BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14273
(115 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|91081131|ref|XP_975541.1| PREDICTED: similar to regulator of telomere elongation helicase 1
rtel1 [Tribolium castaneum]
Length = 861
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
EVP+ F FPF Y IQ FM+NL+ ++N KFGIFESPTGTGKSLS++CG ++W DH +
Sbjct: 2 EVPNNFEFPFQPYPIQHAFMRNLFEVIENKKFGIFESPTGTGKSLSILCGAIRWLKDHNM 61
Query: 80 AGLEKIEAEIKDLEISKNETV--SEDWIEQQSFE 111
E ++ +I++LE+ K + S DW+ Q+ E
Sbjct: 62 YERENLKLQIEELELKKRKVSGNSSDWLSAQAQE 95
>gi|270006445|gb|EFA02893.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Tribolium
castaneum]
Length = 817
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
EVP+ F FPF Y IQ FM+NL+ ++N KFGIFESPTGTGKSLS++CG ++W DH +
Sbjct: 2 EVPNNFEFPFQPYPIQHAFMRNLFEVIENKKFGIFESPTGTGKSLSILCGAIRWLKDHNM 61
Query: 80 AGLEKIEAEIKDLEISKNETV--SEDWIEQQSFE 111
E ++ +I++LE+ K + S DW+ Q+ E
Sbjct: 62 YERENLKLQIEELELKKRKVSGNSSDWLSAQAQE 95
>gi|307191862|gb|EFN75286.1| Probable ATP-dependent RNA helicase DDX11 [Harpegnathos saltator]
Length = 862
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 61/93 (65%), Gaps = 4/93 (4%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH-- 77
E+P EFPFPF AY+IQ FMK LY L+ K G+FESPTGTGKSLSLICG LKW DH
Sbjct: 2 ELPQEFPFPFPAYEIQKQFMKELYNCLEGGKLGLFESPTGTGKSLSLICGALKWLVDHEK 61
Query: 78 -KIAGLEKIEAEIKDLEISKNETVSEDWIEQQS 109
K L + +EI D +I E S+DW Q+
Sbjct: 62 YKKQELSSVISEIDD-KIKNCEKPSDDWFSVQT 93
>gi|332029639|gb|EGI69528.1| Putative ATP-dependent RNA helicase DDX11-like protein [Acromyrmex
echinatior]
Length = 857
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 12/97 (12%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK- 78
E+P EFPFPF AY+IQ FM+ LY L + K G+FESPTGTGKSLSLICG LKW DH+
Sbjct: 2 ELPQEFPFPFPAYEIQKRFMRELYACLKDGKLGLFESPTGTGKSLSLICGALKWLVDHER 61
Query: 79 ------IAGLEKIEAEIKDLEISKNETVSEDWIEQQS 109
I+ + KI+ ++K E +S++W Q+
Sbjct: 62 WRKEELISTIAKIDDKLKSC-----EKLSDNWFTVQT 93
>gi|340378232|ref|XP_003387632.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Amphimedon queenslandica]
Length = 886
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
E P++FPFPF Y IQ++FM++LY TL+ K G+FESPTGTGKSLS+ICG LKW DH+
Sbjct: 5 EAPADFPFPFKPYSIQTDFMRSLYSTLEEGKVGLFESPTGTGKSLSIICGCLKWLMDHQE 64
Query: 80 AGLEKIEA----EIKDLEIS-KNE--TVSEDW 104
++ EA ++ L +S KNE +V +DW
Sbjct: 65 KETKRCEAILSGDVSVLPLSDKNEKKSVVDDW 96
>gi|242025010|ref|XP_002432919.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518428|gb|EEB20181.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 852
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAG 81
P +FPFPF+ Y IQ++ MKNLY L+ K GIFESPTGTGKS+SLICG LKW D +
Sbjct: 11 PEKFPFPFNPYLIQNDLMKNLYEALEGKKLGIFESPTGTGKSMSLICGSLKWLLDAQERI 70
Query: 82 LEKIEAEIKDLEIS-KNETVSEDWIEQQSFEPTIR 115
+E IK+L KN ++ +W+E+ S +R
Sbjct: 71 KNDLELNIKNLNDELKNTSLGSNWLEEHSSLTKLR 105
>gi|443709796|gb|ELU04301.1| hypothetical protein CAPTEDRAFT_175213 [Capitella teleta]
Length = 875
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 60/94 (63%), Gaps = 7/94 (7%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH-- 77
EVP++F FPF+ Y IQ FM NLY ++ + GIFESPTGTGKSLSLICG L W D+
Sbjct: 2 EVPAKFAFPFEPYGIQEAFMHNLYSAIEGGQMGIFESPTGTGKSLSLICGALTWLQDYEE 61
Query: 78 ----KIAGLEKIEAEIKDLEISKNETVSEDWIEQ 107
++ L I+ EIK IS+ V DW++Q
Sbjct: 62 KQRNELEALLSIKQEIKKY-ISRYAFVEPDWVQQ 94
>gi|383850034|ref|XP_003700633.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Megachile rotundata]
Length = 861
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
EFPFPF Y IQ FMK LY L+N+K GIFESPTGTGKS+S+ICG LKW DH+
Sbjct: 6 EFPFPFPPYSIQVQFMKELYNCLENAKLGIFESPTGTGKSMSIICGALKWLLDHEEFQKN 65
Query: 84 KIEAEIKDLE--ISKNETVSEDWIEQQS 109
++ I D E I K S +W Q+
Sbjct: 66 QLTKAISDFEEKIKKCTNSSTNWFSVQT 93
>gi|198436769|ref|XP_002122486.1| PREDICTED: similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide
11 [Ciona intestinalis]
Length = 907
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
PS+F FPF+ Y IQ +FMK+LY+ +++ K GIFESPTGTGKSLSLICG L W DH+
Sbjct: 13 APSKFAFPFEPYSIQVDFMKSLYHAIEDKKIGIFESPTGTGKSLSLICGSLTWLKDHEER 72
Query: 81 GLEKIEAEIKDLEISKN-ETVSEDWIEQ 107
++ + L K+ ET DWI++
Sbjct: 73 EEKRCQEITNKLTTEKSKETCDFDWIQE 100
>gi|432863481|ref|XP_004070088.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Oryzias latipes]
Length = 859
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 49/69 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFP+ YDIQ FM+ LY LD SK GIFESPTGTGKSLSLICG L W DH+ +++
Sbjct: 8 FPFPYQPYDIQEQFMQALYRALDQSKVGIFESPTGTGKSLSLICGALSWLRDHEEKTIQE 67
Query: 85 IEAEIKDLE 93
A +++ E
Sbjct: 68 AAALLQEGE 76
>gi|405976070|gb|EKC40591.1| Putative ATP-dependent RNA helicase DDX11 [Crassostrea gigas]
Length = 921
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 64/99 (64%), Gaps = 17/99 (17%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIA-GL 82
+FPFPF YD+Q FM+NLY L+ + GIFESPTGTGKSLSLICG LKW +++ + GL
Sbjct: 33 DFPFPFKPYDVQKKFMENLYLCLEKGQVGIFESPTGTGKSLSLICGALKWLKEYQASWGL 92
Query: 83 -------EKIEAEIKDLE--ISKNETVSE-------DWI 105
+KIE + K+LE I++ +T S DWI
Sbjct: 93 LKNVLIPQKIEKQKKELEELIAEEKTSSSEGASGEMDWI 131
>gi|321479246|gb|EFX90202.1| hypothetical protein DAPPUDRAFT_190335 [Daphnia pulex]
Length = 898
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 52/73 (71%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
+VP F FPF+ Y IQ +FMK+LY ++ K GIFESPTGTGKSLSLICG L W +DH+
Sbjct: 2 DVPEGFRFPFEPYPIQLDFMKSLYKCIEQGKLGIFESPTGTGKSLSLICGALTWLADHEC 61
Query: 80 AGLEKIEAEIKDL 92
++E ++K L
Sbjct: 62 HQKSQLEEKLKIL 74
>gi|449674800|ref|XP_002169756.2| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Hydra
magnipapillata]
Length = 827
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
+F FPF+ YDIQ +FM LY TL N K GIFESPTGTGKSLSLICG L+W D++I E
Sbjct: 225 DFEFPFEPYDIQKSFMSTLYETLQNDKIGIFESPTGTGKSLSLICGSLRWLFDYEIEKEE 284
Query: 84 KIEAEI 89
KI++ I
Sbjct: 285 KIKSII 290
>gi|380016559|ref|XP_003692248.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Apis
florea]
Length = 856
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
EFPFPF Y IQ+ FMK LY L+N+K GIFESPTGTGKS+S+ICG LKW D++
Sbjct: 6 EFPFPFSPYLIQNQFMKELYKCLENAKLGIFESPTGTGKSMSIICGALKWLLDYEEQQRN 65
Query: 84 KIEAEIKDL--EISKNETVSEDWIEQQS 109
++ I +L +I + S +W QS
Sbjct: 66 QLTTAISELDQQIKQYNNSSINWFFVQS 93
>gi|291224421|ref|XP_002732204.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like
[Saccoglossus kowalevskii]
Length = 853
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 61/90 (67%), Gaps = 4/90 (4%)
Query: 19 AEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
++VP FPFPF YDIQ +FM LY TLD SK GIFESPTGTGKSLSLICG LKW +D +
Sbjct: 5 SDVPESFPFPFPPYDIQKDFMSQLYQTLDQSKIGIFESPTGTGKSLSLICGALKWLNDFE 64
Query: 79 IAGLEKIEAEIKDLEISKNETVSEDWIEQQ 108
EK E++DL K +T S+ +Q
Sbjct: 65 ----EKQRQELEDLLQGKTKTTSDTRTSKQ 90
>gi|193608349|ref|XP_001949260.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Acyrthosiphon pisum]
Length = 890
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
E PS FPFPF Y IQ +FM +Y ++ K GIFESPTGTGK+LS+ICG ++W DH+
Sbjct: 17 ETPSTFPFPFTPYGIQHDFMTEIYSAIEGRKLGIFESPTGTGKTLSIICGAVRWLLDHEN 76
Query: 80 AGLEKIEAEIKDLEISKNET----VSEDWIEQQS 109
+++ ++ L + ET +DWI Q+
Sbjct: 77 REWNQLKLALESLTMKNGETNDDDDDDDWIAGQA 110
>gi|167527059|ref|XP_001747862.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773611|gb|EDQ87249.1| predicted protein [Monosiga brevicollis MX1]
Length = 812
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/74 (54%), Positives = 51/74 (68%), Gaps = 6/74 (8%)
Query: 5 TPNEDKEFKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSL 64
+PNE + +PLA P +F FPF+ Y IQ +FM LY T++ GIFESPTGTGKSL
Sbjct: 12 SPNE-----QPKPLA-TPVDFAFPFEPYSIQRDFMHRLYETIEQGGLGIFESPTGTGKSL 65
Query: 65 SLICGILKWYSDHK 78
SL+CG L+W DH+
Sbjct: 66 SLLCGALRWLRDHE 79
>gi|195132879|ref|XP_002010867.1| GI21782 [Drosophila mojavensis]
gi|193907655|gb|EDW06522.1| GI21782 [Drosophila mojavensis]
Length = 852
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 9/99 (9%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK----- 78
EF FP+ Y+IQ M+ L+ L++ + GIFESPTGTGKSL+L CG L W H+
Sbjct: 15 EFGFPYTPYEIQEQLMQQLFQVLEHKQIGIFESPTGTGKSLTLTCGALTWLRQHEQLVRT 74
Query: 79 --IAGLEKIEAEIKDLEISKNETVSEDWIEQQSFEPTIR 115
+ +++++A++K L+I + +EDWI QS T R
Sbjct: 75 ELLQRIDQVQAQLKQLQIESAQ--AEDWITAQSKTRTQR 111
>gi|410907467|ref|XP_003967213.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Takifugu rubripes]
Length = 979
Score = 84.3 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 41/54 (75%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
++FPFP+ YDIQ FM+ LY LD K GIFESPTGTGKSLSLICG L W +D
Sbjct: 95 TQFPFPYQPYDIQQQFMQALYSALDQGKVGIFESPTGTGKSLSLICGALSWLTD 148
>gi|110645341|gb|AAI18718.1| Unknown (protein for IMAGE:7692570) [Xenopus (Silurana) tropicalis]
Length = 115
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD-------H 77
FPFP++ Y IQ FM+ LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPYEPYPIQEQFMEKLYQALEAGKVGIFESPTGTGKSLSLICGALTWLQDFETKKRQE 72
Query: 78 KIAGLEKIEAEIKDLEISKNETVSEDWIEQ 107
+ L + E+K+ + S + T DWI Q
Sbjct: 73 EAQALSVADTELKEKDTSASST-EPDWIAQ 101
>gi|51258193|gb|AAH79952.1| DDX11 protein, partial [Xenopus (Silurana) tropicalis]
Length = 227
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD-------H 77
FPFP++ Y IQ FM+ LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 33 FPFPYEPYPIQEQFMEKLYQALEAGKVGIFESPTGTGKSLSLICGALTWLQDFETKKRQE 92
Query: 78 KIAGLEKIEAEIKDLEISKNETVSEDWIEQ 107
+ L + E+K+ + S + T DWI Q
Sbjct: 93 EAQALSVADTELKEKDTSASST-EPDWIAQ 121
>gi|196005263|ref|XP_002112498.1| hypothetical protein TRIADDRAFT_25417 [Trichoplax adhaerens]
gi|190584539|gb|EDV24608.1| hypothetical protein TRIADDRAFT_25417 [Trichoplax adhaerens]
Length = 899
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 51/84 (60%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
+F FPF YDIQ FM+ LY L + K GIFESPTGTGKSLSLICG + W +D
Sbjct: 16 DFDFPFQPYDIQVQFMRTLYTVLQDRKIGIFESPTGTGKSLSLICGAITWLNDFNRNIEG 75
Query: 84 KIEAEIKDLEISKNETVSEDWIEQ 107
+IE+ L+I + + WI +
Sbjct: 76 RIESRYLKLDIQLSVILELSWITE 99
>gi|348506178|ref|XP_003440637.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Oreochromis niloticus]
Length = 897
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 42/56 (75%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+EFPFP+ Y+IQ FM+ LY LD K GIFESPTGTGKSLSLICG L W D++
Sbjct: 6 AEFPFPYQPYNIQEEFMQALYSALDKGKVGIFESPTGTGKSLSLICGALSWLRDYE 61
>gi|194383052|dbj|BAG59082.1| unnamed protein product [Homo sapiens]
Length = 297
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|158301911|ref|XP_321585.4| AGAP001537-PA [Anopheles gambiae str. PEST]
gi|157012699|gb|EAA01808.4| AGAP001537-PA [Anopheles gambiae str. PEST]
Length = 910
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/109 (48%), Positives = 64/109 (58%), Gaps = 17/109 (15%)
Query: 12 FKEQRPL--AEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICG 69
FK ++ L E S+F FPF YDIQ +FMK LY + + GIFESPTGTGKSLSL CG
Sbjct: 4 FKPEKQLHPPEKGSDFAFPFLPYDIQLDFMKTLYTVIHSGGIGIFESPTGTGKSLSLTCG 63
Query: 70 ILKWYSDH----------KIAGLEKIEAEIKDLEISKNETVSEDWIEQQ 108
L W D+ KIA ++ AEI LE +NE+ S DWI Q
Sbjct: 64 TLTWLKDYVRLMETELQEKIA---RLRAEIARLE-KENES-SSDWISGQ 107
>gi|119608983|gb|EAW88577.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like
helicase homolog, S. cerevisiae), isoform CRA_b [Homo
sapiens]
Length = 288
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|282848158|ref|NP_001164296.1| DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Xenopus (Silurana)
tropicalis]
gi|197246717|gb|AAI68601.1| Unknown (protein for MGC:185780) [Xenopus (Silurana) tropicalis]
Length = 895
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD-------H 77
FPFP++ Y IQ FM+ LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPYEPYPIQEQFMEKLYQALEAGKVGIFESPTGTGKSLSLICGALTWLQDFETKKRQE 72
Query: 78 KIAGLEKIEAEIKDLEISKNETVSEDWIEQ 107
+ L + E+K+ + S + T DWI Q
Sbjct: 73 EAQALSVADTELKEKDTSASST-EPDWIAQ 101
>gi|1666895|gb|AAB18750.1| CHL1 protein [Homo sapiens]
gi|119571190|gb|EAW50805.1| hCG1993153, isoform CRA_a [Homo sapiens]
Length = 288
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|384500829|gb|EIE91320.1| hypothetical protein RO3G_16031 [Rhizopus delemar RA 99-880]
Length = 336
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 45/69 (65%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
F FPF+ Y IQ +FM NLY L K GIFESPTGTGKSLSLICG LKW D ++ +
Sbjct: 8 FGFPFEPYPIQKDFMSNLYNALSQEKIGIFESPTGTGKSLSLICGSLKWLQDQEVKTTKI 67
Query: 85 IEAEIKDLE 93
E KD E
Sbjct: 68 QSVESKDNE 76
>gi|119571192|gb|EAW50807.1| hCG1993153, isoform CRA_c [Homo sapiens]
gi|119571195|gb|EAW50810.1| hCG1993153, isoform CRA_c [Homo sapiens]
Length = 314
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|194387252|dbj|BAG59990.1| unnamed protein product [Homo sapiens]
Length = 304
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|312375220|gb|EFR22635.1| hypothetical protein AND_14424 [Anopheles darlingi]
Length = 894
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
EF FPF Y+IQ +FMK+LY L + GIFESPTGTGKSLSL CG L W D + E
Sbjct: 18 EFAFPFPPYEIQLDFMKSLYGVLQSGGIGIFESPTGTGKSLSLTCGSLTWLKDFERLLEE 77
Query: 84 KIEAEIKDLE-----ISKNETVSEDWIEQQ 108
++ ++I L + K V+ DWI Q
Sbjct: 78 ELGSKIVQLRTEIAALEKKNEVASDWITGQ 107
>gi|452981101|gb|EME80861.1| hypothetical protein MYCFIDRAFT_20311, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 788
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 6/94 (6%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAG 81
P +F PF YDIQ FM+ +Y +++ + GIFESPTGTGKSLSLICG L W +HK
Sbjct: 1 PKDFHHPFQPYDIQQQFMEAVYDCIEHKQVGIFESPTGTGKSLSLICGALTWLREHKRKT 60
Query: 82 LEKIEAEIKDLEISKNETVSEDWIEQQSFEPTIR 115
++ A + E+ +E DW+ Q + E R
Sbjct: 61 FDEALATV---EVDDDEP---DWMTQHAREARSR 88
>gi|194381748|dbj|BAG64243.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|119608984|gb|EAW88578.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like
helicase homolog, S. cerevisiae), isoform CRA_c [Homo
sapiens]
Length = 295
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|345492904|ref|XP_001602139.2| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Nasonia vitripennis]
Length = 869
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 11/97 (11%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH-- 77
E PS+FPFPF Y IQ++FMKNLY L+N GIFESPTGTGK+LS+ICG LKW D+
Sbjct: 2 ETPSDFPFPFPPYSIQADFMKNLYMCLENGNLGIFESPTGTGKTLSIICGALKWLIDNEA 61
Query: 78 --KIAGLEK---IEAEIKDLEISKNETVSEDWIEQQS 109
K LEK ++A+IK++E +KN DW Q+
Sbjct: 62 RQKSRLLEKQAELDAKIKEIE-AKN---VNDWFSVQT 94
>gi|307186827|gb|EFN72247.1| Probable ATP-dependent RNA helicase DDX12 [Camponotus floridanus]
Length = 861
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 12/86 (13%)
Query: 31 AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK-------IAGLE 83
AY IQ FMK LY L+N K G+FESPTGTGKSLSLICG LKW DH+ I+ +
Sbjct: 13 AYQIQKQFMKELYNCLENGKLGLFESPTGTGKSLSLICGALKWLIDHEKWKKQELISIIT 72
Query: 84 KIEAEIKDLEISKNETVSEDWIEQQS 109
+I+ +IK+ E S S+DW Q+
Sbjct: 73 EIDNKIKNYEKS-----SDDWFTVQT 93
>gi|119571196|gb|EAW50811.1| hCG1993153, isoform CRA_f [Homo sapiens]
Length = 269
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|296211273|ref|XP_002752340.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Callithrix jacchus]
Length = 903
Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/69 (59%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY LD K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQKDFMAELYRVLDAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|170029991|ref|XP_001842874.1| fanconi anemia group J protein [Culex quinquefasciatus]
gi|167865334|gb|EDS28717.1| fanconi anemia group J protein [Culex quinquefasciatus]
Length = 873
Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 9/96 (9%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK- 78
E S+F FPF YDIQ + M++LY ++ + GIFESPTGTGKSL+L CG+L W DH+
Sbjct: 13 ESGSQFSFPFPPYDIQLDLMRSLYTVVERGQVGIFESPTGTGKSLTLTCGVLSWLRDHEA 72
Query: 79 ------IAGLEKIEAEIKDLEISKNETVSEDWIEQQ 108
+E + EI LE + + DWI Q
Sbjct: 73 LVERELTERIEALRGEIGRLE--RETAGAVDWISGQ 106
>gi|410963605|ref|XP_003988355.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8 [Felis catus]
Length = 907
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/52 (69%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFPF Y IQ +FM LY LD K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQKDFMAELYRVLDAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|348564904|ref|XP_003468244.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Cavia porcellus]
Length = 908
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/53 (66%), Positives = 39/53 (73%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
+FPFPF Y IQ +FM LY+ L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 12 DFPFPFPPYSIQKDFMAKLYHVLEAGKIGIFESPTGTGKSLSLICGALTWLRD 64
>gi|299116766|emb|CBN74879.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1076
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/93 (45%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 1 MASKTPNEDKEFKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
M+S NE + E P E + PFPF+ YD+Q M+ +Y TL+N GIFESPTGT
Sbjct: 1 MSSGGDNEMRGRDEGPPREE--PDIPFPFEPYDVQKQLMRKIYSTLENGGIGIFESPTGT 58
Query: 61 GKSLSLICGILKWYSDHKIAGLEKIEAEIKDLE 93
GKSLS+IC L+W D AE KD++
Sbjct: 59 GKSLSVICSALQWLKD----------AEAKDVD 81
>gi|126340221|ref|XP_001373024.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
[Monodelphis domestica]
Length = 902
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFP+ Y IQ +FM LY+ L+ K GIFESPTGTGKSLSLICG L W D + ++
Sbjct: 12 FPFPYTPYSIQKDFMTELYHVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKQQE 71
Query: 85 IEAEIKDLEISKNETVSE 102
EA + DL I+ + E
Sbjct: 72 -EARLLDLGIAPPNHLEE 88
>gi|60811280|gb|AAX36168.1| DEAD/H box polypeptide 11 [synthetic construct]
Length = 971
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|29792240|gb|AAH50522.1| DDX11 protein [Homo sapiens]
Length = 970
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|132566527|ref|NP_689651.1| probable ATP-dependent RNA helicase DDX11 isoform 3 [Homo
sapiens]
gi|380420356|ref|NP_001244073.1| probable ATP-dependent RNA helicase DDX11 isoform 3 [Homo
sapiens]
gi|74731686|sp|Q96FC9.1|DDX11_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX11; AltName:
Full=CHL1-related protein 1; Short=hCHLR1; AltName:
Full=DEAD/H box protein 11; AltName: Full=Keratinocyte
growth factor-regulated gene 2 protein; Short=KRG-2
Length = 970
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|441670170|ref|XP_004092177.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 [Nomascus
leucogenys]
Length = 970
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|100913202|ref|NP_085911.2| probable ATP-dependent RNA helicase DDX11 isoform 1 [Homo
sapiens]
Length = 906
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|55925522|ref|NP_001007320.1| probable ATP-dependent RNA helicase DDX11 [Danio rerio]
gi|55250690|gb|AAH85645.1| Zgc:92172 [Danio rerio]
Length = 890
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 40/54 (74%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
FPFPF Y IQ +FM+ LY LD K GIFESPTGTGKSLSLICG L W D++
Sbjct: 8 FPFPFQPYPIQESFMEALYTALDQRKVGIFESPTGTGKSLSLICGALTWLRDYE 61
>gi|1517816|gb|AAB06962.1| helicase [Homo sapiens]
Length = 906
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|1666893|gb|AAB18749.1| CHL1 potential helicase [Homo sapiens]
Length = 906
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|84627555|gb|AAI11734.1| DDX11 protein [Homo sapiens]
Length = 906
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|332839867|ref|XP_003313867.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 3 [Pan
troglodytes]
Length = 972
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAEIKDLEISKNETV 100
IE L K+E++
Sbjct: 73 EARLIETGTGSLHDEKDESL 92
>gi|194912339|ref|XP_001982483.1| GG12711 [Drosophila erecta]
gi|190648159|gb|EDV45452.1| GG12711 [Drosophila erecta]
Length = 859
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 1 MASKTPNEDKEFKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
MA TP +QR EF FP+ Y IQ M+ L+ L+N + GIFESPTGT
Sbjct: 1 MAQYTP-------DQRLDTPTAQEFGFPYPPYAIQEQLMQELFRVLENGQVGIFESPTGT 53
Query: 61 GKSLSLICGILKWYSDHK-------IAGLEKIEAEIKDLEISKNETVSEDWIEQQ 108
GKSL+L CG L W + H+ +A + +E E+ L+ + S DW+E Q
Sbjct: 54 GKSLTLTCGALTWLARHEELVHTEMLARIRGVEQELAKLKEESEQ--SSDWLESQ 106
>gi|410348526|gb|JAA40867.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 972
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAEIKDLEISKNETV 100
IE L K+E++
Sbjct: 73 EARLIETGTGSLHDEKDESL 92
>gi|332232617|ref|XP_003265500.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 1
[Nomascus leucogenys]
Length = 906
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|410212712|gb|JAA03575.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAEIKDLEISKNETV 100
IE L K+E++
Sbjct: 73 EARLIETGTGSLHDEKDESL 92
>gi|406865719|gb|EKD18760.1| putative ATP-dependent RNA helicase chl1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 894
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
+F PF Y IQ FM+ +Y L+N K GI ESPTGTGKSLSLICG L W DHK G E
Sbjct: 17 DFHHPFTPYTIQETFMETVYQVLENGKVGILESPTGTGKSLSLICGALTWLRDHK--GRE 74
Query: 84 KIEAEIKDLEISKNETVSEDWIEQQS 109
E L +N++ +WI +Q+
Sbjct: 75 FQEG----LNWGQNDSDEPEWIIEQA 96
>gi|410348520|gb|JAA40864.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410348522|gb|JAA40865.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410348524|gb|JAA40866.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAEIKDLEISKNETV 100
IE L K+E++
Sbjct: 73 EARLIETGTGSLHDEKDESL 92
>gi|332839861|ref|XP_003313865.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 1 [Pan
troglodytes]
gi|410258634|gb|JAA17284.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410301530|gb|JAA29365.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAEIKDLEISKNETV 100
IE L K+E++
Sbjct: 73 EARLIETGTGSLHDEKDESL 92
>gi|205716435|sp|A8MPP1.1|D11L8_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DDX11-like
protein 8; AltName: Full=DEAD/H box protein 11-like 8
Length = 907
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|308497656|ref|XP_003111015.1| hypothetical protein CRE_04799 [Caenorhabditis remanei]
gi|308242895|gb|EFO86847.1| hypothetical protein CRE_04799 [Caenorhabditis remanei]
Length = 850
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 10/87 (11%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
EF FPF YDIQ+ M+ + +++ K GIFESPTGTGKSLS++C L W + +
Sbjct: 3 EFSFPFQPYDIQNRLMREIRSCIEHGKVGIFESPTGTGKSLSVLCATLTWLENED----K 58
Query: 84 KIEAEIK------DLEISKNETVSEDW 104
+IEAE++ LE++K+E +E+W
Sbjct: 59 QIEAELESKLKTVQLELNKSEKTTENW 85
>gi|297261772|ref|XP_001114510.2| PREDICTED: putative ATP-dependent RNA helicase DDX11-like
protein-like isoform 4 [Macaca mulatta]
Length = 910
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 17 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 73
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 74 REEEARLLE 82
>gi|390350219|ref|XP_003727367.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like, partial [Strongylocentrotus purpuratus]
Length = 161
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 55/77 (71%)
Query: 11 EFKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGI 70
+ +E++ E P +FPFPF Y IQ +FMK+LY LD K GIFESPTGTGKSLSLICG
Sbjct: 13 DMEEKQDEGEGPVKFPFPFPPYPIQEDFMKHLYEALDGGKIGIFESPTGTGKSLSLICGA 72
Query: 71 LKWYSDHKIAGLEKIEA 87
LKW +DH+ ++EA
Sbjct: 73 LKWLTDHEKQKQMELEA 89
>gi|361125732|gb|EHK97761.1| putative ATP-dependent RNA helicase CHL1 [Glarea lozoyensis 74030]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 14 EQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E+ AE+ +F P+ YDIQ FM +Y L+ K GI ESPTGTGKSLSLICG L W
Sbjct: 9 EKDGAAEISRDFHHPYTPYDIQETFMNTVYEVLEGGKVGILESPTGTGKSLSLICGSLTW 68
Query: 74 YSDHKIAGLEKIEAEIKDLEISKNETVSEDWIEQQS 109
D+K E L +N++ +W+ +Q+
Sbjct: 69 LRDYKRNTFE------GGLNWGQNDSNEPEWVIEQT 98
>gi|383410919|gb|AFH28673.1| putative ATP-dependent RNA helicase DDX11 isoform 1 [Macaca
mulatta]
Length = 906
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|403309188|ref|XP_003945007.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Saimiri boliviensis boliviensis]
Length = 903
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQKDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|355785871|gb|EHH66054.1| hypothetical protein EGM_02957 [Macaca fascicularis]
Length = 906
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|355563978|gb|EHH20478.1| hypothetical protein EGK_03343 [Macaca mulatta]
Length = 906
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 HEEEARLLE 78
>gi|100913204|ref|NP_004390.3| probable ATP-dependent RNA helicase DDX11 isoform 2 [Homo
sapiens]
Length = 856
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|241623166|ref|XP_002407530.1| conserved hypothetical protein [Ixodes scapularis]
gi|215501005|gb|EEC10499.1| conserved hypothetical protein [Ixodes scapularis]
Length = 348
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
F FPF+ Y +Q FMK LY L++ K GIFESPTGTGKSLS+IC L W +
Sbjct: 9 FNFPFEPYLVQLTFMKTLYKALEDGKVGIFESPTGTGKSLSIICASLAWLKEFNSRNKAS 68
Query: 85 IEAEIKDL--EISKNETVSEDWIEQQS 109
+E+E+ +L +IS DWI + +
Sbjct: 69 LESEVTELTRQISLPADAESDWITRDA 95
>gi|332232619|ref|XP_003265501.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 2
[Nomascus leucogenys]
Length = 856
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|195049542|ref|XP_001992741.1| GH24926 [Drosophila grimshawi]
gi|193893582|gb|EDV92448.1| GH24926 [Drosophila grimshawi]
Length = 843
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 12/100 (12%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
P AE +F FP+ Y IQ M+ L+ L++ + GIFESPTGTGKSL+L CG L W
Sbjct: 11 PAAE---DFGFPYTPYTIQEQLMQQLFLVLESKQIGIFESPTGTGKSLTLTCGALTWLRQ 67
Query: 77 HK-------IAGLEKIEAEIKDLEISKNETVSEDWIEQQS 109
H+ + + ++EA+++ L+ + + + DWI QS
Sbjct: 68 HEQLVRSELVQRIGQVEAQLRQLQDAGEQ--ASDWITAQS 105
>gi|345317478|ref|XP_001517598.2| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
[Ornithorhynchus anatinus]
Length = 899
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/73 (54%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYPIQESFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFET---KK 69
Query: 85 IEAEIKDLEISKN 97
+ E + LE N
Sbjct: 70 KQEEARLLEAGNN 82
>gi|351702333|gb|EHB05252.1| Putative ATP-dependent RNA helicase DDX11-like protein
[Heterocephalus glaber]
Length = 953
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 30 FPFPFPPYSIQKDFMAELYQVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 81
>gi|281349618|gb|EFB25202.1| hypothetical protein PANDA_002012 [Ailuropoda melanoleuca]
Length = 897
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQKDFMAELYQVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|301756631|ref|XP_002914172.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like
protein-like [Ailuropoda melanoleuca]
Length = 908
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQKDFMAELYQVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|195397135|ref|XP_002057184.1| GJ16955 [Drosophila virilis]
gi|194146951|gb|EDW62670.1| GJ16955 [Drosophila virilis]
Length = 799
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 9/98 (9%)
Query: 19 AEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
A +F FP+ Y IQ M+ L+ L+ + GIFESPTGTGKSL+L CG L W H+
Sbjct: 10 APAAQDFGFPYTPYAIQEQLMQQLFLVLERKQIGIFESPTGTGKSLTLTCGALTWLRQHE 69
Query: 79 -------IAGLEKIEAEIKDLEISKNETVSEDWIEQQS 109
+ + ++EAE+ L+ + + +EDWI QS
Sbjct: 70 QLVRAELLQRIGEVEAELCRLQAASAQ--AEDWITAQS 105
>gi|332839863|ref|XP_003313866.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 2 [Pan
troglodytes]
Length = 856
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + E+
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREE 72
Query: 85 ----IEAEIKDLEISKNETV 100
IE L K+E++
Sbjct: 73 EARLIETGTGSLHDEKDESL 92
>gi|169625336|ref|XP_001806072.1| hypothetical protein SNOG_15940 [Phaeosphaeria nodorum SN15]
gi|160705637|gb|EAT76778.2| hypothetical protein SNOG_15940 [Phaeosphaeria nodorum SN15]
Length = 1396
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/54 (64%), Positives = 40/54 (74%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
F P++ YDIQ++FM +Y LD K GIFESPTGTGKSLSLICG L W DHK
Sbjct: 10 FHHPYEPYDIQNDFMNAVYDCLDAGKVGIFESPTGTGKSLSLICGSLTWLRDHK 63
>gi|303310525|ref|XP_003065274.1| DNA repair helicase family protein [Coccidioides posadasii C735
delta SOWgp]
gi|240104936|gb|EER23129.1| DNA repair helicase family protein [Coccidioides posadasii C735
delta SOWgp]
Length = 864
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
F P+ YDIQ FM++LY ++ K GIFESPTGTGKSLSLICG L W DHK
Sbjct: 8 FYHPYSPYDIQVQFMRSLYTCIEECKVGIFESPTGTGKSLSLICGSLTWLRDHK 61
>gi|149712588|ref|XP_001490646.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Equus
caballus]
Length = 906
Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQKDFMAELYQVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|119195411|ref|XP_001248309.1| hypothetical protein CIMG_02080 [Coccidioides immitis RS]
gi|121932141|sp|Q1E5T3.1|CHL1_COCIM RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
Length = 861
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
F P+ YDIQ FM++LY ++ K GIFESPTGTGKSLSLICG L W DHK
Sbjct: 8 FYHPYSPYDIQVQFMRSLYTCIEECKVGIFESPTGTGKSLSLICGSLTWLRDHK 61
>gi|119571193|gb|EAW50808.1| hCG1993153, isoform CRA_d [Homo sapiens]
Length = 457
Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|431892148|gb|ELK02595.1| Putative ATP-dependent RNA helicase DDX11-like protein [Pteropus
alecto]
Length = 857
Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/87 (52%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 26 FPFPFTPYSIQKDFMAELYQVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---KKK 82
Query: 85 IEAEIKDLEISKNETVS-EDWIEQQSF 110
+ E + LE ETV D Q SF
Sbjct: 83 RQEEARVLE---TETVPLSDGKHQPSF 106
>gi|327272138|ref|XP_003220843.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Anolis carolinensis]
Length = 914
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 36/52 (69%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFP+ Y IQ FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPYAPYPIQEEFMAKLYQVLETGKIGIFESPTGTGKSLSLICGALTWLRD 64
>gi|301117338|ref|XP_002906397.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
gi|262107746|gb|EEY65798.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
Length = 819
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
F FP+D Y IQ M+ ++ TL+ GIFESPTGTGKS+SLICG L W + H L
Sbjct: 6 FSFPYDPYSIQLELMRQIWATLEQGHCGIFESPTGTGKSISLICGALTWLTKHTDDWLSD 65
Query: 85 IEAEIKDLEISKNETVSED---WIEQQSFEP 112
E + D E+ + +++D IE+ EP
Sbjct: 66 FEQKSADRELKYRQQMAKDALTGIERLRLEP 96
>gi|119608988|gb|EAW88582.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like
helicase homolog, S. cerevisiae), isoform CRA_g [Homo
sapiens]
gi|119608989|gb|EAW88583.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like
helicase homolog, S. cerevisiae), isoform CRA_h [Homo
sapiens]
Length = 683
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>gi|395836775|ref|XP_003791325.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Otolemur garnettii]
Length = 880
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYSIQKDFMAQLYQVLEAGKIGIFESPTGTGKSLSLICGSLSWLRD 64
>gi|194768579|ref|XP_001966389.1| GF22147 [Drosophila ananassae]
gi|190617153|gb|EDV32677.1| GF22147 [Drosophila ananassae]
Length = 875
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
+F FP++ Y+IQ M+ L+ L+N + GIFESPTGTGKSL+L CG L W + H+ E
Sbjct: 17 QFGFPYEPYEIQKKLMQELFQILENGEVGIFESPTGTGKSLTLTCGALTWLARHEKLVKE 76
Query: 84 KIEAEIKDLE-----ISKNETVSEDWIEQQS 109
+++ + +E + K+ ++DW++ Q
Sbjct: 77 ELQERVDMMEKLVKRLKKDGQEAKDWLDVQG 107
>gi|195469691|ref|XP_002099770.1| GE16539 [Drosophila yakuba]
gi|194187294|gb|EDX00878.1| GE16539 [Drosophila yakuba]
Length = 859
Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 46/116 (39%), Positives = 63/116 (54%), Gaps = 18/116 (15%)
Query: 1 MASKTPNEDKEFKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
MA TP+ QR EF FP+ Y IQ M+ L+ L+ + GIFESPTGT
Sbjct: 1 MAQYTPS-------QRLTTPSAQEFGFPYPPYTIQEQLMQELFQVLERGQVGIFESPTGT 53
Query: 61 GKSLSLICGILKWYSDHK-------IAGLEKIEAEIKDLEISKNETV-SEDWIEQQ 108
GKSL+L CG L W + H+ +A + ++E E+ L K+E+ S DW+E Q
Sbjct: 54 GKSLTLTCGALTWLARHEELVRTEMLARIRRVEQELAKL---KDESEHSSDWLESQ 106
>gi|449482368|ref|XP_002193292.2| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Taeniopygia guttata]
Length = 913
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
+P FPFP+ Y IQ FM+ LY L+ + GIFESPTGTGKSLSLICG L W D
Sbjct: 1 MPGRFPFPYTPYRIQEQFMEALYGALEAGRVGIFESPTGTGKSLSLICGALSWLRD 56
>gi|344278065|ref|XP_003410817.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Loxodonta africana]
Length = 904
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 34/53 (64%), Positives = 38/53 (71%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
+FPFP+ Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 12 KFPFPYTPYSIQKDFMTELYKVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|426227064|ref|XP_004007648.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent RNA
helicase DDX11-like protein 8-like [Ovis aries]
Length = 884
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/52 (67%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 13 FPFPFTPYAIQKDFMAALYQVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 64
>gi|452002470|gb|EMD94928.1| hypothetical protein COCHEDRAFT_1168302 [Cochliobolus
heterostrophus C5]
Length = 1449
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
+F P+ YDIQ+ FM +Y L+N + GIFESPTGTGKSLSLICG L W DHK E
Sbjct: 9 DFHHPYTPYDIQNEFMGAVYECLENGQVGIFESPTGTGKSLSLICGSLTWLRDHKRKTFE 68
Query: 84 K 84
+
Sbjct: 69 E 69
>gi|242814468|ref|XP_002486375.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
gi|218714714|gb|EED14137.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
Length = 860
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 39/58 (67%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+ +F P+ YDIQ FM LY ++ K GIFESPTGTGKSLSLICG L W DHK
Sbjct: 1 MAHQFHHPYTPYDIQLEFMSALYDCIEAGKVGIFESPTGTGKSLSLICGALTWLRDHK 58
>gi|345792101|ref|XP_543872.3| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Canis
lupus familiaris]
Length = 905
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 34/52 (65%), Positives = 37/52 (71%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLS+ICG L W D
Sbjct: 13 FPFPFTPYSIQKDFMAELYRVLEAGKIGIFESPTGTGKSLSVICGALSWLRD 64
>gi|378731863|gb|EHY58322.1| chromosome transmission fidelity protein 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 839
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/86 (47%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
+ F P+ YDIQ FM LY ++ K GIFESPTGTGKSLSLICG L W DH+ L
Sbjct: 6 ANFCHPYQPYDIQLEFMTQLYRCIEGKKVGIFESPTGTGKSLSLICGALTWLRDHERRAL 65
Query: 83 EK-IEAEIKDLEISKNETVSEDWIEQ 107
+ ++AE KD + +DW+ Q
Sbjct: 66 DSTLKAENKDAQ--------DDWLLQ 83
>gi|119493390|ref|XP_001263885.1| DEAD_2 domain protein [Neosartorya fischeri NRRL 181]
gi|206558089|sp|A1D8E4.1|CHL1_NEOFI RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|119412045|gb|EAW21988.1| DEAD_2 domain protein [Neosartorya fischeri NRRL 181]
Length = 861
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 41/66 (62%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
+ P F P+ YDIQ FM+ LY L+ K +FESPTGTGKSLSLICG + W +H
Sbjct: 1 MGSQPQNFNHPYSPYDIQLQFMRALYTCLEEGKVAVFESPTGTGKSLSLICGSMTWLREH 60
Query: 78 KIAGLE 83
K L+
Sbjct: 61 KRKALQ 66
>gi|157123196|ref|XP_001660054.1| regulator of telomere elongation helicase 1 rtel1 [Aedes aegypti]
gi|108874458|gb|EAT38683.1| AAEL009438-PA [Aedes aegypti]
Length = 873
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 57/92 (61%), Gaps = 10/92 (10%)
Query: 25 FPFPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH-KIAG- 81
F FPF Y IQ + M++LY T++N + GIFESPTGTGKSL+L CG+L W D+ ++ G
Sbjct: 17 FQFPFATPYSIQLDLMRSLYSTVENRQVGIFESPTGTGKSLTLTCGVLSWLRDYEEVVGR 76
Query: 82 --LEKIE---AEIKDLEISKNETVSEDWIEQQ 108
+EKIE E+ LE V DWI Q
Sbjct: 77 ELVEKIEWLKGEVVRLERETAGAV--DWISGQ 106
>gi|18543219|ref|NP_569898.1| CG11403 [Drosophila melanogaster]
gi|6018910|emb|CAB58099.1| EG:33C11.2 [Drosophila melanogaster]
gi|7290134|gb|AAF45598.1| CG11403 [Drosophila melanogaster]
gi|16197995|gb|AAL13769.1| LD24267p [Drosophila melanogaster]
gi|220945784|gb|ACL85435.1| CG11403-PA [synthetic construct]
gi|220955538|gb|ACL90312.1| CG11403-PA [synthetic construct]
Length = 861
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 1 MASKTPNEDKEFKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
M+ TPN QR EF FP+ Y+IQ M+ L+ L+ + GIFESPTGT
Sbjct: 1 MSQYTPN-------QRLDTPGAQEFGFPYSPYEIQEQLMQELFQVLERGQVGIFESPTGT 53
Query: 61 GKSLSLICGILKWYSDHK-------IAGLEKIEAEIKDLEISKNETVSEDWIEQQ 108
GKSL+L CG L W + H+ +A + +E E+ L+ + S +W+E Q
Sbjct: 54 GKSLTLTCGALTWLARHEELVRTEMLARIRGVEQELAKLKEESEQ--SSNWLESQ 106
>gi|403159247|ref|XP_003319882.2| hypothetical protein PGTG_00794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168014|gb|EFP75463.2| hypothetical protein PGTG_00794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 826
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 11/99 (11%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYS-DHKIA 80
P +F FPF+ Y+IQ FM+ L+ +++ K GIFESPTGTGKSLSLIC L W D + A
Sbjct: 16 PEQFSFPFEPYEIQRRFMRVLFEVIEHQKVGIFESPTGTGKSLSLICAALTWLELDRRRA 75
Query: 81 ---GLEKIEAEIKDLEISKNETVSE-DWIEQQSFEPTIR 115
LE++ A++K E+ E DWI +Q E R
Sbjct: 76 TEGTLEQLFAKLKA------ESPQEPDWILEQHVERKRR 108
>gi|395538820|ref|XP_003771372.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Sarcophilus harrisii]
Length = 901
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFP+ Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + ++
Sbjct: 12 FPFPYTPYSIQKDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKQQE 71
Query: 85 IEAEIKDLEISKNETVSE 102
EA + D I+ + + E
Sbjct: 72 -EAHLLDTGIAPPDFLEE 88
>gi|317151049|ref|XP_001824411.2| ATP-dependent RNA helicase CHL1 [Aspergillus oryzae RIB40]
Length = 858
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 38/55 (69%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
EF P+ YDIQ FM+ LY ++ K +FESPTGTGKSLS+ICG L W DHK
Sbjct: 7 EFHHPYSPYDIQLQFMRALYSCIEKGKVAVFESPTGTGKSLSIICGSLTWLRDHK 61
>gi|451852903|gb|EMD66197.1| hypothetical protein COCSADRAFT_137550 [Cochliobolus sativus
ND90Pr]
Length = 860
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
+F P+ YDIQ+ FM +Y L+N + GIFESPTGTGKSLSLICG L W DHK E
Sbjct: 9 DFHHPYTPYDIQNEFMSAVYECLENGQVGIFESPTGTGKSLSLICGSLTWLRDHKRRTFE 68
Query: 84 K 84
+
Sbjct: 69 E 69
>gi|396466748|ref|XP_003837763.1| similar to ATP-dependent RNA helicase chl1 [Leptosphaeria
maculans JN3]
gi|312214326|emb|CBX94319.1| similar to ATP-dependent RNA helicase chl1 [Leptosphaeria
maculans JN3]
Length = 861
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 43/61 (70%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
EF P+ Y+IQ++FM +Y L++ K GIFESPTGTGKSLSLICG L W DHK E
Sbjct: 9 EFHHPYTPYEIQNDFMHAVYNCLESGKVGIFESPTGTGKSLSLICGSLTWLRDHKRRTFE 68
Query: 84 K 84
+
Sbjct: 69 E 69
>gi|449542207|gb|EMD33187.1| hypothetical protein CERSUDRAFT_108361 [Ceriporiopsis subvermispora
B]
Length = 954
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Query: 22 PSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
PS FP FPF YDIQ + MK+LY ++++ K I ESPTGTGK+LSL+CG L W D
Sbjct: 9 PSSFPAFPFVPYDIQLSLMKHLYSSIEDRKVAIVESPTGTGKTLSLLCGSLTWLLD---- 64
Query: 81 GLEKIEAEIKDLEISKNETVSEDWIEQQSF 110
E+ A ++ E+ DW+ Q+
Sbjct: 65 --EQARARKGEINAITGESGDPDWVLAQTL 92
>gi|125983388|ref|XP_001355459.1| GA10980 [Drosophila pseudoobscura pseudoobscura]
gi|54643775|gb|EAL32518.1| GA10980 [Drosophila pseudoobscura pseudoobscura]
Length = 861
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/92 (44%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH----K 78
S+F FPF Y IQ M+ L+ L+ + GIFESPTGTGKSL+L CG L W H +
Sbjct: 16 SDFGFPFAPYAIQEQLMQELFSVLERRQVGIFESPTGTGKSLTLTCGALTWLRQHEELVR 75
Query: 79 IAGLEKI-EAEIKDLEISKNETVSEDWIEQQS 109
L++I E E K + EDWI QS
Sbjct: 76 SELLQRIVEVEKKLDRLQAASAQEEDWISAQS 107
>gi|195162259|ref|XP_002021973.1| GL14395 [Drosophila persimilis]
gi|194103871|gb|EDW25914.1| GL14395 [Drosophila persimilis]
Length = 861
Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/92 (44%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH----K 78
S+F FPF Y IQ M+ L+ L+ + GIFESPTGTGKSL+L CG L W H +
Sbjct: 16 SDFGFPFAPYAIQEQLMQELFSVLERRQVGIFESPTGTGKSLTLTCGALTWLRQHEELVR 75
Query: 79 IAGLEKI-EAEIKDLEISKNETVSEDWIEQQS 109
L++I E E K + EDWI QS
Sbjct: 76 SELLQRIVEVEKKLDRLQAASAQEEDWISAQS 107
>gi|206558115|sp|A2QY22.1|CHL1_ASPNC RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|134079766|emb|CAK40902.1| unnamed protein product [Aspergillus niger]
Length = 874
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
++F P+ YDIQ M+ LY L+ K +FESPTGTGKSLSLICG L W DHK +
Sbjct: 6 NDFHHPYSPYDIQLQLMRALYSCLEQGKVAVFESPTGTGKSLSLICGSLTWLRDHKRSAF 65
Query: 83 E 83
+
Sbjct: 66 Q 66
>gi|317032533|ref|XP_001395061.2| ATP-dependent RNA helicase CHL1 [Aspergillus niger CBS 513.88]
Length = 834
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
++F P+ YDIQ M+ LY L+ K +FESPTGTGKSLSLICG L W DHK +
Sbjct: 6 NDFHHPYSPYDIQLQLMRALYSCLEQGKVAVFESPTGTGKSLSLICGSLTWLRDHKRSAF 65
Query: 83 E 83
+
Sbjct: 66 Q 66
>gi|330930952|ref|XP_003303208.1| hypothetical protein PTT_15338 [Pyrenophora teres f. teres 0-1]
gi|311320914|gb|EFQ88691.1| hypothetical protein PTT_15338 [Pyrenophora teres f. teres 0-1]
Length = 865
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 42/59 (71%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
++ +F P+ YDIQ+ FM +Y L++ K GIFESPTGTGKSLSLICG L W DHK
Sbjct: 5 KLQQDFHHPYTPYDIQNEFMGAVYKCLEDRKVGIFESPTGTGKSLSLICGSLTWLRDHK 63
>gi|189211309|ref|XP_001941985.1| TFIIH basal transcription factor complex helicase subunit
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187978078|gb|EDU44704.1| TFIIH basal transcription factor complex helicase subunit
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 850
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
+F P+ YDIQ+ FM +Y L++ K GIFESPTGTGKSLSLICG L W DHK E
Sbjct: 9 DFHHPYTPYDIQNEFMGAVYKCLEDGKVGIFESPTGTGKSLSLICGSLTWLRDHKRRTFE 68
Query: 84 K 84
+
Sbjct: 69 E 69
>gi|398396280|ref|XP_003851598.1| hypothetical protein MYCGRDRAFT_86617 [Zymoseptoria tritici
IPO323]
gi|339471478|gb|EGP86574.1| hypothetical protein MYCGRDRAFT_86617 [Zymoseptoria tritici
IPO323]
Length = 825
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+F PF YDIQ FM+ +Y ++ SK GIFESPTGTGKSLSLICG L W ++K
Sbjct: 5 DFHHPFTPYDIQQQFMEAVYKCIEESKVGIFESPTGTGKSLSLICGALTWLRENK 59
>gi|195564575|ref|XP_002105891.1| GD16432 [Drosophila simulans]
gi|194203255|gb|EDX16831.1| GD16432 [Drosophila simulans]
Length = 379
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 1 MASKTPNEDKEFKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
MA TPN QR EF FP+ Y+IQ M+ L+ L+ + GIFESPTGT
Sbjct: 1 MAQYTPN-------QRLATPAAQEFGFPYSPYEIQEQLMQELFEVLERGQVGIFESPTGT 53
Query: 61 GKSLSLICGILKWYSDHKIAGLEKIEAEIKDL-----EISKNETVSEDWIEQQ 108
