BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14280
(1891 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|156537119|ref|XP_001603129.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 1 [Nasonia
vitripennis]
Length = 1739
Score = 1177 bits (3046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/1258 (49%), Positives = 810/1258 (64%), Gaps = 124/1258 (9%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE ++EYQIPEFDNLYLDMNGIIHNCSHPND D FRITE+ I
Sbjct: 1 MGVPKFFRYISERYPCLSEKLKEYQIPEFDNLYLDMNGIIHNCSHPNDADATFRITEETI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F++IFHYIEILFR+IQP+KLFFMA+DGVAPRAK+NQQRGRRFR+AKEAEVLE KA+ KG+
Sbjct: 61 FKNIFHYIEILFRIIQPQKLFFMAVDGVAPRAKINQQRGRRFRAAKEAEVLEAKARAKGQ 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+P E RFD C FM +K+N+Q
Sbjct: 121 EIPKEARFD----SNCITPGTVFM--------SKLNEQ---------------------- 146
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILS 239
L+YF+ KI+TDKLW+ C +ILS
Sbjct: 147 ---------------------------LKYFITYKISTDKLWQK----------CKIILS 169
Query: 240 GHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK 299
G E PGEGEHKIMDYIRYMK++PDY N RHCLYGLDADLIMLGLC+HEP+FSLLREEVK
Sbjct: 170 GSEVPGEGEHKIMDYIRYMKAQPDYEGNTRHCLYGLDADLIMLGLCSHEPHFSLLREEVK 229
Query: 300 FNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVL 359
F K I+TPEET F LLHLSLMR+YLE EF +K+ L+F F IE IIDDWVL
Sbjct: 230 FGKTQKK----ILTPEETNFCLLHLSLMREYLEHEFSPVKDK--LTFKFDIEKIIDDWVL 283
Query: 360 MGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
MGFL+GNDFIP+LP+LHI NGALPLLY Y +VLPTLDGYINE G LNL+RFEKF+ KL
Sbjct: 284 MGFLVGNDFIPHLPNLHIENGALPLLYNAYMDVLPTLDGYINEAGTLNLERFEKFMEKLG 343
Query: 420 SFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKS--------KEMDPDLAALIKATDDDY 471
+D EQF E YAD+++ E K G++ ++ K+ K+ + L ALI AT+++
Sbjct: 344 KYDLEQFDEIYADLKFFEAKTGRRLNESERNSKNSPDENASPKKTNKALNALIMATENEL 403
Query: 472 DDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAE 531
++E L SD D E + EF QHK DYY K++YA V E +R QAE
Sbjct: 404 GADSDEDLEGE-------SDSDTEMQL----EFVQHKRDYYMNKMEYANVDAETMRSQAE 452
Query: 532 CYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAV 591
YIRAIQWNLHYYYNGC SWSWYYPHHYAP+ISDIK+F L L++++GEPF PF+QLLAV
Sbjct: 453 GYIRAIQWNLHYYYNGCCSWSWYYPHHYAPFISDIKNFKDLKLEFDLGEPFKPFEQLLAV 512
Query: 592 LPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKA 651
LPAASK LLP Y LMT E SPI++YYP +F TDLNGKKQ+WEAVVLIP IDE L+KA
Sbjct: 513 LPAASKSLLPTAYHGLMTEEKSPIIKYYPLDFKTDLNGKKQEWEAVVLIPLIDEKSLLKA 572
Query: 652 MDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYV 711
M LT EER RN HGPM ++T+ G AP+YFP+I ++A + RDDI V
Sbjct: 573 MKPCNAKLTPEERKRNSHGPMSIFTFIEKEQGIYEAPEYFPSI-RSYAQMMLVNRDDILV 631
Query: 712 HPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQV 771
+L KGLC+ V L +Y FPTL+H+ T + AKVKVF+QPSR E++I+ ++
Sbjct: 632 PLERLVKGLCKGVQLSVYYPGFPTLQHIPHTACLAKAKVKVFEQPSRRENMILTVLPKEL 691
Query: 772 PSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISF---------DKNSGPVFERAA 822
P + +A + LGKT+FI +PHL+E V VA ++IS D N E
Sbjct: 692 PPIDDLARKWLGKTVFIAWPHLVEALVVEVANSKTKISITYPQPKHATDGNHNFNTESMN 751
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
+ F + +KSIT+ Y T+LG+D+GN E+L++ P+ R+Y + +GK+T ++ +
Sbjct: 752 DMLLSTFNVQRKSITENYKTRLGIDVGNIEILIHAAPIMGRQYVYSAQGKMTLEKQWSDV 811
Query: 883 TVTYAYQSAVLNLQ-QARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVI-STVKEENS 940
YAYQ + ++ + +++ +I ++F P CF L +PHYG+ G V V ++S
Sbjct: 812 PQAYAYQVVLKDISIHNHDFIQFTSITDVFKPKSVCFMLGHPHYGAMGEVTEGGVDLKSS 871
Query: 941 FIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEE 1000
+K++ +V EP+ + LQ DT Y+P A +L IS LLSR TG++F+I+ E
Sbjct: 872 RVKVAMRVTSEPNFDRVRQLQADTRMRYMPGNIAAQRLGISSHLLSRITGTVFVING--E 929
Query: 1001 G-----AKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFG 1055
G A ++N+GLN+KF++KNEEV G+T++D W Y+ + V +K+Y+++FPE+F
Sbjct: 930 GVDPAHASKYNLGLNLKFNKKNEEVPGYTKKD-INGTWLYSVKAVDFVKSYIQKFPELFE 988
Query: 1056 FLK-DHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHA-KAEVRPCGAAVVDAKVVSLI 1113
L+ + S D++LR+ +FP+ G + V VSWLKEQ A R CG ++ +VV I
Sbjct: 989 RLEMNLVSSDMFLREHLFPNTGAEGVDATVSWLKEQQKARGTTTRTCGTEELETEVVQAI 1048
Query: 1114 EHAVDTCEKVEKQ----ITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTV 1169
E VD + ++Q + + VKP+ LY P + PDP + + FDR+V +RD +TV
Sbjct: 1049 EKDVDASLEAQRQAGKSVLMQVKPHLLYKPGLNSGSVPPDPKAQHRFFDRIVCVRDSFTV 1108
Query: 1170 PLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIR-CSESRGYRMPAQAMINLSYG 1226
PLGY+GTIIG+ + E MY+V+FD F G+ + CS +R YR+ A IN+SYG
Sbjct: 1109 PLGYKGTIIGVQKNENPLLTMYEVLFDIAFAGGLVMHGCSSNRSYRLAATDFINISYG 1166
>gi|345479163|ref|XP_003423891.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 2 [Nasonia
vitripennis]
Length = 1682
Score = 1177 bits (3045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/1258 (49%), Positives = 810/1258 (64%), Gaps = 124/1258 (9%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE ++EYQIPEFDNLYLDMNGIIHNCSHPND D FRITE+ I
Sbjct: 1 MGVPKFFRYISERYPCLSEKLKEYQIPEFDNLYLDMNGIIHNCSHPNDADATFRITEETI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F++IFHYIEILFR+IQP+KLFFMA+DGVAPRAK+NQQRGRRFR+AKEAEVLE KA+ KG+
Sbjct: 61 FKNIFHYIEILFRIIQPQKLFFMAVDGVAPRAKINQQRGRRFRAAKEAEVLEAKARAKGQ 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+P E RFD C FM +K+N+Q
Sbjct: 121 EIPKEARFD----SNCITPGTVFM--------SKLNEQ---------------------- 146
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILS 239
L+YF+ KI+TDKLW+ C +ILS
Sbjct: 147 ---------------------------LKYFITYKISTDKLWQK----------CKIILS 169
Query: 240 GHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK 299
G E PGEGEHKIMDYIRYMK++PDY N RHCLYGLDADLIMLGLC+HEP+FSLLREEVK
Sbjct: 170 GSEVPGEGEHKIMDYIRYMKAQPDYEGNTRHCLYGLDADLIMLGLCSHEPHFSLLREEVK 229
Query: 300 FNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVL 359
F K I+TPEET F LLHLSLMR+YLE EF +K+ L+F F IE IIDDWVL
Sbjct: 230 FGKTQKK----ILTPEETNFCLLHLSLMREYLEHEFSPVKDK--LTFKFDIEKIIDDWVL 283
Query: 360 MGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
MGFL+GNDFIP+LP+LHI NGALPLLY Y +VLPTLDGYINE G LNL+RFEKF+ KL
Sbjct: 284 MGFLVGNDFIPHLPNLHIENGALPLLYNAYMDVLPTLDGYINEAGTLNLERFEKFMEKLG 343
Query: 420 SFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKS--------KEMDPDLAALIKATDDDY 471
+D EQF E YAD+++ E K G++ ++ K+ K+ + L ALI AT+++
Sbjct: 344 KYDLEQFDEIYADLKFFEAKTGRRLNESERNSKNSPDENASPKKTNKALNALIMATENEL 403
Query: 472 DDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAE 531
++E L SD D E + EF QHK DYY K++YA V E +R QAE
Sbjct: 404 GADSDEDLEGE-------SDSDTEMQL----EFVQHKRDYYMNKMEYANVDAETMRSQAE 452
Query: 532 CYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAV 591
YIRAIQWNLHYYYNGC SWSWYYPHHYAP+ISDIK+F L L++++GEPF PF+QLLAV
Sbjct: 453 GYIRAIQWNLHYYYNGCCSWSWYYPHHYAPFISDIKNFKDLKLEFDLGEPFKPFEQLLAV 512
Query: 592 LPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKA 651
LPAASK LLP Y LMT E SPI++YYP +F TDLNGKKQ+WEAVVLIP IDE L+KA
Sbjct: 513 LPAASKSLLPTAYHGLMTEEKSPIIKYYPLDFKTDLNGKKQEWEAVVLIPLIDEKSLLKA 572
Query: 652 MDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYV 711
M LT EER RN HGPM ++T+ G AP+YFP+I ++A + RDDI V
Sbjct: 573 MKPCNAKLTPEERKRNSHGPMSIFTFIEKEQGIYEAPEYFPSI-RSYAQMMLVNRDDILV 631
Query: 712 HPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQV 771
+L KGLC+ V L +Y FPTL+H+ T + AKVKVF+QPSR E++I+ ++
Sbjct: 632 PLERLVKGLCKGVQLSVYYPGFPTLQHIPHTACLAKAKVKVFEQPSRRENMILTVLPKEL 691
Query: 772 PSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISF---------DKNSGPVFERAA 822
P + +A + LGKT+FI +PHL+E V VA ++IS D N E
Sbjct: 692 PPIDDLARKWLGKTVFIAWPHLVEALVVEVANSKTKISITYPQPKHATDGNHNFNTESMN 751
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
+ F + +KSIT+ Y T+LG+D+GN E+L++ P+ R+Y + +GK+T ++ +
Sbjct: 752 DMLLSTFNVQRKSITENYKTRLGIDVGNIEILIHAAPIMGRQYVYSAQGKMTLEKQWSDV 811
Query: 883 TVTYAYQSAVLNLQ-QARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVI-STVKEENS 940
YAYQ + ++ + +++ +I ++F P CF L +PHYG+ G V V ++S
Sbjct: 812 PQAYAYQVVLKDISIHNHDFIQFTSITDVFKPKSVCFMLGHPHYGAMGEVTEGGVDLKSS 871
Query: 941 FIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEE 1000
+K++ +V EP+ + LQ DT Y+P A +L IS LLSR TG++F+I+ E
Sbjct: 872 RVKVAMRVTSEPNFDRVRQLQADTRMRYMPGNIAAQRLGISSHLLSRITGTVFVING--E 929
Query: 1001 G-----AKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFG 1055
G A ++N+GLN+KF++KNEEV G+T++D W Y+ + V +K+Y+++FPE+F
Sbjct: 930 GVDPAHASKYNLGLNLKFNKKNEEVPGYTKKD-INGTWLYSVKAVDFVKSYIQKFPELFE 988
Query: 1056 FLK-DHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHA-KAEVRPCGAAVVDAKVVSLI 1113
L+ + S D++LR+ +FP+ G + V VSWLKEQ A R CG ++ +VV I
Sbjct: 989 RLEMNLVSSDMFLREHLFPNTGAEGVDATVSWLKEQQKARGTTTRTCGTEELETEVVQAI 1048
Query: 1114 EHAVDTCEKVEKQ----ITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTV 1169
E VD + ++Q + + VKP+ LY P + PDP + + FDR+V +RD +TV
Sbjct: 1049 EKDVDASLEAQRQAGKSVLMQVKPHLLYKPGLNSGSVPPDPKAQHRFFDRIVCVRDSFTV 1108
Query: 1170 PLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIR-CSESRGYRMPAQAMINLSYG 1226
PLGY+GTIIG+ + E MY+V+FD F G+ + CS +R YR+ A IN+SYG
Sbjct: 1109 PLGYKGTIIGVQKNENPLLTMYEVLFDIAFAGGLVMHGCSSNRSYRLAATDFINISYG 1166
>gi|332029616|gb|EGI69505.1| 5'-3' exoribonuclease 1 [Acromyrmex echinatior]
Length = 1679
Score = 1118 bits (2892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/1256 (47%), Positives = 796/1256 (63%), Gaps = 115/1256 (9%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSEVV+E+QIPEFD LYLDMNGIIH CSHPND D FRI+E+ I
Sbjct: 1 MGVPKFFRYISERYPCLSEVVKEHQIPEFDYLYLDMNGIIHTCSHPND-DVCFRISEEMI 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F++IFHYIE+LF MI+P+KLFFMAIDGVAPRAK+NQQRGRRFR+AK+AEV E KA KG
Sbjct: 60 FKNIFHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRGRRFRAAKDAEVQEAKAIAKGI 119
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+P EKRFD C FMA + G
Sbjct: 120 PIPKEKRFD----SNCITPGTLFMA--------------------------------KLG 143
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
E+L + FV+ K++TD WK ++ SG
Sbjct: 144 EQL-------------------------KCFVEHKVSTDD---------AWKKCKILFSG 169
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
E PGEGEHKIMDYIRYMK+ +YN + HCLYGLDADLIMLGLC+HEP FSLLREEVKF
Sbjct: 170 SEVPGEGEHKIMDYIRYMKASKEYNSDSSHCLYGLDADLIMLGLCSHEPNFSLLREEVKF 229
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
+ K +TPEETKF LLHLSL+R+Y+E EF +K+ LSF F IE IIDDWVLM
Sbjct: 230 GKQQVK-----MTPEETKFCLLHLSLLREYIEHEFSPIKDK--LSFSFDIEKIIDDWVLM 282
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
GFL+GNDFIP+LP+LHI NGALP+LY+ Y EVLPTL+GYINE G LNL RFEKF+ +L+
Sbjct: 283 GFLVGNDFIPHLPNLHIANGALPILYRAYMEVLPTLEGYINEAGTLNLDRFEKFMERLSR 342
Query: 421 FDFEQFREKYADIQYLEGKMG-----------KKFSDVFHKEKSKEMDPDLAALIKATDD 469
D EQF E+YADI++ E K G KK D K + DL ALIK+T +
Sbjct: 343 LDVEQFNEQYADIKFFESKTGRRPNESERHIYKKTEDNESASPKKTQNKDLDALIKSTRE 402
Query: 470 ----DYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEV 525
++DD + + Y N + + D E + EF QHK DYY KL+Y V EV
Sbjct: 403 MSLGNFDDD-DIFIEYRNMDLIVDDESDSEI---YNMEFVQHKKDYYMNKLEYENVDEEV 458
Query: 526 LRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPF 585
LR QAE Y+RAIQWNLHYYY+GC SWSWYYPHHYAPYISDIKDF L L++++G+PFLPF
Sbjct: 459 LRSQAEGYVRAIQWNLHYYYHGCCSWSWYYPHHYAPYISDIKDFKDLKLEFDLGQPFLPF 518
Query: 586 QQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDE 645
QQLLAVLPA SK+LLP +Q+L+T E SPI+ YYP F TDLNGK+Q+WEAVVLIPFIDE
Sbjct: 519 QQLLAVLPAFSKDLLPMAFQSLLTEETSPIINYYPHNFKTDLNGKRQEWEAVVLIPFIDE 578
Query: 646 VKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLY 705
L+ AM LT EE++RN+HGPM +Y+Y++ + YFP NHA K +
Sbjct: 579 KLLLAAMQPHLSRLTLEEQARNKHGPMCLYSYTDESQSIHKTTIYFPEFT-NHAQVKLMN 637
Query: 706 RDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIV 765
R++I+V +L +GL D +L +Y FPTL+H+ ++ +E A+VKVFQQ S +S+I+
Sbjct: 638 REEIFVPREQLIRGLSPDFDLDIYYPGFPTLRHLDYSAHLEKARVKVFQQYSVLDSMILT 697
Query: 766 QDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAK-- 823
+P+L +A ++LGK++++ +PHL E+ V V+ + ++S G K
Sbjct: 698 LISKPIPNLTTLASELLGKSVYVEWPHLKEVLVVGVSDCNMKLSLINQLGGYSHDNLKKE 757
Query: 824 DMQDAFQLSK----KSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTF 879
D++ A K + + + ++LG+DIG+T VL+Y + KY FG +GKVT ++ +
Sbjct: 758 DVKGALSAEWNTLCKQVKELHMSRLGIDIGDTNVLLYARAFLGNKYVFGVQGKVTVEKQW 817
Query: 880 IRSTVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEE 938
YAYQ+ V ++ + L Y+T+ +IF PG CF L +P+YG+ G VI +
Sbjct: 818 NDYAAAYAYQTVVKDISVYSKKLPVYETMHDIFIPGTFCFMLGHPYYGAMGEVIHNKEGC 877
Query: 939 NS-FIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDS 997
S IK+S K +EP + Y+P A +L I+ LLSR TG+I++I+S
Sbjct: 878 KSRRIKISIKTMKEPTFDTIKQAYGQQKTRYMPGSVAAQRLGINSHLLSRVTGTIYVIES 937
Query: 998 TEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFL 1057
+ +HN+GLN+KF+++NEEV G+TR++ + +W Y+ + + LI+NYM + P +F L
Sbjct: 938 STIDVTKHNLGLNLKFNKRNEEVPGYTRKENS--QWLYSTKAIELIRNYMTKCPNLFERL 995
Query: 1058 KDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAV 1117
+ ++DI+ +++F +G + V+WLK + + E R CG V++A +V IE V
Sbjct: 996 TQNVANDIFQEEELFT-KGSDELKDTVAWLKTELNG-LESRTCGMDVIEADLVKQIEEKV 1053
Query: 1118 DTCEKVE----KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGY 1173
+ K E K + L VKP LY P L + PDP+++ +LFDR++ +R+ ++VPLG
Sbjct: 1054 EEYLKAEETMAKTVFLQVKPQLLYKPGLHLRSVPPDPNSQNRLFDRILCVRNGFSVPLGT 1113
Query: 1174 RGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIR-CSESRGYRMPAQAMINLSYGER 1228
+GTIIGI G D MYDV+FDKPF G+ + CS+ RGYR+ IN+S+GER
Sbjct: 1114 KGTIIGIRNGSNPIDTMYDVLFDKPFIGGLTLNGCSQFRGYRLSTMDFINISFGER 1169
>gi|380020587|ref|XP_003694164.1| PREDICTED: 5'-3' exoribonuclease 1-like [Apis florea]
Length = 1627
Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/1246 (46%), Positives = 787/1246 (63%), Gaps = 101/1246 (8%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYI+ERYPCL+E +++YQIPEFDNLYLD+NGIIH CSHP+D D FRI+E
Sbjct: 1 MGIPKFFRYINERYPCLTEKLKDYQIPEFDNLYLDLNGIIHECSHPDDTDVTFRISE--- 57
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
EI+F+ I
Sbjct: 58 --------EIIFKNI--------------------------------------------- 64
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F +I + FC P+KLFF+AIDGVAPRAK+NQQR RRF++AK+A++ E KAK
Sbjct: 65 -------FRYIQVLFCMIQPQKLFFIAIDGVAPRAKINQQRSRRFKAAKDAQIQEAKAKA 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VI 237
KG LP EKRFDSNCITPGT FM +L +QL+YF+ KI+TDKLW+ C VI
Sbjct: 118 KGINLPKEKRFDSNCITPGTLFMSKLDEQLKYFITYKISTDKLWQK----------CKVI 167
Query: 238 LSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE 297
LSG + PGEGEHKIMDYIR+MK++P+Y+ N +HCLYGLDADLIMLGLCTHE +F+LLREE
Sbjct: 168 LSGSQVPGEGEHKIMDYIRHMKAQPNYDVNTKHCLYGLDADLIMLGLCTHEIHFTLLREE 227
Query: 298 VKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDW 357
+ F K K +TPEETKF L HLSL+R+Y+ EF LKE L F + +E IIDDW
Sbjct: 228 LTFGKKQRK---VCLTPEETKFCLFHLSLLREYINHEFSSLKEK--LPFSYDLEKIIDDW 282
Query: 358 VLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTK 417
+LMGFLIGNDFIP+LP+LHII+GAL +LY+VY +V+PTLDGYINE G L L RFEKF+ +
Sbjct: 283 ILMGFLIGNDFIPHLPNLHIIHGALSVLYQVYIDVMPTLDGYINEAGTLRLDRFEKFMER 342
Query: 418 LASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDD--GT 475
L+ FD QF E YAD++YLE K G+ + + K + ++ + K D ++D T
Sbjct: 343 LSRFDILQFSEYYADLKYLESKTGRSLIETEKLNEKKSSNEEIRSPKKVQDKEFDMLLRT 402
Query: 476 EEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIR 535
++ Y++ D+ + + EF Q K DYY KL Y + + LR QAE Y+R
Sbjct: 403 AAEMSLGRYDDEDGGDDKSDSEM-YTMEFVQCKKDYYINKLKYENIDEDFLRSQAEGYVR 461
Query: 536 AIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAA 595
AIQWNL+YYYNGC SWSWYYPHHYAPYISDIKDF L L++E+GEPFLPF+QLLAVLP+
Sbjct: 462 AIQWNLNYYYNGCCSWSWYYPHHYAPYISDIKDFKDLKLEFELGEPFLPFEQLLAVLPSY 521
Query: 596 SKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
SKELLP +Q L+T E SPI+ YYP EF TDLNGK+Q+WEAVVLIPFI+E L+ AM
Sbjct: 522 SKELLPSAFQTLLTEEQSPIINYYPSEFETDLNGKEQEWEAVVLIPFINEKDLLDAMAPH 581
Query: 656 EHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNK 715
LT EE++RN+HGPM ++TY+ LG AP+YFP + N A + + R+DIYV K
Sbjct: 582 YSKLTLEEQARNKHGPMCLFTYTEEELGVYHAPEYFPNVINNFAKIQLINREDIYVPREK 641
Query: 716 LRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLK 775
L +GLC V +Y F T++H++ T +E AK+KVFQ+ S ES+I+ +L
Sbjct: 642 LVRGLCSGVRPDIYYPGFSTIQHIEHTASLEKAKIKVFQRQSNRESMILHIKPQPKINLT 701
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDA-FQLSKK 834
+ ++LG+ +F+N+PHL E V V++ N P +R + + + + KK
Sbjct: 702 TIGSKLLGQIVFVNWPHLKEALVIGVSSSSCMKMNLIN--PQMKRLYDTIDGSEWTVEKK 759
Query: 835 SITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAV-- 892
IT+ Y +LGVDIG T+ LV+ + + +KY FG GKV ++ + YAYQ+ V
Sbjct: 760 RITETYKDRLGVDIGETKFLVHVRLLVGKKYTFGSYGKVHIEKHWSEIPSCYAYQTVVKD 819
Query: 893 LNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVI-STVKEENSFIKLSFKVQQE 951
+ + + YKT+++IF PG CF L +P+YG+ G V S + +++ IK+S +E
Sbjct: 820 ITIHCNNNTPIYKTVNDIFEPGITCFMLGHPYYGAMGKVRESAICKKSGRIKVSVITVRE 879
Query: 952 PDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDST---EEGAKRHNIG 1008
P + +Q D Y+ + +L ISPLLLSR TG+IF+ S+ ++ HNIG
Sbjct: 880 PSFEGIKQIQADLQTQYMRGNIASQRLGISPLLLSRITGTIFVKQSSNGLQQDDVTHNIG 939
Query: 1009 LNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLR 1068
N+KF++KN E+ G+TR+ E WFY+ +V+ LI++YM + P +F L + + I+
Sbjct: 940 FNLKFTKKNAEIPGYTRKAEDG-PWFYSPKVLDLIRSYMLRCPTLFERLAQNPTTGIFQE 998
Query: 1069 DDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEK----VE 1124
+D+F +G + V+WLKEQ H E R CG +V++ +V +E VDT K +
Sbjct: 999 EDLFI-KGSGELNDTVAWLKEQLHG-IESRTCGREIVESSIVKKLEEEVDTYLKSSNSIG 1056
Query: 1125 KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGE 1184
K + + V+P LY P + L PDP + L DR+ I+D +TVPLGY+GT+IGI + E
Sbjct: 1057 KVVDMQVQPYLLYTPSLRVRNLSPDPKAETYLLDRICCIKDNFTVPLGYKGTVIGIQKME 1116
Query: 1185 TSYDAMYDVVFDKPFPHGVKIR-CSESRGYRMPAQAMINLSYGERL 1229
D MYDV+FDKP G+ I SE R YR+ A IN+SYG+R+
Sbjct: 1117 NVSDTMYDVLFDKPIIGGLSINGSSEFRAYRLAALDFINISYGQRI 1162
>gi|66514180|ref|XP_393481.2| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Apis mellifera]
Length = 1633
Score = 1094 bits (2830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/1246 (46%), Positives = 785/1246 (63%), Gaps = 101/1246 (8%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYI+ERYPCL+E +++YQIPEFDNLYLD+NGIIH CSHP+D D FRI+E
Sbjct: 1 MGIPKFFRYINERYPCLTEKLKDYQIPEFDNLYLDLNGIIHECSHPDDTDITFRISE--- 57
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
EI+F+ I
Sbjct: 58 --------EIIFKNI--------------------------------------------- 64
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F +I + FC P+KLFF+AIDGVAPRAK+NQQR RRF++AK+A++ E KA+
Sbjct: 65 -------FRYIQVLFCMIQPQKLFFIAIDGVAPRAKINQQRSRRFKAAKDAQIQEAKARA 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VI 237
KG LP EKRFDSNCITPGT FM +L +QL+YF+ KI+TDKLW+ C VI
Sbjct: 118 KGINLPKEKRFDSNCITPGTLFMSKLDEQLKYFITYKISTDKLWQK----------CKVI 167
Query: 238 LSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE 297
LSG + PGEGEHKIMDYIR+MK++P+Y+ N +HCLYGLDADLIMLGLCTHE +F+LLREE
Sbjct: 168 LSGSQVPGEGEHKIMDYIRHMKAQPNYDVNTKHCLYGLDADLIMLGLCTHEIHFTLLREE 227
Query: 298 VKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDW 357
+ F K K +TPEETKF L HLSL+R+Y+ EF LKE L F + +E IIDDW
Sbjct: 228 LTFGKKQRK---VCLTPEETKFCLFHLSLLREYINHEFSSLKEK--LPFSYDLEKIIDDW 282
Query: 358 VLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTK 417
+LMGFLIGNDFIP+LP+LHII+GAL +LY+VY +V+PTLDGYINE G L L RFEKF+ +
Sbjct: 283 ILMGFLIGNDFIPHLPNLHIIHGALSVLYQVYIDVMPTLDGYINEAGTLRLDRFEKFMER 342
Query: 418 LASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDD--GT 475
L+ FD QF E YAD++YLE K G+ + + K + ++ + K D ++D T
Sbjct: 343 LSRFDILQFSEYYADLKYLESKTGRSLIETEKLNEKKSSNEEIRSPKKVQDKEFDMLLRT 402
Query: 476 EEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIR 535
