RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy14275
(303 letters)
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 275 bits (706), Expect = 4e-90
Identities = 79/209 (37%), Positives = 119/209 (56%), Gaps = 7/209 (3%)
Query: 93 VADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVF 152
V ++ K E R ++ + RVD+LQLMI+ ES + + E+V+
Sbjct: 223 VTNFLRKSVKRMKESRLEDTQ--KHRVDFLQLMIDSQNSKET--ESHKALSDLELVAQSI 278
Query: 153 VLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQV 212
+ I AG+ET+SS + +++ELA + +VQ K + E+ V TY+ + +M YL+ V
Sbjct: 279 IFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKA-PPTYDTVLQMEYLDMV 337
Query: 213 ISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPD 272
++E LRL+P+ L R C +D I IPKGV+V IP+YAL D W++P +F P+
Sbjct: 338 VNETLRLFPIAMRLERVCKKDVEING--MFIPKGVVVMIPSYALHRDPKYWTEPEKFLPE 395
Query: 273 RFAPENESKIVPGSYAPFGDGPRICIGER 301
RF+ +N+ I P Y PFG GPR CIG R
Sbjct: 396 RFSKKNKDNIDPYIYTPFGSGPRNCIGMR 424
Score = 102 bits (256), Expect = 1e-24
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 1 MQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKIYKEGGGKVTYEDL 60
E+V+ + I AG+ET+SS + +++ELA + +VQ K + E+ + TY+ +
Sbjct: 270 DLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN-KAPPTYDTV 328
Query: 61 AKMTYLEQVIS 71
+M YL+ V++
Sbjct: 329 LQMEYLDMVVN 339
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 208 bits (532), Expect = 2e-64
Identities = 65/215 (30%), Positives = 98/215 (45%), Gaps = 17/215 (7%)
Query: 88 AAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIEL-YEKDLMLPESERVIRMQE 146
A + D F K I+ R+Q + EK D LQ +++ Y+ L + E
Sbjct: 207 RAHREIKDIFYKA----IQKRRQSQ---EKIDDILQTLLDATYKDGRPLTD-------DE 252
Query: 147 VVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKM 206
V + L+LAG TSS+TS + LA ++ +Q K E + V E +TY+ L +
Sbjct: 253 VAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDL 312
Query: 207 TYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDP 266
L++ I E LRL P + + R + + IP G V + Q W +
Sbjct: 313 NLLDRCIKETLRLRPPIMIMMRMARTPQTVAG--YTIPPGHQVCVSPTVNQRLKDSWVER 370
Query: 267 LEFNPDRFAPENESKIVPGSYAPFGDGPRICIGER 301
L+FNPDR+ +N + +Y PFG G CIGE
Sbjct: 371 LDFNPDRYLQDNPASGEKFAYVPFGAGRHRCIGEN 405
Score = 87.3 bits (217), Expect = 1e-19
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKIYKEGGGKVTYEDLA 61
EV + L+LAG TSS+TS + LA ++ +Q K E + + E +TY+ L
Sbjct: 251 DEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLK 310
Query: 62 KMTYLEQVI 70
+ L++ I
Sbjct: 311 DLNLLDRCI 319
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 204 bits (520), Expect = 1e-62
Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 13/215 (6%)
Query: 88 AAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEV 147
AR + + + R + D L ++I + + E+
Sbjct: 196 EARNGLVALVADI----MNGRIANPPTDKSDRDMLDVLIAVKAET-----GTPRFSADEI 246
Query: 148 VSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMT 207
++ AGH TSS T++ L EL +++ E+ ++Y G V++ L ++
Sbjct: 247 TGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYG-DGRSVSFHALRQIP 305
Query: 208 YLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPL 267
LE V+ E LRL+P + L R ++ + H I +G LV + DP
Sbjct: 306 QLENVLKETLRLHPPLIILMRVAKGEFEVQG--HRIHEGDLVAASPAISNRIPEDFPDPH 363
Query: 268 EFNPDRFA-PENESKIVPGSYAPFGDGPRICIGER 301
+F P R+ P E + ++ PFG G C+G
Sbjct: 364 DFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAA 398
Score = 82.3 bits (204), Expect = 9e-18
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKIYKEGGGKVTYEDLA 61
E+ ++ AGH TSS T++ L EL +++ E+ ++Y G V++ L
Sbjct: 244 DEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYG-DGRSVSFHALR 302
Query: 62 KMTYLEQVI 70
++ LE V+
Sbjct: 303 QIPQLENVL 311
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 202 bits (517), Expect = 3e-62
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 95 DYFTKLTTTSIEMRKQEKAQAEK-RVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFV 153
+ ++ ++ R++ + E+ D L +++ E + + V+
Sbjct: 200 RFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQ----DDEGLL-DNFVT---- 250
Query: 154 LILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVI 213
+AGHETS++ + EL+ E+ + + EV +V + +EDL ++ YL QV+
Sbjct: 251 FFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIG-SKRYLDFEDLGRLQYLSQVL 309
Query: 214 SEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDR 273
E+LRLYP FR ++ I +P + TY + + DPL FNPDR
Sbjct: 310 KESLRLYPPAWGTFRLLEEETLIDG--VRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDR 367
Query: 274 FAPENESKIVPGSYAPFGDGPRICIGER 301
F P +Y PF G R CIG++
Sbjct: 368 FGPGA--PKPRFTYFPFSLGHRSCIGQQ 393
Score = 75.0 bits (185), Expect = 2e-15
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKIYKEGGGKVTYEDLA 61
+ ++ +AGHETS++ + EL+ E+ + + EV ++ + +EDL
Sbjct: 242 EGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIG-SKRYLDFEDLG 300
Query: 62 KMTYLEQVI 70
++ YL QV+
Sbjct: 301 RLQYLSQVL 309
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 199 bits (507), Expect = 1e-60
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 87 EAAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIEL-YEKDLMLPESERVIRMQ 145
A + ++ I R+ A +K D L ++E + + E E I Q
Sbjct: 217 NDALADLHLLVDEI----IAERR---ASGQKPDDLLTALLEAKDDNGDPIGEQE--IHDQ 267
Query: 146 EVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAK 205
V ++ G ET +ST +L LA + E D+ R EV+ V GG V +ED+ K
Sbjct: 268 -----VVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVT--GGRPVAFEDVRK 320
Query: 206 MTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSD 265
+ + VI EA+RL P V L R + + + IP G + YA+Q D + D
Sbjct: 321 LRHTGNVIVEAMRLRPAVWVLTRRAVAESELGG--YRIPAGADIIYSPYAIQRDPKSYDD 378
Query: 266 PLEFNPDRFAPENESKIVPGSYAPFGDGPRICIGER 301
LEF+PDR+ PE + + + PF G R C +
Sbjct: 379 NLEFDPDRWLPERAANVPKYAMKPFSAGKRKCPSDH 414
Score = 80.4 bits (199), Expect = 4e-17
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKIYKEGGGKVTYEDLA 61
QE+ V ++ G ET +ST +L LA + E D+ R EV+ + GG V +ED+
Sbjct: 262 QEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVT--GGRPVAFEDVR 319
Query: 62 KMTYLEQVI 70
K+ + VI
Sbjct: 320 KLRHTGNVI 328
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 198 bits (506), Expect = 2e-60
Identities = 43/221 (19%), Positives = 84/221 (38%), Gaps = 22/221 (9%)
Query: 96 YFTKLTTTSIEMR-KQEKAQAEKRVDYLQLMIELYEKDLM-LPESERVIRMQEVVSGVFV 153
+ + + + K+ K DY Q + +M E V + + V + +F
Sbjct: 217 FLQEPLLHTFRLPAFLIKSTYNKLYDYFQSVA----TPVMEQAEKLGVPKDEAVHNILFA 272
Query: 154 LILAGHETSSSTSTNVLHELA-YNQEVQDKARREVQKVYKE-GGGKVTYEDLAKMTYLEQ 211
+ N L + + + + E++ K G G VT E + +M +
Sbjct: 273 VCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKS 332
Query: 212 VISEALRLYPLVNCLFRECTQDYAIP--DSPHVIPKGVLVHIPTYALQTDAALWSDPLEF 269
V+ E+LR+ P V + + ++ I D+ + KG ++ D ++ P E+
Sbjct: 333 VVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEY 392
Query: 270 NPDRFAPENESKIVPGSYAPFGDGP---------RICIGER 301
PDRF + E+ Y + +GP + C G+
Sbjct: 393 VPDRFVGDGEA---LLKYVWWSNGPETESPTVENKQCAGKD 430
Score = 79.5 bits (196), Expect = 6e-17
Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 1 MQEVVSGVFVLILAGHETSSSTSTNVLHELA-YNQEVQDKARREVQKIYKE-GGGKVTYE 58
+ V + +F + N L + + + + E++ K G G VT E
Sbjct: 263 DEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLE 322
Query: 59 DLAKMTYLEQVIS 71
+ +M + V+
Sbjct: 323 AIEQMPLTKSVVY 335
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 196 bits (499), Expect = 2e-59
Identities = 41/226 (18%), Positives = 79/226 (34%), Gaps = 19/226 (8%)
Query: 92 PVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYE--KDLMLPESERVIRMQEVVS 149
P+ + A + DY +L E ++++ + I +E
Sbjct: 226 PLLSIGLPRVIEEPLIHTFSLPPALVKSDYQRLYEFFLESAGEILVEADKLGISREEATH 285
Query: 150 GVFVLILAGHETSSSTSTNVLHELAY-----NQEVQDKARREVQKVYKEGGGKVTYEDLA 204
L+ A + + + +V ++ E++ V K GG++T +
Sbjct: 286 ---NLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIE 342
Query: 205 KMTYLEQVISEALRLYPLVNCLFRECTQDYAIP--DSPHVIPKGVLVHIPTYALQTDAAL 262
KM + V+ E LR P V + +D I D+ + G +++ D +
Sbjct: 343 KMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKI 402
Query: 263 WSDPLEFNPDRFAPENESKIVPGSYAPFG-------DGPRICIGER 301
+ EF P+RF E K++ G G + C G+
Sbjct: 403 FDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKD 448
Score = 75.7 bits (186), Expect = 1e-15
Identities = 11/66 (16%), Positives = 26/66 (39%), Gaps = 5/66 (7%)
Query: 11 LILAGHETSSSTSTNVLHELAY-----NQEVQDKARREVQKIYKEGGGKVTYEDLAKMTY 65
L+ A + + + +V ++ E++ + K GG++T + KM
Sbjct: 287 LLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMEL 346
Query: 66 LEQVIS 71
+ V+
Sbjct: 347 TKSVVY 352
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 192 bits (490), Expect = 4e-58
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 105 IEMRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSS 164
I RK A E+ D L M+ KD PE+ + + + + ++AGHET+S
Sbjct: 220 IADRK---ASGEQSDDLLTHMLN--GKD---PETGEPLDDENIRYQIITFLIAGHETTSG 271
Query: 165 TSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVN 224
+ L+ L N V KA E +V +Y+ + ++ Y+ V++EALRL+P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL--VDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 225 CLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALW-SDPLEFNPDRFAPENESKIV 283
+D + + + KG + + L D +W D EF P+RF EN S I
Sbjct: 330 AFSLYAKEDTVLGG-EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIP 386
Query: 284 PGSYAPFGDGPRICIGER 301
++ PFG+G R CIG++
Sbjct: 387 QHAFKPFGNGQRACIGQQ 404
Score = 76.5 bits (189), Expect = 8e-16
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 11 LILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKIYKEGGGKVTYEDLAKMTYLEQVI 70
++AGHET+S + L+ L N V KA E ++ +Y+ + ++ Y+ V+
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL--VDPVPSYKQVKQLKYVGMVL 318
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 192 bits (490), Expect = 5e-58
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 95 DYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVL 154
D K I+ R Q +Q + D+L + + + L S++ + V L
Sbjct: 244 DTIFKSVKPCIDNRLQRYSQ-QPGADFLCDIYQ--QDHL----SKKELYAA-----VTEL 291
Query: 155 ILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVIS 214
LA ET++++ +L+ L+ N + Q + +EVQ V + EDL M YL+ +
Sbjct: 292 QLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQ-TPRAEDLRNMPYLKACLK 350
Query: 215 EALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRF 274
E++RL P V R + + + +PKG ++ + T L + + D +F P+R+
Sbjct: 351 ESMRLTPSVPFTTRTLDKPTVL--GEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERW 408
Query: 275 APENESKIVPGSYAPFGDGPRICIGER 301
+ + KI P ++ PFG G R+CIG R
Sbjct: 409 LQKEK-KINPFAHLPFGIGKRMCIGRR 434
Score = 74.7 bits (184), Expect = 3e-15
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 1 MQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKIYKEGGGKVTYEDL 60
+E+ + V L LA ET++++ +L+ L+ N + Q + +EVQ + + EDL
Sbjct: 281 KKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPD-NQTPRAEDL 339
Query: 61 AKMTYLEQVI 70
M YL+ +
Sbjct: 340 RNMPYLKACL 349
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 192 bits (490), Expect = 7e-58
Identities = 41/204 (20%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 101 TTTSIEMRKQEKAQAE---KRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILA 157
I +++ + E + +D+ +I ++ + + + Q ++ +++A
Sbjct: 255 IEVLIAEKRRRISTEEKLEECMDFATELILAEKRGDL---TRENVN-QCILE----MLIA 306
Query: 158 GHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEAL 217
+T S + +L +A + V++ +E+Q V G + +D+ K+ +E I E++
Sbjct: 307 APDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVI--GERDIKIDDIQKLKVMENFIYESM 364
Query: 218 RLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPE 277
R P+V+ + R+ +D I + + KG + + + + P EF + FA
Sbjct: 365 RYQPVVDLVMRKALEDDVIDG--YPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFAKN 421
Query: 278 NESKIVPGSYAPFGDGPRICIGER 301
+ PFG GPR C G+
Sbjct: 422 VP----YRYFQPFGFGPRGCAGKY 441
