Query psy14271
Match_columns 65
No_of_seqs 145 out of 1045
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 15:36:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14271.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14271hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g84_A Histidine--tRNA ligase, 99.7 1.6E-16 5.4E-21 101.3 6.5 64 2-65 399-462 (464)
2 4g85_A Histidine-tRNA ligase, 99.7 2.3E-16 7.9E-21 102.2 6.8 64 2-65 452-515 (517)
3 1evl_A Threonyl-tRNA synthetas 99.5 6.2E-14 2.1E-18 88.5 7.2 59 6-64 334-392 (401)
4 3ikl_A DNA polymerase subunit 99.5 1.1E-13 3.7E-18 89.3 7.4 58 6-63 390-447 (459)
5 3uh0_A Threonyl-tRNA synthetas 99.5 7E-14 2.4E-18 90.0 6.1 59 6-64 398-457 (460)
6 1v95_A Nuclear receptor coacti 99.4 4.9E-13 1.7E-17 74.1 6.8 58 6-63 46-105 (130)
7 4e51_A Histidine--tRNA ligase; 99.4 2.2E-13 7.6E-18 87.7 5.9 58 6-63 394-458 (467)
8 1g5h_A Mitochondrial DNA polym 99.4 2.7E-13 9.1E-18 87.3 5.9 58 6-63 380-437 (454)
9 1qf6_A THRRS, threonyl-tRNA sy 99.4 1E-12 3.6E-17 87.2 8.6 59 6-64 575-633 (642)
10 1nj8_A Proline-tRNA synthetase 99.4 2.7E-13 9.1E-18 87.2 5.5 58 6-63 322-379 (459)
11 2j3l_A Prolyl-tRNA synthetase; 99.4 1.2E-12 4.1E-17 85.6 8.2 57 6-64 509-565 (572)
12 1h4v_B Histidyl-tRNA synthetas 99.4 1.1E-12 3.7E-17 83.0 7.2 59 6-64 363-421 (421)
13 1nj1_A PROR, proline-tRNA synt 99.4 3.9E-13 1.3E-17 87.2 5.3 58 6-63 355-412 (501)
14 1htt_A Histidyl-tRNA synthetas 99.4 9.9E-13 3.4E-17 83.2 6.6 59 6-64 365-423 (423)
15 1nyr_A Threonyl-tRNA synthetas 99.4 1.1E-12 3.8E-17 86.9 7.1 59 6-64 582-640 (645)
16 1ati_A Glycyl-tRNA synthetase; 99.4 1.4E-12 4.8E-17 84.7 7.4 57 7-63 438-503 (505)
17 1hc7_A Prolyl-tRNA synthetase; 99.4 1.3E-12 4.4E-17 84.4 5.9 57 6-63 329-385 (477)
18 2zt5_A Glycyl-tRNA synthetase; 99.4 1.7E-12 5.9E-17 86.9 6.7 59 6-64 597-657 (693)
19 4hvc_A Bifunctional glutamate/ 99.3 1.3E-12 4.4E-17 85.3 5.8 58 7-64 356-413 (519)
20 1wu7_A Histidyl-tRNA synthetas 99.3 3E-12 1E-16 81.4 5.7 58 6-63 368-425 (434)
21 3lc0_A Histidyl-tRNA synthetas 99.3 2.1E-12 7E-17 83.1 4.1 50 6-55 397-446 (456)
22 3net_A Histidyl-tRNA synthetas 99.3 2.2E-12 7.4E-17 83.0 3.5 57 6-63 407-464 (465)
23 1qe0_A Histidyl-tRNA synthetas 99.3 6.9E-12 2.3E-16 79.2 5.7 55 6-60 365-419 (420)
24 2i4l_A Proline-tRNA ligase; al 99.2 2.2E-12 7.4E-17 82.8 2.4 54 6-59 404-457 (458)
25 3a32_A Probable threonyl-tRNA 99.2 1.7E-11 5.7E-16 78.9 4.4 58 6-63 381-446 (471)
26 3ial_A Prolyl-tRNA synthetase; 99.1 1E-10 3.4E-15 76.5 5.1 50 6-55 347-398 (518)
27 4evu_A Putative periplasmic pr 78.4 2.4 8.1E-05 20.9 2.7 27 13-39 40-66 (72)
28 1wn2_A Peptidyl-tRNA hydrolase 70.3 7.6 0.00026 20.7 3.7 35 8-42 67-103 (121)
29 1xty_A PTH, peptidyl-tRNA hydr 69.7 9.4 0.00032 20.2 4.0 34 8-41 66-101 (120)
30 4gqc_A Thiol peroxidase, perox 64.3 15 0.00051 19.8 4.7 31 34-64 130-160 (164)
31 1q7s_A BIT1, protein CGI-147; 61.2 15 0.0005 19.4 3.7 34 8-41 63-98 (117)
32 2lju_A Putative oxidoreductase 59.8 11 0.00038 19.9 3.0 20 8-27 68-87 (108)
33 2zv3_A PTH, peptidyl-tRNA hydr 59.2 15 0.0005 19.3 3.5 34 8-41 61-96 (115)
34 1rlk_A Hypothetical protein TA 59.0 18 0.00061 19.0 4.1 35 8-42 63-99 (117)
35 1rzw_A Protein AF2095(GR4); be 58.3 13 0.00044 19.9 3.2 35 8-42 60-96 (123)
36 3k8u_A Putative ABC transporte 56.4 21 0.00072 19.0 4.7 26 33-58 104-130 (156)
37 2jya_A AGR_C_3324P, uncharacte 53.0 13 0.00044 19.6 2.5 20 8-27 60-79 (106)
38 1hi9_A Dciaa, dipeptide transp 50.4 21 0.00072 21.7 3.5 47 15-61 140-196 (274)
39 1yo3_A Dynein light chain 1; s 46.5 23 0.0008 18.2 2.9 20 9-30 55-74 (102)
40 3rjs_A Dynein light chain moto 42.9 22 0.00076 17.7 2.4 20 9-30 42-61 (89)
41 3zua_A CLD, alpha-hemolysin tr 42.7 36 0.0012 17.7 4.6 24 35-58 99-122 (142)
42 3qst_A Triosephosphate isomera 39.8 18 0.00062 21.7 2.1 27 6-32 108-134 (255)
43 4ds1_A Dynein light chain 1, c 38.7 28 0.00095 17.7 2.4 20 9-30 50-69 (97)
44 2v5b_A Triosephosphate isomera 38.7 30 0.001 20.7 2.9 26 7-32 101-126 (244)
45 2jna_A Putative secreted prote 38.6 37 0.0013 17.6 2.9 27 12-39 60-86 (104)
46 3th6_A Triosephosphate isomera 37.4 25 0.00086 21.0 2.4 26 6-31 106-131 (249)
47 1tre_A Triosephosphate isomera 37.4 32 0.0011 20.7 2.9 27 6-32 106-132 (255)
48 3ta6_A Triosephosphate isomera 37.2 32 0.0011 20.9 2.9 26 7-32 112-137 (267)
49 3mu7_A XAIP-II, xylanase and a 37.0 34 0.0011 20.7 2.9 24 7-30 54-77 (273)
50 2jgq_A Triosephosphate isomera 36.9 33 0.0011 20.3 2.9 25 7-31 101-125 (233)
51 4g1k_A Triosephosphate isomera 36.7 39 0.0013 20.5 3.2 26 6-31 131-156 (272)
52 1r2r_A TIM, triosephosphate is 36.6 33 0.0011 20.5 2.9 26 7-32 107-132 (248)
53 2i9e_A Triosephosphate isomera 36.4 22 0.00075 21.4 2.1 26 7-32 106-131 (259)
54 1b9b_A TIM, protein (triosepho 36.3 22 0.00076 21.4 2.1 26 7-32 108-133 (255)
55 3kxq_A Triosephosphate isomera 36.2 40 0.0014 20.5 3.2 26 6-31 131-156 (275)
56 1o5x_A TIM, triosephosphate is 36.2 34 0.0012 20.5 2.9 26 7-32 107-132 (248)
57 2ohw_A YUEI protein; structura 36.1 27 0.00091 18.9 2.2 21 8-28 77-97 (133)
58 2vxn_A Triosephosphate isomera 35.9 35 0.0012 20.5 2.9 26 7-32 108-133 (251)
59 2yzh_A Probable thiol peroxida 35.7 51 0.0017 17.4 3.9 38 21-62 133-170 (171)
60 1ney_A TIM, triosephosphate is 35.6 35 0.0012 20.4 2.9 26 7-32 106-131 (247)
61 3s6d_A Putative triosephosphat 35.3 49 0.0017 20.6 3.5 27 7-33 160-186 (310)
62 1aw2_A Triosephosphate isomera 34.4 33 0.0011 20.6 2.6 26 7-32 109-134 (256)
63 3krs_A Triosephosphate isomera 34.3 45 0.0015 20.3 3.2 27 6-32 129-155 (271)
64 1mo0_A TIM, triosephosphate is 34.2 38 0.0013 20.6 2.9 25 7-31 126-150 (275)
65 3erv_A Putative C39-like pepti 33.9 74 0.0025 18.8 4.9 25 35-59 188-213 (236)
66 2yc6_A Triosephosphate isomera 33.9 26 0.00088 21.1 2.1 26 7-32 108-133 (257)
67 3m9y_A Triosephosphate isomera 33.7 47 0.0016 19.9 3.2 25 7-31 110-134 (254)
68 1ta3_A XIP-1, xylanase inhibit 33.7 41 0.0014 20.2 3.0 23 8-30 58-80 (274)
69 2j27_A Triosephosphate isomera 33.6 35 0.0012 20.4 2.6 26 7-32 107-132 (250)
70 2cxh_A Probable BRIX-domain ri 32.9 75 0.0026 18.5 4.3 40 6-45 69-108 (217)
71 2btm_A TIM, protein (triosepho 32.7 45 0.0015 20.0 3.0 26 7-32 106-131 (252)
72 1yya_A Triosephosphate isomera 32.6 50 0.0017 19.7 3.2 26 7-32 106-131 (250)
73 1m6j_A TIM, TPI, triosephospha 32.5 37 0.0013 20.4 2.6 25 7-31 114-138 (261)
74 1yx1_A Hypothetical protein PA 32.1 49 0.0017 18.8 3.1 22 7-28 84-105 (264)
75 2jsy_A Probable thiol peroxida 30.6 62 0.0021 16.8 4.4 38 22-63 129-166 (167)
76 2noc_A Putative periplasmic pr 30.4 26 0.00089 18.0 1.5 20 12-31 58-77 (99)
77 4axn_A Chitinase C1; hydrolase 27.9 54 0.0018 19.8 2.8 24 7-30 83-106 (328)
78 1cnv_A Concanavalin B; plant c 27.1 60 0.002 19.7 2.9 25 7-31 63-87 (299)
79 1i60_A IOLI protein; beta barr 27.1 66 0.0022 18.1 3.0 21 8-28 85-105 (278)
80 1wcu_A CBM29_1, non-catalytic 26.8 83 0.0028 17.1 3.2 21 25-45 36-56 (153)
81 2uy2_A Endochitinase; carbohyd 26.6 67 0.0023 19.4 3.0 24 8-31 67-90 (294)
82 4ac1_X Endo-N-acetyl-beta-D-gl 26.2 68 0.0023 19.1 3.0 23 8-30 63-85 (283)
83 3fkf_A Thiol-disulfide oxidore 25.9 69 0.0024 15.9 4.4 35 18-64 112-146 (148)
84 4g2e_A Peroxiredoxin; redox pr 25.7 80 0.0027 16.5 4.1 28 34-61 128-155 (157)
85 3lor_A Thiol-disulfide isomera 25.6 74 0.0025 16.1 5.4 38 19-65 119-156 (160)
86 3fw2_A Thiol-disulfide oxidore 25.3 75 0.0026 16.1 4.2 34 19-64 115-148 (150)
87 3eyt_A Uncharacterized protein 25.3 76 0.0026 16.1 5.5 38 18-64 115-152 (158)
88 2xtk_A CHIA1, class III chitin 25.2 64 0.0022 19.6 2.8 25 7-31 74-98 (310)
89 3cqj_A L-ribulose-5-phosphate 25.0 58 0.002 18.8 2.6 22 8-29 109-130 (295)
90 3iab_B Ribonucleases P/MRP pro 24.9 78 0.0027 17.4 2.9 21 9-29 48-68 (140)
91 3icu_A E3 ubiquitin-protein li 24.9 87 0.003 18.0 3.2 24 7-30 116-139 (194)
92 4gel_A Mitochondrial cardiolip 24.9 47 0.0016 18.5 2.1 27 2-29 80-106 (220)
93 3jyw_G 60S ribosomal protein L 24.4 30 0.001 18.2 1.1 19 14-32 62-80 (113)
94 3lwa_A Secreted thiol-disulfid 24.1 88 0.003 16.5 5.6 38 19-65 145-182 (183)
95 1w0m_A TIM, triosephosphate is 23.8 74 0.0025 18.6 2.8 24 9-32 103-126 (226)
96 2f9i_B Acetyl-coenzyme A carbo 23.7 54 0.0018 19.9 2.3 22 7-28 143-164 (285)
97 1l7b_A DNA ligase; BRCT, autos 23.7 16 0.00055 18.4 -0.1 16 8-23 53-68 (92)
98 2f9y_B Acetyl-coenzyme A carbo 23.6 48 0.0016 20.2 2.0 23 7-29 140-162 (304)
99 3aam_A Endonuclease IV, endoiv 23.6 68 0.0023 18.2 2.6 20 8-27 89-108 (270)
100 1hg3_A Triosephosphate isomera 23.5 67 0.0023 18.8 2.6 24 9-32 106-129 (225)
101 3obe_A Sugar phosphate isomera 23.3 65 0.0022 19.0 2.6 21 8-28 115-135 (305)
102 3p6l_A Sugar phosphate isomera 23.2 79 0.0027 17.8 2.9 22 7-28 91-112 (262)
103 1qtw_A Endonuclease IV; DNA re 23.2 79 0.0027 17.9 2.9 20 8-27 90-109 (285)
104 2hq2_A Putative heme/hemoglobi 22.8 1.5E+02 0.0052 18.7 4.4 32 6-41 235-266 (354)
105 4ggj_A Mitochondrial cardiolip 22.5 76 0.0026 17.7 2.6 23 6-28 71-93 (196)
106 3ayv_A Putative uncharacterize 22.5 84 0.0029 17.6 2.9 20 8-27 77-96 (254)
107 3keb_A Probable thiol peroxida 22.4 1.2E+02 0.0042 17.5 4.7 37 21-61 137-173 (224)
108 3iz5_H 60S ribosomal protein L 22.3 24 0.00084 21.4 0.5 43 15-59 165-214 (258)
109 2x7v_A Probable endonuclease 4 22.3 75 0.0025 18.1 2.6 20 8-27 90-109 (287)
110 3kpb_A Uncharacterized protein 22.1 51 0.0017 16.0 1.7 24 6-29 78-101 (122)
111 1pfk_A Phosphofructokinase; tr 22.1 82 0.0028 19.5 2.9 24 9-32 83-106 (320)
112 1byr_A Protein (endonuclease); 22.1 93 0.0032 16.0 2.9 25 6-30 39-63 (155)
113 2hvm_A Hevamine; hydrolase, ch 22.0 1E+02 0.0036 18.3 3.3 24 7-30 58-81 (273)
114 3cny_A Inositol catabolism pro 21.9 86 0.0029 17.9 2.9 20 8-27 91-110 (301)
115 2q8u_A Exonuclease, putative; 21.9 90 0.0031 18.6 3.0 21 9-29 50-70 (336)
116 3ian_A Chitinase; structural g 21.8 82 0.0028 19.1 2.8 24 8-31 67-90 (321)
