BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14272
(194 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|91081131|ref|XP_975541.1| PREDICTED: similar to regulator of telomere elongation helicase 1
rtel1 [Tribolium castaneum]
Length = 861
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 80/122 (65%), Gaps = 2/122 (1%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
EVP+ F FPF Y IQ FM+NL+ ++N KFGIFESPTGTGKSLS++CG ++W DH +
Sbjct: 2 EVPNNFEFPFQPYPIQHAFMRNLFEVIENKKFGIFESPTGTGKSLSILCGAIRWLKDHNM 61
Query: 80 VGLEKIEAKIKDLEISKNETV--SEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIEN 137
E ++ +I++LE+ K + S DW+ Q+ E+ + QI+ LK YD+ IE+
Sbjct: 62 YERENLKLQIEELELKKRKVSGNSSDWLSAQAQEIDLNRQINELKIRQNKIDEYDKKIES 121
Query: 138 IR 139
+R
Sbjct: 122 LR 123
>gi|270006445|gb|EFA02893.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Tribolium
castaneum]
Length = 817
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 80/122 (65%), Gaps = 2/122 (1%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
EVP+ F FPF Y IQ FM+NL+ ++N KFGIFESPTGTGKSLS++CG ++W DH +
Sbjct: 2 EVPNNFEFPFQPYPIQHAFMRNLFEVIENKKFGIFESPTGTGKSLSILCGAIRWLKDHNM 61
Query: 80 VGLEKIEAKIKDLEISKNETV--SEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIEN 137
E ++ +I++LE+ K + S DW+ Q+ E+ + QI+ LK YD+ IE+
Sbjct: 62 YERENLKLQIEELELKKRKVSGNSSDWLSAQAQEIDLNRQINELKIRQNKIDEYDKKIES 121
Query: 138 IR 139
+R
Sbjct: 122 LR 123
>gi|307191862|gb|EFN75286.1| Probable ATP-dependent RNA helicase DDX11 [Harpegnathos saltator]
Length = 862
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 97/167 (58%), Gaps = 12/167 (7%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
E+P EFPFPF AY+IQ FMK LY L+ K G+FESPTGTGKSLSLICG LKW DH+
Sbjct: 2 ELPQEFPFPFPAYEIQKQFMKELYNCLEGGKLGLFESPTGTGKSLSLICGALKWLVDHEK 61
Query: 80 VGLEKIEAKIKDLE--ISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIEN 137
+++ + I +++ I E S+DW Q+ ++ Q++A K K Q + ++E
Sbjct: 62 YKKQELSSVISEIDDKIKNCEKPSDDWFSVQTEQI----QLNAEKQ--KFQAKLNAILE- 114
Query: 138 IRKQNEKRKKSLRNDQEVKVHA---LTYRNRMDEKNSKEKRKEEERD 181
+ EK KK + ++ K A + + R+ +K S + K EE D
Sbjct: 115 FESEKEKFKKIIELNKTSKTKATQKVRQQFRISQKKSTDHSKTEEVD 161
>gi|332029639|gb|EGI69528.1| Putative ATP-dependent RNA helicase DDX11-like protein [Acromyrmex
echinatior]
Length = 857
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 90/167 (53%), Gaps = 22/167 (13%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK- 78
E+P EFPFPF AY+IQ FM+ LY L + K G+FESPTGTGKSLSLICG LKW DH+
Sbjct: 2 ELPQEFPFPFPAYEIQKRFMRELYACLKDGKLGLFESPTGTGKSLSLICGALKWLVDHER 61
Query: 79 ------IVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYD 132
I + KI+ K+K E +S++W Q+ ++++ + L+ L + Y+
Sbjct: 62 WRKEELISTIAKIDDKLKSC-----EKLSDNWFTVQTEQIELNAEKQPLQAKLNALLEYE 116
Query: 133 ELIENIRKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEE 179
Q EK KK + + K+ T + R K E K EE
Sbjct: 117 -------GQREKLKKMIVESKRAKI---TRKMRQQFKRVPESDKTEE 153
>gi|383850034|ref|XP_003700633.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Megachile rotundata]
Length = 861
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 92/165 (55%), Gaps = 9/165 (5%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
EFPFPF Y IQ FMK LY L+N+K GIFESPTGTGKS+S+ICG LKW DH+
Sbjct: 6 EFPFPFPPYSIQVQFMKELYNCLENAKLGIFESPTGTGKSMSIICGALKWLLDHEEFQKN 65
Query: 84 KIEAKIKDLE--ISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYD-------EL 134
++ I D E I K S +W Q+ ++++ ++ L+ L S Y+ E
Sbjct: 66 QLTKAISDFEEKIKKCTNSSTNWFSVQTEQIQLNSEKQILQTKLNSILQYERKKNGLKEA 125
Query: 135 IENIRKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEE 179
++N+ K+ ++ S N + + T +N ++++K+ EEE
Sbjct: 126 VKNVDKKKKRFGPSKPNQGKTQTETQTEKNAPVDEDNKDTIIEEE 170
>gi|242025010|ref|XP_002432919.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518428|gb|EEB20181.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 852
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVG 81
P +FPFPF+ Y IQ++ MKNLY L+ K GIFESPTGTGKS+SLICG LKW D +
Sbjct: 11 PEKFPFPFNPYLIQNDLMKNLYEALEGKKLGIFESPTGTGKSMSLICGSLKWLLDAQERI 70
Query: 82 LEKIEAKIKDL-EISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIEN 137
+E IK+L + KN ++ +W+E+ S K+R++ D L++ L + IEN
Sbjct: 71 KNDLELNIKNLNDELKNTSLGSNWLEEHSSLTKLRHKRDQLQNELNRVLNMENRIEN 127
>gi|340378232|ref|XP_003387632.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Amphimedon queenslandica]
Length = 886
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
E P++FPFPF Y IQ++FM++LY TL+ K G+FESPTGTGKSLS+ICG LKW DH+
Sbjct: 5 EAPADFPFPFKPYSIQTDFMRSLYSTLEEGKVGLFESPTGTGKSLSIICGCLKWLMDHQE 64
Query: 80 VGLEKIEAKIK-DLEI----SKNE--TVSEDWIEQQSFELKMRNQIDALKDALKSQKTYD 132
++ EA + D+ + KNE +V +DW + ++R++ +K A +K
Sbjct: 65 KETKRCEAILSGDVSVLPLSDKNEKKSVVDDWFAEYDQRKRLRDEAFKMKLAADKRKQRQ 124
Query: 133 ELIENIRKQN-----EKRKKSLRNDQ 153
E I ++++ KR+ +++N++
Sbjct: 125 ERISLLKERYGTSLFSKRQATVKNEK 150
>gi|193608349|ref|XP_001949260.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Acyrthosiphon pisum]
Length = 890
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 4/136 (2%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
E PS FPFPF Y IQ +FM +Y ++ K GIFESPTGTGK+LS+ICG ++W DH+
Sbjct: 17 ETPSTFPFPFTPYGIQHDFMTEIYSAIEGRKLGIFESPTGTGKTLSIICGAVRWLLDHEN 76
Query: 80 VGLEKIEAKIKDLEISKNET----VSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELI 135
+++ ++ L + ET +DWI Q+ ++ + ++ + LKS + ++ I
Sbjct: 77 REWNQLKLALESLTMKNGETNDDDDDDDWIAGQAKLVEQQRKVYEINKMLKSLEEFNNNI 136
Query: 136 ENIRKQNEKRKKSLRN 151
E I+K+ E +K +++
Sbjct: 137 EKIKKEQEFKKNKVKS 152
>gi|443709796|gb|ELU04301.1| hypothetical protein CAPTEDRAFT_175213 [Capitella teleta]
Length = 875
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 7/94 (7%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH-- 77
EVP++F FPF+ Y IQ FM NLY ++ + GIFESPTGTGKSLSLICG L W D+
Sbjct: 2 EVPAKFAFPFEPYGIQEAFMHNLYSAIEGGQMGIFESPTGTGKSLSLICGALTWLQDYEE 61
Query: 78 ----KIVGLEKIEAKIKDLEISKNETVSEDWIEQ 107
++ L I+ +IK IS+ V DW++Q
Sbjct: 62 KQRNELEALLSIKQEIKKY-ISRYAFVEPDWVQQ 94
>gi|198436769|ref|XP_002122486.1| PREDICTED: similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide
11 [Ciona intestinalis]
Length = 907
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 11/93 (11%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIV 80
PS+F FPF+ Y IQ +FMK+LY+ +++ K GIFESPTGTGKSLSLICG L W DH+
Sbjct: 13 APSKFAFPFEPYSIQVDFMKSLYHAIEDKKIGIFESPTGTGKSLSLICGSLTWLKDHE-- 70
Query: 81 GLEKIEAKIKDL------EISKNETVSEDWIEQ 107
E+ E + +++ E SK ET DWI++
Sbjct: 71 --EREEKRCQEITNKLTTEKSK-ETCDFDWIQE 100
>gi|380016559|ref|XP_003692248.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Apis
florea]
Length = 856
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 63/99 (63%), Gaps = 4/99 (4%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
EFPFPF Y IQ+ FMK LY L+N+K GIFESPTGTGKS+S+ICG LKW D++
Sbjct: 6 EFPFPFSPYLIQNQFMKELYKCLENAKLGIFESPTGTGKSMSIICGALKWLLDYEEQQRN 65
Query: 84 KIEAKIKDL--EISKNETVSEDW--IEQQSFELKMRNQI 118
++ I +L +I + S +W ++ Q EL + QI
Sbjct: 66 QLTTAISELDQQIKQYNNSSINWFFVQSQQIELNSKRQI 104
>gi|432863481|ref|XP_004070088.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Oryzias latipes]
Length = 859
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 40/53 (75%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
FPFP+ YDIQ FM+ LY LD SK GIFESPTGTGKSLSLICG L W DH
Sbjct: 8 FPFPYQPYDIQEQFMQALYRALDQSKVGIFESPTGTGKSLSLICGALSWLRDH 60
>gi|158301911|ref|XP_321585.4| AGAP001537-PA [Anopheles gambiae str. PEST]
gi|157012699|gb|EAA01808.4| AGAP001537-PA [Anopheles gambiae str. PEST]
Length = 910
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 64/105 (60%), Gaps = 7/105 (6%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGL 82
S+F FPF YDIQ +FMK LY + + GIFESPTGTGKSLSL CG L W D+ +
Sbjct: 17 SDFAFPFLPYDIQLDFMKTLYTVIHSGGIGIFESPTGTGKSLSLTCGTLTWLKDYVRLME 76
Query: 83 EKIEAKIKDL--EISK----NETVSEDWIEQQSFELKMRNQIDAL 121
+++ KI L EI++ NE+ S DWI Q + R ++D L
Sbjct: 77 TELQEKIARLRAEIARLEKENES-SSDWISGQYSAMGQRKELDEL 120
>gi|449674800|ref|XP_002169756.2| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Hydra
magnipapillata]
Length = 827
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 51/66 (77%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
+F FPF+ YDIQ +FM LY TL N K GIFESPTGTGKSLSLICG L+W +D++I E
Sbjct: 225 DFEFPFEPYDIQKSFMSTLYETLQNDKIGIFESPTGTGKSLSLICGSLRWLFDYEIEKEE 284
Query: 84 KIEAKI 89
KI++ I
Sbjct: 285 KIKSII 290
>gi|170029991|ref|XP_001842874.1| fanconi anemia group J protein [Culex quinquefasciatus]
gi|167865334|gb|EDS28717.1| fanconi anemia group J protein [Culex quinquefasciatus]
Length = 873
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
E S+F FPF YDIQ + M++LY ++ + GIFESPTGTGKSL+L CG+L W DH+
Sbjct: 13 ESGSQFSFPFPPYDIQLDLMRSLYTVVERGQVGIFESPTGTGKSLTLTCGVLSWLRDHEA 72
Query: 80 VG----LEKIEAKIKDLEISKNETVSE-DWIEQQSFELKMRNQIDALKDA 124
+ E+IEA ++ + ET DWI Q + ++ Q+ LK
Sbjct: 73 LVERELTERIEALRGEIGRLERETAGAVDWISGQFETIGIKKQLGELKGV 122
>gi|55925522|ref|NP_001007320.1| probable ATP-dependent RNA helicase DDX11 [Danio rerio]
gi|55250690|gb|AAH85645.1| Zgc:92172 [Danio rerio]
Length = 890
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 87/162 (53%), Gaps = 14/162 (8%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH----KIV 80
FPFPF Y IQ +FM+ LY LD K GIFESPTGTGKSLSLICG L W D+ K
Sbjct: 8 FPFPFQPYPIQESFMEALYTALDQRKVGIFESPTGTGKSLSLICGALTWLRDYEEQRKQE 67
Query: 81 GLEKIEAKIKDLEISKNETVSE-----DWIEQQSFELKMRNQIDALKDALKSQKTYDELI 135
+E + KD ++ K + + DW+ + + R+ ++ LKD +K +E +
Sbjct: 68 AARLLEGQ-KDSDVVKEKNSNSGPPEPDWVSEFVQKKAERDMVNKLKDEELKRKKREERL 126
Query: 136 ENIRKQNEKR----KKSLRNDQEVKVHALTYRNRMDEKNSKE 173
E IR + R +K+ +D+ VK+ L+ E +S E
Sbjct: 127 EMIRHNAQLRYAMKRKADEDDEAVKLLQLSREGSEPETHSPE 168
>gi|321479246|gb|EFX90202.1| hypothetical protein DAPPUDRAFT_190335 [Daphnia pulex]
Length = 898
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 51/73 (69%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
+VP F FPF+ Y IQ +FMK+LY ++ K GIFESPTGTGKSLSLICG L W DH+
Sbjct: 2 DVPEGFRFPFEPYPIQLDFMKSLYKCIEQGKLGIFESPTGTGKSLSLICGALTWLADHEC 61
Query: 80 VGLEKIEAKIKDL 92
++E K+K L
Sbjct: 62 HQKSQLEEKLKIL 74
>gi|126340221|ref|XP_001373024.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
[Monodelphis domestica]
Length = 902
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 74/143 (51%), Gaps = 22/143 (15%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
FPFP+ Y IQ +FM LY+ L+ K GIFESPTGTGKSLSLICG L W D + +
Sbjct: 11 HFPFPYTPYSIQKDFMTELYHVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKQQ 70
Query: 84 KIEAKIKDLEI--------SKNETVSE-------------DWIEQQSFELKMRNQIDALK 122
+ EA++ DL I S N T + DWI Q + + R+ ID L+
Sbjct: 71 E-EARLLDLGIAPPNHLEESPNHTSTSQRASDALRPSGEPDWIAQFVQKKEERDMIDRLR 129
Query: 123 DALKSQKTYDELIENIRKQNEKR 145
D +K +E ++ IR R
Sbjct: 130 DEQVKRKKREERLQQIRHNAHLR 152
>gi|405976070|gb|EKC40591.1| Putative ATP-dependent RNA helicase DDX11 [Crassostrea gigas]
Length = 921
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 63/99 (63%), Gaps = 17/99 (17%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK----- 78
+FPFPF YD+Q FM+NLY L+ + GIFESPTGTGKSLSLICG LKW +++
Sbjct: 33 DFPFPFKPYDVQKKFMENLYLCLEKGQVGIFESPTGTGKSLSLICGALKWLKEYQASWGL 92
Query: 79 ---IVGLEKIEAKIKDLE--ISKNETVSE-------DWI 105
++ +KIE + K+LE I++ +T S DWI
Sbjct: 93 LKNVLIPQKIEKQKKELEELIAEEKTSSSEGASGEMDWI 131
>gi|312375220|gb|EFR22635.1| hypothetical protein AND_14424 [Anopheles darlingi]
Length = 894
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 7/104 (6%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
EF FPF Y+IQ +FMK+LY L + GIFESPTGTGKSLSL CG L W D + + E
Sbjct: 18 EFAFPFPPYEIQLDFMKSLYGVLQSGGIGIFESPTGTGKSLSLTCGSLTWLKDFERLLEE 77
Query: 84 KIEAKIKDL--EIS----KNETVSEDWIEQQSFELKMRNQIDAL 121
++ +KI L EI+ KNE V+ DWI Q + R ++ L
Sbjct: 78 ELGSKIVQLRTEIAALEKKNE-VASDWITGQYNAMGQRKELGEL 120
>gi|410348526|gb|JAA40867.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 972
Score = 89.0 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/183 (33%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
IE L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLIETGTGSLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKA 132
Query: 124 ALKSQKTYDELIENI--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERD 181
+K +E ++ + R Q + K LR ++E + L M E + +R E+
Sbjct: 133 EQARRKQREERLQQLQHRVQLKYAAKRLRQEEEETENLLRLSREMLETGPEAERLEQLES 192
Query: 182 GLE 184
G E
Sbjct: 193 GEE 195
>gi|332839867|ref|XP_003313867.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 3 [Pan
troglodytes]
Length = 972
Score = 89.0 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/183 (33%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
IE L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLIETGTGSLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKA 132
Query: 124 ALKSQKTYDELIENI--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERD 181
+K +E ++ + R Q + K LR ++E + L M E + +R E+
Sbjct: 133 EQARRKQREERLQQLQHRVQLKYAAKRLRQEEEETENLLRLSREMLETGPEAERLEQLES 192
Query: 182 GLE 184
G E
Sbjct: 193 GEE 195
>gi|157123196|ref|XP_001660054.1| regulator of telomere elongation helicase 1 rtel1 [Aedes aegypti]
gi|108874458|gb|EAT38683.1| AAEL009438-PA [Aedes aegypti]
Length = 873
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 26/170 (15%)
Query: 25 FPFPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH-KIVG- 81
F FPF Y IQ + M++LY T++N + GIFESPTGTGKSL+L CG+L W D+ ++VG
Sbjct: 17 FQFPFATPYSIQLDLMRSLYSTVENRQVGIFESPTGTGKSLTLTCGVLSWLRDYEEVVGR 76
Query: 82 --LEKIE-AKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENI 138
+EKIE K + + + + + DWI Q + +R ++ LK Y + +E
Sbjct: 77 ELVEKIEWLKGEVVRLERETAGAVDWISGQFETMGIRKELGELKGVKDLMDEYGKRLE-- 134
Query: 139 RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERDGLENETQ 188
E+KV ++ + R K + + +K++E +GLE E Q
Sbjct: 135 ---------------ELKVKSMKVKKR---KFANKVKKDKEENGLETENQ 166
>gi|384500829|gb|EIE91320.1| hypothetical protein RO3G_16031 [Rhizopus delemar RA 99-880]
Length = 336
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 62/105 (59%), Gaps = 11/105 (10%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
F FPF+ Y IQ +FM NLY L K GIFESPTGTGKSLSLICG LKW D ++
Sbjct: 8 FGFPFEPYPIQKDFMSNLYNALSQEKIGIFESPTGTGKSLSLICGSLKWLQDQEVK---- 63
Query: 85 IEAKIKDLEISKNETVSEDWI---EQQSFELKMRNQIDALKDALK 126
KI+ +E NE DW+ + S+E + R +I+ K LK
Sbjct: 64 -TTKIQSVESKDNEP---DWVTAFQGNSYEDRKREEIERKKAELK 104
>gi|410907467|ref|XP_003967213.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Takifugu rubripes]
Length = 979
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 40/54 (74%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
++FPFP+ YDIQ FM+ LY LD K GIFESPTGTGKSLSLICG L W D
Sbjct: 95 TQFPFPYQPYDIQQQFMQALYSALDQGKVGIFESPTGTGKSLSLICGALSWLTD 148
>gi|51258193|gb|AAH79952.1| DDX11 protein, partial [Xenopus (Silurana) tropicalis]
Length = 227
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 83/153 (54%), Gaps = 23/153 (15%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH------- 77
FPFP++ Y IQ FM+ LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 33 FPFPYEPYPIQEQFMEKLYQALEAGKVGIFESPTGTGKSLSLICGALTWLQDFETKKRQE 92
Query: 78 --KIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELI 135
+ + + E K KD S E DWI Q F ++M+ ++D +K+ +K ++
Sbjct: 93 EAQALSVADTELKEKDTSASSTEP---DWIAQ--F-VQMKEEMD-IKNKIKEEQLR---- 141
Query: 136 ENIRKQNEKRKKSLRNDQEVKVHALTYRNRMDE 168
RK+ E+ K ++++ ++K + R DE
Sbjct: 142 ---RKKREEHLKQMKHNVQLKFASKRKREEDDE 171
>gi|241623166|ref|XP_002407530.1| conserved hypothetical protein [Ixodes scapularis]
gi|215501005|gb|EEC10499.1| conserved hypothetical protein [Ixodes scapularis]
Length = 348
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 76/129 (58%), Gaps = 6/129 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
F FPF+ Y +Q FMK LY L++ K GIFESPTGTGKSLS+IC L W +
Sbjct: 9 FNFPFEPYLVQLTFMKTLYKALEDGKVGIFESPTGTGKSLSIICASLAWLKEFNSRNKAS 68
Query: 85 IEAKIKDL--EISKNETVSEDWIEQQSFELKMRNQ---IDALKDA-LKSQKTYDELIENI 138
+E+++ +L +IS DWI + + + R + + ++DA LK +K Y++L + +
Sbjct: 69 LESEVTELTRQISLPADAESDWITRDAENIARRCRLRDVQIIRDALLKKEKKYEDLKDKV 128
Query: 139 RKQNEKRKK 147
+++ +R +
Sbjct: 129 KRRITERAR 137
>gi|348506178|ref|XP_003440637.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Oreochromis niloticus]
Length = 897
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 41/55 (74%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
+EFPFP+ Y+IQ FM+ LY LD K GIFESPTGTGKSLSLICG L W D+
Sbjct: 6 AEFPFPYQPYNIQEEFMQALYSALDKGKVGIFESPTGTGKSLSLICGALSWLRDY 60
>gi|361125732|gb|EHK97761.1| putative ATP-dependent RNA helicase CHL1 [Glarea lozoyensis 74030]
Length = 215
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 13 NEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILK 72
E+ AE+ +F P+ YDIQ FM +Y L+ K GI ESPTGTGKSLSLICG L
Sbjct: 8 GEKDGAAEISRDFHHPYTPYDIQETFMNTVYEVLEGGKVGILESPTGTGKSLSLICGSLT 67
Query: 73 WYYDHKIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYD 132
W D+K E L +N++ +W+ +Q+ K R + L+ ++ +
Sbjct: 68 WLRDYKRNTFE------GGLNWGQNDSNEPEWVIEQTKARKRR-------EMLRGREEME 114
Query: 133 ELIENIR-KQNEKRKKSLRNDQEVK 156
+ IR K+ ++ K L+ DQE K
Sbjct: 115 TRLAKIRAKEKAQKTKYLKGDQEFK 139
>gi|19115889|ref|NP_594977.1| ATP-dependent DNA helicase Chl1 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74581973|sp|O14147.1|CHL1_SCHPO RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|2408082|emb|CAB16287.1| ATP-dependent DNA helicase Chl1 (predicted) [Schizosaccharomyces
pombe]
Length = 844
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 79/133 (59%), Gaps = 15/133 (11%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGL 82
+ F P+ YDIQ FM++LY ++ + K GIFESPTGTGKSLSLIC L W +H V L
Sbjct: 11 TNFHHPYTPYDIQLEFMRSLYSSISDGKIGIFESPTGTGKSLSLICASLTWLDEHGGVLL 70
Query: 83 EKIEAKIKDLEISKNETVSE--DWIEQQSFELKMRNQIDALKDALK-SQKTYDELIENIR 139
E E K D +K+ T S+ DW+ +Q +++ KD +K + ++ +E IR
Sbjct: 71 EDNE-KSND---NKSNTSSKIPDWVLEQDLKIQ--------KDLVKETHARLEQRLEEIR 118
Query: 140 KQNEKRKKSLRND 152
K+N+ RK + N+
Sbjct: 119 KRNQSRKNQMSNN 131
>gi|332839861|ref|XP_003313865.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 1 [Pan
troglodytes]
gi|410258634|gb|JAA17284.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410301530|gb|JAA29365.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 62/183 (33%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
IE L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLIETGTGSLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKA 132
Query: 124 ALKSQKTYDELIENI--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERD 181
+K +E ++ + R Q + K LR ++E + L M E + +R E+
Sbjct: 133 EQARRKQREERLQQLQHRVQLKYAAKRLRQEEEETENLLRLSREMLETGPEAERLEQLES 192
Query: 182 GLE 184
G E
Sbjct: 193 GEE 195
>gi|194383052|dbj|BAG59082.1| unnamed protein product [Homo sapiens]
Length = 297
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|410348520|gb|JAA40864.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410348522|gb|JAA40865.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410348524|gb|JAA40866.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 86.7 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 62/183 (33%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
IE L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLIETGTGSLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKA 132
Query: 124 ALKSQKTYDELIENI--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERD 181
+K +E ++ + R Q + K LR ++E + L M E + +R E+
Sbjct: 133 EQARRKQREERLQQLQHRVQLKYAAKRLRQEEEETENLLRLSREMLETGPEAERLEQLES 192
Query: 182 GLE 184
G E
Sbjct: 193 GEE 195
>gi|410212712|gb|JAA03575.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 86.7 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 62/183 (33%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
IE L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLIETGTGSLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKA 132
Query: 124 ALKSQKTYDELIENI--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERD 181
+K +E ++ + R Q + K LR ++E + L M E + +R E+
Sbjct: 133 EQARRKQREERLQQLQHRVQLKYAAKRLRQEEEETENLLRLSREMLETGPEAERLEQLES 192
Query: 182 GLE 184
G E
Sbjct: 193 GEE 195
>gi|307186827|gb|EFN72247.1| Probable ATP-dependent RNA helicase DDX12 [Camponotus floridanus]
Length = 861
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 67/110 (60%), Gaps = 12/110 (10%)
Query: 31 AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK-------IVGLE 83
AY IQ FMK LY L+N K G+FESPTGTGKSLSLICG LKW DH+ I +
Sbjct: 13 AYQIQKQFMKELYNCLENGKLGLFESPTGTGKSLSLICGALKWLIDHEKWKKQELISIIT 72
Query: 84 KIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDE 133
+I+ KIK+ E S S+DW Q+ ++++ Q + L+ L + Y++
Sbjct: 73 EIDNKIKNYEKS-----SDDWFTVQTEQIELNKQREPLQAKLNALLEYED 117
>gi|119608983|gb|EAW88577.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like
helicase homolog, S. cerevisiae), isoform CRA_b [Homo
sapiens]
Length = 288
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|195564575|ref|XP_002105891.1| GD16432 [Drosophila simulans]
gi|194203255|gb|EDX16831.1| GD16432 [Drosophila simulans]
Length = 379
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 1 MASKTPNEDKEFNEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
MA TPN QR EF FP+ Y+IQ M+ L+ L+ + GIFESPTGT
Sbjct: 1 MAQYTPN-------QRLATPAAQEFGFPYSPYEIQEQLMQELFEVLERGQVGIFESPTGT 53
Query: 61 GKSLSLICGILKWYYDHKIVGLEKIEAKIKDL-----EISKNETVSEDWIEQQSFELKMR 115
GKSL+L CG L W H+ + ++ A+I+ + E+ + S DW+E Q R
Sbjct: 54 GKSLTLTCGALTWLARHEELVRTEMLARIRGVEQELTELEEESEKSSDWLESQGKSRAQR 113
Query: 116 NQIDALKDALKSQKTYDELIENIRKQNEKRKK 147
++ L+ ++ +E IRK +K K+
Sbjct: 114 AELLRLQHLRALLDKQEQQLEQIRKGAKKHKR 145
>gi|441670170|ref|XP_004092177.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 [Nomascus
leucogenys]
Length = 970
Score = 86.3 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 85/183 (46%), Gaps = 23/183 (12%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
+E L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKA 132
Query: 124 ALKSQKTYDELIENI--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERD 181
+K +E ++ + R Q + K LR ++E + L M E +R E+
Sbjct: 133 EQARRKQREERLQQLQHRVQLKYAAKRLRQEEEEMENLLRLSREMLETGLGAERPEQLES 192
Query: 182 GLE 184
G E
Sbjct: 193 GEE 195
>gi|291224421|ref|XP_002732204.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like
[Saccoglossus kowalevskii]
Length = 853
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 83/146 (56%), Gaps = 19/146 (13%)
Query: 19 AEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
++VP FPFPF YDIQ +FM LY TLD SK GIFESPTGTGKSLSLICG LKW D +
Sbjct: 5 SDVPESFPFPFPPYDIQKDFMSQLYQTLDQSKIGIFESPTGTGKSLSLICGALKWLNDFE 64
Query: 79 IVGLEKIEAKIKDLEISKNETVSE-----------DWIEQQSFELKMRNQIDALKDALKS 127
EK +++DL K +T S+ DW+ + + +Q LKD +
Sbjct: 65 ----EKQRQELEDLLQGKTKTTSDTRTSKQDDDEPDWLAEFDEKKAQMDQAAELKDKIDK 120
Query: 128 QKTYDELIENI----RKQNEKRKKSL 149
+ Y+E ++ + +K KRK S+
Sbjct: 121 RLKYEEKLKQLKDTRKKYQSKRKHSV 146
>gi|1666895|gb|AAB18750.1| CHL1 protein [Homo sapiens]
gi|119571190|gb|EAW50805.1| hCG1993153, isoform CRA_a [Homo sapiens]
Length = 288
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|383410919|gb|AFH28673.1| putative ATP-dependent RNA helicase DDX11 isoform 1 [Macaca
mulatta]
Length = 906
Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 85/183 (46%), Gaps = 23/183 (12%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
+E L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLLETGTGPLHDEKDESLCLSSSCKGAAATPRPAGEPAWVTQFVQKKEERDLVDRLKA 132
Query: 124 ALKSQKTYDELIENI--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERD 181
+K +E ++ + R Q + K LR ++E + L M E +R E+
Sbjct: 133 EQARRKQREERLQQLQHRAQFKYAAKRLRQEEEETENLLRLSREMLETGPGAERPEQLES 192
Query: 182 GLE 184
G E
Sbjct: 193 GEE 195
>gi|345492904|ref|XP_001602139.2| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Nasonia vitripennis]
Length = 869
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 88/142 (61%), Gaps = 18/142 (12%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH-- 77
E PS+FPFPF Y IQ++FMKNLY L+N GIFESPTGTGK+LS+ICG LKW D+
Sbjct: 2 ETPSDFPFPFPPYSIQADFMKNLYMCLENGNLGIFESPTGTGKTLSIICGALKWLIDNEA 61
Query: 78 --KIVGLEK---IEAKIKDLEISKNETVSEDWIEQQSFELK-------MRNQIDALKDAL 125
K LEK ++AKIK++E +KN DW Q+ +++ ++ ++DAL
Sbjct: 62 RQKSRLLEKQAELDAKIKEIE-AKN---VNDWFSVQTEQIELNQDKQFLQKKLDALAKQE 117
Query: 126 KSQKTYDELIENIRKQNEKRKK 147
+ + Y E ++ +Q +K K+
Sbjct: 118 EKKIKYKERVKQYNEQCKKNKQ 139
>gi|119571193|gb|EAW50808.1| hCG1993153, isoform CRA_d [Homo sapiens]
Length = 457
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|282848158|ref|NP_001164296.1| DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Xenopus (Silurana)
tropicalis]
gi|197246717|gb|AAI68601.1| Unknown (protein for MGC:185780) [Xenopus (Silurana) tropicalis]
Length = 895
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 78/141 (55%), Gaps = 23/141 (16%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH------- 77
FPFP++ Y IQ FM+ LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPYEPYPIQEQFMEKLYQALEAGKVGIFESPTGTGKSLSLICGALTWLQDFETKKRQE 72
Query: 78 --KIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELI 135
+ + + E K KD S E DWI Q ++M+ ++D +K+ +K ++
Sbjct: 73 EAQALSVADTELKEKDTSASSTEP---DWIAQ---FVQMKEEMD-IKNKIKEEQLR---- 121
Query: 136 ENIRKQNEKRKKSLRNDQEVK 156
RK+ E+ K ++++ ++K
Sbjct: 122 ---RKKREEHLKQMKHNVQLK 139
>gi|355563978|gb|EHH20478.1| hypothetical protein EGK_03343 [Macaca mulatta]
Length = 906
Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 85/183 (46%), Gaps = 23/183 (12%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKHEE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
+E L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLLETGTGPLHDEKDESLCLSSSCKGAAATPRPAGEPAWVTQFVQKKEERDLVDRLKA 132
Query: 124 ALKSQKTYDELIENI--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERD 181
+K +E ++ + R Q + K LR ++E + L M E +R E+
Sbjct: 133 EQARRKQREERLQQLQHRAQFKYAAKRLRQEEEETENLLRLSREMLETGPGAERPEQLES 192
Query: 182 GLE 184
G E
Sbjct: 193 GEE 195
>gi|119571192|gb|EAW50807.1| hCG1993153, isoform CRA_c [Homo sapiens]
gi|119571195|gb|EAW50810.1| hCG1993153, isoform CRA_c [Homo sapiens]
Length = 314
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|332839863|ref|XP_003313866.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 2 [Pan
troglodytes]
Length = 856
Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 62/183 (33%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
IE L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLIETGTGSLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKA 132
Query: 124 ALKSQKTYDELIENI--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERD 181
+K +E ++ + R Q + K LR ++E + L M E + +R E+
Sbjct: 133 EQARRKQREERLQQLQHRVQLKYAAKRLRQEEEETENLLRLSREMLETGPEAERLEQLES 192
Query: 182 GLE 184
G E
Sbjct: 193 GEE 195
>gi|297261772|ref|XP_001114510.2| PREDICTED: putative ATP-dependent RNA helicase DDX11-like
protein-like isoform 4 [Macaca mulatta]
Length = 910
Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 85/183 (46%), Gaps = 23/183 (12%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 17 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 76
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
+E L K+E++ W+ Q + + R+ +D LK
Sbjct: 77 EARLLETGTGPLHDEKDESLCLSSSCKGAAATPRPAGEPAWVTQFVQKKEERDLVDRLKV 136
Query: 124 ALKSQKTYDELIENI--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERD 181
+K +E ++ + R Q + K LR ++E + L M E +R E+
Sbjct: 137 EQARRKQREERLQQLQHRAQFKYAAKRLRQEEEETENLLRLSREMLETGPGAERPEQLES 196
Query: 182 GLE 184
G E
Sbjct: 197 GEE 199
>gi|194387252|dbj|BAG59990.1| unnamed protein product [Homo sapiens]
Length = 304
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|355785871|gb|EHH66054.1| hypothetical protein EGM_02957 [Macaca fascicularis]
Length = 906
Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 85/183 (46%), Gaps = 23/183 (12%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
+E L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLLETGTGPLHDEKDESLCLSSSCKGAAATPRPAGEPAWVTQFVQKKEERDLVDRLKA 132
Query: 124 ALKSQKTYDELIENI--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERD 181
+K +E ++ + R Q + K LR ++E + L M E +R E+
Sbjct: 133 EQARRKQREERLQQLQHRVQFKYAAKRLRQEEEETENLLRLSREMLETGPGAERPEQLES 192
Query: 182 GLE 184
G E
Sbjct: 193 GEE 195
>gi|406865719|gb|EKD18760.1| putative ATP-dependent RNA helicase chl1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 894
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 78/148 (52%), Gaps = 20/148 (13%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
+F PF Y IQ FM+ +Y L+N K GI ESPTGTGKSLSLICG L W DHK G E
Sbjct: 17 DFHHPFTPYTIQETFMETVYQVLENGKVGILESPTGTGKSLSLICGALTWLRDHK--GRE 74
Query: 84 KIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIR-KQN 142
E L +N++ +WI +Q+ K R + L+ ++ + + IR K+
Sbjct: 75 FQEG----LNWGQNDSDEPEWIIEQARARKRR-------EMLRHREDMEARLAKIRAKEK 123
Query: 143 EKRKKSLRNDQEVKVHALTYRNRMDEKN 170
+R K ++ DQ K R ++D N
Sbjct: 124 AQRDKYMKGDQGFK------RRKIDMAN 145
>gi|119608984|gb|EAW88578.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like
helicase homolog, S. cerevisiae), isoform CRA_c [Homo
sapiens]
Length = 295
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|194381748|dbj|BAG64243.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|110645341|gb|AAI18718.1| Unknown (protein for IMAGE:7692570) [Xenopus (Silurana) tropicalis]
Length = 115
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 58/104 (55%), Gaps = 15/104 (14%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH------- 77
FPFP++ Y IQ FM+ LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPYEPYPIQEQFMEKLYQALEAGKVGIFESPTGTGKSLSLICGALTWLQDFETKKRQE 72
Query: 78 --KIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQID 119
+ + + E K KD S E DWI Q ++M+ ++D
Sbjct: 73 EAQALSVADTELKEKDTSASSTEP---DWIAQF---VQMKEEMD 110
>gi|196005263|ref|XP_002112498.1| hypothetical protein TRIADDRAFT_25417 [Trichoplax adhaerens]
gi|190584539|gb|EDV24608.1| hypothetical protein TRIADDRAFT_25417 [Trichoplax adhaerens]
Length = 899
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 10/136 (7%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY--YDHKIVG 81
+F FPF YDIQ FM+ LY L + K GIFESPTGTGKSLSLICG + W ++ I G
Sbjct: 16 DFDFPFQPYDIQVQFMRTLYTVLQDRKIGIFESPTGTGKSLSLICGAITWLNDFNRNIEG 75
Query: 82 LEKIEAKIKDLEISKNETVSEDWI---EQQSFELKMRNQIDALKDALKSQKTYDELIENI 138
+IE++ L+I + + WI +QQ + + + ++K L +++ ++NI
Sbjct: 76 --RIESRYLKLDIQLSVILELSWITEYDQQKADRERLQIVQSMKQKLLDRQSR---LKNI 130
Query: 139 RKQNEKRKKSLRNDQE 154
+K K + ND +
Sbjct: 131 KKNFSTVKTKVWNDAD 146
>gi|119571196|gb|EAW50811.1| hCG1993153, isoform CRA_f [Homo sapiens]
Length = 269
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|452002470|gb|EMD94928.1| hypothetical protein COCHEDRAFT_1168302 [Cochliobolus
heterostrophus C5]
Length = 1449
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 35/180 (19%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
+F P+ YDIQ+ FM +Y L+N + GIFESPTGTGKSLSLICG L W DHK E
Sbjct: 9 DFHHPYTPYDIQNEFMGAVYECLENGQVGIFESPTGTGKSLSLICGSLTWLRDHKRKTFE 68
Query: 84 KIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNE 143
E D S+ + WI + + K R Q +AL+ ++ +E I I+ + +
Sbjct: 69 --EGFAADAANSEEPS----WIVEHA--QKQRKQ-----EALRRKQELNERIAKIKAKEK 115
Query: 144 KRKKSLRNDQEVKVHALTYRNR----------------MDEKNSKEKRKEEERDGLENET 187
+ K+ N + +Y+ R +D+ S ++ ++ R G NE+
Sbjct: 116 RAKERYENGES------SYKRRKVVPGETNDDDEAQFVLDDYESDQESQKRARGGTFNES 169
>gi|395538820|ref|XP_003771372.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Sarcophilus harrisii]
Length = 901
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 93/174 (53%), Gaps = 16/174 (9%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
FPFP+ Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +
Sbjct: 11 HFPFPYTPYSIQKDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKQQ 70
Query: 84 KIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNE 143
+ EA + D I+ D++E+ + + DA KS D +++ ++K+ E
Sbjct: 71 E-EAHLLDTGIA-----PPDFLEEGPPHMSTNQEAS---DAPKSTGEPDWIVQFVQKKEE 121
Query: 144 K-RKKSLRNDQ------EVKVHALTYRNRMDEKNSKEKRKEEERDGLENETQEL 190
K R LR++Q E ++ L + + + +++EEE + L + ++E+
Sbjct: 122 KDRIDRLRDEQIKKKKREERLQQLRHNVHLKYAAKRVRQEEEEMERLLHLSKEM 175
>gi|194912339|ref|XP_001982483.1| GG12711 [Drosophila erecta]
gi|190648159|gb|EDV45452.1| GG12711 [Drosophila erecta]
Length = 859
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 1 MASKTPNEDKEFNEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
MA TP+ QR EF FP+ Y IQ M+ L+ L+N + GIFESPTGT
Sbjct: 1 MAQYTPD-------QRLDTPTAQEFGFPYPPYAIQEQLMQELFRVLENGQVGIFESPTGT 53
Query: 61 GKSLSLICGILKWYYDHKIVGLEKIEAKIKDLE-----ISKNETVSEDWIEQQSFELKMR 115
GKSL+L CG L W H+ + ++ A+I+ +E + + S DW+E Q R
Sbjct: 54 GKSLTLTCGALTWLARHEELVHTEMLARIRGVEQELAKLKEESEQSSDWLESQGKSRARR 113
Query: 116 NQIDALKDALKSQKTYDELIENIRKQNEKRKKSLR 150
++ L+ + ++ + IRK+ + +K R
Sbjct: 114 EELHRLQHLQELVDKQEQQLVQIRKRAKMHRKQGR 148
>gi|205716435|sp|A8MPP1.1|D11L8_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DDX11-like
protein 8; AltName: Full=DEAD/H box protein 11-like 8
Length = 907
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
+E L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKV 132
Query: 124 ALKSQKTYDELIENI--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERD 181
+K +E ++ + R Q + K LR ++E + L M E + +R E+
Sbjct: 133 EQARRKQREERLQQLQHRVQLKYAAKRLRQEEEETENLLRLSREMLETGPEAERLEQLES 192
Query: 182 GLE 184
G E
Sbjct: 193 GEE 195
>gi|345317478|ref|XP_001517598.2| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
[Ornithorhynchus anatinus]
Length = 899
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 63/177 (35%), Positives = 90/177 (50%), Gaps = 17/177 (9%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYPIQESFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFET---KK 69
Query: 85 IEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNEK 144
+ + + LE N +D +Q S + D + ++ +K EL+E ++ + +
Sbjct: 70 KQEEARLLEAGNNP--PDDHGDQPSGPGTSAGEPDWITQFVQ-KKEERELVERLKDEQAR 126
Query: 145 RKK------SLRNDQEVKVHALTYRNRMDEKN-----SKEKRKEEERDGLENETQEL 190
RKK +R++ ++K A R DE SKE E + LE ++L
Sbjct: 127 RKKREERFLQIRHNAQLKYAAKRVRQEDDETERLLRLSKEMVAAEGGEQLEPGEEDL 183
>gi|332232617|ref|XP_003265500.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 1
[Nomascus leucogenys]
Length = 906
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 85/183 (46%), Gaps = 23/183 (12%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
+E L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKA 132
Query: 124 ALKSQKTYDELIENI--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERD 181
+K +E ++ + R Q + K LR ++E + L M E +R E+
Sbjct: 133 EQARRKQREERLQQLQHRVQLKYAAKRLRQEEEEMENLLRLSREMLETGLGAERPEQLES 192
Query: 182 GLE 184
G E
Sbjct: 193 GEE 195
>gi|324515332|gb|ADY46168.1| ATP-dependent RNA helicase chl1, partial [Ascaris suum]
Length = 454
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
EF FPF YDIQ + M+ + ++ K GIFESPTGTGKSLS IC L W + E
Sbjct: 3 EFSFPFPPYDIQVSLMREIRKCVEGGKVGIFESPTGTGKSLSTICATLSWLECFEREQRE 62
Query: 84 KIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNE 143
++E ++KD E N+ +DW+ + + + Q ++ L++ + DE I+ R +
Sbjct: 63 QLEKQLKDAEEIGNDD-GDDWVAAYKKKFEAKRQASGAEEKLQNLRLIDERIKQARSDKK 121
Query: 144 KRKKSLRND 152
+RK+ D
Sbjct: 122 ERKRRCAAD 130
>gi|167527059|ref|XP_001747862.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773611|gb|EDQ87249.1| predicted protein [Monosiga brevicollis MX1]
Length = 812
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/153 (34%), Positives = 87/153 (56%), Gaps = 20/153 (13%)
Query: 5 TPNEDKEFNEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSL 64
+PNE + +PLA P +F FPF+ Y IQ +FM LY T++ GIFESPTGTGKSL
Sbjct: 12 SPNE-----QPKPLA-TPVDFAFPFEPYSIQRDFMHRLYETIEQGGLGIFESPTGTGKSL 65
Query: 65 SLICGILKWYYDHKIVGLEKIEAKIK------DLEISKNETVS--EDWIEQQSFELKMRN 116
SL+CG L+W DH+ + ++ +++ D + T S WI Q+ +
Sbjct: 66 SLLCGALRWLRDHEQRMHDHLQEQLQSPDRRPDTAKAGPSTNSGQPSWITTQA---QKSR 122
Query: 117 QIDALKDALKSQ---KTYDELIENIRKQNEKRK 146
+++AL+D ++ Q +T +E +R ++ +++
Sbjct: 123 RLEALQDEIERQERLQTKQSRLERLRAKSAQQR 155
>gi|169625336|ref|XP_001806072.1| hypothetical protein SNOG_15940 [Phaeosphaeria nodorum SN15]
gi|160705637|gb|EAT76778.2| hypothetical protein SNOG_15940 [Phaeosphaeria nodorum SN15]
Length = 1396
Score = 84.0 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 63/177 (35%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
F P++ YDIQ++FM +Y LD K GIFESPTGTGKSLSLICG L W DHK E
Sbjct: 10 FHHPYEPYDIQNDFMNAVYDCLDAGKVGIFESPTGTGKSLSLICGSLTWLRDHKRRTFED 69
Query: 85 ---IEAKIKD-----LEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIE 136
+ A D LE ++ + E +Q ++ ++I +K K K E E
Sbjct: 70 GFAVYAAASDEPAWILEHAQKQRKQEALRRRQ----ELNDRIAKIKAKEKRAKERYESGE 125
Query: 137 NIRKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEE-ERDGLENETQELDE 192
R + +K ND++ + + DE++ K R GL ETQ L E
Sbjct: 126 P-RYKRQKMAAGEANDKDDEAQFVLDDYETDEEHDKAARSGGFSESGLSAETQALME 181
>gi|195469691|ref|XP_002099770.1| GE16539 [Drosophila yakuba]
gi|194187294|gb|EDX00878.1| GE16539 [Drosophila yakuba]
Length = 859
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 1 MASKTPNEDKEFNEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
MA TP+ QR EF FP+ Y IQ M+ L+ L+ + GIFESPTGT
Sbjct: 1 MAQYTPS-------QRLTTPSAQEFGFPYPPYTIQEQLMQELFQVLERGQVGIFESPTGT 53
Query: 61 GKSLSLICGILKWYYDHKIVGLEKIEAKIKDL--EISKNETVSE---DWIEQQSFELKMR 115
GKSL+L CG L W H+ + ++ A+I+ + E++K + SE DW+E Q R
Sbjct: 54 GKSLTLTCGALTWLARHEELVRTEMLARIRRVEQELAKLKDESEHSSDWLESQGKSRAQR 113
Query: 116 NQIDALKDALKSQKTYDELIENIRKQNEKRKKSLR 150
++ L+ + ++ + IRK K +K R
Sbjct: 114 EELHRLQHLQELVDKQEQQLAQIRKGATKHRKQGR 148
>gi|452981101|gb|EME80861.1| hypothetical protein MYCFIDRAFT_20311, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 788