Score = 79.3 bits (196), Expect = 9e-17
Identities = 14/69 (20%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKIYKEGGGKVTYEDLA 61
+ V + +++A +T S + +L +A + V++ +E+Q + G + +D+
Sbjct: 294 ENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVI--GERDIKIDDIQ 351
Query: 62 KMTYLEQVI 70
K+ +E I
Sbjct: 352 KLKVMENFI 360
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 190 bits (484), Expect = 1e-57
Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 18/212 (8%)
Query: 89 AREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEVV 148
AR + K+ I+ R+ Q D L +++ +D ++ + + + E+
Sbjct: 199 ARALLLAELEKI----IKARQ---QQPPSEEDALGILLA--ARD----DNNQPLSLPELK 245
Query: 149 SGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTY 208
+ +L+ AGHET +S ++ L + +++++ R+E K+ + ++T E L KM Y
Sbjct: 246 DQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKL--QLSQELTAETLKKMPY 303
Query: 209 LEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLE 268
L+QV+ E LRL P V FRE QD PKG LV D L+ DP +
Sbjct: 304 LDQVLQEVLRLIPPVGGGFRELIQDCQFQG--FHFPKGWLVSYQISQTHADPDLYPDPEK 361
Query: 269 FNPDRFAPEN-ESKIVPGSYAPFGDGPRICIG 299
F+P+RF P+ + P ++ PFG G R C+G
Sbjct: 362 FDPERFTPDGSATHNPPFAHVPFGGGLRECLG 393
Score = 78.5 bits (194), Expect = 2e-16
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 1 MQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKIYKEGGGKVTYEDL 60
+ E+ + +L+ AGHET +S ++ L + +++++ R+E K+ + ++T E L
Sbjct: 241 LPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKL--QLSQELTAETL 298
Query: 61 AKMTYLEQVIS 71
KM YL+QV+
Sbjct: 299 KKMPYLDQVLQ 309
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 189 bits (483), Expect = 6e-57
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 13/208 (6%)
Query: 95 DYFTKLTTTSIEMRKQE-KAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFV 153
D + E + + DY ++ L M +++ + V
Sbjct: 231 DVIFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGDSKM--------SFEDIKANVTE 282
Query: 154 LILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVI 213
++ G +T+S T L+E+A N +VQD R EV + G L + L+ I
Sbjct: 283 MLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQG-DMATMLQLVPLLKASI 341
Query: 214 SEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDR 273
E LRL+P+ L R D + ++IP LV + YAL + + DP F+P R
Sbjct: 342 KETLRLHPISVTLQRYLVNDLVL--RDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTR 399
Query: 274 FAPENESKIVPGSYAPFGDGPRICIGER 301
+ +++ I FG G R C+G R
Sbjct: 400 WLSKDK-NITYFRNLGFGWGVRQCLGRR 426
Score = 74.3 bits (183), Expect = 4e-15
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 1 MQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKIYKEGGGKVTYEDL 60
+++ + V ++ G +T+S T L+E+A N +VQD R EV + G L
Sbjct: 273 FEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQG-DMATML 331
Query: 61 AKMTYLEQVI 70
+ L+ I
Sbjct: 332 QLVPLLKASI 341
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 181 bits (460), Expect = 2e-53
Identities = 41/214 (19%), Positives = 78/214 (36%), Gaps = 28/214 (13%)
Query: 107 MRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSSTS 166
+ A+ R +L+ + E+ + E + + + A +
Sbjct: 231 LSPARLARRAHRSKWLESYLLHLEEMGVSEE--------MQARALVLQLWATQGNMGPAA 282
Query: 167 TNVLHELAYNQEVQDKARREVQKVYKEGGGK------VTYEDLAKMTYLEQVISEALRLY 220
+L L N E R E++ + + + + L L+ V+SE+LRL
Sbjct: 283 FWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLT 342
Query: 221 PLVNCLFRECTQDYAIPDS---PHVIPKG-VLVHIPTYALQTDAALWSDPLEFNPDRFAP 276
+ RE D A+P + + +G L+ P + Q D +++DP F +RF
Sbjct: 343 AAPF-ITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLN 401
Query: 277 EN---------ESKIVPGSYAPFGDGPRICIGER 301
+ + K + P+G G C+G
Sbjct: 402 PDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRS 435
Score = 76.4 bits (188), Expect = 8e-16
Identities = 11/75 (14%), Positives = 24/75 (32%), Gaps = 6/75 (8%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKIYKEGGGK------V 55
+ + + + A + +L L N E R E++ I + +
Sbjct: 261 EMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTL 320
Query: 56 TYEDLAKMTYLEQVI 70
+ L L+ V+
Sbjct: 321 PQKVLDSTPVLDSVL 335
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 179 bits (455), Expect = 4e-53
Identities = 45/218 (20%), Positives = 89/218 (40%), Gaps = 26/218 (11%)
Query: 88 AAREPVADYFTKLTTTSIEMRKQEKAQAE-KRVDYLQLMIEL-YEKDLMLPESERVIRMQ 145
AR + +++ I RK+E+ + D L ++ Y + E +
Sbjct: 204 EARTELQKILSEI----IIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHE--VC-G 256
Query: 146 EVVSGVFVLILAGHETSSSTSTNVLHELAYNQEV--QDKARREVQKVYKEGGGKVTYEDL 203
+V+ + AG TSS T+T + L + V + R+E+++ +
Sbjct: 257 MIVA----AMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF---PAQLNYNNVM 309
Query: 204 AKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALW 263
+M + E+ E++R P + L R+ D + +V+PKG ++ D +
Sbjct: 310 DEMPFAERCARESIRRDPPLLMLMRKVMADVKVGS--YVVPKGDIIACSPLLSHHDEEAF 367
Query: 264 SDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIGER 301
+P ++P+R G++ FG G CIG++
Sbjct: 368 PEPRRWDPERDEKV------EGAFIGFGAGVHKCIGQK 399
Score = 70.0 bits (172), Expect = 1e-13
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEV--QDKARREVQKIYKEGGGKVTYED 59
EV + + AG TSS T+T + L + V + R+E+++
Sbjct: 252 HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF---PAQLNYNNV 308
Query: 60 LAKMTYLEQVI 70
+ +M + E+
Sbjct: 309 MDEMPFAERCA 319
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 177 bits (450), Expect = 5e-52
Identities = 46/223 (20%), Positives = 83/223 (37%), Gaps = 31/223 (13%)
Query: 99 KLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAG 158
KL + Q++ E + + L + L + + E V++ A
Sbjct: 220 KLAESLRHENLQKR---ESISELISLRMFLNDTLSTFDD-------LEKAKTHLVVLWAS 269
Query: 159 HETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGK---------VTYEDLAKMTYL 209
+ + L ++ N E A EV++ + G K ++ +L + L
Sbjct: 270 QANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVL 329
Query: 210 EQVISEALRLYPLVNCLFRECTQDYAIP--DSPHVIPKGVLVHIPTYALQTDAALWSDPL 267
+ +I E+LRL + R +D+ + D + I K ++ + + D ++ DPL
Sbjct: 330 DSIIKESLRLSS-ASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPL 388
Query: 268 EFNPDRFAPENES---------KIVPGSYAPFGDGPRICIGER 301
F DR+ EN + Y PFG G IC G
Sbjct: 389 TFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRL 431
Score = 74.3 bits (183), Expect = 5e-15
Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 9/78 (11%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKIYKEGGGK------- 54
E V++ A + + L ++ N E A EV++ + G K
Sbjct: 256 LEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNP 315
Query: 55 --VTYEDLAKMTYLEQVI 70
++ +L + L+ +I
Sbjct: 316 ICLSQAELNDLPVLDSII 333
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 153 bits (389), Expect = 2e-43
Identities = 45/306 (14%), Positives = 97/306 (31%), Gaps = 52/306 (16%)
Query: 34 QEVQDKARREVQKIYKEGGGKVTYEDLAK---MTYLEQVISDKT----QGSNSDNTGSVP 86
++ + + ++ + + + K ++ G+ ++N+ ++
Sbjct: 123 TQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYLTVFGAENNNSAALT 182
Query: 87 EAARE--PVADYFTKL---TTTSIEMRKQEKAQA--------------EKRVDYLQLMIE 127
+ E KL T E + A+ + +L ++
Sbjct: 183 QIYEEFRRFDKLLPKLARTTVNKEEKQIASAAREKLWKWLTPSGLDRKPREQSWLGSYVK 242
Query: 128 LYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREV 187
+ + + ++E R + + + + + V+ L + E R E+
Sbjct: 243 QLQDEGI--DAEMQRRA------MLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEI 294
Query: 188 QKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSP---HVIP 244
Q G E + V+ E LRL + R+ TQD I S + +
Sbjct: 295 QG----GKHLRLEERQKNTPVFDSVLWETLRLTAAAL-ITRDVTQDKKICLSNGQEYHLR 349
Query: 245 KGVLVHI-PTYALQTDAALWSDPLEFNPDRFAPENES---------KIVPGSYAPFGDGP 294
+G + + P + Q D + P F DRF + + V P+G
Sbjct: 350 RGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTED 409
Query: 295 RICIGE 300
+C G
Sbjct: 410 NLCPGR 415
Score = 61.9 bits (151), Expect = 5e-11
Identities = 9/70 (12%), Positives = 20/70 (28%), Gaps = 4/70 (5%)
Query: 1 MQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKIYKEGGGKVTYEDL 60
+ + + + + + V+ L + E R E+Q G E
Sbjct: 251 AEMQRRAMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQG----GKHLRLEERQ 306
Query: 61 AKMTYLEQVI 70
+ V+
Sbjct: 307 KNTPVFDSVL 316
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 150 bits (381), Expect = 6e-43
Identities = 45/222 (20%), Positives = 76/222 (34%), Gaps = 33/222 (14%)
Query: 84 SVPEAAREPVADYFTKLTTTSIEMRKQ----EKAQAEKRVDYLQLMIELYEKDLMLPESE 139
+ + E ++ + +A+ K L E L++
Sbjct: 148 PLSPSLAEHALKALDRIMAQTRSPLALLDLAAEARFRKDRGALYREAE----ALIVHPPL 203
Query: 140 RVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVT 199
+ + +S L++AGHET +S T L++ + Q + +
Sbjct: 204 SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA--------- 254
Query: 200 YEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTD 259
EALRLYP L R + + + +P G + + Y Q
Sbjct: 255 ----------LAAFQEALRLYPPAWILTRRLERPLLLGE--DRLPPGTTLVLSPYVTQRL 302
Query: 260 AALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIGER 301
+ D F P+RF E + G Y PFG G R+C+G
Sbjct: 303 --HFPDGEAFRPERFLEERGTP--SGRYFPFGLGQRLCLGRD 340
Score = 53.0 bits (128), Expect = 4e-08
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 1 MQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQ 45
+ +S L++AGHET +S T L++ + Q + +
Sbjct: 208 RERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEE 252
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 145 bits (369), Expect = 6e-41
Identities = 40/220 (18%), Positives = 64/220 (29%), Gaps = 43/220 (19%)
Query: 88 AAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEKD--LMLPESERVIRMQ 145
AR ++ + IE + + L M ++D + R+ ++
Sbjct: 185 RARPRAEEWIEVM----IEDARAGLLKTT-SGTALHEMAFHTQEDGSQL---DSRMAAIE 236
Query: 146 EVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAK 205
+ +L S L + + ++ R
Sbjct: 237 ------LINVLRPIVAISYFLVFSALALHEHPKYKEWLRSG------------------N 272
Query: 206 MTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSD 265
E + E R YP L +D+ + KG V + Y D LW
Sbjct: 273 SREREMFVQEVRRYYPFGPFLGALVKKDFVWNN--CEFKKGTSVLLDLYGTNHDPRLWDH 330
Query: 266 PLEFNPDRFAPENESKIVPGSYAPFGDGP----RICIGER 301
P EF P+RFA E+ P G G C GE
Sbjct: 331 PDEFRPERFAEREEN---LFDMIPQGGGHAEKGHRCPGEG 367
Score = 49.3 bits (118), Expect = 7e-07
Identities = 5/62 (8%), Positives = 12/62 (19%), Gaps = 18/62 (29%)
Query: 10 VLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKIYKEGGGKVTYEDLAKMTYLEQV 69
+ +L S L + + ++ R E
Sbjct: 238 INVLRPIVAISYFLVFSALALHEHPKYKEWLRSG------------------NSREREMF 279
Query: 70 IS 71
+
Sbjct: 280 VQ 281
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 139 bits (351), Expect = 2e-38
Identities = 43/217 (19%), Positives = 69/217 (31%), Gaps = 40/217 (18%)
Query: 88 AAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEV 147
AR V + ++ IE + + + D +L + +
Sbjct: 184 LARRRVDAWAKRI----IEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVEL--- 236
Query: 148 VSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMT 207
V +L + T V H L ++ + +
Sbjct: 237 -----VNVLRPTVAIAVYITFVAHALQTCSGIRAA-------------------LVQQPD 272
Query: 208 YLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPL 267
Y E + E R YP + +QD+ P+G V + Y DAA W+DP
Sbjct: 273 YAELFVQEVRRFYPFFPAVVARASQDFEWEG--MAFPEGRQVVLDLYGSNHDAATWADPQ 330
Query: 268 EFNPDRFAPENESKIVPGSYAPFGDGP----RICIGE 300
EF P+RF +E ++ P G G C GE
Sbjct: 331 EFRPERFRAWDED---SFNFIPQGGGDHYLGHRCPGE 364
Score = 41.6 bits (98), Expect = 2e-04
Identities = 9/69 (13%), Positives = 17/69 (24%), Gaps = 19/69 (27%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKIYKEGGGKVTYEDLA 61
V + V +L + T V H L ++ +
Sbjct: 229 PHVAAVELVNVLRPTVAIAVYITFVAHALQTCSGIRAA-------------------LVQ 269
Query: 62 KMTYLEQVI 70
+ Y E +
Sbjct: 270 QPDYAELFV 278
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 96.5 bits (241), Expect = 1e-22
Identities = 37/185 (20%), Positives = 75/185 (40%), Gaps = 12/185 (6%)
