RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy14277
(217 letters)
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 215 bits (551), Expect = 3e-68
Identities = 59/155 (38%), Positives = 91/155 (58%), Gaps = 3/155 (1%)
Query: 55 MQEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDL 114
E+V+ + I G+E ++S + +++ELA + +VQ K + E+ V TY+ +
Sbjct: 270 DLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKA-PPTYDTV 328
Query: 115 AKMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
+M YL+ V++E LRL+P+ L R C +D I I KGV+V IP+YAL D W
Sbjct: 329 LQMEYLDMVVNETLRLFPIAMRLERVCKKDVEING--MFIPKGVVVMIPSYALHRDPKYW 386
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
++P +F P+RF+ +N+ I P Y PFG GPR CI
Sbjct: 387 TEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCI 421
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 185 bits (473), Expect = 6e-57
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 2/154 (1%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
EV + L++ G S++TS + LA ++ +Q K E + V E +TY+ L
Sbjct: 251 DEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLK 310
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
+ L++ I E LRL P + R + + I G V + Q W
Sbjct: 311 DLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAG--YTIPPGHQVCVSPTVNQRLKDSWV 368
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+ L+FNPDR+ +N + +YVPFG G CI
Sbjct: 369 ERLDFNPDRYLQDNPASGEKFAYVPFGAGRHRCI 402
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 184 bits (468), Expect = 4e-56
Identities = 42/222 (18%), Positives = 82/222 (36%), Gaps = 16/222 (7%)
Query: 1 MFTPGIFFFYLFILFFTTTTTTTTTTTNNNNNNNNNNNNNKNNINSPNFLGVIRMQEVVS 60
G+ +F L T + N + + + LGV + + V +
Sbjct: 209 TLDLGLPWFLQEPLLHTFRLPAFLIKSTYNKLYDYFQSVATPVMEQAEKLGVPKDEAVHN 268
Query: 61 GVFVLIVGGHENSTSTSTNVLHELA-YNQEVQDKARREVQKVYKE-GGGKVTYEDLAKMT 118
+F + N L + + + + E++ K G G VT E + +M
Sbjct: 269 ILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMP 328
Query: 119 YLEQVISEALRLYPLGNGLFRECTQDYAIP--DSPHVIQKGVLVHIPTYALQTDATLWSD 176
+ V+ E+LR+ P + + ++ I D+ ++KG ++ D ++
Sbjct: 329 LTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDR 388
Query: 177 PLEFNPDRFAPENESKIVPGSYVPFGDGP---------RTCI 209
P E+ PDRF + E+ YV + +GP + C
Sbjct: 389 PEEYVPDRFVGDGEA---LLKYVWWSNGPETESPTVENKQCA 427
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 182 bits (463), Expect = 2e-55
Identities = 51/154 (33%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
QE+ V ++ G E ST +L LA + E D+ R EV+ V GG V +ED+
Sbjct: 262 QEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVT--GGRPVAFEDVR 319
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
K+ + VI EA+RL P L R + + + I G + YA+Q D +
Sbjct: 320 KLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGG--YRIPAGADIIYSPYAIQRDPKSYD 377
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
D LEF+PDR+ PE + + + PF G R C
Sbjct: 378 DNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCP 411
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 177 bits (450), Expect = 1e-53
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 4/155 (2%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
E+ ++ GH S+ T++ L EL +++ E+ ++Y G V++ L
Sbjct: 244 DEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYG-DGRSVSFHALR 302
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
++ LE V+ E LRL+P L R ++ + H I +G LV +
Sbjct: 303 QIPQLENVLKETLRLHPPLIILMRVAKGEFEVQG--HRIHEGDLVAASPAISNRIPEDFP 360
Query: 176 DPLEFNPDRFA-PENESKIVPGSYVPFGDGPRTCI 209
DP +F P R+ P E + +++PFG G C+
Sbjct: 361 DPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCV 395
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 177 bits (451), Expect = 2e-53
Identities = 37/222 (16%), Positives = 76/222 (34%), Gaps = 18/222 (8%)
Query: 2 FTPGIFFFYLFILFFTTTTTTTTTTTNNNNNNNNNNNNNKNNINSPNFLGVIRMQEVVSG 61
+ G+ L T + ++ + + + LG+ R + +
Sbjct: 228 LSIGLPRVIEEPLIHTFSLPPALVKSDYQRLYEFFLESAGEILVEADKLGISREEATHN- 286
Query: 62 VFVLIVGGHENSTSTSTNVLHELAY-----NQEVQDKARREVQKVYKEGGGKVTYEDLAK 116
L+ N+ + + +V ++ E++ V K GG++T + K
Sbjct: 287 ---LLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEK 343
Query: 117 MTYLEQVISEALRLYPLGNGLFRECTQDYAIP--DSPHVIQKGVLVHIPTYALQTDATLW 174
M + V+ E LR P + +D I D+ ++ G +++ D ++
Sbjct: 344 MELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIF 403
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFG-------DGPRTCI 209
EF P+RF E K++ G G + C
Sbjct: 404 DRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCA 445
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 168 bits (427), Expect = 2e-50
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 15/161 (9%)
Query: 55 MQEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDL 114
+ E+ + +L+ GHE TS ++ L + +++++ R+E K+ + ++T E L
Sbjct: 241 LPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKL--QLSQELTAETL 298
Query: 115 AKMTYLEQVISEALRLYPLGNGLFRECTQD-----YAIPDSPHVIQKGVLVHIPTYALQT 169
KM YL+QV+ E LRL P G FRE QD + P KG LV
Sbjct: 299 KKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFP-------KGWLVSYQISQTHA 351
Query: 170 DATLWSDPLEFNPDRFAPEN-ESKIVPGSYVPFGDGPRTCI 209
D L+ DP +F+P+RF P+ + P ++VPFG G R C+
Sbjct: 352 DPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECL 392
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 167 bits (426), Expect = 4e-50
Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+ ++ + GHE S + + EL+ E+ + + EV +V + +EDL
Sbjct: 242 EGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIG-SKRYLDFEDLG 300
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
++ YL QV+ E+LRLYP G FR ++ I + + TY + T +
Sbjct: 301 RLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDG--VRVPGNTPLLFSTYVMGRMDTYFE 358
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
DPL FNPDRF P +Y PF G R+CI
Sbjct: 359 DPLTFNPDRFGPGA--PKPRFTYFPFSLGHRSCI 390
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 164 bits (418), Expect = 8e-49
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 65 LIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQVI 124
++ GHE ++ + L+ L N V KA E +V +Y+ + ++ Y+ V+
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL--VDPVPSYKQVKQLKYVGMVL 318
Query: 125 SEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW-SDPLEFNPD 183
+EALRL+P +D + + ++KG + + L D T+W D EF P+
Sbjct: 319 NEALRLWPTAPAFSLYAKEDTVLGG-EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 184 RFAPENESKIVPGSYVPFGDGPRTCI 209
RF EN S I ++ PFG+G R CI
Sbjct: 378 RF--ENPSAIPQHAFKPFGNGQRACI 401
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 160 bits (406), Expect = 7e-47
Identities = 35/173 (20%), Positives = 68/173 (39%), Gaps = 20/173 (11%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGK------V 109
+ + + + N + +L L N E R E++ + + +
Sbjct: 261 EMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTL 320
Query: 110 TYEDLAKMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDS---PHVIQKG-VLVHIPTY 165
+ L L+ V+SE+LRL + RE D A+P + +++G L+ P
Sbjct: 321 PQKVLDSTPVLDSVLSESLRLTAAP-FITREVVVDLAMPMADGREFNLRRGDRLLLFPFL 379