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 12/111 (10%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVG 81
P +F PF YDIQ FM+ +Y +++ + GIFESPTGTGKSLSLICG L W +HK
Sbjct: 1 PKDFHHPFQPYDIQQQFMEAVYDCIEHKQVGIFESPTGTGKSLSLICGALTWLREHK--- 57
Query: 82 LEKIEAKIKDLEISKNETVSEDWIEQQSFELK------MRNQIDALKDALK 126
+ + + +E+ +E DW+ Q + E + MR ++A A++
Sbjct: 58 RKTFDEALATVEVDDDE---PDWMTQHAREARSREIRQMRGDLEARLSAVR 105
>gi|449482368|ref|XP_002193292.2| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Taeniopygia guttata]
Length = 913
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
+P FPFP+ Y IQ FM+ LY L+ + GIFESPTGTGKSLSLICG L W D
Sbjct: 1 MPGRFPFPYTPYRIQEQFMEALYGALEAGRVGIFESPTGTGKSLSLICGALSWLRD 56
>gi|403159247|ref|XP_003319882.2| hypothetical protein PGTG_00794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168014|gb|EFP75463.2| hypothetical protein PGTG_00794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 826
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 78/133 (58%), Gaps = 16/133 (12%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY-YDHKIV 80
P +F FPF+ Y+IQ FM+ L+ +++ K GIFESPTGTGKSLSLIC L W D +
Sbjct: 16 PEQFSFPFEPYEIQRRFMRVLFEVIEHQKVGIFESPTGTGKSLSLICAALTWLELDRRRA 75
Query: 81 ---GLEKIEAKIKDLEISKNETVSE-DWIEQQSFELKMRNQI---DALKDALKSQKTYDE 133
LE++ AK+K E+ E DWI +Q E K R I DAL++ L++ + +
Sbjct: 76 TEGTLEQLFAKLKA------ESPQEPDWILEQHVERKRRELIAEEDALEERLQAIRNQEA 129
Query: 134 LIENIRKQNEKRK 146
++ RKQ R+
Sbjct: 130 ELK--RKQKSSRQ 140
>gi|332232619|ref|XP_003265501.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 2
[Nomascus leucogenys]
Length = 856
Score = 83.6 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 85/183 (46%), Gaps = 23/183 (12%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
+E L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKA 132
Query: 124 ALKSQKTYDELIENI--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERD 181
+K +E ++ + R Q + K LR ++E + L M E +R E+
Sbjct: 133 EQARRKQREERLQQLQHRVQLKYAAKRLRQEEEEMENLLRLSREMLETGLGAERPEQLES 192
Query: 182 GLE 184
G E
Sbjct: 193 GEE 195
>gi|308497656|ref|XP_003111015.1| hypothetical protein CRE_04799 [Caenorhabditis remanei]
gi|308242895|gb|EFO86847.1| hypothetical protein CRE_04799 [Caenorhabditis remanei]
Length = 850
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 77/132 (58%), Gaps = 18/132 (13%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
EF FPF YDIQ+ M+ + +++ K GIFESPTGTGKSLS++C L W +
Sbjct: 3 EFSFPFQPYDIQNRLMREIRSCIEHGKVGIFESPTGTGKSLSVLCATLTWLENEDKQIEA 62
Query: 84 KIEAKIK--DLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQ 141
++E+K+K LE++K+E +E+W ALK+ +KS+K + ++E I
Sbjct: 63 ELESKLKTVQLELNKSEKTTENWEA-------------ALKNKIKSEKEKEGIVEKIE-- 107
Query: 142 NEKRKKSLRNDQ 153
E+++ + R DQ
Sbjct: 108 -ERKRLTKRIDQ 118
>gi|302654465|ref|XP_003019039.1| hypothetical protein TRV_06940 [Trichophyton verrucosum HKI 0517]
gi|291182731|gb|EFE38394.1| hypothetical protein TRV_06940 [Trichophyton verrucosum HKI 0517]
Length = 859
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 70/127 (55%), Gaps = 16/127 (12%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK-IVGL 82
+F P+ YDIQ+ FM+ LY +++ GIFESPTGTGKSLSLICG L W DHK V L
Sbjct: 4 DFRHPYRPYDIQAQFMEALYGCIEDGGVGIFESPTGTGKSLSLICGSLAWLRDHKRSVFL 63
Query: 83 EKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQN 142
EK + D E DW+ Q + + R Q + L +K +E + +R+
Sbjct: 64 EKADDDGDDGE--------PDWMVQHA--RRERTQ-----EMLARRKELEERLARVREAE 108
Query: 143 EKRKKSL 149
E+ +K L
Sbjct: 109 ERHRKKL 115
>gi|18543219|ref|NP_569898.1| CG11403 [Drosophila melanogaster]
gi|6018910|emb|CAB58099.1| EG:33C11.2 [Drosophila melanogaster]
gi|7290134|gb|AAF45598.1| CG11403 [Drosophila melanogaster]
gi|16197995|gb|AAL13769.1| LD24267p [Drosophila melanogaster]
gi|220945784|gb|ACL85435.1| CG11403-PA [synthetic construct]
gi|220955538|gb|ACL90312.1| CG11403-PA [synthetic construct]
Length = 861
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 1 MASKTPNEDKEFNEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
M+ TPN QR EF FP+ Y+IQ M+ L+ L+ + GIFESPTGT
Sbjct: 1 MSQYTPN-------QRLDTPGAQEFGFPYSPYEIQEQLMQELFQVLERGQVGIFESPTGT 53
Query: 61 GKSLSLICGILKWYYDHKIVGLEKIEAKIKDLE-----ISKNETVSEDWIEQQSFELKMR 115
GKSL+L CG L W H+ + ++ A+I+ +E + + S +W+E Q R
Sbjct: 54 GKSLTLTCGALTWLARHEELVRTEMLARIRGVEQELAKLKEESEQSSNWLESQGKSRAQR 113
Query: 116 NQIDALKDALKSQKTYDELIENIRKQNEKRKKSLR 150
++ L+ ++ ++ IRK +K K+ R
Sbjct: 114 AELLRLQHLQALLDKQEQQLDQIRKGAKKHKRQGR 148
>gi|195347574|ref|XP_002040327.1| GM18989 [Drosophila sechellia]
gi|194121755|gb|EDW43798.1| GM18989 [Drosophila sechellia]
Length = 868
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 1 MASKTPNEDKEFNEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
+A TPN QR EF FP+ Y+IQ M+ L+ L+ + GIFESPTGT
Sbjct: 8 LAQYTPN-------QRLDTPAAQEFGFPYSPYEIQEQLMQELFQVLERGQVGIFESPTGT 60
Query: 61 GKSLSLICGILKWYYDHKIVGLEKIEAKIKDL-----EISKNETVSEDWIEQQSFELKMR 115
GKSL+L CG L W H+ + ++ A+I+ + E+ + S DW+E Q R
Sbjct: 61 GKSLTLTCGALTWLARHEELVRTEMLARIRGVEQELAELEEESEKSSDWLESQGKSRAQR 120
Query: 116 NQIDALKDALKSQKTYDELIENIRKQNEKRKK 147
++ L+ ++ +E IRK +K K+
Sbjct: 121 AELLRLQHLQALLDKQEQQLEQIRKGAKKHKR 152
>gi|195132879|ref|XP_002010867.1| GI21782 [Drosophila mojavensis]
gi|193907655|gb|EDW06522.1| GI21782 [Drosophila mojavensis]
Length = 852
Score = 82.4 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 97/176 (55%), Gaps = 15/176 (8%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK----- 78
EF FP+ Y+IQ M+ L+ L++ + GIFESPTGTGKSL+L CG L W H+
Sbjct: 15 EFGFPYTPYEIQEQLMQQLFQVLEHKQIGIFESPTGTGKSLTLTCGALTWLRQHEQLVRT 74
Query: 79 --IVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMR---NQIDALKDALKSQKTYDE 133
+ +++++A++K L+I + +EDWI QS R Q+ L++ L+ ++ E
Sbjct: 75 ELLQRIDQVQAQLKQLQIESAQ--AEDWITAQSKTRTQRLELEQLHRLRELLQQKEQELE 132
Query: 134 LIENIRKQNEKRKKSLRNDQEVK---VHALTYRNRMDEKNSKEKRKEEERDGLENE 186
I+ ++Q ++ ++ R ++K V N +E ++ E EE+ L++E
Sbjct: 133 QIKQRKRQQQEHQRPARRASDLKETPVEEEEALNSDEELDNVESVLEEQPAELQSE 188
>gi|426227064|ref|XP_004007648.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase
DDX11-like protein 8-like [Ovis aries]
Length = 884
Score = 82.4 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 53/151 (35%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + ++
Sbjct: 13 FPFPFTPYAIQKDFMAALYQVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKRQE 72
Query: 85 IEAKIKDLEISKNE---------------------TVSEDWIEQQSFELKMRNQIDALKD 123
E ++ + ++ T DWI Q + + R+ +D LK+
Sbjct: 73 EERLLEAGAPTSSDGLAPALGPPPSCQGSPGTPEATGEPDWITQFVQKKEERDLVDRLKE 132
Query: 124 ALKSQKTYDELIENIRKQNEKRKKSLRNDQE 154
+K +E ++ IR + R + R QE
Sbjct: 133 EQVRRKKREERLQQIRHNAKLRFAAKRMRQE 163
>gi|303310525|ref|XP_003065274.1| DNA repair helicase family protein [Coccidioides posadasii C735
delta SOWgp]
gi|240104936|gb|EER23129.1| DNA repair helicase family protein [Coccidioides posadasii C735
delta SOWgp]
Length = 864
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK-IVGLE 83
F P+ YDIQ FM++LY ++ K GIFESPTGTGKSLSLICG L W DHK V LE
Sbjct: 8 FYHPYSPYDIQVQFMRSLYTCIEECKVGIFESPTGTGKSLSLICGSLTWLRDHKRSVFLE 67
Query: 84 KIE 86
IE
Sbjct: 68 DIE 70
>gi|119195411|ref|XP_001248309.1| hypothetical protein CIMG_02080 [Coccidioides immitis RS]
gi|121932141|sp|Q1E5T3.1|CHL1_COCIM RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
Length = 861
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK-IVGLE 83
F P+ YDIQ FM++LY ++ K GIFESPTGTGKSLSLICG L W DHK V LE
Sbjct: 8 FYHPYSPYDIQVQFMRSLYTCIEECKVGIFESPTGTGKSLSLICGSLTWLRDHKRSVFLE 67
Query: 84 KIE 86
IE
Sbjct: 68 DIE 70
>gi|327272138|ref|XP_003220843.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Anolis carolinensis]
Length = 914
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 36/52 (69%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
FPFP+ Y IQ FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPYAPYPIQEEFMAKLYQVLETGKIGIFESPTGTGKSLSLICGALTWLRD 64
>gi|330930952|ref|XP_003303208.1| hypothetical protein PTT_15338 [Pyrenophora teres f. teres 0-1]
gi|311320914|gb|EFQ88691.1| hypothetical protein PTT_15338 [Pyrenophora teres f. teres 0-1]
Length = 865
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 69/133 (51%), Gaps = 14/133 (10%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
+F P+ YDIQ+ FM +Y L++ K GIFESPTGTGKSLSLICG L W DHK E
Sbjct: 9 DFHHPYTPYDIQNEFMGAVYKCLEDRKVGIFESPTGTGKSLSLICGSLTWLRDHKRRMFE 68
Query: 84 KIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNE 143
+ I N WI + + K R Q +AL+ ++ ++ I I K E
Sbjct: 69 ------EGFAIDANNCDEPSWIVEHA--QKQRKQ-----EALRRKQDLNDRIAKI-KAKE 114
Query: 144 KRKKSLRNDQEVK 156
KR K D ++
Sbjct: 115 KRAKECYQDSALR 127
>gi|363728123|ref|XP_416375.3| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Gallus
gallus]
Length = 941
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 37/54 (68%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
+ FPFP+ Y IQ FM LY L+ + GIFESPTGTGKSLSLICG L W D
Sbjct: 48 ASFPFPYTPYRIQEQFMAALYAALEAGRIGIFESPTGTGKSLSLICGALSWLQD 101
>gi|410963605|ref|XP_003988355.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Felis catus]
Length = 907
Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 67/136 (49%), Gaps = 21/136 (15%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK------ 78
FPFPF Y IQ +FM LY LD K GIFESPTGTGKSLSLICG L W D +
Sbjct: 13 FPFPFTPYSIQKDFMAELYRVLDAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKHQE 72
Query: 79 --------IVGLEKIEAKIKDLEISKNETVSE-------DWIEQQSFELKMRNQIDALKD 123
V L + + L S ET DW+ Q + + R+ +D LK+
Sbjct: 73 EARLLETGTVPLSDGKDQPPFLSSSCKETPDTLRPAGEPDWVTQFVQKKEERDLVDRLKE 132
Query: 124 ALKSQKTYDELIENIR 139
+K +E ++ IR
Sbjct: 133 EQVRRKKREERLQQIR 148
>gi|242814468|ref|XP_002486375.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
gi|218714714|gb|EED14137.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
Length = 860
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
+F P+ YDIQ FM LY ++ K GIFESPTGTGKSLSLICG L W DHK +
Sbjct: 4 QFHHPYTPYDIQLEFMSALYDCIEAGKVGIFESPTGTGKSLSLICGALTWLRDHK---RK 60
Query: 84 KIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNE 143
+ I L +E DW+ E + + AL + + +E + IRK+ E
Sbjct: 61 EFLKSIDGLSADDDE---PDWM----LEYSKKERTQALT---QKWRELEERLARIRKEEE 110
Query: 144 KRKKSLRN 151
+RKK +N
Sbjct: 111 RRKKLAQN 118
>gi|194768579|ref|XP_001966389.1| GF22147 [Drosophila ananassae]
gi|190617153|gb|EDV32677.1| GF22147 [Drosophila ananassae]
Length = 875
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 77/135 (57%), Gaps = 13/135 (9%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
+F FP++ Y+IQ M+ L+ L+N + GIFESPTGTGKSL+L CG L W H+ + E
Sbjct: 17 QFGFPYEPYEIQKKLMQELFQILENGEVGIFESPTGTGKSLTLTCGALTWLARHEKLVKE 76
Query: 84 KIEAKIKDLE-----ISKNETVSEDW------IEQQSFELKMRNQIDALKDALKSQKTYD 132
+++ ++ +E + K+ ++DW +++Q E++ ++ L D ++
Sbjct: 77 ELQERVDMMEKLVKRLKKDGQEAKDWLDVQGKVQEQVLEMQTLRRLKELHD--NKEQQLA 134
Query: 133 ELIENIRKQNEKRKK 147
E+ + ++ N RKK
Sbjct: 135 EMKDRVKIHNRNRKK 149
>gi|395836775|ref|XP_003791325.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Otolemur garnettii]
Length = 880
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 65/199 (32%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + ++
Sbjct: 13 FPFPFTPYSIQKDFMAQLYQVLEAGKIGIFESPTGTGKSLSLICGSLSWLRDFEQKKRQE 72
Query: 85 IEAKIKDLEI----------------------SKNETVSEDWIEQQSFELKMRNQIDALK 122
EA++ + E + T DWI Q + + R+ + LK
Sbjct: 73 -EARLLETETGPAWDEKGPPPVILSSCGETAGTSKPTGEPDWITQFVQKKEERDMVARLK 131
Query: 123 DALKSQKTYDELIENIRKQNEKRK---KSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEE 179
+ ++ +E ++ I + N K K K LR ++E L M E + ++ E
Sbjct: 132 EEQIWRRKREERLQQI-QHNTKLKYTAKRLRQEEEDTESLLRLSREMLEAGTGAEQLEPL 190
Query: 180 RDGLEN----ETQELDESR 194
G E E + DE R
Sbjct: 191 ESGEEELVLAEYESDDEKR 209
>gi|340721189|ref|XP_003399007.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX11-like [Bombus terrestris]
Length = 857
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
Query: 32 YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIEAKIKD 91
Y IQ+ FMK LY L+NSK GIFESPTGTGKS+S+ICG LKW D++ + +++ + I +
Sbjct: 14 YPIQTQFMKELYKCLENSKLGIFESPTGTGKSMSIICGALKWLLDYEELQKDELTSAISE 73
Query: 92 L--EISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDE----LIENIRKQNEKR 145
L +I + +++W Q ++++ + AL+ L + Y++ L E + N K+
Sbjct: 74 LDEQIKQYINSTDNWFSVQIQQIELNRKRQALQTKLNNIVQYEQKKNSLKERTKSINSKK 133
Query: 146 KKS 148
K S
Sbjct: 134 KDS 136
>gi|431892148|gb|ELK02595.1| Putative ATP-dependent RNA helicase DDX11-like protein [Pteropus
alecto]
Length = 857
Score = 80.9 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 60/158 (37%), Positives = 81/158 (51%), Gaps = 36/158 (22%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + ++
Sbjct: 26 FPFPFTPYSIQKDFMAELYQVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEKKKRQE 85
Query: 85 IEAKIKDLEI---------------SKNET------VSE-DWIEQQSFELKMRNQIDALK 122
EA++ + E S ET V E DW+ Q + + R+ +D LK
Sbjct: 86 -EARVLETETVPLSDGKHQPSFLSSSGQETPDTLRPVGEPDWVTQFVQKKEERDLVDRLK 144
Query: 123 DALKSQKTYDELIENI-RKQNEKRKKSLRNDQEVKVHA 159
+ E I RK+ E+R + +R+D ++K A
Sbjct: 145 E------------EQIRRKKREERLQQIRHDTQLKYAA 170
>gi|348564904|ref|XP_003468244.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Cavia porcellus]
Length = 908
Score = 80.9 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
+FPFPF Y IQ +FM LY+ L+ K GIFESPTGTGKSLSLICG L W D + +
Sbjct: 12 DFPFPFPPYSIQKDFMAKLYHVLEAGKIGIFESPTGTGKSLSLICGALTWLRDFE---QK 68
Query: 84 KIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNE 143
K + + + L + + E Q + A AL D + + ++++ E
Sbjct: 69 KQQEEARCLLAPGTQPLPEG----QDLLPAAPSSCPAPPTALMPGGEPDWVTQFVQRKEE 124
Query: 144 -------KRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERDGLENETQEL 190
K ++S R +E ++ + + ++ R+EEE L ++EL
Sbjct: 125 RELAERVKEEQSRRRKREERLQQTRHSAQFKRAAQRQSREEEETKALLRLSREL 178
>gi|378731863|gb|EHY58322.1| chromosome transmission fidelity protein 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 839
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGL 82
+ F P+ YDIQ FM LY ++ K GIFESPTGTGKSLSLICG L W DH+
Sbjct: 6 ANFCHPYQPYDIQLEFMTQLYRCIEGKKVGIFESPTGTGKSLSLICGALTWLRDHE---R 62
Query: 83 EKIEAKIKDLEISKNETVSEDWIEQ 107
+++ +K ++N+ +DW+ Q
Sbjct: 63 RALDSTLK----AENKDAQDDWLLQ 83
>gi|350399366|ref|XP_003485501.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Bombus
impatiens]
Length = 858
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
Query: 32 YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIEAKIKD 91
Y IQ+ FMK LY +NSK GIFESPTGTGKS+S+ICG LKW D++ + +++ + I +
Sbjct: 14 YPIQTQFMKELYKCFENSKLGIFESPTGTGKSMSIICGALKWLLDYEKLQKDELTSAISE 73
Query: 92 L--EISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDE----LIENIRKQNEKR 145
L +I + +++W Q+ ++++ + AL+ L + Y++ L E + N K+
Sbjct: 74 LDEQIKQYINSTDNWFYVQTQQIELNRKRQALQTKLNNIVQYEQKKNSLKERTKGVNSKK 133
Query: 146 KKS 148
K S
Sbjct: 134 KDS 136
>gi|451852903|gb|EMD66197.1| hypothetical protein COCSADRAFT_137550 [Cochliobolus sativus
ND90Pr]
Length = 860
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 40/55 (72%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+F P+ YDIQ+ FM +Y L+N + GIFESPTGTGKSLSLICG L W DHK
Sbjct: 9 DFHHPYTPYDIQNEFMSAVYECLENGQVGIFESPTGTGKSLSLICGSLTWLRDHK 63
>gi|119608988|gb|EAW88582.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae), isoform CRA_g [Homo sapiens]
gi|119608989|gb|EAW88583.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae), isoform CRA_h [Homo sapiens]
Length = 683
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
+E L K+E++ W+ Q + + R+ ++ LK
Sbjct: 73 EARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVNRLKA 132
Query: 124 ALKSQKTYDELIENI--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERD 181
+K +E ++ + R Q + K LR ++E + L M E + +R E+
Sbjct: 133 EQARRKQREERLQQLQHRVQLKYAAKRLRQEEEETENLLRLSREMLETGPEAERLEQLES 192
Query: 182 GLE 184
G E
Sbjct: 193 GEE 195
>gi|195432086|ref|XP_002064057.1| GK19963 [Drosophila willistoni]
gi|194160142|gb|EDW75043.1| GK19963 [Drosophila willistoni]
Length = 848
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGL 82
+EF FP++ Y+IQ M+ ++ L++ + GIFESPTGTGKSL+L C L W H+ +
Sbjct: 16 TEFGFPYEPYEIQGQLMQQVFQVLESKQIGIFESPTGTGKSLTLTCAALTWLQHHEELVR 75
Query: 83 EKIEAKIKDL--EISKNETVS---EDWIEQQSFELKMRNQIDALK--DALKSQKTYDELI 135
++ +I L EI+K + DWI +Q+ ++R ++ LK + L+ K DEL+
Sbjct: 76 SELRERIARLESEIAKLRELGGQVTDWISEQAKVQELRAELQQLKRLNELR-LKEEDELV 134
Query: 136 ENIRKQNEKRKK 147
+ IR + ++RK+
Sbjct: 135 K-IRTRGKERKR 145
>gi|189211309|ref|XP_001941985.1| TFIIH basal transcription factor complex helicase subunit
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187978078|gb|EDU44704.1| TFIIH basal transcription factor complex helicase subunit
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 850
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 67/124 (54%), Gaps = 14/124 (11%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
+F P+ YDIQ+ FM +Y L++ K GIFESPTGTGKSLSLICG L W DHK E
Sbjct: 9 DFHHPYTPYDIQNEFMGAVYKCLEDGKVGIFESPTGTGKSLSLICGSLTWLRDHKRRTFE 68
Query: 84 KIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNE 143
+ + N + WI + + K R Q +AL+ ++ ++ I + K E
Sbjct: 69 ------EGFPMDANNSGEPSWIVEHA--QKQRKQ-----EALRRKQDLNDRIAKV-KAKE 114
Query: 144 KRKK 147
KR K
Sbjct: 115 KRAK 118
>gi|390350219|ref|XP_003727367.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like, partial [Strongylocentrotus purpuratus]
Length = 161
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 35/44 (79%)
Query: 34 IQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
IQ +FMK+LY LD K GIFESPTGTGKSLSLICG LKW DH
Sbjct: 36 IQEDFMKHLYEALDGGKIGIFESPTGTGKSLSLICGALKWLTDH 79
>gi|195049542|ref|XP_001992741.1| GH24926 [Drosophila grimshawi]
gi|193893582|gb|EDV92448.1| GH24926 [Drosophila grimshawi]
Length = 843
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 77/138 (55%), Gaps = 12/138 (8%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
P AE +F FP+ Y IQ M+ L+ L++ + GIFESPTGTGKSL+L CG L W
Sbjct: 11 PAAE---DFGFPYTPYTIQEQLMQQLFLVLESKQIGIFESPTGTGKSLTLTCGALTWLRQ 67
Query: 77 HK-------IVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQK 129
H+ + + ++EA+++ L+ + + + DWI QS K R ++ L+ +
Sbjct: 68 HEQLVRSELVQRIGQVEAQLRQLQDAGEQ--ASDWITAQSKTRKHREELQQLQRLRDLWQ 125
Query: 130 TYDELIENIRKQNEKRKK 147
++ + I++++ +R +
Sbjct: 126 AKEQELLAIKQRSSQRHQ 143
>gi|396466748|ref|XP_003837763.1| similar to ATP-dependent RNA helicase chl1 [Leptosphaeria
maculans JN3]
gi|312214326|emb|CBX94319.1| similar to ATP-dependent RNA helicase chl1 [Leptosphaeria
maculans JN3]
Length = 861
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
EF P+ Y+IQ++FM +Y L++ K GIFESPTGTGKSLSLICG L W DHK
Sbjct: 9 EFHHPYTPYEIQNDFMHAVYNCLESGKVGIFESPTGTGKSLSLICGSLTWLRDHK 63
>gi|60811280|gb|AAX36168.1| DEAD/H box polypeptide 11 [synthetic construct]
Length = 971
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 79/168 (47%), Gaps = 34/168 (20%)
Query: 13 NEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILK 72
NE + + + FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L
Sbjct: 3 NETQKVGAI--HFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALS 60
Query: 73 WYYDHKIVGLEK----IEAKIKDLEISKNETV-----------------SEDWIEQQSFE 111
W D + E+ +E L K+E++ W+ Q +
Sbjct: 61 WLRDFEQKKREEEARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQK 120
Query: 112 LKMRNQIDALKDALKSQKTYDELIENIRKQNEKRKKSLRNDQEVKVHA 159
+ R+ +D LK + RKQ E+R + L++ ++K A
Sbjct: 121 KEERDLVDRLKAE-----------QARRKQREERLQQLQHRVQLKYAA 157
>gi|29792240|gb|AAH50522.1| DDX11 protein [Homo sapiens]
Length = 970
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 79/168 (47%), Gaps = 34/168 (20%)
Query: 13 NEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILK 72
NE + + + FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L
Sbjct: 3 NETQKVGAI--HFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALS 60
Query: 73 WYYDHKIVGLEK----IEAKIKDLEISKNETV-----------------SEDWIEQQSFE 111
W D + E+ +E L K+E++ W+ Q +
Sbjct: 61 WLRDFEQKKREEEARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQK 120
Query: 112 LKMRNQIDALKDALKSQKTYDELIENIRKQNEKRKKSLRNDQEVKVHA 159
+ R+ +D LK + RKQ E+R + L++ ++K A
Sbjct: 121 KEERDLVDRLKAE-----------QARRKQREERLQQLQHRVQLKYAA 157
>gi|301756631|ref|XP_002914172.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like
protein-like [Ailuropoda melanoleuca]
Length = 908
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 21/136 (15%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIV---- 80
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D +
Sbjct: 13 FPFPFTPYSIQKDFMAELYQVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKHQE 72
Query: 81 --------------GLEK---IEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKD 123
G E+ + + K+ + DW+ Q + + R+ +D LK+
Sbjct: 73 EARLLETGTILLSDGTEQPPSLSSSCKETPDTPRPAGEPDWVTQFVQKKEERDLVDRLKE 132
Query: 124 ALKSQKTYDELIENIR 139
+K +E ++ IR
Sbjct: 133 EQVRRKKREERLQQIR 148
>gi|281349618|gb|EFB25202.1| hypothetical protein PANDA_002012 [Ailuropoda melanoleuca]
Length = 897
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 21/136 (15%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIV---- 80
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D +
Sbjct: 13 FPFPFTPYSIQKDFMAELYQVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKHQE 72
Query: 81 --------------GLEK---IEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKD 123
G E+ + + K+ + DW+ Q + + R+ +D LK+
Sbjct: 73 EARLLETGTILLSDGTEQPPSLSSSCKETPDTPRPAGEPDWVTQFVQKKEERDLVDRLKE 132
Query: 124 ALKSQKTYDELIENIR 139
+K +E ++ IR
Sbjct: 133 EQVRRKKREERLQQIR 148
>gi|132566527|ref|NP_689651.1| probable ATP-dependent RNA helicase DDX11 isoform 3 [Homo sapiens]
gi|380420356|ref|NP_001244073.1| probable ATP-dependent RNA helicase DDX11 isoform 3 [Homo sapiens]
gi|74731686|sp|Q96FC9.1|DDX11_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX11; AltName:
Full=CHL1-related protein 1; Short=hCHLR1; AltName:
Full=DEAD/H box protein 11; AltName: Full=Keratinocyte
growth factor-regulated gene 2 protein; Short=KRG-2
Length = 970
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 79/168 (47%), Gaps = 34/168 (20%)
Query: 13 NEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILK 72
NE + + + FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L
Sbjct: 3 NETQKVGAI--HFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALS 60
Query: 73 WYYDHKIVGLEK----IEAKIKDLEISKNETV-----------------SEDWIEQQSFE 111
W D + E+ +E L K+E++ W+ Q +
Sbjct: 61 WLRDFEQKKREEEARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQK 120
Query: 112 LKMRNQIDALKDALKSQKTYDELIENIRKQNEKRKKSLRNDQEVKVHA 159
+ R+ +D LK + RKQ E+R + L++ ++K A
Sbjct: 121 KEERDLVDRLKAE-----------QARRKQREERLQQLQHRVQLKYAA 157
>gi|322801298|gb|EFZ21985.1| hypothetical protein SINV_11349 [Solenopsis invicta]
Length = 908
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 70/123 (56%), Gaps = 12/123 (9%)
Query: 31 AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK-------IVGLE 83
AY+IQ FM+ LY ++ K G+FESPTGTGKSLSLICG LKW DH+ + +
Sbjct: 13 AYEIQQRFMRELYSCMEGGKLGLFESPTGTGKSLSLICGALKWLVDHEKWRKQELMSAIV 72
Query: 84 KIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNE 143
+I++K+K E ++W Q+ ++K+ + L+ L + Y+ E ++K E
Sbjct: 73 EIDSKLKSC-----EKPLDNWFTVQTEQIKLNAEKQPLQAKLNALLEYEGEKEKLKKMIE 127
Query: 144 KRK 146
+K
Sbjct: 128 SQK 130
>gi|296211273|ref|XP_002752340.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Callithrix jacchus]
Length = 903
Score = 79.0 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/52 (69%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
FPFPF Y IQ +FM LY LD K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQKDFMAELYRVLDAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|195162259|ref|XP_002021973.1| GL14395 [Drosophila persimilis]
gi|194103871|gb|EDW25914.1| GL14395 [Drosophila persimilis]
Length = 861
Score = 79.0 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/146 (33%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGL 82
S+F FPF Y IQ M+ L+ L+ + GIFESPTGTGKSL+L CG L W H+ +
Sbjct: 16 SDFGFPFAPYAIQEQLMQELFSVLERRQVGIFESPTGTGKSLTLTCGALTWLRQHEELVR 75
Query: 83 EKIEAKIKDLE-----ISKNETVSEDWIEQQS------FELKMRNQIDALKDALKSQKTY 131
++ +I ++E + EDWI QS EL+ N + +L D + Q
Sbjct: 76 SELLQRIVEVEKKLDRLQAASAQEEDWISAQSESREQQVELQQLNHLCSLLDKREQQLVV 135
Query: 132 DELIENIRKQNEKRKKSLRNDQEVKV 157
RK+++K + + ++E +V
Sbjct: 136 IRERTKERKKHQKFRTRPKPEEEQQV 161
>gi|325181104|emb|CCA15517.1| ATPdependent RNA helicase putative [Albugo laibachii Nc14]
Length = 587
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYY 75
S F FP++ Y IQ +FM++L+ T++N GIFESPTGTGKS+SLICG L W +
Sbjct: 18 SYFSFPYEPYSIQLDFMRSLWQTIENEHIGIFESPTGTGKSMSLICGSLSWLF 70
>gi|125983388|ref|XP_001355459.1| GA10980 [Drosophila pseudoobscura pseudoobscura]
gi|54643775|gb|EAL32518.1| GA10980 [Drosophila pseudoobscura pseudoobscura]
Length = 861
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/146 (33%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGL 82
S+F FPF Y IQ M+ L+ L+ + GIFESPTGTGKSL+L CG L W H+ +
Sbjct: 16 SDFGFPFAPYAIQEQLMQELFSVLERRQVGIFESPTGTGKSLTLTCGALTWLRQHEELVR 75
Query: 83 EKIEAKIKDLE-----ISKNETVSEDWIEQQS------FELKMRNQIDALKDALKSQKTY 131
++ +I ++E + EDWI QS EL+ N + +L D + Q
Sbjct: 76 SELLQRIVEVEKKLDRLQAASAQEEDWISAQSESREQQVELQQLNHLCSLLDKREQQLVV 135
Query: 132 DELIENIRKQNEKRKKSLRNDQEVKV 157
RK+++K + + ++E +V
Sbjct: 136 IRERTKERKKHQKFRTRPKPEEEQQV 161
>gi|317151049|ref|XP_001824411.2| ATP-dependent RNA helicase CHL1 [Aspergillus oryzae RIB40]
Length = 858
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 38/55 (69%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
EF P+ YDIQ FM+ LY ++ K +FESPTGTGKSLS+ICG L W DHK
Sbjct: 7 EFHHPYSPYDIQLQFMRALYSCIEKGKVAVFESPTGTGKSLSIICGSLTWLRDHK 61
>gi|119493390|ref|XP_001263885.1| DEAD_2 domain protein [Neosartorya fischeri NRRL 181]
gi|206558089|sp|A1D8E4.1|CHL1_NEOFI RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|119412045|gb|EAW21988.1| DEAD_2 domain protein [Neosartorya fischeri NRRL 181]
Length = 861
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
P F P+ YDIQ FM+ LY L+ K +FESPTGTGKSLSLICG + W +HK
Sbjct: 5 PQNFNHPYSPYDIQLQFMRALYTCLEEGKVAVFESPTGTGKSLSLICGSMTWLREHK 61
>gi|84627555|gb|AAI11734.1| DDX11 protein [Homo sapiens]
Length = 906
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/156 (34%), Positives = 74/156 (47%), Gaps = 32/156 (20%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
+E L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKA 132
Query: 124 ALKSQKTYDELIENIRKQNEKRKKSLRNDQEVKVHA 159
+ RKQ E+R + L++ ++K A
Sbjct: 133 E-----------QARRKQREERLQQLQHRVQLKYAA 157
>gi|358054721|dbj|GAA99647.1| hypothetical protein E5Q_06350 [Mixia osmundae IAM 14324]
Length = 830
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 7/178 (3%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
E P +F P+ YDIQS+ M+++Y ++ S+ I ESPTGTGKSLSLIC L W D+
Sbjct: 6 EPPDDFNHPYKPYDIQSDLMRHVYKAIECSRPAIVESPTGTGKSLSLICSTLSWLRDNTA 65
Query: 80 VGLEKIEAKIKDLEISKNETVSED--WIEQQSFELKMRNQIDALKDALKSQKTYDELIEN 137
+ A DL+ T+S++ W+ +Q ++R A +D E N
Sbjct: 66 RAQTVVRA---DLQAQLAHTLSDEPAWVIEQEIARRLRELTQAEQDLTDRLTALREKEAN 122
Query: 138 IRKQNEKRKKSLRNDQEVKVHALTYRNRMDEKN--SKEKRKEEERDGLENETQELDES 193
I++ + + + + + DE+ E+ E E DGL E +++ S
Sbjct: 123 IKRAKARANHTNKRQKVSHESETSPVGDADEEKFAPDEQDGEGEDDGLTPEVRQMMHS 180
>gi|100913202|ref|NP_085911.2| probable ATP-dependent RNA helicase DDX11 isoform 1 [Homo sapiens]
Length = 906
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/156 (34%), Positives = 74/156 (47%), Gaps = 32/156 (20%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
+E L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKA 132
Query: 124 ALKSQKTYDELIENIRKQNEKRKKSLRNDQEVKVHA 159
+ RKQ E+R + L++ ++K A
Sbjct: 133 E-----------QARRKQREERLQQLQHRVQLKYAA 157
>gi|453084594|gb|EMF12638.1| DNA repair helicase [Mycosphaerella populorum SO2202]
Length = 838
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
+F PF Y IQ FM+ +Y ++ K GIFESPTGTGKSLSLICG L W +HK +
Sbjct: 5 DFHHPFQPYAIQQQFMEGVYDCIEQGKVGIFESPTGTGKSLSLICGSLTWLREHK---RK 61
Query: 84 KIEAKIKDLEISKNETVSEDWIEQQS 109
+ + +EI +E + WI + +
Sbjct: 62 TFDEAMASVEIEDDEPI---WITEHA 84
>gi|1517816|gb|AAB06962.1| helicase [Homo sapiens]
Length = 906
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/156 (34%), Positives = 74/156 (47%), Gaps = 32/156 (20%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
+E L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKA 132
Query: 124 ALKSQKTYDELIENIRKQNEKRKKSLRNDQEVKVHA 159
+ RKQ E+R + L++ ++K A
Sbjct: 133 E-----------QARRKQREERLQQLQHRVQLKYAA 157
>gi|1666893|gb|AAB18749.1| CHL1 potential helicase [Homo sapiens]
Length = 906
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/156 (34%), Positives = 74/156 (47%), Gaps = 32/156 (20%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
+E L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKA 132
Query: 124 ALKSQKTYDELIENIRKQNEKRKKSLRNDQEVKVHA 159
+ RKQ E+R + L++ ++K A
Sbjct: 133 E-----------QARRKQREERLQQLQHRVQLKYAA 157
>gi|351702333|gb|EHB05252.1| Putative ATP-dependent RNA helicase DDX11-like protein
[Heterocephalus glaber]
Length = 953
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 30 FPFPFPPYSIQKDFMAELYQVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 81
>gi|301117338|ref|XP_002906397.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
gi|262107746|gb|EEY65798.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
Length = 819
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
F FP+D Y IQ M+ ++ TL+ GIFESPTGTGKS+SLICG L W H L
Sbjct: 6 FSFPYDPYSIQLELMRQIWATLEQGHCGIFESPTGTGKSISLICGALTWLTKHTDDWLSD 65
Query: 85 IEAKIKDLEISKNETVSEDWI 105
E K D E+ + +++D +
Sbjct: 66 FEQKSADRELKYRQQMAKDAL 86
>gi|425778625|gb|EKV16743.1| hypothetical protein PDIG_19320 [Penicillium digitatum PHI26]
gi|425784169|gb|EKV21962.1| hypothetical protein PDIP_01290 [Penicillium digitatum Pd1]
Length = 974
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 39/55 (70%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+F P+ Y+IQ FM+ LY L++ K +FESPTGTGKSLSLICG L W DHK
Sbjct: 2 DFHHPYTPYEIQLQFMQALYACLEDGKIAVFESPTGTGKSLSLICGSLTWLRDHK 56
>gi|317032533|ref|XP_001395061.2| ATP-dependent RNA helicase CHL1 [Aspergillus niger CBS 513.88]
Length = 834
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 37/55 (67%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+F P+ YDIQ M+ LY L+ K +FESPTGTGKSLSLICG L W DHK
Sbjct: 7 DFHHPYSPYDIQLQLMRALYSCLEQGKVAVFESPTGTGKSLSLICGSLTWLRDHK 61
>gi|206558115|sp|A2QY22.1|CHL1_ASPNC RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|134079766|emb|CAK40902.1| unnamed protein product [Aspergillus niger]
Length = 874
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 37/55 (67%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+F P+ YDIQ M+ LY L+ K +FESPTGTGKSLSLICG L W DHK
Sbjct: 7 DFHHPYSPYDIQLQLMRALYSCLEQGKVAVFESPTGTGKSLSLICGSLTWLRDHK 61
>gi|149712588|ref|XP_001490646.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Equus
caballus]
Length = 906
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQKDFMAELYQVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|398396280|ref|XP_003851598.1| hypothetical protein MYCGRDRAFT_86617 [Zymoseptoria tritici
IPO323]
gi|339471478|gb|EGP86574.1| hypothetical protein MYCGRDRAFT_86617 [Zymoseptoria tritici
IPO323]
Length = 825
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+F PF YDIQ FM+ +Y ++ SK GIFESPTGTGKSLSLICG L W ++K
Sbjct: 5 DFHHPFTPYDIQQQFMEAVYKCIEESKVGIFESPTGTGKSLSLICGALTWLRENK 59
>gi|299116766|emb|CBN74879.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1076
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 1 MASKTPNEDKEFNEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
M+S NE + +E P E + PFPF+ YD+Q M+ +Y TL+N GIFESPTGT
Sbjct: 1 MSSGGDNEMRGRDEGPPREE--PDIPFPFEPYDVQKQLMRKIYSTLENGGIGIFESPTGT 58
Query: 61 GKSLSLICGILKWYYD 76
GKSLS+IC L+W D
Sbjct: 59 GKSLSVICSALQWLKD 74
>gi|449542207|gb|EMD33187.1| hypothetical protein CERSUDRAFT_108361 [Ceriporiopsis subvermispora
B]
Length = 954
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 22 PSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIV 80
PS FP FPF YDIQ + MK+LY ++++ K I ESPTGTGK+LSL+CG L W D
Sbjct: 9 PSSFPAFPFVPYDIQLSLMKHLYSSIEDRKVAIVESPTGTGKTLSLLCGSLTWLLD---- 64
Query: 81 GLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMR 115
E+ A+ ++ E+ DW+ Q+ + R
Sbjct: 65 --EQARARKGEINAITGESGDPDWVLAQTLARRKR 97
>gi|345792101|ref|XP_543872.3| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Canis
lupus familiaris]
Length = 905
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 21/147 (14%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIV---- 80
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLS+ICG L W D +
Sbjct: 13 FPFPFTPYSIQKDFMAELYRVLEAGKIGIFESPTGTGKSLSVICGALSWLRDFEQKKHQE 72
Query: 81 --------------GLEK---IEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKD 123
G E+ + A K + + DW+ Q + + R+ +D LK+
Sbjct: 73 EARLLKAGTTPLNDGKEQPPPLSASCKRTPDTLSPAGEPDWVTQFVQKKEERDLVDRLKE 132
Query: 124 ALKSQKTYDELIENIRKQNEKRKKSLR 150
+K +E ++ +R + + + R
Sbjct: 133 EQVRRKKREERLQQMRHNAQLKYAAKR 159
>gi|195397135|ref|XP_002057184.1| GJ16955 [Drosophila virilis]
gi|194146951|gb|EDW62670.1| GJ16955 [Drosophila virilis]
Length = 799
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 19 AEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
A +F FP+ Y IQ M+ L+ L+ + GIFESPTGTGKSL+L CG L W H+
Sbjct: 10 APAAQDFGFPYTPYAIQEQLMQQLFLVLERKQIGIFESPTGTGKSLTLTCGALTWLRQHE 69
Query: 79 IVGLEKIEAKIKDLE-----ISKNETVSEDWIEQQSFELKMRNQIDALK 122
+ ++ +I ++E + +EDWI QS R ++ L+
Sbjct: 70 QLVRAELLQRIGEVEAELCRLQAASAQAEDWITAQSNTRAQREELAQLQ 118
>gi|403309188|ref|XP_003945007.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Saimiri boliviensis boliviensis]
Length = 903
Score = 76.6 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQKDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|353235657|emb|CCA67667.1| related to CHL1-protein of the DEAH box family [Piriformospora
indica DSM 11827]
Length = 769
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 5/101 (4%)
Query: 17 PLAEVPSEFP-FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY 74
P VP EFP FP+D Y+IQ + M++L+ ++ + + ESPTGTGK+LSL+ G L W
Sbjct: 4 PALPVPEEFPIFPYDKPYNIQLDLMRHLFAAIEGKQVAVVESPTGTGKTLSLLSGSLTWL 63
Query: 75 YDHKIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMR 115
D K ++ + LE S ++ + DW+ +QS E R
Sbjct: 64 QDEKS---RAVKGQFAQLEESYSKDNAPDWLVKQSIEFARR 101
>gi|320034910|gb|EFW16853.1| ATP-dependent RNA helicase [Coccidioides posadasii str. Silveira]
Length = 905
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 56/104 (53%), Gaps = 19/104 (18%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT----------GKSLSLICGILKWY 74
F P+ YDIQ FM++LY ++ K GIFESPTGT GKSLSLICG L W
Sbjct: 8 FYHPYSPYDIQVQFMRSLYTCIEECKVGIFESPTGTVSILTPEGGVGKSLSLICGSLTWL 67
Query: 75 YDHK-IVGLEKIE-----AKIKDLEISKNETVSED---WIEQQS 109
DHK V LE IE A I + ++ + +D WI Q S
Sbjct: 68 RDHKRSVFLEDIENSDGRATIACEQFGADQYIGDDEPEWILQYS 111
>gi|170582249|ref|XP_001896044.1| helicase [Brugia malayi]
gi|158596835|gb|EDP35112.1| helicase, putative [Brugia malayi]
Length = 733
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 77/132 (58%), Gaps = 19/132 (14%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YYDHKI 79
+EF FPF+ YDIQ + M+++ ++ K GI ESPTGTGKS+S+IC L W + +
Sbjct: 2 AEFSFPFEPYDIQVSLMRSIISCINEGKIGILESPTGTGKSMSIICATLTWLEXFEAERK 61
Query: 80 VGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIR 139
V LEK ++K +E + +DW+ ++ A++DA ++ Y EL EN +
Sbjct: 62 VNLEK---QLKXVEXVGKD---DDWLNAHI------KKVKAVEDA---KEFYSEL-ENDQ 105
Query: 140 KQNEKRKKSLRN 151
K E+ +K+L+N
Sbjct: 106 KIEERIQKALKN 117
>gi|100913204|ref|NP_004390.3| probable ATP-dependent RNA helicase DDX11 isoform 2 [Homo sapiens]
Length = 856
Score = 76.3 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 54/156 (34%), Positives = 74/156 (47%), Gaps = 32/156 (20%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
+E L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKA 132
Query: 124 ALKSQKTYDELIENIRKQNEKRKKSLRNDQEVKVHA 159
+ RKQ E+R + L++ ++K A
Sbjct: 133 E-----------QARRKQREERLQQLQHRVQLKYAA 157
>gi|344278065|ref|XP_003410817.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Loxodonta africana]
Length = 904
Score = 75.9 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 34/53 (64%), Positives = 38/53 (71%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
+FPFP+ Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 12 KFPFPYTPYSIQKDFMTELYKVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|348688344|gb|EGZ28158.1| hypothetical protein PHYSODRAFT_470654 [Phytophthora sojae]
Length = 826
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 75/162 (46%), Gaps = 38/162 (23%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
F FP++ Y IQ + M+ ++ TL+ GIFESPTGTGKS+SLICG L W H L
Sbjct: 6 FSFPYEPYSIQLDLMRQIWETLERGHCGIFESPTGTGKSISLICGALTWLTKHTDDWLSD 65
Query: 85 IEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNE- 143
E K D E+ K R Q+ K+AL IE +R + E
Sbjct: 66 FEQKTADQEV------------------KFRQQM--AKEALAG-------IEKLRLEPEA 98
Query: 144 ---KRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERDG 182
KRK ++ + T R R + NS +E ++DG
Sbjct: 99 TTKKRKMAI-------AYNYTDRKRGRQSNSTSSSRERKQDG 133
>gi|290991586|ref|XP_002678416.1| DEAD/DEAH box helicase [Naegleria gruberi]
gi|284092028|gb|EFC45672.1| DEAD/DEAH box helicase [Naegleria gruberi]
Length = 902
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 25 FPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
F FP++ YDIQ +M+ L+ T+ + K GIFESPTG+GKSLSLICG L W Y H
Sbjct: 44 FSFPYEKPYDIQQQYMEQLFDTIQSGKVGIFESPTGSGKSLSLICGALSWLYAH 97
>gi|268574822|ref|XP_002642390.1| Hypothetical protein CBG18394 [Caenorhabditis briggsae]
