RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14275
(303 letters)
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 465
Score = 127 bits (319), Expect = 4e-34
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 5/207 (2%)
Query: 95 DYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVL 154
S+E + + R ++ + + + Q ++ V L
Sbjct: 212 QEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDK---SDPSSEFHHQNLILTVLSL 268
Query: 155 ILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVIS 214
AG ET+S+T + V ++ ++E+++V +D AKM Y + VI
Sbjct: 269 FFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR-PPALDDRAKMPYTDAVIH 327
Query: 215 EALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRF 274
E RL L+ +VIPK V + D + P FNP F
Sbjct: 328 EIQRLGDLIPFGVPHTVTKDTQFR-GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF 386
Query: 275 APENESKIVPGSYAPFGDGPRICIGER 301
N + + PF G RIC+GE
Sbjct: 387 LDANGALKRNEGFMPFSLGKRICLGEG 413
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 472
Score = 123 bits (309), Expect = 9e-33
Identities = 71/207 (34%), Positives = 115/207 (55%), Gaps = 3/207 (1%)
Query: 95 DYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVL 154
T S++ K+ + + ++ L + + ++ ES + + E+V+ +
Sbjct: 216 REVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIF 275
Query: 155 ILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVIS 214
I AG+ET+SS + +++ELA + +VQ K + E+ V TY+ + +M YL+ V++
Sbjct: 276 IFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKA-PPTYDTVLQMEYLDMVVN 334
Query: 215 EALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRF 274
E LRL+P+ L R C +D I IPKGV+V IP+YAL D W++P +F P+RF
Sbjct: 335 ETLRLFPIAMRLERVCKKDVEING--MFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF 392
Query: 275 APENESKIVPGSYAPFGDGPRICIGER 301
+ +N+ I P Y PFG GPR CIG R
Sbjct: 393 SKKNKDNIDPYIYTPFGSGPRNCIGMR 419
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 463
Score = 114 bits (284), Expect = 2e-29
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 144 MQEVVSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDL 203
+ ++ V LI+AG ET+++ + +A +Q + ++E+ + G K +++D
Sbjct: 258 KENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNG-KPSWDDK 316
Query: 204 AKMTYLEQVISEALRLYPLVNC-LFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAAL 262
KM Y E V+ E LR +V +F ++D + + IPKG V Y++ D
Sbjct: 317 CKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRG--YSIPKGTTVITNLYSVHFDEKY 374
Query: 263 WSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIGER 301
W DP F+P+RF + + PF G R C+GE
Sbjct: 375 WRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEH 413
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus
megaterium [TaxId: 1404]}
Length = 453
Score = 97.1 bits (240), Expect = 2e-23
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 95 DYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVL 154
L I RK Q++ + ++ PE+ + + + +
Sbjct: 208 KVMNDLVDKIIADRKASGEQSDDLLTHMLNG--------KDPETGEPLDDENIRYQIITF 259
Query: 155 ILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVIS 214
++AGHET+S + L+ L N V KA E +V + +Y+ + ++ Y+ V++
Sbjct: 260 LIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV--PSYKQVKQLKYVGMVLN 317
Query: 215 EALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWS-DPLEFNPDR 273
EALRL+P +D + + + KG + + L D +W D EF P+R
Sbjct: 318 EALRLWPTAPAFSLYAKEDTVLGG-EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER 376
Query: 274 FAPENESKIVPGSYAPFGDGPRICIGER 301
F EN S I ++ PFG+G R CIG++
Sbjct: 377 F--ENPSAIPQHAFKPFGNGQRACIGQQ 402
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 467
Score = 96.3 bits (238), Expect = 5e-23
Identities = 44/196 (22%), Positives = 77/196 (39%), Gaps = 2/196 (1%)
Query: 106 EMRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSST 165
E K+ + + + L + + ++ + + L AG ET+S+T
Sbjct: 221 EKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTT 280
Query: 166 STNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNC 225
L L + EV K + E+++V +D + M Y + V+ E R L+