GKSL+L CG L W + H+ ++ A I+ + E+ + S DW+E Q
Sbjct: 54 GKSLTLTCGALTWLARHEELVRTEMLARIRGVEQELTELEEESEKSSDWLESQ 106
>gi|449300032|gb|EMC96045.1| hypothetical protein BAUCODRAFT_514453 [Baudoinia compniacensis
UAMH 10762]
Length = 831
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 44/68 (64%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAG 81
P +F PF YDIQ FM+ +Y +++ K GIFESPTGTGKSLSLIC L W ++K
Sbjct: 3 PKDFHHPFQPYDIQQQFMEAMYDCIEDGKVGIFESPTGTGKSLSLICASLTWLREYKRKA 62
Query: 82 LEKIEAEI 89
++ A I
Sbjct: 63 FDEALATI 70
>gi|363728123|ref|XP_416375.3| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Gallus
gallus]
Length = 941
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 37/54 (68%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
+ FPFP+ Y IQ FM LY L+ + GIFESPTGTGKSLSLICG L W D
Sbjct: 48 ASFPFPYTPYRIQEQFMAALYAALEAGRIGIFESPTGTGKSLSLICGALSWLQD 101
>gi|348688344|gb|EGZ28158.1| hypothetical protein PHYSODRAFT_470654 [Phytophthora sojae]
Length = 826
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
F FP++ Y IQ + M+ ++ TL+ GIFESPTGTGKS+SLICG L W + H L
Sbjct: 6 FSFPYEPYSIQLDLMRQIWETLERGHCGIFESPTGTGKSISLICGALTWLTKHTDDWLSD 65
Query: 85 IEAEIKDLEISKNETVSED---WIEQQSFEP 112
E + D E+ + ++++ IE+ EP
Sbjct: 66 FEQKTADQEVKFRQQMAKEALAGIEKLRLEP 96
>gi|322801298|gb|EFZ21985.1| hypothetical protein SINV_11349 [Solenopsis invicta]
Length = 908
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 7/70 (10%)
Query: 31 AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK-------IAGLE 83
AY+IQ FM+ LY ++ K G+FESPTGTGKSLSLICG LKW DH+ ++ +
Sbjct: 13 AYEIQQRFMRELYSCMEGGKLGLFESPTGTGKSLSLICGALKWLVDHEKWRKQELMSAIV 72
Query: 84 KIEAEIKDLE 93
+I++++K E
Sbjct: 73 EIDSKLKSCE 82
>gi|19115889|ref|NP_594977.1| ATP-dependent DNA helicase Chl1 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74581973|sp|O14147.1|CHL1_SCHPO RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|2408082|emb|CAB16287.1| ATP-dependent DNA helicase Chl1 (predicted) [Schizosaccharomyces
pombe]
Length = 844
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
+ F P+ YDIQ FM++LY ++ + K GIFESPTGTGKSLSLIC L W +H L
Sbjct: 11 TNFHHPYTPYDIQLEFMRSLYSSISDGKIGIFESPTGTGKSLSLICASLTWLDEHGGVLL 70
Query: 83 EKIEAEIKDLEISKNETVSE--DWIEQQSFE 111
E E + K+ T S+ DW+ +Q +
Sbjct: 71 EDNEKSNDN----KSNTSSKIPDWVLEQDLK 97
>gi|302654465|ref|XP_003019039.1| hypothetical protein TRV_06940 [Trichophyton verrucosum HKI 0517]
gi|291182731|gb|EFE38394.1| hypothetical protein TRV_06940 [Trichophyton verrucosum HKI 0517]
Length = 859
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+F P+ YDIQ+ FM+ LY +++ GIFESPTGTGKSLSLICG L W DHK
Sbjct: 4 DFRHPYRPYDIQAQFMEALYGCIEDGGVGIFESPTGTGKSLSLICGSLAWLRDHK 58
>gi|325181104|emb|CCA15517.1| ATPdependent RNA helicase putative [Albugo laibachii Nc14]
Length = 587
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
S F FP++ Y IQ +FM++L+ T++N GIFESPTGTGKS+SLICG L W
Sbjct: 17 ASYFSFPYEPYSIQLDFMRSLWQTIENEHIGIFESPTGTGKSMSLICGSLSW 68
>gi|340721189|ref|XP_003399007.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX11-like [Bombus terrestris]
Length = 857
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 32 YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKD 91
Y IQ+ FMK LY L+NSK GIFESPTGTGKS+S+ICG LKW D++ +++ + I +
Sbjct: 14 YPIQTQFMKELYKCLENSKLGIFESPTGTGKSMSIICGALKWLLDYEELQKDELTSAISE 73
Query: 92 L--EISKNETVSEDWIEQQ 108
L +I + +++W Q
Sbjct: 74 LDEQIKQYINSTDNWFSVQ 92
>gi|324515332|gb|ADY46168.1| ATP-dependent RNA helicase chl1, partial [Ascaris suum]
Length = 454
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
EF FPF YDIQ + M+ + ++ K GIFESPTGTGKSLS IC L W + E
Sbjct: 3 EFSFPFPPYDIQVSLMREIRKCVEGGKVGIFESPTGTGKSLSTICATLSWLECFEREQRE 62
Query: 84 KIEAEIKDLEISKNETVSEDWI 105
++E ++KD E N+ +DW+
Sbjct: 63 QLEKQLKDAEEIGNDD-GDDWV 83
>gi|195347574|ref|XP_002040327.1| GM18989 [Drosophila sechellia]
gi|194121755|gb|EDW43798.1| GM18989 [Drosophila sechellia]
Length = 868
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 1 MASKTPNEDKEFKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
+A TPN QR EF FP+ Y+IQ M+ L+ L+ + GIFESPTGT
Sbjct: 8 LAQYTPN-------QRLDTPAAQEFGFPYSPYEIQEQLMQELFQVLERGQVGIFESPTGT 60
Query: 61 GKSLSLICGILKWYSDHKIAGLEKIEAEIKDL-----EISKNETVSEDWIEQQ 108
GKSL+L CG L W + H+ ++ A I+ + E+ + S DW+E Q
Sbjct: 61 GKSLTLTCGALTWLARHEELVRTEMLARIRGVEQELAELEEESEKSSDWLESQ 113
>gi|453084594|gb|EMF12638.1| DNA repair helicase [Mycosphaerella populorum SO2202]
Length = 838
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
+F PF Y IQ FM+ +Y ++ K GIFESPTGTGKSLSLICG L W +HK +
Sbjct: 5 DFHHPFQPYAIQQQFMEGVYDCIEQGKVGIFESPTGTGKSLSLICGSLTWLREHKRKTFD 64
Query: 84 KIEAEIKDLEISKNETVSEDWIEQQS 109
+ A + EI +E + WI + +
Sbjct: 65 EAMASV---EIEDDEPI---WITEHA 84
>gi|358054721|dbj|GAA99647.1| hypothetical protein E5Q_06350 [Mixia osmundae IAM 14324]
Length = 830
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
E P +F P+ YDIQS+ M+++Y ++ S+ I ESPTGTGKSLSLIC L W D+
Sbjct: 6 EPPDDFNHPYKPYDIQSDLMRHVYKAIECSRPAIVESPTGTGKSLSLICSTLSWLRDNTA 65
Query: 80 AGLEKIEAEIKDLEISKNETVSED--WIEQQSFEPTIR 115
+ A DL+ T+S++ W+ +Q +R
Sbjct: 66 RAQTVVRA---DLQAQLAHTLSDEPAWVIEQEIARRLR 100
>gi|448110971|ref|XP_004201733.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
gi|359464722|emb|CCE88427.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
Length = 824
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
+F PF+ YDIQ M+++Y +DN K GIFESPTGTGK+LS+IC + W ++K +E
Sbjct: 14 KFNHPFEPYDIQLELMRSIYDAIDNYKIGIFESPTGTGKTLSIICSTMTWLRNNKKRAIE 73
Query: 84 K 84
K
Sbjct: 74 K 74
>gi|425778625|gb|EKV16743.1| hypothetical protein PDIG_19320 [Penicillium digitatum PHI26]
gi|425784169|gb|EKV21962.1| hypothetical protein PDIP_01290 [Penicillium digitatum Pd1]
Length = 974
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGL- 82
+F P+ Y+IQ FM+ LY L++ K +FESPTGTGKSLSLICG L W DHK
Sbjct: 2 DFHHPYTPYEIQLQFMQALYACLEDGKIAVFESPTGTGKSLSLICGSLTWLRDHKRKAFQ 61
Query: 83 EKIEAEIKD------LEISKNETVSEDWIEQQSFE 111
E ++A D +E +K E+ ++Q FE
Sbjct: 62 ETVDATGDDNEPDWMIEHAKRESRRAITEKRQEFE 96
>gi|242207140|ref|XP_002469424.1| predicted protein [Postia placenta Mad-698-R]
gi|220731453|gb|EED85297.1| predicted protein [Postia placenta Mad-698-R]
Length = 785
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 20 EVPSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+ PSEFP FPF YDIQ + M++LY ++++ K I ESPTGTGK+LSL+C L W D +
Sbjct: 6 QTPSEFPAFPFKPYDIQLDLMRHLYASVEDRKITIVESPTGTGKTLSLLCSSLTWLKDEQ 65
>gi|350399366|ref|XP_003485501.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Bombus
impatiens]
Length = 858
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 32 YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKD 91
Y IQ+ FMK LY +NSK GIFESPTGTGKS+S+ICG LKW D++ +++ + I +
Sbjct: 14 YPIQTQFMKELYKCFENSKLGIFESPTGTGKSMSIICGALKWLLDYEKLQKDELTSAISE 73
Query: 92 L--EISKNETVSEDWIEQQS 109
L +I + +++W Q+
Sbjct: 74 LDEQIKQYINSTDNWFYVQT 93
>gi|367047197|ref|XP_003653978.1| hypothetical protein THITE_2116524 [Thielavia terrestris NRRL
8126]
gi|347001241|gb|AEO67642.1| hypothetical protein THITE_2116524 [Thielavia terrestris NRRL
8126]
Length = 223
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
P +F P+ YD+Q FM+ +Y L+ N + GI ESPTGTGKSLSLIC L W HK
Sbjct: 16 PIDFHHPYQPYDVQLQFMRTVYDVLEKGNGQVGILESPTGTGKSLSLICASLTWLRAHKR 75
Query: 80 A 80
A
Sbjct: 76 A 76
>gi|341878721|gb|EGT34656.1| hypothetical protein CAEBREN_18601 [Caenorhabditis brenneri]
Length = 830
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK----- 78
EF FPF YDIQ M+ + L+ K GIFESPTGTGKSLS++C + W + +
Sbjct: 3 EFSFPFKPYDIQLRLMREIRDCLEQGKVGIFESPTGTGKSLSVLCSTMTWLENEEDRINK 62
Query: 79 --IAGLEKIEAEIKDLEISKNETVSEDWIE 106
I L K EI++ E S +EDW E
Sbjct: 63 ELIERLAKTRKEIRESEKS-----TEDWEE 87
>gi|353235657|emb|CCA67667.1| related to CHL1-protein of the DEAH box family [Piriformospora
indica DSM 11827]
Length = 769
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 17 PLAEVPSEFP-FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY 74
P VP EFP FP+D Y+IQ + M++L+ ++ + + ESPTGTGK+LSL+ G L W
Sbjct: 4 PALPVPEEFPIFPYDKPYNIQLDLMRHLFAAIEGKQVAVVESPTGTGKTLSLLSGSLTWL 63
Query: 75 SDHKIAGLEKIEAEIKDLEISKNETVSEDWIEQQSFE 111
D K ++ + LE S ++ + DW+ +QS E
Sbjct: 64 QDEKS---RAVKGQFAQLEESYSKDNAPDWLVKQSIE 97
>gi|320034910|gb|EFW16853.1| ATP-dependent RNA helicase [Coccidioides posadasii str. Silveira]
Length = 905
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 56/104 (53%), Gaps = 19/104 (18%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT----------GKSLSLICGILKWY 74
F P+ YDIQ FM++LY ++ K GIFESPTGT GKSLSLICG L W
Sbjct: 8 FYHPYSPYDIQVQFMRSLYTCIEECKVGIFESPTGTVSILTPEGGVGKSLSLICGSLTWL 67
Query: 75 SDHKIAG-LEKIE-----AEIKDLEISKNETVSED---WIEQQS 109
DHK + LE IE A I + ++ + +D WI Q S
Sbjct: 68 RDHKRSVFLEDIENSDGRATIACEQFGADQYIGDDEPEWILQYS 111
>gi|149248494|ref|XP_001528634.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|206558158|sp|A5DUW8.1|CHL1_LODEL RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|146448588|gb|EDK42976.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 892
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYS 75
P A ++ P+D YDIQ FM LY TL N K G+FESPTGTGK+LS+IC + W
Sbjct: 7 PSARTCRDYHHPYDPYDIQLQFMDALYETLQNGYKIGMFESPTGTGKTLSIICSSMTWLR 66
Query: 76 DHK 78
D+K
Sbjct: 67 DYK 69
>gi|170089159|ref|XP_001875802.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649062|gb|EDR13304.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 854
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 8/94 (8%)
Query: 20 EVPSEFP-FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
+ P FP FP+D Y IQ + M++LY +++ I ESPTGTGK+LSL+C L W SD
Sbjct: 6 DTPDAFPAFPYDPPYSIQVDLMRHLYTSIEQRAVTIVESPTGTGKTLSLLCAALTWLSD- 64
Query: 78 KIAGLEKIEAEIKDLEISKNETVSEDWIEQQSFE 111
EK A L+ + ++ ++DW+ +Q+ E
Sbjct: 65 -----EKERARRGKLKAAADDGTAKDWVIEQTME 93
>gi|195432086|ref|XP_002064057.1| GK19963 [Drosophila willistoni]
gi|194160142|gb|EDW75043.1| GK19963 [Drosophila willistoni]
Length = 848
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
+EF FP++ Y+IQ M+ ++ L++ + GIFESPTGTGKSL+L C L W H+
Sbjct: 16 TEFGFPYEPYEIQGQLMQQVFQVLESKQIGIFESPTGTGKSLTLTCAALTWLQHHEELVR 75
Query: 83 EKIEAEIKDL--EISKNETVS---EDWIEQQS 109
++ I L EI+K + DWI +Q+
Sbjct: 76 SELRERIARLESEIAKLRELGGQVTDWISEQA 107
>gi|400603430|gb|EJP71028.1| DNA repair helicase [Beauveria bassiana ARSEF 2860]
Length = 868
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYSDHKI-- 79
+F PF YD+Q FM+ +Y L+ + GI ESPTGTGKSLSLIC L W +HK
Sbjct: 18 DFHHPFTPYDVQEKFMRTVYQVLETGEGQVGILESPTGTGKSLSLICASLTWLRNHKSSA 77
Query: 80 --AGLEKIEAEIKD 91
A LE+ ++ KD
Sbjct: 78 YRAALEEAKSSFKD 91
>gi|302889483|ref|XP_003043627.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256724544|gb|EEU37914.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 863
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYSDHKIAG 81
+F P+ YD+Q FMK +Y L+ N + GI ESPTGTGKSLSLIC L W +HK
Sbjct: 17 DFHHPYTPYDVQEQFMKTVYNVLETGNGQVGILESPTGTGKSLSLICASLTWLRNHKSNQ 76
Query: 82 LEK 84
EK
Sbjct: 77 FEK 79
>gi|170582249|ref|XP_001896044.1| helicase [Brugia malayi]
gi|158596835|gb|EDP35112.1| helicase, putative [Brugia malayi]
Length = 733
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
+EF FPF+ YDIQ + M+++ ++ K GI ESPTGTGKS+S+IC L W +
Sbjct: 2 AEFSFPFEPYDIQVSLMRSIISCINEGKIGILESPTGTGKSMSIICATLTWLEXFEAERK 61
Query: 83 EKIEAEIKDLEISKNETVSEDWI 105
+E ++K +E + +DW+
Sbjct: 62 VNLEKQLKXVEXVGKD---DDWL 81
>gi|118388514|ref|XP_001027354.1| DNA repair helicase [Tetrahymena thermophila]
gi|89309124|gb|EAS07112.1| DNA repair helicase [Tetrahymena thermophila SB210]
Length = 836
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
FP++ YDIQ F NLY +L+ K IFESPTGTGKSLSLICG W+ D++
Sbjct: 18 FPYNPYDIQLEFSLNLYESLNVKKLCIFESPTGTGKSLSLICGAFNWFKDNQ 69
>gi|389637597|ref|XP_003716432.1| DEAD_2 domain-containing protein [Magnaporthe oryzae 70-15]
gi|351642251|gb|EHA50113.1| DEAD_2 domain-containing protein [Magnaporthe oryzae 70-15]
Length = 921
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYSDHKIAG 81
+F PF YD+Q +FMK +Y L + GI ESPTGTGKSLSLIC L W +K
Sbjct: 9 DFNHPFTPYDVQLDFMKTVYGVLQRGEGQVGILESPTGTGKSLSLICACLTWLRHYKKKR 68
Query: 82 LEKIEAEIKDLEISKNETVSE-DWIEQQSFE 111
E LE + + T +E DW+ +Q+
Sbjct: 69 FE------VSLETAASSTTNEPDWVVEQALH 93
>gi|307104238|gb|EFN52493.1| hypothetical protein CHLNCDRAFT_58862 [Chlorella variabilis]
Length = 1021
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 18 LAEVPSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
+AE FP FP+ Y IQ +FM LY L+ G+FESPTGTGK+LSLIC L+W D
Sbjct: 1 MAEPGRSFPAFPYPPYSIQLDFMDALYSALEQGGVGLFESPTGTGKTLSLICSSLQWLQD 60
Query: 77 HK 78
+
Sbjct: 61 QR 62
>gi|392560811|gb|EIW53993.1| DNA repair helicase [Trametes versicolor FP-101664 SS1]
Length = 875
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 22 PSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
P +FP FPF YDIQ M ++Y ++N K I ESPTGTGK+LSL+C L W D
Sbjct: 9 PKDFPAFPFKPYDIQLELMSHVYSCIENGKVAITESPTGTGKTLSLLCASLTWLRD---- 64
Query: 81 GLEKIEAEIKDLEISKNETVSEDWIEQQS 109
E+ A L ++ + + DW+ Q+
Sbjct: 65 --EQERARKGKLAMNTDNDDALDWVVAQT 91
>gi|448096961|ref|XP_004198556.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
gi|359379978|emb|CCE82219.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
Length = 824
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
F PF+ YDIQ M+++Y ++N K GIFESPTGTGK+LS+IC + W ++K +E+
Sbjct: 15 FNHPFEPYDIQLELMRSIYDAIENYKIGIFESPTGTGKTLSIICSTMTWLRNNKKKAIER 74
>gi|392896452|ref|NP_499295.2| Protein CHL-1 [Caenorhabditis elegans]
gi|269993268|emb|CAA88959.2| Protein CHL-1 [Caenorhabditis elegans]
Length = 830
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
EF FPF YDIQ N M+ + ++ K GIFESPTGTGKSLS++C + W
Sbjct: 3 EFSFPFQPYDIQLNLMREIRQCIEQRKIGIFESPTGTGKSLSVLCSTMTW 52
>gi|225442629|ref|XP_002279503.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Vitis
vinifera]
Length = 961
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 9/96 (9%)
Query: 13 KEQRPLAEV----PSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
K QR E+ P +FP FP++ Y IQ +FMK LY +L+ + ESPTGTGK+LS+I
Sbjct: 57 KRQRSSGEMEESEPPKFPAFPYEPYSIQIDFMKALYRSLNKGGVSMLESPTGTGKTLSII 116
Query: 68 CGILKWYSDHKIAGLEKIEAEIKDLEISKNETVSED 103
C L+W D K +++++E + T S+D
Sbjct: 117 CSALQWLVDRK----QQLKSEANQTQTPGGGTGSDD 148
>gi|171680426|ref|XP_001905158.1| hypothetical protein [Podospora anserina S mat+]
gi|170939840|emb|CAP65065.1| unnamed protein product [Podospora anserina S mat+]
Length = 154
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWY 74
P +E P +F P+ Y +Q FM+ +Y L+ N + GI ESPTGTGKSLSLIC + W
Sbjct: 4 PTSEEPIDFHHPYTPYPVQLEFMRTVYDVLERGNGQVGILESPTGTGKSLSLICSAITWL 63
Query: 75 SDHKIAGLEKIEAEIKDLEISKNETVSEDWIEQQSFE 111
+HK G + E + + + E + E + ++ E
Sbjct: 64 RNHKRKGFDAGLDETRRQMVGEPEWMVETALRRKREE 100
>gi|212545032|ref|XP_002152670.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210065639|gb|EEA19733.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 887
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTG--TGKSLSLICGILKWYSDHK 78
+F P+ YDIQ FM +LY ++ K GIFESPTG GKSLSLICG L W DHK
Sbjct: 9 KFYHPYTPYDIQLQFMSSLYDCIEAGKVGIFESPTGPCQGKSLSLICGALTWLRDHK 65
>gi|388854508|emb|CCF51895.1| related to CHL1-protein of the DEAH box family [Ustilago hordei]
Length = 931
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 14/100 (14%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
LA +FPFP +AY IQ + M+ ++ T+++ K GIFESPTGTGKSLSLIC W +
Sbjct: 21 LASRQFQFPFP-EAYSIQLDLMRQVFSTIEDGKVGIFESPTGTGKSLSLICAAFTWLRQN 79
Query: 78 KIAGLEKIEAEIKDLEISKNE-----TVSE-DWIEQQSFE 111
+ G +K S NE T+ E DW+ Q E
Sbjct: 80 EQRG-------VKGSSGSSNERNSVGTLDEPDWVVQHEQE 112
>gi|366997252|ref|XP_003678388.1| hypothetical protein NCAS_0J00700 [Naumovozyma castellii CBS 4309]
gi|342304260|emb|CCC72049.1| hypothetical protein NCAS_0J00700 [Naumovozyma castellii CBS 4309]
Length = 832
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
P++F P+ YDIQ M+ +Y L +N K I ESPTGTGK+LSLIC + W ++K
Sbjct: 8 PTDFHHPYKPYDIQLQLMQCIYDVLSENKKIAILESPTGTGKTLSLICSTITWLRENKTN 67
Query: 81 GLEKIEAEIKDLEISKNETVSEDWIEQ 107
L I E ++ S+N+ DW+ +
Sbjct: 68 YLAGISNEKENNNQSENDDDEPDWVNE 94
>gi|46126959|ref|XP_388033.1| hypothetical protein FG07857.1 [Gibberella zeae PH-1]
Length = 863
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+F P+ YD+Q FMK +Y L+ N + GI ESPTGTGKSLSLIC L W +HK
Sbjct: 17 DFHHPYTPYDVQEQFMKAVYDVLESGNGQVGILESPTGTGKSLSLICASLTWLRNHK 73
>gi|290991586|ref|XP_002678416.1| DEAD/DEAH box helicase [Naegleria gruberi]
gi|284092028|gb|EFC45672.1| DEAD/DEAH box helicase [Naegleria gruberi]
Length = 902
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 25 FPFPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
F FP++ YDIQ +M+ L+ T+ + K GIFESPTG+GKSLSLICG L W H
Sbjct: 44 FSFPYEKPYDIQQQYMEQLFDTIQSGKVGIFESPTGSGKSLSLICGALSWLYAH 97
>gi|156050655|ref|XP_001591289.1| hypothetical protein SS1G_07915 [Sclerotinia sclerotiorum 1980]
gi|206557752|sp|A7ERG1.1|CHL1_SCLS1 RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|154692315|gb|EDN92053.1| hypothetical protein SS1G_07915 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 902
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 38/62 (61%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
+F P+ Y IQ FM+ +Y L+ K GI ESPTGTGKSLSLICG L W D K E
Sbjct: 18 DFHHPYTPYPIQEKFMQTVYDVLEQGKIGILESPTGTGKSLSLICGSLTWLRDFKRKEFE 77
Query: 84 KI 85
I
Sbjct: 78 GI 79
>gi|393243158|gb|EJD50674.1| DNA repair helicase [Auricularia delicata TFB-10046 SS5]
Length = 801
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 22 PSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
P FP FPF Y IQ MK+LY ++ SK I ESPTGTGK+LSLIC L+W D +
Sbjct: 12 PDAFPQFPFPPYSIQLELMKHLYAAVEASKLAILESPTGTGKTLSLICSALQWLEDDR 69
>gi|395324700|gb|EJF57135.1| DNA repair helicase [Dichomitus squalens LYAD-421 SS1]
Length = 879
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 22 PSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
P+ FP FPF YDIQ + M++++ +++ K I ESPTGTGK+LSL+C L W
Sbjct: 8 PTHFPAFPFKPYDIQLDLMRHVFSAIEDKKVAIMESPTGTGKTLSLLCASLTWLQH---- 63
Query: 81 GLEKIEAEIKDLEISKNETVSEDWIEQQSFE 111
E+ A LE + DW+ Q+ E
Sbjct: 64 --ERERARTGQLESEGGGSHGTDWVLAQTIE 92
>gi|268574822|ref|XP_002642390.1| Hypothetical protein CBG18394 [Caenorhabditis briggsae]
Length = 834
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
EF FPF YDIQ M+ + +++ K GIFESPTGTGKSLS++C L W + +
Sbjct: 3 EFSFPFQPYDIQLRLMREIRDCIEDGKVGIFESPTGTGKSLSVLCSTLTWLENEE----N 58
Query: 84 KIEAEIKDLEISKNETVSEDWIEQQSFEPTIR 115
+IE E+ + E ++E S+E ++
Sbjct: 59 RIETELNEKLRKIQENIAESKKSGASWEDALK 90
>gi|342878343|gb|EGU79689.1| hypothetical protein FOXB_09802 [Fusarium oxysporum Fo5176]
Length = 864
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+F P+ YD+Q FMK +Y L+ N + GI ESPTGTGKSLSLIC L W +HK
Sbjct: 17 DFHHPYTPYDVQEQFMKAVYDVLETGNGQVGILESPTGTGKSLSLICASLTWLRNHK 73
>gi|449491848|ref|XP_004159020.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Cucumis
sativus]
Length = 1168
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
EFP FP+ Y IQ +FMK LY L+ + ESPTGTGK+LS+ICG L+W +D +
Sbjct: 10 EFPAFPYKPYSIQFDFMKALYEYLNKGGISMLESPTGTGKTLSIICGTLQWLADQR---- 65
Query: 83 EKIEAEIKDL-------EISKNETVSEDWIEQ 107
+K EI+D EI N DW+ +
Sbjct: 66 KKQNGEIQDGPDKTSPNEIQFNSDDEPDWMRK 97
>gi|213404244|ref|XP_002172894.1| fanconi anemia group J protein [Schizosaccharomyces japonicus
yFS275]
gi|212000941|gb|EEB06601.1| fanconi anemia group J protein [Schizosaccharomyces japonicus
yFS275]
Length = 847
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
+F P+ Y IQ +FMK L+ ++N GIFESPTGTGKSLSL+CG L W + GL
Sbjct: 37 KFHHPYIPYSIQLDFMKTLFDVIENGNIGIFESPTGTGKSLSLLCGALTWLDERGSMGL 95
>gi|449448180|ref|XP_004141844.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Cucumis sativus]
Length = 914
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
EFP FP+ Y IQ +FMK LY L+ + ESPTGTGK+LS+ICG L+W +D +
Sbjct: 10 EFPAFPYKPYSIQFDFMKALYEYLNKGGISMLESPTGTGKTLSIICGTLQWLADQR---- 65
Query: 83 EKIEAEIKDL-------EISKNETVSEDWIEQ 107
+K EI+D EI N DW+ +
Sbjct: 66 KKQNGEIQDGPDKTSPNEIQFNSDDEPDWMRK 97
>gi|380495771|emb|CCF32142.1| DNA repair helicase [Colletotrichum higginsianum]
Length = 896
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 11/93 (11%)
Query: 21 VPSEFPF--PFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYSD 76
VP++ F P+ YD+Q++FMK Y L N + GI ESPTGTGKSLSLIC L W +
Sbjct: 13 VPNDIDFNHPYTPYDVQTDFMKTAYGVLQRGNGQVGILESPTGTGKSLSLICASLTWLRN 72
Query: 77 HKIAGLEKIEAEIK-DLEISKNETVSEDWIEQQ 108
++ E+ EA +K +++ K+E DWI +Q
Sbjct: 73 QRV---EEHEASLKVNMDDFKDEP---DWIVEQ 99
>gi|297743271|emb|CBI36138.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 22 PSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
P +FP FP++ Y IQ +FMK LY +L+ + ESPTGTGK+LS+IC L+W D K
Sbjct: 6 PPKFPAFPYEPYSIQIDFMKALYRSLNKGGVSMLESPTGTGKTLSIICSALQWLVDRK-- 63
Query: 81 GLEKIEAEIKDLEISKNETVSED 103
+++++E + T S+D
Sbjct: 64 --QQLKSEANQTQTPGGGTGSDD 84
>gi|147789151|emb|CAN73493.1| hypothetical protein VITISV_017477 [Vitis vinifera]
Length = 914
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 22 PSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
P +FP FP++ Y IQ +FMK LY +L+ + ESPTGTGK+LS+IC L+W D K
Sbjct: 6 PPKFPAFPYEPYSIQIDFMKALYRSLNKGGVSMLESPTGTGKTLSIICSALQWLVDRK-- 63
Query: 81 GLEKIEAEIKDLEISKNETVSED 103
+++++E + T S+D
Sbjct: 64 --QQLKSEANQTQTPGGGTGSDD 84
>gi|297842879|ref|XP_002889321.1| hypothetical protein ARALYDRAFT_477275 [Arabidopsis lyrata subsp.
lyrata]
gi|297335162|gb|EFH65580.1| hypothetical protein ARALYDRAFT_477275 [Arabidopsis lyrata subsp.
lyrata]
Length = 868
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
EFP FP+ Y IQ +FM LY LD + ESPTGTGKSLS+IC L+W D K
Sbjct: 6 EFPAFPYKPYSIQIDFMNALYQFLDKGGVSMLESPTGTGKSLSIICSALQWLIDRK---- 61
Query: 83 EKIEAEIKDLEISKNETVSE-DWIEQQSFEP 112
+K +E + ++ N+ E DW+ ++F P
Sbjct: 62 DKRNSESESHKVDGNDDADEPDWM--RTFTP 90
>gi|50549437|ref|XP_502189.1| YALI0C23639p [Yarrowia lipolytica]
gi|74635004|sp|Q6CAX3.1|CHL1_YARLI RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|49648056|emb|CAG82511.1| YALI0C23639p [Yarrowia lipolytica CLIB122]
Length = 803
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
EF P+ Y IQ +FM+ LY +++ K GIFESPTGTGK+LSLICG + W +K
Sbjct: 8 EFSHPYTPYPIQVDFMEALYDCIESYKVGIFESPTGTGKTLSLICGSMTWLRKNK 62
>gi|116179420|ref|XP_001219559.1| hypothetical protein CHGG_00338 [Chaetomium globosum CBS 148.51]
gi|88184635|gb|EAQ92103.1| hypothetical protein CHGG_00338 [Chaetomium globosum CBS 148.51]
Length = 979
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYSDHKIAG 81
+F P+ YD+Q NFM+ +Y L+ N + GI ESPTGTGKSLSLIC L W HK A
Sbjct: 8 DFHHPYTPYDVQLNFMRTVYDVLERGNGQVGILESPTGTGKSLSLICATLTWLRAHKRAR 67
Query: 82 LE 83
E
Sbjct: 68 YE 69
>gi|346975762|gb|EGY19214.1| fanconi anemia group J protein [Verticillium dahliae VdLs.17]
Length = 838
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+F P+ YD+Q+ FM Y L N + GI ESPTGTGKSLSLIC L W +HK
Sbjct: 9 DFHHPYTPYDVQTQFMTEAYKVLQTGNGQIGILESPTGTGKSLSLICAALTWLRNHK 65
>gi|50312507|ref|XP_456289.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74636409|sp|Q6CIF0.1|CHL1_KLULA RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|49645425|emb|CAG98997.1| KLLA0F27181p [Kluyveromyces lactis]
Length = 807
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
F P+ YDIQ+ M+++Y L++ K GIFESPTGTGK+LSLIC + W +HK LE
Sbjct: 5 FHHPYQPYDIQTQLMEHIYELLNSGKKVGIFESPTGTGKTLSLICSTVTWLREHK---LE 61
Query: 84 KIEAEIKD 91
K+ +++ +
Sbjct: 62 KLNSKVDN 69
>gi|430812749|emb|CCJ29870.1| unnamed protein product [Pneumocystis jirovecii]
Length = 850
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
F PF Y IQ+ FM+ LY ++ IF+SPTGTGKSLS+ICG L W +H LE+
Sbjct: 7 FHHPFKPYKIQNEFMEALYLAIEAGGVSIFDSPTGTGKSLSIICGALTWLREHDYICLEE 66
Query: 85 IEAEIK 90
+ ++
Sbjct: 67 AQKNVQ 72
>gi|443897877|dbj|GAC75216.1| helicase of the DEAD superfamily [Pseudozyma antarctica T-34]
Length = 1454
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
LA FP+P AY IQ + M+ ++ T+++ K G+FESPTGTGKSLSLIC W +
Sbjct: 21 LASRDFSFPYP-QAYSIQLDLMRQVFSTIEDGKVGLFESPTGTGKSLSLICAAFTWLRQN 79
Query: 78 KIAGLEKIEAEIKDLEISKNETVSEDWIEQQS 109
G + A D E DW+ Q +
Sbjct: 80 AKRGTHGLGARGSDDE--------PDWVVQHA 103
>gi|409044127|gb|EKM53609.1| hypothetical protein PHACADRAFT_148290 [Phanerochaete carnosa
HHB-10118-sp]
Length = 859
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 22 PSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
P+ FP FPF YDIQ M++LY ++N + + ESPTGTGK+LSL+C L W D +
Sbjct: 8 PTSFPAFPFAPYDIQLGLMRHLYENIENRRVTVVESPTGTGKTLSLLCASLTWLRDEQ 65
>gi|15220007|ref|NP_178107.1| chromosome transmission fidelity protein 1 [Arabidopsis thaliana]
gi|12324592|gb|AAG52253.1|AC011717_21 putative helicase; 55525-51977 [Arabidopsis thaliana]
gi|332198199|gb|AEE36320.1| chromosome transmission fidelity protein 1 [Arabidopsis thaliana]
Length = 882
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
EFP FP+ Y IQ +FM LY LD + ESPTGTGKSLS+IC L+W +D K
Sbjct: 6 EFPAFPYKPYSIQIDFMNALYQFLDKGGVSMLESPTGTGKSLSIICSALQWLTDRK 61
>gi|440633923|gb|ELR03842.1| hypothetical protein GMDG_01371 [Geomyces destructans 20631-21]
Length = 874
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 6 PNEDKEFKEQRPLAEVPS----EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTG 59
P +D F + A+ P+ +F P+ Y IQ +FM+ +Y L+ +S GI ESPTG
Sbjct: 2 PKQDSLFYDAVAEADNPAMLAVDFHHPYTPYSIQEDFMQTVYSVLERGDSSVGILESPTG 61
Query: 60 TGKSLSLICGILKWYSDHKIAGLEKIEAEIKDLEISKNETVSEDWI 105
TGKSLSLIC L W ++K E+ +++ NE +W+
Sbjct: 62 TGKSLSLICASLTWLREYKRQCFEEW------MKMDSNEEDEPEWV 101
>gi|403222902|dbj|BAM41033.1| uncharacterized protein TOT_030000294 [Theileria orientalis
strain Shintoku]
Length = 745
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
EF PF Y Q FMK+ Y DNS+FG+FESPTG+GK++S++C L W ++++ +
Sbjct: 11 EFHLPFKPYPNQLIFMKDAYECFDNSRFGLFESPTGSGKTVSILCSALTWLKNNRVKSV 69
>gi|294654380|ref|XP_456430.2| DEHA2A02112p [Debaryomyces hansenii CBS767]
gi|218511979|sp|Q6BZD9.2|CHL1_DEBHA RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|199428836|emb|CAG84382.2| DEHA2A02112p [Debaryomyces hansenii CBS767]
Length = 820
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
++ PF+ YDIQ M +Y +DN K G+FESPTGTGK+LSLIC + W ++K
Sbjct: 15 KYNHPFEPYDIQIQLMDAIYDAIDNYKIGLFESPTGTGKTLSLICSSMTWLREYK 69
>gi|408390405|gb|EKJ69805.1| hypothetical protein FPSE_10005 [Fusarium pseudograminearum CS3096]
Length = 863
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYSDHKIAG 81
+F P+ YD+Q FMK +Y L+ N + GI ESPTGTGKSLSLIC L W +HK
Sbjct: 17 DFHHPYTPYDVQEQFMKAVYDVLESGNGQVGILESPTGTGKSLSLICASLTWLRNHKS-- 74
Query: 82 LEKIEAEIKD-LEISKNETVSEDWIEQQ 108
+ EA I++ E K+E W+ +Q
Sbjct: 75 -NQFEASIQESAEAYKDEP---SWLVEQ 98
>gi|428173412|gb|EKX42314.1| hypothetical protein GUITHDRAFT_141266 [Guillardia theta
CCMP2712]
Length = 864
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
EF FPF Y +Q M +Y L + GIFESPTGTGKS+SLIC L+W ++ +
Sbjct: 5 EFKFPFSPYTVQVQLMTAVYGALCDGAVGIFESPTGTGKSMSLICSSLRWLKENPV 60
>gi|354547011|emb|CCE43744.1| hypothetical protein CPAR2_213880 [Candida parapsilosis]
Length = 790
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYSDHKI 79
+ + PF YDIQ M +Y T++N K G+FESPTGTGK+LS+IC + W D+K
Sbjct: 6 IRRNYHHPFAPYDIQLKLMDAIYDTIENGYKIGLFESPTGTGKTLSIICSTMTWLRDYKR 65
Query: 80 AGLEKIEAE 88
+ +I+AE
Sbjct: 66 NHVFEIDAE 74
>gi|358383392|gb|EHK21058.1| hypothetical protein TRIVIDRAFT_59546 [Trichoderma virens Gv29-8]
Length = 872
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYSDHKIAG 81
+F PF YD+Q+ FM+ +Y L+ + GI ESPTGTGKSLSLIC L W +HK
Sbjct: 18 DFHHPFTPYDVQNQFMQTVYQVLETGQGQVGILESPTGTGKSLSLICASLTWLRNHKAT- 76
Query: 82 LEKIEAEIKDL-EISKNETVSEDWIEQQ 108
+ EAE++ E K+E WI +Q
Sbjct: 77 --RQEAELQVAGESYKDEPA---WIVEQ 99
>gi|452840275|gb|EME42213.1| hypothetical protein DOTSEDRAFT_81172 [Dothistroma septosporum
NZE10]
Length = 836
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 36/54 (66%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
F PF+ Y IQ +FM +Y ++ GIFESPTGTGKSLSL+C L W +HK
Sbjct: 6 FHHPFEPYSIQLDFMTAMYDCIEEGSVGIFESPTGTGKSLSLLCASLTWLREHK 59
>gi|392591953|gb|EIW81280.1| DNA repair helicase [Coniophora puteana RWD-64-598 SS2]
Length = 867
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 22 PSEFP-FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
P FP FP+D Y IQ++ M+++Y +++ K I ESPTGTGK+LSL+C L W +D
Sbjct: 8 PDTFPAFPYDPPYSIQTDLMRHVYASIEGRKVTIVESPTGTGKTLSLLCSSLTWLND--- 64
Query: 80 AGLEKIEAEIKDLEISKNETVSEDWIEQQSFE 111
EK A LE S + + W+ S +
Sbjct: 65 ---EKNRARKGLLEASTSTSTMPSWVSAHSIQ 93
>gi|224059074|ref|XP_002299703.1| predicted protein [Populus trichocarpa]
gi|222846961|gb|EEE84508.1| predicted protein [Populus trichocarpa]
Length = 918
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FP+ Y IQ +FMK LY++L+ I ESPTGTGK+LS+IC L+W D + K++
Sbjct: 6 FPYKPYSIQIDFMKALYHSLNQGGVSILESPTGTGKTLSIICSALQWVYDRRQQDKSKVQ 65
Query: 87 AE 88
+
Sbjct: 66 VQ 67
>gi|310791719|gb|EFQ27246.1| DNA repair helicase [Glomerella graminicola M1.001]
Length = 897
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 9/88 (10%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYSDHKIAG 81
+F P+ YD+Q++FMK Y L N + GI ESPTGTGKSLSLIC L W + ++
Sbjct: 18 DFNHPYTPYDVQTDFMKAAYRVLQRGNGQVGILESPTGTGKSLSLICASLTWLRNQRV-- 75
Query: 82 LEKIEAEIK-DLEISKNETVSEDWIEQQ 108
E+ EA +K +++ K+E WI +Q
Sbjct: 76 -EEHEASLKVNMDDFKDEP---GWIVEQ 99
>gi|440895926|gb|ELR47985.1| Putative ATP-dependent RNA helicase DDX11, partial [Bos grunniens
mutus]
Length = 924
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPFPF Y IQ +FM LY L+ K GIFESPTGTG LICG L W D
Sbjct: 13 FPFPFTPYAIQKDFMAALYQVLEAGKIGIFESPTGTG---CLICGALSWLRD 61
>gi|150863715|ref|XP_001382279.2| YPL008W (CHL1)-like protein [Scheffersomyces stipitis CBS 6054]
gi|206558237|sp|A3LN13.2|CHL1_PICST RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|149384971|gb|ABN64250.2| syntenic [Scheffersomyces stipitis CBS 6054]
Length = 835
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYSDHK 78
+ + P+ YDIQ M +Y T+DN K G+FESPTGTGK+LS+IC + W D+K
Sbjct: 10 NRYSHPYKPYDIQIQLMDAIYDTIDNGYKIGLFESPTGTGKTLSIICSTMTWLRDYK 66
>gi|297723833|ref|NP_001174280.1| Os05g0219800 [Oryza sativa Japonica Group]
gi|255676141|dbj|BAH93008.1| Os05g0219800, partial [Oryza sativa Japonica Group]
Length = 181
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
+FP FPF Y IQS FM LY L + + ESPTGTGK+LS+IC L+W DH+ A
Sbjct: 36 DFPAFPFAPYPIQSEFMSFLYGALSSGPGALALLESPTGTGKTLSIICSALQWLVDHRDA 95
Query: 81 GLEKIEAEIKDLEISKNETVSEDWIE 106
+ + DW+
Sbjct: 96 AARGSTTAAAAGGGGEGDGDEPDWMR 121
>gi|296804606|ref|XP_002843155.1| DEAD_2 domain-containing protein [Arthroderma otae CBS 113480]
gi|238845757|gb|EEQ35419.1| DEAD_2 domain-containing protein [Arthroderma otae CBS 113480]
Length = 854
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTG---TGKSLSLICGILKWYSDHK 78
+F P+ YDIQ+ FM+ LY +++ GIFESPTG GKSLSLICG L W HK
Sbjct: 4 DFRHPYRPYDIQAQFMEALYGCIEDGGIGIFESPTGESTAGKSLSLICGSLAWLRHHK 61
>gi|148706380|gb|EDL38327.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae), isoform CRA_a [Mus musculus]
Length = 942
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 34 IQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAE 88
IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K++AE
Sbjct: 58 IQKDFMAELYKVLEGGKIGIFESPTGTGKSLSLICGALSWLRDFE---KKKLQAE 109
>gi|293350107|ref|XP_001070646.2| PREDICTED: probable ATP-dependent RNA helicase DDX11 [Rattus
norvegicus]
Length = 845
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 34 IQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAE 88
IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K++AE
Sbjct: 22 IQKDFMAELYKVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKKLQAE 73
>gi|51491862|ref|NP_001003919.1| probable ATP-dependent RNA helicase DDX11 [Mus musculus]
gi|81884425|sp|Q6AXC6.1|DDX11_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX11; AltName:
Full=DEAD/H box protein 11
gi|50926041|gb|AAH79656.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like
helicase homolog, S. cerevisiae) [Mus musculus]
Length = 880
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 34 IQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAE 88
IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K++AE
Sbjct: 22 IQKDFMAELYKVLEGGKIGIFESPTGTGKSLSLICGALSWLRDFE---KKKLQAE 73
>gi|145512032|ref|XP_001441938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409199|emb|CAK74541.1| unnamed protein product [Paramecium tetraurelia]
Length = 927
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 13 KEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILK 72
K+Q+ L+ +E FP YD+Q +M+++ +LD + ESPTGTGK+LSL+C L
Sbjct: 43 KKQQTLSLAYTEIYFPHKPYDVQLKYMESVVQSLDRKHNALLESPTGTGKTLSLLCASLG 102
Query: 73 WYSDHK 78
W S H+
Sbjct: 103 WLSKHR 108
>gi|340518246|gb|EGR48488.1| predicted protein [Trichoderma reesei QM6a]
Length = 857
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 9/88 (10%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYSDHKIAG 81
+F P+ YD+Q+ FM+ +Y L+ N + GI ESPTGTGKSLSLIC L W ++K
Sbjct: 16 DFHHPYTPYDVQNQFMQTVYQVLETGNGQVGILESPTGTGKSLSLICASLTWLRNYKAT- 74
Query: 82 LEKIEAEIKDL-EISKNETVSEDWIEQQ 108
+ EA +++ E K+E WI +Q
Sbjct: 75 --RQEAALQEAGESYKDEPA---WIVEQ 97
>gi|45201086|ref|NP_986656.1| AGL010Wp [Ashbya gossypii ATCC 10895]
gi|74691951|sp|Q750G3.1|CHL1_ASHGO RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|44985869|gb|AAS54480.1| AGL010Wp [Ashbya gossypii ATCC 10895]
gi|374109907|gb|AEY98812.1| FAGL010Wp [Ashbya gossypii FDAG1]
Length = 801
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
EF PF Y IQ M+ +Y L++ K GIFESPTGTGK+LSLIC W +HK L
Sbjct: 5 EFYHPFTPYRIQLELMQQIYGLLESGKKMGIFESPTGTGKTLSLICSTFTWLREHKAGYL 64
Query: 83 E 83
+
Sbjct: 65 Q 65
>gi|319411548|emb|CBQ73592.1| related to CHL1-protein of the DEAH box family [Sporisorium
reilianum SRZ2]
Length = 932
Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 19 AEVPS-EFPFPF-DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
AE+ S EF FP+ AY IQ + M+ ++ T+++ K G+FESPTGTGKSLSLIC W
Sbjct: 19 AELASREFQFPYPQAYSIQLDLMRQVFSTIEDGKVGLFESPTGTGKSLSLICAAFTW 75
>gi|255723968|ref|XP_002546913.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134804|gb|EER34358.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 812
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 4/64 (6%)
Query: 16 RPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWY 74
+P E ++ P++ YDIQ M +Y+T+D+ K G+FESPTGTGK+LS+IC + W
Sbjct: 4 KPCGE---KYNHPYEPYDIQVQLMDAIYHTIDDGYKIGLFESPTGTGKTLSIICSTMTWL 60
Query: 75 SDHK 78
++K
Sbjct: 61 RNYK 64
>gi|367007804|ref|XP_003688631.1| hypothetical protein TPHA_0P00390 [Tetrapisispora phaffii CBS
4417]
gi|357526941|emb|CCE66197.1| hypothetical protein TPHA_0P00390 [Tetrapisispora phaffii CBS
4417]
Length = 825
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+ F P+ YDIQ M+ +Y TL N K I ESPTGTGK+LSLIC I+ W D+K
Sbjct: 5 ANFGHPYQPYDIQIQLMQCIYDTLTQNKKLAILESPTGTGKTLSLICSIVSWLRDNK 61
>gi|354492614|ref|XP_003508442.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Cricetulus griseus]
Length = 771
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 34 IQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKDL 92
IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + ++++AE + L
Sbjct: 22 IQKDFMAELYKVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKRLQAEARLL 77
>gi|254571493|ref|XP_002492856.1| Conserved nuclear protein required to establish sister-chromatid
pairing during S-phase [Komagataella pastoris GS115]
gi|238032654|emb|CAY70677.1| Conserved nuclear protein required to establish sister-chromatid
pairing during S-phase [Komagataella pastoris GS115]
gi|328353133|emb|CCA39531.1| chromosome transmission fidelity protein 1 [Komagataella pastoris
CBS 7435]
Length = 811
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYSDHKI---- 79
F PF YDIQ+ M +Y T+ K G+FESPTGTGK+LS+IC ++ W ++K
Sbjct: 4 FHHPFKPYDIQTQLMTAIYDTIAGGYKVGLFESPTGTGKTLSIICSVMSWLREYKTKNPD 63
Query: 80 AGLEKIEAEIKDLE 93
G ++ E E+ D E
Sbjct: 64 QGSQQNETEVSDDE 77
>gi|344233991|gb|EGV65861.1| hypothetical protein CANTEDRAFT_101726 [Candida tenuis ATCC
10573]
Length = 807
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
+F P++ YDIQ M +Y +D K G+FESPTGTGK+LSLIC + W HK L
Sbjct: 7 KFHHPYEPYDIQLQLMGEIYEAIDKGFKVGLFESPTGTGKTLSLICATMSWLRKHKNTNL 66
>gi|356522168|ref|XP_003529720.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Glycine max]
Length = 897
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
+FP FPF+ Y IQ +FM +LY +L+ + ESPTGTGK++S+IC L+W D ++
Sbjct: 9 KFPGFPFEPYSIQIDFMNSLYESLNQGGVSMLESPTGTGKTMSVICSALQWVLDRRL 65
>gi|71018229|ref|XP_759345.1| hypothetical protein UM03198.1 [Ustilago maydis 521]
gi|46099195|gb|EAK84428.1| hypothetical protein UM03198.1 [Ustilago maydis 521]
Length = 1496
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 24 EFPFPF-DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+F FP+ +AY IQ + M+ ++ T+++ K G+FESPTGTGKSLSLIC W
Sbjct: 24 QFHFPYAEAYSIQLDLMRKVFSTIEDGKVGLFESPTGTGKSLSLICAAFTW 74
>gi|313241207|emb|CBY33490.1| unnamed protein product [Oikopleura dioica]
Length = 761
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKDLEISKNE 98
MK +Y +++ K GIFESPTGTGKSLS+IC +KW DH+ + E + ++ K E
Sbjct: 1 MKAIYTAIEDRKIGIFESPTGTGKSLSIICSAIKWLKDHR----NRAELGTQQPKVDKEE 56
Query: 99 TVSEDWIE 106
DW+E
Sbjct: 57 DGELDWLE 64
>gi|302689377|ref|XP_003034368.1| hypothetical protein SCHCODRAFT_53201 [Schizophyllum commune
H4-8]
gi|300108063|gb|EFI99465.1| hypothetical protein SCHCODRAFT_53201 [Schizophyllum commune
H4-8]
Length = 869
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 22 PSEFP-FPF-DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
PSEFP FP+ Y IQ + M++LY L++ K I ESPTGTGK+LSL+ L W DH+
Sbjct: 14 PSEFPSFPYPQPYQIQLDLMRHLYEVLESKKISIVESPTGTGKTLSLLTASLTWLRDHQ 72
>gi|261327010|emb|CBH09985.1| helicase, putative [Trypanosoma brucei gambiense DAL972]
Length = 963
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
E FPF Y +Q +M+++ Y L S + ESPTGTGK+L L+CG+L W + +I L
Sbjct: 10 EVSFPFAPYPVQEEYMRSVIYALKGSHNALLESPTGTGKTLCLLCGVLAWLDERRICFL 68
>gi|72386955|ref|XP_843902.1| helicase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62359030|gb|AAX79479.1| helicase, putative [Trypanosoma brucei]
gi|70800434|gb|AAZ10343.1| helicase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 963
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
E FPF Y +Q +M+++ Y L S + ESPTGTGK+L L+CG+L W + +I L
Sbjct: 10 EVSFPFAPYPVQEEYMRSVIYALKGSHNALLESPTGTGKTLCLLCGVLAWLDERRICFL 68
>gi|148706381|gb|EDL38328.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae), isoform CRA_b [Mus musculus]
Length = 429
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 34 IQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAE 88
IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K++AE
Sbjct: 58 IQKDFMAELYKVLEGGKIGIFESPTGTGKSLSLICGALSWLRDFE---KKKLQAE 109
>gi|344252420|gb|EGW08524.1| putative ATP-dependent RNA helicase DDX11 [Cricetulus griseus]
Length = 502
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 34 IQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKDL 92
IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + ++++AE + L
Sbjct: 22 IQKDFMAELYKVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKRLQAEARLL 77
>gi|358336548|dbj|GAA37929.2| chromosome transmission fidelity protein 1, partial [Clonorchis
sinensis]
Length = 753
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 12/93 (12%)
Query: 21 VPSEFP-FPF-DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+P EFP FPF + Y Q M+++Y TL+ S+ GIF+SPTGTGKSLSL+ L+W D
Sbjct: 78 IPKEFPDFPFPNPYPQQLALMQSIYDTLERSRCGIFQSPTGTGKSLSLLTASLRWILDRN 137
Query: 79 IAGLEKIEAEIKDLE-----ISKNETVSE-DWI 105
++ ++KDL I+ T S+ DW+
Sbjct: 138 ----STVQPKLKDLREKLKAINALSTQSDLDWV 166
>gi|428672406|gb|EKX73320.1| conserved hypothetical protein [Babesia equi]
Length = 822
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 42/61 (68%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
+F PF+ Y Q FMK+ Y D S+FG+FESPTG+GK+++++ ++ W + +++ GL
Sbjct: 11 DFNLPFEPYKHQLLFMKDAYECFDKSRFGLFESPTGSGKTIAILAAMIAWLNKNRVRGLM 70
Query: 84 K 84
+
Sbjct: 71 R 71
>gi|413944886|gb|AFW77535.1| hypothetical protein ZEAMMB73_304929, partial [Zea mays]
Length = 71
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
+FP FPF Y IQS FM LY L + + ESPTGTGK+LS+IC L+W DH+ A
Sbjct: 8 DFPAFPFAPYPIQSEFMSFLYAALSSGPGALALLESPTGTGKTLSIICSALQWLLDHREA 67
Query: 81 GL 82
+
Sbjct: 68 AV 69
>gi|85001257|ref|XP_955347.1| chl1 protein [Theileria annulata strain Ankara]
gi|65303493|emb|CAI75871.1| chl1 protein, putative [Theileria annulata]
Length = 829
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 19 AEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
AEV EF PF+ Y Q FMK+ Y D S FG+FESPTG+GK+LS++C L W +++
Sbjct: 8 AEV--EFELPFEPYPNQLIFMKDAYKCFDESSFGLFESPTGSGKTLSILCSALTWIKNNR 65
>gi|344303265|gb|EGW33539.1| ATP-dependent RNA helicase CHL1 [Spathaspora passalidarum NRRL
Y-27907]
Length = 816
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYSDHK 78
P ++ P+D Y IQ M +Y T+ N K GIFESPTGTGK+LSLIC + W +K
Sbjct: 7 PRKYNHPYDPYTIQIQLMNAVYDTISNDYKIGIFESPTGTGKTLSLICSSMTWLRHYK 64
>gi|50293497|ref|XP_449160.1| hypothetical protein [Candida glabrata CBS 138]
gi|74637307|sp|Q6FKT4.1|CHL1_CANGA RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|49528473|emb|CAG62130.1| unnamed protein product [Candida glabrata]
Length = 830
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDN--SKFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
++F P+ YDIQ + M+ +Y TL N K I ESPTGTGK+LSLIC L W D+K
Sbjct: 5 TKFHHPYSPYDIQLDLMQCVYDTLANPVKKVAIVESPTGTGKTLSLICSTLTWLRDNKAD 64
Query: 81 GLEKIEA 87
L ++
Sbjct: 65 ILSSVDT 71
>gi|256073269|ref|XP_002572954.1| chl1 helicase homolog [Schistosoma mansoni]
gi|353230973|emb|CCD77390.1| putative chl1 helicase homolog [Schistosoma mansoni]
Length = 830
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 14/104 (13%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSDHKIA 80
+FP+P Y Q M+ +Y TL+++ GIFESPTGTGKSLSL+ L+W Y++ +I
Sbjct: 62 DFPYP-KPYSQQLELMQTVYKTLESNCCGIFESPTGTGKSLSLLTATLRWLLDYNEKQII 120
Query: 81 GLEKIEAEIKDL--EISKNETVSEDWIEQ--------QSFEPTI 114
L +++++K + E +N + DWI + Q EP I
Sbjct: 121 LLNSLQSQLKLMNHENKENNSKEYDWIMEYDKNRLLKQQIEPQI 164
>gi|357129541|ref|XP_003566420.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Brachypodium distachyon]
Length = 932
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
+FP FPF Y IQS FM LY L + + ESPTGTGK+LS+IC L+W DH+ A
Sbjct: 82 DFPAFPFTPYPIQSEFMSFLYAALSSGPRALALLESPTGTGKTLSIICSALQWLVDHREA 141
Query: 81 G 81
Sbjct: 142 A 142
>gi|357468391|ref|XP_003604480.1| ATP-dependent RNA helicase chl1 [Medicago truncatula]
gi|355505535|gb|AES86677.1| ATP-dependent RNA helicase chl1 [Medicago truncatula]
Length = 1129
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAG 81
P+ FPF Y IQ +FM LY +L++ + ESPTGTGK++S+IC L+W D +
Sbjct: 12 PNFSAFPFKPYSIQIDFMNALYQSLNHGGISMLESPTGTGKTMSVICSALQWVLDQR--- 68
Query: 82 LEKIEAEIKDLEIS-KNETVSED 103
++ E EI +S KNE D
Sbjct: 69 -QRDEEEITLGSVSGKNENQGSD 90
>gi|154308673|ref|XP_001553672.1| hypothetical protein BC1G_07759 [Botryotinia fuckeliana B05.10]
Length = 80
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 1 MASKTPNEDKEFKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
