BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14273
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96FC9|DDX11_HUMAN Probable ATP-dependent RNA helicase DDX11 OS=Homo sapiens
GN=DDX11 PE=1 SV=1
Length = 970
Score = 80.5 bits (197), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>sp|A8MPP1|D11L8_HUMAN Putative ATP-dependent RNA helicase DDX11-like protein 8 OS=Homo
sapiens GN=DDX11L8 PE=3 SV=1
Length = 907
Score = 79.7 bits (195), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEK 84
FPFPF Y IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K
Sbjct: 13 FPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKK 69
Query: 85 IEAEIKDLE 93
E E + LE
Sbjct: 70 REEEARLLE 78
>sp|Q1E5T3|CHL1_COCIM ATP-dependent RNA helicase CHL1 OS=Coccidioides immitis (strain
RS) GN=CHL1 PE=3 SV=1
Length = 861
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
F P+ YDIQ FM++LY ++ K GIFESPTGTGKSLSLICG L W DHK
Sbjct: 8 FYHPYSPYDIQVQFMRSLYTCIEECKVGIFESPTGTGKSLSLICGSLTWLRDHK 61
>sp|A1D8E4|CHL1_NEOFI ATP-dependent RNA helicase chl1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=chl1
PE=3 SV=1
Length = 861
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 41/66 (62%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
+ P F P+ YDIQ FM+ LY L+ K +FESPTGTGKSLSLICG + W +H
Sbjct: 1 MGSQPQNFNHPYSPYDIQLQFMRALYTCLEEGKVAVFESPTGTGKSLSLICGSMTWLREH 60
Query: 78 KIAGLE 83
K L+
Sbjct: 61 KRKALQ 66
>sp|A2QY22|CHL1_ASPNC ATP-dependent RNA helicase chl1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=chl1 PE=3 SV=1
Length = 874
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
++F P+ YDIQ M+ LY L+ K +FESPTGTGKSLSLICG L W DHK +
Sbjct: 6 NDFHHPYSPYDIQLQLMRALYSCLEQGKVAVFESPTGTGKSLSLICGSLTWLRDHKRSAF 65
Query: 83 E 83
+
Sbjct: 66 Q 66
>sp|O14147|CHL1_SCHPO ATP-dependent RNA helicase chl1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=chl1 PE=3 SV=1
Length = 844
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
+ F P+ YDIQ FM++LY ++ + K GIFESPTGTGKSLSLIC L W +H L
Sbjct: 11 TNFHHPYTPYDIQLEFMRSLYSSISDGKIGIFESPTGTGKSLSLICASLTWLDEHGGVLL 70
Query: 83 EKIEAEIKDLEISKNETVSE--DWIEQQSFE 111
E E + K+ T S+ DW+ +Q +
Sbjct: 71 EDNEKSNDN----KSNTSSKIPDWVLEQDLK 97
>sp|A5DUW8|CHL1_LODEL ATP-dependent RNA helicase CHL1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=CHL1 PE=3 SV=1
Length = 892
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYS 75
P A ++ P+D YDIQ FM LY TL N K G+FESPTGTGK+LS+IC + W
Sbjct: 7 PSARTCRDYHHPYDPYDIQLQFMDALYETLQNGYKIGMFESPTGTGKTLSIICSSMTWLR 66
Query: 76 DHK 78
D+K
Sbjct: 67 DYK 69
>sp|A7ERG1|CHL1_SCLS1 ATP-dependent RNA helicase CHL1 OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=CHL1 PE=3 SV=1
Length = 902
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 38/62 (61%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
+F P+ Y IQ FM+ +Y L+ K GI ESPTGTGKSLSLICG L W D K E
Sbjct: 18 DFHHPYTPYPIQEKFMQTVYDVLEQGKIGILESPTGTGKSLSLICGSLTWLRDFKRKEFE 77
Query: 84 KI 85
I
Sbjct: 78 GI 79
>sp|Q6CAX3|CHL1_YARLI ATP-dependent RNA helicase CHL1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=CHL1 PE=3 SV=1
Length = 803
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
EF P+ Y IQ +FM+ LY +++ K GIFESPTGTGK+LSLICG + W +K
Sbjct: 8 EFSHPYTPYPIQVDFMEALYDCIESYKVGIFESPTGTGKTLSLICGSMTWLRKNK 62
>sp|Q6CIF0|CHL1_KLULA ATP-dependent RNA helicase CHL1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=CHL1 PE=3 SV=1
Length = 807
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