Sbjct: 281 LRYALLLLLKHPEVTAKVQEEIERVIGRNRS-PCMQDRSHMPYTDAVVHEVQRYIDLLPT 339
Query: 226 LFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPG 285
I ++IPKG + I ++ D + +P F+P F E +
Sbjct: 340 SLP-HAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSK 398
Query: 286 SYAPFGDGPRICIGER 301
+ PF G RIC+GE
Sbjct: 399 YFMPFSAGKRICVGEA 414
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora
erythraea [TaxId: 1836]}
Length = 402
Score = 74.5 bits (181), Expect = 1e-15
Identities = 38/195 (19%), Positives = 63/195 (32%), Gaps = 36/195 (18%)
Query: 107 MRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSSTS 166
+ E+ + E D L +I + + + + + E+ S VL+LAG E S S
Sbjct: 195 LDLVERRRTEPGDDLLSALIRVQD------DDDGRLSADELTSIALVLLLAGFEASVSLI 248
Query: 167 TNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCL 226
+ L + + RR+ + L + E LR
Sbjct: 249 GIGTYLLLTHPDQLALVRRD-------------------PSALPNAVEEILRYIAPPETT 289
Query: 227 FRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGS 286
R ++ I IP+ V + A D + DP F+ R
Sbjct: 290 TRFAAEEVEIGG--VAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRD---------TRG 338
Query: 287 YAPFGDGPRICIGER 301
+ FG G C+G
Sbjct: 339 HLSFGQGIHFCMGRP 353
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus
subtilis [TaxId: 1423]}
Length = 411
Score = 68.5 bits (166), Expect = 1e-13
Identities = 38/218 (17%), Positives = 59/218 (27%), Gaps = 39/218 (17%)
Query: 88 AAREPVADYFTKLTTTSIEMRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEV 147
AR ++ + IE + + ++ E L I +
Sbjct: 180 RARPRAEEWIEVM----IEDARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIELI-- 233
Query: 148 VSGVFVLILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMT 207
+L S L + + ++ +
Sbjct: 234 ------NVLRPIVAISYFLVFSALALHEHPKYKE------------------WLRSGNSR 269
Query: 208 YLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPL 267
E + E R YP L +D+ + KG V + Y D LW P
Sbjct: 270 EREMFVQEVRRYYPFGPFLGALVKKDF--VWNNCEFKKGTSVLLDLYGTNHDPRLWDHPD 327
Query: 268 EFNPDRFAPENESKIVPGSYAPFGDG----PRICIGER 301
EF P+RFA E+ P G G C GE
Sbjct: 328 EFRPERFAEREEN---LFDMIPQGGGHAEKGHRCPGEG 362
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 401
Score = 67.1 bits (162), Expect = 3e-13
Identities = 17/83 (20%), Positives = 25/83 (30%), Gaps = 10/83 (12%)
Query: 219 LYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPEN 278
+ + R D A+PD I +G + A D F+ R E
Sbjct: 280 EPAVKHLPLRYAVTDIALPDG-RTIARGEPILASYAAANRHPDWHEDADTFDATRTVKE- 337
Query: 279 ESKIVPGSYAPFGDGPRICIGER 301
+ FG G C+G
Sbjct: 338 --------HLAFGHGVHFCLGAP 352
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp.
[TaxId: 306]}
Length = 428
Score = 66.4 bits (160), Expect = 7e-13
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 241 HVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIGE 300
I +G + + + D ++S+P EF+ RF P + FG G +C+G+
Sbjct: 330 QNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRF---------PNRHLGFGWGAHMCLGQ 380
Query: 301 R 301
Sbjct: 381 H 381
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol
demethylase (cyp51) {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 445
Score = 63.0 bits (151), Expect = 8e-12
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 263 WSDPLEFNPDRF-APENESKIVPGSYAPFGDGPRICIGER 301
+ DP +F P R+ P E + ++ PFG G C+G
Sbjct: 355 FPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAA 394
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId:
1902]}
Length = 399
Score = 62.1 bits (149), Expect = 1e-11
Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 9/82 (10%)
Query: 220 YPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPENE 279
P N + + I G V++ A D ++ DP + +R
Sbjct: 278 IPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERS----- 332
Query: 280 SKIVPGSYAPFGDGPRICIGER 301
P + FG GP C G
Sbjct: 333 ----PNPHVSFGFGPHYCPGGM 350
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 394
Score = 60.2 bits (144), Expect = 6e-11
Identities = 36/203 (17%), Positives = 57/203 (28%), Gaps = 36/203 (17%)
Query: 106 EMRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRM-------QEVVSGVFVLILAG 158