117 1zxx_A 6-phosphofructokinase; 21.7 85 0.0029 19.4 2.9 24 9-32 82-105 (319)
118 2nxf_A Putative dimetal phosph 21.6 89 0.003 17.8 2.9 22 9-30 40-61 (322)
119 2cok_A Poly [ADP-ribose] polym 21.3 66 0.0023 16.7 2.1 15 9-23 60-74 (113)
120 3lmz_A Putative sugar isomeras 21.0 83 0.0028 17.8 2.6 21 7-27 89-109 (257)
121 2y8v_A CHIC, class III chitina 20.8 1E+02 0.0035 18.3 3.0 23 8-30 73-95 (290)
122 3nqr_A Magnesium and cobalt ef 20.8 59 0.002 16.1 1.8 25 6-30 84-108 (127)
123 2q02_A Putative cytoplasmic pr 20.4 88 0.003 17.6 2.7 22 8-29 86-107 (272)
124 2gsj_A Protein PPL-2; mimosoid 20.4 1.1E+02 0.0037 18.2 3.1 24 7-30 58-81 (271)
125 1ii7_A MRE11 nuclease; RAD50, 20.2 1.1E+02 0.0039 18.2 3.2 21 10-30 30-50 (333)
126 3aal_A Probable endonuclease 4 20.1 86 0.0029 18.2 2.6 20 8-27 95-114 (303)
127 2j0p_A HEMS, hemin transport p 20.1 1.7E+02 0.0056 18.4 3.9 31 6-40 226-256 (345)
128 3kws_A Putative sugar isomeras 20.1 99 0.0034 17.7 2.9 20 8-27 105-124 (287)
No 1
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=99.66 E-value=1.6e-16 Score=101.27 Aligned_cols=64 Identities=44% Similarity=0.782 Sum_probs=59.7
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHhhC
Q psy14271 2 SYKKNPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKLKE 65 (65)
Q Consensus 2 ~~~~~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~~~ 65 (65)
+|..+.++++||++|++.|+||+||||++|.++|+|+||||.+++|..++++++++.|+..++|
T Consensus 399 ~~~~~~~l~~q~k~A~~~g~~~~viiG~~E~~~g~v~vK~l~tgeq~~v~~~elv~~lk~~l~~ 462 (464)
T 4g84_A 399 LYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 462 (464)
T ss_dssp CSCSSCCHHHHHHHHHHHTCCEEEECCHHHHHHTEEEEEETTTCCEEEEEGGGHHHHHHHHHTC
T ss_pred EeCCCCCHHHHHHHHHHCCCCEEEEECchhhhCCEEEEEECCCCCeEEeeHHHHHHHHHHHhcC
Confidence 4554568999999999999999999999999999999999999999999999999999998875
No 2
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=99.65 E-value=2.3e-16 Score=102.16 Aligned_cols=64 Identities=44% Similarity=0.782 Sum_probs=59.1
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHhhC
Q psy14271 2 SYKKNPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKLKE 65 (65)
Q Consensus 2 ~~~~~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~~~ 65 (65)
+|..+.++++||++|++.|+||+||||++|.++|+|+||+|.+++|..++++++++.|+..++|
T Consensus 452 ~~~~~~~l~~q~k~A~~~g~~~~viiG~~E~~~g~v~vK~l~tgeq~~v~~~elv~~lk~~l~~ 515 (517)
T 4g85_A 452 LYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 515 (517)
T ss_dssp CSSSSCCHHHHHHHHHHHCCCEEEEECHHHHHTTEEEEEETTTCCEEEEEHHHHHHHHHHHCC-
T ss_pred EeCCCCCHHHHHHHHHHCCCCEEEEECChhHhCCEEEEEECCCCCeEEeeHHHHHHHHHHHhcC
Confidence 3555678999999999999999999999999999999999999999999999999999998875
No 3
>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A*
Probab=99.50 E-value=6.2e-14 Score=88.46 Aligned_cols=59 Identities=17% Similarity=0.345 Sum_probs=55.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHhh
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKLK 64 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~~ 64 (65)
+.++++||++|++.|+||+|+||++|.++|+|+||++.+++|..++++++++.+...++
T Consensus 334 ~~~~~~k~~~A~~~g~p~~iiiG~~e~~~~~v~vk~~~~~~q~~v~~~el~~~l~~~~~ 392 (401)
T 1evl_A 334 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIR 392 (401)
T ss_dssp SSCHHHHHHHHHHTTCSEEEEECHHHHHHTEEEEEETTSCEEEEEEHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcCCCEEEEECcchhhCCeEEEEECCCCceEEeeHHHHHHHHHHHHh
Confidence 57999999999999999999999999999999999999999999999999998876554
No 4
>3ikl_A DNA polymerase subunit gamma-2, mitochondrial; transferase; HET: DNA; 3.10A {Homo sapiens}
Probab=99.48 E-value=1.1e-13 Score=89.27 Aligned_cols=58 Identities=19% Similarity=0.260 Sum_probs=54.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHh
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKL 63 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~ 63 (65)
+.++++||++|+..|+||+|+||++|+++|+|+||+++++++..++++++++.|...+
T Consensus 390 ~~siGkK~r~Ad~iGiPy~IiVG~kEle~g~VtVR~Rdtgeq~~v~ldeli~~l~~~i 447 (459)
T 3ikl_A 390 QSSLEQLYSKYDEMSILFTVLVTETTLENGLIHLRSRDTTMKEMMHISKLKDFLIKYI 447 (459)
T ss_dssp CCTTHHHHHHHGGGTCSEEEEECTTSTTSSEEEEEETTTCCCCCEETTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCEEEEECchhhhCCEEEEEECCCCceEEEEHHHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999887654
No 5
>3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A*
Probab=99.48 E-value=7e-14 Score=90.02 Aligned_cols=59 Identities=15% Similarity=0.227 Sum_probs=55.9
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCc-eeeecHHHHHHHHHHHhh
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTRE-EETISRDKLLDTLQEKLK 64 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~-~~~~~~~e~~~~i~~~~~ 64 (65)
+.++++||++|++.|+||+|+||++|+++|+|+||++++++ +..++++++++.+...+.
T Consensus 398 ~~~lg~k~r~Ad~~g~p~~ivvG~~E~~~g~Vtvr~r~~~e~q~~v~~~el~~~l~~~~~ 457 (460)
T 3uh0_A 398 NEPVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIRERDNRKSFEKLTMSQIWEKFIELEK 457 (460)
T ss_dssp SSCHHHHHHHHHHHTCSEEEEECHHHHHHTCEEEEEGGGTTSCEEECHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCEEEEEcchhhhCCeEEEEECCCCceeEEeeHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999 999999999999887664
No 6
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=99.43 E-value=4.9e-13 Score=74.08 Aligned_cols=58 Identities=14% Similarity=0.185 Sum_probs=53.0
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCC--CceeeecHHHHHHHHHHHh
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLT--REEETISRDKLLDTLQEKL 63 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~--~~~~~~~~~e~~~~i~~~~ 63 (65)
+.+|+++++.|...++||+++||++|.++++|+|+.+.. +++..+|+++++..|...+
T Consensus 46 ~e~Lg~kIR~a~~~kvPy~lVVG~kE~e~~sVsVR~r~~~~~e~~~m~lde~i~~l~~~~ 105 (130)
T 1v95_A 46 EVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQEHRNMPQADAMVLVARNY 105 (130)
T ss_dssp SSCHHHHHHHHHHHTCSEEEEECHHHHHHTEEEEEECSSSCCEEEEEEHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHcCCCEEEEEechHHhcCeeEEEecCCCCCccCccCHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999877 7778999999998886543
No 7
>4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis}
Probab=99.43 E-value=2.2e-13 Score=87.67 Aligned_cols=58 Identities=9% Similarity=0.310 Sum_probs=52.1
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCC-C------ceeeecHHHHHHHHHHHh
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLT-R------EEETISRDKLLDTLQEKL 63 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~-~------~~~~~~~~e~~~~i~~~~ 63 (65)
+.++++|+++|++.|+||+||||++|.++|+|+||++.+ + +|..++++++++.++..+
T Consensus 394 ~~sl~kq~~~A~~~g~~~~iiiG~~E~~~g~V~vk~~~~~~~~~~~~~q~~v~~~elv~~l~~~~ 458 (467)
T 4e51_A 394 GASFKSQMKRADASGAAFAVIFGEDEVTNGTASVKPLRGTGDDGEKSVQQSVPVESLTEFLINAM 458 (467)
T ss_dssp CCCHHHHHHHHHHTTCSEEEEECHHHHHHTEEEEEEC---------CCCEEEEGGGHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCEEEEECcchhhCCeEEEEECCCCCCCCCcccceEEcHHHHHHHHHHHh
Confidence 589999999999999999999999999999999999998 8 899999999999987665
No 8
>1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} SCOP: c.51.1.1 d.104.1.1 PDB: 1g5i_A 2g4c_A* 3ikm_B*
Probab=99.42 E-value=2.7e-13 Score=87.26 Aligned_cols=58 Identities=19% Similarity=0.264 Sum_probs=54.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHh
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKL 63 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~ 63 (65)
+.++++||++|++.|+||+|+||++|+++|+|+||++.++++..++++++++.+...+
T Consensus 380 ~~sigkk~r~Ad~~GiP~~IiVG~~Ele~g~VtvR~r~t~eq~~v~l~el~~~l~~~l 437 (454)
T 1g5h_A 380 HSSLEQLHSKYDEMSVLFSVLVTETTLENGLIQLRSRDTTMKEMMHISKLRDFLVKYL 437 (454)
T ss_dssp CSCHHHHHHHHHHTTCSEEEEECHHHHHHCEEEEEETTTCCEEEEETTSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCEEEEECcchhhCCEEEEEECCCCcEEEEEHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999998886654
No 9
>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1
Probab=99.41 E-value=1e-12 Score=87.18 Aligned_cols=59 Identities=17% Similarity=0.345 Sum_probs=55.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHhh
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKLK 64 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~~ 64 (65)
+.+++++|++|+..|+||+|+||++|.++|+|+||++.++++..++++++++.+...+.
T Consensus 575 ~~~~g~kir~a~~~g~p~~ivvG~~E~~~~~V~vr~r~~~~~~~v~~~e~~~~l~~~~~ 633 (642)
T 1qf6_A 575 NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIR 633 (642)
T ss_dssp SSCHHHHHHHHHHTTCSEEEEECTTTGGGCCEEEEESSSCEEEEECHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCEEEEECchhhhcCeEEEEECCCCceEEEEHHHHHHHHHHHHh
Confidence 57999999999999999999999999999999999999999999999999998876554
No 10
>1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1
Probab=99.41 E-value=2.7e-13 Score=87.20 Aligned_cols=58 Identities=14% Similarity=0.216 Sum_probs=54.1
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHh
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKL 63 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~ 63 (65)
+.++++||++|++.|+||+|+||++|+++|+|+||++.++++..++++++++.+...+
T Consensus 322 ~~~~g~k~~~a~~~G~p~~iiiG~~el~~~~V~vr~r~t~eq~~v~~~el~~~l~~~l 379 (459)
T 1nj8_A 322 DIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLMEVVEKTL 379 (459)
T ss_dssp CSCHHHHHHHHHHTTCSEEEEECHHHHHTTEEEEEETTTCCEEEEETTSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCEEEEECcchhcCCEEEEEECCCCceEEEeHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999988876544
No 11
>2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A*
Probab=99.40 E-value=1.2e-12 Score=85.56 Aligned_cols=57 Identities=18% Similarity=0.140 Sum_probs=53.6
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHhh
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKLK 64 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~~ 64 (65)
+.++++||++|++.|+||+|+||++| ++|+|+||++.+++|..++++++++.+. .+.