F P+ YDIQ+ M+++Y L++ K GIFESPTGTGK+LSLIC + W +HK LE
Sbjct: 5 FHHPYQPYDIQTQLMEHIYELLNSGKKVGIFESPTGTGKTLSLICSTVTWLREHK---LE 61
Query: 84 KIEAEIKD 91
K+ +++ +
Sbjct: 62 KLNSKVDN 69
>sp|Q6BZD9|CHL1_DEBHA ATP-dependent RNA helicase CHL1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CHL1 PE=3 SV=2
Length = 820
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
++ PF+ YDIQ M +Y +DN K G+FESPTGTGK+LSLIC + W ++K
Sbjct: 15 KYNHPFEPYDIQIQLMDAIYDAIDNYKIGLFESPTGTGKTLSLICSSMTWLREYK 69
>sp|A3LN13|CHL1_PICST ATP-dependent RNA helicase CHL1 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=CHL1 PE=3 SV=2
Length = 835
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYSDHK 78
+ + P+ YDIQ M +Y T+DN K G+FESPTGTGK+LS+IC + W D+K
Sbjct: 10 NRYSHPYKPYDIQIQLMDAIYDTIDNGYKIGLFESPTGTGKTLSIICSTMTWLRDYK 66
>sp|Q6AXC6|DDX11_MOUSE Probable ATP-dependent RNA helicase DDX11 OS=Mus musculus
GN=Ddx11 PE=2 SV=1
Length = 880
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 34 IQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAE 88
IQ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K++AE
Sbjct: 22 IQKDFMAELYKVLEGGKIGIFESPTGTGKSLSLICGALSWLRDFE---KKKLQAE 73
>sp|Q750G3|CHL1_ASHGO ATP-dependent RNA helicase CHL1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CHL1
PE=3 SV=1
Length = 801
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 24 EFPFPFDAYDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYSDHKIAGL 82
EF PF Y IQ M+ +Y L++ K GIFESPTGTGK+LSLIC W +HK L
Sbjct: 5 EFYHPFTPYRIQLELMQQIYGLLESGKKMGIFESPTGTGKTLSLICSTFTWLREHKAGYL 64
Query: 83 E 83
+
Sbjct: 65 Q 65
>sp|Q6FKT4|CHL1_CANGA ATP-dependent RNA helicase CHL1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CHL1 PE=3 SV=1
Length = 830
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDN--SKFGIFESPTGTGKSLSLICGILKWYSDHKIA 80
++F P+ YDIQ + M+ +Y TL N K I ESPTGTGK+LSLIC L W D+K
Sbjct: 5 TKFHHPYSPYDIQLDLMQCVYDTLANPVKKVAIVESPTGTGKTLSLICSTLTWLRDNKAD 64
Query: 81 GLEKIEA 87
L ++
Sbjct: 65 ILSSVDT 71
>sp|Q16X92|RTEL1_AEDAE Regulator of telomere elongation helicase 1 homolog OS=Aedes
aegypti GN=AAEL008960 PE=3 SV=1
Length = 1010
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FPF+ Y +Q ++M + L NS G+ ESPTGTGK+LSL+C L W K +
Sbjct: 13 FPFEPYQVQRDYMSRVIECLQNSTNGVLESPTGTGKTLSLLCSSLAWVLHKKAQVQANMR 72
Query: 87 AEIKDLE 93
I DL+
Sbjct: 73 TNITDLK 79
>sp|Q92771|DDX12_HUMAN Putative ATP-dependent RNA helicase DDX12 OS=Homo sapiens
GN=DDX12P PE=5 SV=3
Length = 950
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 35 QSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIEAEIKDLE 93
+ +FM LY L+ K GIFESPTGTGKSLSLICG L W D + +K E E + LE
Sbjct: 42 KEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFE---QKKREEEARLLE 97
>sp|B4L1Z2|RTEL1_DROMO Regulator of telomere elongation helicase 1 homolog OS=Drosophila
mojavensis GN=GI15901 PE=3 SV=1
Length = 1014
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 7/75 (9%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWY--- 74
+A +P FPF + Y++Q FM+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYEVQRAFMEKVIMCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTR 63
Query: 75 -SDHKIAGLEKIEAE 88
S+H+I ++K++ E
Sbjct: 64 QSEHQI-NMQKLQME 77
>sp|A6ZWN8|CHL1_YEAS7 ATP-dependent RNA helicase CHL1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=CHL1 PE=3 SV=1
Length = 861
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
E F P+ YDIQ M+ +Y L + K I ESPTGTGK+LSLIC + W +K
Sbjct: 5 EYSETFYHPYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNK 64