Length = 834
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 15/124 (12%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
EF FPF YDIQ M+ + +++ K GIFESPTGTGKSLS++C L W + +
Sbjct: 3 EFSFPFQPYDIQLRLMREIRDCIEDGKVGIFESPTGTGKSLSVLCSTLTWLENEE----N 58
Query: 84 KIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNE 143
+IE ++ + E ++E S+E DALK +L+++K E++E I E
Sbjct: 59 RIETELNEKLRKIQENIAESKKSGASWE-------DALKLSLEAEKEESEVMEAI----E 107
Query: 144 KRKK 147
KRK+
Sbjct: 108 KRKR 111
>gi|170089159|ref|XP_001875802.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649062|gb|EDR13304.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 854
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 20 EVPSEFP-FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
+ P FP FP+D Y IQ + M++LY +++ I ESPTGTGK+LSL+C L W D
Sbjct: 6 DTPDAFPAFPYDPPYSIQVDLMRHLYTSIEQRAVTIVESPTGTGKTLSLLCAALTWLSD- 64
Query: 78 KIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQID 119
EK A+ L+ + ++ ++DW+ +Q+ E +MR ++
Sbjct: 65 -----EKERARRGKLKAAADDGTAKDWVIEQTME-RMRRDLE 100
>gi|388854508|emb|CCF51895.1| related to CHL1-protein of the DEAH box family [Ustilago hordei]
Length = 931
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 27/150 (18%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
LA +FPFP +AY IQ + M+ ++ T+++ K GIFESPTGTGKSLSLIC W +
Sbjct: 21 LASRQFQFPFP-EAYSIQLDLMRQVFSTIEDGKVGIFESPTGTGKSLSLICAAFTWLRQN 79
Query: 78 KIVGLEKIEAKIKDLEISKNE-----TVSE-DWIEQ----------QSFELKMRNQID-- 119
+ G +K S NE T+ E DW+ Q +++++ +R +I
Sbjct: 80 EQRG-------VKGSSGSSNERNSVGTLDEPDWVVQHEQERKRKQHEAYQIDLRERIAVA 132
Query: 120 -ALKDALKSQKTYDELIENIRKQNEKRKKS 148
A + ALK + L ++ R +R +
Sbjct: 133 RAKQAALKQSRRDGMLAKDARAAKRQRSSA 162
>gi|367047197|ref|XP_003653978.1| hypothetical protein THITE_2116524 [Thielavia terrestris NRRL
8126]
gi|347001241|gb|AEO67642.1| hypothetical protein THITE_2116524 [Thielavia terrestris NRRL
8126]
Length = 223
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
P +F P+ YD+Q FM+ +Y L+ N + GI ESPTGTGKSLSLIC L W HK
Sbjct: 16 PIDFHHPYQPYDVQLQFMRTVYDVLEKGNGQVGILESPTGTGKSLSLICASLTWLRAHK 74
>gi|449300032|gb|EMC96045.1| hypothetical protein BAUCODRAFT_514453 [Baudoinia compniacensis
UAMH 10762]
Length = 831
Score = 73.2 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 44/68 (64%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVG 81
P +F PF YDIQ FM+ +Y +++ K GIFESPTGTGKSLSLIC L W ++K
Sbjct: 3 PKDFHHPFQPYDIQQQFMEAMYDCIEDGKVGIFESPTGTGKSLSLICASLTWLREYKRKA 62
Query: 82 LEKIEAKI 89
++ A I
Sbjct: 63 FDEALATI 70
>gi|380495771|emb|CCF32142.1| DNA repair helicase [Colletotrichum higginsianum]
Length = 896
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 29/166 (17%)
Query: 21 VPSEFPF--PFDAYDIQSNFMKNLYYTL--DNSKFGIFESPTGTGKSLSLICGILKWYYD 76
VP++ F P+ YD+Q++FMK Y L N + GI ESPTGTGKSLSLIC L W +
Sbjct: 13 VPNDIDFNHPYTPYDVQTDFMKTAYGVLQRGNGQVGILESPTGTGKSLSLICASLTWLRN 72
Query: 77 HKIVGLEKIEAKIK-DLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELI 135
++ E+ EA +K +++ K+E DWI +Q +R + +AL +T++E
Sbjct: 73 QRV---EEHEASLKVNMDDFKDE---PDWIVEQ----MLRRKREALA------RTWEE-- 114
Query: 136 ENIRKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERD 181
EK+ + +R ++ R R D+ S+ K + E D
Sbjct: 115 ------REKKLEQIRQKEKAIEARSAKRRRFDDGPSEPKTRRTEED 154
>gi|448110971|ref|XP_004201733.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
gi|359464722|emb|CCE88427.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
Length = 824
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 16/174 (9%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGL 82
+F PF+ YDIQ M+++Y +DN K GIFESPTGTGK+LS+IC + W ++K +
Sbjct: 13 GKFNHPFEPYDIQLELMRSIYDAIDNYKIGIFESPTGTGKTLSIICSTMTWLRNNKKRAI 72
Query: 83 EKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKS-----QKTYDEL-IE 136
EK + + + +W+ + ++ + + ++A ++ +KTYD +E
Sbjct: 73 EKKLTQNESDSDPSSSDDEPEWV-RNAYNSNLLHGVEARAHEYETLLNDLEKTYDHTHLE 131
Query: 137 NIRKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERDGLENETQEL 190
N+ ++ K S DQ + V D + E K E L E EL
Sbjct: 132 NLEAPTKRTKISSNEDQLLPV---------DYHSDTEDSKSVESAKLSKEVIEL 176
>gi|392591953|gb|EIW81280.1| DNA repair helicase [Coniophora puteana RWD-64-598 SS2]
Length = 867
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 9/99 (9%)
Query: 22 PSEFP-FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
P FP FP+D Y IQ++ M+++Y +++ K I ESPTGTGK+LSL+C L W D
Sbjct: 8 PDTFPAFPYDPPYSIQTDLMRHVYASIEGRKVTIVESPTGTGKTLSLLCSSLTWLND--- 64
Query: 80 VGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQI 118
EK A+ LE S + + W+ S ++ M+ Q+
Sbjct: 65 ---EKNRARKGLLEASTSTSTMPSWVSAHSIQV-MQQQL 99
>gi|118388514|ref|XP_001027354.1| DNA repair helicase [Tetrahymena thermophila]
gi|89309124|gb|EAS07112.1| DNA repair helicase [Tetrahymena thermophila SB210]
Length = 836
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
FP++ YDIQ F NLY +L+ K IFESPTGTGKSLSLICG W+ D++
Sbjct: 18 FPYNPYDIQLEFSLNLYESLNVKKLCIFESPTGTGKSLSLICGAFNWFKDNQ 69
>gi|212545032|ref|XP_002152670.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210065639|gb|EEA19733.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 887
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT--GKSLSLICGILKWYYDHK 78
+F P+ YDIQ FM +LY ++ K GIFESPTG GKSLSLICG L W DHK
Sbjct: 9 KFYHPYTPYDIQLQFMSSLYDCIEAGKVGIFESPTGPCQGKSLSLICGALTWLRDHK 65
>gi|296804606|ref|XP_002843155.1| DEAD_2 domain-containing protein [Arthroderma otae CBS 113480]
gi|238845757|gb|EEQ35419.1| DEAD_2 domain-containing protein [Arthroderma otae CBS 113480]
Length = 854
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 26/167 (15%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTG---TGKSLSLICGILKWYYDHK-I 79
+F P+ YDIQ+ FM+ LY +++ GIFESPTG GKSLSLICG L W HK
Sbjct: 4 DFRHPYRPYDIQAQFMEALYGCIEDGGIGIFESPTGESTAGKSLSLICGSLAWLRHHKRS 63
Query: 80 VGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIR 139
V LEK + DW+ Q + + R + L +K ++ + +R
Sbjct: 64 VFLEKADDDDDG---------EPDWMVQHARRERTR-------ELLARRKELEDRLARVR 107
Query: 140 KQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEE-ERDGLEN 185
+ E+ +K L E+ + + R+DEK E R+E+ E D E+
Sbjct: 108 EAEERHRKKL----ELASRSFK-KMRVDEKARSETREEDFELDDYES 149
>gi|242207140|ref|XP_002469424.1| predicted protein [Postia placenta Mad-698-R]
gi|220731453|gb|EED85297.1| predicted protein [Postia placenta Mad-698-R]
Length = 785
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 20 EVPSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+ PSEFP FPF YDIQ + M++LY ++++ K I ESPTGTGK+LSL+C L W D
Sbjct: 6 QTPSEFPAFPFKPYDIQLDLMRHLYASVEDRKITIVESPTGTGKTLSLLCSSLTWLKD-- 63
Query: 79 IVGLEKIEAKIKDLEISKNETVSEDWIEQQSFEL 112
E+ A+ L DW+ Q+ +L
Sbjct: 64 ----EQERARKGKLSELGESHEGPDWVLAQTLDL 93
>gi|409044127|gb|EKM53609.1| hypothetical protein PHACADRAFT_148290 [Phanerochaete carnosa
HHB-10118-sp]
Length = 859
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 22 PSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
P+ FP FPF YDIQ M++LY ++N + + ESPTGTGK+LSL+C L W D
Sbjct: 8 PTSFPAFPFAPYDIQLGLMRHLYENIENRRVTVVESPTGTGKTLSLLCASLTWLRD 63
>gi|389637597|ref|XP_003716432.1| DEAD_2 domain-containing protein [Magnaporthe oryzae 70-15]
gi|351642251|gb|EHA50113.1| DEAD_2 domain-containing protein [Magnaporthe oryzae 70-15]
Length = 921
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYYDHKIVG 81
+F PF YD+Q +FMK +Y L + GI ESPTGTGKSLSLIC L W +K
Sbjct: 9 DFNHPFTPYDVQLDFMKTVYGVLQRGEGQVGILESPTGTGKSLSLICACLTWLRHYKKKR 68
Query: 82 LEKIEAKIKDLEISKNETVSE-DWIEQQSFELK 113
E LE + + T +E DW+ +Q+ K
Sbjct: 69 FE------VSLETAASSTTNEPDWVVEQALHRK 95
>gi|430812749|emb|CCJ29870.1| unnamed protein product [Pneumocystis jirovecii]
Length = 850
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
F PF Y IQ+ FM+ LY ++ IF+SPTGTGKSLS+ICG L W +H + LE+
Sbjct: 7 FHHPFKPYKIQNEFMEALYLAIEAGGVSIFDSPTGTGKSLSIICGALTWLREHDYICLEE 66
Query: 85 IEAKIKDLEISKNETVSEDWIEQQSFELKMR 115
+ K+++ + E + + IE++ L+MR
Sbjct: 67 AQ---KNVQSDEPEWIIKYEIEEKKKSLQMR 94
>gi|149248494|ref|XP_001528634.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|206558158|sp|A5DUW8.1|CHL1_LODEL RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|146448588|gb|EDK42976.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 892
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYY 75
P A ++ P+D YDIQ FM LY TL N K G+FESPTGTGK+LS+IC + W
Sbjct: 7 PSARTCRDYHHPYDPYDIQLQFMDALYETLQNGYKIGMFESPTGTGKTLSIICSSMTWLR 66
Query: 76 DHK 78
D+K
Sbjct: 67 DYK 69
>gi|341878721|gb|EGT34656.1| hypothetical protein CAEBREN_18601 [Caenorhabditis brenneri]
Length = 830
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK-IVGL 82
EF FPF YDIQ M+ + L+ K GIFESPTGTGKSLS++C + W + + +
Sbjct: 3 EFSFPFKPYDIQLRLMREIRDCLEQGKVGIFESPTGTGKSLSVLCSTMTWLENEEDRINK 62
Query: 83 EKIE--AKIKDLEISKNETVSEDW 104
E IE AK + EI ++E +EDW
Sbjct: 63 ELIERLAKTRK-EIRESEKSTEDW 85
>gi|443897877|dbj|GAC75216.1| helicase of the DEAD superfamily [Pseudozyma antarctica T-34]
Length = 1454
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 21/143 (14%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
LA FP+P AY IQ + M+ ++ T+++ K G+FESPTGTGKSLSLIC W +
Sbjct: 21 LASRDFSFPYP-QAYSIQLDLMRQVFSTIEDGKVGLFESPTGTGKSLSLICAAFTWLRQN 79
Query: 78 KIVGLEKIEAKIKDLEISKNETVSEDWIEQ----------QSFELKMRNQIDALKDALKS 127
G + A+ D E DW+ Q +S EL+++ +I A + S
Sbjct: 80 AKRGTHGLGARGSDDE--------PDWVVQHAQDRKRKAHESHELELKERIAAARARQSS 131
Query: 128 --QKTYDELIENIRKQNEKRKKS 148
++ DE I R ++ + S
Sbjct: 132 LKRRRLDESIPETRSHADREQDS 154
>gi|50549437|ref|XP_502189.1| YALI0C23639p [Yarrowia lipolytica]
gi|74635004|sp|Q6CAX3.1|CHL1_YARLI RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|49648056|emb|CAG82511.1| YALI0C23639p [Yarrowia lipolytica CLIB122]
Length = 803
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
EF P+ Y IQ +FM+ LY +++ K GIFESPTGTGK+LSLICG + W L
Sbjct: 8 EFSHPYTPYPIQVDFMEALYDCIESYKVGIFESPTGTGKTLSLICGSMTW--------LR 59
Query: 84 KIEAKIKDLEISKNETVSEDWIEQQSFEL 112
K +A++ S +E W+ +Q+ +L
Sbjct: 60 KNKAQLAVSTASADEN-EPAWVLEQTIQL 87
>gi|448096961|ref|XP_004198556.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
gi|359379978|emb|CCE82219.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
Length = 824
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
F PF+ YDIQ M+++Y ++N K GIFESPTGTGK+LS+IC + W ++K +E+
Sbjct: 15 FNHPFEPYDIQLELMRSIYDAIENYKIGIFESPTGTGKTLSIICSTMTWLRNNKKKAIER 74
Query: 85 IEAKIKDLEISKNETVSEDWIEQ-------QSFELKMRNQIDALKDALKSQKTYDEL-IE 136
+ S + +W++ Q E K L D +KTYD +E
Sbjct: 75 KLTQNASDSDSSSSDDEPEWVKNAYNSNLLQGVEAKAHEYETMLNDL---EKTYDHTHLE 131
Query: 137 NIRKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERDGLENETQEL 190
N+ ++ K S DQ + V D + E K E L E EL
Sbjct: 132 NLEAPTKRSKISSDEDQLLPV---------DYHSDTEDSKSAESMKLSKEVSEL 176
>gi|392896452|ref|NP_499295.2| Protein CHL-1 [Caenorhabditis elegans]
gi|269993268|emb|CAA88959.2| Protein CHL-1 [Caenorhabditis elegans]
Length = 830
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
EF FPF YDIQ N M+ + ++ K GIFESPTGTGKSLS++C + W
Sbjct: 3 EFSFPFQPYDIQLNLMREIRQCIEQRKIGIFESPTGTGKSLSVLCSTMTW 52
>gi|224059074|ref|XP_002299703.1| predicted protein [Populus trichocarpa]
gi|222846961|gb|EEE84508.1| predicted protein [Populus trichocarpa]
Length = 918
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
FP+ Y IQ +FMK LY++L+ I ESPTGTGK+LS+IC L+W YD +
Sbjct: 6 FPYKPYSIQIDFMKALYHSLNQGGVSILESPTGTGKTLSIICSALQWVYDRR 57
>gi|452840275|gb|EME42213.1| hypothetical protein DOTSEDRAFT_81172 [Dothistroma septosporum
NZE10]
Length = 836
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 36/54 (66%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
F PF+ Y IQ +FM +Y ++ GIFESPTGTGKSLSL+C L W +HK
Sbjct: 6 FHHPFEPYSIQLDFMTAMYDCIEEGSVGIFESPTGTGKSLSLLCASLTWLREHK 59
>gi|299743627|ref|XP_001835886.2| CHL1 helicase [Coprinopsis cinerea okayama7#130]
gi|298405743|gb|EAU85951.2| CHL1 helicase [Coprinopsis cinerea okayama7#130]
Length = 905
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 73/128 (57%), Gaps = 12/128 (9%)
Query: 22 PSEFP-FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
PS+FP FP+D Y IQ + M+++Y ++ I ESPTGTGK+L+L+C L W D K
Sbjct: 54 PSDFPAFPYDPPYAIQVDLMRHVYEAIEKKHVTIVESPTGTGKTLTLLCSSLTWLLDEKD 113
Query: 80 VGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIR 139
+ K+K++ E +DW+ +Q+ ++R +++A ++ Y+E + R
Sbjct: 114 ---RARKGKLKEVAGVDGEEEVKDWVIEQTLA-RVRREMEA------DEREYEEKLARAR 163
Query: 140 KQNEKRKK 147
K+ E+ ++
Sbjct: 164 KREEQLRR 171
>gi|156050655|ref|XP_001591289.1| hypothetical protein SS1G_07915 [Sclerotinia sclerotiorum 1980]
gi|206557752|sp|A7ERG1.1|CHL1_SCLS1 RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|154692315|gb|EDN92053.1| hypothetical protein SS1G_07915 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 902
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 36/55 (65%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+F P+ Y IQ FM+ +Y L+ K GI ESPTGTGKSLSLICG L W D K
Sbjct: 18 DFHHPYTPYPIQEKFMQTVYDVLEQGKIGILESPTGTGKSLSLICGSLTWLRDFK 72
>gi|147789151|emb|CAN73493.1| hypothetical protein VITISV_017477 [Vitis vinifera]
Length = 914
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 22 PSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
P +FP FP++ Y IQ +FMK LY +L+ + ESPTGTGK+LS+IC L+W D K
Sbjct: 6 PPKFPAFPYEPYSIQIDFMKALYRSLNKGGVSMLESPTGTGKTLSIICSALQWLVDRK 63
>gi|297743271|emb|CBI36138.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 22 PSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
P +FP FP++ Y IQ +FMK LY +L+ + ESPTGTGK+LS+IC L+W D K
Sbjct: 6 PPKFPAFPYEPYSIQIDFMKALYRSLNKGGVSMLESPTGTGKTLSIICSALQWLVDRK 63
>gi|302889483|ref|XP_003043627.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256724544|gb|EEU37914.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 863
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+F P+ YD+Q FMK +Y L+ N + GI ESPTGTGKSLSLIC L W +HK
Sbjct: 17 DFHHPYTPYDVQEQFMKTVYNVLETGNGQVGILESPTGTGKSLSLICASLTWLRNHK 73
>gi|225442629|ref|XP_002279503.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Vitis
vinifera]
Length = 961
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 22 PSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
P +FP FP++ Y IQ +FMK LY +L+ + ESPTGTGK+LS+IC L+W D K
Sbjct: 70 PPKFPAFPYEPYSIQIDFMKALYRSLNKGGVSMLESPTGTGKTLSIICSALQWLVDRK 127
>gi|440633923|gb|ELR03842.1| hypothetical protein GMDG_01371 [Geomyces destructans 20631-21]
Length = 874
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 34/185 (18%)
Query: 6 PNEDKEFNEQRPLAEVPS----EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTG 59
P +D F + A+ P+ +F P+ Y IQ +FM+ +Y L+ +S GI ESPTG
Sbjct: 2 PKQDSLFYDAVAEADNPAMLAVDFHHPYTPYSIQEDFMQTVYSVLERGDSSVGILESPTG 61
Query: 60 TGKSLSLICGILKWYYDHKIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQID 119
TGKSLSLIC L W ++K E+ +++ NE +W+ + + K R +
Sbjct: 62 TGKSLSLICASLTWLREYKRQCFEEW------MKMDSNEEDEPEWVIEAA---KARKR-- 110
Query: 120 ALKDALKSQKTYDELIENIRKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEE 179
K+ L+ ++ ++ +EN RK+ KK + + K K +R EE
Sbjct: 111 --KELLRHREDMEKRLENARKKEAAMKKRMLGES---------------KGGKRRRVEEG 153
Query: 180 RDGLE 184
G+E
Sbjct: 154 GLGME 158
>gi|358383392|gb|EHK21058.1| hypothetical protein TRIVIDRAFT_59546 [Trichoderma virens Gv29-8]
Length = 872
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSK--FGIFESPTGTGKSLSLICGILKWYYDHK 78
+F PF YD+Q+ FM+ +Y L+ + GI ESPTGTGKSLSLIC L W +HK
Sbjct: 18 DFHHPFTPYDVQNQFMQTVYQVLETGQGQVGILESPTGTGKSLSLICASLTWLRNHK 74
>gi|213404244|ref|XP_002172894.1| fanconi anemia group J protein [Schizosaccharomyces japonicus
yFS275]
gi|212000941|gb|EEB06601.1| fanconi anemia group J protein [Schizosaccharomyces japonicus
yFS275]
Length = 847
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 24/197 (12%)
Query: 9 DKEFNEQRPLAE-----------VPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESP 57
D + N+ PLA +F P+ Y IQ +FMK L+ ++N GIFESP
Sbjct: 11 DNDSNDLHPLASSDESLIVRKQNALKKFHHPYIPYSIQLDFMKTLFDVIENGNIGIFESP 70
Query: 58 TGTGKSLSLICGILKWYYDHKIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQ 117
TGTGKSLSL+CG L W + +GL + E+ T D +
Sbjct: 71 TGTGKSLSLLCGALTWLDERGSMGL----CSQGETELQTGTTAVSDKKHGDT-----HAD 121
Query: 118 IDALKDALKSQKT--YDELIENIRKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKR 175
D L D + SQ E +E + E R +++R ++ +K +L+ R R +
Sbjct: 122 DDGLPDWVISQGAGLQKETVEQAHAELETRLEAIRKERCMK-QSLSRRKRF-RRGPGPTE 179
Query: 176 KEEERDGLENETQELDE 192
+ GLE + L+E
Sbjct: 180 NSVKDSGLERSSASLEE 196
>gi|408390405|gb|EKJ69805.1| hypothetical protein FPSE_10005 [Fusarium pseudograminearum
CS3096]
Length = 863
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+F P+ YD+Q FMK +Y L+ N + GI ESPTGTGKSLSLIC L W +HK
Sbjct: 17 DFHHPYTPYDVQEQFMKAVYDVLESGNGQVGILESPTGTGKSLSLICASLTWLRNHK 73
>gi|46126959|ref|XP_388033.1| hypothetical protein FG07857.1 [Gibberella zeae PH-1]
Length = 863
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+F P+ YD+Q FMK +Y L+ N + GI ESPTGTGKSLSLIC L W +HK
Sbjct: 17 DFHHPYTPYDVQEQFMKAVYDVLESGNGQVGILESPTGTGKSLSLICASLTWLRNHK 73
>gi|307104238|gb|EFN52493.1| hypothetical protein CHLNCDRAFT_58862 [Chlorella variabilis]
Length = 1021
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 18 LAEVPSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
+AE FP FP+ Y IQ +FM LY L+ G+FESPTGTGK+LSLIC L+W D
Sbjct: 1 MAEPGRSFPAFPYPPYSIQLDFMDALYSALEQGGVGLFESPTGTGKTLSLICSSLQWLQD 60
Query: 77 HK 78
+
Sbjct: 61 QR 62
>gi|395324700|gb|EJF57135.1| DNA repair helicase [Dichomitus squalens LYAD-421 SS1]
Length = 879
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 14/127 (11%)
Query: 22 PSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIV 80
P+ FP FPF YDIQ + M++++ +++ K I ESPTGTGK+LSL+C L W
Sbjct: 8 PTHFPAFPFKPYDIQLDLMRHVFSAIEDKKVAIMESPTGTGKTLSLLCASLTWLQH---- 63
Query: 81 GLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRK 140
E+ A+ LE + DW+ Q+ E + R Q++A Y + +E RK
Sbjct: 64 --ERERARTGQLESEGGGSHGTDWVLAQTIE-RRRRQLEA------EDLEYAKRLEAARK 114
Query: 141 QNEKRKK 147
+ + +K
Sbjct: 115 REAQLRK 121
>gi|400603430|gb|EJP71028.1| DNA repair helicase [Beauveria bassiana ARSEF 2860]
Length = 868
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYYDHKI-- 79
+F PF YD+Q FM+ +Y L+ + GI ESPTGTGKSLSLIC L W +HK
Sbjct: 18 DFHHPFTPYDVQEKFMRTVYQVLETGEGQVGILESPTGTGKSLSLICASLTWLRNHKSSA 77
Query: 80 --VGLEKIEAKIKD 91
LE+ ++ KD
Sbjct: 78 YRAALEEAKSSFKD 91
>gi|449491848|ref|XP_004159020.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Cucumis
sativus]
Length = 1168
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGL 82
EFP FP+ Y IQ +FMK LY L+ + ESPTGTGK+LS+ICG L+W D +
Sbjct: 10 EFPAFPYKPYSIQFDFMKALYEYLNKGGISMLESPTGTGKTLSIICGTLQWLADQR---- 65
Query: 83 EKIEAKIKDL-------EISKNETVSEDWIEQQSFELKMRNQ 117
+K +I+D EI N DW+ + RNQ
Sbjct: 66 KKQNGEIQDGPDKTSPNEIQFNSDDEPDWMRKFVVSQDHRNQ 107
>gi|342878343|gb|EGU79689.1| hypothetical protein FOXB_09802 [Fusarium oxysporum Fo5176]
Length = 864
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+F P+ YD+Q FMK +Y L+ N + GI ESPTGTGKSLSLIC L W +HK
Sbjct: 17 DFHHPYTPYDVQEQFMKAVYDVLETGNGQVGILESPTGTGKSLSLICASLTWLRNHK 73
>gi|50312507|ref|XP_456289.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74636409|sp|Q6CIF0.1|CHL1_KLULA RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|49645425|emb|CAG98997.1| KLLA0F27181p [Kluyveromyces lactis]
Length = 807
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
F P+ YDIQ+ M+++Y L++ K GIFESPTGTGK+LSLIC + W +HK LE
Sbjct: 5 FHHPYQPYDIQTQLMEHIYELLNSGKKVGIFESPTGTGKTLSLICSTVTWLREHK---LE 61
Query: 84 KIEAKI 89
K+ +K+
Sbjct: 62 KLNSKV 67
>gi|319411548|emb|CBQ73592.1| related to CHL1-protein of the DEAH box family [Sporisorium
reilianum SRZ2]
Length = 932
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 19 AEVPS-EFPFPF-DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
AE+ S EF FP+ AY IQ + M+ ++ T+++ K G+FESPTGTGKSLSLIC W
Sbjct: 19 AELASREFQFPYPQAYSIQLDLMRQVFSTIEDGKVGLFESPTGTGKSLSLICAAFTW 75
>gi|449448180|ref|XP_004141844.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Cucumis sativus]
Length = 914
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGL 82
EFP FP+ Y IQ +FMK LY L+ + ESPTGTGK+LS+ICG L+W D +
Sbjct: 10 EFPAFPYKPYSIQFDFMKALYEYLNKGGISMLESPTGTGKTLSIICGTLQWLADQR---- 65
Query: 83 EKIEAKIKDL-------EISKNETVSEDWIEQQSFELKMRNQ 117
+K +I+D EI N DW+ + RNQ
Sbjct: 66 KKQNGEIQDGPDKTSPNEIQFNSDDEPDWMRKFVVSQDHRNQ 107
>gi|428173412|gb|EKX42314.1| hypothetical protein GUITHDRAFT_141266 [Guillardia theta
CCMP2712]
Length = 864
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 33/50 (66%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
EF FPF Y +Q M +Y L + GIFESPTGTGKS+SLIC L+W
Sbjct: 5 EFKFPFSPYTVQVQLMTAVYGALCDGAVGIFESPTGTGKSMSLICSSLRW 54
>gi|346975762|gb|EGY19214.1| fanconi anemia group J protein [Verticillium dahliae VdLs.17]
Length = 838
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTL--DNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+F P+ YD+Q+ FM Y L N + GI ESPTGTGKSLSLIC L W +HK
Sbjct: 9 DFHHPYTPYDVQTQFMTEAYKVLQTGNGQIGILESPTGTGKSLSLICAALTWLRNHK 65
>gi|148706381|gb|EDL38328.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae), isoform CRA_b [Mus musculus]
Length = 429
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 31/43 (72%)
Query: 34 IQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 58 IQKDFMAELYKVLEGGKIGIFESPTGTGKSLSLICGALSWLRD 100
>gi|171680426|ref|XP_001905158.1| hypothetical protein [Podospora anserina S mat+]
gi|170939840|emb|CAP65065.1| unnamed protein product [Podospora anserina S mat+]
Length = 154
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWY 74
P +E P +F P+ Y +Q FM+ +Y L+ N + GI ESPTGTGKSLSLIC + W
Sbjct: 4 PTSEEPIDFHHPYTPYPVQLEFMRTVYDVLERGNGQVGILESPTGTGKSLSLICSAITWL 63
Query: 75 YDHKIVGLEKIEAKIKDLEISKNETVSE-DWIEQQSFELK 113
+HK G + L+ ++ + V E +W+ + + K
Sbjct: 64 RNHKRKGFD------AGLDETRRQMVGEPEWMVETALRRK 97
>gi|310791719|gb|EFQ27246.1| DNA repair helicase [Glomerella graminicola M1.001]
Length = 897
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTL--DNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVG 81
+F P+ YD+Q++FMK Y L N + GI ESPTGTGKSLSLIC L W + ++
Sbjct: 18 DFNHPYTPYDVQTDFMKAAYRVLQRGNGQVGILESPTGTGKSLSLICASLTWLRNQRV-- 75
Query: 82 LEKIEAKIK-DLEISKNETVSEDWIEQQSFELK 113
E+ EA +K +++ K+E WI +Q K
Sbjct: 76 -EEHEASLKVNMDDFKDE---PGWIVEQMLRRK 104
>gi|297842879|ref|XP_002889321.1| hypothetical protein ARALYDRAFT_477275 [Arabidopsis lyrata subsp.
lyrata]
gi|297335162|gb|EFH65580.1| hypothetical protein ARALYDRAFT_477275 [Arabidopsis lyrata subsp.
lyrata]
Length = 868
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
EFP FP+ Y IQ +FM LY LD + ESPTGTGKSLS+IC L+W D K
Sbjct: 6 EFPAFPYKPYSIQIDFMNALYQFLDKGGVSMLESPTGTGKSLSIICSALQWLIDRK 61
>gi|15220007|ref|NP_178107.1| chromosome transmission fidelity protein 1 [Arabidopsis thaliana]
gi|12324592|gb|AAG52253.1|AC011717_21 putative helicase; 55525-51977 [Arabidopsis thaliana]
gi|332198199|gb|AEE36320.1| chromosome transmission fidelity protein 1 [Arabidopsis thaliana]
Length = 882
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
EFP FP+ Y IQ +FM LY LD + ESPTGTGKSLS+IC L+W D K
Sbjct: 6 EFPAFPYKPYSIQIDFMNALYQFLDKGGVSMLESPTGTGKSLSIICSALQWLTDRK 61
>gi|344252420|gb|EGW08524.1| putative ATP-dependent RNA helicase DDX11 [Cricetulus griseus]
Length = 502
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 31/43 (72%)
Query: 34 IQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 22 IQKDFMAELYKVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|297723833|ref|NP_001174280.1| Os05g0219800 [Oryza sativa Japonica Group]
gi|255676141|dbj|BAH93008.1| Os05g0219800, partial [Oryza sativa Japonica Group]
Length = 181
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNSK--FGIFESPTGTGKSLSLICGILKWYYDHKIV 80
+FP FPF Y IQS FM LY L + + ESPTGTGK+LS+IC L+W DH+
Sbjct: 36 DFPAFPFAPYPIQSEFMSFLYGALSSGPGALALLESPTGTGKTLSIICSALQWLVDHRDA 95
Query: 81 GLEKIEAKIKDLEISKNETVSEDWI 105
+ + DW+
Sbjct: 96 AARGSTTAAAAGGGGEGDGDEPDWM 120
>gi|403222902|dbj|BAM41033.1| uncharacterized protein TOT_030000294 [Theileria orientalis
strain Shintoku]
Length = 745
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
EF PF Y Q FMK+ Y DNS+FG+FESPTG+GK++S++C L W ++++
Sbjct: 11 EFHLPFKPYPNQLIFMKDAYECFDNSRFGLFESPTGSGKTVSILCSALTWLKNNRV 66
>gi|294654380|ref|XP_456430.2| DEHA2A02112p [Debaryomyces hansenii CBS767]
gi|218511979|sp|Q6BZD9.2|CHL1_DEBHA RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|199428836|emb|CAG84382.2| DEHA2A02112p [Debaryomyces hansenii CBS767]
Length = 820
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 28 PFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
PF+ YDIQ M +Y +DN K G+FESPTGTGK+LSLIC + W ++K
Sbjct: 19 PFEPYDIQIQLMDAIYDAIDNYKIGLFESPTGTGKTLSLICSSMTWLREYK 69
>gi|358390776|gb|EHK40181.1| hypothetical protein TRIATDRAFT_296192 [Trichoderma atroviride
IMI 206040]
Length = 871
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYYDHKI-- 79
+F PF Y +Q+ FM+ +Y L + GI ESPTGTGKSLSLIC L W +HK
Sbjct: 17 DFHHPFTPYTVQNQFMRTVYQILQTGEGQVGILESPTGTGKSLSLICASLTWLRNHKATE 76
Query: 80 --VGLEKIEAKIKD 91
V LE+ KD
Sbjct: 77 QEVALEQAGEAYKD 90
>gi|357129541|ref|XP_003566420.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Brachypodium distachyon]
Length = 932
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYYDHK 78
+FP FPF Y IQS FM LY L + + ESPTGTGK+LS+IC L+W DH+
Sbjct: 82 DFPAFPFTPYPIQSEFMSFLYAALSSGPRALALLESPTGTGKTLSIICSALQWLVDHR 139
>gi|256073269|ref|XP_002572954.1| chl1 helicase homolog [Schistosoma mansoni]
gi|353230973|emb|CCD77390.1| putative chl1 helicase homolog [Schistosoma mansoni]
Length = 830
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 1 MASKTPNEDKEFNEQ-RPLAEVPSEF---PFPFDAYDIQSNFMKNLYYTLDNSKFGIFES 56
+ T NE N++ L P +F P+P Y Q M+ +Y TL+++ GIFES
Sbjct: 35 ITGSTENEINSVNDKLHSLITTPDQFIDFPYP-KPYSQQLELMQTVYKTLESNCCGIFES 93
Query: 57 PTGTGKSLSLICGILKWYYDH---KIVGLEKIEAKIKDL--EISKNETVSEDWIEQQSFE 111
PTGTGKSLSL+ L+W D+ +I+ L +++++K + E +N + DWI +
Sbjct: 94 PTGTGKSLSLLTATLRWLLDYNEKQIILLNSLQSQLKLMNHENKENNSKEYDWIMEYDKN 153
Query: 112 LKMRNQIDALKDALKSQKTYDELIENIR 139
++ QI+ + L ++ +LIE I+
Sbjct: 154 RLLKQQIEPQIEDLLIYQSNLQLIEKIK 181
>gi|393243158|gb|EJD50674.1| DNA repair helicase [Auricularia delicata TFB-10046 SS5]
Length = 801
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 22 PSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIV 80
P FP FPF Y IQ MK+LY ++ SK I ESPTGTGK+LSLIC L+W D
Sbjct: 12 PDAFPQFPFPPYSIQLELMKHLYAAVEASKLAILESPTGTGKTLSLICSALQWLED---- 67
Query: 81 GLEKIEAKIKDLEISKNETVSED---WIEQQSFELKMRN 116
++ A+ L+ K+ E W+ +Q+ R+
Sbjct: 68 --DRERARRGQLDALKSSCADEKEPAWVVEQTIARMRRD 104
>gi|440895926|gb|ELR47985.1| Putative ATP-dependent RNA helicase DDX11, partial [Bos grunniens
mutus]
Length = 924
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 38/187 (20%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD-------- 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTG LICG L W D
Sbjct: 13 FPFPFTPYAIQKDFMAALYQVLEAGKIGIFESPTGTG---CLICGALSWLRDFEQKKRQE 69
Query: 77 -HKIVGLEK------------IEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKD 123
+++G + + + + T DWI Q + + R+ +D LK+
Sbjct: 70 EERLLGAGAPASHNGLAPALGLPSSCQGSPGTPGATGEPDWITQFVQKKEERDLVDRLKE 129
Query: 124 ALKSQKTYDELIENIRKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERDGL 183
E +R++ E R + +R++ +++ A R DE+ + R E
Sbjct: 130 ------------EQVRRKKE-RLQQIRHNAKLRFAAKRMRQE-DEETERLLRLSSEMLAT 175
Query: 184 ENETQEL 190
E +++
Sbjct: 176 GTEPEQV 182
>gi|392560811|gb|EIW53993.1| DNA repair helicase [Trametes versicolor FP-101664 SS1]
Length = 875
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 22 PSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIV 80
P +FP FPF YDIQ M ++Y ++N K I ESPTGTGK+LSL+C L W D
Sbjct: 9 PKDFPAFPFKPYDIQLELMSHVYSCIENGKVAITESPTGTGKTLSLLCASLTWLRD---- 64
Query: 81 GLEKIEAKIKDLEISKNETVSEDWIEQQS 109
E+ A+ L ++ + + DW+ Q+
Sbjct: 65 --EQERARKGKLAMNTDNDDALDWVVAQT 91
>gi|116179420|ref|XP_001219559.1| hypothetical protein CHGG_00338 [Chaetomium globosum CBS 148.51]
gi|88184635|gb|EAQ92103.1| hypothetical protein CHGG_00338 [Chaetomium globosum CBS 148.51]
Length = 979
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+F P+ YD+Q NFM+ +Y L+ N + GI ESPTGTGKSLSLIC L W HK
Sbjct: 8 DFHHPYTPYDVQLNFMRTVYDVLERGNGQVGILESPTGTGKSLSLICATLTWLRAHK 64
>gi|356522168|ref|XP_003529720.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Glycine max]
Length = 897
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
+FP FPF+ Y IQ +FM +LY +L+ + ESPTGTGK++S+IC L+W D ++
Sbjct: 9 KFPGFPFEPYSIQIDFMNSLYESLNQGGVSMLESPTGTGKTMSVICSALQWVLDRRL 65
>gi|340518246|gb|EGR48488.1| predicted protein [Trichoderma reesei QM6a]
Length = 857
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 17/176 (9%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYYDHKIVG 81
+F P+ YD+Q+ FM+ +Y L+ N + GI ESPTGTGKSLSLIC L W ++K
Sbjct: 16 DFHHPYTPYDVQNQFMQTVYQVLETGNGQVGILESPTGTGKSLSLICASLTWLRNYKAT- 74
Query: 82 LEKIEAKIKDL-EISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRK 140
+ EA +++ E K+E WI +Q K + +D K + I K
Sbjct: 75 --RQEAALQEAGESYKDEPA---WIVEQLLSRKRSELLQQWEDREKRLAS----IRLKEK 125
Query: 141 QNEKRKKSLRNDQEVKVHALTYRNRMDE----KNSKEKRKEEERDGLENETQELDE 192
E+R + R ++V T + E + E + GL E++E+ E
Sbjct: 126 AQEERGRKRRRVEDVSAVVETIADEDAEWLLDADDHEVSDRDALSGLSKESREILE 181
>gi|85001257|ref|XP_955347.1| chl1 protein [Theileria annulata strain Ankara]
gi|65303493|emb|CAI75871.1| chl1 protein, putative [Theileria annulata]
Length = 829
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 14/127 (11%)
Query: 19 AEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
AEV EF PF+ Y Q FMK+ Y D S FG+FESPTG+GK+LS++C L W +++
Sbjct: 8 AEV--EFELPFEPYPNQLIFMKDAYKCFDESSFGLFESPTGSGKTLSILCSALTWIKNNR 65
Query: 79 IVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENI 138
K LE S +E V + W+ E+ + ++ ++D +KS+ +E++
Sbjct: 66 ----SKTMMCDLGLEPSNDEKVPK-WVS----EISLNHKKKMIEDIIKSEAVK---LEDL 113
Query: 139 RKQNEKR 145
RK+ +R
Sbjct: 114 RKKISER 120
>gi|125551293|gb|EAY97002.1| hypothetical protein OsI_18924 [Oryza sativa Indica Group]
Length = 877
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYYDHK 78
+FP FPF Y IQS FM LY L + + ESPTGTGK+LS+IC L+W DH+
Sbjct: 14 DFPAFPFAPYPIQSEFMSFLYGALSSGPGALALLESPTGTGKTLSIICSALQWLVDHR 71
>gi|150863715|ref|XP_001382279.2| YPL008W (CHL1)-like protein [Scheffersomyces stipitis CBS 6054]
gi|206558237|sp|A3LN13.2|CHL1_PICST RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|149384971|gb|ABN64250.2| syntenic [Scheffersomyces stipitis CBS 6054]
Length = 835
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYYDHK 78
+ P+ YDIQ M +Y T+DN K G+FESPTGTGK+LS+IC + W D+K
Sbjct: 12 YSHPYKPYDIQIQLMDAIYDTIDNGYKIGLFESPTGTGKTLSIICSTMTWLRDYK 66
>gi|413944886|gb|AFW77535.1| hypothetical protein ZEAMMB73_304929, partial [Zea mays]
Length = 71
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNSK--FGIFESPTGTGKSLSLICGILKWYYDHK 78
+FP FPF Y IQS FM LY L + + ESPTGTGK+LS+IC L+W DH+
Sbjct: 8 DFPAFPFAPYPIQSEFMSFLYAALSSGPGALALLESPTGTGKTLSIICSALQWLLDHR 65
>gi|255723968|ref|XP_002546913.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134804|gb|EER34358.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 812
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 4/64 (6%)
Query: 16 RPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWY 74
+P E ++ P++ YDIQ M +Y+T+D+ K G+FESPTGTGK+LS+IC + W
Sbjct: 4 KPCGE---KYNHPYEPYDIQVQLMDAIYHTIDDGYKIGLFESPTGTGKTLSIICSTMTWL 60
Query: 75 YDHK 78
++K
Sbjct: 61 RNYK 64
>gi|45201086|ref|NP_986656.1| AGL010Wp [Ashbya gossypii ATCC 10895]
gi|74691951|sp|Q750G3.1|CHL1_ASHGO RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|44985869|gb|AAS54480.1| AGL010Wp [Ashbya gossypii ATCC 10895]
gi|374109907|gb|AEY98812.1| FAGL010Wp [Ashbya gossypii FDAG1]
Length = 801
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYYDHK 78
EF PF Y IQ M+ +Y L++ K GIFESPTGTGK+LSLIC W +HK
Sbjct: 4 CEFYHPFTPYRIQLELMQQIYGLLESGKKMGIFESPTGTGKTLSLICSTFTWLREHK 60
>gi|366997252|ref|XP_003678388.1| hypothetical protein NCAS_0J00700 [Naumovozyma castellii CBS 4309]
gi|342304260|emb|CCC72049.1| hypothetical protein NCAS_0J00700 [Naumovozyma castellii CBS 4309]
Length = 832
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYY 75
P P++F P+ YDIQ M+ +Y L +N K I ESPTGTGK+LSLIC + W
Sbjct: 3 PPTVSPTDFHHPYKPYDIQLQLMQCIYDVLSENKKIAILESPTGTGKTLSLICSTITWLR 62
Query: 76 DHKIVGLEKIEAKIKDLEISKNETVSEDWIEQ 107
++K L I + ++ S+N+ DW+ +
Sbjct: 63 ENKTNYLAGISNEKENNNQSENDDDEPDWVNE 94
>gi|332839865|ref|XP_520821.3| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 4 [Pan
troglodytes]
Length = 880
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 23/169 (13%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK----IEAKIKDLEI 94
M LY L+ K GIFESPTGTGKSLSLICG L W D + E+ IE L
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREEEARLIETGTGSLHD 60
Query: 95 SKNETV-----------------SEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIEN 137
K+E++ W+ Q + + R+ +D LK +K +E ++
Sbjct: 61 EKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKAEQARRKQREERLQQ 120
Query: 138 I--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERDGLE 184
+ R Q + K LR ++E + L M E + +R E+ G E
Sbjct: 121 LQHRVQLKYAAKRLRQEEEETENLLRLSREMLETGPEAERLEQLESGEE 169
>gi|357468391|ref|XP_003604480.1| ATP-dependent RNA helicase chl1 [Medicago truncatula]
gi|355505535|gb|AES86677.1| ATP-dependent RNA helicase chl1 [Medicago truncatula]
Length = 1129
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
P+ FPF Y IQ +FM LY +L++ + ESPTGTGK++S+IC L+W D +
Sbjct: 12 PNFSAFPFKPYSIQIDFMNALYQSLNHGGISMLESPTGTGKTMSVICSALQWVLDQR 68
>gi|254583620|ref|XP_002497378.1| ZYRO0F04136p [Zygosaccharomyces rouxii]
gi|238940271|emb|CAR28445.1| ZYRO0F04136p [Zygosaccharomyces rouxii]
Length = 803
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 82/175 (46%), Gaps = 30/175 (17%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
F P+D YDIQ M+ +Y L + K I ESPTGTGK+LSLIC +L W D+K
Sbjct: 5 FNHPYDPYDIQLELMRCVYDALSHGKKLCIVESPTGTGKTLSLICSVLTWLRDNK----- 59
Query: 84 KIEAKIKDLEISK-------NETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIE 136
DL + K + DW+ Q + +QI +D Y+ +E
Sbjct: 60 ------ADLLMGKDGEGQEDEDEDEPDWVNQSYVGSVLSDQIQLTQD-------YEAYLE 106
Query: 137 NIR-KQNEKRKKSLRNDQEVKVHALTYR---NRMDEKNSKEKRKEEERDGLENET 187
+R K+ R + LR+ + K++ + + NR DE +E ++E G + T
Sbjct: 107 QLRNKKIIVRDQELRDTKRRKLNRVDVKIDNNRDDEFLPQEYYSDDEEQGTDGVT 161
>gi|354547011|emb|CCE43744.1| hypothetical protein CPAR2_213880 [Candida parapsilosis]
Length = 790
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 28 PFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYYDHK 78
PF YDIQ M +Y T++N K G+FESPTGTGK+LS+IC + W D+K
Sbjct: 13 PFAPYDIQLKLMDAIYDTIENGYKIGLFESPTGTGKTLSIICSTMTWLRDYK 64
>gi|254571493|ref|XP_002492856.1| Conserved nuclear protein required to establish sister-chromatid
pairing during S-phase [Komagataella pastoris GS115]
gi|238032654|emb|CAY70677.1| Conserved nuclear protein required to establish sister-chromatid
pairing during S-phase [Komagataella pastoris GS115]
gi|328353133|emb|CCA39531.1| chromosome transmission fidelity protein 1 [Komagataella pastoris
CBS 7435]
Length = 811
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYYDHK 78
F PF YDIQ+ M +Y T+ K G+FESPTGTGK+LS+IC ++ W ++K
Sbjct: 4 FHHPFKPYDIQTQLMTAIYDTIAGGYKVGLFESPTGTGKTLSIICSVMSWLREYK 58
>gi|367007804|ref|XP_003688631.1| hypothetical protein TPHA_0P00390 [Tetrapisispora phaffii CBS
4417]
gi|357526941|emb|CCE66197.1| hypothetical protein TPHA_0P00390 [Tetrapisispora phaffii CBS
4417]
Length = 825
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLD-NSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+ F P+ YDIQ M+ +Y TL N K I ESPTGTGK+LSLIC I+ W D+K
Sbjct: 5 ANFGHPYQPYDIQIQLMQCIYDTLTQNKKLAILESPTGTGKTLSLICSIVSWLRDNK 61
>gi|242087257|ref|XP_002439461.1| hypothetical protein SORBIDRAFT_09g007182 [Sorghum bicolor]
gi|241944746|gb|EES17891.1| hypothetical protein SORBIDRAFT_09g007182 [Sorghum bicolor]
Length = 82
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNSK--FGIFESPTGTGKSLSLICGILKWYYDHK 78
+FP FPF Y IQS FM LY L + + ESPTGTGK+LS+IC L+W DH+
Sbjct: 13 DFPAFPFAPYPIQSEFMSFLYAALSSGPGALALLESPTGTGKTLSIICSALQWLLDHR 70
>gi|358336548|dbj|GAA37929.2| chromosome transmission fidelity protein 1, partial [Clonorchis
sinensis]
Length = 753
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
Query: 21 VPSEFP-FPF-DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+P EFP FPF + Y Q M+++Y TL+ S+ GIF+SPTGTGKSLSL+ L+W D
Sbjct: 78 IPKEFPDFPFPNPYPQQLALMQSIYDTLERSRCGIFQSPTGTGKSLSLLTASLRWILDRN 137
Query: 79 IVGLEKIEAKIKDL 92
++ K+KDL
Sbjct: 138 ----STVQPKLKDL 147
>gi|402885129|ref|XP_003906018.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Papio anubis]
Length = 845
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/169 (30%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK----IEAKIKDLEI 94
M LY L+ K GIFESPTGTGKSLSLICG L W D + E+ +E L
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREEEARLLETGTGPLHD 60
Query: 95 SKNETV-----------------SEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIEN 137
K+E++ W+ Q + + R+ +D LK +K +E ++
Sbjct: 61 EKDESLCLSSPCEGAAATPRPAGEPAWVTQFVQKKEERDLVDRLKAEQARRKQREERLQQ 120
Query: 138 I--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERDGLE 184
+ R Q + K LR ++E + L M E +R E+ G E
Sbjct: 121 LQHRAQFKYAAKRLRQEEEETENLLRLSREMLETGPGAERPEQLESGEE 169
>gi|315047356|ref|XP_003173053.1| hypothetical protein MGYG_05640 [Arthroderma gypseum CBS 118893]
gi|311343439|gb|EFR02642.1| hypothetical protein MGYG_05640 [Arthroderma gypseum CBS 118893]
Length = 883
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 67/151 (44%), Gaps = 40/151 (26%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTG------------------------ 59
+F P+ Y+IQ FM LY +++ GIFESPTG
Sbjct: 4 DFRHPYTPYEIQVQFMDALYGCIEDGGIGIFESPTGESRTQTVSGTASLCTADRRRDGMS 63
