKRXAIKIVDFGSSCQLGQ---RIYQ 217
Query: 434 DTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
S Y SPE G Y + D+WSLGCIL M G +S
Sbjct: 218 XIQSRF--YRSPEVLL-------GMPYDLAI--DMWSLGCILVEMHTGEPLFS 259
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 373 EMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVH 432
E++ A+ +H GII+ DLK N L +D G+ K+ DFG+ C + V
Sbjct: 132 EIISALMFLHDKGIIYRDLKLDNVL--------LDHEGHC-KLADFGM-CK-EGICNGVT 180
Query: 433 KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYS 486
T GT +Y++PE + D W++G +LY M+ G P+
Sbjct: 181 TATFCGTPDYIAPEILQEMLYGPA---------VDWWAMGVLLYEMLCGHAPFE 225
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 107/279 (38%), Gaps = 37/279 (13%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGD-T 345
+ V L T++ + D + E+E+L LQ ++K Y ++L ++ME
Sbjct: 44 VVAVKKLQHSTEEHLRD-FEREIEILKSLQH-DNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L Y++ + I ++ + ++ ++ + IH DL N L
Sbjct: 102 SLRDYLQKHKERID----HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE---- 153
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVH-KDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
N +KI DFG+ L DK K+ + + +PE+ ++ + +
Sbjct: 154 -----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES---------KFSV 199
Query: 465 KSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFK--PQLANNVTI----- 517
SDVWS G +LY + P + +M+ + I F L NN +
Sbjct: 200 ASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDG 259
Query: 518 -PPTLLQSMKLCLQKDPKARPTVGN---SVTQINNNPEG 552
P + M C + RP+ + V QI +N G
Sbjct: 260 CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 30/181 (16%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQD--DKTSVHKDTASG 438
+HA IH L N L + L +KI DFG+A ++ + + V +D S
Sbjct: 127 LHAQHYIHRALAARNVLLDNDRL---------VKIGDFGLAKAVPEGHEYYRVREDGDSP 177
Query: 439 TLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY----GRTPYSH----IPN 490
Y +PE + + Y SDVWS G LY ++ ++P++ I +
Sbjct: 178 VFWY-APECLKEC---------KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGH 227
Query: 491 TWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
T +M + R + +E +L P + MK C + + RPT N V +
Sbjct: 228 TQGQM-TVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQ 286
Query: 551 E 551
E
Sbjct: 287 E 287
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 24/158 (15%)
Query: 329 YDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIH 388
Y+ +Y++ + + DL+ + N+ TL ++ M +L + IH I+H
Sbjct: 93 YNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM----LLNGLYYIHRNKILH 148
Query: 389 SDLKPANFLFVGNVLKIIDCIGNVLKIIDFGI--ACSLQDDKTSVHKDTASGTLNYMSPE 446
D+K AN L + VLK+ DFG+ A SL + TL Y PE
Sbjct: 149 RDMKAANVLITRD---------GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTP 484
G D+W GCI+ M + R+P
Sbjct: 200 LLLGERDYGP--------PIDLWGAGCIMAEM-WTRSP 228
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 30/181 (16%)
Query: 381 IHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQD--DKTSVHKDTASG 438
+HA IH L N L + L +KI DFG+A ++ + + V +D S
Sbjct: 128 LHAQHYIHRALAARNVLLDNDRL---------VKIGDFGLAKAVPEGHEYYRVREDGDSP 178
Query: 439 TLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY----GRTPYSH----IPN 490
Y +PE + + Y SDVWS G LY ++ ++P++ I +
Sbjct: 179 VFWY-APECLKEC---------KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGH 228
Query: 491 TWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNSVTQINNNP 550
T +M + R + +E +L P + MK C + + RPT N V +
Sbjct: 229 TQGQM-TVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQ 287
Query: 551 E 551
E
Sbjct: 288 E 288
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 37/180 (20%)
Query: 316 QGCPYVIKMHDYVYDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEML 375