T Consensus 509 ~~~~g~k~~~a~~~g~p~~iivG~~e-~~~~v~vk~~~~~~q~~v~~~~l~~~l~-~~~ 565 (572)
T 2j3l_A 509 NERAGVKFADADLIGCPIRITVGKKA-VDGVVEVKIKRTGEMLEVRKEELESTLS-ILM 565 (572)
T ss_dssp SCCHHHHHHHHHHHCCSEEEEECGGG-GGTEEEEEETTTCCEEEEEHHHHHHHHH-HHC
T ss_pred CCCHhHHHHHHHhcCCCEEEEEcccc-cCCeEEEEEcCCCcEEEEeHHHHHHHHH-HHh
Confidence 57999999999999999999999999 9999999999999999999999999887 653
No 12
>1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A
Probab=99.39 E-value=1.1e-12 Score=82.97 Aligned_cols=59 Identities=22% Similarity=0.284 Sum_probs=55.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHhh
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKLK 64 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~~ 64 (65)
+.+++++|++|++.|+||+|+||++|.++|+|+||++.++++..++++++++.+...++
T Consensus 363 ~~~~~~~~~~a~~~g~p~~iivG~~e~~~~~v~vk~~~~~~~~~v~~~el~~~l~~~l~ 421 (421)
T 1h4v_B 363 PRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQVRLSREEVPGYLLQALG 421 (421)
T ss_pred CCCHHHHHHHHHhCCCCEEEEECchHhhcCcEEEEECCCCCceEECHHHHHHHHHHhhC
Confidence 57999999999999999999999999999999999999999999999999999877653
No 13
>1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A*
Probab=99.39 E-value=3.9e-13 Score=87.25 Aligned_cols=58 Identities=17% Similarity=0.150 Sum_probs=54.1
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHh
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKL 63 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~ 63 (65)
+.++++||++|++.|+||+|+||++|+++|+|+||++.++++..++++++++.+...+
T Consensus 355 ~~s~g~k~~~a~~~G~p~~iiiG~~e~~~~~V~vr~r~t~eq~~v~~~el~~~l~~~l 412 (501)
T 1nj1_A 355 DIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVISRRDTGEKVTADLQGIEETLRELM 412 (501)
T ss_dssp SSCHHHHHHHHHHEECSEEEEECHHHHTTTEEEEEESSSCCEEEEETTTHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcCCCEEEEECcchhhCCEEEEEECCCCceEEEeHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999988876554
No 14
>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A*
Probab=99.38 E-value=9.9e-13 Score=83.16 Aligned_cols=59 Identities=17% Similarity=0.327 Sum_probs=55.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHhh
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKLK 64 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~~ 64 (65)
+.+++++|++|++.|+||+|+||++|.++|+|+||++.++++..++++++++.+...++
T Consensus 365 ~~~~~~~~~~a~~~g~p~~iiiG~~e~~~~~v~vk~~~~~~~~~v~~~el~~~l~~~~~ 423 (423)
T 1htt_A 365 GGNFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLRTLLG 423 (423)
T ss_dssp CCCHHHHHHHHHHHTCSEEEEECHHHHHHTEEEEEETTTCCEEEEEHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHcCCCEEEEECchhhhcCeEEEEECCCCCceEEcHHHHHHHHHHhhC
Confidence 57999999999999999999999999999999999999999999999999999877653
No 15
>1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A*
Probab=99.38 E-value=1.1e-12 Score=86.91 Aligned_cols=59 Identities=24% Similarity=0.469 Sum_probs=55.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHhh
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKLK 64 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~~ 64 (65)
+.+++++|++|++.|+||+|+||++|.++|+|+||++.++++..++++++++.+...++
T Consensus 582 ~~~~g~k~~~a~~~g~p~~iivG~~e~~~~~V~vr~r~~~~~~~v~~~e~~~~l~~~~~ 640 (645)
T 1nyr_A 582 NEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDEIR 640 (645)
T ss_dssp SCCHHHHHHHHHHHTCSEEEEECHHHHHTTEEEEEETTSSCCCEEEHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcCCCEEEEEccchhhCCEEEEEECCCCcEEEEEHHHHHHHHHHHHh
Confidence 57999999999999999999999999999999999999999999999999998876654
No 16
>1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A*
Probab=99.38 E-value=1.4e-12 Score=84.73 Aligned_cols=57 Identities=16% Similarity=0.258 Sum_probs=54.3
Q ss_pred CCHHHHHHHhhhcCCcEEEEEcccccc---------cCeEEEEEcCCCceeeecHHHHHHHHHHHh
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSELA---------SNSVKLRNVLTREEETISRDKLLDTLQEKL 63 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E~~---------~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~ 63 (65)
.++++||++|++.|+||+|+||++|++ +|+|+||++.+++|..++++++++.+...+
T Consensus 438 ~sig~k~~~ad~~g~p~~iivG~~el~~~~~~~~~~~g~V~vr~r~t~~q~~v~~~el~~~l~~~l 503 (505)
T 1ati_A 438 GNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKDTVTVRDRDTMEQIRLHVDELEGFLRERL 503 (505)
T ss_dssp SCHHHHHHHHHHTTCSEEEEECHHHHTCCTTSCCTTTTEEEEEETTTCCEEEEEHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCEEEEEChHHhhhccccccccCCEEEEEECCCCceEEEEHHHHHHHHHHHh
Confidence 789999999999999999999999999 999999999999999999999999887655
No 17
>1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A
Probab=99.35 E-value=1.3e-12 Score=84.43 Aligned_cols=57 Identities=19% Similarity=0.223 Sum_probs=53.0
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHh
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKL 63 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~ 63 (65)
+.++++||++|++.|+||+|+||++|+++|+|+||++. +++..++++++++.+...+
T Consensus 329 ~~s~g~k~~~a~~~G~p~~iiiG~~el~~~~V~vr~r~-~eq~~v~~~el~~~l~~~l 385 (477)
T 1hc7_A 329 QHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRL-GGKETLPLAALPEALPGKL 385 (477)
T ss_dssp SSCHHHHHHHHHHTTCSEEEEECHHHHHTTEEEEEETT-SCCCEEEGGGHHHHHHHHH
T ss_pred CCCHHHHHHHHhhcCCCEEEEECcchhcCCEEEEEEec-CceEEEeHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999 9999999999988876554
No 18
>2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A
Probab=99.35 E-value=1.7e-12 Score=86.90 Aligned_cols=59 Identities=8% Similarity=0.124 Sum_probs=55.1
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEccccc--ccCeEEEEEcCCCceeeecHHHHHHHHHHHhh
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSEL--ASNSVKLRNVLTREEETISRDKLLDTLQEKLK 64 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~--~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~~ 64 (65)
+.++++||++|++.|+||+|+||++|+ ++|+|+||++.+++|..+++++++..+...+.
T Consensus 597 ~~sigkk~k~Ad~~G~p~~IiIG~~El~~~~g~Vtvr~r~t~eq~~v~l~el~~~l~~~l~ 657 (693)
T 2zt5_A 597 SGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLAN 657 (693)
T ss_dssp CSCHHHHHHHHHHTTCCEEEEECHHHHTSSSCEEEEEETTTCCEEEEETTTHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHcCCCEEEEEcchhhhccCCEEEEEECCCCceEEEeHHHHHHHHHHHHh
Confidence 579999999999999999999999999 99999999999999999999999998876553
No 19
>4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens}
Probab=99.35 E-value=1.3e-12 Score=85.29 Aligned_cols=58 Identities=16% Similarity=0.053 Sum_probs=53.8
Q ss_pred CCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHhh
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKLK 64 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~~ 64 (65)
.+++++|++|+..|+||+|+||++|+++|+|+|+++.++++..+++++++..+...+.
T Consensus 356 ~s~G~K~~~ael~GiP~~ivIG~kele~g~V~vr~R~tgeq~~v~~~el~~~l~~ll~ 413 (519)
T 4hvc_A 356 YSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVRRDTGEKLTVAENEAETKLQAILE 413 (519)
T ss_dssp SCHHHHHHHHHHTTCSEEEEECHHHHHHTEEEEEETTTCCEEEEEGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCEEEEECchhhcCCeEEEEECCCCCccceeHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999888766543
No 20
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1
Probab=99.31 E-value=3e-12 Score=81.39 Aligned_cols=58 Identities=22% Similarity=0.441 Sum_probs=54.3
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHh
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKL 63 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~ 63 (65)
+++++++|++|++.|+||+|+||++|.++|+|+||++.++++..++++++++.+...+
T Consensus 368 ~~~~~~~~~~a~~~g~~~~iiiG~~e~~~g~v~vk~~~~~~~~~v~~~el~~~l~~~~ 425 (434)
T 1wu7_A 368 ERGLSAQLKYASAIGADFAVIFGERDLERGVVTIRNMYTGSQENVGLDSVVEHLISQA 425 (434)
T ss_dssp CCCHHHHHHHHHHTTCSEEEEEEHHHHHTTEEEEEETTTCCEEEEEGGGHHHHHHHCC
T ss_pred CCCHHHHHHHHHHCCCCEEEEECchhhhcCeEEEEECCCCCeEEEcHHHHHHHHHHHh
Confidence 5799999999999999999999999999999999999999999999999999886543
No 21
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=99.29 E-value=2.1e-12 Score=83.11 Aligned_cols=50 Identities=8% Similarity=0.183 Sum_probs=37.1
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHH
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKL 55 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~ 55 (65)
++++++|+++|++.|+||+||+|++|.++|+|+||||.+++|..+++++.
T Consensus 397 ~~slkkq~k~A~k~ga~~vviiGe~E~~~g~v~vK~l~tgeQ~~~~~~~~ 446 (456)
T 3lc0_A 397 KKKVVQAFNYADRVGAVRAVLVAPEEWERGEVQVKMLREGTGKEEGGAER 446 (456)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEECHHHHHTTEEEEEECC------------
T ss_pred CCCHHHHHHHHHHcCCCEEEEECCchhcCCeEEEEECCCCCeEEeccccc
Confidence 67899999999999999999999999999999999999999998887653
No 22
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP}
Probab=99.27 E-value=2.2e-12 Score=82.97 Aligned_cols=57 Identities=21% Similarity=0.460 Sum_probs=52.3
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccC-eEEEEEcCCCceeeecHHHHHHHHHHHh
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASN-SVKLRNVLTREEETISRDKLLDTLQEKL 63 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~-~v~vk~~~~~~~~~~~~~e~~~~i~~~~ 63 (65)
++++++||++|++.|+||+||||++ .++| +|+||++.+++|..+++++++..+...+
T Consensus 407 ~~sl~~q~k~A~~~g~p~~iiiG~~-~~~g~~V~vk~~~t~eq~~v~~~el~~~l~~~l 464 (465)
T 3net_A 407 KRQLGKQFQAADKQGIRFCVIIGAD-EAAAQKSSLKDLQSGEQVEVALADLAEEIKRRL 464 (465)
T ss_dssp CCCHHHHHHHHHHHTCCEEEECCHH-HHHTTCCEEEETTTTEEEECC-CCHHHHHHHTC
T ss_pred CCCHHHHHHHHHHcCCCEEEEECch-hhcCCEEEEEECCCCceEEeeHHHHHHHHHHhc
Confidence 6799999999999999999999999 9999 9999999999999999999999887643
No 23
>1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1
Probab=99.27 E-value=6.9e-12 Score=79.20 Aligned_cols=55 Identities=31% Similarity=0.500 Sum_probs=52.0
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHH
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQ 60 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~ 60 (65)
+.++++++++|++.|+||+|+||++|.++|+|+||++.++++..++++++++.+.
T Consensus 365 ~~~~~~~~~~a~~~g~p~~iiig~~e~~~~~v~vk~~~~~~~~~v~~~~l~~~l~ 419 (420)
T 1qe0_A 365 QRKIKGQMKQADRLGAKFTIVIGDQELENNKIDVKNMTTGESETIELDALVEYFK 419 (420)
T ss_dssp CCCHHHHHHHHHHTTCSEEEEECHHHHHHTCEEEEETTTCCEEEECTTHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCEEEEECcchhhcCeEEEEECCCCCeEEEcHHHHHHHHh
Confidence 5799999999999999999999999999999999999999999999999988764
No 24
>2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A*
Probab=99.24 E-value=2.2e-12 Score=82.80 Aligned_cols=54 Identities=19% Similarity=0.297 Sum_probs=49.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHH
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTL 59 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i 59 (65)
+.+++++|++|++.|+||+|+||++|.++|+|+||++.++++..++++++++.+
T Consensus 404 ~~~~g~k~~~ad~~g~p~~iivG~~e~~~g~v~vr~r~~~~~~~v~~~~l~~~l 457 (458)
T 2i4l_A 404 DQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELKRRSDGARENLALADVVARL 457 (458)
T ss_dssp SCCHHHHHHHHHHHTCSEEEEECHHHHTTTEEEEEETTTCCEEEEETTTTTCC-
T ss_pred CCCHHHHHHHHHhcCCCEEEEECCchhhCCEEEEEECCCCcEEEEeHHHHHHhh
Confidence 579999999999999999999999999999999999999999999999876543
No 25
>3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A
Probab=99.19 E-value=1.7e-11 Score=78.92 Aligned_cols=58 Identities=12% Similarity=0.161 Sum_probs=50.8
Q ss_pred CCCHHHHHHHhh-hcCCcEEEEEcccccccCeEEEEEcCCCc--eeeecHH-----HHHHHHHHHh
Q psy14271 6 NPKLLDQLQYCE-DNQIHWCIVIGQSELASNSVKLRNVLTRE--EETISRD-----KLLDTLQEKL 63 (65)
Q Consensus 6 ~~~l~kq~k~A~-~~~~~~~vivG~~E~~~~~v~vk~~~~~~--~~~~~~~-----e~~~~i~~~~ 63 (65)
+.+++++|++|+ +.|+||+|+||++|.++|+|+||++.+++ +..++++ ++++.+...+
T Consensus 381 ~~~~g~k~~~a~~~~gip~~iiiG~~e~~~~~V~vr~r~~~~q~~~~v~~~~~~~~~~~~~~~~~~ 446 (471)
T 3a32_A 381 KTGLSSDVRHIESTAKPAVNVFIGAKEVREKVLDVRVFDLESMKRRRLAIAYGDAADAVENLAAVA 446 (471)
T ss_dssp TTTHHHHHHHHHHTTCCSEEEEECHHHHHHTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhcCCCEEEEECchhhhCCEEEEEECCCCccceEEEeecccchhHHHHHHHHHH
Confidence 578999999999 99999999999999999999999999887 5778877 7776665544
No 26
>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803}
Probab=99.10 E-value=1e-10 Score=76.47 Aligned_cols=50 Identities=20% Similarity=0.239 Sum_probs=48.2
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCCc--eeeecHHHH
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTRE--EETISRDKL 55 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~~--~~~~~~~e~ 55 (65)
+.+++++|++|+..|+||.|+||++|+++|+|+++++++++ +..++++++
T Consensus 347 ~~s~G~K~~~ael~GvP~~i~vG~ke~e~g~V~vr~Rd~~~~~k~~v~~~el 398 (518)
T 3ial_A 347 SKSMGDKLYYYELKGVPLRIEVGQRDLANGQCIVVPRDVGKDQKRVIPITEV 398 (518)
T ss_dssp TSCHHHHHHHHHHTTCSEEEEEEHHHHHTTEEEEEETTTCGGGCEEEEHHHH
T ss_pred CCCHHHHHHHHHHcCCCEEEEECcchhhCCEEEEEECCCCccceeEeeHHHH
Confidence 47999999999999999999999999999999999999999 999999999
No 27
>4evu_A Putative periplasmic protein YDGH; structural genomics, PSI-biology, program for the characteri secreted effector proteins, pcsep; HET: MSE; 1.45A {Salmonella enterica subsp}
Probab=78.40 E-value=2.4 Score=20.89 Aligned_cols=27 Identities=7% Similarity=0.135 Sum_probs=18.3
Q ss_pred HHHhhhcCCcEEEEEcccccccCeEEE
Q psy14271 13 LQYCEDNQIHWCIVIGQSELASNSVKL 39 (65)
Q Consensus 13 ~k~A~~~~~~~~vivG~~E~~~~~v~v 39 (65)
-+.|+.+|+.+..|++..|...+.+.+
T Consensus 40 skkAdekGA~~y~Ii~~~~~~~gn~~a 66 (72)
T 4evu_A 40 AKRAAKKGAKYYHITRQWQERGNNITI 66 (72)
T ss_dssp HHHHHHTTCSEEEEEEEEEC---CEEE
T ss_pred HHHHHHcCCCEEEEEEeecCCCCCEEE
Confidence 356999999999999876555555443
No 28
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=70.28 E-value=7.6 Score=20.66 Aligned_cols=35 Identities=17% Similarity=0.245 Sum_probs=26.1
Q ss_pred CHHHHHHHhhhcCCcEEEEE--cccccccCeEEEEEc
Q psy14271 8 KLLDQLQYCEDNQIHWCIVI--GQSELASNSVKLRNV 42 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~viv--G~~E~~~~~v~vk~~ 42 (65)
.+..-...|...|+|+.+|. |..|...|+.|+--.