Query: 60 TGKSLSLICGILKWYYDHK-IVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQI 118
GKSLS+ICG L W DHK V LEK + D E DW+ Q + + R Q
Sbjct: 64 AGKSLSVICGSLAWLRDHKRSVFLEKADDDGDDGE--------PDWMVQHA--RRERTQ- 112
Query: 119 DALKDALKSQKTYDELIENIRKQNEKRKKSL 149
D L +K ++ + +R+ E+ +K L
Sbjct: 113 ----DMLARRKELEDRLARVREAEERHRKKL 139
>gi|344233991|gb|EGV65861.1| hypothetical protein CANTEDRAFT_101726 [Candida tenuis ATCC
10573]
Length = 807
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYYDHK 78
+F P++ YDIQ M +Y +D K G+FESPTGTGK+LSLIC + W HK
Sbjct: 7 KFHHPYEPYDIQLQLMGEIYEAIDKGFKVGLFESPTGTGKTLSLICATMSWLRKHK 62
>gi|255710557|ref|XP_002551562.1| KLTH0A02376p [Lachancea thermotolerans]
gi|238932939|emb|CAR21120.1| KLTH0A02376p [Lachancea thermotolerans CBS 6340]
Length = 821
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 28 PFDAYDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYYDHKI--VGLEK 84
PF YDIQ M +Y TL++ K GIFESPTGTGK+LSLIC + W +K +G K
Sbjct: 10 PFQPYDIQLQLMHQVYNTLESGKKIGIFESPTGTGKTLSLICPTVTWLRRNKAHYMGKSK 69
Query: 85 IEAKIKDLEISKNETVSED---WIEQQSFELKMRNQIDAL 121
+ D ++K++ S++ W+++ E ++ ++ AL
Sbjct: 70 ETSSSVDGNLTKSDDESDEEPSWVKEAFAESVIKEKVRAL 109
>gi|344303265|gb|EGW33539.1| ATP-dependent RNA helicase CHL1 [Spathaspora passalidarum NRRL
Y-27907]
Length = 816
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYYDHK 78
P ++ P+D Y IQ M +Y T+ N K GIFESPTGTGK+LSLIC + W +K
Sbjct: 7 PRKYNHPYDPYTIQIQLMNAVYDTISNDYKIGIFESPTGTGKTLSLICSSMTWLRHYK 64
>gi|313241207|emb|CBY33490.1| unnamed protein product [Oikopleura dioica]
Length = 761
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIEAKIKDLEISKNE 98
MK +Y +++ K GIFESPTGTGKSLS+IC +KW DH+ + E + ++ K E
Sbjct: 1 MKAIYTAIEDRKIGIFESPTGTGKSLSIICSAIKWLKDHR----NRAELGTQQPKVDKEE 56
Query: 99 TVSEDWIE 106
DW+E
Sbjct: 57 DGELDWLE 64
>gi|260946235|ref|XP_002617415.1| hypothetical protein CLUG_02859 [Clavispora lusitaniae ATCC
42720]
gi|238849269|gb|EEQ38733.1| hypothetical protein CLUG_02859 [Clavispora lusitaniae ATCC
42720]
Length = 825
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 13 NEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGIL 71
NE+ L + ++ P++ Y IQ+ M +Y T++N K G+FESPTGTGK+LS+IC +
Sbjct: 4 NERVTLWLMTRDYSHPYEPYKIQNELMDAIYETVNNGFKVGLFESPTGTGKTLSIICSTM 63
Query: 72 KWYYDHK 78
W D K
Sbjct: 64 TWLRDFK 70
>gi|320581727|gb|EFW95946.1| ATP-dependent RNA helicase Chl1, putative [Ogataea parapolymorpha
DL-1]
Length = 802
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKW 73
F P+ YD+Q M+ +Y TL N K GIFESPTGTGK+LS+IC + W
Sbjct: 11 FNHPYTPYDVQVKLMEAIYDTLTGNYKVGIFESPTGTGKTLSIICSTMTW 60
>gi|194383312|dbj|BAG64627.1| unnamed protein product [Homo sapiens]
Length = 288
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 27/38 (71%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
M LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 38
>gi|328853665|gb|EGG02802.1| hypothetical protein MELLADRAFT_38383 [Melampsora larici-populina
98AG31]
Length = 791
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 33 DIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYY-DHKIVGLEKIEAKIKD 91
DIQ FM++L+ ++ K GIFESPTGTGKSLS+IC L W + D + + E +
Sbjct: 3 DIQKEFMRHLFQAVEEHKVGIFESPTGTGKSLSIICSTLTWLHSDRRRLTEEAVATLTAK 62
Query: 92 LEISKNETVSEDWIEQQSFELKMR 115
L+ + DW+ +Q E K R
Sbjct: 63 LKADCPD--EPDWVLKQDIERKKR 84
>gi|71018229|ref|XP_759345.1| hypothetical protein UM03198.1 [Ustilago maydis 521]
gi|46099195|gb|EAK84428.1| hypothetical protein UM03198.1 [Ustilago maydis 521]
Length = 1496
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 24 EFPFPF-DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH---KI 79
+F FP+ +AY IQ + M+ ++ T+++ K G+FESPTGTGKSLSLIC W +
Sbjct: 24 QFHFPYAEAYSIQLDLMRKVFSTIEDGKVGLFESPTGTGKSLSLICAAFTWLRQNAQRHT 83
Query: 80 VGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQ 128
+G + + DW+ + EL+ R Q +A + LK +
Sbjct: 84 IGTSTNDGETHGSNHGPATQQEPDWVVKHKNELR-RKQHEAYELDLKDR 131
>gi|448514499|ref|XP_003867130.1| Chl1 protein [Candida orthopsilosis Co 90-125]
gi|380351468|emb|CCG21692.1| Chl1 protein [Candida orthopsilosis Co 90-125]
Length = 808
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 28 PFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYYDHK 78
PF YDIQ M +Y T++N K G+FESPTGTGK+LS+IC + W ++K
Sbjct: 26 PFTPYDIQVQLMDAIYDTIENGYKVGLFESPTGTGKTLSIICSTMTWLREYK 77
>gi|154308673|ref|XP_001553672.1| hypothetical protein BC1G_07759 [Botryotinia fuckeliana B05.10]
Length = 80
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 32/46 (69%)
Query: 28 PFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
P+ Y IQ FM+ ++ L+ K GI ESPTGTGKSLSLICG + W
Sbjct: 26 PYTPYPIQETFMQTVWEVLEEGKIGILESPTGTGKSLSLICGGVTW 71
>gi|50293497|ref|XP_449160.1| hypothetical protein [Candida glabrata CBS 138]
gi|74637307|sp|Q6FKT4.1|CHL1_CANGA RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|49528473|emb|CAG62130.1| unnamed protein product [Candida glabrata]
Length = 830
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYYDHK 78
++F P+ YDIQ + M+ +Y TL N K I ESPTGTGK+LSLIC L W D+K
Sbjct: 5 TKFHHPYSPYDIQLDLMQCVYDTLANPVKKVAIVESPTGTGKTLSLICSTLTWLRDNK 62
>gi|332232623|ref|XP_003265503.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 4
[Nomascus leucogenys]
Length = 880
Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 52/169 (30%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK----IEAKIKDLEI 94
M LY L+ K GIFESPTGTGKSLSLICG L W D + E+ +E L
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREEEARLLETGTGPLHD 60
Query: 95 SKNETV-----------------SEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIEN 137
K+E++ W+ Q + + R+ +D LK +K +E ++
Sbjct: 61 EKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKAEQARRKQREERLQQ 120
Query: 138 I--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERDGLE 184
+ R Q + K LR ++E + L M E +R E+ G E
Sbjct: 121 LQHRVQLKYAAKRLRQEEEEMENLLRLSREMLETGLGAERPEQLESGEE 169
>gi|293350107|ref|XP_001070646.2| PREDICTED: probable ATP-dependent RNA helicase DDX11 [Rattus
norvegicus]
Length = 845
Score = 62.8 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/43 (67%), Positives = 31/43 (72%)
Query: 34 IQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 22 IQKDFMAELYKVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|91080377|ref|XP_975038.1| PREDICTED: similar to fanconi anemia group J protein [Tribolium
castaneum]
Length = 750
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF YDIQ+ +M+ + L+N + GI ESPTGTGK+LSL+C L W
Sbjct: 13 FPFAPYDIQTKYMEKVIDCLENRQNGILESPTGTGKTLSLLCASLAW 59
>gi|428672406|gb|EKX73320.1| conserved hypothetical protein [Babesia equi]
Length = 822
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
+F PF+ Y Q FMK+ Y D S+FG+FESPTG+GK+++++ ++ W +++ GL
Sbjct: 11 DFNLPFEPYKHQLLFMKDAYECFDKSRFGLFESPTGSGKTIAILAAMIAWLNKNRVRGLM 70
Query: 84 KIEAKIKDLEISKNETVSEDWIEQQSFELK 113
+ K+ E + DW+ + + K
Sbjct: 71 R---KLDPNESQNADPSIPDWVRESAMAQK 97
>gi|119571197|gb|EAW50812.1| hCG1993153, isoform CRA_g [Homo sapiens]
Length = 431
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 27/38 (71%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
M LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 38
>gi|402080753|gb|EJT75898.1| DEAD_2 domain-containing protein [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 936
Score = 62.4 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYYDHKI-- 79
+F PF YD+Q FM +Y L + + + ESPTGTGKSLSLIC + W HK
Sbjct: 19 DFNHPFTPYDVQLEFMSTVYSVLQQGDGQVAVLESPTGTGKSLSLICACMTWLRRHKRAR 78
Query: 80 --VGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIEN 137
+ L ++KD DW+ +Q +R + D L + ++ + I
Sbjct: 79 FDLSLGDAATQLKD---------EPDWVVEQV----LRRKRDELAQRWQERERRLQQIRE 125
Query: 138 IRKQNE----KRKKSLRNDQEVKVH 158
K +E KR++ L +D+ + H
Sbjct: 126 KEKLDEQRAAKRRRMLDDDRPLPRH 150
>gi|406606908|emb|CCH41762.1| chromosome transmission fidelity protein 1 [Wickerhamomyces
ciferrii]
Length = 814
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYYDH 77
++ P+ YDIQ +FM + TL+ K GIFESPTGTGK+LSLIC + W H
Sbjct: 11 DYNHPYQPYDIQIDFMNAVNETLNGGYKIGIFESPTGTGKTLSLICSTVTWLRSH 65
>gi|157120352|ref|XP_001653621.1| regulator of telomere elongation helicase 1 rtel1 [Aedes aegypti]
gi|122117342|sp|Q16X92.1|RTEL1_AEDAE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|108875002|gb|EAT39227.1| AAEL008960-PA [Aedes aegypti]
Length = 1010
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIE 86
FPF+ Y +Q ++M + L NS G+ ESPTGTGK+LSL+C L W K +
Sbjct: 13 FPFEPYQVQRDYMSRVIECLQNSTNGVLESPTGTGKTLSLLCSSLAWVLHKKAQVQANMR 72
Query: 87 AKIKDLE 93
I DL+
Sbjct: 73 TNITDLK 79
>gi|51491862|ref|NP_001003919.1| probable ATP-dependent RNA helicase DDX11 [Mus musculus]
gi|81884425|sp|Q6AXC6.1|DDX11_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX11; AltName:
Full=DEAD/H box protein 11
gi|50926041|gb|AAH79656.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like
helicase homolog, S. cerevisiae) [Mus musculus]
Length = 880
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/43 (67%), Positives = 31/43 (72%)
Query: 34 IQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 22 IQKDFMAELYKVLEGGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|148706380|gb|EDL38327.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae), isoform CRA_a [Mus musculus]
Length = 942
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/43 (67%), Positives = 31/43 (72%)
Query: 34 IQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 58 IQKDFMAELYKVLEGGKIGIFESPTGTGKSLSLICGALSWLRD 100
>gi|452822263|gb|EME29284.1| putative DNA helicase required for mitotic chromosome segregation
CHL1 [Galdieria sulphuraria]
Length = 984
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
P +E FP++ Y +Q FM+ + +NS+ + ESPTGTGKSL+L+C +L W
Sbjct: 2 PFQVYGTEIEFPYEPYPVQFVFMEKILRACENSQNALLESPTGTGKSLALLCAVLAW 58
>gi|261327010|emb|CBH09985.1| helicase, putative [Trypanosoma brucei gambiense DAL972]
Length = 963
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
E FPF Y +Q +M+++ Y L S + ESPTGTGK+L L+CG+L W + +I
Sbjct: 10 EVSFPFAPYPVQEEYMRSVIYALKGSHNALLESPTGTGKTLCLLCGVLAWLDERRI 65
>gi|71026164|ref|XP_762768.1| DNA helicase [Theileria parva strain Muguga]
gi|68349720|gb|EAN30485.1| DNA helicase, putative [Theileria parva]
Length = 740
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 35 QSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIEAKIKDLEI 94
Q FMK+ Y D S FG+FESPTG+GK+LS++C L W +++ K LE
Sbjct: 5 QLIFMKDAYRCFDESLFGLFESPTGSGKTLSILCSALTWLKNNR----SKTMMCDIGLEP 60
Query: 95 SKNETVSEDWIEQQSFELKMRNQIDALKD 123
S++E V E W+ Q S K + D +KD
Sbjct: 61 SRDEEVPE-WVSQASLNHKKKMVEDVIKD 88
>gi|72386955|ref|XP_843902.1| helicase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62359030|gb|AAX79479.1| helicase, putative [Trypanosoma brucei]
gi|70800434|gb|AAZ10343.1| helicase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 963
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
E FPF Y +Q +M+++ Y L S + ESPTGTGK+L L+CG+L W + +I
Sbjct: 10 EVSFPFAPYPVQEEYMRSVIYALKGSHNALLESPTGTGKTLCLLCGVLAWLDERRI 65
>gi|195049134|ref|XP_001992658.1| GH24089 [Drosophila grimshawi]
gi|229891623|sp|B4JNS2.1|RTEL1_DROGR RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|193893499|gb|EDV92365.1| GH24089 [Drosophila grimshawi]
Length = 986
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + YD+Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYDVQRAYMEKVIICLRDGTNGVLESPTGTGKTLSLLCSTLGW 59
>gi|354492614|ref|XP_003508442.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Cricetulus griseus]
Length = 771
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/43 (67%), Positives = 31/43 (72%)
Query: 34 IQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 22 IQKDFMAELYKVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|119571194|gb|EAW50809.1| hCG1993153, isoform CRA_e [Homo sapiens]
Length = 463
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 27/38 (71%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
M LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 38
>gi|403215508|emb|CCK70007.1| hypothetical protein KNAG_0D02580 [Kazachstania naganishii CBS
8797]
Length = 832
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 10/65 (15%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNS----------KFGIFESPTGTGKSLSLICGILKWY 74
F PF+ YDIQ M+ +Y L ++ K GI ESPTGTGK+LSLIC L W
Sbjct: 5 FHHPFEPYDIQVELMQCIYDVLSSTASTNANVQRKKIGILESPTGTGKTLSLICASLSWL 64
Query: 75 YDHKI 79
D+K+
Sbjct: 65 RDNKL 69
>gi|145525869|ref|XP_001448751.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416306|emb|CAK81354.1| unnamed protein product [Paramecium tetraurelia]
Length = 913
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+E FP YD+Q +M+++ LD G+ ESPTGTGK+LSL+C + W + H+
Sbjct: 42 TEIYFPHKPYDVQVKYMESVVQILDKKCNGLLESPTGTGKTLSLLCSTMGWLHKHR 97
>gi|206558290|sp|A6ZWN8.1|CHL1_YEAS7 RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|151942784|gb|EDN61130.1| DEAH box protein [Saccharomyces cerevisiae YJM789]
Length = 861
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
F P+ YDIQ M+ +Y L + K I ESPTGTGK+LSLIC + W +K
Sbjct: 10 FYHPYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNKADIFT 69
Query: 84 KIEAKIKDLEISKNETVSE---DWIEQQSFELKMRNQIDALKD 123
++E IK E +E +S+ DW+ + ++ ++D L D
Sbjct: 70 RMETNIKTNE-DDSENLSDDEPDWVIDTYRKSVLQEKVDLLND 111
>gi|190407937|gb|EDV11202.1| deah box protein [Saccharomyces cerevisiae RM11-1a]
Length = 861
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
F P+ YDIQ M+ +Y L + K I ESPTGTGK+LSLIC + W +K
Sbjct: 10 FYHPYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNKADIFT 69
Query: 84 KIEAKIKDLEISKNETVSE---DWIEQQSFELKMRNQIDALKD 123
++E IK E +E +S+ DW+ + ++ ++D L D
Sbjct: 70 RMETNIKTNE-DDSENLSDDEPDWVIDTYRKSVLQEKVDLLND 111
>gi|6325249|ref|NP_015317.1| Chl1p [Saccharomyces cerevisiae S288c]
gi|116351|sp|P22516.1|CHL1_YEAST RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1; AltName: Full=Chromosome
transmission fidelity protein 1
gi|3538|emb|CAA39922.1| CHL1 [Saccharomyces cerevisiae]
gi|683782|emb|CAA88378.1| Chl1p [Saccharomyces cerevisiae]
gi|965085|gb|AAB68097.1| Chl1p: kinetochore protein in the DEAH box family [Saccharomyces
cerevisiae]
gi|1314068|emb|CAA95033.1| Chl1p [Saccharomyces cerevisiae]
gi|285815528|tpg|DAA11420.1| TPA: Chl1p [Saccharomyces cerevisiae S288c]
gi|392296003|gb|EIW07106.1| Chl1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 861
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
F P+ YDIQ M+ +Y L + K I ESPTGTGK+LSLIC + W +K
Sbjct: 10 FYHPYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNKADIFT 69
Query: 84 KIEAKIKDLEISKNETVSE---DWIEQQSFELKMRNQIDALKD 123
++E IK E +E +S+ DW+ + ++ ++D L D
Sbjct: 70 RMETNIKTNE-DDSENLSDDEPDWVIDTYRKSVLQEKVDLLND 111
>gi|207340439|gb|EDZ68787.1| YPL008Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270082|gb|EEU05324.1| Chl1p [Saccharomyces cerevisiae JAY291]
gi|259150146|emb|CAY86949.1| Chl1p [Saccharomyces cerevisiae EC1118]
Length = 861
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
F P+ YDIQ M+ +Y L + K I ESPTGTGK+LSLIC + W +K
Sbjct: 10 FYHPYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNKADIFT 69
Query: 84 KIEAKIKDLEISKNETVSE---DWIEQQSFELKMRNQIDALKD 123
++E IK E +E +S+ DW+ + ++ ++D L D
Sbjct: 70 RMETNIKTNE-DDSENLSDDEPDWVIDTYRKSVLQEKVDLLND 111
>gi|170034957|ref|XP_001845338.1| fanconi anemia group J protein [Culex quinquefasciatus]
gi|229891619|sp|B0W9F4.1|RTEL1_CULQU RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|167876796|gb|EDS40179.1| fanconi anemia group J protein [Culex quinquefasciatus]
Length = 978
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
FPF+ Y +Q ++M + L NS G+ ESPTGTGK+LSL+C L W K
Sbjct: 13 FPFEPYQVQRDYMARVIECLQNSSNGVLESPTGTGKTLSLLCSSLAWILHKK 64
>gi|349581808|dbj|GAA26965.1| K7_Chl1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 861
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
F P+ YDIQ M+ +Y L + K I ESPTGTGK+LSLIC + W +K
Sbjct: 10 FYHPYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNKADIFT 69
Query: 84 KIEAKIKDLEISKNETVSE---DWIEQQSFELKMRNQIDALKD 123
++E IK E +E +S+ DW+ + ++ ++D L D
Sbjct: 70 RMETNIKTNE-DDSENLSDDEPDWVIDTYRKSVLQEKVDLLND 111
>gi|302689377|ref|XP_003034368.1| hypothetical protein SCHCODRAFT_53201 [Schizophyllum commune
H4-8]
gi|300108063|gb|EFI99465.1| hypothetical protein SCHCODRAFT_53201 [Schizophyllum commune
H4-8]
Length = 869
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 22 PSEFP-FPF-DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
PSEFP FP+ Y IQ + M++LY L++ K I ESPTGTGK+LSL+ L W DH+
Sbjct: 14 PSEFPSFPYPQPYQIQLDLMRHLYEVLESKKISIVESPTGTGKTLSLLTASLTWLRDHQ 72
>gi|313233484|emb|CBY09656.1| unnamed protein product [Oikopleura dioica]
Length = 675
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
MK +Y +++ K GIFESPTGTGKSLS+IC +KW DH+
Sbjct: 1 MKAIYTAIEDRKIGIFESPTGTGKSLSIICSAIKWLKDHR 40
>gi|145512032|ref|XP_001441938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409199|emb|CAK74541.1| unnamed protein product [Paramecium tetraurelia]
Length = 927
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 15 QRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY 74
Q+ L+ +E FP YD+Q +M+++ +LD + ESPTGTGK+LSL+C L W
Sbjct: 45 QQTLSLAYTEIYFPHKPYDVQLKYMESVVQSLDRKHNALLESPTGTGKTLSLLCASLGWL 104
Query: 75 YDHK 78
H+
Sbjct: 105 SKHR 108
>gi|195131929|ref|XP_002010396.1| GI15901 [Drosophila mojavensis]
gi|229891624|sp|B4L1Z2.1|RTEL1_DROMO RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|193908846|gb|EDW07713.1| GI15901 [Drosophila mojavensis]
Length = 1014
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y++Q FM+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYEVQRAFMEKVIMCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>gi|195162511|ref|XP_002022098.1| GL14463 [Drosophila persimilis]
gi|229891625|sp|B4GU19.1|RTEL1_DROPE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194103996|gb|EDW26039.1| GL14463 [Drosophila persimilis]
Length = 1009
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y++Q ++M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYNVQRDYMEKVIICLRDGTNGVLESPTGTGKTLSLLCASLAW 59
>gi|195448955|ref|XP_002071885.1| GK24923 [Drosophila willistoni]
gi|229891630|sp|B4NDG5.1|RTEL1_DROWI RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194167970|gb|EDW82871.1| GK24923 [Drosophila willistoni]
Length = 998
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y++Q FM+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYEVQRAFMEKVIICLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>gi|198467617|ref|XP_001354453.2| GA17940 [Drosophila pseudoobscura pseudoobscura]
gi|229891755|sp|Q29FS3.2|RTEL1_DROPS RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|198149329|gb|EAL31506.2| GA17940 [Drosophila pseudoobscura pseudoobscura]
Length = 1009
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y++Q ++M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYNVQRDYMEKVIICLRDGTNGVLESPTGTGKTLSLLCASLAW 59
>gi|347964194|ref|XP_311162.5| AGAP000634-PA [Anopheles gambiae str. PEST]
gi|387912925|sp|Q7QEI1.5|RTEL1_ANOGA RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|333467418|gb|EAA06834.5| AGAP000634-PA [Anopheles gambiae str. PEST]
Length = 991
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
FPF+ Y++Q N+M + L N G+ ESPTGTGK+LSL+C + W K
Sbjct: 13 FPFEPYELQKNYMAKVIECLQNKTNGVLESPTGTGKTLSLLCSSMAWLLHMK 64
>gi|302802273|ref|XP_002982892.1| hypothetical protein SELMODRAFT_116951 [Selaginella
moellendorffii]
gi|300149482|gb|EFJ16137.1| hypothetical protein SELMODRAFT_116951 [Selaginella
moellendorffii]
Length = 852
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
EFP FPF Y IQ M+ +Y L+ I ESPTGTGK+LSLIC +L+W D
Sbjct: 5 EFPAFPFQPYAIQLQLMRAVYGALEKGGVAIVESPTGTGKTLSLICSVLQWLED 58
>gi|340931927|gb|EGS19460.1| hypothetical protein CTHT_0049210 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 918
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYYDHK 78
F P+ YD+Q FM+ +Y L+ + GI ESPTGTGKSLSLIC L W HK
Sbjct: 21 FHHPYTPYDVQLQFMRTVYNILEKGGGQVGILESPTGTGKSLSLICSALTWLRHHK 76
>gi|196008361|ref|XP_002114046.1| hypothetical protein TRIADDRAFT_27892 [Trichoplax adhaerens]
gi|190583065|gb|EDV23136.1| hypothetical protein TRIADDRAFT_27892 [Trichoplax adhaerens]
Length = 702
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FPF+ Y Q ++M N+ L K GI ESPTGTGK+L L+C L W
Sbjct: 10 EVDFPFNPYPCQLDYMTNVIQCLQEGKNGILESPTGTGKTLCLLCACLAW 59
>gi|365985379|ref|XP_003669522.1| hypothetical protein NDAI_0C06200 [Naumovozyma dairenensis CBS 421]
gi|343768290|emb|CCD24279.1| hypothetical protein NDAI_0C06200 [Naumovozyma dairenensis CBS 421]
Length = 851
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 23/152 (15%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD-NSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGL 82
+F P+ YDIQ MK +Y L+ + K I ESPTGTGK+LSLIC + W ++K L
Sbjct: 14 KFHHPYKPYDIQLQLMKCVYDVLNEDKKIAILESPTGTGKTLSLICATITWLRENKADYL 73
Query: 83 EKIEAKIKDLEISKNETVSED-------------WIEQQSFELKMRNQIDALK------D 123
I K I NE E W+ ++ +++++ LK D
Sbjct: 74 AGISKKT---TIDSNENTEEHATNDSDEEEDEPDWVNERYKNSILKDRLHLLKDYEDHLD 130
Query: 124 ALKSQKTYDELIENIRKQNEKRKKSLRNDQEV 155
LK +KT + I + K LR + +V
Sbjct: 131 HLKGKKTITKTASKINTNIIRPYKRLRKNTDV 162
>gi|238881932|gb|EEQ45570.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 841
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 28 PFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKW 73
P+ YDIQ M +Y T++N K G+FESPTGTGK+LS+IC + W
Sbjct: 13 PYTPYDIQIQLMDAIYNTIENGYKIGLFESPTGTGKTLSIICSSMTW 59
>gi|443915597|gb|ELU36981.1| CHL1 helicase [Rhizoctonia solani AG-1 IA]
Length = 803
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 14/93 (15%)
Query: 21 VPSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
P FP FPF YDIQ MK+LY L++ K GKSLSL+CG + W D+K
Sbjct: 9 TPESFPAFPFQPYDIQLELMKSLYTALEDRKI---------GKSLSLLCGAMTWLRDNK- 58
Query: 80 VGLEKIEAKIKDLEIS-KNETVSEDWIEQQSFE 111
I +++DL++S +++ W+ +Q +
Sbjct: 59 --QRAIRGELEDLKLSIQSDDAEPGWVSRQMLD 89
>gi|68472519|ref|XP_719578.1| hypothetical protein CaO19.9551 [Candida albicans SC5314]
gi|68472770|ref|XP_719450.1| hypothetical protein CaO19.2000 [Candida albicans SC5314]
gi|74586763|sp|Q5AD67.1|CHL1_CANAL RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|46441268|gb|EAL00566.1| hypothetical protein CaO19.2000 [Candida albicans SC5314]
gi|46441401|gb|EAL00698.1| hypothetical protein CaO19.9551 [Candida albicans SC5314]
Length = 842
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 28 PFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKW 73
P+ YDIQ M +Y T++N K G+FESPTGTGK+LS+IC + W
Sbjct: 13 PYTPYDIQIQLMDAIYNTIENGYKIGLFESPTGTGKTLSIICSSMTW 59
>gi|206558225|sp|A5DNW6.2|CHL1_PICGU RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|190348421|gb|EDK40869.2| hypothetical protein PGUG_04967 [Meyerozyma guilliermondii ATCC
6260]
Length = 825
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 28 PFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYYDHK 78
P+ YDIQ M +Y T+ N K G+FESPTGTGK+LS+IC + W ++K
Sbjct: 13 PYKPYDIQVQLMDAIYDTIQNKYKVGLFESPTGTGKTLSIICSSMTWLRNYK 64
>gi|223997568|ref|XP_002288457.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975565|gb|EED93893.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 746
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF YD+Q+ +MK++ L +S + ESPTGTGK+L L+C L W
Sbjct: 8 FPFRPYDVQTQYMKSVLNALQSSNHALLESPTGTGKTLCLLCSALAW 54
>gi|308499977|ref|XP_003112174.1| hypothetical protein CRE_29819 [Caenorhabditis remanei]
gi|308268655|gb|EFP12608.1| hypothetical protein CRE_29819 [Caenorhabditis remanei]
Length = 385
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIV------ 80
FPF+ Y+ Q FMKN+ LD ESPTGTGK+LSL+C L W K +
Sbjct: 23 FPFEPYECQRIFMKNVVDVLDRKLDAALESPTGTGKTLSLLCSTLAWVQKQKEIKPLDFS 82
Query: 81 --------GLEKIEAKIKDLEISK--NETVSEDWIEQQSFELKMRNQIDALKDALKSQKT 130
G EK E K+K+ I + + +EQ EL R + +K + +
Sbjct: 83 TWQSSGAGGAEKTEEKLKNSFIPTIFYASRTHSQLEQVVHELN-RTEYKWVKTTILGSRE 141
Query: 131 YDELIENIRKQNEKRKKSLRNDQEVKVHALTYRNRMD 167
+ + + ++K E ++S V A Y N+ D
Sbjct: 142 HFCINQKVKKIKESNRQSHVCRGLVSKRACHYYNKFD 178
>gi|146414083|ref|XP_001483012.1| hypothetical protein PGUG_04967 [Meyerozyma guilliermondii ATCC
6260]
Length = 825
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 28 PFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYYDHK 78
P+ YDIQ M +Y T+ N K G+FESPTGTGK+LS+IC + W ++K
Sbjct: 13 PYKPYDIQVQLMDAIYDTIQNKYKVGLFESPTGTGKTLSIICSSMTWLRNYK 64
>gi|24639946|ref|NP_572254.1| CG4078, isoform A [Drosophila melanogaster]
gi|442615242|ref|NP_001259262.1| CG4078, isoform B [Drosophila melanogaster]
gi|75027961|sp|Q9W484.1|RTEL1_DROME RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|7290625|gb|AAF46074.1| CG4078, isoform A [Drosophila melanogaster]
gi|60677863|gb|AAX33438.1| RE31401p [Drosophila melanogaster]
gi|220952186|gb|ACL88636.1| CG4078-PA [synthetic construct]
gi|440216460|gb|AGB95108.1| CG4078, isoform B [Drosophila melanogaster]
Length = 985
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y +Q +M+ + + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>gi|195340550|ref|XP_002036876.1| GM12432 [Drosophila sechellia]
gi|229891628|sp|B4I0K4.1|RTEL1_DROSE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194130992|gb|EDW53035.1| GM12432 [Drosophila sechellia]
Length = 966
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y +Q +M+ + + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>gi|313217856|emb|CBY41257.1| unnamed protein product [Oikopleura dioica]
Length = 103
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
MK +Y +++ K GIFESPTGTGKSLS+IC +KW DH+
Sbjct: 1 MKAIYTAIEDRKIGIFESPTGTGKSLSIICSAIKWLKDHR 40
>gi|241950739|ref|XP_002418092.1| ATP-dependent RNA helicase Chl1, putative [Candida dubliniensis
CD36]
gi|223641431|emb|CAX43392.1| ATP-dependent RNA helicase Chl1, putative [Candida dubliniensis
CD36]
Length = 823
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 28 PFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYYDHK 78
P+ YDIQ M +Y T++N K G+FESPTGTGK+LS+IC + W + K
Sbjct: 13 PYTPYDIQIQLMDAIYDTIENGYKIGLFESPTGTGKTLSIICSSMTWLRNFK 64
>gi|312379509|gb|EFR25759.1| hypothetical protein AND_08621 [Anopheles darlingi]
Length = 972
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+ VP +FPF + Y +Q ++M L L S G+ ESPTGTGK+LS++C L W
Sbjct: 6 IGGVPVDFPF--EPYQVQRDYMSKLLQCLQQSTNGLLESPTGTGKTLSILCASLAW 59
>gi|302818654|ref|XP_002991000.1| hypothetical protein SELMODRAFT_132642 [Selaginella
moellendorffii]
gi|300141331|gb|EFJ08044.1| hypothetical protein SELMODRAFT_132642 [Selaginella
moellendorffii]
Length = 834
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
+FP FPF Y IQ M+ +Y L+ I ESPTGTGK+LSLIC +L+W D
Sbjct: 5 QFPAFPFQPYAIQLQLMRAVYGALEKGGVAIVESPTGTGKTLSLICSVLQWLED 58
>gi|195396523|ref|XP_002056881.1| GJ16649 [Drosophila virilis]
gi|229891629|sp|B4M891.1|RTEL1_DROVI RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194146648|gb|EDW62367.1| GJ16649 [Drosophila virilis]
Length = 1005
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y++Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYEVQRAYMEKVIMCLRDGTNGVLESPTGTGKTLSLLCASLAW 59
>gi|164657658|ref|XP_001729955.1| hypothetical protein MGL_2941 [Malassezia globosa CBS 7966]
gi|159103849|gb|EDP42741.1| hypothetical protein MGL_2941 [Malassezia globosa CBS 7966]
Length = 891
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+P AY IQ + M L+ T++ K G+FESPTGTGK+LSL+C L W
Sbjct: 31 FPYP-TAYRIQLDLMSALFDTIEQGKAGVFESPTGTGKTLSLLCSALTW 78
>gi|119608986|gb|EAW88580.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae), isoform CRA_e [Homo sapiens]
Length = 657
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 23/169 (13%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK----IEAKIKDLEI 94
M LY L+ K GIFESPTGTGKSLSLICG L W D + E+ +E L
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREEEARLLETGTGPLHD 60
Query: 95 SKNETV-----------------SEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIEN 137
K+E++ W+ Q + + R+ ++ LK +K +E ++
Sbjct: 61 EKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVNRLKAEQARRKQREERLQQ 120
Query: 138 I--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERDGLE 184
+ R Q + K LR ++E + L M E + +R E+ G E
Sbjct: 121 LQHRVQLKYAAKRLRQEEEETENLLRLSREMLETGPEAERLEQLESGEE 169
>gi|195420015|ref|XP_002060745.1| GK24076 [Drosophila willistoni]
gi|195441759|ref|XP_002068656.1| GK23573 [Drosophila willistoni]
gi|194156830|gb|EDW71731.1| GK24076 [Drosophila willistoni]
gi|194164741|gb|EDW79642.1| GK23573 [Drosophila willistoni]
Length = 216
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y++Q FM+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYEVQRAFMEKVIICLRDGTNGVLESPTGTGKTLSLLCLSLAW 59
>gi|414881660|tpg|DAA58791.1| TPA: hypothetical protein ZEAMMB73_410850, partial [Zea mays]
Length = 941
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFDAYD Q +M + +L K + ESPTGTGK+L L+C L W
Sbjct: 13 FPFDAYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAW 59
>gi|392862459|gb|EAS36901.2| ATP-dependent RNA helicase CHL1 [Coccidioides immitis RS]
Length = 908
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 44/110 (40%), Gaps = 48/110 (43%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT------------------------ 60
F P+ YDIQ FM++LY ++ K GIFESPTGT
Sbjct: 8 FYHPYSPYDIQVQFMRSLYTCIEECKVGIFESPTGTVSILTPEGCSMGFFSLRSDAPEEN 67
Query: 61 -----------------------GKSLSLICGILKWYYDHK-IVGLEKIE 86
GKSLSLICG L W DHK V LE IE
Sbjct: 68 AADPEWDPMFFNQFASIPKEIRQGKSLSLICGSLTWLRDHKRSVFLEDIE 117
>gi|17506821|ref|NP_492769.1| Protein RTEL-1 [Caenorhabditis elegans]
gi|75018688|sp|Q93575.3|RTEL1_CAEEL RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|3876338|emb|CAB02102.1| Protein RTEL-1 [Caenorhabditis elegans]
Length = 994
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y+ Q FMKN+ LD ESPTGTGK+LSL+C L W
Sbjct: 21 FPFEPYECQRIFMKNVVDVLDRKLDAALESPTGTGKTLSLLCSTLAW 67
>gi|340052773|emb|CCC47058.1| putative helicase [Trypanosoma vivax Y486]
Length = 968
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FPFD Y Q +M+ + LDN+ + ESPTGTGK+L L+C +L W
Sbjct: 10 EISFPFDPYPAQVEYMQAVMDALDNAANALLESPTGTGKTLCLLCAVLAW 59
>gi|345490538|ref|XP_001606129.2| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Nasonia vitripennis]
Length = 1111
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y +Q ++MK + L K G+ ESPTGTGK+LSL+C L W
Sbjct: 13 FPFKPYQVQEDYMKKVIECLQEGKNGVLESPTGTGKTLSLLCSSLGW 59
>gi|390361889|ref|XP_003730027.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Strongylocentrotus purpuratus]
Length = 466
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
FPF+ Y Q ++M+ + L SK G+ ESPTGTGK+L L+C L W + +
Sbjct: 13 FPFEPYPCQKDYMRKVIQCLQMSKNGVLESPTGTGKTLCLLCSTLAWRHTY 63
>gi|182705254|sp|Q92771.3|DDX12_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DDX12; AltName:
Full=CHL1-related protein 2; Short=hCHLR2; AltName:
Full=DEAD/H box protein 12
Length = 950
Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/42 (64%), Positives = 30/42 (71%)
Query: 35 QSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
+ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 42 KEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 83
>gi|242057873|ref|XP_002458082.1| hypothetical protein SORBIDRAFT_03g026670 [Sorghum bicolor]
gi|241930057|gb|EES03202.1| hypothetical protein SORBIDRAFT_03g026670 [Sorghum bicolor]
Length = 759
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFDAYD Q +M + +L K + ESPTGTGK+L L+C L W
Sbjct: 13 FPFDAYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAW 59
>gi|321469304|gb|EFX80285.1| hypothetical protein DAPPUDRAFT_128417 [Daphnia pulex]
Length = 892
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
L VP EFPF YD+Q FM+ + L G+ ESPTGTGK+L L+C L W
Sbjct: 6 LNNVPIEFPF--QPYDVQEKFMERVIECLQKGVNGLLESPTGTGKTLCLLCSTLGWLATR 63
Query: 78 K 78
K
Sbjct: 64 K 64
>gi|414881659|tpg|DAA58790.1| TPA: regulator of telomere elongation helicase 1 [Zea mays]
Length = 619
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFDAYD Q +M + +L K + ESPTGTGK+L L+C L W
Sbjct: 13 FPFDAYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAW 59
>gi|341883785|gb|EGT39720.1| hypothetical protein CAEBREN_25454 [Caenorhabditis brenneri]
Length = 810
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y+ Q FMKN+ LD+ ESPTGTGK+LSL+C L W
Sbjct: 24 FPFEPYECQRIFMKNVIDVLDSKLDAALESPTGTGKTLSLLCSTLAW 70
>gi|238013860|gb|ACR37965.1| unknown [Zea mays]
Length = 274
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFDAYD Q +M + +L K + ESPTGTGK+L L+C L W
Sbjct: 13 FPFDAYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAW 59
>gi|226494081|ref|NP_001152397.1| regulator of telomere elongation helicase 1 [Zea mays]
gi|195655863|gb|ACG47399.1| regulator of telomere elongation helicase 1 [Zea mays]
Length = 619
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFDAYD Q +M + +L K + ESPTGTGK+L L+C L W
Sbjct: 13 FPFDAYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAW 59
>gi|397614354|gb|EJK62748.1| hypothetical protein THAOC_16627, partial [Thalassiosira oceanica]
Length = 1353
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 5/133 (3%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK---IVGLE 83
FPF Y++Q +M ++ L S+ + ESPTGTGK+L L+C L W K V LE
Sbjct: 52 FPFQPYNVQHQYMSSVITALQASQHALLESPTGTGKTLCLLCSALAWQIREKSRMSVELE 111
Query: 84 KIEAK--IKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQ 141
I+++ K E++ S+D ++ S R + + A ++ +++ +R
Sbjct: 112 GIQSQQEGKTDELAPGPDQSQDGSDEFSNHSVPRKKAPVIIYASRTHSQLSQVMGELRNT 171
Query: 142 NEKRKKSLRNDQE 154
+ K S+ +E
Sbjct: 172 RYRPKHSILGSRE 184
>gi|367011419|ref|XP_003680210.1| hypothetical protein TDEL_0C01100 [Torulaspora delbrueckii]
gi|359747869|emb|CCE90999.1| hypothetical protein TDEL_0C01100 [Torulaspora delbrueckii]
Length = 815
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLD-NSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
F P++ Y IQ M+ +Y TL K I ESPTGTGK+LSLIC ++ W +K +
Sbjct: 6 FNHPYEPYGIQLELMQCIYDTLSLGKKLAILESPTGTGKTLSLICSVVTWLRQNKADLVA 65
Query: 84 KIEAKIKDLEISKNETVSEDWI 105
+ L S+++ DW+
Sbjct: 66 SGGHNVGGLSGSESDDDEPDWV 87
>gi|301111400|ref|XP_002904779.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095109|gb|EEY53161.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1058
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+ +P EFPFP YD Q +M+ + L + + I ESPTGTGK+L L+C L W
Sbjct: 6 ICGIPVEFPFP--PYDSQLIYMEKVLLALTSKQNAILESPTGTGKTLCLLCATLAW 59
>gi|389744669|gb|EIM85851.1| DNA repair helicase [Stereum hirsutum FP-91666 SS1]
Length = 875
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 22 PSEFP-FPF-DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
P FP FP+ + Y+IQ + M++LY ++ K I ESPTGTGK+LSL+ W D+K
Sbjct: 19 PDTFPIFPYPEPYNIQLDLMRHLYAAIEGRKVAIVESPTGTGKTLSLLSATFTWLDDNK 77
>gi|391338586|ref|XP_003743639.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 homolog [Metaseiulus occidentalis]
Length = 1132
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 7 NEDKEFNEQRPLAEVPSE---------FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESP 57
+ED + +E P++ P FPF+ Y++Q ++M + L G+ ESP
Sbjct: 2 SEDGDPDEDAPVSSKPRSALVEIRMVNISFPFEPYELQKDYMSAVLECLQKGWNGLLESP 61
Query: 58 TGTGKSLSLICGILKWYYDHK 78
TGTGK+LSL+C L W D K
Sbjct: 62 TGTGKTLSLLCSSLAWLEDRK 82
>gi|322694417|gb|EFY86247.1| DEAD-2 domain-containing protein [Metarhizium acridum CQMa 102]
Length = 891
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 37/159 (23%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGT-GKSLSLICGILKWYYDHKIV 80
+F P+ Y +Q FM+ +Y LD + GI ESPTGT GKSLSLIC L W + K
Sbjct: 20 DFHHPYTPYAVQEQFMRTVYDILDKGEGQVGILESPTGTKGKSLSLICASLTWLRNFK-- 77
Query: 81 GLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRK 140
E+ M+N DA KD + D+L+ R+
Sbjct: 78 --------------------------SNKLEVSMQNAGDAYKD--EPAWLVDQLLRRKRE 109
Query: 141 QNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEE 179
+ +R + D+E ++ A+ + + E +++R+ EE
Sbjct: 110 ELVQRWE----DREKRLEAIRLKEKALEDRGRKRRRLEE 144
>gi|268566755|ref|XP_002639805.1| C. briggsae CBR-BCH-1 protein [Caenorhabditis briggsae]
gi|229891627|sp|A8WS58.1|RTEL1_CAEBR RecName: Full=Regulator of telomere elongation helicase 1 homolog
Length = 994
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y+ Q FMKN+ LD ESPTGTGK+LSL+C L W
Sbjct: 21 FPFEPYECQRIFMKNVIDVLDMKLDAALESPTGTGKTLSLLCSTLAW 67
>gi|194764312|ref|XP_001964274.1| GF20802 [Drosophila ananassae]
gi|229891621|sp|B3MSG8.1|RTEL1_DROAN RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|190619199|gb|EDV34723.1| GF20802 [Drosophila ananassae]
Length = 994
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y +Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYPVQRAYMEKVIQCLKDGTNGVLESPTGTGKTLSLLCSSLAW 59
>gi|119608987|gb|EAW88581.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like
helicase homolog, S. cerevisiae), isoform CRA_f [Homo
sapiens]
Length = 218
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 27/38 (71%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
M LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 38
>gi|339239905|ref|XP_003375878.1| DNA repair helicase family protein [Trichinella spiralis]
gi|316975433|gb|EFV58877.1| DNA repair helicase family protein [Trichinella spiralis]
Length = 810
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 16/111 (14%)
Query: 50 KFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIEAKIKDLEISKNETVSEDWIEQQS 109
K GIFESPTGTGKSLSL+CG L W + +E++E +++ ET E+W+E+
Sbjct: 42 KIGIFESPTGTGKSLSLLCGSLTWLKRRRNNYIEELERTVEEKTKIIKETALENWLEE-- 99
Query: 110 FELKMRNQIDALKDALKSQKTYDEL---IENIRKQNEKRKKSLRNDQEVKV 157
F+LK ++QK+ DE ++ IR+ E+ + N +E+ +
Sbjct: 100 FDLKA-----------EAQKSLDEAKIEVDQIRRVQERLSEVKSNVEELLI 139
>gi|410076050|ref|XP_003955607.1| hypothetical protein KAFR_0B01730 [Kazachstania africana CBS
2517]