Query: 166 ALQTDATLWSDPLEFNPDRFAPEN---------ESKIVPGSYVPFGDGPRTCI 209
+ Q D +++DP F +RF + + K + +P+G G C+
Sbjct: 380 SPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCL 432
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 160 bits (406), Expect = 7e-47
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 55 MQEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDL 114
+++ + V ++ GG + ++ T L+E+A N +VQD R EV + G L
Sbjct: 273 FEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQG-DMATML 331
Query: 115 AKMTYLEQVISEALRLYPLGNGLFRECTQD-----YAIPDSPHVIQKGVLVHIPTYALQT 169
+ L+ I E LRL+P+ L R D Y IP LV + YAL
Sbjct: 332 QLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIP-------AKTLVQVAIYALGR 384
Query: 170 DATLWSDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+ T + DP F+P R+ +++ I + FG G R C+
Sbjct: 385 EPTFFFDPENFDPTRWLSKDK-NITYFRNLGFGWGVRQCL 423
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 157 bits (400), Expect = 6e-46
Identities = 35/172 (20%), Positives = 72/172 (41%), Gaps = 19/172 (11%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+ V + +++ + + + +L +A + V++ +E+Q V G + +D+
Sbjct: 294 ENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVI--GERDIKIDDIQ 351
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
K+ +E I E++R P+ + + R+ +D I + ++KG + + + +
Sbjct: 352 KLKVMENFIYESMRYQPVVDLVMRKALEDDVIDG--YPVKKGTNIILNIGRMHRLE-FFP 408
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI----------VTIKKLLR 217
P EF + FA + PFG GPR C + LLR
Sbjct: 409 KPNEFTLENFAKNVP----YRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLR 456
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 156 bits (397), Expect = 1e-45
Identities = 38/174 (21%), Positives = 68/174 (39%), Gaps = 21/174 (12%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGK------- 108
E V++ N+ + L ++ N E A EV++ + G K
Sbjct: 256 LEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNP 315
Query: 109 --VTYEDLAKMTYLEQVISEALRLYPLGNGLFRECTQDYAIP--DSPHVIQKGVLVHIPT 164
++ +L + L+ +I E+LRL R +D+ + D + I+K ++ +
Sbjct: 316 ICLSQAELNDLPVLDSIIKESLRLSSAS-LNIRTAKEDFTLHLEDGSYNIRKDDIIALYP 374
Query: 165 YALQTDATLWSDPLEFNPDRFAPENES---------KIVPGSYVPFGDGPRTCI 209
+ D ++ DPL F DR+ EN + Y+PFG G C
Sbjct: 375 QLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICP 428
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 156 bits (396), Expect = 1e-45
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 55 MQEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDL 114
+E+ + V L + E + ++ +L+ L+ N + Q + +EVQ V + EDL
Sbjct: 281 KKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQ-TPRAEDL 339
Query: 115 AKMTYLEQVISEALRLYPLGNGLFRECTQD-----YAIPDSPHVIQKGVLVHIPTYALQT 169
M YL+ + E++RL P R + YA+P KG ++ + T L +
Sbjct: 340 RNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALP-------KGTVLTLNTQVLGS 392
Query: 170 DATLWSDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+ D +F P+R+ + + KI P +++PFG G R CI
Sbjct: 393 SEDNFEDSHKFRPERWLQKEK-KINPFAHLPFGIGKRMCI 431
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 152 bits (385), Expect = 4e-44
Identities = 31/156 (19%), Positives = 62/156 (39%), Gaps = 13/156 (8%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEV--QDKARREVQKVYKEGGGKVTYED 113
EV + + G S+ T+T + L + V + R+E+++
Sbjct: 252 HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF---PAQLNYNNV 308
Query: 114 LAKMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATL 173
+ +M + E+ E++R P L R+ D + +V+ KG ++ D
Sbjct: 309 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGS--YVVPKGDIIACSPLLSHHDEEA 366
Query: 174 WSDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+ +P ++P+R G+++ FG G CI
Sbjct: 367 FPEPRRWDPERDEKV------EGAFIGFGAGVHKCI 396
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 135 bits (343), Expect = 2e-38
Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 25/155 (16%)
Query: 55 MQEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDL 114
+ +S L+V GHE S T L++ + Q + +
Sbjct: 208 RERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA------------- 254
Query: 115 AKMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
EALRLYP L R + + + + G + + Y Q +
Sbjct: 255 ------LAAFQEALRLYPPAWILTRRLERPLLLGE--DRLPPGTTLVLSPYVTQRL--HF 304
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
D F P+RF E + G Y PFG G R C+
Sbjct: 305 PDGEAFRPERFLEERGTP--SGRYFPFGLGQRLCL 337
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 133 bits (336), Expect = 8e-37
Identities = 34/168 (20%), Positives = 58/168 (34%), Gaps = 18/168 (10%)
Query: 55 MQEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDL 114
+ + + + N+ + V+ L + E R E+Q G E
Sbjct: 251 AEMQRRAMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQG----GKHLRLEERQ 306
Query: 115 AKMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSP---HVIQKGVLVHI-PTYALQTD 170
+ V+ E LRL + R+ TQD I S + +++G + + P + Q D
Sbjct: 307 KNTPVFDSVLWETLRLTAAA-LITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMD 365
Query: 171 ATLWSDPLEFNPDRFAPENES---------KIVPGSYVPFGDGPRTCI 209
+ P F DRF + + V VP+G C
Sbjct: 366 PQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCP 413
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 129 bits (325), Expect = 1e-35
Identities = 29/150 (19%), Positives = 46/150 (30%), Gaps = 27/150 (18%)
Query: 64 VLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLEQV 123
+ ++ + L + + ++ R E
Sbjct: 238 INVLRPIVAISYFLVFSALALHEHPKYKEWLRSG------------------NSREREMF 279
Query: 124 ISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWSDPLEFNPD 183
+ E R YP G L +D+ + +KG V + Y D LW P EF P+
Sbjct: 280 VQEVRRYYPFGPFLGALVKKDFVWNN--CEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPE 337
Query: 184 RFAPENESKIVPGSYVPFGDGP----RTCI 209
RFA E+ +P G G C
Sbjct: 338 RFAEREEN---LFDMIPQGGGHAEKGHRCP 364
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 121 bits (305), Expect = 8e-33
Identities = 34/163 (20%), Positives = 52/163 (31%), Gaps = 38/163 (23%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
V + V ++ T V H L ++ +
Sbjct: 229 PHVAAVELVNVLRPTVAIAVYITFVAHALQTCSGIRAA-------------------LVQ 269
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQD-----YAIPDSPHVIQKGVLVHIPTYALQTD 170
+ Y E + E R YP + +QD A P +G V + Y D
Sbjct: 270 QPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFP-------EGRQVVLDLYGSNHD 322
Query: 171 ATLWSDPLEFNPDRFAPENESKIVPGSYVPFGDGP----RTCI 209
A W+DP EF P+RF +E +++P G G C
Sbjct: 323 AATWADPQEFRPERFRAWDED---SFNFIPQGGGDHYLGHRCP 362
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 79.5 bits (197), Expect = 1e-17
Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 28/168 (16%)
Query: 55 MQEVVSGVFVLIVGGHENSTSTSTNVLH----ELAYNQEVQDKARREVQKVYKEGGGK-V 109
+ + V L G T++ L + + +VQ + ++E+ V G +
Sbjct: 270 DENLRIVVADLFSAG----MVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVI--GQVRRP 323
Query: 110 TYEDLAKMTYLEQVISEALR---LYPLGNGLFRECTQD-----YAIPDSPHVIQKGVLVH 161
D A M Y VI E R + PLG + ++D + IP KG +
Sbjct: 324 EMGDQAHMPYTTAVIHEVQRFGDIVPLG--VTHMTSRDIEVQGFRIP-------KGTTLI 374
Query: 162 IPTYALQTDATLWSDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
++ D +W P F+P+ F + P +++PF G R C+
Sbjct: 375 TNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACL 422
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 79.2 bits (196), Expect = 2e-17
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 74 TSTSTNVLH----ELAYNQEVQDKARREVQKVYKEGGGK-VTYEDLAKMTYLEQVISEAL 128
T T+TNVL +A +Q + ++E+ + G +++D KM Y E V+ E L
Sbjct: 286 TETTTNVLRWAILFMALYPNIQGQVQKEIDLIM--GPNGKPSWDDKCKMPYTEAVLHEVL 343
Query: 129 R---LYPLGNGLFRECTQD-----YAIPDSPHVIQKGVLVHIPTYALQTDATLWSDPLEF 180
R + PLG +F ++D Y+IP KG V Y++ D W DP F
Sbjct: 344 RFCNIVPLG--IFHATSEDAVVRGYSIP-------KGTTVITNLYSVHFDEKYWRDPEVF 394
Query: 181 NPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+P+RF + + VPF G R C+
Sbjct: 395 HPERFLDSSGYFAKKEALVPFSLGRRHCL 423
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 78.8 bits (195), Expect = 2e-17
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 27/157 (17%)
Query: 65 LIVGGHENSTSTSTNVLH----ELAYNQEVQDKARREVQKV--YKEGGGKVTYEDLAKMT 118
L +GG T T+ + L L ++ E+Q + + E+ + +VTY+D A++
Sbjct: 287 LFIGG----TETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLP 342
Query: 119 YLEQVISEALRLYPLG-NGLFRECTQD-----YAIPDSPHVIQKGVLVHIPTYALQTDAT 172
L I+E LRL P+ L T+ Y IP +G++V D T
Sbjct: 343 LLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIP-------EGMVVIPNLQGAHLDET 395
Query: 173 LWSDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+W P EF PDRF + S + FG G R C+
Sbjct: 396 VWEQPHEFRPDRFLEPGAN----PSALAFGCGARVCL 428
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 78.4 bits (194), Expect = 3e-17
Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 22/149 (14%)
Query: 74 TSTSTNVLH----ELAYNQEVQDKARREVQKVYKEGGGK-VTYEDLAKMTYLEQVISEAL 128
T + L +VQ + + E+ +V G + D + Y+ + EA+
Sbjct: 292 QDTLSTALQWLLLLFTRYPDVQTRVQAELDQVV--GRDRLPCMGDQPNLPYVLAFLYEAM 349
Query: 129 RLYPLG-NGLFRECTQD-----YAIPDSPHVIQKGVLVHIPTYALQTDATLWSDPLEFNP 182
R + T + Y IP K +V + +++ D W +P F+P
Sbjct: 350 RFSSFVPVTIPHATTANTSVLGYHIP-------KDTVVFVNQWSVNHDPLKWPNPENFDP 402
Query: 183 DRFAPENES--KIVPGSYVPFGDGPRTCI 209
RF ++ K + + F G R CI
Sbjct: 403 ARFLDKDGLINKDLTSRVMIFSVGKRRCI 431
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 76.1 bits (188), Expect = 2e-16
Identities = 39/150 (26%), Positives = 58/150 (38%), Gaps = 23/150 (15%)
Query: 74 TSTSTNVLH----ELAYNQEVQDKARREVQKVYKEGGGK-VTYEDLAKMTYLEQVISEAL 128
T T + L E+Q K ++E+ V G + D ++ YLE I E
Sbjct: 295 FDTVTTAISWSLMYLVTKPEIQRKIQKELDTVI--GRERRPRLSDRPQLPYLEAFILETF 352
Query: 129 RLYPLG-NGLFRECTQD-----YAIPDSPHVIQKGVLVHIPTYALQTDATLWSDPLEFNP 182
R + T+D + IP K V + + + D LW DP EF P
Sbjct: 353 RHSSFLPFTIPHSTTRDTTLNGFYIP-------KKCCVFVNQWQVNHDPELWEDPSEFRP 405
Query: 183 DRFAPEN---ESKIVPGSYVPFGDGPRTCI 209
+RF + +K + + FG G R CI
Sbjct: 406 ERFLTADGTAINKPLSEKMMLFGMGKRRCI 435
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 75.6 bits (187), Expect = 3e-16
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 24/181 (13%)
Query: 41 KNNINSPNFLGVIRMQEVVSGVFVLIVGGHENSTSTSTNVLHELAY---NQEVQDKARRE 97
N ++ +++ + + G E +T++ V LA+ N +V+ K E
Sbjct: 257 NGNAGPDQDSELLSDNHILTTIGDIFGAGVE---TTTSVVKWTLAFLLHNPQVKKKLYEE 313
Query: 98 VQKVYKEGGGK-VTYEDLAKMTYLEQVISEALRLYPLG-NGLFRECTQD-----YAIPDS 150
+ + G + T D ++ LE I E LRL P+ + + D +A+
Sbjct: 314 IDQNV--GFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVD-- 369
Query: 151 PHVIQKGVLVHIPTYALQTDATLWSDPLEFNPDRFAPEN--ESKIVPGSYVPFGDGPRTC 208
KG V I +AL + W P +F P+RF + SY+PFG GPR+C
Sbjct: 370 -----KGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSC 424
Query: 209 I 209
I
Sbjct: 425 I 425
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 75.7 bits (187), Expect = 3e-16
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 28/168 (16%)
Query: 55 MQEVVSGVFVLIVGGHENSTSTSTNVLH----ELAYNQEVQDKARREVQKVYKEGGGK-V 109
++ + + L G T T++ L L + EV K + E+++V G +
Sbjct: 267 IESLENTAVDLFGAG----TETTSTTLRYALLLLLKHPEVTAKVQEEIERVI--GRNRSP 320
Query: 110 TYEDLAKMTYLEQVISEALR---LYPLGNGLFRECTQD-----YAIPDSPHVIQKGVLVH 161
+D + M Y + V+ E R L P L T D Y IP KG +
Sbjct: 321 CMQDRSHMPYTDAVVHEVQRYIDLLPTS--LPHAVTCDIKFRNYLIP-------KGTTIL 371
Query: 162 IPTYALQTDATLWSDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
I ++ D + +P F+P F E + ++PF G R C+
Sbjct: 372 ISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICV 419
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 74.5 bits (184), Expect = 7e-16
Identities = 44/168 (26%), Positives = 66/168 (39%), Gaps = 28/168 (16%)
Query: 55 MQEVVSGVFVLIVGGHENSTSTSTNVLH----ELAYNQEVQDKARREVQKVYKEGGGK-V 109
M + V L G T T++ L L E+++K E+ +V G +
Sbjct: 265 MDGITVTVADLFFAG----TETTSTTLRYGLLILMKYPEIEEKLHEEIDRVI--GPSRIP 318
Query: 110 TYEDLAKMTYLEQVISEALR---LYPLGNGLFRECTQD-----YAIPDSPHVIQKGVLVH 161
+D +M Y++ V+ E R L P L E T+D Y IP KG +V
Sbjct: 319 AIKDRQEMPYMDAVVHEIQRFITLVPSN--LPHEATRDTIFRGYLIP-------KGTVVV 369
Query: 162 IPTYALQTDATLWSDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
++ D + DP +F P+ F EN + PF G R C
Sbjct: 370 PTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCA 417
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 73.4 bits (181), Expect = 2e-15
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 28/158 (17%)
Query: 65 LIVGGHENSTSTSTNVLH----ELAYNQEVQDKARREVQKVYKEGGGK-VTYEDLAKMTY 119
L +GG T T + L L + EV+ K E+ +V G + +ED AKM Y
Sbjct: 276 LFIGG----TETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVI--GKNRQPKFEDRAKMPY 329
Query: 120 LEQVISEALR---LYPLGNGLFRECTQD-----YAIPDSPHVIQKGVLVHIPTYALQTDA 171
+E VI E R + P+ L R +D + +P KG V+ ++ D
Sbjct: 330 MEAVIHEIQRFGDVIPMS--LARRVKKDTKFRDFFLP-------KGTEVYPMLGSVLRDP 380
Query: 172 TLWSDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+ +S+P +FNP F E ++VPF G R C
Sbjct: 381 SFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCF 418
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 73.0 bits (180), Expect = 2e-15
Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 28/168 (16%)
Query: 55 MQEVVSGVFVLIVGGHENSTSTSTNVLH----ELAYNQEVQDKARREVQKVYKEGGGK-V 109
Q ++ V L G T T++ L + V ++ ++E+++V G +
Sbjct: 266 HQNLILTVLSLFFAG----TETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI--GSHRPP 319
Query: 110 TYEDLAKMTYLEQVISEALR---LYPLGNGLFRECTQD-----YAIPDSPHVIQKGVLVH 161
+D AKM Y + VI E R L P G + T+D Y IP K V
Sbjct: 320 ALDDRAKMPYTDAVIHEIQRLGDLIPFG--VPHTVTKDTQFRGYVIP-------KNTEVF 370
Query: 162 IPTYALQTDATLWSDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+ D + P FNP F N + ++PF G R C+
Sbjct: 371 PVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICL 418
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 48.0 bits (115), Expect = 7e-07
Identities = 32/154 (20%), Positives = 52/154 (33%), Gaps = 30/154 (19%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
EVV VL+V GHE + + L + E D R+
Sbjct: 231 DEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRD--------------PGA- 275
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
+ V+ E LR + + + R +D + I+ G V + + DA +
Sbjct: 276 ----VSGVVEELLRFTSVSDHIVRMAKEDIEVGG--ATIKAGDAVLVSITLMNRDAKAYE 329