+G P V Y + K+ +++E L ++ TL ++I I ++L
Sbjct: 57 EGLPQV-----YYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAI----QLL 107
Query: 376 LAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGN----VLKIIDFGIACSLQDDKTSV 431
++ +H+ +I+ D+KP NFL I GN V+ IIDFG+A D +T
Sbjct: 108 SRMEYVHSKNLIYRDVKPENFL--------IGRQGNKKEHVIHIIDFGLAKEYIDPETKK 159
Query: 432 H-----KDTASGTLNYMSPEA-AGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
H + +GT YMS G+ S + D+ +LG + + G P+
Sbjct: 160 HIPYREHKSLTGTARYMSINTHLGKEQSR----------RDDLEALGHMFMYFLRGSLPW 209
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 27/157 (17%)
Query: 386 IIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSP 445
++H DL N I+ G +KI DFG++ + ++ + V + + +M+
Sbjct: 171 LVHRDLAARN---------ILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAI 221
Query: 446 EAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQ 504
E+ + T +SDVWS G +L+ ++ G PY IP ++ + + +
Sbjct: 222 ESL---------FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE--RLFNLLKTGHR 270
Query: 505 IEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
+E +P +N + + + M C +++P RP +
Sbjct: 271 ME-RP---DNCS--EEMYRLMLQCWKQEPDKRPVFAD 301
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 20/131 (15%)
Query: 363 TMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIAC 422
++ ++M +M+ V+ +H+ +H D+KP NFL + N + IIDFG+A
Sbjct: 101 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMG------LGRRANQVYIIDFGLAK 154
Query: 423 SLQDDKTSVH-----KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYN 477
+D T H +GT Y S S + D+ SLG +L
Sbjct: 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQS---------RRDDLESLGYVLMY 205
Query: 478 MIYGRTPYSHI 488
+ G P+ +
Sbjct: 206 FLRGSLPWQGL 216
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 100/250 (40%), Gaps = 56/250 (22%)
Query: 307 NEVELLAKLQGCPYVIKMHDYVYD---TASKHLYVLME--KGDTDLSKYMRNLNKMTTLP 361
EVEL + CP+++++ D VY+ K L ++ME G S+ ++ T
Sbjct: 59 REVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 117
Query: 362 NTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIA 421
I+ + A++ +H+ I H D+KP N L+ I LK+ DFG A
Sbjct: 118 EASEIM----KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI------LKLTDFGFA 167
Query: 422 CSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
K+T G Y + D+WSLG I+Y ++ G
Sbjct: 168 -----------KETT--------------------GEKYDKS--CDMWSLGVIMYILLCG 194
Query: 482 RTP-YSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVG 540
P YS+ + + Q EF + V+ + +K+ ++ K PT
Sbjct: 195 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS------EEVKMLIRNLLKTEPTQR 248
Query: 541 NSVTQINNNP 550
++T+ N+P
Sbjct: 249 MTITEFMNHP 258
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 107/279 (38%), Gaps = 37/279 (13%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGD-T 345
+ V L T++ + D + E+E+L LQ ++K Y ++L ++ME
Sbjct: 41 VVAVKKLQHSTEEHLRD-FEREIEILKSLQH-DNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 346 DLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKI 405
L Y++ + I ++ + ++ ++ + IH DL N L
Sbjct: 99 SLRDYLQKHKERID----HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE---- 150
Query: 406 IDCIGNVLKIIDFGIACSLQDDKTSVH-KDTASGTLNYMSPEAAGQTSSSGGGNTYRITY 464
N +KI DFG+ L DK K+ + + +PE+ ++ + +
Sbjct: 151 -----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES---------KFSV 196
Query: 465 KSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFK--PQLANNVTI----- 517
SDVWS G +LY + P + +M+ + I F L NN +
Sbjct: 197 ASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDG 256
Query: 518 -PPTLLQSMKLCLQKDPKARPTVGN---SVTQINNNPEG 552
P + M C + RP+ + V QI +N G
Sbjct: 257 CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 20/128 (15%)