gi|372462190|emb|CCF56472.1| hypothetical protein KAFR_0B01730 [Kazachstania africana CBS
2517]
Length = 809
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 19 AEVPSEFPFPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYYD 76
+E F PF YDIQ M+ +Y TL + K I ESPTGTGK+LSLIC + W +
Sbjct: 6 SESRGNFNHPFKPYDIQLELMQCIYDTLSDKTKKIAILESPTGTGKTLSLICSTITWLRE 65
Query: 77 HK 78
+K
Sbjct: 66 NK 67
>gi|195470104|ref|XP_002099973.1| GE16425 [Drosophila yakuba]
gi|229891631|sp|B4PZB4.1|RTEL1_DROYA RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194187497|gb|EDX01081.1| GE16425 [Drosophila yakuba]
Length = 985
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y +Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>gi|76155593|gb|AAX26884.2| SJCHGC09335 protein [Schistosoma japonicum]
Length = 412
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FP+ YD Q +M + +L+ K I ESPTGTGK+L L+C L W
Sbjct: 10 EIDFPYQPYDCQLEYMTKVLLSLNQGKHAILESPTGTGKTLCLLCASLAW 59
>gi|159487905|ref|XP_001701963.1| predicted protein [Chlamydomonas reinhardtii]
gi|158281182|gb|EDP06938.1| predicted protein [Chlamydomonas reinhardtii]
Length = 54
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P EFPF D Y Q +FM+++ L K + ESPTGTGK+L L+C L W
Sbjct: 1 IAGIPVEFPF--DPYPCQRDFMESVIKALQQGKNALLESPTGTGKTLCLLCSTLAW 54
>gi|194888991|ref|XP_001977003.1| GG18780 [Drosophila erecta]
gi|229891622|sp|B3NSW1.1|RTEL1_DROER RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|190648652|gb|EDV45930.1| GG18780 [Drosophila erecta]
Length = 985
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y +Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>gi|156083254|ref|XP_001609111.1| DNA repair helicase (rad3) and DEAD_2 domain containing protein
[Babesia bovis T2Bo]
gi|154796361|gb|EDO05543.1| DNA repair helicase (rad3) and DEAD_2 domain containing protein
[Babesia bovis]
Length = 775
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
F PF+ Y Q M + Y ++ S FG+FESPTG+GK+++++C L W +++I
Sbjct: 9 FSLPFEPYPSQKRLMHDSYRCIEESDFGLFESPTGSGKTIAMLCSALTWLDENRI 63
>gi|365757958|gb|EHM99827.1| Chl1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 861
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKW 73
F P++ YDIQ M+ +Y L + K I ESPTGTGK+LSLIC + W
Sbjct: 10 FYHPYEPYDIQIQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTW 59
>gi|47224139|emb|CAG13059.1| unnamed protein product [Tetraodon nigroviridis]
Length = 662
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/38 (63%), Positives = 28/38 (73%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
+EFPFP+ YDIQ FM+ LY +D K GIFESPTGT
Sbjct: 6 TEFPFPYQPYDIQQQFMQALYSAVDQGKVGIFESPTGT 43
>gi|353232615|emb|CCD79969.1| putative regulator of telomere elongation helicase 1 rtel1
[Schistosoma mansoni]
Length = 1165
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FP+ YD Q +M + +L+ K I ESPTGTGK+L L+C L W
Sbjct: 10 EIDFPYQPYDCQFEYMTKVLLSLNEGKHAILESPTGTGKTLCLLCASLAW 59
>gi|449019202|dbj|BAM82604.1| probable DNA helicase required for mitotic chromosome segregation
CHL1 [Cyanidioschyzon merolae strain 10D]
Length = 1020
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+P Y Q M+ +Y T+D G+FESPTGTGK+LSL+C L W
Sbjct: 159 FPYP-QPYGTQLELMRAVYETIDRGGIGVFESPTGTGKTLSLLCAALTW 206
>gi|432960238|ref|XP_004086424.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Oryzias latipes]
Length = 1167
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
L V +FPFP YD Q ++M + L G+ ESPTGTGK+L L+C L W
Sbjct: 6 LHGVTVDFPFP--PYDCQKDYMAKVLQCLQQKVNGVLESPTGTGKTLCLLCATLAWREHF 63
Query: 78 K-IVGLEKIEAKIKDLEISKNETVSEDW 104
+ + KI ++K + N T++ W
Sbjct: 64 RDTISACKIAERLKGENMFPNTTLAS-W 90
>gi|198421637|ref|XP_002120480.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 1008
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
FPF AY++Q ++M + L+ + ESPTGTGK+L L+C L W H
Sbjct: 13 FPFTAYEVQKSYMTKVIQALNTHQNAALESPTGTGKTLCLLCSTLAWRRQH 63
>gi|452820691|gb|EME27730.1| DNA excision repair protein ERCC-2 [Galdieria sulphuraria]
Length = 777
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A + E FPF Y +Q ++M+ + L S+ + ESPTGTGK+L L+C L W
Sbjct: 2 VAILGVEVAFPFQPYPVQRDYMEKVIQALQTSQHAMLESPTGTGKTLCLLCSTLAW 57
>gi|320591639|gb|EFX04078.1| dead domain containing protein [Grosmannia clavigera kw1407]
Length = 911
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLY--YTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+F P+ YD+Q +FM+ +Y + I ESPTGTGKSLSLICG L W
Sbjct: 34 KFHHPYTPYDVQMDFMRAVYDACATGGGQVAILESPTGTGKSLSLICGALTW 85
>gi|224054204|ref|XP_002298143.1| predicted protein [Populus trichocarpa]
gi|222845401|gb|EEE82948.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+AYD Q +M+ + +L N + ESPTGTGK+L L+C L W
Sbjct: 14 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 60
>gi|123491434|ref|XP_001325843.1| helicase [Trichomonas vaginalis G3]
gi|121908748|gb|EAY13620.1| helicase, putative [Trichomonas vaginalis G3]
Length = 747
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ Y +Q +M + + D + I ESPTGTGK+LSL+C +L W
Sbjct: 12 FPYKPYPLQETYMSKVIESCDTGNYAILESPTGTGKTLSLLCSVLSW 58
>gi|357622566|gb|EHJ73993.1| fanconi anemia group J protein [Danaus plexippus]
Length = 950
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y++Q ++M+ + +L N+ + ESPTGTGK+LSL+C L W
Sbjct: 13 FPFEPYEVQKSYMEKVIESLQNNTNAVLESPTGTGKTLSLLCSSLAW 59
>gi|67623207|ref|XP_667886.1| helicase [Cryptosporidium hominis TU502]
gi|54659060|gb|EAL37657.1| helicase, belonging to UvrD family [Cryptosporidium hominis]
Length = 1100
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 26 PFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
PFP+DAY Q N+M+ + Y+L K + ESPTGTGK+L L+ L +
Sbjct: 16 PFPYDAYKCQINYMQKILYSLKYKKHALLESPTGTGKTLCLLASTLAF 63
>gi|118387755|ref|XP_001026980.1| DNA repair helicase (rad3) [Tetrahymena thermophila]
gi|89308750|gb|EAS06738.1| DNA repair helicase (rad3) [Tetrahymena thermophila SB210]
Length = 1433
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y IQ ++M+++ L++ + +SPTGTGK+LSL+C L W
Sbjct: 55 FPFKPYQIQEDYMRSIVEALNSKSNALLQSPTGTGKTLSLLCACLGW 101
>gi|256075476|ref|XP_002574045.1| regulator of telomere elongation helicase 1 rtel1 [Schistosoma
mansoni]
Length = 1120
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FP+ YD Q +M + +L+ K I ESPTGTGK+L L+C L W
Sbjct: 10 EIDFPYQPYDCQFEYMTKVLLSLNEGKHAILESPTGTGKTLCLLCASLAW 59
>gi|32398845|emb|CAD98555.1| similar to helicase-like protein nhl, possible [Cryptosporidium
parvum]
Length = 1100
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 26 PFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
PFP+DAY Q N+M+ + Y+L K + ESPTGTGK+L L+ L +
Sbjct: 16 PFPYDAYKCQINYMQKILYSLKYKKHALLESPTGTGKTLCLLASTLAF 63
>gi|255084633|ref|XP_002508891.1| predicted protein [Micromonas sp. RCC299]
gi|226524168|gb|ACO70149.1| predicted protein [Micromonas sp. RCC299]
Length = 915
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
M+ LY TL+ G+FESPTGTGK+LS++C L+W DH+
Sbjct: 1 MRGLYRTLERGGIGVFESPTGTGKTLSVLCSALQWLEDHR 40
>gi|66475604|ref|XP_627618.1| DNA repair helicase [Cryptosporidium parvum Iowa II]
gi|46229294|gb|EAK90143.1| DNA repair helicase [Cryptosporidium parvum Iowa II]
Length = 1108
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 26 PFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
PFP+DAY Q N+M+ + Y+L K + ESPTGTGK+L L+ L +
Sbjct: 24 PFPYDAYKCQINYMQKILYSLKYKKHALLESPTGTGKTLCLLASTLAF 71
>gi|363741498|ref|XP_417435.3| PREDICTED: regulator of telomere elongation helicase 1 [Gallus
gallus]
Length = 1220
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK-IVGLEKI 85
FPF Y+ Q +M + L GI ESPTGTGK+L L+C L W K + KI
Sbjct: 13 FPFQPYECQETYMAKVLECLQTKVNGILESPTGTGKTLCLLCSTLAWREHFKDTISARKI 72
Query: 86 EAKIKDLEISKNETVSEDW 104
++ +E+ + +S W
Sbjct: 73 AQRMNGVELFPDRPMS-SW 90
>gi|449448190|ref|XP_004141849.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Cucumis sativus]
Length = 1054
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFDAYD Q +M+ + +L + ESPTGTGK+L L+C L W
Sbjct: 13 FPFDAYDCQLVYMEKVIQSLQEKCNALLESPTGTGKTLCLLCATLAW 59
>gi|429854790|gb|ELA29777.1| ATP-dependent RNA helicase chl1 [Colletotrichum gloeosporioides
Nara gc5]
Length = 858
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 75/158 (47%), Gaps = 27/158 (17%)
Query: 39 MKNLYYTL--DNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIEAKIK-DLEIS 95
MK Y L N + GI ESPTGTGKSLSLIC L W + +I E+ EA +K +++
Sbjct: 1 MKTAYSVLQAGNGQVGILESPTGTGKSLSLICASLTWLRNQRI---EEHEASLKVNMDDF 57
Query: 96 KNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNEKRKKSLRNDQEV 155
++E DWI +Q ++ DEL N ++ EKR + +R ++V
Sbjct: 58 RDE---PDWIVEQML-----------------RRKRDELARNW-EEREKRLEQIRLKEKV 96
Query: 156 KVHALTYRNRMDEKNSKEKRKEEERDGLENETQELDES 193
R R DE SK K + + E E DES
Sbjct: 97 LEIRSAKRRRFDEGPSKSKARNDADADDEWLLDEADES 134
>gi|432091451|gb|ELK24533.1| Putative ATP-dependent RNA helicase DDX11-like protein 8 [Myotis
davidii]
Length = 872
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 63/138 (45%), Gaps = 31/138 (22%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT---GKSLSLICGILKWYYDHKIVG 81
FPFPF Y IQ +FM LY LD+ K GIFESPTGT GK
Sbjct: 13 FPFPFTPYSIQKDFMTVLYQVLDDGKIGIFESPTGTVNDGKDQPPC-------------- 58
Query: 82 LEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQ 141
I + ++ + T DW+ Q + + R+ +D LK K Q RK+
Sbjct: 59 ---ISSSRQETPDTLGPTGEPDWVTQFVQKKEERDLVDRLK---KEQMR--------RKK 104
Query: 142 NEKRKKSLRNDQEVKVHA 159
E+R + LR++ ++K A
Sbjct: 105 REERLQQLRHNTQLKYAA 122
>gi|29841033|gb|AAP06046.1| similar to GenBank Accession Number BC000673 helicase-like
protein NHL in Homo sapiens [Schistosoma japonicum]
Length = 75
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FP+ YD Q +M + +L+ K I ESPTGTGK+L L+C L W
Sbjct: 10 EIDFPYQPYDCQLEYMTKVLLSLNQGKHAILESPTGTGKTLCLLCASLAW 59
>gi|326470360|gb|EGD94369.1| DNA repair helicase (rad3) [Trichophyton tonsurans CBS 112818]
Length = 847
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 26/127 (20%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK-IVGL 82
+F P+ YDIQ+ FM+ LY +++ G GKSLSLICG L W DHK V L
Sbjct: 4 DFRHPYRPYDIQAQFMEALYGCIED----------GGGKSLSLICGSLAWLRDHKRSVFL 53
Query: 83 EKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQN 142
EK + D E DW+ Q + + R Q + L +K +E + +R+
Sbjct: 54 EKADDDGDDGE--------PDWMVQHA--RRERTQ-----EMLARRKELEERLARVREAE 98
Query: 143 EKRKKSL 149
E+ +K L
Sbjct: 99 ERHRKKL 105
>gi|389594205|ref|XP_003722349.1| putative helicase [Leishmania major strain Friedlin]
gi|321438847|emb|CBZ12607.1| putative helicase [Leishmania major strain Friedlin]
Length = 953
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFD Y Q FM+++ L N G+ ESPTGTGK+L L+C L W
Sbjct: 14 FPFDPYPAQVEFMRSVVKCLQNGFNGLLESPTGTGKTLCLLCSTLGW 60
>gi|410898938|ref|XP_003962954.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Takifugu rubripes]
Length = 1074
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF YD Q ++M + L G+ ESPTGTGK+L L+C L W
Sbjct: 13 FPFTPYDCQKDYMTKVIECLQKRNNGVLESPTGTGKTLCLLCATLAW 59
>gi|326478541|gb|EGE02551.1| DNA helicase [Trichophyton equinum CBS 127.97]
Length = 850
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 61/128 (47%), Gaps = 25/128 (19%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT-GKSLSLICGILKWYYDHK-IVG 81
+F P+ YDIQ+ FM+ LY G E G GKSLSLICG L W DHK V
Sbjct: 4 DFRHPYRPYDIQAQFMEALY--------GCIEDGGGRYGKSLSLICGSLAWLRDHKRSVF 55
Query: 82 LEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQ 141
LEK + D E DW+ Q + + R Q D L +K +E + +R+
Sbjct: 56 LEKADDDGDDGE--------PDWMVQHA--RRERTQ-----DMLARRKELEERLGRVREA 100
Query: 142 NEKRKKSL 149
E+ +K L
Sbjct: 101 EERHRKKL 108
>gi|393212456|gb|EJC97956.1| DNA repair helicase [Fomitiporia mediterranea MF3/22]
Length = 863
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 18 LAEVPSEF-PFPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYY 75
L +P EF FP++A Y IQ + M++LY ++ K + ESPTGTGK+LSL+ L W +
Sbjct: 6 LLAIPEEFRAFPYNAPYKIQIDLMQHLYEAIERRKLAVVESPTGTGKTLSLLTSSLTWLH 65
Query: 76 DHKIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQI 118
DHK K ++ L S + DW+ Q+ + +M+ +I
Sbjct: 66 DHKD---RKKRITLESLRGSLDSADDPDWVITQTLD-RMKAKI 104
>gi|403361814|gb|EJY80616.1| hypothetical protein OXYTRI_21994 [Oxytricha trifallax]
Length = 957
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 29/50 (58%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FPF Y Q NFM L +L + ESPTGTGK+LSL+C L W
Sbjct: 44 EVMFPFKPYQCQINFMAKLINSLKLGDNALLESPTGTGKTLSLLCASLAW 93
>gi|449486421|ref|XP_002193824.2| PREDICTED: regulator of telomere elongation helicase 1 [Taeniopygia
guttata]
Length = 1107
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK-IVGLEKI 85
FPF Y Q +M + L GI ESPTGTGK+L L+C L W K + KI
Sbjct: 13 FPFQPYPCQEAYMAKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWREHFKDTISARKI 72
Query: 86 EAKIKDLEISKNETVSEDW 104
++ +E+ + VS W
Sbjct: 73 AQRMNGVELFPDRPVS-SW 90
>gi|449529467|ref|XP_004171721.1| PREDICTED: regulator of telomere elongation helicase 1-like,
partial [Cucumis sativus]
Length = 695
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFDAYD Q +M+ + +L + ESPTGTGK+L L+C L W
Sbjct: 13 FPFDAYDCQLVYMEKVIQSLQEKCNALLESPTGTGKTLCLLCATLAW 59
>gi|209876510|ref|XP_002139697.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
gi|209555303|gb|EEA05348.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
Length = 812
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDN-SKFGIFESPTGTGKSLSLICGILKWYYDH 77
+F FPF Y IQ F + + N GIFESPTGTGKS+S +C L W H
Sbjct: 7 KFGFPFTPYKIQEQFCRKAWDLFSNPGSIGIFESPTGTGKSISALCSALSWINTH 61
>gi|449674929|ref|XP_002168371.2| PREDICTED: Fanconi anemia group J protein-like [Hydra
magnipapillata]
Length = 181
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
FP AY Q + M + ++ + + ESPTG+GKSL+L+C L W Y+ K
Sbjct: 36 FPVKAYPTQISLMSKILQSIQKRQCCLLESPTGSGKSLALLCATLAWLYEEK 87
>gi|326430720|gb|EGD76290.1| hypothetical protein PTSG_00993 [Salpingoeca sp. ATCC 50818]
Length = 871
Score = 56.2 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 32 YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIEAKIKD 91
YDIQ + M+ LY + G+F+SPTGTGKSLS++C ++W D L++ E + D
Sbjct: 26 YDIQRDMMRQLYCCFEAGGLGVFQSPTGTGKSLSVLCSAMQWLRDD----LQQTEKDLLD 81
Query: 92 LEISK 96
+S+
Sbjct: 82 QNVSE 86
>gi|340385001|ref|XP_003390999.1| PREDICTED: regulator of telomere elongation helicase 1-like,
partial [Amphimedon queenslandica]
Length = 466
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M+ + L N+ I ESPTGTGK+LSL+C L W
Sbjct: 19 FPFTPYPCQIEYMEKVIKALQNNTNAILESPTGTGKTLSLLCATLSW 65
>gi|8886948|gb|AAF80634.1|AC069251_27 F2D10.21 [Arabidopsis thaliana]
Length = 1273
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYYDHK 78
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C +L W ++K
Sbjct: 36 FPYQPYGTQLAFMSRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSVLAWQQNYK 92
>gi|440803958|gb|ELR24841.1| DEAD/H (AspGlu-Ala-Asp/His) box polypeptide 11, putative
[Acanthamoeba castellanii str. Neff]
Length = 1005
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 42 LYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
+Y LD GIFESPTGTGKSLS+IC L+W D
Sbjct: 1 MYAVLDKGGLGIFESPTGTGKSLSIICSALQWLRD 35
>gi|240254129|ref|NP_173495.5| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
gi|332191893|gb|AEE30014.1| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
Length = 1175
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYYDHK 78
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C +L W ++K
Sbjct: 36 FPYQPYGTQLAFMSRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSVLAWQQNYK 92
>gi|300123500|emb|CBK24772.2| unnamed protein product [Blastocystis hominis]
Length = 280
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
FPF YDIQ ++M+ + ++ N K + ESPTGTGK+LSL+C L
Sbjct: 24 FPFPPYDIQKDYMRMVIDSIQNRKNAMLESPTGTGKTLSLLCSAL 68
>gi|297850492|ref|XP_002893127.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp.
lyrata]
gi|297338969|gb|EFH69386.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp.
lyrata]
Length = 1171
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYYDHK 78
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C +L W ++K
Sbjct: 36 FPYQPYGTQLAFMSRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSVLAWQQNYK 92
>gi|224149616|ref|XP_002336837.1| predicted protein [Populus trichocarpa]
gi|222836982|gb|EEE75375.1| predicted protein [Populus trichocarpa]
Length = 339
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 1 MASKTPNEDKEFNEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSK-----FGIFE 55
M TP + N ++ + FP+ Y Q FM + TLD ++ + E
Sbjct: 1 MVKPTPVKCTNLNPKKSYHIGGIQVEFPYKPYGTQLAFMGRVISTLDRAQRDGHCHALLE 60
Query: 56 SPTGTGKSLSLICGILKWYYDHKI 79
SPTGTGKSLSL+C L W ++K+
Sbjct: 61 SPTGTGKSLSLLCSTLAWQQNYKL 84
>gi|156836024|ref|XP_001642254.1| hypothetical protein Kpol_187p1 [Vanderwaltozyma polyspora DSM
70294]
gi|206557738|sp|A7TTL0.1|CHL1_VANPO RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|156112733|gb|EDO14396.1| hypothetical protein Kpol_187p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 829
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYYDHKI 79
F P+ Y+IQ M+ +Y L + K I ESPTGTGK+LSL+C + W D+K+
Sbjct: 5 FNHPYQPYEIQLQLMQCIYGALSSGKKIAILESPTGTGKTLSLLCSSITWLRDNKL 60
>gi|302829651|ref|XP_002946392.1| hypothetical protein VOLCADRAFT_30322 [Volvox carteri f.
nagariensis]
gi|300268138|gb|EFJ52319.1| hypothetical protein VOLCADRAFT_30322 [Volvox carteri f.
nagariensis]
Length = 700
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
+A +P EFPF + Y Q N+M+++ L + + ESPTGTGK+L L+C L W
Sbjct: 2 IAGIPVEFPF--EPYACQRNYMESVIKALQEGRNALLESPTGTGKTLCLLCSTLAWRESL 59
Query: 78 KI 79
K+
Sbjct: 60 KV 61
>gi|156379412|ref|XP_001631451.1| predicted protein [Nematostella vectensis]
gi|156218492|gb|EDO39388.1| predicted protein [Nematostella vectensis]
Length = 1082
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF YD Q +M+ + L K + ESPTGTGK+L L+C L W
Sbjct: 11 FPFKPYDCQVAYMEKVIECLQTRKNAVLESPTGTGKTLCLLCATLAW 57
>gi|380420358|ref|NP_001244074.1| probable ATP-dependent RNA helicase DDX11 isoform 4 [Homo sapiens]
gi|29476793|gb|AAH50069.1| DDX11 protein [Homo sapiens]
Length = 880
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 64/142 (45%), Gaps = 32/142 (22%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK----IEAKIKDLEI 94
M LY L+ K GIFESPTGTGKSLSLICG L W D + E+ +E L
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREEEARLLETGTGPLHD 60
Query: 95 SKNETV-----------------SEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIEN 137
K+E++ W+ Q + + R+ +D LK +
Sbjct: 61 EKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKAE-----------QA 109
Query: 138 IRKQNEKRKKSLRNDQEVKVHA 159
RKQ E+R + L++ ++K A
Sbjct: 110 RRKQREERLQQLQHRVQLKYAA 131
>gi|118383994|ref|XP_001025150.1| DNA repair helicase (rad3) [Tetrahymena thermophila]
gi|89306917|gb|EAS04905.1| DNA repair helicase (rad3) [Tetrahymena thermophila SB210]
Length = 1032
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FP YD+Q +M+++ L G+ ESPTGTGK+LS++C L W
Sbjct: 72 EVYFPHKPYDVQVVYMESVIKCLQERTHGLLESPTGTGKTLSMLCACLGW 121
>gi|414886608|tpg|DAA62622.1| TPA: hypothetical protein ZEAMMB73_124196, partial [Zea mays]
Length = 203
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILK 72
+ VP EFP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L
Sbjct: 34 VGGVPVEFPY--KPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALA 91
Query: 73 W 73
W
Sbjct: 92 W 92
>gi|328719600|ref|XP_001948918.2| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Acyrthosiphon pisum]
Length = 946
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP++ Y++Q +++ + L N G+ ESPTGTGK+LSL+C L W
Sbjct: 13 FPYEPYEVQKRYIEKVLECLQNGHNGVLESPTGTGKTLSLLCSSLAW 59
>gi|380006443|gb|AFD29612.1| RTEL1 [Schmidtea mediterranea]
Length = 1057
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIE 86
FPF+ Y Q +M+ + +L + K I ESPTGTGK+L L+C L W DH ++K+
Sbjct: 13 FPFEPYACQIIYMEKVIESLKDGKNAILESPTGTGKTLCLLCAALAW-QDH----VKKVT 67
Query: 87 AKIKD-LEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENI----RKQ 141
+D + + N ++ W + + +L + ++I+ + + S +T+ +L + I R Q
Sbjct: 68 TNSEDEILLHLNSNGNQYWNKLKKSQLNI-SKINVVPKIIYSSRTHSQLSQCINALKRTQ 126
Query: 142 NEKRKKSLRNDQE 154
RK + +E
Sbjct: 127 YCDRKVGMIASRE 139
>gi|403369956|gb|EJY84835.1| Isoform 4 of Regulator of telomere elongation helicase 1 [Oxytricha
trifallax]
Length = 1415
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +FM + L+ ++ + ESPTGTGK+LSL+C L W
Sbjct: 289 FPFKPYSCQVDFMSKVIKGLNQNENALLESPTGTGKTLSLLCASLAW 335
>gi|340374870|ref|XP_003385960.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Amphimedon queenslandica]
Length = 717
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M+ + L N+ I ESPTGTGK+LSL+C L W
Sbjct: 19 FPFTPYPCQIEYMEKVIKALQNNTNAILESPTGTGKTLSLLCATLSW 65
>gi|145517083|ref|XP_001444430.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411841|emb|CAK77033.1| unnamed protein product [Paramecium tetraurelia]
Length = 905
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP YD+Q ++M+++ L+ + + ESPTGTGK+LSL+C L W
Sbjct: 59 FPHQPYDVQKSYMESVIRALNKKQNALLESPTGTGKTLSLLCASLAW 105
>gi|397465147|ref|XP_003804384.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like, partial [Pan paniscus]
Length = 79
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 25/37 (67%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
FPFPF Y IQ +FM LY L+ K GIFESPTGT
Sbjct: 43 HFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGT 79
>gi|224061865|ref|XP_002300637.1| predicted protein [Populus trichocarpa]
gi|222842363|gb|EEE79910.1| predicted protein [Populus trichocarpa]
Length = 1183
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYYDHKI 79
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W ++K+
Sbjct: 27 FPYKPYGTQLAFMGRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNYKL 84
>gi|334182721|ref|NP_173498.3| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
gi|332191897|gb|AEE30018.1| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
Length = 1144
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYYDHK 78
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C +L W +K
Sbjct: 36 FPYQPYGTQLAFMSRVISTLDRAQRDGHSHALLESPTGTGKSLSLLCSVLAWQKSYK 92
>gi|359482607|ref|XP_002279773.2| PREDICTED: regulator of telomere elongation helicase 1-like
[Vitis vinifera]
Length = 1084
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+AYD Q +M+ + +L + ESPTGTGK+L L+C L W
Sbjct: 13 FPFEAYDCQLVYMEKVIQSLQERCNALLESPTGTGKTLCLLCATLAW 59
>gi|390602956|gb|EIN12348.1| DNA repair helicase [Punctularia strigosozonata HHB-11173 SS5]
Length = 868
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 15/132 (11%)
Query: 22 PSEF-PFPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
P +F FP+ Y Q MK+LY L++ + I ES T TGK+L L+C L W D +
Sbjct: 8 PDQFEAFPYQPPYPNQQELMKHLYSVLEHRRHTIVESRTSTGKTLVLLCATLSWLLDDRD 67
Query: 80 VGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIR 139
+ +++ L+I ++ DWI +Q+ E + R +++A +A Y+ + +R
Sbjct: 68 ---RARQGQLESLKICNSQ--DPDWIVEQTIE-RRRKELEADDEA------YEARLAELR 115
Query: 140 KQNEKRKKSLRN 151
QNE + S N
Sbjct: 116 -QNEAARTSALN 126
>gi|327284022|ref|XP_003226738.1| PREDICTED: regulator of telomere elongation helicase 1-like [Anolis
carolinensis]
Length = 1142
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK-IVGLEKI 85
FPF+ Y Q +M + L GI ESPTGTGK+L L+C L W K + +KI
Sbjct: 13 FPFEPYKCQEEYMSRVLECLQKQVNGILESPTGTGKTLCLLCSTLAWQEHFKDAISAQKI 72
Query: 86 EAKIKDLEISKNETVS 101
++ E+ + +S
Sbjct: 73 AQRLGGAELFADRPMS 88
>gi|8886947|gb|AAF80633.1|AC069251_26 F2D10.24 [Arabidopsis thaliana]
Length = 1119
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYYDHK 78
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C +L W +K
Sbjct: 36 FPYQPYGTQLAFMSRVISTLDRAQRDGHSHALLESPTGTGKSLSLLCSVLAWQKSYK 92
>gi|154341304|ref|XP_001566605.1| putative helicase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063928|emb|CAM40119.1| putative helicase [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 954
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFD Y Q FM+++ L + G+ ESPTGTGK+L L+C L W
Sbjct: 14 FPFDPYPAQVEFMRSVVECLQHGFNGLLESPTGTGKTLCLLCSTLAW 60
>gi|449274178|gb|EMC83461.1| Regulator of telomere elongation helicase 1, partial [Columba
livia]
Length = 1124
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK-IVGLEKI 85
FPF Y Q +M + L GI ESPTGTGK+L L+C L W K + KI
Sbjct: 13 FPFQPYPCQEAYMAKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWREHFKDTISARKI 72
Query: 86 EAKIKDLEI 94
++ +E+
Sbjct: 73 AQRMNGMEL 81
>gi|167999293|ref|XP_001752352.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696747|gb|EDQ83085.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+DAYD Q +M+ + +L + + ESPTGTGK+L L+C L W
Sbjct: 13 FPYDAYDCQLVYMERVISSLQQGRNALLESPTGTGKTLCLLCATLAW 59
>gi|255574578|ref|XP_002528200.1| regulator of telomere elongation helicase 1 rtel1, putative
[Ricinus communis]
gi|223532412|gb|EEF34207.1| regulator of telomere elongation helicase 1 rtel1, putative
[Ricinus communis]
Length = 1049
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP++AYD Q +M+ + +L + + ESPTGTGK+L L+C L W
Sbjct: 13 FPYEAYDCQLVYMEKVIQSLQSRCNALLESPTGTGKTLCLLCATLAW 59
>gi|401415594|ref|XP_003872292.1| putative helicase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488516|emb|CBZ23762.1| putative helicase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 953
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFD Y Q FM+++ L + G+ ESPTGTGK+L L+C L W
Sbjct: 14 FPFDPYPAQVEFMRSVVKCLQHGFNGLLESPTGTGKTLCLLCSTLGW 60
>gi|449664763|ref|XP_002167953.2| PREDICTED: regulator of telomere elongation helicase 1-like
[Hydra magnipapillata]
Length = 1225
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y+ Q +M+ + L G+ ESPTGTGK+L L+C L W
Sbjct: 13 FPFEPYECQIKYMEKVITCLQKGLNGLLESPTGTGKTLCLLCATLGW 59
>gi|307108093|gb|EFN56334.1| hypothetical protein CHLNCDRAFT_144794 [Chlorella variabilis]
Length = 1763
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FPF+AY Q ++M + L + + ESPTGTGK+L L+C L W
Sbjct: 285 EVEFPFEAYPCQLDYMTKVIQALQEGQHALLESPTGTGKTLCLLCATLAW 334
>gi|303388455|ref|XP_003072462.1| Rad3/XPD ATP-dependent DNA-binding helicase [Encephalitozoon
intestinalis ATCC 50506]
gi|303301602|gb|ADM11102.1| Rad3/XPD ATP-dependent DNA-binding helicase [Encephalitozoon
intestinalis ATCC 50506]
Length = 678
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 17/132 (12%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
++ VP E PF + Y Q M L L G+ ESPTGTGKSLS+IC +L +
Sbjct: 6 ISGVPIEMPF--EPYPAQIVTMTKLISCLTTGTSGLVESPTGTGKSLSIICAVLGYS--- 60
Query: 78 KIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIEN 137
E ++ K + + + E S E + +LK + ++ K D+LIE
Sbjct: 61 -----EYLKRGAKSINVKRREGGSLKGEEAKEEKLK-------IIICSRTHKQLDQLIEQ 108
Query: 138 IRKQNEKRKKSL 149
+RK + + + S+
Sbjct: 109 LRKTHYRPRISI 120
>gi|429965550|gb|ELA47547.1| hypothetical protein VCUG_00978 [Vavraia culicis 'floridensis']
Length = 855
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY 74
FPF Y Q + L N K GI ESPTGTGKS++++C +L W+
Sbjct: 8 IAFPFKPYPAQILTCSKIIDCLKNKKTGIIESPTGTGKSIAILCAVLAWH 57
>gi|67525973|ref|XP_661048.1| hypothetical protein AN3444.2 [Aspergillus nidulans FGSC A4]
gi|40743798|gb|EAA62984.1| hypothetical protein AN3444.2 [Aspergillus nidulans FGSC A4]
Length = 994
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
P F P+ YDIQ FM++LY L+ K IFESPTG+G L +I
Sbjct: 14 PQTFNHPYTPYDIQVRFMQSLYECLEEGKVAIFESPTGSGPRLQII 59
>gi|259485564|tpe|CBF82692.1| TPA: DNA helicase, putative (AFU_orthologue; AFUA_3G05590)
[Aspergillus nidulans FGSC A4]
Length = 841
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
P F P+ YDIQ FM++LY L+ K IFESPTG+G L +I
Sbjct: 14 PQTFNHPYTPYDIQVRFMQSLYECLEEGKVAIFESPTGSGPRLQII 59
>gi|5902361|gb|AAD55463.1|AC009322_3 Hypothetical protein [Arabidopsis thaliana]
Length = 912
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+AY Q +M + +L N + ESPTGTGK+L L+C L W
Sbjct: 58 FPFEAYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAW 104
>gi|42563365|ref|NP_178113.3| regulator of telomere elongation helicase 1 [Arabidopsis thaliana]
gi|332198212|gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana]
Length = 1040
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+AY Q +M + +L N + ESPTGTGK+L L+C L W
Sbjct: 58 FPFEAYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAW 104
>gi|12324581|gb|AAG52242.1|AC011717_10 hypothetical protein; 30600-24965 [Arabidopsis thaliana]
Length = 959
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+AY Q +M + +L N + ESPTGTGK+L L+C L W
Sbjct: 58 FPFEAYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAW 104
>gi|395506651|ref|XP_003757644.1| PREDICTED: regulator of telomere elongation helicase 1 [Sarcophilus
harrisii]
Length = 1361
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK-IVGLEKI 85
FPF Y Q ++M + L GI ESPTGTGK+L L+C L W K + KI
Sbjct: 13 FPFQPYKCQEDYMAKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHFKDTITARKI 72
Query: 86 EAKIKDLEISKNETVSEDW 104
+++ +E+ + +S W
Sbjct: 73 AERMQGVELFPDRPMS-SW 90
>gi|229891620|sp|P0C928.1|RTEL1_DANRE RecName: Full=Regulator of telomere elongation helicase 1
Length = 1177
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
FPF Y Q ++M + L G+ ESPTGTGK+L L+C L W DH
Sbjct: 13 FPFTPYPCQEDYMSKVIECLQKKVNGVLESPTGTGKTLCLLCSTLAW-RDH 62
>gi|330843781|ref|XP_003293824.1| hypothetical protein DICPUDRAFT_5561 [Dictyostelium purpureum]
gi|325075810|gb|EGC29655.1| hypothetical protein DICPUDRAFT_5561 [Dictyostelium purpureum]
Length = 617
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY 74
FPF Y Q++ M + LDN + + ESPTGTGK+L+L+C L+W+
Sbjct: 6 FPFKPYPSQASMMSRILSGLDNKENCLLESPTGTGKTLTLLCSALEWH 53
>gi|302129716|ref|NP_001013328.2| regulator of telomere elongation helicase 1 [Danio rerio]
Length = 1177
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
FPF Y Q ++M + L G+ ESPTGTGK+L L+C L W DH
Sbjct: 13 FPFTPYPCQEDYMSKVIECLQKKVNGVLESPTGTGKTLCLLCSTLAW-RDH 62
>gi|297850494|ref|XP_002893128.1| hypothetical protein ARALYDRAFT_472311 [Arabidopsis lyrata subsp.
lyrata]
gi|297338970|gb|EFH69387.1| hypothetical protein ARALYDRAFT_472311 [Arabidopsis lyrata subsp.
lyrata]
Length = 1138
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYYDHK 78
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C +L W +K
Sbjct: 36 FPYQPYGTQLAFMSRVISTLDRAQRDGHSHALLESPTGTGKSLSLLCSVLAWQKSYK 92
>gi|297842871|ref|XP_002889317.1| hypothetical protein ARALYDRAFT_477264 [Arabidopsis lyrata subsp.
lyrata]
gi|297335158|gb|EFH65576.1| hypothetical protein ARALYDRAFT_477264 [Arabidopsis lyrata subsp.
lyrata]
Length = 1016
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+AY Q +M + +L N + ESPTGTGK+L L+C L W
Sbjct: 45 FPFEAYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAW 91
>gi|159472757|ref|XP_001694511.1| ATP-dependent DNA helicase [Chlamydomonas reinhardtii]
gi|158276735|gb|EDP02506.1| ATP-dependent DNA helicase [Chlamydomonas reinhardtii]
Length = 897
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
E FP Y +Q +FM+ + TLD + E+PTG GK+LSL+C L W K E
Sbjct: 10 EVHFPHQPYGVQLSFMEKMLRTLDEQGNALLEAPTGCGKTLSLLCAALAWQAKRKRELQE 69
Query: 84 KIEAKIK 90
+ A+++
Sbjct: 70 RAAARLR 76
>gi|348533666|ref|XP_003454326.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Oreochromis niloticus]
Length = 1193
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y+ Q +M + L G+ ESPTGTGK+L L+C L W
Sbjct: 13 FPFSPYECQKAYMNKVIECLQKKVNGVLESPTGTGKTLCLLCATLAW 59
>gi|255088938|ref|XP_002506391.1| predicted protein [Micromonas sp. RCC299]
gi|226521663|gb|ACO67649.1| predicted protein [Micromonas sp. RCC299]
Length = 644
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
EV FP+DAYD Q M+ + L + + ESPTGTGK+L L+C L W
Sbjct: 14 EVTYSVDFPYDAYDCQVTMMERVVEALHAGENALLESPTGTGKTLCLLCAALGW 67
>gi|74203152|dbj|BAE26258.1| unnamed protein product [Mus musculus]
Length = 527
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|348685651|gb|EGZ25466.1| hypothetical protein PHYSODRAFT_485995 [Phytophthora sojae]
Length = 1080
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+P EFPFP YD Q +M+ + L + + I ESPTGTGK+L L+C L W
Sbjct: 9 IPVEFPFP--PYDSQLVYMEKVLLALTSKQNAILESPTGTGKTLCLLCATLAW 59
>gi|308812971|ref|XP_003083792.1| putative helicase; 55525-51977 (ISS) [Ostreococcus tauri]
gi|116055674|emb|CAL57759.1| putative helicase; 55525-51977 (ISS), partial [Ostreococcus
tauri]
Length = 657
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Query: 24 EFP-FPFDA-YDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYYD 76
+FP FP+ A Y IQ + M+ +Y + K FG+FESPTGTGK+LS++ G L W D
Sbjct: 8 DFPSFPYAAPYGIQKDLMRRVYDACERKKTFGVFESPTGTGKTLSVLIGALSWIDD 63
>gi|300706292|ref|XP_002995425.1| hypothetical protein NCER_101677 [Nosema ceranae BRL01]
gi|239604524|gb|EEQ81754.1| hypothetical protein NCER_101677 [Nosema ceranae BRL01]
Length = 600
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 30 DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
D YDIQ F+ + +DNS GIF SPTGTGK+LSL+ +L++
Sbjct: 5 DLYDIQKKFITDCKKVIDNSSVGIFSSPTGTGKTLSLLLSVLEY 48
>gi|126654047|ref|XP_001388395.1| helicase [Cryptosporidium parvum Iowa II]
gi|126117488|gb|EAZ51588.1| helicase, putative [Cryptosporidium parvum Iowa II]
Length = 775
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 25 FPFPFDAYDIQSNFMKNLY--YTLDNSKFGIFESPTGTGKSLSLICGILKW 73
F FP + Y+IQS F + Y +D GIFESPTGTGK+LS++C L W
Sbjct: 7 FGFPNEPYEIQSEFCSAAWKLYEIDGG-IGIFESPTGTGKTLSILCSSLSW 56
>gi|384253151|gb|EIE26626.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 812
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FP +AY+ Q +M+ + L K + ESPTGTGK+L L+C L W
Sbjct: 10 EVQFPHEAYECQVTYMERVITALQEGKNALLESPTGTGKTLCLLCATLAW 59
>gi|336466792|gb|EGO54956.1| hypothetical protein NEUTE1DRAFT_147626 [Neurospora tetrasperma
FGSC 2508]
gi|350288617|gb|EGZ69853.1| DNA repair helicase [Neurospora tetrasperma FGSC 2509]
Length = 1068
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 48 NSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIEAKIKDLEISKNETVSEDWIEQ 107
+++ +FESPTGTGKSLSLICG L W +HK + + EA+I+ ++ + +W+ +
Sbjct: 147 HAQIALFESPTGTGKSLSLICGSLTWLRNHKRL---QFEAEIEKIQQQMEASGEPEWMVE 203
Query: 108 QSFELK 113
+ + K
Sbjct: 204 SAIKRK 209
>gi|110741966|dbj|BAE98923.1| hypothetical protein [Arabidopsis thaliana]
Length = 652
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+AY Q +M + +L N + ESPTGTGK+L L+C L W
Sbjct: 13 FPFEAYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAW 59
>gi|403223632|dbj|BAM41762.1| helicase [Theileria orientalis strain Shintoku]
Length = 954
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD---HKIVGLE 83
FP++ Y++Q +FM+++ + + K + ESPTGTGK+LSLIC L +KI+G +
Sbjct: 18 FPYEPYELQKSFMESVIKAIKDGKNALLESPTGTGKTLSLICASLACILSNKTNKILGGK 77
Query: 84 KIE 86
+E
Sbjct: 78 TLE 80
>gi|145474073|ref|XP_001423059.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390119|emb|CAK55661.1| unnamed protein product [Paramecium tetraurelia]
Length = 306
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
+ S++PFP Y Q + K++Y +L +K IFESPTGTGKS +LI G L + D K
Sbjct: 13 IKSQYPFP--PYQSQLDLSKDIYVSLAQGTKVSIFESPTGTGKSYALIEGALNYLEDIKS 70
Query: 80 VGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKM 114
L K++ K + + DW + ELK+
Sbjct: 71 NTLIKVKQK------CQIDDGMPDWFNEPDVELKL 99
>gi|449018745|dbj|BAM82147.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 1142
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 1 MASKTPNEDKEFNEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
MAS +P + + +VP EFPF + Y Q +M+++ L + + ESPTGT
Sbjct: 1 MASSSPAPGRTLF----IRQVPVEFPF--EPYPCQVRYMEHVIEALQTGQNALLESPTGT 54
Query: 61 GKSLSLICGILKW 73
GK+L L+C L W
Sbjct: 55 GKTLGLLCAALAW 67
>gi|302776424|ref|XP_002971377.1| hypothetical protein SELMODRAFT_94786 [Selaginella
moellendorffii]
gi|300161359|gb|EFJ27975.1| hypothetical protein SELMODRAFT_94786 [Selaginella
moellendorffii]
Length = 792
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+DAYD Q +M+++ L + + ESPTGTGK+L L+C L W
Sbjct: 14 FPYDAYDCQLVYMESVIAALQKGQNALLESPTGTGKTLCLLCATLAW 60
>gi|340379361|ref|XP_003388195.1| PREDICTED: hypothetical protein LOC100635699 [Amphimedon
queenslandica]
Length = 375
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 6 PNEDKEFNEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLS 65
PN + N+ P++ VP FP Y Q M + L+ S + ESPTG+GKSL+
Sbjct: 4 PNPKEVRNDLYPISGVPVRFPC--KPYPTQLQMMSKIIQALNKSDNALLESPTGSGKSLA 61
Query: 66 LICGILKW 73
L+C + W
Sbjct: 62 LLCSTIAW 69
>gi|302756033|ref|XP_002961440.1| hypothetical protein SELMODRAFT_77246 [Selaginella
moellendorffii]
gi|300170099|gb|EFJ36700.1| hypothetical protein SELMODRAFT_77246 [Selaginella
moellendorffii]
Length = 787
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+DAYD Q +M+++ L + + ESPTGTGK+L L+C L W
Sbjct: 14 FPYDAYDCQLVYMESVIAALQKGQNALLESPTGTGKTLCLLCATLAW 60
>gi|71029556|ref|XP_764421.1| DNA repair helicase [Theileria parva strain Muguga]
gi|68351375|gb|EAN32138.1| DNA repair helicase, putative [Theileria parva]
Length = 962
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
E FPF Y Q ++M+N+ T+ SK + ESPTGTGK+LSL+C +
Sbjct: 15 EVKFPFHPYRCQRSYMENVIKTIKESKNALLESPTGTGKTLSLLCSTI 62
>gi|66807703|ref|XP_637574.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
gi|60465999|gb|EAL64066.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
Length = 1078
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q++ M + LD+ + I ESPTGTGK+LSL+C L W
Sbjct: 200 FPFKPYACQASMMSRILEGLDSKENCILESPTGTGKTLSLLCSSLAW 246
>gi|336369679|gb|EGN98020.1| hypothetical protein SERLA73DRAFT_56211 [Serpula lacrymans var.
lacrymans S7.3]
Length = 859
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 21 VPSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
VP FP FP++ Y IQ + M+++Y +++N + I ESPTGTGK+
Sbjct: 12 VPDSFPAFPYNPYPIQIDLMQHVYSSIENRQVAIVESPTGTGKT 55
>gi|336382459|gb|EGO23609.1| hypothetical protein SERLADRAFT_349743 [Serpula lacrymans var.