Query: 121 YLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSST-STNVLHELAYNQEV 179
++ + D + + ++ V + + + A +T S+ +L +V
Sbjct: 256 FILSAEKKAAGDSHGGGAR--LDLENVPATITDIFGASQDTLSTALQWLLLL-FTRYPDV 312
Query: 180 QDKARREVQKVYKEGGGK-VTYEDLAKMTYLEQVISEALRLYPLV-NCLFRECTQDYAIP 237
Q + + E+ +V G + D + Y+ + EA+R V + T + ++
Sbjct: 313 QTRVQAELDQVV--GRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVL 370
Query: 238 DSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPENES--KIVPGSYAPFGDGPR 295
+ IPK +V + +++ D W +P F+P RF ++ K + F G R
Sbjct: 371 G--YHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKR 428
Query: 296 ICIGE 300
CIGE
Sbjct: 429 RCIGE 433
Score = 33.0 bits (76), Expect = 0.13
Identities = 12/73 (16%), Positives = 29/73 (39%), Gaps = 7/73 (9%)
Query: 1 MQEVVSGVFVLILAGHETSSST-STNVLHELAYNQEVQDKARREV-QKIYKEGGGK-VTY 57
++ V + + + A +T S+ +L +VQ + + E+ Q + G +
Sbjct: 277 LENVPATITDIFGASQDTLSTALQWLLLL-FTRYPDVQTRVQAELDQVV---GRDRLPCM 332
Query: 58 EDLAKMTYLEQVI 70
D + Y+ +
Sbjct: 333 GDQPNLPYVLAFL 345
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 95.3 bits (238), Expect = 3e-22
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 6/159 (3%)
Query: 144 MQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGK-VTYED 202
+ + V L AG T+S+T L + + +VQ + ++E+ V G + D
Sbjct: 270 DENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVI--GQVRRPEMGD 327
Query: 203 LAKMTYLEQVISEALRLYPLV-NCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAA 261
A M Y VI E R +V + ++D + IPKG + ++ D A
Sbjct: 328 QAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQG--FRIPKGTTLITNLSSVLKDEA 385
Query: 262 LWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIGE 300
+W P F+P+ F + P ++ PF G R C+GE
Sbjct: 386 VWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGE 424
Score = 33.3 bits (77), Expect = 0.080
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 1 MQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREV-QKIYKEGGGK-VTYE 58
+ + V L AG T+S+T L + + +VQ + ++E+ I G +
Sbjct: 270 DENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVI---GQVRRPEMG 326
Query: 59 DLAKMTYLEQVI 70
D A M Y VI
Sbjct: 327 DQAHMPYTTAVI 338
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 95.0 bits (237), Expect = 5e-22
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 154 LILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKV--YKEGGGKVTYEDLAKMTYLEQ 211
L + G ET++ST + + L ++ E+Q + + E+ + +VTY+D A++ L
Sbjct: 287 LFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNA 346
Query: 212 VISEALRLYPLV-NCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFN 270
I+E LRL P+V L T+ +I + IP+G++V D +W P EF
Sbjct: 347 TIAEVLRLRPVVPLALPHRTTRPSSIFG--YDIPEGMVVIPNLQGAHLDETVWEQPHEFR 404
Query: 271 PDRFAPENESKIVPGSYAPFGDGPRICIGE 300
PDRF + S FG G R+C+GE
Sbjct: 405 PDRFLEPGAN----PSALAFGCGARVCLGE 430
Score = 34.9 bits (81), Expect = 0.027
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 11 LILAGHETSSSTSTNVLHELAYNQEVQDKARREV-QKIYKEGGGK-VTYEDLAKMTYLEQ 68
L + G ET++ST + + L ++ E+Q + + E+ +++ VTY+D A++ L
Sbjct: 287 LFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNA 346
Query: 69 VI 70
I
Sbjct: 347 TI 348
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 94.2 bits (235), Expect = 7e-22
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 154 LILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGK-VTYEDLAKMTYLEQV 212
LI+AG ET+++ + +A +Q + ++E+ + G +++D KM Y E V
Sbjct: 281 LIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIM--GPNGKPSWDDKCKMPYTEAV 338
Query: 213 ISEALRLYPLV-NCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNP 271
+ E LR +V +F ++D + + IPKG V Y++ D W DP F+P
Sbjct: 339 LHEVLRFCNIVPLGIFHATSEDAVVRG--YSIPKGTTVITNLYSVHFDEKYWRDPEVFHP 396
Query: 272 DRFAPENESKIVPGSYAPFGDGPRICIGE 300
+RF + + PF G R C+GE
Sbjct: 397 ERFLDSSGYFAKKEALVPFSLGRRHCLGE 425
Score = 33.3 bits (77), Expect = 0.10
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 11 LILAGHETSSSTSTNVLHELAYNQEVQDKARREV-QKIYKEGGGK-VTYEDLAKMTYLEQ 68
LI+AG ET+++ + +A +Q + ++E+ + G +++D KM Y E
Sbjct: 281 LIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIM---GPNGKPSWDDKCKMPYTEA 337
Query: 69 VI 70
V+
Sbjct: 338 VL 339
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 94.1 bits (235), Expect = 9e-22
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 10/185 (5%)
Query: 121 YLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSST-STNVLHELAYNQEV 179
+Q + + + ++ +++ + + AG ET++S + L +N +V
Sbjct: 248 LMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAF-LLHNPQV 306
Query: 180 QDKARREVQKVYKEGGGK-VTYEDLAKMTYLEQVISEALRLYPLV-NCLFRECTQDYAIP 237
+ K E+ + G + T D ++ LE I E LRL P+ + + D +I
Sbjct: 307 KKKLYEEIDQNV--GFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIG 364
Query: 238 DSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPEN--ESKIVPGSYAPFGDGPR 295
+ + KG V I +AL + W P +F P+RF + SY PFG GPR
Sbjct: 365 E--FAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPR 422
Query: 296 ICIGE 300
CIGE
Sbjct: 423 SCIGE 427
Score = 32.5 bits (75), Expect = 0.15
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 11 LILAGHETSSST-STNVLHELAYNQEVQDKARREV-QKIYKEGGGK-VTYEDLAKMTYLE 67
+ AG ET++S + L +N +V+ K E+ Q + G + T D ++ LE
Sbjct: 281 IFGAGVETTTSVVKWTLAF-LLHNPQVKKKLYEEIDQNV---GFSRTPTISDRNRLLLLE 336
Query: 68 QVI 70
I
Sbjct: 337 ATI 339
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 92.2 bits (230), Expect = 3e-21
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 154 LILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGK-VTYEDLAKMTYLEQV 212
+ AG +T ++ + L L E+Q K ++E+ V G + D ++ YLE
Sbjct: 290 IFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVI--GRERRPRLSDRPQLPYLEAF 347
Query: 213 ISEALRLYPLV-NCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNP 271
I E R + + T+D + IPK V + + + D LW DP EF P
Sbjct: 348 ILETFRHSSFLPFTIPHSTTRDTTLNG--FYIPKKCCVFVNQWQVNHDPELWEDPSEFRP 405
Query: 272 DRFAPEN---ESKIVPGSYAPFGDGPRICIGE 300
+RF + +K + FG G R CIGE
Sbjct: 406 ERFLTADGTAINKPLSEKMMLFGMGKRRCIGE 437
Score = 32.9 bits (76), Expect = 0.13
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 11 LILAGHETSSSTSTNVLHELAYNQEVQDKARREV-QKIYKEGGGK-VTYEDLAKMTYLEQ 68
+ AG +T ++ + L L E+Q K ++E+ I G + D ++ YLE
Sbjct: 290 IFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVI---GRERRPRLSDRPQLPYLEA 346
Query: 69 VI 70
I
Sbjct: 347 FI 348
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 91.5 bits (228), Expect = 6e-21
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 144 MQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGK-VTYED 202
++ + + L AG ET+S+T L L + EV K + E+++V G + +D
Sbjct: 267 IESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVI--GRNRSPCMQD 324
Query: 203 LAKMTYLEQVISEALRLYPLV-NCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAA 261
+ M Y + V+ E R L+ L T D + ++IPKG + I ++ D
Sbjct: 325 RSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRN--YLIPKGTTILISLTSVLHDNK 382
Query: 262 LWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIGE 300
+ +P F+P F E + + PF G RIC+GE
Sbjct: 383 EFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGE 421
Score = 32.9 bits (76), Expect = 0.13
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 1 MQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREV-QKIYKEGGGK-VTYE 58
++ + + L AG ET+S+T L L + EV K + E+ + I G + +
Sbjct: 267 IESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVI---GRNRSPCMQ 323
Query: 59 DLAKMTYLEQVI 70
D + M Y + V+
Sbjct: 324 DRSHMPYTDAVV 335
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 89.2 bits (222), Expect = 3e-20
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Query: 144 MQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGK-VTYED 202
Q ++ V L AG ET+S+T + V ++ ++E+++V G + +D
Sbjct: 266 HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI--GSHRPPALDD 323
Query: 203 LAKMTYLEQVISEALRLYPLV-NCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAA 261
AKM Y + VI E RL L+ + T+D +VIPK V + D
Sbjct: 324 RAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRG--YVIPKNTEVFPVLSSALHDPR 381
Query: 262 LWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIGE 300
+ P FNP F N + + PF G RIC+GE
Sbjct: 382 YFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGE 420
Score = 33.3 bits (77), Expect = 0.078
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 1 MQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREV-QKIYKEGGGK-VTYE 58
Q ++ V L AG ET+S+T + V ++ ++E+ Q I G + +
Sbjct: 266 HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI---GSHRPPALD 322
Query: 59 DLAKMTYLEQVI 70
D AKM Y + VI
Sbjct: 323 DRAKMPYTDAVI 334
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 89.1 bits (222), Expect = 3e-20
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 144 MQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGK-VTYED 202
M + V L AG ET+S+T L L E+++K E+ +V G + +D
Sbjct: 265 MDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVI--GPSRIPAIKD 322
Query: 203 LAKMTYLEQVISEALRLYPLV-NCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAA 261
+M Y++ V+ E R LV + L E T+D ++IPKG +V ++ D
Sbjct: 323 RQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRG--YLIPKGTVVVPTLDSVLYDNQ 380
Query: 262 LWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIGE 300
+ DP +F P+ F EN + PF G R+C GE
Sbjct: 381 EFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAGE 419
Score = 32.9 bits (76), Expect = 0.11
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 1 MQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREV-QKIYKEGGGK-VTYE 58
M + V L AG ET+S+T L L E+++K E+ + I G + +
Sbjct: 265 MDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVI---GPSRIPAIK 321
Query: 59 DLAKMTYLEQVI 70
D +M Y++ V+
Sbjct: 322 DRQEMPYMDAVV 333
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 88.0 bits (219), Expect = 9e-20
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 154 LILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGK-VTYEDLAKMTYLEQV 212
L + G ET S+T L + EV+ K E+ +V G + +ED AKM Y+E V
Sbjct: 276 LFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVI--GKNRQPKFEDRAKMPYMEAV 333
Query: 213 ISEALRLYPLV-NCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNP 271
I E R ++ L R +D D +PKG V+ ++ D + +S+P +FNP
Sbjct: 334 IHEIQRFGDVIPMSLARRVKKDTKFRD--FFLPKGTEVYPMLGSVLRDPSFFSNPQDFNP 391
Query: 272 DRFAPENESKIVPGSYAPFGDGPRICIGE 300
F E ++ PF G R C GE
Sbjct: 392 QHFLNEKGQFKKSDAFVPFSIGKRNCFGE 420
Score = 31.8 bits (73), Expect = 0.29
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 13/66 (19%)
Query: 11 LILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKIYKE-----GGGK-VTYEDLAKMT 64
L + G ET S+T L + EV+ K+++E G + +ED AKM
Sbjct: 276 LFIGGTETVSTTLRYGFLLLMKHPEVEA-------KVHEEIDRVIGKNRQPKFEDRAKMP 328
Query: 65 YLEQVI 70
Y+E VI
Sbjct: 329 YMEAVI 334
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 60.0 bits (146), Expect = 2e-10
Identities = 38/243 (15%), Positives = 78/243 (32%), Gaps = 48/243 (19%)
Query: 57 YEDLAKMTYLEQVISDKTQGSNSDNTGSVPEAAREPVADYFTKLTTTSIEMRKQEKAQAE 116
ED+ ++ + ++ + + + Y + I R
Sbjct: 172 LEDIPVLSEYARQMTRPEGNTPEEMATDLEAGNNG-FYAYVDPI----IRARV-----GG 221
Query: 117 KRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYN 176
D + LM+ + + + +L+L G +T + + + LA +
Sbjct: 222 DGDDLITLMVNSEINGERIAH-------DKAQGLISLLLLGGLDTVVNFLSFFMIHLARH 274
Query: 177 QEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAI 236
E+ + R D K+ + E R +P+V+ R +D
Sbjct: 275 PELVAELR----------------SDPLKL---MRGAEEMFRRFPVVS-EARMVAKDQEY 314
Query: 237 PDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRI 296
+ +G ++ +PT D A +P + + R S++ FG GP
Sbjct: 315 KG--VFLKRGDMILLPTALHGLDDAANPEPWKLDFSR---------RSISHSTFGGGPHR 363
Query: 297 CIG 299
C G
Sbjct: 364 CAG 366
Score = 34.2 bits (79), Expect = 0.046