Query: 367 IIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQD 426
+ M +ML V+ IH +++ D+KP NFL + + N++ ++DFG+ +D
Sbjct: 107 VAMAAKQMLARVQSIHEKSLVYRDIKPDNFL----IGRPNSKNANMIYVVDFGMVKFYRD 162
Query: 427 DKTSVH-----KDTASGTLNYMSPEA-AGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY 480
T H K SGT YMS G+ S + D+ +LG + +
Sbjct: 163 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSR----------RDDLEALGHVFMYFLR 212
Query: 481 GRTPYSHI 488
G P+ +
Sbjct: 213 GSLPWQGL 220
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 30/170 (17%)
Query: 385 GIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMS 444
G++H +L N L + +++ DFG+A L D + A + +M+
Sbjct: 153 GMVHRNLAARNVLLKSP---------SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 445 PEAAGQTSSSGGGNTYRITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKD 503
E+ + + T++SDVWS G ++ M +G PY+ L +A D
Sbjct: 204 LESI---------HFGKYTHQSDVWSYGVTVWELMTFGAEPYAG--------LRLAEVPD 246
Query: 504 QIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT---VGNSVTQINNNP 550
+E +LA + M C D RPT + N T++ +P
Sbjct: 247 LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 296
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 24/158 (15%)
Query: 329 YDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIH 388
Y+ +Y++ + + DL+ + N+ TL ++ M +L + IH I+H
Sbjct: 92 YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM----LLNGLYYIHRNKILH 147
Query: 389 SDLKPANFLFVGNVLKIIDCIGNVLKIIDFGI--ACSLQDDKTSVHKDTASGTLNYMSPE 446
D+K AN L + VLK+ DFG+ A SL + TL Y PE
Sbjct: 148 RDMKAANVLITRD---------GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 198
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTP 484
G D+W GCI+ M + R+P
Sbjct: 199 LLLGERDYGP--------PIDLWGAGCIMAEM-WTRSP 227
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 107/283 (37%), Gaps = 45/283 (15%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK---G 343
+ V L T++ + D + E+E+L LQ ++K Y ++L ++ME G
Sbjct: 47 VVAVKKLQHSTEEHLRD-FEREIEILKSLQH-DNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 344 DTD--LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGN 401
L K+ ++ + L T ++ ++ + IH DL N L
Sbjct: 105 SLRDYLQKHKERIDHIKLLQYTS--------QICKGMEYLGTKRYIHRDLATRNILVENE 156
Query: 402 VLKIIDCIGNVLKIIDFGIACSLQDDKTSVH-KDTASGTLNYMSPEAAGQTSSSGGGNTY 460
N +KI DFG+ L DK K+ + + +PE+ ++
Sbjct: 157 ---------NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--------- 198
Query: 461 RITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFK--PQLANNVTI- 517
+ + SDVWS G +LY + P + +M+ + I F L NN +
Sbjct: 199 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 258
Query: 518 -----PPTLLQSMKLCLQKDPKARPTVGN---SVTQINNNPEG 552
P + M C + RP+ + V QI +N G
Sbjct: 259 RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 301
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 20/128 (15%)
Query: 367 IIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQD 426
+ M +ML V+ IH +++ D+KP NFL + + N++ ++DFG+ +D
Sbjct: 108 VAMAAKQMLARVQSIHEKSLVYRDIKPDNFL----IGRPNSKNANMIYVVDFGMVKFYRD 163
Query: 427 DKTSVH-----KDTASGTLNYMSPEA-AGQTSSSGGGNTYRITYKSDVWSLGCILYNMIY 480
T H K SGT YMS G+ S + D+ +LG + +
Sbjct: 164 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSR----------RDDLEALGHVFMYFLR 213
Query: 481 GRTPYSHI 488
G P+ +
Sbjct: 214 GSLPWQGL 221
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 24/158 (15%)
Query: 329 YDTASKHLYVLMEKGDTDLSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIH 388
Y+ +Y++ + + DL+ + N+ TL ++ M +L + IH I+H
Sbjct: 93 YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM----LLNGLYYIHRNKILH 148
Query: 389 SDLKPANFLFVGNVLKIIDCIGNVLKIIDFGI--ACSLQDDKTSVHKDTASGTLNYMSPE 446
D+K AN L + VLK+ DFG+ A SL + TL Y PE