lacrymans S7.9]
Length = 848
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 21 VPSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
VP FP FP++ Y IQ + M+++Y +++N + I ESPTGTGK+
Sbjct: 12 VPDSFPAFPYNPYPIQIDLMQHVYSSIENRQVAIVESPTGTGKT 55
>gi|326428226|gb|EGD73796.1| hypothetical protein PTSG_05489 [Salpingoeca sp. ATCC 50818]
Length = 1032
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP + YD+Q+ +M +L L+ K + ESPTGTGK+L L+C L W
Sbjct: 14 FPHNPYDLQTAYMNSLIQALNEGKNAMLESPTGTGKTLCLLCASLAW 60
>gi|345805276|ref|XP_852649.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Canis lupus familiaris]
Length = 1247
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIE 86
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W + +
Sbjct: 17 FPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSTLAWQ--------QSVS 68
Query: 87 AKIKDLEISKNET 99
K+ D +SK E
Sbjct: 69 GKLVDESLSKTEV 81
>gi|221060536|ref|XP_002260913.1| DNA-repair helicase [Plasmodium knowlesi strain H]
gi|193810987|emb|CAQ42885.1| DNA-repair helicase, putative [Plasmodium knowlesi strain H]
Length = 1106
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
E FP++ YD Q N+M ++ L + I ESPTGTGK+L L+C + + D LE
Sbjct: 27 EVYFPYELYDCQYNYMLSVLNALKKKENAILESPTGTGKTLCLLCASISYLVD----VLE 82
Query: 84 KIEAKIKDLEISKN-ETVSEDWIEQQS 109
K A +++ I++N + +S D+ E ++
Sbjct: 83 KKGAFSENINITENKKNISLDFKENEN 109
>gi|354497402|ref|XP_003510809.1| PREDICTED: Fanconi anemia group J protein homolog [Cricetulus
griseus]
gi|344242804|gb|EGV98907.1| Fanconi anemia group J protein-like [Cricetulus griseus]
Length = 1166
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 63
>gi|398019061|ref|XP_003862695.1| helicase, putative [Leishmania donovani]
gi|322500925|emb|CBZ36002.1| helicase, putative [Leishmania donovani]
Length = 953
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y Q FM+++ L + G+ ESPTGTGK+L L+C L W
Sbjct: 14 FPFEPYPAQVEFMRSVVKCLQHGFNGLLESPTGTGKTLCLLCSTLGW 60
>gi|146093363|ref|XP_001466793.1| putative helicase [Leishmania infantum JPCM5]
gi|134071156|emb|CAM69841.1| putative helicase [Leishmania infantum JPCM5]
Length = 953
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y Q FM+++ L + G+ ESPTGTGK+L L+C L W
Sbjct: 14 FPFEPYPAQVEFMRSVVKCLQHGFNGLLESPTGTGKTLCLLCSTLGW 60
>gi|342180293|emb|CCC89770.1| putative helicase [Trypanosoma congolense IL3000]
Length = 965
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
E FPF Y +Q +M+ + +L + + ESPTGTGK++ L+C L W D
Sbjct: 10 EVAFPFSPYTVQVEYMQAVLRSLKGAHNALLESPTGTGKTMCLLCATLAWLED 62
>gi|156102350|ref|XP_001616868.1| DNA repair helicase [Plasmodium vivax Sal-1]
gi|148805742|gb|EDL47141.1| DNA repair helicase, putative [Plasmodium vivax]
Length = 1103
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
E FP++ YD Q N+M ++ L + I ESPTGTGK+L L+C + + D LE
Sbjct: 27 EVYFPYELYDCQYNYMLSVLNALKRKENAILESPTGTGKTLCLLCASISYLVD----VLE 82
Query: 84 KIEAKIKDLEISKN-ETVSEDWIEQQS 109
K A +++ I++N + +S D+ E ++
Sbjct: 83 KKGAFSENINITENKKNISFDFKENEN 109
>gi|109488700|ref|XP_340870.3| PREDICTED: Fanconi anemia group J protein homolog [Rattus
norvegicus]
gi|109491562|ref|XP_001081096.1| PREDICTED: Fanconi anemia group J protein homolog [Rattus
norvegicus]
Length = 1166
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 63
>gi|145525952|ref|XP_001448787.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416353|emb|CAK81390.1| unnamed protein product [Paramecium tetraurelia]
Length = 901
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP Y++Q +M+++ L+ + + ESPTGTGK+LSL+C L W
Sbjct: 59 FPHQPYEVQKAYMESVIQALNMKQNALLESPTGTGKTLSLLCASLAW 105
>gi|19074028|ref|NP_584634.1| ATP-DEPENDENT DNA-BINDING HELICASE (RAD3/XPD subfamily)
[Encephalitozoon cuniculi GB-M1]
gi|19068670|emb|CAD25138.1| ATP-DEPENDENT DNA-BINDING HELICASE (RAD3/XPD subfamily)
[Encephalitozoon cuniculi GB-M1]
gi|449329243|gb|AGE95516.1| ATP-dependent DNA-binding helicase [Encephalitozoon cuniculi]
Length = 678
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 17/132 (12%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
++ VP E PF + Y Q M L L G+ ESPTGTGKSLS+IC +L Y +H
Sbjct: 6 ISGVPIEMPF--EPYPAQIVTMTKLISCLMTRTSGLVESPTGTGKSLSIICAVLG-YNEH 62
Query: 78 KIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIEN 137
+ I AK ++ K E E+ K++ I + ++ K D+L++
Sbjct: 63 LKRSIRGIGAKRREGGGPKGEEAREE---------KLKIIICS-----RTHKQLDQLVDQ 108
Query: 138 IRKQNEKRKKSL 149
+RK + + S+
Sbjct: 109 LRKTQYRPRISI 120
>gi|74217142|dbj|BAC34798.2| unnamed protein product [Mus musculus]
Length = 577
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 63
>gi|255539256|ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
communis]
gi|223551394|gb|EEF52880.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
communis]
Length = 1248
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNS-----KFGIFESPTGTGKSLSLICGILKWYYDHK 78
FP+ Y Q FM + TLD + + ESPTGTGKSLSL+C L W ++K
Sbjct: 28 FPYQPYGPQLAFMGRVISTLDRAVRDGHCHALLESPTGTGKSLSLLCSTLAWQQNYK 84
>gi|147865346|emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]
Length = 1261
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKW 73
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W
Sbjct: 23 FPYQPYGSQLAFMGRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSALAW 74
>gi|401825484|ref|XP_003886837.1| RAD3-like DNA-binding helicase [Encephalitozoon hellem ATCC 50504]
gi|392997993|gb|AFM97856.1| RAD3-like DNA-binding helicase [Encephalitozoon hellem ATCC 50504]
Length = 678
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 17/132 (12%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
++ VP + PF + Y Q M L L G+ ESPTGTGKSLS++C +L Y +H
Sbjct: 6 ISGVPIDMPF--EPYPAQIVTMTKLISCLMTGTSGLVESPTGTGKSLSILCAVLG-YNEH 62
Query: 78 KIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIEN 137
G+ AK ++ K E E+ K++ I + ++ K D+LI+
Sbjct: 63 LKKGIGGCSAKRREGGGQKGEEAKEE---------KLKIIICS-----RTHKQLDQLIDQ 108
Query: 138 IRKQNEKRKKSL 149
+RK + + S+
Sbjct: 109 LRKTQYRPRISI 120
>gi|149053741|gb|EDM05558.1| BRCA1 interacting protein C-terminal helicase 1 (predicted)
[Rattus norvegicus]
Length = 964
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 63
>gi|345789824|ref|XP_543101.3| PREDICTED: regulator of telomere elongation helicase 1 [Canis
lupus familiaris]
Length = 1689
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFEPYKCQEEYMSKVLECLQKRVNGILESPTGTGKTLCLLCSTLAW 59
>gi|359491914|ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
Length = 1255
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKW 73
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W
Sbjct: 23 FPYQPYGSQLAFMGRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSALAW 74
>gi|148683833|gb|EDL15780.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_b
[Mus musculus]
Length = 1180
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 23 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 69
>gi|30795235|ref|NP_840094.1| Fanconi anemia group J protein homolog [Mus musculus]
gi|78099253|sp|Q5SXJ3.1|FANCJ_MOUSE RecName: Full=Fanconi anemia group J protein homolog;
Short=Protein FACJ; AltName: Full=ATP-dependent RNA
helicase BRIP1; AltName: Full=BRCA1-associated
C-terminal helicase 1; AltName: Full=BRCA1-interacting
protein C-terminal helicase 1; Short=BRCA1-interacting
protein 1
gi|62740250|gb|AAH94252.1| BRCA1 interacting protein C-terminal helicase 1 [Mus musculus]
Length = 1174
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 63
>gi|357454989|ref|XP_003597775.1| Regulator of telomere elongation helicase [Medicago truncatula]
gi|355486823|gb|AES68026.1| Regulator of telomere elongation helicase [Medicago truncatula]
Length = 1048
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP++AYD Q +M + +L + ESPTGTGK+L L+C L W
Sbjct: 13 FPYEAYDSQLVYMDKVMQSLQEESNALLESPTGTGKTLCLLCATLAW 59
>gi|357455003|ref|XP_003597782.1| Regulator of telomere elongation helicase [Medicago truncatula]
gi|355486830|gb|AES68033.1| Regulator of telomere elongation helicase [Medicago truncatula]
Length = 1089
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP++AYD Q +M + +L + ESPTGTGK+L L+C L W
Sbjct: 54 FPYEAYDSQLVYMDKVMQSLQEESNALLESPTGTGKTLCLLCATLAW 100
>gi|297481774|ref|XP_002692293.1| PREDICTED: regulator of telomere elongation helicase 1 [Bos
taurus]
gi|296481261|tpg|DAA23376.1| TPA: regulator of telomere length-like [Bos taurus]
Length = 151
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|388583056|gb|EIM23359.1| DNA repair helicase [Wallemia sebi CBS 633.66]
Length = 831
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIE 86
FP++ Y IQ+ FM Y +NSK + ESPTGTGKSLSL+ L W D+ I E
Sbjct: 8 FPYEPYPIQNEFMSACYDACENSKVAVLESPTGTGKSLSLLVASLSWLRDNAIRSRESTI 67
Query: 87 AKIKDLEISKNETVSEDWIEQQSFELK---MRNQIDALKDALKSQKTYDELIEN--IRKQ 141
+K+++ E+ N W+ + + +LK + N++ + + L + K + + N ++
Sbjct: 68 SKLRE-ELLANRGNKPAWVIEHTIKLKREDLENEVRLMDERLAAVKEKEASLRNHSLKDT 126
Query: 142 NEKRKKSLRND 152
+K +K +R D
Sbjct: 127 IDKPRKKIRID 137
>gi|405118752|gb|AFR93526.1| CHL1 helicase [Cryptococcus neoformans var. grubii H99]
Length = 853
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 13 NEQRPLAEVPSEFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
N P P FPFP+ YDIQ + M+ ++ +++ K I ESPTGTGKSLSL+ L
Sbjct: 7 NSAAPSLPTPETFPFPYPKPYDIQLDLMRVVFRAIEDGKIAIVESPTGTGKSLSLLTSTL 66
Query: 72 KWYYDHKIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTY 131
W H+ EA ++ + + ++ W+ + + ++KM N++ A++
Sbjct: 67 TWLSQHQARLDTAAEASLRQ-QFAADDPDDPPWVIEHAVKVKM-NELRAVQ--------- 115
Query: 132 DELIENIRKQNEKRKKSLRNDQEVKVHALTY 162
+E + + RKK +R +E V A +
Sbjct: 116 ---LEREERLEKARKKEMRMRREGGVGAFRH 143
>gi|301608630|ref|XP_002933884.1| PREDICTED: Fanconi anemia group J protein-like [Xenopus (Silurana)
tropicalis]
Length = 1229
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIE 86
FP AY Q M ++ L+ + + ESPTG+GKSL+L+C L W + G + ++
Sbjct: 17 FPCRAYPSQLAMMNSIMRGLNCKQHCLLESPTGSGKSLALLCSALAW--QQSLYGKQAVD 74
Query: 87 AKIKDLEISKNETVS 101
K + E +K E V+
Sbjct: 75 EKSNEKECTKMERVT 89
>gi|74146859|dbj|BAE41393.1| unnamed protein product [Mus musculus]
Length = 824
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 63
>gi|164429296|ref|XP_001728521.1| hypothetical protein NCU11409 [Neurospora crassa OR74A]
gi|206557740|sp|A7UXD4.1|CHL1_NEUCR RecName: Full=ATP-dependent RNA helicase chl-1; AltName:
Full=Chromosome loss protein 1
gi|157073424|gb|EDO65430.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1073
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 48 NSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+++ +FESPTGTGKSLSLICG L W +HK
Sbjct: 147 HAQIALFESPTGTGKSLSLICGSLTWLRNHK 177
>gi|74138560|dbj|BAE41179.1| unnamed protein product [Mus musculus]
gi|74216986|dbj|BAE26603.1| unnamed protein product [Mus musculus]
Length = 898
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 63
>gi|297743289|emb|CBI36156.3| unnamed protein product [Vitis vinifera]
Length = 777
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+AYD Q +M+ + +L + ESPTGTGK+L L+C L W
Sbjct: 13 FPFEAYDCQLVYMEKVIQSLQERCNALLESPTGTGKTLCLLCATLAW 59
>gi|403282703|ref|XP_003932780.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Saimiri boliviensis boliviensis]
Length = 1604
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFEPYKCQQEYMAKVLECLQKKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|326931537|ref|XP_003211885.1| PREDICTED: Fanconi anemia group J protein homolog [Meleagris
gallopavo]
Length = 1257
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M + L+N + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNAIVKGLNNGQHCLLESPTGSGKSLALLCSALSW 63
>gi|389585879|dbj|GAB68609.1| DNA repair helicase, partial [Plasmodium cynomolgi strain B]
Length = 1101
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
E FP++ YD Q N+M ++ L + I ESPTGTGK+L L+C + + D +E
Sbjct: 27 EVYFPYELYDCQYNYMLSVLNALKKKENAILESPTGTGKTLCLLCASISYLVD----VME 82
Query: 84 KIEAKIKDLEISKN-ETVSEDWIEQQS 109
K A +++ I++N + +S D+ E ++
Sbjct: 83 KKGAFSENINITENKKNISFDFKENEN 109
>gi|297745566|emb|CBI40731.3| unnamed protein product [Vitis vinifera]
Length = 1218
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKW 73
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W
Sbjct: 23 FPYQPYGSQLAFMGRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSALAW 74
>gi|124808195|ref|XP_001348254.1| DNA-repair helicase, putative [Plasmodium falciparum 3D7]
gi|23497145|gb|AAN36693.1| DNA-repair helicase, putative [Plasmodium falciparum 3D7]
Length = 1160
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
E FP++ YD Q N+M ++ L + I ESPTGTGK+L L+C + + D
Sbjct: 28 EVYFPYELYDCQYNYMLSVLSALKKRENAILESPTGTGKTLCLLCASISYVVD 80
>gi|84997393|ref|XP_953418.1| helicase [Theileria annulata strain Ankara]
gi|65304414|emb|CAI76793.1| helicase, putative [Theileria annulata]
Length = 951
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
FPF Y Q ++M+++ T+ SK + ESPTGTGK+LSLIC L
Sbjct: 18 FPFYPYRCQRSYMEHVIKTIKESKNALLESPTGTGKTLSLICSTL 62
>gi|338719447|ref|XP_001492963.3| PREDICTED: regulator of telomere elongation helicase 1-like
[Equus caballus]
Length = 1344
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY-YDHKIVGLEKI 85
FPF Y Q +M + L G+ ESPTGTGK+L L+C L W + H + KI
Sbjct: 13 FPFQPYKCQEEYMTKVLECLQKKVNGVLESPTGTGKTLCLLCTTLAWREHLHDAISARKI 72
Query: 86 EAK 88
A+
Sbjct: 73 AAR 75
>gi|396080955|gb|AFN82575.1| Rad3/XPD ATP-dependent DNA-binding helicase [Encephalitozoon
romaleae SJ-2008]
Length = 678
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 17/132 (12%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
++ VP E PF + Y Q M L L G+ ESPTGTGKSLS++C L Y +H
Sbjct: 6 ISGVPIEMPF--EPYPAQIITMTKLISCLMTGTSGLVESPTGTGKSLSILCAALG-YSEH 62
Query: 78 KIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIEN 137
G+ K ++ K E V E+ K++ I + ++ K D+LI+
Sbjct: 63 LKRGIRSGCGKRREGGGMKGEEVKEE---------KLKIIICS-----RTHKQLDQLIDQ 108
Query: 138 IRKQNEKRKKSL 149
+RK K + S+
Sbjct: 109 LRKTQYKPRISI 120
>gi|412986103|emb|CCO17303.1| predicted protein [Bathycoccus prasinos]
Length = 1048
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 25 FPFPFDA-YDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYYD-HKIVG 81
+ FP+ Y+ Q FM Y N G FESPTGTGK+LS++C L W D ++++
Sbjct: 32 YSFPYSPPYEQQIQFMSKAYECCRNGIPIGAFESPTGTGKTLSILCSALTWMEDRNRLLR 91
Query: 82 LEKIE---AKIKDLEISKNETV 100
K+E ++ + +S E V
Sbjct: 92 AGKVEEADGRVNERLVSSKEGV 113
>gi|58264204|ref|XP_569258.1| CHL1 helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|57223908|gb|AAW41951.1| CHL1 helicase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 849
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 17 PLAEVPSEFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGK 62
P P FPFP+ YDIQ + M+ ++ +++ K I ESPTGTGK
Sbjct: 11 PCLPTPETFPFPYPKPYDIQLDLMRVVFRAIEDGKIAIVESPTGTGK 57
>gi|209878272|ref|XP_002140577.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
gi|209556183|gb|EEA06228.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
Length = 1091
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
FP+ AYD Q +M+ + Y+L + K + ESPTGTGK++ L+ L + D
Sbjct: 17 FPYKAYDCQITYMEKVLYSLKHRKHALLESPTGTGKTMCLLASTLAFQRD 66
>gi|449269835|gb|EMC80576.1| Fanconi anemia group J protein like protein [Columba livia]
Length = 1261
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M + L+N + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSALSW 63
>gi|431890862|gb|ELK01741.1| Fanconi anemia group J protein [Pteropus alecto]
Length = 1164
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L+N + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNSIVRGLNNKQHCLLESPTGSGKSLALLCSALAW 63
>gi|326667712|ref|XP_002664623.2| PREDICTED: Fanconi anemia group J protein homolog [Danio rerio]
Length = 162
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L+N + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNSIIRGLNNGQHCLLESPTGSGKSLALLCSALAW 63
>gi|338711555|ref|XP_001917874.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J
protein-like, partial [Equus caballus]
Length = 1219
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 16 FPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 62
>gi|426241833|ref|XP_004014789.1| PREDICTED: regulator of telomere elongation helicase 1 [Ovis
aries]
Length = 1305
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|443694244|gb|ELT95437.1| hypothetical protein CAPTEDRAFT_179377 [Capitella teleta]
Length = 837
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 17 PLAEVPS-EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
PL E FPFD Y Q ++M ++ L + I ESPTGTGK+L L+C L W
Sbjct: 2 PLVEASGVSVNFPFDPYPCQVDYMSSVVSCLKTGQNAILESPTGTGKTLCLLCSSLAW 59
>gi|260789809|ref|XP_002589937.1| hypothetical protein BRAFLDRAFT_231064 [Branchiostoma floridae]
gi|229275123|gb|EEN45948.1| hypothetical protein BRAFLDRAFT_231064 [Branchiostoma floridae]
Length = 823
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y Q ++M+ + L G+ ESPTGTGK+L L+C L W
Sbjct: 13 FPFEPYACQRSYMEKVIQCLQEGTNGVLESPTGTGKTLCLLCATLAW 59
>gi|410953370|ref|XP_003983344.1| PREDICTED: regulator of telomere elongation helicase 1 [Felis
catus]
Length = 1477
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQKKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|301780626|ref|XP_002925736.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1-like [Ailuropoda melanoleuca]
Length = 1303
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQKKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|440889948|gb|ELR44730.1| Regulator of telomere elongation helicase 1 [Bos grunniens mutus]
Length = 1264
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|334312296|ref|XP_001375942.2| PREDICTED: regulator of telomere elongation helicase 1 [Monodelphis
domestica]
Length = 1605
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK-IVGLEKI 85
FPF Y Q ++M + L G+ ESPTGTGK+L L+C L W K + KI
Sbjct: 13 FPFQPYKCQEDYMTKVLECLQKKVNGVLESPTGTGKTLCLLCTTLAWREHFKDTITARKI 72
Query: 86 EAKIKDLEISKNETVS 101
+++ +E+ + +S
Sbjct: 73 AERMQGVELFPDRPMS 88
>gi|441639260|ref|XP_004090200.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Nomascus leucogenys]
Length = 1342
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|301777952|ref|XP_002924394.1| PREDICTED: Fanconi anemia group J protein-like [Ailuropoda
melanoleuca]
gi|281342514|gb|EFB18098.1| hypothetical protein PANDA_013720 [Ailuropoda melanoleuca]
Length = 1249
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|395845987|ref|XP_003795698.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Otolemur garnettii]
Length = 1234
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|402899850|ref|XP_003912899.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Papio anubis]
Length = 1248
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|82752532|ref|XP_727340.1| DNA repair helicase [Plasmodium yoelii yoelii 17XNL]
gi|23483134|gb|EAA18905.1| DNA repair helicase, putative [Plasmodium yoelii yoelii]
Length = 1069
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FP++ YD Q N+M ++ L + I ESPTGTGK+L L+C + +
Sbjct: 27 EVCFPYELYDCQYNYMLSVLNALKKKENAILESPTGTGKTLCLLCASISY 76
>gi|74271901|ref|NP_001028230.1| Fanconi anemia group J protein homolog [Gallus gallus]
gi|78099252|sp|Q3YK19.1|FANCJ_CHICK RecName: Full=Fanconi anemia group J protein homolog;
Short=Protein FACJ; AltName: Full=ATP-dependent RNA
helicase BRIP1
gi|72199300|gb|AAZ66861.1| BRIP1 [Gallus gallus]
Length = 1252
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M + L+N + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSALSW 63
>gi|148225626|ref|NP_001091044.1| regulator of telomere elongation helicase 1 [Bos taurus]
gi|84105070|gb|ABC54575.1| regulator of telomere length helicase 1 [Bos taurus]
gi|84105072|gb|ABC54576.1| regulator of telomere length helicase 1 [Bos taurus]
Length = 1266
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|432094035|gb|ELK25827.1| Regulator of telomere elongation helicase 1 [Myotis davidii]
Length = 1389
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L G+ ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMAKVLECLQKKVNGVLESPTGTGKTLCLLCSTLAW 59
>gi|57012613|sp|Q9BX63.1|FANCJ_HUMAN RecName: Full=Fanconi anemia group J protein; Short=Protein FACJ;
AltName: Full=ATP-dependent RNA helicase BRIP1;
AltName: Full=BRCA1-associated C-terminal helicase 1;
AltName: Full=BRCA1-interacting protein C-terminal
helicase 1; Short=BRCA1-interacting protein 1
gi|13661819|gb|AAK38111.1|AF360549_1 BRCA1-binding helicase-like protein BACH1 [Homo sapiens]
gi|75516497|gb|AAI01473.1| BRCA1 interacting protein C-terminal helicase 1 [Homo sapiens]
gi|75516501|gb|AAI01475.1| BRCA1 interacting protein C-terminal helicase 1 [Homo sapiens]
gi|313883612|gb|ADR83292.1| BRCA1 interacting protein C-terminal helicase 1 [synthetic
construct]
Length = 1249
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|397486822|ref|XP_003814520.1| PREDICTED: Fanconi anemia group J protein [Pan paniscus]
Length = 1249
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|397477200|ref|XP_003809966.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 2
[Pan paniscus]
Length = 1401
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|297272722|ref|XP_002808171.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J
protein-like [Macaca mulatta]
Length = 1151
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|374674404|dbj|BAA83040.3| KIAA1088 protein, partial [Homo sapiens]
Length = 1400
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|89887295|gb|ABD78307.1| regulator of telomere length splice variant isoform 2 [Bos
taurus]
Length = 1237
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|301897118|ref|NP_114432.2| Fanconi anemia group J protein [Homo sapiens]
gi|119571815|gb|EAW51430.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
gi|119571816|gb|EAW51431.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
gi|119571817|gb|EAW51432.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
gi|119571818|gb|EAW51433.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
Length = 1249
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|168269672|dbj|BAG09963.1| tumor necrosis factor receptor superfamily member 6B precursor
[synthetic construct]
Length = 1400
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|7012929|gb|AAF35243.1| helicase-like protein NHL [Homo sapiens]
Length = 1400
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|114669761|ref|XP_511607.2| PREDICTED: Fanconi anemia group J protein [Pan troglodytes]
gi|410223276|gb|JAA08857.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
gi|410257750|gb|JAA16842.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
gi|410303552|gb|JAA30376.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
gi|410331379|gb|JAA34636.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
Length = 1249
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|403274761|ref|XP_003929130.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Saimiri boliviensis boliviensis]
Length = 1252
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|89887293|gb|ABD78306.1| regulator of telomere length splice variant isoform 1 [Bos
taurus]
Length = 1082
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|229891626|sp|A4K436.1|RTEL1_BOVIN RecName: Full=Regulator of telomere elongation helicase 1
gi|89887297|gb|ABD78308.1| regulator of telomere length splice variant isoform 3 [Bos
taurus]
Length = 1216
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|444517021|gb|ELV11342.1| Regulator of telomere elongation helicase 1 [Tupaia chinensis]
Length = 1288
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L G+ ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEQYMTKVLECLQKKVHGLLESPTGTGKTLCLLCTTLAW 59
>gi|390462826|ref|XP_002747823.2| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Callithrix jacchus]
Length = 1823
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFKPYKCQQEYMAKVLECLQKKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|119595650|gb|EAW75244.1| hCG22751, isoform CRA_e [Homo sapiens]
Length = 1400
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|47212324|emb|CAF91262.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1212
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIE 86
FPF Y Q +M+ + L+ G+ ESPTGTGK+L L+C L W K +KI
Sbjct: 13 FPFAPYACQREYMRKVIECLEQKTNGVLESPTGTGKTLCLLCSALAWREQLK----DKIS 68
Query: 87 AKIKD 91
+K+ +
Sbjct: 69 SKMME 73
>gi|345325239|ref|XP_001508332.2| PREDICTED: regulator of telomere elongation helicase 1
[Ornithorhynchus anatinus]
Length = 1585
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK-IVGLEKI 85
FPF Y Q ++M + L GI ESPTGTGK+L L+C L W + + KI
Sbjct: 13 FPFQPYKCQEDYMAKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHFRDTISARKI 72
Query: 86 EAKIKDLEISKNETVS 101
++ E+ N +S
Sbjct: 73 AERMNGEELFPNRPMS 88
>gi|297715610|ref|XP_002834155.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Pongo abelii]
Length = 1248
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|296201899|ref|XP_002806878.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Callithrix jacchus]
Length = 1252
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|332258882|ref|XP_003278520.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Nomascus leucogenys]
Length = 1248
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|320167785|gb|EFW44684.1| DEAH helicase isoform 6 [Capsaspora owczarzaki ATCC 30864]
Length = 1319
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ YD Q +M+ + L + ESPTGTGK+L L+C L W
Sbjct: 16 FPFNPYDCQLVYMEQVIQCLQEGTNALLESPTGTGKTLCLLCAALGW 62
>gi|339240165|ref|XP_003376008.1| fanconi anemia group J protein-like protein [Trichinella
spiralis]
gi|316975301|gb|EFV58747.1| fanconi anemia group J protein-like protein [Trichinella
spiralis]
Length = 822
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%)
Query: 15 QRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
Q LA ++ FPF Y Q M L +S + ESPTGTGKSL+L+C L W
Sbjct: 13 QMNLAVGGADISFPFSPYPSQRAIMDRTLRALKHSNNCLIESPTGTGKSLALLCSALAW 71
>gi|89887299|gb|ABD78309.1| regulator of telomere length splice variant isoform 4 [Bos
taurus]
Length = 1121
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|414886609|tpg|DAA62623.1| TPA: hypothetical protein ZEAMMB73_124196, partial [Zea mays]
Length = 631
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKW 73
VP EFP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W
Sbjct: 37 VPVEFPY--KPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAW 92
>gi|328772350|gb|EGF82388.1| hypothetical protein BATDEDRAFT_22849 [Batrachochytrium
dendrobatidis JAM81]
Length = 996
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q+ M + L S+ + ESPTGTGK+L L+C L W
Sbjct: 28 FPFQPYPQQNALMTTIINALQKSENALVESPTGTGKTLCLLCSTLAW 74
>gi|297259357|ref|XP_001113864.2| PREDICTED: regulator of telomere elongation helicase 1-like
[Macaca mulatta]
Length = 1347
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|432894997|ref|XP_004076035.1| PREDICTED: Fanconi anemia group J protein homolog [Oryzias
latipes]
Length = 1273
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q + M ++ L+ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLSMMNSIVRGLNYGQHCLLESPTGSGKSLALLCSTLAW 63
>gi|312091190|ref|XP_003146892.1| hypothetical protein LOAG_11323 [Loa loa]
Length = 438
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
S FPF+ Y+ Q FM+ + L + ESPTGTGK+L L+C + + D+K
Sbjct: 9 STVEFPFEPYECQIKFMEKVVEALWTGQNAALESPTGTGKTLCLLCAAIAFLKDYK 64
>gi|242003120|ref|XP_002422617.1| regulator of telomere elongation helicase 1 rtel1, putative
[Pediculus humanus corporis]
gi|212505418|gb|EEB09879.1| regulator of telomere elongation helicase 1 rtel1, putative
[Pediculus humanus corporis]
Length = 1016
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+P YDIQ ++M + LD + ESPTGTGK+L L + W
Sbjct: 13 FPYPI-PYDIQKSYMNKVLTCLDEKTHAVLESPTGTGKTLCLFAPVTAW 60
>gi|444313385|ref|XP_004177350.1| hypothetical protein TBLA_0A00310 [Tetrapisispora blattae CBS
6284]
gi|387510389|emb|CCH57831.1| hypothetical protein TBLA_0A00310 [Tetrapisispora blattae CBS
6284]
Length = 893
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 28 PFDAYDIQSNFMKNLYYTLD-NSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
PF YDIQ M LY +L K I ESPTGTGK+LSLIC L + D K
Sbjct: 29 PFHPYDIQLQLMTFLYDSLFLEKKVLIVESPTGTGKTLSLICSTLTYLRDIK 80
>gi|452822429|gb|EME29448.1| DNA excision repair protein ERCC-2 [Galdieria sulphuraria]
Length = 788
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 5/43 (11%)
Query: 45 TLDNSKFGIFESPTGTGKSLSLICGILKW---YYDHKIVGLEK 84
++ GI ESPTGTGKSLS++CG+L W YY+ G+EK
Sbjct: 3 VIETGTIGILESPTGTGKSLSIVCGVLTWLRQYYERN--GIEK 43
>gi|119595646|gb|EAW75240.1| hCG22751, isoform CRA_b [Homo sapiens]
gi|119595651|gb|EAW75245.1| hCG22751, isoform CRA_b [Homo sapiens]
Length = 1300
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|410055436|ref|XP_003953846.1| PREDICTED: regulator of telomere elongation helicase 1 [Pan
troglodytes]
Length = 1301
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|198429884|ref|XP_002120239.1| PREDICTED: similar to BRIP1 [Ciona intestinalis]
Length = 1145
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
FPF Y Q + M + L S+ + ESPTG+GK+LSL+C L W D
Sbjct: 19 FPFKPYPSQLSMMSMIVKGLQRSEHCLLESPTGSGKTLSLLCSALAWQQD 68
>gi|321248407|ref|XP_003191119.1| CHL1 helicase [Cryptococcus gattii WM276]
gi|317457586|gb|ADV19332.1| CHL1 helicase, putative [Cryptococcus gattii WM276]
Length = 854
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 17 PLAEVPSEFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGK 62
P P FPFP+ YDIQ + M+ ++ +++ K I ESPTGTGK
Sbjct: 11 PSLSTPETFPFPYPKPYDIQLDLMRVVFRAIEDGKIAIVESPTGTGK 57
>gi|296481054|tpg|DAA23169.1| TPA: regulator of telomere elongation helicase 1 [Bos taurus]
Length = 583
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|393904464|gb|EFO17178.2| hypothetical protein LOAG_11323 [Loa loa]
Length = 449
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
S FPF+ Y+ Q FM+ + L + ESPTGTGK+L L+C + + D+K
Sbjct: 9 STVEFPFEPYECQIKFMEKVVEALWTGQNAALESPTGTGKTLCLLCAAIAFLKDYK 64
>gi|426392493|ref|XP_004062584.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 3
[Gorilla gorilla gorilla]
Length = 1301
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|351714866|gb|EHB17785.1| Regulator of telomere elongation helicase 1, partial
[Heterocephalus glaber]
Length = 1184
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYQCQQEYMSKVLECLQKKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|328871465|gb|EGG19835.1| DEAD/DEAH box helicase [Dictyostelium fasciculatum]
Length = 1125
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP++ YD Q+ M + + + + ES TGTGK+LSL+C L+W
Sbjct: 119 FPYEPYDTQATMMHRILEACEKGQNALLESATGTGKTLSLLCATLEW 165
>gi|307108452|gb|EFN56692.1| hypothetical protein CHLNCDRAFT_57565 [Chlorella variabilis]
Length = 1523
Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
FP AY +Q +FM + L+ + E+PTG+GK+LSL+C L W K
Sbjct: 13 FPHKAYGVQLSFMNKVIAALEGGHNALLEAPTGSGKTLSLLCSALAWQVREK 64
>gi|402881970|ref|XP_003904529.1| PREDICTED: regulator of telomere elongation helicase 1 [Papio
anubis]
Length = 1301
Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|323510681|ref|NP_116575.3| regulator of telomere elongation helicase 1 isoform 2 [Homo
sapiens]
Length = 1243
Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|431894622|gb|ELK04422.1| Regulator of telomere elongation helicase 1 [Pteropus alecto]
Length = 1198
Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L G+ ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMAKVLECLQKKVNGVLESPTGTGKTLCLLCTTLAW 59
>gi|395531830|ref|XP_003767976.1| PREDICTED: Fanconi anemia group J protein-like [Sarcophilus
harrisii]
Length = 281
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 58 FPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 104
>gi|323454890|gb|EGB10759.1| hypothetical protein AURANDRAFT_62227 [Aureococcus anophagefferens]
Length = 1120
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
+ P EFPF D Y Q +FM +D I ESPTGTGK+L L+ L W H
Sbjct: 119 DTPVEFPF--DPYACQLDFMDKALGAVDAGTSAILESPTGTGKTLCLLVSTLAWAKRH 174
>gi|350590580|ref|XP_003483097.1| PREDICTED: Fanconi anemia group J protein-like [Sus scrofa]
Length = 801
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|7706541|ref|NP_057518.1| regulator of telomere elongation helicase 1 isoform 1 [Homo
sapiens]
gi|229462743|sp|Q9NZ71.2|RTEL1_HUMAN RecName: Full=Regulator of telomere elongation helicase 1;
AltName: Full=Novel helicase-like
gi|6969265|gb|AAF33687.1|AF217795_1 helicase-like protein NHL [Homo sapiens]
gi|119595644|gb|EAW75238.1| hCG22751, isoform CRA_a [Homo sapiens]
gi|119595645|gb|EAW75239.1| hCG22751, isoform CRA_a [Homo sapiens]
gi|119595647|gb|EAW75241.1| hCG22751, isoform CRA_a [Homo sapiens]
Length = 1219
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|410219260|gb|JAA06849.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
gi|410263662|gb|JAA19797.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
Length = 1220
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|332858954|ref|XP_003317100.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Pan troglodytes]
gi|410301716|gb|JAA29458.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
gi|410341613|gb|JAA39753.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
Length = 1220
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|426392491|ref|XP_004062583.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 2
[Gorilla gorilla gorilla]
Length = 1244
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|281208566|gb|EFA82742.1| DEAD/DEAH box helicase [Polysphondylium pallidum PN500]
Length = 997
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y+ QS M + L + ES TGTGK+LSL+C L+W
Sbjct: 152 FPFQPYECQSTMMHQILEALKGGHNALLESATGTGKTLSLLCATLEW 198
>gi|384251189|gb|EIE24667.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 827
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
M++LY L G+ ESPTGTGK+LSLIC L+W D
Sbjct: 1 MQHLYSVLQTGGVGLLESPTGTGKTLSLICSTLQWLED 38
>gi|426392489|ref|XP_004062582.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Gorilla gorilla gorilla]
Length = 1220
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|169806052|ref|XP_001827771.1| DNA repair helicase [Enterocytozoon bieneusi H348]
gi|161779057|gb|EDQ31083.1| DNA repair helicase [Enterocytozoon bieneusi H348]
Length = 579
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
FP++ YDIQ+ F+ + + + K GIF SPTGTGK++SL+
Sbjct: 6 FPYELYDIQNQFIDDAIKVISDGKIGIFSSPTGTGKTISLL 46
>gi|397477198|ref|XP_003809965.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Pan paniscus]
Length = 1090
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|410980592|ref|XP_003996661.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Felis catus]
Length = 1230
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKS++L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSVALLCSALAW 63
>gi|261188545|ref|XP_002620687.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis
SLH14081]
gi|239593171|gb|EEQ75752.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis
SLH14081]
Length = 851
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTG 61
++ V F P+ YDIQS FM+ LY ++ +K GIFESPT G
Sbjct: 1 MSSVEKNFHHPYSPYDIQSQFMQALYDCIEEAKVGIFESPTADG 44
>gi|26379597|dbj|BAC25422.1| unnamed protein product [Mus musculus]
Length = 87
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 63
>gi|340717629|ref|XP_003397282.1| PREDICTED: Fanconi anemia group J protein homolog [Bombus
terrestris]
Length = 976
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGL--EK 84
P Y Q M L + + ESPTG+GK+L+L+CG+L W +DH + + +K
Sbjct: 212 LPVKPYSCQVAVMNQLIQGCIKQENCLLESPTGSGKTLALLCGVLAW-HDHHVAEVQNQK 270
Query: 85 IEAKIKD 91
+E +I++
Sbjct: 271 LEKQIQE 277
>gi|426347251|ref|XP_004041270.1| PREDICTED: Fanconi anemia group J protein-like, partial [Gorilla
gorilla gorilla]
Length = 491
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|119595649|gb|EAW75243.1| hCG22751, isoform CRA_d [Homo sapiens]
Length = 1023
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|240279284|gb|EER42789.1| DEAD_2 protein [Ajellomyces capsulatus H143]
Length = 119
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 24/36 (66%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
F PF YDIQ FM+ LY ++ K GIFESPTGT
Sbjct: 8 FHHPFIPYDIQRQFMQALYDCIEGGKVGIFESPTGT 43
>gi|297462303|ref|XP_002702129.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Bos taurus]
Length = 1232
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 16 FPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 62
>gi|148675458|gb|EDL07405.1| regulator of telomere elongation helicase 1 [Mus musculus]
Length = 1273
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|50726319|dbj|BAD33894.1| putative BRCA1 interacting protein C-terminal helicase 1 [Oryza
sativa Japonica Group]
Length = 1366
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKW 73
VP EFP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W
Sbjct: 30 VPVEFPY--KPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAW 85
>gi|348554129|ref|XP_003462878.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Cavia porcellus]
Length = 1250
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYHCQQEYMSKVLECLQKKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|239613258|gb|EEQ90245.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis ER-3]
gi|327357445|gb|EGE86302.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis ATCC
18188]
Length = 851
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTG 61
++ V F P+ YDIQS FM+ LY ++ +K GIFESPT G
Sbjct: 1 MSSVEKNFHHPYTPYDIQSQFMQALYDCIEEAKVGIFESPTADG 44
>gi|260808249|ref|XP_002598920.1| hypothetical protein BRAFLDRAFT_79851 [Branchiostoma floridae]
gi|229284195|gb|EEN54932.1| hypothetical protein BRAFLDRAFT_79851 [Branchiostoma floridae]
Length = 1352
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP +AY Q M + L+ + + ESPTG+GKSL+L+C L W
Sbjct: 20 FPCNAYPTQIAMMHKILQGLEREQNCLLESPTGSGKSLALLCSCLAW 66
>gi|426238589|ref|XP_004013233.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Ovis aries]
Length = 1234
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 15 FPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 61
>gi|356547406|ref|XP_003542103.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Glycine max]
Length = 1001
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP++AY+ Q +M + +L + ESPTGTGK+L L+C L W
Sbjct: 13 FPYEAYESQLVYMDKVIQSLQEKCNALLESPTGTGKTLCLLCATLAW 59
>gi|38707224|gb|AAR27230.1| DEAH helicase isoform 4 [Mus spretus]
Length = 1165
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|395829361|ref|XP_003787828.1| PREDICTED: regulator of telomere elongation helicase 1 [Otolemur
garnettii]
Length = 1303
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFRPYRCQQEYMTKVLECLQKRVNGILESPTGTGKTLCLLCTTLAW 59
>gi|334322387|ref|XP_001363088.2| PREDICTED: Fanconi anemia group J protein [Monodelphis domestica]
Length = 1179
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLALMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|262263445|ref|NP_001160138.1| regulator of telomere elongation helicase 1 isoform 3 [Mus
musculus]
Length = 1170
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|402471474|gb|EJW05200.1| hypothetical protein EDEG_00732 [Edhazardia aedis USNM 41457]
Length = 1186
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 28 PFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY 74
P+ YDIQ +F++ L K GIF SPTGTGK+LSL+ LK++
Sbjct: 5 PYKLYDIQKDFIEKAIKILKTGKIGIFSSPTGTGKTLSLLTS-LKYF 50
>gi|320165278|gb|EFW42177.1| DNA repair helicase [Capsaspora owczarzaki ATCC 30864]
Length = 1329
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q M+ + L++ + + ESPTGTGKSL+L+C L W
Sbjct: 114 FPFPPYPTQLTMMQKVIQALESKQNALLESPTGTGKSLTLLCSALAW 160
>gi|262263447|ref|NP_001160139.1| regulator of telomere elongation helicase 1 isoform 4 [Mus
musculus]
gi|219521615|gb|AAI44978.1| Rtel1 protein [Mus musculus]
Length = 1164
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|38707226|gb|AAR27231.1| DEAH helicase isoform 5 [Mus spretus]
Length = 1170
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|38707238|gb|AAR27237.1| DEAH helicase isoform 5 [Mus musculus]
Length = 1170
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|38707236|gb|AAR27236.1| DEAH helicase isoform 3 [Mus musculus]
Length = 1164
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|38707222|gb|AAR27229.1| DEAH helicase isoform 3 [Mus spretus]
Length = 1164
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|262263441|ref|NP_001001882.3| regulator of telomere elongation helicase 1 isoform 1 [Mus
musculus]
Length = 1209
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|440491198|gb|ELQ73865.1| Helicase of the DEAD superfamily, partial [Trachipleistophora
hominis]
Length = 867
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY 74
FPF Y Q + L N K GI ESPTGTGKS++++C +L W+
Sbjct: 16 FPFKPYPAQILTCSKIIDCLKNKKTGIIESPTGTGKSIAILCAVLAWH 63
>gi|344254979|gb|EGW11083.1| Regulator of telomere elongation helicase 1 [Cricetulus griseus]
Length = 1225
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|262263443|ref|NP_001160137.1| regulator of telomere elongation helicase 1 isoform 2 [Mus
musculus]
gi|229891754|sp|Q0VGM9.2|RTEL1_MOUSE RecName: Full=Regulator of telomere elongation helicase 1
gi|148878220|gb|AAI45659.1| Rtel1 protein [Mus musculus]
gi|219519260|gb|AAI44979.1| Rtel1 protein [Mus musculus]
Length = 1203
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|50510779|dbj|BAD32375.1| mKIAA1088 protein [Mus musculus]
Length = 1211
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 15 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 61
>gi|297609925|ref|NP_001063870.2| Os09g0551800 [Oryza sativa Japonica Group]
gi|255679120|dbj|BAF25784.2| Os09g0551800 [Oryza sativa Japonica Group]
Length = 1187
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKW 73
VP EFP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W
Sbjct: 30 VPVEFPY--KPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAW 85
>gi|196012030|ref|XP_002115878.1| hypothetical protein TRIADDRAFT_30066 [Trichoplax adhaerens]
gi|190581654|gb|EDV21730.1| hypothetical protein TRIADDRAFT_30066 [Trichoplax adhaerens]
Length = 995
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q + M + L K + ESPTG+GKSL+L+C L W
Sbjct: 29 FPYKAYPSQLSMMSKIIQGLQQRKHCLLESPTGSGKSLALLCSALAW 75
>gi|46452191|gb|AAS98192.1| DEAH helicase isoform 1 [Mus spretus]
Length = 1209
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|81872267|sp|Q6H1L8.1|RTEL1_MUSSP RecName: Full=Regulator of telomere elongation helicase 1
gi|38707220|gb|AAR27228.1| DEAH helicase isoform 2 [Mus spretus]
Length = 1203
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|354481991|ref|XP_003503184.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1-like [Cricetulus griseus]
Length = 1259
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|149033944|gb|EDL88727.1| similar to helicase-like protein NHL isoform 2 [Rattus
norvegicus]
Length = 1264
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|224076637|ref|XP_002196566.1| PREDICTED: Fanconi anemia group J protein homolog [Taeniopygia
guttata]
Length = 1249
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M + L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNAIVKGLNSRQHCLLESPTGSGKSLALLCSALSW 63
>gi|111493941|gb|AAI05579.1| Rtel1 protein [Mus musculus]
Length = 1203
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|38707234|gb|AAR27235.1| DEAH helicase isoform 2 [Mus musculus]
Length = 1203
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|38707232|gb|AAR27234.1| DEAH helicase isoform 1 [Mus musculus]
Length = 1209
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|344285337|ref|XP_003414418.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J
protein-like [Loxodonta africana]
Length = 1240
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M + L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNCIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|262263449|ref|NP_001160140.1| regulator of telomere elongation helicase 1 isoform 5 [Mus
musculus]
Length = 1128
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|38707228|gb|AAR27232.1| DEAH helicase isoform 6 [Mus spretus]
Length = 1128
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|38707240|gb|AAR27238.1| DEAH helicase isoform 6 [Mus musculus]
Length = 1128
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|256091116|ref|XP_002581482.1| regulator of telomere elongation helicase 1 rtel1 [Schistosoma
mansoni]
Length = 61
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
FP Y Q + M + +L+N + + ESPTGTGK+LSL+C L W K
Sbjct: 9 FPHKPYGCQMSMMTRVIESLENKQNCLLESPTGTGKTLSLLCASLGWLEKRK 60
>gi|300797873|ref|NP_001178786.1| regulator of telomere elongation helicase 1 [Rattus norvegicus]
gi|229891752|sp|Q5RJZ1.2|RTEL1_RAT RecName: Full=Regulator of telomere elongation helicase 1
Length = 1274
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|410928893|ref|XP_003977834.1| PREDICTED: Fanconi anemia group J protein homolog [Takifugu
rubripes]
Length = 1109
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L+ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPRKAYPSQLAMMNSIIRGLNTGQHCLLESPTGSGKSLALLCSTLGW 63
>gi|414886610|tpg|DAA62624.1| TPA: hypothetical protein ZEAMMB73_124196 [Zea mays]
Length = 1167
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKW 73
VP EFP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W
Sbjct: 37 VPVEFPY--KPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAW 92
>gi|348567428|ref|XP_003469501.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J
protein-like [Cavia porcellus]
Length = 1209
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M + L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNCIVRGLNSRQHCLLESPTGSGKSLALLCSALAW 63
>gi|194387848|dbj|BAG61337.1| unnamed protein product [Homo sapiens]
Length = 1004
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTG++L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGRTLCLLCTTLAW 59
>gi|407410515|gb|EKF32919.1| helicase, putative [Trypanosoma cruzi marinkellei]
Length = 951
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y Q +M+ + L+ + ESPTGTGK+L L+C +L W
Sbjct: 13 FPFNPYPAQVEYMRAVIDALNGRCNALLESPTGTGKTLCLLCSVLAW 59
>gi|350407679|ref|XP_003488158.1| PREDICTED: Fanconi anemia group J protein-like [Bombus impatiens]
Length = 959
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
P Y Q M L + + ESPTG+GK+L+L+CG+L W +DH +
Sbjct: 212 LPVKPYSCQVAVMNQLIQGCIKQENCLLESPTGSGKTLALLCGVLAW-HDHHV 263
>gi|148232300|ref|NP_001083272.1| BRCA1 interacting protein C-terminal helicase 1 [Xenopus laevis]
gi|37747678|gb|AAH60014.1| MGC68622 protein [Xenopus laevis]
Length = 713
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L+ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCRAYPSQLAMMNSIMRGLNCKQHCLLESPTGSGKSLALLCSALAW 63
>gi|429329870|gb|AFZ81629.1| DNA repair helicase, putative [Babesia equi]
Length = 956
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
E FP+ Y Q +M+ + + N K + ESPTGTGK+LSLIC L ++K
Sbjct: 15 EVRFPYPPYQSQKLYMEAVIKAVKNGKNALLESPTGTGKTLSLICSSLACLLNNK 69
>gi|303289303|ref|XP_003063939.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454255|gb|EEH51561.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 770
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
M++LY L GIFESPTGTGK+LS +C L+W
Sbjct: 1 MRSLYDVLRRGGIGIFESPTGTGKTLSTLCAALQW 35
>gi|300707205|ref|XP_002995821.1| hypothetical protein NCER_101193 [Nosema ceranae BRL01]
gi|239605041|gb|EEQ82150.1| hypothetical protein NCER_101193 [Nosema ceranae BRL01]
Length = 695
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP++ Y+ Q M+ + + G+ ESPTGTGKSLS++C +L +
Sbjct: 13 FPYEPYESQKQTMEKILTCMMEGSTGMIESPTGTGKSLSILCAVLAY 59
>gi|307177075|gb|EFN66343.1| Fanconi anemia group J protein [Camponotus floridanus]
Length = 345
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP + Y Q M +L + + ESPTG+GK+L+L+CG L W
Sbjct: 280 FPVEPYPCQKAVMNSLIKGCTKEQHCLLESPTGSGKTLALLCGALAW 326
>gi|357159919|ref|XP_003578599.1| PREDICTED: uncharacterized protein LOC100829852 [Brachypodium
distachyon]
Length = 1225
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKW 73
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W
Sbjct: 39 FPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAW 90
>gi|380021224|ref|XP_003694471.1| PREDICTED: Fanconi anemia group J protein homolog, partial [Apis
florea]
Length = 878
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
P Y Q M L + + ESPTG+GK+L+L+CG+L W +DH I
Sbjct: 161 LPVKPYSCQIAVMNKLIQGCVKGENCLLESPTGSGKTLALLCGVLAW-HDHYI 212
>gi|383856223|ref|XP_003703609.1| PREDICTED: Fanconi anemia group J protein-like [Megachile
rotundata]
Length = 935
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
FP Y Q M + S+ + ESPTGTGK+L+L+C +L W+ H
Sbjct: 204 FPAKPYSCQMAVMNKVIQGCVKSENCLLESPTGTGKTLALLCSVLAWHDHH 254
>gi|324503421|gb|ADY41490.1| Regulator of telomere elongation helicase 1 [Ascaris suum]
Length = 993
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP++ YD Q +M+ + TL S ESPTGTGK+L L+C + +
Sbjct: 13 FPYEPYDCQLLYMEKVIETLKRSFNAALESPTGTGKTLCLLCATIAF 59
>gi|302799956|ref|XP_002981736.1| hypothetical protein SELMODRAFT_9067 [Selaginella moellendorffii]
gi|300150568|gb|EFJ17218.1| hypothetical protein SELMODRAFT_9067 [Selaginella moellendorffii]
Length = 65
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTL-------DNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q FM + TL D + ESPTG+GKSLSL+C L W
Sbjct: 10 FPYRAYGSQLAFMGKVITTLERAFRDPDGHCNALLESPTGSGKSLSLLCAALAW 63
>gi|242050104|ref|XP_002462796.1| hypothetical protein SORBIDRAFT_02g032150 [Sorghum bicolor]
gi|241926173|gb|EER99317.1| hypothetical protein SORBIDRAFT_02g032150 [Sorghum bicolor]
Length = 1153
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKW 73
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W
Sbjct: 35 FPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAW 86
>gi|124088740|ref|XP_001347217.1| Helicase [Paramecium tetraurelia strain d4-2]
gi|50057606|emb|CAH03590.1| Helicase, putative [Paramecium tetraurelia]
Length = 703
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 17/103 (16%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNS---------KFGIFESPTGTGKSLSLICGIL 71
+ S++PFP Y Q + K++Y +L K IFESPTGTGKS +LI G L
Sbjct: 13 IKSQYPFP--PYQSQLDLSKDIYVSLAQGTKVQMYMIVKVSIFESPTGTGKSYALIEGAL 70
Query: 72 KWYYDHKIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKM 114
+ D K L K++ K + + DW + ELK+
Sbjct: 71 NYLEDIKSNTLIKVKQK------CQIDDGMPDWFNEPDVELKL 107
>gi|409078986|gb|EKM79348.1| hypothetical protein AGABI1DRAFT_58886 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 867
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 20 EVPSEFP-FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGK 62
E P FP FP+D Y IQ++ M++LY +++ I ESPTGTGK
Sbjct: 6 ETPDVFPAFPYDLPYPIQTDLMRHLYDAIESRCISIVESPTGTGK 50
>gi|219110231|ref|XP_002176867.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411402|gb|EEC51330.1| predicted protein, partial [Phaeodactylum tricornutum CCAP
1055/1]
Length = 791
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M+ + L S+ + ESPTGTGK+L L+C L W
Sbjct: 48 FPFRPYKCQETYMEKVLDALLRSENALLESPTGTGKTLCLLCSTLAW 94
>gi|426195896|gb|EKV45825.1| histidine phosphotransfer protein [Agaricus bisporus var.