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+P F+ R +V FG G C+
Sbjct: 330 NPDIFDARR---------NARHHVGFGHGIHQCL 354
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 46.5 bits (111), Expect = 2e-06
Identities = 27/155 (17%), Positives = 56/155 (36%), Gaps = 22/155 (14%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+++++ + +++ E + T +++ L N E + + L
Sbjct: 257 KDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLAD--------------RSL- 301
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
+ + I+E LR P + R+ +QD + I+K +V A D +
Sbjct: 302 ----VPRAIAETLRYKPPVQLIPRQLSQDTVVGG--MEIKKDTIVFCMIGAANRDPEAFE 355
Query: 176 DPLEFNPDR-FAPENESKIVPGSYVPFGDGPRTCI 209
P FN R + ++ FG G C+
Sbjct: 356 QPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCV 390
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 45.8 bits (109), Expect = 3e-06
Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 31/154 (20%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
E +L+VGG + + + + LA + E + + +
Sbjct: 237 DEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIER--------------PER- 281
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
+ E LR + L R T DY ++KG + +P D +
Sbjct: 282 ----IPAACEELLRRFSLVA-DGRILTSDYEFHG--VQLKKGDQILLPQMLSGLDERENA 334
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
P+ + R S+ FG G C+
Sbjct: 335 CPMHVDFSR---------QKVSHTTFGHGSHLCL 359
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 45.7 bits (109), Expect = 4e-06
Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 30/155 (19%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+E+ + ++I G+E + + +H L + R+ E
Sbjct: 230 EELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKG--------------EVT- 274
Query: 116 KMTYLEQVISEALRLY-PLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
V+ E LR + + R D A+PD I +G + A
Sbjct: 275 ----WADVVEETLRHEPAVKHLPLRYAVTDIALPDG-RTIARGEPILASYAAANRHPDWH 329
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
D F+ R ++ FG G C+
Sbjct: 330 EDADTFDATR---------TVKEHLAFGHGVHFCL 355
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 45.4 bits (108), Expect = 6e-06
Identities = 26/154 (16%), Positives = 53/154 (34%), Gaps = 31/154 (20%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+ + +L++GG + + + + LA + E+ + R D
Sbjct: 243 DKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELR----------------SDPL 286
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
K+ + E R +P+ R +D +++G ++ +PT D
Sbjct: 287 KL---MRGAEEMFRRFPV-VSEARMVAKDQEYKG--VFLKRGDMILLPTALHGLDDAANP 340
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+P + + R S+ FG GP C
Sbjct: 341 EPWKLDFSR---------RSISHSTFGGGPHRCA 365
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 44.9 bits (107), Expect = 6e-06
Identities = 32/154 (20%), Positives = 46/154 (29%), Gaps = 29/154 (18%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
E L+ GG + + V LA + E Q R DL
Sbjct: 222 DEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRER--------------PDL- 266
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
+ E +R YP + R D I+KG LV++P+ D +
Sbjct: 267 ----IPAAADELMRRYPT-VAVSRNAVADVDADG--VTIRKGDLVYLPSVLHNLDPASFE 319
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
P E DR + G G C+
Sbjct: 320 APEEVRFDRGLAPI-------RHTTMGVGAHRCV 346
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 44.9 bits (107), Expect = 7e-06
Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 29/155 (18%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+ V F+L+V G+ + + LA + + + + + +
Sbjct: 228 SDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLK----------------ANPS 271
Query: 116 KMTYLEQVISEALRLY-PLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
Q + E R + + R +D I D +++ + + D ++
Sbjct: 272 LA---PQFVEELCRYHTASALAIKRTAKEDVMIGD--KLVRANEGIIASNQSANRDEEVF 326
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+P EFN +R P P + FG G CI
Sbjct: 327 ENPDEFNMNRKWP-------PQDPLGFGFGDHRCI 354
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 44.5 bits (106), Expect = 9e-06
Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 30/155 (19%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+ + G ++ S T L L ++++ + +L
Sbjct: 221 ELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEK--------------PEL- 265
Query: 116 KMTYLEQVISEALRLY-PLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
+ + E LR+ +GL R T D + D +++KG LV + D +
Sbjct: 266 ----IPAGVEELLRINLSFADGLPRLATADIQVGD--VLVRKGELVLVLLEGANFDPEHF 319
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+P DR P S++ FG G C
Sbjct: 320 PNPGSIELDRPN--------PTSHLAFGRGQHFCP 346
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 43.4 bits (103), Expect = 2e-05
Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 32/156 (20%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
QE++ L+V G+E++T+ + ++ L E++ + +L
Sbjct: 242 QELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDR--------------PEL- 286
Query: 116 KMTYLEQVISEALRLYPL--GNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATL 173
+ + E R PL G R +D + I+ G V T A D
Sbjct: 287 ----IPSAVEELTRWVPLGVGTAFPRYAVEDVTLRG--VTIRAGEPVLASTGAANRDQAQ 340
Query: 174 WSDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+ D + DR P ++ FG G C+
Sbjct: 341 FPDADRIDVDR---------TPNQHLGFGHGVHHCL 367
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 43.4 bits (103), Expect = 2e-05
Identities = 32/154 (20%), Positives = 57/154 (37%), Gaps = 30/154 (19%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+E S +L + GHE + + +N + L + E K R DL
Sbjct: 222 EEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLREN--------------PDL- 266
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
+ + E LR R ++D I I++G V++ A D ++++
Sbjct: 267 ----IGTAVEECLRYESPTQMTARVASEDIDICG--VTIRQGEQVYLLLGAANRDPSIFT 320
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+P F+ R P ++ FG G C+
Sbjct: 321 NPDVFDITR---------SPNPHLSFGHGHHVCL 345
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 43.4 bits (103), Expect = 2e-05
Identities = 30/154 (19%), Positives = 50/154 (32%), Gaps = 28/154 (18%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
E ++ + V GH + + A EV R + E
Sbjct: 221 SEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRND--------------ESA- 265
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
+I+E +R+ P R T+D I +I+ G + A D ++
Sbjct: 266 ----RAAIINEMVRMDPPQLSFLRFPTEDVEIGG--VLIEAGSPIRFMIGAANRDPEVFD 319
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
DP F+ R + + FG GP +C
Sbjct: 320 DPDVFDHTRPPAASR-------NLSFGLGPHSCA 346
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 43.4 bits (103), Expect = 3e-05
Identities = 27/155 (17%), Positives = 45/155 (29%), Gaps = 31/155 (20%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+++ L++ H+ + L + + R + L
Sbjct: 225 MFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLRED--------------PSL- 269
Query: 116 KMTYLEQVISEALRLY-PLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
+ + E LR G R T+D + I KG V A D