Sbjct: 149 RDMKAANVLITRD---------GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 447 AAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTP 484
G D+W GCI+ M + R+P
Sbjct: 200 LLLGERDYGP--------PIDLWGAGCIMAEM-WTRSP 228
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 107/283 (37%), Gaps = 45/283 (15%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK---G 343
+ V L T++ + D + E+E+L LQ ++K Y ++L ++ME G
Sbjct: 45 VVAVKKLQHSTEEHLRD-FEREIEILKSLQH-DNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 344 DTD--LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGN 401
L K+ ++ + L T ++ ++ + IH DL N L
Sbjct: 103 SLRDYLQKHKERIDHIKLLQYTS--------QICKGMEYLGTKRYIHRDLATRNILVENE 154
Query: 402 VLKIIDCIGNVLKIIDFGIACSLQDDKTSVH-KDTASGTLNYMSPEAAGQTSSSGGGNTY 460
N +KI DFG+ L DK K+ + + +PE+ ++
Sbjct: 155 ---------NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--------- 196
Query: 461 RITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFK--PQLANNVTI- 517
+ + SDVWS G +LY + P + +M+ + I F L NN +
Sbjct: 197 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 256
Query: 518 -----PPTLLQSMKLCLQKDPKARPTVGN---SVTQINNNPEG 552
P + M C + RP+ + V QI +N G
Sbjct: 257 RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 299
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 107/283 (37%), Gaps = 45/283 (15%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK---G 343
+ V L T++ + D + E+E+L LQ ++K Y ++L ++ME G
Sbjct: 41 VVAVKKLQHSTEEHLRD-FEREIEILKSLQH-DNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 344 DTD--LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGN 401
L K+ ++ + L T ++ ++ + IH DL N L
Sbjct: 99 SLRDYLQKHKERIDHIKLLQYTS--------QICKGMEYLGTKRYIHRDLATRNILVENE 150
Query: 402 VLKIIDCIGNVLKIIDFGIACSLQDDKTSVH-KDTASGTLNYMSPEAAGQTSSSGGGNTY 460
N +KI DFG+ L DK K+ + + +PE+ ++
Sbjct: 151 ---------NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--------- 192
Query: 461 RITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFK--PQLANNVTI- 517
+ + SDVWS G +LY + P + +M+ + I F L NN +
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 252
Query: 518 -----PPTLLQSMKLCLQKDPKARPTVGN---SVTQINNNPEG 552
P + M C + RP+ + V QI +N G
Sbjct: 253 RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 107/283 (37%), Gaps = 45/283 (15%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK---G 343
+ V L T++ + D + E+E+L LQ ++K Y ++L ++ME G
Sbjct: 41 VVAVKKLQHSTEEHLRD-FEREIEILKSLQH-DNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 344 DTD--LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGN 401
L K+ ++ + L T ++ ++ + IH DL N L
Sbjct: 99 SLRDYLQKHKERIDHIKLLQYTS--------QICKGMEYLGTKRYIHRDLATRNILVENE 150
Query: 402 VLKIIDCIGNVLKIIDFGIACSLQDDKTSVH-KDTASGTLNYMSPEAAGQTSSSGGGNTY 460
N +KI DFG+ L DK K+ + + +PE+ ++
Sbjct: 151 ---------NRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES--------- 192
Query: 461 RITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFK--PQLANNVTI- 517
+ + SDVWS G +LY + P + +M+ + I F L NN +
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 252
Query: 518 -----PPTLLQSMKLCLQKDPKARPTVGN---SVTQINNNPEG 552
P + M C + RP+ + V QI +N G
Sbjct: 253 RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 20/138 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 166 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 215
Query: 472 GCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQ 530
G ++ M +G PY IP + ++ +I +++ P +V + M+ C
Sbjct: 216 GVTVWELMTFGSKPYDGIPAS--EISSILEKGERLPQPPICTIDVYM------IMRKCWM 267
Query: 531 KDPKARPTVGNSVTQINN 548
D +RP + + +
Sbjct: 268 IDADSRPKFRELIIEFSK 285
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 27/157 (17%)
Query: 386 IIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSP 445