Identities = 8/42 (19%), Positives = 20/42 (47%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
+ + +L+L G +T + + + LA + E+ + R +
Sbjct: 243 DKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSD 284
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 58.1 bits (141), Expect = 9e-10
Identities = 41/245 (16%), Positives = 78/245 (31%), Gaps = 54/245 (22%)
Query: 55 VTYEDLAKMTYLEQVISDKTQGSNSDNTGSVPEAAREPVADYFTKLTTTSIEMRKQEKAQ 114
+ ED+ + YL ++ D + + EA + DY + IE R+
Sbjct: 170 LPEEDIPHLKYLTDQMTR------PDGSMTFAEAKEA-LYDYLIPI----IEQRR----- 213
Query: 115 AEKRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELA 174
+ D + ++ + E +L++ G +T + + + LA
Sbjct: 214 QKPGTDAISIVANGQVNGRPITS-------DEAKRMCGLLLVGGLDTVVNFLSFSMEFLA 266
Query: 175 YNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDY 234
+ E + + + + E LR + LV R T DY
Sbjct: 267 KSPEHRQELIER--------------PER-----IPAACEELLRRFSLVA-DGRILTSDY 306
Query: 235 AIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGP 294
+ KG + +P D + P+ + R S+ FG G
Sbjct: 307 EFHG--VQLKKGDQILLPQMLSGLDERENACPMHVDFSR---------QKVSHTTFGHGS 355
Query: 295 RICIG 299
+C+G
Sbjct: 356 HLCLG 360
Score = 35.0 bits (81), Expect = 0.027
Identities = 7/42 (16%), Positives = 17/42 (40%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
E +L++ G +T + + + LA + E + +
Sbjct: 237 DEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIER 278
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 56.5 bits (137), Expect = 3e-09
Identities = 40/243 (16%), Positives = 83/243 (34%), Gaps = 48/243 (19%)
Query: 57 YEDLAKMTYLEQVISDKTQGSNSDNTGSVPEAAREPVADYFTKLTTTSIEMRKQEKAQAE 116
ED K+ L ++ + + + S+ A + +Y + I R+
Sbjct: 173 VEDATKLGLLANEMTRPSGNTPEEQGRSLEAANKG-FFEYVAPI----IAARRGGSGT-- 225
Query: 117 KRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYN 176
D + ++ + +P+ + V +L+L G +T + ++ L+ +
Sbjct: 226 ---DLITRILNVEIDGKPMPD-------DRALGLVSLLLLGGLDTVVNFLGFMMIYLSRH 275
Query: 177 QEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAI 236
E + RRE L++ + E R + +V+ R D
Sbjct: 276 PETVAEMRRE--------------PLK-----LQRGVEELFRRFAVVS-DARYVVSDMEF 315
Query: 237 PDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRI 296
++ +G L+ +PT D DP+ + R +++ F GP
Sbjct: 316 HG--TMLKEGDLILLPTALHGLDDRHHDDPMTVDLSR---------RDVTHSTFAQGPHR 364
Query: 297 CIG 299
C G
Sbjct: 365 CAG 367
Score = 33.4 bits (77), Expect = 0.069
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
+ V +L+L G +T + ++ L+ + E + RRE
Sbjct: 244 DRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRRE 285
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 56.2 bits (136), Expect = 4e-09
Identities = 44/233 (18%), Positives = 85/233 (36%), Gaps = 41/233 (17%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKR------VDYLQLMIELYEK----DLM 134
+ + E ++++ + + + + +A+A YL +I+ DL+
Sbjct: 182 LDKRDHEKISEWHSGVADFITSISQSPEARAHSLWCSEQLSQYLMPVIKERRVNPGSDLI 241
Query: 135 --LPESE---RVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQK 189
L SE + +++++ + ++LA E + T +++ L N E + +
Sbjct: 242 SILCTSEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLAD--- 298
Query: 190 VYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLV 249
L + + I+E LR P V + R+ +QD + I K +V
Sbjct: 299 -----------RSL-----VPRAIAETLRYKPPVQLIPRQLSQDTVVGG--MEIKKDTIV 340
Query: 250 HIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAP---FGDGPRICIG 299
A D + P FN R + K A FG G C+G
Sbjct: 341 FCMIGAANRDPEAFEQPDVFNIHR--EDLGIKSAFSGAARHLAFGSGIHNCVG 391
Score = 33.4 bits (77), Expect = 0.078
Identities = 7/42 (16%), Positives = 21/42 (50%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
+++++ + ++LA E + T +++ L N E + +
Sbjct: 257 KDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLAD 298
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 55.7 bits (135), Expect = 4e-09
Identities = 43/221 (19%), Positives = 63/221 (28%), Gaps = 45/221 (20%)
Query: 79 SDNTGSVPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEKDLMLPES 138
+ E ++ DY IE R A+ D ++
Sbjct: 172 RPDGSMTVEQLKQAADDYLWPF----IEKRM-----AQPGDDLFSRILSEPVGGRPWTV- 221
Query: 139 ERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKV 198
E L+ G +T ++ V LA + E Q R
Sbjct: 222 ------DEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRER------------ 263
Query: 199 TYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQT 258
DL + E +R YP V + R D I KG LV++P+
Sbjct: 264 --PDL-----IPAAADELMRRYPTVA-VSRNAVADVDADG--VTIRKGDLVYLPSVLHNL 313
Query: 259 DAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
D A + P E DR + G G C+G
Sbjct: 314 DPASFEAPEEVRFDRGLAPI-------RHTTMGVGAHRCVG 347
Score = 32.6 bits (75), Expect = 0.13
Identities = 10/42 (23%), Positives = 15/42 (35%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
E L+ G +T ++ V LA + E Q R
Sbjct: 222 DEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRER 263
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 55.7 bits (135), Expect = 5e-09
Identities = 44/230 (19%), Positives = 76/230 (33%), Gaps = 47/230 (20%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEK------DLM---- 134
VP+ R+ + T+++ + + A + L +I K D+
Sbjct: 159 VPQDRRDGFRALVDGVFDTTLDQAEAQANTARLY-EVLDQLIA--AKRATPGDDMTSLLI 215
Query: 135 --LPESERVIRM--QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKV 190
+ R+ +E+ + ++I AG+ET+ + +H L + R+
Sbjct: 216 AARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKG---- 271
Query: 191 YKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLF-RECTQDYAIPDSPHVIPKGVLV 249
E V+ E LR P V L R D A+PD I +G +
Sbjct: 272 ----------EVT-----WADVVEETLRHEPAVKHLPLRYAVTDIALPDG-RTIARGEPI 315
Query: 250 HIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
A D F+ R E+ + FG G C+G
Sbjct: 316 LASYAAANRHPDWHEDADTFDATRTVKEHLA---------FGHGVHFCLG 356
Score = 31.1 bits (71), Expect = 0.42
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
+E+ + ++I AG+ET+ + +H L
Sbjct: 230 EELRDTLLLMISAGYETTVNVIDQAVHTL 258
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 55.7 bits (135), Expect = 5e-09
Identities = 44/225 (19%), Positives = 75/225 (33%), Gaps = 40/225 (17%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEKD--------LMLP 136
V E R + +++ E +Q A + V+++ ++E + L+
Sbjct: 159 VDEKYRGEFGRWSSEILVMDPERAEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIRV 218
Query: 137 ESERVIRM--QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEG 194
+ + R+ E+ S VL+LAG E S S + L + + RR+
Sbjct: 219 QDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRD-------- 270
Query: 195 GGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTY 254
L + E LR R ++ I IP+ V +
Sbjct: 271 ------PSA-----LPNAVEEILRYIAPPETTTRFAAEEVEIGG--VAIPQYSTVLVANG 317
Query: 255 ALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
A D + DP F+ R + S FG G C+G
Sbjct: 318 AANRDPKQFPDPHRFDVTRDTRGHLS---------FGQGIHFCMG 353
Score = 30.7 bits (70), Expect = 0.63
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
E+ S VL+LAG E S S + L
Sbjct: 229 DELTSIALVLLLAGFEASVSLIGIGTYLL 257
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 55.3 bits (134), Expect = 6e-09
Identities = 47/230 (20%), Positives = 87/230 (37%), Gaps = 47/230 (20%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKR-----VDYLQLMIELYEK------DL 133
VPE RE + ++ L T R ++ + Y + +I+ ++ D+
Sbjct: 149 VPEEDREQLKEWAASLIQTIDFTRSRKALTEGNIMAVQAMAYFKELIQ--KRKRHPQQDM 206
Query: 134 M--LPESERVIRM--QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQK 189
+ L + ++ +E S +L +AGHET+ + +N + L + E K R
Sbjct: 207 ISMLLKGREKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLREN--- 263
Query: 190 VYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLV 249
DL + + E LR R ++D I I +G V
Sbjct: 264 -----------PDL-----IGTAVEECLRYESPTQMTARVASEDIDICG--VTIRQGEQV 305
Query: 250 HIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
++ A D +++++P F+ R + S FG G +C+G
Sbjct: 306 YLLLGAANRDPSIFTNPDVFDITRSPNPHLS---------FGHGHHVCLG 346
Score = 31.1 bits (71), Expect = 0.42
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
+E S +L +AGHET+ + +N + L + E K R
Sbjct: 222 EEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLREN 263
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 55.0 bits (133), Expect = 1e-08
Identities = 50/245 (20%), Positives = 76/245 (31%), Gaps = 57/245 (23%)
Query: 57 YEDLAKMTYLEQVISDKTQGSNSDNTGSVPEAAREPVADYFTKLTTTSIEMRKQEKAQAE 116
ED + L G + G P A + YF +L I R++E
Sbjct: 177 AEDEDMLIDLTNHA---FGGEDELFDGMTPRQAHTEILVYFDEL----ITARRKEPGD-- 227
Query: 117 KRVDYLQLMIELYEKDL--MLPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELA 174
DL L + + + +V+ +++ G+ET+ T +H LA
Sbjct: 228 ---------------DLVSTLVTDDD-LTIDDVLLNCDNVLIGGNETTRHAITGAVHALA 271
Query: 175 YNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDY 234
+ R ++ V+ E LR + R T D
Sbjct: 272 TVPGLLTALRDG--------------SAD-----VDTVVEEVLRWTSPAMHVLRVTTADV 312
Query: 235 AIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGP 294
I +P G V A D A + DP F P R P + FG G
Sbjct: 313 TING--RDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR---------KPNRHITFGHGM 361
Query: 295 RICIG 299
C+G
Sbjct: 362 HHCLG 366
Score = 33.4 bits (77), Expect = 0.085
Identities = 9/42 (21%), Positives = 18/42 (42%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
+V+ +++ G+ET+ T +H LA + R
Sbjct: 242 DDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDG 283
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 54.5 bits (132), Expect = 1e-08
Identities = 44/226 (19%), Positives = 74/226 (32%), Gaps = 45/226 (19%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKR--VDYLQLMIELYEK----DLM---- 134
VP D+F + + + +A A YL ++ + L+
Sbjct: 164 VPYGDH----DFFEECSRNFVGAATSAEADAAFGELYTYLHGLVGRKQAEPEDGLLDELI 219
Query: 135 -LPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKE 193
E + EVV VL++AGHET+ + L + E D R+
Sbjct: 220 ARQLEEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRD------- 272
Query: 194 GGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPT 253
+ V+ E LR + + + R +D + I G V +
Sbjct: 273 -------PGA-----VSGVVEELLRFTSVSDHIVRMAKEDIEVGG--ATIKAGDAVLVSI 318
Query: 254 YALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
+ DA + +P F+ R A + FG G C+G
Sbjct: 319 TLMNRDAKAYENPDIFDARRNARHHVG---------FGHGIHQCLG 355
Score = 30.7 bits (70), Expect = 0.55
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
EVV VL++AGHET+ + L
Sbjct: 231 DEVVMIALVLLVAGHETTVNAIALGALTL 259
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 53.8 bits (130), Expect = 2e-08
Identities = 45/244 (18%), Positives = 82/244 (33%), Gaps = 50/244 (20%)
Query: 58 EDLAKMTYLEQVISDKTQGSNSDNTGSVPEAAREPVADYFTKLTTTSIEMRKQEKAQAEK 117
E+ K+T V + G ++ E A YF L E+ +
Sbjct: 183 EERRKLTRWSDVTTAAPGGGVVESWDQRKTELLE-CAAYFQVLW--------NERVNKDP 233
Query: 118 RVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQ 177
D + ++ + R + +E + V +LI+ G++T+ ++ T + L N
Sbjct: 234 GNDLISMLAH--------SPATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNP 285
Query: 178 EVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIP 237
+ K + L +E ++ E +R + + R D +
Sbjct: 286 DQFAKLKAN--------------PAL-----VETMVPEIIRWQTPLAHMRRTAIADSELG 326
Query: 238 DSPHVIPKG--VLVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPR 295
I KG V++ + D + P EF DR P + FG G
Sbjct: 327 G--KTIRKGDKVVMWYY--SGNRDDEVIDRPEEFIIDRPRPRQ--------HLSFGFGIH 374
Query: 296 ICIG 299
C+G
Sbjct: 375 RCVG 378
Score = 32.2 bits (74), Expect = 0.21
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
+E + V +LI+ G++T+ ++ T + L N + K +
Sbjct: 253 EEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKAN 294
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 53.4 bits (129), Expect = 2e-08
Identities = 38/228 (16%), Positives = 63/228 (27%), Gaps = 41/228 (17%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKR-----VDYLQLMIELYEKD------- 132
+PE + V + + + M+E +
Sbjct: 148 LPEDDADAVMEAMFEAMLMQSAEPADGDVDRAAVAFGYLSARVAEMLEDKRVNPGDGLAD 207
