BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14272
(194 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14147|CHL1_SCHPO ATP-dependent RNA helicase chl1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=chl1 PE=3 SV=1
Length = 844
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 79/133 (59%), Gaps = 15/133 (11%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGL 82
+ F P+ YDIQ FM++LY ++ + K GIFESPTGTGKSLSLIC L W +H V L
Sbjct: 11 TNFHHPYTPYDIQLEFMRSLYSSISDGKIGIFESPTGTGKSLSLICASLTWLDEHGGVLL 70
Query: 83 EKIEAKIKDLEISKNETVSE--DWIEQQSFELKMRNQIDALKDALK-SQKTYDELIENIR 139
E E K D +K+ T S+ DW+ +Q +++ KD +K + ++ +E IR
Sbjct: 71 EDNE-KSND---NKSNTSSKIPDWVLEQDLKIQ--------KDLVKETHARLEQRLEEIR 118
Query: 140 KQNEKRKKSLRND 152
K+N+ RK + N+
Sbjct: 119 KRNQSRKNQMSNN 131
>sp|A8MPP1|D11L8_HUMAN Putative ATP-dependent RNA helicase DDX11-like protein 8 OS=Homo
sapiens GN=DDX11L8 PE=3 SV=1
Length = 907
Score = 84.3 bits (207), Expect = 4e-16, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAKIKDLEISKNETV-----------------SEDWIEQQSFELKMRNQIDALKD 123
+E L K+E++ W+ Q + + R+ +D LK
Sbjct: 73 EARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKV 132
Query: 124 ALKSQKTYDELIENI--RKQNEKRKKSLRNDQEVKVHALTYRNRMDEKNSKEKRKEEERD 181
+K +E ++ + R Q + K LR ++E + L M E + +R E+
Sbjct: 133 EQARRKQREERLQQLQHRVQLKYAAKRLRQEEEETENLLRLSREMLETGPEAERLEQLES 192
Query: 182 GLE 184
G E
Sbjct: 193 GEE 195
>sp|Q1E5T3|CHL1_COCIM ATP-dependent RNA helicase CHL1 OS=Coccidioides immitis (strain
RS) GN=CHL1 PE=3 SV=1
Length = 861
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK-IVGLE 83
F P+ YDIQ FM++LY ++ K GIFESPTGTGKSLSLICG L W DHK V LE
Sbjct: 8 FYHPYSPYDIQVQFMRSLYTCIEECKVGIFESPTGTGKSLSLICGSLTWLRDHKRSVFLE 67
Query: 84 KIE 86
IE
Sbjct: 68 DIE 70
>sp|Q96FC9|DDX11_HUMAN Probable ATP-dependent RNA helicase DDX11 OS=Homo sapiens GN=DDX11
PE=1 SV=1
Length = 970
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 79/168 (47%), Gaps = 34/168 (20%)
Query: 13 NEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILK 72
NE + + + FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L
Sbjct: 3 NETQKVGAI--HFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALS 60
Query: 73 WYYDHKIVGLEK----IEAKIKDLEISKNETV-----------------SEDWIEQQSFE 111
W D + E+ +E L K+E++ W+ Q +
Sbjct: 61 WLRDFEQKKREEEARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQK 120
Query: 112 LKMRNQIDALKDALKSQKTYDELIENIRKQNEKRKKSLRNDQEVKVHA 159
+ R+ +D LK + RKQ E+R + L++ ++K A
Sbjct: 121 KEERDLVDRLKAE-----------QARRKQREERLQQLQHRVQLKYAA 157
>sp|A1D8E4|CHL1_NEOFI ATP-dependent RNA helicase chl1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=chl1
PE=3 SV=1
Length = 861
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
P F P+ YDIQ FM+ LY L+ K +FESPTGTGKSLSLICG + W +HK
Sbjct: 5 PQNFNHPYSPYDIQLQFMRALYTCLEEGKVAVFESPTGTGKSLSLICGSMTWLREHK 61
>sp|A2QY22|CHL1_ASPNC ATP-dependent RNA helicase chl1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=chl1 PE=3 SV=1
Length = 874
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 37/55 (67%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+F P+ YDIQ M+ LY L+ K +FESPTGTGKSLSLICG L W DHK
Sbjct: 7 DFHHPYSPYDIQLQLMRALYSCLEQGKVAVFESPTGTGKSLSLICGSLTWLRDHK 61
>sp|A5DUW8|CHL1_LODEL ATP-dependent RNA helicase CHL1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=CHL1 PE=3 SV=1
Length = 892
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYY 75