+++ T + D E + P ++ P+ Y IQ FM+ ++ L+ K GI ESPTGT
Sbjct: 3 LSNNTSDMDTEIEIHSP----GRDWHHPYTPYPIQETFMQTVWEVLEEGKIGILESPTGT 58
Query: 61 GKSLSLICGILKW 73
GKSLSLICG + W
Sbjct: 59 GKSLSLICGGVTW 71
>gi|157120352|ref|XP_001653621.1| regulator of telomere elongation helicase 1 rtel1 [Aedes aegypti]
gi|122117342|sp|Q16X92.1|RTEL1_AEDAE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|108875002|gb|EAT39227.1| AAEL008960-PA [Aedes aegypti]
Length = 1010
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FPF+ Y +Q ++M + L NS G+ ESPTGTGK+LSL+C L W K +
Sbjct: 13 FPFEPYQVQRDYMSRVIECLQNSTNGVLESPTGTGKTLSLLCSSLAWVLHKKAQVQANMR 72
Query: 87 AEIKDLE 93
I DL+
Sbjct: 73 TNITDLK 79
>gi|254583620|ref|XP_002497378.1| ZYRO0F04136p [Zygosaccharomyces rouxii]
gi|238940271|emb|CAR28445.1| ZYRO0F04136p [Zygosaccharomyces rouxii]
Length = 803
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYSDHK 78
F P+D YDIQ M+ +Y L + K I ESPTGTGK+LSLIC +L W D+K
Sbjct: 5 FNHPYDPYDIQLELMRCVYDALSHGKKLCIVESPTGTGKTLSLICSVLTWLRDNK 59
>gi|255710557|ref|XP_002551562.1| KLTH0A02376p [Lachancea thermotolerans]
gi|238932939|emb|CAR21120.1| KLTH0A02376p [Lachancea thermotolerans CBS 6340]
Length = 821
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYSDHKI--AG 81
+ PF YDIQ M +Y TL++ K GIFESPTGTGK+LSLIC + W +K G
Sbjct: 7 YGHPFQPYDIQLQLMHQVYNTLESGKKIGIFESPTGTGKTLSLICPTVTWLRRNKAHYMG 66
Query: 82 LEKIEAEIKDLEISKNETVSED---WIEQQSFEPTIR 115
K + D ++K++ S++ W+++ E I+
Sbjct: 67 KSKETSSSVDGNLTKSDDESDEEPSWVKEAFAESVIK 103
>gi|302802273|ref|XP_002982892.1| hypothetical protein SELMODRAFT_116951 [Selaginella
moellendorffii]
gi|300149482|gb|EFJ16137.1| hypothetical protein SELMODRAFT_116951 [Selaginella
moellendorffii]
Length = 852
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
EFP FPF Y IQ M+ +Y L+ I ESPTGTGK+LSLIC +L+W D
Sbjct: 5 EFPAFPFQPYAIQLQLMRAVYGALEKGGVAIVESPTGTGKTLSLICSVLQWLED 58
>gi|448514499|ref|XP_003867130.1| Chl1 protein [Candida orthopsilosis Co 90-125]
gi|380351468|emb|CCG21692.1| Chl1 protein [Candida orthopsilosis Co 90-125]
Length = 808
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYSDHK 78
+ + PF YDIQ M +Y T++N K G+FESPTGTGK+LS+IC + W ++K
Sbjct: 19 ICRNYNHPFTPYDIQVQLMDAIYDTIENGYKVGLFESPTGTGKTLSIICSTMTWLREYK 77
>gi|328853665|gb|EGG02802.1| hypothetical protein MELLADRAFT_38383 [Melampsora larici-populina
98AG31]
Length = 791
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 17/91 (18%)
Query: 33 DIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-YSDHK------IAGL-EK 84
DIQ FM++L+ ++ K GIFESPTGTGKSLS+IC L W +SD + +A L K
Sbjct: 3 DIQKEFMRHLFQAVEEHKVGIFESPTGTGKSLSIICSTLTWLHSDRRRLTEEAVATLTAK 62
Query: 85 IEAEIKDLEISKNETVSEDWIEQQSFEPTIR 115
++A+ D DW+ +Q E R
Sbjct: 63 LKADCPD---------EPDWVLKQDIERKKR 84
>gi|358390776|gb|EHK40181.1| hypothetical protein TRIATDRAFT_296192 [Trichoderma atroviride
IMI 206040]
Length = 871
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYSDHK 78
+F PF Y +Q+ FM+ +Y L + GI ESPTGTGKSLSLIC L W +HK
Sbjct: 17 DFHHPFTPYTVQNQFMRTVYQILQTGEGQVGILESPTGTGKSLSLICASLTWLRNHK 73
>gi|340931927|gb|EGS19460.1| hypothetical protein CTHT_0049210 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 918
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYSDHK 78
F P+ YD+Q FM+ +Y L+ + GI ESPTGTGKSLSLIC L W HK
Sbjct: 21 FHHPYTPYDVQLQFMRTVYNILEKGGGQVGILESPTGTGKSLSLICSALTWLRHHK 76
>gi|125551293|gb|EAY97002.1| hypothetical protein OsI_18924 [Oryza sativa Indica Group]
Length = 877
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
+FP FPF Y IQS FM LY L + + ESPTGTGK+LS+IC L+W DH+ A
Sbjct: 14 DFPAFPFAPYPIQSEFMSFLYGALSSGPGALALLESPTGTGKTLSIICSALQWLVDHRDA 73
Query: 81 G 81
Sbjct: 74 A 74
>gi|406606908|emb|CCH41762.1| chromosome transmission fidelity protein 1 [Wickerhamomyces
ciferrii]
Length = 814
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 15 QRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKW 73
Q + +++ P+ YDIQ +FM + TL+ K GIFESPTGTGK+LSLIC + W
Sbjct: 2 QNDIQTKKNDYNHPYQPYDIQIDFMNAVNETLNGGYKIGIFESPTGTGKTLSLICSTVTW 61
Query: 74 YSDH 77
H
Sbjct: 62 LRSH 65
>gi|320581727|gb|EFW95946.1| ATP-dependent RNA helicase Chl1, putative [Ogataea parapolymorpha
DL-1]
Length = 802
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
F P+ YD+Q M+ +Y TL N K GIFESPTGTGK+LS+IC + W + K
Sbjct: 10 RFNHPYTPYDVQVKLMEAIYDTLTGNYKVGIFESPTGTGKTLSIICSTMTWLRELK 65
>gi|194383312|dbj|BAG64627.1| unnamed protein product [Homo sapiens]
Length = 288
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 27/38 (71%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
M LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 38
>gi|452822263|gb|EME29284.1| putative DNA helicase required for mitotic chromosome segregation
CHL1 [Galdieria sulphuraria]
Length = 984
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
P +E FP++ Y +Q FM+ + +NS+ + ESPTGTGKSL+L+C +L W
Sbjct: 2 PFQVYGTEIEFPYEPYPVQFVFMEKILRACENSQNALLESPTGTGKSLALLCAVLAWQKK 61
Query: 77 HK-IAGLEKIEAE 88
K LE+IE E
Sbjct: 62 TKNKMQLERIEKE 74
>gi|242087257|ref|XP_002439461.1| hypothetical protein SORBIDRAFT_09g007182 [Sorghum bicolor]
gi|241944746|gb|EES17891.1| hypothetical protein SORBIDRAFT_09g007182 [Sorghum bicolor]
Length = 82
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYSDHK 78
+FP FPF Y IQS FM LY L + + ESPTGTGK+LS+IC L+W DH+
Sbjct: 13 DFPAFPFAPYPIQSEFMSFLYAALSSGPGALALLESPTGTGKTLSIICSALQWLLDHR 70
>gi|91080377|ref|XP_975038.1| PREDICTED: similar to fanconi anemia group J protein [Tribolium
castaneum]
Length = 750
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF YDIQ+ +M+ + L+N + GI ESPTGTGK+LSL+C L W
Sbjct: 13 FPFAPYDIQTKYMEKVIDCLENRQNGILESPTGTGKTLSLLCASLAW 59
>gi|182705254|sp|Q92771.3|DDX12_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DDX12; AltName:
Full=CHL1-related protein 2; Short=hCHLR2; AltName:
Full=DEAD/H box protein 12
Length = 950
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 35 QSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKDLE 93
+ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K E E + LE
Sbjct: 42 KEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKKREEEARLLE 97
>gi|443915597|gb|ELU36981.1| CHL1 helicase [Rhizoctonia solani AG-1 IA]
Length = 803
Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 21 VPSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
P FP FPF YDIQ MK+LY L++ K GKSLSL+CG + W D+K
Sbjct: 9 TPESFPAFPFQPYDIQLELMKSLYTALEDRKI---------GKSLSLLCGAMTWLRDNK- 58
Query: 80 AGLEKIEAEIKDLEIS-KNETVSEDWIEQQSFEPTIR 115
I E++DL++S +++ W+ +Q + R
Sbjct: 59 --QRAIRGELEDLKLSIQSDDAEPGWVSRQMLDKHKR 93
>gi|299743627|ref|XP_001835886.2| CHL1 helicase [Coprinopsis cinerea okayama7#130]
gi|298405743|gb|EAU85951.2| CHL1 helicase [Coprinopsis cinerea okayama7#130]
Length = 905
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 22 PSEFP-FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
PS+FP FP+D Y IQ + M+++Y ++ I ESPTGTGK+L+L+C L W D K
Sbjct: 54 PSDFPAFPYDPPYAIQVDLMRHVYEAIEKKHVTIVESPTGTGKTLTLLCSSLTWLLDEKD 113
Query: 80 AGLEKIEAEIKDLEISKNETVSEDWIEQQSF 110
+ ++K++ E +DW+ +Q+
Sbjct: 114 RAR---KGKLKEVAGVDGEEEVKDWVIEQTL 141
>gi|260946235|ref|XP_002617415.1| hypothetical protein CLUG_02859 [Clavispora lusitaniae ATCC
42720]
gi|238849269|gb|EEQ38733.1| hypothetical protein CLUG_02859 [Clavispora lusitaniae ATCC
42720]
Length = 825
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 14 EQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILK 72
E+ L + ++ P++ Y IQ+ M +Y T++N K G+FESPTGTGK+LS+IC +
Sbjct: 5 ERVTLWLMTRDYSHPYEPYKIQNELMDAIYETVNNGFKVGLFESPTGTGKTLSIICSTMT 64
Query: 73 WYSDHK 78
W D K
Sbjct: 65 WLRDFK 70
>gi|164657658|ref|XP_001729955.1| hypothetical protein MGL_2941 [Malassezia globosa CBS 7966]
gi|159103849|gb|EDP42741.1| hypothetical protein MGL_2941 [Malassezia globosa CBS 7966]
Length = 891
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK---IAG 81
FP+P AY IQ + M L+ T++ K G+FESPTGTGK+LSL+C L W ++ I G
Sbjct: 31 FPYP-TAYRIQLDLMSALFDTIEQGKAGVFESPTGTGKTLSLLCSALTWLEMNRQRHILG 89
Query: 82 LEKIEAEIKDLEISKNETVSEDWI 105
+ + E K+ + +W+
Sbjct: 90 V-RASTETKETATGGEDDSEPEWV 112
>gi|302818654|ref|XP_002991000.1| hypothetical protein SELMODRAFT_132642 [Selaginella
moellendorffii]
gi|300141331|gb|EFJ08044.1| hypothetical protein SELMODRAFT_132642 [Selaginella
moellendorffii]
Length = 834
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 24 EFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
+FP FPF Y IQ M+ +Y L+ I ESPTGTGK+LSLIC +L+W D
Sbjct: 5 QFPAFPFQPYAIQLQLMRAVYGALEKGGVAIVESPTGTGKTLSLICSVLQWLED 58
>gi|195131929|ref|XP_002010396.1| GI15901 [Drosophila mojavensis]
gi|229891624|sp|B4L1Z2.1|RTEL1_DROMO RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|193908846|gb|EDW07713.1| GI15901 [Drosophila mojavensis]
Length = 1014
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 7/75 (9%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY--- 74
+A +P FPF + Y++Q FM+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYEVQRAFMEKVIMCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTR 63
Query: 75 -SDHKIAGLEKIEAE 88
S+H+I ++K++ E
Sbjct: 64 QSEHQI-NMQKLQME 77
>gi|206558290|sp|A6ZWN8.1|CHL1_YEAS7 RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|151942784|gb|EDN61130.1| DEAH box protein [Saccharomyces cerevisiae YJM789]
Length = 861
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
E F P+ YDIQ M+ +Y L + K I ESPTGTGK+LSLIC + W +K
Sbjct: 5 EYSETFYHPYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNK 64
Query: 79 IAGLEKIEAEIKDLEISKNETVSE---DWI 105
++E IK E +E +S+ DW+
Sbjct: 65 ADIFTRMETNIKTNE-DDSENLSDDEPDWV 93
>gi|349581808|dbj|GAA26965.1| K7_Chl1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 861
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
E F P+ YDIQ M+ +Y L + K I ESPTGTGK+LSLIC + W +K
Sbjct: 5 EYSETFYHPYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNK 64
Query: 79 IAGLEKIEAEIKDLEISKNETVSE---DWI 105
++E IK E +E +S+ DW+
Sbjct: 65 ADIFTRMETNIKTNE-DDSENLSDDEPDWV 93
>gi|207340439|gb|EDZ68787.1| YPL008Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270082|gb|EEU05324.1| Chl1p [Saccharomyces cerevisiae JAY291]
gi|259150146|emb|CAY86949.1| Chl1p [Saccharomyces cerevisiae EC1118]
Length = 861
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
E F P+ YDIQ M+ +Y L + K I ESPTGTGK+LSLIC + W +K
Sbjct: 5 EYSETFYHPYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNK 64
Query: 79 IAGLEKIEAEIKDLEISKNETVSE---DWI 105
++E IK E +E +S+ DW+
Sbjct: 65 ADIFTRMETNIKTNE-DDSENLSDDEPDWV 93
>gi|190407937|gb|EDV11202.1| deah box protein [Saccharomyces cerevisiae RM11-1a]
Length = 861
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
E F P+ YDIQ M+ +Y L + K I ESPTGTGK+LSLIC + W +K
Sbjct: 5 EYSETFYHPYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNK 64
Query: 79 IAGLEKIEAEIKDLEISKNETVSE---DWI 105
++E IK E +E +S+ DW+
Sbjct: 65 ADIFTRMETNIKTNE-DDSENLSDDEPDWV 93
>gi|6325249|ref|NP_015317.1| Chl1p [Saccharomyces cerevisiae S288c]
gi|116351|sp|P22516.1|CHL1_YEAST RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1; AltName: Full=Chromosome
transmission fidelity protein 1
gi|3538|emb|CAA39922.1| CHL1 [Saccharomyces cerevisiae]
gi|683782|emb|CAA88378.1| Chl1p [Saccharomyces cerevisiae]
gi|965085|gb|AAB68097.1| Chl1p: kinetochore protein in the DEAH box family [Saccharomyces
cerevisiae]
gi|1314068|emb|CAA95033.1| Chl1p [Saccharomyces cerevisiae]
gi|285815528|tpg|DAA11420.1| TPA: Chl1p [Saccharomyces cerevisiae S288c]
gi|392296003|gb|EIW07106.1| Chl1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 861
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
E F P+ YDIQ M+ +Y L + K I ESPTGTGK+LSLIC + W +K
Sbjct: 5 EYSETFYHPYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNK 64
Query: 79 IAGLEKIEAEIKDLEISKNETVSE---DWI 105
++E IK E +E +S+ DW+
Sbjct: 65 ADIFTRMETNIKTNE-DDSENLSDDEPDWV 93
>gi|403215508|emb|CCK70007.1| hypothetical protein KNAG_0D02580 [Kazachstania naganishii CBS
8797]
Length = 832
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNS----------KFGIFESPTGTGKSLSLICGILKWY 74
F PF+ YDIQ M+ +Y L ++ K GI ESPTGTGK+LSLIC L W
Sbjct: 5 FHHPFEPYDIQVELMQCIYDVLSSTASTNANVQRKKIGILESPTGTGKTLSLICASLSWL 64
Query: 75 SDHKIAGL 82
D+K+ L
Sbjct: 65 RDNKLKLL 72
>gi|402080753|gb|EJT75898.1| DEAD_2 domain-containing protein [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 936
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYSDHKIA- 80
+F PF YD+Q FM +Y L + + + ESPTGTGKSLSLIC + W HK A
Sbjct: 19 DFNHPFTPYDVQLEFMSTVYSVLQQGDGQVAVLESPTGTGKSLSLICACMTWLRRHKRAR 78
Query: 81 ---GLEKIEAEIKDLEISKNETVSEDWIEQQ 108
L ++KD DW+ +Q
Sbjct: 79 FDLSLGDAATQLKD---------EPDWVVEQ 100
>gi|365985379|ref|XP_003669522.1| hypothetical protein NDAI_0C06200 [Naumovozyma dairenensis CBS
421]
gi|343768290|emb|CCD24279.1| hypothetical protein NDAI_0C06200 [Naumovozyma dairenensis CBS
421]
Length = 851
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLD-NSKFGIFESPTGTGKSLSLICGILKWYSDHK--- 78
++F P+ YDIQ MK +Y L+ + K I ESPTGTGK+LSLIC + W ++K
Sbjct: 13 NKFHHPYKPYDIQLQLMKCVYDVLNEDKKIAILESPTGTGKTLSLICATITWLRENKADY 72
Query: 79 IAGLEK 84
+AG+ K
Sbjct: 73 LAGISK 78
>gi|170034957|ref|XP_001845338.1| fanconi anemia group J protein [Culex quinquefasciatus]
gi|229891619|sp|B0W9F4.1|RTEL1_CULQU RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|167876796|gb|EDS40179.1| fanconi anemia group J protein [Culex quinquefasciatus]
Length = 978
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
FPF+ Y +Q ++M + L NS G+ ESPTGTGK+LSL+C L W HK A ++
Sbjct: 13 FPFEPYQVQRDYMARVIECLQNSSNGVLESPTGTGKTLSLLCSSLAWIL-HKKAQVQ 68
>gi|313217856|emb|CBY41257.1| unnamed protein product [Oikopleura dioica]
Length = 103
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKDLEISKNE 98
MK +Y +++ K GIFESPTGTGKSLS+IC +KW DH+ + + + ++ K E
Sbjct: 1 MKAIYTAIEDRKIGIFESPTGTGKSLSIICSAIKWLKDHR----NRAQLVTQQPKVDKEE 56
Query: 99 TVSEDWI 105
DW+
Sbjct: 57 DGELDWL 63
>gi|206558225|sp|A5DNW6.2|CHL1_PICGU RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|190348421|gb|EDK40869.2| hypothetical protein PGUG_04967 [Meyerozyma guilliermondii ATCC
6260]
Length = 825
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYSDHK 78
+ P+ YDIQ M +Y T+ N K G+FESPTGTGK+LS+IC + W ++K
Sbjct: 10 YNHPYKPYDIQVQLMDAIYDTIQNKYKVGLFESPTGTGKTLSIICSSMTWLRNYK 64
>gi|326430720|gb|EGD76290.1| hypothetical protein PTSG_00993 [Salpingoeca sp. ATCC 50818]
Length = 871
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 32 YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKD 91
YDIQ + M+ LY + G+F+SPTGTGKSLS++C ++W D L++ E ++ D
Sbjct: 26 YDIQRDMMRQLYCCFEAGGLGVFQSPTGTGKSLSVLCSAMQWLRDD----LQQTEKDLLD 81
Query: 92 LEISK 96
+S+
Sbjct: 82 QNVSE 86
>gi|146414083|ref|XP_001483012.1| hypothetical protein PGUG_04967 [Meyerozyma guilliermondii ATCC
6260]
Length = 825
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYSDHK 78
+ P+ YDIQ M +Y T+ N K G+FESPTGTGK+LS+IC + W ++K
Sbjct: 10 YNHPYKPYDIQVQLMDAIYDTIQNKYKVGLFESPTGTGKTLSIICSSMTWLRNYK 64
>gi|145525869|ref|XP_001448751.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416306|emb|CAK81354.1| unnamed protein product [Paramecium tetraurelia]
Length = 913
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+E FP YD+Q +M+++ LD G+ ESPTGTGK+LSL+C + W H+
Sbjct: 42 TEIYFPHKPYDVQVKYMESVVQILDKKCNGLLESPTGTGKTLSLLCSTMGWLHKHR 97
>gi|195049134|ref|XP_001992658.1| GH24089 [Drosophila grimshawi]
gi|229891623|sp|B4JNS2.1|RTEL1_DROGR RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|193893499|gb|EDV92365.1| GH24089 [Drosophila grimshawi]
Length = 986
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + YD+Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYDVQRAYMEKVIICLRDGTNGVLESPTGTGKTLSLLCSTLGW 59
>gi|340052773|emb|CCC47058.1| putative helicase [Trypanosoma vivax Y486]
Length = 968
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FPFD Y Q +M+ + LDN+ + ESPTGTGK+L L+C +L W
Sbjct: 10 EISFPFDPYPAQVEYMQAVMDALDNAANALLESPTGTGKTLCLLCAVLAW 59
>gi|347964194|ref|XP_311162.5| AGAP000634-PA [Anopheles gambiae str. PEST]
gi|387912925|sp|Q7QEI1.5|RTEL1_ANOGA RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|333467418|gb|EAA06834.5| AGAP000634-PA [Anopheles gambiae str. PEST]
Length = 991
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y++Q N+M + L N G+ ESPTGTGK+LSL+C + W
Sbjct: 13 FPFEPYELQKNYMAKVIECLQNKTNGVLESPTGTGKTLSLLCSSMAW 59
>gi|47224139|emb|CAG13059.1| unnamed protein product [Tetraodon nigroviridis]
Length = 662
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/38 (63%), Positives = 28/38 (73%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
+EFPFP+ YDIQ FM+ LY +D K GIFESPTGT
Sbjct: 6 TEFPFPYQPYDIQQQFMQALYSAVDQGKVGIFESPTGT 43
>gi|313233484|emb|CBY09656.1| unnamed protein product [Oikopleura dioica]
Length = 675
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
MK +Y +++ K GIFESPTGTGKSLS+IC +KW DH+
Sbjct: 1 MKAIYTAIEDRKIGIFESPTGTGKSLSIICSAIKWLKDHR 40
>gi|321469304|gb|EFX80285.1| hypothetical protein DAPPUDRAFT_128417 [Daphnia pulex]
Length = 892
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
L VP EFPF YD+Q FM+ + L G+ ESPTGTGK+L L+C L W +
Sbjct: 6 LNNVPIEFPF--QPYDVQEKFMERVIECLQKGVNGLLESPTGTGKTLCLLCSTLGWLATR 63
Query: 78 K 78
K
Sbjct: 64 K 64
>gi|17506821|ref|NP_492769.1| Protein RTEL-1 [Caenorhabditis elegans]
gi|75018688|sp|Q93575.3|RTEL1_CAEEL RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|3876338|emb|CAB02102.1| Protein RTEL-1 [Caenorhabditis elegans]
Length = 994
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
FPF+ Y+ Q FMKN+ LD ESPTGTGK+LSL+C L W K
Sbjct: 21 FPFEPYECQRIFMKNVVDVLDRKLDAALESPTGTGKTLSLLCSTLAWVQRQK 72
>gi|195448955|ref|XP_002071885.1| GK24923 [Drosophila willistoni]
gi|229891630|sp|B4NDG5.1|RTEL1_DROWI RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194167970|gb|EDW82871.1| GK24923 [Drosophila willistoni]
Length = 998
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
+A +P FPF + Y++Q FM+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYEVQRAFMEKVIICLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTR 63
Query: 78 KIAGLEKIEAEIKDLEISKNET 99
+ + + +I+ L+ + N T
Sbjct: 64 Q----SEQQKQIRKLQDAANNT 81
>gi|391338586|ref|XP_003743639.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 homolog [Metaseiulus occidentalis]
Length = 1132
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
FPF+ Y++Q ++M + L G+ ESPTGTGK+LSL+C L W D K A
Sbjct: 31 FPFEPYELQKDYMSAVLECLQKGWNGLLESPTGTGKTLSLLCSSLAWLEDRKAA 84
>gi|156083254|ref|XP_001609111.1| DNA repair helicase (rad3) and DEAD_2 domain containing protein
[Babesia bovis T2Bo]
gi|154796361|gb|EDO05543.1| DNA repair helicase (rad3) and DEAD_2 domain containing protein
[Babesia bovis]
Length = 775
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
F PF+ Y Q M + Y ++ S FG+FESPTG+GK+++++C L W +++I
Sbjct: 9 FSLPFEPYPSQKRLMHDSYRCIEESDFGLFESPTGSGKTIAMLCSALTWLDENRI 63
>gi|410076050|ref|XP_003955607.1| hypothetical protein KAFR_0B01730 [Kazachstania africana CBS
2517]
gi|372462190|emb|CCF56472.1| hypothetical protein KAFR_0B01730 [Kazachstania africana CBS
2517]
Length = 809
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 19 AEVPSEFPFPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYSD 76
+E F PF YDIQ M+ +Y TL + K I ESPTGTGK+LSLIC + W +
Sbjct: 6 SESRGNFNHPFKPYDIQLELMQCIYDTLSDKTKKIAILESPTGTGKTLSLICSTITWLRE 65
Query: 77 HK 78
+K
Sbjct: 66 NK 67
>gi|196008361|ref|XP_002114046.1| hypothetical protein TRIADDRAFT_27892 [Trichoplax adhaerens]
gi|190583065|gb|EDV23136.1| hypothetical protein TRIADDRAFT_27892 [Trichoplax adhaerens]
Length = 702
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FPF+ Y Q ++M N+ L K GI ESPTGTGK+L L+C L W
Sbjct: 10 EVDFPFNPYPCQLDYMTNVIQCLQEGKNGILESPTGTGKTLCLLCACLAW 59
>gi|308499977|ref|XP_003112174.1| hypothetical protein CRE_29819 [Caenorhabditis remanei]
gi|308268655|gb|EFP12608.1| hypothetical protein CRE_29819 [Caenorhabditis remanei]
Length = 385
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
FPF+ Y+ Q FMKN+ LD ESPTGTGK+LSL+C L W K
Sbjct: 23 FPFEPYECQRIFMKNVVDVLDRKLDAALESPTGTGKTLSLLCSTLAWVQKQK 74
>gi|198467617|ref|XP_001354453.2| GA17940 [Drosophila pseudoobscura pseudoobscura]
gi|229891755|sp|Q29FS3.2|RTEL1_DROPS RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|198149329|gb|EAL31506.2| GA17940 [Drosophila pseudoobscura pseudoobscura]
Length = 1009
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y++Q ++M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYNVQRDYMEKVIICLRDGTNGVLESPTGTGKTLSLLCASLAW 59
>gi|195162511|ref|XP_002022098.1| GL14463 [Drosophila persimilis]
gi|229891625|sp|B4GU19.1|RTEL1_DROPE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194103996|gb|EDW26039.1| GL14463 [Drosophila persimilis]
Length = 1009
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y++Q ++M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYNVQRDYMEKVIICLRDGTNGVLESPTGTGKTLSLLCASLAW 59
>gi|241950739|ref|XP_002418092.1| ATP-dependent RNA helicase Chl1, putative [Candida dubliniensis
CD36]
gi|223641431|emb|CAX43392.1| ATP-dependent RNA helicase Chl1, putative [Candida dubliniensis
CD36]
Length = 823
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYSDHK 78
+ P+ YDIQ M +Y T++N K G+FESPTGTGK+LS+IC + W + K
Sbjct: 10 YNHPYTPYDIQIQLMDAIYDTIENGYKIGLFESPTGTGKTLSIICSSMTWLRNFK 64
>gi|367011419|ref|XP_003680210.1| hypothetical protein TDEL_0C01100 [Torulaspora delbrueckii]
gi|359747869|emb|CCE90999.1| hypothetical protein TDEL_0C01100 [Torulaspora delbrueckii]
Length = 815
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLD-NSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
F P++ Y IQ M+ +Y TL K I ESPTGTGK+LSLIC ++ W +K +
Sbjct: 6 FNHPYEPYGIQLELMQCIYDTLSLGKKLAILESPTGTGKTLSLICSVVTWLRQNKADLVA 65
Query: 84 KIEAEIKDLEISKNETVSEDWI 105
+ L S+++ DW+
Sbjct: 66 SGGHNVGGLSGSESDDDEPDWV 87
>gi|414881660|tpg|DAA58791.1| TPA: hypothetical protein ZEAMMB73_410850, partial [Zea mays]
Length = 941
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFDAYD Q +M + +L K + ESPTGTGK+L L+C L W
Sbjct: 13 FPFDAYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAW 59
>gi|238881932|gb|EEQ45570.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 841
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYSDHK 78
+ P+ YDIQ M +Y T++N K G+FESPTGTGK+LS+IC + W K
Sbjct: 10 YNHPYTPYDIQIQLMDAIYNTIENGYKIGLFESPTGTGKTLSIICSSMTWLRTFK 64
>gi|223997568|ref|XP_002288457.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975565|gb|EED93893.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 746
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
FPF YD+Q+ +MK++ L +S + ESPTGTGK+L L+C L W K
Sbjct: 8 FPFRPYDVQTQYMKSVLNALQSSNHALLESPTGTGKTLCLLCSALAWQQGEK 59
>gi|68472519|ref|XP_719578.1| hypothetical protein CaO19.9551 [Candida albicans SC5314]
gi|68472770|ref|XP_719450.1| hypothetical protein CaO19.2000 [Candida albicans SC5314]
gi|74586763|sp|Q5AD67.1|CHL1_CANAL RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|46441268|gb|EAL00566.1| hypothetical protein CaO19.2000 [Candida albicans SC5314]
gi|46441401|gb|EAL00698.1| hypothetical protein CaO19.9551 [Candida albicans SC5314]
Length = 842
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYSDHK 78
+ P+ YDIQ M +Y T++N K G+FESPTGTGK+LS+IC + W K
Sbjct: 10 YNHPYTPYDIQIQLMDAIYNTIENGYKIGLFESPTGTGKTLSIICSSMTWLRTFK 64
>gi|449019202|dbj|BAM82604.1| probable DNA helicase required for mitotic chromosome segregation
CHL1 [Cyanidioschyzon merolae strain 10D]
Length = 1020
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+P Y Q M+ +Y T+D G+FESPTGTGK+LSL+C L W
Sbjct: 159 FPYP-QPYGTQLELMRAVYETIDRGGIGVFESPTGTGKTLSLLCAALTW 206
>gi|242057873|ref|XP_002458082.1| hypothetical protein SORBIDRAFT_03g026670 [Sorghum bicolor]
gi|241930057|gb|EES03202.1| hypothetical protein SORBIDRAFT_03g026670 [Sorghum bicolor]
Length = 759
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFDAYD Q +M + +L K + ESPTGTGK+L L+C L W
Sbjct: 13 FPFDAYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAW 59
>gi|341883785|gb|EGT39720.1| hypothetical protein CAEBREN_25454 [Caenorhabditis brenneri]
Length = 810
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
FPF+ Y+ Q FMKN+ LD+ ESPTGTGK+LSL+C L W + K
Sbjct: 24 FPFEPYECQRIFMKNVIDVLDSKLDAALESPTGTGKTLSLLCSTLAWVNREK 75
>gi|380420358|ref|NP_001244074.1| probable ATP-dependent RNA helicase DDX11 isoform 4 [Homo
sapiens]
gi|29476793|gb|AAH50069.1| DDX11 protein [Homo sapiens]
Length = 880
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKDLE 93
M LY L+ K GIFESPTGTGKSLSLICG L W D + +K E E + LE
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKKREEEARLLE 52
>gi|345490538|ref|XP_001606129.2| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Nasonia vitripennis]
Length = 1111
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y +Q ++MK + L K G+ ESPTGTGK+LSL+C L W
Sbjct: 13 FPFKPYQVQEDYMKKVIECLQEGKNGVLESPTGTGKTLSLLCSSLGW 59
>gi|414881659|tpg|DAA58790.1| TPA: regulator of telomere elongation helicase 1 [Zea mays]
Length = 619
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFDAYD Q +M + +L K + ESPTGTGK+L L+C L W
Sbjct: 13 FPFDAYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAW 59
>gi|332232623|ref|XP_003265503.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 4
[Nomascus leucogenys]
Length = 880
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKDLE 93
M LY L+ K GIFESPTGTGKSLSLICG L W D + +K E E + LE
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKKREEEARLLE 52
>gi|226494081|ref|NP_001152397.1| regulator of telomere elongation helicase 1 [Zea mays]
gi|195655863|gb|ACG47399.1| regulator of telomere elongation helicase 1 [Zea mays]
Length = 619
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFDAYD Q +M + +L K + ESPTGTGK+L L+C L W
Sbjct: 13 FPFDAYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAW 59
>gi|332839865|ref|XP_520821.3| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 4 [Pan
troglodytes]
Length = 880
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK----IEAEIKDLEI 94
M LY L+ K GIFESPTGTGKSLSLICG L W D + E+ IE L
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREEEARLIETGTGSLHD 60
Query: 95 SKNETV 100
K+E++
Sbjct: 61 EKDESL 66
>gi|238013860|gb|ACR37965.1| unknown [Zea mays]
Length = 274
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFDAYD Q +M + +L K + ESPTGTGK+L L+C L W
Sbjct: 13 FPFDAYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAW 59
>gi|389594205|ref|XP_003722349.1| putative helicase [Leishmania major strain Friedlin]
gi|321438847|emb|CBZ12607.1| putative helicase [Leishmania major strain Friedlin]
Length = 953
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYS 75
FPFD Y Q FM+++ L N G+ ESPTGTGK+L L+C L W S
Sbjct: 14 FPFDPYPAQVEFMRSVVKCLQNGFNGLLESPTGTGKTLCLLCSTLGWLS 62
>gi|255084633|ref|XP_002508891.1| predicted protein [Micromonas sp. RCC299]
gi|226524168|gb|ACO70149.1| predicted protein [Micromonas sp. RCC299]
Length = 915
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
M+ LY TL+ G+FESPTGTGK+LS++C L+W DH+
Sbjct: 1 MRGLYRTLERGGIGVFESPTGTGKTLSVLCSALQWLEDHR 40
>gi|119571194|gb|EAW50809.1| hCG1993153, isoform CRA_e [Homo sapiens]
Length = 463
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKDLE 93
M LY L+ K GIFESPTGTGKSLSLICG L W D + +K E E + LE
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKKREEEARLLE 52
>gi|119608987|gb|EAW88581.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like
helicase homolog, S. cerevisiae), isoform CRA_f [Homo
sapiens]
Length = 218
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 27/38 (71%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
M LY L+ K GIFESPTGTGKSLSLICG L W D
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRD 38
>gi|198421637|ref|XP_002120480.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 1008
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
FPF AY++Q ++M + L+ + ESPTGTGK+L L+C L W H
Sbjct: 13 FPFTAYEVQKSYMTKVIQALNTHQNAALESPTGTGKTLCLLCSTLAWRRQH 63
>gi|339239905|ref|XP_003375878.1| DNA repair helicase family protein [Trichinella spiralis]
gi|316975433|gb|EFV58877.1| DNA repair helicase family protein [Trichinella spiralis]
Length = 810
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 49 SKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKDLEISKNETVSEDWIEQ 107
+K GIFESPTGTGKSLSL+CG L W + +E++E +++ ET E+W+E+
Sbjct: 41 NKIGIFESPTGTGKSLSLLCGSLTWLKRRRNNYIEELERTVEEKTKIIKETALENWLEE 99
>gi|119571197|gb|EAW50812.1| hCG1993153, isoform CRA_g [Homo sapiens]
Length = 431
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKDLE 93
M LY L+ K GIFESPTGTGKSLSLICG L W D + +K E E + LE
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKKREEEARLLE 52
>gi|71026164|ref|XP_762768.1| DNA helicase [Theileria parva strain Muguga]
gi|68349720|gb|EAN30485.1| DNA helicase, putative [Theileria parva]
Length = 740
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Query: 38 FMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKDLEISKN 97
FMK+ Y D S FG+FESPTG+GK+LS++C L W +++ + + +I LE S++
Sbjct: 8 FMKDAYRCFDESLFGLFESPTGSGKTLSILCSALTWLKNNRS---KTMMCDI-GLEPSRD 63
Query: 98 ETVSEDWIEQQSF 110
E V E W+ Q S
Sbjct: 64 EEVPE-WVSQASL 75
>gi|24639946|ref|NP_572254.1| CG4078, isoform A [Drosophila melanogaster]
gi|442615242|ref|NP_001259262.1| CG4078, isoform B [Drosophila melanogaster]
gi|75027961|sp|Q9W484.1|RTEL1_DROME RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|7290625|gb|AAF46074.1| CG4078, isoform A [Drosophila melanogaster]
gi|60677863|gb|AAX33438.1| RE31401p [Drosophila melanogaster]
gi|220952186|gb|ACL88636.1| CG4078-PA [synthetic construct]
gi|440216460|gb|AGB95108.1| CG4078, isoform B [Drosophila melanogaster]
Length = 985
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y +Q +M+ + + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>gi|320591639|gb|EFX04078.1| dead domain containing protein [Grosmannia clavigera kw1407]
Length = 911
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLY--YTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+F P+ YD+Q +FM+ +Y + I ESPTGTGKSLSLICG L W
Sbjct: 34 KFHHPYTPYDVQMDFMRAVYDACATGGGQVAILESPTGTGKSLSLICGALTW 85
>gi|402885129|ref|XP_003906018.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8 [Papio anubis]
Length = 845
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKDLE 93
M LY L+ K GIFESPTGTGKSLSLICG L W D + +K E E + LE
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKKREEEARLLE 52
>gi|390361889|ref|XP_003730027.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Strongylocentrotus purpuratus]
Length = 466
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+ FPF+ Y Q ++M+ + L SK G+ ESPTGTGK+L L+C L W
Sbjct: 10 QVEFPFEPYPCQKDYMRKVIQCLQMSKNGVLESPTGTGKTLCLLCSTLAW 59
>gi|365757958|gb|EHM99827.1| Chl1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 861
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
E F P++ YDIQ M+ +Y L + K I ESPTGTGK+LSLIC + W +K
Sbjct: 5 EYSETFYHPYEPYDIQIQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNK 64
Query: 79 IAGLEKIEA 87
+ EA
Sbjct: 65 ADIFTRREA 73
>gi|195420015|ref|XP_002060745.1| GK24076 [Drosophila willistoni]
gi|195441759|ref|XP_002068656.1| GK23573 [Drosophila willistoni]
gi|194156830|gb|EDW71731.1| GK24076 [Drosophila willistoni]
gi|194164741|gb|EDW79642.1| GK23573 [Drosophila willistoni]
Length = 216
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y++Q FM+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYEVQRAFMEKVIICLRDGTNGVLESPTGTGKTLSLLCLSLAW 59
>gi|159487905|ref|XP_001701963.1| predicted protein [Chlamydomonas reinhardtii]
gi|158281182|gb|EDP06938.1| predicted protein [Chlamydomonas reinhardtii]
Length = 54
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P EFPF D Y Q +FM+++ L K + ESPTGTGK+L L+C L W
Sbjct: 1 IAGIPVEFPF--DPYPCQRDFMESVIKALQQGKNALLESPTGTGKTLCLLCSTLAW 54
>gi|76155593|gb|AAX26884.2| SJCHGC09335 protein [Schistosoma japonicum]
Length = 412
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FP+ YD Q +M + +L+ K I ESPTGTGK+L L+C L W
Sbjct: 10 EIDFPYQPYDCQLEYMTKVLLSLNQGKHAILESPTGTGKTLCLLCASLAW 59
>gi|119608986|gb|EAW88580.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like
helicase homolog, S. cerevisiae), isoform CRA_e [Homo
sapiens]
Length = 657
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKDLE 93
M LY L+ K GIFESPTGTGKSLSLICG L W D + +K E E + LE
Sbjct: 1 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKKREEEARLLE 52
>gi|300123500|emb|CBK24772.2| unnamed protein product [Blastocystis hominis]
Length = 280
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 14/69 (20%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL--------- 71
V +FPFP YDIQ ++M+ + ++ N K + ESPTGTGK+LSL+C L
Sbjct: 20 VSVQFPFP--PYDIQKDYMRMVIDSIQNRKNAMLESPTGTGKTLSLLCSALAAIDFRMTS 77
Query: 72 ---KWYSDH 77
K Y+DH
Sbjct: 78 YIPKQYADH 86
>gi|308812971|ref|XP_003083792.1| putative helicase; 55525-51977 (ISS) [Ostreococcus tauri]
gi|116055674|emb|CAL57759.1| putative helicase; 55525-51977 (ISS), partial [Ostreococcus
tauri]
Length = 657
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Query: 24 EFP-FPFDA-YDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYSD 76
+FP FP+ A Y IQ + M+ +Y + K FG+FESPTGTGK+LS++ G L W D
Sbjct: 8 DFPSFPYAAPYGIQKDLMRRVYDACERKKTFGVFESPTGTGKTLSVLIGALSWIDD 63
>gi|268566755|ref|XP_002639805.1| C. briggsae CBR-BCH-1 protein [Caenorhabditis briggsae]
gi|229891627|sp|A8WS58.1|RTEL1_CAEBR RecName: Full=Regulator of telomere elongation helicase 1 homolog
Length = 994
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+ FPF+ Y+ Q FMKN+ LD ESPTGTGK+LSL+C L W
Sbjct: 17 TSIKFPFEPYECQRIFMKNVIDVLDMKLDAALESPTGTGKTLSLLCSTLAW 67
>gi|312379509|gb|EFR25759.1| hypothetical protein AND_08621 [Anopheles darlingi]
Length = 972
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y +Q ++M L L S G+ ESPTGTGK+LS++C L W
Sbjct: 13 FPFEPYQVQRDYMSKLLQCLQQSTNGLLESPTGTGKTLSILCASLAW 59
>gi|392862459|gb|EAS36901.2| ATP-dependent RNA helicase CHL1 [Coccidioides immitis RS]
Length = 908
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 39/101 (38%), Gaps = 47/101 (46%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT------------------------ 60
F P+ YDIQ FM++LY ++ K GIFESPTGT
Sbjct: 8 FYHPYSPYDIQVQFMRSLYTCIEECKVGIFESPTGTVSILTPEGCSMGFFSLRSDAPEEN 67
Query: 61 -----------------------GKSLSLICGILKWYSDHK 78
GKSLSLICG L W DHK
Sbjct: 68 AADPEWDPMFFNQFASIPKEIRQGKSLSLICGSLTWLRDHK 108
>gi|357622566|gb|EHJ73993.1| fanconi anemia group J protein [Danaus plexippus]
Length = 950
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y++Q ++M+ + +L N+ + ESPTGTGK+LSL+C L W
Sbjct: 13 FPFEPYEVQKSYMEKVIESLQNNTNAVLESPTGTGKTLSLLCSSLAW 59
>gi|348685651|gb|EGZ25466.1| hypothetical protein PHYSODRAFT_485995 [Phytophthora sojae]
Length = 1080
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+ +P EFPFP YD Q +M+ + L + + I ESPTGTGK+L L+C L W
Sbjct: 6 ICGIPVEFPFP--PYDSQLVYMEKVLLALTSKQNAILESPTGTGKTLCLLCATLAW 59
>gi|224054204|ref|XP_002298143.1| predicted protein [Populus trichocarpa]
gi|222845401|gb|EEE82948.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+AYD Q +M+ + +L N + ESPTGTGK+L L+C L W
Sbjct: 14 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 60
>gi|302829651|ref|XP_002946392.1| hypothetical protein VOLCADRAFT_30322 [Volvox carteri f.
nagariensis]
gi|300268138|gb|EFJ52319.1| hypothetical protein VOLCADRAFT_30322 [Volvox carteri f.
nagariensis]
Length = 700
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
+A +P EFPF + Y Q N+M+++ L + + ESPTGTGK+L L+C L W
Sbjct: 2 IAGIPVEFPF--EPYACQRNYMESVIKALQEGRNALLESPTGTGKTLCLLCSTLAWRESL 59
Query: 78 KIA 80
K+
Sbjct: 60 KVG 62
>gi|389744669|gb|EIM85851.1| DNA repair helicase [Stereum hirsutum FP-91666 SS1]
Length = 875
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 22 PSEFP-FPF-DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
P FP FP+ + Y+IQ + M++LY ++ K I ESPTGTGK+LSL+ W D+K
Sbjct: 19 PDTFPIFPYPEPYNIQLDLMRHLYAAIEGRKVAIVESPTGTGKTLSLLSATFTWLDDNK 77
>gi|353232615|emb|CCD79969.1| putative regulator of telomere elongation helicase 1 rtel1
[Schistosoma mansoni]
Length = 1165
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FP+ YD Q +M + +L+ K I ESPTGTGK+L L+C L W
Sbjct: 10 EIDFPYQPYDCQFEYMTKVLLSLNEGKHAILESPTGTGKTLCLLCASLAW 59
>gi|345789824|ref|XP_543101.3| PREDICTED: regulator of telomere elongation helicase 1 [Canis
lupus familiaris]
Length = 1689
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF+ Y Q +M + L GI ESPTGTGK+L L+C L W S HKI
Sbjct: 13 FPFEPYKCQEEYMSKVLECLQKRVNGILESPTGTGKTLCLLCSTLAWREHLRDAISAHKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|301111400|ref|XP_002904779.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095109|gb|EEY53161.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1058
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+ +P EFPFP YD Q +M+ + L + + I ESPTGTGK+L L+C L W
Sbjct: 6 ICGIPVEFPFP--PYDSQLIYMEKVLLALTSKQNAILESPTGTGKTLCLLCATLAW 59
>gi|67623207|ref|XP_667886.1| helicase [Cryptosporidium hominis TU502]
gi|54659060|gb|EAL37657.1| helicase, belonging to UvrD family [Cryptosporidium hominis]
Length = 1100
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 26 PFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
PFP+DAY Q N+M+ + Y+L K + ESPTGTGK+L L+ L +
Sbjct: 16 PFPYDAYKCQINYMQKILYSLKYKKHALLESPTGTGKTLCLLASTLAF 63
>gi|452820691|gb|EME27730.1| DNA excision repair protein ERCC-2 [Galdieria sulphuraria]
Length = 777
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A + E FPF Y +Q ++M+ + L S+ + ESPTGTGK+L L+C L W
Sbjct: 2 VAILGVEVAFPFQPYPVQRDYMEKVIQALQTSQHAMLESPTGTGKTLCLLCSTLAW 57
>gi|29841033|gb|AAP06046.1| similar to GenBank Accession Number BC000673 helicase-like
protein NHL in Homo sapiens [Schistosoma japonicum]
Length = 75
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FP+ YD Q +M + +L+ K I ESPTGTGK+L L+C L W
Sbjct: 10 EIDFPYQPYDCQLEYMTKVLLSLNQGKHAILESPTGTGKTLCLLCASLAW 59
>gi|328719600|ref|XP_001948918.2| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Acyrthosiphon pisum]
Length = 946
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
FP++ Y++Q +++ + L N G+ ESPTGTGK+LSL+C L W K A
Sbjct: 13 FPYEPYEVQKRYIEKVLECLQNGHNGVLESPTGTGKTLSLLCSSLAWLLAKKAA 66
>gi|32398845|emb|CAD98555.1| similar to helicase-like protein nhl, possible [Cryptosporidium
parvum]
Length = 1100
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 26 PFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
PFP+DAY Q N+M+ + Y+L K + ESPTGTGK+L L+ L +
Sbjct: 16 PFPYDAYKCQINYMQKILYSLKYKKHALLESPTGTGKTLCLLASTLAF 63
>gi|66475604|ref|XP_627618.1| DNA repair helicase [Cryptosporidium parvum Iowa II]
gi|46229294|gb|EAK90143.1| DNA repair helicase [Cryptosporidium parvum Iowa II]
Length = 1108
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 26 PFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
PFP+DAY Q N+M+ + Y+L K + ESPTGTGK+L L+ L +
Sbjct: 24 PFPYDAYKCQINYMQKILYSLKYKKHALLESPTGTGKTLCLLASTLAF 71
>gi|256075476|ref|XP_002574045.1| regulator of telomere elongation helicase 1 rtel1 [Schistosoma
mansoni]
Length = 1120
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
E FP+ YD Q +M + +L+ K I ESPTGTGK+L L+C L W D + ++
Sbjct: 10 EIDFPYQPYDCQFEYMTKVLLSLNEGKHAILESPTGTGKTLCLLCASLAWL-DKQANSVQ 68
Query: 84 KIEA 87
I A
Sbjct: 69 LISA 72
>gi|194764312|ref|XP_001964274.1| GF20802 [Drosophila ananassae]
gi|229891621|sp|B3MSG8.1|RTEL1_DROAN RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|190619199|gb|EDV34723.1| GF20802 [Drosophila ananassae]
Length = 994
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y +Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYPVQRAYMEKVIQCLKDGTNGVLESPTGTGKTLSLLCSSLAW 59
>gi|195470104|ref|XP_002099973.1| GE16425 [Drosophila yakuba]
gi|229891631|sp|B4PZB4.1|RTEL1_DROYA RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194187497|gb|EDX01081.1| GE16425 [Drosophila yakuba]
Length = 985
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y +Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>gi|449448190|ref|XP_004141849.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Cucumis sativus]
Length = 1054
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFDAYD Q +M+ + +L + ESPTGTGK+L L+C L W
Sbjct: 13 FPFDAYDCQLVYMEKVIQSLQEKCNALLESPTGTGKTLCLLCATLAW 59
>gi|432091451|gb|ELK24533.1| Putative ATP-dependent RNA helicase DDX11-like protein 8 [Myotis
davidii]
Length = 872
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 26/36 (72%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
FPFPF Y IQ +FM LY LD+ K GIFESPTGT
Sbjct: 13 FPFPFTPYSIQKDFMTVLYQVLDDGKIGIFESPTGT 48
>gi|410898938|ref|XP_003962954.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Takifugu rubripes]
Length = 1074
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF YD Q ++M + L G+ ESPTGTGK+L L+C L W
Sbjct: 13 FPFTPYDCQKDYMTKVIECLQKRNNGVLESPTGTGKTLCLLCATLAW 59
>gi|156836024|ref|XP_001642254.1| hypothetical protein Kpol_187p1 [Vanderwaltozyma polyspora DSM
70294]
gi|206557738|sp|A7TTL0.1|CHL1_VANPO RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|156112733|gb|EDO14396.1| hypothetical protein Kpol_187p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 829
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
F P+ Y+IQ M+ +Y L + K I ESPTGTGK+LSL+C + W D+K+ L
Sbjct: 5 FNHPYQPYEIQLQLMQCIYGALSSGKKIAILESPTGTGKTLSLLCSSITWLRDNKLHLLS 64
Query: 84 K 84
+
Sbjct: 65 Q 65
>gi|8886948|gb|AAF80634.1|AC069251_27 F2D10.21 [Arabidopsis thaliana]
Length = 1273
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYSDHK 78
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C +L W ++K
Sbjct: 36 FPYQPYGTQLAFMSRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSVLAWQQNYK 92
>gi|118387755|ref|XP_001026980.1| DNA repair helicase (rad3) [Tetrahymena thermophila]
gi|89308750|gb|EAS06738.1| DNA repair helicase (rad3) [Tetrahymena thermophila SB210]
Length = 1433
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
FPF Y IQ ++M+++ L++ + +SPTGTGK+LSL+C L W + +
Sbjct: 55 FPFKPYQIQEDYMRSIVEALNSKSNALLQSPTGTGKTLSLLCACLGWLRQKRAS 108
>gi|449529467|ref|XP_004171721.1| PREDICTED: regulator of telomere elongation helicase 1-like,
partial [Cucumis sativus]
Length = 695
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFDAYD Q +M+ + +L + ESPTGTGK+L L+C L W
Sbjct: 13 FPFDAYDCQLVYMEKVIQSLQEKCNALLESPTGTGKTLCLLCATLAW 59
>gi|322694417|gb|EFY86247.1| DEAD-2 domain-containing protein [Metarhizium acridum CQMa 102]
Length = 891
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGT-GKSLSLICGILKWYSDHKIA 80
+F P+ Y +Q FM+ +Y LD + GI ESPTGT GKSLSLIC L W + K
Sbjct: 20 DFHHPYTPYAVQEQFMRTVYDILDKGEGQVGILESPTGTKGKSLSLICASLTWLRNFKSN 79
Query: 81 GLE 83
LE
Sbjct: 80 KLE 82
>gi|240254129|ref|NP_173495.5| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
gi|332191893|gb|AEE30014.1| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
Length = 1175
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYSDHK 78
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C +L W ++K
Sbjct: 36 FPYQPYGTQLAFMSRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSVLAWQQNYK 92
>gi|123491434|ref|XP_001325843.1| helicase [Trichomonas vaginalis G3]
gi|121908748|gb|EAY13620.1| helicase, putative [Trichomonas vaginalis G3]
Length = 747
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ Y +Q +M + + D + I ESPTGTGK+LSL+C +L W
Sbjct: 12 FPYKPYPLQETYMSKVIESCDTGNYAILESPTGTGKTLSLLCSVLSW 58
>gi|297850492|ref|XP_002893127.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp.