T Consensus 67 el~~l~~~a~~~gl~~~~i~DAG~Tei~~gt~Tvlai 103 (121)
T 1wn2_A 67 ELFKLKAEAEKLGLPNALIRDAGLTEIPPGTVTVLAV 103 (121)
T ss_dssp HHHHHHHHHHHTTCCEEEEECTTCTTSCTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEcCCccccCCCCEEEEEe
Confidence 35566677888899988884 568888888887543
No 29
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=69.68 E-value=9.4 Score=20.21 Aligned_cols=34 Identities=12% Similarity=0.382 Sum_probs=25.2
Q ss_pred CHHHHHHHhhhcCCcEEEE--EcccccccCeEEEEE
Q psy14271 8 KLLDQLQYCEDNQIHWCIV--IGQSELASNSVKLRN 41 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~vi--vG~~E~~~~~v~vk~ 41 (65)
.+..-...|...|+|+.+| -|..|...|+.++--
T Consensus 66 el~~l~~~a~~~gl~~~~i~DAG~Tei~~gs~Tvla 101 (120)
T 1xty_A 66 EIISRAKKAETMNLPFSIIEDAGKTQLEPGTITCLG 101 (120)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCSSSSSCTTCEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEcCCccccCCCCeEEEE
Confidence 3566667788889998887 466788888887754
No 30
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=64.27 E-value=15 Score=19.79 Aligned_cols=31 Identities=10% Similarity=0.066 Sum_probs=18.3
Q ss_pred cCeEEEEEcCCCceeeecHHHHHHHHHHHhh
Q psy14271 34 SNSVKLRNVLTREEETISRDKLLDTLQEKLK 64 (65)
Q Consensus 34 ~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~~ 64 (65)
+|.|..+..........+.++++..++.+.+
T Consensus 130 ~G~I~~~~~~~~~~~~~~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 130 DGTVAYKWVTDNPLNEPDYDEVVREANKIAG 160 (164)
T ss_dssp TSBEEEEEECSCTTCCCCHHHHHHHHHHHHH
T ss_pred CCEEEEEEEeCCCCCCCCHHHHHHHHHHHhc
Confidence 4666666554333334467888877766554
No 31
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=61.25 E-value=15 Score=19.35 Aligned_cols=34 Identities=15% Similarity=0.231 Sum_probs=23.6
Q ss_pred CHHHHHHHhhhcCCcEEEEE--cccccccCeEEEEE
Q psy14271 8 KLLDQLQYCEDNQIHWCIVI--GQSELASNSVKLRN 41 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~viv--G~~E~~~~~v~vk~ 41 (65)
.+..-...|...|+|+.+|. |.+|...|+.++--
T Consensus 63 ~l~~l~~~a~~~gl~~~~i~DAG~Tqi~~gt~Tvla 98 (117)
T 1q7s_A 63 TLIALLAHAKMLGLTVSLIQDAGRTQIAPGSQTVLG 98 (117)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECSSSSEEEEEEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCcccCCCCeEEEE
Confidence 45566677888889887775 45667777777743
No 32
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=59.79 E-value=11 Score=19.87 Aligned_cols=20 Identities=10% Similarity=0.223 Sum_probs=17.3
Q ss_pred CHHHHHHHhhhcCCcEEEEE
Q psy14271 8 KLLDQLQYCEDNQIHWCIVI 27 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~viv 27 (65)
+....+.+|++.|++|.|.-
T Consensus 68 skE~AiayAek~G~~y~V~e 87 (108)
T 2lju_A 68 TRELAIAYAVAHKIDYTVLQ 87 (108)
T ss_dssp SHHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHHHHHHcCCEEEEec
Confidence 56778999999999999874
No 33
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=59.17 E-value=15 Score=19.30 Aligned_cols=34 Identities=15% Similarity=0.330 Sum_probs=18.3
Q ss_pred CHHHHHHHhhhcCCcEEEE--EcccccccCeEEEEE
Q psy14271 8 KLLDQLQYCEDNQIHWCIV--IGQSELASNSVKLRN 41 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~vi--vG~~E~~~~~v~vk~ 41 (65)
.+..-...|...|+|+.+| -|..|...|+.++--
T Consensus 61 ~l~~l~~~a~~~gl~~~~i~DAG~Tei~~gt~Tvla 96 (115)
T 2zv3_A 61 ELIDIYNKARSEGLPCSIIRDAGHTQLEPGTLTAVA 96 (115)
T ss_dssp HHHHHHHHHHHHTCCEEEEEECC-------EEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEeCCceecCCCCEEEEE
Confidence 3555666777888888777 455677777777743
No 34
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=59.01 E-value=18 Score=19.01 Aligned_cols=35 Identities=11% Similarity=0.210 Sum_probs=25.5
Q ss_pred CHHHHHHHhhhcCCcEEEEE--cccccccCeEEEEEc
Q psy14271 8 KLLDQLQYCEDNQIHWCIVI--GQSELASNSVKLRNV 42 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~viv--G~~E~~~~~v~vk~~ 42 (65)
.+..-...|...|+|+.+|. |..|...|+.++--.
T Consensus 63 ~l~~l~~~a~~~gl~~~~v~DAG~Tei~~gt~Tvlai 99 (117)
T 1rlk_A 63 EIMEIKRMADSMGIVNEIVQDRGYTQVEPGTITCIGL 99 (117)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCCSSSSSCCCEEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEeCCccCcCCCCEEEEEe
Confidence 35566667788899988884 558888888887543
No 35
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=58.27 E-value=13 Score=19.91 Aligned_cols=35 Identities=17% Similarity=0.203 Sum_probs=26.4
Q ss_pred CHHHHHHHhhhcCCcEEEE--EcccccccCeEEEEEc
Q psy14271 8 KLLDQLQYCEDNQIHWCIV--IGQSELASNSVKLRNV 42 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~vi--vG~~E~~~~~v~vk~~ 42 (65)
.+..-...|...|+|+.+| -|-+|...|+.|+--.
T Consensus 60 el~~L~~~a~~~gl~~~~I~DAG~Tei~pgt~Tvlai 96 (123)
T 1rzw_A 60 ELLGIKHKAESLGLVTGLVQDAGLTEVPPGTITAVVI 96 (123)
T ss_dssp HHHHHHHHHHHTTCCEEEECCTTCCSCSTTSCEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCcccCCCCEEEEEe
Confidence 3566677788889999888 4667888888877543
No 36
>3k8u_A Putative ABC transporter, ATP-binding protein COMA; cysteine protease, quorum-sensing, hydrolase; 1.90A {Streptococcus mutans}
Probab=56.38 E-value=21 Score=19.02 Aligned_cols=26 Identities=8% Similarity=0.195 Sum_probs=19.5
Q ss_pred ccCeEEEEEcCCC-ceeeecHHHHHHH
Q psy14271 33 ASNSVKLRNVLTR-EEETISRDKLLDT 58 (65)
Q Consensus 33 ~~~~v~vk~~~~~-~~~~~~~~e~~~~ 58 (65)
.++.+.|-+-..+ ....++.+++.+.
T Consensus 104 ~~~~v~I~DP~~g~~~~~ls~~ef~~~ 130 (156)
T 3k8u_A 104 QNNQLIIGDPDPSVKVTRMSKERFQSE 130 (156)
T ss_dssp ETTEEEEEECSTTTEEEEEEHHHHHHH
T ss_pred cCCEEEEEcCCCCcceEEEcHHHHHhh
Confidence 3567888887666 4788999998754
No 37
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=53.02 E-value=13 Score=19.58 Aligned_cols=20 Identities=10% Similarity=0.305 Sum_probs=17.1
Q ss_pred CHHHHHHHhhhcCCcEEEEE
Q psy14271 8 KLLDQLQYCEDNQIHWCIVI 27 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~viv 27 (65)
+....+.+|++.|++|.|.-
T Consensus 60 skE~AiayAek~G~~y~V~e 79 (106)
T 2jya_A 60 TQEQAEAYAQRKGIEYRVIL 79 (106)
T ss_dssp SHHHHHHHHHHHTCEEEECC
T ss_pred CHHHHHHHHHHcCCEEEEeC
Confidence 56778999999999998863
No 38
>1hi9_A Dciaa, dipeptide transport protein DPPA; hydrolase (protease), protease, D-aminopeptidase, decamer, SELF-compartmentalizing; 2.4A {Bacillus subtilis} SCOP: c.99.1.1
Probab=50.42 E-value=21 Score=21.75 Aligned_cols=47 Identities=15% Similarity=0.127 Sum_probs=33.3
Q ss_pred HhhhcCCcEEEEEccccccc---------CeEEEEEc-CCCceeeecHHHHHHHHHH
Q psy14271 15 YCEDNQIHWCIVIGQSELAS---------NSVKLRNV-LTREEETISRDKLLDTLQE 61 (65)
Q Consensus 15 ~A~~~~~~~~vivG~~E~~~---------~~v~vk~~-~~~~~~~~~~~e~~~~i~~ 61 (65)
.|-..|+|.+++-|++-... -++.+|.- .......++.+.....|+.
T Consensus 140 ~Ag~~gVPV~lvsGDd~~~~e~~~~~P~~~tv~vK~~~gr~aa~~~~p~~a~~~I~~ 196 (274)
T 1hi9_A 140 VAGYYDVPVLMVAGDDRAAKEAEELIPNVTTAAVKQTISRSAVKCLSPAKRGRLLTE 196 (274)
T ss_dssp HHHHTTCCEEEEEEEHHHHHHHHTTSTTCEEEEEEEEEETTEEEECCHHHHHHHHHH
T ss_pred HHhhcCCCEEEEecCHHHHHHHHHhCCCCeEEEEeecccccccccCCHHHHHHHHHH
Confidence 47788999999999965522 26777763 3345577788887777654
No 39
>1yo3_A Dynein light chain 1; structural genomics consortium, microtub malaria, SGC, transport protein; 1.65A {Plasmodium falciparum} PDB: 1f3c_A 1f95_A 1f96_A 1rhw_A 2p1k_A 2p2t_A 3bri_A 3e2b_A 3fm7_E 3glw_A 3dvt_A 2pg1_A 3p8m_A 1pwj_A 2xqq_A 3brl_A 1re6_A 1cmi_A 3dvh_A 3dvp_A ...
Probab=46.49 E-value=23 Score=18.22 Aligned_cols=20 Identities=15% Similarity=0.474 Sum_probs=14.7
Q ss_pred HHHHHHHhhhcCCcEEEEEccc
Q psy14271 9 LLDQLQYCEDNQIHWCIVIGQS 30 (65)
Q Consensus 9 l~kq~k~A~~~~~~~~vivG~~ 30 (65)
+++.|+. +.|..|-+|||..
T Consensus 55 IK~~fDk--kyG~~WHcIVG~~ 74 (102)
T 1yo3_A 55 IKKEFDR--KYDPTWHCVVGRN 74 (102)
T ss_dssp HHHHHHH--HHCSCEEEEESSS
T ss_pred HHHHHhh--hcCCCCEEEEccC
Confidence 4555554 6699999999954
No 40
>3rjs_A Dynein light chain motor protein; parasite, LC8, DLC8, TGDLC8, LIG PIN, DLC1, dynll1, transport protein; 1.50A {Toxoplasma gondii} PDB: 1pwj_A 2xqq_A 1re6_A 3p8m_A 3dvt_A 2pg1_A 1rhw_A 2p1k_A 2p2t_A 3bri_A 3e2b_A 3fm7_E 3glw_A 3brl_A 3dvh_A 3dvp_A 1pwk_A 1f3c_A 1f95_A 1f96_A ...
Probab=42.86 E-value=22 Score=17.72 Aligned_cols=20 Identities=15% Similarity=0.514 Sum_probs=15.1
Q ss_pred HHHHHHHhhhcCCcEEEEEccc
Q psy14271 9 LLDQLQYCEDNQIHWCIVIGQS 30 (65)
Q Consensus 9 l~kq~k~A~~~~~~~~vivG~~ 30 (65)
+++.|+. +.|..|-+|||..
T Consensus 42 IK~~fD~--kyg~~WhciVG~~ 61 (89)
T 3rjs_A 42 IKKEFDR--KHNPTWHCVVGRN 61 (89)
T ss_dssp HHHHHHH--HHCSCCEEEEESS
T ss_pred HHHHHhc--ccCCCCEEEEecC
Confidence 4455554 6699999999986
No 41
>3zua_A CLD, alpha-hemolysin translocation ATP-binding protein; C39 peptidase-like domain, ABC transporter, haemolysin, HYDR heteronuclear; NMR {Escherichia coli}
Probab=42.70 E-value=36 Score=17.74 Aligned_cols=24 Identities=8% Similarity=0.148 Sum_probs=18.8
Q ss_pred CeEEEEEcCCCceeeecHHHHHHH
Q psy14271 35 NSVKLRNVLTREEETISRDKLLDT 58 (65)
Q Consensus 35 ~~v~vk~~~~~~~~~~~~~e~~~~ 58 (65)
+.+.|-+-..+....++.++|.+.
T Consensus 99 ~~~~I~dP~~g~~~~~s~~ef~~~ 122 (142)
T 3zua_A 99 NRYLIFDLEQRNPRVLEQSEFEAL 122 (142)
T ss_dssp TEEEEEETTTTEEEEEEHHHHHHH
T ss_pred CEEEEEcCCCCCcEEecHHHHHhh
Confidence 678888876666788999998764
No 42
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=39.79 E-value=18 Score=21.73 Aligned_cols=27 Identities=11% Similarity=0.158 Sum_probs=23.2
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEccccc
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
+.-+.++++.|.+.|..-++.||+...