++ Y++ D+ + + EF Q K DYY KL Y + + LR QAE Y+R
Sbjct: 403 AAEMSLGRYDDEDGGDDKSDSEM-YTMEFVQCKKDYYINKLKYENIDEDFLRSQAEGYVR 461
Query: 536 AIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAA 595
AIQWNL+YYYNGC SWSWYYPHHYAPYISDIKDF L L++E+GEPFLPF+QLLAVLP+
Sbjct: 462 AIQWNLNYYYNGCCSWSWYYPHHYAPYISDIKDFKDLKLEFELGEPFLPFEQLLAVLPSY 521
Query: 596 SKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
SKELLP +Q L+T E SPI+ YYP EF TDLNGK+Q+WEAVVLIPFI+E L+ AM
Sbjct: 522 SKELLPSAFQTLLTEEQSPIINYYPSEFETDLNGKEQEWEAVVLIPFINEKDLLDAMAPH 581
Query: 656 EHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNK 715
L+ EE++RN+HGPM ++TY+ LG AP+YFP + N+A + + R+DIYV K
Sbjct: 582 YSKLSLEEQARNKHGPMCLFTYTEEELGMYHAPEYFPNVINNYAKVQLINREDIYVPREK 641
Query: 716 LRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLK 775
L +GLC V +Y F T++H++ T +E AK+KVFQ+ S ES+I+ +L
Sbjct: 642 LVRGLCSGVRPDIYYPGFSTIQHIEHTASLEKAKIKVFQRQSNRESMILHIKPQPKINLT 701
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDA-FQLSKK 834
+ ++LG+ +F+N+PHL E V V++ N P +R + + + + KK
Sbjct: 702 TIGSKLLGQIVFVNWPHLKEALVIGVSSSSCMKMNLIN--PQIKRLYDTIDGSEWTVEKK 759
Query: 835 SITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAV-- 892
IT+ Y +LGVDIG T+ LV+ + + +KY FG GKV ++ + YAYQ+ V
Sbjct: 760 RITETYKDRLGVDIGETKFLVHVRLLVGKKYTFGSYGKVHIEKHWSEIPSCYAYQTIVKE 819
Query: 893 LNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVI-STVKEENSFIKLSFKVQQE 951
+ + YKT+++IF PG CF L +P+YG+ G V S + +++ IK+S +E
Sbjct: 820 ITIHCNNNIPIYKTVNDIFEPGITCFMLGHPYYGAMGKVRESAICKKSGRIKVSVITVRE 879
Query: 952 PDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDST---EEGAKRHNIG 1008
P + +Q D Y+ + +L ISPLLLSR TG+IF+ S+ ++ HNIG
Sbjct: 880 PSFEGIKQIQADLQTQYMRGNIASQRLGISPLLLSRITGTIFVKQSSNGLQQDEVTHNIG 939
Query: 1009 LNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLR 1068
N+KF++KN E+ G+TR+ E WFY+ +V+ LI++YM + P +F L + + I+
Sbjct: 940 FNLKFTKKNAEIPGYTRKAEDG-PWFYSPKVLDLIRSYMLRCPTLFERLAQNPTTGIFQE 998
Query: 1069 DDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEK----VE 1124
+D+F +G + V+WLKEQ H E R CG +++ +V +E VDT K
Sbjct: 999 EDLFI-KGSGELNDTVAWLKEQLHG-IESRTCGRETIESSIVKKLEEEVDTYLKSPNSTG 1056
Query: 1125 KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGE 1184
K + + V+P LY P + L PDP + L DR+ I+D +TVPLGY+GT+IGI + E
Sbjct: 1057 KVVDMQVQPYLLYTPSLRVRNLSPDPKAETYLLDRICCIKDNFTVPLGYKGTVIGIQKME 1116
Query: 1185 TSYDAMYDVVFDKPFPHGVKIR-CSESRGYRMPAQAMINLSYGERL 1229
D MYDV+FDKP G+ I SE R YR+ A IN+SYG+R+
Sbjct: 1117 NVSDTMYDVLFDKPIIGGLSINGSSEFRAYRLAALDFINISYGQRI 1162
>gi|322801303|gb|EFZ21990.1| hypothetical protein SINV_11797 [Solenopsis invicta]
Length = 1572
Score = 1091 bits (2821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1251 (47%), Positives = 786/1251 (62%), Gaps = 121/1251 (9%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSEVV+E+QIPEFD LYLDMNGIIH CSHPND D FRI+E+ +
Sbjct: 1 MGVPKFFRYISERYPCLSEVVKEHQIPEFDYLYLDMNGIIHTCSHPND-DICFRISEEMM 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F++IFHYIE+LF MI+P+KLFFMAIDGVAPRAK+NQQRGRRFRSAK+AE+ E KA KG
Sbjct: 60 FKNIFHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRGRRFRSAKDAEIQEAKAIAKGV 119
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
++PTEKRFD C FM AK ++L
Sbjct: 120 QIPTEKRFD----SNCITPGTLFM---------------------AKLGDLL-------- 146
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL-S 239
KRF V+ KI+ D+ WK C IL S
Sbjct: 147 ------KRF----------------------VEYKISVDEGWKK----------CKILFS 168
Query: 240 GHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK 299
G E PGEGEHKIMDYIRYMK+ DY+ N RHCLYGLDADLIMLGLC+HEP FSLLREEVK
Sbjct: 169 GAEVPGEGEHKIMDYIRYMKASEDYDSNSRHCLYGLDADLIMLGLCSHEPNFSLLREEVK 228
Query: 300 FNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVL 359
F + K TPEETKF LLHLSL+R Y+E EF +K+ LSFPF IE IIDDWVL
Sbjct: 229 FGKQQVK-----TTPEETKFCLLHLSLLRKYIEHEFSPIKDK--LSFPFDIEKIIDDWVL 281
Query: 360 MGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
MGFL+GNDFIP+LP+LHI NGALP+LY+ Y EVLPTL+GYINE G L L RFEKF+ KL+
Sbjct: 282 MGFLVGNDFIPHLPNLHIANGALPILYRAYMEVLPTLEGYINEAGTLQLDRFEKFMEKLS 341
Query: 420 SFDFEQFREKYADIQYLEGKMG-----------KKFSDVFHKEKSKEMDPDLAALIKATD 468
D EQF E YADI++ E K G KK D K + DL ALIK+T
Sbjct: 342 RLDVEQFNEHYADIKFFEAKTGRRPNESERHVYKKLEDSNSVSPKKTQNKDLDALIKSTT 401
Query: 469 DDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFS-EFGQHKTDYYHYKLDYAKVTNEVLR 527
+ Y D + D+E ++ ++ EF QHK DYY KL+Y V EVLR
Sbjct: 402 EMYRDMDLMI--------------DDESDSDIYNMEFVQHKKDYYMNKLEYENVDEEVLR 447
Query: 528 DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQ 587
QAE Y+RAIQWNLHYYY+GC SWSWYYPHHYAPYISDIKDF L L++E+GEPFLPFQQ
Sbjct: 448 SQAEGYVRAIQWNLHYYYHGCCSWSWYYPHHYAPYISDIKDFKDLKLEFELGEPFLPFQQ 507
Query: 588 LLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVK 647
LLAVLPA SK LLP+ +Q+L+T E+SPI+ YYP F TDLNGK+Q+WEAVVLIPFIDE
Sbjct: 508 LLAVLPAYSKALLPDAFQSLLTEESSPIISYYPHNFKTDLNGKRQEWEAVVLIPFIDEKL 567
Query: 648 LIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRD 707
L+ AM LT EE++RN+ GPM +++YS YFP +HA K + RD
Sbjct: 568 LLSAMQPHLSRLTMEEQARNKQGPMCLFSYSEEAGSVHKTTIYFPEF-ISHAQVKLMNRD 626
Query: 708 DIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQD 767
+++V +L +GL +L LY FP L+H+ + +E AKVKVFQQPS +++I+
Sbjct: 627 EVFVPRERLIRGLSPGFDLDLYYPGFPILRHLDHSAHLEKAKVKVFQQPSVGDNMILSLI 686
Query: 768 KVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISF-----DKNSGPVFERAA 822
P++ +A +ILGK++++ +PHL E V VA + ++S D N + +
Sbjct: 687 LKPTPNVVTLASEILGKSVYVEWPHLKEALVIGVANVNVKLSLINQLGDYNPNNLKKEDV 746
Query: 823 KDMQDA-FQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIR 881
K + + K I + + ++LG++IG+TE+L+Y + KY F +GKVT + +
Sbjct: 747 KGLLSTEWHAHCKQIKEIHMSRLGINIGDTEILLYTRLFLGNKYVFDAQGKVTITKQWND 806
Query: 882 STVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENS 940
YAYQ+ V N+ + L ++T+ +IF PG CF L +P+YG+ G V+ S
Sbjct: 807 YPTVYAYQTVVRNISTYSKKLPVFETMHDIFIPGTFCFMLGHPYYGAMGKVMQNKDSSKS 866
Query: 941 -FIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
IK+S +EP + Y+ A +L IS LLSR TG+I++I +++
Sbjct: 867 RRIKISINNVKEPTFEAVKQAYSHQKTRYMHGSIAAQRLGISSHLLSRITGTIYVIQASK 926
Query: 1000 EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKD 1059
+ ++N+GLN+KF+++NEEV G+TR++ + +W Y+ + + LI+NYM + P +F L
Sbjct: 927 DELSKYNLGLNLKFNKRNEEVPGYTRKENS--QWLYSTKAIELIRNYMTKCPNLFERLAQ 984
Query: 1060 HSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDT 1119
+ ++DI+ +++F +G + V+WLK + E R CG +V+A +V IE V+
Sbjct: 985 NVTNDIFQEEELF-GKGSDELKTTVAWLKTELQG-LESRACGMDIVEADLVKEIEKEVEE 1042
Query: 1120 CEKV-EKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTII 1178
K EK + L VKP LY P L + PDP+++ +LFDR+ ++R ++VPLG +GTII
Sbjct: 1043 YLKTEEKTVFLQVKPQLLYKPSLHLRSVPPDPNSQNRLFDRIRSVRSDFSVPLGSKGTII 1102
Query: 1179 GIVQGETSYDAMYDVVFDKPFPHGVKIR-CSESRGYRMPAQAMINLSYGER 1228
GI +G D MYDV+FDKPF G+ + CSE RGYR+ A IN+S+GER
Sbjct: 1103 GIRKGNNLLDTMYDVLFDKPFMGGLTLSGCSEFRGYRLTAMDFINISFGER 1153
>gi|291220730|ref|XP_002730377.1| PREDICTED: rCG25308-like [Saccoglossus kowalevskii]
Length = 2104
Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/1277 (44%), Positives = 782/1277 (61%), Gaps = 120/1277 (9%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVVRE QIPEFDNLYLDMNG+IH CSHPND+DPHFRI+E++I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVRENQIPEFDNLYLDMNGVIHVCSHPNDDDPHFRISEEKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F+DIFHYIE+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSA+ AE E+KA KGE
Sbjct: 61 FKDIFHYIEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSARAAEEQEKKALSKGE 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
LPTEKRFD C FM K+N+Q
Sbjct: 121 TLPTEKRFD----SNCITPGTEFM--------VKLNEQ---------------------- 146
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
L+YFV KIT D++ W+ + + LSG
Sbjct: 147 ---------------------------LKYFVNKKITEDEM---------WRGLRIYLSG 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HETPGEGEHK+M++IR K+ P Y+PN RHCLYGLDADL+MLGL +HEP+FSLLREEV+F
Sbjct: 171 HETPGEGEHKVMEFIRAEKADPKYDPNTRHCLYGLDADLMMLGLTSHEPHFSLLREEVRF 230
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
KS + + TPEET F LLHLSL R+YLE EF +K G +SF + +E IIDDWVLM
Sbjct: 231 GKKSQQ--KRTPTPEETTFHLLHLSLFREYLEFEFQDVK--GKISFDYDLERIIDDWVLM 286
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
GFL+GNDFIP+LPDLHI + ALPLLYK Y EVLP +DGY+NE G LNLKRFE +L KL+
Sbjct: 287 GFLVGNDFIPHLPDLHINHDALPLLYKTYIEVLPLVDGYLNEDGILNLKRFEVYLKKLSE 346
Query: 421 FDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKA-------------- 466
FD +F E D++Y EGK G + ++ K+ + AL A
Sbjct: 347 FDRNKFSETSVDLKYFEGKKGSTEGSAWKGQRIKKREEKKEALRAAKNLAQASMFQVLST 406
Query: 467 ---TDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTN 523
++D D+G + + ++E D D + F EF QHK +YY KL Y VT
Sbjct: 407 TEESEDSSDNGNKNSVETL-FDEETKLDADVDEAEIFEMEFRQHKRNYYQTKLGYENVTE 465
Query: 524 EVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFL 583
EVL+DQA CY+ IQW LHYYYNG SW WYYPHHYAP++SD+ FS LKY++G PF
Sbjct: 466 EVLKDQALCYVTGIQWILHYYYNGVQSWGWYYPHHYAPFMSDVCGFSDCELKYDIGRPFK 525
Query: 584 PFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFI 643
PF+QLLAVLPAAS ELLP+P+Q+LM ++NSPI+EYYP +F TDLNGK+QDWEAVVLIPFI
Sbjct: 526 PFEQLLAVLPAASGELLPKPFQSLMIMDNSPIIEYYPVDFDTDLNGKQQDWEAVVLIPFI 585
Query: 644 DEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---NVNLGTALAPDYFPAINENHAV 700
DE L+ AM + ++LTDEE+ RN HGP L+YTY + ++L P F IN +HA
Sbjct: 586 DEKCLLDAMAPLNNILTDEEKRRNSHGPHLLYTYDKELSFCYPSSL-PGVFTDINCSHAK 644
Query: 701 EKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNE 760
+ + D + +K+RKGL ++ FPT++HV +++ VKVFQ SR +
Sbjct: 645 CEEVPLDAFRIDISKMRKGLLVGTKQGVFYPGFPTMRHVPHKAQLKKEGVKVFQMNSRGD 704
Query: 761 SIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISF--DKNSGPVF 818
++++ P +++VA+++LGKTIF +PHL E+RV +V R K+ P
Sbjct: 705 NMMLYIMNDSEPEIEKVANELLGKTIFAGWPHLQEVRVVSVTDDQFRYELKESKSKNPAH 764
Query: 819 ERAAKDM------QDAFQLSK--KSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPR 870
++ + ++A + K +SIT+ Y + GV+IG T V+VY P+ R+Y G
Sbjct: 765 NGTSEIICYEQSDREAARWVKEVQSITEHYRGRKGVEIGQTFVIVYATPMAGRRYVCGAG 824
Query: 871 GKVTQQRTFIRSTVTYAYQSAVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGG 929
G +T ++ + + T+A Q+ V ++ S ++ ++++F P +CF L PHYG G
Sbjct: 825 GLITLEKQWESTPTTFALQTTVKDIAAYDPSFKQFSNLEDLFPPESECFMLGTPHYGCMG 884
Query: 930 CVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFT 989
VI ++ I++ F EP L ++ Q Y+P Y +A +L IS L+SR T
Sbjct: 885 EVIEVDRKGEPRIRVVFSTPSEPRLDHIMKQQWKYEVKYVPGYILAQRLGISSHLVSRIT 944
Query: 990 GSIFIIDSTEEGA----KRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKN 1045
GS ++ + + NIGLN+KF+++N+EV GFTR+DE W Y+ + +I +
Sbjct: 945 GSFLVLKGSSRSGNPNPSKVNIGLNLKFNKRNKEVAGFTRKDE-DGNWTYSIKTQHIIAD 1003
Query: 1046 YMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVV 1105
Y+++FP++F + ++ +D++ DDVF + R +QI WLK E G +
Sbjct: 1004 YIEKFPDLFDHVSQNAQNDMFYEDDVFGEDSD-RASQISDWLKTLSCHGVEQTEVGLKSL 1062
Query: 1106 DAKVVSLIEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNI 1163
D VV I+ ++ + K ++++ + VKP L+ P L PDPD ++LFDRV+N+
Sbjct: 1063 DENVVKAIQEEMEKNKQNKTKRKLKMSVKPYLLFRPVDQQGHLIPDPDADYELFDRVINV 1122
Query: 1164 RDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINL 1223
RD +TVPLG RG + GI+ D +Y+V+FD F + IR S +RGY MP ++IN+
Sbjct: 1123 RDGFTVPLGLRGVVTGIISAVRPADILYEVIFDDEFLDALVIRGSGARGYHMPPSSLINI 1182
Query: 1224 SYGERL-----CGNSNP 1235
SYG R CG P
Sbjct: 1183 SYGMRKEHSQECGMQKP 1199
>gi|270007014|gb|EFA03462.1| hypothetical protein TcasGA2_TC013457 [Tribolium castaneum]
Length = 1531
Score = 1052 bits (2721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/1134 (48%), Positives = 739/1134 (65%), Gaps = 63/1134 (5%)
Query: 121 RLPTEKRFD--FITLKFCF----PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQ 174
R+ EK F F ++F F P+K+FFMA+DGVAPRAKMNQQRGRRFRSAK+AE +E
Sbjct: 54 RITEEKIFADIFHYIEFLFRMIKPQKVFFMAVDGVAPRAKMNQQRGRRFRSAKDAEKMEL 113
Query: 175 KAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDV 234
+AK+KGE+LP +RFDSNCITPGT FM RLH+QL+YFV K++TD +WK
Sbjct: 114 EAKKKGEKLPDVERFDSNCITPGTEFMARLHEQLKYFVVSKVSTDNMWKK---------- 163
Query: 235 C-VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSL 293
C +ILSGHETPGEGEHKIMDYIRY++S+P Y+PN RHCLYGLDADLIMLGLCTH+P+FSL
Sbjct: 164 CKIILSGHETPGEGEHKIMDYIRYIRSQPGYDPNTRHCLYGLDADLIMLGLCTHDPHFSL 223
Query: 294 LREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLS--FPFSIE 351
LREEVKF K+ + PEE +F+LLHLSLMR+YLE+EF LKE S F IE
Sbjct: 224 LREEVKFGKKAKRSN----VPEEIRFYLLHLSLMREYLEMEFSPLKEALKDSDKIKFDIE 279
Query: 352 NIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRF 411
NIIDDW+LMGFL+GNDFIPNLP+LHI NGALP+LYK Y EVLPTLDGYINE G LNL+RF
Sbjct: 280 NIIDDWILMGFLVGNDFIPNLPNLHISNGALPVLYKAYIEVLPTLDGYINEAGTLNLERF 339
Query: 412 EKFLTKLASFDFEQFREKYADIQYLEGKMGKKF-------SDVFHKEKSKEMDPDLAALI 464
EKF+ KLA D + F E D+ Y E K G+K S + K++DP LA LI
Sbjct: 340 EKFMKKLADVDIKNFEEIQDDLTYFERKTGRKATAHLPVSSKPVKNGEEKKIDPALAELI 399
Query: 465 KATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNE 524
ATD EE + E + F +K +YY KL++ +VT E
Sbjct: 400 AATDSLAVSSDEEDFESSISSEEDEA-------------FKSYKDEYYRNKLEFQEVTRE 446
Query: 525 VLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLP 584
V+R+QAE Y+RAIQWNL+YYYNG SWSW+YPHHY+PYISDIK FS L + +E+G+PF P
Sbjct: 447 VMREQAEGYVRAIQWNLNYYYNGVCSWSWFYPHHYSPYISDIKGFSDLKIDFELGKPFKP 506
Query: 585 FQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFID 644
++QLLAVLP ASK+LLPE Y +LMT +NS I YYPEEF TDLNGK+Q+WEAVVL+PFID
Sbjct: 507 YEQLLAVLPPASKKLLPECYHSLMTDDNSLIKSYYPEEFQTDLNGKRQEWEAVVLVPFID 566
Query: 645 EVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPL 704
E L+ AM LLT EE RN HGPMLVY Y++ +LG P YFP + N A P+
Sbjct: 567 EKNLLNAMKPCNELLTPEEAKRNNHGPMLVYEYTDEDLGVYEPPSYFPKV-VNRARCTPV 625
Query: 705 YRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII 764
+DI V +KL KG V +Y FPTLKH+++ K + A+VKVF+ PSRNES+I+
Sbjct: 626 NIEDIRVPKDKLVKGAYPGVVFDVYYPGFPTLKHLKYESKFKKARVKVFEMPSRNESLIL 685
Query: 765 VQDKVQVPSLKQVADQI----LGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFER 820
+PS K D I LGK +++ +P+L E +V A++ + + F + +
Sbjct: 686 ----RILPSEKYTGDSIPLDLLGKVVWVGWPNLTEAKVIAISNRKEKYVFSGTNNHKVDD 741
Query: 821 AAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFI 880
K+ F+ + ++ Y ++G++ GNT+VLV+ + RKY F + T +R F
Sbjct: 742 RTKN--STFESELEGVSQYYRERMGIEFGNTDVLVHVNLLSGRKYVFTSNMRATLERQFT 799
Query: 881 RSTVTYAYQSAVLNLQQARE-SLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKE-E 938
+ Y QS V ++ + ++T+ ++F P CF+L+NP+YGS G ++ + +
Sbjct: 800 QIQSNYPLQSIVTDIAIHDDLRTNFQTVSDVFAPNSICFSLTNPYYGSQGTIVDCAESLK 859
Query: 939 NSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDST 998
N+ +K+S V EPDLS ++ + NY+ A +L++S + SR TGS+F+ T
Sbjct: 860 NNHLKVSLTVTAEPDLSKAQNIDEKLKRNYMSLANSACQLAMSNYVFSRITGSLFVQTRT 919
Query: 999 EEGA-KRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFL 1057
EG K NIGL++KFS+KN+E G+TR+ E WFYT + V L++ Y+ FPEVF FL
Sbjct: 920 NEGLFKTVNIGLDMKFSKKNQETPGYTRKIENV--WFYTSKAVDLVREYINNFPEVFRFL 977
Query: 1058 KDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAV 1117
S+DD+ D +F G+++V I +WLK P E R CG++V++ +VV+ IE V
Sbjct: 978 ASGSNDDLDA-DAIFGEDGDEKVKSIQTWLKSLPVHNIERRVCGSSVLEPEVVAEIEKEV 1036
Query: 1118 DTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTI 1177
D + K I + +KP+ LY P+ L PDP + ++FDR+VN+R+ +TVPLG +GT+
Sbjct: 1037 DQLKDSPKNIVMQIKPHLLYKPEIQTGYLAPDPLARTRVFDRIVNVREGFTVPLGLKGTV 1096
Query: 1178 IGIVQGET---SYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
I I + + + +YD+VFDKPF G+ + CSE RGYR+ + IN+SYG R
Sbjct: 1097 IAIHKSPNVLKNENEIYDIVFDKPFAGGLALNCSEQRGYRLSKISFINISYGRR 1150
Score = 236 bits (602), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/129 (81%), Positives = 120/129 (93%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE V+EYQIP FDNLYLDMNGIIH CSHP+DN+PHFRITE++I
Sbjct: 1 MGVPKFFRYISERYPCLSEFVKEYQIPVFDNLYLDMNGIIHMCSHPDDNNPHFRITEEKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHYIE LFRMI+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAK+AE +E +AK+KGE
Sbjct: 61 FADIFHYIEFLFRMIKPQKVFFMAVDGVAPRAKMNQQRGRRFRSAKDAEKMELEAKKKGE 120
Query: 121 RLPTEKRFD 129
+LP +RFD
Sbjct: 121 KLPDVERFD 129
>gi|189237444|ref|XP_974750.2| PREDICTED: similar to 5-3 exoribonuclease 1 [Tribolium castaneum]
Length = 1485
Score = 1052 bits (2720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/1134 (48%), Positives = 739/1134 (65%), Gaps = 63/1134 (5%)
Query: 121 RLPTEKRFD--FITLKFCF----PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQ 174
R+ EK F F ++F F P+K+FFMA+DGVAPRAKMNQQRGRRFRSAK+AE +E
Sbjct: 54 RITEEKIFADIFHYIEFLFRMIKPQKVFFMAVDGVAPRAKMNQQRGRRFRSAKDAEKMEL 113
Query: 175 KAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDV 234
+AK+KGE+LP +RFDSNCITPGT FM RLH+QL+YFV K++TD +WK
Sbjct: 114 EAKKKGEKLPDVERFDSNCITPGTEFMARLHEQLKYFVVSKVSTDNMWKK---------- 163
Query: 235 C-VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSL 293
C +ILSGHETPGEGEHKIMDYIRY++S+P Y+PN RHCLYGLDADLIMLGLCTH+P+FSL
Sbjct: 164 CKIILSGHETPGEGEHKIMDYIRYIRSQPGYDPNTRHCLYGLDADLIMLGLCTHDPHFSL 223
Query: 294 LREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLS--FPFSIE 351
LREEVKF K+ + PEE +F+LLHLSLMR+YLE+EF LKE S F IE
Sbjct: 224 LREEVKFGKKAKRSN----VPEEIRFYLLHLSLMREYLEMEFSPLKEALKDSDKIKFDIE 279
Query: 352 NIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRF 411
NIIDDW+LMGFL+GNDFIPNLP+LHI NGALP+LYK Y EVLPTLDGYINE G LNL+RF
Sbjct: 280 NIIDDWILMGFLVGNDFIPNLPNLHISNGALPVLYKAYIEVLPTLDGYINEAGTLNLERF 339
Query: 412 EKFLTKLASFDFEQFREKYADIQYLEGKMGKKF-------SDVFHKEKSKEMDPDLAALI 464
EKF+ KLA D + F E D+ Y E K G+K S + K++DP LA LI
Sbjct: 340 EKFMKKLADVDIKNFEEIQDDLTYFERKTGRKATAHLPVSSKPVKNGEEKKIDPALAELI 399
Query: 465 KATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNE 524
ATD EE + E + F +K +YY KL++ +VT E
Sbjct: 400 AATDSLAVSSDEEDFESSISSEEDEA-------------FKSYKDEYYRNKLEFQEVTRE 446
Query: 525 VLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLP 584
V+R+QAE Y+RAIQWNL+YYYNG SWSW+YPHHY+PYISDIK FS L + +E+G+PF P
Sbjct: 447 VMREQAEGYVRAIQWNLNYYYNGVCSWSWFYPHHYSPYISDIKGFSDLKIDFELGKPFKP 506
Query: 585 FQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFID 644
++QLLAVLP ASK+LLPE Y +LMT +NS I YYPEEF TDLNGK+Q+WEAVVL+PFID
Sbjct: 507 YEQLLAVLPPASKKLLPECYHSLMTDDNSLIKSYYPEEFQTDLNGKRQEWEAVVLVPFID 566
Query: 645 EVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPL 704
E L+ AM LLT EE RN HGPMLVY Y++ +LG P YFP + N A P+
Sbjct: 567 EKNLLNAMKPCNELLTPEEAKRNNHGPMLVYEYTDEDLGVYEPPSYFPKV-VNRARCTPV 625
Query: 705 YRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII 764
+DI V +KL KG V +Y FPTLKH+++ K + A+VKVF+ PSRNES+I+
Sbjct: 626 NIEDIRVPKDKLVKGAYPGVVFDVYYPGFPTLKHLKYESKFKKARVKVFEMPSRNESLIL 685
Query: 765 VQDKVQVPSLKQVADQI----LGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFER 820
+PS K D I LGK +++ +P+L E +V A++ + + F + +
Sbjct: 686 ----RILPSEKYTGDSIPLDLLGKVVWVGWPNLTEAKVIAISNRKEKYVFSGTNNHKVDD 741
Query: 821 AAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFI 880
K+ F+ + ++ Y ++G++ GNT+VLV+ + RKY F + T +R F
Sbjct: 742 RTKN--STFESELEGVSQYYRERMGIEFGNTDVLVHVNLLSGRKYVFTSNMRATLERQFT 799
Query: 881 RSTVTYAYQSAVLNLQQARE-SLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKE-E 938
+ Y QS V ++ + ++T+ ++F P CF+L+NP+YGS G ++ + +
Sbjct: 800 QIQSNYPLQSIVTDIAIHDDLRTNFQTVSDVFAPNSICFSLTNPYYGSQGTIVDCAESLK 859
Query: 939 NSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDST 998
N+ +K+S V EPDLS ++ + NY+ A +L++S + SR TGS+F+ T
Sbjct: 860 NNHLKVSLTVTAEPDLSKAQNIDEKLKRNYMSLANSACQLAMSNYVFSRITGSLFVQTRT 919
Query: 999 EEGA-KRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFL 1057
EG K NIGL++KFS+KN+E G+TR+ E WFYT + V L++ Y+ FPEVF FL