Query: 133 -LMLPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVY 191
L+ I E ++ + V GH + + A EV R +
Sbjct: 208 SLLDAARAGEITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRND----- 262
Query: 192 KEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHI 251
E +I+E +R+ P R T+D I +I G +
Sbjct: 263 ---------ESA-----RAAIINEMVRMDPPQLSFLRFPTEDVEIGG--VLIEAGSPIRF 306
Query: 252 PTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
A D ++ DP F+ R + FG GP C G
Sbjct: 307 MIGAANRDPEVFDDPDVFDHTRPPAASR-------NLSFGLGPHSCAG 347
Score = 31.8 bits (73), Expect = 0.25
Identities = 8/42 (19%), Positives = 14/42 (33%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
E ++ + V GH + + A EV R +
Sbjct: 221 SEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRND 262
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 53.1 bits (128), Expect = 4e-08
Identities = 43/213 (20%), Positives = 71/213 (33%), Gaps = 46/213 (21%)
Query: 87 EAAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQE 146
A + DY L I+ R++ + D + ++ + E L E E
Sbjct: 202 MKAGMWLRDYLRAL----IDERRRTPGE-----DLMSGLVAVEESGDQLTE-------DE 245
Query: 147 VVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKM 206
+++ +L++AGHET+ + N + +
Sbjct: 246 IIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAAD--------------GSR--- 288
Query: 207 TYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDP 266
VI E +R P V + R D I H +PKG + + A D + P
Sbjct: 289 --ASAVIEETMRYDPPVQLVSRYAGDDLTIGT--HTVPKGDTMLLLLAAAHRDPTIVGAP 344
Query: 267 LEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
F+PDR + FG G C+G
Sbjct: 345 DRFDPDRAQIRHLG---------FGKGAHFCLG 368
Score = 32.6 bits (75), Expect = 0.15
Identities = 8/42 (19%), Positives = 18/42 (42%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
E+++ +L++AGHET+ + N + +
Sbjct: 244 DEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAAD 285
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 53.0 bits (128), Expect = 4e-08
Identities = 46/228 (20%), Positives = 77/228 (33%), Gaps = 43/228 (18%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKR-----VDYLQLMIELYEKD------- 132
+P A V + + T E + DY++ + ++
Sbjct: 148 LPAADWGAVGRWSRDVGRTLDRGASAEDMRRGHAAIAEFADYVERALARRRREGGEDLLA 207
Query: 133 -LMLPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVY 191
++ ++ E+VS V I GHET +S N + L + + D RR
Sbjct: 208 LMLDAHDRGLMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRR----- 262
Query: 192 KEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHI 251
DL L Q + E LR P V R+ D + + + +V +
Sbjct: 263 ---------PDL-----LAQAVEECLRYDPSVQSNTRQLDVDVELRG--RRLRRDDVVVV 306
Query: 252 PTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
A D + P +F+ +R + S FG G R C+G
Sbjct: 307 LAGAANRDPRRYDRPDDFDIERDPVPSMS---------FGAGMRYCLG 345
Score = 31.4 bits (72), Expect = 0.32
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
E+VS V I GHET +S N + L
Sbjct: 221 NEIVSTVVTFIFTGHETVASQVGNAVLSL 249
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 51.9 bits (125), Expect = 9e-08
Identities = 43/227 (18%), Positives = 75/227 (33%), Gaps = 50/227 (22%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKR--VDYLQLMIELYEK------DLM-- 134
VP R T L ++ +E A + Y+ ++E K D++
Sbjct: 167 VPPQRR----AELTTLLAGIAKLDDREGAVRAQDDLFGYVAGLVE--HKRAEPGPDIISR 220
Query: 135 LPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEG 194
L + E + V L+ AG ++ +S N + LA + + + A +
Sbjct: 221 LNDGE--LTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALAD-------- 270
Query: 195 GGKVTYEDLAKMTYLEQVISEALRLYPLVNCL--FRECTQDYAIPDSPHVIPKGVLVHIP 252
D+ + + + E LR + R ++D I G LV
Sbjct: 271 ------PDV-----MARAVEEVLRTARAGGSVLPPRYASEDMEFGG--VTIRAGDLVLFD 317
Query: 253 TYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
D ++ P EF+ R + + FG G CIG
Sbjct: 318 LGLPNFDERAFTGPEEFDAARTPNPHLT---------FGHGIWHCIG 355
Score = 31.1 bits (71), Expect = 0.40
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
V L+ AG ++ +S N + L
Sbjct: 229 DRVAHLAMGLLFAGLDSVASIMDNGVVLL 257
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 51.5 bits (124), Expect = 1e-07
Identities = 37/225 (16%), Positives = 68/225 (30%), Gaps = 43/225 (19%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEK------DL---ML 135
VP R+ S+ +++ + YL MI + + ++
Sbjct: 158 VPRDDRDMFMKLCHGHLDASLSQKRRAALGDKFS-RYLLAMIA--RERKEPGEGMIGAVV 214
Query: 136 PESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGG 195
E +E+ ++LAG + S + + + E D R +
Sbjct: 215 AEYGDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGD--------- 265
Query: 196 GKVTYEDLAKMTYLEQVISEALRLYPLV-NCLFRECTQDYAIPDSPHVIPKGVLVHIPTY 254
E ++ + E +R + + R +D + I KG V
Sbjct: 266 -----EQS-----AQRAVDELIRYLTVPYSPTPRIAREDLTLAG--QEIKKGDSVICSLP 313
Query: 255 ALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
A D AL D + R + + FG G C+G
Sbjct: 314 AANRDPALAPDVDRLDVTREPIPHVA---------FGHGVHHCLG 349
Score = 30.7 bits (70), Expect = 0.59
Identities = 5/29 (17%), Positives = 12/29 (41%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
+E+ ++LAG + S + +
Sbjct: 224 EELRGFCVQVMLAGDDNISGMIGLGVLAM 252
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 51.5 bits (124), Expect = 1e-07
Identities = 46/232 (19%), Positives = 78/232 (33%), Gaps = 47/232 (20%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKR------VDYLQLMIELYEK------D 132
+P E D+ L ++ YL+ E+ D
Sbjct: 154 LPPMDHEQFGDWSGALVDIQMDDPTDPALAERIADVLNPLTAYLKARCA--ERRADPGDD 211
Query: 133 LM--LPESE---RVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREV 187
L+ L +E R + +E + L+LAGH T++ N++ L + D A
Sbjct: 212 LISRLVLAEVDGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAA--- 268
Query: 188 QKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGV 247
ED + + ++ E LR P + R T+ + IP V
Sbjct: 269 -------------EDPGR---IPAIVEEVLRYRPPFPQMQRTTTKATEVAG--VPIPADV 310
Query: 248 LVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
+V+ + D+ DP F+P R + + FG G C+G
Sbjct: 311 MVNTWVLSANRDSDAHDDPDRFDPSR--KSGGAAQL-----SFGHGVHFCLG 355
Score = 32.2 bits (74), Expect = 0.17
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
+E + L+LAGH T++ N++ L + D A +
Sbjct: 229 EEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAED 270
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 51.1 bits (123), Expect = 1e-07
Identities = 36/230 (15%), Positives = 71/230 (30%), Gaps = 49/230 (21%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEK----DLM------ 134
+P+ + + +S + K ++ ++Y+ ++E LM
Sbjct: 152 IPQEDGPKLFRSLSIAFMSSADPIPAAKINWDRDIEYMAGILE--NPNITTGLMGELSRL 209
Query: 135 -LPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKE 193
+ + + + AG ++ S T L L ++++ +
Sbjct: 210 RKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEK------- 262
Query: 194 GGGKVTYEDLAKMTYLEQVISEALRLYPLV-NCLFRECTQDYAIPDSPHVIPKGVLVHIP 252
+L + + E LR+ + L R T D + D ++ KG LV +
Sbjct: 263 -------PEL-----IPAGVEELLRINLSFADGLPRLATADIQVGD--VLVRKGELVLVL 308
Query: 253 TYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAP---FGDGPRICIG 299
D + +P DR P FG G C G
Sbjct: 309 LEGANFDPEHFPNPGSIELDRPNP-----------TSHLAFGRGQHFCPG 347
Score = 31.1 bits (71), Expect = 0.43
Identities = 6/29 (20%), Positives = 10/29 (34%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
+ + AG ++ S T L L
Sbjct: 221 ELFATIGVTFFGAGVISTGSFLTTALISL 249
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 51.1 bits (123), Expect = 2e-07
Identities = 42/227 (18%), Positives = 76/227 (33%), Gaps = 43/227 (18%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEK------DLM---- 134
VP E + T S R+ A E DYL +++E ++ D++
Sbjct: 160 VPFNDLEYLTQQNAIRTNGSSTAREASAANQELL-DYLAILVE--QRLVEPKDDIISKLC 216
Query: 135 -LPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKE 193
I + V F+L++AG+ T + + LA + + + +
Sbjct: 217 TEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLK--------- 267
Query: 194 GGGKVTYEDLAKMTYLEQVISEALRLYPLV-NCLFRECTQDYAIPDSPHVIPKGVLVHIP 252
+ + Q + E R + + R +D I D ++ +
Sbjct: 268 -------ANPSLA---PQFVEELCRYHTASALAIKRTAKEDVMIGD--KLVRANEGIIAS 315
Query: 253 TYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
+ D ++ +P EFN +R P P FG G CI
Sbjct: 316 NQSANRDEEVFENPDEFNMNRKWP-------PQDPLGFGFGDHRCIA 355
Score = 31.0 bits (71), Expect = 0.50
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
+ V F+L++AG+ T + + L
Sbjct: 228 SDAVQIAFLLLVAGNATMVNMIALGVATL 256
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 50.7 bits (122), Expect = 2e-07
Identities = 40/227 (17%), Positives = 70/227 (30%), Gaps = 45/227 (19%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEK------DLM---- 134
VP R D + + E A L +++ E+ DL+
Sbjct: 157 VPVERRAEFQDIAEAMMRVDQDAAATEAAGMRLG-GLLYQLVQ--ERRANPGDDLISALI 213
Query: 135 -LPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKE 193
+ + V+ +++ L++A H+T++ L + + R +
Sbjct: 214 TTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLRED------- 266
Query: 194 GGGKVTYEDLAKMTYLEQVISEALRLYPLV-NCLFRECTQDYAIPDSPHVIPKGVLVHIP 252
L + + E LR + R T+D + I KG V
Sbjct: 267 -------PSL-----VGNAVEELLRYLTIGQFGGERVATRDVELGG--VRIAKGEQVVAH 312
Query: 253 TYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
A D A +P F+ R + + FG G CIG
Sbjct: 313 VLAADFDPAFVEEPERFDITRRPAPHLA---------FGFGAHQCIG 350
Score = 30.7 bits (70), Expect = 0.59
Identities = 5/29 (17%), Positives = 13/29 (44%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
+++ L++A H+T++ L
Sbjct: 225 MFLMNAAGTLLIAAHDTTACMIGLGTALL 253
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 50.7 bits (122), Expect = 2e-07
Identities = 42/232 (18%), Positives = 76/232 (32%), Gaps = 49/232 (21%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKR------VDYLQLMIELYEK------D 132
+PE + L S + + A Y + ++ + D
Sbjct: 167 IPEEDHTWLRANAVALQEASTTRARDGRGYARAEAASQEFTRYFRREVD--RRGGDDRDD 224
Query: 133 LM-----LPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREV 187
L+ ++ + + +V L+ AGHET+++ + L +++V D+ R
Sbjct: 225 LLTLLVRARDTGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTT- 283
Query: 188 QKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGV 247
+ + E +R P V + R +D + D H IP+G
Sbjct: 284 -------------PES-----TPAAVEELMRYDPPVQAVTRWAYEDIRLGD--HDIPRGS 323
Query: 248 LVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
V + D A + DP + R A FG G C+G
Sbjct: 324 RVVALLGSANRDPARFPDPDVLDVHRAAERQVG---------FGLGIHYCLG 366
Score = 30.3 bits (69), Expect = 0.83
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
+V L+ AGHET+++ + L +++V D+ R
Sbjct: 242 DGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTT 283
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 50.7 bits (122), Expect = 2e-07
Identities = 41/234 (17%), Positives = 73/234 (31%), Gaps = 49/234 (20%)
Query: 85 VPEAAREP--------VADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIEL-----YEK 131
VP E L E K A + + L +++ E
Sbjct: 164 VPAECDEKFRRFGSATARALGVGLVPRVDEETKTLVASVTEGLALLHGVLDERRRNPLEN 223
Query: 132 DLM-----LPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 186
D++ + +E+V+ V +I AG +T+ + L + E + + E
Sbjct: 224 DVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE 283
Query: 187 VQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLV-NCLFRECTQDYAIPDSPHVIPK 245
L + + E LR ++ R QD I K
Sbjct: 284 --------------PGL-----MRNALDEVLRFDNILRIGTVRFARQDLEYCG--ASIKK 322
Query: 246 GVLVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
G +V + + D ++S P F+ R + + +G GP +C G
Sbjct: 323 GEMVFLLIPSALRDGTVFSRPDVFDVRRDTSASLA---------YGRGPHVCPG 367
Score = 31.1 bits (71), Expect = 0.46
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
+E+V+ V +I AG +T+ + L + E + + E
Sbjct: 242 KELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE 283
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 50.3 bits (121), Expect = 3e-07
Identities = 43/251 (17%), Positives = 79/251 (31%), Gaps = 61/251 (24%)