Query: 79 IAGLEKIEAEIKDLEISKNETVSE---DWI 105
++E IK E +E +S+ DW+
Sbjct: 65 ADIFTRMETNIKTNE-DDSENLSDDEPDWV 93
>sp|P22516|CHL1_YEAST ATP-dependent RNA helicase CHL1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CHL1 PE=1 SV=1
Length = 861
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 20 EVPSEFPFPFDAYDIQSNFMKNLYYTL-DNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
E F P+ YDIQ M+ +Y L + K I ESPTGTGK+LSLIC + W +K
Sbjct: 5 EYSETFYHPYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNK 64
Query: 79 IAGLEKIEAEIKDLEISKNETVSE---DWI 105
++E IK E +E +S+ DW+
Sbjct: 65 ADIFTRMETNIKTNE-DDSENLSDDEPDWV 93
>sp|B0W9F4|RTEL1_CULQU Regulator of telomere elongation helicase 1 homolog OS=Culex
quinquefasciatus GN=CPIJ003765 PE=3 SV=1
Length = 978
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
FPF+ Y +Q ++M + L NS G+ ESPTGTGK+LSL+C L W HK A ++
Sbjct: 13 FPFEPYQVQRDYMARVIECLQNSSNGVLESPTGTGKTLSLLCSSLAWIL-HKKAQVQ 68
>sp|A5DNW6|CHL1_PICGU ATP-dependent RNA helicase CHL1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 /
NBRC 10279 / NRRL Y-324) GN=CHL1 PE=3 SV=2
Length = 825
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYSDHK 78
+ P+ YDIQ M +Y T+ N K G+FESPTGTGK+LS+IC + W ++K
Sbjct: 10 YNHPYKPYDIQVQLMDAIYDTIQNKYKVGLFESPTGTGKTLSIICSSMTWLRNYK 64
>sp|B4JNS2|RTEL1_DROGR Regulator of telomere elongation helicase 1 homolog OS=Drosophila
grimshawi GN=GH24089 PE=3 SV=1
Length = 986
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + YD+Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYDVQRAYMEKVIICLRDGTNGVLESPTGTGKTLSLLCSTLGW 59
>sp|Q7QEI1|RTEL1_ANOGA Regulator of telomere elongation helicase 1 homolog OS=Anopheles
gambiae GN=AGAP000634 PE=3 SV=5
Length = 991
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y++Q N+M + L N G+ ESPTGTGK+LSL+C + W
Sbjct: 13 FPFEPYELQKNYMAKVIECLQNKTNGVLESPTGTGKTLSLLCSSMAW 59
>sp|Q93575|RTEL1_CAEEL Regulator of telomere elongation helicase 1 homolog
OS=Caenorhabditis elegans GN=rtel-1 PE=3 SV=3
Length = 994
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
FPF+ Y+ Q FMKN+ LD ESPTGTGK+LSL+C L W K
Sbjct: 21 FPFEPYECQRIFMKNVVDVLDRKLDAALESPTGTGKTLSLLCSTLAWVQRQK 72
>sp|B4NDG5|RTEL1_DROWI Regulator of telomere elongation helicase 1 homolog OS=Drosophila
willistoni GN=GK24923 PE=3 SV=1
Length = 998
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
+A +P FPF + Y++Q FM+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYEVQRAFMEKVIICLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTR 63
Query: 78 KIAGLEKIEAEIKDLEISKNET 99
+ + + +I+ L+ + N T
Sbjct: 64 Q----SEQQKQIRKLQDAANNT 81
>sp|Q29FS3|RTEL1_DROPS Regulator of telomere elongation helicase 1 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA17940 PE=3 SV=2
Length = 1009
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y++Q ++M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYNVQRDYMEKVIICLRDGTNGVLESPTGTGKTLSLLCASLAW 59
>sp|B4GU19|RTEL1_DROPE Regulator of telomere elongation helicase 1 homolog OS=Drosophila
persimilis GN=GL14463 PE=3 SV=1
Length = 1009
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y++Q ++M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYNVQRDYMEKVIICLRDGTNGVLESPTGTGKTLSLLCASLAW 59
>sp|Q5AD67|CHL1_CANAL ATP-dependent RNA helicase CHL1 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=CHL1 PE=3 SV=1
Length = 842
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNS-KFGIFESPTGTGKSLSLICGILKWYSDHK 78
+ P+ YDIQ M +Y T++N K G+FESPTGTGK+LS+IC + W K