Sbjct: 920 NEGLFKTVNIGLDMKFSKKNQETPGYTRKIENV--WFYTSKAVDLVREYINNFPEVFRFL 977
Query: 1058 KDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAV 1117
S+DD+ D +F G+++V I +WLK P E R CG++V++ +VV+ IE V
Sbjct: 978 ASGSNDDLDA-DAIFGEDGDEKVKSIQTWLKSLPVHNIERRVCGSSVLEPEVVAEIEKEV 1036
Query: 1118 DTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTI 1177
D + K I + +KP+ LY P+ L PDP + ++FDR+VN+R+ +TVPLG +GT+
Sbjct: 1037 DQLKDSPKNIVMQIKPHLLYKPEIQTGYLAPDPLARTRVFDRIVNVREGFTVPLGLKGTV 1096
Query: 1178 IGIVQGET---SYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
I I + + + +YD+VFDKPF G+ + CSE RGYR+ + IN+SYG R
Sbjct: 1097 IAIHKSPNVLKNENEIYDIVFDKPFAGGLALNCSEQRGYRLSKISFINISYGRR 1150
Score = 236 bits (602), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/129 (81%), Positives = 120/129 (93%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE V+EYQIP FDNLYLDMNGIIH CSHP+DN+PHFRITE++I
Sbjct: 1 MGVPKFFRYISERYPCLSEFVKEYQIPVFDNLYLDMNGIIHMCSHPDDNNPHFRITEEKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHYIE LFRMI+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAK+AE +E +AK+KGE
Sbjct: 61 FADIFHYIEFLFRMIKPQKVFFMAVDGVAPRAKMNQQRGRRFRSAKDAEKMELEAKKKGE 120
Query: 121 RLPTEKRFD 129
+LP +RFD
Sbjct: 121 KLPDVERFD 129
>gi|307180136|gb|EFN68180.1| 5'-3' exoribonuclease 1 [Camponotus floridanus]
Length = 1644
Score = 1035 bits (2677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/1126 (48%), Positives = 729/1126 (64%), Gaps = 46/1126 (4%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT 185
F +I + F P+KLFFMAIDGVAPRAK+NQQRGRRFR+AK+AEV E KAK KG +P
Sbjct: 64 FHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRGRRFRAAKDAEVQEAKAKAKGLEIPK 123
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPG 245
EKRFDSNCITPGT FM +L +QL+ FV+ K++ D DT WK ++ SG E PG
Sbjct: 124 EKRFDSNCITPGTLFMAKLGEQLKLFVEYKVSMD----DT-----WKKCKILFSGSEVPG 174
Query: 246 EGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN 305
EGEHKIMDYIRYMK+ DYN N RHCLYGLDADLIMLGLC+HEP FSLLREEVKF +
Sbjct: 175 EGEHKIMDYIRYMKASKDYNCNSRHCLYGLDADLIMLGLCSHEPNFSLLREEVKFGKQQV 234
Query: 306 KGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIG 365
K +TPEETKF LLHLSL+R+Y+E EF +K+ L FPF IE IIDDWVLMGFL+G
Sbjct: 235 K-----MTPEETKFCLLHLSLLREYIEHEFSPIKDK--LLFPFDIEKIIDDWVLMGFLVG 287
Query: 366 NDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQ 425
NDFIP+LP+LHI NGALP+LY+ Y EVLPTLDGYINE G L L RFEKF+ L+ D EQ
Sbjct: 288 NDFIPHLPNLHIANGALPILYRAYMEVLPTLDGYINEAGTLKLDRFEKFMENLSHLDLEQ 347
Query: 426 FREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYD----DGTEEVLNY 481
F E YAD++Y E K G++ ++ K D D+A K D D D + TE L +
Sbjct: 348 FNEHYADLKYFESKTGRRPNETERHVYKKSEDDDIAIPQKIQDKDLDAVIKNTTEMSLGH 407
Query: 482 --------ANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECY 533
+DE + EF QHK DYY KL+Y V EVLR QAE Y
Sbjct: 408 FDDDEDYNDMDTIDMDIIDDESDSDIYNMEFVQHKRDYYMNKLEYKNVDAEVLRSQAEGY 467
Query: 534 IRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLP 593
+RAIQWNL YYY+GC SWSWYYPHHYAPYISDIKDF L L++E+GEPFLPFQQLLAVLP
Sbjct: 468 VRAIQWNLGYYYHGCCSWSWYYPHHYAPYISDIKDFKDLKLEFELGEPFLPFQQLLAVLP 527
Query: 594 AASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMD 653
A SK+LLP +Q L+T E+SPI+ YYP +F TDLNGKKQ+WEAVVLIPFIDE L+ AM
Sbjct: 528 AYSKDLLPMAFQTLLTEESSPIINYYPHDFKTDLNGKKQEWEAVVLIPFIDEKLLVAAMQ 587
Query: 654 AVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHP 713
LT +E +RNRHGPM +Y YS+ T A YFP N A + RD+I+V
Sbjct: 588 PHLSKLTADEDARNRHGPMCLYMYSDEIRSTQKATIYFPEFT-NCAQLTSINRDEIFVPR 646
Query: 714 NKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPS 773
+L +GL NL+LY FP L+H+Q T +E A+VKVFQQPS E++I+ + P+
Sbjct: 647 EQLIRGLSPGFNLELYYPGFPILRHLQHTAHLERARVKVFQQPSMGENMIVSIISEETPN 706
Query: 774 LKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAK--DMQD---- 827
L +A ++LGK+++I +PHL E V V D + S S + K D++D
Sbjct: 707 LTTLASKLLGKSVYIGWPHLKEAFVIGVTDSDVKFSLINPSDGYSDNNLKKEDVKDLLAA 766
Query: 828 AFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYA 887
+ +K I + Y ++LG+D+G T VL+Y + KY FG +GKVT ++ + YA
Sbjct: 767 EWNTQRKQIKETYMSRLGIDVGETNVLLYARTYLGNKYVFGVQGKVTIEKQWSDYPTAYA 826
Query: 888 YQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVISTVK-EENSFIKLS 945
YQ+ V ++ + L YKT+ +IF PG CF L +P+YG+ G V+ + IK+S
Sbjct: 827 YQTVVKDISVYSKKLPVYKTMHDIFIPGTFCFMLGHPYYGAMGEVMQYKDYPKPRRIKIS 886
Query: 946 FKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRH 1005
K +EP + Y+ A +L IS LLSR TG+I++I +++E ++
Sbjct: 887 IKTTKEPTFEVIKQAYAQQKTRYMHGSIAAQRLGISSHLLSRITGTIYVIQTSKEEVAKY 946
Query: 1006 NIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDI 1065
N+GLN+KF++KNEE+ G+TR++ +W Y+ + + LI+NYM + P +F L + ++DI
Sbjct: 947 NVGLNLKFNKKNEEIPGYTRKE--NGQWLYSAKAIELIRNYMMKCPNLFERLAQNVTNDI 1004
Query: 1066 YLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE- 1124
+ +++F + ++ + V+WLK Q + E R CG +V+ + V IE ++ K++
Sbjct: 1005 FQEEELFNKESDE-LKDTVAWLKTQLNG-IESRACGMDIVETEFVKQIEQEIEEYLKIQN 1062
Query: 1125 -KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQG 1183
K++ + VKP L+ P L + PDP+++ +LFDR+ +R+ ++VPLG +GTIIGI +
Sbjct: 1063 IKEVFIQVKPQLLFKPGLHLRSVPPDPNSQTRLFDRIRCVRNGFSVPLGVKGTIIGIRKA 1122
Query: 1184 ETSYDAMYDVVFDKPFPHGVKIR-CSESRGYRMPAQAMINLSYGER 1228
D MYDV+FD+PF G+ + CS SRGYR+ A +N+S+GER
Sbjct: 1123 NNPADIMYDVLFDQPFIGGLTLSGCSASRGYRLAATDFVNISFGER 1168
Score = 223 bits (568), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 107/148 (72%), Positives = 121/148 (81%), Gaps = 5/148 (3%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSEV++E+QIPEFD LYLDMNGIIH CSHPND D FRI+E+ I
Sbjct: 1 MGVPKFFRYISERYPCLSEVIKEHQIPEFDYLYLDMNGIIHTCSHPND-DVCFRISEEDI 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F++IFHYIE+LF MI+P+KLFFMAIDGVAPRAK+NQQRGRRFR+AK+AEV E KAK KG
Sbjct: 60 FKNIFHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRGRRFRAAKDAEVQEAKAKAKGL 119
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDG 148
+P EKRFD C FMA G
Sbjct: 120 EIPKEKRFD----SNCITPGTLFMAKLG 143
>gi|383853936|ref|XP_003702478.1| PREDICTED: 5'-3' exoribonuclease 1-like [Megachile rotundata]
Length = 1665
Score = 1020 bits (2637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/1133 (46%), Positives = 737/1133 (65%), Gaps = 64/1133 (5%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT 185
F +I L F P+KLFF+AIDGVAPRAK+NQQRGRRFR+AK+AE+ E KA+ +G +P
Sbjct: 65 FRYIELLFRMIQPQKLFFIAIDGVAPRAKINQQRGRRFRAAKDAEIQEAKARAEGIEIPK 124
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILSGHETP 244
EKRFDSN ITPGT FM ++++ LRYFV KI++DKLW+ C VI SG E P
Sbjct: 125 EKRFDSNAITPGTAFMYKVNEHLRYFVTYKISSDKLWQK----------CKVIFSGSEVP 174
Query: 245 GEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKS 304
GEGEHKIMDYIRYMK++PDY+ + +HCLYGLDADLIMLGLCTHE +F+LLREEV ++ K
Sbjct: 175 GEGEHKIMDYIRYMKAQPDYDIHTKHCLYGLDADLIMLGLCTHELHFTLLREEVTYDKKQ 234
Query: 305 NKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLI 364
K I+TPE+TKF L H+SL+R+Y+ EF +L+E LSF + +E IIDDW+LMGFL+
Sbjct: 235 TK----ILTPEKTKFCLFHISLLREYINHEFSQLREK--LSFSYDLEKIIDDWILMGFLV 288
Query: 365 GNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFE 424
GNDFIP+LP+LHI +GAL +LY+VY +VLPTL+GYINE G L L RFEKF+ +L+SFD
Sbjct: 289 GNDFIPHLPNLHITHGALSILYEVYIDVLPTLEGYINEAGTLKLDRFEKFMERLSSFDIL 348
Query: 425 QFREKYADIQYLEGKMGKKFSD---VFHKEKS---------KEMDPDLAALIKATDDDYD 472
+F E YAD++YLEGKMG+ ++ V H++ K D A IKA D+
Sbjct: 349 KFSEHYADLKYLEGKMGRPLTETEKVNHRKSESSEQNSSPKKAQDKRFNAFIKAVDE-MS 407
Query: 473 DGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAEC 532
GTE+ L +DE + EF QHK DYY KL Y ++ + LR QAE
Sbjct: 408 IGTEDELR-----------DDESDSETYTMEFVQHKRDYYINKLKYEEIDEDFLRSQAEG 456
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVL 592
Y+ A+QWNLHYYYNGC SW+WYYPHHYAPYISDIKDF +L L++E+GEPFLPF+QLLAVL
Sbjct: 457 YVTALQWNLHYYYNGCCSWTWYYPHHYAPYISDIKDFKNLKLEFELGEPFLPFEQLLAVL 516
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAM 652
P SKELLP +Q L+T E SPI++YYP +F TDLNGK +WEAV+LIPFID +L+ AM
Sbjct: 517 PPYSKELLPSAFQPLLTEEQSPIIDYYPMDFETDLNGKTLEWEAVILIPFIDATRLVDAM 576
Query: 653 DAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVH 712
LT EE++RN+HGPM YT++ NLG A +YFP I +HA + R+D+ V
Sbjct: 577 APHYDKLTPEEKARNKHGPMYCYTHTEENLGVYKAVEYFPDII-SHAKALAINREDLIVP 635
Query: 713 PNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVP 772
KL KGLC V ++LY FPTL++++ T +E AKVKVFQ+ S ES+I+
Sbjct: 636 EEKLVKGLCPGVQIELYYPGFPTLRYIEHTATLEKAKVKVFQRQSLRESMILHLTPPSEL 695
Query: 773 SLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDK------NSGPVFERAAKDMQ 826
L +A ++LGKT+F+N+PHL E +V V+ D+++S N E +
Sbjct: 696 DLTTIASELLGKTVFVNWPHLTEAQVTGVSNCDTKLSLINPQMDYCNENINKEELKGSLV 755
Query: 827 DAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTY 886
+ + KK IT+ Y +LG++IG VLVY +P KY F K+ ++ + +
Sbjct: 756 TQWNMIKKHITETYIGRLGIEIGKINVLVYVRPFIGSKYVFSNHTKLYLEKQWSEMQTVH 815
Query: 887 AYQSAVLNLQ-QARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVIS-TVKEENSFIKL 944
AYQ+ V ++ + + YKT+D+IF PG CF L++P+YG+ G V + +++ I +
Sbjct: 816 AYQTIVKDISVHCPDVVLYKTVDDIFVPGSICFMLAHPYYGAMGKVRDPAIYKKSGRINV 875
Query: 945 SFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEE---G 1001
EP L + +Q D Y+ A +L IS LLLS+ TG+I++ S +E
Sbjct: 876 FVITMLEPSLDWVKQVQADIRTQYMQGSIAARRLGISSLLLSKITGTIYVKKSPDEFQTD 935
Query: 1002 AKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHS 1061
++NIGLN+KF++KNEE+ G+TR++ +W Y+ +V+ LI++YM + P++F L +
Sbjct: 936 DTKYNIGLNLKFTKKNEEIPGYTRKE--NGQWLYSSKVIDLIRDYMVKCPDLFERLSQNI 993
Query: 1062 SDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCE 1121
++D ++ +++F ++ ++ I++WLKEQ E R CG +D VV IE VD
Sbjct: 994 TNDFFMEENLF-NKDTGEMSDIMAWLKEQLQG-VENRACGVEALDPSVVKNIEEEVDAFL 1051
Query: 1122 KVE----KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTI 1177
K + + + + VKP+ L+ P L + PDP + +L DR+ +++ +TVPLGY+GT+
Sbjct: 1052 KTQNNTNRIVEMQVKPHLLFKPDLHLRNVPPDPKAQTRLLDRICCVKENFTVPLGYKGTV 1111
Query: 1178 IGIVQGETSYDAMYDVVFDKPFPHGVKI-RCSESRGYRMPAQAMINLSYGERL 1229
IG+ + E D MYDVVFDK F G + CSE RGYR+ IN+SYG+R+
Sbjct: 1112 IGLQKMENFLDTMYDVVFDKTFVGGFSVGGCSEFRGYRLGPTDFINISYGQRI 1164
Score = 217 bits (552), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 94/129 (72%), Positives = 116/129 (89%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKF+RYISERYPCL+E ++E+Q+PEFDNLYLD+NGIIH CSHPND + FRITE+ I
Sbjct: 1 MGIPKFYRYISERYPCLNETLKEHQMPEFDNLYLDVNGIIHGCSHPNDAEVSFRITEEDI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F++IF YIE+LFRMIQP+KLFF+AIDGVAPRAK+NQQRGRRFR+AK+AE+ E KA+ +G
Sbjct: 61 FKNIFRYIELLFRMIQPQKLFFIAIDGVAPRAKINQQRGRRFRAAKDAEIQEAKARAEGI 120
Query: 121 RLPTEKRFD 129
+P EKRFD
Sbjct: 121 EIPKEKRFD 129
>gi|340729609|ref|XP_003403090.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like [Bombus
terrestris]
Length = 1626
Score = 1014 bits (2623), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/1160 (46%), Positives = 747/1160 (64%), Gaps = 67/1160 (5%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT 185
F +I + F P+KLFF+A+DGVAPRAK+NQQR RRF++AK+A++ E KAK KG LP
Sbjct: 65 FHYIEVLFRMIQPQKLFFIAVDGVAPRAKINQQRSRRFKNAKDAKIQEDKAKIKGTTLPK 124
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILSGHETP 244
EKRFDSNCITPGT FM +L +QL+YF+ KI+TDKLW+ C VI SG + P
Sbjct: 125 EKRFDSNCITPGTVFMSKLDEQLKYFITYKISTDKLWQK----------CKVIFSGSQVP 174
Query: 245 GEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKS 304
GEGEHKIMDYIRYMK++ +Y+ N +HCLYGLDADLIMLGLCTHE +F+LLREEV F K
Sbjct: 175 GEGEHKIMDYIRYMKTQANYDVNTKHCLYGLDADLIMLGLCTHEVHFTLLREEVTFGKKQ 234
Query: 305 NKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLI 364
K +TPEETKF L HLSL+R+Y+ EF LKE L FP+++ENIIDDW+LMGFLI
Sbjct: 235 XK---VCLTPEETKFCLFHLSLLREYINHEFSSLKEK--LPFPYNLENIIDDWILMGFLI 289
Query: 365 GNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFE 424
GNDFIP+LP+LHI++GAL +LY+VY +V+PTLDGYINE G L L RFEKF+ +L+ FD
Sbjct: 290 GNDFIPHLPNLHIVHGALSVLYQVYMDVMPTLDGYINETGTLRLDRFEKFMERLSRFDTL 349
Query: 425 QFREKYADIQYLEGKMGKKFSDVFHKEKS----------KEMDPDLAALIKATDDDYDDG 474
QF E YAD++YLE K G+ ++ + ++S K D + AL+++ D
Sbjct: 350 QFSEYYADLKYLESKTGRTETENSNDKRSGSTEETRSPRKMQDKEFDALLRSAAD----- 404
Query: 475 TEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYI 534
++ Y++ Y D+ + + EF Q K DYY KL Y + + LR QAE Y+
Sbjct: 405 ----MSTGKYDDDEYGDDKSDCEM-YTMEFVQCKKDYYINKLKYENIDEDFLRSQAEGYV 459
Query: 535 RAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPA 594
RAIQWNL+YYYNGC SWSWYYPHHYAPYISDIKDF L L++++GEPFLPF+QLLAVLP+
Sbjct: 460 RAIQWNLNYYYNGCCSWSWYYPHHYAPYISDIKDFKDLKLEFDLGEPFLPFEQLLAVLPS 519
Query: 595 ASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDA 654
SK+LLP +Q L+T + SPI++YYP F TDLNGK+Q+WEAVVLIPFI+E ++ AM
Sbjct: 520 YSKDLLPPAFQTLLTEDQSPIIKYYPTNFETDLNGKEQEWEAVVLIPFINEKDIVDAMAP 579
Query: 655 VEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN 714
+T EER+RNRHGPM ++TY+ NLG AP+YFP I NHA + + R+DI V
Sbjct: 580 HYPQITPEERARNRHGPMCLFTYTEENLGAYKAPEYFPDI-INHAKVELINREDIAVPRE 638
Query: 715 KLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSL 774
KL +GL V L +Y F TL++++ T +E AKVKVFQ+ SR ES+I+ L
Sbjct: 639 KLVRGLSPGVKLDVYYPGFSTLQYIKHTASLEKAKVKVFQRHSRRESMILHIKPQSNIDL 698
Query: 775 KQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKK 834
+ ++LGKT+++N+PHL E V V+ ++ NS F+ + + + KK
Sbjct: 699 TTIGSKLLGKTVYVNWPHLKEGLVIGVSESSRKM----NSVNQFDNTN---ETEWNVWKK 751
Query: 835 SITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLN 894
+T+ Y LGVDIG+T+ LV+ + + +KY F +GKV ++ + YAYQ+ V +
Sbjct: 752 RVTEMYKDHLGVDIGDTKFLVHVRLLVGKKYIFNAQGKVNIEKHWTEMPTCYAYQTIVKD 811
Query: 895 LQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVI-STVKEENSFIKLSFKVQQEP 952
+ +++ YKT+ +IF PG CF L++P+YG+ G V S V + + IK+S +EP
Sbjct: 812 ITTYCNNVQLYKTVSDIFEPGTVCFMLAHPYYGAMGKVHESAVCKNSGRIKVSVTTMREP 871
Query: 953 DLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAK---RHNIGL 1009
+ +Q D Y+ + +L IS LLLSR TGSIF+ S+ E + R+NIG
Sbjct: 872 SFEAIKQIQADLQTQYMHGSVASQRLGISSLLLSRITGSIFVKQSSNELQQDDVRYNIGF 931
Query: 1010 NIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRD 1069
N+KF++KN E+ G+TR+ E +W+Y+ +V+ LI +YM + P +F L + + I+ D
Sbjct: 932 NLKFNKKNAEIPGYTRKVELG-QWYYSPKVLDLIHSYMLRCPTLFERLAQNPTTCIFQED 990
Query: 1070 DVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD----TCEKVEK 1125
D+F +G + + V+WLK+Q H E R CG +++ ++ +E VD + + K
Sbjct: 991 DLFT-KGSEELTDTVAWLKDQLHG-IESRACGREIIENTIMEKLEEIVDAYLESPNSIGK 1048
Query: 1126 QITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGET 1185
+ + V+P LY P + L PDP T+ +L DR+ +I+D +TVPLGY+GTIIGI + E
Sbjct: 1049 IVDMQVQPYLLYTPTLRIKNLPPDPKTQTQLLDRICSIKDNFTVPLGYKGTIIGIQKMEN 1108
Query: 1186 SYDAMYDVVFDKPFPHGVKIR-CSESRGYRMPAQAMINLSYGERLCGN--------SNPH 1236
+ D MYDV+FDKP GV I SE R YR+ IN+SYG+R+ S
Sbjct: 1109 TLDTMYDVLFDKPIIGGVSINGSSEFRAYRLSVFDFINISYGQRIEQGKGTQMNIESTEQ 1168
Query: 1237 VKNINVMQSRGERNTNYAQV 1256
KNI + + TN + V
Sbjct: 1169 WKNIMAINQNAQSRTNASNV 1188
Score = 217 bits (553), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 117/129 (90%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISERYPCL+E +++YQIPEFDNLYLD+NGIIH+CSHP+D D FRI+E+ I
Sbjct: 1 MGIPKFFRYISERYPCLTEKLKDYQIPEFDNLYLDVNGIIHDCSHPDDMDITFRISEETI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F++IFHYIE+LFRMIQP+KLFF+A+DGVAPRAK+NQQR RRF++AK+A++ E KAK KG
Sbjct: 61 FKNIFHYIEVLFRMIQPQKLFFIAVDGVAPRAKINQQRSRRFKNAKDAKIQEDKAKIKGT 120
Query: 121 RLPTEKRFD 129
LP EKRFD
Sbjct: 121 TLPKEKRFD 129
>gi|350402247|ref|XP_003486419.1| PREDICTED: 5'-3' exoribonuclease 1-like [Bombus impatiens]
Length = 1628
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/1161 (45%), Positives = 741/1161 (63%), Gaps = 67/1161 (5%)
Query: 127 RFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTE 186
R+ + + P+KLFF+A+DGVAPRAK+NQQR RRF++AK+A++ E KAK KG LP E
Sbjct: 66 RYIEVLFRMIQPQKLFFIAVDGVAPRAKINQQRSRRFKTAKDAKIQEDKAKVKGTILPKE 125
Query: 187 KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILSGHETPG 245
KRFDSNCITPGT FM +L +QL+YF+ KI+TDKLW+ C VI SG + PG
Sbjct: 126 KRFDSNCITPGTVFMSKLDEQLKYFITYKISTDKLWQK----------CKVIFSGSQVPG 175
Query: 246 EGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN 305
EGEHKIMDYIRYMK++ +Y+ N +HCLYGLDADLIMLGLCTHE +F+LLREE+ F K
Sbjct: 176 EGEHKIMDYIRYMKTQANYDVNTKHCLYGLDADLIMLGLCTHEIHFTLLREELTFGKKQK 235
Query: 306 KGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIG 365
K +TPEETKF L HLSL+R+Y+ EF LKE L FP+++ENIIDDW+LMGFLIG
Sbjct: 236 K---VCLTPEETKFCLFHLSLLREYINHEFSSLKEK--LPFPYNLENIIDDWILMGFLIG 290
Query: 366 NDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQ 425
NDFIP+LP+LHI++GAL +LY+VY++V+PTLDGYINE G L L RFEKF+ +L+ FD Q
Sbjct: 291 NDFIPHLPNLHIVHGALSVLYQVYKDVMPTLDGYINETGTLRLDRFEKFMERLSRFDTLQ 350
Query: 426 FREKYADIQYLEGKMGKKFSDVFH------------KEKSKEMDPDLAALIKATDDDYDD 473
F E YAD++YLE K G+ ++ + + K D + AL+++ D
Sbjct: 351 FSEYYADLKYLESKTGRPLTETENSNDKRSGSSEETRSPRKMQDKEFDALLRSAAD---- 406
Query: 474 GTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECY 533
++ Y++ + D+ + + EF Q K DYY KL Y + LR QAE Y
Sbjct: 407 -----MSTGKYDDDEFGDDKSDCEM-YTMEFVQCKKDYYINKLKYENIDENFLRSQAEGY 460
Query: 534 IRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLP 593
+RAIQWNL+YYYNGC SWSWYYPHHYAPYISDIKDF L L++++GEPFLPF+QLLAVLP
Sbjct: 461 VRAIQWNLNYYYNGCCSWSWYYPHHYAPYISDIKDFKDLKLEFDLGEPFLPFEQLLAVLP 520
Query: 594 AASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMD 653
+ SK+LLP +Q L+T + SPI++YYP F TDLNGK+Q+WEAVVLIPFI+E ++ AM
Sbjct: 521 SYSKDLLPPAFQTLLTEDQSPIIKYYPTNFETDLNGKEQEWEAVVLIPFINEKDIVDAMA 580
Query: 654 AVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHP 713
+T EER+RN+HGPM ++TY+ NLG AP YFP I NHA + + R+DI V
Sbjct: 581 PRYPQITPEERARNKHGPMCLFTYTEENLGAYKAPQYFPDII-NHAKVQLINREDIAVPR 639
Query: 714 NKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPS 773
KL +GLC V L +Y F TL++++ T +E AKVKVFQ+ SR ES+I+
Sbjct: 640 EKLVRGLCPGVKLDVYYPGFSTLQYIEHTASLEQAKVKVFQRQSRRESMILHIKPQSNID 699
Query: 774 LKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSK 833
L + ++LGKT+++N+PHL E V V+ ++ NS F+ + + + K
Sbjct: 700 LTTIGSKLLGKTVYVNWPHLKEGLVIGVSESSRKM----NSVNQFDNIN---ETEWNVWK 752
Query: 834 KSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVL 893
K IT+ Y LGVDIG+T+ LV+ + + +KY F +GKV ++ + YAYQ+ V
Sbjct: 753 KRITEMYKDHLGVDIGDTKFLVHIRLLVGKKYIFDAQGKVNIEKHWTEMPTCYAYQTIVK 812
Query: 894 NLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVI-STVKEENSFIKLSFKVQQE 951
++ +++ YKT+ +IF PG CF L++P+YG+ G V S + +++ IK+S +E
Sbjct: 813 DITTYCNNVQSYKTVSDIFEPGTVCFMLAHPYYGAMGKVHESAICKKSGRIKVSVTTMRE 872
Query: 952 PDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAK---RHNIG 1008
P + +Q D Y+ + +L IS LLLSR TG+IF+ S+ E + +NIG
Sbjct: 873 PSFEAIKQIQADLQTQYMHGSVASQRLGISSLLLSRITGTIFVKQSSNELQQDDVTYNIG 932
Query: 1009 LNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLR 1068
N+KF++KN E+ G+TR+ E +W+Y+ + + LI++YM + P +F L + I+
Sbjct: 933 FNLKFNKKNAEIPGYTRKGELG-QWYYSPKALDLIRSYMLRCPTLFERLAQNPITCIFKE 991
Query: 1069 DDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD----TCEKVE 1124
+D+F +G + + V+WLK+Q H E R CG +++ ++ +E VD + +
Sbjct: 992 EDLFT-KGSEELTDTVAWLKDQLHG-IESRACGREIIENTIMKNLEEIVDAYLESPNSIG 1049
Query: 1125 KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGE 1184
K + + V+P LY P + L PDP T+ +L DR+ I+D +TVPLGY+GTIIGI + E
Sbjct: 1050 KIVDMQVQPYLLYTPTLRITNLPPDPKTQTQLLDRICCIKDNFTVPLGYKGTIIGIQKME 1109
Query: 1185 TSYDAMYDVVFDKPFPHGVKIR-CSESRGYRMPAQAMINLSYGERLCGN--------SNP 1235
+ D MYDV+FDKP G I SE R YR+ IN+SYG+R+ S
Sbjct: 1110 NTLDTMYDVLFDKPIIGGFSINGSSEFRAYRLSVLDFINISYGQRIEQGKGTQMNIESTE 1169
Query: 1236 HVKNINVMQSRGERNTNYAQV 1256
KNI + + TN + V
Sbjct: 1170 QWKNIMAINQDAQSRTNASNV 1190