Query: 55 VTYEDLAKMTYLEQVISDKTQGSNSDNTGSVPEAAREPVADYFTKLTTTSIEMRKQEKAQ 114
V D + T S ++ T + A E Y L
Sbjct: 173 VPSADHDRFTRWSGAFL-----STAEVTAEEMQEAAEQAYAYMGDLI------------- 214
Query: 115 AEKRV----DYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVL 170
+R D + +++ ++ L E QE++ L++AG+E++++ + +
Sbjct: 215 DRRRKEPTDDLVSALVQARDQQDSLSE-------QELLDLAIGLLVAGYESTTTQIADFV 267
Query: 171 HELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLV--NCLFR 228
+ L E++ + +L + + E R PL R
Sbjct: 268 YLLMTRPELRRQLLDR--------------PEL-----IPSAVEELTRWVPLGVGTAFPR 308
Query: 229 ECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYA 288
+D + I G V T A D A + D + DR ++
Sbjct: 309 YAVEDVTLRG--VTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTPNQHLG-------- 358
Query: 289 PFGDGPRICIG 299
FG G C+G
Sbjct: 359 -FGHGVHHCLG 368
Score = 31.1 bits (71), Expect = 0.49
Identities = 7/29 (24%), Positives = 19/29 (65%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
QE++ L++AG+E++++ + ++ L
Sbjct: 242 QELLDLAIGLLVAGYESTTTQIADFVYLL 270
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 50.4 bits (121), Expect = 3e-07
Identities = 38/224 (16%), Positives = 78/224 (34%), Gaps = 47/224 (20%)
Query: 55 VTYEDLAKMTYLEQVISDKTQGSNSDNTGSVPEAAREPVAD---YFTKLTTTSIEMRKQE 111
+ D ++ + ++ G + + + + AD Y T L E R+
Sbjct: 189 IPKADHQRIFHW----TNVILGFGDPDLATDFDEFMQVSADIGAYATAL----AEDRRVN 240
Query: 112 KAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLH 171
D ++E L +E+ S +L++AG+ET+ + T+ +
Sbjct: 241 HHD-----DLTSSLVEAEVDGERLSS-------REIASFFILLVVAGNETTRNAITHGVL 288
Query: 172 ELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECT 231
L+ E +D+ + ++ L + E +R V + R T
Sbjct: 289 ALSRYPEQRDRWWSD-------------FDGL-----APTAVEEIVRWASPVVYMRRTLT 330
Query: 232 QDYAIPDSPHVIPKG--VLVHIPTYALQTDAALWSDPLEFNPDR 273
QD + + G V + + D + ++DP F+ R
Sbjct: 331 QDIELRG--TKMAAGDKVSLWYC--SANRDESKFADPWTFDLAR 370
Score = 33.5 bits (77), Expect = 0.083
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
+E+ S +L++AG+ET+ + T+ + L+ E +D+ +
Sbjct: 262 REIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSD 303
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 50.3 bits (121), Expect = 3e-07
Identities = 37/225 (16%), Positives = 70/225 (31%), Gaps = 40/225 (17%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEK-----DLML---- 135
+ + RE + Y + + ++ E+ + + E ++
Sbjct: 169 LKQEGRENLLPYAGLVFNAFGPPNELRQSAIERSAPHQAYVAEQCQRPNLAPGGFGACIH 228
Query: 136 -PESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEG 194
I +E V L+ AG +T+ + ++ LA + + R
Sbjct: 229 AFSDTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLR---------- 278
Query: 195 GGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTY 254
D + EA+R V FR T+D + I +G V +
Sbjct: 279 ------ADPSL---ARNAFEEAVRFESPVQTFFRTTTRDVELAG--ATIGEGEKVLMFLG 327
Query: 255 ALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
+ D W DP ++ R + FG G +C+G
Sbjct: 328 SANRDPRRWDDPDRYDITRKTSGHVG---------FGSGVHMCVG 363
Score = 29.9 bits (68), Expect = 0.98
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELA 31
+E V L+ AG +T+ + ++ LA
Sbjct: 239 EEAPLLVRSLLSAGLDTTVNGIAAAVYCLA 268
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 50.3 bits (121), Expect = 3e-07
Identities = 38/225 (16%), Positives = 67/225 (29%), Gaps = 43/225 (19%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEK------DL---ML 135
+P + + S ++ + A YL ++ + L ++
Sbjct: 167 IPRDDQREFVRRIRRNADLSRGLKARAADSAAFN-RYLDNLLA--RQRADPDDGLLGMIV 223
Query: 136 PESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGG 195
+ + +E+ LIL G ET + + L N +
Sbjct: 224 RDHGDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFES--------- 274
Query: 196 GKVTYEDLAKMTYLEQVISEALRLYPLVNC-LFRECTQDYAIPDSPHVIPKGVLVHIPTY 254
+ E+V++E +R V R +D I +I G V
Sbjct: 275 -----PEK-----AERVVNELVRYLSPVQAPNPRLAIKDVVIDG--QLIKAGDYVLCSIL 322
Query: 255 ALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
D AL DP + +R A + FG G C+G
Sbjct: 323 MANRDEALTPDPDVLDANRAAVSDVG---------FGHGIHYCVG 358
Score = 30.3 bits (69), Expect = 0.69
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
+E+ LIL G ET + + L
Sbjct: 233 EELKGLCTALILGGVETVAGMIGFGVLAL 261
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 49.9 bits (120), Expect = 4e-07
Identities = 37/250 (14%), Positives = 75/250 (30%), Gaps = 61/250 (24%)
Query: 55 VTYEDLAKMTYLEQVISDKTQGSNSDNTGSVPEAAREPVADYFTKLTTTSIEMRKQEKAQ 114
+ DL + ++ ++T A + L
Sbjct: 169 IPRHDLEFFRDVTRISGS------RNSTAEQVSEALGGLFGLLGGLV------------- 209
Query: 115 AEKRV----DYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVL 170
AE+R D + ++ + + ++++S + + I AG ET++S
Sbjct: 210 AERREEPRDDLISKLVTDHLVPGNVTT-------EQLLSTLGITINAGRETTTSMIALST 262
Query: 171 HELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNC-LFRE 229
L E+ + R++ DL + + E LR+ + + R
Sbjct: 263 LLLLDRPELPAELRKD--------------PDL-----MPAAVDELLRVLSVADSIPLRV 303
Query: 230 CTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAP 289
+D + +P V D + DP + R + +
Sbjct: 304 AAEDIELSG--RTVPADDGVIALLAGANHDPEQFDDPERVDFHRTDNHHVA--------- 352
Query: 290 FGDGPRICIG 299
FG G C+G
Sbjct: 353 FGYGVHQCVG 362
Score = 31.1 bits (71), Expect = 0.49
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
++++S + + I AG ET++S L
Sbjct: 237 EQLLSTLGITINAGRETTTSMIALSTLLL 265
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 49.9 bits (120), Expect = 4e-07
Identities = 42/227 (18%), Positives = 80/227 (35%), Gaps = 46/227 (20%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKR--VDYLQLMIELYEK----DLM---- 134
VP A ++F + ++ + A + YL +I ++ L+
Sbjct: 165 VPYADH----EFFQDASKRLVQSTDAQSALTARNDLAGYLDGLITQFQTEPGAGLVGALV 220
Query: 135 -LPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKE 193
+ I +E++S +L++AGHET++S ++ + L + E R +
Sbjct: 221 ADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD------- 273
Query: 194 GGGKVTYEDLAKMTYLEQVISEALRLYPLVNC-LFRECTQDYAIPDSPHVIPKGVLVHIP 252
L + + E LR + + R T D + +I G V +
Sbjct: 274 -------RSL-----VPGAVEELLRYLAIADIAGGRVATADIEVEG--QLIRAGEGVIVV 319
Query: 253 TYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
D ++ DP + R A + + FG G C+G
Sbjct: 320 NSIANRDGTVYEDPDALDIHRSARHHLA---------FGFGVHQCLG 357
Score = 30.7 bits (70), Expect = 0.65
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
+E++S +L++AGHET++S ++ + L
Sbjct: 232 EELISTAMLLLIAGHETTASMTSLSVITL 260
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 49.5 bits (119), Expect = 5e-07
Identities = 46/229 (20%), Positives = 77/229 (33%), Gaps = 50/229 (21%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKR--VDYLQLMIELYEK------DLM-- 134
VP D+F TT + E + Y+ +I K DL
Sbjct: 166 VPYTDH----DFFQSRTTMMVSRTSMEDRRRAFAELRAYIDDLIT--RKESEPGDDLFSR 219
Query: 135 ---LPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVY 191
E + +VS F+L+ AGHET+++ + + L + E +
Sbjct: 220 QIARQRQEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKAN----- 274
Query: 192 KEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLF-RECTQDYAIPDSPHVIPKGVLVH 250
+ E LR + + + + R T+D I I G V
Sbjct: 275 ---------PGR-----TPMAVEELLRYFTIADGVTSRLATEDVEIGG--VSIKAGEGVI 318
Query: 251 IPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
+ + D A++ DP + +R A + + FG GP C+G
Sbjct: 319 VSMLSANWDPAVFKDPAVLDVERGARHHLA---------FGFGPHQCLG 358
Score = 30.7 bits (70), Expect = 0.61
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
+VS F+L+ AGHET+++ + + L
Sbjct: 233 AGLVSLAFLLLTAGHETTANMISLGVVGL 261
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 49.5 bits (119), Expect = 5e-07
Identities = 45/231 (19%), Positives = 77/231 (33%), Gaps = 48/231 (20%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKRV-----DYLQLMIELYEK------DL 133
V R+ + L T QE Q D+ + I + DL
Sbjct: 144 VRPEQRDMFLRWSDDLVTFLSSHVSQEDFQITMDAFAAYNDFTRATIA--ARRADPTDDL 201
Query: 134 M--LPESE---RVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQ 188
+ L SE + E+V ++++ G ET+ T + +L N++ D +R+
Sbjct: 202 VSVLVSSEVDGERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRD-- 259
Query: 189 KVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVL 248
L L I E LR V + R T D + G
Sbjct: 260 ------------PSL-----LPGAIEEMLRWTAPVKNMCRVLTADTEFHG--TALCAGEK 300
Query: 249 VHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
+ + + D A++ +P +F+ R + + FG G C+G
Sbjct: 301 MMLLFESANFDEAVFCEPEKFDVQRNPNSHLA---------FGFGTHFCLG 342
Score = 33.4 bits (77), Expect = 0.092
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
E+V ++++ G ET+ T + +L N++ D +R+
Sbjct: 218 DELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRD 259
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 49.2 bits (118), Expect = 6e-07
Identities = 35/236 (14%), Positives = 60/236 (25%), Gaps = 58/236 (24%)
Query: 85 VPEAAREPV---ADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEK------DLM- 134
VPE A Y +IE + D +
Sbjct: 165 VPEEDWTQFDGWTQAIVAANAVDGATTGALDAVGSMM-AYFTGLIE--RRRTEPADDAIS 221
Query: 135 ------LPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQ 188
+ +++ F ++ G++T + + L + +
Sbjct: 222 HLVAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLL---- 277
Query: 189 KVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVL 248
+D + + E LRL V L R T+D I D IP G
Sbjct: 278 ------------DDPEG---IPDAVEELLRLTSPVQGLARTTTRDVTIGD--TTIPAGRR 320
Query: 249 VHIPTYALQTDAALWS---DPLEF--NPDRFAPENESKIVPGSYAPFGDGPRICIG 299
V + S D ++ + P + F G C+G
Sbjct: 321 VLL---------LYGSANRDERQYGPDAAELDVTRC----PRNILTFSHGAHHCLG 363
Score = 30.7 bits (70), Expect = 0.54
Identities = 4/42 (9%), Positives = 16/42 (38%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
+++ F ++ G++T + + L + + +
Sbjct: 238 LSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDD 279
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 49.9 bits (118), Expect = 6e-07
Identities = 49/291 (16%), Positives = 75/291 (25%), Gaps = 96/291 (32%)
Query: 51 GGGKVTYEDLAKMTYLEQVISDKTQGSNSD-----NTGSV--PEAAREPVADYFTKLT-- 101
G GK +A L S K Q N + PE E + ++
Sbjct: 160 GSGKTW---VALDVCL----SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN 212
Query: 102 -------TTSIEMRKQEKAQAEKRVDYLQLMIELYEKDLM-LPE--SERVIRMQEVVSGV 151
+++I++R + + L L + YE L+ L + +
Sbjct: 213 WTSRSDHSSNIKLRIHS---IQAELRRL-LKSKPYENCLLVLLNVQNAKAWN-------A 261
Query: 152 F-----VLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKM 206
F +L+ T T+ L D K L K
Sbjct: 262 FNLSCKILLT----TRFKQVTDFLSAATTTHISLD----HHSMTLTPDEVK---SLLLK- 309
Query: 207 TYLEQVIS----EALRLYPLVNCLFRE------CTQDY-----------AIPDS-----P 240
YL+ E L P + E T D I S P
Sbjct: 310 -YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEP 368
Query: 241 H----------VIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPENESK 281
V P HIPT L +W D ++ + +
Sbjct: 369 AEYRKMFDRLSVFPPS--AHIPTILLSL---IWFDVIKSDVMVVVNKLHKY 414
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 49.2 bits (118), Expect = 6e-07
Identities = 39/222 (17%), Positives = 72/222 (32%), Gaps = 54/222 (24%)
Query: 58 EDLAKMTYLEQVISDKTQGSNSDNTGSVPEAAREPVADYFTKLTTTSIEMRKQEKAQAEK 117
ED K+ + + T + + P+A+ + Y K+ EK
Sbjct: 188 EDRGKLFHWSNEM---TGNEDPEYAHIDPKASSAELIGYAMKMA-------------EEK 231
Query: 118 RV----DYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHEL 173
D + +I+ L + E V +L +AG+ET+ ++ T +
Sbjct: 232 AKNPADDIVTQLIQADIDGEKLSD-------DEFGFFVVMLAVAGNETTRNSITQGMMAF 284
Query: 174 AYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQD 233
A + + + + + E E +R V R +D
Sbjct: 285 AEHPDQWELYK----------------KVRP-----ETAADEIVRWATPVTAFQRTALRD 323
Query: 234 YAIPDSPHVIPKG--VLVHIPTYALQTDAALWSDPLEFNPDR 273
Y + I KG V++ + D ++ DP FN R
Sbjct: 324 YELSG--VQIKKGQRVVMFYR--SANFDEEVFQDPFTFNILR 361
Score = 34.2 bits (79), Expect = 0.051
Identities = 9/42 (21%), Positives = 21/42 (50%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
E V +L +AG+ET+ ++ T + A + + + ++
Sbjct: 256 DEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKV 297