T Consensus 108 d~~v~~Kv~~Al~~GL~pIlCvGEtle 134 (255)
T 3qst_A 108 DEFLAAKAKFALENGMKIIYCCGEHLS 134 (255)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCCHH
T ss_pred HHHHHHHHHHHHHCCCeEEEEcCCcHH
Confidence 346789999999999999999999743
No 43
>4ds1_A Dynein light chain 1, cytoplasmic; dynein light chain fold, peptide binding, nucle structural protein-transport protein complex; 1.85A {Saccharomyces cerevisiae}
Probab=38.69 E-value=28 Score=17.71 Aligned_cols=20 Identities=20% Similarity=0.549 Sum_probs=14.9
Q ss_pred HHHHHHHhhhcCCcEEEEEccc
Q psy14271 9 LLDQLQYCEDNQIHWCIVIGQS 30 (65)
Q Consensus 9 l~kq~k~A~~~~~~~~vivG~~ 30 (65)
+++.|+. +.|..|-+|||..
T Consensus 50 IK~~fDk--kyG~~WhcIVG~~ 69 (97)
T 4ds1_A 50 VKKQLDV--KYGNTWHVIVGKN 69 (97)
T ss_dssp HHHHHHH--HHCSCEEEEEEEE
T ss_pred HHHHHhC--ccCCCCEEEEccC
Confidence 4555554 6699999999884
No 44
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=38.66 E-value=30 Score=20.65 Aligned_cols=26 Identities=8% Similarity=0.199 Sum_probs=22.9
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
.-+.++++.|...|..-++.||+...
T Consensus 101 ~~v~~Kv~~Al~~GL~pI~CvGEtle 126 (244)
T 2v5b_A 101 EIVAEKVAQACAAGFHVIVCVGETNE 126 (244)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCHH
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCcHH
Confidence 45789999999999999999999743
No 45
>2jna_A Putative secreted protein; GFT-homodimer, PSI-2, alpha+beta, putative secreted Pro structural genomics, protein structure initiative; NMR {Salmonella typhimurium} SCOP: d.230.6.1
Probab=38.63 E-value=37 Score=17.64 Aligned_cols=27 Identities=7% Similarity=0.096 Sum_probs=18.7
Q ss_pred HHHHhhhcCCcEEEEEcccccccCeEEE
Q psy14271 12 QLQYCEDNQIHWCIVIGQSELASNSVKL 39 (65)
Q Consensus 12 q~k~A~~~~~~~~vivG~~E~~~~~v~v 39 (65)
--+.|+..|++|-.|++..+- .|.+..
T Consensus 60 La~kAd~~GA~yY~Iis~~~~-~~~~~~ 86 (104)
T 2jna_A 60 LSELADAKGGKYYHIIAAREH-GPNFEA 86 (104)
T ss_dssp HHHHHHHHTCSEEEEEEEEEE-TTEEEE
T ss_pred HHHHHHHcCCCEEEEEEEEcC-CCeEEE
Confidence 345699999998888876652 354443
No 46
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=37.38 E-value=25 Score=21.04 Aligned_cols=26 Identities=8% Similarity=0.133 Sum_probs=22.7
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccc
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSE 31 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E 31 (65)
+.-+.++++.|.+.|..-++.||+..
T Consensus 106 d~~v~~Kv~~Al~~GL~pI~CvGEtl 131 (249)
T 3th6_A 106 DVLIGEKIKHALESGLNVIACIGELL 131 (249)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCCH
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCcH
Confidence 34578999999999999999999973
No 47
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=37.36 E-value=32 Score=20.70 Aligned_cols=27 Identities=11% Similarity=0.279 Sum_probs=23.2
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEccccc
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
+.-+.++++.|...|..-++.||+...
T Consensus 106 d~~v~~Kv~~Al~~GL~pI~CvGEtle 132 (255)
T 1tre_A 106 DELIAKKFAVLKEQGLTPVLCIGETEA 132 (255)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCCHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 345789999999999999999999753
No 48
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=37.22 E-value=32 Score=20.86 Aligned_cols=26 Identities=8% Similarity=0.001 Sum_probs=22.9
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
.-+.++++.|.+.|..-++.||+...
T Consensus 112 e~V~~Kv~~Al~~GL~pIlCvGEtle 137 (267)
T 3ta6_A 112 ALVAAKAATALKHGLTPIVCIGEHLD 137 (267)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCHH
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCHH
Confidence 45789999999999999999999753
No 49
>3mu7_A XAIP-II, xylanase and alpha-amylase inhibitor protein; TIM barell, amylase/xylanase inhibitory protein, hydrolase I; 1.29A {Scadoxus multiflorus} SCOP: c.1.8.0 PDB: 3o9n_A 3oih_A* 3hu7_A 3m7s_A* 3d5h_A*
Probab=36.99 E-value=34 Score=20.74 Aligned_cols=24 Identities=21% Similarity=0.421 Sum_probs=22.0
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQS 30 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~ 30 (65)
..+...++.++.+|+++++-+|..
T Consensus 54 ~~l~~dI~~cQ~~G~kVlLSiGG~ 77 (273)
T 3mu7_A 54 KGLEPQIKHCQSKNVKVLLSIGGP 77 (273)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEEES
T ss_pred HHHHHHHHHHHHCCCEEEEEeccC
Confidence 578999999999999999999885
No 50
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=36.91 E-value=33 Score=20.32 Aligned_cols=25 Identities=12% Similarity=0.300 Sum_probs=22.2
Q ss_pred CCHHHHHHHhhhcCCcEEEEEcccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSE 31 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E 31 (65)
.-+.++++.|.+.|..-++.+|+..
T Consensus 101 ~~v~~Kv~~Al~~GL~pI~CvGEtl 125 (233)
T 2jgq_A 101 SFLKEKFDFFKSKNFKIVYCIGEEL 125 (233)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCcH
Confidence 4578899999999999999999973
No 51
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=36.74 E-value=39 Score=20.54 Aligned_cols=26 Identities=8% Similarity=0.123 Sum_probs=22.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccc
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSE 31 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E 31 (65)
+.-+.++++.|...|..-++.||+..
T Consensus 131 de~V~~K~~~Al~~GL~pIlCVGEtl 156 (272)
T 4g1k_A 131 NETVAAKARRALAAGLTPIVCVGETL 156 (272)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCCH
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCCH
Confidence 34578999999999999999999974
No 52
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=36.63 E-value=33 Score=20.50 Aligned_cols=26 Identities=8% Similarity=-0.020 Sum_probs=22.5
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
.-+.++++.|.+.|..-++.||+...
T Consensus 107 ~~v~~Kv~~Al~~GL~pI~CvGEtle 132 (248)
T 1r2r_A 107 ELIGQKVAHALSEGLGVIACIGEKLD 132 (248)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 45788999999999999999999643
No 53
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=36.44 E-value=22 Score=21.45 Aligned_cols=26 Identities=8% Similarity=0.102 Sum_probs=23.1
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
.-+.++++.|.+.|..-++.||+...
T Consensus 106 ~~v~~Kv~~Al~~GL~pIvCvGEtle 131 (259)
T 2i9e_A 106 ELIAEKVCHALESGLKVIACIGETLE 131 (259)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCHH
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCcHH
Confidence 45899999999999999999999753
No 54
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=36.33 E-value=22 Score=21.38 Aligned_cols=26 Identities=4% Similarity=0.056 Sum_probs=22.9
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
.-+.++++.|.+.|..-++.||+...
T Consensus 108 ~~v~~Kv~~Al~~GL~pI~CvGEtle 133 (255)
T 1b9b_A 108 EFINRKVKAVLEKGMTPILCVGETLE 133 (255)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 45789999999999999999999754
No 55
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=36.24 E-value=40 Score=20.53 Aligned_cols=26 Identities=12% Similarity=0.104 Sum_probs=22.7
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccc
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSE 31 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E 31 (65)
+.-+.++++.|...|..-++.||+..
T Consensus 131 de~V~~Kv~~Al~~GL~pIlCVGEtl 156 (275)
T 3kxq_A 131 DAIVRAKVQAAWRAGLVALICVGETL 156 (275)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCCH
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence 34578999999999999999999973
No 56
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=36.22 E-value=34 Score=20.46 Aligned_cols=26 Identities=19% Similarity=0.250 Sum_probs=22.7
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
.-+.++++.|.+.|..-++.||+...
T Consensus 107 ~~v~~Kv~~Al~~GL~pI~CvGEtle 132 (248)
T 1o5x_A 107 EDVREKLQASLKNNLKAVVCFGESLE 132 (248)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 45788999999999999999999753
No 57
>2ohw_A YUEI protein; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 1.40A {Bacillus subtilis} SCOP: d.79.8.1
Probab=36.06 E-value=27 Score=18.92 Aligned_cols=21 Identities=14% Similarity=0.139 Sum_probs=16.8
Q ss_pred CHHHHHHHhhhcCCcEEEEEc
Q psy14271 8 KLLDQLQYCEDNQIHWCIVIG 28 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~vivG 28 (65)
.+..=++.|.+.|+||.++=.
T Consensus 77 ~~~~YiklA~~~~i~fTiV~~ 97 (133)
T 2ohw_A 77 SYSSYIQMASRYGVPFKIVSD 97 (133)
T ss_dssp HHHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHHHHHcCCCeEEecC
Confidence 355667889999999999753
No 58
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=35.85 E-value=35 Score=20.46 Aligned_cols=26 Identities=8% Similarity=0.028 Sum_probs=22.6
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
.-+.++++.|.+.|..-++.||+...
T Consensus 108 ~~v~~Kv~~Al~~GL~pI~CvGEtle 133 (251)
T 2vxn_A 108 EIVAQKVSEACKQGFMVIACIGETLQ 133 (251)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 45788999999999999999999743
No 59
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=35.69 E-value=51 Score=17.38 Aligned_cols=38 Identities=13% Similarity=0.232 Sum_probs=19.2
Q ss_pred CcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHH
Q psy14271 21 IHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEK 62 (65)
Q Consensus 21 ~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~ 62 (65)
.|..++|.+ +|.|..+....+.....+.+++.+.|+..
T Consensus 133 ~p~~~liD~----~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 133 ARAVFIIDK----EGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp CCEEEEECT----TSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred eeEEEEEcC----CCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 355555533 25555555432222334567777766553
No 60
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=35.56 E-value=35 Score=20.39 Aligned_cols=26 Identities=12% Similarity=0.203 Sum_probs=22.6
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
.-+.++++.|.+.|..-++.||+...
T Consensus 106 ~~v~~Kv~~Al~~GL~pI~CvGEtle 131 (247)
T 1ney_A 106 KFIADKTKFALGQGVGVILCIGETLE 131 (247)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 45788999999999999999999743
No 61
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=35.29 E-value=49 Score=20.57 Aligned_cols=27 Identities=11% Similarity=0.133 Sum_probs=23.2
Q ss_pred CCHHHHHHHhhhcCCcEEEEEcccccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSELA 33 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E~~ 33 (65)
.-+.++++.|.+.|..-++.||+...+
T Consensus 160 e~V~~Kv~aAl~~GL~pIvCVGEtlee 186 (310)
T 3s6d_A 160 QQVARKAAAAADQGLIPLVCIGEVSTL 186 (310)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCSCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCcHHH
Confidence 456899999999999999999997543
No 62
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=34.43 E-value=33 Score=20.59 Aligned_cols=26 Identities=15% Similarity=0.350 Sum_probs=22.8
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
.-+.++++.|.+.|..-++.||+...
T Consensus 109 ~~v~~Kv~~Al~~GL~pI~CvGEtle 134 (256)
T 1aw2_A 109 EFVAKKFAFLKENGLTPVLCIGESDA 134 (256)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECCCHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 45789999999999999999999753
No 63
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=34.33 E-value=45 Score=20.25 Aligned_cols=27 Identities=15% Similarity=0.228 Sum_probs=23.3
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEccccc
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
+.-+.++++.|.+.|..-++.||+...
T Consensus 129 de~v~~Kv~~Al~~GL~pIlCVGEtle 155 (271)
T 3krs_A 129 DQIVNNKVKKGLENGLKIVLCIGESLS 155 (271)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCCHH
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCcHH
Confidence 345789999999999999999999753
No 64
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=34.23 E-value=38 Score=20.65 Aligned_cols=25 Identities=12% Similarity=0.145 Sum_probs=22.2
Q ss_pred CCHHHHHHHhhhcCCcEEEEEcccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSE 31 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E 31 (65)
.-+.++++.|.+.|..-++.||+..
T Consensus 126 e~V~~Kv~~Al~~GL~pI~CvGEtl 150 (275)
T 1mo0_A 126 ALIAEKTVHALEAGIKVVFCIGEKL 150 (275)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCcH
Confidence 4578899999999999999999974
No 65
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=33.92 E-value=74 Score=18.76 Aligned_cols=25 Identities=24% Similarity=0.419 Sum_probs=17.6
Q ss_pred CeEEEEEcCCCc-eeeecHHHHHHHH
Q psy14271 35 NSVKLRNVLTRE-EETISRDKLLDTL 59 (65)
Q Consensus 35 ~~v~vk~~~~~~-~~~~~~~e~~~~i 59 (65)
+.+.+-|-..+. ...++.+++....
T Consensus 188 ~~vyi~DP~~g~~~~~vs~~eFe~~w 213 (236)
T 3erv_A 188 ESVYIRDPLKDSLDVKVPREKFEQAW 213 (236)
T ss_dssp SEEEEECTTSCCSCCEEEHHHHHHHH
T ss_pred CEEEEECCCCCCccEEEcHHHHHHHH
Confidence 567777766664 4788998887654
No 66
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=33.88 E-value=26 Score=21.12 Aligned_cols=26 Identities=4% Similarity=0.054 Sum_probs=22.8
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
.-+.++++.|.+.|..-++.||+...
T Consensus 108 ~~v~~Kv~~Al~~GL~pI~CvGEtle 133 (257)
T 2yc6_A 108 EQSAKKAKRALEKGMTVIFCVGETLD 133 (257)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 45788999999999999999999753
No 67
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=33.74 E-value=47 Score=19.92 Aligned_cols=25 Identities=8% Similarity=0.158 Sum_probs=22.4
Q ss_pred CCHHHHHHHhhhcCCcEEEEEcccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSE 31 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E 31 (65)
.-+.++++.|...|..-++.||+..