Score = 215 bits (547), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/129 (72%), Positives = 116/129 (89%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISERYPCL+E +++YQIPEFDNLYLD+NGIIH+CSHP+D D FRI+E+ I
Sbjct: 1 MGIPKFFRYISERYPCLTEKLKDYQIPEFDNLYLDVNGIIHDCSHPDDTDITFRISEETI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F++IF YIE+LFRMIQP+KLFF+A+DGVAPRAK+NQQR RRF++AK+A++ E KAK KG
Sbjct: 61 FKNIFRYIEVLFRMIQPQKLFFIAVDGVAPRAKINQQRSRRFKTAKDAKIQEDKAKVKGT 120
Query: 121 RLPTEKRFD 129
LP EKRFD
Sbjct: 121 ILPKEKRFD 129
>gi|289577074|ref|NP_957327.2| 5'-3' exoribonuclease 1 [Danio rerio]
Length = 1697
Score = 983 bits (2542), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/1129 (45%), Positives = 732/1129 (64%), Gaps = 53/1129 (4%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEEKIKKALEKGEVLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RL +QL+YFV K++TDK W+ V V LSGHETPGEGEHK
Sbjct: 130 SNCITPGTDFMARLQEQLKYFVHNKLSTDK---------TWQGVNVYLSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR +KP +NPN RHCLYGLDADLIMLGL +HEP+FSLLREEV+F K K +
Sbjct: 181 IMEFIRSESTKPGHNPNTRHCLYGLDADLIMLGLTSHEPHFSLLREEVRFGGK--KSQKR 238
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
I PEET F LLHLSLMR+Y++ EF +L++ +SF + +E IIDDWVLMGFL+GNDFIP
Sbjct: 239 ITAPEETTFHLLHLSLMREYIDYEFSELRKK--ISFEYDLERIIDDWVLMGFLVGNDFIP 296
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY+ Y VLP+L GY+NE G+LNL FEK+L KL+ FD E F E +
Sbjct: 297 HLPHLHINHDALPLLYRTYINVLPSLGGYLNENGHLNLTHFEKYLEKLSDFDREHFSEVF 356
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYD----DGTEEVLNYANYEE 486
D+++ E K+G K+ + ++E D K++DD DG + + A E
Sbjct: 357 VDLKWFESKVGNKYVNEAAGLAAEEADGRDLKKSKSSDDSLCLAALDGVRDSHSTAGRAE 416
Query: 487 YYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYN 546
++ED E F +EF Q+K YY K+ V++E L +QA+CY+ IQW LHYYY+
Sbjct: 417 G--AEEDGEDDDMFETEFRQYKRTYYMTKMGVEVVSDEFLANQAKCYVEGIQWILHYYYH 474
Query: 547 GCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQN 606
G SWSWYYP+HYAP++SD+++ S L+L +++ +PF+PF+QLLAVLP+ASK+LLP+ YQ+
Sbjct: 475 GVQSWSWYYPYHYAPFLSDVRNISGLSLTFDLAKPFMPFEQLLAVLPSASKDLLPQCYQH 534
Query: 607 LMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSR 666
LMT +SPI+EYYP++F TDLNGK+Q+WEAVVLIPFIDE L+ AM+ H LT E++R
Sbjct: 535 LMTSLSSPIVEYYPQDFKTDLNGKQQEWEAVVLIPFIDEKCLLAAMEPYTHNLTPSEKAR 594
Query: 667 NRHGPMLVYTYSNVNLG---TALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQD 723
NRH VY Y +L + P FP I HA + P+ D V P+ +R C+
Sbjct: 595 NRHTECAVYCYDK-DLDYPYNSPDPQIFPNIVHCHARQTPVPMDAWRVSPDHVR---CRI 650
Query: 724 VNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQIL 782
LY FPTL+H++ + + V VFQQ SR E++I+ + ++ +++VA +L
Sbjct: 651 DRGALYFCGFPTLQHIRHKFYKKKSGVMVFQQSSRGENMILDILPSHEMVQVEEVAALVL 710
Query: 783 GKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP------------VFERAAKDMQDAFQ 830
G+++F+N+PHL+E RV AV+ +++ S ++ +G R Q +
Sbjct: 711 GRSLFVNWPHLMEARVVAVSDGETKFSLEEPAGSQVLYMENNPPPTKVSRVTDKEQKDWV 770
Query: 831 LSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQS 890
+ +T+ + + G+ I T+VLVYGQ + RKY G GKV ++ F + + + YQ+
Sbjct: 771 KEVQGLTEHFSKRKGIAINETDVLVYGQLLTGRKYVIGQNGKVHLEKQFAKQVLPFPYQT 830
Query: 891 AVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCV--ISTVKEENSFIKLSFK 947
V +++ SL +KT++E+F G F + NP+YG+ G V S V E +++ F
Sbjct: 831 IVKDIKAFDSSLARFKTLEELFPLGTTVFMVGNPYYGAMGEVQDSSDVISEGR-VRVVFS 889
Query: 948 VQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEE---GAKR 1004
V EP L L+ Q Y P Y +AS+L I+ L+SRF+GSIFI +++ G ++
Sbjct: 890 VPCEPQLDALIQNQHKYSVKYSPGYVLASRLGITGYLVSRFSGSIFIGRGSKKNPHGEQK 949
Query: 1005 HNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDD 1064
N+GLN+KF++KNEEV G+T+R T K+W Y+ V LI Y+++F EVF + +S DD
Sbjct: 950 VNVGLNLKFNKKNEEVPGYTKR--TEKEWLYSAAVEELIAEYLERFSEVFDHVARNSHDD 1007
Query: 1065 IYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD--T 1119
I+ DD++P + G ++V +I WLK P + C ++DA +V IE ++
Sbjct: 1008 IFYEDDIWPGEDENGVEKVQEIQGWLKTHPVSSISRASCDLQILDAGIVEKIEEELEKTK 1067
Query: 1120 CEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIG 1179
+K+ K++ + VKP+ L+ P + PDPD+++ LFDRVVN+R+ ++VPLG RGTIIG
Sbjct: 1068 AKKMNKKVRVTVKPHLLFRPLEQQHGVVPDPDSEYHLFDRVVNVRESFSVPLGLRGTIIG 1127
Query: 1180 IVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
I + + +Y+V+FD+ F G+ IRCS RGYR+P A+INLS+G R
Sbjct: 1128 IKGADREAEILYEVIFDEEFAGGLTIRCSPGRGYRLPPSALINLSHGSR 1176
Score = 232 bits (592), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/129 (80%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND D HFRI+E++I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDEDVHFRISEEKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEEKIKKALEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 VLPTEARFD 129
>gi|307194446|gb|EFN76744.1| 5'-3' exoribonuclease 1 [Harpegnathos saltator]
Length = 1642
Score = 979 bits (2532), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/1138 (46%), Positives = 738/1138 (64%), Gaps = 63/1138 (5%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT 185
F +I + F P+KLFFMAIDGVAPRAK+NQQR RRFR+AK+AEV E AK G +PT
Sbjct: 65 FHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRSRRFRTAKDAEVQEANAKIHGLVIPT 124
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPG 245
EK+FDSNCITPGT FM L ++L F+ KI+ D DT WK V+ SG E PG
Sbjct: 125 EKKFDSNCITPGTFFMAELTRRLNRFIVHKISID----DT-----WKKCKVLFSGSEVPG 175
Query: 246 EGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN 305
EGEHKIMD+IR+MK+ DY+ N RHCLYGLDADLIMLGLC+HEP FSLLREEVKF K
Sbjct: 176 EGEHKIMDFIRHMKASKDYDFNSRHCLYGLDADLIMLGLCSHEPNFSLLREEVKFGKKQK 235
Query: 306 KGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIG 365
K I TPEETKF LLHLSL+R+Y++ EF +K+ +SFP+ IE IIDDWVLMGFL+G
Sbjct: 236 K----IQTPEETKFCLLHLSLLREYIDHEFSPVKDK--ISFPYDIEKIIDDWVLMGFLVG 289
Query: 366 NDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQ 425
NDFIP+LP+LHI +GALP+LY+ Y EVLPT +GYINE G LNL RFEKF+ +L+ D +Q
Sbjct: 290 NDFIPHLPNLHITSGALPILYRAYMEVLPTFEGYINETGTLNLNRFEKFMERLSRLDVKQ 349
Query: 426 FREKYADIQYLEGKMGKKFSD----VFHKEKSKE-------MDPDLAALIKATDDDYDDG 474
F E YAD++Y E K G+K ++ ++ K + E + DL ALIK+T
Sbjct: 350 FNEHYADLKYFESKTGRKPNEFERHIYKKSEDGEATSPKKIQNKDLDALIKST------- 402
Query: 475 TEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYI 534
E L +++ ++ +DE + EF QHK DYY KL+Y V + LR QAE Y+
Sbjct: 403 AEMSLGHSDEDDDLDMMDDESDSDIYHMEFVQHKRDYYMNKLEYKNVDADFLRSQAEGYV 462
Query: 535 RAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPA 594
RAIQWNLHYYYNGC SWSWYYPHHYAPYISDIKDF L L++E+GEPFLPF+QLLAVLPA
Sbjct: 463 RAIQWNLHYYYNGCCSWSWYYPHHYAPYISDIKDFKDLKLEFELGEPFLPFEQLLAVLPA 522
Query: 595 ASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDA 654
SK+LLP +Q+L+ ++SPI+ YYP +F TDLNGK+Q+WEAVVLIPFIDE L+ AM
Sbjct: 523 YSKDLLPVTFQSLLVEKDSPIISYYPTDFKTDLNGKQQEWEAVVLIPFIDEKLLLAAMQP 582
Query: 655 VEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN 714
LT EE+ RN HG M +Y+Y++ +LG A +F I NHA + RDDI++
Sbjct: 583 HLSKLTPEEKQRNAHGQMRLYSYTDEDLGVCEATSHFSKII-NHAQVTLISRDDIFLPKE 641
Query: 715 KLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPS 773
+L +GL ++ +Y FP L+H+ T + A VKVFQQPSR E++I+ + ++
Sbjct: 642 QLIRGLSPGFDINVYYPGFPKLQHIPHTASLTKADVKVFQQPSRVENMILHILEQNSPQD 701
Query: 774 LKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISF-----DKNSGPVFERAAKDMQDA 828
L+ +A Q+LGK +++N+P+L E V V+ + + + D + V + +
Sbjct: 702 LENLAPQLLGKIVYVNWPYLKEALVIGVSNNNVKFTLIEALVDYSHDNVSKEDVSTTE-- 759
Query: 829 FQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAY 888
+ + KK I++ Y ++LG+ IG+T++L+Y +P+ S KY F G++T ++ + + V YAY
Sbjct: 760 WNIQKKHISETYMSRLGISIGHTDILLYARPLLSTKYVFNTNGELTLEKQWAKLAVPYAY 819
Query: 889 QSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVI--STVKEENSFIKLS 945
Q+ V N+ +S YK++ +IF PG CF L PHY + G V+ T + I++S
Sbjct: 820 QTVVRNIPVYYKSEPLYKSMYDIFVPGSICFMLGYPHYSAIGEVLPHGTDNTKQHRIQIS 879
Query: 946 FKVQQEP--DLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEE-GA 1002
V +EP ++ +H Q T Y+ A +L IS LLSR TG+I++I ++ E
Sbjct: 880 MTVTKEPTFEIVKQIHAQQKT--RYMHGSIAAQRLGISSHLLSRITGTIYVIRTSNELEV 937
Query: 1003 KRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSS 1062
+ NIGLN+KF++KNEEV G+T+++ + +W Y+ + + LI++YM + P +F L + +
Sbjct: 938 TKLNIGLNLKFNKKNEEVPGYTKKENS--QWLYSIRAIELIRSYMVKCPNLFERLAVNVT 995
Query: 1063 DDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHA----VD 1118
+DI+ +++F + ++ + IV+WLK + E R CG VD +VV +E ++
Sbjct: 996 NDIFQEEELFDKKSDE-LENIVAWLKMELR-DIESRACGIEAVDTEVVQQMEEELKQYLN 1053
Query: 1119 TCEKVEKQITLFVKPNKLYIPKPTLDKLC-PDPDTKFKLFDRVVNIRDCYTVPLGYRGTI 1177
T K +T+ VKP+ L+ P+ + PDP +L DR+ +R +TVP+G +GTI
Sbjct: 1054 TQSANSKTVTMQVKPHLLFKPELHFRNMVPPDPHALHRLLDRIRCVRRGFTVPIGAKGTI 1113
Query: 1178 IGIVQGETSYDAMYDVVFDKPFPHGVKIR-CSESRGYRMPAQAMINLSYGERL-CGNS 1233
IGI + D M+DV+FD+PF G I CSESRGYR+ +N+S+GER+ GNS
Sbjct: 1114 IGIQKANIQVDTMFDVLFDQPFIGGFSINGCSESRGYRLAITDFLNISHGERIEHGNS 1171
Score = 222 bits (565), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/145 (70%), Positives = 118/145 (81%), Gaps = 4/145 (2%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISER+PCLSE ++EYQ+PEFD LYLDMNGI+H CSHPND+D HFRI+E I
Sbjct: 1 MGVPKFFRYISERHPCLSETIKEYQMPEFDYLYLDMNGIVHACSHPNDSDVHFRISEDTI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F +IFHYIE+LF MI+P+KLFFMAIDGVAPRAK+NQQR RRFR+AK+AEV E AK G
Sbjct: 61 FNNIFHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRSRRFRTAKDAEVQEANAKIHGL 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMA 145
+PTEK+FD C FFMA
Sbjct: 121 VIPTEKKFD----SNCITPGTFFMA 141
>gi|405973506|gb|EKC38214.1| 5'-3' exoribonuclease 1 [Crassostrea gigas]
Length = 1857
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/1168 (45%), Positives = 730/1168 (62%), Gaps = 60/1168 (5%)
Query: 121 RLPTEKRFD--FITLKFCF----PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQ 174
R+ EK F F L+F F P+K+FFMAIDGVAPRAKMNQQRGRRFRSA+EAE LE+
Sbjct: 54 RITEEKIFKDIFHYLEFLFRMIKPRKVFFMAIDGVAPRAKMNQQRGRRFRSAREAEALER 113
Query: 175 KAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDV 234
KA+E GE LPTEKRFDSNCITPGT FM +LH+QL+YFV KI++D LW V
Sbjct: 114 KARESGETLPTEKRFDSNCITPGTEFMVKLHEQLKYFVTSKISSDPLWHG---------V 164
Query: 235 CVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLL 294
V LSGHETPGEGEHK+MD+IR KSKPDY+ N RHCLYGLDADL+MLGL THEP+FSLL
Sbjct: 165 DVYLSGHETPGEGEHKVMDFIRCQKSKPDYDANTRHCLYGLDADLMMLGLATHEPHFSLL 224
Query: 295 REEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENII 354
REEV+F K ++ + TPEET F LLHLSL R+YL+ EF LK+ L F +S+ENII
Sbjct: 225 REEVRFGGKKDRN-KRPATPEETTFHLLHLSLFREYLDFEFSFLKDK--LPFGYSLENII 281
Query: 355 DDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKF 414
DDW+LMGFL+GNDFIP+LP LHI + ALPLL+K Y +LP GY+NEGG+LNL+RF+++
Sbjct: 282 DDWILMGFLVGNDFIPHLPHLHIQHDALPLLWKTYMTILPECGGYMNEGGHLNLERFDRY 341
Query: 415 LTKLASFDFEQFREKYADIQYLEGKMGKKFSDV---FHKEKSKEMDPDLAALIKATDDDY 471
+ +LA FD ++F E + D+++ EGK ++ + K+K+ + + L+++ D+
Sbjct: 342 MKELAKFDLDKFSEVFTDLKWFEGKTAERSEKEQMEGNSRKNKKDNLNQFLLLESLDNSE 401
Query: 472 DDG----TEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLR 527
+G +E E +EDE+ F EF HK +YY KL+Y V +VLR
Sbjct: 402 VEGQPSENQEKAQLDEDTEDLAEEEDED-SDTFDEEFRLHKRNYYMTKLEYEDVDKQVLR 460
Query: 528 DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQ 587
DQ E Y+RAIQW L YY+ G SWSW+YPHHYAP+ISD+ DF + +K+EMG PFLPFQQ
Sbjct: 461 DQCEEYVRAIQWILLYYFEGVPSWSWFYPHHYAPFISDVTDFKDMEIKFEMGSPFLPFQQ 520
Query: 588 LLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVK 647
L+AVLPAASKELLPEPYQ LMT + SP++++YP +F TDLNGK+Q+WEAVVLIPFIDE +
Sbjct: 521 LMAVLPAASKELLPEPYQKLMTQDISPVIDFYPVDFQTDLNGKQQEWEAVVLIPFIDEAR 580
Query: 648 LIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNL--GTALAPDYFPAINENHAVEKPLY 705
L++AM +VE+ L+ E+ RN HGP L+Y Y+ L T+ P F I NHA + L
Sbjct: 581 LLEAMKSVENQLSPSEKKRNAHGPCLLYDYTPDTLEPCTSTLPGVFQDIINNHARLRELG 640
Query: 706 RDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESII-- 763
D V P+K+ KGL V L +Y FPTLKH+ ++ VKVFQ SRNE+++
Sbjct: 641 VDAFRVDPDKMVKGLMPQVRLDVYFPGFPTLKHIPHKAFLKKEGVKVFQMNSRNENMMLE 700
Query: 764 IVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISF-----DKNSGPVF 818
I++D + ++ VA+ +LG T ++ +PHL E +V V+ R GP
Sbjct: 701 ILEDPDKPVDIEDVAETLLGNTTYVGWPHLFEAKVVQVSNDTDRYVLVEAHQKGGEGPKV 760
Query: 819 ERAAKDMQ-----DAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKV 873
+ K++ + +Q SI + Y+ +LGV IGNT VL+ P+ R + G G +
Sbjct: 761 KEIVKEVLNNSECNIWQKEVSSIKERYHDRLGVVIGNTSVLLKALPMNGRTFVCGSHGVI 820
Query: 874 TQQRTFIRSTVTYAYQSAVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCVI 932
T Q+ F ++ V + YQ+ V ++ S +YKT+ E+F G F L PHYG G V+
Sbjct: 821 TLQKQFSQNPVPFVYQATVKDISVHDPSFCQYKTLSELFPVGEVAFMLGWPHYGCQGEVL 880
Query: 933 STVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYN--YLPSYTVASKLSISPLLLSRFTG 990
+ E+ ++++ +EP+L+ D YN Y S+ A L I LSR TG
Sbjct: 881 DVEEGESPRVRINVTTLEEPNLA---KFNDTERYNQQYYTSFQAAQWLGIGSHFLSRITG 937
Query: 991 SIFIIDSTEEGAKRH---NIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYM 1047
IFI + K NIGLN+KF++K EE+ G+TR T + W Y+++ + Y+
Sbjct: 938 CIFIKPGSRANPKDAHMVNIGLNLKFTKKCEEIPGYTRL--TPEGWLYSQKASDTVLEYL 995
Query: 1048 KQFPEVFGFLK--DHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVV 1105
++FPE++ + D +D+ +D+F + E + +V ++K P ++ + + GA V+
Sbjct: 996 EKFPELWDIVANMDREKNDVIYEEDIFKNLRET-MENVVEYVKSLPCSQIKPQKVGANVL 1054
Query: 1106 DAKVVSLIEHAVDTCEKVEKQITLF------VKPNKLYIPKPTLDKLCPDPDTKFKLFDR 1159
D VV I+ T + K+ VKP LY P + PDP ++++FDR
Sbjct: 1055 DEGVVQAIQKEAQTINERNKKKMNVKKVKMQVKPYLLYKPLIIQGGVVPDPTVQYEMFDR 1114
Query: 1160 VVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQA 1219
VVN+R Y+VP G RGT++GI +GE DA+YD++FD+ FP G+ IR S RGYR+ + A
Sbjct: 1115 VVNVRTGYSVPFGLRGTVVGIQKGEKDADAIYDIIFDEEFPGGIVIRGSSERGYRLQSAA 1174
Query: 1220 MINLSYGERLCGNSNPHVKNINVMQSRG 1247
MIN+++G R G + Q RG
Sbjct: 1175 MINITHGCRKNGAAKDQRSQTAQEQQRG 1202
Score = 243 bits (619), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 106/129 (82%), Positives = 122/129 (94%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R++SERYPCLSE V+EYQIPEFDNLYLDMNGIIH CSHP D++PHFRITE++I
Sbjct: 1 MGVPKFYRWVSERYPCLSETVKEYQIPEFDNLYLDMNGIIHVCSHPEDDNPHFRITEEKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F+DIFHY+E LFRMI+P+K+FFMAIDGVAPRAKMNQQRGRRFRSA+EAE LE+KA+E GE
Sbjct: 61 FKDIFHYLEFLFRMIKPRKVFFMAIDGVAPRAKMNQQRGRRFRSAREAEALERKARESGE 120
Query: 121 RLPTEKRFD 129
LPTEKRFD
Sbjct: 121 TLPTEKRFD 129
>gi|126338146|ref|XP_001364729.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Monodelphis domestica]
Length = 1700
Score = 967 bits (2501), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/1143 (45%), Positives = 727/1143 (63%), Gaps = 81/1143 (7%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFR+AKEAE +KA EKGE LP+E RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRAAKEAEDKIKKALEKGEILPSEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI++DK W+ V + LSGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISSDK---------SWQGVTIYLSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K KPD++PN+RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKGKPDHDPNIRHCLYGLDADLIMLGLTSHESHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LK+ +SF + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKDK--ISFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY+ Y VLP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYRTYMTVLPELGGYINENGHLNLPRFEKYLIKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFH-------------KEKSKEMDPDLAALIKATDDDYDDGTEE 477
D+++ E K+G K+ + K K +E LAAL D EE
Sbjct: 356 VDLKWFESKVGNKYLNEAAGIAAEEAKNYKQKKLKGQENSMCLAAL--------DKTKEE 407
Query: 478 VLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAI 537
V+ + E D+D F +EF Q+K YY K+ V+++ L DQAECY++AI
Sbjct: 408 VMTSKSVIEDEPEDDDL-----FETEFRQYKRTYYMTKMGVEIVSDDFLADQAECYVQAI 462
Query: 538 QWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASK 597
QW LHYYY+G SWSWYYP+HYAPY+SDI++ S L +++E+G+PF+PF+QLLAVLPAASK
Sbjct: 463 QWILHYYYHGVQSWSWYYPYHYAPYLSDIRNISELKIQFELGKPFMPFEQLLAVLPAASK 522
Query: 598 ELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEH 657
+LLP YQ+LMT E SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM++
Sbjct: 523 DLLPGCYQHLMTSEESPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLQAMESCHK 582
Query: 658 LLTDEERSRNRHGPMLVYTYSNVNLGTALA--PDYFPAINENHAVEKPLYRDDIYV--HP 713
L +EE RNRH L+Y + + L+ P+ FP I + HA K + D +V +
Sbjct: 583 YLREEEEKRNRHSECLMYWFDGDSGFKYLSPWPERFPPIEKCHARHKIISLDAWHVDINQ 642
Query: 714 NKLRKGLCQDVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKV 769
NK+ K V+ K LY FPTLKH++ ++ + V+VFQQ SR E++ I+V D
Sbjct: 643 NKITK-----VDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDDDS 697
Query: 770 QVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP------------- 816
++ VA +LGK++F+N+PHL E R+ AV+ +++ ++ G
Sbjct: 698 DELQIENVASSVLGKSVFVNWPHLEEARIVAVSDGETKFYLEETQGTQKLYLGKTAPPTK 757
Query: 817 VFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQ 876
V K+ Q + ++I++ Y + G+ I T V+VY Q + KY G+V +
Sbjct: 758 VVHVGDKE-QSNWVKEVQTISEHYQRRKGIIINETSVVVYAQLLTGHKYQLNQNGEVHLE 816
Query: 877 RTFIRSTVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST- 934
+ + + + + YQ+ V ++ KT+D++F P F L P+YG G V +
Sbjct: 817 KQWSKQVLPFVYQTIVKDISAFETHFSNIKTLDDLFPPRSTVFMLGTPYYGCTGEVQDSG 876
Query: 935 -VKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIF 993
V E I++ F + EP L L+ Q Y P Y +AS+L +S L+SRFTGSIF
Sbjct: 877 DVITEGR-IRVVFNIPCEPHLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIF 935
Query: 994 IIDSTE---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQF 1050
I + G + N+GLN+KF++KNEEV G+T++ + +W Y+ V L+ Y+++
Sbjct: 936 IGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VSNEWMYSCAVEQLLAEYLERV 993
Query: 1051 PEVFGFLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDA 1107
PE+F ++ +S +D++ DD++P + G ++V +IV+WLK P + C ++DA
Sbjct: 994 PELFSYVAKNSQEDVFYEDDIWPGENENGAEKVQEIVTWLKAHPVSALSRSSCDLQILDA 1053
Query: 1108 KVVSLIEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRD 1165
+V IE V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+
Sbjct: 1054 AIVEKIEEEVEKCKQRKSNKKVRVTVKPHLLYRPLEQQQGIIPDRDAEFRLFDRVVNVRE 1113
Query: 1166 CYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSY 1225
++VP+G RGTIIGI D +++V+FD+ F G++IRCS +RGYR+P A+INLS+
Sbjct: 1114 NFSVPVGLRGTIIGIKGASREADVLFEVLFDEEFHGGLRIRCSPARGYRLPTSALINLSH 1173
Query: 1226 GER 1228
G R
Sbjct: 1174 GNR 1176
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 101/129 (78%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFR+AKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRAAKEAEDKIKKALEKGE 120
Query: 121 RLPTEKRFD 129
LP+E RFD
Sbjct: 121 ILPSEARFD 129
>gi|334347265|ref|XP_003341907.1| PREDICTED: 5'-3' exoribonuclease 1 [Monodelphis domestica]
Length = 1713
Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/1143 (45%), Positives = 727/1143 (63%), Gaps = 81/1143 (7%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFR+AKEAE +KA EKGE LP+E RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRAAKEAEDKIKKALEKGEILPSEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI++DK W+ V + LSGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISSDK---------SWQGVTIYLSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K KPD++PN+RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKGKPDHDPNIRHCLYGLDADLIMLGLTSHESHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LK+ +SF + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKDK--ISFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY+ Y VLP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYRTYMTVLPELGGYINENGHLNLPRFEKYLIKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF-------------HKEKSKEMDPDLAALIKATDDDYDDGTEE 477