lyrata]
gi|297338969|gb|EFH69386.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp.
lyrata]
Length = 1171
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYSDHK 78
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C +L W ++K
Sbjct: 36 FPYQPYGTQLAFMSRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSVLAWQQNYK 92
>gi|195396523|ref|XP_002056881.1| GJ16649 [Drosophila virilis]
gi|229891629|sp|B4M891.1|RTEL1_DROVI RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194146648|gb|EDW62367.1| GJ16649 [Drosophila virilis]
Length = 1005
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y++Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 13 FPFEPYEVQRAYMEKVIMCLRDGTNGVLESPTGTGKTLSLLCASLAW 59
>gi|209876510|ref|XP_002139697.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
gi|209555303|gb|EEA05348.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
Length = 812
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDN-SKFGIFESPTGTGKSLSLICGILKWYSDH 77
++F FPF Y IQ F + + N GIFESPTGTGKS+S +C L W + H
Sbjct: 6 NKFGFPFTPYKIQEQFCRKAWDLFSNPGSIGIFESPTGTGKSISALCSALSWINTH 61
>gi|403361814|gb|EJY80616.1| hypothetical protein OXYTRI_21994 [Oxytricha trifallax]
Length = 957
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 31/55 (56%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
E FPF Y Q NFM L +L + ESPTGTGK+LSL+C L W + +
Sbjct: 44 EVMFPFKPYQCQINFMAKLINSLKLGDNALLESPTGTGKTLSLLCASLAWLKNER 98
>gi|156379412|ref|XP_001631451.1| predicted protein [Nematostella vectensis]
gi|156218492|gb|EDO39388.1| predicted protein [Nematostella vectensis]
Length = 1082
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
FPF YD Q +M+ + L K + ESPTGTGK+L L+C L W + +A L+
Sbjct: 11 FPFKPYDCQVAYMEKVIECLQTRKNAVLESPTGTGKTLCLLCATLAWRQSY-VANLQ 66
>gi|145517083|ref|XP_001444430.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411841|emb|CAK77033.1| unnamed protein product [Paramecium tetraurelia]
Length = 905
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 13 KEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILK 72
K+Q L + FP YD+Q ++M+++ L+ + + ESPTGTGK+LSL+C L
Sbjct: 45 KKQASLVLDNTPVYFPHQPYDVQKSYMESVIRALNKKQNALLESPTGTGKTLSLLCASLA 104
Query: 73 WYSDHK 78
W ++
Sbjct: 105 WLKKNR 110
>gi|159472757|ref|XP_001694511.1| ATP-dependent DNA helicase [Chlamydomonas reinhardtii]
gi|158276735|gb|EDP02506.1| ATP-dependent DNA helicase [Chlamydomonas reinhardtii]
Length = 897
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
E FP Y +Q +FM+ + TLD + E+PTG GK+LSL+C L W + K E
Sbjct: 10 EVHFPHQPYGVQLSFMEKMLRTLDEQGNALLEAPTGCGKTLSLLCAALAWQAKRKRELQE 69
Query: 84 KIEAEIK 90
+ A ++
Sbjct: 70 RAAARLR 76
>gi|154341304|ref|XP_001566605.1| putative helicase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063928|emb|CAM40119.1| putative helicase [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 954
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPFD Y Q FM+++ L + G+ ESPTGTGK+L L+C L W
Sbjct: 14 FPFDPYPAQVEFMRSVVECLQHGFNGLLESPTGTGKTLCLLCSTLAW 60
>gi|167999293|ref|XP_001752352.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696747|gb|EDQ83085.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+DAYD Q +M+ + +L + + ESPTGTGK+L L+C L W
Sbjct: 13 FPYDAYDCQLVYMERVISSLQQGRNALLESPTGTGKTLCLLCATLAW 59
>gi|449018745|dbj|BAM82147.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 1142
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 1 MASKTPNEDKEFKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
MAS +P + + +VP EFPF + Y Q +M+++ L + + ESPTGT
Sbjct: 1 MASSSPAPGRTLF----IRQVPVEFPF--EPYPCQVRYMEHVIEALQTGQNALLESPTGT 54
Query: 61 GKSLSLICGILKWYS 75
GK+L L+C L W S
Sbjct: 55 GKTLGLLCAALAWRS 69
>gi|195340550|ref|XP_002036876.1| GM12432 [Drosophila sechellia]
gi|229891628|sp|B4I0K4.1|RTEL1_DROSE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194130992|gb|EDW53035.1| GM12432 [Drosophila sechellia]
Length = 966
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y +Q +M+ + + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 13 FPFEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>gi|224149616|ref|XP_002336837.1| predicted protein [Populus trichocarpa]
gi|222836982|gb|EEE75375.1| predicted protein [Populus trichocarpa]
Length = 339
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYSDHKI 79
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W ++K+
Sbjct: 27 FPYKPYGTQLAFMGRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNYKL 84
>gi|315047356|ref|XP_003173053.1| hypothetical protein MGYG_05640 [Arthroderma gypseum CBS 118893]
gi|311343439|gb|EFR02642.1| hypothetical protein MGYG_05640 [Arthroderma gypseum CBS 118893]
Length = 883
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 24/79 (30%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTG------------------------ 59
+F P+ Y+IQ FM LY +++ GIFESPTG
Sbjct: 4 DFRHPYTPYEIQVQFMDALYGCIEDGGIGIFESPTGESRTQTVSGTASLCTADRRRDGMS 63
Query: 60 TGKSLSLICGILKWYSDHK 78
GKSLS+ICG L W DHK
Sbjct: 64 AGKSLSVICGSLAWLRDHK 82
>gi|401415594|ref|XP_003872292.1| putative helicase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488516|emb|CBZ23762.1| putative helicase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 953
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYS 75
FPFD Y Q FM+++ L + G+ ESPTGTGK+L L+C L W +
Sbjct: 14 FPFDPYPAQVEFMRSVVKCLQHGFNGLLESPTGTGKTLCLLCSTLGWLA 62
>gi|118383994|ref|XP_001025150.1| DNA repair helicase (rad3) [Tetrahymena thermophila]
gi|89306917|gb|EAS04905.1| DNA repair helicase (rad3) [Tetrahymena thermophila SB210]
Length = 1032
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
E FP YD+Q +M+++ L G+ ESPTGTGK+LS++C L W +
Sbjct: 72 EVYFPHKPYDVQVVYMESVIKCLQERTHGLLESPTGTGKTLSMLCACLGWLQQRR 126
>gi|307108093|gb|EFN56334.1| hypothetical protein CHLNCDRAFT_144794 [Chlorella variabilis]
Length = 1763
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FPF+AY Q ++M + L + + ESPTGTGK+L L+C L W
Sbjct: 285 EVEFPFEAYPCQLDYMTKVIQALQEGQHALLESPTGTGKTLCLLCATLAW 334
>gi|334182721|ref|NP_173498.3| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
gi|332191897|gb|AEE30018.1| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
Length = 1144
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYSDHK 78
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C +L W +K
Sbjct: 36 FPYQPYGTQLAFMSRVISTLDRAQRDGHSHALLESPTGTGKSLSLLCSVLAWQKSYK 92
>gi|8886947|gb|AAF80633.1|AC069251_26 F2D10.24 [Arabidopsis thaliana]
Length = 1119
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYSDHK 78
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C +L W +K
Sbjct: 36 FPYQPYGTQLAFMSRVISTLDRAQRDGHSHALLESPTGTGKSLSLLCSVLAWQKSYK 92
>gi|255088938|ref|XP_002506391.1| predicted protein [Micromonas sp. RCC299]
gi|226521663|gb|ACO67649.1| predicted protein [Micromonas sp. RCC299]
Length = 644
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
EV FP+DAYD Q M+ + L + + ESPTGTGK+L L+C L W
Sbjct: 14 EVTYSVDFPYDAYDCQVTMMERVVEALHAGENALLESPTGTGKTLCLLCAALGW 67
>gi|340385001|ref|XP_003390999.1| PREDICTED: regulator of telomere elongation helicase 1-like,
partial [Amphimedon queenslandica]
Length = 466
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M+ + L N+ I ESPTGTGK+LSL+C L W
Sbjct: 19 FPFTPYPCQIEYMEKVIKALQNNTNAILESPTGTGKTLSLLCATLSW 65
>gi|393212456|gb|EJC97956.1| DNA repair helicase [Fomitiporia mediterranea MF3/22]
Length = 863
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 18 LAEVPSEF-PFPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYS 75
L +P EF FP++A Y IQ + M++LY ++ K + ESPTGTGK+LSL+ L W
Sbjct: 6 LLAIPEEFRAFPYNAPYKIQIDLMQHLYEAIERRKLAVVESPTGTGKTLSLLTSSLTWLH 65
Query: 76 DHKIAGLEKIEAEIKDLEISKNETVSEDWIEQQSFE 111
DHK K ++ L S + DW+ Q+ +
Sbjct: 66 DHKD---RKKRITLESLRGSLDSADDPDWVITQTLD 98
>gi|359482607|ref|XP_002279773.2| PREDICTED: regulator of telomere elongation helicase 1-like
[Vitis vinifera]
Length = 1084
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+AYD Q +M+ + +L + ESPTGTGK+L L+C L W
Sbjct: 13 FPFEAYDCQLVYMEKVIQSLQERCNALLESPTGTGKTLCLLCATLAW 59
>gi|328772350|gb|EGF82388.1| hypothetical protein BATDEDRAFT_22849 [Batrachochytrium
dendrobatidis JAM81]
Length = 996
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FPF Y Q+ M + L S+ + ESPTGTGK+L L+C L W S + + E +
Sbjct: 28 FPFQPYPQQNALMTTIINALQKSENALVESPTGTGKTLCLLCSTLAWRSTYMLWRKEAMR 87
Query: 87 AEIKDLEISKNETVSEDWIEQQSF 110
+E ++ +T+ D + Q+F
Sbjct: 88 SE------TERDTLVLDQLSMQAF 105
>gi|414886608|tpg|DAA62622.1| TPA: hypothetical protein ZEAMMB73_124196, partial [Zea mays]
Length = 203
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILK 72
+ VP EFP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L
Sbjct: 34 VGGVPVEFPY--KPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALA 91
Query: 73 W 73
W
Sbjct: 92 W 92
>gi|342180293|emb|CCC89770.1| putative helicase [Trypanosoma congolense IL3000]
Length = 965
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
E FPF Y +Q +M+ + +L + + ESPTGTGK++ L+C L W D
Sbjct: 10 EVAFPFSPYTVQVEYMQAVLRSLKGAHNALLESPTGTGKTMCLLCATLAWLED 62
>gi|363741498|ref|XP_417435.3| PREDICTED: regulator of telomere elongation helicase 1 [Gallus
gallus]
Length = 1220
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y+ Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYECQETYMAKVLECLQTKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|255574578|ref|XP_002528200.1| regulator of telomere elongation helicase 1 rtel1, putative
[Ricinus communis]
gi|223532412|gb|EEF34207.1| regulator of telomere elongation helicase 1 rtel1, putative
[Ricinus communis]
Length = 1049
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP++AYD Q +M+ + +L + + ESPTGTGK+L L+C L W
Sbjct: 13 FPYEAYDCQLVYMEKVIQSLQSRCNALLESPTGTGKTLCLLCATLAW 59
>gi|297850494|ref|XP_002893128.1| hypothetical protein ARALYDRAFT_472311 [Arabidopsis lyrata subsp.
lyrata]
gi|297338970|gb|EFH69387.1| hypothetical protein ARALYDRAFT_472311 [Arabidopsis lyrata subsp.
lyrata]
Length = 1138
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYSDHK 78
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C +L W +K
Sbjct: 36 FPYQPYGTQLAFMSRVISTLDRAQRDGHSHALLESPTGTGKSLSLLCSVLAWQKSYK 92
>gi|340374870|ref|XP_003385960.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Amphimedon queenslandica]
Length = 717
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M+ + L N+ I ESPTGTGK+LSL+C L W
Sbjct: 19 FPFTPYPCQIEYMEKVIKALQNNTNAILESPTGTGKTLSLLCATLSW 65
>gi|326428226|gb|EGD73796.1| hypothetical protein PTSG_05489 [Salpingoeca sp. ATCC 50818]
Length = 1032
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP + YD+Q+ +M +L L+ K + ESPTGTGK+L L+C L W
Sbjct: 14 FPHNPYDLQTAYMNSLIQALNEGKNAMLESPTGTGKTLCLLCASLAW 60
>gi|384253151|gb|EIE26626.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 812
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
E FP +AY+ Q +M+ + L K + ESPTGTGK+L L+C L W K +
Sbjct: 10 EVQFPHEAYECQVTYMERVITALQEGKNALLESPTGTGKTLCLLCATLAWQESLKQGKVT 69
Query: 84 K 84
K
Sbjct: 70 K 70
>gi|330843781|ref|XP_003293824.1| hypothetical protein DICPUDRAFT_5561 [Dictyostelium purpureum]
gi|325075810|gb|EGC29655.1| hypothetical protein DICPUDRAFT_5561 [Dictyostelium purpureum]
Length = 617
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPF Y Q++ M + LDN + + ESPTGTGK+L+L+C L+W+ +
Sbjct: 6 FPFKPYPSQASMMSRILSGLDNKENCLLESPTGTGKTLTLLCSALEWHRE 55
>gi|429854790|gb|ELA29777.1| ATP-dependent RNA helicase chl1 [Colletotrichum gloeosporioides
Nara gc5]
Length = 858
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 9/76 (11%)
Query: 39 MKNLYYTLD--NSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIK-DLEIS 95
MK Y L N + GI ESPTGTGKSLSLIC L W + +I E+ EA +K +++
Sbjct: 1 MKTAYSVLQAGNGQVGILESPTGTGKSLSLICASLTWLRNQRI---EEHEASLKVNMDDF 57
Query: 96 KNETVSEDWIEQQSFE 111
++E DWI +Q
Sbjct: 58 RDEP---DWIVEQMLR 70
>gi|327284022|ref|XP_003226738.1| PREDICTED: regulator of telomere elongation helicase 1-like [Anolis
carolinensis]
Length = 1142
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIA-GLEKI 85
FPF+ Y Q +M + L GI ESPTGTGK+L L+C L W K A +KI
Sbjct: 13 FPFEPYKCQEEYMSRVLECLQKQVNGILESPTGTGKTLCLLCSTLAWQEHFKDAISAQKI 72
Query: 86 EAEIKDLEISKNETVS 101
+ E+ + +S
Sbjct: 73 AQRLGGAELFADRPMS 88
>gi|302756033|ref|XP_002961440.1| hypothetical protein SELMODRAFT_77246 [Selaginella
moellendorffii]
gi|300170099|gb|EFJ36700.1| hypothetical protein SELMODRAFT_77246 [Selaginella
moellendorffii]
Length = 787
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+DAYD Q +M+++ L + + ESPTGTGK+L L+C L W
Sbjct: 14 FPYDAYDCQLVYMESVIAALQKGQNALLESPTGTGKTLCLLCATLAW 60
>gi|5902361|gb|AAD55463.1|AC009322_3 Hypothetical protein [Arabidopsis thaliana]
Length = 912
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+AY Q +M + +L N + ESPTGTGK+L L+C L W
Sbjct: 58 FPFEAYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAW 104
>gi|397465147|ref|XP_003804384.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like, partial [Pan paniscus]
Length = 79
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 25/37 (67%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
FPFPF Y IQ +FM LY L+ K GIFESPTGT
Sbjct: 43 HFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGT 79
>gi|302776424|ref|XP_002971377.1| hypothetical protein SELMODRAFT_94786 [Selaginella
moellendorffii]
gi|300161359|gb|EFJ27975.1| hypothetical protein SELMODRAFT_94786 [Selaginella
moellendorffii]
Length = 792
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+DAYD Q +M+++ L + + ESPTGTGK+L L+C L W
Sbjct: 14 FPYDAYDCQLVYMESVIAALQKGQNALLESPTGTGKTLCLLCATLAW 60
>gi|12324581|gb|AAG52242.1|AC011717_10 hypothetical protein; 30600-24965 [Arabidopsis thaliana]
Length = 959
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+AY Q +M + +L N + ESPTGTGK+L L+C L W
Sbjct: 58 FPFEAYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAW 104
>gi|42563365|ref|NP_178113.3| regulator of telomere elongation helicase 1 [Arabidopsis thaliana]
gi|332198212|gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana]
Length = 1040
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+AY Q +M + +L N + ESPTGTGK+L L+C L W
Sbjct: 58 FPFEAYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAW 104
>gi|194888991|ref|XP_001977003.1| GG18780 [Drosophila erecta]
gi|229891622|sp|B3NSW1.1|RTEL1_DROER RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|190648652|gb|EDV45930.1| GG18780 [Drosophila erecta]
Length = 985
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y +Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 13 FPFEPYPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>gi|221060536|ref|XP_002260913.1| DNA-repair helicase [Plasmodium knowlesi strain H]
gi|193810987|emb|CAQ42885.1| DNA-repair helicase, putative [Plasmodium knowlesi strain H]
Length = 1106
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
E FP++ YD Q N+M ++ L + I ESPTGTGK+L L+C + + D LE
Sbjct: 27 EVYFPYELYDCQYNYMLSVLNALKKKENAILESPTGTGKTLCLLCASISYLVD----VLE 82
Query: 84 KIEAEIKDLEISKN-ETVSEDWIEQQS 109
K A +++ I++N + +S D+ E ++
Sbjct: 83 KKGAFSENINITENKKNISLDFKENEN 109
>gi|403369956|gb|EJY84835.1| Isoform 4 of Regulator of telomere elongation helicase 1 [Oxytricha
trifallax]
Length = 1415
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +FM + L+ ++ + ESPTGTGK+LSL+C L W
Sbjct: 289 FPFKPYSCQVDFMSKVIKGLNQNENALLESPTGTGKTLSLLCASLAW 335
>gi|336466792|gb|EGO54956.1| hypothetical protein NEUTE1DRAFT_147626 [Neurospora tetrasperma
FGSC 2508]
gi|350288617|gb|EGZ69853.1| DNA repair helicase [Neurospora tetrasperma FGSC 2509]
Length = 1068
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 48 NSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKDLEISKNETVSEDWIEQ 107
+++ +FESPTGTGKSLSLICG L W +HK + EAEI+ ++ + +W+ +
Sbjct: 147 HAQIALFESPTGTGKSLSLICGSLTWLRNHKRL---QFEAEIEKIQQQMEASGEPEWMVE 203
Query: 108 QSFE 111
+ +
Sbjct: 204 SAIK 207
>gi|297842871|ref|XP_002889317.1| hypothetical protein ARALYDRAFT_477264 [Arabidopsis lyrata subsp.
lyrata]
gi|297335158|gb|EFH65576.1| hypothetical protein ARALYDRAFT_477264 [Arabidopsis lyrata subsp.
lyrata]
Length = 1016
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+AY Q +M + +L N + ESPTGTGK+L L+C L W
Sbjct: 45 FPFEAYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAW 91
>gi|71029556|ref|XP_764421.1| DNA repair helicase [Theileria parva strain Muguga]
gi|68351375|gb|EAN32138.1| DNA repair helicase, putative [Theileria parva]
Length = 962
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
E FPF Y Q ++M+N+ T+ SK + ESPTGTGK+LSL+C +
Sbjct: 15 EVKFPFHPYRCQRSYMENVIKTIKESKNALLESPTGTGKTLSLLCSTI 62
>gi|300706292|ref|XP_002995425.1| hypothetical protein NCER_101677 [Nosema ceranae BRL01]
gi|239604524|gb|EEQ81754.1| hypothetical protein NCER_101677 [Nosema ceranae BRL01]
Length = 600
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 30 DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
D YDIQ F+ + +DNS GIF SPTGTGK+LSL+ +L++ ++
Sbjct: 5 DLYDIQKKFITDCKKVIDNSSVGIFSSPTGTGKTLSLLLSVLEYITE 51
>gi|348533666|ref|XP_003454326.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Oreochromis niloticus]
Length = 1193
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
FPF Y+ Q +M + L G+ ESPTGTGK+L L+C L W + K
Sbjct: 13 FPFSPYECQKAYMNKVIECLQKKVNGVLESPTGTGKTLCLLCATLAWRENFK 64
>gi|345325239|ref|XP_001508332.2| PREDICTED: regulator of telomere elongation helicase 1
[Ornithorhynchus anatinus]
Length = 1585
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q ++M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEDYMAKVLECLQKKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|260789809|ref|XP_002589937.1| hypothetical protein BRAFLDRAFT_231064 [Branchiostoma floridae]
gi|229275123|gb|EEN45948.1| hypothetical protein BRAFLDRAFT_231064 [Branchiostoma floridae]
Length = 823
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FPF+ Y Q ++M+ + L G+ ESPTGTGK+L L+C L W S A + K++
Sbjct: 13 FPFEPYACQRSYMEKVIQCLQEGTNGVLESPTGTGKTLCLLCATLAWRS----AYVAKMQ 68
Query: 87 AEIKDLEISKNE 98
E + +K+E
Sbjct: 69 FEGLKQQFTKDE 80
>gi|67525973|ref|XP_661048.1| hypothetical protein AN3444.2 [Aspergillus nidulans FGSC A4]
gi|40743798|gb|EAA62984.1| hypothetical protein AN3444.2 [Aspergillus nidulans FGSC A4]
Length = 994
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
P F P+ YDIQ FM++LY L+ K IFESPTG+G L +I
Sbjct: 14 PQTFNHPYTPYDIQVRFMQSLYECLEEGKVAIFESPTGSGPRLQII 59
>gi|398019061|ref|XP_003862695.1| helicase, putative [Leishmania donovani]
gi|322500925|emb|CBZ36002.1| helicase, putative [Leishmania donovani]
Length = 953
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYS 75
FPF+ Y Q FM+++ L + G+ ESPTGTGK+L L+C L W +
Sbjct: 14 FPFEPYPAQVEFMRSVVKCLQHGFNGLLESPTGTGKTLCLLCSTLGWLA 62
>gi|146093363|ref|XP_001466793.1| putative helicase [Leishmania infantum JPCM5]
gi|134071156|emb|CAM69841.1| putative helicase [Leishmania infantum JPCM5]
Length = 953
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYS 75
FPF+ Y Q FM+++ L + G+ ESPTGTGK+L L+C L W +
Sbjct: 14 FPFEPYPAQVEFMRSVVKCLQHGFNGLLESPTGTGKTLCLLCSTLGWLA 62
>gi|259485564|tpe|CBF82692.1| TPA: DNA helicase, putative (AFU_orthologue; AFUA_3G05590)
[Aspergillus nidulans FGSC A4]
Length = 841
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
P F P+ YDIQ FM++LY L+ K IFESPTG+G L +I
Sbjct: 14 PQTFNHPYTPYDIQVRFMQSLYECLEEGKVAIFESPTGSGPRLQII 59
>gi|403223632|dbj|BAM41762.1| helicase [Theileria orientalis strain Shintoku]
Length = 954
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY---SDHKIA 80
+ FP++ Y++Q +FM+++ + + K + ESPTGTGK+LSLIC L +KI
Sbjct: 15 DVKFPYEPYELQKSFMESVIKAIKDGKNALLESPTGTGKTLSLICASLACILSNKTNKIL 74
Query: 81 GLEKIEAEIK 90
G + +E E K
Sbjct: 75 GGKTLEEEKK 84
>gi|110741966|dbj|BAE98923.1| hypothetical protein [Arabidopsis thaliana]
Length = 652
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+AY Q +M + +L N + ESPTGTGK+L L+C L W
Sbjct: 13 FPFEAYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAW 59
>gi|432960238|ref|XP_004086424.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Oryzias latipes]
Length = 1167
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF YD Q ++M + L G+ ESPTGTGK+L L+C L W
Sbjct: 13 FPFPPYDCQKDYMAKVLQCLQQKVNGVLESPTGTGKTLCLLCATLAW 59
>gi|156102350|ref|XP_001616868.1| DNA repair helicase [Plasmodium vivax Sal-1]
gi|148805742|gb|EDL47141.1| DNA repair helicase, putative [Plasmodium vivax]
Length = 1103
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
E FP++ YD Q N+M ++ L + I ESPTGTGK+L L+C + + D LE
Sbjct: 27 EVYFPYELYDCQYNYMLSVLNALKRKENAILESPTGTGKTLCLLCASISYLVD----VLE 82
Query: 84 KIEAEIKDLEISKN-ETVSEDWIEQQS 109
K A +++ I++N + +S D+ E ++
Sbjct: 83 KKGAFSENINITENKKNISFDFKENEN 109
>gi|66807703|ref|XP_637574.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
gi|60465999|gb|EAL64066.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
Length = 1078
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
FPF Y Q++ M + LD+ + I ESPTGTGK+LSL+C L W ++K
Sbjct: 200 FPFKPYACQASMMSRILEGLDSKENCILESPTGTGKTLSLLCSSLAWQEENK 251
>gi|380006443|gb|AFD29612.1| RTEL1 [Schmidtea mediterranea]
Length = 1057
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
FPF+ Y Q +M+ + +L + K I ESPTGTGK+L L+C L W DH
Sbjct: 13 FPFEPYACQIIYMEKVIESLKDGKNAILESPTGTGKTLCLLCAALAW-QDH 62
>gi|449486421|ref|XP_002193824.2| PREDICTED: regulator of telomere elongation helicase 1 [Taeniopygia
guttata]
Length = 1107
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK-IAGLEKI 85
FPF Y Q +M + L GI ESPTGTGK+L L+C L W K KI
Sbjct: 13 FPFQPYPCQEAYMAKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWREHFKDTISARKI 72
Query: 86 EAEIKDLEISKNETVS 101
+ +E+ + VS
Sbjct: 73 AQRMNGVELFPDRPVS 88
>gi|297481774|ref|XP_002692293.1| PREDICTED: regulator of telomere elongation helicase 1 [Bos taurus]
gi|296481261|tpg|DAA23376.1| TPA: regulator of telomere length-like [Bos taurus]
Length = 151
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FPF Y Q +M + L GI ESPTGTGK+L L+C L W + A +
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWREHLRDAVSARRI 72
Query: 87 AEIKDLEISKNETVS 101
AE E+ + T++
Sbjct: 73 AERASGELFPDRTLA 87
>gi|440491198|gb|ELQ73865.1| Helicase of the DEAD superfamily, partial [Trachipleistophora
hominis]
Length = 867
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
FPF Y Q + L N K GI ESPTGTGKS++++C +L W++ ++
Sbjct: 16 FPFKPYPAQILTCSKIIDCLKNKKTGIIESPTGTGKSIAILCAVLAWHATNR 67
>gi|229891620|sp|P0C928.1|RTEL1_DANRE RecName: Full=Regulator of telomere elongation helicase 1
Length = 1177
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
FPF Y Q ++M + L G+ ESPTGTGK+L L+C L W DH
Sbjct: 13 FPFTPYPCQEDYMSKVIECLQKKVNGVLESPTGTGKTLCLLCSTLAW-RDH 62
>gi|395506651|ref|XP_003757644.1| PREDICTED: regulator of telomere elongation helicase 1
[Sarcophilus harrisii]
Length = 1361
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q ++M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEDYMAKVLECLQKKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|302129716|ref|NP_001013328.2| regulator of telomere elongation helicase 1 [Danio rerio]
Length = 1177
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
FPF Y Q ++M + L G+ ESPTGTGK+L L+C L W DH
Sbjct: 13 FPFTPYPCQEDYMSKVIECLQKKVNGVLESPTGTGKTLCLLCSTLAW-RDH 62
>gi|397614354|gb|EJK62748.1| hypothetical protein THAOC_16627, partial [Thalassiosira
oceanica]
Length = 1353
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y++Q +M ++ L S+ + ESPTGTGK+L L+C L W
Sbjct: 52 FPFQPYNVQHQYMSSVITALQASQHALLESPTGTGKTLCLLCSALAW 98
>gi|297743289|emb|CBI36156.3| unnamed protein product [Vitis vinifera]
Length = 777
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+AYD Q +M+ + +L + ESPTGTGK+L L+C L W
Sbjct: 13 FPFEAYDCQLVYMEKVIQSLQERCNALLESPTGTGKTLCLLCATLAW 59
>gi|449664763|ref|XP_002167953.2| PREDICTED: regulator of telomere elongation helicase 1-like
[Hydra magnipapillata]
Length = 1225
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y+ Q +M+ + L G+ ESPTGTGK+L L+C L W
Sbjct: 13 FPFEPYECQIKYMEKVITCLQKGLNGLLESPTGTGKTLCLLCATLGW 59
>gi|334312296|ref|XP_001375942.2| PREDICTED: regulator of telomere elongation helicase 1 [Monodelphis
domestica]
Length = 1605
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK-IAGLEKI 85
FPF Y Q ++M + L G+ ESPTGTGK+L L+C L W K KI
Sbjct: 13 FPFQPYKCQEDYMTKVLECLQKKVNGVLESPTGTGKTLCLLCTTLAWREHFKDTITARKI 72
Query: 86 EAEIKDLEISKNETVS 101
++ +E+ + +S
Sbjct: 73 AERMQGVELFPDRPMS 88
>gi|357159919|ref|XP_003578599.1| PREDICTED: uncharacterized protein LOC100829852 [Brachypodium
distachyon]
Length = 1225
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKW 73
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W
Sbjct: 39 FPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAW 90
>gi|431894622|gb|ELK04422.1| Regulator of telomere elongation helicase 1 [Pteropus alecto]
Length = 1198
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L G+ ESPTGTGK+L L+C L W S HKI
Sbjct: 13 FPFQPYKCQEEYMAKVLECLQKKVNGVLESPTGTGKTLCLLCTTLAWREHLRDALSAHKI 72
Query: 80 AGLEKIEAEI 89
A E+ + E+
Sbjct: 73 A--ERAQGEL 80
>gi|209878272|ref|XP_002140577.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
gi|209556183|gb|EEA06228.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
Length = 1091
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FP+ AYD Q +M+ + Y+L + K + ESPTGTGK++ L+ L + D
Sbjct: 17 FPYKAYDCQITYMEKVLYSLKHRKHALLESPTGTGKTMCLLASTLAFQRD 66
>gi|449274178|gb|EMC83461.1| Regulator of telomere elongation helicase 1, partial [Columba
livia]
Length = 1124
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK-IAGLEKI 85
FPF Y Q +M + L GI ESPTGTGK+L L+C L W K KI
Sbjct: 13 FPFQPYPCQEAYMAKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWREHFKDTISARKI 72
Query: 86 EAEIKDLEI 94
+ +E+
Sbjct: 73 AQRMNGMEL 81
>gi|357454989|ref|XP_003597775.1| Regulator of telomere elongation helicase [Medicago truncatula]
gi|355486823|gb|AES68026.1| Regulator of telomere elongation helicase [Medicago truncatula]
Length = 1048
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP++AYD Q +M + +L + ESPTGTGK+L L+C L W
Sbjct: 13 FPYEAYDSQLVYMDKVMQSLQEESNALLESPTGTGKTLCLLCATLAW 59
>gi|357455003|ref|XP_003597782.1| Regulator of telomere elongation helicase [Medicago truncatula]
gi|355486830|gb|AES68033.1| Regulator of telomere elongation helicase [Medicago truncatula]
Length = 1089
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP++AYD Q +M + +L + ESPTGTGK+L L+C L W
Sbjct: 54 FPYEAYDSQLVYMDKVMQSLQEESNALLESPTGTGKTLCLLCATLAW 100
>gi|147865346|emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]
Length = 1261
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYSDHK 78
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W +++
Sbjct: 23 FPYQPYGSQLAFMGRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSALAWQKNYR 79
>gi|348554129|ref|XP_003462878.1| PREDICTED: regulator of telomere elongation helicase 1-like [Cavia
porcellus]
Length = 1250
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYHCQQEYMSKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDTISARKI 72
Query: 80 AGLEKIEAEI---KDLEISKNETVSE 102
A E+++ E+ +DL N T ++
Sbjct: 73 A--ERVQGELFLNQDLSSWGNATAAD 96
>gi|389585879|dbj|GAB68609.1| DNA repair helicase, partial [Plasmodium cynomolgi strain B]
Length = 1101
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
E FP++ YD Q N+M ++ L + I ESPTGTGK+L L+C + + D +E
Sbjct: 27 EVYFPYELYDCQYNYMLSVLNALKKKENAILESPTGTGKTLCLLCASISYLVD----VME 82
Query: 84 KIEAEIKDLEISKN-ETVSEDWIEQQS 109
K A +++ I++N + +S D+ E ++
Sbjct: 83 KKGAFSENINITENKKNISFDFKENEN 109
>gi|359491914|ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
Length = 1255
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYSDHK 78
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W +++
Sbjct: 23 FPYQPYGSQLAFMGRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSALAWQKNYR 79
>gi|429965550|gb|ELA47547.1| hypothetical protein VCUG_00978 [Vavraia culicis 'floridensis']
Length = 855
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
FPF Y Q + L N K GI ESPTGTGKS++++C +L W++ ++
Sbjct: 10 FPFKPYPAQILTCSKIIDCLKNKKTGIIESPTGTGKSIAILCAVLAWHAHNR 61
>gi|340717629|ref|XP_003397282.1| PREDICTED: Fanconi anemia group J protein homolog [Bombus
terrestris]
Length = 976
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGL--EK 84
P Y Q M L + + ESPTG+GK+L+L+CG+L W+ DH +A + +K
Sbjct: 212 LPVKPYSCQVAVMNQLIQGCIKQENCLLESPTGSGKTLALLCGVLAWH-DHHVAEVQNQK 270
Query: 85 IEAEIKDLEISKN 97
+E +I++ +IS++
Sbjct: 271 LEKQIQE-DISRD 282
>gi|403282703|ref|XP_003932780.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Saimiri boliviensis boliviensis]
Length = 1604
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF+ Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFEPYKCQQEYMAKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDTISARKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERLQGEL 80
>gi|224061865|ref|XP_002300637.1| predicted protein [Populus trichocarpa]
gi|222842363|gb|EEE79910.1| predicted protein [Populus trichocarpa]
Length = 1183
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYSDHKI 79
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W ++K+
Sbjct: 27 FPYKPYGTQLAFMGRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNYKL 84
>gi|145525952|ref|XP_001448787.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416353|emb|CAK81390.1| unnamed protein product [Paramecium tetraurelia]
Length = 901
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
FP Y++Q +M+++ L+ + + ESPTGTGK+LSL+C L W ++
Sbjct: 59 FPHQPYEVQKAYMESVIQALNMKQNALLESPTGTGKTLSLLCASLAWLKKNR 110
>gi|443694244|gb|ELT95437.1| hypothetical protein CAPTEDRAFT_179377 [Capitella teleta]
Length = 837
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 17 PLAEVPS-EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
PL E FPFD Y Q ++M ++ L + I ESPTGTGK+L L+C L W
Sbjct: 2 PLVEASGVSVNFPFDPYPCQVDYMSSVVSCLKTGQNAILESPTGTGKTLCLLCSSLAW 59
>gi|145474073|ref|XP_001423059.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390119|emb|CAK55661.1| unnamed protein product [Paramecium tetraurelia]
Length = 306
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 14 EQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILK 72
E++ + S++PFP Y Q + K++Y +L +K IFESPTGTGKS +LI G L
Sbjct: 6 EEKIRERIKSQYPFP--PYQSQLDLSKDIYVSLAQGTKVSIFESPTGTGKSYALIEGALN 63
Query: 73 WYSDHKIAGLEKIEAEIK 90
+ D K L K++ + +
Sbjct: 64 YLEDIKSNTLIKVKQKCQ 81
>gi|336369679|gb|EGN98020.1| hypothetical protein SERLA73DRAFT_56211 [Serpula lacrymans var.
lacrymans S7.3]
Length = 859
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 8/96 (8%)
Query: 21 VPSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
VP FP FP++ Y IQ + M+++Y +++N + I ESPTGTGK+LSL+C L W +D K
Sbjct: 12 VPDSFPAFPYNPYPIQIDLMQHVYSSIENRQVAIVESPTGTGKTLSLLCSSLSWLADEK- 70
Query: 80 AGLEKIEAEIKDLEISKNETVSEDWIEQQSFEPTIR 115
E++ K +S+ + DW+ + E R
Sbjct: 71 ---ERVR---KGQLLSQARSDEPDWVAAHTMEKRQR 100
>gi|323454890|gb|EGB10759.1| hypothetical protein AURANDRAFT_62227 [Aureococcus anophagefferens]
Length = 1120
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
+ P EFPF D Y Q +FM +D I ESPTGTGK+L L+ L W H
Sbjct: 119 DTPVEFPF--DPYACQLDFMDKALGAVDAGTSAILESPTGTGKTLCLLVSTLAWAKRHAP 176
Query: 80 AGLEKIE 86
A K +
Sbjct: 177 AQTAKAD 183
>gi|297745566|emb|CBI40731.3| unnamed protein product [Vitis vinifera]
Length = 1218
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYSDHK 78
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W +++
Sbjct: 23 FPYQPYGSQLAFMGRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSALAWQKNYR 79
>gi|126654047|ref|XP_001388395.1| helicase [Cryptosporidium parvum Iowa II]
gi|126117488|gb|EAZ51588.1| helicase, putative [Cryptosporidium parvum Iowa II]
Length = 775
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 24 EFPFPFDAYDIQSNFMKNLY--YTLDNSKFGIFESPTGTGKSLSLICGILKWYS 75
F FP + Y+IQS F + Y +D GIFESPTGTGK+LS++C L W S
Sbjct: 6 RFGFPNEPYEIQSEFCSAAWKLYEIDGG-IGIFESPTGTGKTLSILCSSLSWIS 58
>gi|336382459|gb|EGO23609.1| hypothetical protein SERLADRAFT_349743 [Serpula lacrymans var.