T Consensus 110 ~~V~~Kv~~Al~~GL~pIlCvGEtl 134 (254)
T 3m9y_A 110 EEINKKAHAIFKHGMTPIICVGETD 134 (254)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCcH
Confidence 4578999999999999999999983
No 68
>1ta3_A XIP-1, xylanase inhibitor protein I; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Triticum aestivum} SCOP: c.1.8.5 PDB: 1om0_A* 1te1_A*
Probab=33.66 E-value=41 Score=20.20 Aligned_cols=23 Identities=13% Similarity=0.330 Sum_probs=21.2
Q ss_pred CHHHHHHHhhhcCCcEEEEEccc
Q psy14271 8 KLLDQLQYCEDNQIHWCIVIGQS 30 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~vivG~~ 30 (65)
.+..+++.++.+|.+.++-||.-
T Consensus 58 ~~~~~I~~cq~~g~kVlLSiGG~ 80 (274)
T 1ta3_A 58 SVGADIKHCQSKGVPVSLSIGGY 80 (274)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEES
T ss_pred HHHHHHHHHHhCCCEEEEecCCC
Confidence 58899999999999999999985
No 69
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=33.57 E-value=35 Score=20.41 Aligned_cols=26 Identities=12% Similarity=0.084 Sum_probs=22.5
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
.-+.++++.|.+.|..-++.||+...
T Consensus 107 ~~v~~Kv~~Al~~GL~pI~CvGEtle 132 (250)
T 2j27_A 107 EIVADKVAAAVASGFMVIACIGETLQ 132 (250)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECCCHH
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 45788999999999999999999743
No 70
>2cxh_A Probable BRIX-domain ribosomal biogenesis protein; 18S rRNA, IMP4, U3 snoRNP, ribosomal biogenesis binding, structural genomics, NPPSFA; 1.80A {Aeropyrum pernix} SCOP: c.51.1.2
Probab=32.88 E-value=75 Score=18.53 Aligned_cols=40 Identities=8% Similarity=0.033 Sum_probs=29.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEEcCCC
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRNVLTR 45 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~~~~~ 45 (65)
..+++.-...|...++..+++|++.--..+.+.+-++-.|
T Consensus 69 k~sLkeL~e~a~~~~~tdlivV~e~rg~p~~L~~~hlP~G 108 (217)
T 2cxh_A 69 HYSMEELAREAIIRGADRIVVVGERRGNPGIIRVYAVEGP 108 (217)
T ss_dssp TCCHHHHHHHHHHTTEEEEEEEEEETTEEEEEEEEECCSS
T ss_pred CcCHHHHHHHHHhCCCCEEEEEEecCCCCcEEEEEECCCC
Confidence 4578888999999999999999876644455666665444
No 71
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=32.68 E-value=45 Score=20.01 Aligned_cols=26 Identities=12% Similarity=-0.041 Sum_probs=22.8
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
.-+.++++.|.+.|..-++.||+...
T Consensus 106 ~~v~~Kv~~Al~~GL~pI~CvGEtle 131 (252)
T 2btm_A 106 ETVNKKVLAAFTRGLIPIICCGESLE 131 (252)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECCCHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 45789999999999999999999743
No 72
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=32.61 E-value=50 Score=19.73 Aligned_cols=26 Identities=8% Similarity=0.084 Sum_probs=22.7
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
.-+.++++.|.+.|..-++.||+...
T Consensus 106 ~~v~~Kv~~Al~~GL~pI~CvGE~le 131 (250)
T 1yya_A 106 ALVAEKAKRLLEEGITPILCVGEPLE 131 (250)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 45788999999999999999999743
No 73
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=32.51 E-value=37 Score=20.42 Aligned_cols=25 Identities=16% Similarity=0.341 Sum_probs=22.1
Q ss_pred CCHHHHHHHhhhcCCcEEEEEcccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSE 31 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E 31 (65)
.-+.++++.|.+.|..-++.||+..
T Consensus 114 ~~v~~Kv~~Al~~GL~pI~CvGEtl 138 (261)
T 1m6j_A 114 EQVAEKVKVAIDAGLKVIACIGETE 138 (261)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECCCH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCcH
Confidence 4578899999999999999999964
No 74
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=32.07 E-value=49 Score=18.83 Aligned_cols=22 Identities=27% Similarity=0.298 Sum_probs=19.4
Q ss_pred CCHHHHHHHhhhcCCcEEEEEc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIG 28 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG 28 (65)
..+.+.++.|...|++++++..
T Consensus 84 ~~~~~~i~~A~~lGa~~v~~~~ 105 (264)
T 1yx1_A 84 PELEPTLRRAEACGAGWLKVSL 105 (264)
T ss_dssp TTHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEec
Confidence 5789999999999999998753
No 75
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=30.61 E-value=62 Score=16.83 Aligned_cols=38 Identities=8% Similarity=0.169 Sum_probs=23.3
Q ss_pred cEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHh
Q psy14271 22 HWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKL 63 (65)
Q Consensus 22 ~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~ 63 (65)
|..++|+.+ |.|.-+.........-+.+++.+.|+..+
T Consensus 129 p~~~lid~~----G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 129 RSVFVLDEN----GKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp CEEEEECTT----SCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred eEEEEEcCC----CcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 778888543 77777765433233345677777776554
No 76
>2noc_A Putative periplasmic protein; GFT STR106, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella choleraesuis} SCOP: d.230.6.1
Probab=30.43 E-value=26 Score=18.04 Aligned_cols=20 Identities=0% Similarity=0.121 Sum_probs=15.9
Q ss_pred HHHHhhhcCCcEEEEEcccc
Q psy14271 12 QLQYCEDNQIHWCIVIGQSE 31 (65)
Q Consensus 12 q~k~A~~~~~~~~vivG~~E 31 (65)
--+.|+..|++|-.|++..+
T Consensus 58 La~kAd~~GA~~Y~Iis~~~ 77 (99)
T 2noc_A 58 LIKKADEKGADVVVLTSGQT 77 (99)
T ss_dssp HHHHHHHTCCSEEECCSCCS
T ss_pred HHHHHHHcCCCEEEEEEEcC
Confidence 34579999999999987665
No 77
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens}
Probab=27.92 E-value=54 Score=19.76 Aligned_cols=24 Identities=13% Similarity=0.113 Sum_probs=21.0
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQS 30 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~ 30 (65)
..+..+++.++..|.+.+|-||.-
T Consensus 83 ~~~~~~i~~~~~~g~kvllSiGG~ 106 (328)
T 4axn_A 83 TEFRRQVGVLNSQGRAVLISLGGA 106 (328)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEET
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 357889999999999999999985
No 78
>1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5
Probab=27.15 E-value=60 Score=19.71 Aligned_cols=25 Identities=16% Similarity=0.348 Sum_probs=22.2
Q ss_pred CCHHHHHHHhhhcCCcEEEEEcccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSE 31 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E 31 (65)
..+..+++.++..|.+.++-||.-.
T Consensus 63 ~~~~~~Ik~~q~~g~KVllSiGG~~ 87 (299)
T 1cnv_A 63 SFLESQIKECQRMGVKVFLALGGPK 87 (299)
T ss_dssp GGGHHHHHHHHHTTCEEEEEEECSS
T ss_pred HhHHHHHHHHHhCCCEEEEEecCCc
Confidence 4689999999999999999999864
No 79
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=27.08 E-value=66 Score=18.13 Aligned_cols=21 Identities=5% Similarity=0.382 Sum_probs=18.1
Q ss_pred CHHHHHHHhhhcCCcEEEEEc
Q psy14271 8 KLLDQLQYCEDNQIHWCIVIG 28 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~vivG 28 (65)
.+.+.++.|...|++++++.+
T Consensus 85 ~~~~~i~~a~~lG~~~v~~~~ 105 (278)
T 1i60_A 85 EFKGMMETCKTLGVKYVVAVP 105 (278)
T ss_dssp HHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEec
Confidence 467889999999999999864
No 80
>1wcu_A CBM29_1, non-catalytic protein 1; carbohydrate binding, carbohydrate binding module; 1.5A {Piromyces equi}
Probab=26.79 E-value=83 Score=17.09 Aligned_cols=21 Identities=14% Similarity=0.281 Sum_probs=16.5
Q ss_pred EEEcccccccCeEEEEEcCCC
Q psy14271 25 IVIGQSELASNSVKLRNVLTR 45 (65)
Q Consensus 25 vivG~~E~~~~~v~vk~~~~~ 45 (65)
+|+.+++-+-|-|++|++.++
T Consensus 36 ~vi~~~~~~YGAiSLK~~nS~ 56 (153)
T 1wcu_A 36 LVLTADPDEYGAISLKNLNSN 56 (153)
T ss_dssp EEEEECTTCCCEEEEEESSSS
T ss_pred EEEcCCCCccceEEEeeccCC
Confidence 566678888899999998554
No 81
>2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation, glycopr chitin-binding, chitin degradation, CAZY, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A* 2uy4_A* 2uy5_A*
Probab=26.56 E-value=67 Score=19.38 Aligned_cols=24 Identities=8% Similarity=0.347 Sum_probs=21.2
Q ss_pred CHHHHHHHhhhcCCcEEEEEcccc
Q psy14271 8 KLLDQLQYCEDNQIHWCIVIGQSE 31 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~vivG~~E 31 (65)
.+..+++.+...|.+.++-||.-.
T Consensus 67 ~~~~~i~~~q~~g~KVllSiGG~~ 90 (294)
T 2uy2_A 67 QIAEDIETCQSLGKKVLLSLGGAS 90 (294)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECSC
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCC
Confidence 467899999999999999999864
No 82
>4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina}
Probab=26.25 E-value=68 Score=19.15 Aligned_cols=23 Identities=9% Similarity=0.135 Sum_probs=19.9
Q ss_pred CHHHHHHHhhhcCCcEEEEEccc
Q psy14271 8 KLLDQLQYCEDNQIHWCIVIGQS 30 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~vivG~~ 30 (65)
.+-.+++.+...|++.++-||.-
T Consensus 63 ~l~~~i~~~q~~g~KvllsiGG~ 85 (283)
T 4ac1_X 63 TLWNETITMKQAGVKVMGMVGGA 85 (283)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETT
T ss_pred HHHHHHHHHHcCCCEEEEEEcCC
Confidence 35678899999999999999984
No 83
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=25.91 E-value=69 Score=15.89 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=20.2
Q ss_pred hcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHhh
Q psy14271 18 DNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKLK 64 (65)
Q Consensus 18 ~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~~ 64 (65)
-.++|.+++++.+ |.+.-+.. +.+++...|...++
T Consensus 112 v~~~P~~~lid~~----G~i~~~~~--------~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 112 ILTLPTNILLSPT----GKILARDI--------QGEALTGKLKELLK 146 (148)
T ss_dssp CCSSSEEEEECTT----SBEEEESC--------CHHHHHHHHHHHC-
T ss_pred CCCcCEEEEECCC----CeEEEecC--------CHHHHHHHHHHHHc
Confidence 3467777777443 44444332 66677777766554
No 84
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=25.74 E-value=80 Score=16.52 Aligned_cols=28 Identities=11% Similarity=0.160 Sum_probs=14.4
Q ss_pred cCeEEEEEcCCCceeeecHHHHHHHHHH
Q psy14271 34 SNSVKLRNVLTREEETISRDKLLDTLQE 61 (65)
Q Consensus 34 ~~~v~vk~~~~~~~~~~~~~e~~~~i~~ 61 (65)
+|.|..+..........+.+++.+.|+.
T Consensus 128 ~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 128 EGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp TSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 3555555443222233456777776643
No 85
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=25.62 E-value=74 Score=16.15 Aligned_cols=38 Identities=13% Similarity=-0.002 Sum_probs=21.1
Q ss_pred cCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHhhC
Q psy14271 19 NQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKLKE 65 (65)
Q Consensus 19 ~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~~~ 65 (65)
.++|..++++.+ |.+..+..+ ..+.+++.+.|...+++
T Consensus 119 ~~~P~~~lid~~----G~i~~~~~g-----~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 119 EGTPSIILADRK----GRIRQVQFG-----QVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp CSSSEEEEECTT----SBEEEEEES-----CCCHHHHHHHHHHHHTC
T ss_pred CccceEEEECCC----CcEEEEecC-----cCCHHHHHHHHHHHHhc
Confidence 456666666433 455444322 23566777777766653
No 86
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=25.29 E-value=75 Score=16.09 Aligned_cols=34 Identities=12% Similarity=0.270 Sum_probs=19.0
Q ss_pred cCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHhh
Q psy14271 19 NQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKLK 64 (65)
Q Consensus 19 ~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~~ 64 (65)
.++|.+++++.+ |.+.-+.. +.+++...|...+.
T Consensus 115 ~~~P~~~lid~~----G~i~~~~~--------~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 115 YKIPANILLSSD----GKILAKNL--------RGEELKKKIENIVE 148 (150)
T ss_dssp CSSSEEEEECTT----SBEEEESC--------CHHHHHHHHHHHHH
T ss_pred CccCeEEEECCC----CEEEEccC--------CHHHHHHHHHHHHh
Confidence 356666666433 45544432 56666666665553
No 87
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=25.28 E-value=76 Score=16.12 Aligned_cols=38 Identities=11% Similarity=0.045 Sum_probs=21.3
Q ss_pred hcCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHhh
Q psy14271 18 DNQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKLK 64 (65)
Q Consensus 18 ~~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~~ 64 (65)
-.++|..++++.+ |.+..+..+ ..+.+++.+.|...++
T Consensus 115 v~~~P~~~lid~~----G~i~~~~~g-----~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 115 MRGTPSLLLIDKA----GDLRAHHFG-----DVSELLLGAEIATLLG 152 (158)
T ss_dssp CCSSSEEEEECTT----SEEEEEEES-----CCCHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCC----CCEEEEEeC-----CCCHHHHHHHHHHHhc
Confidence 3466766666432 555544432 2356677777766654
No 88
>2xtk_A CHIA1, class III chitinase CHIA1; hydrolase, GH18; HET: AZM; 2.00A {Aspergillus fumigatus} PDB: 2xuc_A 2xvp_A 2xvn_A*
Probab=25.19 E-value=64 Score=19.63 Aligned_cols=25 Identities=12% Similarity=0.365 Sum_probs=21.9
Q ss_pred CCHHHHHHHhhhcCCcEEEEEcccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQSE 31 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~E 31 (65)
..+..+++.+...+.+.++-||.-.