P A ++ P+D YDIQ FM LY TL N K G+FESPTGTGK+LS+IC + W
Sbjct: 7 PSARTCRDYHHPYDPYDIQLQFMDALYETLQNGYKIGMFESPTGTGKTLSIICSSMTWLR 66
Query: 76 DHK 78
D+K
Sbjct: 67 DYK 69
>sp|Q6CAX3|CHL1_YARLI ATP-dependent RNA helicase CHL1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=CHL1 PE=3 SV=1
Length = 803
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
EF P+ Y IQ +FM+ LY +++ K GIFESPTGTGK+LSLICG + W L
Sbjct: 8 EFSHPYTPYPIQVDFMEALYDCIESYKVGIFESPTGTGKTLSLICGSMTW--------LR 59
Query: 84 KIEAKIKDLEISKNETVSEDWIEQQSFEL 112
K +A++ S +E W+ +Q+ +L
Sbjct: 60 KNKAQLAVSTASADEN-EPAWVLEQTIQL 87
>sp|A7ERG1|CHL1_SCLS1 ATP-dependent RNA helicase CHL1 OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=CHL1 PE=3 SV=1
Length = 902
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 36/55 (65%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+F P+ Y IQ FM+ +Y L+ K GI ESPTGTGKSLSLICG L W D K
Sbjct: 18 DFHHPYTPYPIQEKFMQTVYDVLEQGKIGILESPTGTGKSLSLICGSLTWLRDFK 72
>sp|Q6CIF0|CHL1_KLULA ATP-dependent RNA helicase CHL1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=CHL1 PE=3 SV=1
Length = 807
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
F P+ YDIQ+ M+++Y L++ K GIFESPTGTGK+LSLIC + W +HK LE
Sbjct: 5 FHHPYQPYDIQTQLMEHIYELLNSGKKVGIFESPTGTGKTLSLICSTVTWLREHK---LE 61
Query: 84 KIEAKI 89
K+ +K+
Sbjct: 62 KLNSKV 67
>sp|Q6BZD9|CHL1_DEBHA ATP-dependent RNA helicase CHL1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CHL1 PE=3 SV=2
Length = 820
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 28 PFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
PF+ YDIQ M +Y +DN K G+FESPTGTGK+LSLIC + W ++K
Sbjct: 19 PFEPYDIQIQLMDAIYDAIDNYKIGLFESPTGTGKTLSLICSSMTWLREYK 69
>sp|A3LN13|CHL1_PICST ATP-dependent RNA helicase CHL1 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=CHL1 PE=3 SV=2
Length = 835
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYYDHK 78
+ P+ YDIQ M +Y T+DN K G+FESPTGTGK+LS+IC + W D+K
Sbjct: 12 YSHPYKPYDIQIQLMDAIYDTIDNGYKIGLFESPTGTGKTLSIICSTMTWLRDYK 66
>sp|Q750G3|CHL1_ASHGO ATP-dependent RNA helicase CHL1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CHL1
PE=3 SV=1
Length = 801
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYYDHK 78
EF PF Y IQ M+ +Y L++ K GIFESPTGTGK+LSLIC W +HK
Sbjct: 4 CEFYHPFTPYRIQLELMQQIYGLLESGKKMGIFESPTGTGKTLSLICSTFTWLREHK 60
>sp|Q6FKT4|CHL1_CANGA ATP-dependent RNA helicase CHL1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CHL1 PE=3 SV=1
Length = 830
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYYDHK 78
++F P+ YDIQ + M+ +Y TL N K I ESPTGTGK+LSLIC L W D+K
Sbjct: 5 TKFHHPYSPYDIQLDLMQCVYDTLANPVKKVAIVESPTGTGKTLSLICSTLTWLRDNK 62
>sp|Q16X92|RTEL1_AEDAE Regulator of telomere elongation helicase 1 homolog OS=Aedes
aegypti GN=AAEL008960 PE=3 SV=1
Length = 1010
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLEKIE 86
FPF+ Y +Q ++M + L NS G+ ESPTGTGK+LSL+C L W K +
Sbjct: 13 FPFEPYQVQRDYMSRVIECLQNSTNGVLESPTGTGKTLSLLCSSLAWVLHKKAQVQANMR 72
Query: 87 AKIKDLE 93
I DL+
Sbjct: 73 TNITDLK 79
>sp|Q6AXC6|DDX11_MOUSE Probable ATP-dependent RNA helicase DDX11 OS=Mus musculus
GN=Ddx11 PE=2 SV=1
Length = 880
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/43 (67%), Positives = 31/43 (72%)
Query: 34 IQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 22 IQKDFMAELYKVLEGGKIGIFESPTGTGKSLSLICGALSWLRD 64
>sp|B4JNS2|RTEL1_DROGR Regulator of telomere elongation helicase 1 homolog OS=Drosophila
grimshawi GN=GH24089 PE=3 SV=1
Length = 986