Sbjct: 270 ----VGNAVEELLRYLTIGQFGGERVATRDVELGG--VRIAKGEQVVAHVLAADFDPAFV 323
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+P F+ R P ++ FG G CI
Sbjct: 324 EEPERFDITR---------RPAPHLAFGFGAHQCI 349
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 43.0 bits (102), Expect = 3e-05
Identities = 29/154 (18%), Positives = 49/154 (31%), Gaps = 30/154 (19%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
E+++ +L++ GHE + + N + +
Sbjct: 244 DEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAAD--------------GSR- 288
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
VI E +R P + R D I H + KG + + A D T+
Sbjct: 289 ----ASAVIEETMRYDPPVQLVSRYAGDDLTIGT--HTVPKGDTMLLLLAAAHRDPTIVG 342
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
P F+PDR ++ FG G C+
Sbjct: 343 APDRFDPDR---------AQIRHLGFGKGAHFCL 367
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 43.0 bits (102), Expect = 3e-05
Identities = 26/155 (16%), Positives = 48/155 (30%), Gaps = 31/155 (20%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
++++S + + I G E +TS L E+ + R++ DL
Sbjct: 237 EQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKD--------------PDL- 281
Query: 116 KMTYLEQVISEALRLY-PLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
+ + E LR+ + R +D + + V D +
Sbjct: 282 ----MPAAVDELLRVLSVADSIPLRVAAEDIELSG--RTVPADDGVIALLAGANHDPEQF 335
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
DP + R +V FG G C+
Sbjct: 336 DDPERVDFHR---------TDNHHVAFGYGVHQCV 361
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 42.6 bits (101), Expect = 4e-05
Identities = 26/155 (16%), Positives = 48/155 (30%), Gaps = 31/155 (20%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+E+ +++ G +N + + + + E D R + E
Sbjct: 224 EELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGD--------------EQS- 268
Query: 116 KMTYLEQVISEALRLY-PLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
++ + E +R + R +D + I+KG V A D L
Sbjct: 269 ----AQRAVDELIRYLTVPYSPTPRIAREDLTLAG--QEIKKGDSVICSLPAANRDPALA 322
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
D + R P +V FG G C+
Sbjct: 323 PDVDRLDVTR---------EPIPHVAFGHGVHHCL 348
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 42.6 bits (101), Expect = 5e-05
Identities = 28/155 (18%), Positives = 50/155 (32%), Gaps = 31/155 (20%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+VS F+L+ GHE + + + + L + E +
Sbjct: 233 AGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKAN--------------PGR- 277
Query: 116 KMTYLEQVISEALRLY-PLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
+ E LR + R T+D I I+ G V + + D ++
Sbjct: 278 ----TPMAVEELLRYFTIADGVTSRLATEDVEIGG--VSIKAGEGVIVSMLSANWDPAVF 331
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
DP + +R ++ FG GP C+
Sbjct: 332 KDPAVLDVER---------GARHHLAFGFGPHQCL 357
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 42.3 bits (100), Expect = 5e-05
Identities = 32/156 (20%), Positives = 52/156 (33%), Gaps = 34/156 (21%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+V+ +++GG+E + T +H LA + R
Sbjct: 242 DDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDG--------------SAD- 286
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKG--VLVHIPTYALQTDATL 173
++ V+ E LR + R T D I + G V+ +P A D
Sbjct: 287 ----VDTVVEEVLRWTSPAMHVLRVTTADVTING--RDLPSGTPVVAWLP--AANRDPAE 338
Query: 174 WSDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+ DP F P R P ++ FG G C+
Sbjct: 339 FDDPDTFLPGR---------KPNRHITFGHGMHHCL 365
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 42.2 bits (100), Expect = 5e-05
Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 31/155 (20%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+E++S +L++ GHE + S ++ + L + E R + L
Sbjct: 232 EELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD--------------RSL- 276
Query: 116 KMTYLEQVISEALRLY-PLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
+ + E LR R T D + +I+ G V + D T++
Sbjct: 277 ----VPGAVEELLRYLAIADIAGGRVATADIEVEG--QLIRAGEGVIVVNSIANRDGTVY 330
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
DP + R ++ FG G C+
Sbjct: 331 EDPDALDIHR---------SARHHLAFGFGVHQCL 356
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 41.9 bits (99), Expect = 7e-05
Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 31/155 (20%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+E++ +L+V GHE + + N ++ L + + R + L
Sbjct: 251 EELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRAD--------------MTL- 295
Query: 116 KMTYLEQVISEALRLY-PLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
L+ + E LR P+ + +R + + VI G V + +
Sbjct: 296 ----LDGAVEEMLRYEGPVESATYRFPVEPVDLDG--TVIPAGDTVLVVLADAHRTPERF 349
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
DP F+ R ++ FG G CI
Sbjct: 350 PDPHRFDIRR---------DTAGHLAFGHGIHFCI 375
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 41.8 bits (99), Expect = 7e-05
Identities = 36/154 (23%), Positives = 54/154 (35%), Gaps = 30/154 (19%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
E+VS V I GHE S N + L + + D RR DL
Sbjct: 221 NEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRR--------------PDL- 265
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
L Q + E LR P R+ D + +++ +V + A D +
Sbjct: 266 ----LAQAVEECLRYDPSVQSNTRQLDVDVELRG--RRLRRDDVVVVLAGAANRDPRRYD 319
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
P +F+ +R P + FG G R C+
Sbjct: 320 RPDDFDIER---------DPVPSMSFGAGMRYCL 344
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 41.9 bits (99), Expect = 7e-05
Identities = 31/155 (20%), Positives = 53/155 (34%), Gaps = 31/155 (20%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+E+V+ V +I G + + + L + E + + E L
Sbjct: 242 KELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE--------------PGL- 286
Query: 116 KMTYLEQVISEALRLY-PLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
+ + E LR L G R QD I+KG +V + + D T++
Sbjct: 287 ----MRNALDEVLRFDNILRIGTVRFARQDLEYCG--ASIKKGEMVFLLIPSALRDGTVF 340
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
S P F+ R + + +G GP C
Sbjct: 341 SRPDVFDVRR---------DTSASLAYGRGPHVCP 366
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 41.8 bits (99), Expect = 9e-05
Identities = 29/154 (18%), Positives = 46/154 (29%), Gaps = 30/154 (19%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
E+ S VL++ G E S S + L + + RR+
Sbjct: 229 DELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRD--------------PSA- 273
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
L + E LR R ++ I I + V + A D +
Sbjct: 274 ----LPNAVEEILRYIAPPETTTRFAAEEVEIGG--VAIPQYSTVLVANGAANRDPKQFP 327
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
DP F+ R ++ FG G C+
Sbjct: 328 DPHRFDVTR---------DTRGHLSFGQGIHFCM 352
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 41.5 bits (98), Expect = 1e-04
Identities = 26/154 (16%), Positives = 53/154 (34%), Gaps = 31/154 (20%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+ V +L++GG + + ++ L+ + E + RRE
Sbjct: 244 DRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRRE--------------PLK- 288
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
