BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14279
(73 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7KRI2|LOLAL_DROME Longitudinals lacking protein-like OS=Drosophila melanogaster
GN=lolal PE=1 SV=1
Length = 127
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Query: 18 VIMDKTFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAEAPQSSVKREG 73
++ D ++ HL ILEFMYAGEVNVSQ+QLP+FLKTADRLK+KGLAE P SS+KREG
Sbjct: 73 ILKDVSYIHLQAILEFMYAGEVNVSQEQLPAFLKTADRLKVKGLAETP-SSIKREG 127
>sp|Q9W0K4|BAB2_DROME Protein bric-a-brac 2 OS=Drosophila melanogaster GN=bab2 PE=1 SV=2
Length = 1067
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 11/75 (14%)
Query: 8 CHQFLEALFY---------VIMDKTFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKI 58
C + +ALFY ++ D ++ L ++EFMY GE+NV QDQ+ LK A+ LKI
Sbjct: 244 CSPYFQALFYDNPCQHPIIIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKI 303
Query: 59 KGLAEAPQSSVKREG 73
+GLAE S+ + EG
Sbjct: 304 RGLAEV--SAGRGEG 316
>sp|Q7KQZ4|LOLA3_DROME Longitudinals lacking protein, isoforms A/B/D/L OS=Drosophila
melanogaster GN=lola PE=1 SV=1
Length = 787
Score = 53.9 bits (128), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 39/54 (72%)
Query: 10 QFLEALFYVIMDKTFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAE 63
Q+ + +++ D ++ L ++++MY GEVN+SQDQL + LK A+ L+IKGL++
Sbjct: 64 QYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD 117
>sp|Q9V5M6|LOLA5_DROME Longitudinals lacking protein, isoforms J/P/Q/S/Z OS=Drosophila
melanogaster GN=lola PE=1 SV=4
Length = 963
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 39/54 (72%)
Query: 10 QFLEALFYVIMDKTFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAE 63
Q+ + +++ D ++ L ++++MY GEVN+SQDQL + LK A+ L+IKGL++
Sbjct: 64 QYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD 117
>sp|P42283|LOLA1_DROME Longitudinals lacking protein, isoform G OS=Drosophila melanogaster
GN=lola PE=1 SV=2
Length = 891
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 39/54 (72%)
Query: 10 QFLEALFYVIMDKTFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAE 63
Q+ + +++ D ++ L ++++MY GEVN+SQDQL + LK A+ L+IKGL++
Sbjct: 64 QYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD 117
>sp|Q86B87|MMD4_DROME Modifier of mdg4 OS=Drosophila melanogaster GN=mod(mdg4) PE=1 SV=1
Length = 610
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 27 LTDILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAE 63
L D+++FMY GEVNV QD LP+F+ TA+ L+IKGL +
Sbjct: 82 LKDLIQFMYCGEVNVKQDALPAFISTAESLQIKGLTD 118
>sp|Q9V5M3|LOLA6_DROME Longitudinals lacking protein, isoforms N/O/W/X/Y OS=Drosophila
melanogaster GN=lola PE=1 SV=3
Length = 878
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 39/54 (72%)
Query: 10 QFLEALFYVIMDKTFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAE 63
Q+ + +++ D ++ L ++++MY GEVN+SQDQL + LK A+ L+IKGL++
Sbjct: 64 QYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD 117
>sp|P42284|LOLA2_DROME Longitudinals lacking protein, isoforms H/M/V OS=Drosophila
melanogaster GN=lola PE=1 SV=2
Length = 549
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 39/54 (72%)
Query: 10 QFLEALFYVIMDKTFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAE 63
Q+ + +++ D ++ L ++++MY GEVN+SQDQL + LK A+ L+IKGL++
Sbjct: 64 QYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD 117
>sp|Q24174|ABRU_DROME Protein abrupt OS=Drosophila melanogaster GN=ab PE=1 SV=2
Length = 904
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 18 VIMDKTFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAE 63
++ D + ++L FMY GEVNVS +QLP FLKTA L+I+GLA+
Sbjct: 143 ILRDVRCDDVENLLSFMYNGEVNVSHEQLPDFLKTAHLLQIRGLAD 188
>sp|Q867Z4|LOLA4_DROME Longitudinals lacking protein, isoforms F/I/K/T OS=Drosophila
melanogaster GN=lola PE=1 SV=1
Length = 970
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 39/54 (72%)
Query: 10 QFLEALFYVIMDKTFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAE 63
Q+ + +++ D ++ L ++++MY GEVN+SQDQL + LK A+ L+IKGL++
Sbjct: 64 QYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD 117