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + YD+Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYDVQRAYMEKVIICLRDGTNGVLESPTGTGKTLSLLCSTLGW 59
>sp|A6ZWN8|CHL1_YEAS7 ATP-dependent RNA helicase CHL1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=CHL1 PE=3 SV=1
Length = 861
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
F P+ YDIQ M+ +Y L + K I ESPTGTGK+LSLIC + W +K
Sbjct: 10 FYHPYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNKADIFT 69
Query: 84 KIEAKIKDLEISKNETVSE---DWIEQQSFELKMRNQIDALKD 123
++E IK E +E +S+ DW+ + ++ ++D L D
Sbjct: 70 RMETNIKTNE-DDSENLSDDEPDWVIDTYRKSVLQEKVDLLND 111
>sp|P22516|CHL1_YEAST ATP-dependent RNA helicase CHL1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CHL1 PE=1 SV=1
Length = 861
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYYDHKIVGLE 83
F P+ YDIQ M+ +Y L + K I ESPTGTGK+LSLIC + W +K
Sbjct: 10 FYHPYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNKADIFT 69
Query: 84 KIEAKIKDLEISKNETVSE---DWIEQQSFELKMRNQIDALKD 123
++E IK E +E +S+ DW+ + ++ ++D L D
Sbjct: 70 RMETNIKTNE-DDSENLSDDEPDWVIDTYRKSVLQEKVDLLND 111
>sp|B0W9F4|RTEL1_CULQU Regulator of telomere elongation helicase 1 homolog OS=Culex
quinquefasciatus GN=CPIJ003765 PE=3 SV=1
Length = 978
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
FPF+ Y +Q ++M + L NS G+ ESPTGTGK+LSL+C L W K
Sbjct: 13 FPFEPYQVQRDYMARVIECLQNSSNGVLESPTGTGKTLSLLCSSLAWILHKK 64
>sp|B4L1Z2|RTEL1_DROMO Regulator of telomere elongation helicase 1 homolog OS=Drosophila
mojavensis GN=GI15901 PE=3 SV=1
Length = 1014
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y++Q FM+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYEVQRAFMEKVIMCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>sp|B4GU19|RTEL1_DROPE Regulator of telomere elongation helicase 1 homolog OS=Drosophila
persimilis GN=GL14463 PE=3 SV=1
Length = 1009
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y++Q ++M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYNVQRDYMEKVIICLRDGTNGVLESPTGTGKTLSLLCASLAW 59
>sp|B4NDG5|RTEL1_DROWI Regulator of telomere elongation helicase 1 homolog OS=Drosophila
willistoni GN=GK24923 PE=3 SV=1
Length = 998
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y++Q FM+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYEVQRAFMEKVIICLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>sp|Q29FS3|RTEL1_DROPS Regulator of telomere elongation helicase 1 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA17940 PE=3 SV=2
Length = 1009
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y++Q ++M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYNVQRDYMEKVIICLRDGTNGVLESPTGTGKTLSLLCASLAW 59
>sp|Q7QEI1|RTEL1_ANOGA Regulator of telomere elongation helicase 1 homolog OS=Anopheles
gambiae GN=AGAP000634 PE=3 SV=5
Length = 991
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
FPF+ Y++Q N+M + L N G+ ESPTGTGK+LSL+C + W K
Sbjct: 13 FPFEPYELQKNYMAKVIECLQNKTNGVLESPTGTGKTLSLLCSSMAWLLHMK 64
>sp|Q5AD67|CHL1_CANAL ATP-dependent RNA helicase CHL1 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=CHL1 PE=3 SV=1
Length = 842
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 28 PFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKW 73
P+ YDIQ M +Y T++N K G+FESPTGTGK+LS+IC + W
Sbjct: 13 PYTPYDIQIQLMDAIYNTIENGYKIGLFESPTGTGKTLSIICSSMTW 59
>sp|A5DNW6|CHL1_PICGU ATP-dependent RNA helicase CHL1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 /
NBRC 10279 / NRRL Y-324) GN=CHL1 PE=3 SV=2