L++ + E R + + + R D ++++G L+ +PT D
Sbjct: 289 ----LQRGVEELFRRFAVVS-DARYVVSDMEFHG--TMLKEGDLILLPTALHGLDDRHHD 341
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
DP+ + R ++ F GP C
Sbjct: 342 DPMTVDLSR---------RDVTHSTFAQGPHRCA 366
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 41.5 bits (98), Expect = 1e-04
Identities = 30/155 (19%), Positives = 47/155 (30%), Gaps = 31/155 (20%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+E+ LI+GG E + L N + +
Sbjct: 233 EELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFES--------------PEK- 277
Query: 116 KMTYLEQVISEALRLY-PLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
E+V++E +R P+ R +D I +I+ G V D L
Sbjct: 278 ----AERVVNELVRYLSPVQAPNPRLAIKDVVIDG--QLIKAGDYVLCSILMANRDEALT 331
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
DP + +R S V FG G C+
Sbjct: 332 PDPDVLDANR---------AAVSDVGFGHGIHYCV 357
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 41.1 bits (97), Expect = 1e-04
Identities = 30/156 (19%), Positives = 50/156 (32%), Gaps = 32/156 (20%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
V L+ G ++ S N + LA + + + A + D+
Sbjct: 229 DRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALAD--------------PDV- 273
Query: 116 KMTYLEQVISEALRLYPLGN--GLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATL 173
+ + + E LR G R ++D I+ G LV D
Sbjct: 274 ----MARAVEEVLRTARAGGSVLPPRYASEDMEFGG--VTIRAGDLVLFDLGLPNFDERA 327
Query: 174 WSDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
++ P EF+ R P ++ FG G CI
Sbjct: 328 FTGPEEFDAAR---------TPNPHLTFGHGIWHCI 354
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 41.1 bits (97), Expect = 1e-04
Identities = 28/155 (18%), Positives = 50/155 (32%), Gaps = 31/155 (20%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+E+V+ +L++ GHE + + N + L + + + + L
Sbjct: 224 EELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAED--------------PSL- 268
Query: 116 KMTYLEQVISEALRLY-PLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
+ + E LR P+ R +D I G +V + A DA
Sbjct: 269 ----ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSG--VTIPAGEMVMLGLAAANRDADWM 322
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+P + R V FG G C+
Sbjct: 323 PEPDRLDITR---------DASGGVFFGHGIHFCL 348
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 40.6 bits (96), Expect = 2e-04
Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 35/155 (22%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
E + + +LI+GG+E +T+ N++ + N ++ D A +
Sbjct: 176 DEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR----------------- 218
Query: 116 KMTYLEQVISEALRLY-PLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
+ E LR Y P+ R +D I + I+KG V + + D T +
Sbjct: 219 -----SGFVEETLRYYSPIQFLPHRFAAEDSYINN--KKIKKGDQVIVYLGSANRDETFF 271
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+P F R ++ FG G C+
Sbjct: 272 DEPDLFKIGR----------REMHLAFGIGIHMCL 296
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 40.6 bits (96), Expect = 2e-04
Identities = 32/154 (20%), Positives = 59/154 (38%), Gaps = 32/154 (20%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
E + + +L++ G+E +T+ +N + + + RE E+L
Sbjct: 197 IEKLGYIILLLIAGNETTTNLISNSVIDFTRFN--LWQRIRE--------------ENL- 239
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
+ I EALR P R+ + + D I++G V + + D ++
Sbjct: 240 ----YLKAIEEALRYSPPVMRTVRKTKERVKLGD--QTIEEGEYVRVWIASANRDEEVFH 293
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
D +F PDR P ++ FG G C+
Sbjct: 294 DGEKFIPDRN---------PNPHLSFGSGIHLCL 318
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 40.3 bits (95), Expect = 2e-04
Identities = 29/154 (18%), Positives = 49/154 (31%), Gaps = 30/154 (19%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+V L+ GHE +T+ + L +++V D+ R +
Sbjct: 242 DGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTT--------------PES- 286
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
+ E +R P + R +D + D H I +G V + D +
Sbjct: 287 ----TPAAVEELMRYDPPVQAVTRWAYEDIRLGD--HDIPRGSRVVALLGSANRDPARFP 340
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
DP + R V FG G C+
Sbjct: 341 DPDVLDVHR---------AAERQVGFGLGIHYCL 365
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 39.9 bits (94), Expect = 3e-04
Identities = 30/154 (19%), Positives = 55/154 (35%), Gaps = 30/154 (19%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
E+V ++++GG E + T + +L N++ D +R+ L
Sbjct: 218 DELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRD--------------PSL- 262
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
L I E LR + R T D + G + + + D ++
Sbjct: 263 ----LPGAIEEMLRWTAPVKNMCRVLTADTEFHG--TALCAGEKMMLLFESANFDEAVFC 316
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+P +F+ R P S++ FG G C+
Sbjct: 317 EPEKFDVQR---------NPNSHLAFGFGTHFCL 341
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 39.5 bits (93), Expect = 4e-04
Identities = 26/154 (16%), Positives = 53/154 (34%), Gaps = 31/154 (20%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+++ +L++GG +N+ ++V LA++ E RR +
Sbjct: 220 DDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIE----LRRRLI------------AHPE 263
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
+ + E LR Y + R TQ+ + D ++ G + D + +
Sbjct: 264 L---IPNAVDELLRFYGPAM-VGRLVTQEVTVGD--ITMKPGQTAMLWFPIASRDRSAFD 317
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
P +R P ++ G G C+
Sbjct: 318 SPDNIVIER---------TPNRHLSLGHGIHRCL 342
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 39.6 bits (93), Expect = 4e-04
Identities = 26/159 (16%), Positives = 47/159 (29%), Gaps = 39/159 (24%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+++ F ++ GG++ T + L + + +D
Sbjct: 238 LSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLL----------------DDPE 281
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
+ + E LRL GL R T+D I D I G V + S
Sbjct: 282 G---IPDAVEELLRLTSPVQGLARTTTRDVTIGD--TTIPAGRRVLL---------LYGS 327
Query: 176 ---DPLEF--NPDRFAPENESKIVPGSYVPFGDGPRTCI 209
D ++ + P + + F G C+
Sbjct: 328 ANRDERQYGPDAAELDVTRC----PRNILTFSHGAHHCL 362
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 39.6 bits (93), Expect = 5e-04
Identities = 24/131 (18%), Positives = 50/131 (38%), Gaps = 24/131 (18%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+E+ S +L+V G+E + + T+ + L+ E +D+ + ++ L
Sbjct: 262 REIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSD-------------FDGL- 307
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKG--VLVHIPTYALQTDATL 173
+ E +R + R TQD + + G V + + D +
Sbjct: 308 ----APTAVEEIVRWASPVVYMRRTLTQDIELRG--TKMAAGDKVSLWYC--SANRDESK 359
Query: 174 WSDPLEFNPDR 184
++DP F+ R
Sbjct: 360 FADPWTFDLAR 370
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 39.6 bits (93), Expect = 5e-04
Identities = 32/156 (20%), Positives = 57/156 (36%), Gaps = 33/156 (21%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+E + V +LIVGG++ + ++ T + L N + K + L
Sbjct: 253 EEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKAN--------------PAL- 297
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKG--VLVHIPTYALQTDATL 173