D+++ E K+G K+ + K K +E LAAL D EE
Sbjct: 356 VDLKWFESKVGNKYLNEAAGIAAEEAKNYKQKKLKGQENSMCLAAL--------DKTKEE 407
Query: 478 VLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAI 537
V+ + E D+D F +EF Q+K YY K+ V+++ L DQAECY++AI
Sbjct: 408 VMTSKSVIEDEPEDDDL-----FETEFRQYKRTYYMTKMGVEIVSDDFLADQAECYVQAI 462
Query: 538 QWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASK 597
QW LHYYY+G SWSWYYP+HYAPY+SDI++ S L +++E+G+PF+PF+QLLAVLPAASK
Sbjct: 463 QWILHYYYHGVQSWSWYYPYHYAPYLSDIRNISELKIQFELGKPFMPFEQLLAVLPAASK 522
Query: 598 ELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEH 657
+LLP YQ+LMT E SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM++
Sbjct: 523 DLLPGCYQHLMTSEESPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLQAMESCHK 582
Query: 658 LLTDEERSRNRHGPMLVYTYSNVNLGTALA--PDYFPAINENHAVEKPLYRDDIYV--HP 713
L +EE RNRH L+Y + + L+ P+ FP I + HA K + D +V +
Sbjct: 583 YLREEEEKRNRHSECLMYWFDGDSGFKYLSPWPERFPPIEKCHARHKIISLDAWHVDINQ 642
Query: 714 NKLRKGLCQDVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKV 769
NK+ K V+ K LY FPTLKH++ ++ + V+VFQQ SR E++ I+V D
Sbjct: 643 NKITK-----VDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDDDS 697
Query: 770 QVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP------------- 816
++ VA +LGK++F+N+PHL E R+ AV+ +++ ++ G
Sbjct: 698 DELQIENVASSVLGKSVFVNWPHLEEARIVAVSDGETKFYLEETQGTQKLYLGKTAPPTK 757
Query: 817 VFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQ 876
V K+ Q + ++I++ Y + G+ I T V+VY Q + KY G+V +
Sbjct: 758 VVHVGDKE-QSNWVKEVQTISEHYQRRKGIIINETSVVVYAQLLTGHKYQLNQNGEVHLE 816
Query: 877 RTFIRSTVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST- 934
+ + + + + YQ+ V ++ KT+D++F P F L P+YG G V +
Sbjct: 817 KQWSKQVLPFVYQTIVKDISAFETHFSNIKTLDDLFPPRSTVFMLGTPYYGCTGEVQDSG 876
Query: 935 -VKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIF 993
V E I++ F + EP L L+ Q Y P Y +AS+L +S L+SRFTGSIF
Sbjct: 877 DVITEGR-IRVVFNIPCEPHLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIF 935
Query: 994 IIDSTE---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQF 1050
I + G + N+GLN+KF++KNEEV G+T++ + +W Y+ V L+ Y+++
Sbjct: 936 IGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VSNEWMYSCAVEQLLAEYLERV 993
Query: 1051 PEVFGFLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDA 1107
PE+F ++ +S +D++ DD++P + G ++V +IV+WLK P + C ++DA
Sbjct: 994 PELFSYVAKNSQEDVFYEDDIWPGENENGAEKVQEIVTWLKAHPVSALSRSSCDLQILDA 1053
Query: 1108 KVVSLIEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRD 1165
+V IE V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+
Sbjct: 1054 AIVEKIEEEVEKCKQRKSNKKVRVTVKPHLLYRPLEQQQGIIPDRDAEFRLFDRVVNVRE 1113
Query: 1166 CYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSY 1225
++VP+G RGTIIGI D +++V+FD+ F G++IRCS +RGYR+P A+INLS+
Sbjct: 1114 NFSVPVGLRGTIIGIKGASREADVLFEVLFDEEFHGGLRIRCSPARGYRLPTSALINLSH 1173
Query: 1226 GER 1228
G R
Sbjct: 1174 GNR 1176
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 101/129 (78%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFR+AKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRAAKEAEDKIKKALEKGE 120
Query: 121 RLPTEKRFD 129
LP+E RFD
Sbjct: 121 ILPSEARFD 129
>gi|363737031|ref|XP_422596.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Gallus gallus]
Length = 1736
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/1142 (44%), Positives = 730/1142 (63%), Gaps = 79/1142 (6%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKALEKGEILPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ + V LSGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGITVYLSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KP ++PN RHCLYGLDADLIMLGL THE +F+LLREEV+F K ++ +
Sbjct: 181 IMEFIRSEKAKPHHDPNTRHCLYGLDADLIMLGLTTHEAHFALLREEVRFGGKKSQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
PEET F LLHLSLMR+Y++ EF +K+ +SF + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 ACAPEETTFHLLHLSLMREYIDYEFSPVKDK--ISFDYDIEKIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY+ Y +LP L GYINE G+LNLKRFEK+LT+L+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYRTYMAILPELGGYINENGHLNLKRFEKYLTRLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF-------------HKEKSKEMDPDLAALIKATDDDYDDGTEE 477
D+++ E K+G K+ + K K++E LAAL K D E
Sbjct: 356 VDLKWFESKVGNKYLNEAAGIAAEEARNNKQKKRKAQENSLCLAALEKNED--------E 407
Query: 478 VLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAI 537
V+ E D+D F +EF Q+K YY K+ V+++ L DQAECY++AI
Sbjct: 408 VVTSKTVLEDEPEDDDL-----FETEFRQYKRTYYMTKMGIEVVSDDFLADQAECYVQAI 462
Query: 538 QWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASK 597
QW LHYYY+G SWSWYYP+HYAPY+SDI++ S L +++E+G+PF+PF+QLLAVLPAASK
Sbjct: 463 QWILHYYYHGVQSWSWYYPYHYAPYLSDIRNISELKIQFELGKPFMPFEQLLAVLPAASK 522
Query: 598 ELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEH 657
+LLP YQ+LM ++SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM++
Sbjct: 523 DLLPRCYQHLMVSQDSPIIEYYPLDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMESCNK 582
Query: 658 LLTDEERSRNRHGPMLVYTYSNVNLG--TALAPDYFPAINENHAVEK--PLYRDDIYVHP 713
L +EE+ RN H L+Y Y T+ P+ FPAI H K PL + +
Sbjct: 583 CLKEEEKRRNVHSACLMYWYDKDAEFPYTSPWPEKFPAIERCHTRYKTIPLDAWHVEITH 642
Query: 714 NKLRKGLCQDVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKV 769
NK+ K +N LY FPTLKH++ ++ + V+VFQQ S E++ I+ +K
Sbjct: 643 NKITK-----INKSALYFCGFPTLKHIKHKFYLKKSGVQVFQQSSHGENMMLEILTDEKS 697
Query: 770 QVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSG-----------PVF 818
+ +++ VA +LGK +F+N+PHL E RV AV+ +++ ++ G P
Sbjct: 698 KEQTVENVASSVLGKVVFVNWPHLEEARVVAVSDGETKFYLEEPHGTQKLYMGNAVPPTK 757
Query: 819 ERAAKDMQDAFQLSK-KSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQR 877
D + + L + + +++ Y + G+ I T V+VY Q + +Y G+V ++
Sbjct: 758 VTFVGDKEQSMWLKEVQGVSEHYQRRKGIIIHETSVVVYAQLLTGNRYQLNQNGQVYLEK 817
Query: 878 TFIRSTVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST-- 934
+ + + + YQ+ V +++ +T+D++F PG F L +P+YG G V +
Sbjct: 818 QWSKQALPFVYQTVVKDIKAFDSRFSNIRTLDDLFPPGSTAFMLGSPYYGCMGEVQDSRD 877
Query: 935 VKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFI 994
V E I++ F + EP L L+ Q Y P+Y +AS+L +S L+SRFTGSIFI
Sbjct: 878 VIPEGR-IRVVFSIPCEPQLDRLIQNQHKYSVKYNPAYILASRLGVSGYLVSRFTGSIFI 936
Query: 995 IDSTEE---GAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFP 1051
+++ G + N+GLN+KF++KNEEV G+T++ +W Y+ V L+ Y+++ P
Sbjct: 937 GRGSKKNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGNEWMYSSAVEQLLAEYLERVP 994
Query: 1052 EVFGFLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAK 1108
E+F ++ +S +DI+ DD++P + G ++V +IV+WLK P + C ++DA
Sbjct: 995 ELFSYIAKNSQEDIFYEDDIWPGEDENGAEKVQEIVAWLKAHPVSALSRSSCDLQILDAA 1054
Query: 1109 VVSLIEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDC 1166
+V IE ++ C+ K K++ + VKP+ LY P + + PD D +++LFDRVVN+R+
Sbjct: 1055 IVEKIEEEIEKCKQRKSNKKVRVTVKPHLLYRPLEQQNGVVPDRDAEYRLFDRVVNVREN 1114
Query: 1167 YTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYG 1226
++VP+G RGTIIGI D +++V+FD+ F G+ IRCS +RGYR+P+ A+INLS+G
Sbjct: 1115 FSVPVGLRGTIIGIKGASRETDVLFEVLFDEEFLGGLTIRCSPARGYRLPSSALINLSHG 1174
Query: 1227 ER 1228
R
Sbjct: 1175 VR 1176
Score = 230 bits (586), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 102/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLS+V++E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI+E +I
Sbjct: 1 MGVPKFYRWISERYPCLSQVLKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISEDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKALEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 ILPTEARFD 129
>gi|351699398|gb|EHB02317.1| 5'-3' exoribonuclease 1 [Heterocephalus glaber]
Length = 1707
Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/1141 (44%), Positives = 717/1141 (62%), Gaps = 76/1141 (6%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNVKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEN--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFHKEK--------------SKEMDPDLAALIKATDDDYDDGTE 476
D+++ E K+G K+ + +E AAL K+ E
Sbjct: 356 VDLKWFESKVGNKYLNEAAGIAAEEAKNYKEKKKSKGQENSVCWAALDKSEG-------E 408
Query: 477 EVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRA 536
V++ N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++A
Sbjct: 409 MVVSKDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAVCYVQA 462
Query: 537 IQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAAS 596
IQW LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAAS
Sbjct: 463 IQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAAS 522
Query: 597 KELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVE 656
K LLP YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+
Sbjct: 523 KNLLPVCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCN 582
Query: 657 HLLTDEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPN 714
H L +EER RNRH L+ Y + + P+ FPAI + K + D +V
Sbjct: 583 HSLKEEERKRNRHSECLMCWYDKDTEFIYPSPWPEKFPAIERCYTRYKIISLDAWHV--- 639
Query: 715 KLRKGLCQDVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQ 770
+ K V+ K LY FPTLKH++ ++ + V+VFQQ SR E++ I+V +
Sbjct: 640 DISKNKITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVNAESD 699
Query: 771 VPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------V 817
S++ VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 700 ELSIENVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYLGRTAPPSKV 759
Query: 818 FERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQR 877
K+ Q + + I++ Y + G+ I T ++VY Q + RKY G+V ++
Sbjct: 760 IHLGDKE-QSNWTKEVQGISEHYLRRKGIIINETSMVVYAQLLTGRKYQINHNGEVRLEK 818
Query: 878 TFIRSTVTYAYQSAVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCV-ISTV 935
+ + + + YQ+ V ++Q KT+D++F PG F L P+YG G V +S
Sbjct: 819 QWSKQILPFVYQTIVKDIQAFDSRFSSIKTLDDLFPPGSVVFMLGTPYYGCTGEVQVSGD 878
Query: 936 KEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFII 995
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI
Sbjct: 879 VITEGRIRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIG 938
Query: 996 DSTE---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPE 1052
+ G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE
Sbjct: 939 RGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPE 996
Query: 1053 VFGFLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKV 1109
+F ++ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +
Sbjct: 997 LFSYIAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAI 1056
Query: 1110 VSLIEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCY 1167
V IE VD C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ +
Sbjct: 1057 VEKIEEEVDKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENF 1116
Query: 1168 TVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGE 1227
+VP+G RGTIIGI D +++V+FD+ FP G+ IRCS +GYR+P A++NLS+G
Sbjct: 1117 SVPVGLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGKGYRLPTSALVNLSHGS 1176
Query: 1228 R 1228
R
Sbjct: 1177 R 1177
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|432915339|ref|XP_004079186.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like [Oryzias
latipes]
Length = 1689
Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/1136 (46%), Positives = 720/1136 (63%), Gaps = 67/1136 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA +KGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKALDKGEVLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RL +QL+YFV K++TDKLW + V V LSGHETPGEGEHK
Sbjct: 130 SNCITPGTDFMARLQEQLKYFVHNKLSTDKLWHN---------VKVYLSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR SKP ++PN RHCLYGLDADLIMLGL +HEP+FSLLREEV+ K K +
Sbjct: 181 IMEFIRSENSKPSHDPNTRHCLYGLDADLIMLGLTSHEPHFSLLREEVRXGGK--KSQKR 238
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
I PEET F LLHLSLMR+Y++ EF LK L + +E IIDDW+LMGFL+GNDFIP
Sbjct: 239 ITAPEETTFHLLHLSLMREYIDYEFSWLKNH--LGSAYDLERIIDDWILMGFLVGNDFIP 296
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP+LHI + ALP+LYK Y VLP+L GY+NE G+LNLK FEK++ KL+ FD E F E +
Sbjct: 297 HLPNLHINHDALPMLYKTYISVLPSLGGYLNENGHLNLKNFEKYMEKLSEFDREHFNEVF 356
Query: 431 ADIQYLEGKMGKKF----------SDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + K+ +K+ D L L T D D +EV
Sbjct: 357 VDLKWFESKVGNKYLNESAGLAAEKESAGKKFNKKKDASLG-LSALTSPDKDTEHKEVAE 415
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
+ EE F +EF Q+K YY K+ V++E L QA+CY+ IQW
Sbjct: 416 DDDEEEE---------DDLFETEFRQYKRTYYMTKMAVDVVSDEFLAQQAKCYVEGIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L L +E+GEPF+PFQQLLAVLPAAS LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISDLKLTFELGEPFMPFQQLLAVLPAASMGLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
PE Y++LMT ENSPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L+ AM+ H LT
Sbjct: 527 PECYRHLMTSENSPIIEYYPVDFKTDLNGKQQEWEAVVLIPFIDEKRLLAAMEPYNHKLT 586
Query: 661 DEERSRNRHGPMLVYTYS-NVNLG-TALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EE+ RN H VY+Y ++ T+ P FP I + + D +V + + K
Sbjct: 587 KEEKDRNGHKECAVYSYDPEIDFTYTSTLPQLFPNIVHCRVRKANIPVDAWHVSSDHVVK 646
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSL--KQ 776
+ LY FPTL+H++ + + V VFQQ SR E++++ Q +
Sbjct: 647 HADRS---SLYFCGFPTLQHIKHKFYKKKSGVVVFQQSSRGENMMLEILPTQEGEMICDN 703
Query: 777 VADQILGKTIFINYPHLIEIRVQAVATKDSRI----------SFDKNSGP----VFERAA 822
VA Q+LGK +F+N+PHL E R+ AV+ +++ +DK S P V +
Sbjct: 704 VAAQVLGKPVFVNWPHLEEARIVAVSDGETKFILEEPPGVQKVYDKPSSPPPTKVTYLSD 763
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ +D + + IT+ Y + G+ I +T+V++YGQ + RKY +G V ++ + +
Sbjct: 764 KEQKDWVK-DVQGITEFYLKRKGIVINDTDVVLYGQLLTGRKYVPQDKGAVELEKQWAKQ 822
Query: 883 TVTYAYQSAVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKE-ENS 940
+ +AYQ+ V +++ SL +K++DE+F P F + P+YG+ G V + ++
Sbjct: 823 VLPFAYQAVVKDIEAFYSSLTSFKSLDELFPPATTVFMVGAPYYGAMGEVQDSQDVLKDG 882
Query: 941 FIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEE 1000
I++ F V EP + L+ Q Y P Y +AS+L IS L+SRF+GSIFI ++
Sbjct: 883 RIRVVFSVPHEPQMDHLIQNQHKYSVRYSPGYVLASRLGISGYLVSRFSGSIFIGRGSKR 942
Query: 1001 ---GAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFL 1057
G ++ N+GLN+KF++KNEEV G+T+R E K+W Y+ V L+ Y+ +F EVF +
Sbjct: 943 NPCGEQKSNVGLNLKFNKKNEEVPGYTKRSE--KEWLYSAAVEELLAEYLDRFSEVFDAV 1000
Query: 1058 KDHSSDDIYLRDDVFP---HQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIE 1114
+S DDI+ DD++P G +RVA+I SWL+ P + C V+DA +V IE
Sbjct: 1001 SRNSHDDIFYEDDIWPGVDQNGAERVAEITSWLRSHPVSSISRASCDLQVLDAAIVEKIE 1060
Query: 1115 HAVD--TCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLG 1172
AV+ +K K++ + VKP+ L+ P L + PDPD +++LFDRVVNIR+ +TVPLG
Sbjct: 1061 EAVEKTKIKKSTKKVRVTVKPHLLFRPLEQLQGVVPDPDAEYRLFDRVVNIREGFTVPLG 1120
Query: 1173 YRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
RGT+IGI E + +Y+V+FD+ F G+ IRC+ R YR+P A+INLS+G R
Sbjct: 1121 LRGTVIGIKGAEREAEVLYEVLFDEEFAGGLIIRCASPRAYRLPPFALINLSHGVR 1176
Score = 231 bits (590), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND D HFRI+E++I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDEDVHFRISEEKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA +KGE
Sbjct: 61 FADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKALDKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 VLPTEARFD 129
>gi|348531416|ref|XP_003453205.1| PREDICTED: 5'-3' exoribonuclease 1 [Oreochromis niloticus]
Length = 1692
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/1140 (45%), Positives = 722/1140 (63%), Gaps = 73/1140 (6%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA +KGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEEKIKKALDKGEVLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RL +QL+YFV K++ DKLW++ V V LSGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLQEQLKYFVHNKLSNDKLWQN---------VKVYLSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR +KP+++PN RHCLYGLDADLIMLGL +HEP FSLLREEV+F K K +
Sbjct: 181 IMEFIRSENTKPNHDPNTRHCLYGLDADLIMLGLTSHEPNFSLLREEVRFGGK--KSQKR 238
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
I PEET F LLHLSLMR+Y++ EF +LK + + +E +IDDW+LMGFL+GNDFIP
Sbjct: 239 ITAPEETTFHLLHLSLMREYIDYEFSELKNK--MGSDYDLERVIDDWILMGFLVGNDFIP 296
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP+LHI + ALPLLYK Y VLP+L GY+NE G+LNL+ FEK+L KLA FD E F E +
Sbjct: 297 HLPNLHINHDALPLLYKTYISVLPSLGGYLNENGHLNLRNFEKYLEKLAEFDREHFNEVF 356
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYAN------- 483
D+++ E K+G K+ + LAA +A D + L A+
Sbjct: 357 VDLKWFESKVGNKYLN---------EAAGLAAEKEAASKDARKNEDSALCLASQTTSEKI 407
Query: 484 --YEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNL 541
E+ + ++EE F +EF Q+K YY K+ V++E L +QA+CY+ IQW L
Sbjct: 408 TGEEKAAAAVDEEEEDDIFETEFRQYKRTYYMNKIGVDVVSDEFLANQAKCYVEGIQWIL 467
Query: 542 HYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLP 601
HYYY+G SWSWYYP+HYAPY+SDI++ S L L +E+G+PF+PFQQLLAVLPAAS ELLP
Sbjct: 468 HYYYHGVQSWSWYYPYHYAPYLSDIRNVSGLKLTFELGQPFMPFQQLLAVLPAASMELLP 527
Query: 602 EPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTD 661
E Y++LMT E+SPI+ YYP +F TDLNGK+Q+WEAVVLIPFIDE L+ AM+ LT
Sbjct: 528 ECYRHLMTSESSPIIGYYPLDFKTDLNGKQQEWEAVVLIPFIDERCLLAAMEPCNSKLTK 587
Query: 662 EERSRNRHGPMLVYTYSNVNLGTALA---PDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EE++RN H VY+Y + A A P FP I H + D V + + K
Sbjct: 588 EEKARNCHTECAVYSYDR-EMDFAYASPLPQLFPDIVHCHVRTAHIPMDAWQVSLDHISK 646
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESII--IVQDKVQVPSLKQ 776
+ + LY FPTL+H++ + V VFQQ SR E+++ I+ ++ +
Sbjct: 647 PVDRSA---LYFCGFPTLQHIKHKFYKKKGGVVVFQQSSRGENMLLDILPNQEGETTCDD 703
Query: 777 VADQILGKTIFINYPHLIEIRVQAVATKDSRI----------SFDKNSGP-------VFE 819
VA Q+LGK++F+N+PHL E R+ AV+ +++ +D+ S P +F+
Sbjct: 704 VAAQVLGKSVFVNWPHLEEARIIAVSDGETKFYLEEPPGVQRVYDRPSTPPPAKVTCLFD 763
Query: 820 RAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTF 879
+ K+ Q IT+ Y + G+ I TEV++YGQ + RKY G V ++ +
Sbjct: 764 KEQKEWIKDVQ----GITEYYLKRKGIVINETEVVLYGQLLTGRKYVPKANGVVELEKQW 819
Query: 880 IRSTVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKE- 937
+ + +AYQ+ V +++ SL +K++DE+F P F + NP+YG+ G V +
Sbjct: 820 AKQVLPFAYQAVVKDIKAFYSSLACFKSLDELFPPTTTVFMVGNPYYGAMGEVQDSQDVI 879
Query: 938 ENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDS 997
++ I++ F V EP L L+ Q Y P Y +AS+L I+ L+SRF+GSIFI
Sbjct: 880 KDGRIRVVFSVPHEPQLEPLIQNQHKYSVKYSPGYVLASRLGITGYLVSRFSGSIFIGRG 939
Query: 998 TEE---GAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVF 1054
+++ G +R N+GLN+KF++KNEEV G+T+R E K+W Y+ V L+ Y+ +F EVF
Sbjct: 940 SKKNPCGEQRANVGLNLKFNKKNEEVPGYTKRTE--KEWLYSAAVEELLAEYLDRFSEVF 997
Query: 1055 GFLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVS 1111
+ +S DD++ DD++P + G +RVA+I SWLK P + C V+DA +V
Sbjct: 998 NTVSRNSHDDVFYEDDIWPGEDQNGAERVAEITSWLKSHPVSSISRASCDLQVLDAAIVE 1057
Query: 1112 LIEHAVDTCEKVEKQIT--LFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTV 1169
+IE AV+ + + + VKP+ L+ P + PDPD +++LFDRV+NIR+ +TV
Sbjct: 1058 MIEEAVEKTKVKKSTKKVRVTVKPHLLFRPLEQQQGVVPDPDAEYRLFDRVINIRESFTV 1117
Query: 1170 PLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGERL 1229
PLG RGTIIGI E + +Y+V+FD+ F G+ IRC+ SR YR+P A+INLS+G R+
Sbjct: 1118 PLGLRGTIIGIKGAEREAEVLYEVLFDEEFAGGLNIRCTSSRCYRLPPCALINLSHGARV 1177
Score = 230 bits (587), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 102/129 (79%), Positives = 118/129 (91%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDN YLDMNGIIH CSHPND D HFRI+E++I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNFYLDMNGIIHQCSHPNDEDVHFRISEEKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA +KGE
Sbjct: 61 FADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEEKIKKALDKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 VLPTEARFD 129
>gi|327267071|ref|XP_003218326.1| PREDICTED: 5'-3' exoribonuclease 1-like [Anolis carolinensis]