T Consensus 74 ~~l~~~I~~~q~~g~KVllSiGG~~ 98 (310)
T 2xtk_A 74 HQIMEDIPICQAAGKKVLLSIGGAY 98 (310)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEESS
T ss_pred HhHHHHHHHHHhCCCEEEEEeCCCc
Confidence 3478999999999999999999864
No 89
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=25.01 E-value=58 Score=18.77 Aligned_cols=22 Identities=18% Similarity=0.274 Sum_probs=18.6
Q ss_pred CHHHHHHHhhhcCCcEEEEEcc
Q psy14271 8 KLLDQLQYCEDNQIHWCIVIGQ 29 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~vivG~ 29 (65)
.+.+.++.|...|++++++.|.
T Consensus 109 ~~~~~i~~A~~lG~~~v~~~~~ 130 (295)
T 3cqj_A 109 IMRKAIQFAQDVGIRVIQLAGY 130 (295)
T ss_dssp HHHHHHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHHHHHcCCCEEEECCC
Confidence 4788999999999999988654
No 90
>3iab_B Ribonucleases P/MRP protein subunit POP7; RNAse P, ribonuclease P, ribonuclease MRP, POP6, POP6P, POP7, POP7P, NME1, yeast, tRNA; 2.70A {Saccharomyces cerevisiae}
Probab=24.94 E-value=78 Score=17.41 Aligned_cols=21 Identities=14% Similarity=0.230 Sum_probs=14.9
Q ss_pred HHHHHHHhhhcCCcEEEEEcc
Q psy14271 9 LLDQLQYCEDNQIHWCIVIGQ 29 (65)
Q Consensus 9 l~kq~k~A~~~~~~~~vivG~ 29 (65)
..|.++.+++.|..++++.|-
T Consensus 48 i~KlL~~~~k~~~~eV~v~Gm 68 (140)
T 3iab_B 48 INKFLDSVHKQGSSYVAVLGM 68 (140)
T ss_dssp HHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHhhcCCCcEEEEEec
Confidence 455666666668888888775
No 91
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=24.93 E-value=87 Score=17.95 Aligned_cols=24 Identities=4% Similarity=0.123 Sum_probs=21.1
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQS 30 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~ 30 (65)
.++..+.+.|.+.|+..+||....
T Consensus 116 CsF~~Kv~nAq~aGA~avIIyNn~ 139 (194)
T 3icu_A 116 CTFADKIHLAYERGASGAVIFNFP 139 (194)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCT
T ss_pred cCHHHHHHHHHHCCCcEEEEEeCC
Confidence 578999999999999999999653
No 92
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=24.92 E-value=47 Score=18.53 Aligned_cols=27 Identities=11% Similarity=0.143 Sum_probs=21.9
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEEcc
Q psy14271 2 SYKKNPKLLDQLQYCEDNQIHWCIVIGQ 29 (65)
Q Consensus 2 ~~~~~~~l~kq~k~A~~~~~~~~vivG~ 29 (65)
.+. +..+-..+..|.++|+..-|++..
T Consensus 80 ~~~-~~~I~~aL~~Aa~RGV~VRii~D~ 106 (220)
T 4gel_A 80 TFT-SLFLADSIKRALQRGVIIRIISDG 106 (220)
T ss_dssp CBC-CHHHHHHHHHHHHHTCEEEEECCT
T ss_pred EeC-CHHHHHHHHHHHHcCCeEEEEEec
Confidence 444 577888999999999999999843
No 93
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=24.39 E-value=30 Score=18.16 Aligned_cols=19 Identities=26% Similarity=0.620 Sum_probs=14.8
Q ss_pred HHhhhcCCcEEEEEccccc
Q psy14271 14 QYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 14 k~A~~~~~~~~vivG~~E~ 32 (65)
..|+..++||+.+-+..++
T Consensus 62 ~lC~~~~VP~~~v~sk~~L 80 (113)
T 3jyw_G 62 ALCKKMGVPYAIVKGKARL 80 (113)
T ss_dssp HHHHHTTCCCEECSCSTTT
T ss_pred HHHHHcCCCEEEECCHHHH
Confidence 5689999999987665554
No 94
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=24.13 E-value=88 Score=16.48 Aligned_cols=38 Identities=16% Similarity=0.166 Sum_probs=22.2
Q ss_pred cCCcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHHHhhC
Q psy14271 19 NQIHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQEKLKE 65 (65)
Q Consensus 19 ~~~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~~~~~ 65 (65)
.++|.+++|..+ |.+.-+... ..+.+++...|...+.+
T Consensus 145 ~~~P~~~lid~~----G~i~~~~~g-----~~~~~~l~~~l~~ll~~ 182 (183)
T 3lwa_A 145 SVIPTTIVLDKQ----HRPAAVFLR-----EVTSKDVLDVALPLVDE 182 (183)
T ss_dssp TCCSEEEEECTT----SCEEEEECS-----CCCHHHHHHHHHHHHHC
T ss_pred CCCCeEEEECCC----CcEEEEEcC-----CCCHHHHHHHHHHHHhc
Confidence 456766666432 555544432 24677888887777654
No 95
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=23.76 E-value=74 Score=18.60 Aligned_cols=24 Identities=4% Similarity=0.007 Sum_probs=21.6
Q ss_pred HHHHHHHhhhcCCcEEEEEccccc
Q psy14271 9 LLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 9 l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
+.++++.|...|..-++.||+.+.
T Consensus 103 ~~~k~~~A~~~GL~~ivcVge~~e 126 (226)
T 1w0m_A 103 LARLVAKAKSLGLDVVVCAPDPRT 126 (226)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHH
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHH
Confidence 788999999999999999999754
No 96
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=23.74 E-value=54 Score=19.86 Aligned_cols=22 Identities=18% Similarity=0.584 Sum_probs=18.8
Q ss_pred CCHHHHHHHhhhcCCcEEEEEc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIG 28 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG 28 (65)
+|+-+-++.|.+.++|++.++.
T Consensus 143 ~K~~r~ie~A~~~~lPlI~l~d 164 (285)
T 2f9i_B 143 EKICRIIDYCTENRLPFILFSA 164 (285)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEe
Confidence 4677889999999999999873
No 97
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=23.69 E-value=16 Score=18.35 Aligned_cols=16 Identities=6% Similarity=-0.105 Sum_probs=11.3
Q ss_pred CHHHHHHHhhhcCCcE
Q psy14271 8 KLLDQLQYCEDNQIHW 23 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~ 23 (65)
+.+.+++.|...|+|+
T Consensus 53 ~~gsK~~kA~~lgI~I 68 (92)
T 1l7b_A 53 NPGSKLEKARALGVPT 68 (92)
T ss_dssp SSSTTHHHHHCSSSCC
T ss_pred CCChHHHHHHHcCCcE
Confidence 3456778888888774
No 98
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=23.61 E-value=48 Score=20.23 Aligned_cols=23 Identities=0% Similarity=0.079 Sum_probs=19.5
Q ss_pred CCHHHHHHHhhhcCCcEEEEEcc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQ 29 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~ 29 (65)
+++-+-++.|.+.++|.+++.+.
T Consensus 140 ~Ki~r~~e~A~~~~~PvI~l~~s 162 (304)
T 2f9y_B 140 ARFVRAVEQALEDNCPLICFSAS 162 (304)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEECC
Confidence 46778889999999999999864
No 99
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=23.59 E-value=68 Score=18.21 Aligned_cols=20 Identities=20% Similarity=0.277 Sum_probs=17.1
Q ss_pred CHHHHHHHhhhcCCcEEEEE
Q psy14271 8 KLLDQLQYCEDNQIHWCIVI 27 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~viv 27 (65)
.+.+.++.|...|++++++.
T Consensus 89 ~~~~~i~~a~~lGa~~vv~h 108 (270)
T 3aam_A 89 SLADDLEKAALLGVEYVVVH 108 (270)
T ss_dssp HHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEC
Confidence 36788999999999999874
No 100
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=23.52 E-value=67 Score=18.76 Aligned_cols=24 Identities=8% Similarity=0.120 Sum_probs=21.6
Q ss_pred HHHHHHHhhhcCCcEEEEEccccc
Q psy14271 9 LLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 9 l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
+.++++.|...|..-++.||+.+.
T Consensus 106 ~~~k~~~A~~~GL~~ivcVge~~e 129 (225)
T 1hg3_A 106 LEAAIRRAEEVGLMTMVCSNNPAV 129 (225)
T ss_dssp HHHHHHHHHHHTCEEEEEESSHHH
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHH
Confidence 788999999999999999999754
No 101
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=23.25 E-value=65 Score=18.99 Aligned_cols=21 Identities=0% Similarity=-0.141 Sum_probs=17.9
Q ss_pred CHHHHHHHhhhcCCcEEEEEc
Q psy14271 8 KLLDQLQYCEDNQIHWCIVIG 28 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~vivG 28 (65)
.+.+.++.|...|++++++-|
T Consensus 115 ~~~~~i~~A~~lG~~~v~~~~ 135 (305)
T 3obe_A 115 FWKKATDIHAELGVSCMVQPS 135 (305)
T ss_dssp HHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHHHcCCCEEEeCC
Confidence 477889999999999999754
No 102
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=23.23 E-value=79 Score=17.84 Aligned_cols=22 Identities=0% Similarity=0.099 Sum_probs=19.3
Q ss_pred CCHHHHHHHhhhcCCcEEEEEc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIG 28 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG 28 (65)
..+.+.++.|...|++++++..
T Consensus 91 ~~~~~~i~~A~~lGa~~v~~~~ 112 (262)
T 3p6l_A 91 SDWEKMFKFAKAMDLEFITCEP 112 (262)
T ss_dssp THHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEecC
Confidence 5688999999999999999864
No 103
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=23.18 E-value=79 Score=17.95 Aligned_cols=20 Identities=20% Similarity=0.368 Sum_probs=16.9
Q ss_pred CHHHHHHHhhhcCCcEEEEE
Q psy14271 8 KLLDQLQYCEDNQIHWCIVI 27 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~viv 27 (65)
.+.+.++.|...|++++++.
T Consensus 90 ~~~~~i~~A~~lGa~~v~~~ 109 (285)
T 1qtw_A 90 AFIDEMQRCEQLGLSLLNFH 109 (285)
T ss_dssp HHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEC
Confidence 46778999999999999874
No 104
>2hq2_A Putative heme/hemoglobin transport protein; heme oxygenase, structural repeat; HET: HEM; 1.45A {Escherichia coli} SCOP: e.62.1.1 PDB: 1u9t_A
Probab=22.81 E-value=1.5e+02 Score=18.71 Aligned_cols=32 Identities=16% Similarity=0.288 Sum_probs=26.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEEE
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLRN 41 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk~ 41 (65)
...+..-+..|...+.|+.++||.. |.|+|..
T Consensus 235 ~~al~~lL~~aa~~~~pIM~FVgN~----GciQIht 266 (354)
T 2hq2_A 235 NSALAQILESAQQDGNEIMVFVGNR----GCVQIFT 266 (354)
T ss_dssp TTHHHHHHHHHHHHCCCEEEEEECS----SEEEEEE
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCC----ceEEEeC
Confidence 3567888999999999999999986 6677654
No 105
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=22.54 E-value=76 Score=17.66 Aligned_cols=23 Identities=13% Similarity=0.252 Sum_probs=19.7
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEc
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIG 28 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG 28 (65)
+..+...+..|.++|+..-|++.
T Consensus 71 ~~~i~~aL~~aa~rGV~Vrii~D 93 (196)
T 4ggj_A 71 SPQLGRAVQLLHQRGVRVRVITD 93 (196)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEES
T ss_pred CHHHHHHHHHHHHcCCcEEEEEe
Confidence 56788889999999999999983
No 106
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=22.48 E-value=84 Score=17.63 Aligned_cols=20 Identities=15% Similarity=0.119 Sum_probs=17.2
Q ss_pred CHHHHHHHhhhcCCcEEEEE
Q psy14271 8 KLLDQLQYCEDNQIHWCIVI 27 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~viv 27 (65)
.+.+.++.|...|++++++.
T Consensus 77 ~~~~~i~~A~~lGa~~v~~~ 96 (254)
T 3ayv_A 77 RLLFGLDRAAELGADRAVFH 96 (254)
T ss_dssp HHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHhCCCEEEEC
Confidence 46788999999999999875
No 107
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=22.36 E-value=1.2e+02 Score=17.52 Aligned_cols=37 Identities=22% Similarity=0.197 Sum_probs=22.7
Q ss_pred CcEEEEEcccccccCeEEEEEcCCCceeeecHHHHHHHHHH
Q psy14271 21 IHWCIVIGQSELASNSVKLRNVLTREEETISRDKLLDTLQE 61 (65)
Q Consensus 21 ~~~~vivG~~E~~~~~v~vk~~~~~~~~~~~~~e~~~~i~~ 61 (65)
.|.++||.+ +|.|..+.+...-....+.+++...|+.
T Consensus 137 ~p~tfvID~----dG~I~~~~~~~~~~~~pd~~evl~~L~~ 173 (224)
T 3keb_A 137 SPAIILADA----ANVVHYSERLANTRDFFDFDAIEKLLQE 173 (224)
T ss_dssp CCEEEEECT----TCBEEEEEECSBTTCCCCHHHHHHHHHH
T ss_pred cCEEEEEcC----CCEEEEEEecCCCCCCCCHHHHHHHHHH
Confidence 567777744 3777777665443344567777766644
No 108
>3iz5_H 60S ribosomal protein L7A (L7AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_H
Probab=22.30 E-value=24 Score=21.39 Aligned_cols=43 Identities=23% Similarity=0.587 Sum_probs=25.0
Q ss_pred HhhhcCCcEEEEEcccccc-------cCeEEEEEcCCCceeeecHHHHHHHH
Q psy14271 15 YCEDNQIHWCIVIGQSELA-------SNSVKLRNVLTREEETISRDKLLDTL 59 (65)
Q Consensus 15 ~A~~~~~~~~vivG~~E~~-------~~~v~vk~~~~~~~~~~~~~e~~~~i 59 (65)
.|.+.|+||++|-|...+. .-.|.+.+.+.++. -.++.+++.+
T Consensus 165 LC~k~gVPY~iVk~KarLG~~vgrKtct~Va~t~v~~eDk--~aLakLveai 214 (258)
T 3iz5_H 165 LCRKMEVPYCIVKGKARLGSIVHKKTASVLCLTTVKNEDK--LEFSKILEAI 214 (258)
T ss_dssp HHTTTTCCEEEESCHHHHHHHTTCSSCCSEEEEESCCSCC--HHHHHHHHHH
T ss_pred HHHhcCCCeEEECCHHHHHHHhCCccceEEEEEecCHHHH--HHHHHHHHHH
Confidence 4789999999987665541 22466666543322 2344444443
No 109
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=22.28 E-value=75 Score=18.07 Aligned_cols=20 Identities=15% Similarity=0.310 Sum_probs=17.1
Q ss_pred CHHHHHHHhhhcCCcEEEEE
Q psy14271 8 KLLDQLQYCEDNQIHWCIVI 27 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~viv 27 (65)
.+.+.++.|...|++++++.