bisporus H97]
Length = 863
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 20 EVPSEFP-FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGK 62
E P FP FP+D Y IQ++ M++LY +++ I ESPTGTGK
Sbjct: 6 ETPDVFPAFPYDPPYPIQTDLMRHLYDAIESRCISIVESPTGTGK 50
>gi|123437769|ref|XP_001309677.1| helicase [Trichomonas vaginalis G3]
gi|121891414|gb|EAX96747.1| helicase, putative [Trichomonas vaginalis G3]
Length = 859
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 45 TLDNSKFGIFESPTGTGKSLSLICGILKW----YYDHKIVGLEKIEAKIKDL 92
+N KF + ESPTGTGK+LSL+C L W +Y +IV + +++ ++
Sbjct: 7 ACENGKFALLESPTGTGKTLSLLCSTLAWKEQTHYRCQIVYSSRTHSQLSNV 58
>gi|169806602|ref|XP_001828045.1| DNA repair helicase [Enterocytozoon bieneusi H348]
gi|161779173|gb|EDQ31197.1| DNA repair helicase [Enterocytozoon bieneusi H348]
Length = 670
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ Y Q M+ + + +SK + ESPTGTGKSL+++C ++ +
Sbjct: 13 FPYKPYPAQIQTMETMLKSFGSSKCALIESPTGTGKSLAILCAVMGY 59
>gi|194379638|dbj|BAG63785.1| unnamed protein product [Homo sapiens]
Length = 1243
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 25/47 (53%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI SPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILGSPTGTGKTLCLLCTTLAW 59
>gi|253742830|gb|EES99497.1| TFIIH basal transcription factor complex helicase subunit
[Giardia intestinalis ATCC 50581]
Length = 1060
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
EF FPF+ Y Q +M +L L+ + + ESPTGTGK+LSL+ L +
Sbjct: 11 EFQFPFEPYPSQIEYMNSLITALNGKENALLESPTGTGKTLSLLIPALAY 60
>gi|145345288|ref|XP_001417148.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577375|gb|ABO95441.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 938
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP + + Q+ M ++ L + + ESPTGTGK+L+L+CG L W
Sbjct: 134 FPEGLNPHPAQTMTMSSIIRALTKREHAMIESPTGTGKTLALLCGALAW 182
>gi|429327451|gb|AFZ79211.1| hypothetical protein BEWA_020580 [Babesia equi]
Length = 1094
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 20/97 (20%)
Query: 35 QSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD----------------HK 78
Q + L Y L + + ESPTGTGK+ ++I G+L W Y +K
Sbjct: 224 QLQILSKLIYALKTNGHAVLESPTGTGKTAAIISGVLSWLYQSQITNTEDESANSEPKYK 283
Query: 79 IVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMR 115
++ L + A+IK + + T+ + QS L R
Sbjct: 284 VIYLTRTHAQIKQI----STTIDQSCFRPQSCTLASR 316
>gi|322706322|gb|EFY97903.1| DEAD-2 domain-containing protein [Metarhizium anisopliae ARSEF 23]
Length = 924
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 72/187 (38%), Gaps = 65/187 (34%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGT--------------------- 60
+F P+ Y +Q FM+ +Y LD + GI ESPTGT
Sbjct: 20 DFHHPYTPYAVQEQFMRTVYDILDKGEGQVGILESPTGTVCDTFPSMVGIACTWALMTMT 79
Query: 61 --------GKSLSLICGILKWYYDHKIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFEL 112
GKSLSLIC L W + K E+
Sbjct: 80 RLATHTLQGKSLSLICASLTWLRNFK----------------------------SNKVEV 111
Query: 113 KMRNQIDALKDALKSQKTYDELIENIRKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSK 172
M+N DA KD + D+L+ R++ +R + D+E ++ A+ + + E +
Sbjct: 112 SMQNAGDAYKD--EPAWLVDQLLRRKREELVQRWE----DREKRLEAIRLKEKALEDRGR 165
Query: 173 EKRKEEE 179
++R+ EE
Sbjct: 166 KRRRLEE 172
>gi|390345521|ref|XP_781875.3| PREDICTED: Fanconi anemia group J protein-like
[Strongylocentrotus purpuratus]
Length = 1704
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q + M + ++ + + ESPTG+GKSL+L+C L W
Sbjct: 45 FPCKAYPTQLSMMSMIIKGINRRQNCLLESPTGSGKSLALLCSSLAW 91
>gi|156089201|ref|XP_001612007.1| DNA repair helicase (rad3) family protein [Babesia bovis]
gi|154799261|gb|EDO08439.1| DNA repair helicase (rad3) family protein [Babesia bovis]
Length = 948
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 66/125 (52%), Gaps = 14/125 (11%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILK--WYYDHKIVG 81
E FP+ Y+ Q+ +M+ + + + K + ESPTGTGK+LSLIC L W+ K
Sbjct: 15 EVRFPYTPYENQTVYMETVIKAVRHGKNALLESPTGTGKTLSLICSTLACIWHTRFK--- 71
Query: 82 LEKIEAKIKDLEISKNETVSE------DWIEQQSFELKMRNQIDALKDALKSQKTYDELI 135
++ +K ++ + E + + D I+Q+ +K + L+ L + +T+++L
Sbjct: 72 -DETSFNLKPVQTTSEEGLMKTMQDLRDSIQQKKTIVKFKGS-KKLR-ILYASRTHNQLK 128
Query: 136 ENIRK 140
+ IR+
Sbjct: 129 QVIRE 133
>gi|378755955|gb|EHY65980.1| hypothetical protein NERG_00676 [Nematocida sp. 1 ERTm2]
Length = 662
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
E+ +F P + Y Q +F+K+ + N++ GI ESPTGTGK+LS + +++ D +
Sbjct: 29 EIKDKFNLPHELYQGQKDFIKDATEIIRNNRLGILESPTGTGKTLSSLITAMEYLGDSEF 88
Query: 80 V--GLEKIEA 87
+ G+ K A
Sbjct: 89 ITEGVSKANA 98
>gi|46981234|gb|AAT07552.1| unknown protein [Oryza sativa Japonica Group]
Length = 845
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 39 MKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYYDHK 78
M LY L + + ESPTGTGK+LS+IC L+W DH+
Sbjct: 1 MSFLYGALSSGPGALALLESPTGTGKTLSIICSALQWLVDHR 42
>gi|391337516|ref|XP_003743113.1| PREDICTED: Fanconi anemia group J protein-like [Metaseiulus
occidentalis]
Length = 567
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Query: 16 RPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYY 75
PL + FP+ + Y Q M L L K + ESPTGTGKSLSL+C L +
Sbjct: 14 HPLGGLKVLFPYE-NPYPQQKVMMSRLITALKQKKNCLLESPTGTGKSLSLLCAALAFCE 72
Query: 76 DHKIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFEL-KMRNQIDALKDALKSQKTYDEL 134
D K + +E K D K E S +E EL K ++ +D YD+
Sbjct: 73 DEKRKHRKGLE-KFPDGLPPKAEESSHSLLEP---ELPKTKSVMD----------MYDD- 117
Query: 135 IENIRKQNEKRKKSLRNDQ 153
E ++ NE KSL N++
Sbjct: 118 -ECVKPHNESASKSLLNEK 135
>gi|340503511|gb|EGR30093.1| regulator of telomere elongation helicase 1, putative
[Ichthyophthirius multifiliis]
Length = 671
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 4 KTPNEDKEFNEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
K P E + + Q + + FP+ Y Q +M + +L+ + +SPTGTGK+
Sbjct: 28 KIPIEKRIMSNQHLITIDGIDIYFPYRPYPQQIMYMSKVIQSLNQGNNSLLQSPTGTGKT 87
Query: 64 LSLICGILKW 73
L L+C + W
Sbjct: 88 LCLLCATIAW 97
>gi|146176235|ref|XP_001019889.2| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila]
gi|146144664|gb|EAR99644.2| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila SB210]
Length = 597
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 9 DKEFNEQRPLAEVPSE-FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
D E + Q+ + E+ + FP+P + Y IQ MK++ +L K +F+SPTGTGK+L I
Sbjct: 41 DAEKDIQQNILEICLQIFPYP-EPYSIQIESMKSIIKSLCEKKNLLFQSPTGTGKTLVTI 99
Query: 68 CGILKW 73
C L +
Sbjct: 100 CSALAY 105
>gi|399218668|emb|CCF75555.1| unnamed protein product [Babesia microti strain RI]
Length = 838
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%)
Query: 14 EQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E+ ++ + + FP+ Y+ Q ++ + +++ + + ESPTGTGK+L L+C L +
Sbjct: 2 EKNVVSVLGIDVQFPYKIYEPQKLLIEAIIRSIEYGQNALIESPTGTGKTLCLLCASLAY 61
Query: 74 YYDHKIVGLEKI 85
D +I GL+ I
Sbjct: 62 LCDKRIPGLKII 73
>gi|407849947|gb|EKG04513.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y Q +M+ + L+ + ESPTGTGK+L L+C L W
Sbjct: 13 FPFNPYPAQVEYMRAVIDALNGRCNALLESPTGTGKTLCLLCSALAW 59
>gi|322781255|gb|EFZ10173.1| hypothetical protein SINV_12884 [Solenopsis invicta]
Length = 884
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y +Q +MK + L NS+ G+ ESPTGTGK+
Sbjct: 13 FPFKPYPVQLEYMKKVIECLQNSQHGVLESPTGTGKT 49
>gi|168030243|ref|XP_001767633.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681162|gb|EDQ67592.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1378
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKF--------GIFESPTGTGKSLSLICGILKW 73
FP+ Y Q FM + L+ S+ + ESPTG+GK+L+L+C L W
Sbjct: 17 FPYKPYGTQLAFMGKVLAALEQSRHSHRSCSVNALLESPTGSGKTLALLCATLAW 71
>gi|302768379|ref|XP_002967609.1| hypothetical protein SELMODRAFT_408754 [Selaginella
moellendorffii]
gi|300164347|gb|EFJ30956.1| hypothetical protein SELMODRAFT_408754 [Selaginella
moellendorffii]
Length = 1004
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTL-------DNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
FP+ AY Q FM + TL D + ESPTG+GKSLSL+C L W H++
Sbjct: 17 FPYRAYGSQLAFMGKVITTLERAFRDPDGHCNALLESPTGSGKSLSLLCAALAW-QQHRM 75
Query: 80 VGLEKI 85
V I
Sbjct: 76 VAAASI 81
>gi|168063226|ref|XP_001783574.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664903|gb|EDQ51606.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 858
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 23/38 (60%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
M +Y L I ESPTGTGK+LSLIC L+W D
Sbjct: 1 MNVVYRALQKGGVCIVESPTGTGKTLSLICSALQWLQD 38
>gi|380013392|ref|XP_003690744.1| PREDICTED: regulator of telomere elongation helicase 1 homolog,
partial [Apis florea]
Length = 970
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y IQ +M + L NSK G+ ESPTGTGK+
Sbjct: 13 FPFKPYSIQEEYMAKVIQCLQNSKNGVLESPTGTGKT 49
>gi|328783139|ref|XP_396001.4| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Apis mellifera]
Length = 976
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y IQ +M + L NSK G+ ESPTGTGK+
Sbjct: 13 FPFKPYSIQEEYMAKVIQCLQNSKNGVLESPTGTGKT 49
>gi|308802574|ref|XP_003078600.1| Helicase of the DEAD superfamily (ISS) [Ostreococcus tauri]
gi|116057053|emb|CAL51480.1| Helicase of the DEAD superfamily (ISS) [Ostreococcus tauri]
Length = 970
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
+FP D + Q M + TL + + ESPTGTGK+L+L+CG L W +K+
Sbjct: 110 KFPEGLDPHPAQMMTMSTIIRTLTRKEHAMIESPTGTGKTLALLCGALAWQEKNKV 165
>gi|428173640|gb|EKX42541.1| hypothetical protein GUITHDRAFT_111516 [Guillardia theta
CCMP2712]
Length = 1115
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FP Y Q M + L N K + E PTG+GKSLSL+C + W
Sbjct: 18 CEVNFPHTPYSSQLAMMDKTIFALRNEKNVLLELPTGSGKSLSLLCAVSAW 68
>gi|162462746|ref|NP_001104820.1| FancJ-like protein [Bombyx mori]
gi|161339205|dbj|BAF94023.1| FancJ-like protein [Bombyx mori]
Length = 851
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
P + Y Q + + T+ ++ + ESPTG+GK+L+L+CG L W
Sbjct: 73 LPVNPYGTQKALIHQVIKTIKAAQNCLLESPTGSGKTLALLCGTLAW 119
>gi|402581791|gb|EJW75738.1| hypothetical protein WUBG_13354, partial [Wuchereria bancrofti]
Length = 93
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
FPF+ Y Q FM+ + L + ESPTGTGK+L L+C + + K+
Sbjct: 23 FPFEPYQCQIKFMEKVMEALQMRQNAALESPTGTGKTLCLLCATIAYLKHCKL 75
>gi|197098236|ref|NP_001124929.1| regulator of telomere elongation helicase 1 [Pongo abelii]
gi|75042437|sp|Q5RE34.1|RTEL1_PONAB RecName: Full=Regulator of telomere elongation helicase 1
gi|55726407|emb|CAH89973.1| hypothetical protein [Pongo abelii]
Length = 1302
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 25/47 (53%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ES TGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESHTGTGKTLCLLCTTLAW 59
>gi|403361448|gb|EJY80425.1| ATP-dependent RNA helicase Chl1, putative [Oxytricha trifallax]
Length = 779
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 27/130 (20%)
Query: 39 MKNLYYTLDN-SKFGIFESPTGT------------GKSLSLICGILKWYYDHKIVGLEKI 85
M +Y TL K G+FESPTGT GKSLSL+C IL WY +G +K
Sbjct: 1 MDKIYDTLSQEKKIGLFESPTGTVIKKYIRLNFIQGKSLSLVCAILTWY-----LGKDK- 54
Query: 86 EAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDA--LKSQKTYDELIEN-IR--K 140
+ K + +I K+ +DW+ F + N++ L ++ + L N IR +
Sbjct: 55 QVKCEKSDIKKDAK-EDDWLSM--FGAPVTNEVSNKPQVRNLNQKRVFKNLNSNDIREVQ 111
Query: 141 QNEKRKKSLR 150
QN KRKK R
Sbjct: 112 QNLKRKKEAR 121
>gi|156088687|ref|XP_001611750.1| hypothetical protein [Babesia bovis T2Bo]
gi|154799004|gb|EDO08182.1| hypothetical protein BBOV_III006210 [Babesia bovis]
Length = 1062
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 15 QRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY 74
QR + V F FP Q + L + L NS+ + ESPTGTGK+ +++ G+ W
Sbjct: 198 QRNIGGVQVLFHFP-TMQKPQIQLLAKLMHALKNSQHVVLESPTGTGKTAAILAGVFSWM 256
Query: 75 YDHKI 79
+ + I
Sbjct: 257 FQNHI 261
>gi|71413416|ref|XP_808847.1| helicase [Trypanosoma cruzi strain CL Brener]
gi|70873137|gb|EAN86996.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y Q +M+ + L + ESPTGTGK+L L+C L W
Sbjct: 13 FPFNPYPAQVEYMRAVIDALKGRCNALLESPTGTGKTLCLLCSALAW 59
>gi|134107760|ref|XP_777491.1| hypothetical protein CNBB0650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260183|gb|EAL22844.1| hypothetical protein CNBB0650 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 883
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 17 PLAEVPSEFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIF---ESPTGTGK 62
P P FPFP+ YDIQ + M+ ++ +++ K I ESPTGTGK
Sbjct: 11 PCLPTPETFPFPYPKPYDIQLDLMRVVFRAIEDGKIAIIGQVESPTGTGK 60
>gi|392577022|gb|EIW70152.1| hypothetical protein TREMEDRAFT_29466 [Tremella mesenterica DSM
1558]
Length = 840
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 17 PLAEVPSEFPFPF-DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
P P F FP+ YDIQ M+ ++ L++ K I ESPTGTGKS
Sbjct: 11 PSLPTPDRFEFPYAKPYDIQVELMRTVFRALEDGKIAIVESPTGTGKS 58
>gi|412990074|emb|CCO20716.1| predicted protein [Bathycoccus prasinos]
Length = 1018
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 2 ASKTPNEDKEFNEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTG 61
A++ P+ F P+ +P FP Q M + L + + ESPTGTG
Sbjct: 150 ATQRPDSSNTF----PMMGIPVAFPKGLTPLIPQKIVMSKVLQALKTKQHALVESPTGTG 205
Query: 62 KSLSLICGILKW 73
KSL+L+C L +
Sbjct: 206 KSLALLCASLAF 217
>gi|312102845|ref|XP_003150011.1| hypothetical protein LOAG_14466 [Loa loa]
Length = 203
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPT 58
+EF FPF+ YDIQ + M+ + ++ K GI ESPT
Sbjct: 2 AEFLFPFEPYDIQVSLMRTIISCINEGKIGILESPT 37
>gi|71660707|ref|XP_822069.1| helicase [Trypanosoma cruzi strain CL Brener]
gi|70887462|gb|EAO00218.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y Q +M+ + L + ESPTGTGK+L L+C L W
Sbjct: 13 FPFNPYPAQVEYMRAVIDALKGRCNALLESPTGTGKTLCLLCSALAW 59
>gi|393904883|gb|EFO14058.2| hypothetical protein LOAG_14466 [Loa loa]
Length = 213
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPT 58
+EF FPF+ YDIQ + M+ + ++ K GI ESPT
Sbjct: 2 AEFLFPFEPYDIQVSLMRTIISCINEGKIGILESPT 37
>gi|332030654|gb|EGI70342.1| Regulator of telomere elongation helicase 1-like protein
[Acromyrmex echinatior]
Length = 976
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y +Q +MK + L N + G+ ESPTGTGK+
Sbjct: 13 FPFKPYPVQEEYMKKVIECLQNGQHGVLESPTGTGKT 49
>gi|299470612|emb|CBN80234.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 301
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 27 FPFDAYDI-QSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
FPF+ + Q M+ + L + + + ESPTGTGKS +++C L W D
Sbjct: 21 FPFETPMVPQDQMMQRIIAALKSKRHALLESPTGTGKSAAMLCASLAWQRD 71
>gi|160333450|ref|NP_001103766.1| BRCA1 interacting protein C-terminal helicase 1 [Danio rerio]
gi|126843119|gb|ABO27623.1| Fanconi anemia J [Danio rerio]
Length = 1217
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 18 LAEVPSEFP-------FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGI 70
+A P E+ FP AY Q M ++ L+N + + ESPTG+GKSL+L+C
Sbjct: 1 MAATPVEYTIGGVKINFPCKAYPSQLAMMNSIIRGLNNGQHCLLESPTGSGKSLALLCSA 60
Query: 71 LKW 73
L W
Sbjct: 61 LAW 63
>gi|440494239|gb|ELQ76638.1| Helicase of the DEAD superfamily [Trachipleistophora hominis]
Length = 773
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 14 EQRPLAEVPSEFPFPFDA-----YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLIC 68
EQR +P P + YD Q +F++ T++N++ IF SPTGTGK+LSL+
Sbjct: 14 EQRGTKSTCYFYPHPMRSLNVTLYDSQKDFIQKAQQTIENNQTAIFSSPTGTGKTLSLLL 73
Query: 69 GILKW 73
++ +
Sbjct: 74 SVVPY 78
>gi|399218456|emb|CCF75343.1| unnamed protein product [Babesia microti strain RI]
Length = 824
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLS 65
F PF Y Q F+KN Y +N + G+FESPTG+GK++
Sbjct: 2 FKLPFAPYPGQLEFIKNAYDVFENCEVGLFESPTGSGKTIC 42
>gi|313233732|emb|CBY09902.1| unnamed protein product [Oikopleura dioica]
Length = 1145
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP++ Y Q ++M L + I ESPTGTGK+L L+ +L +
Sbjct: 13 FPYEPYPAQDSYMSKCIEALKSGCHAILESPTGTGKTLCLLASVLAF 59
>gi|429965105|gb|ELA47102.1| hypothetical protein VCUG_01375 [Vavraia culicis 'floridensis']
Length = 745
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 32 YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIEAKIKD 91
YD Q +F++ T++N++ IF SPTGTGK+LSL+ I+ + H I + + +
Sbjct: 9 YDSQKDFIEKAQRTIENNQVAIFSSPTGTGKTLSLLLSIVPYIEKHVISDFSGVSSANRA 68
Query: 92 L--EISKNET 99
L E++ N+T
Sbjct: 69 LINELNFNDT 78
>gi|308161158|gb|EFO63616.1| TFIIH basal transcription factor complex helicase subunit
[Giardia lamblia P15]
Length = 1060
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
F FPF+ Y Q +M +L L+ + + ESPTGTGK+LSL+
Sbjct: 11 HFRFPFEPYPSQMKYMSSLITALNKKENALLESPTGTGKTLSLL 54
>gi|159118615|ref|XP_001709526.1| TFIIH basal transcription factor complex helicase subunit
[Giardia lamblia ATCC 50803]
gi|157437643|gb|EDO81852.1| TFIIH basal transcription factor complex helicase subunit
[Giardia lamblia ATCC 50803]
Length = 1059
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
F FPF+ Y Q +M +L L+ + + ESPTGTGK+LSL+
Sbjct: 11 HFQFPFEPYPSQIEYMSSLITALNKKENALLESPTGTGKTLSLL 54
>gi|307197478|gb|EFN78712.1| Regulator of telomere elongation helicase 1 [Harpegnathos
saltator]
Length = 963
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y +Q +M+ + L N + G+ ESPTGTGK+
Sbjct: 13 FPFKPYSVQEEYMRKVIECLQNGQHGVLESPTGTGKT 49
>gi|118346503|ref|XP_976906.1| hypothetical protein TTHERM_00030090 [Tetrahymena thermophila]
gi|89288497|gb|EAR86485.1| hypothetical protein TTHERM_00030090 [Tetrahymena thermophila
SB210]
Length = 1236
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH----KIVG 81
FP+D YD Q MK + L N + +F+SPTGTGKSL ++C + H +I+
Sbjct: 8 FPYDNPYDQQIESMKIILDILSNKQNLLFQSPTGTGKSLMVMCAAAAFAEYHSSQFQILF 67
Query: 82 LEKIEAKIKDL--EISKNETVSEDWIEQQSFELKMRNQIDALKDALK 126
L + +I L E++K + +D+I + S L RN + KD +
Sbjct: 68 LTRTNGQINGLVKELNKIRNI-DDFISKYSI-LAGRNNLCIKKDQFR 112
>gi|307176988|gb|EFN66294.1| Regulator of telomere elongation helicase 1 [Camponotus
floridanus]
Length = 978
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y +Q +M+ + L N + G+ ESPTGTGK+
Sbjct: 13 FPFKPYSVQEEYMRKVIECLQNGQHGVLESPTGTGKT 49
>gi|391868700|gb|EIT77910.1| helicase of the DEAD superfamily [Aspergillus oryzae 3.042]
Length = 734
Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLS 65
P AE EF P+ YDIQ FM+ LY ++ K +FESPTG LS
Sbjct: 3 PQAE---EFHHPYSPYDIQLQFMRALYSCIEKGKVAVFESPTGKLAGLS 48
>gi|221482942|gb|EEE21273.1| DNA repair helicase, putative [Toxoplasma gondii GT1]
Length = 1649
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 12 FNEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
F E+R E E FPF Y Q FM+ + + + + ESPTGTGK+L L+C L
Sbjct: 58 FGEKR---EDSVEVDFPFQPYPCQEKFMEKVIDACVHGEHALLESPTGTGKTLCLLCASL 114
Query: 72 KW 73
+
Sbjct: 115 AY 116
>gi|237840857|ref|XP_002369726.1| DNA repair helicase, putative [Toxoplasma gondii ME49]
gi|211967390|gb|EEB02586.1| DNA repair helicase, putative [Toxoplasma gondii ME49]
Length = 1649
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 12 FNEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
F E+R E E FPF Y Q FM+ + + + + ESPTGTGK+L L+C L
Sbjct: 58 FGEKR---EDSVEVDFPFQPYPCQEKFMEKVIDACVHGEHALLESPTGTGKTLCLLCASL 114
Query: 72 KW 73
+
Sbjct: 115 AY 116
>gi|221503270|gb|EEE28968.1| DNA repair helicase, putative [Toxoplasma gondii VEG]
Length = 1649
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 12 FNEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
F E+R E E FPF Y Q FM+ + + + + ESPTGTGK+L L+C L
Sbjct: 58 FGEKR---EDSVEVDFPFQPYPCQEKFMEKVIDACVHGEHALLESPTGTGKTLCLLCASL 114
Query: 72 KW 73
+
Sbjct: 115 AY 116
>gi|428183991|gb|EKX52847.1| hypothetical protein GUITHDRAFT_39398, partial [Guillardia theta
CCMP2712]
Length = 719
Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDN-SKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q ++ L L + + ESPTGTGK+L L+CG+L W
Sbjct: 8 FPFRPYGSQVRLLEALIDALSAPGRHALLESPTGTGKTLCLLCGVLGW 55
>gi|121799524|sp|Q2U587.1|CHL1_ASPOR RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|83773151|dbj|BAE63278.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 721
Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLS 65
P AE EF P+ YDIQ FM+ LY ++ K +FESPTG LS
Sbjct: 3 PQAE---EFHHPYSPYDIQLQFMRALYSCIEKGKVAVFESPTGKLAGLS 48
>gi|345563336|gb|EGX46339.1| hypothetical protein AOL_s00110g163 [Arthrobotrys oligospora ATCC
24927]
Length = 920
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 14/65 (21%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDN----------SKFGIFESPTGTGKSLSLICGILKW 73
+F P+ Y IQ +FM LY L++ S IF S GKSLSLICG L W
Sbjct: 18 DFHHPYTPYPIQLDFMNALYEVLEDGSERYTTPIESLRVIFSS----GKSLSLICGSLTW 73
Query: 74 YYDHK 78
+HK
Sbjct: 74 LREHK 78
>gi|164662899|ref|XP_001732571.1| hypothetical protein MGL_0346 [Malassezia globosa CBS 7966]
gi|159106474|gb|EDP45357.1| hypothetical protein MGL_0346 [Malassezia globosa CBS 7966]
Length = 837
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
++P FP+P Y Q ++M +L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 7 DLPVLFPYP-KIYPEQYSYMVDLKRTLDVKGHGVLEMPSGTGKTVSLLSLIISY 59
>gi|145495232|ref|XP_001433609.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400728|emb|CAK66212.1| unnamed protein product [Paramecium tetraurelia]
Length = 702
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ F Y Q +M+ L TLD GI E PTGTGK++SL+ IL +
Sbjct: 12 FPYKF-LYKEQLEYMQALKQTLDEKGHGILEMPTGTGKTVSLLAFILAY 59
>gi|405960555|gb|EKC26471.1| Fanconi anemia group J protein [Crassostrea gigas]
Length = 1410
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY---YDH 77
E FP Y Q + M+ + ++ + + ESPTG+GKSL+L+C L W Y H
Sbjct: 30 EVVFPCKPYPSQFSMMEKVIKGIERRENCLLESPTGSGKSLALLCSALAWQTAEYSH 86
>gi|403341333|gb|EJY69968.1| Regulator of telomere elongation helicase 1 [Oxytricha trifallax]
Length = 1216
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP++ Y Q N++K+L L + + ESPTGTGK+L L+ G L +
Sbjct: 179 FPYEKPYQCQENYIKSLVKALRKKQNALLESPTGTGKTLCLLSGTLGF 226
>gi|308812532|ref|XP_003083573.1| helicase-related (ISS) [Ostreococcus tauri]
gi|116055454|emb|CAL58122.1| helicase-related (ISS) [Ostreococcus tauri]
Length = 1048
Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIE 86
FP+DAYD Q F++ + + + ESPTGTGK+L L+ L + + G K
Sbjct: 22 FPYDAYDAQIVFIERALEAMCRKQSALLESPTGTGKTLCLLSAALAYARNE---GRAKKR 78
Query: 87 AKIKDLEISKNETVSEDWIEQQ 108
+ S +ETV+E++++ +
Sbjct: 79 RARAREKASTSETVTEEFVDAE 100
>gi|300120242|emb|CBK19796.2| unnamed protein product [Blastocystis hominis]
Length = 759
Score = 44.7 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 23/35 (65%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
M L+ L GI ESPTGTGK+LSL+CG L W
Sbjct: 1 MNTLFDILMKGNIGIIESPTGTGKTLSLLCGSLTW 35
>gi|350414537|ref|XP_003490348.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Bombus impatiens]
Length = 980
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y IQ +M + L N K G+ ESPTGTGK+
Sbjct: 13 FPFKPYSIQEEYMVKVIECLQNGKNGVLESPTGTGKT 49
>gi|340715420|ref|XP_003396211.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 homolog [Bombus terrestris]
Length = 996
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y IQ +M + L N K G+ ESPTGTGK+
Sbjct: 13 FPFKPYSIQEEYMVKVIECLQNGKNGVLESPTGTGKT 49
>gi|357631598|gb|EHJ79067.1| FancJ-like protein [Danaus plexippus]
Length = 830
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E P + Y Q M + ++ + + ESPTGTGK+L+L+C L W
Sbjct: 18 EVVLPIEPYRCQMVVMSKVIKAINEGQNCLLESPTGTGKTLALLCSSLAW 67
>gi|343425212|emb|CBQ68748.1| probable RAD3-DNA helicase/ATPase [Sporisorium reilianum SRZ2]
Length = 847
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
E+P FP+P Y Q +M +L TLD + + E P+GTGK++SL+ I+ + H
Sbjct: 7 ELPVLFPYP-KIYPEQYAYMTDLKRTLDANGHCVLEMPSGTGKTVSLLSLIVSYQLFH 63
>gi|383862044|ref|XP_003706494.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Megachile rotundata]
Length = 974
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y +Q +M + L N+K G+ ESPTGTGK+
Sbjct: 13 FPFKPYSVQEEYMTKVIECLQNNKNGVLESPTGTGKT 49
>gi|401396986|ref|XP_003879954.1| hypothetical protein NCLIV_004030 [Neospora caninum Liverpool]
gi|325114362|emb|CBZ49919.1| hypothetical protein NCLIV_004030 [Neospora caninum Liverpool]
Length = 1669
Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FPF+ Y Q FM+ + + + ESPTGTGK+L L+C L +
Sbjct: 65 EIDFPFEPYPCQEKFMEKVVEACVREEHALLESPTGTGKTLCLLCASLAY 114
>gi|313224365|emb|CBY20154.1| unnamed protein product [Oikopleura dioica]
Length = 976
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++K L + ESPTGTGK+L L+ ++ +
Sbjct: 16 FPYDPYPAQEEYIKKCVEALVKRNHAVLESPTGTGKTLCLLASVIAY 62
>gi|341901524|gb|EGT57459.1| CBN-DOG-1 protein [Caenorhabditis brenneri]
Length = 987
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 14 EQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI---CGI 70
EQ + VP FP Y Q + + L NS+ + ESPTG+GK+++L+ C
Sbjct: 76 EQLMMLSVPVRFPQGMSLYPTQKLMIVRILAALKNSQNVLGESPTGSGKTMALLSSTCAW 135
Query: 71 LKWYYDHK 78
LK Y D K
Sbjct: 136 LKQYIDEK 143
>gi|42601324|gb|AAS21351.1| helicase-like protein NHL-like protein [Oikopleura dioica]
Length = 1016
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++K L + ESPTGTGK+L L+ ++ +
Sbjct: 16 FPYDPYPAQEEYIKKCVEALVKRNHAVLESPTGTGKTLCLLASVIAY 62
>gi|412985226|emb|CCO20251.1| regulator of telomere elongation helicase 1 [Bathycoccus
prasinos]
Length = 1313
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+FPFP + Y Q M+ + + L + ESPTGTGK++ L+C L +
Sbjct: 27 KFPFP-EPYPSQIVMMEKILFALREGTNALLESPTGTGKTVCLLCATLAF 75
>gi|226289058|gb|EEH44570.1| DNA repair helicase RAD3 [Paracoccidioides brasiliensis Pb18]
Length = 791
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
P ++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ Y
Sbjct: 52 PNLDLPVLFPYP-RIYPEQYAYMCDLKKTLDTGGHCVLEMPSGTGKTVSLLSLIIA-YQQ 109
Query: 77 HK 78
HK
Sbjct: 110 HK 111
>gi|209736390|gb|ACI69064.1| TFIIH basal transcription factor complex helicase subunit [Salmo
salar]
Length = 319
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 14/138 (10%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKI 85
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ + ++ + + I
Sbjct: 12 FPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQREYPLEVTKLI 71
Query: 86 EAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNEKR 145
EI K +E S E +N I AL AL S+K N+ E
Sbjct: 72 YCSRTVPEIEKVVEELRKLVEFYSKETGEKNNILAL--ALSSRK-------NLCVHPE-- 120
Query: 146 KKSLRNDQEV--KVHALT 161
SLR +EV K H+LT
Sbjct: 121 VSSLRFGKEVDGKCHSLT 138
>gi|119577746|gb|EAW57342.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 (xeroderma pigmentosum D),
isoform CRA_b [Homo sapiens]
Length = 429
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|350631746|gb|EHA20117.1| ATP-dependent DNA helicase-like protein [Aspergillus niger ATCC
1015]
Length = 987
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSL 66
+F P+ YDIQ M+ LY L+ K +FESPTG S L
Sbjct: 7 DFHHPYSPYDIQLQLMRALYSCLEQGKVAVFESPTGKRISFVL 49
>gi|145498283|ref|XP_001435129.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402259|emb|CAK67732.1| unnamed protein product [Paramecium tetraurelia]
Length = 722
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ F Y Q +M+ L TLD GI E PTGTGK++SL+ I+ +
Sbjct: 12 FPYKF-LYKEQLEYMQALKQTLDEKGHGILEMPTGTGKTVSLLALIIAY 59
>gi|71020135|ref|XP_760298.1| hypothetical protein UM04151.1 [Ustilago maydis 521]
gi|46100007|gb|EAK85240.1| hypothetical protein UM04151.1 [Ustilago maydis 521]
Length = 850
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
E+P FP+P Y Q +M +L TLD + + E P+GTGK++SL+ I+ + H
Sbjct: 7 ELPVLFPYP-KIYPEQYAYMTDLKRTLDANGHCVLEMPSGTGKTVSLLSLIVSYQQFH 63
>gi|326433574|gb|EGD79144.1| hypothetical protein PTSG_09876 [Salpingoeca sp. ATCC 50818]
Length = 879
Score = 43.9 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q + + LD + ESPTG+GKSL+L+C L W
Sbjct: 13 FPFKPYPSQFLLISAILKALDKGDNALLESPTGSGKSLALLCASLAW 59
>gi|320169108|gb|EFW46007.1| hypothetical protein CAOG_03975 [Capsaspora owczarzaki ATCC
30864]
Length = 1452
Score = 43.9 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
FPF Y Q M ++ ++ + + ES TGTGKSL+++C L W ++
Sbjct: 18 FPFQPYPAQIAMMSSVIRAVEKRQNALIESATGTGKSLAMLCASLSWQAEY 68
>gi|313247490|emb|CBY15705.1| unnamed protein product [Oikopleura dioica]
Length = 760
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIV 80
+P FPF + Y Q +M+ L Y+++N + E P GTGK+++++ +L + H
Sbjct: 8 IPVLFPFDY-VYPEQLAYMRELKYSIENRGHALIEMPCGTGKTVTILSFLLAYKKAHP-A 65
Query: 81 GLEKI 85
LEKI
Sbjct: 66 SLEKI 70
>gi|145354926|ref|XP_001421725.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581963|gb|ABP00019.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 749
Score = 43.5 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIE 86
FPF+AYD Q FM+ + + + ESPTGTGK+L L+ L + K
Sbjct: 25 FPFEAYDNQLVFMEKALLAMCRGEHALLESPTGTGKTLCLLASALAFVRSEGRARKRKFR 84
Query: 87 AKIKD 91
+++D
Sbjct: 85 EEVRD 89
>gi|348532245|ref|XP_003453617.1| PREDICTED: Fanconi anemia group J protein [Oreochromis niloticus]
Length = 1236
Score = 43.1 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYY 75
FP AY Q M + L+ ++ + ESPTG+GKSL+L+C L W +
Sbjct: 17 FPCKAYPSQLAMMNLIVRGLNTGQYCLLESPTGSGKSLALLCSALGWQH 65
>gi|154281191|ref|XP_001541408.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411587|gb|EDN06975.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 501
Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPT 58
F PF YDIQ FM+ L+ ++ K GIFESPT
Sbjct: 8 FHHPFIPYDIQRQFMQALFDCIEGGKVGIFESPT 41
>gi|213511929|ref|NP_001133411.1| TFIIH basal transcription factor complex helicase subunit [Salmo
salar]
gi|209153902|gb|ACI33183.1| TFIIH basal transcription factor complex helicase subunit [Salmo
salar]
Length = 760
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 14/138 (10%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKI 85
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ + ++ + + I
Sbjct: 12 FPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQREYPLEVTKLI 71
Query: 86 EAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNEKR 145
EI K +E S E +N I AL AL S+K N+ E
Sbjct: 72 YCSRTVPEIEKVVEELRKLMEFYSKETGEKNNILAL--ALSSRK-------NLCVHPE-- 120
Query: 146 KKSLRNDQEV--KVHALT 161
SLR +EV K H+LT
Sbjct: 121 VSSLRFGKEVDGKCHSLT 138
>gi|449015796|dbj|BAM79198.1| similar to BRCA1-binding helicase-like protein BACH1
[Cyanidioschyzon merolae strain 10D]
Length = 1103
Score = 43.1 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 6 PNEDKEFNEQRPL--AEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
PN + R L A + +FP + + Q M + L ++ ESPTGTGKS
Sbjct: 10 PNGAQTLKTWRTLEIAGLEVKFPTELEPHKPQLIIMNQVIRCLQRAQNACIESPTGTGKS 69
Query: 64 LSLICGILKWYYDHK 78
L+L+C L W K
Sbjct: 70 LALLCSALAWLEKEK 84
>gi|403375820|gb|EJY87881.1| hypothetical protein OXYTRI_22467 [Oxytricha trifallax]
Length = 645
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP Y++Q ++M + N+KF + PTGTGK+LSL+ L +
Sbjct: 67 FPNVPYNVQVDYMTQAVKAIKNNKFAALDMPTGTGKTLSLLSSTLAF 113
>gi|194382496|dbj|BAG64418.1| unnamed protein product [Homo sapiens]
Length = 127
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|310798566|gb|EFQ33459.1| DNA repair helicase [Glomerella graminicola M1.001]
Length = 791
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E+P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 7 ELPVIFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAY 59
>gi|429962084|gb|ELA41628.1| hypothetical protein VICG_01376 [Vittaforma corneae ATCC 50505]
Length = 657
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY 74
+P E P+ + Y Q + L + + ESPTGTGKSLS++C +L +Y
Sbjct: 9 IPVEIPY--EPYPPQLVTISKLIECFQTNTNALIESPTGTGKSLSILCSVLAFY 60
>gi|224002519|ref|XP_002290931.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972707|gb|EED91038.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1848
Score = 42.7 bits (99), Expect = 0.068, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
+PFP Q +L L NSK + ESPTGTGKS +++C +L W H
Sbjct: 490 WPFP-QVMKPQRQMAIHLIKALKNSKHVVLESPTGTGKSAAILCSVLAWQRFH 541
>gi|378756742|gb|EHY66766.1| hypothetical protein NERG_00406 [Nematocida sp. 1 ERTm2]
Length = 690
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
++ Y+ Q ++ + LDN + G+ ESPTGTGK+LS++ ++ W
Sbjct: 15 YELYEPQRKSIETILTCLDNGESGMIESPTGTGKTLSILEAVVAW 59
>gi|326932020|ref|XP_003212120.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Meleagris gallopavo]
Length = 1136
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 52 GIFESPTGTGKSLSLICGILKWYYDHK-IVGLEKIEAKIKDLEISKNETVS 101
GI ESPTGTGK+L L+C L W K + KI ++ +E+ + +S
Sbjct: 19 GILESPTGTGKTLCLLCSTLAWREHFKDTISARKIAQRMNGVELFPDRPMS 69
>gi|261332362|emb|CBH15357.1| DNA repair helicase, putative [Trypanosoma brucei gambiense
DAL972]
Length = 1056
Score = 42.7 bits (99), Expect = 0.079, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 26 PFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
PFPF+ Y +Q + M+ + L + ESPTGTGK+ L+ G+L ++ + +E
Sbjct: 10 PFPFEPYPLQLHAMEAIREGLSAGDVVVLESPTGTGKTQILLNGVLSHMFEPVVTSVE 67
>gi|47224934|emb|CAG06504.1| unnamed protein product [Tetraodon nigroviridis]
Length = 862
Score = 42.4 bits (98), Expect = 0.091, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNSIIRGLNAGNHCLLESPTGSGKSLALLCSALGW 63
>gi|71747098|ref|XP_822604.1| DNA repair helicase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832272|gb|EAN77776.1| DNA repair helicase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1056
Score = 42.4 bits (98), Expect = 0.092, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 26 PFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
PFPF+ Y +Q + M+ + L + ESPTGTGK+ L+ G+L ++ + +E
Sbjct: 10 PFPFEPYPLQLHAMEAIREGLSAGDVVVLESPTGTGKTQILLNGVLSHMFEPVVTSVE 67
>gi|402224656|gb|EJU04718.1| DNA repair helicase [Dacryopinax sp. DJM-731 SS1]
Length = 798
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M +L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDRIYPEQYSYMCDLKKTLDAQGHGVLEMPSGTGKTVSLLSLIVSY 59
>gi|334328785|ref|XP_003341121.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Monodelphis
domestica]
Length = 807
Score = 42.4 bits (98), Expect = 0.096, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKI 85
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ + H + + I
Sbjct: 59 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTISLLALIVAYQRVHPLEVTKLI 118
Query: 86 EAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNEKR 145
EI K + E SFE + ++ L AL S+K N+ E
Sbjct: 119 YCSRTVPEIEK--VIEELRKLMNSFEKQEGEKVPFLGLALSSRK-------NLCIHPEVT 169
Query: 146 KKSLRNDQEVKVHALT 161
D + K H+LT
Sbjct: 170 PLRFGKDVDGKCHSLT 185
>gi|255078886|ref|XP_002503023.1| predicted protein [Micromonas sp. RCC299]
gi|226518289|gb|ACO64281.1| predicted protein [Micromonas sp. RCC299]
Length = 1566
Score = 42.4 bits (98), Expect = 0.099, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 16 RPLAEVPSEFPFPFDAYDI----QSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
RP PS PFP + +I M + D + + ESPTG+GKSL+L+C L
Sbjct: 9 RPHCWHPSRLPFP-EPLNIVPHSHQGVMGKVLKAADAGENALLESPTGSGKSLALLCSAL 67
Query: 72 KW 73
W
Sbjct: 68 AW 69
>gi|430813060|emb|CCJ29560.1| unnamed protein product [Pneumocystis jirovecii]
Length = 774
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 14/121 (11%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCHLKKTLDAGGHCVLEMPSGTGKTVSLLSLIISYQKVFEQ 65
Query: 74 -----YYDHKIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQ 128
Y + +EKI ++K+L I + +SE+ + ++ L R + L ++K +
Sbjct: 66 HRKLVYCSRTMSEIEKILVELKNL-IEFRKKISEENSKFRALGLTSRKNL-CLHPSIKHE 123
Query: 129 K 129
K
Sbjct: 124 K 124
>gi|145355132|ref|XP_001421822.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582061|gb|ABP00116.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 849
Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 39 MKNLYYTLDN-SKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIEAKIKDL----- 92
M+++Y + + FG FESPTGTGK+LS++ + W D + L + +D
Sbjct: 1 MRHIYDACERRATFGAFESPTGTGKTLSVLIAAMSWIDDRRRARLAGTKLDDEDDGRDGA 60
Query: 93 -EISKNETVSE-DWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNEKRKKSLR 150
E +K+ E DW+ + DA + + DE +R+ E R +
Sbjct: 61 GETTKSAEDDEPDWLREY--------------DAKRRKTDADETRARLRRDAETRLREKI 106
Query: 151 NDQEVKVHALTYRNRMDEKNSKEKRK---EEERDGLENETQEL 190
+ + A+ +N +K++ E+R+ +E G EN ++L
Sbjct: 107 RGGDARDSAV--KNDEIDKHTAEEREFLADEYDSGAENAKEDL 147
>gi|66362610|ref|XP_628271.1| RAD3'DEXDc+HELICc protein' [Cryptosporidium parvum Iowa II]
gi|46229591|gb|EAK90409.1| RAD3'DEXDc+HELICc protein' [Cryptosporidium parvum Iowa II]
Length = 841
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVG 81
E FP+D Y Q +MK L LD G+ E PTGTGK+++L+ I + H +G
Sbjct: 10 EVFFPYDNVYPEQLEYMKYLKQILDAHSHGVLEMPTGTGKTVTLLSFITSYQLVHPNMG 68
>gi|67601888|ref|XP_666434.1| DNA repair protein-related [Cryptosporidium hominis TU502]
gi|54657424|gb|EAL36199.1| DNA repair protein-related [Cryptosporidium hominis]
Length = 841
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVG 81
E FP+D Y Q +MK L LD G+ E PTGTGK+++L+ I + H +G
Sbjct: 10 EVFFPYDNVYPEQLEYMKYLKQILDAHSHGVLEMPTGTGKTVTLLSFITSYQLVHPNMG 68
>gi|449328753|gb|AGE95029.1| ATP dependent DNA binding helicase [Encephalitozoon cuniculi]
Length = 619
Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 30 DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+ YD+Q +++ +D GIF SPTGTGK++SL+ ++ +
Sbjct: 5 ELYDVQKLLIRDARRVIDEGTAGIFSSPTGTGKTMSLLSAVIDY 48
>gi|300176870|emb|CBK25439.2| unnamed protein product [Blastocystis hominis]
Length = 1177
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 24 EFP---FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
EFP PF + Q + M + +L ++ I ESPTGTGK+L+++C L W
Sbjct: 54 EFPQDRIPFSS---QKSTMTAIVKSLSRNENAIVESPTGTGKTLAILCSSLSW 103
>gi|19173439|ref|NP_597242.1| ATP DEPENDENT DNA BINDING HELICASE (RAD3/XPD SUBFAMILY OF
HELICASES) [Encephalitozoon cuniculi GB-M1]
gi|19171028|emb|CAD26418.1| ATP DEPENDENT DNA BINDING HELICASE (RAD3/XPD SUBFAMILY OF
HELICASES) [Encephalitozoon cuniculi GB-M1]
Length = 619