lacrymans S7.9]
Length = 848
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 8/96 (8%)
Query: 21 VPSEFP-FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
VP FP FP++ Y IQ + M+++Y +++N + I ESPTGTGK+LSL+C L W +D K
Sbjct: 12 VPDSFPAFPYNPYPIQIDLMQHVYSSIENRQVAIVESPTGTGKTLSLLCSSLSWLADEK- 70
Query: 80 AGLEKIEAEIKDLEISKNETVSEDWIEQQSFEPTIR 115
E++ K +S+ + DW+ + E R
Sbjct: 71 ---ERVR---KGQLLSQARSDEPDWVAAHTMEKRQR 100
>gi|410953370|ref|XP_003983344.1| PREDICTED: regulator of telomere elongation helicase 1 [Felis
catus]
Length = 1477
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQKKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|384251189|gb|EIE24667.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 827
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
M++LY L G+ ESPTGTGK+LSLIC L+W D A
Sbjct: 1 MQHLYSVLQTGGVGLLESPTGTGKTLSLICSTLQWLEDRNKA 42
>gi|426241833|ref|XP_004014789.1| PREDICTED: regulator of telomere elongation helicase 1 [Ovis
aries]
Length = 1305
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQKKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|441639260|ref|XP_004090200.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Nomascus leucogenys]
Length = 1342
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLRDGISARKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|354497402|ref|XP_003510809.1| PREDICTED: Fanconi anemia group J protein homolog [Cricetulus
griseus]
gi|344242804|gb|EGV98907.1| Fanconi anemia group J protein-like [Cricetulus griseus]
Length = 1166
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 63
>gi|440803958|gb|ELR24841.1| DEAD/H (AspGlu-Ala-Asp/His) box polypeptide 11, putative
[Acanthamoeba castellanii str. Neff]
Length = 1005
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 42 LYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+Y LD GIFESPTGTGKSLS+IC L+W D++
Sbjct: 1 MYAVLDKGGLGIFESPTGTGKSLSIICSALQWLRDNE 37
>gi|432094035|gb|ELK25827.1| Regulator of telomere elongation helicase 1 [Myotis davidii]
Length = 1389
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L G+ ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMAKVLECLQKKVNGVLESPTGTGKTLCLLCSTLAW 59
>gi|84997393|ref|XP_953418.1| helicase [Theileria annulata strain Ankara]
gi|65304414|emb|CAI76793.1| helicase, putative [Theileria annulata]
Length = 951
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
FPF Y Q ++M+++ T+ SK + ESPTGTGK+LSLIC L
Sbjct: 18 FPFYPYRCQRSYMEHVIKTIKESKNALLESPTGTGKTLSLICSTL 62
>gi|255539256|ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
communis]
gi|223551394|gb|EEF52880.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
communis]
Length = 1248
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNS-----KFGIFESPTGTGKSLSLICGILKWYSDHK 78
FP+ Y Q FM + TLD + + ESPTGTGKSLSL+C L W ++K
Sbjct: 28 FPYQPYGPQLAFMGRVISTLDRAVRDGHCHALLESPTGTGKSLSLLCSTLAWQQNYK 84
>gi|89887293|gb|ABD78306.1| regulator of telomere length splice variant isoform 1 [Bos
taurus]
Length = 1082
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|301780626|ref|XP_002925736.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1-like [Ailuropoda melanoleuca]
Length = 1303
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FPF Y Q +M + L GI ESPTGTGK+L L+C L W + A +
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDAVSARKI 72
Query: 87 AEIKDLEISKNETVS 101
AE E+ + T+S
Sbjct: 73 AERAQGELFLDRTLS 87
>gi|164429296|ref|XP_001728521.1| hypothetical protein NCU11409 [Neurospora crassa OR74A]
gi|206557740|sp|A7UXD4.1|CHL1_NEUCR RecName: Full=ATP-dependent RNA helicase chl-1; AltName:
Full=Chromosome loss protein 1
gi|157073424|gb|EDO65430.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1073
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 48 NSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+++ +FESPTGTGKSLSLICG L W +HK
Sbjct: 147 HAQIALFESPTGTGKSLSLICGSLTWLRNHK 177
>gi|109488700|ref|XP_340870.3| PREDICTED: Fanconi anemia group J protein homolog [Rattus
norvegicus]
gi|109491562|ref|XP_001081096.1| PREDICTED: Fanconi anemia group J protein homolog [Rattus
norvegicus]
Length = 1166
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 63
>gi|326667712|ref|XP_002664623.2| PREDICTED: Fanconi anemia group J protein homolog [Danio rerio]
Length = 162
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L+N + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNSIIRGLNNGQHCLLESPTGSGKSLALLCSALAW 63
>gi|89887299|gb|ABD78309.1| regulator of telomere length splice variant isoform 4 [Bos
taurus]
Length = 1121
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|440889948|gb|ELR44730.1| Regulator of telomere elongation helicase 1 [Bos grunniens mutus]
Length = 1264
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|229891626|sp|A4K436.1|RTEL1_BOVIN RecName: Full=Regulator of telomere elongation helicase 1
gi|89887297|gb|ABD78308.1| regulator of telomere length splice variant isoform 3 [Bos
taurus]
Length = 1216
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|148225626|ref|NP_001091044.1| regulator of telomere elongation helicase 1 [Bos taurus]
gi|84105070|gb|ABC54575.1| regulator of telomere length helicase 1 [Bos taurus]
gi|84105072|gb|ABC54576.1| regulator of telomere length helicase 1 [Bos taurus]
Length = 1266
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|297259357|ref|XP_001113864.2| PREDICTED: regulator of telomere elongation helicase 1-like
[Macaca mulatta]
Length = 1347
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLRDTISARKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|26379597|dbj|BAC25422.1| unnamed protein product [Mus musculus]
Length = 87
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSDHKIAGL 82
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W SD+K G+
Sbjct: 17 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAWQQSLSDNKDTGV 75
>gi|124808195|ref|XP_001348254.1| DNA-repair helicase, putative [Plasmodium falciparum 3D7]
gi|23497145|gb|AAN36693.1| DNA-repair helicase, putative [Plasmodium falciparum 3D7]
Length = 1160
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
E FP++ YD Q N+M ++ L + I ESPTGTGK+L L+C + + D
Sbjct: 28 EVYFPYELYDCQYNYMLSVLSALKKRENAILESPTGTGKTLCLLCASISYVVD 80
>gi|89887295|gb|ABD78307.1| regulator of telomere length splice variant isoform 2 [Bos
taurus]
Length = 1237
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|328871465|gb|EGG19835.1| DEAD/DEAH box helicase [Dictyostelium fasciculatum]
Length = 1125
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY------SDHKIA 80
FP++ YD Q+ M + + + + ES TGTGK+LSL+C L+W D I
Sbjct: 119 FPYEPYDTQATMMHRILEACEKGQNALLESATGTGKTLSLLCATLEWQKGKLAERDSNIN 178
Query: 81 GLEKIEAE 88
L + E E
Sbjct: 179 ALARAERE 186
>gi|449674929|ref|XP_002168371.2| PREDICTED: Fanconi anemia group J protein-like [Hydra
magnipapillata]
Length = 181
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK------ 78
FP AY Q + M + ++ + + ESPTG+GKSL+L+C L W + K
Sbjct: 34 VKFPVKAYPTQISLMSKILQSIQKRQCCLLESPTGSGKSLALLCATLAWLYEEKAQKEEE 93
Query: 79 IAGLEKIEAEIKDLEIS 95
+ ++ I E+ +++++
Sbjct: 94 VTNVQGIIKEVSNVQVN 110
>gi|30795235|ref|NP_840094.1| Fanconi anemia group J protein homolog [Mus musculus]
gi|78099253|sp|Q5SXJ3.1|FANCJ_MOUSE RecName: Full=Fanconi anemia group J protein homolog;
Short=Protein FACJ; AltName: Full=ATP-dependent RNA
helicase BRIP1; AltName: Full=BRCA1-associated
C-terminal helicase 1; AltName: Full=BRCA1-interacting
protein C-terminal helicase 1; Short=BRCA1-interacting
protein 1
gi|62740250|gb|AAH94252.1| BRCA1 interacting protein C-terminal helicase 1 [Mus musculus]
Length = 1174
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 63
>gi|148683833|gb|EDL15780.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_b
[Mus musculus]
Length = 1180
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 23 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 69
>gi|390462826|ref|XP_002747823.2| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Callithrix jacchus]
Length = 1823
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFKPYKCQQEYMAKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDTISARKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERLQGEL 80
>gi|296481054|tpg|DAA23169.1| TPA: regulator of telomere elongation helicase 1 [Bos taurus]
Length = 583
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAW 59
>gi|402881970|ref|XP_003904529.1| PREDICTED: regulator of telomere elongation helicase 1 [Papio
anubis]
Length = 1301
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWQEHLRDTISARKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|47212324|emb|CAF91262.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1212
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M+ + L+ G+ ESPTGTGK+L L+C L W
Sbjct: 13 FPFAPYACQREYMRKVIECLEQKTNGVLESPTGTGKTLCLLCSALAW 59
>gi|149053741|gb|EDM05558.1| BRCA1 interacting protein C-terminal helicase 1 (predicted)
[Rattus norvegicus]
Length = 964
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 63
>gi|256091116|ref|XP_002581482.1| regulator of telomere elongation helicase 1 rtel1 [Schistosoma
mansoni]
Length = 61
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
FP Y Q + M + +L+N + + ESPTGTGK+LSL+C L W K
Sbjct: 9 FPHKPYGCQMSMMTRVIESLENKQNCLLESPTGTGKTLSLLCASLGWLEKRK 60
>gi|74203152|dbj|BAE26258.1| unnamed protein product [Mus musculus]
Length = 527
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|390602956|gb|EIN12348.1| DNA repair helicase [Punctularia strigosozonata HHB-11173 SS5]
Length = 868
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 22 PSEF-PFPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
P +F FP+ Y Q MK+LY L++ + I ES T TGK+L L+C L W D +
Sbjct: 8 PDQFEAFPYQPPYPNQQELMKHLYSVLEHRRHTIVESRTSTGKTLVLLCATLSWLLDDRD 67
Query: 80 AGLEKIEAEIKDLEISKNETVSEDWIEQQSFE 111
+ +++ L+I ++ DWI +Q+ E
Sbjct: 68 RAR---QGQLESLKICNSQ--DPDWIVEQTIE 94
>gi|320167785|gb|EFW44684.1| DEAH helicase isoform 6 [Capsaspora owczarzaki ATCC 30864]
Length = 1319
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW----YSDHKIAGL 82
FPF+ YD Q +M+ + L + ESPTGTGK+L L+C L W + H++A L
Sbjct: 16 FPFNPYDCQLVYMEQVIQCLQEGTNALLESPTGTGKTLCLLCAALGWRQAAVAAHQLAKL 75
Query: 83 E 83
+
Sbjct: 76 D 76
>gi|414886609|tpg|DAA62623.1| TPA: hypothetical protein ZEAMMB73_124196, partial [Zea mays]
Length = 631
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKW 73
VP EFP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W
Sbjct: 37 VPVEFPY--KPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAW 92
>gi|431890862|gb|ELK01741.1| Fanconi anemia group J protein [Pteropus alecto]
Length = 1164
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L+N + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNSIVRGLNNKQHCLLESPTGSGKSLALLCSALAW 63
>gi|339240165|ref|XP_003376008.1| fanconi anemia group J protein-like protein [Trichinella
spiralis]
gi|316975301|gb|EFV58747.1| fanconi anemia group J protein-like protein [Trichinella
spiralis]
Length = 822
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%)
Query: 15 QRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
Q LA ++ FPF Y Q M L +S + ESPTGTGKSL+L+C L W
Sbjct: 13 QMNLAVGGADISFPFSPYPSQRAIMDRTLRALKHSNNCLIESPTGTGKSLALLCSALAW 71
>gi|444517021|gb|ELV11342.1| Regulator of telomere elongation helicase 1 [Tupaia chinensis]
Length = 1288
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L G+ ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYKCQEQYMTKVLECLQKKVHGLLESPTGTGKTLCLLCTTLAWREHLRDSISARKI 72
Query: 80 AGLEKIEAEI-KDLEISKNETVSED 103
A E++ E+ D +S V+ D
Sbjct: 73 A--ERVPGELFSDQALSWGNAVAVD 95
>gi|307108452|gb|EFN56692.1| hypothetical protein CHLNCDRAFT_57565 [Chlorella variabilis]
Length = 1523
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY +Q +FM + L+ + E+PTG+GK+LSL+C L W
Sbjct: 13 FPHKAYGVQLSFMNKVIAALEGGHNALLEAPTGSGKTLSLLCSALAW 59
>gi|397477200|ref|XP_003809966.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 2
[Pan paniscus]
Length = 1401
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|351714866|gb|EHB17785.1| Regulator of telomere elongation helicase 1, partial
[Heterocephalus glaber]
Length = 1184
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYQCQQEYMSKVLECLQKKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|82752532|ref|XP_727340.1| DNA repair helicase [Plasmodium yoelii yoelii 17XNL]
gi|23483134|gb|EAA18905.1| DNA repair helicase, putative [Plasmodium yoelii yoelii]
Length = 1069
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FP++ YD Q N+M ++ L + I ESPTGTGK+L L+C + +
Sbjct: 27 EVCFPYELYDCQYNYMLSVLNALKKKENAILESPTGTGKTLCLLCASISY 76
>gi|345805276|ref|XP_852649.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Canis lupus familiaris]
Length = 1247
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
+ FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W +
Sbjct: 14 KITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSTLAWQ--------Q 65
Query: 84 KIEAEIKDLEISKNET 99
+ ++ D +SK E
Sbjct: 66 SVSGKLVDESLSKTEV 81
>gi|374674404|dbj|BAA83040.3| KIAA1088 protein, partial [Homo sapiens]
Length = 1400
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|119595650|gb|EAW75244.1| hCG22751, isoform CRA_e [Homo sapiens]
Length = 1400
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|168269672|dbj|BAG09963.1| tumor necrosis factor receptor superfamily member 6B precursor
[synthetic construct]
Length = 1400
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|7012929|gb|AAF35243.1| helicase-like protein NHL [Homo sapiens]
Length = 1400
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|38707224|gb|AAR27230.1| DEAH helicase isoform 4 [Mus spretus]
Length = 1165
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAISSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|326931537|ref|XP_003211885.1| PREDICTED: Fanconi anemia group J protein homolog [Meleagris
gallopavo]
Length = 1257
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M + L+N + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNAIVKGLNNGQHCLLESPTGSGKSLALLCSALSW 63
>gi|326470360|gb|EGD94369.1| DNA repair helicase (rad3) [Trichophyton tonsurans CBS 112818]
Length = 847
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 10/55 (18%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+F P+ YDIQ+ FM+ LY +++ G GKSLSLICG L W DHK
Sbjct: 4 DFRHPYRPYDIQAQFMEALYGCIED----------GGGKSLSLICGSLAWLRDHK 48
>gi|148675458|gb|EDL07405.1| regulator of telomere elongation helicase 1 [Mus musculus]
Length = 1273
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|262263447|ref|NP_001160139.1| regulator of telomere elongation helicase 1 isoform 4 [Mus
musculus]
gi|219521615|gb|AAI44978.1| Rtel1 protein [Mus musculus]
Length = 1164
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|395829361|ref|XP_003787828.1| PREDICTED: regulator of telomere elongation helicase 1 [Otolemur
garnettii]
Length = 1303
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFRPYRCQQEYMTKVLECLQKRVNGILESPTGTGKTLCLLCTTLAWREHLRDSVSARKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|301608630|ref|XP_002933884.1| PREDICTED: Fanconi anemia group J protein-like [Xenopus (Silurana)
tropicalis]
Length = 1229
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FP AY Q M ++ L+ + + ESPTG+GKSL+L+C L W + G + ++
Sbjct: 17 FPCRAYPSQLAMMNSIMRGLNCKQHCLLESPTGSGKSLALLCSALAW--QQSLYGKQAVD 74
Query: 87 AEIKDLEISKNETVS 101
+ + E +K E V+
Sbjct: 75 EKSNEKECTKMERVT 89
>gi|410055436|ref|XP_003953846.1| PREDICTED: regulator of telomere elongation helicase 1 [Pan
troglodytes]
Length = 1301
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|426392493|ref|XP_004062584.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 3
[Gorilla gorilla gorilla]
Length = 1301
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|119595646|gb|EAW75240.1| hCG22751, isoform CRA_b [Homo sapiens]
gi|119595651|gb|EAW75245.1| hCG22751, isoform CRA_b [Homo sapiens]
Length = 1300
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|301777952|ref|XP_002924394.1| PREDICTED: Fanconi anemia group J protein-like [Ailuropoda
melanoleuca]
gi|281342514|gb|EFB18098.1| hypothetical protein PANDA_013720 [Ailuropoda melanoleuca]
Length = 1249
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+ FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 14 KITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|262263445|ref|NP_001160138.1| regulator of telomere elongation helicase 1 isoform 3 [Mus
musculus]
Length = 1170
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|338711555|ref|XP_001917874.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J
protein-like, partial [Equus caballus]
Length = 1219
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 16 FPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 62
>gi|74271901|ref|NP_001028230.1| Fanconi anemia group J protein homolog [Gallus gallus]
gi|78099252|sp|Q3YK19.1|FANCJ_CHICK RecName: Full=Fanconi anemia group J protein homolog;
Short=Protein FACJ; AltName: Full=ATP-dependent RNA
helicase BRIP1
gi|72199300|gb|AAZ66861.1| BRIP1 [Gallus gallus]
Length = 1252
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FP AY Q M + L+N + + ESPTG+GKSL+L+C L W L K
Sbjct: 17 FPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSALSWQQSLYEKSLLKSS 76
Query: 87 AEIKDLE 93
E +D E
Sbjct: 77 CEKEDRE 83
>gi|38707236|gb|AAR27236.1| DEAH helicase isoform 3 [Mus musculus]
Length = 1164
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|402899850|ref|XP_003912899.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Papio anubis]
Length = 1248
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|262263443|ref|NP_001160137.1| regulator of telomere elongation helicase 1 isoform 2 [Mus
musculus]
gi|229891754|sp|Q0VGM9.2|RTEL1_MOUSE RecName: Full=Regulator of telomere elongation helicase 1
gi|148878220|gb|AAI45659.1| Rtel1 protein [Mus musculus]
gi|219519260|gb|AAI44979.1| Rtel1 protein [Mus musculus]
Length = 1203
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|119595649|gb|EAW75243.1| hCG22751, isoform CRA_d [Homo sapiens]
Length = 1023
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|111493941|gb|AAI05579.1| Rtel1 protein [Mus musculus]
Length = 1203
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|38707238|gb|AAR27237.1| DEAH helicase isoform 5 [Mus musculus]
Length = 1170
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|50726319|dbj|BAD33894.1| putative BRCA1 interacting protein C-terminal helicase 1 [Oryza
sativa Japonica Group]
Length = 1366
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKW 73
VP EFP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W
Sbjct: 30 VPVEFPY--KPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAW 85
>gi|414886610|tpg|DAA62624.1| TPA: hypothetical protein ZEAMMB73_124196 [Zea mays]
Length = 1167
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKW 73
VP EFP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W
Sbjct: 37 VPVEFPY--KPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAW 92
>gi|50510779|dbj|BAD32375.1| mKIAA1088 protein [Mus musculus]
Length = 1211
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 15 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAVSSLKI 74
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 75 A--ERVQGEL 82
>gi|38707234|gb|AAR27235.1| DEAH helicase isoform 2 [Mus musculus]
Length = 1203
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|395845987|ref|XP_003795698.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Otolemur garnettii]
Length = 1234
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|262263441|ref|NP_001001882.3| regulator of telomere elongation helicase 1 isoform 1 [Mus
musculus]
Length = 1209
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|444313385|ref|XP_004177350.1| hypothetical protein TBLA_0A00310 [Tetrapisispora blattae CBS
6284]
gi|387510389|emb|CCH57831.1| hypothetical protein TBLA_0A00310 [Tetrapisispora blattae CBS
6284]
Length = 893
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+ PF YDIQ M LY +L K I ESPTGTGK+LSLIC L + D K
Sbjct: 26 YGHPFHPYDIQLQLMTFLYDSLFLEKKVLIVESPTGTGKTLSLICSTLTYLRDIK 80
>gi|426392491|ref|XP_004062583.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 2
[Gorilla gorilla gorilla]
Length = 1244
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|426392489|ref|XP_004062582.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Gorilla gorilla gorilla]
Length = 1220
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|410219260|gb|JAA06849.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
gi|410263662|gb|JAA19797.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
Length = 1220
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|397477198|ref|XP_003809965.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Pan paniscus]
Length = 1090
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|332858954|ref|XP_003317100.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Pan troglodytes]
gi|410301716|gb|JAA29458.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
gi|410341613|gb|JAA39753.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
Length = 1220
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|114669761|ref|XP_511607.2| PREDICTED: Fanconi anemia group J protein [Pan troglodytes]
gi|410223276|gb|JAA08857.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
gi|410257750|gb|JAA16842.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
gi|410303552|gb|JAA30376.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
gi|410331379|gb|JAA34636.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
Length = 1249
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|38707232|gb|AAR27234.1| DEAH helicase isoform 1 [Mus musculus]
Length = 1209
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|198429884|ref|XP_002120239.1| PREDICTED: similar to BRIP1 [Ciona intestinalis]
Length = 1145
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 14 EQRPLAEV---PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGI 70
E++P E+ + FPF Y Q + M + L S+ + ESPTG+GK+LSL+C
Sbjct: 3 EEKPHVELMIGGVKIHFPFKPYPSQLSMMSMIVKGLQRSEHCLLESPTGSGKTLSLLCSA 62
Query: 71 LKWYSD 76
L W D
Sbjct: 63 LAWQQD 68
>gi|7706541|ref|NP_057518.1| regulator of telomere elongation helicase 1 isoform 1 [Homo
sapiens]
gi|229462743|sp|Q9NZ71.2|RTEL1_HUMAN RecName: Full=Regulator of telomere elongation helicase 1;
AltName: Full=Novel helicase-like
gi|6969265|gb|AAF33687.1|AF217795_1 helicase-like protein NHL [Homo sapiens]
gi|119595644|gb|EAW75238.1| hCG22751, isoform CRA_a [Homo sapiens]
gi|119595645|gb|EAW75239.1| hCG22751, isoform CRA_a [Homo sapiens]
gi|119595647|gb|EAW75241.1| hCG22751, isoform CRA_a [Homo sapiens]
Length = 1219
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|403274761|ref|XP_003929130.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Saimiri boliviensis boliviensis]
Length = 1252
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|397486822|ref|XP_003814520.1| PREDICTED: Fanconi anemia group J protein [Pan paniscus]
Length = 1249
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|323510681|ref|NP_116575.3| regulator of telomere elongation helicase 1 isoform 2 [Homo
sapiens]
Length = 1243
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>gi|38707222|gb|AAR27229.1| DEAH helicase isoform 3 [Mus spretus]
Length = 1164
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAISSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|57012613|sp|Q9BX63.1|FANCJ_HUMAN RecName: Full=Fanconi anemia group J protein; Short=Protein FACJ;
AltName: Full=ATP-dependent RNA helicase BRIP1;
AltName: Full=BRCA1-associated C-terminal helicase 1;
AltName: Full=BRCA1-interacting protein C-terminal
helicase 1; Short=BRCA1-interacting protein 1
gi|13661819|gb|AAK38111.1|AF360549_1 BRCA1-binding helicase-like protein BACH1 [Homo sapiens]
gi|75516497|gb|AAI01473.1| BRCA1 interacting protein C-terminal helicase 1 [Homo sapiens]
gi|75516501|gb|AAI01475.1| BRCA1 interacting protein C-terminal helicase 1 [Homo sapiens]
gi|313883612|gb|ADR83292.1| BRCA1 interacting protein C-terminal helicase 1 [synthetic
construct]
Length = 1249
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|407410515|gb|EKF32919.1| helicase, putative [Trypanosoma cruzi marinkellei]
Length = 951
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y Q +M+ + L+ + ESPTGTGK+L L+C +L W
Sbjct: 13 FPFNPYPAQVEYMRAVIDALNGRCNALLESPTGTGKTLCLLCSVLAW 59
>gi|301897118|ref|NP_114432.2| Fanconi anemia group J protein [Homo sapiens]
gi|119571815|gb|EAW51430.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
gi|119571816|gb|EAW51431.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
gi|119571817|gb|EAW51432.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
gi|119571818|gb|EAW51433.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
Length = 1249
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|38707226|gb|AAR27231.1| DEAH helicase isoform 5 [Mus spretus]
Length = 1170
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAISSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|81872267|sp|Q6H1L8.1|RTEL1_MUSSP RecName: Full=Regulator of telomere elongation helicase 1
gi|38707220|gb|AAR27228.1| DEAH helicase isoform 2 [Mus spretus]
Length = 1203
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAISSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|296201899|ref|XP_002806878.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Callithrix jacchus]
Length = 1252
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|297272722|ref|XP_002808171.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J
protein-like [Macaca mulatta]
Length = 1151
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|338719447|ref|XP_001492963.3| PREDICTED: regulator of telomere elongation helicase 1-like
[Equus caballus]
Length = 1344
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L G+ ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMTKVLECLQKKVNGVLESPTGTGKTLCLLCTTLAW 59
>gi|297715610|ref|XP_002834155.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Pongo abelii]
Length = 1248
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|149033944|gb|EDL88727.1| similar to helicase-like protein NHL isoform 2 [Rattus
norvegicus]
Length = 1264
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|262263449|ref|NP_001160140.1| regulator of telomere elongation helicase 1 isoform 5 [Mus
musculus]
Length = 1128
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|46452191|gb|AAS98192.1| DEAH helicase isoform 1 [Mus spretus]
Length = 1209
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAISSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|344254979|gb|EGW11083.1| Regulator of telomere elongation helicase 1 [Cricetulus griseus]
Length = 1225
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|300797873|ref|NP_001178786.1| regulator of telomere elongation helicase 1 [Rattus norvegicus]
gi|229891752|sp|Q5RJZ1.2|RTEL1_RAT RecName: Full=Regulator of telomere elongation helicase 1
Length = 1274
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|332258882|ref|XP_003278520.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Nomascus leucogenys]
Length = 1248
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|297609925|ref|NP_001063870.2| Os09g0551800 [Oryza sativa Japonica Group]
gi|255679120|dbj|BAF25784.2| Os09g0551800 [Oryza sativa Japonica Group]
Length = 1187
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKW 73
VP EFP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W
Sbjct: 30 VPVEFPY--KPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAW 85
>gi|38707240|gb|AAR27238.1| DEAH helicase isoform 6 [Mus musculus]
Length = 1128
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|393904464|gb|EFO17178.2| hypothetical protein LOAG_11323 [Loa loa]
Length = 449
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
S FPF+ Y+ Q FM+ + L + ESPTGTGK+L L+C + + D+K
Sbjct: 9 STVEFPFEPYECQIKFMEKVVEALWTGQNAALESPTGTGKTLCLLCAAIAFLKDYK 64
>gi|38707228|gb|AAR27232.1| DEAH helicase isoform 6 [Mus spretus]
Length = 1128
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAISSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|354481991|ref|XP_003503184.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1-like [Cricetulus griseus]
Length = 1259
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|312091190|ref|XP_003146892.1| hypothetical protein LOAG_11323 [Loa loa]
Length = 438
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
S FPF+ Y+ Q FM+ + L + ESPTGTGK+L L+C + + D+K
Sbjct: 9 STVEFPFEPYECQIKFMEKVVEALWTGQNAALESPTGTGKTLCLLCAAIAFLKDYK 64
>gi|219110231|ref|XP_002176867.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411402|gb|EEC51330.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 791
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FPF Y Q +M+ + L S+ + ESPTGTGK+L L+C L W + + E
Sbjct: 48 FPFRPYKCQETYMEKVLDALLRSENALLESPTGTGKTLCLLCSTLAWQREQSRLLQQASE 107
Query: 87 AEIKDLEISKNETVSEDWIEQQSFEPTI 114
+ D + N S+D + + PTI
Sbjct: 108 LQNTDASLLAN---SQDAPARAARVPTI 132
>gi|402581791|gb|EJW75738.1| hypothetical protein WUBG_13354, partial [Wuchereria bancrofti]
Length = 93
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FPF+ Y Q FM+ + L + ESPTGTGK+L L+C + + K+ L+
Sbjct: 23 FPFEPYQCQIKFMEKVMEALQMRQNAALESPTGTGKTLCLLCATIAYLKHCKLEILQDSA 82
Query: 87 AEIK 90
EI+
Sbjct: 83 QEIQ 86
>gi|378755955|gb|EHY65980.1| hypothetical protein NERG_00676 [Nematocida sp. 1 ERTm2]
Length = 662
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
E+ +F P + Y Q +F+K+ + N++ GI ESPTGTGK+LS + +++ D +
Sbjct: 29 EIKDKFNLPHELYQGQKDFIKDATEIIRNNRLGILESPTGTGKTLSSLITAMEYLGDSEF 88
Query: 80 A--GLEKIEAEI 89
G+ K A++
Sbjct: 89 ITEGVSKANADL 100
>gi|350590580|ref|XP_003483097.1| PREDICTED: Fanconi anemia group J protein-like [Sus scrofa]
Length = 801
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|281208566|gb|EFA82742.1| DEAD/DEAH box helicase [Polysphondylium pallidum PN500]
Length = 997
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y+ QS M + L + ES TGTGK+LSL+C L+W
Sbjct: 152 FPFQPYECQSTMMHQILEALKGGHNALLESATGTGKTLSLLCATLEW 198
>gi|261188545|ref|XP_002620687.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis
SLH14081]
gi|239593171|gb|EEQ75752.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis
SLH14081]
Length = 851
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTG 61
++ V F P+ YDIQS FM+ LY ++ +K GIFESPT G
Sbjct: 1 MSSVEKNFHHPYSPYDIQSQFMQALYDCIEEAKVGIFESPTADG 44
>gi|321248407|ref|XP_003191119.1| CHL1 helicase [Cryptococcus gattii WM276]
gi|317457586|gb|ADV19332.1| CHL1 helicase, putative [Cryptococcus gattii WM276]
Length = 854
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 13 KEQRPLAEVPSEFPFPF-DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGK 62
K P P FPFP+ YDIQ + M+ ++ +++ K I ESPTGTGK
Sbjct: 7 KSATPSLSTPETFPFPYPKPYDIQLDLMRVVFRAIEDGKIAIVESPTGTGK 57
>gi|395531830|ref|XP_003767976.1| PREDICTED: Fanconi anemia group J protein-like [Sarcophilus
harrisii]
Length = 281
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 58 FPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 104
>gi|169806052|ref|XP_001827771.1| DNA repair helicase [Enterocytozoon bieneusi H348]
gi|161779057|gb|EDQ31083.1| DNA repair helicase [Enterocytozoon bieneusi H348]
Length = 579
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSL--ICGILKWYSDHKIAGL 82
FP++ YDIQ+ F+ + + + K GIF SPTGTGK++SL +C ++ + + L
Sbjct: 6 FPYELYDIQNQFIDDAIKVISDGKIGIFSSPTGTGKTISLLSVCTNFAYHDNDNLYNL 63
>gi|303388455|ref|XP_003072462.1| Rad3/XPD ATP-dependent DNA-binding helicase [Encephalitozoon
intestinalis ATCC 50506]
gi|303301602|gb|ADM11102.1| Rad3/XPD ATP-dependent DNA-binding helicase [Encephalitozoon
intestinalis ATCC 50506]
Length = 678
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
++ VP E PF + Y Q M L L G+ ESPTGTGKSLS+IC +L YS++
Sbjct: 6 ISGVPIEMPF--EPYPAQIVTMTKLISCLTTGTSGLVESPTGTGKSLSIICAVL-GYSEY 62
Query: 78 KIAGLEKIEAEIKDLEISKNETVSEDWIE 106
G + I + ++ K E E+ ++
Sbjct: 63 LKRGAKSINVKRREGGSLKGEEAKEEKLK 91
>gi|356547406|ref|XP_003542103.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Glycine max]
Length = 1001
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP++AY+ Q +M + +L + ESPTGTGK+L L+C L W
Sbjct: 13 FPYEAYESQLVYMDKVIQSLQEKCNALLESPTGTGKTLCLLCATLAW 59
>gi|320165278|gb|EFW42177.1| DNA repair helicase [Capsaspora owczarzaki ATCC 30864]
Length = 1329
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q M+ + L++ + + ESPTGTGKSL+L+C L W
Sbjct: 114 FPFPPYPTQLTMMQKVIQALESKQNALLESPTGTGKSLTLLCSALAW 160
>gi|239613258|gb|EEQ90245.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis ER-3]
gi|327357445|gb|EGE86302.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis ATCC
18188]
Length = 851
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTG 61
++ V F P+ YDIQS FM+ LY ++ +K GIFESPT G
Sbjct: 1 MSSVEKNFHHPYTPYDIQSQFMQALYDCIEEAKVGIFESPTADG 44
>gi|242050104|ref|XP_002462796.1| hypothetical protein SORBIDRAFT_02g032150 [Sorghum bicolor]
gi|241926173|gb|EER99317.1| hypothetical protein SORBIDRAFT_02g032150 [Sorghum bicolor]
Length = 1153
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKW 73
FP+ Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W
Sbjct: 35 FPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAW 86
>gi|194387848|dbj|BAG61337.1| unnamed protein product [Homo sapiens]
Length = 1004
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTG++L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGRTLCLLCTTLAW 59
>gi|196012030|ref|XP_002115878.1| hypothetical protein TRIADDRAFT_30066 [Trichoplax adhaerens]
gi|190581654|gb|EDV21730.1| hypothetical protein TRIADDRAFT_30066 [Trichoplax adhaerens]
Length = 995
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+ FP+ AY Q + M + L K + ESPTG+GKSL+L+C L W
Sbjct: 26 QVEFPYKAYPSQLSMMSKIIQGLQQRKHCLLESPTGSGKSLALLCSALAW 75
>gi|410980592|ref|XP_003996661.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Felis catus]
Length = 1230
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+ FP+ AY Q M ++ L++ + + ESPTG+GKS++L+C L W
Sbjct: 14 KITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSVALLCSALAW 63
>gi|145354926|ref|XP_001421725.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581963|gb|ABP00019.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 749
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FPF+AYD Q FM+ + + + ESPTGTGK+L L+ L + A K
Sbjct: 25 FPFEAYDNQLVFMEKALLAMCRGEHALLESPTGTGKTLCLLASALAFVRSEGRARKRKFR 84
Query: 87 AEIKD 91
E++D
Sbjct: 85 EEVRD 89
>gi|260808249|ref|XP_002598920.1| hypothetical protein BRAFLDRAFT_79851 [Branchiostoma floridae]
gi|229284195|gb|EEN54932.1| hypothetical protein BRAFLDRAFT_79851 [Branchiostoma floridae]
Length = 1352
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYS 75
FP +AY Q M + L+ + + ESPTG+GKSL+L+C L W +
Sbjct: 20 FPCNAYPTQIAMMHKILQGLEREQNCLLESPTGSGKSLALLCSCLAWQT 68
>gi|303289303|ref|XP_003063939.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454255|gb|EEH51561.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 770
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
M++LY L GIFESPTGTGK+LS +C L+W
Sbjct: 1 MRSLYDVLRRGGIGIFESPTGTGKTLSTLCAALQW 35
>gi|401825484|ref|XP_003886837.1| RAD3-like DNA-binding helicase [Encephalitozoon hellem ATCC 50504]
gi|392997993|gb|AFM97856.1| RAD3-like DNA-binding helicase [Encephalitozoon hellem ATCC 50504]
Length = 678
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
PF+ Y Q M L L G+ ESPTGTGKSLS++C +L Y++H G+
Sbjct: 13 MPFEPYPAQIVTMTKLISCLMTGTSGLVESPTGTGKSLSILCAVL-GYNEHLKKGIGGCS 71
Query: 87 AEIKDLEISKNETVSEDWIE 106
A+ ++ K E E+ ++
Sbjct: 72 AKRREGGGQKGEEAKEEKLK 91
>gi|426347251|ref|XP_004041270.1| PREDICTED: Fanconi anemia group J protein-like, partial [Gorilla
gorilla gorilla]
Length = 491
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|412986103|emb|CCO17303.1| predicted protein [Bathycoccus prasinos]
Length = 1048
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 25 FPFPFDA-YDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYSDH----K 78
+ FP+ Y+ Q FM Y N G FESPTGTGK+LS++C L W D +
Sbjct: 32 YSFPYSPPYEQQIQFMSKAYECCRNGIPIGAFESPTGTGKTLSILCSALTWMEDRNRLLR 91
Query: 79 IAGLEKIEAEIKDLEISKNETV 100
+E+ + + + +S E V
Sbjct: 92 AGKVEEADGRVNERLVSSKEGV 113
>gi|426238589|ref|XP_004013233.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Ovis aries]
Length = 1234
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 15 FPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 61
>gi|19074028|ref|NP_584634.1| ATP-DEPENDENT DNA-BINDING HELICASE (RAD3/XPD subfamily)
[Encephalitozoon cuniculi GB-M1]
gi|19068670|emb|CAD25138.1| ATP-DEPENDENT DNA-BINDING HELICASE (RAD3/XPD subfamily)
[Encephalitozoon cuniculi GB-M1]
gi|449329243|gb|AGE95516.1| ATP-dependent DNA-binding helicase [Encephalitozoon cuniculi]
Length = 678
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
++ VP E PF + Y Q M L L G+ ESPTGTGKSLS+IC +L Y++H
Sbjct: 6 ISGVPIEMPF--EPYPAQIVTMTKLISCLMTRTSGLVESPTGTGKSLSIICAVLG-YNEH 62
Query: 78 KIAGLEKIEAEIKDLEISKNETVSED 103
+ I A+ ++ K E E+
Sbjct: 63 LKRSIRGIGAKRREGGGPKGEEAREE 88
>gi|297462303|ref|XP_002702129.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Bos taurus]
Length = 1232
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 16 FPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 62
>gi|156089201|ref|XP_001612007.1| DNA repair helicase (rad3) family protein [Babesia bovis]
gi|154799261|gb|EDO08439.1| DNA repair helicase (rad3) family protein [Babesia bovis]
Length = 948
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILK--WYSDHK 78
E FP+ Y+ Q+ +M+ + + + K + ESPTGTGK+LSLIC L W++ K
Sbjct: 15 EVRFPYTPYENQTVYMETVIKAVRHGKNALLESPTGTGKTLSLICSTLACIWHTRFK 71
>gi|242003120|ref|XP_002422617.1| regulator of telomere elongation helicase 1 rtel1, putative
[Pediculus humanus corporis]
gi|212505418|gb|EEB09879.1| regulator of telomere elongation helicase 1 rtel1, putative
[Pediculus humanus corporis]
Length = 1016
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+P YDIQ ++M + LD + ESPTGTGK+L L + W
Sbjct: 13 FPYPI-PYDIQKSYMNKVLTCLDEKTHAVLESPTGTGKTLCLFAPVTAW 60
>gi|399218668|emb|CCF75555.1| unnamed protein product [Babesia microti strain RI]
Length = 838
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%)
Query: 14 EQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E+ ++ + + FP+ Y+ Q ++ + +++ + + ESPTGTGK+L L+C L +
Sbjct: 2 EKNVVSVLGIDVQFPYKIYEPQKLLIEAIIRSIEYGQNALIESPTGTGKTLCLLCASLAY 61
Query: 74 YSDHKIAGLEKI 85
D +I GL+ I
Sbjct: 62 LCDKRIPGLKII 73
>gi|391337516|ref|XP_003743113.1| PREDICTED: Fanconi anemia group J protein-like [Metaseiulus
occidentalis]
Length = 567
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
PL + FP+ + Y Q M L L K + ESPTGTGKSLSL+C L + D
Sbjct: 15 PLGGLKVLFPYE-NPYPQQKVMMSRLITALKQKKNCLLESPTGTGKSLSLLCAALAFCED 73
Query: 77 HK---IAGLEK 84
K GLEK
Sbjct: 74 EKRKHRKGLEK 84
>gi|350407679|ref|XP_003488158.1| PREDICTED: Fanconi anemia group J protein-like [Bombus impatiens]
Length = 959
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
P Y Q M L + + ESPTG+GK+L+L+CG+L W+ H
Sbjct: 212 LPVKPYSCQVAVMNQLIQGCIKQENCLLESPTGSGKTLALLCGVLAWHDHH 262
>gi|326478541|gb|EGE02551.1| DNA helicase [Trichophyton equinum CBS 127.97]
Length = 850
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 31/56 (55%), Gaps = 9/56 (16%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT-GKSLSLICGILKWYSDHK 78
+F P+ YDIQ+ FM+ LY G E G GKSLSLICG L W DHK
Sbjct: 4 DFRHPYRPYDIQAQFMEALY--------GCIEDGGGRYGKSLSLICGSLAWLRDHK 51
>gi|308802574|ref|XP_003078600.1| Helicase of the DEAD superfamily (ISS) [Ostreococcus tauri]
gi|116057053|emb|CAL51480.1| Helicase of the DEAD superfamily (ISS) [Ostreococcus tauri]
Length = 970
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
+FP D + Q M + TL + + ESPTGTGK+L+L+CG L W +K+
Sbjct: 110 KFPEGLDPHPAQMMTMSTIIRTLTRKEHAMIESPTGTGKTLALLCGALAWQEKNKV 165
>gi|440494239|gb|ELQ76638.1| Helicase of the DEAD superfamily [Trachipleistophora hominis]
Length = 773
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 13 KEQRPLAEVPSEFPFPFDA-----YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
+EQR +P P + YD Q +F++ T++N++ IF SPTGTGK+LSL+
Sbjct: 13 REQRGTKSTCYFYPHPMRSLNVTLYDSQKDFIQKAQQTIENNQTAIFSSPTGTGKTLSLL 72
Query: 68 CGILKWYSDHKIAGLEKIEAEIKDL--EISKNET 99
++ + + + + A K L E++ N T
Sbjct: 73 LSVVPYIEKNVVHDFSGVSAANKALINELNFNNT 106
>gi|240279284|gb|EER42789.1| DEAD_2 protein [Ajellomyces capsulatus H143]
Length = 119
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
+ + F PF YDIQ FM+ LY ++ K GIFESPTGT + KW +D
Sbjct: 1 MNSIEKNFHHPFIPYDIQRQFMQALYDCIEGGKVGIFESPTGT------LLDPYKWTAD 53
>gi|383856223|ref|XP_003703609.1| PREDICTED: Fanconi anemia group J protein-like [Megachile
rotundata]
Length = 935
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
FP Y Q M + S+ + ESPTGTGK+L+L+C +L W+ H
Sbjct: 204 FPAKPYSCQMAVMNKVIQGCVKSENCLLESPTGTGKTLALLCSVLAWHDHH 254
>gi|334322387|ref|XP_001363088.2| PREDICTED: Fanconi anemia group J protein [Monodelphis domestica]
Length = 1179
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLALMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|407849947|gb|EKG04513.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y Q +M+ + L+ + ESPTGTGK+L L+C L W
Sbjct: 13 FPFNPYPAQVEYMRAVIDALNGRCNALLESPTGTGKTLCLLCSALAW 59
>gi|410928893|ref|XP_003977834.1| PREDICTED: Fanconi anemia group J protein homolog [Takifugu
rubripes]
Length = 1109
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L+ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPRKAYPSQLAMMNSIIRGLNTGQHCLLESPTGSGKSLALLCSTLGW 63
>gi|58264204|ref|XP_569258.1| CHL1 helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|57223908|gb|AAW41951.1| CHL1 helicase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 849
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 17 PLAEVPSEFPFPF-DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGK 62
P P FPFP+ YDIQ + M+ ++ +++ K I ESPTGTGK
Sbjct: 11 PCLPTPETFPFPYPKPYDIQLDLMRVVFRAIEDGKIAIVESPTGTGK 57
>gi|429965105|gb|ELA47102.1| hypothetical protein VCUG_01375 [Vavraia culicis 'floridensis']
Length = 745
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 32 YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKD 91
YD Q +F++ T++N++ IF SPTGTGK+LSL+ I+ + H I+ + + +
Sbjct: 9 YDSQKDFIEKAQRTIENNQVAIFSSPTGTGKTLSLLLSIVPYIEKHVISDFSGVSSANRA 68
Query: 92 L--EISKNET 99
L E++ N+T
Sbjct: 69 LINELNFNDT 78
>gi|402471474|gb|EJW05200.1| hypothetical protein EDEG_00732 [Edhazardia aedis USNM 41457]
Length = 1186
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 28 PFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY 74
P+ YDIQ +F++ L K GIF SPTGTGK+LSL+ LK++
Sbjct: 5 PYKLYDIQKDFIEKAIKILKTGKIGIFSSPTGTGKTLSLLTS-LKYF 50
>gi|392577022|gb|EIW70152.1| hypothetical protein TREMEDRAFT_29466 [Tremella mesenterica DSM
1558]
Length = 840
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 17 PLAEVPSEFPFPF-DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
P P F FP+ YDIQ M+ ++ L++ K I ESPTGTGKS
Sbjct: 11 PSLPTPDRFEFPYAKPYDIQVELMRTVFRALEDGKIAIVESPTGTGKS 58
>gi|344285337|ref|XP_003414418.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J
protein-like [Loxodonta africana]
Length = 1240
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M + L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNCIVRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>gi|429329870|gb|AFZ81629.1| DNA repair helicase, putative [Babesia equi]
Length = 956
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
E FP+ Y Q +M+ + + N K + ESPTGTGK+LSLIC L ++K
Sbjct: 15 EVRFPYPPYQSQKLYMEAVIKAVKNGKNALLESPTGTGKTLSLICSSLACLLNNK 69
>gi|348567428|ref|XP_003469501.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J
protein-like [Cavia porcellus]
Length = 1209
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M + L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNCIVRGLNSRQHCLLESPTGSGKSLALLCSALAW 63
>gi|71413416|ref|XP_808847.1| helicase [Trypanosoma cruzi strain CL Brener]
gi|70873137|gb|EAN86996.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y Q +M+ + L + ESPTGTGK+L L+C L W
Sbjct: 13 FPFNPYPAQVEYMRAVIDALKGRCNALLESPTGTGKTLCLLCSALAW 59
>gi|405118752|gb|AFR93526.1| CHL1 helicase [Cryptococcus neoformans var. grubii H99]
Length = 853
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 17 PLAEVPSEFPFPF-DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGK 62
P P FPFP+ YDIQ + M+ ++ +++ K I ESPTGTGK
Sbjct: 11 PSLPTPETFPFPYPKPYDIQLDLMRVVFRAIEDGKIAIVESPTGTGK 57
>gi|300707205|ref|XP_002995821.1| hypothetical protein NCER_101193 [Nosema ceranae BRL01]
gi|239605041|gb|EEQ82150.1| hypothetical protein NCER_101193 [Nosema ceranae BRL01]
Length = 695
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
FP++ Y+ Q M+ + + G+ ESPTGTGKSLS++C +L Y +H
Sbjct: 13 FPYEPYESQKQTMEKILTCMMEGSTGMIESPTGTGKSLSILCAVLA-YKEH 62
>gi|340379361|ref|XP_003388195.1| PREDICTED: hypothetical protein LOC100635699 [Amphimedon
queenslandica]
Length = 375
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 4 KTPNEDKEFKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
+ PN + + P++ VP FP Y Q M + L+ S + ESPTG+GKS
Sbjct: 2 EAPNPKEVRNDLYPISGVPVRFPC--KPYPTQLQMMSKIIQALNKSDNALLESPTGSGKS 59
Query: 64 LSLICGILKW 73
L+L+C + W
Sbjct: 60 LALLCSTIAW 69
>gi|302799956|ref|XP_002981736.1| hypothetical protein SELMODRAFT_9067 [Selaginella moellendorffii]
gi|300150568|gb|EFJ17218.1| hypothetical protein SELMODRAFT_9067 [Selaginella moellendorffii]
Length = 65
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTL-------DNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q FM + TL D + ESPTG+GKSLSL+C L W
Sbjct: 10 FPYRAYGSQLAFMGKVITTLERAFRDPDGHCNALLESPTGSGKSLSLLCAALAW 63
>gi|380021224|ref|XP_003694471.1| PREDICTED: Fanconi anemia group J protein homolog, partial [Apis
florea]
Length = 878
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 10 KEFKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICG 69
+E + Q L + P Y Q M L + + ESPTG+GK+L+L+CG
Sbjct: 144 QEIEIQHELLISGIKVKLPVKPYSCQIAVMNKLIQGCVKGENCLLESPTGSGKTLALLCG 203
Query: 70 ILKWYSDHKIA 80
+L W+ DH I
Sbjct: 204 VLAWH-DHYIG 213
>gi|71660707|ref|XP_822069.1| helicase [Trypanosoma cruzi strain CL Brener]
gi|70887462|gb|EAO00218.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y Q +M+ + L + ESPTGTGK+L L+C L W
Sbjct: 13 FPFNPYPAQVEYMRAVIDALKGRCNALLESPTGTGKTLCLLCSALAW 59
>gi|340503511|gb|EGR30093.1| regulator of telomere elongation helicase 1, putative
[Ichthyophthirius multifiliis]
Length = 671
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 4 KTPNEDKEFKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
K P E + Q + + FP+ Y Q +M + +L+ + +SPTGTGK+
Sbjct: 28 KIPIEKRIMSNQHLITIDGIDIYFPYRPYPQQIMYMSKVIQSLNQGNNSLLQSPTGTGKT 87
Query: 64 LSLICGILKWYSDHKIAGLEKIE 86
L L+C + W ++ E I+
Sbjct: 88 LCLLCATIAWLKKYREQNQENID 110
>gi|452822429|gb|EME29448.1| DNA excision repair protein ERCC-2 [Galdieria sulphuraria]
Length = 788
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 45 TLDNSKFGIFESPTGTGKSLSLICGILKWYSD-HKIAGLEK 84
++ GI ESPTGTGKSLS++CG+L W ++ G+EK
Sbjct: 3 VIETGTIGILESPTGTGKSLSIVCGVLTWLRQYYERNGIEK 43
>gi|124088740|ref|XP_001347217.1| Helicase [Paramecium tetraurelia strain d4-2]
gi|50057606|emb|CAH03590.1| Helicase, putative [Paramecium tetraurelia]
Length = 703
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 14 EQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNS---------KFGIFESPTGTGKSL 64
E++ + S++PFP Y Q + K++Y +L K IFESPTGTGKS
Sbjct: 6 EEKIRERIKSQYPFP--PYQSQLDLSKDIYVSLAQGTKVQMYMIVKVSIFESPTGTGKSY 63
Query: 65 SLICGILKWYSDHKIAGLEKIEAEIK 90
+LI G L + D K L K++ + +
Sbjct: 64 ALIEGALNYLEDIKSNTLIKVKQKCQ 89
>gi|197098236|ref|NP_001124929.1| regulator of telomere elongation helicase 1 [Pongo abelii]
gi|75042437|sp|Q5RE34.1|RTEL1_PONAB RecName: Full=Regulator of telomere elongation helicase 1
gi|55726407|emb|CAH89973.1| hypothetical protein [Pongo abelii]
Length = 1302
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ES TGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESHTGTGKTLCLLCTTLAWREHLRDGISARKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>gi|194379638|dbj|BAG63785.1| unnamed protein product [Homo sapiens]
Length = 1243
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 25/47 (53%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI SPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILGSPTGTGKTLCLLCTTLAW 59
>gi|403341333|gb|EJY69968.1| Regulator of telomere elongation helicase 1 [Oxytricha trifallax]
Length = 1216
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 24 EFPFPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI---CGILKWYSDH 77
+ FP++ Y Q N++K+L L + + ESPTGTGK+L L+ G LK YSD+
Sbjct: 176 QVHFPYEKPYQCQENYIKSLVKALRKKQNALLESPTGTGKTLCLLSGTLGFLKAYSDN 233
>gi|307177075|gb|EFN66343.1| Fanconi anemia group J protein [Camponotus floridanus]
Length = 345
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP + Y Q M +L + + ESPTG+GK+L+L+CG L W
Sbjct: 280 FPVEPYPCQKAVMNSLIKGCTKEQHCLLESPTGSGKTLALLCGALAW 326
>gi|253742830|gb|EES99497.1| TFIIH basal transcription factor complex helicase subunit
[Giardia intestinalis ATCC 50581]
Length = 1060
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
EF FPF+ Y Q +M +L L+ + + ESPTGTGK+LSL+ L +
Sbjct: 11 EFQFPFEPYPSQIEYMNSLITALNGKENALLESPTGTGKTLSLLIPALAY 60
>gi|74138560|dbj|BAE41179.1| unnamed protein product [Mus musculus]
gi|74216986|dbj|BAE26603.1| unnamed protein product [Mus musculus]
Length = 898
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 63
>gi|388583056|gb|EIM23359.1| DNA repair helicase [Wallemia sebi CBS 633.66]
Length = 831
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FP++ Y IQ+ FM Y +NSK + ESPTGTGKSLSL+ L W D+ I E
Sbjct: 8 FPYEPYPIQNEFMSACYDACENSKVAVLESPTGTGKSLSLLVASLSWLRDNAIRSRESTI 67
Query: 87 AEIKDLEISKNETVSEDWIEQQSFE 111
+++++ E+ N W+ + + +
Sbjct: 68 SKLRE-ELLANRGNKPAWVIEHTIK 91
>gi|326433574|gb|EGD79144.1| hypothetical protein PTSG_09876 [Salpingoeca sp. ATCC 50818]
Length = 879
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 31/62 (50%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FPF Y Q + + LD + ESPTG+GKSL+L+C L W + L +
Sbjct: 13 FPFKPYPSQFLLISAILKALDKGDNALLESPTGSGKSLALLCASLAWQKAERTRLLAEFH 72
Query: 87 AE 88
AE
Sbjct: 73 AE 74
>gi|74146859|dbj|BAE41393.1| unnamed protein product [Mus musculus]
Length = 824
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 63
>gi|160333450|ref|NP_001103766.1| BRCA1 interacting protein C-terminal helicase 1 [Danio rerio]
gi|126843119|gb|ABO27623.1| Fanconi anemia J [Danio rerio]
Length = 1217
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 18 LAEVPSEFP-------FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGI 70
+A P E+ FP AY Q M ++ L+N + + ESPTG+GKSL+L+C
Sbjct: 1 MAATPVEYTIGGVKINFPCKAYPSQLAMMNSIIRGLNNGQHCLLESPTGSGKSLALLCSA 60
Query: 71 LKW 73
L W
Sbjct: 61 LAW 63
>gi|390345521|ref|XP_781875.3| PREDICTED: Fanconi anemia group J protein-like
[Strongylocentrotus purpuratus]
Length = 1704
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+ FP AY Q + M + ++ + + ESPTG+GKSL+L+C L W
Sbjct: 42 KLAFPCKAYPTQLSMMSMIIKGINRRQNCLLESPTGSGKSLALLCSSLAW 91
>gi|308812532|ref|XP_003083573.1| helicase-related (ISS) [Ostreococcus tauri]
gi|116055454|emb|CAL58122.1| helicase-related (ISS) [Ostreococcus tauri]
Length = 1048
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FP+DAYD Q F++ + + + ESPTGTGK+L L+ L + + G K
Sbjct: 22 FPYDAYDAQIVFIERALEAMCRKQSALLESPTGTGKTLCLLSAALAYARNE---GRAKKR 78
Query: 87 AEIKDLEISKNETVSEDWIEQQ 108
+ S +ETV+E++++ +
Sbjct: 79 RARAREKASTSETVTEEFVDAE 100
>gi|74217142|dbj|BAC34798.2| unnamed protein product [Mus musculus]
Length = 577
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 63
>gi|396080955|gb|AFN82575.1| Rad3/XPD ATP-dependent DNA-binding helicase [Encephalitozoon
romaleae SJ-2008]
Length = 678
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
++ VP E PF + Y Q M L L G+ ESPTGTGKSLS++C L YS+H
Sbjct: 6 ISGVPIEMPF--EPYPAQIITMTKLISCLMTGTSGLVESPTGTGKSLSILCAALG-YSEH 62
Query: 78 KIAGLEKIEAEIKDLEISKNETVSED 103
G+ + ++ K E V E+
Sbjct: 63 LKRGIRSGCGKRREGGGMKGEEVKEE 88
>gi|302768379|ref|XP_002967609.1| hypothetical protein SELMODRAFT_408754 [Selaginella
moellendorffii]
gi|300164347|gb|EFJ30956.1| hypothetical protein SELMODRAFT_408754 [Selaginella
moellendorffii]
Length = 1004
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 27 FPFDAYDIQSNFMKNLYYTL-------DNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
FP+ AY Q FM + TL D + ESPTG+GKSLSL+C L W +
Sbjct: 17 FPYRAYGSQLAFMGKVITTLERAFRDPDGHCNALLESPTGSGKSLSLLCAALAWQQHRMV 76
Query: 80 AG 81
A
Sbjct: 77 AA 78
>gi|403361448|gb|EJY80425.1| ATP-dependent RNA helicase Chl1, putative [Oxytricha trifallax]
Length = 779
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 20/80 (25%)
Query: 39 MKNLYYTLDN-SKFGIFESPTGT------------GKSLSLICGILKWYSDHKIAGLEKI 85
M +Y TL K G+FESPTGT GKSLSL+C IL WY + +++
Sbjct: 1 MDKIYDTLSQEKKIGLFESPTGTVIKKYIRLNFIQGKSLSLVCAILTWY----LGKDKQV 56
Query: 86 EAEIKDLEISKNETVSEDWI 105
+ E D+ K + +DW+
Sbjct: 57 KCEKSDI---KKDAKEDDWL 73
>gi|324503421|gb|ADY41490.1| Regulator of telomere elongation helicase 1 [Ascaris suum]
Length = 993
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
FP++ YD Q +M+ + TL S ESPTGTGK+L L+C + + + K
Sbjct: 13 FPYEPYDCQLLYMEKVIETLKRSFNAALESPTGTGKTLCLLCATIAFTKEMK 64
>gi|299470612|emb|CBN80234.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 301
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 27 FPFDAYDI-QSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
FPF+ + Q M+ + L + + + ESPTGTGKS +++C L W D
Sbjct: 21 FPFETPMVPQDQMMQRIIAALKSKRHALLESPTGTGKSAAMLCASLAWQRD 71
>gi|380013392|ref|XP_003690744.1| PREDICTED: regulator of telomere elongation helicase 1 homolog,
partial [Apis florea]
Length = 970
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y IQ +M + L NSK G+ ESPTGTGK+
Sbjct: 13 FPFKPYSIQEEYMAKVIQCLQNSKNGVLESPTGTGKT 49
>gi|449015796|dbj|BAM79198.1| similar to BRCA1-binding helicase-like protein BACH1
[Cyanidioschyzon merolae strain 10D]
Length = 1103
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 6 PNEDKEFKEQRPL--AEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
PN + K R L A + +FP + + Q M + L ++ ESPTGTGKS
Sbjct: 10 PNGAQTLKTWRTLEIAGLEVKFPTELEPHKPQLIIMNQVIRCLQRAQNACIESPTGTGKS 69
Query: 64 LSLICGILKWYSDHK 78
L+L+C L W K
Sbjct: 70 LALLCSALAWLEKEK 84
>gi|328783139|ref|XP_396001.4| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Apis mellifera]
Length = 976
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y IQ +M + L NSK G+ ESPTGTGK+
Sbjct: 13 FPFKPYSIQEEYMAKVIQCLQNSKNGVLESPTGTGKT 49
>gi|391868700|gb|EIT77910.1| helicase of the DEAD superfamily [Aspergillus oryzae 3.042]
Length = 734
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLS 65
P AE EF P+ YDIQ FM+ LY ++ K +FESPTG LS
Sbjct: 3 PQAE---EFHHPYSPYDIQLQFMRALYSCIEKGKVAVFESPTGKLAGLS 48
>gi|341901524|gb|EGT57459.1| CBN-DOG-1 protein [Caenorhabditis brenneri]
Length = 987
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 14 EQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI---CGI 70
EQ + VP FP Y Q + + L NS+ + ESPTG+GK+++L+ C
Sbjct: 76 EQLMMLSVPVRFPQGMSLYPTQKLMIVRILAALKNSQNVLGESPTGSGKTMALLSSTCAW 135
Query: 71 LKWYSDHKIAGLEKIEAE-----IKDLEISKNETVSEDWIEQQSFEPTI 114
LK Y D K EK +D E SK+ E+ + ++ +P I
Sbjct: 136 LKQYIDEKRESKEKCAVHGNFMRHEDDEDSKDGIKKEEDLAKEDIKPVI 184
>gi|313247490|emb|CBY15705.1| unnamed protein product [Oikopleura dioica]
Length = 760
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
+P FPF + Y Q +M+ L Y+++N + E P GTGK+++++ +L + H A
Sbjct: 8 IPVLFPFDY-VYPEQLAYMRELKYSIENRGHALIEMPCGTGKTVTILSFLLAYKKAHP-A 65
Query: 81 GLEKI 85
LEKI
Sbjct: 66 SLEKI 70
>gi|164662899|ref|XP_001732571.1| hypothetical protein MGL_0346 [Malassezia globosa CBS 7966]
gi|159106474|gb|EDP45357.1| hypothetical protein MGL_0346 [Malassezia globosa CBS 7966]
Length = 837
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
++P FP+P Y Q ++M +L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 7 DLPVLFPYP-KIYPEQYSYMVDLKRTLDVKGHGVLEMPSGTGKTVSLLSLIISYQRFYPG 65
Query: 74 -----YSDHKIAGLEKIEAEIKDL 92
Y ++ +EK AE+K L
Sbjct: 66 SRKLVYCSRTVSEIEKALAELKRL 89
>gi|121799524|sp|Q2U587.1|CHL1_ASPOR RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|83773151|dbj|BAE63278.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 721
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLS 65
P AE EF P+ YDIQ FM+ LY ++ K +FESPTG LS
Sbjct: 3 PQAE---EFHHPYSPYDIQLQFMRALYSCIEKGKVAVFESPTGKLAGLS 48
>gi|322781255|gb|EFZ10173.1| hypothetical protein SINV_12884 [Solenopsis invicta]
Length = 884
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y +Q +MK + L NS+ G+ ESPTGTGK+
Sbjct: 13 FPFKPYPVQLEYMKKVIECLQNSQHGVLESPTGTGKT 49
>gi|449269835|gb|EMC80576.1| Fanconi anemia group J protein like protein [Columba livia]
Length = 1261
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M + L+N + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSALSW 63
>gi|237840857|ref|XP_002369726.1| DNA repair helicase, putative [Toxoplasma gondii ME49]
gi|211967390|gb|EEB02586.1| DNA repair helicase, putative [Toxoplasma gondii ME49]
Length = 1649
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 12 FKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
F E+R E E FPF Y Q FM+ + + + + ESPTGTGK+L L+C L
Sbjct: 58 FGEKR---EDSVEVDFPFQPYPCQEKFMEKVIDACVHGEHALLESPTGTGKTLCLLCASL 114
Query: 72 KW 73
+
Sbjct: 115 AY 116
>gi|221503270|gb|EEE28968.1| DNA repair helicase, putative [Toxoplasma gondii VEG]
Length = 1649
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 12 FKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
F E+R E E FPF Y Q FM+ + + + + ESPTGTGK+L L+C L
Sbjct: 58 FGEKR---EDSVEVDFPFQPYPCQEKFMEKVIDACVHGEHALLESPTGTGKTLCLLCASL 114
Query: 72 KW 73
+
Sbjct: 115 AY 116
>gi|221482942|gb|EEE21273.1| DNA repair helicase, putative [Toxoplasma gondii GT1]
Length = 1649
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 12 FKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
F E+R E E FPF Y Q FM+ + + + + ESPTGTGK+L L+C L
Sbjct: 58 FGEKR---EDSVEVDFPFQPYPCQEKFMEKVIDACVHGEHALLESPTGTGKTLCLLCASL 114
Query: 72 KW 73
+
Sbjct: 115 AY 116
>gi|169806602|ref|XP_001828045.1| DNA repair helicase [Enterocytozoon bieneusi H348]
gi|161779173|gb|EDQ31197.1| DNA repair helicase [Enterocytozoon bieneusi H348]
Length = 670
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ Y Q M+ + + +SK + ESPTGTGKSL+++C ++ +
Sbjct: 13 FPYKPYPAQIQTMETMLKSFGSSKCALIESPTGTGKSLAILCAVMGY 59
>gi|162462746|ref|NP_001104820.1| FancJ-like protein [Bombyx mori]
gi|161339205|dbj|BAF94023.1| FancJ-like protein [Bombyx mori]
Length = 851
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
P + Y Q + + T+ ++ + ESPTG+GK+L+L+CG L W
Sbjct: 73 LPVNPYGTQKALIHQVIKTIKAAQNCLLESPTGSGKTLALLCGTLAW 119
>gi|145495232|ref|XP_001433609.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400728|emb|CAK66212.1| unnamed protein product [Paramecium tetraurelia]
Length = 702
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
FP+ F Y Q +M+ L TLD GI E PTGTGK++SL+ IL + +
Sbjct: 12 FPYKF-LYKEQLEYMQALKQTLDEKGHGILEMPTGTGKTVSLLAFILAYLAQR 63
>gi|401396986|ref|XP_003879954.1| hypothetical protein NCLIV_004030 [Neospora caninum Liverpool]
gi|325114362|emb|CBZ49919.1| hypothetical protein NCLIV_004030 [Neospora caninum Liverpool]
Length = 1669
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FPF+ Y Q FM+ + + + ESPTGTGK+L L+C L +
Sbjct: 65 EIDFPFEPYPCQEKFMEKVVEACVREEHALLESPTGTGKTLCLLCASLAY 114
>gi|226289058|gb|EEH44570.1| DNA repair helicase RAD3 [Paracoccidioides brasiliensis Pb18]
Length = 791
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW--- 73
P ++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 52 PNLDLPVLFPYP-RIYPEQYAYMCDLKKTLDTGGHCVLEMPSGTGKTVSLLSLIIAYQQH 110
Query: 74 --------YSDHKIAGLEKIEAEIKDL 92
Y ++ +EK AE+K L
Sbjct: 111 KPEQRKLIYCSRTMSEIEKALAELKAL 137
>gi|428183991|gb|EKX52847.1| hypothetical protein GUITHDRAFT_39398, partial [Guillardia theta
CCMP2712]
Length = 719
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDN-SKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q ++ L L + + ESPTGTGK+L L+CG+L W
Sbjct: 8 FPFRPYGSQVRLLEALIDALSAPGRHALLESPTGTGKTLCLLCGVLGW 55
>gi|168063226|ref|XP_001783574.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664903|gb|EDQ51606.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 858
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH---KIAGLEKIEAE 88
M +Y L I ESPTGTGK+LSLIC L+W D ++A K++A+
Sbjct: 1 MNVVYRALQKGGVCIVESPTGTGKTLSLICSALQWLQDEHTLRLANRPKVDAQ 53
>gi|123437769|ref|XP_001309677.1| helicase [Trichomonas vaginalis G3]
gi|121891414|gb|EAX96747.1| helicase, putative [Trichomonas vaginalis G3]
Length = 859
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 47 DNSKFGIFESPTGTGKSLSLICGILKW 73
+N KF + ESPTGTGK+LSL+C L W
Sbjct: 9 ENGKFALLESPTGTGKTLSLLCSTLAW 35
>gi|300120242|emb|CBK19796.2| unnamed protein product [Blastocystis hominis]
Length = 759
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 23/35 (65%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
M L+ L GI ESPTGTGK+LSL+CG L W
Sbjct: 1 MNTLFDILMKGNIGIIESPTGTGKTLSLLCGSLTW 35
>gi|402224656|gb|EJU04718.1| DNA repair helicase [Dacryopinax sp. DJM-731 SS1]
Length = 798
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q ++M +L TLD G+ E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYSYMCDLKKTLDAQGHGVLEMPSGTGKTVSLLSLIVSYQQHSPHPRKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDL---EISKNETVSEDWIEQQSF 110
+ +EK +E++ L +S+ ET E+ ++++SF
Sbjct: 72 CSRTVPEIEKALSELQRLMKYRVSQAET-PEERMKEESF 109
>gi|148232300|ref|NP_001083272.1| BRCA1 interacting protein C-terminal helicase 1 [Xenopus laevis]
gi|37747678|gb|AAH60014.1| MGC68622 protein [Xenopus laevis]
Length = 713
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FP AY Q M ++ L+ + + ESPTG+GKSL+L+C L W + G + ++
Sbjct: 17 FPCRAYPSQLAMMNSIMRGLNCKQHCLLESPTGSGKSLALLCSALAW--QQSLYGKQLVD 74
Query: 87 AEIKDLEISKNETVS 101
+ + E K E V+
Sbjct: 75 EKSDEKEWKKMERVT 89
>gi|308161158|gb|EFO63616.1| TFIIH basal transcription factor complex helicase subunit
[Giardia lamblia P15]
Length = 1060
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
F FPF+ Y Q +M +L L+ + + ESPTGTGK+LSL+
Sbjct: 11 HFRFPFEPYPSQMKYMSSLITALNKKENALLESPTGTGKTLSLL 54
>gi|398396458|ref|XP_003851687.1| DNA repair helicase [Zymoseptoria tritici IPO323]
gi|339471567|gb|EGP86663.1| hypothetical protein MYCGRDRAFT_43883 [Zymoseptoria tritici IPO323]
Length = 801
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS---LSLICGILKWYSD 76
++P FP+P Y Q +M +L TLD+ + E P+GTGK+ LSLI ++Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKRTLDSGGHCVLEMPSGTGKTVSLLSLIVAYQQFYPE 65
Query: 77 HK--------IAGLEKIEAEIKDLEISKNETVSE 102
H+ ++ +EK AE+K L + + + E
Sbjct: 66 HRKLIYCSRTMSEIEKALAELKALMKYRADQLGE 99
>gi|307197478|gb|EFN78712.1| Regulator of telomere elongation helicase 1 [Harpegnathos
saltator]
Length = 963
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y +Q +M+ + L N + G+ ESPTGTGK+
Sbjct: 13 FPFKPYSVQEEYMRKVIECLQNGQHGVLESPTGTGKT 49
>gi|430813060|emb|CCJ29560.1| unnamed protein product [Pneumocystis jirovecii]
Length = 774
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCHLKKTLDAGGHCVLEMPSGTGKTVSLLSLIISYQKVFEQ 65
Query: 74 -----YSDHKIAGLEKIEAEIKDL 92
Y ++ +EKI E+K+L
Sbjct: 66 HRKLVYCSRTMSEIEKILVELKNL 89
>gi|145345288|ref|XP_001417148.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577375|gb|ABO95441.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 938
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
+FP + + Q+ M ++ L + + ESPTGTGK+L+L+CG L W +E
Sbjct: 133 KFPEGLNPHPAQTMTMSSIIRALTKREHAMIESPTGTGKTLALLCGALAWQEREVALSME 192
Query: 84 K 84
K
Sbjct: 193 K 193
>gi|332030654|gb|EGI70342.1| Regulator of telomere elongation helicase 1-like protein
[Acromyrmex echinatior]
Length = 976
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y +Q +MK + L N + G+ ESPTGTGK+
Sbjct: 13 FPFKPYPVQEEYMKKVIECLQNGQHGVLESPTGTGKT 49
>gi|307176988|gb|EFN66294.1| Regulator of telomere elongation helicase 1 [Camponotus
floridanus]
Length = 978
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y +Q +M+ + L N + G+ ESPTGTGK+
Sbjct: 13 FPFKPYSVQEEYMRKVIECLQNGQHGVLESPTGTGKT 49
>gi|159118615|ref|XP_001709526.1| TFIIH basal transcription factor complex helicase subunit
[Giardia lamblia ATCC 50803]
gi|157437643|gb|EDO81852.1| TFIIH basal transcription factor complex helicase subunit
[Giardia lamblia ATCC 50803]
Length = 1059
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
F FPF+ Y Q +M +L L+ + + ESPTGTGK+LSL+
Sbjct: 11 HFQFPFEPYPSQIEYMSSLITALNKKENALLESPTGTGKTLSLL 54
>gi|440635897|gb|ELR05816.1| DNA repair helicase rad15 [Geomyces destructans 20631-21]
Length = 795
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS---LSLICGILKWYSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK+ LSLI ++Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQYYPE 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ +EK AE+K L
Sbjct: 66 HRKLIYCSRTMSEIEKALAELKAL 89
>gi|313233732|emb|CBY09902.1| unnamed protein product [Oikopleura dioica]
Length = 1145
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FP++ Y Q ++M L + I ESPTGTGK+L L+ +L + +H A ++K
Sbjct: 13 FPYEPYPAQDSYMSKCIEALKSGCHAILESPTGTGKTLCLLASVLA-FREHYFAEMKK 69
>gi|310798566|gb|EFQ33459.1| DNA repair helicase [Glomerella graminicola M1.001]
Length = 791
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
E+P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 7 ELPVIFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHNPE 65
Query: 74 -----YSDHKIAGLEKIEAEIKDL 92
Y ++ +EK AE+K L
Sbjct: 66 HRKLIYCSRTMSEIEKALAELKAL 89
>gi|17507137|ref|NP_493618.1| Protein DOG-1 [Caenorhabditis elegans]
gi|3876642|emb|CAB04262.1| Protein DOG-1 [Caenorhabditis elegans]
Length = 983
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 14 EQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI---CGI 70
EQ + VP P Y Q + + L NS+ + ESPTG+GK+++L+ C
Sbjct: 73 EQLMMLGVPVRVPRGLSLYSTQKLMIVRILTALKNSQNVLGESPTGSGKTMALLASTCAW 132
Query: 71 LKWYSDHKIAGLEKIE 86
LK Y D K EK E
Sbjct: 133 LKQYIDEKRESKEKCE 148
>gi|145498283|ref|XP_001435129.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402259|emb|CAK67732.1| unnamed protein product [Paramecium tetraurelia]
Length = 722
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
FP+ F Y Q +M+ L TLD GI E PTGTGK++SL+ I+ + +
Sbjct: 12 FPYKF-LYKEQLEYMQALKQTLDEKGHGILEMPTGTGKTVSLLALIIAYLAQR 63
>gi|194382496|dbj|BAG64418.1| unnamed protein product [Homo sapiens]
Length = 127
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|320169108|gb|EFW46007.1| hypothetical protein CAOG_03975 [Capsaspora owczarzaki ATCC
30864]
Length = 1452
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
FPF Y Q M ++ ++ + + ES TGTGKSL+++C L W +++
Sbjct: 18 FPFQPYPAQIAMMSSVIRAVEKRQNALIESATGTGKSLAMLCASLSWQAEY 68
>gi|426195896|gb|EKV45825.1| histidine phosphotransfer protein [Agaricus bisporus var.