Length = 825
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 28 PFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYYDHK 78
P+ YDIQ M +Y T+ N K G+FESPTGTGK+LS+IC + W ++K
Sbjct: 13 PYKPYDIQVQLMDAIYDTIQNKYKVGLFESPTGTGKTLSIICSSMTWLRNYK 64
>sp|B4I0K4|RTEL1_DROSE Regulator of telomere elongation helicase 1 homolog OS=Drosophila
sechellia GN=GM12432 PE=3 SV=1
Length = 966
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y +Q +M+ + + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>sp|Q9W484|RTEL1_DROME Regulator of telomere elongation helicase 1 homolog OS=Drosophila
melanogaster GN=CG4078 PE=1 SV=1
Length = 985
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y +Q +M+ + + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>sp|B4M891|RTEL1_DROVI Regulator of telomere elongation helicase 1 homolog OS=Drosophila
virilis GN=GJ16649 PE=3 SV=1
Length = 1005
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y++Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYEVQRAYMEKVIMCLRDGTNGVLESPTGTGKTLSLLCASLAW 59
>sp|Q93575|RTEL1_CAEEL Regulator of telomere elongation helicase 1 homolog
OS=Caenorhabditis elegans GN=rtel-1 PE=3 SV=3
Length = 994
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y+ Q FMKN+ LD ESPTGTGK+LSL+C L W
Sbjct: 21 FPFEPYECQRIFMKNVVDVLDRKLDAALESPTGTGKTLSLLCSTLAW 67
>sp|Q92771|DDX12_HUMAN Putative ATP-dependent RNA helicase DDX12 OS=Homo sapiens
GN=DDX12P PE=5 SV=3
Length = 950
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/42 (64%), Positives = 30/42 (71%)
Query: 35 QSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYD 76
+ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 42 KEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 83
>sp|A8WS58|RTEL1_CAEBR Regulator of telomere elongation helicase 1 homolog
OS=Caenorhabditis briggsae GN=rtel-1 PE=3 SV=1
Length = 994
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y+ Q FMKN+ LD ESPTGTGK+LSL+C L W
Sbjct: 21 FPFEPYECQRIFMKNVIDVLDMKLDAALESPTGTGKTLSLLCSTLAW 67
>sp|B3MSG8|RTEL1_DROAN Regulator of telomere elongation helicase 1 homolog OS=Drosophila
ananassae GN=GF20802 PE=3 SV=1
Length = 994
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y +Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYPVQRAYMEKVIQCLKDGTNGVLESPTGTGKTLSLLCSSLAW 59
>sp|B4PZB4|RTEL1_DROYA Regulator of telomere elongation helicase 1 homolog OS=Drosophila
yakuba GN=GE16425 PE=3 SV=1
Length = 985
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y +Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>sp|B3NSW1|RTEL1_DROER Regulator of telomere elongation helicase 1 homolog OS=Drosophila
erecta GN=GG18780 PE=3 SV=1
Length = 985
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y +Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>sp|A7TTL0|CHL1_VANPO ATP-dependent RNA helicase CHL1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=CHL1 PE=3 SV=1
Length = 829
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYYDHKI 79
F P+ Y+IQ M+ +Y L + K I ESPTGTGK+LSL+C + W D+K+
Sbjct: 5 FNHPYQPYEIQLQLMQCIYGALSSGKKIAILESPTGTGKTLSLLCSSITWLRDNKL 60
>sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio
GN=rtel1 PE=3 SV=1
Length = 1177
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYYDH 77
FPF Y Q ++M + L G+ ESPTGTGK+L L+C L W DH
Sbjct: 13 FPFTPYPCQEDYMSKVIECLQKKVNGVLESPTGTGKTLCLLCSTLAW-RDH 62
>sp|Q5SXJ3|FANCJ_MOUSE Fanconi anemia group J protein homolog OS=Mus musculus GN=Brip1