Length = 1744
Score = 957 bits (2475), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 718/1137 (63%), Gaps = 66/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKALEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V V LSGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTVYLSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLI+LGL +HEP+FSLLREEV+F K ++ +
Sbjct: 181 IMEFIRSEKTKPDHDPNTRHCLYGLDADLIILGLTSHEPHFSLLREEVRFGGKKSQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF +K + FP+ IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSPVKTK--IKFPYEIEKIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALP+LY+ Y VLP L+GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPMLYRTYMAVLPELEGYINEKGHLNLPRFEKYLAKLSDFDREHFSEIF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + HK+ +L A + D G +L
Sbjct: 356 VDLKWFESKVGNKYLNEAAGKAAEESKQHKKHKVSSSVQENSLYLAALEKPDGGNGVILK 415
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
DE EE F +EF Q+K YY K+ V+++ L DQA+CY++AIQW
Sbjct: 416 TT------LEDEPEE-DDLFETEFRQYKRAYYMTKMGVEVVSDDFLADQAKCYVQAIQWI 468
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAPY+SDI+ L + ++ +PF+PF+QLLAVLPAASK+LL
Sbjct: 469 LHYYYHGVQSWSWYYPYHYAPYLSDIRKIGDLKIYLDLEKPFMPFEQLLAVLPAASKDLL 528
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P+ YQ+LMT E+SPI++YYP EF TDLNGK+Q+WEAVVLIPFIDE +L++AM+ LLT
Sbjct: 529 PKCYQHLMTSEDSPIIDYYPTEFKTDLNGKQQEWEAVVLIPFIDEKQLLEAMEPCNKLLT 588
Query: 661 DEERSRNRHGPMLVYTYSNVNLGTALA--PDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RNRH ++Y + L+ P+ FP+I H K L D V +
Sbjct: 589 TEERQRNRHSECIMYLHDKDIDFQYLSPWPEKFPSIEHCHTRYKILSLDAWLV---DIAH 645
Query: 719 GLCQDVNL-KLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSL 774
++L K+Y FPTLKH+ ++ V+VFQQ S E++ I+V++ + ++
Sbjct: 646 NEITKLDLEKVYFCGFPTLKHIPHKFYLKKYGVQVFQQSSHGENMLLEIMVREDSEELNI 705
Query: 775 KQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSG------------PVFERAA 822
+ +A +LGK++F+N+PHL E RV V+ +++ S ++ G A
Sbjct: 706 ENIASSVLGKSVFVNWPHLEEARVVVVSDGETKFSLEEPPGTQKLYMGNAVPPTKITYAG 765
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
Q+ ++ + I++ Y + G+ I T +VY Q + R+Y G+V ++ + +
Sbjct: 766 DKEQNLWKKDIQGISEHYQKRKGIIINETSAIVYAQLLTGRRYQLNQSGEVYLEKQWSKQ 825
Query: 883 TVTYAYQSAVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCV--ISTVKEEN 939
+ +AYQ+ V +++ + KT+D++F GC F L P+YG G V S V E
Sbjct: 826 VLPFAYQTVVKDIKAFDSRFSKLKTLDDLFPLGCTVFMLGVPYYGCTGEVQDSSDVISEG 885
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP L L+ Q Y P Y +AS+L IS L+SRFTGSIFI ++
Sbjct: 886 R-IRVLFNIPCEPQLEILIQNQHKYSVKYNPGYVLASRLGISGYLVSRFTGSIFIGRGSK 944
Query: 1000 E---GAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
+ G + N+GLN+KF++KNEEV G+T++ +W Y+ V L+ Y+++ PE+F +
Sbjct: 945 KNSHGDHKANVGLNLKFNKKNEEVPGYTKK--VGNEWMYSSAVEQLLAEYLERVPELFSY 1002
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ + +DI+ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1003 VAKNGQEDIFYEDDIWPGEEENGAEKVQEIIAWLKAHPVSTLSRSSCDLHILDAAIVEKI 1062
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E ++ C+ K K++ + VKP+ LY + PD D ++LFDRVVN+R+ ++VPL
Sbjct: 1063 EEEIEKCKQRKSNKKVRVTVKPHLLYRSLEQQHGIIPDRDADYRLFDRVVNVRENFSVPL 1122
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +Y+V+FD+ F G+ IR S +RGYRMP+ A+INLSYG R
Sbjct: 1123 GLRGTIIGIKGASRESDVLYEVLFDEEFHGGLTIRSSPARGYRMPSSALINLSYGNR 1179
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLS+VV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI+E +I
Sbjct: 1 MGVPKFYRWISERYPCLSQVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISEDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKALEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|395528095|ref|XP_003766167.1| PREDICTED: 5'-3' exoribonuclease 1 [Sarcophilus harrisii]
Length = 1695
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/1143 (44%), Positives = 726/1143 (63%), Gaps = 81/1143 (7%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFR+AKEAE +KA EKGE LPTE RFD
Sbjct: 55 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRAAKEAEDKIKKALEKGEILPTEARFD 114
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI++DK W+ V + LSGHETPGEGEHK
Sbjct: 115 SNCITPGTEFMARLHEHLKYFVNMKISSDK---------SWQGVTIYLSGHETPGEGEHK 165
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K KPD++PN+RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 166 IMEFIRSEKGKPDHDPNIRHCLYGLDADLIMLGLTSHESHFSLLREEVRFGGKKTQ---R 222
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LK+ +SF + IE IIDDW+LMGFL+GNDFIP
Sbjct: 223 VCAPEETTFHLLHLSLMREYIDYEFSALKDK--ISFKYDIERIIDDWILMGFLVGNDFIP 280
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY+ Y VLP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 281 HLPHLHINHDALPLLYRTYMTVLPELGGYINENGHLNLPRFEKYLIKLSDFDREHFSEVF 340
Query: 431 ADIQYLEGKMGKKFSDVF-------------HKEKSKEMDPDLAALIKATDDDYDDGTEE 477
D+++ E K+G K+ + K K +E LAAL D EE
Sbjct: 341 VDLKWFESKVGNKYLNEAAGIAAEEAKNYKQKKLKGQENSMCLAAL--------DKTEEE 392
Query: 478 VLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAI 537
V+ + E D+D F +EF Q+K YY K+ V+++ L DQAECY++AI
Sbjct: 393 VMTSKSVVEDEPEDDDL-----FETEFRQYKRTYYMTKMGVEIVSDDFLADQAECYVQAI 447
Query: 538 QWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASK 597
QW LHYYY+G SWSWYYP+HYAPY+SDI++ S L +++E+G+PF+PF+QLLAVLPAASK
Sbjct: 448 QWILHYYYHGVQSWSWYYPYHYAPYLSDIRNISELKIQFELGKPFMPFEQLLAVLPAASK 507
Query: 598 ELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEH 657
+LLP YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM++
Sbjct: 508 DLLPGCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLQAMESCNK 567
Query: 658 LLTDEERSRNRHGPMLVYTYSNVNLG---TALAPDYFPAINENHAVEKPLYRDDIYV--H 712
L +EE+ RNRH L+Y + + G + P+ F I + A K + D +V +
Sbjct: 568 YLKEEEKKRNRHSECLMYWFDQ-DAGFKYPSPWPEKFLTIEKCRARYKIISLDAWHVDIN 626
Query: 713 PNKLRKGLCQDVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDK 768
NK+ K V+ K LY FPTLKH++ ++ + V+VFQQ SR E++ I+V +
Sbjct: 627 HNKITK-----VDEKTLYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDND 681
Query: 769 VQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSG-----------PV 817
++ +A +LGK++F+N+PHL E RV AV+ +++ ++ G P
Sbjct: 682 SDELQIENIASLVLGKSVFVNWPHLEEARVVAVSDGETKFYLEETQGTQKLYLGKSAPPT 741
Query: 818 FERAAKDMQDAFQLSK-KSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQ 876
D + + + + ++I++ Y + G+ I T V+VY Q + KY G+V +
Sbjct: 742 KVAHVGDKEQSNWMKEVQAISELYQRRKGIIINETSVVVYAQLLTGHKYQLNQNGEVHLE 801
Query: 877 RTFIRSTVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST- 934
+ + + + + YQ+ V ++ KT+ ++F P F L P+YG G V +
Sbjct: 802 KQWSKQVLPFVYQTIVKDISAFETHFSNIKTLGDLFPPRSTVFMLGTPYYGCTGEVQDSG 861
Query: 935 -VKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIF 993
V E I++ F + EP L L+ Q Y P Y +AS+L +S L+SRFTGSIF
Sbjct: 862 DVITEGR-IRVVFNIPCEPHLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIF 920
Query: 994 IIDSTE---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQF 1050
I + G + N+GLN+KF++KNEEV G+T++ +W Y+ V L+ Y+++
Sbjct: 921 IGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGNEWMYSCAVEQLLAEYLERV 978
Query: 1051 PEVFGFLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDA 1107
PE+F ++ +S +D++ DD++P + G ++V +IV+WLK P + C ++DA
Sbjct: 979 PELFSYVAKNSQEDVFYEDDIWPGENENGAEKVQEIVTWLKAHPVSALSRSSCDLQILDA 1038
Query: 1108 KVVSLIEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRD 1165
+V IE V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+
Sbjct: 1039 AIVEKIEEEVEKCKQRKSNKKVRVTVKPHLLYRPLEQQQGIIPDRDAEFRLFDRVVNVRE 1098
Query: 1166 CYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSY 1225
++VP+G RGTIIGI D +++V+FD+ F G++IRCS +RGYR+P A+INLS+
Sbjct: 1099 NFSVPVGLRGTIIGIKGASREADVLFEVLFDEEFHGGLRIRCSPARGYRLPTSALINLSH 1158
Query: 1226 GER 1228
G R
Sbjct: 1159 GNR 1161
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/104 (77%), Positives = 94/104 (90%)
Query: 26 IPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAI 85
IPEFDNLYLDMNGIIH CSHPND+D HFRI++ +IF DIFHY+E+LFR+I+P+K+FFMA+
Sbjct: 11 IPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFADIFHYLEVLFRIIKPRKVFFMAV 70
Query: 86 DGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
DGVAPRAKMNQQRGRRFR+AKEAE +KA EKGE LPTE RFD
Sbjct: 71 DGVAPRAKMNQQRGRRFRAAKEAEDKIKKALEKGEILPTEARFD 114
>gi|427788379|gb|JAA59641.1| Putative 5'-3' exonuclease hke1/rat1 [Rhipicephalus pulchellus]
Length = 1628
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/1123 (44%), Positives = 724/1123 (64%), Gaps = 70/1123 (6%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKK FFMA+DGVAPRAKMNQQRGRRF+SAKEA+ E++A+++GE LPTE+RFDSNCI+PG
Sbjct: 4 PKKTFFMAVDGVAPRAKMNQQRGRRFKSAKEAQAQEKEARDRGEVLPTEERFDSNCISPG 63
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL QL+ FV K++TD LW+ V V LSGH+TPGEGEHK+MD+IR
Sbjct: 64 TEFMARLQDQLQQFVATKVSTDPLWRG---------VKVYLSGHQTPGEGEHKVMDFIRT 114
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
+S+P Y+PN RHCLYGLDADLIMLG+C+HEP+F+LLREE+ + + N+ ++ PEE
Sbjct: 115 ERSQPGYDPNTRHCLYGLDADLIMLGMCSHEPHFALLREEIVYGKRQNQ--KRLNVPEEI 172
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F LLHLSL+R+YLELEF +LK+ + F F ++NIIDDWVLM FL+GNDF+P+LP+LHI
Sbjct: 173 TFHLLHLSLLREYLELEFQELKK--TIPFEFKMDNIIDDWVLMCFLVGNDFLPHLPNLHI 230
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
+ ALP+LY+ Y +V+P+L GYINE G LNL+RFEKFLT+L+ FD+E+F + AD ++L
Sbjct: 231 AHNALPVLYQAYIDVMPSLGGYINEYGKLNLERFEKFLTRLSQFDYEKFTDVQADQKFLA 290
Query: 438 GKMG----------KKFSDVFHKEKSKEMDPDLAALI-KATDDDYDDGTEEVLNYANYEE 486
K + S KEK+K DPD L+ K + D D
Sbjct: 291 SKRAYAEAPNGIVQQNGSPPSGKEKTK--DPDEKRLLEKFSHLDIPD------------- 335
Query: 487 YYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYN 546
+ SDED+E EF QHK DYY KL+YA V EV+++QA Y+RAIQWNLHYYYN
Sbjct: 336 -FDSDEDQEGLLEM--EFRQHKRDYYVNKLEYADVNKEVMQEQAHGYVRAIQWNLHYYYN 392
Query: 547 GCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQN 606
G SW+WYYPHHY+PYISDIKDF +L++ +E+G+PFLPFQQL+A+LP+ASK+L+P YQ+
Sbjct: 393 GVQSWNWYYPHHYSPYISDIKDFQNLDMTFELGKPFLPFQQLMAILPSASKKLVPSAYQD 452
Query: 607 LMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSR 666
LM E SPIL+YYP++F TDLNGK+ DWEAVVLIPFI+E +L+ AM+ LT+EE+SR
Sbjct: 453 LMENEESPILDYYPKDFNTDLNGKQHDWEAVVLIPFIEEGRLLPAMEERFEKLTEEEKSR 512
Query: 667 NRHGPMLVYTYS------NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGL 720
N H L++ YS G L P++ NHA L D + +K++KGL
Sbjct: 513 NGHSGHLLFVYSEEPQPPRPCKGERLV----PSLEVNHAKVTELDMDAFRLPVSKIKKGL 568
Query: 721 CQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQ 780
+ + L +Y FPTLKH+++T ++ +KVFQ +RNES++I +LK+++ +
Sbjct: 569 MEGIKLDVYFPGFPTLKHLEYTGCLKKESIKVFQALTRNESMVITISNNDERTLKEISTE 628
Query: 781 ILGKTIFINYPHLIEIRVQAVATKDSRISFDKN-------SGPVFERAAKDMQDAFQLSK 833
+LGK +++ +PHL+E V AV+++D R S + + S +F+ A+ D Q+ F +
Sbjct: 629 LLGKPVYVYWPHLLEALVVAVSSRDERHSLETHKHAKNYESVSIFKLASTD-QEVFDMQV 687
Query: 834 KSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVL 893
I + Y + GV++G ++LV+ + + RKY +G++T + + +V +A QS V
Sbjct: 688 SGIKERYLGRYGVNVGEVDILVFCKTLTGRKYTCTSKGRITLDKQWAELSVPFALQSIVK 747
Query: 894 NLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSF-IKLSFKVQQE 951
++ + E+KT++E+F G CF + +PHYG G V+ E + I + F V E
Sbjct: 748 DITEKSPDFEEFKTVEELFPVGKTCFMIGSPHYGCSGTVVDAKPENKAGRIMVKFTVPSE 807
Query: 952 PDLSDLVHLQDDTV-YNYLPSYTVASKLSISPLLLSRFTGSIFI-IDSTE-EGAKRHNIG 1008
P L ++ + + +Y+ ++ ++ +L ++ +SR TG+++I ++S E E A N+G
Sbjct: 808 PSLDGIIRNERNLCQVHYMNAHQLSQQLGVNAQFVSRITGTVYIQMNSKEAESASLVNVG 867
Query: 1009 LNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLR 1068
L++KF++ +EE+ G+++R T W Y+ + + ++K Y+ ++ + + D
Sbjct: 868 LHLKFNKTSEEIPGYSKR--TNDTWLYSTKCLQVLKEYLAKYLDFVQRMLPFLGQDKIAV 925
Query: 1069 DDVFPHQ-GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE--K 1125
+D++P G++ V ++ W+KEQ K GA ++D V+ IE V+ + E +
Sbjct: 926 EDLYPKGVGKEEVKEVAKWIKEQECTKVPRVKSGAQLLDEGVIQAIEETVNRAKSTEPPQ 985
Query: 1126 QITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGET 1185
++ L V P LY P + PD + LFDRVVN+R+ VPLGYRGTIIG++ E
Sbjct: 986 EVLLDVHPKHLYRPGLQYGWVPPDAKATYNLFDRVVNVRENIAVPLGYRGTIIGLLPLED 1045
Query: 1186 SYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
+ M +VVFD+PF G+ +RCSE GYR+ ++NL+YG R
Sbjct: 1046 NEPQMCEVVFDEPFAGGLPLRCSEHHGYRISILFLVNLTYGSR 1088
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 52/56 (92%)
Query: 74 MIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
MI+PKK FFMA+DGVAPRAKMNQQRGRRF+SAKEA+ E++A+++GE LPTE+RFD
Sbjct: 1 MIKPKKTFFMAVDGVAPRAKMNQQRGRRFKSAKEAQAQEKEARDRGEVLPTEERFD 56
>gi|449278569|gb|EMC86380.1| 5'-3' exoribonuclease 1, partial [Columba livia]
Length = 1710
Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/1129 (44%), Positives = 725/1129 (64%), Gaps = 54/1129 (4%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 45 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKALEKGETLPTEARFD 104
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V V LSGHETPGEGEHK
Sbjct: 105 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTVYLSGHETPGEGEHK 155
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KP ++PN RHCLYGLDADLIMLGL +HE +F+LLREEV+F K ++ +
Sbjct: 156 IMEFIRSEKAKPHHDPNTRHCLYGLDADLIMLGLTSHEAHFALLREEVRFGGKKSQ---R 212
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
PEET F LLHLSLMR+Y++ EF +K+ +SF + IE IIDDW+LMGFL+GNDFIP
Sbjct: 213 ACAPEETTFHLLHLSLMREYIDYEFSPVKDK--ISFEYDIERIIDDWILMGFLVGNDFIP 270
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY+ Y +LP L GYINE G+LNLKRFEK+LTKL+ FD E F E +
Sbjct: 271 HLPHLHINHDALPLLYRTYMAILPELGGYINENGHLNLKRFEKYLTKLSDFDREHFSEVF 330
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYS 490
D+++ E K+G K+ + ++E + KA ++ E +
Sbjct: 331 VDLKWFESKVGNKYLNEAAGIAAEEARKNKQKKQKAQENSICLAALEKKEGEVTPKTVLE 390
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
DE E+ F +EF Q+K YY K+ V+++ L DQAECY++AIQW LHYYY+G S
Sbjct: 391 DEPED-DDLFETEFRQYKRTYYMTKMGVEVVSDDFLADQAECYVQAIQWILHYYYHGVQS 449
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
WSWYYP+HYAPY+SDI++ L +K+E+G+PF+PF+QLLAVLPAASK+LLP+ YQ+LM
Sbjct: 450 WSWYYPYHYAPYLSDIRNIGELKIKFELGKPFMPFEQLLAVLPAASKDLLPKCYQHLMIS 509
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
++SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM++ L +EE+ RN H
Sbjct: 510 QDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLQAMESCNKCLKEEEKRRNTHS 569
Query: 671 PMLVYTYSNVNLGTALA--PDYFPAINENHAVEK--PLYRDDIYVHPNKLRKGLCQDVNL 726
L+Y Y ++ P+ FPAI H K PL + + NK+ K +N
Sbjct: 570 ACLMYWYDKDAEFQYMSPWPEKFPAIERCHTRYKTIPLDAWHVEITHNKITK-----INK 624
Query: 727 K-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESII--IVQDK-VQVPSLKQVADQIL 782
LY FPTLKH++ + + V+VFQQ S E+++ I+ DK + ++ VA +L
Sbjct: 625 SALYFCGFPTLKHIKHKFYLRKSGVQVFQQSSHGENMMLEILADKNSKEQMVENVASSVL 684
Query: 783 GKTIFINYPHLIEIRVQAVATKDSRISFDK----------NSGPVFERA--AKDMQDAFQ 830
GK +F+N+PHL E RV AV+ +++ ++ N+ P + A Q +
Sbjct: 685 GKRVFVNWPHLEEARVVAVSDGETKFYLEEPHGTQKLYMGNAVPPTKVAYVGDKEQSTWV 744
Query: 831 LSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQS 890
+ I++ Y + G+ I T ++VY Q + +Y G+V ++ + + + + YQ+
Sbjct: 745 KEVQGISEQYQRRKGIIIHETSIVVYAQLLTGNRYQLKQNGEVYLEKQWSKQVLPFVYQT 804
Query: 891 AVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEENSFIKLSFK 947
V +++ KT+D++F PG F L +P+YG G V + V E I++ F
Sbjct: 805 VVKDIKAFDSRFSNIKTLDDLFPPGITAFMLGSPYYGCMGEVQDSRDVITEGR-IRVVFN 863
Query: 948 VQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEE---GAKR 1004
+ EP L L+ Q Y P+Y +AS+L +S L+SRFTGSIFI +++ G R
Sbjct: 864 IPCEPQLDPLIQNQHKYSVKYNPAYILASRLGVSGYLVSRFTGSIFIGRGSKKNPHGDHR 923
Query: 1005 HNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDD 1064
N+GLN+KF++KNEEV G+T++ +W Y+ V L+ Y+++ PE+F ++ ++ +D
Sbjct: 924 ANVGLNLKFNKKNEEVPGYTKK--VGNEWMYSSAVEQLLAEYLERVPELFTYIAKNNQED 981
Query: 1065 IYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCE 1121
I+ DD++P + G ++V +IV+WLK P + C ++DA +V IE ++ C+
Sbjct: 982 IFYEDDIWPGEDENGAEKVQEIVAWLKAHPVSALSRSSCDLQILDAAIVEKIEEEIEKCK 1041
Query: 1122 --KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIG 1179
K K++ + VKP+ LY P + + PD D +++LFDRVVN+R+ ++VP+G RGT+IG
Sbjct: 1042 QRKSNKKVRVTVKPHLLYRPLEQQNGVVPDRDAEYRLFDRVVNVRENFSVPVGLRGTVIG 1101
Query: 1180 IVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
I D +++V+FD+ F G+ IRCS +RGYR+P+ A+INLS+G R
Sbjct: 1102 IKGASRETDVLFEVLFDEEFLGGLTIRCSPARGYRLPSSALINLSHGSR 1150
Score = 185 bits (469), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/104 (79%), Positives = 94/104 (90%)
Query: 26 IPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAI 85
IPEFDNLYLDMNGIIH CSHPND+D HFRI+E +IF DIFHY+E+LFR+I+P+K+FFMA+
Sbjct: 1 IPEFDNLYLDMNGIIHQCSHPNDDDVHFRISEDKIFADIFHYLEVLFRIIKPRKVFFMAV 60
Query: 86 DGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 61 DGVAPRAKMNQQRGRRFRSAKEAEDKIKKALEKGETLPTEARFD 104
>gi|301615368|ref|XP_002937144.1| PREDICTED: 5'-3' exoribonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 1714
Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1130 (45%), Positives = 718/1130 (63%), Gaps = 51/1130 (4%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGEVLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPG FM RLH+ L+YFV +KI+TDK W+ V + LSGHETPGEGEHK
Sbjct: 130 SNCITPGNEFMARLHEHLKYFVNMKISTDK---------SWQGVAIYLSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K N+ +
Sbjct: 181 IMEFIRSQKTKPDHDPNTRHCLYGLDADLIMLGLTSHEVHFSLLREEVRFGGKKNQ--KR 238
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LK +SF + +E IIDDW+LMGFL+GNDFIP
Sbjct: 239 VTAPEETTFHLLHLSLMREYIDYEFSSLKNK--ISFEYDVERIIDDWILMGFLVGNDFIP 296
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY+ Y VLPT+ GYINE GYLNL F K+L KL+ FD E F E +
Sbjct: 297 HLPHLHINHDALPLLYRTYISVLPTIGGYINENGYLNLYNFGKYLEKLSDFDREHFNEIF 356
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYS 490
D+++ E K+G K+ + + ++E K + + L E Y
Sbjct: 357 VDLKWFESKVGNKYLNEAAGQAAEEAKNIKKKKNKVRIGEKNAFCFSALENNGEENSEYE 416
Query: 491 DEDEEWRTN--FFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGC 548
D +++ + F +EF Q+K YY K+ V++E L DQA+CY++AIQW LHYYY+G
Sbjct: 417 DPEDDENEDDLFETEFRQYKRTYYMSKMGVEVVSDEFLADQAKCYVQAIQWILHYYYHGV 476
Query: 549 VSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLM 608
SWSWYYP+HYAPY+SDI + SHL L + +G+PF+PF+QLLAVLPAASK+LLP YQNLM
Sbjct: 477 QSWSWYYPYHYAPYLSDICNISHLKLTFNLGKPFMPFEQLLAVLPAASKDLLPLTYQNLM 536
Query: 609 TLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
+SPI++YYP++F TDLNGK+Q+WEAVVLIPFIDE +L++AM + L +EE+ RN+
Sbjct: 537 ISSDSPIIDYYPQDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMVSCNRSLAEEEKKRNQ 596
Query: 669 HGPMLVYTYSNVNLGTALA--PDYFPAINENHAVEKPLYRDD--IYVHPNKLRKGLCQDV 724
H + Y Y + P+ FP+++ HA K + D + V NK+ K D
Sbjct: 597 HSECIKYWYEKETDFKYFSPWPEKFPSVDRCHARYKLISLDAWLVDVTDNKITK---VDK 653
Query: 725 NLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII---VQDKVQVPSLKQVADQI 781
+ LY FPTLKH++ + ++ A V+VFQQ SR E++I+ + ++ VA +
Sbjct: 654 S-ALYFCGFPTLKHIKHKYSMKKAGVQVFQQSSRGENMILEIETEGDEDTLNVDTVASAV 712
Query: 782 LGKTIFINYPHLIEIRVQAVATKDSRISFDKNSG-----------PVFERAAKDMQDAFQ 830
LGK++F+N+PHL E RV V D + ++ G P D +
Sbjct: 713 LGKSVFVNWPHLEEARVVTVTDGDMKFYLEERPGTQKLYTGNSVPPTKVAYVGDKERNIW 772
Query: 831 LSK-KSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQ 889
+ + + I++ Y+ + GV I T V++Y Q + R+Y G G+V ++ + + + + YQ
Sbjct: 773 VKEIQGISEHYHRRKGVVINETAVVLYAQLLTGRRYQLGHNGEVHLEKQWSKQVLPFVYQ 832
Query: 890 SAVLNLQQARE-SLEYKTIDEIFYPGCQCFALSNPHYGSGGCV--ISTVKEENSFIKLSF 946
+ V ++ S YKT+ E+F P F L P+YG G V S V EN I++
Sbjct: 833 AVVQDITTFESGSSHYKTLGELFSPESSVFMLGAPYYGCIGEVQESSDVLSENR-IRVLL 891
Query: 947 KVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEE---GAK 1003
+ EP L L+ Q Y P Y +AS+L ++ L+SRFTGSIFI +++ G +