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 49.2 bits (118), Expect = 7e-07
Identities = 36/226 (15%), Positives = 73/226 (32%), Gaps = 46/226 (20%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEK------DLM--LP 136
+P + + +T E AE + + +I E+ D+M +
Sbjct: 153 LPPEDGDTYRRWVWAITHVENPEEGAE-IFAELV-AHARTLIA--ERRTNPGNDIMSRVI 208
Query: 137 ESE---RVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKE 193
S+ + +++ +L+L G + ++ ++V LA++ E RR +
Sbjct: 209 MSKIDGESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIE----LRRRLI----- 259
Query: 194 GGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPT 253
+ + E LR Y + R TQ+ + D + G +
Sbjct: 260 -------AHPEL---IPNAVDELLRFYGPAM-VGRLVTQEVTVGD--ITMKPGQTAMLWF 306
Query: 254 YALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
D + + P +R P + G G C+G
Sbjct: 307 PIASRDRSAFDSPDNIVIER---------TPNRHLSLGHGIHRCLG 343
Score = 31.4 bits (72), Expect = 0.29
Identities = 6/30 (20%), Positives = 16/30 (53%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELA 31
+++ +L+L G + ++ ++V LA
Sbjct: 220 DDLIGFFTILLLGGIDNTARFLSSVFWRLA 249
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 48.4 bits (116), Expect = 1e-06
Identities = 47/230 (20%), Positives = 77/230 (33%), Gaps = 51/230 (22%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKR--VDYLQLMIELYEK------DLM-- 134
VPE R F T + +AQ YL +I+ K DL+
Sbjct: 183 VPEPDR----AAFRVWTDAFVFPDDPAQAQTAMAEMSGYLSRLID--SKRGQDGEDLLSA 236
Query: 135 ----LPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKV 190
E + +E++ +L++AGHET+ + N ++ L + + R +
Sbjct: 237 LVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRAD---- 292
Query: 191 YKEGGGKVTYEDLAKMTYLEQVISEALRLYPLV-NCLFRECTQDYAIPDSPHVIPKGVLV 249
L L+ + E LR V + +R + + VIP G V
Sbjct: 293 ----------MTL-----LDGAVEEMLRYEGPVESATYRFPVEPVDLDG--TVIPAGDTV 335
Query: 250 HIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
+ + DP F+ R + + FG G CIG
Sbjct: 336 LVVLADAHRTPERFPDPHRFDIRRDTAGHLA---------FGHGIHFCIG 376
Score = 31.1 bits (71), Expect = 0.49
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
+E++ +L++AGHET+ + N ++ L
Sbjct: 251 EELLGMAHILLVAGHETTVNLIANGMYAL 279
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 48.0 bits (115), Expect = 1e-06
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 32/155 (20%)
Query: 145 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 204
E + + +L++AG+ET+++ +N + + + RE E+L
Sbjct: 197 IEKLGYIILLLIAGNETTTNLISNSVIDFTRFN--LWQRIRE--------------ENL- 239
Query: 205 KMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWS 264
+ I EALR P V R+ + + D I +G V + + D ++
Sbjct: 240 ----YLKAIEEALRYSPPVMRTVRKTKERVKLGD--QTIEEGEYVRVWIASANRDEEVFH 293
Query: 265 DPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
D +F PDR + S FG G +C+G
Sbjct: 294 DGEKFIPDRNPNPHLS---------FGSGIHLCLG 319
Score = 30.2 bits (69), Expect = 0.83
Identities = 8/42 (19%), Positives = 20/42 (47%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
E + + +L++AG+ET+++ +N + + Q
Sbjct: 197 IEKLGYIILLLIAGNETTTNLISNSVIDFTRFNLWQRIREEN 238
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 48.0 bits (115), Expect = 2e-06
Identities = 37/225 (16%), Positives = 66/225 (29%), Gaps = 42/225 (18%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEKD--------LMLP 136
VP A RE V + ++ +TS E+A+ ++ + L
Sbjct: 166 VPAADRERVHSWTRQIISTSGGAEAAERAKRGLY-GWITETVRARAGSEGGDVYSMLGAA 224
Query: 137 ESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGG 196
+ E V L + G + + + L +E+ + R
Sbjct: 225 VGRGEVGETEAVGLAGPLQIGGEAVTHNVGQMLYL-LLTRRELMARMRER---------- 273
Query: 197 KVTYEDLAKMTYLEQVISEALRLYPLVNC--LFRECTQDYAIPDSPHVIPKGVLVHIPTY 254
+ E LR L R +D + I G V++
Sbjct: 274 ----PGA-----RGTALDELLRWISHRTSVGLARIALEDVEVHG--TRIAAGEPVYVSYL 322
Query: 255 ALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
A D ++ DP + DR + + +G+G C G
Sbjct: 323 AANRDPDVFPDPDRIDLDRDPNPHLA---------YGNGHHFCTG 358
Score = 30.7 bits (70), Expect = 0.55
Identities = 4/26 (15%), Positives = 8/26 (30%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVL 27
E V L + G + + +
Sbjct: 233 TEAVGLAGPLQIGGEAVTHNVGQMLY 258
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 47.3 bits (113), Expect = 3e-06
Identities = 45/258 (17%), Positives = 84/258 (32%), Gaps = 67/258 (25%)
Query: 57 YEDLAKMTYLEQVI---------SDKTQGSNSDNTGSVPEAAREPVADYFTKLTTTSIEM 107
ED KM +L Q + + + + A YF L
Sbjct: 196 PEDEPKMLFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLA------ 249
Query: 108 RKQEKAQAEKRV----DYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSS 163
AE+R D ++ + + ++ + AGH+T+S
Sbjct: 250 -------AERRRNPTDDVATVIANAVVDGEPMSD-------RDTAGYYIITASAGHDTTS 295
Query: 164 STSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLV 223
++S LA + ++ + + + +L L ++ EA+R V
Sbjct: 296 ASSAGAALALARDPDLFARVKAD--------------RNL-----LPGIVEEAIRWTTPV 336
Query: 224 NCLFRECTQDYAIPDSPHVIPKG--VLVHIPTYALQTDAALWSDPLEFNPDRFAPENESK 281
R D + I G ++++ A D A + +P +F+P R A + +
Sbjct: 337 QHFMRTAATDTELCG--QKIAAGDWLMLNYV--AANHDPAQFPEPRKFDPTRPANRHLA- 391
Query: 282 IVPGSYAPFGDGPRICIG 299
FG G C+G
Sbjct: 392 --------FGAGSHQCLG 401
Score = 32.3 bits (74), Expect = 0.20
Identities = 8/42 (19%), Positives = 21/42 (50%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
++ + AGH+T+S++S LA + ++ + + +
Sbjct: 277 RDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKAD 318
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 46.8 bits (112), Expect = 4e-06
Identities = 47/228 (20%), Positives = 75/228 (32%), Gaps = 45/228 (19%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEK------DLM---- 134
+ EA + F K +T + E + + K DL
Sbjct: 162 IEEARLPRLKVLFEKFFSTQTPPEEVVATLTELA-SIMTDTVA--AKRAAPGDDLTSALI 218
Query: 135 -LPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKE 193
E+ + E+VS + +++ AGHET+ S N + L+ + E +
Sbjct: 219 QASENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSG------- 271
Query: 194 GGGKVTYEDLAKMTYLEQVISEALRLYPLV-NCLFRECTQDYAIPDSPHVIPKGVLVHIP 252
E V+ E LR + L R +D + D VIP G + +
Sbjct: 272 -------EAE-----WSAVVEETLRFSTPTSHVLIRFAAEDVPVGD--RVIPAGDALIVS 317
Query: 253 TYALQTD-AALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
AL D A F+ R + + FG GP +C G
Sbjct: 318 YGALGRDERAHGPTADRFDLTRTS--------GNRHISFGHGPHVCPG 357
Score = 31.0 bits (71), Expect = 0.44
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
E+VS + +++ AGHET+ S N + L
Sbjct: 230 AEIVSTLQLMVAAGHETTISLIVNAVVNL 258
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 46.5 bits (111), Expect = 5e-06
Identities = 49/254 (19%), Positives = 88/254 (34%), Gaps = 59/254 (23%)
Query: 57 YEDLAKMTYLEQVI---SDKTQGSNSDNTGSVPEAAREPVA------DYFTKLTTTSIEM 107
+D M L Q + + + + S EAAR DYF
Sbjct: 174 EDDEPLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNGF----TVD 229
Query: 108 RKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSSTST 167
R+ D + L+ + + + + + + AGH+T+SS+S
Sbjct: 230 RRSCPKD-----DVMSLLANSKLDGNYIDD-------KYINAYYVAIATAGHDTTSSSSG 277
Query: 168 NVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLF 227
+ L+ N E A+ + L + +++ EA+R V
Sbjct: 278 GAIIGLSRNPEQLALAKSD--------------PAL-----IPRLVDEAVRWTAPVKSFM 318
Query: 228 RECTQDYAIPDSPHVIPKG--VLVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPG 285
R D + I +G +++ P + D ++S+P EF+ RF P
Sbjct: 319 RTALADTEVRG--QNIKRGDRIMLSYP--SANRDEEVFSNPDEFDITRF---------PN 365
Query: 286 SYAPFGDGPRICIG 299
+ FG G +C+G
Sbjct: 366 RHLGFGWGAHMCLG 379
Score = 32.3 bits (74), Expect = 0.16
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
+ + + + AGH+T+SS+S + L+ N E A+ +
Sbjct: 255 KYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSD 296
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 46.4 bits (111), Expect = 5e-06
Identities = 40/225 (17%), Positives = 77/225 (34%), Gaps = 50/225 (22%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEK----DLM--LPES 138
+P++ F + I ++ E + + + K ++ L S
Sbjct: 113 IPDSDM----PLFKLWSDYIIGNKRDENFNYV--NNRMVSRLLEIFKSDSHGIINVLAGS 166
Query: 139 E---RVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGG 195
R + M E + + +LI+ G+ET+++ N++ + N ++ D A +
Sbjct: 167 SLKNRKLTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR-------- 218
Query: 196 GKVTYEDLAKMTYLEQVISEALRLYPLVNCL-FRECTQDYAIPDSPHVIPKGVLVHIPTY 254
+ E LR Y + L R +D I + I KG V +
Sbjct: 219 --------------SGFVEETLRYYSPIQFLPHRFAAEDSYINN--KKIKKGDQVIVYLG 262
Query: 255 ALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
+ D + +P F R + FG G +C+G
Sbjct: 263 SANRDETFFDEPDLFKIGR----------REMHLAFGIGIHMCLG 297
Score = 33.7 bits (78), Expect = 0.061
Identities = 10/42 (23%), Positives = 24/42 (57%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARRE 43
E + + +LI+ G+ET+++ N++ + N ++ D A +
Sbjct: 176 DEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKN 217
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 46.5 bits (111), Expect = 6e-06
Identities = 45/225 (20%), Positives = 74/225 (32%), Gaps = 42/225 (18%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEKD--------LMLP 136
VP R + + + ++S E+A+ E Y +I L L
Sbjct: 163 VPATDRHSMHTWTQLILSSSHGAEVSERAKNEMN-AYFSDLIGLRSDSAGEDVTSLLGAA 221
Query: 137 ESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGG 196
I + E V +L + G ++++ L E+ ++ R E
Sbjct: 222 VGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHL-LLSRPELAERLRSE---------- 270
Query: 197 KVTYEDLAKMTYLEQVISEALRLYPLVNC--LFRECTQDYAIPDSPHVIPKGVLVHIPTY 254
++ + I E LR P N L R +D I I G V++
Sbjct: 271 ----PEI-----RPRAIDELLRWIPHRNAVGLSRIALEDVEIKG--VRIRAGDAVYVSYL 319
Query: 255 ALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
A D ++ DP + +R + S FG GP C G
Sbjct: 320 AANRDPEVFPDPDRIDFERSPNPHVS---------FGFGPHYCPG 355
Score = 29.5 bits (67), Expect = 1.2
Identities = 4/26 (15%), Positives = 10/26 (38%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVL 27
E V +L + G ++++
Sbjct: 230 SEAVGLAVLLQIGGEAVTNNSGQMFH 255
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 46.1 bits (110), Expect = 7e-06
Identities = 45/227 (19%), Positives = 78/227 (34%), Gaps = 45/227 (19%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKR-VDYLQLMIELYEKD--------LML 135
VP R+ + + + L S +K A + YL ++E + L+
Sbjct: 156 VPAEDRDDFSAWSSVLVDDS---PADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLA 212
Query: 136 PESERVIRM--QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKE 193
E R+ +E+V+ +L++AGHET+ + N + L + + + +
Sbjct: 213 VSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAED------- 265
Query: 194 GGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLF-RECTQDYAIPDSPHVIPKGVLVHIP 252
L + + E LR V+ R +D IP G +V +
Sbjct: 266 -------PSL-----ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSG--VTIPAGEMVMLG 311
Query: 253 TYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
A DA +P + R A FG G C+G
Sbjct: 312 LAAANRDADWMPEPDRLDITRDASGGVF---------FGHGIHFCLG 349
Score = 30.7 bits (70), Expect = 0.67
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
+E+V+ +L++AGHET+ + N + L
Sbjct: 224 EELVAMAMLLLIAGHETTVNLIGNGVLAL 252
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 45.7 bits (109), Expect = 9e-06
Identities = 42/231 (18%), Positives = 79/231 (34%), Gaps = 47/231 (20%)
Query: 85 VPEAAREPV---ADYFTKLTTTSIEMRKQEKAQAEKR--VDYLQLMIELYEK-------- 131
P + V + S + K + DYL IE ++
Sbjct: 168 FPLEDYDTVGRLSIETNLGLALSNDQDILVKVEQGLGRMFDYLVAAIE--KRKVEPGDDL 225
Query: 132 --DLMLPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQK 189
D++ + V+ E+ + V +++AG+ET++ +++ A + + K +
Sbjct: 226 TSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKEN--- 282
Query: 190 VYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNC-LFRECTQDYAIPDSPHVIPKGVL 248
+L Q + E LR P + R +D+ + IP G
Sbjct: 283 -----------PEL-----APQAVEEVLRWSPTLPVTATRVAAEDFEVNG--VRIPTGTP 324
Query: 249 VHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