>sp|Q8IN81|FRU_DROME Sex determination protein fruitless OS=Drosophila melanogaster
GN=fru PE=1 SV=1
Length = 955
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 8 CHQFLEALFY---------VIMDKTFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKI 58
C + E +F + D + + +L+FMY GEVNV Q LP FLKTA+ L++
Sbjct: 152 CSPYFETIFLQNQHPHPIIYLKDVRYSEMRSLLDFMYKGEVNVGQSSLPMFLKTAESLQV 211
Query: 59 KGLAE 63
+GL +
Sbjct: 212 RGLTD 216
>sp|Q9W0K7|BAB1_DROME Protein bric-a-brac 1 OS=Drosophila melanogaster GN=bab1 PE=2 SV=2
Length = 977
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 18 VIMDKTFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAE 63
++ D + L I+EFMY GE+NVSQDQ+ L+ A+ LK++GLA+
Sbjct: 167 IMRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLAD 212
>sp|P17789|TTKB_DROME Protein tramtrack, beta isoform OS=Drosophila melanogaster GN=ttk
PE=1 SV=2
Length = 643
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 18 VIMDKTFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAE 63
++ D + + +L+FMY GEV+V Q++L +FL+ A+ L+IKGL E
Sbjct: 73 ILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTE 118
>sp|P42282|TTKA_DROME Protein tramtrack, alpha isoform OS=Drosophila melanogaster GN=ttk
PE=1 SV=3
Length = 813
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 9/65 (13%)
Query: 8 CHQFLEALFY---------VIMDKTFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKI 58
C + LF ++ D + + +L+FMY GEV+V Q++L +FL+ A+ L+I
Sbjct: 54 CSPYFNTLFVSHPEKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRI 113
Query: 59 KGLAE 63
KGL E
Sbjct: 114 KGLTE 118
>sp|Q01295|BRC1_DROME Broad-complex core protein isoforms 1/2/3/4/5 OS=Drosophila
melanogaster GN=br PE=1 SV=2
Length = 727
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 18 VIMDKTFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAE 63
++ D F L ++EF+Y GEVNV Q L SFLKTA+ L++ GL +
Sbjct: 72 LLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQ 117
>sp|Q24206|BRC4_DROME Broad-complex core protein isoform 6 OS=Drosophila melanogaster
GN=br PE=1 SV=2
Length = 880
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 18 VIMDKTFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAE 63
++ D F L ++EF+Y GEVNV Q L SFLKTA+ L++ GL +
Sbjct: 72 LLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQ 117
>sp|Q08605|GAGA_DROME Transcription factor GAGA OS=Drosophila melanogaster GN=Trl PE=1
SV=2
Length = 581
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 27 LTDILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAEAPQSSVK 70
L +LEF+Y GEV+V QLPS L+ A L I+GL APQ+ K
Sbjct: 83 LEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGL--APQTVTK 124
>sp|P14083|TKR_DROME Protein TKR OS=Drosophila melanogaster GN=Tkr PE=2 SV=2
Length = 1046
Score = 37.7 bits (86), Expect = 0.018, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 8 CHQFLEALFY-------VIMDKTFKH--LTDILEFMYAGEVNVSQDQLPSFLKTADRLKI 58
C F + +F VI+ K F+ + I++FMY GE++V Q +L + ++ + L++
Sbjct: 161 CSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQV 220
Query: 59 KGLAEA 64
+GL E+
Sbjct: 221 RGLVES 226
>sp|Q6NYM1|KLH21_DANRE Kelch-like protein 21 OS=Danio rerio GN=klhl21 PE=2 SV=1
Length = 613
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 3 SSEQFCHQFLEALFYVIMDKTFKH------LTDILEFMYAGEVNVSQDQLPSFLKTADRL 56
+S F F L +MD+ H L +++F Y G V V+ D + LKTAD
Sbjct: 59 ASMYFRAMFAGTLRESVMDRVVLHEVSAELLGLLVDFCYTGRVTVTHDNVDLLLKTADLF 118
Query: 57 KIKGLAEA 64
+ + EA
Sbjct: 119 QFPSVKEA 126
>sp|Q9NXS3|KLH28_HUMAN Kelch-like protein 28 OS=Homo sapiens GN=KLHL28 PE=2 SV=2
Length = 571
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 27 LTDILEFMYAGEVNVSQDQLPSFLKTADRLKIK 59
L I+E+ Y G V +SQD + S L A+ L+IK
Sbjct: 86 LQAIVEYAYTGTVFISQDTVESLLPAANLLQIK 118
>sp|Q9CR40|KLH28_MOUSE Kelch-like protein 28 OS=Mus musculus GN=Klhl28 PE=2 SV=1
Length = 571
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 27 LTDILEFMYAGEVNVSQDQLPSFLKTADRLKIK 59
L I+E+ Y G V +SQD + S L A+ L+IK
Sbjct: 86 LQAIVEYAYTGTVFISQDTVESLLPAANLLQIK 118