++H DL N I+ G +KI DFG++ + ++ + V + + +M+
Sbjct: 171 LVHRDLAARN---------ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAI 221
Query: 446 EAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQ 504
E+ + T +SDVWS G +L+ ++ G PY IP ++ + + +
Sbjct: 222 ESL---------FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE--RLFNLLKTGHR 270
Query: 505 IEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGN 541
+E +P +N + + + M C +++P RP +
Sbjct: 271 ME-RP---DNCS--EEMYRLMLQCWKQEPDKRPVFAD 301
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 28/142 (19%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 205
Query: 472 GCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPT----LLQSMK 526
G ++ M +G PY IP + I+ ++ E PQ PP + M+
Sbjct: 206 GVTVWELMTFGSKPYDGIPAS-----EISSILEKGERLPQ-------PPICTIDVYMIMR 253
Query: 527 LCLQKDPKARPTVGNSVTQINN 548
C D +RP + + +
Sbjct: 254 KCWMIDADSRPKFRELIIEFSK 275
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 30/170 (17%)
Query: 385 GIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMS 444
G++H +L N L + +++ DFG+A L D + A + +M+
Sbjct: 135 GMVHRNLAARNVLLKSP---------SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 445 PEAAGQTSSSGGGNTYRITYKSDVWSLGCILYN-MIYGRTPYSHIPNTWAKMLAIARHKD 503
E+ + + T++SDVWS G ++ M +G PY+ L +A D
Sbjct: 186 LESI---------HFGKYTHQSDVWSYGVTVWELMTFGAEPYAG--------LRLAEVPD 228
Query: 504 QIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPT---VGNSVTQINNNP 550
+E +LA + M C D RPT + N T++ +P
Sbjct: 229 LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 190 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 239
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 240 GVTVWELMTFGSKPYDGIPAS 260
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 20/138 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 208
Query: 472 GCILYN-MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQ 530
G ++ M +G PY IP + ++ +I +++ P +V + M+ C
Sbjct: 209 GVTVWELMTFGSKPYDGIPAS--EISSILEKGERLPQPPICTIDVYM------IMRKCWM 260
Query: 531 KDPKARPTVGNSVTQINN 548
D +RP + + +
Sbjct: 261 IDADSRPKFRELIIEFSK 278
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 107/283 (37%), Gaps = 45/283 (15%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK---G 343
+ V L T++ + D + E+E+L LQ ++K Y ++L ++ME G
Sbjct: 59 VVAVKKLQHSTEEHLRD-FEREIEILKSLQH-DNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 344 DTD--LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGN 401
L K+ ++ + L T ++ ++ + IH DL N L
Sbjct: 117 SLRDYLQKHKERIDHIKLLQYTS--------QICKGMEYLGTKRYIHRDLATRNILVENE 168
Query: 402 VLKIIDCIGNVLKIIDFGIACSLQDDKTSVH-KDTASGTLNYMSPEAAGQTSSSGGGNTY 460
N +KI DFG+ L DK K+ + + +PE+ ++
Sbjct: 169 ---------NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--------- 210
Query: 461 RITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFK--PQLANNVTI- 517
+ + SDVWS G +LY + P + +M+ + I F L NN +
Sbjct: 211 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 270
Query: 518 -----PPTLLQSMKLCLQKDPKARPTVGN---SVTQINNNPEG 552
P + M C + RP+ + V QI +N G
Sbjct: 271 RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 313
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 205
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 206 GVTVWELMTFGSKPYDGIPAS 226
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 157 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 206
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 207 GVTVWELMTFGSKPYDGIPAS 227
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 162 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 211
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 212 GVTVWELMTFGSKPYDGIPAS 232
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 208