Sbjct: 892 TIPCEPQLDALIQNQHKFSIKYNPGYVLASRLGVNGYLVSRFTGSIFIGRGSKKNPHGEQ 951
Query: 1004 RHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSD 1063
+ N+GLN+KF++KNEEV G+T+R T +W Y+ L+ Y+++FPE+F ++ S +
Sbjct: 952 KSNVGLNLKFNKKNEEVPGYTKRVGT--EWTYSSAAEVLLSEYIERFPELFLYVSKKSQE 1009
Query: 1064 DIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTC 1120
D++ DD++P + G ++V +IVSWLK P C ++DA +V IE V+ C
Sbjct: 1010 DVFYEDDIWPGENENGAEKVQEIVSWLKSHPVNMLSRSSCDLQILDAAIVEKIEEEVEKC 1069
Query: 1121 E-KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIG 1179
+ K ++ + VKP+ L+ P + PDPD +F+L+DRVVN+R+ ++VPLG RGT+IG
Sbjct: 1070 KSKKNSKVRVTVKPHLLFKPLEQQHGVVPDPDAEFRLYDRVVNVRENFSVPLGLRGTVIG 1129
Query: 1180 IVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGERL 1229
I E D + +V+FD+ FP G+ IRCS+ +GYR+P A+INLS+G R+
Sbjct: 1130 IKGAERDADVLLEVLFDEVFPGGLTIRCSQFKGYRLPTSALINLSHGNRM 1179
Score = 234 bits (597), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 105/129 (81%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRITE +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRITEDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 VLPTEARFD 129
>gi|338714846|ref|XP_001917535.2| PREDICTED: 5'-3' exoribonuclease 1 [Equus caballus]
Length = 1726
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 717/1137 (63%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LK+ ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKDK--IAFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K D + + A D + G E V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEAKSYKEKRKSKDQENSICWAALDTN---GEEVVAS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNVED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L++ +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISALSIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ + L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNYSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVNLGT--ALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RNRH L+ Y T + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNRHSECLMCWYDRDTEFTYPSPWPEKFPAIERCCTRYKMISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTL+H++ ++ + V+VFQQ SR E++ I+V + S++
Sbjct: 646 -ITRIDQKALYFCGFPTLRHIKHKFFLKKSGVQVFQQSSRGENMMLEILVNAESDDLSIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV V+ D++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVGVSDGDTKFYLEEPPGTQKLYLGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWTKEVQGISEFYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
+ + YQ+ V +++ +T+D++F P F L P+YG G V + V E
Sbjct: 824 VLPFVYQTIVKDIRAFDSRFSNIRTLDDLFPPRSMVFMLGTPYYGCTGEVQESGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFCY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|224060082|ref|XP_002195477.1| PREDICTED: 5'-3' exoribonuclease 1 [Taeniopygia guttata]
Length = 1699
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/1144 (44%), Positives = 723/1144 (63%), Gaps = 82/1144 (7%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKALEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RL++ L+YFV +KI+TDK W+ + V LSGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLNEHLKYFVNMKISTDK---------SWQGITVYLSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KP ++PN RHCLYGLDADLIMLGL +HE +F+LLREEV+F K +
Sbjct: 181 IMEFIRSEKAKPHHDPNTRHCLYGLDADLIMLGLTSHEAHFALLREEVRFGGKK---AQR 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF +K+ +SF + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSPVKDK--ISFEYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY+ Y +LP L GYINE G+LNL+RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYRTYMAILPELGGYINENGHLNLERFEKYLAKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF---------------HKEKSKEMDPDLAALIKATDDDYDDGT 475
D+++ E K+G K+ + K ++E LAAL K + T
Sbjct: 356 VDLKWFESKVGNKYLNEAAGIAAEEARKNKQKKQKVSAQENSISLAALEKNGGEVTPKTT 415
Query: 476 EEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIR 535
E DE E+ F +EF Q+K YY K+ V++ L DQAECY++
Sbjct: 416 LE-------------DEPED-DDLFETEFRQYKRTYYMTKMGVEVVSDAFLADQAECYVQ 461
Query: 536 AIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAA 595
AIQW LHYYY+G SWSWYYP+HYAPY+SDI + S L +K+E+G+PF+PF+QLLAVLPAA
Sbjct: 462 AIQWILHYYYHGVQSWSWYYPYHYAPYLSDIHNISELKIKFELGKPFMPFEQLLAVLPAA 521
Query: 596 SKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
SK+LLP+ YQ+LMT ++SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM++
Sbjct: 522 SKDLLPKCYQHLMTSQDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLQAMESC 581
Query: 656 EHLLTDEERSRNRHGPMLVYTYSNVNLGTALA--PDYFPAINENHAVEK--PLYRDDIYV 711
L +EE+ RN H L+Y Y L+ P+ FPAI H K PL + +
Sbjct: 582 NKGLKEEEKRRNTHSACLMYWYDKDAEFQYLSPWPEKFPAIERCHTRYKTIPLNAWHVEI 641
Query: 712 HPNKLRKGLCQDVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQD 767
NK+ K +N LY FPTLKH++ ++ + V+VFQQ S E++ IIV +
Sbjct: 642 THNKITK-----INKSALYFCGFPTLKHIKHKFYLKKSGVQVFQQSSHGENMMLEIIVDE 696
Query: 768 KVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSG-----------P 816
+ ++ VA +LGK +F+N+PHL E RV AV+ +++ ++ G P
Sbjct: 697 NSKDQMVENVASSVLGKRVFVNWPHLEEARVVAVSDGETKFFLEEPHGTQKLYMGNAVPP 756
Query: 817 VFERAAKDMQDAFQLSK-KSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQ 875
D + + + + + I++ Y + G+ I T V+VY Q + +Y G+V
Sbjct: 757 TKVAYVGDKEQSMWVKEVQGISEQYQRRKGIIIHETSVVVYAQLLTGNRYQLNQNGEVYL 816
Query: 876 QRTFIRSTVTYAYQSAVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCVIST 934
++ + + + + YQ+ V +++ KT+D++F PG F L +P+YG G V +
Sbjct: 817 EKQWSKQVLPFVYQTVVKDIKAFDSRFSSIKTLDDLFPPGSTAFMLGSPYYGCMGEVHDS 876
Query: 935 --VKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSI 992
V E I++ F + EP L L+ Q Y P+Y +AS+L +S L+SRFTGSI
Sbjct: 877 HDVIPEGR-IRVVFNIPCEPQLDTLIQNQHKYSVKYNPAYILASRLGVSGYLVSRFTGSI 935
Query: 993 FIIDSTEE---GAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQ 1049
FI +++ G + N+GLN+KF++KNEEV G+T++ +W Y+ V L+ Y+++
Sbjct: 936 FIGRGSKKNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGNEWMYSSAVEQLLAEYLER 993
Query: 1050 FPEVFGFLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVD 1106
PE+F ++ +S +DI DD++P + G ++V +IV+WLK P + C ++D
Sbjct: 994 VPELFNYVAKNSQEDICYEDDIWPGEDENGAEKVQEIVAWLKAHPVSALSRSSCDLQILD 1053
Query: 1107 AKVVSLIEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIR 1164
A +V IE V+ C+ K K++ + VKP+ LY P + PD D +++LFDRVVN+R
Sbjct: 1054 AAIVEKIEEEVEKCKQRKSNKKVRVTVKPHLLYRPLEQQKGVVPDRDAEYRLFDRVVNVR 1113
Query: 1165 DCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLS 1224
+ ++VP+G RGTIIGI D +++V+FD+ F G+ IRCS +RGYR+P+ A+INLS
Sbjct: 1114 ENFSVPVGLRGTIIGIKGATRETDVLFEVLFDEGFLGGLTIRCSPARGYRLPSSALINLS 1173
Query: 1225 YGER 1228
+G R
Sbjct: 1174 HGSR 1177
Score = 226 bits (577), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 100/129 (77%), Positives = 118/129 (91%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCL +V++E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI+E +I
Sbjct: 1 MGVPKFYRWISERYPCLIQVLKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISEDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F +IFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FANIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKALEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|293349379|ref|XP_001069029.2| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Rattus norvegicus]
gi|293361286|ref|XP_217233.5| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Rattus norvegicus]
Length = 1723
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/1158 (44%), Positives = 718/1158 (62%), Gaps = 87/1158 (7%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKEK--ITFKYDIEKIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFE++L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF--------------HKEKSKEMDPDLAALIK------ATDDD 470
D+++ E K+G K+ + K K +E AAL K A+ D+
Sbjct: 356 VDLKWFESKVGNKYLNEAAGAAAEEAKSCKDKRKVKGQENSLSWAALDKREGEGVASRDN 415
Query: 471 YDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQA 530
++D TE D+D F +EF Q+K YY K+ V++E L DQA
Sbjct: 416 FEDETE--------------DDDL-----FETEFRQYKRTYYMTKMGVDVVSDEFLADQA 456
Query: 531 ECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLA 590
CY++AIQW LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLA
Sbjct: 457 ACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLA 516
Query: 591 VLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIK 650
VLP+ASK LLP YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++
Sbjct: 517 VLPSASKTLLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLE 576
Query: 651 AMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALA--PDYFPAINENHAVEKPLYRDD 708
AM+ H L EER RN+H L+ Y + T + P+ FPAI K + D
Sbjct: 577 AMETCNHSLKKEERKRNQHSECLMCWYDSDTEFTYSSPWPEKFPAIERCSTRYKIISLDA 636
Query: 709 IYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIV 765
V NK + + + LY FPTLKH++ ++ + V+VFQQ SR E++ I V
Sbjct: 637 WRVDINKNK--ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEITV 694
Query: 766 QDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP--VFERAAK 823
+ S++ +A +LGK++F+N+PHL E RV AV+ +++ ++ G V+
Sbjct: 695 NAEPDELSIENIASSVLGKSVFVNWPHLEEARVVAVSDGETKFYMEEPPGTQKVYLGKTA 754
Query: 824 DMQDAFQLSKK----------SITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKV 873
QLS K I++ Y + G+ I T +VY Q + R+Y G+V
Sbjct: 755 PPCKVIQLSDKEQSNWTKEIQGISEQYLRRKGIMINETSAVVYAQLLTGRRYQVNQNGEV 814
Query: 874 TQQRTFIRSTVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVI 932
++ + + ++ + YQ+ V +++ KT+D++F P F L P+YG G V
Sbjct: 815 RLEKQWSKQSLPFVYQTIVKDVRAFDSRFSNIKTLDDLFPPRSVVFMLGTPYYGCTGEVQ 874
Query: 933 ST--VKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTG 990
+ V E I++ F + EP+L L+ Q Y P Y +A +L +S L+SRFTG
Sbjct: 875 DSGDVITEGR-IRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLAGRLGVSGYLVSRFTG 933
Query: 991 SIFIIDSTE---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYM 1047
SIFI + G + N+GLN+KF++KNEEV G+T+R +W Y+ L+ Y+
Sbjct: 934 SIFIGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKR--VGSEWMYSSAAEQLLAEYI 991
Query: 1048 KQFPEVFGFLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAV 1104
++ PE+F ++ +S +D++ DD++P + G ++V +I++WLK P + C +
Sbjct: 992 ERAPELFSYIAQNSQEDVFYEDDIWPGESESGAEKVQEIITWLKGHPVSTLSRSSCDLHI 1051
Query: 1105 VDAKVVSLIEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVN 1162
+DA +V IE V+ C+ K K++ + VKP+ L+ P PD D +F+LFDRVVN
Sbjct: 1052 LDAAIVEKIEEEVEKCKQRKNNKKVRVTVKPHLLFRPLEQQHGAIPDRDAEFRLFDRVVN 1111
Query: 1163 IRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMIN 1222
+R+ ++VP+G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++N
Sbjct: 1112 VRENFSVPVGLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVN 1171
Query: 1223 LSYGERLCGNSNPHVKNI 1240
LS+G R C N + I
Sbjct: 1172 LSHGSR-CETGNQKLTAI 1188
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|293349383|ref|XP_002727167.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Rattus norvegicus]
gi|293361290|ref|XP_002730003.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Rattus norvegicus]
gi|149018866|gb|EDL77507.1| rCG25308 [Rattus norvegicus]
Length = 1685
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/1158 (44%), Positives = 718/1158 (62%), Gaps = 87/1158 (7%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKEK--ITFKYDIEKIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFE++L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF--------------HKEKSKEMDPDLAALIK------ATDDD 470
D+++ E K+G K+ + K K +E AAL K A+ D+
Sbjct: 356 VDLKWFESKVGNKYLNEAAGAAAEEAKSCKDKRKVKGQENSLSWAALDKREGEGVASRDN 415
Query: 471 YDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQA 530
++D TE D+D F +EF Q+K YY K+ V++E L DQA
Sbjct: 416 FEDETE--------------DDDL-----FETEFRQYKRTYYMTKMGVDVVSDEFLADQA 456
Query: 531 ECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLA 590
CY++AIQW LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLA
Sbjct: 457 ACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLA 516
Query: 591 VLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIK 650
VLP+ASK LLP YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++
Sbjct: 517 VLPSASKTLLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLE 576
Query: 651 AMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALA--PDYFPAINENHAVEKPLYRDD 708
AM+ H L EER RN+H L+ Y + T + P+ FPAI K + D
Sbjct: 577 AMETCNHSLKKEERKRNQHSECLMCWYDSDTEFTYSSPWPEKFPAIERCSTRYKIISLDA 636
Query: 709 IYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIV 765
V NK + + + LY FPTLKH++ ++ + V+VFQQ SR E++ I V
Sbjct: 637 WRVDINKNK--ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEITV 694
Query: 766 QDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP--VFERAAK 823
+ S++ +A +LGK++F+N+PHL E RV AV+ +++ ++ G V+
Sbjct: 695 NAEPDELSIENIASSVLGKSVFVNWPHLEEARVVAVSDGETKFYMEEPPGTQKVYLGKTA 754
Query: 824 DMQDAFQLSKK----------SITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKV 873
QLS K I++ Y + G+ I T +VY Q + R+Y G+V
Sbjct: 755 PPCKVIQLSDKEQSNWTKEIQGISEQYLRRKGIMINETSAVVYAQLLTGRRYQVNQNGEV 814
Query: 874 TQQRTFIRSTVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVI 932
++ + + ++ + YQ+ V +++ KT+D++F P F L P+YG G V
Sbjct: 815 RLEKQWSKQSLPFVYQTIVKDVRAFDSRFSNIKTLDDLFPPRSVVFMLGTPYYGCTGEVQ 874
Query: 933 ST--VKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTG 990
+ V E I++ F + EP+L L+ Q Y P Y +A +L +S L+SRFTG
Sbjct: 875 DSGDVITEGR-IRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLAGRLGVSGYLVSRFTG 933
Query: 991 SIFIIDSTE---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYM 1047
SIFI + G + N+GLN+KF++KNEEV G+T+R +W Y+ L+ Y+
Sbjct: 934 SIFIGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKR--VGSEWMYSSAAEQLLAEYI 991
Query: 1048 KQFPEVFGFLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAV 1104
++ PE+F ++ +S +D++ DD++P + G ++V +I++WLK P + C +
Sbjct: 992 ERAPELFSYIAQNSQEDVFYEDDIWPGESESGAEKVQEIITWLKGHPVSTLSRSSCDLHI 1051
Query: 1105 VDAKVVSLIEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVN 1162
+DA +V IE V+ C+ K K++ + VKP+ L+ P PD D +F+LFDRVVN
Sbjct: 1052 LDAAIVEKIEEEVEKCKQRKNNKKVRVTVKPHLLFRPLEQQHGAIPDRDAEFRLFDRVVN 1111
Query: 1163 IRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMIN 1222
+R+ ++VP+G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++N
Sbjct: 1112 VRENFSVPVGLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVN 1171
Query: 1223 LSYGERLCGNSNPHVKNI 1240
LS+G R C N + I
Sbjct: 1172 LSHGSR-CETGNQKLTAI 1188
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|392342051|ref|XP_003754494.1| PREDICTED: 5'-3' exoribonuclease 1 [Rattus norvegicus]
gi|392350274|ref|XP_003750610.1| PREDICTED: 5'-3' exoribonuclease 1 [Rattus norvegicus]
Length = 1706
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/1158 (44%), Positives = 718/1158 (62%), Gaps = 87/1158 (7%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKEK--ITFKYDIEKIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFE++L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF--------------HKEKSKEMDPDLAALIK------ATDDD 470
D+++ E K+G K+ + K K +E AAL K A+ D+
Sbjct: 356 VDLKWFESKVGNKYLNEAAGAAAEEAKSCKDKRKVKGQENSLSWAALDKREGEGVASRDN 415
Query: 471 YDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQA 530
++D TE D+D F +EF Q+K YY K+ V++E L DQA
Sbjct: 416 FEDETE--------------DDDL-----FETEFRQYKRTYYMTKMGVDVVSDEFLADQA 456
Query: 531 ECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLA 590
CY++AIQW LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLA
Sbjct: 457 ACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLA 516
Query: 591 VLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIK 650
VLP+ASK LLP YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++
Sbjct: 517 VLPSASKTLLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLE 576
Query: 651 AMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALA--PDYFPAINENHAVEKPLYRDD 708
AM+ H L EER RN+H L+ Y + T + P+ FPAI K + D
Sbjct: 577 AMETCNHSLKKEERKRNQHSECLMCWYDSDTEFTYSSPWPEKFPAIERCSTRYKIISLDA 636
Query: 709 IYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIV 765
V NK + + + LY FPTLKH++ ++ + V+VFQQ SR E++ I V
Sbjct: 637 WRVDINKNK--ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEITV 694
Query: 766 QDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP--VFERAAK 823
+ S++ +A +LGK++F+N+PHL E RV AV+ +++ ++ G V+
Sbjct: 695 NAEPDELSIENIASSVLGKSVFVNWPHLEEARVVAVSDGETKFYMEEPPGTQKVYLGKTA 754
Query: 824 DMQDAFQLSKK----------SITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKV 873
QLS K I++ Y + G+ I T +VY Q + R+Y G+V
Sbjct: 755 PPCKVIQLSDKEQSNWTKEIQGISEQYLRRKGIMINETSAVVYAQLLTGRRYQVNQNGEV 814
Query: 874 TQQRTFIRSTVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVI 932
++ + + ++ + YQ+ V +++ KT+D++F P F L P+YG G V
Sbjct: 815 RLEKQWSKQSLPFVYQTIVKDVRAFDSRFSNIKTLDDLFPPRSVVFMLGTPYYGCTGEVQ 874
Query: 933 ST--VKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTG 990
+ V E I++ F + EP+L L+ Q Y P Y +A +L +S L+SRFTG
Sbjct: 875 DSGDVITEGR-IRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLAGRLGVSGYLVSRFTG 933
Query: 991 SIFIIDSTE---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYM 1047
SIFI + G + N+GLN+KF++KNEEV G+T+R +W Y+ L+ Y+
Sbjct: 934 SIFIGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKR--VGSEWMYSSAAEQLLAEYI 991
Query: 1048 KQFPEVFGFLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAV 1104
++ PE+F ++ +S +D++ DD++P + G ++V +I++WLK P + C +
Sbjct: 992 ERAPELFSYIAQNSQEDVFYEDDIWPGESESGAEKVQEIITWLKGHPVSTLSRSSCDLHI 1051
Query: 1105 VDAKVVSLIEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVN 1162
+DA +V IE V+ C+ K K++ + VKP+ L+ P PD D +F+LFDRVVN
Sbjct: 1052 LDAAIVEKIEEEVEKCKQRKNNKKVRVTVKPHLLFRPLEQQHGAIPDRDAEFRLFDRVVN 1111
Query: 1163 IRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMIN 1222
+R+ ++VP+G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++N
Sbjct: 1112 VRENFSVPVGLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVN 1171
Query: 1223 LSYGERLCGNSNPHVKNI 1240
LS+G R C N + I
Sbjct: 1172 LSHGSR-CETGNQKLTAI 1188
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|291399905|ref|XP_002716611.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Oryctolagus cuniculus]
Length = 1727
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/1132 (44%), Positives = 711/1132 (62%), Gaps = 60/1132 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYD-----DGTEEVLNYANYE 485
D+++ E K+G K+ + ++E ++ D E V + N E
Sbjct: 356 VDLKWFESKVGNKYLNEAAGIAAEEAKNYKEKKKSKGQENSICWAALDKNEVVTSKDNLE 415
Query: 486 EYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYY 545
+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW LHYYY
Sbjct: 416 D---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYYY 469
Query: 546 NGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQ 605
+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP YQ
Sbjct: 470 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQ 529
Query: 606 NLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERS 665
+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+A H L EER
Sbjct: 530 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEERK 589
Query: 666 RNRHGPMLVYTYSNVNLGT--ALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQD 723
RN+H L+ Y T + P+ FPAI A K + D V NK + + +
Sbjct: 590 RNQHSECLMCWYDGETEFTYPSPWPEKFPAIERCCARYKIISLDAWRVDINKNK--ITKV 647
Query: 724 VNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQVADQ 780
LY FP+LKH++ ++ + V+VFQQ SR E++ I++ S++ VA
Sbjct: 648 DQKALYFCGFPSLKHIKHNFFLKKSGVQVFQQSSRGENMMLEILMNTGSDELSIENVASS 707
Query: 781 ILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAAKDMQD 827
+LGK++F+N+PHL E RV AV+ +++ ++ G V K+ Q