+E ++ E +R + R D + I+KG V++ + D +
Sbjct: 298 ----VETMVPEIIRWQTPLAHMRRTAIADSELGG--KTIRKGDKVVMWYY--SGNRDDEV 349
Query: 174 WSDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
P EF DR P ++ FG G C+
Sbjct: 350 IDRPEEFIIDRPRPRQ--------HLSFGFGIHRCV 377
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 39.2 bits (92), Expect = 5e-04
Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 28/154 (18%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+E + L++ GH +T N++ L + D A ED
Sbjct: 229 EEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAA----------------EDPG 272
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
+ + ++ E LR P + R T+ + I V+V+ + D+
Sbjct: 273 R---IPAIVEEVLRYRPPFPQMQRTTTKATEVAG--VPIPADVMVNTWVLSANRDSDAHD 327
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
DP F+P R + + FG G C+
Sbjct: 328 DPDRFDPSR--KSGGAA-----QLSFGHGVHFCL 354
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 39.2 bits (92), Expect = 6e-04
Identities = 38/156 (24%), Positives = 57/156 (36%), Gaps = 33/156 (21%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
E V +L +GG T+ S + H L E+ ++ R E ++
Sbjct: 230 SEAVGLAVLLQIGGEA-VTNNSGQMFHLLLSRPELAERLRSE--------------PEI- 273
Query: 116 KMTYLEQVISEALRLYPLGN--GLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATL 173
+ I E LR P N GL R +D I I+ G V++ A D +
Sbjct: 274 ----RPRAIDELLRWIPHRNAVGLSRIALEDVEIKG--VRIRAGDAVYVSYLAANRDPEV 327
Query: 174 WSDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+ DP + +R P +V FG GP C
Sbjct: 328 FPDPDRIDFER---------SPNPHVSFGFGPHYCP 354
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 39.2 bits (92), Expect = 7e-04
Identities = 30/156 (19%), Positives = 48/156 (30%), Gaps = 33/156 (21%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
E V L +GG T +L+ L +E+ + R
Sbjct: 233 TEAVGLAGPLQIGGEA-VTHNVGQMLYLLLTRRELMARMRER--------------PGA- 276
Query: 116 KMTYLEQVISEALRLYPLGN--GLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATL 173
+ E LR GL R +D + I G V++ A D +
Sbjct: 277 ----RGTALDELLRWISHRTSVGLARIALEDVEVHG--TRIAAGEPVYVSYLAANRDPDV 330
Query: 174 WSDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+ DP + DR P ++ +G+G C
Sbjct: 331 FPDPDRIDLDR---------DPNPHLAYGNGHHFCT 357
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 39.1 bits (92), Expect = 7e-04
Identities = 33/156 (21%), Positives = 53/156 (33%), Gaps = 31/156 (19%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
E+VS + +++ GHE + S N + L+ + E + E
Sbjct: 230 AEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSG--------------EAE- 274
Query: 116 KMTYLEQVISEALRLY-PLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
V+ E LR P + L R +D + D VI G + + AL D
Sbjct: 275 ----WSAVVEETLRFSTPTSHVLIRFAAEDVPVGD--RVIPAGDALIVSYGALGRDERAH 328
Query: 175 S-DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
F+ R + ++ FG GP C
Sbjct: 329 GPTADRFDLTRTS--------GNRHISFGHGPHVCP 356
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 38.1 bits (89), Expect = 0.001
Identities = 21/148 (14%), Positives = 48/148 (32%), Gaps = 30/148 (20%)
Query: 62 VFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAKMTYLE 121
+ G E + +T + + ++ + ++ + A +
Sbjct: 216 ALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADD--------------PAAA-----Q 256
Query: 122 QVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWSDPLEFN 181
+ ++E LRL+P + R T + + + HVI +G V + A D ++++P +
Sbjct: 257 RTVAEVLRLHPALHLERRTATAEVRLGE--HVIGEGEEVVVVVAAANRDPEVFAEPDRLD 314
Query: 182 PDRFAPENESKIVPGSYVPFGDGPRTCI 209
DR
Sbjct: 315 VDR---------PDADRALSAHRGHPGR 333
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 37.6 bits (88), Expect = 0.002
Identities = 28/155 (18%), Positives = 53/155 (34%), Gaps = 30/155 (19%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
E+ + V ++V G+E + +++ A + + K + +L
Sbjct: 241 YELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKEN--------------PEL- 285
Query: 116 KMTYLEQVISEALRLY-PLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
Q + E LR L R +D+ + I G V + + D ++
Sbjct: 286 ----APQAVEEVLRWSPTLPVTATRVAAEDFEVNG--VRIPTGTPVFMCAHVAHRDPRVF 339
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+D DRF + + FG GP C+
Sbjct: 340 AD-----ADRFDITVKR---EAPSIAFGGGPHFCL 366
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 37.5 bits (86), Expect = 0.002
Identities = 25/146 (17%), Positives = 36/146 (24%), Gaps = 45/146 (30%)
Query: 87 NQEVQDKARREVQKVYKEGGGKVTYED------LAKMTYLEQVIS----EALRLYPLGNG 136
++V D +T L K YL+ E L P
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK--YLDCRPQDLPREVLTTNPRRLS 331
Query: 137 LFRE------CTQDY-----------AIPDS-----PHVIQK-----GVL---VHIPTYA 166
+ E T D I S P +K V HIPT
Sbjct: 332 IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL 391
Query: 167 LQTDATLWSDPLEFNPDRFAPENESK 192
L +W D ++ + +
Sbjct: 392 LS---LIWFDVIKSDVMVVVNKLHKY 414
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 36.9 bits (86), Expect = 0.003
Identities = 29/156 (18%), Positives = 60/156 (38%), Gaps = 34/156 (21%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+ + + + GH+ ++S+S + L+ N E A+ + L
Sbjct: 255 KYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSD--------------PAL- 299
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKG--VLVHIPTYALQTDATL 173
+ +++ EA+R R D + I++G +++ P + D +
Sbjct: 300 ----IPRLVDEAVRWTAPVKSFMRTALADTEVRG--QNIKRGDRIMLSYP--SANRDEEV 351
Query: 174 WSDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+S+P EF+ RF P ++ FG G C+
Sbjct: 352 FSNPDEFDITRF---------PNRHLGFGWGAHMCL 378
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 36.9 bits (86), Expect = 0.003
Identities = 24/156 (15%), Positives = 54/156 (34%), Gaps = 34/156 (21%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
++ + GH+ ++++S LA + ++ + + + +L
Sbjct: 277 RDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKAD--------------RNL- 321
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKG--VLVHIPTYALQTDATL 173
L ++ EA+R R D + I G ++++ A D
Sbjct: 322 ----LPGIVEEAIRWTTPVQHFMRTAATDTELCG--QKIAAGDWLMLNYV--AANHDPAQ 373
Query: 174 WSDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
+ +P +F+P R ++ FG G C+
Sbjct: 374 FPEPRKFDPTR---------PANRHLAFGAGSHQCL 400
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 36.5 bits (85), Expect = 0.004
Identities = 28/154 (18%), Positives = 48/154 (31%), Gaps = 30/154 (19%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+E V L+ G + + + ++ LA + + R D +
Sbjct: 239 EEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLR----------------ADPS 282
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
EA+R FR T+D + I +G V + + D W
Sbjct: 283 L---ARNAFEEAVRFESPVQTFFRTTTRDVELAG--ATIGEGEKVLMFLGSANRDPRRWD 337
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
DP ++ R +V FG G C+
Sbjct: 338 DPDRYDITR---------KTSGHVGFGSGVHMCV 362
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 36.0 bits (84), Expect = 0.005
Identities = 34/154 (22%), Positives = 53/154 (34%), Gaps = 33/154 (21%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
E +L++ G+E +T+ N + + D R + L