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 209 GVTVWELMTFGSKPYDGIPAS 229
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 212
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 213 GVTVWELMTFGSKPYDGIPAS 233
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 212
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 213 GVTVWELMTFGSKPYDGIPAS 233
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 205
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 206 GVTVWELMTFGSKPYDGIPAS 226
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 160 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 209
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 210 GVTVWELMTFGSKPYDGIPAS 230
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 205
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 206 GVTVWELMTFGSKPYDGIPAS 226
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 212
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 213 GVTVWELMTFGSKPYDGIPAS 233
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 158 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 207
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 208 GVTVWELMTFGSKPYDGIPAS 228
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 158 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 207
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 208 GVTVWELMTFGSKPYDGIPAS 228
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 157 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 206
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 207 GVTVWELMTFGSKPYDGIPAS 227
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 205
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 206 GVTVWELMTFGSKPYDGIPAS 226
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 208
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 209 GVTVWELMTFGSKPYDGIPAS 229
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 208
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 209 GVTVWELMTFGSKPYDGIPAS 229
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 33/157 (21%)
Query: 386 IIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSP 445
+H DL N L N+ V+KI DFG++ ++ + + +M P
Sbjct: 195 FVHRDLATRNCLVGENM---------VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP 245
Query: 446 EAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMI-YGRTPYSHIPNTWAKMLAIARHKDQ 504
E+ R T +SDVW+ G +L+ + YG PY + H++
Sbjct: 246 ESIFYN---------RYTTESDVWAYGVVLWEIFSYGLQPYYGMA-----------HEEV 285
Query: 505 IEFKPQ---LANNVTIPPTLLQSMKLCLQKDPKARPT 538
I + LA P L M+LC K P RP+
Sbjct: 286 IYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPS 322
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 181 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 230
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 231 GVTVWELMTFGSKPYDGIPAS 251
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 153 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 202
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 203 GVTVWELMTFGSKPYDGIPAS 223
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+ +L + +H IIH DLKP N L LK G +K+IDFG +C + V
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENIL-----LKQQGRSG--IKVIDFGSSCY---EHQRV 256
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
+ S Y +PE R D+WSLGCIL ++ G
Sbjct: 257 YXXIQSRF--YRAPEVILGA---------RYGMPIDMWSLGCILAELLTG 295
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 66/175 (37%), Gaps = 31/175 (17%)
Query: 386 IIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSVHKDTASGTLNYMSP 445
IIH D+K AN L ++ DFG+A L D K GT+ +++P
Sbjct: 163 IIHRDVKAANILLDEEFEAVVG---------DFGLA-KLMDYKDXHVXXAVRGTIGHIAP 212