+K+ A +K YL MI K+ V+ +E+ ++LAG
Sbjct: 174 LSQKRRAALGDKFSRYLLAMIARERKEPGEGMIGAVVAEYGDDATDEELRGFCVQVMLAG 233
Query: 159 HETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALR 218
+ S + + + E D + + V
Sbjct: 234 DDNISGMIGLGVLAMLRHPEQID------------------AFRGDEQSAQRAVDELIRY 275
Query: 219 LYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPEN 278
L + R +D + I KG V A D AL D + R
Sbjct: 276 LTVPYSPTPRIAREDLTLAG--QEIKKGDSVICSLPAANRDPALAPDVDRLDVTRE---- 329
Query: 279 ESKIVPGSYAPFGDGPRICIGER 301
P + FG G C+G
Sbjct: 330 -----PIPHVAFGHGVHHCLGAA 347
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase
{Fungus (Fusarium oxysporum) [TaxId: 5507]}
Length = 399
Score = 60.2 bits (144), Expect = 6e-11
Identities = 26/148 (17%), Positives = 46/148 (31%), Gaps = 27/148 (18%)
Query: 154 LILAGHETSSSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVI 213
L++AG+ T + + LA + + + + + V
Sbjct: 232 LLVAGNATMVNMIALGVATLAQHPDQLAQLKAN------------------PSLAPQFVE 273
Query: 214 SEALRLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDR 273
+ R +D I D +G++ + D ++ +P EFN +R
Sbjct: 274 ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASN--QSANRDEEVFENPDEFNMNR 331
Query: 274 FAPENESKIVPGSYAPFGDGPRICIGER 301
P P FG G CI E
Sbjct: 332 KWP-------PQDPLGFGFGDHRCIAEH 352
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 403
Score = 59.8 bits (143), Expect = 7e-11
Identities = 19/85 (22%), Positives = 28/85 (32%), Gaps = 11/85 (12%)
Query: 218 RLYPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWS-DPLEFNPDRFAP 276
P + L R +D + VIP G + + AL D F+ R +
Sbjct: 278 FSTPTSHVLIRFAAEDVPV--GDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG 335
Query: 277 ENESKIVPGSYAPFGDGPRICIGER 301
+ FG GP +C G
Sbjct: 336 --------NRHISFGHGPHVCPGAA 352
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 403
Score = 59.8 bits (143), Expect = 1e-10
Identities = 30/195 (15%), Positives = 49/195 (25%), Gaps = 29/195 (14%)
Query: 107 MRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSSTS 166
+ + + + +++ + + +E+ LIL G ET +
Sbjct: 192 DSAAFNRYLDNLLARQRADPDDGLLGMIVRDHGDNVTDEELKGLCTALILGGVETVAGMI 251
Query: 167 TNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVNCL 226
+ L N + V L P+
Sbjct: 252 GFGVLALLDNPGQIELLFES------------------PEKAERVVNELVRYLSPVQAPN 293
Query: 227 FRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGS 286
R +D I VL I D AL DP + +R S
Sbjct: 294 PRLAIKDVVIDGQLIKAGDYVLCSI--LMANRDEALTPDPDVLDANRA---------AVS 342
Query: 287 YAPFGDGPRICIGER 301
FG G C+G
Sbjct: 343 DVGFGHGIHYCVGAA 357
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum
[TaxId: 56]}
Length = 401
Score = 59.5 bits (142), Expect = 1e-10
Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 12/105 (11%)
Query: 200 YEDLAKMTYLEQVISEALRLYPLVNCLFRECTQDYAIPDSPHV---IPKGVLVHIPTYAL 256
E L + ++ AL + + R T +A D + I KG +V + +
Sbjct: 259 PEALELVKAEPGLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSA 318
Query: 257 QTDAALWSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIGER 301
D ++S P F+ R + +G GP +C G
Sbjct: 319 LRDGTVFSRPDVFDVRRD---------TSASLAYGRGPHVCPGVS 354
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 366
Score = 56.4 bits (134), Expect = 1e-09
Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 11/82 (13%)
Query: 220 YPLVNCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPENE 279
P V R+ + I +G V + + D ++ D +F PDR
Sbjct: 251 SPPVMRTVRKTKERV--KLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRN----- 303
Query: 280 SKIVPGSYAPFGDGPRICIGER 301
P + FG G +C+G
Sbjct: 304 ----PNPHLSFGSGIHLCLGAP 321
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId:
111955]}
Length = 367
Score = 56.0 bits (133), Expect = 2e-09
Identities = 38/197 (19%), Positives = 67/197 (34%), Gaps = 40/197 (20%)
Query: 105 IEMRKQEKAQAEKRVDYLQLMIELYEKDLMLPESERVIRMQEVVSGVFVLILAGHETSSS 164
+E+ K + + R + + + L E E+ +L++AG+ET+++
Sbjct: 165 LELISFSKKELDSRKGKEIVDLTGKIANSNLSELEKEGYF-------ILLMIAGNETTTN 217