PE=2 SV=1
Length = 1174
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 63
>sp|A7UXD4|CHL1_NEUCR ATP-dependent RNA helicase chl-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=chl-1 PE=3 SV=1
Length = 1073
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 48 NSKFGIFESPTGTGKSLSLICGILKWYYDHK 78
+++ +FESPTGTGKSLSLICG L W +HK
Sbjct: 147 HAQIALFESPTGTGKSLSLICGSLTWLRNHK 177
Score = 33.5 bits (75), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNS 49
P++F P+ Y IQ+ FM+ LY LD +
Sbjct: 32 PTDFNHPYTPYPIQTAFMQTLYSVLDRT 59
>sp|Q3YK19|FANCJ_CHICK Fanconi anemia group J protein homolog OS=Gallus gallus GN=BRIP1
PE=2 SV=1
Length = 1252
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M + L+N + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSALSW 63
>sp|Q9BX63|FANCJ_HUMAN Fanconi anemia group J protein OS=Homo sapiens GN=BRIP1 PE=1 SV=1
Length = 1249
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>sp|A4K436|RTEL1_BOVIN Regulator of telomere elongation helicase 1 OS=Bos taurus
GN=RTEL1 PE=2 SV=1
Length = 1216
Score = 50.8 bits (120), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAW 59
>sp|Q9NZ71|RTEL1_HUMAN Regulator of telomere elongation helicase 1 OS=Homo sapiens
GN=RTEL1 PE=1 SV=2
Length = 1219
Score = 50.1 bits (118), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>sp|Q0VGM9|RTEL1_MOUSE Regulator of telomere elongation helicase 1 OS=Mus musculus
GN=Rtel1 PE=2 SV=2
Length = 1203
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>sp|Q6H1L8|RTEL1_MUSSP Regulator of telomere elongation helicase 1 OS=Mus spretus
GN=Rtel1 PE=2 SV=1
Length = 1203
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>sp|Q5RJZ1|RTEL1_RAT Regulator of telomere elongation helicase 1 OS=Rattus norvegicus
GN=Rtel1 PE=2 SV=2
Length = 1274
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAW 59
>sp|Q5RE34|RTEL1_PONAB Regulator of telomere elongation helicase 1 OS=Pongo abelii
GN=RTEL1 PE=2 SV=1
Length = 1302
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 25/47 (53%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ES TGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESHTGTGKTLCLLCTTLAW 59
>sp|Q2U587|CHL1_ASPOR ATP-dependent RNA helicase chl1 OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=chl1 PE=3 SV=1
Length = 721
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLS 65
P AE EF P+ YDIQ FM+ LY ++ K +FESPTG LS
Sbjct: 3 PQAE---EFHHPYSPYDIQLQFMRALYSCIEKGKVAVFESPTGKLAGLS 48
>sp|P26659|RAD15_SCHPO DNA repair helicase rad15 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rad15 PE=1 SV=2
Length = 772
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YYD 76
++P FP+P Y Q +M +L ++LD + E P+GTGK++SL+ I+ + Y +
Sbjct: 7 DLPILFPYP-RIYPEQYQYMCDLKHSLDAGGIALLEMPSGTGKTISLLSLIVSYQQHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.129 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,606,504
Number of Sequences: 539616
Number of extensions: 3129765
Number of successful extensions: 20988
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 1037
Number of HSP's that attempted gapping in prelim test: 17825
Number of HSP's gapped (non-prelim): 3418
length of query: 194
length of database: 191,569,459
effective HSP length: 111
effective length of query: 83
effective length of database: 131,672,083
effective search space: 10928782889
effective search space used: 10928782889
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)