Query: 446 EAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY--SHIPNT-------WAKML 496
E SS K+DV+ G +L +I G+ + + + N W K L
Sbjct: 213 EYLSTGKSS---------EKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 497 AIARHKDQIEFKPQLANNVTIPPT--LLQSMKLCLQKDPKARPTVGNSVTQINNN 549
+ K + L N L+Q LC Q P RP + V + +
Sbjct: 264 -LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 413 LKIIDFGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRI-TYKSDVWSL 471
+KI DFG+A L ++ H + + +M+ E+ +RI T++SDVWS
Sbjct: 150 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI----------LHRIYTHQSDVWSY 199
Query: 472 GCILYN-MIYGRTPYSHIPNT 491
G ++ M +G PY IP +
Sbjct: 200 GVTVWELMTFGSKPYDGIPAS 220
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 372 YEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
+ +L + +H IIH DLKP N L LK G +K+IDFG +C + V
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENIL-----LKQQGRSG--IKVIDFGSSCY---EHQRV 256
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYG 481
+ T + Y +PE R D+WSLGCIL ++ G
Sbjct: 257 Y--TXIQSRFYRAPEVILGA---------RYGMPIDMWSLGCILAELLTG 295
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 24/118 (20%)
Query: 371 WYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTS 430
+ +++ V HA + H DLK N L G+ LKI FG + S +
Sbjct: 121 FQQLISGVSYCHAMQVCHRDLKLENTLLDGSP-------APRLKICAFGYSKS-----SV 168
Query: 431 VH---KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPY 485
+H KDT GT Y++PE + G +DVWS G LY M+ G P+
Sbjct: 169 LHSQPKDTV-GTPAYIAPEVLLKKEYDGK--------VADVWSCGVTLYVMLVGAYPF 217
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 106/280 (37%), Gaps = 45/280 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK---G 343
+ V L T++ + D + E+E+L LQ ++K Y ++L ++ME G
Sbjct: 40 VVAVKKLQHSTEEHLRD-FEREIEILKSLQH-DNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 344 DTD--LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGN 401
L K+ ++ + L T ++ ++ + IH DL N L
Sbjct: 98 SLRDYLQKHKERIDHIKLLQYTS--------QICKGMEYLGTKRYIHRDLATRNILVENE 149
Query: 402 VLKIIDCIGNVLKIIDFGIACSLQDDKTSVH-KDTASGTLNYMSPEAAGQTSSSGGGNTY 460
N +KI DFG+ L DK K+ + + +PE+ ++
Sbjct: 150 ---------NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--------- 191
Query: 461 RITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFK--PQLANNVTI- 517
+ + SDVWS G +LY + P + +M+ + I F L NN +
Sbjct: 192 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 251
Query: 518 -----PPTLLQSMKLCLQKDPKARPTVGN---SVTQINNN 549
P + M C + RP+ + V QI +N
Sbjct: 252 RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 291
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 106/278 (38%), Gaps = 35/278 (12%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEKGDTD 346
+ V L T++ + D + E+E+L LQ ++K Y ++L ++ME
Sbjct: 44 VVAVKKLQHSTEEHLRD-FEREIEILKSLQH-DNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 347 LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKII 406
+R+ + I ++ + ++ ++ + IH DL N L
Sbjct: 102 ---SLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE----- 153
Query: 407 DCIGNVLKIIDFGIACSLQDDKTSVH-KDTASGTLNYMSPEAAGQTSSSGGGNTYRITYK 465
N +KI DFG+ L DK K+ + + +PE+ ++ + +
Sbjct: 154 ----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES---------KFSVA 200
Query: 466 SDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFK--PQLANNVTI------ 517
SDVWS G +LY + P + +M+ + I F L NN +
Sbjct: 201 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGC 260
Query: 518 PPTLLQSMKLCLQKDPKARPTVGN---SVTQINNNPEG 552
P + M C + RP+ + V QI +N G
Sbjct: 261 PDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 30/171 (17%)
Query: 373 EMLLAVKEIHAA-GIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