Sbjct: 10 YNHPYTPYDIQIQLMDAIYNTIENGYKIGLFESPTGTGKTLSIICSSMTWLRTFK 64
>sp|Q9W484|RTEL1_DROME Regulator of telomere elongation helicase 1 homolog OS=Drosophila
melanogaster GN=CG4078 PE=1 SV=1
Length = 985
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y +Q +M+ + + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>sp|A8WS58|RTEL1_CAEBR Regulator of telomere elongation helicase 1 homolog
OS=Caenorhabditis briggsae GN=rtel-1 PE=3 SV=1
Length = 994
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 23 SEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+ FPF+ Y+ Q FMKN+ LD ESPTGTGK+LSL+C L W
Sbjct: 17 TSIKFPFEPYECQRIFMKNVIDVLDMKLDAALESPTGTGKTLSLLCSTLAW 67
>sp|B3MSG8|RTEL1_DROAN Regulator of telomere elongation helicase 1 homolog OS=Drosophila
ananassae GN=GF20802 PE=3 SV=1
Length = 994
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y +Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYPVQRAYMEKVIQCLKDGTNGVLESPTGTGKTLSLLCSSLAW 59
>sp|B4PZB4|RTEL1_DROYA Regulator of telomere elongation helicase 1 homolog OS=Drosophila
yakuba GN=GE16425 PE=3 SV=1
Length = 985
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 18 LAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
+A +P FPF + Y +Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 6 IAGIPVHFPF--EPYPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>sp|A7TTL0|CHL1_VANPO ATP-dependent RNA helicase CHL1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=CHL1 PE=3 SV=1
Length = 829
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 25 FPFPFDAYDIQSNFMKNLYYTLDNSK-FGIFESPTGTGKSLSLICGILKWYSDHKIAGLE 83
F P+ Y+IQ M+ +Y L + K I ESPTGTGK+LSL+C + W D+K+ L
Sbjct: 5 FNHPYQPYEIQLQLMQCIYGALSSGKKIAILESPTGTGKTLSLLCSSITWLRDNKLHLLS 64
Query: 84 K 84
+
Sbjct: 65 Q 65
>sp|B4M891|RTEL1_DROVI Regulator of telomere elongation helicase 1 homolog OS=Drosophila
virilis GN=GJ16649 PE=3 SV=1
Length = 1005
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y++Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 13 FPFEPYEVQRAYMEKVIMCLRDGTNGVLESPTGTGKTLSLLCASLAW 59
>sp|B4I0K4|RTEL1_DROSE Regulator of telomere elongation helicase 1 homolog OS=Drosophila
sechellia GN=GM12432 PE=3 SV=1
Length = 966
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y +Q +M+ + + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 13 FPFEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>sp|B3NSW1|RTEL1_DROER Regulator of telomere elongation helicase 1 homolog OS=Drosophila
erecta GN=GG18780 PE=3 SV=1
Length = 985
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF+ Y +Q +M+ + L + G+ ESPTGTGK+LSL+C L W
Sbjct: 13 FPFEPYPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAW 59
>sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio
GN=rtel1 PE=3 SV=1
Length = 1177
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDH 77
FPF Y Q ++M + L G+ ESPTGTGK+L L+C L W DH
Sbjct: 13 FPFTPYPCQEDYMSKVIECLQKKVNGVLESPTGTGKTLCLLCSTLAW-RDH 62
>sp|A7UXD4|CHL1_NEUCR ATP-dependent RNA helicase chl-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=chl-1 PE=3 SV=1
Length = 1073
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 48 NSKFGIFESPTGTGKSLSLICGILKWYSDHK 78
+++ +FESPTGTGKSLSLICG L W +HK
Sbjct: 147 HAQIALFESPTGTGKSLSLICGSLTWLRNHK 177
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 22 PSEFPFPFDAYDIQSNFMKNLYYTLDNS 49
P++F P+ Y IQ+ FM+ LY LD +
Sbjct: 32 PTDFNHPYTPYPIQTAFMQTLYSVLDRT 59
>sp|A4K436|RTEL1_BOVIN Regulator of telomere elongation helicase 1 OS=Bos taurus
GN=RTEL1 PE=2 SV=1