bisporus H97]
Length = 863
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 20 EVPSEFP-FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGK 62
E P FP FP+D Y IQ++ M++LY +++ I ESPTGTGK
Sbjct: 6 ETPDVFPAFPYDPPYPIQTDLMRHLYDAIESRCISIVESPTGTGK 50
>gi|296645|emb|CAA36463.1| ercc2 gene product [Homo sapiens]
Length = 730
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|402905923|ref|XP_003915757.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Papio anubis]
Length = 760
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|380799421|gb|AFE71586.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1, partial [Macaca mulatta]
Length = 771
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 23 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 82
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 83 YCSRTVPEIEKVIEELRKL 101
>gi|307686333|dbj|BAJ21097.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [synthetic construct]
Length = 760
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|119577746|gb|EAW57342.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 (xeroderma pigmentosum D),
isoform CRA_b [Homo sapiens]
Length = 429
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|426389184|ref|XP_004061004.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Gorilla gorilla gorilla]
gi|83405523|gb|AAI10524.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Homo sapiens]
gi|119577745|gb|EAW57341.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 (xeroderma pigmentosum D),
isoform CRA_a [Homo sapiens]
gi|383416479|gb|AFH31453.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1 [Macaca mulatta]
Length = 760
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|403299021|ref|XP_003940291.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Saimiri boliviensis boliviensis]
Length = 782
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 34 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 93
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 94 YCSRTVPEIEKVIEELRKL 112
>gi|350538411|ref|NP_001233519.1| TFIIH basal transcription factor complex helicase subunit [Pan
troglodytes]
gi|397493359|ref|XP_003817575.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Pan paniscus]
gi|343958692|dbj|BAK63201.1| TFIIH basal transcription factor complex helicase subunit [Pan
troglodytes]
Length = 760
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|15834617|ref|NP_000391.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1 [Homo sapiens]
gi|119540|sp|P18074.1|ERCC2_HUMAN RecName: Full=TFIIH basal transcription factor complex helicase
XPD subunit; AltName: Full=Basic transcription factor 2
80 kDa subunit; Short=BTF2 p80; AltName: Full=CXPD;
AltName: Full=DNA excision repair protein ERCC-2;
AltName: Full=DNA repair protein complementing XP-D
cells; AltName: Full=TFIIH basal transcription factor
complex 80 kDa subunit; Short=TFIIH 80 kDa subunit;
Short=TFIIH p80; AltName: Full=Xeroderma pigmentosum
group D-complementing protein
gi|17939382|gb|AAL48323.1| ERCC2 [Homo sapiens]
gi|82568960|gb|AAI08256.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Homo sapiens]
Length = 760
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|409078986|gb|EKM79348.1| hypothetical protein AGABI1DRAFT_58886 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 867
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 20 EVPSEFP-FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGK 62
E P FP FP+D Y IQ++ M++LY +++ I ESPTGTGK
Sbjct: 6 ETPDVFPAFPYDLPYPIQTDLMRHLYDAIESRCISIVESPTGTGK 50
>gi|355703655|gb|EHH30146.1| hypothetical protein EGK_10751 [Macaca mulatta]
Length = 760
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|83405926|gb|AAI10523.1| ERCC2 protein [Homo sapiens]
Length = 682
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|403299023|ref|XP_003940292.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Saimiri boliviensis boliviensis]
Length = 704
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 34 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 93
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 94 YCSRTVPEIEKVIEELRKL 112
>gi|296234099|ref|XP_002762284.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Callithrix jacchus]
Length = 760
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|146176235|ref|XP_001019889.2| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila]
gi|146144664|gb|EAR99644.2| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila SB210]
Length = 597
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+P + Y IQ MK++ +L K +F+SPTGTGK+L IC L +
Sbjct: 58 FPYP-EPYSIQIESMKSIIKSLCEKKNLLFQSPTGTGKTLVTICSALAY 105
>gi|296234101|ref|XP_002762285.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Callithrix jacchus]
Length = 682
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|397493361|ref|XP_003817576.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Pan paniscus]
Length = 682
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|432894997|ref|XP_004076035.1| PREDICTED: Fanconi anemia group J protein homolog [Oryzias
latipes]
Length = 1273
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q + M ++ L+ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLSMMNSIVRGLNYGQHCLLESPTGSGKSLALLCSTLAW 63
>gi|383862044|ref|XP_003706494.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Megachile rotundata]
Length = 974
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y +Q +M + L N+K G+ ESPTGTGK+
Sbjct: 13 FPFKPYSVQEEYMTKVIECLQNNKNGVLESPTGTGKT 49
>gi|224002519|ref|XP_002290931.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972707|gb|EED91038.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1848
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
+PFP Q +L L NSK + ESPTGTGKS +++C +L W H
Sbjct: 490 WPFP-QVMKPQRQMAIHLIKALKNSKHVVLESPTGTGKSAAILCSVLAWQRFH 541
>gi|428173640|gb|EKX42541.1| hypothetical protein GUITHDRAFT_111516 [Guillardia theta
CCMP2712]
Length = 1115
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FP Y Q M + L N K + E PTG+GKSLSL+C + W
Sbjct: 19 EVNFPHTPYSSQLAMMDKTIFALRNEKNVLLELPTGSGKSLSLLCAVSAW 68
>gi|395854140|ref|XP_003799556.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Otolemur garnettii]
Length = 760
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIIAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|46981234|gb|AAT07552.1| unknown protein [Oryza sativa Japonica Group]
Length = 845
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 39 MKNLYYTLDNS--KFGIFESPTGTGKSLSLICGILKWYSDHKIAG 81
M LY L + + ESPTGTGK+LS+IC L+W DH+ A
Sbjct: 1 MSFLYGALSSGPGALALLESPTGTGKTLSIICSALQWLVDHRDAA 45
>gi|395854142|ref|XP_003799557.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Otolemur garnettii]
Length = 682
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIIAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|378732396|gb|EHY58855.1| DNA repair helicase rad15 [Exophiala dermatitidis NIH/UT8656]
Length = 819
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ + Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ +EK AE+K L
Sbjct: 66 HRKLIYCSRTMSEIEKALAELKAL 89
>gi|405960555|gb|EKC26471.1| Fanconi anemia group J protein [Crassostrea gigas]
Length = 1410
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYS 75
E FP Y Q + M+ + ++ + + ESPTG+GKSL+L+C L W +
Sbjct: 30 EVVFPCKPYPSQFSMMEKVIKGIERRENCLLESPTGSGKSLALLCSALAWQT 81
>gi|340715420|ref|XP_003396211.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 homolog [Bombus terrestris]
Length = 996
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y IQ +M + L N K G+ ESPTGTGK+
Sbjct: 13 FPFKPYSIQEEYMVKVIECLQNGKNGVLESPTGTGKT 49
>gi|156088687|ref|XP_001611750.1| hypothetical protein [Babesia bovis T2Bo]
gi|154799004|gb|EDO08182.1| hypothetical protein BBOV_III006210 [Babesia bovis]
Length = 1062
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 13 KEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILK 72
K QR + V F FP Q + L + L NS+ + ESPTGTGK+ +++ G+
Sbjct: 196 KMQRNIGGVQVLFHFP-TMQKPQIQLLAKLMHALKNSQHVVLESPTGTGKTAAILAGVFS 254
Query: 73 WYSDHKIAGLEKIEAEIK 90
W + I + + K
Sbjct: 255 WMFQNHIRDASMVNTDTK 272
>gi|169763188|ref|XP_001727494.1| DNA repair helicase rad15 [Aspergillus oryzae RIB40]
gi|83770522|dbj|BAE60655.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 794
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ + Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQMHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ +EK AE+K L
Sbjct: 66 HRKLIYCSRTMSEIEKALAELKAL 89
>gi|412990074|emb|CCO20716.1| predicted protein [Bathycoccus prasinos]
Length = 1018
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 2 ASKTPNEDKEFKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTG 61
A++ P+ F P+ +P FP Q M + L + + ESPTGTG
Sbjct: 150 ATQRPDSSNTF----PMMGIPVAFPKGLTPLIPQKIVMSKVLQALKTKQHALVESPTGTG 205
Query: 62 KSLSLICGILKW 73
KSL+L+C L +
Sbjct: 206 KSLALLCASLAF 217
>gi|295671522|ref|XP_002796308.1| DNA repair helicase RAD3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284441|gb|EEH40007.1| DNA repair helicase RAD3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 797
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHKPE 65
Query: 74 -----YSDHKIAGLEKIEAEIKDL 92
Y ++ +EK AE+K L
Sbjct: 66 QRKLIYCSRTMSEIEKALAELKAL 89
>gi|238489069|ref|XP_002375772.1| TFIIH complex helicase Rad3, putative [Aspergillus flavus
NRRL3357]
gi|220698160|gb|EED54500.1| TFIIH complex helicase Rad3, putative [Aspergillus flavus
NRRL3357]
gi|391869618|gb|EIT78813.1| RNA polymerase II transcription initiation [Aspergillus oryzae
3.042]
Length = 794
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ + Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQMHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ +EK AE+K L
Sbjct: 66 HRKLIYCSRTMSEIEKALAELKAL 89
>gi|350414537|ref|XP_003490348.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Bombus impatiens]
Length = 980
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y IQ +M + L N K G+ ESPTGTGK+
Sbjct: 13 FPFKPYSIQEEYMVKVIECLQNGKNGVLESPTGTGKT 49
>gi|5044|emb|CAA45870.1| rhp3+ [Schizosaccharomyces pombe]
Length = 772
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L ++LD + E P+GTGK++SL+ I+ + Y +
Sbjct: 7 DLPILFPYP-RIYPEQYQYMCDLKHSLDAGGIALLEMPSGTGKTISLLSLIVSYQQHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ ++K AE+K L
Sbjct: 66 HRKLIYCSRTMSEIDKALAELKRL 89
>gi|19113937|ref|NP_593025.1| transcription factor TFIIH complex subunit Rad15
[Schizosaccharomyces pombe 972h-]
gi|1709995|sp|P26659.2|RAD15_SCHPO RecName: Full=DNA repair helicase rad15; AltName: Full=Protein
rhp3; AltName: Full=RAD3 homolog
gi|1177345|emb|CAA93221.1| transcription factor TFIIH complex subunit Rad15
[Schizosaccharomyces pombe]
Length = 772
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L ++LD + E P+GTGK++SL+ I+ + Y +
Sbjct: 7 DLPILFPYP-RIYPEQYQYMCDLKHSLDAGGIALLEMPSGTGKTISLLSLIVSYQQHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ ++K AE+K L
Sbjct: 66 HRKLIYCSRTMSEIDKALAELKRL 89
>gi|348532245|ref|XP_003453617.1| PREDICTED: Fanconi anemia group J protein [Oreochromis niloticus]
Length = 1236
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M + L+ ++ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNLIVRGLNTGQYCLLESPTGSGKSLALLCSALGW 63
>gi|322706322|gb|EFY97903.1| DEAD-2 domain-containing protein [Metarhizium anisopliae ARSEF 23]
Length = 924
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 31/91 (34%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNS--KFGIFESPTGT--------------------- 60
+F P+ Y +Q FM+ +Y LD + GI ESPTGT
Sbjct: 20 DFHHPYTPYAVQEQFMRTVYDILDKGEGQVGILESPTGTVCDTFPSMVGIACTWALMTMT 79
Query: 61 --------GKSLSLICGILKWYSDHKIAGLE 83
GKSLSLIC L W + K +E
Sbjct: 80 RLATHTLQGKSLSLICASLTWLRNFKSNKVE 110
>gi|325090321|gb|EGC43631.1| DNA repair helicase RAD3 [Ajellomyces capsulatus H88]
Length = 797
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHQPE 65
Query: 74 -----YSDHKIAGLEKIEAEIKDL 92
Y ++ +EK AE+K L
Sbjct: 66 QRKLIYCSRTMSEIEKALAELKAL 89
>gi|312102845|ref|XP_003150011.1| hypothetical protein LOAG_14466 [Loa loa]
Length = 203
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPT 58
+EF FPF+ YDIQ + M+ + ++ K GI ESPT
Sbjct: 2 AEFLFPFEPYDIQVSLMRTIISCINEGKIGILESPT 37
>gi|393904883|gb|EFO14058.2| hypothetical protein LOAG_14466 [Loa loa]
Length = 213
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPT 58
+EF FPF+ YDIQ + M+ + ++ K GI ESPT
Sbjct: 2 AEFLFPFEPYDIQVSLMRTIISCINEGKIGILESPT 37
>gi|47224934|emb|CAG06504.1| unnamed protein product [Tetraodon nigroviridis]
Length = 862
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNSIIRGLNAGNHCLLESPTGSGKSLALLCSALGW 63
>gi|71020135|ref|XP_760298.1| hypothetical protein UM04151.1 [Ustilago maydis 521]
gi|46100007|gb|EAK85240.1| hypothetical protein UM04151.1 [Ustilago maydis 521]
Length = 850
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
E+P FP+P Y Q +M +L TLD + + E P+GTGK++SL+ I+ +
Sbjct: 7 ELPVLFPYP-KIYPEQYAYMTDLKRTLDANGHCVLEMPSGTGKTVSLLSLIVSYQQFHPA 65
Query: 74 -----YSDHKIAGLEKIEAEIKDL 92
Y + +EK AE+K L
Sbjct: 66 KRKLIYCSRTVPEIEKALAELKRL 89
>gi|453084907|gb|EMF12951.1| DNA repair helicase RAD3 [Mycosphaerella populorum SO2202]
Length = 806
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---Y 74
+ ++P FP+P Y Q +M +L +TLD + E P+GTGK++SL+ I+ + Y
Sbjct: 5 IGDLPVLFPYP-RIYPEQYAYMCDLKHTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHY 63
Query: 75 SDHK--------IAGLEKIEAEIKDL 92
+H+ ++ +EK AE+K L
Sbjct: 64 PEHRKLIYCSRTMSEIEKALAELKAL 89
>gi|399218456|emb|CCF75343.1| unnamed protein product [Babesia microti strain RI]
Length = 824
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLS 65
F PF Y Q F+KN Y +N + G+FESPTG+GK++
Sbjct: 2 FKLPFAPYPGQLEFIKNAYDVFENCEVGLFESPTGSGKTIC 42
>gi|42601324|gb|AAS21351.1| helicase-like protein NHL-like protein [Oikopleura dioica]
Length = 1016
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++K L + ESPTGTGK+L L+ ++ +
Sbjct: 16 FPYDPYPAQEEYIKKCVEALVKRNHAVLESPTGTGKTLCLLASVIAY 62
>gi|343425212|emb|CBQ68748.1| probable RAD3-DNA helicase/ATPase [Sporisorium reilianum SRZ2]
Length = 847
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
E+P FP+P Y Q +M +L TLD + + E P+GTGK++SL+ I+ +
Sbjct: 7 ELPVLFPYP-KIYPEQYAYMTDLKRTLDANGHCVLEMPSGTGKTVSLLSLIVSYQLFHPA 65
Query: 74 -----YSDHKIAGLEKIEAEIKDL 92
Y + +EK AE+K L
Sbjct: 66 KRKLIYCSRTVPEIEKALAELKRL 89
>gi|75858956|ref|XP_868818.1| hypothetical protein AN9436.2 [Aspergillus nidulans FGSC A4]
gi|40747660|gb|EAA66816.1| hypothetical protein AN9436.2 [Aspergillus nidulans FGSC A4]
Length = 797
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS---LSLICGILKWYSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK+ LSLI + Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVTLLSLIVAYQQHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDLEISKNETV--SEDW 104
H+ ++ +EK AE+++L ++E + +ED+
Sbjct: 66 HRKLIYCSRTMSEIEKALAELRELMKFRSEQLGYTEDF 103
>gi|224076637|ref|XP_002196566.1| PREDICTED: Fanconi anemia group J protein homolog [Taeniopygia
guttata]
Length = 1249
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M + L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCKAYPSQLAMMNAIVKGLNSRQHCLLESPTGSGKSLALLCSALSW 63
>gi|449299736|gb|EMC95749.1| hypothetical protein BAUCODRAFT_502978 [Baudoinia compniacensis
UAMH 10762]
Length = 803
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 12/94 (12%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS---LSLICGILKWYSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK+ LSLI ++Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMSDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQFYPE 65
Query: 77 HK--------IAGLEKIEAEIKDLEISKNETVSE 102
H+ ++ +EK AE+K L + + + E
Sbjct: 66 HRKLIYCSRTMSEIEKALAELKALMKYRADQLGE 99
>gi|259488995|tpe|CBF88902.1| TPA: 5' to 3' DNA helicase (Eurofung) [Aspergillus nidulans FGSC
A4]
Length = 791
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS---LSLICGILKWYSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK+ LSLI + Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVTLLSLIVAYQQHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDLEISKNETV--SEDW 104
H+ ++ +EK AE+++L ++E + +ED+
Sbjct: 66 HRKLIYCSRTMSEIEKALAELRELMKFRSEQLGYTEDF 103
>gi|313224365|emb|CBY20154.1| unnamed protein product [Oikopleura dioica]
Length = 976
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++K L + ESPTGTGK+L L+ ++ +
Sbjct: 16 FPYDPYPAQEEYIKKCVEALVKRNHAVLESPTGTGKTLCLLASVIAY 62
>gi|388855689|emb|CCF50677.1| probable RAD3-DNA helicase/ATPase [Ustilago hordei]
Length = 847
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
E+P FP+P Y Q +M +L TLD + + E P+GTGK++SL+ I+ +
Sbjct: 7 ELPVLFPYP-RIYPEQYAYMADLKRTLDANGHCVLEMPSGTGKTVSLLSLIVSYQQFHPA 65
Query: 74 -----YSDHKIAGLEKIEAEIKDL 92
Y + +EK AE+K L
Sbjct: 66 KRKLIYCSRTVPEIEKALAELKRL 89
>gi|168030243|ref|XP_001767633.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681162|gb|EDQ67592.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1378
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKF--------GIFESPTGTGKSLSLICGILKW 73
FP+ Y Q FM + L+ S+ + ESPTG+GK+L+L+C L W
Sbjct: 17 FPYKPYGTQLAFMGKVLAALEQSRHSHRSCSVNALLESPTGSGKTLALLCATLAW 71
>gi|44889982|emb|CAF32100.1| DNA repair helicase, putative [Aspergillus fumigatus]
Length = 767
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ + Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ +EK AE+K+L
Sbjct: 66 HRKLIYCSRTMSEIEKALAELKEL 89
>gi|443898496|dbj|GAC75831.1| RNA polymerase II transcription initiation/nucleotide excision
repair factor TFIIH, 5'-3' helicase subunit RAD3
[Pseudozyma antarctica T-34]
Length = 851
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
E+P FP+P Y Q +M +L TLD + + E P+GTGK++SL I+ +
Sbjct: 7 ELPVLFPYP-KIYPEQYAYMTDLKRTLDANGHCVLEMPSGTGKTVSLFSLIVSYQLFHPA 65
Query: 74 -----YSDHKIAGLEKIEAEIKDL 92
Y + +EK AE+K L
Sbjct: 66 KRKLIYCSRTVPEIEKALAELKRL 89
>gi|119495148|ref|XP_001264365.1| TFIIH complex helicase Rad3, putative [Neosartorya fischeri NRRL
181]
gi|119412527|gb|EAW22468.1| TFIIH complex helicase Rad3, putative [Neosartorya fischeri NRRL
181]
Length = 794
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ + Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ +EK AE+K+L
Sbjct: 66 HRKLIYCSRTMSEIEKALAELKEL 89
>gi|345487716|ref|XP_001605873.2| PREDICTED: Fanconi anemia group J protein homolog [Nasonia
vitripennis]
Length = 950
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A VP FP Y Q + M + + + ESPTG+GK+L+L+C L W
Sbjct: 175 IAGVP--VKFPVSPYRSQISVMNAVIKGCKGKEHCLLESPTGSGKTLALLCAALGW 228
>gi|452981603|gb|EME81363.1| hypothetical protein MYCFIDRAFT_189512 [Pseudocercospora
fijiensis CIRAD86]
Length = 776
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---Y 74
+ ++P FP+P Y Q +M L TLD+ + E P+GTGK++SL+ I+ + Y
Sbjct: 5 IGDLPVLFPYP-RIYPEQYEYMCALKQTLDSGGHCVLEMPSGTGKTVSLLSLIVAYQQHY 63
Query: 75 SDHK--------IAGLEKIEAEIKDL 92
+H+ ++ +EK AE+K L
Sbjct: 64 PEHRKLIYCSRTMSEIEKALAELKAL 89
>gi|345563336|gb|EGX46339.1| hypothetical protein AOL_s00110g163 [Arthrobotrys oligospora ATCC
24927]
Length = 920
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 19 AEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPT-------GTGKSLSLICGIL 71
A +F P+ Y IQ +FM LY L++ + +P +GKSLSLICG L
Sbjct: 13 AAFQRDFHHPYTPYPIQLDFMNALYEVLEDGS-ERYTTPIESLRVIFSSGKSLSLICGSL 71
Query: 72 KWYSDHK 78
W +HK
Sbjct: 72 TWLREHK 78
>gi|336364077|gb|EGN92441.1| hypothetical protein SERLA73DRAFT_99245 [Serpula lacrymans var.
lacrymans S7.3]
Length = 793
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q +M +L TLD + + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQFYPTRRKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDL---EISKNETVSEDWIEQ 107
+ +EK AE+K L IS ET E EQ
Sbjct: 72 CSRTVPEIEKALAELKRLVEYRISCAETPEEKEKEQ 107
>gi|170087262|ref|XP_001874854.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650054|gb|EDR14295.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 759
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q +M +L TLD + + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQFYPTRRKLVY 71
Query: 75 SDHKIAGLEKIEAEIKDL---EISKNETVSE 102
+ +EK AE+K L IS ET E
Sbjct: 72 CSRTVPEIEKALAELKRLMAYRISHAETPEE 102
>gi|47221017|emb|CAG12711.1| unnamed protein product [Tetraodon nigroviridis]
Length = 759
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 11 FPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQKAFPLEVTKLI 70
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 71 YCSRTVPEIEKVVEELRKL 89
>gi|338710190|ref|XP_001500524.3| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Equus caballus]
Length = 785
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 40 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 99
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 100 YCSRTVPEIEKVIEELRKL 118
>gi|301097762|ref|XP_002897975.1| TFIIH basal transcription factor complex helicase subunit
[Phytophthora infestans T30-4]
gi|262106420|gb|EEY64472.1| TFIIH basal transcription factor complex helicase subunit
[Phytophthora infestans T30-4]
Length = 763
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAG 81
E FP++ Y Q +M+ L LD + E PTGTGK++SL+ +L + + H AG
Sbjct: 9 EVVFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAYKAAHPTAG 67
>gi|320593951|gb|EFX06354.1| tfiih complex helicase [Grosmannia clavigera kw1407]
Length = 793
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
++P FP+P Y + +++M +L TLD + + E P+GTGK++SL+ I+ +
Sbjct: 7 DLPILFPYP-RIYPVSNSYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVAYQQYYPG 65
Query: 74 -----YSDHKIAGLEKIEAEIKDL 92
Y ++ +EK AE+K L
Sbjct: 66 QRKLIYCSRTMSEIEKALAELKAL 89
>gi|412985226|emb|CCO20251.1| regulator of telomere elongation helicase 1 [Bathycoccus
prasinos]
Length = 1313
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
+FPFP + Y Q M+ + + L + ESPTGTGK++ L+C L +++H
Sbjct: 27 KFPFP-EPYPSQIVMMEKILFALREGTNALLESPTGTGKTVCLLCATLA-FAEH 78
>gi|145355132|ref|XP_001421822.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582061|gb|ABP00116.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 849
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 39 MKNLYYTLDN-SKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKD 91
M+++Y + + FG FESPTGTGK+LS++ + W D + A L + + +D
Sbjct: 1 MRHIYDACERRATFGAFESPTGTGKTLSVLIAAMSWIDDRRRARLAGTKLDDED 54
>gi|347365666|gb|AEO89688.1| ercc2 [Danio rerio]
Length = 760
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 15/94 (15%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQKTYPLEVTKLV 71
Query: 74 YSDHKIAGLEKIEAEIKDLE--ISKNETVSEDWI 105
Y + +EK+ E++ L SK V D++
Sbjct: 72 YCSRTVPEIEKVVEELRKLMDYYSKQTGVKNDFL 105
>gi|209736390|gb|ACI69064.1| TFIIH basal transcription factor complex helicase subunit [Salmo
salar]
Length = 319
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQREYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVVEELRKL 90
>gi|344269323|ref|XP_003406502.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Loxodonta africana]
Length = 845
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 94 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 153
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 154 YCSRTVPEIEKVIEELRKL 172
>gi|134107760|ref|XP_777491.1| hypothetical protein CNBB0650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260183|gb|EAL22844.1| hypothetical protein CNBB0650 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 883
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 17 PLAEVPSEFPFPF-DAYDIQSNFMKNLYYTLDNSKFGIF---ESPTGTGK 62
P P FPFP+ YDIQ + M+ ++ +++ K I ESPTGTGK
Sbjct: 11 PCLPTPETFPFPYPKPYDIQLDLMRVVFRAIEDGKIAIIGQVESPTGTGK 60
>gi|58258935|ref|XP_566880.1| general RNA polymerase II transcription factor [Cryptococcus
neoformans var. neoformans JEC21]
gi|134107057|ref|XP_777841.1| hypothetical protein CNBA5380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260539|gb|EAL23194.1| hypothetical protein CNBA5380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223017|gb|AAW41061.1| general RNA polymerase II transcription factor, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 799
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---- 73
L ++P FP+ Y Q ++M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 5 LGDLPVLFPYD-RLYPEQYSYMADLKTTLDAGGHCVLEMPSGTGKTVSLLSLIIAYMQFY 63
Query: 74 -------YSDHKIAGLEKIEAEIKDLEISKNETVSED 103
Y + +EK AE+K L + + E + D
Sbjct: 64 PNKRKLIYCSRTVPEIEKALAELKRLMMYRAEMGAND 100
>gi|389748846|gb|EIM90023.1| DNA repair helicase [Stereum hirsutum FP-91666 SS1]
Length = 802
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q +M +L TLD + + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQFFPTKRKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDL---EISKNETVSEDWIEQQSF 110
+ +EK AE++ L IS+ ET E +++Q F
Sbjct: 72 CSRTVPEIEKALAELRRLMEYRISQAET-EEQRVKEQGF 109
>gi|408395822|gb|EKJ74995.1| hypothetical protein FPSE_04815 [Fusarium pseudograminearum
CS3096]
Length = 789
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQYMPE 65
Query: 74 -----YSDHKIAGLEKIEAEIKDL 92
Y ++ +EK E+K L
Sbjct: 66 KRKLIYCSRTMSEIEKALVELKSL 89
>gi|378756742|gb|EHY66766.1| hypothetical protein NERG_00406 [Nematocida sp. 1 ERTm2]
Length = 690
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
++ Y+ Q ++ + LDN + G+ ESPTGTGK+LS++ ++ W
Sbjct: 15 YELYEPQRKSIETILTCLDNGESGMIESPTGTGKTLSILEAVVAW 59
>gi|345785629|ref|XP_541562.3| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit [Canis lupus familiaris]
Length = 760
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|146741362|dbj|BAF62336.1| DNA-repair protein complementing XP-D cells [Sus scrofa]
Length = 756
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 8 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 67
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 68 YCSRTVPEIEKVIEELRKL 86
>gi|119936449|gb|ABM06129.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 protein [Bos taurus]
Length = 773
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 25 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 84
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 85 YCSRTVPEIEKVIEELRKL 103
>gi|41055526|ref|NP_957220.1| TFIIH basal transcription factor complex helicase subunit [Danio
rerio]
gi|29437217|gb|AAH49410.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Danio rerio]
Length = 643
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 15/94 (15%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQKTYPLEVTKLV 71
Query: 74 YSDHKIAGLEKIEAEIKDLE--ISKNETVSEDWI 105
Y + +EK+ E++ L SK V D++
Sbjct: 72 YCSRTVPEIEKVVEELRKLMDYYSKQTGVKNDFL 105
>gi|66362610|ref|XP_628271.1| RAD3'DEXDc+HELICc protein' [Cryptosporidium parvum Iowa II]
gi|46229591|gb|EAK90409.1| RAD3'DEXDc+HELICc protein' [Cryptosporidium parvum Iowa II]
Length = 841
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 12/81 (14%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW--------- 73
E FP+D Y Q +MK L LD G+ E PTGTGK+++L+ I +
Sbjct: 10 EVFFPYDNVYPEQLEYMKYLKQILDAHSHGVLEMPTGTGKTVTLLSFITSYQLVHPNMGK 69
Query: 74 --YSDHKIAGLEKIEAEIKDL 92
Y +A +EK E+K +
Sbjct: 70 LIYCTRTVAEMEKALQELKTV 90
>gi|449328753|gb|AGE95029.1| ATP dependent DNA binding helicase [Encephalitozoon cuniculi]
Length = 619
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 30 DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
+ YD+Q +++ +D GIF SPTGTGK++SL+ ++ + + AGL+
Sbjct: 5 ELYDVQKLLIRDARRVIDEGTAGIFSSPTGTGKTMSLLSAVIDYIGADE-AGLD 57
>gi|19173439|ref|NP_597242.1| ATP DEPENDENT DNA BINDING HELICASE (RAD3/XPD SUBFAMILY OF
HELICASES) [Encephalitozoon cuniculi GB-M1]
gi|19171028|emb|CAD26418.1| ATP DEPENDENT DNA BINDING HELICASE (RAD3/XPD SUBFAMILY OF
HELICASES) [Encephalitozoon cuniculi GB-M1]
Length = 619
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 30 DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
+ YD+Q +++ +D GIF SPTGTGK++SL+ ++ + + AGL+
Sbjct: 5 ELYDVQKLLIRDARRVIDEGTAGIFSSPTGTGKTMSLLSAVIDYIGADE-AGLD 57
>gi|389638466|ref|XP_003716866.1| DNA repair helicase rad15 [Magnaporthe oryzae 70-15]
gi|351642685|gb|EHA50547.1| DNA repair helicase rad15 [Magnaporthe oryzae 70-15]
Length = 795
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS---LSLICGILKWYSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK+ LSLI + Y +
Sbjct: 7 DLPVIFPYP-RIYPEQYAYMCDLKKTLDVGGNCVLEMPSGTGKTATLLSLIVAYQQHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ +EK AE+K+L
Sbjct: 66 HRKLIYCSRTMSEIEKALAELKNL 89
>gi|67601888|ref|XP_666434.1| DNA repair protein-related [Cryptosporidium hominis TU502]
gi|54657424|gb|EAL36199.1| DNA repair protein-related [Cryptosporidium hominis]
Length = 841
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 12/81 (14%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW--------- 73
E FP+D Y Q +MK L LD G+ E PTGTGK+++L+ I +
Sbjct: 10 EVFFPYDNVYPEQLEYMKYLKQILDAHSHGVLEMPTGTGKTVTLLSFITSYQLVHPNMGK 69
Query: 74 --YSDHKIAGLEKIEAEIKDL 92
Y +A +EK E+K +
Sbjct: 70 LIYCTRTVAEMEKALQELKTV 90
>gi|410982712|ref|XP_003997692.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Felis catus]
Length = 760
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|348557833|ref|XP_003464723.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Cavia porcellus]
Length = 760
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|444730736|gb|ELW71110.1| TFIIH basal transcription factor complex helicase XPD subunit
[Tupaia chinensis]
Length = 732
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|403358712|gb|EJY79009.1| Fanconi anemia group J protein [Oxytricha trifallax]
Length = 965
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
E FP Y +Q +M + N+K+ E PTGTGK+LSL+ L + + + L
Sbjct: 104 EIKFPKIPYKVQEEYMTLAVKAIKNNKYAALEMPTGTGKTLSLLSSTLAFIDQYNQSNLS 163
Query: 84 KIEAEIKDLEISKNET 99
+ ++K + S+ +
Sbjct: 164 TQKQKLKLIYTSRTHS 179
>gi|255078886|ref|XP_002503023.1| predicted protein [Micromonas sp. RCC299]
gi|226518289|gb|ACO64281.1| predicted protein [Micromonas sp. RCC299]
Length = 1566
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 11/101 (10%)
Query: 16 RPLAEVPSEFPFPFDAYDI----QSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
RP PS PFP + +I M + D + + ESPTG+GKSL+L+C L
Sbjct: 9 RPHCWHPSRLPFP-EPLNIVPHSHQGVMGKVLKAADAGENALLESPTGSGKSLALLCSAL 67
Query: 72 KWYSDHKIAGLEKIEAEIKDLEISKNETVSEDWIEQQSFEP 112
W K L ++ + ++++ E WI S +P
Sbjct: 68 AWQERWKRDNL-GVKFGVNNVKVD-----DEGWIVPSSGDP 102
>gi|429327451|gb|AFZ79211.1| hypothetical protein BEWA_020580 [Babesia equi]
Length = 1094
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 35 QSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
Q + L Y L + + ESPTGTGK+ ++I G+L W +I E
Sbjct: 224 QLQILSKLIYALKTNGHAVLESPTGTGKTAAIISGVLSWLYQSQITNTE 272
>gi|426243940|ref|XP_004015798.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Ovis aries]
Length = 759
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 52 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 111
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 112 YCSRTVPEIEKVIEELRKL 130
>gi|157168345|ref|NP_001096787.1| TFIIH basal transcription factor complex helicase XPD subunit
[Bos taurus]
gi|182645388|sp|A6QLJ0.1|ERCC2_BOVIN RecName: Full=TFIIH basal transcription factor complex helicase
XPD subunit; AltName: Full=CXPD; AltName: Full=DNA
excision repair protein ERCC-2; AltName: Full=DNA
repair protein complementing XP-D cells; AltName:
Full=Xeroderma pigmentosum group D-complementing
protein
gi|151556394|gb|AAI47983.1| ERCC2 protein [Bos taurus]
gi|296477395|tpg|DAA19510.1| TPA: TFIIH basal transcription factor complex helicase subunit
[Bos taurus]
Length = 760
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|351706985|gb|EHB09904.1| TFIIH basal transcription factor complex helicase subunit,
partial [Heterocephalus glaber]
Length = 759
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL--KW---------- 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +W
Sbjct: 11 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQWAYPLEVTKLI 70
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 71 YCSRTVPEIEKVIEELRKL 89
>gi|353227556|emb|CCA78059.1| probable RAD3-DNA helicase/ATPase [Piriformospora indica DSM 11827]
Length = 798
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q +M +L TLD S + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDKIYPEQYKYMCDLKRTLDASGHCVLEMPSGTGKTVSLLSLIVSYQQFFPTKRKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDLEISKNETVSED 103
+ +EK E+K L + E+ D
Sbjct: 72 CSRTVPEIEKALTELKRLMKYRIESAETD 100
>gi|334328785|ref|XP_003341121.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Monodelphis
domestica]
Length = 807
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 59 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTISLLALIVAYQRVHPLEVTKLI 118
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 119 YCSRTVPEIEKVIEELRKL 137
>gi|403375820|gb|EJY87881.1| hypothetical protein OXYTRI_22467 [Oxytricha trifallax]
Length = 645
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP Y++Q ++M + N+KF + PTGTGK+LSL+ L +
Sbjct: 67 FPNVPYNVQVDYMTQAVKAIKNNKFAALDMPTGTGKTLSLLSSTLAF 113
>gi|154281191|ref|XP_001541408.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411587|gb|EDN06975.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 501
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 23/38 (60%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPT 58
V F PF YDIQ FM+ L+ ++ K GIFESPT
Sbjct: 4 VEKNFHHPFIPYDIQRQFMQALFDCIEGGKVGIFESPT 41
>gi|604371|gb|AAA85822.1| ERCC2/XPD [Xiphophorus maculatus]
Length = 760
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQRAFPLDVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL-EISKNET 99
Y + +EK+ E++ L E ET
Sbjct: 72 YCSRTVPEIEKVVEELRKLMEFYAKET 98
>gi|5022|emb|CAA43022.1| rad15 [Schizosaccharomyces pombe]
Length = 772
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L ++LD + E P+GTGK++SL+ I+ + Y +
Sbjct: 7 DLPILFPYP-RIYPEQYQYMCDLKHSLDAGGIALLEMPSGTGKTISLLSLIVSYQQHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ ++K AE+K L
Sbjct: 66 HRKLIYCSRTMSEIDKALAELKRL 89
>gi|328714717|ref|XP_001943091.2| PREDICTED: Fanconi anemia group J protein homolog isoform 1
[Acyrthosiphon pisum]
Length = 918
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
P Y Q + M + + + ESPTG+GK+L+L+C L W K A LEK+
Sbjct: 23 MPVRPYPSQVSMMDKVIRGCQRQQNCLLESPTGSGKTLALLCSALAWQKAEK-ARLEKLS 81
Query: 87 AE 88
E
Sbjct: 82 EE 83
>gi|328714715|ref|XP_003245432.1| PREDICTED: Fanconi anemia group J protein homolog isoform 2
[Acyrthosiphon pisum]
Length = 912
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
P Y Q + M + + + ESPTG+GK+L+L+C L W K A LEK+
Sbjct: 23 MPVRPYPSQVSMMDKVIRGCQRQQNCLLESPTGSGKTLALLCSALAWQKAEK-ARLEKLS 81
Query: 87 AE 88
E
Sbjct: 82 EE 83
>gi|396081915|gb|AFN83529.1| Rad3-like ATP dependent DNA binding helicase [Encephalitozoon
romaleae SJ-2008]
Length = 617
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 30 DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+ Y+ Q F+K+ +D GIF SPTGTGK++SL+ ++ +
Sbjct: 5 ELYEGQKQFIKDAKKIVDGEAVGIFSSPTGTGKTMSLLSAVVDY 48
>gi|303289154|ref|XP_003063865.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454933|gb|EEH52238.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 668
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 29/62 (46%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
P+ V FP + Q M + L + + ESPTGTGKSLSL+C L W
Sbjct: 249 PMGGVVVHFPAGLTPHVPQKITMSKVIAALQKRQNALVESPTGTGKSLSLLCSALAWQEA 308
Query: 77 HK 78
K
Sbjct: 309 KK 310
>gi|348537926|ref|XP_003456443.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Oreochromis niloticus]
Length = 760
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQRAFPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL-EISKNET 99
Y + +EK+ E++ L E ET
Sbjct: 72 YCSRTVPEIEKVVEELRKLMEFYTKET 98
>gi|432891078|ref|XP_004075537.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Oryzias latipes]
Length = 665
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQKAFPLDVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL-EISKNET 99
Y + +EK+ E++ L E ET
Sbjct: 72 YCSRTVPEIEKVVEELRKLMEFYAKET 98
>gi|118346503|ref|XP_976906.1| hypothetical protein TTHERM_00030090 [Tetrahymena thermophila]
gi|89288497|gb|EAR86485.1| hypothetical protein TTHERM_00030090 [Tetrahymena thermophila
SB210]
Length = 1236
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 27 FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICG 69
FP+D YD Q MK + L N + +F+SPTGTGKSL ++C
Sbjct: 8 FPYDNPYDQQIESMKIILDILSNKQNLLFQSPTGTGKSLMVMCA 51
>gi|392575737|gb|EIW68869.1| hypothetical protein TREMEDRAFT_30972 [Tremella mesenterica DSM
1558]
Length = 796
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 12/89 (13%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q ++M +L TLD + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYSYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVSYMQFYPVKRKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDLEISKNETVSED 103
+ +EK AE+K L + E ++D
Sbjct: 72 CSRTVPEIEKALAELKRLMEYRVEMGAKD 100
>gi|350631746|gb|EHA20117.1| ATP-dependent DNA helicase-like protein [Aspergillus niger ATCC
1015]
Length = 987
Score = 42.0 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSL 66
++F P+ YDIQ M+ LY L+ K +FESPTG S L
Sbjct: 6 NDFHHPYSPYDIQLQLMRALYSCLEQGKVAVFESPTGKRISFVL 49
>gi|213511929|ref|NP_001133411.1| TFIIH basal transcription factor complex helicase subunit [Salmo
salar]
gi|209153902|gb|ACI33183.1| TFIIH basal transcription factor complex helicase subunit [Salmo
salar]
Length = 760
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQREYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL-EISKNET 99
Y + +EK+ E++ L E ET
Sbjct: 72 YCSRTVPEIEKVVEELRKLMEFYSKET 98
>gi|410910536|ref|XP_003968746.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Takifugu rubripes]
Length = 760
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQKAFPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVVEELRKL 90
>gi|384253341|gb|EIE26816.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 771
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q +M L + LD + E PTGTGK+++L+ I + Y
Sbjct: 12 FPYDYIYPEQFQYMLELKHALDAKGHCLLEMPTGTGKTITLLSLITSYQLAHPEVGKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDL 92
+ +EK+ AE+K+L
Sbjct: 72 CTRTVPEMEKVLAELKEL 89
>gi|348678980|gb|EGZ18797.1| hypothetical protein PHYSODRAFT_354695 [Phytophthora sojae]
Length = 791
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAG 81
E FP++ Y Q +M+ L LD + E PTGTGK++SL+ +L + H AG
Sbjct: 9 EVLFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLALVLAYKHAHPTAG 67
>gi|346986337|ref|NP_001231320.1| TFIIH basal transcription factor complex helicase XPD subunit
[Cricetulus griseus]
gi|2495145|sp|Q60452.1|ERCC2_CRIGR RecName: Full=TFIIH basal transcription factor complex helicase
XPD subunit; AltName: Full=CXPD; AltName: Full=DNA
excision repair protein ERCC-2; AltName: Full=DNA
repair protein complementing XP-D cells; AltName:
Full=Xeroderma pigmentosum group D-complementing
protein
gi|604908|gb|AAC13749.1| nucleotide excision repair protein [Cricetulus griseus]
Length = 760
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQRAFPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|2114484|gb|AAB58296.1| DNA helicase [Mus musculus]
Length = 760
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|340056962|emb|CCC51301.1| putative DNA repair helicase, fragment [Trypanosoma vivax Y486]
Length = 1251
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 26 PFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
PFPF+ Y +Q + M+++ L + ESPTGTGK+ L+ G+L
Sbjct: 29 PFPFEPYPLQLHAMESIRSGLAAGDVVVLESPTGTGKTQVLLNGVL 74
>gi|31542614|ref|NP_031975.2| TFIIH basal transcription factor complex helicase XPD subunit
[Mus musculus]
gi|341940664|sp|O08811.2|ERCC2_MOUSE RecName: Full=TFIIH basal transcription factor complex helicase
XPD subunit; AltName: Full=CXPD; AltName: Full=DNA
excision repair protein ERCC-2; AltName: Full=DNA
repair protein complementing XP-D cells; AltName:
Full=Xeroderma pigmentosum group D-complementing
protein
gi|26349935|dbj|BAC38607.1| unnamed protein product [Mus musculus]
gi|148691193|gb|EDL23140.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Mus musculus]
Length = 760
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|289802977|ref|NP_001166280.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Rattus norvegicus]
gi|149056774|gb|EDM08205.1| rCG54110 [Rattus norvegicus]
Length = 760
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
>gi|327270747|ref|XP_003220150.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Anolis
carolinensis]
Length = 1271
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Query: 9 DKEFKEQRPLAEVPSEFP-----FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
+KEFK RP+ E+P++F FP+ Y IQS + +L YT N + +PTG+GK+
Sbjct: 25 EKEFKALRPVTEIPAQFRNIFKEFPYFNY-IQSKALDDLLYTDRNF---VIRAPTGSGKT 80
Query: 64 L 64
+
Sbjct: 81 V 81
>gi|213402977|ref|XP_002172261.1| DNA repair helicase RAD3 [Schizosaccharomyces japonicus yFS275]
gi|212000308|gb|EEB05968.1| DNA repair helicase RAD3 [Schizosaccharomyces japonicus yFS275]
Length = 773
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
++P FP+P Y Q +M +L +LD + E P+GTGK++SL+ I+ +
Sbjct: 7 DLPVIFPYP-RIYPEQYQYMCDLKKSLDVGGVALLEMPSGTGKTISLLSLIISYQQFYPE 65
Query: 74 -----YSDHKIAGLEKIEAEIKDL 92
Y ++ ++K AE+K L
Sbjct: 66 QRKLIYCSRTMSEIDKALAELKRL 89
>gi|429962537|gb|ELA42081.1| hypothetical protein VICG_00930 [Vittaforma corneae ATCC 50505]
Length = 599
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGI 70
E+ F Y Q ++++ T++ K I SPTGTGK+LSL+C +
Sbjct: 2 EYGFSRKLYPSQIKLIQDVINTINQKKMAIVSSPTGTGKTLSLLCAL 48
>gi|406702333|gb|EKD05364.1| hypothetical protein A1Q2_00323 [Trichosporon asahii var. asahii
CBS 8904]
Length = 668
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 12/58 (20%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGI------------FESPTGTGK 62
P + P+ FPFP+ Y IQ + MK ++ +++ K I SPTGTGK
Sbjct: 28 PHLDTPTSFPFPYTPYQIQLDLMKTVFGAIEDGKIAIVGLHRSDSTDVQVSSPTGTGK 85
>gi|308806570|ref|XP_003080596.1| putative BRCA1 interacting protein C-terminal helicase 1 (ISS)
[Ostreococcus tauri]
gi|116059057|emb|CAL54764.1| putative BRCA1 interacting protein C-terminal helicase 1 (ISS)
[Ostreococcus tauri]
Length = 1045
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E FP Y Q M + + + + + ESPTG+GKSL+L+C L W
Sbjct: 45 EIRFPLVPYASQIAVMSQVIRAVTSKQCALVESPTGSGKSLALLCSALAW 94
>gi|254578942|ref|XP_002495457.1| ZYRO0B11836p [Zygosaccharomyces rouxii]
gi|238938347|emb|CAR26524.1| ZYRO0B11836p [Zygosaccharomyces rouxii]
Length = 770
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q ++M +L TLD+ I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYHYMCDLKRTLDSGGNSILEMPSGTGKTVSLLSLTIAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|261332362|emb|CBH15357.1| DNA repair helicase, putative [Trypanosoma brucei gambiense
DAL972]
Length = 1056