E++ A+ +H+ +++ DLK N + +D G++ KI DFG+ D ++
Sbjct: 116 EIVSALDYLHSEKNVVYRDLKLENLM--------LDKDGHI-KITDFGLCKEGIKDGATM 166
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
GT Y++PE N Y D W LG ++Y M+ GR P+ + +
Sbjct: 167 --KXFCGTPEYLAPEVLED-------NDY--GRAVDWWGLGVVMYEMMCGRLPFYNQDHE 215
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNS 542
L + ++I F P+ T+ P + L+KDPK R G+
Sbjct: 216 KLFELILM---EEIRF-PR-----TLGPEAKSLLSGLLKKDPKQRLGGGSE 257
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 368 IMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFG 419
I + E+L A+ +H+ G++++DLKP N + LK+ID +G V +I FG
Sbjct: 185 IAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLID-LGAVSRINSFG 235
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 30/171 (17%)
Query: 373 EMLLAVKEIHAA-GIIHSDLKPANFLFVGNVLKIIDCIGNVLKIIDFGIACSLQDDKTSV 431
E++ A+ +H+ +++ DLK N + +D G++ KI DFG+ D ++
Sbjct: 117 EIVSALDYLHSEKNVVYRDLKLENLM--------LDKDGHI-KITDFGLCKEGIKDGATM 167
Query: 432 HKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYNMIYGRTPYSHIPNT 491
GT Y++PE N Y D W LG ++Y M+ GR P+ + +
Sbjct: 168 --KXFCGTPEYLAPEVLED-------NDY--GRAVDWWGLGVVMYEMMCGRLPFYNQDHE 216
Query: 492 WAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARPTVGNS 542
L + ++I F P+ T+ P + L+KDPK R G+
Sbjct: 217 KLFELILM---EEIRF-PR-----TLGPEAKSLLSGLLKKDPKQRLGGGSE 258
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 34/182 (18%)
Query: 358 TTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGNVLKIIDCIGNVLKIID 417
+LP + + + LLA+ +H+ G++H D+KPAN +F+G + K+ D
Sbjct: 152 ASLPEAQVWGYLR--DTLLALAHLHSQGLVHLDVKPAN-IFLGPRGRC--------KLGD 200
Query: 418 FGIACSLQDDKTSVHKDTASGTLNYMSPEAAGQTSSSGGGNTYRITYKSDVWSLGCILYN 477
FG+ L T+ + G YM+PE + + +DV+SLG +
Sbjct: 201 FGLLVEL---GTAGAGEVQEGDPRYMAPELLQGSYGT----------AADVFSLGLTILE 247
Query: 478 MIYGRTPYSHIPNTWAKMLAIARHKDQIEFKPQLANNVTIPPTLLQSMKLCLQKDPKARP 537
+ H W ++ Q P+ ++ L + + L+ DPK R
Sbjct: 248 -VACNMELPHGGEGWQQL-------RQGYLPPEFTAGLS--SELRSVLVMMLEPDPKLRA 297
Query: 538 TV 539
T
Sbjct: 298 TA 299
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 106/280 (37%), Gaps = 45/280 (16%)
Query: 287 ALKVVDLSDITDQSIADSYLNEVELLAKLQGCPYVIKMHDYVYDTASKHLYVLMEK---G 343
+ V L T++ + D + E+E+L LQ ++K Y ++L ++ME G
Sbjct: 59 VVAVKKLQHSTEEHLRD-FEREIEILKSLQH-DNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 344 DTD--LSKYMRNLNKMTTLPNTMIIIIMHWYEMLLAVKEIHAAGIIHSDLKPANFLFVGN 401
L K+ ++ + L T ++ ++ + IH DL N L
Sbjct: 117 SLRDYLQKHKERIDHIKLLQYTS--------QICKGMEYLGTKRYIHRDLATRNILVENE 168
Query: 402 VLKIIDCIGNVLKIIDFGIACSLQDDKTSVH-KDTASGTLNYMSPEAAGQTSSSGGGNTY 460
N +KI DFG+ L DK K+ + + +PE+ ++
Sbjct: 169 ---------NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--------- 210
Query: 461 RITYKSDVWSLGCILYNMIYGRTPYSHIPNTWAKMLAIARHKDQIEFK--PQLANNVTI- 517
+ + SDVWS G +LY + P + +M+ + I F L NN +
Sbjct: 211 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 270
Query: 518 -----PPTLLQSMKLCLQKDPKARPTVGN---SVTQINNN 549
P + M C + RP+ + V QI +N
Sbjct: 271 RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 310
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.129 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,818,643
Number of Sequences: 62578
Number of extensions: 560590
Number of successful extensions: 3176
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 664
Number of HSP's that attempted gapping in prelim test: 1552
Number of HSP's gapped (non-prelim): 1094
length of query: 553
length of database: 14,973,337
effective HSP length: 104
effective length of query: 449
effective length of database: 8,465,225
effective search space: 3800886025
effective search space used: 3800886025
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 54 (25.4 bits)