Query: 165 TSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLVN 224
N + + + + + EALR P V
Sbjct: 218 LIGNAIEDFTLYNSWDYVREK----------------------GALKAVEEALRFSPPVM 255
Query: 225 CLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVP 284
R + I VI +G LV + + D ++ DP F PDR P
Sbjct: 256 RTIRVTKEKVKIR--DQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRT---------P 304
Query: 285 GSYAPFGDGPRICIGER 301
+ FG G +C+G
Sbjct: 305 NPHLSFGSGIHLCLGAP 321
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
Length = 385
Score = 55.9 bits (133), Expect = 2e-09
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 263 WSDPLEFNPDRFAPENESKIVPGSYAPFGDGPRICIGER 301
+ D F P+RF E + G Y PFG G R+C+G
Sbjct: 304 FPDGEAFRPERFLEERGTP--SGRYFPFGLGQRLCLGRD 340
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2)
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 395
Score = 52.9 bits (125), Expect = 2e-08
Identities = 16/78 (20%), Positives = 22/78 (28%), Gaps = 8/78 (10%)
Query: 224 NCLFRECTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIV 283
I ++ KG LV + D + +P DR P
Sbjct: 279 FADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNPT------ 332
Query: 284 PGSYAPFGDGPRICIGER 301
S+ FG G C G
Sbjct: 333 --SHLAFGRGQHFCPGSA 348
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida
[TaxId: 303]}
Length = 404
Score = 49.3 bits (116), Expect = 2e-07
Identities = 12/72 (16%), Positives = 22/72 (30%), Gaps = 9/72 (12%)
Query: 230 CTQDYAIPDSPHVIPKGVLVHIPTYALQTDAALWSDPLEFNPDRFAPENESKIVPGSYAP 289
+ KG + +P D + P+ + R S+
Sbjct: 289 RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQ---------KVSHTT 339
Query: 290 FGDGPRICIGER 301
FG G +C+G+
Sbjct: 340 FGHGSHLCLGQH 351
>d2jpqa1 a.284.1.1 (A:1-75) Hypothetical protein VP2129 {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 75
Score = 24.7 bits (54), Expect = 4.1
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 84 SVPEAAREPVADYFTKLTTTSIEMRKQ 110
V + R+ +A+ F + +S+E K
Sbjct: 48 RVAASQRKLIAEKFAQALMSSLETPKT 74
>d1twfb_ e.29.1.1 (B:) RBP2 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 1207
Score = 26.4 bits (57), Expect = 5.4
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 138 SERVIRMQEVVSGVFVLILAGHETSSSTST 167
SE+V+ QE +G V + S +
Sbjct: 191 SEKVLIAQERSAGNIVQVFKKAAPSPISHV 220
>d2jrxa1 a.284.1.1 (A:1-75) Uncharacterized protein YejL
{Escherichia coli [TaxId: 562]}
Length = 75
Score = 24.3 bits (53), Expect = 7.4
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 84 SVPEAAREPVADYFTKLTTTSIEMRKQ 110
S+ A R+ +A+ F + +SI K
Sbjct: 48 SIAPAQRQAIANSFARALQSSINEDKA 74
>d2juza1 a.284.1.1 (A:1-72) Uncharacterized protein HI0840
{Haemophilus influenzae [TaxId: 727]}
Length = 72
Score = 24.0 bits (52), Expect = 7.4
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 84 SVPEAAREPVADYFTKLTTTSIEMR 108
SVP+ E +A F+ +++ R
Sbjct: 48 SVPQTQCEALAQAFSNSLINAVKTR 72
>d1jlva2 c.47.1.5 (A:1-84) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-3 [TaxId: 123217]}
Length = 84
Score = 24.1 bits (52), Expect = 8.3
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 195 GGKVTYEDLAKMTYLEQVISEALRLYP 221
G +E A TYL + + +LYP
Sbjct: 58 NGFALWESRAICTYLAEKYGKDDKLYP 84
>d2qtia1 a.284.1.1 (A:8-72) Uncharacterized protein SO2176
{Shewanella oneidensis [TaxId: 70863]}
Length = 65
Score = 23.5 bits (51), Expect = 9.1
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 84 SVPEAAREPVADYFTKLTTTSIE 106
VP +R+ VA+ F K S++
Sbjct: 41 KVPSESRQAVAEQFAKALAQSVK 63
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.131 0.366
Gapped
Lambda K H
0.267 0.0393 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,058,296
Number of extensions: 47712
Number of successful extensions: 198
Number of sequences better than 10.0: 1
Number of HSP's gapped: 181
Number of HSP's successfully gapped: 35
Length of query: 303
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 218
Effective length of database: 1,240,546
Effective search space: 270439028
Effective search space used: 270439028
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 53 (25.1 bits)