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 26 PFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKI 85
PFPF+ Y +Q + M+ + L + ESPTGTGK+ L+ G+L + + +E
Sbjct: 10 PFPFEPYPLQLHAMEAIREGLSAGDVVVLESPTGTGKTQILLNGVLSHMFEPVVTSVEHG 69
Query: 86 EAE 88
AE
Sbjct: 70 IAE 72
>gi|115492105|ref|XP_001210680.1| DNA repair helicase RAD3 [Aspergillus terreus NIH2624]
gi|114197540|gb|EAU39240.1| DNA repair helicase RAD3 [Aspergillus terreus NIH2624]
Length = 790
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ + Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQLHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ +EK AE+K L
Sbjct: 66 HRKLIYCSRTMSEIEKALAELKAL 89
>gi|451850440|gb|EMD63742.1| hypothetical protein COCSADRAFT_37505 [Cochliobolus sativus
ND90Pr]
Length = 798
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------- 73
+P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 8 LPVLFPYP-RVYPEQYAYMCDLKRTLDQGGHCVLEMPSGTGKTVSLLSLIIAYQQHYPEK 66
Query: 74 ----YSDHKIAGLEKIEAEIKDL 92
Y ++ +EK AE+K L
Sbjct: 67 RKLIYCSRTMSEIEKALAELKAL 89
>gi|401625969|gb|EJS43941.1| rad3p [Saccharomyces arboricola H-6]
Length = 777
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q N+M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYNYMCDIKRTLDVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|401887275|gb|EJT51272.1| hypothetical protein A1Q1_07550 [Trichosporon asahii var. asahii
CBS 2479]
Length = 668
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 12/58 (20%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGI------------FESPTGTGK 62
P + P+ FPFP+ Y IQ + MK ++ +++ K I SPTGTGK
Sbjct: 28 PHLDTPTSFPFPYTPYQIQLDLMKTVFGAIEDGKIAIVGLHRSDSTDVQVSSPTGTGK 85
>gi|452000477|gb|EMD92938.1| hypothetical protein COCHEDRAFT_1133207 [Cochliobolus
heterostrophus C5]
Length = 799
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------- 73
+P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 8 LPVLFPYP-RVYPEQYAYMCDLKRTLDQGGHCVLEMPSGTGKTVSLLSLIIAYQQHYPEK 66
Query: 74 ----YSDHKIAGLEKIEAEIKDL 92
Y ++ +EK AE+K L
Sbjct: 67 RKLIYCSRTMSEIEKALAELKAL 89
>gi|71747098|ref|XP_822604.1| DNA repair helicase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832272|gb|EAN77776.1| DNA repair helicase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1056
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 26 PFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKI 85
PFPF+ Y +Q + M+ + L + ESPTGTGK+ L+ G+L + + +E
Sbjct: 10 PFPFEPYPLQLHAMEAIREGLSAGDVVVLESPTGTGKTQILLNGVLSHMFEPVVTSVEHG 69
Query: 86 EAE 88
AE
Sbjct: 70 IAE 72
>gi|358370846|dbj|GAA87456.1| DNA repair helicase RAD3 [Aspergillus kawachii IFO 4308]
Length = 801
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ + Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ +EK AE+K L
Sbjct: 66 HRKLIYCSRTMSEIEKALAELKAL 89
>gi|300176870|emb|CBK25439.2| unnamed protein product [Blastocystis hominis]
Length = 1177
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
EFP + Q + M + +L ++ I ESPTGTGK+L+++C L W
Sbjct: 54 EFPQDRIPFSSQKSTMTAIVKSLSRNENAIVESPTGTGKTLAILCSSLSW 103
>gi|50293749|ref|XP_449286.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528599|emb|CAG62260.1| unnamed protein product [Candida glabrata]
Length = 775
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M+++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYQYMRDIKRTLDAGGNSILEMPSGTGKTVSLLSLTIAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|308485824|ref|XP_003105110.1| CRE-DOG-1 protein [Caenorhabditis remanei]
gi|308257055|gb|EFP01008.1| CRE-DOG-1 protein [Caenorhabditis remanei]
Length = 1008
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 15 QRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI---CGIL 71
Q + VP +P Y Q + + + NS+ + ESPTG+GK+++L+ C L
Sbjct: 72 QLMMQSVPVRYPKGLTLYPTQKLMIVRIIKAIQNSENVLGESPTGSGKTMALLSSTCAWL 131
Query: 72 KWYSDHKIAGLEK 84
K Y D K EK
Sbjct: 132 KQYMDQKKESREK 144
>gi|330947928|ref|XP_003307004.1| hypothetical protein PTT_20325 [Pyrenophora teres f. teres 0-1]
gi|311315183|gb|EFQ84891.1| hypothetical protein PTT_20325 [Pyrenophora teres f. teres 0-1]
Length = 796
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------- 73
+P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 8 LPVLFPYP-RVYPEQYAYMCDLKRTLDQGGHCVLEMPSGTGKTVSLLSLIVAYQQHYPEK 66
Query: 74 ----YSDHKIAGLEKIEAEIKDL 92
Y ++ +EK AE+K L
Sbjct: 67 RKLIYCSRTMSEIEKALAELKAL 89
>gi|429962084|gb|ELA41628.1| hypothetical protein VICG_01376 [Vittaforma corneae ATCC 50505]
Length = 657
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+P E P+ + Y Q + L + + ESPTGTGKSLS++C +L +Y K
Sbjct: 9 IPVEIPY--EPYPPQLVTISKLIECFQTNTNALIESPTGTGKSLSILCSVLAFYEQEK 64
>gi|396473579|ref|XP_003839371.1| similar to TFIIH basal transcription factor complex helicase
subunit [Leptosphaeria maculans JN3]
gi|312215940|emb|CBX95892.1| similar to TFIIH basal transcription factor complex helicase
subunit [Leptosphaeria maculans JN3]
Length = 792
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 21 VPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------- 73
+P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 8 LPVLFPYP-RVYPEQYAYMCDLKRTLDQGGHCVLEMPSGTGKTVSLLSLIVAYQQHYPEK 66
Query: 74 ----YSDHKIAGLEKIEAEIKDL 92
Y ++ +EK AE+K L
Sbjct: 67 RKLIYCSRTMSEIEKALAELKAL 89
>gi|350629867|gb|EHA18240.1| DNA repair helicase, subunit of TFIIH [Aspergillus niger ATCC
1015]
Length = 811
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ + Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ +EK AE+K L
Sbjct: 66 HRKLIYCSRTMSEIEKALAELKAL 89
>gi|209879600|ref|XP_002141240.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
gi|209556846|gb|EEA06891.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
Length = 835
Score = 41.2 bits (95), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW--------- 73
E FP+D Y Q +MK L LD G+ E PTGTGK+++L I +
Sbjct: 10 EVFFPYDYVYPEQLEYMKYLKQILDAHSHGVLEMPTGTGKTVTLFSFITSYQLAHPNLGR 69
Query: 74 --YSDHKIAGLEKIEAEIKDL 92
Y +A +EK E+K +
Sbjct: 70 LIYCTRTVAEMEKALLELKTV 90
>gi|145240349|ref|XP_001392821.1| DNA repair helicase rad15 [Aspergillus niger CBS 513.88]
gi|134077338|emb|CAK39953.1| unnamed protein product [Aspergillus niger]
Length = 801
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ + Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ +EK AE+K L
Sbjct: 66 HRKLIYCSRTMSEIEKALAELKAL 89
>gi|432108806|gb|ELK33414.1| TFIIH basal transcription factor complex helicase XPD subunit,
partial [Myotis davidii]
Length = 600
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAY 59
>gi|425770095|gb|EKV08569.1| TFIIH complex helicase Rad3, putative [Penicillium digitatum Pd1]
gi|425771642|gb|EKV10079.1| TFIIH complex helicase Rad3, putative [Penicillium digitatum
PHI26]
Length = 794
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ + Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ +EK AE+K L
Sbjct: 66 HRKLIYCSRTMSEIEKALAELKAL 89
>gi|393220578|gb|EJD06064.1| DNA repair helicase [Fomitiporia mediterranea MF3/22]
Length = 800
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q +M +L TLD S + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYQYMCDLKRTLDASGHCVLEMPSGTGKTVSLLSLIVSYQQFYPTKRKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDL---EISKNETVSE 102
+ +EK AE+K L I ET E
Sbjct: 72 CSRTVPEIEKALAELKRLMEYRIQHAETEEE 102
>gi|190405726|gb|EDV08993.1| DNA repair helicase RAD3 [Saccharomyces cerevisiae RM11-1a]
gi|207345787|gb|EDZ72494.1| YER171Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 780
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q N+M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|398365073|ref|NP_011098.3| Rad3p [Saccharomyces cerevisiae S288c]
gi|131812|sp|P06839.1|RAD3_YEAST RecName: Full=DNA repair helicase RAD3; AltName: Full=General
transcription and DNA repair factor IIH subunit RAD3;
Short=TFIIH subunit RAD3
gi|4269|emb|CAA26215.1| unnamed protein product [Saccharomyces cerevisiae]
gi|172331|gb|AAA34943.1| RAD3 protein [Saccharomyces cerevisiae]
gi|603412|gb|AAB64698.1| Rad3p: DNA repair helicase component of transcription factor b
[Saccharomyces cerevisiae]
gi|151944888|gb|EDN63147.1| transcription initiation factor TFIIH subunit [Saccharomyces
cerevisiae YJM789]
gi|256271309|gb|EEU06379.1| Rad3p [Saccharomyces cerevisiae JAY291]
gi|259146100|emb|CAY79360.1| Rad3p [Saccharomyces cerevisiae EC1118]
gi|285811805|tpg|DAA07833.1| TPA: Rad3p [Saccharomyces cerevisiae S288c]
gi|323305313|gb|EGA59060.1| Rad3p [Saccharomyces cerevisiae FostersB]
gi|323355348|gb|EGA87173.1| Rad3p [Saccharomyces cerevisiae VL3]
gi|349577832|dbj|GAA23000.1| K7_Rad3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299876|gb|EIW10968.1| Rad3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 778
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q N+M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|357631598|gb|EHJ79067.1| FancJ-like protein [Danaus plexippus]
Length = 830
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
E P + Y Q M + ++ + + ESPTGTGK+L+L+C L W
Sbjct: 18 EVVLPIEPYRCQMVVMSKVIKAINEGQNCLLESPTGTGKTLALLCSSLAW 67
>gi|452840050|gb|EME41988.1| hypothetical protein DOTSEDRAFT_72929 [Dothistroma septosporum
NZE10]
Length = 798
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---- 73
+ ++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 5 IEDLPVLFPYP-RIYPEQYAYMCDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQFY 63
Query: 74 -------YSDHKIAGLEKIEAEIKDLEISKNETVSE 102
Y ++ +EK AE+K L + + + E
Sbjct: 64 PEARKLIYCSRTMSEIEKALAELKALMKYRADQLGE 99
>gi|449018319|dbj|BAM81721.1| DNA excision repair protein ERCC2/XPD [Cyanidioschyzon merolae
strain 10D]
Length = 782
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 12/76 (15%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK------- 78
FP+D Y Q +M+ L LD++ I E PTGTGK+++L+ I + H+
Sbjct: 12 FPYDYVYPEQYAYMRELKRALDSNGHCILEMPTGTGKTVTLLSFITSYQLAHREVRKLIY 71
Query: 79 ----IAGLEKIEAEIK 90
+ LEK+ +E++
Sbjct: 72 CTRTVGELEKVLSELE 87
>gi|340506361|gb|EGR32513.1| tfiih basal transcription factor complex helicase subunit,
putative [Ichthyophthirius multifiliis]
Length = 809
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLS 65
+ ++P FP+ Y Q +MK+L LDN GI E PTGTGK++
Sbjct: 5 INDLPVYFPYQ-SLYKEQLEYMKDLKLILDNQGHGIIEMPTGTGKTVC 51
>gi|255941534|ref|XP_002561536.1| Pc16g12370 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586159|emb|CAP93907.1| Pc16g12370 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 795
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ + Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKKTLDVGGHCVLEMPSGTGKTVSLLSLIVAYQQHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ +EK AE+K L
Sbjct: 66 HRKLIYCSRTMSEIEKALAELKAL 89
>gi|407928326|gb|EKG21185.1| Xeroderma pigmentosum group D protein [Macrophomina phaseolina MS6]
Length = 788
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
E+P FP+P Y Q +M +L TLD I E P+GTGK++SL+ I+ +
Sbjct: 7 ELPVLFPYP-RIYPEQYKYMCDLKRTLDAGGNCILEMPSGTGKTVSLLSLIIAYQQHQPE 65
Query: 74 -----YSDHKIAGLEKIEAEIKDLEISKNETV 100
Y ++ +EK E+K L + E +
Sbjct: 66 KRKLIYCSRTMSEIEKALHELKALMKYRTEQL 97
>gi|402467806|gb|EJW03051.1| DNA repair helicase (rad3) [Edhazardia aedis USNM 41457]
Length = 704
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+ PF Y+ Q + ++ S + ESPTGTGK+ S++C +L + S+ K
Sbjct: 8 QLKMPFKPYEAQRITTSQILDSICTSTSSLIESPTGTGKTYSILCSVLSYLSNTK 62
>gi|239607217|gb|EEQ84204.1| DNA repair helicase RAD3 [Ajellomyces dermatitidis ER-3]
Length = 779
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHRPE 65
Query: 74 -----YSDHKIAGLEKIEAEIKDL 92
Y ++ +EK AE+K L
Sbjct: 66 QRKLIYCSRTMSEIEKALAELKAL 89
>gi|296423910|ref|XP_002841495.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637735|emb|CAZ85686.1| unnamed protein product [Tuber melanosporum]
Length = 748
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 12/79 (15%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW----------- 73
FP+P Y + +M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 54 FPYP-RIYPGEWRYMTDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQSFPEPRKLI 112
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y ++ +EK AE+K L
Sbjct: 113 YCSRTMSEIEKALAELKAL 131
>gi|255072415|ref|XP_002499882.1| predicted protein [Micromonas sp. RCC299]
gi|226515144|gb|ACO61140.1| predicted protein [Micromonas sp. RCC299]
Length = 797
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 14/90 (15%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS---LSLI---------CGILK 72
FP+ + Y Q +M L LD G E PTGTGK+ LSLI CG L
Sbjct: 12 FPYEY-LYPEQYRYMLELKRALDAKGHGCLEMPTGTGKTITCLSLITSYQLQNPECGKL- 69
Query: 73 WYSDHKIAGLEKIEAEIKDLEISKNETVSE 102
Y + +EK+ AE+++L+ + + V +
Sbjct: 70 IYCTRTVPEMEKVLAELRNLQAYREKHVGK 99
>gi|387595670|gb|EIJ93293.1| hypothetical protein NEPG_01635 [Nematocida parisii ERTm1]
Length = 672
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 2 ASKTPNEDKEFKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTG 61
+ K NE +EF ++ L P+ Y Q +F+ + + S GI ESPTGTG
Sbjct: 29 SEKLENECREFIKKCNL---------PYVLYKGQKDFITDATEIISKSALGILESPTGTG 79
Query: 62 KSLSLICGILKWYSDHKI--AGLEKIEAEI 89
K+LS + +K+ + AG+ K E+
Sbjct: 80 KTLSSLITAIKYVGNSVFDSAGISKDNMEL 109
>gi|167524360|ref|XP_001746516.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775278|gb|EDQ88903.1| predicted protein [Monosiga brevicollis MX1]
Length = 1041
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 46 LDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKDLE 93
L+ + ESPTGTGK+L+L+C +L W K+ +I A DLE
Sbjct: 73 LEQKDNALLESPTGTGKTLALLCSVLAWQKSEKM----RIAAMRADLE 116
>gi|365983344|ref|XP_003668505.1| hypothetical protein NDAI_0B02270 [Naumovozyma dairenensis CBS
421]
gi|343767272|emb|CCD23262.1| hypothetical protein NDAI_0B02270 [Naumovozyma dairenensis CBS
421]
Length = 771
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q ++M +L TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYHYMCDLKKTLDAGGNSILEMPSGTGKTVSLLSLTISYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|123493892|ref|XP_001326390.1| helicase [Trichomonas vaginalis G3]
gi|121909304|gb|EAY14167.1| helicase, putative [Trichomonas vaginalis G3]
Length = 717
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 32 YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
Y IQ+ F ++ +K G FESPTGTGKS+S++ L +
Sbjct: 20 YSIQTEFATDMIKAFQENKIGFFESPTGTGKSMSVLTSSLAF 61
>gi|390597969|gb|EIN07368.1| DNA repair helicase [Punctularia strigosozonata HHB-11173 SS5]
Length = 796
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q +M +L TLD + + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQFYPTKRKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDL 92
+ +EK +E+K L
Sbjct: 72 CSRTVPEIEKALSELKRL 89
>gi|393236508|gb|EJD44056.1| DNA repair helicase [Auricularia delicata TFB-10046 SS5]
Length = 810
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q ++M +L TLD + + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYSYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQFFPTKRKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDL 92
+ +EK AE+K L
Sbjct: 72 CSRTVPEIEKALAELKRL 89
>gi|366990349|ref|XP_003674942.1| hypothetical protein NCAS_0B04860 [Naumovozyma castellii CBS
4309]
gi|342300806|emb|CCC68570.1| hypothetical protein NCAS_0B04860 [Naumovozyma castellii CBS
4309]
Length = 774
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q ++M +L TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYHYMCDLKKTLDAGGNSILEMPSGTGKTVSLLSLTIAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|325191332|emb|CCA26115.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 957
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 8 EDKEFKEQRPLAEVPSEFPFPFDA--YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLS 65
+D++ K++R L + + F D + Q M + L ++ + ESPTG+GK+L+
Sbjct: 10 KDEDDKKERNLMIMGYKVAFATDKKPFPAQLAVMNRVLLALKTNQHALLESPTGSGKTLA 69
Query: 66 LICGILKWYSDHKIAGLEKIEAEIKDLEISKNETVSEDWIEQQSFEPT 113
++C L + + L + E + K+ ++ N +V + SF P+
Sbjct: 70 ILCSCLSFQKQYTEELLFQKEVQQKEEALNTNNSV-----QDASFSPS 112
>gi|303271817|ref|XP_003055270.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463244|gb|EEH60522.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 741
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI------------CGILK 72
FP+ + Y Q +M+ L LD G E PTGTGK+++ + CG L
Sbjct: 12 FPYEY-LYPEQYKYMQELKRGLDAKGHGCLEMPTGTGKTITCLALITSYQLAHPECGKL- 69
Query: 73 WYSDHKIAGLEKIEAEIKDLEISKNETVSE 102
Y + +EK+ AE++ L+ + + V E
Sbjct: 70 IYCTRTVPEMEKVLAELRVLQAYREKHVGE 99
>gi|71994594|ref|NP_001022900.1| Protein Y50D7A.11 [Caenorhabditis elegans]
gi|351059426|emb|CCD73798.1| Protein Y50D7A.11 [Caenorhabditis elegans]
Length = 197
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q +MK + LD G+ E P+GTGK++SL+ +L +
Sbjct: 12 FPYDYVYPEQVLYMKEVKKALDARGHGLLEMPSGTGKTVSLLSLVLAYMISYPDKLDKLV 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y I +EK E+K L
Sbjct: 72 YCSRTIPEIEKCVEEMKVL 90
>gi|448407039|ref|ZP_21573466.1| DEAD_2 domain protein, partial [Halosimplex carlsbadense 2-9-1]
gi|445676252|gb|ELZ28775.1| DEAD_2 domain protein, partial [Halosimplex carlsbadense 2-9-1]
Length = 225
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 27 FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP++ YD Q+ M +Y LD + +FE TGTGK+LS + L++
Sbjct: 13 FPYEEPYDHQTEAMGTIYDALDERRNVLFEGATGTGKTLSALAPALEY 60
>gi|56118508|ref|NP_001008131.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Xenopus (Silurana) tropicalis]
gi|51703768|gb|AAH81339.1| ercc2 protein [Xenopus (Silurana) tropicalis]
Length = 760
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 13/80 (16%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW----------- 73
FP+ + Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYEY-IYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVAYQRAYPLEVTKL 70
Query: 74 -YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 71 IYCSRTVPEIEKVVEELRKL 90
>gi|308477366|ref|XP_003100897.1| hypothetical protein CRE_16215 [Caenorhabditis remanei]
gi|308264471|gb|EFP08424.1| hypothetical protein CRE_16215 [Caenorhabditis remanei]
Length = 789
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 22/102 (21%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q +MK + LD + G+ E P+GTGK++SL+ +L +
Sbjct: 12 FPYDYVYPEQVLYMKEVKKALDANGHGLLEMPSGTGKTVSLLSLVLAYMISYPDRLDKLV 71
Query: 74 YSDHKIAGLEKIEAEIKDLEISKNETVSEDWIEQQSFEPTIR 115
Y I +EK E+K V D+ E+++ +P +
Sbjct: 72 YCSRTIPEIEKCVEEMK---------VLYDYWEKETGQPVAK 104
>gi|21961619|gb|AAH34517.1| Ercc2 protein [Mus musculus]
Length = 739
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAY 59
>gi|225560307|gb|EEH08589.1| DNA repair helicase RAD3 [Ajellomyces capsulatus G186AR]
Length = 797
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
++P FP+P Y Q +M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHQPE 65
Query: 74 -----YSDHKIAGLEKIEAEIKDL 92
Y ++ +EK AE+K L
Sbjct: 66 QRKLIYCSRTMSEIEKALAELKAL 89
>gi|380087536|emb|CCC05322.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 989
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 17/22 (77%)
Query: 57 PTGTGKSLSLICGILKWYSDHK 78
PTGTGKSLSLIC L W +HK
Sbjct: 134 PTGTGKSLSLICASLTWLRNHK 155
>gi|326932020|ref|XP_003212120.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Meleagris gallopavo]
Length = 1136
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/22 (68%), Positives = 17/22 (77%)
Query: 52 GIFESPTGTGKSLSLICGILKW 73
GI ESPTGTGK+L L+C L W
Sbjct: 19 GILESPTGTGKTLCLLCSTLAW 40
>gi|321249881|ref|XP_003191608.1| general RNA polymerase II transcription factor [Cryptococcus
gattii WM276]
gi|317458075|gb|ADV19821.1| general RNA polymerase II transcription factor, putative
[Cryptococcus gattii WM276]
Length = 799
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---- 73
L ++P FP+ Y Q ++M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 5 LGDLPVLFPYD-RLYPEQYSYMADLKTTLDAGGHCVLEMPSGTGKTVSLLSLIIAYMQFY 63
Query: 74 -------YSDHKIAGLEKIEAEIKDL 92
Y + +EK AE+K L
Sbjct: 64 PNKRKLIYCSRTVPEIEKALAELKRL 89
>gi|74219327|dbj|BAE26794.1| unnamed protein product [Mus musculus]
Length = 760
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+D Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAY 59
>gi|268569974|ref|XP_002640663.1| C. briggsae CBR-DOG-1 protein [Caenorhabditis briggsae]
Length = 869
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 14 EQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
EQ + VP FP Y Q + + L +S+ + ESPTG+GK+++L+ W
Sbjct: 64 EQLMMLSVPVRFPKGMSLYPTQKLMIVRILAALKSSQNVLGESPTGSGKTMALLSSTCAW 123
Query: 74 YSDH 77
+ +
Sbjct: 124 LNQY 127
>gi|336259278|ref|XP_003344441.1| hypothetical protein SMAC_08637 [Sordaria macrospora k-hell]
Length = 722
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 17/22 (77%)
Query: 57 PTGTGKSLSLICGILKWYSDHK 78
PTGTGKSLSLIC L W +HK
Sbjct: 134 PTGTGKSLSLICASLTWLRNHK 155
>gi|390367539|ref|XP_784080.2| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like, partial [Strongylocentrotus purpuratus]
Length = 272
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY--SDHKIAGLE 83
FP+D Y Q +M L LD G+ E P+GTGK++SL+ I+ + + H++ L
Sbjct: 12 FPYDYIYPEQFMYMMELKKLLDAKGHGVLEMPSGTGKTVSLLALIVAYIQANPHELTKLI 71
Query: 84 KIEAEIKDLEISKNETVS-EDWIEQQSFE 111
+ ++E + E D+IE+Q+ E
Sbjct: 72 YCSRTVPEIEKAVEELRRLLDYIEEQTGE 100
>gi|268570745|ref|XP_002640826.1| Hypothetical protein CBG15713 [Caenorhabditis briggsae]
Length = 755
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q +MK + LD + G+ E P+GTGK++SL+ +L +
Sbjct: 12 FPYDYVYPEQVLYMKEVKKALDANGHGLLEMPSGTGKTVSLLSLVLSYMISYPDRLDKLV 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y I +EK E+K L
Sbjct: 72 YCSRTIPEIEKCVEEMKVL 90
>gi|405958071|gb|EKC24234.1| TFIIH basal transcription factor complex helicase subunit
[Crassostrea gigas]
Length = 1184
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 22/95 (23%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q +M L +LD E P+GTGK++SL+ I+ +
Sbjct: 392 FPYDYIYPEQYMYMLELKKSLDAKGHCALEMPSGTGKTISLLSLIVAYMKANPLEVTKLI 451
Query: 74 YSDHKIAGLEKIEAEIKDLEISKNETVSEDWIEQQ 108
Y + LEK+ AE+K+L D+ EQQ
Sbjct: 452 YCSRTVPELEKVVAELKNL---------MDYYEQQ 477
>gi|390366295|ref|XP_780825.3| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Strongylocentrotus purpuratus]
Length = 734
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY--SDHKIAGLE 83
FP+D Y Q +M L LD G+ E P+GTGK++SL+ I+ + + H++ L
Sbjct: 12 FPYDYIYPEQFMYMMELKKLLDAKGHGVLEMPSGTGKTVSLLALIVAYIQANPHELTKLI 71
Query: 84 KIEAEIKDLEISKNETVS-EDWIEQQSFE 111
+ ++E + E D+IE+Q+ E
Sbjct: 72 YCSRTVPEIEKAVEELRRLLDYIEEQTGE 100
>gi|50556538|ref|XP_505677.1| YALI0F20746p [Yarrowia lipolytica]
gi|49651547|emb|CAG78486.1| YALI0F20746p [Yarrowia lipolytica CLIB122]
Length = 785
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P +P+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLWPYP-RIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQQHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDLEISKNETVS 101
H+ ++ +EK AE+K+L + ET+
Sbjct: 66 HRKIIYCSRTMSEIEKALAELKNLMKFRTETLG 98
>gi|401827400|ref|XP_003887792.1| Rad3-like DNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392998799|gb|AFM98811.1| Rad3-like DNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 618
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 30 DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+ Y+ Q F+++ +++ GIF SPTGTGK++SL+ ++ +
Sbjct: 4 ELYEGQKQFIRDARRVVEDGGVGIFSSPTGTGKTMSLLNAVMDY 47
>gi|380094849|emb|CCC07351.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 806
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS---LSLICGILKWYSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK+ LSLI ++Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMVDLKKTLDAGGNCVLEMPSGTGKTVTLLSLIVAYQQYYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|76156607|gb|AAX27782.2| SJCHGC01374 protein [Schistosoma japonicum]
Length = 226
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 13/81 (16%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW----------- 73
FP+ + Y Q ++M L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYEY-IYPEQYHYMIELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVAYMKARPGIVEKF 70
Query: 74 -YSDHKIAGLEKIEAEIKDLE 93
Y + LEK+ E+K L+
Sbjct: 71 VYCSRTVPELEKVIDELKVLD 91
>gi|303317606|ref|XP_003068805.1| DNA repair helicase rad15 , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108486|gb|EER26660.1| DNA repair helicase rad15 , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320038802|gb|EFW20737.1| DNA repair helicase RAD3 [Coccidioides posadasii str. Silveira]
Length = 795
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
++P FP+P Y Q ++ +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYICDLKKTLDVGGHCVLEMPSGTGKTVSLLSLIIAYQQHYPS 65
Query: 74 -----YSDHKIAGLEKIEAEIKDL 92
Y ++ +EK E+++L
Sbjct: 66 HRKLIYCSRTMSEIEKALTELREL 89
>gi|255718745|ref|XP_002555653.1| KLTH0G14300p [Lachancea thermotolerans]
gi|238937037|emb|CAR25216.1| KLTH0G14300p [Lachancea thermotolerans CBS 6340]
Length = 782
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y++
Sbjct: 7 DLPVIFPYP-KIYPEQYQYMCDIKKTLDAGGNSILEMPSGTGKTVSLLSLAVAYQTHYAE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|218188567|gb|EEC70994.1| hypothetical protein OsI_02661 [Oryza sativa Indica Group]
Length = 984
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
M + +L K + ESPTGTGK+L L+C L W
Sbjct: 1 MDRVLESLQQGKNALLESPTGTGKTLCLLCSALAW 35
>gi|392870657|gb|EAS32475.2| DNA repair helicase rad15 [Coccidioides immitis RS]
Length = 795
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
++P FP+P Y Q ++ +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYICDLKKTLDVGGHCVLEMPSGTGKTVSLLSLIIAYQQHYPS 65
Query: 74 -----YSDHKIAGLEKIEAEIKDL 92
Y ++ +EK E+++L
Sbjct: 66 HRKLIYCSRTMSEIEKALTELREL 89
>gi|119186659|ref|XP_001243936.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 757
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
++P FP+P Y Q ++ +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYICDLKKTLDVGGHCVLEMPSGTGKTVSLLSLIIAYQQHYPS 65
Query: 74 -----YSDHKIAGLEKIEAEIKDL 92
Y ++ +EK E+++L
Sbjct: 66 HRKLIYCSRTMSEIEKALTELREL 89
>gi|16416010|emb|CAB91361.2| probable excision repair protein rhp3 [Neurospora crassa]
Length = 806
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS---LSLICGILKWYSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK+ LSLI ++Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMVDLKKTLDAGGNCVLEMPSGTGKTVTLLSLIVAYQQYYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|367055120|ref|XP_003657938.1| hypothetical protein THITE_2124189 [Thielavia terrestris NRRL
8126]
gi|347005204|gb|AEO71602.1| hypothetical protein THITE_2124189 [Thielavia terrestris NRRL
8126]
Length = 800
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS---LSLICGILKWYSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK+ LSLI ++Y
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMVDLKKTLDAGGNCVLEMPSGTGKTVTLLSLIVAYQQYYPS 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ +EK E+K L
Sbjct: 66 HRKLIYCSRTMSEIEKALVELKAL 89
>gi|336468265|gb|EGO56428.1| hypothetical protein NEUTE1DRAFT_130389 [Neurospora tetrasperma
FGSC 2508]
gi|350289484|gb|EGZ70709.1| putative excision repair protein rhp3 [Neurospora tetrasperma
FGSC 2509]
Length = 806
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS---LSLICGILKWYSD 76
++P FP+P Y Q +M +L TLD + E P+GTGK+ LSLI ++Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMVDLKKTLDAGGNCVLEMPSGTGKTVTLLSLIVAYQQYYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|403216750|emb|CCK71246.1| hypothetical protein KNAG_0G01890 [Kazachstania naganishii CBS
8797]
Length = 773
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q ++M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYHYMCDIKRTLDAGGNSILEMPSGTGKTVSLLSLTVAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|321457810|gb|EFX68889.1| hypothetical protein DAPPUDRAFT_36892 [Daphnia pulex]
Length = 57
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+P AY Q + M + L + ESPTG+GK+L+L C + W
Sbjct: 1 YPAKAYPSQISMMDKVIRGLQRGHHYLPESPTGSGKTLALFCASIAW 47
>gi|325186971|emb|CCA21515.1| predicted protein putative [Albugo laibachii Nc14]
Length = 801
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
FP+D Y Q +M+ L LD + E PTGTGK++SL+ +L + H
Sbjct: 12 FPYDRMYAEQLQYMRELKRALDAHGHCMLEMPTGTGKTISLLALVLAYRHAH 63
>gi|443695361|gb|ELT96293.1| hypothetical protein CAPTEDRAFT_129050, partial [Capitella teleta]
Length = 169
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q +M+ L LD E P+GTGK++SL+ I+ +
Sbjct: 38 FPYDYIYPEQYAYMQELKRALDAQGHCALEMPSGTGKTVSLLSLIVAYMKQRPLDVTKLI 97
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + LEK+ E+K+L
Sbjct: 98 YCSRTVPELEKVVEELKNL 116
>gi|403338080|gb|EJY68268.1| hypothetical protein OXYTRI_11217 [Oxytricha trifallax]
Length = 779
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------YSDHKIAGLEKIEA 87
MK L TLD+ I E PTGTGK++ L+ IL + Y I +EK
Sbjct: 1 MKELKKTLDSEGHAILEMPTGTGKTVCLLSLILSYIKAKKPNFKLIYCTRTIVEMEKTLE 60
Query: 88 EIKDLEISKNETVSEDWIEQQSFE 111
E+K + + + D QQ F+
Sbjct: 61 ELKFVLEQREKDFPSDQSHQQQFQ 84
>gi|390366297|ref|XP_003731011.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Strongylocentrotus purpuratus]
Length = 672
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY--SDHKIAGLE 83
FP+D Y Q +M L LD G+ E P+GTGK++SL+ I+ + + H++ L
Sbjct: 12 FPYDYIYPEQFMYMMELKKLLDAKGHGVLEMPSGTGKTVSLLALIVAYIQANPHELTKLI 71
Query: 84 KIEAEIKDLEISKNETVS-EDWIEQQSFE 111
+ ++E + E D+IE+Q+ E
Sbjct: 72 YCSRTVPEIEKAVEELRRLLDYIEEQTGE 100
>gi|392567211|gb|EIW60386.1| DNA repair helicase [Trametes versicolor FP-101664 SS1]
Length = 804
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q +M +L TLD + + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYAYMCDLKRTLDATGHCLLEMPSGTGKTVSLLSLIVSYQQFYPTKRKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDL-EISKNETVSEDWIEQQS 109
+ +EK AE+K L + K +E+ E+++
Sbjct: 72 CSRTVPEIEKALAELKRLMDYRKEHAETEEQREKEA 107
>gi|45201210|ref|NP_986780.1| AGR114Cp [Ashbya gossypii ATCC 10895]
gi|44986064|gb|AAS54604.1| AGR114Cp [Ashbya gossypii ATCC 10895]
gi|374110029|gb|AEY98934.1| FAGR114Cp [Ashbya gossypii FDAG1]
Length = 774
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVIFPYP-KIYPEQYQYMCDIKKTLDAGGNSILEMPSGTGKTVSLLALTVAYQMHYKE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|168039045|ref|XP_001772009.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676610|gb|EDQ63090.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 750
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 12/80 (15%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW----------- 73
FP+ F Y Q ++M +L TLD + E PTGTGK+++L+ I +
Sbjct: 12 FPYEF-IYPEQYDYMVDLKRTLDARGHCLLEMPTGTGKTITLLSLITSYMLANPSVGKLI 70
Query: 74 YSDHKIAGLEKIEAEIKDLE 93
Y + +EK+ E++ L+
Sbjct: 71 YCTRTVHEMEKVLEELRKLQ 90
>gi|156846864|ref|XP_001646318.1| hypothetical protein Kpol_1032p54 [Vanderwaltozyma polyspora DSM
70294]
gi|156116993|gb|EDO18460.1| hypothetical protein Kpol_1032p54 [Vanderwaltozyma polyspora DSM
70294]
Length = 776
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q ++M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYHYMCDMKKTLDAGGNSILEMPSGTGKTVSLLSLTVAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|366997945|ref|XP_003683709.1| hypothetical protein TPHA_0A01920 [Tetrapisispora phaffii CBS
4417]
gi|357522004|emb|CCE61275.1| hypothetical protein TPHA_0A01920 [Tetrapisispora phaffii CBS
4417]
Length = 773
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q ++M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYHYMCDIKRTLDAGGNSILEMPSGTGKTVSLLSLTVAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|449547579|gb|EMD38547.1| hypothetical protein CERSUDRAFT_113726 [Ceriporiopsis
subvermispora B]
Length = 794
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q +M +L TLD + + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQFYPNKRKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDL 92
+ +EK AE+K L
Sbjct: 72 CSRTVPEIEKALAELKRL 89
>gi|409045964|gb|EKM55444.1| hypothetical protein PHACADRAFT_256068 [Phanerochaete carnosa
HHB-10118-sp]
Length = 792
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q ++M +L TLD + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYSYMCDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVSYQQFYPARRKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDL 92
+ +EK AE+K L
Sbjct: 72 CSRTVPEIEKALAELKRL 89
>gi|363751190|ref|XP_003645812.1| hypothetical protein Ecym_3517 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889446|gb|AET38995.1| Hypothetical protein Ecym_3517 [Eremothecium cymbalariae
DBVPG#7215]
Length = 756
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVIFPYP-KIYPEQYQYMCDLKKTLDIGGNSILEMPSGTGKTVSLLSLTVAYQMHYPE 65
Query: 77 H-KIAGLEKIEAEI 89
H KI + +EI
Sbjct: 66 HRKIVYCSRTMSEI 79
>gi|392595870|gb|EIW85193.1| DNA repair helicase [Coniophora puteana RWD-64-598 SS2]
Length = 787
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q +M +L TLD + + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQFYPNKRKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDL 92
+ +EK AE+K L
Sbjct: 72 CSRTVPEIEKALAELKRL 89
>gi|342186023|emb|CCC95508.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 973
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSK----FGIFESPTGTGKSLSLICGILKW 73
+ E S + PF+ Y +Q + M+ + +L +S E PTG GK+L+L+ +L++
Sbjct: 1 MVESSSPYVMPFEPYAVQKDMMQTITTSLLSSSPHLPIAAVEIPTGCGKTLALLSSVLRY 60
Query: 74 YSDHKIAGLEKI 85
++ LEK+
Sbjct: 61 QAE-----LEKL 67
>gi|296822250|ref|XP_002850254.1| DNA repair helicase RAD3 [Arthroderma otae CBS 113480]
gi|238837808|gb|EEQ27470.1| DNA repair helicase RAD3 [Arthroderma otae CBS 113480]
Length = 792
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L LD + E P+GTGK+++L+ I+ + Y +
Sbjct: 7 DLPILFPYP-RIYPEQYAYMCDLKKVLDAGGHCVLEMPSGTGKTITLLALIVAYQQHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|302681585|ref|XP_003030474.1| hypothetical protein SCHCODRAFT_77555 [Schizophyllum commune
H4-8]
gi|300104165|gb|EFI95571.1| hypothetical protein SCHCODRAFT_77555 [Schizophyllum commune
H4-8]
Length = 792
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q +M +L TLD + + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQFYPTKRKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDL 92
+ +EK AE+K L
Sbjct: 72 CSRTVPEIEKALAELKRL 89
>gi|315056317|ref|XP_003177533.1| DNA repair helicase RAD3 [Arthroderma gypseum CBS 118893]
gi|311339379|gb|EFQ98581.1| DNA repair helicase RAD3 [Arthroderma gypseum CBS 118893]
Length = 790
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L LD + E P+GTGK+++L+ I+ + Y +
Sbjct: 7 DLPILFPYP-RIYPEQYAYMCDLKKVLDAGGHCVLEMPSGTGKTITLLALIVAYQQHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|297845000|ref|XP_002890381.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336223|gb|EFH66640.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 515
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 29 FDAYDIQSNFMKNLYYTLDNS-KFG----IFESPTGTGKSLSLICGILKWYSDHK 78
+ Y FM + TL + ++G + ESPT TGKSLSL+C +L W +K
Sbjct: 6 YQPYGTHLAFMSRVISTLYRAQRYGHSHTLLESPTNTGKSLSLLCSVLPWQKSYK 60
>gi|118373403|ref|XP_001019895.1| hypothetical protein TTHERM_00588880 [Tetrahymena thermophila]
gi|89301662|gb|EAR99650.1| hypothetical protein TTHERM_00588880 [Tetrahymena thermophila
SB210]
Length = 1492
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
P E P+P Q + M+ + TL N K +F+SPTGTGK+L I L +
Sbjct: 529 PHENPYPN-----QLDSMQEIIKTLKNKKNLLFQSPTGTGKTLMTISSALAY 575
>gi|326475278|gb|EGD99287.1| DNA repair helicase RAD3 [Trichophyton tonsurans CBS 112818]
Length = 789
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L LD + E P+GTGK+++L+ I+ + Y +
Sbjct: 7 DLPILFPYP-RIYPEQYAYMCDLKKVLDAGGHCVLEMPSGTGKTITLLALIVAYQQHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|326480373|gb|EGE04383.1| DNA repair helicase RAD3 [Trichophyton equinum CBS 127.97]
Length = 770
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L LD + E P+GTGK+++L+ I+ + Y +
Sbjct: 7 DLPILFPYP-RIYPEQYAYMCDLKKVLDAGGHCVLEMPSGTGKTITLLALIVAYQQHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|303390346|ref|XP_003073404.1| Rad3-like ATP dependent DNA binding helicase [Encephalitozoon
intestinalis ATCC 50506]
gi|303302550|gb|ADM12044.1| Rad3-like ATP dependent DNA binding helicase [Encephalitozoon
intestinalis ATCC 50506]
Length = 619
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 30 DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGI 70
+ Y+ Q F+++ +D GIF SPTGTGK++SL+ +
Sbjct: 5 ELYESQKLFIEDARRVIDGGSVGIFSSPTGTGKTISLLSAV 45
>gi|198412602|ref|XP_002126055.1| PREDICTED: similar to ERCC2/XPD gene product [Ciona intestinalis]
Length = 760
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 13/80 (16%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW----------- 73
FP+ F Y Q ++M L TLD G+ E P+GTGK+ +L+ I+ +
Sbjct: 12 FPYEF-IYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTATLLSLIVAYQYEYPEIISKL 70
Query: 74 -YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 71 IYCSRTVPEIEKVLEELRRL 90
>gi|327294313|ref|XP_003231852.1| DNA repair helicase RAD3 [Trichophyton rubrum CBS 118892]
gi|326465797|gb|EGD91250.1| DNA repair helicase RAD3 [Trichophyton rubrum CBS 118892]
Length = 790
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M +L LD + E P+GTGK+++L+ I+ + Y +
Sbjct: 7 DLPILFPYP-RIYPEQYAYMCDLKKVLDAGGHCVLEMPSGTGKTITLLALIVAYQQHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|170591680|ref|XP_001900598.1| probable DNA helicase ERCC2/XPD - southern platyfish [Brugia
malayi]
gi|158592210|gb|EDP30812.1| probable DNA helicase ERCC2/XPD - southern platyfish, putative
[Brugia malayi]
Length = 763
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 13/82 (15%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW--------- 73
+F FP+D Y Q +M L TLD + E P+GTGK++SL+ ++ +
Sbjct: 4 KFTFPYDYIYPEQILYMSELKKTLDAKGHCLLEMPSGTGKTVSLLSLVIAYMLRFPDHLD 63
Query: 74 ---YSDHKIAGLEKIEAEIKDL 92
Y I +EK E+++L
Sbjct: 64 KLVYCSRTIPEIEKCVEELRNL 85
>gi|365760988|gb|EHN02666.1| Rad3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 775
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYKYMCDIKRTLDVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|432328752|ref|YP_007246896.1| DNA helicase, Rad3 [Aciduliprofundum sp. MAR08-339]
gi|432135461|gb|AGB04730.1| DNA helicase, Rad3 [Aciduliprofundum sp. MAR08-339]
Length = 607
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 40/70 (57%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FP++ +Q ++++ L+NS +FE+PTG+GK+++ + +K+ H + L +
Sbjct: 3 FPYEFRKVQRTIVRDIENALENSFHMVFEAPTGSGKTIATLYPSVKYALKHGMKILYLVH 62
Query: 87 AEIKDLEISK 96
++ ++ K
Sbjct: 63 TNSQEQQVIK 72
>gi|367008340|ref|XP_003678670.1| hypothetical protein TDEL_0A01270 [Torulaspora delbrueckii]
gi|359746327|emb|CCE89459.1| hypothetical protein TDEL_0A01270 [Torulaspora delbrueckii]
Length = 775
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYKYMCDIKKTLDAGGNSILEMPSGTGKTVSLLSLTIAYQLHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|324507092|gb|ADY43014.1| TFIIH basal transcription factor complex helicase XPD subunit,
partial [Ascaris suum]
Length = 761
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 13/82 (15%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW--------- 73
E FP+D Y Q +M+ + TLD + E P+GTGK++SL+ +L +
Sbjct: 9 EVYFPYDYIYPEQVLYMEEVKKTLDAQGHALLEMPSGTGKTISLLSLVLAYMLKFPDKLD 68
Query: 74 ---YSDHKIAGLEKIEAEIKDL 92
Y I +EK E+++L
Sbjct: 69 KLIYCSRTIPEIEKCVEELRNL 90
>gi|391325164|ref|XP_003737109.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Metaseiulus
occidentalis]
Length = 762
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW--------- 73
E FP+D Y Q ++M L LD G+ E P+GTGK+ +L+ IL +
Sbjct: 9 EVLFPYDFIYPEQYSYMLELKQCLDAKGHGVLEMPSGTGKTATLLSLILAYQKAYPSVIS 68
Query: 74 ---YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 69 KLVYCSRTMPEIEKVVEEVRRL 90
>gi|406605469|emb|CCH43113.1| DNA excision repair protein [Wickerhamomyces ciferrii]
Length = 781
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMSDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPE 65
Query: 77 H-KIAGLEKIEAEI 89
H KI + +EI
Sbjct: 66 HRKIVYCSRTMSEI 79
>gi|357114542|ref|XP_003559059.1| PREDICTED: DNA repair helicase UVH6-like [Brachypodium
distachyon]
Length = 752
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 13/79 (16%)
Query: 27 FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+DA Y Q +M L LD + E PTGTGK+ +LI I +
Sbjct: 12 FPYDAIYPEQHEYMGELKRALDARGHALLEMPTGTGKTAALISLITSYALANPSRPLRLF 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK AE++ L
Sbjct: 72 YCTRTVHEMEKTLAELRLL 90
>gi|395333451|gb|EJF65828.1| DNA repair helicase [Dichomitus squalens LYAD-421 SS1]
Length = 796
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q +M +L TLD + + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYAYMCDLKRTLDATGHCLLEMPSGTGKTVSLLSLIVSYQQFYPTKRKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDLEISKNETVSED 103
+ +EK +E++ L + + D
Sbjct: 72 CSRTVPEIEKALSELQRLMDYRRDCAETD 100
>gi|240976653|ref|XP_002402458.1| DNA repair helicase rad3/xp-D, putative [Ixodes scapularis]
gi|215491179|gb|EEC00820.1| DNA repair helicase rad3/xp-D, putative [Ixodes scapularis]
Length = 758
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW----------- 73
FP+ + Y Q ++M L LD G+ E P+GTGK+++L+ IL +
Sbjct: 13 FPYEY-IYPEQYSYMLELKQCLDAKGHGVLEMPSGTGKTVTLLSLILSYIKANPAMVSKL 71
Query: 74 -YSDHKIAGLEKIEAEIKDLEISKNETVSED 103
Y + +EK+ E++ L ++ ED
Sbjct: 72 IYCSRTLPEIEKVVEELRRLLKHYHKETGED 102
>gi|89887301|gb|ABD78310.1| regulator of telomere length [Bos taurus]
Length = 49
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y Q +M + L GI ESPTGTGK+
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKT 49
>gi|422296028|gb|EKU23327.1| DNA excision repair protein ERCC-2, partial [Nannochloropsis
gaditana CCMP526]
Length = 937
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 27 FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAG 81
FP+D Y+ Q N+M L LD + E PTGTGK++ LI I + H G
Sbjct: 13 FPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVG 68
>gi|444320679|ref|XP_004180996.1| hypothetical protein TBLA_0E04230 [Tetrapisispora blattae CBS
6284]
gi|387514039|emb|CCH61477.1| hypothetical protein TBLA_0E04230 [Tetrapisispora blattae CBS
6284]
Length = 779
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYQYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|443703659|gb|ELU01094.1| hypothetical protein CAPTEDRAFT_167887 [Capitella teleta]
Length = 786
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q +M+ L LD E P+GTGK++SL+ I+ +
Sbjct: 38 FPYDYIYPEQYAYMQELKRALDAQGHCALEMPSGTGKTVSLLSLIVAYMKQRPLDVTKLI 97
Query: 74 YSDHKIAGLEKIEAEIKDL-EISKNET 99
Y + LEK+ E+K+L E + ET
Sbjct: 98 YCSRTVPELEKVVEELKNLIEYYERET 124
>gi|302836153|ref|XP_002949637.1| hypothetical protein VOLCADRAFT_59582 [Volvox carteri f.
nagariensis]
gi|300264996|gb|EFJ49189.1| hypothetical protein VOLCADRAFT_59582 [Volvox carteri f.