Sbjct: 198 LEKEGYFILLMIAGNETTTNLIGNAIEDFTLY-NSWDYVREKG--------------ALK 242
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLWS 175
+ EALR P R + I D VI +G LV + + D ++
Sbjct: 243 -------AVEEALRFSPPVMRTIRVTKEKVKIRD--QVIDEGELVRVWIASANRDEEVFK 293
Query: 176 DPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
DP F PDR P ++ FG G C+
Sbjct: 294 DPDSFIPDR---------TPNPHLSFGSGIHLCL 318
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 35.7 bits (83), Expect = 0.007
Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 27/131 (20%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
E V +L V G+E + ++ T + A + + + + +
Sbjct: 256 DEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYK----------------KVRP 299
Query: 116 KMTYLEQVISEALRLYPLGNGLFRECTQDYAIPDSPHVIQKG--VLVHIPTYALQTDATL 173
E E +R R +DY + I+KG V++ + D +
Sbjct: 300 -----ETAADEIVRWATPVTAFQRTALRDYELSG--VQIKKGQRVVMFYR--SANFDEEV 350
Query: 174 WSDPLEFNPDR 184
+ DP FN R
Sbjct: 351 FQDPFTFNILR 361
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 35.3 bits (82), Expect = 0.012
Identities = 20/155 (12%), Positives = 40/155 (25%), Gaps = 36/155 (23%)
Query: 56 QEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLA 115
+E+ ++ E + + L + + R + +L
Sbjct: 214 EELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREK--------------PEL- 258
Query: 116 KMTYLEQVISEALRLY-PLGNGLFRECTQDYAIPDSPHVIQKGVLVHIPTYALQTDATLW 174
++ E LR + R D + I G ++ A
Sbjct: 259 ----IDSATEEVLRHASIVEAPAPRVALADVRMAG--RDIHAGDVLTCSMLATNRA---- 308
Query: 175 SDPLEFNPDRFAPENESKIVPGSYVPFGDGPRTCI 209
F+ R +++ FG G CI
Sbjct: 309 -PGDRFDITR---------EKATHMAFGHGIHHCI 333
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 31.9 bits (72), Expect = 0.18
Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 27/78 (34%)
Query: 43 NINSPNFLGVIRMQEVVSGVFVLIVGGHENSTSTSTNVLHELAYNQEVQDKARR-EVQKV 101
N N N Q V +G + T TNVL+ + K ++ ++ ++
Sbjct: 1845 NYNVEN------QQYVAAG--------DLRALDTVTNVLNFI--------KLQKIDIIEL 1882
Query: 102 YKEGGGKVTYEDLAKMTY 119
K ++ E++ +
Sbjct: 1883 QK----SLSLEEVEGHLF 1896
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle,
myosin subfragment 2, heavy meromyosin, essential light
chain; 20.00A {Avicularia avicularia}
Length = 196
Score = 28.8 bits (65), Expect = 1.1
Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 7/47 (14%)
Query: 97 EVQKVYKEGGGKVTYEDLAKM-------TYLEQVISEALRLYPLGNG 136
E+ + E G + + + T E VI A L+ G+G
Sbjct: 94 ELDSMVAEAPGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGDG 140
>3vjj_A P9-1; 3.00A {Rice black streaked dwarf virus}
Length = 368
Score = 28.7 bits (63), Expect = 1.5
Identities = 8/55 (14%), Positives = 23/55 (41%)
Query: 16 FTTTTTTTTTTTNNNNNNNNNNNNNKNNINSPNFLGVIRMQEVVSGVFVLIVGGH 70
F + T N+ N N N++ +++ N + + + + + + ++ G
Sbjct: 30 FGSYKIEELTIKNDQPNRNTNSSTSQSTENRLSTKKIPLLDDGIFELLNYLIDGT 84
>4dfk_A DNA polymerase I, thermostable; DNA polymerase, transferase-DNA
complex; HET: DNA DOC 0L5; 1.65A {Thermus aquaticus}
PDB: 1jxe_A* 3ktq_A* 3lwl_A* 3lwm_A* 3m8s_A* 3m8r_A*
3oju_A* 3rr7_A* 3rr8_A* 3rrg_A* 3ojs_A* 3t3f_A* 4df4_A*
4df8_A* 4dfj_A* 3rrh_A* 4dfm_A* 4dfp_A* 1ktq_A* 5ktq_A*
...
Length = 540
Score = 28.3 bits (64), Expect = 2.1
Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 23/84 (27%)
Query: 43 NINSPNFLGVI---RMQEVVSGVFVLIVGGHENST---STSTNVLHELAYNQEVQDK--A 94
N+NS + L + + L G T STS VL L + +K
Sbjct: 191 NLNSRDQLERVLFDELG--------LPAIGKTEKTGKRSTSAAVLEALREAHPIVEKILQ 242
Query: 95 RREVQKVYKEGGGKVTYED-LAKM 117
RE+ K+ K TY D L +
Sbjct: 243 YRELTKL------KSTYIDPLPDL 260
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid
dehydrogenase complex...; cubic core, HOMO trimer,
oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus}
PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Length = 262
Score = 28.0 bits (63), Expect = 2.5
Identities = 9/41 (21%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Query: 95 RREVQKVYKEGGGKVTYEDLAKMTYLEQVISEALRLYPLGN 135
R E++ + G K+++ M + + S L +P+ N
Sbjct: 71 REELKPIAFARGIKLSF-----MPFFLKAASLGLLQFPILN 106
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation,
ATP-binding, cytoplasm, mitochondrion,
nucleotide-binding, nucleus; 2.95A {Saccharomyces
cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Length = 409
Score = 27.7 bits (62), Expect = 3.2
Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 13/57 (22%)
Query: 65 LIVGGHENSTSTSTN-----VLHELAYNQEVQDKARREVQKVYKEGGGKVTYEDLAK 116
++VGG T+ + ++ + + K R+ + + V Y L K
Sbjct: 95 IVVGG--------THYYLQTLFNKRVDTKSSERKLTRKQLDILESTDPDVIYNTLVK 143
>1ytv_M V1AR, vasopressin V1A receptor; GPCR, fusion protein, maltose-
binding protein, sugar binding protein, hormone
receptor; HET: MAL; 1.80A {Homo sapiens}
Length = 84
Score = 25.2 bits (54), Expect = 7.4
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 25 TTTNNNNNNNNNNNNNKNNI 44
+++NNNNNNNNNN + N+
Sbjct: 2 SSSNNNNNNNNNNLGIEENL 21
Score = 25.2 bits (54), Expect = 8.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 28 NNNNNNNNNNNNNKNNINSPNFL 50
N+++NNNNNNNNN I +
Sbjct: 1 NSSSNNNNNNNNNNLGIEENLYF 23
>3tia_A Neuraminidase; 6-bladed beta-propeller, calcium binding,
glycosylation, ANT hydrolase-hydrolase inhibitor
complex; HET: NAG BMA MAN LNV; 1.80A {Influenza a virus}
PDB: 3tib_A* 3tic_A* 2bat_A* 1ivd_A* 1inh_A* 1inw_A*
1inx_A* 1ivc_A* 1ing_A* 1ive_A* 1ivf_A* 1ivg_A* 1nn2_A*
2aep_A* 2aeq_A*
Length = 469
Score = 26.5 bits (58), Expect = 7.6
Identities = 4/49 (8%), Positives = 9/49 (18%)
Query: 17 TTTTTTTTTTTNNNNNNNNNNNNNKNNINSPNFLGVIRMQEVVSGVFVL 65
NN + + + Q ++G
Sbjct: 52 PCEPIIIERNITEIVYLNNTTIEKEICPKVVEYRNWSKPQCQITGFAPF 100
>3tg7_A Hexon protein, late protein 2; adenovirus structural protein, with
NEW finding featuring PO binding to human coagulation
factor X; 1.57A {Human adenovirus 5} PDB: 2bvi_F 1p30_A
1vsz_A 3iyn_A 1p2z_A* 2obe_A
Length = 951
Score = 26.5 bits (58), Expect = 7.7
Identities = 8/34 (23%), Positives = 11/34 (32%)
Query: 15 FFTTTTTTTTTTTNNNNNNNNNNNNNKNNINSPN 48
T T T N + ++KN I N
Sbjct: 422 TETLTKVKPKTGQENGWEKDATEFSDKNEIRVGN 455
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform;
phosphorylation, 2D crystalline arrays, myosin
regulation, M light chains, structural protein; 20.00A
{Gallus gallus}
Length = 143
Score = 25.9 bits (58), Expect = 8.1
Identities = 9/48 (18%), Positives = 16/48 (33%), Gaps = 8/48 (16%)
Query: 97 EVQKVYKEGGGKVTYEDLAKM-------TYLEQVISEALRLY-PLGNG 136
++ + E G + + M T E VI A + +G
Sbjct: 44 YLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASG 91
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.135 0.397
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,244,545
Number of extensions: 182876
Number of successful extensions: 695
Number of sequences better than 10.0: 1
Number of HSP's gapped: 591
Number of HSP's successfully gapped: 99
Length of query: 217
Length of database: 6,701,793
Length adjustment: 90
Effective length of query: 127
Effective length of database: 4,188,903
Effective search space: 531990681
Effective search space used: 531990681
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (24.9 bits)