V + + D +++D F+ S A FG GP C+G
Sbjct: 325 VFMCAHVAHRDPRVFADADRFDITVKRE-------APSIA-FGGGPHFCLG 367
Score = 29.9 bits (68), Expect = 1.0
Identities = 6/29 (20%), Positives = 17/29 (58%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
E+ + V +++AG+ET++ +++
Sbjct: 241 YELRTLVATVLVAGYETTNHQLALAMYDF 269
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 44.1 bits (105), Expect = 3e-05
Identities = 32/227 (14%), Positives = 64/227 (28%), Gaps = 53/227 (23%)
Query: 85 VPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKR--VDYLQLMIELYEK------DL--- 133
VP + +++ S E R + V+Y + + K +
Sbjct: 149 VPRDDQ----AELSRMIRESRESRLPRQRTLSGLGIVNYTKRLTS--GKRRDPGDGMIGV 202
Query: 134 MLPESERVIRMQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKE 193
++ E I +E+ ++ E ++ + L + + R +
Sbjct: 203 IVREHGAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREK------- 255
Query: 194 GGGKVTYEDLAKMTYLEQVISEALRLYPLVNC-LFRECTQDYAIPDSPHVIPKGVLVHIP 252
+L ++ E LR +V R D + I G ++
Sbjct: 256 -------PEL-----IDSATEEVLRHASIVEAPAPRVALADVRMAG--RDIHAGDVLTCS 301
Query: 253 TYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
A + F+ R + + FG G CIG
Sbjct: 302 -----MLATNRAPGDRFDITREKATHMA---------FGHGIHHCIG 334
Score = 30.3 bits (69), Expect = 0.79
Identities = 3/29 (10%), Positives = 10/29 (34%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHEL 30
+E+ ++ E ++ + L
Sbjct: 214 EELAGLAEGNLIMAAEQMAAQLAVAVLLL 242
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 43.5 bits (103), Expect = 4e-05
Identities = 23/149 (15%), Positives = 52/149 (34%), Gaps = 30/149 (20%)
Query: 151 VFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLE 210
+ AG E +++T + + ++ + ++ + A +
Sbjct: 216 ALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADD--------------PAAA-----Q 256
Query: 211 QVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFN 270
+ ++E LRL+P ++ R T + + + HVI +G V + A D ++++P +
Sbjct: 257 RTVAEVLRLHPALHLERRTATAEVRLGE--HVIGEGEEVVVVVAAANRDPEVFAEPDRLD 314
Query: 271 PDRFAPENESKIVPGSYAPFGDGPRICIG 299
DR A
Sbjct: 315 VDR---------PDADRALSAHRGHPGRL 334
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 42.9 bits (102), Expect = 6e-05
Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 33/155 (21%)
Query: 145 QEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 204
E +L++AG+ET+++ N + + D R + L
Sbjct: 198 LEKEGYFILLMIAGNETTTNLIGNAIEDFTLY-NSWDYVREKG--------------ALK 242
Query: 205 KMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWS 264
+ EALR P V R + I D VI +G LV + + D ++
Sbjct: 243 -------AVEEALRFSPPVMRTIRVTKEKVKIRD--QVIDEGELVRVWIASANRDEEVFK 293
Query: 265 DPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIG 299
DP F PDR + S FG G +C+G
Sbjct: 294 DPDSFIPDRTPNPHLS---------FGSGIHLCLG 319
Score = 29.5 bits (67), Expect = 1.3
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 2 QEVVSGVFVLILAGHETSSSTSTNVLHELA 31
E +L++AG+ET+++ N + +
Sbjct: 198 LEKEGYFILLMIAGNETTTNLIGNAIEDFT 227
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 31.6 bits (71), Expect = 0.37
Identities = 50/341 (14%), Positives = 87/341 (25%), Gaps = 144/341 (42%)
Query: 11 LILAGH---ETSSSTSTNVLHELAYNQEVQDKARREVQKIYKEGGGKVTYED-------- 59
L L+ H E T +A ++Q+ + KI E +D
Sbjct: 9 LTLS-HGSLEHVLLVPTA-SFFIA--SQLQE----QFNKILPEPTEGFAADDEPTTPAEL 60
Query: 60 LAK-MTYLEQVISDKTQGS------------------NSD----------NTGSVPEAAR 90
+ K + Y+ ++ G +D + +
Sbjct: 61 VGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTK 120
Query: 91 EPVADYFTKLTTTSIEMRKQ------EKAQAEK-RV-----------DYLQLMIELYEKD 132
E + +Y T K+ ++ DY + + +LY+
Sbjct: 121 ELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQ-- 178
Query: 133 LMLPESERVIRMQEVVSGVFV--LILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKV 190
V V LI S L EL + + +KV
Sbjct: 179 ---------------TYHVLVGDLI--------KFSAETLSELI-------RTTLDAEKV 208
Query: 191 YKEGGGKVTYEDLAK----------MTYLEQV-ISEALRLYPLVNCLFRECTQ--DYAI- 236
+ +G ++ + YL + IS PL+ + Q Y +
Sbjct: 209 FTQG------LNILEWLENPSNTPDKDYLLSIPIS-----CPLI-GV----IQLAHYVVT 252
Query: 237 -------PDSPHVIPKGVLVHIPTYALQTDAAL-----WSD 265
P KG H L T A+ W
Sbjct: 253 AKLLGFTPGELRSYLKGATGHSQ--GLVTAVAIAETDSWES 291
Score = 28.5 bits (63), Expect = 3.2
Identities = 26/138 (18%), Positives = 45/138 (32%), Gaps = 45/138 (32%)
Query: 172 ELAYN-----QEVQDKARREVQKVY------------KE-----GG--GKVTYEDLAKMT 207
+L Y Q+V ++A + Y GG GK E+ + M
Sbjct: 1634 DL-YKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMI 1692
Query: 208 YLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQ-----TDAAL 262
+ E ++ L+ + + E + Y KG+L + Q + A
Sbjct: 1693 F-ETIVDGKLKTEKIFKEI-NEHSTSYTFRS-----EKGLL-SATQFT-QPALTLMEKAA 1743
Query: 263 WSDPLE----FNPDR-FA 275
+ D L+ D FA
Sbjct: 1744 FED-LKSKGLIPADATFA 1760
Score = 28.5 bits (63), Expect = 3.3
Identities = 42/267 (15%), Positives = 76/267 (28%), Gaps = 92/267 (34%)
Query: 29 ELAYN-----QEVQDKARREVQKIY------------KE-----GG--GKVTYEDLAKMT 64
+L Y Q+V ++A + Y GG GK E+ + M
Sbjct: 1634 DL-YKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMI 1692
Query: 65 YLEQVISDKTQGSNSDNTGSVPEAAREPVADY-------------FTK--LTTTSI---- 105
+ +T T + + E Y FT+ LT
Sbjct: 1693 F-------ETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFE 1745
Query: 106 EMRKQEKAQAEKRV---------------DYLQL--MIELYEK-----DLMLPESER--- 140
+++ + A+ D + + ++E+ + +P E
Sbjct: 1746 DLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDELGRS 1805
Query: 141 VIRMQEVVSGVFVLILAGH------ETSSSTSTNVLHELA-YN----QEV---QDKARRE 186
M + G + E + ++ E+ YN Q V +A
Sbjct: 1806 NYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLV-EIVNYNVENQQYVAAGDLRALDT 1864
Query: 187 VQKVYKE-GGGKVTYEDLAKMTYLEQV 212
V V K+ +L K LE+V
Sbjct: 1865 VTNVLNFIKLQKIDIIELQKSLSLEEV 1891
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 30.3 bits (67), Expect = 0.47
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 9/38 (23%)
Query: 111 EKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEVV 148
EK +K LQ ++LY +S + ++ +
Sbjct: 18 EKQALKK----LQASLKLYA-----DDSAPALAIKATM 46
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid
dehydrogenase complex...; cubic core, HOMO trimer,
oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus}
PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Length = 262
Score = 30.7 bits (70), Expect = 0.54
Identities = 14/71 (19%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 184 RREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHV- 242
R E++ + G K+++ M + + S L +P++N E Q+ S ++
Sbjct: 71 REELKPIAFARGIKLSF-----MPFFLKAASLGLLQFPILNASVDENCQNITYKASHNIG 125
Query: 243 ----IPKGVLV 249
+G++V
Sbjct: 126 IAMDTEQGLIV 136
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein,
protein binding; 2.80A {Homo sapiens}
Length = 306
Score = 30.2 bits (68), Expect = 0.69
Identities = 15/98 (15%), Positives = 33/98 (33%), Gaps = 7/98 (7%)
Query: 67 EQVISDKTQGSNSDNTGSVPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKR-VDYLQLM 125
E ++ + ++E D + + S E+ K+ + AEK + + +
Sbjct: 46 ENILESEPIVYR--RIIVPHNVSKEFCTDSGLVVPSISYELHKKLLSVAEKHGLTLERRL 103
Query: 126 ----IELYEKDLMLPESERVIRMQEVVSGVFVLILAGH 159
+ + L L + + V V +L G
Sbjct: 104 EMTGVCASQMALTLLGGPNRLNPKNVHQRPTVALLCGP 141
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein,
protein binding; 2.20A {Homo sapiens}
Length = 259
Score = 29.8 bits (67), Expect = 0.88
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Query: 84 SVPE-AAREPVADYFTKLTTTSIEMRKQEKAQAEKR-VDYLQLM----IELYEKDLMLPE 137
VP ++E D + + S E+ K+ + AEK + + + + + L L
Sbjct: 13 IVPHNVSKEFCTDSGLVVPSISYELHKKLLSVAEKHGLTLERRLEMTGVCASQMALTLLG 72
Query: 138 SERVIRMQEVVSGVFVLILAGH 159
+ + V V +L G
Sbjct: 73 GPNRLNPKNVHQRPTVALLCGP 94
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics,
PSI-2, protein structure initiative; 2.00A
{Mycobacterium tuberculosis}
Length = 250
Score = 28.8 bits (65), Expect = 1.7
Identities = 4/51 (7%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Query: 186 EVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAI 236
++ + ++T +++ AL+ ++N + + + +
Sbjct: 53 RLRDRFVSAAPEITP-----FALTLRLLVIALKHNVILNSTWVDSGEGPQV 98
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase;
2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB:
1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A
1dpc_A
Length = 243
Score = 28.7 bits (65), Expect = 2.0
Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 5/50 (10%)
Query: 184 RREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCLFRECTQD 233
R + V ++ G K+T + L + + L+ P N Q
Sbjct: 56 RVAQKAVAEKAGVKLTV-----LPLLLKACAYLLKELPDFNSSLAPSGQA 100
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A
{Thermoplasma acidophilum dsm 1728}
Length = 224
Score = 28.8 bits (65), Expect = 2.0
Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Query: 178 EVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVN 224
EV + + K KVT +L +++ L+ YP +N
Sbjct: 37 EVDVTSMVSILDSAKARNRKVTV-----TGFLARIVPSILKQYPYLN 78
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase...; oxidoreductase, multienzyme complex;
HET: TPW; 2.35A {Bacillus stearothermophilus} PDB:
3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Length = 428
Score = 28.0 bits (63), Expect = 4.0
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Query: 184 RREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVN 224
R++ + + E G K+T+ + Y+ + + ALR YP++N
Sbjct: 239 RKKFKAIAAEKGIKLTF-----LPYVVKALVSALREYPVLN 274
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella
enterica}
Length = 210
Score = 27.6 bits (62), Expect = 4.6
Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 250 HIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIGERKL 303
+P + + W L F + + P + DG R+ +G L
Sbjct: 73 GVPVIGPEKEDEFWLQGLPAQSRMFGLDECQPLTPDRW--LNDGDRVSVGNVTL 124
>2juz_A UPF0352 protein HI0840; homodimer, helix, structural genomics,
PSI-2, protein structure initiative; NMR {Haemophilus
influenzae} SCOP: a.284.1.1
Length = 80
Score = 25.6 bits (56), Expect = 6.1
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 82 TGSVPEAAREPVADYFTKLTTTSIEMRKQ 110
T SVP+ E +A F+ +++ R +
Sbjct: 46 TTSVPQTQCEALAQAFSNSLINAVKTRLE 74
>2jpq_A UPF0352 protein VP2129; dimer, all alpha, homodimer, structural
genomics, PSI-2, protein structure initiative; NMR
{Vibrio parahaemolyticus} SCOP: a.284.1.1
Length = 83
Score = 26.0 bits (57), Expect = 6.2
Identities = 7/40 (17%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Query: 82 TGSVPEAAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDY 121
V + R+ +A+ F + +S+ + K E +
Sbjct: 46 NQRVAASQRKLIAEKFAQALMSSL---ETPKTHLEHHHHH 82
>2juw_A UPF0352 protein SO_2176; homodimer, helix, dimer, all alpha,
northeast structural GEN consortium, NESG, structural
genomics; NMR {Shewanella oneidensis} SCOP: a.284.1.1
PDB: 2qti_A
Length = 80
Score = 25.6 bits (56), Expect = 7.9
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 82 TGSVPEAAREPVADYFTKLTTTSIEMRKQ 110
VP +R+ VA+ F K S++ +
Sbjct: 46 ERKVPSESRQAVAEQFAKALAQSVKSNLE 74
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 26.7 bits (58), Expect = 8.3
Identities = 9/45 (20%), Positives = 21/45 (46%), Gaps = 16/45 (35%)
Query: 34 QEVQDKARREVQKIYKEGGGKVTYEDLAKMTYLEQVISDKTQGSN 78
QE ++KA++++++ + EQV +K + +N
Sbjct: 110 QEWREKAKKDLEEWNQR--------------QSEQV--EKNKINN 138
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.314 0.131 0.366
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,499,288
Number of extensions: 268334
Number of successful extensions: 848
Number of sequences better than 10.0: 1
Number of HSP's gapped: 702
Number of HSP's successfully gapped: 176
Length of query: 303
Length of database: 6,701,793
Length adjustment: 93
Effective length of query: 210
Effective length of database: 4,105,140
Effective search space: 862079400
Effective search space used: 862079400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (25.7 bits)