nagariensis]
Length = 780
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAG--- 81
FP+ + Y Q +M L LD + E PTGTGK+++L+ I + HK G
Sbjct: 12 FPYEY-IYPEQYRYMLELKRALDARGHCLLEMPTGTGKTITLLSLITSYQLAHKEVGKLI 70
Query: 82 --------LEKIEAEIKDL 92
+EK+ AE+ +L
Sbjct: 71 YCTRTVPEMEKVLAELAEL 89
>gi|50306065|ref|XP_452994.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642127|emb|CAH01845.1| KLLA0C17776p [Kluyveromyces lactis]
Length = 778
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYQYMCDIKKTLDAGGNSILEMPSGTGKTVSLLSLTVAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|449455724|ref|XP_004145601.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Cucumis sativus]
Length = 1027
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYSDHKI 79
FPF Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W ++KI
Sbjct: 34 FPFRPYGSQLEFMDRVISTLDRAQREGHCHALLESPTGTGKSLSLLCSSLAWQKNYKI 91
>gi|351700944|gb|EHB03863.1| Putative ATP-dependent RNA helicase DDX12 [Heterocephalus glaber]
Length = 155
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 35 QSNFMKNLYYTLDNSKFGIFESPTGT------GKSLSLICGILKWYSD 76
++ FM LY L+ K IF+S G GKSLS IC L W D
Sbjct: 67 RTKFMAQLYQVLEAGKIRIFKSSIGMVNLVDMGKSLSHICRALSWLHD 114
>gi|222642047|gb|EEE70179.1| hypothetical protein OsJ_30256 [Oryza sativa Japonica Group]
Length = 1456
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 39 MKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKW 73
M + TLD ++ + ESPTGTGKSLSL+C L W
Sbjct: 1 MGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAW 40
>gi|123399989|ref|XP_001301578.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121882776|gb|EAX88648.1| hypothetical protein TVAG_023310 [Trichomonas vaginalis G3]
Length = 84
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
FPFP AY Q +M L +LD + E P+GTGK++ + IL + S K A
Sbjct: 13 FPFP-QAYPEQIEYMTQLKLSLDAGGPCVLEMPSGTGKTVLFVSLILAYMSQRKNA 67
>gi|401407959|ref|XP_003883428.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325117845|emb|CBZ53396.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 2564
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 35 QSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSD 76
Q M + + K I ESPTGTGK+ +L+C L W D
Sbjct: 284 QREVMAAVIQACQSEKHAIIESPTGTGKTAALLCATLAWQRD 325
>gi|448537080|ref|XP_003871257.1| Rad3 protein [Candida orthopsilosis Co 90-125]
gi|380355614|emb|CCG25132.1| Rad3 protein [Candida orthopsilosis]
Length = 792
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTISLLSLTVAYQMHYPE 65
Query: 77 H-KIAGLEKIEAEI 89
H KI + +EI
Sbjct: 66 HRKIVYCSRTMSEI 79
>gi|354544295|emb|CCE41018.1| hypothetical protein CPAR2_300070 [Candida parapsilosis]
Length = 794
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTISLLSLTVAYQMHYPE 65
Query: 77 H-KIAGLEKIEAEI 89
H KI + +EI
Sbjct: 66 HRKIVYCSRTMSEI 79
>gi|343472331|emb|CCD15481.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 407
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSK----FGIFESPTGTGKSLSLICGILKW 73
+ E S + PF+ Y +Q + M+ + +L +S E PTG GK+L+L+ +L++
Sbjct: 1 MVESSSPYVMPFEPYAVQKDMMQTITTSLLSSSPHLPIAAVEIPTGCGKTLALLSSVLRY 60
Query: 74 YSD 76
++
Sbjct: 61 QAE 63
>gi|123505191|ref|XP_001328927.1| helicase [Trichomonas vaginalis G3]
gi|121911876|gb|EAY16704.1| helicase, putative [Trichomonas vaginalis G3]
Length = 884
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 24 EFPFPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
E PFP + Y Q M + ++ + I ESPTGTGKS++L+ L + K
Sbjct: 16 EVPFPHEKPYAAQMALMAGVIKSMRTGQNAILESPTGTGKSIALLSAALAFQKSQK 71
>gi|387594391|gb|EIJ89415.1| hypothetical protein NEQG_00185 [Nematocida parisii ERTm3]
gi|387596770|gb|EIJ94391.1| hypothetical protein NEPG_01059 [Nematocida parisii ERTm1]
Length = 689
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
++ Y+ Q ++ + L+ G+ ESPTGTGK+LS++ ++ W + +K
Sbjct: 15 YELYEPQRQSIRTILNCLEEGVSGMIESPTGTGKTLSILESVVAWINKNK 64
>gi|328871712|gb|EGG20082.1| transcription factor IIH component [Dictyostelium fasciculatum]
Length = 791
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGI 70
FP+ F Y Q N+M +L +LDN + E P+GTGK++SL+ I
Sbjct: 12 FPYAF-IYPEQYNYMLHLKRSLDNGGPCMLEMPSGTGKTVSLLALI 56
>gi|146415208|ref|XP_001483574.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 843
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 60 DLPVLFPYP-RIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTISLLSLTVAYQMHYPE 118
Query: 77 H-KIAGLEKIEAEIK 90
H KI + +EI+
Sbjct: 119 HRKIVYCSRTMSEIE 133
>gi|145353086|ref|XP_001420860.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581095|gb|ABO99153.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 788
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI------------CGILK 72
FP+P Y Q M +LD G E PTGTGK+++++ CG L
Sbjct: 12 FPYP-QIYPEQLAMMTEFKRSLDARGHGAIEMPTGTGKTITVLSLCVSYQIAHPECGKL- 69
Query: 73 WYSDHKIAGLEKIEAEIKDLE 93
Y + +EK+ AE + LE
Sbjct: 70 IYCTRTVPEMEKVLAECRTLE 90
>gi|348687642|gb|EGZ27456.1| hypothetical protein PHYSODRAFT_554000 [Phytophthora sojae]
Length = 1025
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL---KWYSDHKIA 80
EFP + Q M + L + + ESPTG+GK+L+L+C L K + K+A
Sbjct: 30 EFPRGKRPFPAQFAVMNKVLTALKTEQHALLESPTGSGKTLALLCSSLTFQKQFVRDKVA 89
Query: 81 GLEKIEAEIK 90
L+K + + K
Sbjct: 90 ALKKEQEDPK 99
>gi|320583366|gb|EFW97581.1| DNA repair helicase RAD3 [Ogataea parapolymorpha DL-1]
Length = 1061
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 303 DLPVLFPYP-KIYPEQYAYMCDIKRTLDVGGNCILEMPSGTGKTISLLSLTVAYQMHYPE 361
Query: 77 H-KIAGLEKIEAEI 89
H KI + +EI
Sbjct: 362 HRKIVYCSRTMSEI 375
>gi|190347854|gb|EDK40205.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 843
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 60 DLPVLFPYP-RIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTISLLSLTVAYQMHYPE 118
Query: 77 H-KIAGLEKIEAEIK 90
H KI + +EI+
Sbjct: 119 HRKIVYCSRTMSEIE 133
>gi|156083623|ref|XP_001609295.1| DNA excision repair helicase [Babesia bovis T2Bo]
gi|154796546|gb|EDO05727.1| DNA excision repair helicase [Babesia bovis]
Length = 822
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW----------- 73
FP+P Y Q ++++L TLD + E PTGTGK+++L I +
Sbjct: 13 FPYP-QIYPEQLAYLRSLKSTLDAQGHAVLEMPTGTGKTVALFSLITSYQLARPEMGRLI 71
Query: 74 YSDHKIAGLEKIEAEIKDLEISKNETVSEDWIEQQS 109
Y I +EK E+K++ ++ + +D + ++
Sbjct: 72 YCTRTIPEMEKSLLELKEVIKYRDAELEKDRVAMEA 107
>gi|149239755|ref|XP_001525753.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449876|gb|EDK44132.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 325
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQMHYPE 65
Query: 77 H-KIAGLEKIEAEIK 90
H KI + +EI+
Sbjct: 66 HRKIVYCSRTMSEIE 80
>gi|221481803|gb|EEE20173.1| excision repair protein Rad15, putative [Toxoplasma gondii GT1]
Length = 1065
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
EV FP+ F Y Q +++ L +TLD + E PTGTGK+++L+
Sbjct: 8 EVTVYFPYDF-IYPEQYAYIRALKHTLDAKGHAVLEMPTGTGKTVALL 54
>gi|68471265|ref|XP_720409.1| hypothetical protein CaO19.7119 [Candida albicans SC5314]
gi|77022390|ref|XP_888639.1| hypothetical protein CaO19_7119 [Candida albicans SC5314]
gi|46442275|gb|EAL01566.1| hypothetical protein CaO19.7119 [Candida albicans SC5314]
gi|76573452|dbj|BAE44536.1| hypothetical protein [Candida albicans]
Length = 765
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q ++M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-RIYPEQYSYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQMHYPE 65
Query: 77 H-KIAGLEKIEAEI 89
H KI + +EI
Sbjct: 66 HRKIVYCSRTMSEI 79
>gi|449519583|ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein homolog [Cucumis
sativus]
Length = 1239
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYSDHKI 79
FPF Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W ++KI
Sbjct: 34 FPFRPYGSQLAFMGRVISTLDRAQREGHCHALLESPTGTGKSLSLLCSSLAWQKNYKI 91
>gi|321468232|gb|EFX79218.1| hypothetical protein DAPPUDRAFT_245256 [Daphnia pulex]
Length = 70
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 22 PSEFPFP-FDAYDIQSNFMKNLYYT----LDNSKFGIFESPTGTGKSLSLICGILKW 73
P E P P F+++ ++ M +L L + ESPTG+GK+L+L+C L W
Sbjct: 7 PEEDPTPEFESHPPENRQMDSLLVQVIEGLQRHHNCLLESPTGSGKTLALLCASLAW 63
>gi|237843395|ref|XP_002370995.1| excision repair protein rad15, putative [Toxoplasma gondii ME49]
gi|211968659|gb|EEB03855.1| excision repair protein rad15, putative [Toxoplasma gondii ME49]
gi|221502303|gb|EEE28036.1| excision repair protein Rad15, putative [Toxoplasma gondii VEG]
Length = 1065
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
EV FP+ F Y Q +++ L +TLD + E PTGTGK+++L+
Sbjct: 8 EVTVYFPYDF-IYPEQYAYIRALKHTLDAKGHAVLEMPTGTGKTVALL 54
>gi|218202591|gb|EEC85018.1| hypothetical protein OsI_32311 [Oryza sativa Indica Group]
Length = 1265
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 39 MKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKW 73
M + TLD ++ + ESPTGTGKSLSL+C L W
Sbjct: 1 MGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAW 40
>gi|448112560|ref|XP_004202128.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
gi|359465117|emb|CCE88822.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
Length = 795
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q ++M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPILFPYP-KIYPEQYSYMCDIKRTLDVGGNCILEMPSGTGKTISLLSITVAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|448115115|ref|XP_004202752.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
gi|359383620|emb|CCE79536.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
Length = 795
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q ++M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPILFPYP-KIYPEQYSYMCDIKRTLDVGGNCILEMPSGTGKTISLLSITVAYQMHYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|339246019|ref|XP_003374643.1| DNA repair helicase family protein [Trichinella spiralis]
gi|316972128|gb|EFV55819.1| DNA repair helicase family protein [Trichinella spiralis]
Length = 987
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 18/65 (27%)
Query: 27 FPFDAYDIQSNFMKNLYYTLD-----NSKFG-------------IFESPTGTGKSLSLIC 68
FP++ Y Q ++M+ + L+ N F ESPTGTGK+L L+C
Sbjct: 12 FPYEPYPCQLDYMEKVITCLNQLTEENFCFAYCLLHLNIQRSNAALESPTGTGKTLCLLC 71
Query: 69 GILKW 73
L W
Sbjct: 72 ACLGW 76
>gi|328770825|gb|EGF80866.1| hypothetical protein BATDEDRAFT_29908 [Batrachochytrium
dendrobatidis JAM81]
Length = 758
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---- 73
L ++P FP+ + Y Q +MK++ LD + E P+GTGK++SL+ I+ +
Sbjct: 5 LDDLPIIFPYEY-IYPEQYAYMKDMKRALDAQGHCLLEMPSGTGKTISLLSLIVAYQQFY 63
Query: 74 -------YSDHKIAGLEKIEAEIKDLEISKNE 98
Y + +EK AE+ L + E
Sbjct: 64 PEKRKLIYCSRTVPEIEKALAELSRLMKYREE 95
>gi|423397644|ref|ZP_17374845.1| exonuclease, DNA polymerase III, epsilon subunit [Bacillus cereus
BAG2X1-1]
gi|401649690|gb|EJS67268.1| exonuclease, DNA polymerase III, epsilon subunit [Bacillus cereus
BAG2X1-1]
Length = 934
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLIC 68
F+ D Q MK +Y L +S+F + E+ TGTGK+L+ +
Sbjct: 257 FERRDSQQMMMKEIYTALRDSRFSLIEAGTGTGKTLAYLL 296
>gi|302671513|ref|YP_003831473.1| Rad3-related DNA helicase [Butyrivibrio proteoclasticus B316]
gi|302395986|gb|ADL34891.1| Rad3-related DNA helicase [Butyrivibrio proteoclasticus B316]
Length = 821
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
+FPFP+ D Q + +Y T+ + K E+PTGTGK+++ + +K + KI+ L
Sbjct: 203 QFPFPYR--DGQKDLAAAVYRTIVHGKKLFLEAPTGTGKTITTVFPTVKAVGEGKISKLF 260
Query: 84 KIEAE 88
+ A+
Sbjct: 261 YLTAK 265
>gi|423408502|ref|ZP_17385651.1| exonuclease, DNA polymerase III, epsilon subunit [Bacillus cereus
BAG2X1-3]
gi|401657592|gb|EJS75100.1| exonuclease, DNA polymerase III, epsilon subunit [Bacillus cereus
BAG2X1-3]
Length = 934
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLIC 68
F+ D Q MK +Y L +S+F + E+ TGTGK+L+ +
Sbjct: 257 FERRDSQQMMMKEIYTALRDSRFSLIEAGTGTGKTLAYLL 296
>gi|410076214|ref|XP_003955689.1| hypothetical protein KAFR_0B02570 [Kazachstania africana CBS
2517]
gi|372462272|emb|CCF56554.1| hypothetical protein KAFR_0B02570 [Kazachstania africana CBS
2517]
Length = 779
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVLFPYP-KIYPEQYQYMCDIKKTLDAGGNSILEMPSGTGKTVSLLSLSVAYQMHYPE 65
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ +EK E+++L
Sbjct: 66 HRKIIYCSRTMSEIEKTLVELENL 89
>gi|255550000|ref|XP_002516051.1| conserved hypothetical protein [Ricinus communis]
gi|223544956|gb|EEF46471.1| conserved hypothetical protein [Ricinus communis]
Length = 270
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTG 59
FP+ Y I+ FMK LY +LD + ESPTG
Sbjct: 19 FPYKPYSIEVEFMKALYGSLDKGGISMLESPTG 51
>gi|449016631|dbj|BAM80033.1| nucleotide excision repair protein XP-D [Cyanidioschyzon merolae
strain 10D]
Length = 746
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 27 FPF-DAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI----CGILKW-------- 73
FP+ + Y Q +M++L LD + E P+GTGK++S++ I +W
Sbjct: 12 FPYREPYPEQLQYMRSLKRALDAGGHAVIEMPSGTGKTVSILSLASSYISRWPLVYRKLV 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ AE K L
Sbjct: 72 YCTRTVEEMEKVLAEAKRL 90
>gi|169853182|ref|XP_001833272.1| transcription factor TFIIH complex subunit Rad15 [Coprinopsis
cinerea okayama7#130]
gi|116505650|gb|EAU88545.1| transcription factor TFIIH complex subunit Rad15 [Coprinopsis
cinerea okayama7#130]
Length = 789
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q +M +L TLD + + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQFFPTRRKLVY 71
Query: 75 SDHKIAGLEKIEAEIKDL 92
+ +EK E+K L
Sbjct: 72 CSRTVPEIEKALTELKRL 89
>gi|340376021|ref|XP_003386532.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Amphimedon queenslandica]
Length = 754
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
FP+ + Y Q +M +L TLD + E P GTGK++SL+ I+ ++ H
Sbjct: 12 FPYEY-VYPEQYTYMLDLKRTLDAKGHCVLEMPCGTGKTVSLLALIIAYHMAH 63
>gi|403168572|ref|XP_003889745.1| DNA excision repair protein ERCC-2 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375167558|gb|EHS63460.1| DNA excision repair protein ERCC-2 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 784
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 12/81 (14%)
Query: 24 EFPFPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW--------- 73
E FP+D Y Q +M +L TLD + E P+GTGK++SL+ I+ +
Sbjct: 71 EILFPYDKIYPEQYAYMCDLKRTLDLGGHCVLEMPSGTGKTISLLSLIVAYQLYYPERRK 130
Query: 74 --YSDHKIAGLEKIEAEIKDL 92
Y + +EK E+K L
Sbjct: 131 LVYCSRTVPEIEKALIELKRL 151
>gi|222618779|gb|EEE54911.1| hypothetical protein OsJ_02439 [Oryza sativa Japonica Group]
Length = 1025
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 42 LYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
L ++ K + ESPTGTGK+L L+C L W
Sbjct: 39 LAGSIRQGKNALLESPTGTGKTLCLLCSALAW 70
>gi|319653252|ref|ZP_08007354.1| hypothetical protein HMPREF1013_03969 [Bacillus sp. 2_A_57_CT2]
gi|317395173|gb|EFV75909.1| hypothetical protein HMPREF1013_03969 [Bacillus sp. 2_A_57_CT2]
Length = 763
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 1 MASKTPNEDKEFKEQRPLAEVPSEFPFPFDAY-DIQSNFMKNLYYTLDNSKFGIFESPTG 59
+ S P D + + Q+ L + E FPF AY + Q F +Y T+ K +PTG
Sbjct: 160 LESYFPYADWKIQHQQALTKSIQELAFPFPAYRNGQRRFAGAVYKTIAEGKNLFANAPTG 219
Query: 60 TGKSLSLICGILKWYSDHKI 79
GK++S + LK + I
Sbjct: 220 IGKTISTLFPALKAIGEGHI 239
>gi|123486053|ref|XP_001324631.1| helicase [Trichomonas vaginalis G3]
gi|121907517|gb|EAY12408.1| helicase, putative [Trichomonas vaginalis G3]
Length = 880
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 27 FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q M L S+ + ESPTGTGK+LSL+ L +
Sbjct: 7 FPFSTPYPAQKAIMAKTMVALKQSENALLESPTGTGKTLSLLASSLGY 54
>gi|426200162|gb|EKV50086.1| hypothetical protein AGABI2DRAFT_183219 [Agaricus bisporus var.
bisporus H97]
Length = 792
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q +M +L TLD + + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQFYPTKRKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDL 92
+ +EK E+K L
Sbjct: 72 CSRTVPEIEKALTELKRL 89
>gi|409082328|gb|EKM82686.1| hypothetical protein AGABI1DRAFT_118129 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 792
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q +M +L TLD + + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQFYPTKRKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDL 92
+ +EK E+K L
Sbjct: 72 CSRTVPEIEKALTELKRL 89
>gi|167536176|ref|XP_001749760.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771687|gb|EDQ85349.1| predicted protein [Monosiga brevicollis MX1]
Length = 798
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q +M+ + LD + E P+GTGK++SL+ I+ +
Sbjct: 32 FPYDLIYPEQYEYMQEIKRALDAKGHALLEMPSGTGKTVSLLSLIVSYQLGYPGRLGKFI 91
Query: 74 YSDHKIAGLEKIEAEIK 90
Y + +EK+ E+K
Sbjct: 92 YCSRTVPEIEKVLGELK 108
>gi|394994901|gb|AFN42925.1| XPD1 protein, partial [Plasmodium falciparum]
Length = 437
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
E FP+D Y Q +MK L TLD+ + E PTGTGK++++ ++ Y HK
Sbjct: 10 EIFFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIF-SLITSYQYHK 64
>gi|367035588|ref|XP_003667076.1| hypothetical protein MYCTH_104059 [Myceliophthora thermophila
ATCC 42464]
gi|347014349|gb|AEO61831.1| hypothetical protein MYCTH_104059 [Myceliophthora thermophila
ATCC 42464]
Length = 799
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 14/84 (16%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS---LSLICGILKWYSD 76
++P FP+P N+M +L TLD + E P+GTGK+ LSLI ++Y
Sbjct: 7 DLPVLFPYP---RIYPGNYMVDLKKTLDAGGNCVLEMPSGTGKTVTLLSLIVAYQQYYPS 63
Query: 77 HK--------IAGLEKIEAEIKDL 92
H+ ++ +EK E+K L
Sbjct: 64 HRKLIYCSRTMSEIEKALVELKAL 87
>gi|291546863|emb|CBL19971.1| hypothetical protein CK1_19270 [Ruminococcus sp. SR1/5]
Length = 341
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 12 FKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
+K++R + +FPFP+ + Q + + +Y+T+ + K ++PTG GK++S I
Sbjct: 215 WKKERNASMKDLQFPFPYR--EGQRDIVSGVYHTVSSGKTLFVQAPTGVGKTMSAI 268
>gi|365157640|ref|ZP_09353892.1| putative DnaQ family exonuclease/DinG family helicase [Bacillus
smithii 7_3_47FAA]
gi|363623165|gb|EHL74291.1| putative DnaQ family exonuclease/DinG family helicase [Bacillus
smithii 7_3_47FAA]
Length = 935
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 1 MASKTPNEDKEFKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGT 60
M +PNE E+ + EFP F + Q M +Y TLD+S E+ TG
Sbjct: 238 MYPSSPNEKAEYMK---------EFP-QFQIREAQFEMMDCVYETLDSSNHAFIEAGTGI 287
Query: 61 GKSLSLICGILKWYSDHKI 79
GKSL+ + + HK+
Sbjct: 288 GKSLAYLLPAAFYSKQHKV 306
>gi|384246051|gb|EIE19542.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 1621
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAG 81
M + T+ N + + E+PTG+GK+LSL+C L W K G
Sbjct: 1 MAKVIQTVANRENALLEAPTGSGKTLSLLCSALSWQRKLKQEG 43
>gi|402078170|gb|EJT73519.1| DNA repair helicase rad15 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 791
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------ 73
++P FP+P Y Q +M +L TLD + E P+GTGK+ +L+ I+ +
Sbjct: 7 DLPVIFPYP-RIYPEQYAYMCDLKRTLDAGGNCVLEMPSGTGKTATLLSLIVAYQQHNPE 65
Query: 74 -----YSDHKIAGLEKIEAEIKDLEISKNETVSED 103
Y ++ +EK AE++ L + E + ++
Sbjct: 66 HRKLIYCSRTMSEIEKALAELRALMKYRAEQLGKE 100
>gi|254569252|ref|XP_002491736.1| 5' to 3' DNA helicase, involved in nucleotide excision repair and
transcription [Komagataella pastoris GS115]
gi|238031533|emb|CAY69456.1| 5' to 3' DNA helicase, involved in nucleotide excision repair and
transcription [Komagataella pastoris GS115]
gi|328351762|emb|CCA38161.1| DNA excision repair protein ERCC-2 [Komagataella pastoris CBS
7435]
Length = 773
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW---YSD 76
++P FP+P Y Q +M ++ TLD I E P+GTGK++SL+ + + Y +
Sbjct: 7 DLPVIFPYP-KIYPEQYAYMCDIKRTLDIGGNCILEMPSGTGKTISLLSLTVSYQMFYPE 65
Query: 77 HK 78
H+
Sbjct: 66 HR 67
>gi|429328706|gb|AFZ80466.1| DNA repair helicase rad3/xp-D, putative [Babesia equi]
Length = 851
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW----------- 73
FP+P Y Q +M++L LD + E PTGTGK+++L + +
Sbjct: 13 FPYP-KIYPEQLAYMRSLKNALDAHGHAVLEMPTGTGKTVALFSFVASYQLARPEVGKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDLEISKNETVSED 103
Y I +EK E+K++ +N + +D
Sbjct: 72 YCTRTIHEMEKSLLELKEVINYRNAELRKD 101
>gi|326476332|gb|EGE00342.1| multidrug resistance protein [Trichophyton tonsurans CBS 112818]
Length = 1533
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 5 TPNEDKEFKEQRPLAEVPSEFPFPFDAYDIQSNF-MKNLYYTLDNSKFGIFESPTGTGKS 63
+PN+++ KE + + +P D +++ F +KN+ T N + + PTG+GKS
Sbjct: 599 SPNKEEYRKESSSITYQNASIAWPSDTCNLEDRFVLKNINLTFPNKELSLVCGPTGSGKS 658
Query: 64 LSL 66
L L
Sbjct: 659 LLL 661
>gi|339265705|ref|XP_003366015.1| fanconi anemia group J protein [Trichinella spiralis]
gi|316965098|gb|EFV49922.1| fanconi anemia group J protein [Trichinella spiralis]
Length = 824
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
++ FPF Y Q M TL +S+ + ESPTGTGKS
Sbjct: 11 TKINFPFSPYPAQKAIMDRTLRTLKHSQNCLVESPTGTGKS 51
>gi|403220542|dbj|BAM38675.1| DNA excision-repair helicase [Theileria orientalis strain
Shintoku]
Length = 851
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 12/85 (14%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW----------- 73
FP+P Y Q +M++L LD + E PTGTGK+++L + +
Sbjct: 13 FPYP-KIYPEQIAYMRSLKNALDAKGHAVLEMPTGTGKTVALFSFVSSYQLAKPELGKLV 71
Query: 74 YSDHKIAGLEKIEAEIKDLEISKNE 98
Y I +EK E++++ +NE
Sbjct: 72 YCTRTIHEMEKSLLELREVIAYRNE 96
>gi|394994903|gb|AFN42926.1| XPD2 protein, partial [Plasmodium falciparum]
Length = 526
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
E FP+D Y Q +MK L TLD+ + E PTGTGK++++ ++ Y HK
Sbjct: 10 EIFFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIF-SLITSYQYHK 64
>gi|71032081|ref|XP_765682.1| DNA repair protein Rad3 [Theileria parva strain Muguga]
gi|68352639|gb|EAN33399.1| DNA repair protein rad3, putative [Theileria parva]
Length = 894
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSL 66
FP+P Y Q +MK+L LD+ + E PTGTGK+++L
Sbjct: 13 FPYP-KIYPEQIAYMKSLKTALDSKGHAVLEMPTGTGKTVAL 53
>gi|402592700|gb|EJW86627.1| excision repair cross-complementing rodent repair deficiency
[Wuchereria bancrofti]
Length = 772
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW--------- 73
E FP+D Y Q +M L TLD + E P+GTGK++SL+ ++ +
Sbjct: 20 EVYFPYDYIYPEQILYMSELKKTLDAKGHCLLEMPSGTGKTVSLLSLVIAYMLRFPDHLD 79
Query: 74 ---YSDHKIAGLEKIEAEIKDL 92
Y I +EK E+++L
Sbjct: 80 KLVYCSRTIPEIEKCVEELRNL 101
>gi|152975065|ref|YP_001374582.1| bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit
epsilon [Bacillus cytotoxicus NVH 391-98]
gi|152023817|gb|ABS21587.1| DnaQ family exonuclease/DinG family helicase, putative [Bacillus
cytotoxicus NVH 391-98]
Length = 929
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLIC 68
F+ + Q MK +Y L +++F + E+ TGTGK+L+ +
Sbjct: 257 FEKRETQQQMMKEIYAALQDARFSLIEAGTGTGKTLAYLL 296
>gi|42780745|ref|NP_977992.1| bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit
epsilon [Bacillus cereus ATCC 10987]
gi|42736665|gb|AAS40600.1| DnaQ family exonuclease/DinG family helicase, putative [Bacillus
cereus ATCC 10987]
Length = 934
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLIC 68
F+ + Q + MK +Y L +S+F + E+ TGTGK+L+ +
Sbjct: 257 FEKRESQQSMMKEIYTALRDSRFSLIEAGTGTGKTLAYLL 296
>gi|402552977|ref|YP_006594248.1| bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit
epsilon [Bacillus cereus FRI-35]
gi|401794187|gb|AFQ08046.1| bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit
epsilon [Bacillus cereus FRI-35]
Length = 934
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLIC 68
F+ + Q + MK +Y L +S+F + E+ TGTGK+L+ +
Sbjct: 257 FEKRESQQSMMKEIYTALRDSRFSLIEAGTGTGKTLAYLL 296
>gi|384179574|ref|YP_005565336.1| bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit
epsilon [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324325658|gb|ADY20918.1| bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit
epsilon [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 934
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLIC 68
F+ + Q + MK +Y L +S+F + E+ TGTGK+L+ +
Sbjct: 257 FEKRESQQSMMKEIYTALRDSRFSLIEAGTGTGKTLAYLL 296
>gi|423576642|ref|ZP_17552761.1| exonuclease, DNA polymerase III, epsilon subunit [Bacillus cereus
MSX-D12]
gi|401207638|gb|EJR14417.1| exonuclease, DNA polymerase III, epsilon subunit [Bacillus cereus
MSX-D12]
Length = 934
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLIC 68
F+ + Q + MK +Y L +S+F + E+ TGTGK+L+ +
Sbjct: 257 FEKRESQQSMMKEIYTALRDSRFSLIEAGTGTGKTLAYLL 296
>gi|212531953|ref|XP_002146133.1| TFIIH complex helicase Rad3, putative [Talaromyces marneffei ATCC
18224]
gi|210071497|gb|EEA25586.1| TFIIH complex helicase Rad3, putative [Talaromyces marneffei ATCC
18224]
Length = 794
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
E+ FP+P Y Q +M +L LD S + E P+GTGK+++L+ I+ + H
Sbjct: 7 ELEVLFPYP-KIYPEQWQYMCDLKKALDASGHCVLEMPSGTGKTVTLLSLIVAYQQHH 63
>gi|18026950|gb|AAL55708.1| RAD3-like DNA helicase [Plasmodium falciparum]
Length = 1056
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
E FP+D Y Q +MK L TLD+ + E PTGTGK++++ ++ Y HK
Sbjct: 10 EIFFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIF-SLITSYQYHK 64
>gi|124507219|ref|XP_001352206.1| DNA excision-repair helicase, putative [Plasmodium falciparum
3D7]
gi|23505236|emb|CAD52016.1| DNA excision-repair helicase, putative [Plasmodium falciparum
3D7]
Length = 1056
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 24 EFPFPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
E FP+D Y Q +MK L TLD+ + E PTGTGK++++ ++ Y HK
Sbjct: 10 EIFFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIF-SLITSYQYHK 64
>gi|260830571|ref|XP_002610234.1| hypothetical protein BRAFLDRAFT_286830 [Branchiostoma floridae]
gi|229295598|gb|EEN66244.1| hypothetical protein BRAFLDRAFT_286830 [Branchiostoma floridae]
Length = 763
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L +LD + E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQYSYMVELKRSLDAKGHCVLEMPSGTGKTVSLLSLIVAYLKTSPKDVCKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL-EISKNET 99
Y + +EK+ E++ L E + ET
Sbjct: 72 YCSRTVPEIEKVLEELRKLMEYYEKET 98
>gi|206974778|ref|ZP_03235693.1| putative DnaQ family exonuclease/DinG family helicase [Bacillus
cereus H3081.97]
gi|217959123|ref|YP_002337671.1| bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit
epsilon [Bacillus cereus AH187]
gi|222095271|ref|YP_002529331.1| bifunctional ATP-dependent DNA helicase/DNA polymerase iii subunit
epsilon [Bacillus cereus Q1]
gi|375283621|ref|YP_005104059.1| DnaQ family exonuclease/DinG family helicase [Bacillus cereus
NC7401]
gi|423353874|ref|ZP_17331500.1| exonuclease, DNA polymerase III, epsilon subunit [Bacillus cereus
IS075]
gi|423371622|ref|ZP_17348962.1| exonuclease, DNA polymerase III, epsilon subunit [Bacillus cereus
AND1407]
gi|423569440|ref|ZP_17545686.1| exonuclease, DNA polymerase III, epsilon subunit [Bacillus cereus
MSX-A12]
gi|206746797|gb|EDZ58189.1| putative DnaQ family exonuclease/DinG family helicase [Bacillus
cereus H3081.97]
gi|217066733|gb|ACJ80983.1| putative DnaQ family exonuclease/DinG family helicase [Bacillus
cereus AH187]
gi|221239329|gb|ACM12039.1| ATP-dependent DNA helicase [Bacillus cereus Q1]
gi|358352147|dbj|BAL17319.1| DnaQ family exonuclease/DinG family helicase, putative [Bacillus
cereus NC7401]
gi|401088449|gb|EJP96637.1| exonuclease, DNA polymerase III, epsilon subunit [Bacillus cereus
IS075]
gi|401101333|gb|EJQ09323.1| exonuclease, DNA polymerase III, epsilon subunit [Bacillus cereus
AND1407]
gi|401206695|gb|EJR13482.1| exonuclease, DNA polymerase III, epsilon subunit [Bacillus cereus
MSX-A12]
Length = 934
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLIC 68
F+ + Q + MK +Y L +S+F + E+ TGTGK+L+ +
Sbjct: 257 FEKRESQQSMMKEIYTALRDSRFSLIEAGTGTGKTLAYLL 296
>gi|423606655|ref|ZP_17582548.1| exonuclease, DNA polymerase III, epsilon subunit [Bacillus cereus
VD102]
gi|401241480|gb|EJR47868.1| exonuclease, DNA polymerase III, epsilon subunit [Bacillus cereus
VD102]
Length = 934
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLIC 68
F+ + Q + MK +Y L +S+F + E+ TGTGK+L+ +
Sbjct: 257 FEKRESQQSMMKEIYTALRDSRFSLIEAGTGTGKTLAYLL 296
>gi|229195843|ref|ZP_04322602.1| DnaQ family exonuclease/DinG family helicase [Bacillus cereus
m1293]
gi|228587616|gb|EEK45675.1| DnaQ family exonuclease/DinG family helicase [Bacillus cereus
m1293]
Length = 934
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLIC 68
F+ + Q + MK +Y L +S+F + E+ TGTGK+L+ +
Sbjct: 257 FEKRESQQSMMKEIYTALRDSRFSLIEAGTGTGKTLAYLL 296
>gi|407420088|gb|EKF38458.1| helicase-like protein, putative [Trypanosoma cruzi marinkellei]
Length = 956
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 22 PSEFPF--PFDAYDIQSNFMKNLYYTLDNSK----FGIFESPTGTGKSLSLICGILKWYS 75
PS+ + PF+ Y +Q M+ + L +S E PTG GK+L+L+ +L++
Sbjct: 8 PSDMAYDMPFEPYPVQREMMRTITNCLQSSSPVFPVAAVEVPTGCGKTLALLSSVLRYQ- 66
Query: 76 DHKIAGLEKIEAE 88
A LEK+ +
Sbjct: 67 ----ATLEKLTPQ 75
>gi|229138337|ref|ZP_04266931.1| DnaQ family exonuclease/DinG family helicase [Bacillus cereus
BDRD-ST26]
gi|228645102|gb|EEL01340.1| DnaQ family exonuclease/DinG family helicase [Bacillus cereus
BDRD-ST26]
Length = 813
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
F+ + Q + MK +Y L +S+F + E+ TGTGK+L+ +
Sbjct: 136 FEKRESQQSMMKEIYTALRDSRFSLIEAGTGTGKTLAYL 174
>gi|397566789|gb|EJK45218.1| hypothetical protein THAOC_36181, partial [Thalassiosira oceanica]
Length = 794
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+P+P + Q +L L + + + ESPTGTGKS +++C L W
Sbjct: 298 WPYP-EVMKPQKQMALHLVKALKSQRHVVLESPTGTGKSAAILCTTLAW 345
>gi|30584019|gb|AAP36258.1| Homo sapiens excision repair cross-complementing rodent repair
deficiency, complementation group 2 (xeroderma
pigmentosum D) [synthetic construct]
Length = 406
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------YSDHKIAGLEKIE 86
M+ L TLD G+ E P+GTGK++SL+ I+ + Y + +EK+
Sbjct: 1 MRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVI 60
Query: 87 AEIKDL 92
E++ L
Sbjct: 61 EELRKL 66
>gi|71756165|ref|XP_828997.1| helicase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70834383|gb|EAN79885.1| helicase-like protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 1009
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDN----SKFGIFESPTGTGKSLSLICGILKW 73
+ E + F+ Y +Q M+ ++ L++ + E PTG GK+L+L+ +L++
Sbjct: 45 MTEDEEPYVMAFEPYTVQREMMRTVHLALNSWPRHTPIAAIEVPTGCGKTLALLSSVLRY 104
Query: 74 YSDHKIAGLEK 84
AGLEK
Sbjct: 105 Q-----AGLEK 110
>gi|302771019|ref|XP_002968928.1| hypothetical protein SELMODRAFT_91042 [Selaginella moellendorffii]
gi|300163433|gb|EFJ30044.1| hypothetical protein SELMODRAFT_91042 [Selaginella moellendorffii]
Length = 768
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW----------- 73
FP+ F Y Q +M L + LD + E PTGTGK+++L+ I +
Sbjct: 12 FPYEF-IYREQYAYMVELKHALDARGHCLLEMPTGTGKTITLLSLITSYQLANPSLAKLI 70
Query: 74 YSDHKIAGLEKIEAEIKDLEISKNETV 100
Y + +EK+ E++ L + + + +
Sbjct: 71 YCTRTVHEMEKVLDELRRLHLYQEKEI 97
>gi|195947407|ref|NP_001124339.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 2 [Homo sapiens]
gi|30582605|gb|AAP35529.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 (xeroderma pigmentosum D) [Homo
sapiens]
Length = 405
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------YSDHKIAGLEKIE 86
M+ L TLD G+ E P+GTGK++SL+ I+ + Y + +EK+
Sbjct: 1 MRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVI 60
Query: 87 AEIKDL 92
E++ L
Sbjct: 61 EELRKL 66
>gi|84999674|ref|XP_954558.1| rad3-like DNA helicase-related [Theileria annulata]
gi|65305556|emb|CAI73881.1| rad3-like DNA helicase-related, putative [Theileria annulata]
Length = 894
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSL 66
FP+P Y Q +MK+L LD+ + E PTGTGK+++L
Sbjct: 13 FPYP-KIYPEQIAYMKSLKNVLDSKGHAVLEMPTGTGKTVAL 53
>gi|299470447|emb|CBN78439.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 824
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAG 81
FP+D Y Q ++M L +LD + E PTGTGK++ LI I + H G
Sbjct: 12 FPYDFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVG 67
>gi|238916505|ref|YP_002930022.1| hypothetical protein EUBELI_00562 [Eubacterium eligens ATCC 27750]
gi|238871865|gb|ACR71575.1| Hypothetical protein EUBELI_00562 [Eubacterium eligens ATCC 27750]
Length = 801
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 9 DKEFKEQRPLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
D F E+ E E FP++ + Q N ++Y +++S ++PTG GK+LS +
Sbjct: 171 DYTFDERLKRTESIRELKFPYEYREGQKNLCVSVYRAIEDSANLYIQAPTGVGKTLSTV 229
>gi|297277341|ref|XP_002808245.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase subunit-like [Macaca mulatta]
Length = 739
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------YSDHKIAGLEKIE 86
M+ L TLD G+ E P+GTGK++SL+ I+ + Y + +EK+
Sbjct: 1 MRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVI 60
Query: 87 AEIKDL 92
E++ L
Sbjct: 61 EELRKL 66
>gi|302816593|ref|XP_002989975.1| hypothetical protein SELMODRAFT_269587 [Selaginella moellendorffii]
gi|300142286|gb|EFJ08988.1| hypothetical protein SELMODRAFT_269587 [Selaginella moellendorffii]
Length = 752
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW----------- 73
FP+ F Y Q +M L + LD + E PTGTGK+++L+ I +
Sbjct: 12 FPYEF-IYREQYAYMVELKHALDARGHCLLEMPTGTGKTITLLSLITSYQLANPSLAKLI 70
Query: 74 YSDHKIAGLEKIEAEIKDLEISKNETV 100
Y + +EK+ E++ L + + + +
Sbjct: 71 YCTRTVHEMEKVLDELRRLHLYQEKEI 97
>gi|440801246|gb|ELR22266.1| BRIP1 family protein [Acanthamoeba castellanii str. Neff]
Length = 187
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 10/59 (16%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGI-FESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPF Y Q M ++G+ + GTGK+LSL+C L W K A L++
Sbjct: 10 FPFTPYPSQLLMM---------DRYGVGLQIGHGTGKTLSLLCAALAWQEKEKAAALQR 59
>gi|21322260|gb|AAM45142.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 (xeroderma pigmentosum D) [Homo
sapiens]
Length = 736
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------YSDHKIAGLEKIE 86
M+ L TLD G+ E P+GTGK++SL+ I+ + Y + +EK+
Sbjct: 1 MRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVI 60
Query: 87 AEIKDL 92
E++ L
Sbjct: 61 EELRKL 66
>gi|67470878|ref|XP_651401.1| DNA repair helicase [Entamoeba histolytica HM-1:IMSS]
gi|56468131|gb|EAL46015.1| DNA repair helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449710566|gb|EMD49619.1| regulator of telomere elongation helicase rtel1, putative
[Entamoeba histolytica KU27]
Length = 1033
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ Y Q M ++ + K + ESPTGTGK+L L+ L +
Sbjct: 86 FPYQPYQPQIEMMNSIQQAVKEGKHLLMESPTGTGKTLVLLHSTLTF 132
>gi|261334932|emb|CBH17926.1| helicase-like protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 965
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDN----SKFGIFESPTGTGKSLSLICGILKW 73
+ E + F+ Y +Q M+ ++ L++ + E PTG GK+L+L+ +L++
Sbjct: 1 MTEDEEPYVMAFEPYTVQREMMRTVHLALNSWPRHTPIAAIEVPTGCGKTLALLSSVLRY 60
Query: 74 YSDHKIAGLEK 84
AGLEK
Sbjct: 61 Q-----AGLEK 66
>gi|328855625|gb|EGG04750.1| hypothetical protein MELLADRAFT_108080 [Melampsora
larici-populina 98AG31]
Length = 795
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
E FP+D I M +L TLD + E P+GTGK++SL+ I+ + +H
Sbjct: 9 EIIFPYD--KIYPEQMSDLKRTLDVGGHCVLEMPSGTGKTISLLSLIVAYQQNH 60
>gi|296417607|ref|XP_002838444.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634383|emb|CAZ82635.1| unnamed protein product [Tuber melanosporum]
Length = 807
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 61 GKSLSLICGILKWYSDHKIAGLEKIEAEIKDLEISKNETVSEDWIEQ 107
GKSLSLICG L W +HK + IE+++K+ + + DW++Q
Sbjct: 24 GKSLSLICGALTWLREHKS---KSIESQLKE---DGEDDGAPDWVKQ 64
>gi|296814878|ref|XP_002847776.1| ATP-dependent DNA helicase MER3 [Arthroderma otae CBS 113480]
gi|238840801|gb|EEQ30463.1| ATP-dependent DNA helicase MER3 [Arthroderma otae CBS 113480]
Length = 1443
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 25 FPFP-FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
FPFP F+A IQS +Y+ +DN + +PTG+GK++ + I K SD K
Sbjct: 220 FPFPVFNA--IQSKTFSIIYHRVDNV---VLSAPTGSGKTVIMELAICKLVSDLK 269
>gi|228990657|ref|ZP_04150622.1| DnaQ family exonuclease/DinG family helicase [Bacillus
pseudomycoides DSM 12442]
gi|228769183|gb|EEM17781.1| DnaQ family exonuclease/DinG family helicase [Bacillus
pseudomycoides DSM 12442]
Length = 930
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLIC 68
F+ + Q MK +Y L +S+F + E+ TGTGK+L+ +
Sbjct: 257 FEQRESQQRMMKEIYTALRDSRFSLIEAGTGTGKTLAYLL 296
>gi|228996755|ref|ZP_04156392.1| DnaQ family exonuclease/DinG family helicase [Bacillus mycoides
Rock3-17]
gi|228763074|gb|EEM11984.1| DnaQ family exonuclease/DinG family helicase [Bacillus mycoides
Rock3-17]
Length = 930
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLIC 68
F+ + Q MK +Y L +S+F + E+ TGTGK+L+ +
Sbjct: 257 FEQRESQQRMMKEIYTALRDSRFSLIEAGTGTGKTLAYLL 296
>gi|71660791|ref|XP_822108.1| DNA repair helicase [Trypanosoma cruzi strain CL Brener]
gi|70887501|gb|EAO00257.1| DNA repair helicase, putative [Trypanosoma cruzi]
Length = 1037
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 26 PFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
PFPF Y +Q + M + L + ESPTGTGK+ L+ +L
Sbjct: 10 PFPFQPYPLQLHAMGAIRDGLAGGDVVVLESPTGTGKTQVLLNSVL 55
>gi|449455726|ref|XP_004145602.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
homolog [Cucumis sativus]
Length = 1042
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYSDHKI 79
FPF Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W + KI
Sbjct: 34 FPFRPYGSQLEFMDRVISTLDRAQREGHCHALLESPTGTGKSLSLLCSSLAWQKNFKI 91
>gi|449519585|ref|XP_004166815.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
homolog [Cucumis sativus]
Length = 1041
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSK-----FGIFESPTGTGKSLSLICGILKWYSDHKI 79
FPF Y Q FM + TLD ++ + ESPTGTGKSLSL+C L W + KI
Sbjct: 34 FPFRPYGSQLEFMDRVISTLDRAQREGHCHALLESPTGTGKSLSLLCSSLAWQKNFKI 91
>gi|401412199|ref|XP_003885547.1| hypothetical protein NCLIV_059440 [Neospora caninum Liverpool]
gi|325119966|emb|CBZ55519.1| hypothetical protein NCLIV_059440 [Neospora caninum Liverpool]
Length = 1080
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKI 79
EV FP+ F Y Q +++ L TLD + E PTGTGK+++L+ + + H
Sbjct: 8 EVTVYFPYDF-IYPEQYAYIRALKQTLDAKGHAVLEMPTGTGKTVALLSLLTSYQLTHPR 66
Query: 80 AG 81
G
Sbjct: 67 LG 68
>gi|229084648|ref|ZP_04216916.1| DnaQ family exonuclease/DinG family helicase [Bacillus cereus
Rock3-44]
gi|228698671|gb|EEL51388.1| DnaQ family exonuclease/DinG family helicase [Bacillus cereus
Rock3-44]
Length = 930
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
F+ + Q MK +Y L +S+F + E+ TGTGK+L+ +
Sbjct: 257 FEKRESQQRMMKEVYTALRDSRFSLIEAGTGTGKTLAYL 295
>gi|225437002|ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis vinifera]
Length = 758
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L LD + E PTGTGK+++L+ I +
Sbjct: 12 FPYDNIYPEQYSYMVELKRALDAKGHALLEMPTGTGKTIALLSLITSYALSKPSNPIKLL 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK AE++ L
Sbjct: 72 YCTRTVHEMEKTLAELRLL 90
>gi|396081490|gb|AFN83106.1| Rad3/XPD DNA repair helicase [Encephalitozoon romaleae SJ-2008]
Length = 743
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 27 FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
FP+D+ Y Q +M+ + +LDN + E P+GTGK+++L+
Sbjct: 12 FPYDSVYPEQLKYMREIKRSLDNRGHCLLEMPSGTGKTVALL 53
>gi|407410437|gb|EKF32865.1| DNA repair helicase, putative [Trypanosoma cruzi marinkellei]
Length = 1124
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 26 PFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
PFPF Y +Q + M + L + ESPTGTGK+ L+ +L
Sbjct: 97 PFPFQPYPLQLHAMGAIRDGLAAGDVVVLESPTGTGKTQVLLNSVL 142
>gi|261330675|emb|CBH13660.1| TFIIH basal transcription factor complex helicase subunit,
putative [Trypanosoma brucei gambiense DAL972]
Length = 819
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS---LSLICGILKWY 74
+ +VP FP+ + Y Q +M L LD + E P+GTGK+ LSL+ L +
Sbjct: 21 IEDVPVLFPYEY-IYPEQLEYMTELKKGLDQGGHMVLEMPSGTGKTTTLLSLLIAYLHHH 79
Query: 75 SDHK 78
+D K
Sbjct: 80 ADEK 83
>gi|72393255|ref|XP_847428.1| TFIIH basal transcription factor complex helicase subunit
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62175150|gb|AAX69298.1| TFIIH basal transcription factor complex helicase subunit,
putative [Trypanosoma brucei]
gi|70803458|gb|AAZ13362.1| TFIIH basal transcription factor complex helicase subunit,
putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 819
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS---LSLICGILKWY 74
+ +VP FP+ + Y Q +M L LD + E P+GTGK+ LSL+ L +
Sbjct: 21 IEDVPVLFPYEY-IYPEQLEYMTELKKGLDQGGHMVLEMPSGTGKTTTLLSLLIAYLHHH 79
Query: 75 SDHK 78
+D K
Sbjct: 80 ADEK 83
>gi|358057423|dbj|GAA96772.1| hypothetical protein E5Q_03443 [Mixia osmundae IAM 14324]
Length = 797
Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+D Y Q ++ +L TLD + E P+GTGK++SL+ I+ + Y
Sbjct: 12 FPYDRIYPEQYAYVCDLKRTLDAGGNCVLEMPSGTGKTVSLLSLIVAYQQHYPERRKLVY 71
Query: 75 SDHKIAGLEKIEAEIKDL 92
+ +EK AE+K L
Sbjct: 72 CSRTVPEIEKALAELKRL 89
>gi|302511421|ref|XP_003017662.1| hypothetical protein ARB_04544 [Arthroderma benhamiae CBS 112371]
gi|291181233|gb|EFE37017.1| hypothetical protein ARB_04544 [Arthroderma benhamiae CBS 112371]
Length = 1531
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 5 TPNEDKEFKEQRPLAEVPSEFPFPFDAYDIQSNF-MKNLYYTLDNSKFGIFESPTGTGKS 63
+PN+++ K+ + + +P D +++ F +KN+ T N + + PTG+GKS
Sbjct: 597 SPNKEEYRKDSSSITYQNASIAWPSDTCNLEDRFVLKNINLTFPNKELSLVCGPTGSGKS 656
Query: 64 L---------SLICGIL 71
L L+CG +
Sbjct: 657 LLLGSIFGEADLVCGAI 673
>gi|296086736|emb|CBI32371.3| unnamed protein product [Vitis vinifera]
Length = 922
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L LD + E PTGTGK+++L+ I +
Sbjct: 12 FPYDNIYPEQYSYMVELKRALDAKGHALLEMPTGTGKTIALLSLITSYALSKPSNPIKLL 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK AE++ L
Sbjct: 72 YCTRTVHEMEKTLAELRLL 90
>gi|71661269|ref|XP_817658.1| DNA repair helicase [Trypanosoma cruzi strain CL Brener]
gi|70882863|gb|EAN95807.1| DNA repair helicase, putative [Trypanosoma cruzi]
Length = 1037
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 26 PFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
PFPF Y +Q + M + L + ESPTGTGK+ L+ +L
Sbjct: 10 PFPFQPYPLQLHAMGAIRDGLAAGDVVVLESPTGTGKTQVLLNSVL 55
>gi|323456743|gb|EGB12609.1| hypothetical protein AURANDRAFT_51952 [Aureococcus
anophagefferens]
Length = 760
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 27 FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-----------Y 74
FP+DA Y Q ++ L LD + E PTGTGK+ L+ I + Y
Sbjct: 12 FPYDALYPEQFTYICELKKALDAEGHALLEMPTGTGKTACLLTLITAYQYAHPEMGKLIY 71
Query: 75 SDHKIAGLEKIEAEIKDLEISKN 97
+ +EK AE+K L ++
Sbjct: 72 CTRTVPEMEKCLAELKRLRAYRD 94
>gi|303389494|ref|XP_003072979.1| Rad3/XPD DNA repair helicase [Encephalitozoon intestinalis ATCC
50506]
gi|303302123|gb|ADM11619.1| Rad3/XPD DNA repair helicase [Encephalitozoon intestinalis ATCC
50506]
Length = 743
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 27 FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
FP+D+ Y Q +M+ + +LDN+ + E P+GTGK+++L+
Sbjct: 12 FPYDSVYPEQLKYMREVKRSLDNNGHCLIEMPSGTGKTVALL 53
>gi|424513271|emb|CCO66855.1| predicted protein [Bathycoccus prasinos]
Length = 770
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 39 MKNLYYTLDNSKFGIFESPTGTGKSLSLI-------------CGILKWYSDHKIAGLEKI 85
M L + LD G E PTGTGK+++L+ CG L Y + +EK+
Sbjct: 1 MIELKHALDAKGHGALEMPTGTGKTITLLSLITSYQLQYPHSCGKL-IYCTRTVPEMEKV 59
Query: 86 EAEIKDLEISKNETVSE 102
AE+K L+ + E V +
Sbjct: 60 LAELKVLQKYREEHVEK 76
>gi|327296940|ref|XP_003233164.1| multidrug resistance protein [Trichophyton rubrum CBS 118892]
gi|326464470|gb|EGD89923.1| multidrug resistance protein [Trichophyton rubrum CBS 118892]
Length = 1534
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 5 TPNEDKEFKEQRPLAEVPSEFPFPFDAYDIQSNF-MKNLYYTLDNSKFGIFESPTGTGKS 63
+PN+++ K+ + + +P D +++ F +KN+ T N + + PTG+GKS
Sbjct: 599 SPNKEEYRKDSSSITYQNASIAWPSDTSNLEDRFILKNINLTFPNKELSLVCGPTGSGKS 658
Query: 64 LSL 66
L L
Sbjct: 659 LLL 661
>gi|339265251|ref|XP_003366249.1| fanconi anemia group J protein [Trichinella spiralis]
gi|316960356|gb|EFV47942.1| fanconi anemia group J protein [Trichinella spiralis]
Length = 71
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKS 63
FPF Y Q M TL +S+ + ESPTGTGKS
Sbjct: 15 FPFSPYPAQKAIMDRTLRTLKHSQNCLVESPTGTGKS 51
>gi|224062561|ref|XP_002300852.1| predicted protein [Populus trichocarpa]
gi|222842578|gb|EEE80125.1| predicted protein [Populus trichocarpa]
Length = 758
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M L LD + E PTGTGK+++L+ I +
Sbjct: 12 FPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYTISKPQGAIKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK AE+K L
Sbjct: 72 YCTRTVHEMEKTLAELKLL 90
>gi|294879226|ref|XP_002768609.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983]
gi|239871280|gb|EER01327.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983]
Length = 887
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 27 FPFDA-YDIQSNFMKNLYYTLDNSKF-GIFESPTGTGKSLSLICGILKWYSDHKIAG 81
FP+DA Y Q +M L LD S G+ E PTGTGK+++++ I + H G
Sbjct: 15 FPYDAIYPEQVQYMHYLKQALDASHGQGLIEMPTGTGKTVTIMSLITSYQLSHPQMG 71
>gi|407849880|gb|EKG04460.1| DNA repair helicase, putative [Trypanosoma cruzi]
Length = 1037
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 26 PFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGIL 71
PFPF Y +Q + M + L + ESPTGTGK+ L+ +L
Sbjct: 10 PFPFQPYPLQLHAMGAIRDGLAAGDVVVLESPTGTGKTQVLLNSVL 55
>gi|342182871|emb|CCC92351.1| putative DNA excision repair protein, Transcription factor II H
complex, XPD subunit [Trypanosoma congolense IL3000]
Length = 811
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
+ +VP FP+ + Y Q +M L LD + E P+GTGK+ +L+ ++ + H
Sbjct: 5 IEDVPVLFPYEY-IYPEQLEYMTELKRGLDQGGHMVLEMPSGTGKTTTLLSLLIAYVHHH 63
>gi|401826548|ref|XP_003887367.1| Rad3-like DNA repair helicase [Encephalitozoon hellem ATCC 50504]
gi|395459885|gb|AFM98386.1| Rad3-like DNA repair helicase [Encephalitozoon hellem ATCC 50504]
Length = 742
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 27 FPFDA-YDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLI 67
FP+D+ Y Q +M+ + +LDN + E P+GTGK+++L+
Sbjct: 12 FPYDSVYPEQLKYMREIKRSLDNKGHCLIEMPSGTGKTVALL 53
>gi|229160592|ref|ZP_04288587.1| DnaQ family exonuclease/DinG family helicase [Bacillus cereus
R309803]
gi|228623002|gb|EEK79833.1| DnaQ family exonuclease/DinG family helicase [Bacillus cereus
R309803]
Length = 933
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 29 FDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLIC 68
F+ + Q MK +Y L +S+F + E+ TGTGK+L+ +
Sbjct: 257 FERRESQQMMMKEIYTALRDSRFSLIEAGTGTGKTLAYLL 296
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,889,105,694
Number of Sequences: 23463169
Number of extensions: 73300558
Number of successful extensions: 167737
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 266
Number of HSP's that attempted gapping in prelim test: 166740
Number of HSP's gapped (non-prelim): 1186
length of query: 115
length of database: 8,064,228,071
effective HSP length: 82
effective length of query: 33
effective length of database: 6,140,248,213
effective search space: 202628191029
effective search space used: 202628191029
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)