>sp|Q8BGW6|ST32A_MOUSE Serine/threonine-protein kinase 32A OS=Mus musculus GN=Stk32a PE=2
SV=1
Length = 398
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 21 DKTFKHLTDILEFMYAGEVN---VSQDQL-PSFLKTADRL 56
D+ F HLTDI F Y ++N V Q +L P F+ T RL
Sbjct: 266 DQRFSHLTDIQNFPYMSDMNWDAVLQKRLIPGFIPTKGRL 305
>sp|Q8CP25|END4_STAES Probable endonuclease 4 OS=Staphylococcus epidermidis (strain ATCC
12228) GN=nfo PE=3 SV=1
Length = 296
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 7 FCHQFLEALFYVIMDKTFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLK 57
F H +AL YV+ TFK++ ILE Y GE +++ P + D LK
Sbjct: 233 FGHIGFDALNYVVHHDTFKNIPKILETPYVGEDK--KNKKPPYKLEIDMLK 281
>sp|Q5HNZ1|END4_STAEQ Probable endonuclease 4 OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=nfo PE=3 SV=1
Length = 296
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 7 FCHQFLEALFYVIMDKTFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLK 57
F H +AL YV+ TFK++ ILE Y GE +++ P + D LK
Sbjct: 233 FGHIGFDALNYVVHHDTFKNIPKILETPYVGEDK--KNKKPPYKLEIDMLK 281
>sp|D4A2K4|KLH21_RAT Kelch-like protein 21 OS=Rattus norvegicus GN=Klhl21 PE=3 SV=1
Length = 597
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 30 ILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAEA 64
+L+F Y G V VS D L+ AD L+ + EA
Sbjct: 90 LLDFSYTGRVAVSGDNAEPLLRAADLLQFPAVKEA 124
>sp|Q3U410|KLH21_MOUSE Kelch-like protein 21 OS=Mus musculus GN=Klhl21 PE=2 SV=1
Length = 597
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 30 ILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAEA 64
+L+F Y G V VS D L+ AD L+ + EA
Sbjct: 90 LLDFSYTGRVAVSGDNAEPLLRAADLLQFPAVKEA 124
>sp|Q9UJP4|KLH21_HUMAN Kelch-like protein 21 OS=Homo sapiens GN=KLHL21 PE=1 SV=4
Length = 597
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 30 ILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAEA 64
+L+F Y G V VS D L+ AD L+ + EA
Sbjct: 90 LLDFSYTGRVAVSGDNAEPLLRAADLLQFPAVKEA 124
>sp|Q08DS0|KLH21_BOVIN Kelch-like protein 21 OS=Bos taurus GN=KLHL21 PE=2 SV=1
Length = 597
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 30 ILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAEA 64
+L+F Y G V VS D L+ AD L+ + EA
Sbjct: 90 LLDFSYTGRVAVSGDNAEPLLRAADLLQFPAVKEA 124
>sp|Q4VBD9|GZF1_MOUSE GDNF-inducible zinc finger protein 1 OS=Mus musculus GN=Gzf1 PE=1
SV=2
Length = 706
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 31 LEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAE 63
LEF+Y +V V +D++ L+ A++LK L+E
Sbjct: 91 LEFVYTAKVRVEEDRVQQMLEVAEKLKCLDLSE 123
>sp|D3ZUU2|GZF1_RAT GDNF-inducible zinc finger protein 1 OS=Rattus norvegicus GN=Gzf1
PE=3 SV=1
Length = 707
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 31 LEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAE 63
LEF+Y V V +D++ L+ A++LK L+E
Sbjct: 91 LEFVYTARVRVKEDRVQQMLEVAEKLKCLDLSE 123
>sp|Q9H116|GZF1_HUMAN GDNF-inducible zinc finger protein 1 OS=Homo sapiens GN=GZF1 PE=1
SV=1
Length = 711
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 31 LEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAEA 64
LEF+Y +V V +D++ L+ A++LK L+E
Sbjct: 91 LEFVYTAKVQVEEDRVQRMLEVAEKLKCLDLSET 124
>sp|Q9SE95|FIP2_ARATH FH protein interacting protein FIP2 OS=Arabidopsis thaliana GN=FIP2
PE=1 SV=1
Length = 298
Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 17 YVIMDKTFKHLTDILEFMYAGEV-NVSQDQLPSFLKTADRLKIKGLAEAPQSSVKREG 73
YV +D+ KH IL ++ G + ++S L+ AD ++ GL + + S K G
Sbjct: 54 YVFIDRDGKHFRHILNWLRDGVIPSLSDPDCSELLREADYYQLLGLKDGIKDSRKEVG 111
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,353,261
Number of Sequences: 539616
Number of extensions: 667304
Number of successful extensions: 2476
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2445
Number of HSP's gapped (non-prelim): 39
length of query: 73
length of database: 191,569,459
effective HSP length: 45
effective length of query: 28
effective length of database: 167,286,739
effective search space: 4684028692
effective search space used: 4684028692
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)