Length = 1216
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAW 59
>sp|Q5SXJ3|FANCJ_MOUSE Fanconi anemia group J protein homolog OS=Mus musculus GN=Brip1
PE=2 SV=1
Length = 1174
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP AY Q M ++ L++S+ + ESPTG+GKSL+L+C L W
Sbjct: 17 FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAW 63
>sp|Q3YK19|FANCJ_CHICK Fanconi anemia group J protein homolog OS=Gallus gallus GN=BRIP1
PE=2 SV=1
Length = 1252
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKWYSDHKIAGLEKIE 86
FP AY Q M + L+N + + ESPTG+GKSL+L+C L W L K
Sbjct: 17 FPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSALSWQQSLYEKSLLKSS 76
Query: 87 AEIKDLE 93
E +D E
Sbjct: 77 CEKEDRE 83
>sp|Q0VGM9|RTEL1_MOUSE Regulator of telomere elongation helicase 1 OS=Mus musculus
GN=Rtel1 PE=2 SV=2
Length = 1203
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>sp|Q9NZ71|RTEL1_HUMAN Regulator of telomere elongation helicase 1 OS=Homo sapiens
GN=RTEL1 PE=1 SV=2
Length = 1219
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FPF Y Q +M + L GI ESPTGTGK+L L+C L W
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAW 59
>sp|Q9BX63|FANCJ_HUMAN Fanconi anemia group J protein OS=Homo sapiens GN=BRIP1 PE=1 SV=1
Length = 1249
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW 73
FP+ AY Q M ++ L++ + + ESPTG+GKSL+L+C L W
Sbjct: 17 FPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAW 63
>sp|Q6H1L8|RTEL1_MUSSP Regulator of telomere elongation helicase 1 OS=Mus spretus
GN=Rtel1 PE=2 SV=1
Length = 1203
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAISSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>sp|Q5RJZ1|RTEL1_RAT Regulator of telomere elongation helicase 1 OS=Rattus norvegicus
GN=Rtel1 PE=2 SV=2
Length = 1274
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ESPTGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDAVSSLKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>sp|Q5RE34|RTEL1_PONAB Regulator of telomere elongation helicase 1 OS=Pongo abelii
GN=RTEL1 PE=2 SV=1
Length = 1302
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 27 FPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW-------YSDHKI 79
FPF Y Q +M + L GI ES TGTGK+L L+C L W S KI
Sbjct: 13 FPFQPYKCQQEYMTKVLECLQQKVNGILESHTGTGKTLCLLCTTLAWREHLRDGISARKI 72
Query: 80 AGLEKIEAEI 89
A E+++ E+
Sbjct: 73 A--ERVQGEL 80
>sp|Q2U587|CHL1_ASPOR ATP-dependent RNA helicase chl1 OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=chl1 PE=3 SV=1
Length = 721
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 17 PLAEVPSEFPFPFDAYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLS 65
P AE EF P+ YDIQ FM+ LY ++ K +FESPTG LS
Sbjct: 3 PQAE---EFHHPYSPYDIQLQFMRALYSCIEKGKVAVFESPTGKLAGLS 48
>sp|P18074|ERCC2_HUMAN TFIIH basal transcription factor complex helicase XPD subunit
OS=Homo sapiens GN=ERCC2 PE=1 SV=1
Length = 760
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 27 FPFD-AYDIQSNFMKNLYYTLDNSKFGIFESPTGTGKSLSLICGILKW------------ 73
FP+D Y Q ++M+ L TLD G+ E P+GTGK++SL+ I+ +
Sbjct: 12 FPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLI 71
Query: 74 YSDHKIAGLEKIEAEIKDL 92
Y + +EK+ E++ L
Sbjct: 72 YCSRTVPEIEKVIEELRKL 90
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,176,515
Number of Sequences: 539616
Number of extensions: 1767623
Number of successful extensions: 3661
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 3591
Number of HSP's gapped (non-prelim): 100
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)