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 30 DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+ YD+Q +++ +D GIF SPTGTGK++SL+ ++ +
Sbjct: 5 ELYDVQKLLIRDARRVIDEGTAGIFSSPTGTGKTMSLLSAVIDY 48
>gi|17507137|ref|NP_493618.1| Protein DOG-1 [Caenorhabditis elegans]
gi|3876642|emb|CAB04262.1| Protein DOG-1 [Caenorhabditis elegans]
Length = 983
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 14 EQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI---CGI 70
EQ + VP P Y Q + + L NS+ + ESPTG+GK+++L+ C
Sbjct: 73 EQLMMLGVPVRVPRGLSLYSTQKLMIVRILTALKNSQNVLGESPTGSGKTMALLASTCAW 132
Query: 71 LKWYYDHKIVGLEKIE 86
LK Y D K EK E
Sbjct: 133 LKQYIDEKRESKEKCE 148
>gi|209879600|ref|XP_002141240.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
gi|209556846|gb|EEA06891.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
Length = 835
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVG 81
E FP+D Y Q +MK L LD G+ E PTGTGK+++L I + H +G
Sbjct: 10 EVFFPYDYVYPEQLEYMKYLKQILDAHSHGVLEMPTGTGKTVTLFSFITSYQLAHPNLG 68
>gi|351706985|gb|EHB09904.1| TFIIH basal transcription factor complex helicase subunit,
partial [Heterocephalus glaber]
Length = 759
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL--KWYYDHKIVGLE 83
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +W Y ++ L
Sbjct: 11 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQWAYPLEVTKLI 70
Query: 84 KIEAKIKDLE 93
+ ++E
Sbjct: 71 YCSRTVPEIE 80
>gi|403299021|ref|XP_003940291.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Saimiri boliviensis boliviensis]
Length = 782
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 34 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 81
>gi|296645|emb|CAA36463.1| ercc2 gene product [Homo sapiens]
Length = 730
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|401625969|gb|EJS43941.1| rad3p [Saccharomyces arboricola H-6]
Length = 777
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YYD 76
++P FP+P Y Q N+M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYNYMCDIKRTLDVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|254578942|ref|XP_002495457.1| ZYRO0B11836p [Zygosaccharomyces rouxii]
gi|238938347|emb|CAR26524.1| ZYRO0B11836p [Zygosaccharomyces rouxii]
Length = 770
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
++P FP+P Y Q ++M +L TLD+ I E P+GTGK++SL+
Sbjct: 7 DLPVLFPYP-KIYPEQYHYMCDLKRTLDSGGNSILEMPSGTGKTVSLL 53
>gi|380799421|gb|AFE71586.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1, partial [Macaca mulatta]
Length = 771
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 23 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 70
>gi|402905923|ref|XP_003915757.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Papio anubis]
Length = 760
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|296234099|ref|XP_002762284.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Callithrix jacchus]
Length = 760
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|384253341|gb|EIE26816.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 771
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVG---- 81
FP+D Y Q +M L + LD + E PTGTGK+++L+ I + H VG
Sbjct: 12 FPYDYIYPEQFQYMLELKHALDAKGHCLLEMPTGTGKTITLLSLITSYQLAHPEVGKLIY 71
Query: 82 -------LEKIEAKIKDL 92
+EK+ A++K+L
Sbjct: 72 CTRTVPEMEKVLAELKEL 89
>gi|426389184|ref|XP_004061004.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Gorilla gorilla gorilla]
gi|83405523|gb|AAI10524.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Homo sapiens]
gi|119577745|gb|EAW57341.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 (xeroderma pigmentosum D),
isoform CRA_a [Homo sapiens]
gi|383416479|gb|AFH31453.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1 [Macaca mulatta]
Length = 760
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|307686333|dbj|BAJ21097.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [synthetic construct]
Length = 760
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|123493892|ref|XP_001326390.1| helicase [Trichomonas vaginalis G3]
gi|121909304|gb|EAY14167.1| helicase, putative [Trichomonas vaginalis G3]
Length = 717
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 32 YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
Y IQ+ F ++ +K G FESPTGTGKS+S++ L +
Sbjct: 20 YSIQTEFATDMIKAFQENKIGFFESPTGTGKSMSVLTSSLAF 61
>gi|41055526|ref|NP_957220.1| TFIIH basal transcription factor complex helicase subunit [Danio
rerio]
gi|29437217|gb|AAH49410.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Danio rerio]
Length = 643
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 20/141 (14%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKI 85
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ + K LE
Sbjct: 12 FPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAY---QKTYPLEVT 68
Query: 86 EAKIKDLEISKNETVSED---WIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQN 142
+ + + E V E+ ++ S + ++N D L AL S+K N+
Sbjct: 69 KLVYCSRTVPEIEKVVEELRKLMDYYSKQTGVKN--DFLALALSSRK-------NLCIHP 119
Query: 143 EKRKKSLRNDQEV--KVHALT 161
E SLR +EV K H+LT
Sbjct: 120 E--VSSLRFGKEVDGKCHSLT 138
>gi|350538411|ref|NP_001233519.1| TFIIH basal transcription factor complex helicase subunit [Pan
troglodytes]
gi|397493359|ref|XP_003817575.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Pan paniscus]
gi|343958692|dbj|BAK63201.1| TFIIH basal transcription factor complex helicase subunit [Pan
troglodytes]
Length = 760
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|15834617|ref|NP_000391.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1 [Homo sapiens]
gi|119540|sp|P18074.1|ERCC2_HUMAN RecName: Full=TFIIH basal transcription factor complex helicase
XPD subunit; AltName: Full=Basic transcription factor 2
80 kDa subunit; Short=BTF2 p80; AltName: Full=CXPD;
AltName: Full=DNA excision repair protein ERCC-2;
AltName: Full=DNA repair protein complementing XP-D
cells; AltName: Full=TFIIH basal transcription factor
complex 80 kDa subunit; Short=TFIIH 80 kDa subunit;
Short=TFIIH p80; AltName: Full=Xeroderma pigmentosum
group D-complementing protein
gi|17939382|gb|AAL48323.1| ERCC2 [Homo sapiens]
gi|82568960|gb|AAI08256.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Homo sapiens]
Length = 760
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|355703655|gb|EHH30146.1| hypothetical protein EGK_10751 [Macaca mulatta]
Length = 760
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|403358712|gb|EJY79009.1| Fanconi anemia group J protein [Oxytricha trifallax]
Length = 965
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FP Y +Q +M + N+K+ E PTGTGK+LSL+ L +
Sbjct: 104 EIKFPKIPYKVQEEYMTLAVKAIKNNKYAALEMPTGTGKTLSLLSSTLAF 153
>gi|403299023|ref|XP_003940292.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Saimiri boliviensis boliviensis]
Length = 704
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 34 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 81
>gi|394994903|gb|AFN42926.1| XPD2 protein, partial [Plasmodium falciparum]
Length = 526
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYY----DHK 78
E FP+D Y Q +MK L TLD+ + E PTGTGK++++ I + Y + K
Sbjct: 10 EIFFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQYHKKDEGK 69
Query: 79 IVGLEKIEAKIKD--LEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDEL 134
+ + A+++ LE+ K + ++Q+ E K++N+ D + D +K+ D +
Sbjct: 70 FIFCTRTVAEMEKSLLELKKVIQYRINVMKQRKVE-KLKNEKDDVNDVIKNDDVNDVI 126
>gi|83405926|gb|AAI10523.1| ERCC2 protein [Homo sapiens]
Length = 682
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|296234101|ref|XP_002762285.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Callithrix jacchus]
Length = 682
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|397493361|ref|XP_003817576.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Pan paniscus]
Length = 682
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|395854140|ref|XP_003799556.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Otolemur garnettii]
Length = 760
Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIIAY 59
>gi|190405726|gb|EDV08993.1| DNA repair helicase RAD3 [Saccharomyces cerevisiae RM11-1a]
gi|207345787|gb|EDZ72494.1| YER171Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 780
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YYD 76
++P FP+P Y Q N+M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|398365073|ref|NP_011098.3| Rad3p [Saccharomyces cerevisiae S288c]
gi|131812|sp|P06839.1|RAD3_YEAST RecName: Full=DNA repair helicase RAD3; AltName: Full=General
transcription and DNA repair factor IIH subunit RAD3;
Short=TFIIH subunit RAD3
gi|4269|emb|CAA26215.1| unnamed protein product [Saccharomyces cerevisiae]
gi|172331|gb|AAA34943.1| RAD3 protein [Saccharomyces cerevisiae]
gi|603412|gb|AAB64698.1| Rad3p: DNA repair helicase component of transcription factor b
[Saccharomyces cerevisiae]
gi|151944888|gb|EDN63147.1| transcription initiation factor TFIIH subunit [Saccharomyces
cerevisiae YJM789]
gi|256271309|gb|EEU06379.1| Rad3p [Saccharomyces cerevisiae JAY291]
gi|259146100|emb|CAY79360.1| Rad3p [Saccharomyces cerevisiae EC1118]
gi|285811805|tpg|DAA07833.1| TPA: Rad3p [Saccharomyces cerevisiae S288c]
gi|323305313|gb|EGA59060.1| Rad3p [Saccharomyces cerevisiae FostersB]
gi|323355348|gb|EGA87173.1| Rad3p [Saccharomyces cerevisiae VL3]
gi|349577832|dbj|GAA23000.1| K7_Rad3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299876|gb|EIW10968.1| Rad3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 778
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YYD 76
++P FP+P Y Q N+M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|347365666|gb|AEO89688.1| ercc2 [Danio rerio]
Length = 760
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAY 59
>gi|198412602|ref|XP_002126055.1| PREDICTED: similar to ERCC2/XPD gene product [Ciona intestinalis]
Length = 760
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
FP+ F Y Q ++M L TLD G+ E P+GTGK+ +L+ I+ + Y++
Sbjct: 12 FPYEF-IYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTATLLSLIVAYQYEY 63
>gi|395854142|ref|XP_003799557.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Otolemur garnettii]
Length = 682
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIIAY 59
>gi|340506361|gb|EGR32513.1| tfiih basal transcription factor complex helicase subunit,
putative [Ichthyophthirius multifiliis]
Length = 809
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLS 65
++P FP+ Y Q +MK+L LDN GI E PTGTGK++
Sbjct: 7 DLPVYFPYQ-SLYKEQLEYMKDLKLILDNQGHGIIEMPTGTGKTVC 51
>gi|432891078|ref|XP_004075537.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Oryzias latipes]
Length = 665
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAY 59
>gi|50293749|ref|XP_449286.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528599|emb|CAG62260.1| unnamed protein product [Candida glabrata]
Length = 775
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YYD 76
++P FP+P Y Q +M+++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYQYMRDIKRTLDAGGNSILEMPSGTGKTVSLLSLTIAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|422296028|gb|EKU23327.1| DNA excision repair protein ERCC-2, partial [Nannochloropsis
gaditana CCMP526]
Length = 937
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 27 FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVG 81
FP+D Y+ Q N+M L LD + E PTGTGK++ LI I + + H VG
Sbjct: 13 FPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVG 68
>gi|429962537|gb|ELA42081.1| hypothetical protein VICG_00930 [Vittaforma corneae ATCC 50505]
Length = 599
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E+ F Y Q ++++ T++ K I SPTGTGK+LSL+C + +
Sbjct: 2 EYGFSRKLYPSQIKLIQDVINTINQKKMAIVSSPTGTGKTLSLLCALTNF 51
>gi|380087536|emb|CCC05322.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 989
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 22/34 (64%)
Query: 57 PTGTGKSLSLICGILKWYYDHKIVGLEKIEAKIK 90
PTGTGKSLSLIC L W +HK + E KIK
Sbjct: 134 PTGTGKSLSLICASLTWLRNHKRLQFETEIDKIK 167
>gi|394994901|gb|AFN42925.1| XPD1 protein, partial [Plasmodium falciparum]
Length = 437
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
E FP+D Y Q +MK L TLD+ + E PTGTGK++++ I + Y K
Sbjct: 10 EIFFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQYHKK 65
>gi|340056962|emb|CCC51301.1| putative DNA repair helicase, fragment [Trypanosoma vivax Y486]
Length = 1251
Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 26 PFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
PFPF+ Y +Q + M+++ L + ESPTGTGK+ L+ G+L ++
Sbjct: 29 PFPFEPYPLQLHAMESIRSGLAAGDVVVLESPTGTGKTQVLLNGVLSHVFE 79
>gi|428782683|ref|YP_007112436.1| central tail fiber [Enterobacterial phage mEp390]
gi|392505819|gb|AFM76115.1| central tail fiber [Enterobacterial phage mEp390]
Length = 1149
Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Query: 45 TLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIEA---KIKDLEISKNETVS 101
T D K I S TGTG L+ + ++ +GL+ + + + ++ + NE+
Sbjct: 746 TDDTLKTEIQYSLTGTGDDAMLLADVPYPQRKYQQMGLKAGQIFWYRAQLVDRTGNESGY 805
Query: 102 EDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNEKRKKSLRNDQEVKVHALT 161
DW+ Q+ + + + D + + +K T+ +LIEN NEK + A
Sbjct: 806 TDWVRGQA-SIDVSDITDVILEEIKDSDTFKDLIENAVDSNEK----------IAGMADE 854
Query: 162 YRNRMDEKNSKEKRKEEERDGLENETQELDE 192
+N DE + K +E DGL ++DE
Sbjct: 855 IKNHADELEQQAKDIQENADGLAQAEVKIDE 885
>gi|396081915|gb|AFN83529.1| Rad3-like ATP dependent DNA binding helicase [Encephalitozoon
romaleae SJ-2008]
Length = 617
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 32 YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
Y+ Q F+K+ +D GIF SPTGTGK++SL+ ++ +
Sbjct: 7 YEGQKQFIKDAKKIVDGEAVGIFSSPTGTGKTMSLLSAVVDY 48
>gi|308806570|ref|XP_003080596.1| putative BRCA1 interacting protein C-terminal helicase 1 (ISS)
[Ostreococcus tauri]
gi|116059057|emb|CAL54764.1| putative BRCA1 interacting protein C-terminal helicase 1 (ISS)
[Ostreococcus tauri]
Length = 1045
Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FP Y Q M + + + + + ESPTG+GKSL+L+C L W
Sbjct: 45 EIRFPLVPYASQIAVMSQVIRAVTSKQCALVESPTGSGKSLALLCSALAW 94
>gi|432108806|gb|ELK33414.1| TFIIH basal transcription factor complex helicase XPD subunit,
partial [Myotis davidii]
Length = 600
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|167524360|ref|XP_001746516.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775278|gb|EDQ88903.1| predicted protein [Monosiga brevicollis MX1]
Length = 1041
Score = 40.4 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 46 LDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIEAKIKDLE 93
L+ + ESPTGTGK+L+L+C +L W K+ +I A DLE
Sbjct: 73 LEQKDNALLESPTGTGKTLALLCSVLAWQKSEKM----RIAAMRADLE 116
>gi|336259278|ref|XP_003344441.1| hypothetical protein SMAC_08637 [Sordaria macrospora k-hell]
Length = 722
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 22/34 (64%)
Query: 57 PTGTGKSLSLICGILKWYYDHKIVGLEKIEAKIK 90
PTGTGKSLSLIC L W +HK + E KIK
Sbjct: 134 PTGTGKSLSLICASLTWLRNHKRLQFETEIDKIK 167
>gi|303289154|ref|XP_003063865.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454933|gb|EEH52238.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 668
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 28/57 (49%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
P+ V FP + Q M + L + + ESPTGTGKSLSL+C L W
Sbjct: 249 PMGGVVVHFPAGLTPHVPQKITMSKVIAALQKRQNALVESPTGTGKSLSLLCSALAW 305
>gi|118373403|ref|XP_001019895.1| hypothetical protein TTHERM_00588880 [Tetrahymena thermophila]
gi|89301662|gb|EAR99650.1| hypothetical protein TTHERM_00588880 [Tetrahymena thermophila
SB210]
Length = 1492
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
P E P+P Q + M+ + TL N K +F+SPTGTGK+L I L +
Sbjct: 529 PHENPYPN-----QLDSMQEIIKTLKNKKNLLFQSPTGTGKTLMTISSALAY 575
>gi|338710190|ref|XP_001500524.3| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Equus caballus]
Length = 785
Score = 40.0 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 40 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 87
>gi|406702333|gb|EKD05364.1| hypothetical protein A1Q2_00323 [Trichosporon asahii var. asahii
CBS 8904]
Length = 668
Score = 40.0 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 12/58 (20%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGI------------FESPTGTGK 62
P + P+ FPFP+ Y IQ + MK ++ +++ K I SPTGTGK
Sbjct: 28 PHLDTPTSFPFPYTPYQIQLDLMKTVFGAIEDGKIAIVGLHRSDSTDVQVSSPTGTGK 85
>gi|156846864|ref|XP_001646318.1| hypothetical protein Kpol_1032p54 [Vanderwaltozyma polyspora DSM
70294]
gi|156116993|gb|EDO18460.1| hypothetical protein Kpol_1032p54 [Vanderwaltozyma polyspora DSM
70294]
Length = 776
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
++P FP+P Y Q ++M ++ TLD I E P+GTGK++SL+
Sbjct: 7 DLPVLFPYP-KIYPEQYHYMCDMKKTLDAGGNSILEMPSGTGKTVSLL 53
>gi|348687642|gb|EGZ27456.1| hypothetical protein PHYSODRAFT_554000 [Phytophthora sojae]
Length = 1025
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL---KWYYDHKIV 80
EFP + Q M + L + + ESPTG+GK+L+L+C L K + K+
Sbjct: 30 EFPRGKRPFPAQFAVMNKVLTALKTEQHALLESPTGSGKTLALLCSSLTFQKQFVRDKVA 89
Query: 81 GLEK 84
L+K
Sbjct: 90 ALKK 93
>gi|401887275|gb|EJT51272.1| hypothetical protein A1Q1_07550 [Trichosporon asahii var. asahii
CBS 2479]
Length = 668
Score = 40.0 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 12/58 (20%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGI------------FESPTGTGK 62
P + P+ FPFP+ Y IQ + MK ++ +++ K I SPTGTGK
Sbjct: 28 PHLDTPTSFPFPYTPYQIQLDLMKTVFGAIEDGKIAIVGLHRSDSTDVQVSSPTGTGK 85
>gi|308485824|ref|XP_003105110.1| CRE-DOG-1 protein [Caenorhabditis remanei]
gi|308257055|gb|EFP01008.1| CRE-DOG-1 protein [Caenorhabditis remanei]
Length = 1008
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 11 EFNEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI--- 67
+FN Q + VP +P Y Q + + + NS+ + ESPTG+GK+++L+
Sbjct: 69 DFN-QLMMQSVPVRYPKGLTLYPTQKLMIVRIIKAIQNSENVLGESPTGSGKTMALLSST 127
Query: 68 CGILKWYYDHK 78
C LK Y D K
Sbjct: 128 CAWLKQYMDQK 138
>gi|255550000|ref|XP_002516051.1| conserved hypothetical protein [Ricinus communis]
gi|223544956|gb|EEF46471.1| conserved hypothetical protein [Ricinus communis]
Length = 270
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTG 59
FP+ Y I+ FMK LY +LD + ESPTG
Sbjct: 19 FPYKPYSIEVEFMKALYGSLDKGGISMLESPTG 51
>gi|268569974|ref|XP_002640663.1| C. briggsae CBR-DOG-1 protein [Caenorhabditis briggsae]
Length = 869
Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 14 EQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
EQ + VP FP Y Q + + L +S+ + ESPTG+GK+++L+ W
Sbjct: 64 EQLMMLSVPVRFPKGMSLYPTQKLMIVRILAALKSSQNVLGESPTGSGKTMALLSSTCAW 123
>gi|146741362|dbj|BAF62336.1| DNA-repair protein complementing XP-D cells [Sus scrofa]
Length = 756
Score = 40.0 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 8 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 55
>gi|426243940|ref|XP_004015798.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Ovis aries]
Length = 759
Score = 40.0 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 52 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 99
>gi|119936449|gb|ABM06129.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 protein [Bos taurus]
Length = 773
Score = 40.0 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 25 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 72
>gi|348557833|ref|XP_003464723.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Cavia porcellus]
Length = 760
Score = 39.7 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|444730736|gb|ELW71110.1| TFIIH basal transcription factor complex helicase XPD subunit
[Tupaia chinensis]
Length = 732
Score = 39.7 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|157168345|ref|NP_001096787.1| TFIIH basal transcription factor complex helicase XPD subunit
[Bos taurus]
gi|182645388|sp|A6QLJ0.1|ERCC2_BOVIN RecName: Full=TFIIH basal transcription factor complex helicase
XPD subunit; AltName: Full=CXPD; AltName: Full=DNA
excision repair protein ERCC-2; AltName: Full=DNA
repair protein complementing XP-D cells; AltName:
Full=Xeroderma pigmentosum group D-complementing
protein
gi|151556394|gb|AAI47983.1| ERCC2 protein [Bos taurus]
gi|296477395|tpg|DAA19510.1| TPA: TFIIH basal transcription factor complex helicase subunit
[Bos taurus]
Length = 760
Score = 39.7 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|328714717|ref|XP_001943091.2| PREDICTED: Fanconi anemia group J protein homolog isoform 1
[Acyrthosiphon pisum]
Length = 918
Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
P Y Q + M + + + ESPTG+GK+L+L+C L W
Sbjct: 23 MPVRPYPSQVSMMDKVIRGCQRQQNCLLESPTGSGKTLALLCSALAW 69
>gi|31542614|ref|NP_031975.2| TFIIH basal transcription factor complex helicase XPD subunit
[Mus musculus]
gi|341940664|sp|O08811.2|ERCC2_MOUSE RecName: Full=TFIIH basal transcription factor complex helicase
XPD subunit; AltName: Full=CXPD; AltName: Full=DNA
excision repair protein ERCC-2; AltName: Full=DNA
repair protein complementing XP-D cells; AltName:
Full=Xeroderma pigmentosum group D-complementing
protein
gi|26349935|dbj|BAC38607.1| unnamed protein product [Mus musculus]
gi|148691193|gb|EDL23140.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Mus musculus]
Length = 760
Score = 39.3 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAY 59
>gi|346986337|ref|NP_001231320.1| TFIIH basal transcription factor complex helicase XPD subunit
[Cricetulus griseus]
gi|2495145|sp|Q60452.1|ERCC2_CRIGR RecName: Full=TFIIH basal transcription factor complex helicase
XPD subunit; AltName: Full=CXPD; AltName: Full=DNA
excision repair protein ERCC-2; AltName: Full=DNA
repair protein complementing XP-D cells; AltName:
Full=Xeroderma pigmentosum group D-complementing
protein
gi|604908|gb|AAC13749.1| nucleotide excision repair protein [Cricetulus griseus]
Length = 760
Score = 39.3 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAY 59
>gi|2114484|gb|AAB58296.1| DNA helicase [Mus musculus]
Length = 760
Score = 39.3 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAY 59
>gi|289802977|ref|NP_001166280.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Rattus norvegicus]
gi|149056774|gb|EDM08205.1| rCG54110 [Rattus norvegicus]
Length = 760
Score = 39.3 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAY 59
>gi|367008340|ref|XP_003678670.1| hypothetical protein TDEL_0A01270 [Torulaspora delbrueckii]
gi|359746327|emb|CCE89459.1| hypothetical protein TDEL_0A01270 [Torulaspora delbrueckii]
Length = 775
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YYD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYKYMCDIKKTLDAGGNSILEMPSGTGKTVSLLSLTIAYQLHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|365760988|gb|EHN02666.1| Rad3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 775
Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YYD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYKYMCDIKRTLDVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|339637807|emb|CCC16783.1| putative DNA helicase [Lactobacillus pentosus IG1]
Length = 798
Score = 39.3 bits (90), Expect = 0.92, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 23/148 (15%)
Query: 25 FPFPFDAYDI-QSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
PFPF A+ Q +Y T+ N E+PTGTGK++S + +K + I L
Sbjct: 183 LPFPFPAFRPGQHELAAAVYKTIRNQTRLFVEAPTGTGKTISTLFPAIKAMGEDVIERLF 242
Query: 84 KIEAKIKDLEISKNET--VSEDWIEQQSFELKMRNQI--------------------DAL 121
+ AK +++ +S D ++ +S L ++QI D L
Sbjct: 243 YLTAKQSTRRVAEEAITLMSHDGLKLKSITLTAKDQIRFPEEQDVLPEDNPFMLGYYDRL 302
Query: 122 KDALKSQKTYDELIENIRKQNEKRKKSL 149
K ALK T+++ I + RK +L
Sbjct: 303 KPALKDLLTHEDQITRAVIETYARKHTL 330
>gi|18026950|gb|AAL55708.1| RAD3-like DNA helicase [Plasmodium falciparum]
Length = 1056
Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
E FP+D Y Q +MK L TLD+ + E PTGTGK++++ I + Y K
Sbjct: 10 EIFFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQYHKK 65
>gi|68069513|ref|XP_676668.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496467|emb|CAH97769.1| hypothetical protein PB000523.02.0 [Plasmodium berghei]
Length = 363
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYY 75
E FP+D Y Q +MK L TLD+ + E PTGTGK++++ I + Y
Sbjct: 10 EIFFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQY 62
>gi|124507219|ref|XP_001352206.1| DNA excision-repair helicase, putative [Plasmodium falciparum
3D7]
gi|23505236|emb|CAD52016.1| DNA excision-repair helicase, putative [Plasmodium falciparum
3D7]
Length = 1056
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
E FP+D Y Q +MK L TLD+ + E PTGTGK++++ I + Y K
Sbjct: 10 EIFFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQYHKK 65
>gi|392947594|ref|ZP_10313228.1| ATP-dependent helicase, DinG family [Lactobacillus pentosus KCA1]
gi|392437163|gb|EIW15053.1| ATP-dependent helicase, DinG family [Lactobacillus pentosus KCA1]
Length = 798
Score = 38.9 bits (89), Expect = 0.95, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 23/148 (15%)
Query: 25 FPFPFDAYDI-QSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
PFPF A+ Q +Y T+ N E+PTGTGK++S + +K + I L
Sbjct: 183 LPFPFPAFRPGQHELAAAVYKTIRNQTRLFVEAPTGTGKTISTLFPAIKAMGEDVIERLF 242
Query: 84 KIEAKIKDLEISKNET--VSEDWIEQQSFELKMRNQI--------------------DAL 121
+ AK +++ +S D ++ +S L ++QI D L
Sbjct: 243 YLTAKQSTRRVAEEAVTLMSHDGLKLKSITLTAKDQIRFPEEQDVLPEDNPFMLGYYDRL 302
Query: 122 KDALKSQKTYDELIENIRKQNEKRKKSL 149
K ALK T+++ I + RK +L
Sbjct: 303 KPALKDLLTHEDQITRAVIETYARKHTL 330
>gi|444320679|ref|XP_004180996.1| hypothetical protein TBLA_0E04230 [Tetrapisispora blattae CBS
6284]
gi|387514039|emb|CCH61477.1| hypothetical protein TBLA_0E04230 [Tetrapisispora blattae CBS
6284]
Length = 779
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YYD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYQYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|334881450|emb|CCB82325.1| putative DNA helicase [Lactobacillus pentosus MP-10]
Length = 798
Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 23/148 (15%)
Query: 25 FPFPFDAYDI-QSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
PFPF A+ Q +Y T+ N E+PTGTGK++S + +K + I L
Sbjct: 183 LPFPFPAFRPGQHELAAAVYKTIRNQTRLFVEAPTGTGKTISTLFPAIKAMGEDVIERLF 242
Query: 84 KIEAKIKDLEISKNET--VSEDWIEQQSFELKMRNQI--------------------DAL 121
+ AK +++ +S D ++ +S L ++QI D L
Sbjct: 243 YLTAKQSTRRVAEEAITLMSHDGLKLKSITLTAKDQIRFPEEQDVLPEDNPFMLGYYDRL 302
Query: 122 KDALKSQKTYDELIENIRKQNEKRKKSL 149
K ALK T+++ I + RK +L
Sbjct: 303 KPALKDLLTHEDQITRAVIETYARKHTL 330
>gi|82597077|ref|XP_726529.1| RAD3-like DNA helicase [Plasmodium yoelii yoelii 17XNL]
gi|23481970|gb|EAA18094.1| RAD3-like DNA helicase-related [Plasmodium yoelii yoelii]
Length = 1032
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYY 75
E FP+D Y Q +MK L TLD+ + E PTGTGK++++ I + Y
Sbjct: 10 EIFFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQY 62
>gi|301094332|ref|XP_002896272.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109667|gb|EEY67719.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 988
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
EFP + Q M + L + + ESPTG+GK+L+L+C L +
Sbjct: 17 EFPQGKRPFPAQFAVMNKVLTALKTEQHALLESPTGSGKTLALLCSSLTF 66
>gi|432328752|ref|YP_007246896.1| DNA helicase, Rad3 [Aciduliprofundum sp. MAR08-339]
gi|432135461|gb|AGB04730.1| DNA helicase, Rad3 [Aciduliprofundum sp. MAR08-339]
Length = 607
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 33/53 (62%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI 79
FP++ +Q ++++ L+NS +FE+PTG+GK+++ + +K+ H +
Sbjct: 3 FPYEFRKVQRTIVRDIENALENSFHMVFEAPTGSGKTIATLYPSVKYALKHGM 55
>gi|296417607|ref|XP_002838444.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634383|emb|CAZ82635.1| unnamed protein product [Tuber melanosporum]
Length = 807
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 14/91 (15%)
Query: 61 GKSLSLICGILKWYYDHKIVGLEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDA 120
GKSLSLICG L W +HK + IE+++K+ + + DW++Q + + K +N
Sbjct: 24 GKSLSLICGALTWLREHKS---KSIESQLKE---DGEDDGAPDWVKQFARDEKKQN---- 73
Query: 121 LKDALKSQKTYDELIENIRKQNEKRKKSLRN 151
L+ + + + +IR++ EKR+K L N
Sbjct: 74 ---LLQEKADMEARLADIREK-EKREKQLAN 100
>gi|296126128|ref|YP_003633380.1| MATE efflux family protein [Brachyspira murdochii DSM 12563]
gi|296017944|gb|ADG71181.1| MATE efflux family protein [Brachyspira murdochii DSM 12563]
Length = 616
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 96 KNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNEKRKKSLRNDQEV 155
KN +D+I+ KMRN++ +KD +K ++ IE I K E+ +K+ + ++
Sbjct: 477 KNIGKRKDYIQ------KMRNKLSKIKDPVKLVLFREKEIEKIEKMQEREEKAKKREEMR 530
Query: 156 KVHALTYRNRMDEKNSKEKRKEEER 180
++ ++ +++E K + +ER
Sbjct: 531 RLERAEWKMQLEEIKEKRDKINQER 555
>gi|339265705|ref|XP_003366015.1| fanconi anemia group J protein [Trichinella spiralis]
gi|316965098|gb|EFV49922.1| fanconi anemia group J protein [Trichinella spiralis]
Length = 824
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y Q M TL +S+ + ESPTGTGKS
Sbjct: 15 FPFSPYPAQKAIMDRTLRTLKHSQNCLVESPTGTGKS 51
>gi|428782213|ref|YP_007111973.1| central tail fiber [Enterobacteria phage HK446]
gi|383395208|gb|AFH20648.1| central tail fiber [Enterobacteria phage HK446]
Length = 1151
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 95 SKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNEKRKKSLRNDQE 154
S NE+ +W+ Q+ + + + D + + +K T+ +LIEN NEK
Sbjct: 799 SGNESGYTEWVRGQA-SIDVSDITDVILEDMKGSDTFKDLIENAVDSNEK---------- 847
Query: 155 VKVHALTYRNRMDEKNSKEKRKEEERDGLENETQELDE 192
+ A +N DE + K +E DGL ++DE
Sbjct: 848 IAGMADEIKNHADELEQQAKDIQENADGLAQAEVKIDE 885
>gi|428782274|ref|YP_007112033.1| central tail fiber J [Enterobacterial phage mEp234]
gi|392506006|gb|AFM76299.1| central tail fiber J [Enterobacterial phage mEp234]
Length = 1151
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 95 SKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNEKRKKSLRNDQE 154
S NE+ +W+ Q+ + + + D + + +K T+ +LIEN NEK
Sbjct: 799 SGNESGYTEWVRGQA-SIDVSDITDVILEDMKGSDTFKDLIENAVDSNEK---------- 847
Query: 155 VKVHALTYRNRMDEKNSKEKRKEEERDGLENETQELDE 192
+ A +N DE + K +E DGL ++DE
Sbjct: 848 IAGMADEIKNHADELEQQAKDIQENADGLAQAEVKIDE 885
>gi|428765634|ref|YP_007111457.1| central tail fiber [Enterobacteria phage mEpX2]
gi|392505626|gb|AFM75925.1| central tail fiber [Enterobacteria phage mEpX2]
Length = 1151
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 95 SKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQNEKRKKSLRNDQE 154
S NE+ +W+ Q+ + + + D + + +K T+ +LIEN NEK
Sbjct: 799 SGNESGYTEWVRGQA-SIDVSDITDVILEDMKGSDTFKDLIENAVDSNEK---------- 847
Query: 155 VKVHALTYRNRMDEKNSKEKRKEEERDGLENETQELDE 192
+ A +N DE + K +E DGL ++DE
Sbjct: 848 IAGMADEIKNHADELEQQAKDIQENADGLAQAEVKIDE 885
>gi|237830677|ref|XP_002364636.1| WW domain-containing protein [Toxoplasma gondii ME49]
gi|211962300|gb|EEA97495.1| WW domain-containing protein [Toxoplasma gondii ME49]
Length = 3555
Score = 37.7 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 15/116 (12%)
Query: 83 EKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDEL-----IEN 137
E+ E +D E+ + + + E+ EQ+ +R + DA++ AL+ + EL +E
Sbjct: 2437 ERGELDKRDREMQEVDVLKEELAEQRKL---LREKEDAIQTALEREARERELWTMQRVEE 2493
Query: 138 IRKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERDGLENETQELDES 193
+K E+R+ LR + K H+ DE N+K K+KE+E Q+L E+
Sbjct: 2494 SQKGREEREMHLRERETWKRHS-------DEVNAKLKKKEDECSRSTARIQKLREA 2542
>gi|449519583|ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein homolog [Cucumis
sativus]
Length = 1239
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYYDHKI 79
FPF Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W ++KI
Sbjct: 34 FPFRPYGSQLAFMGRVISTLDRAQREGHCHALLESPTGTGKSLSLLCSSLAWQKNYKI 91
>gi|449455724|ref|XP_004145601.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Cucumis sativus]
Length = 1027
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYYDHKI 79
FPF Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W ++KI
Sbjct: 34 FPFRPYGSQLEFMDRVISTLDRAQREGHCHALLESPTGTGKSLSLLCSSLAWQKNYKI 91
>gi|410046333|ref|XP_003952169.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase
DDX12-like [Pan troglodytes]
Length = 920
Score = 37.4 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 24/157 (15%)
Query: 51 FGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK----IEAKIKDLEISKNETV------ 100
F + P GKSLSLICG L W D + E+ +E L K+E++
Sbjct: 33 FSVAILPAKKGKSLSLICGALSWLRDFEQKKREEEARLLETGTGPLHDEKDESLCLSSSC 92
Query: 101 -----------SEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENI--RKQNEKRKK 147
W+ Q + + R+ +D LK +K +E ++ + R Q + K
Sbjct: 93 EGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKVEQARRKQREERLQQLQHRVQLKYAAK 152
Query: 148 SLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERDGLE 184
LR ++E + + L M E + +R E+ G E
Sbjct: 153 RLRQEEETE-NLLRLSREMLETGPEAERLEQLESGEE 188
>gi|84999674|ref|XP_954558.1| rad3-like DNA helicase-related [Theileria annulata]
gi|65305556|emb|CAI73881.1| rad3-like DNA helicase-related, putative [Theileria annulata]
Length = 894
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSL 66
FP+P Y Q +MK+L LD+ + E PTGTGK+++L
Sbjct: 13 FPYP-KIYPEQIAYMKSLKNVLDSKGHAVLEMPTGTGKTVAL 53
>gi|403338080|gb|EJY68268.1| hypothetical protein OXYTRI_11217 [Oxytricha trifallax]
Length = 779
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------YYDHKIVGLEKIEA 87
MK L TLD+ I E PTGTGK++ L+ IL + Y IV +EK
Sbjct: 1 MKELKKTLDSEGHAILEMPTGTGKTVCLLSLILSYIKAKKPNFKLIYCTRTIVEMEKTLE 60
Query: 88 KIKDLEISKNETVSEDWIEQQSFE 111
++K + + + D QQ F+
Sbjct: 61 ELKFVLEQREKDFPSDQSHQQQFQ 84
>gi|221507515|gb|EEE33119.1| WW domain-containing protein, putative [Toxoplasma gondii VEG]
Length = 3494
Score = 36.6 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 15/102 (14%)
Query: 83 EKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQIDALKDALKSQKTYDEL-----IEN 137
E+ E +D E+ + + + E+ EQ+ +R + DA++ AL+ + EL +E
Sbjct: 2437 ERGELDKRDREMQEVDVLKEELAEQRKL---LREKEDAIQTALEREARERELWTMQRVEE 2493
Query: 138 IRKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEE 179
+K E+R+ LR + K H+ DE N+K K+KE+E
Sbjct: 2494 SQKGREEREMHLRERETWKRHS-------DEVNAKLKKKEDE 2528
>gi|448820026|ref|YP_007413188.1| DNA helicase [Lactobacillus plantarum ZJ316]
gi|448273523|gb|AGE38042.1| DNA helicase [Lactobacillus plantarum ZJ316]
Length = 789
Score = 36.6 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 23/149 (15%)
Query: 24 EFPFPFDAYDI-QSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGL 82
+ PFPF A+ Q +Y T+ K E+PTGTGK++S + +K + I L
Sbjct: 182 DLPFPFPAFRPGQHELAGAVYKTIRLQKRLFVEAPTGTGKTISTLFPAIKAMGEDVIERL 241
Query: 83 EKIEAKIKDLEISKNET--VSEDWIEQQSFELKMRNQI--------------------DA 120
+ AK +++ +S D ++ +S L ++QI D
Sbjct: 242 FYLTAKQSTRHVAEEAVTLMSHDGLKLKSITLTAKDQIRFPEEQDVLPEDNPYMIGYYDR 301
Query: 121 LKDALKSQKTYDELIENIRKQNEKRKKSL 149
LK ALK T+++ I + RK ++
Sbjct: 302 LKPALKDLLTHEDQITRSVIEQYARKHTV 330
>gi|241950049|ref|XP_002417747.1| morphogenesis/filamentation protein, putative [Candida dubliniensis
CD36]
gi|223641085|emb|CAX45460.1| morphogenesis/filamentation protein, putative [Candida dubliniensis
CD36]
Length = 965
Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 23/169 (13%)
Query: 30 DAYDIQSNFMKNLYYTLDNSKFGIFESPTGT--------GKSLSLICGILKWYYDHKIVG 81
D +++ +++N+Y T++ +F SPTG+ K+ S G D I G
Sbjct: 319 DDNGVRTPYLENIYSTMN--QFQKINSPTGSLFFERKSSSKNSSATNGASSKELDENIQG 376
Query: 82 ----LEKIEAKIKDLEISKNETVSEDWIEQQSFELKMRNQ--IDALKDALKSQKTYDELI 135
+K++ IKD+EI+K ++ D I+Q+ LK Q +DA Q D
Sbjct: 377 KLQKQKKLDLAIKDIEIAK-ISLDNDMIKQE-MNLKSIQQKIVDAESKLSNLQYDQDRKT 434
Query: 136 ENIRKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERDGLE 184
++I+ +NE++ K L N+ H TYR+ ++ K K E+E LE
Sbjct: 435 KSIQYENEEKIKQLINE-----HERTYRSLDEQHQQKIKSLEQEHTSLE 478
>gi|393796119|ref|ZP_10379483.1| polysaccharide deacetylase [Candidatus Nitrosoarchaeum limnia BG20]
Length = 281
Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 102 EDWIEQQSFELKMRNQIDALKDALKSQKTYDELI---ENIRKQNEKRKKSLRNDQEVKVH 158
+ ++ +++ ELK+ ID + D L+ +T+ E + K+ E K + N E+ H
Sbjct: 27 QKYLPKKNHELKIIYGIDKMLDWLRKNETFATFFMVGELLEKKPELLDKIIENGHEIAFH 86
Query: 159 ALTYRNRMDEKNSKEKRKEE 178
+ + NR+D+ N KEK ++E
Sbjct: 87 TMQH-NRLDDNNFKEKFEKE 105
>gi|328770876|gb|EGF80917.1| hypothetical protein BATDEDRAFT_1044 [Batrachochytrium
dendrobatidis JAM81]
Length = 639
Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 22/152 (14%)
Query: 45 TLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKI----VGLEKIEAKIKDLEISKNETV 100
L S+ + ESPTGTGK+L+++ +L W + + E K K L NE++
Sbjct: 4 ALKESENALLESPTGTGKTLTILTAVLAWREAERTNITNIRTEHFNEKSKAL----NESI 59
Query: 101 SEDWIEQQSFELKMRNQIDALKDALKSQKTYDELIENIRKQ-----NEKRKKSLRNDQE- 154
+I ++ + QI + L+ + TY I + + N + K+S +E
Sbjct: 60 PTIFIASRT-----QKQIQQIVRELREKSTYRPRISILGSREHYCINPQLKRSTNKGEEC 114
Query: 155 ---VKVHALTYRNRMDEKNSKEKRKEEERDGL 183
++ + Y NR + K + EER+ +
Sbjct: 115 TSLIETDSCGYFNRTRQLQGHAKIQGEERNAI 146
>gi|339265251|ref|XP_003366249.1| fanconi anemia group J protein [Trichinella spiralis]
gi|316960356|gb|EFV47942.1| fanconi anemia group J protein [Trichinella spiralis]
Length = 71
Score = 35.8 bits (81), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y Q M TL +S+ + ESPTGTGKS
Sbjct: 15 FPFSPYPAQKAIMDRTLRTLKHSQNCLVESPTGTGKS 51
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.129 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,020,739,460
Number of Sequences: 23463169
Number of extensions: 126505300
Number of successful extensions: 816458
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 6465
Number of HSP's that attempted gapping in prelim test: 771210
Number of HSP's gapped (non-prelim): 41496
length of query: 194
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 59
effective length of database: 9,191,667,552
effective search space: 542308385568
effective search space used: 542308385568
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 72 (32.3 bits)