T Consensus 90 ~~~~~i~~A~~lG~~~v~~~ 109 (287)
T 2x7v_A 90 LLKKEVEICRKLGIRYLNIH 109 (287)
T ss_dssp HHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEe
Confidence 46788999999999999874
No 110
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=22.12 E-value=51 Score=16.01 Aligned_cols=24 Identities=8% Similarity=-0.047 Sum_probs=19.2
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcc
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQ 29 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~ 29 (65)
..++..-++.-...+++++.++.+
T Consensus 78 ~~~l~~~~~~~~~~~~~~l~Vvd~ 101 (122)
T 3kpb_A 78 DEPVDHVAIKMSKYNISGVPVVDD 101 (122)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECT
T ss_pred CCCHHHHHHHHHHhCCCeEEEECC
Confidence 467788888888889999999854
No 111
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=22.11 E-value=82 Score=19.45 Aligned_cols=24 Identities=17% Similarity=0.128 Sum_probs=19.0
Q ss_pred HHHHHHHhhhcCCcEEEEEccccc
Q psy14271 9 LLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 9 l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
..+-++...+.++..++++|.++-
T Consensus 83 ~~~~~~~l~~~~Id~LvvIGGdgS 106 (320)
T 1pfk_A 83 RAVAIENLKKRGIDALVVIGGDGS 106 (320)
T ss_dssp HHHHHHHHHHTTCCEEEEEECHHH
T ss_pred HHHHHHHHHHcCCCEEEEECCCch
Confidence 456666678899999999998754
No 112
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=22.11 E-value=93 Score=16.01 Aligned_cols=25 Identities=20% Similarity=0.356 Sum_probs=19.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEccc
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQS 30 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~ 30 (65)
...+-..+..|.++|++.-+++...
T Consensus 39 ~~~i~~aL~~a~~rGV~Vril~~~~ 63 (155)
T 1byr_A 39 APDIMKALVAAKKRGVDVKIVIDER 63 (155)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEST
T ss_pred CHHHHHHHHHHHHCCCEEEEEEeCc
Confidence 4567778888888999999998654
No 113
>2hvm_A Hevamine; hydrolase, chitinase/lysozyme; 1.80A {Hevea brasiliensis} SCOP: c.1.8.5 PDB: 1hvq_A* 1llo_A 1kr0_A* 1kr1_A* 1kqy_A* 1kqz_A*
Probab=22.01 E-value=1e+02 Score=18.30 Aligned_cols=24 Identities=13% Similarity=0.308 Sum_probs=21.4
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQS 30 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~ 30 (65)
..+..+++.+...|.+.++-||.-
T Consensus 58 ~~~~~~i~~~q~~g~KVllSiGG~ 81 (273)
T 2hvm_A 58 TIVSNGIRSCQIQGIKVMLSLGGG 81 (273)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEECS
T ss_pred HHHHHHHHHHHcCCCEEEEEeCCC
Confidence 467899999999999999999985
No 114
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=21.87 E-value=86 Score=17.95 Aligned_cols=20 Identities=15% Similarity=0.127 Sum_probs=17.6
Q ss_pred CHHHHHHHhhhcCCcEEEEE
Q psy14271 8 KLLDQLQYCEDNQIHWCIVI 27 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~viv 27 (65)
.+.+.++.|...|++++++.
T Consensus 91 ~~~~~i~~a~~lG~~~v~~~ 110 (301)
T 3cny_A 91 AFEKHCQYLKAINAPVAVVS 110 (301)
T ss_dssp HHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEec
Confidence 46788999999999999886
No 115
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=21.85 E-value=90 Score=18.60 Aligned_cols=21 Identities=14% Similarity=0.313 Sum_probs=16.6
Q ss_pred HHHHHHHhhhcCCcEEEEEcc
Q psy14271 9 LLDQLQYCEDNQIHWCIVIGQ 29 (65)
Q Consensus 9 l~kq~k~A~~~~~~~~vivG~ 29 (65)
+.+-++.+...++.++|+.|+
T Consensus 50 l~~lv~~~~~~~~D~vliaGD 70 (336)
T 2q8u_A 50 LDKVVEEAEKREVDLILLTGD 70 (336)
T ss_dssp HHHHHHHHHHHTCSEEEEESC
T ss_pred HHHHHHHHHHhCCCEEEECCc
Confidence 556667777888898888888
No 116
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp}
Probab=21.81 E-value=82 Score=19.11 Aligned_cols=24 Identities=8% Similarity=0.171 Sum_probs=20.6
Q ss_pred CHHHHHHHhhhcCCcEEEEEcccc
Q psy14271 8 KLLDQLQYCEDNQIHWCIVIGQSE 31 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~vivG~~E 31 (65)
.+.++++.+.++|++.++.||.-.
T Consensus 67 ~~~~~i~~~k~~g~kvllsiGG~~ 90 (321)
T 3ian_A 67 EFRAEISKLNAEGKSVLIALGGAD 90 (321)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEETT
T ss_pred hHHHHHHHHHHCCCEEEEEeccCC
Confidence 477899999999999999998753
No 117
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=21.72 E-value=85 Score=19.38 Aligned_cols=24 Identities=21% Similarity=0.263 Sum_probs=19.1
Q ss_pred HHHHHHHhhhcCCcEEEEEccccc
Q psy14271 9 LLDQLQYCEDNQIHWCIVIGQSEL 32 (65)
Q Consensus 9 l~kq~k~A~~~~~~~~vivG~~E~ 32 (65)
..+-++...+.++..++++|.++-
T Consensus 82 ~~~~~~~l~~~~Id~LvvIGGdgS 105 (319)
T 1zxx_A 82 QLAGIEQLKKHGIDAVVVIGGDGS 105 (319)
T ss_dssp HHHHHHHHHHTTCCEEEEEECHHH
T ss_pred HHHHHHHHHHhCCCEEEEECCchH
Confidence 456666778899999999998654
No 118
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=21.56 E-value=89 Score=17.84 Aligned_cols=22 Identities=14% Similarity=0.300 Sum_probs=12.9
Q ss_pred HHHHHHHhhhcCCcEEEEEccc
Q psy14271 9 LLDQLQYCEDNQIHWCIVIGQS 30 (65)
Q Consensus 9 l~kq~k~A~~~~~~~~vivG~~ 30 (65)
+.+.++.+...++.++|+.|+-
T Consensus 40 l~~~~~~~~~~~~d~vi~~GD~ 61 (322)
T 2nxf_A 40 LRDAVLQWRRERVQCVVQLGDI 61 (322)
T ss_dssp HHHHHHHHHHTTCSEEEECSCC
T ss_pred HHHHHHHHHhcCCCEEEECCCc
Confidence 4444444455667777777664
No 119
>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A
Probab=21.33 E-value=66 Score=16.73 Aligned_cols=15 Identities=7% Similarity=0.222 Sum_probs=12.2
Q ss_pred HHHHHHHhhhcCCcE
Q psy14271 9 LLDQLQYCEDNQIHW 23 (65)
Q Consensus 9 l~kq~k~A~~~~~~~ 23 (65)
.+.+++.|...|+|+
T Consensus 60 ~gsKl~kA~~lgI~I 74 (113)
T 2cok_A 60 MNKKMEEVKEANIRV 74 (113)
T ss_dssp CCHHHHHHHHTTCCE
T ss_pred CChHHHHHHHCCCcE
Confidence 457889999999884
No 120
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=21.00 E-value=83 Score=17.77 Aligned_cols=21 Identities=5% Similarity=0.203 Sum_probs=17.8
Q ss_pred CCHHHHHHHhhhcCCcEEEEE
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVI 27 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~viv 27 (65)
..+.+.++.|...|++++++.
T Consensus 89 ~~~~~~i~~A~~lGa~~v~~~ 109 (257)
T 3lmz_A 89 EEIDRAFDYAKRVGVKLIVGV 109 (257)
T ss_dssp HHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEec
Confidence 357888999999999999974
No 121
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus}
Probab=20.82 E-value=1e+02 Score=18.32 Aligned_cols=23 Identities=9% Similarity=0.157 Sum_probs=20.1
Q ss_pred CHHHHHHHhhhcCCcEEEEEccc
Q psy14271 8 KLLDQLQYCEDNQIHWCIVIGQS 30 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~vivG~~ 30 (65)
.+..+++.+.+.|.+.++-||.-
T Consensus 73 ~~~~~i~~~k~~g~kvllSiGG~ 95 (290)
T 2y8v_A 73 PLWAEVPVLKRSGVKVMGMLGGA 95 (290)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECS
T ss_pred HHHHHHHHHHHCCCEEEEEECCC
Confidence 35789999999999999999985
No 122
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=20.79 E-value=59 Score=16.09 Aligned_cols=25 Identities=20% Similarity=0.266 Sum_probs=18.9
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEccc
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQS 30 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~ 30 (65)
+.++..-++.-.+.+++.+.++.+.
T Consensus 84 ~~~l~~a~~~m~~~~~~~lpVvd~~ 108 (127)
T 3nqr_A 84 SKRVDRMLKEFRSQRYHMAIVIDEF 108 (127)
T ss_dssp TCBHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcHHHHHHHHHhcCCeEEEEEeCC
Confidence 4567777777788899999988543
No 123
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=20.41 E-value=88 Score=17.59 Aligned_cols=22 Identities=9% Similarity=-0.077 Sum_probs=18.3
Q ss_pred CHHHHHHHhhhcCCcEEEEEcc
Q psy14271 8 KLLDQLQYCEDNQIHWCIVIGQ 29 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~vivG~ 29 (65)
.+.+.++.|...|++++++.+.
T Consensus 86 ~~~~~i~~a~~lG~~~v~~~~g 107 (272)
T 2q02_A 86 KTEGLLRDAQGVGARALVLCPL 107 (272)
T ss_dssp HHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHhCCCEEEEccC
Confidence 4678899999999999998543
No 124
>2gsj_A Protein PPL-2; mimosoideae, chimerolectin, endochitinase, glycosyl hydrolase family 18, equilibrium sedimentation, X-RAY; 1.73A {Parkia platycephala}
Probab=20.36 E-value=1.1e+02 Score=18.19 Aligned_cols=24 Identities=21% Similarity=0.415 Sum_probs=21.5
Q ss_pred CCHHHHHHHhhhcCCcEEEEEccc
Q psy14271 7 PKLLDQLQYCEDNQIHWCIVIGQS 30 (65)
Q Consensus 7 ~~l~kq~k~A~~~~~~~~vivG~~ 30 (65)
..+..+++.+...+.+.++-||.-
T Consensus 58 ~~~~~~i~~lq~~g~KVllSiGG~ 81 (271)
T 2gsj_A 58 RTVSDGIRACQRRGIKVMLSIGGG 81 (271)
T ss_dssp TTHHHHHHHHHTTTCEEEEEEECS
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCC
Confidence 467899999999999999999986
No 125
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=20.25 E-value=1.1e+02 Score=18.17 Aligned_cols=21 Identities=10% Similarity=0.359 Sum_probs=13.7
Q ss_pred HHHHHHhhhcCCcEEEEEccc
Q psy14271 10 LDQLQYCEDNQIHWCIVIGQS 30 (65)
Q Consensus 10 ~kq~k~A~~~~~~~~vivG~~ 30 (65)
.+-++.+...++.++++.|+-
T Consensus 30 ~~~~~~~~~~~~D~vl~~GDl 50 (333)
T 1ii7_A 30 KNALEIAVQENVDFILIAGDL 50 (333)
T ss_dssp HHHHHHHHHTTCSEEEEESCS
T ss_pred HHHHHHHHhcCCCEEEECCCc
Confidence 444556666777777777763
No 126
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=20.14 E-value=86 Score=18.23 Aligned_cols=20 Identities=10% Similarity=0.001 Sum_probs=16.9
Q ss_pred CHHHHHHHhhhcCCcEEEEE
Q psy14271 8 KLLDQLQYCEDNQIHWCIVI 27 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~viv 27 (65)
.+.+.++.|...|++++++.
T Consensus 95 ~~~~~i~~A~~lGa~~vv~h 114 (303)
T 3aal_A 95 FLRAEIERTEAIGAKQLVLH 114 (303)
T ss_dssp HHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEC
Confidence 36778899999999999874
No 127
>2j0p_A HEMS, hemin transport protein HEMS; conformational changes, HAEM, iron, trans ION transport, proteobacteria, iron transport; HET: HEM 12P; 1.7A {Yersinia enterocolitica} SCOP: e.62.1.1 PDB: 2j0r_A*
Probab=20.10 E-value=1.7e+02 Score=18.40 Aligned_cols=31 Identities=23% Similarity=0.337 Sum_probs=25.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEEcccccccCeEEEE
Q psy14271 6 NPKLLDQLQYCEDNQIHWCIVIGQSELASNSVKLR 40 (65)
Q Consensus 6 ~~~l~kq~k~A~~~~~~~~vivG~~E~~~~~v~vk 40 (65)
...+..-+..|...+.|+.++||.. |.|.+.
T Consensus 226 ~~al~~lL~~aa~~~~pIm~fVgN~----GciQIh 256 (345)
T 2j0p_A 226 NSSLTQLLNIAQQEQNEIMIFVGNR----GCVQIF 256 (345)
T ss_dssp TTHHHHHHHHHHHHCCCEEEEEECS----SEEEEE
T ss_pred HHHHHHHHHHHHhcCCcEEEEEcCC----CEEEEE
Confidence 3567888999999999999999886 566554
No 128
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=20.09 E-value=99 Score=17.70 Aligned_cols=20 Identities=5% Similarity=0.077 Sum_probs=17.3
Q ss_pred CHHHHHHHhhhcCCcEEEEE
Q psy14271 8 KLLDQLQYCEDNQIHWCIVI 27 (65)
Q Consensus 8 ~l~kq~k~A~~~~~~~~viv 27 (65)
.+.+.++.|...|++++++.
T Consensus 105 ~~~~~i~~a~~lGa~~v~~~ 124 (287)
T 3kws_A 105 TMKEIIAAAGELGSTGVIIV 124 (287)
T ss_dssp HHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEe
Confidence 46788999999999999884
Done!