Sbjct: 708 VLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYLGRTAPPSKVVHLGDKE-QS 766
Query: 828 AFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYA 887
+ + I++ Y + G+ I T +VY Q + RKY G+V ++ + + + +
Sbjct: 767 NWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQVLPFV 826
Query: 888 YQSAVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCV--ISTVKEENSFIKL 944
YQ+ V +++ KT+D++F P F L P+YG G V S V E I++
Sbjct: 827 YQTIVKDIRAFDSRFSSIKTLDDLFPPRSMVFMLGTPYYGCTGEVQDSSDVITEGR-IRV 885
Query: 945 SFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE---EG 1001
F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI + G
Sbjct: 886 VFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHG 945
Query: 1002 AKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHS 1061
+ N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F ++ +S
Sbjct: 946 DHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSYIAKNS 1003
Query: 1062 SDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD 1118
+D++ DD++P + G ++V +I +WLK P + C ++DA +V IE V+
Sbjct: 1004 QEDVFYEDDIWPGENENGAEKVQEITTWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVE 1063
Query: 1119 TCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGT 1176
C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+G RGT
Sbjct: 1064 KCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPVGLRGT 1123
Query: 1177 IIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
IIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1124 IIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1175
Score = 233 bits (594), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 104/129 (80%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI+E +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISEDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|73990326|ref|XP_852437.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Canis lupus familiaris]
Length = 1705
Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1138 (44%), Positives = 716/1138 (62%), Gaps = 70/1138 (6%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKALEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHETHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF +LK ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSELK--AKITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + A A D + G E V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKSKGQENAICWAALDKN---GEEVVTS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+A H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVNLGT--ALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y T + P+ FPAI K + D V + K
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFTYPSPWPEKFPAIERCCTRYKIISLDAWRV---DISK 643
Query: 719 GLCQDVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSL 774
V+ K LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + ++
Sbjct: 644 NKITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVNAESDELNV 703
Query: 775 KQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERA 821
+ +A +LGK++F+N+PHL E RV V+ +++ ++ G V
Sbjct: 704 ENIASSVLGKSVFVNWPHLEEARVVGVSDGETKFYLEEPPGTQKLYLGRTAPPSKVVHLG 763
Query: 822 AKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIR 881
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 764 DKE-QSNWTKEVQGISEYYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSK 822
Query: 882 STVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEE 938
+ + YQ+ V +++ KT+D++F P F L P+YG G V + V E
Sbjct: 823 QVLPFVYQTIVKDIRAFDSRFSNIKTLDDLFPPRSMVFMLGTPYYGCTGEVQDSGDVITE 882
Query: 939 NSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDST 998
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 883 GR-IRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGS 941
Query: 999 E---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFG 1055
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F
Sbjct: 942 RRNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFS 999
Query: 1056 FLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSL 1112
++ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V
Sbjct: 1000 YIAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEK 1059
Query: 1113 IEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVP 1170
IE V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP
Sbjct: 1060 IEEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVP 1119
Query: 1171 LGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
+G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NL++G R
Sbjct: 1120 VGLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTCALVNLTHGSR 1177
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKALEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|293349381|ref|XP_002727166.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Rattus norvegicus]
gi|293361288|ref|XP_002730002.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Rattus norvegicus]
Length = 1686
Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/1158 (44%), Positives = 718/1158 (62%), Gaps = 87/1158 (7%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKEK--ITFKYDIEKIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFE++L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF--------------HKEKSKEMDPDLAALIK------ATDDD 470
D+++ E K+G K+ + K K +E AAL K A+ D+
Sbjct: 356 VDLKWFESKVGNKYLNEAAGAAAEEAKSCKDKRKVKGQENSLSWAALDKREGEGVASRDN 415
Query: 471 YDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQA 530
++D TE D+D F +EF Q+K YY K+ V++E L DQA
Sbjct: 416 FEDETE--------------DDDL-----FETEFRQYKRTYYMTKMGVDVVSDEFLADQA 456
Query: 531 ECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLA 590
CY++AIQW LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLA
Sbjct: 457 ACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLA 516
Query: 591 VLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIK 650
VLP+ASK LLP YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++
Sbjct: 517 VLPSASKTLLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLE 576
Query: 651 AMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALA--PDYFPAINENHAVEKPLYRDD 708
AM+ H L EER RN+H L+ Y + T + P+ FPAI K + D
Sbjct: 577 AMETCNHSLKKEERKRNQHSECLMCWYDSDTEFTYSSPWPEKFPAIERCSTRYKIISLDA 636
Query: 709 IYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIV 765
V NK + + + LY FPTLKH++ ++ + V+VFQQ SR E++ I V
Sbjct: 637 WRVDINKNK--ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEITV 694
Query: 766 QDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP--VFERAAK 823
+ S++ +A +LGK++F+N+PHL E RV AV+ +++ ++ G V+
Sbjct: 695 NAEPDELSIENIASSVLGKSVFVNWPHLEEARVVAVSDGETKFYMEEPPGTQKVYLGKTA 754
Query: 824 DMQDAFQLSKK----------SITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKV 873
QLS K I++ Y + G+ I T +VY Q + R+Y G+V
Sbjct: 755 PPCKVIQLSDKEQSNWTKEIQGISEQYLRRKGIMINETSAVVYAQLLTGRRYQVNQNGEV 814
Query: 874 TQQRTFIRSTVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVI 932
++ + + ++ + YQ+ V +++ KT+D++F P F L P+YG G V
Sbjct: 815 RLEKQWSKQSLPFVYQTIVKDVRAFDSRFSNIKTLDDLFPPRSVVFMLGTPYYGCTGEVQ 874
Query: 933 ST--VKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTG 990
+ V E I++ F + EP+L L+ Q Y P Y +A +L +S L+SRFTG
Sbjct: 875 DSGDVITEGR-IRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLAGRLGVSGYLVSRFTG 933
Query: 991 SIFIIDSTE---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYM 1047
SIFI + G + N+GLN+KF++KNEEV G+T+R +W Y+ L+ Y+
Sbjct: 934 SIFIGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKR--VGSEWMYSSAAEQLLAEYI 991
Query: 1048 KQFPEVFGFLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAV 1104
++ PE+F ++ +S +D++ DD++P + G ++V +I++WLK P + C +
Sbjct: 992 ERAPELFSYIAQNSQEDVFYEDDIWPGESESGAEKVQEIITWLKGHPVSTLSRSSCDLHI 1051
Query: 1105 VDAKVVSLIEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVN 1162
+DA +V IE V+ C+ K K++ + VKP+ L+ P PD D +F+LFDRVVN
Sbjct: 1052 LDAAIVEKIEEEVEKCKQRKNNKKVRVTVKPHLLFRPLEQQHGAIPDRDAEFRLFDRVVN 1111
Query: 1163 IRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMIN 1222
+R+ ++VP+G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++N
Sbjct: 1112 VRENFSVPVGLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVN 1171
Query: 1223 LSYGERLCGNSNPHVKNI 1240
LS+G R C N + I
Sbjct: 1172 LSHGSR-CETGNQKLTAI 1188
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|291399907|ref|XP_002716612.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Oryctolagus cuniculus]
Length = 1702
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/1132 (44%), Positives = 711/1132 (62%), Gaps = 60/1132 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYD-----DGTEEVLNYANYE 485
D+++ E K+G K+ + ++E ++ D E V + N E
Sbjct: 356 VDLKWFESKVGNKYLNEAAGIAAEEAKNYKEKKKSKGQENSICWAALDKNEVVTSKDNLE 415
Query: 486 EYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYY 545
+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW LHYYY
Sbjct: 416 D---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYYY 469
Query: 546 NGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQ 605
+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP YQ
Sbjct: 470 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQ 529
Query: 606 NLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERS 665
+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+A H L EER
Sbjct: 530 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEERK 589
Query: 666 RNRHGPMLVYTYSNVNLGT--ALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQD 723
RN+H L+ Y T + P+ FPAI A K + D V NK + + +
Sbjct: 590 RNQHSECLMCWYDGETEFTYPSPWPEKFPAIERCCARYKIISLDAWRVDINKNK--ITKV 647
Query: 724 VNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQVADQ 780
LY FP+LKH++ ++ + V+VFQQ SR E++ I++ S++ VA
Sbjct: 648 DQKALYFCGFPSLKHIKHNFFLKKSGVQVFQQSSRGENMMLEILMNTGSDELSIENVASS 707
Query: 781 ILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAAKDMQD 827
+LGK++F+N+PHL E RV AV+ +++ ++ G V K+ Q
Sbjct: 708 VLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYLGRTAPPSKVVHLGDKE-QS 766
Query: 828 AFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYA 887
+ + I++ Y + G+ I T +VY Q + RKY G+V ++ + + + +
Sbjct: 767 NWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQVLPFV 826
Query: 888 YQSAVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCV--ISTVKEENSFIKL 944
YQ+ V +++ KT+D++F P F L P+YG G V S V E I++
Sbjct: 827 YQTIVKDIRAFDSRFSSIKTLDDLFPPRSMVFMLGTPYYGCTGEVQDSSDVITEGR-IRV 885
Query: 945 SFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE---EG 1001
F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI + G
Sbjct: 886 VFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHG 945
Query: 1002 AKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHS 1061
+ N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F ++ +S
Sbjct: 946 DHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSYIAKNS 1003
Query: 1062 SDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD 1118
+D++ DD++P + G ++V +I +WLK P + C ++DA +V IE V+
Sbjct: 1004 QEDVFYEDDIWPGENENGAEKVQEITTWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVE 1063
Query: 1119 TCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGT 1176
C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+G RGT
Sbjct: 1064 KCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPVGLRGT 1123
Query: 1177 IIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
IIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1124 IIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1175
Score = 233 bits (594), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 104/129 (80%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI+E +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISEDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|291399909|ref|XP_002716613.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Oryctolagus cuniculus]
Length = 1690
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/1132 (44%), Positives = 711/1132 (62%), Gaps = 60/1132 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYD-----DGTEEVLNYANYE 485
D+++ E K+G K+ + ++E ++ D E V + N E
Sbjct: 356 VDLKWFESKVGNKYLNEAAGIAAEEAKNYKEKKKSKGQENSICWAALDKNEVVTSKDNLE 415
Query: 486 EYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYY 545
+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW LHYYY
Sbjct: 416 D---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYYY 469
Query: 546 NGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQ 605
+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP YQ
Sbjct: 470 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQ 529
Query: 606 NLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERS 665
+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+A H L EER
Sbjct: 530 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEERK 589
Query: 666 RNRHGPMLVYTYSNVNLGT--ALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQD 723
RN+H L+ Y T + P+ FPAI A K + D V NK + + +
Sbjct: 590 RNQHSECLMCWYDGETEFTYPSPWPEKFPAIERCCARYKIISLDAWRVDINKNK--ITKV 647
Query: 724 VNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQVADQ 780
LY FP+LKH++ ++ + V+VFQQ SR E++ I++ S++ VA
Sbjct: 648 DQKALYFCGFPSLKHIKHNFFLKKSGVQVFQQSSRGENMMLEILMNTGSDELSIENVASS 707
Query: 781 ILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAAKDMQD 827
+LGK++F+N+PHL E RV AV+ +++ ++ G V K+ Q
Sbjct: 708 VLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYLGRTAPPSKVVHLGDKE-QS 766
Query: 828 AFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYA 887
+ + I++ Y + G+ I T +VY Q + RKY G+V ++ + + + +
Sbjct: 767 NWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQVLPFV 826
Query: 888 YQSAVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCV--ISTVKEENSFIKL 944
YQ+ V +++ KT+D++F P F L P+YG G V S V E I++
Sbjct: 827 YQTIVKDIRAFDSRFSSIKTLDDLFPPRSMVFMLGTPYYGCTGEVQDSSDVITEGR-IRV 885
Query: 945 SFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE---EG 1001
F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI + G
Sbjct: 886 VFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHG 945
Query: 1002 AKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHS 1061
+ N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F ++ +S
Sbjct: 946 DHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSYIAKNS 1003
Query: 1062 SDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD 1118
+D++ DD++P + G ++V +I +WLK P + C ++DA +V IE V+
Sbjct: 1004 QEDVFYEDDIWPGENENGAEKVQEITTWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVE 1063
Query: 1119 TCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGT 1176
C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+G RGT
Sbjct: 1064 KCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPVGLRGT 1123
Query: 1177 IIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
IIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1124 IIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1175
Score = 233 bits (594), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 104/129 (80%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI+E +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISEDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|345789293|ref|XP_534294.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Canis lupus familiaris]
Length = 1692
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1138 (44%), Positives = 716/1138 (62%), Gaps = 70/1138 (6%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKALEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHETHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF +LK ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSELK--AKITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + A A D + G E V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKSKGQENAICWAALDKN---GEEVVTS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+A H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVNLGT--ALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y T + P+ FPAI K + D V + K
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFTYPSPWPEKFPAIERCCTRYKIISLDAWRV---DISK 643
Query: 719 GLCQDVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSL 774
V+ K LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + ++
Sbjct: 644 NKITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVNAESDELNV 703
Query: 775 KQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERA 821
+ +A +LGK++F+N+PHL E RV V+ +++ ++ G V
Sbjct: 704 ENIASSVLGKSVFVNWPHLEEARVVGVSDGETKFYLEEPPGTQKLYLGRTAPPSKVVHLG 763
Query: 822 AKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIR 881
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 764 DKE-QSNWTKEVQGISEYYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSK 822
Query: 882 STVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEE 938
+ + YQ+ V +++ KT+D++F P F L P+YG G V + V E
Sbjct: 823 QVLPFVYQTIVKDIRAFDSRFSNIKTLDDLFPPRSMVFMLGTPYYGCTGEVQDSGDVITE 882
Query: 939 NSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDST 998
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 883 GR-IRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGS 941
Query: 999 E---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFG 1055
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F
Sbjct: 942 RRNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFS 999
Query: 1056 FLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSL 1112
++ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V
Sbjct: 1000 YIAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEK 1059
Query: 1113 IEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVP 1170
IE V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP
Sbjct: 1060 IEEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVP 1119
Query: 1171 LGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
+G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NL++G R
Sbjct: 1120 VGLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTCALVNLTHGSR 1177
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKALEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|350591616|ref|XP_003132505.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Sus scrofa]
Length = 1691
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/1134 (44%), Positives = 711/1134 (62%), Gaps = 62/1134 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LK+ ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKDK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD------YDDGTEEVLNYANY 484
D+++ E K+G K+ + ++E ++ D EEV+ +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEAKNYKEKKKTKGQENSVCWAALDKNGEEVVTSKDN 415
Query: 485 EEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYY 544
E D+D F +EF Q+K YY K+ V+++ L DQA CY++AIQW LHYY
Sbjct: 416 LEDETEDDDL-----FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYY 470
Query: 545 YNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPY 604
Y+G SWSW+YP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP Y
Sbjct: 471 YHGVQSWSWFYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCY 530
Query: 605 QNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEER 664
Q+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L EER
Sbjct: 531 QHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEER 590
Query: 665 SRNRHGPMLVYTYSNVNLGT--ALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQ 722
RN+H L+ Y T + P+ FPAI H + + D V + K
Sbjct: 591 KRNQHSECLMCWYDGDTEFTYPSPWPEKFPAIERCHTRYRIISLDAWRV---DISKNKIT 647
Query: 723 DVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQVA 778
V+ K LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + S++ +A
Sbjct: 648 RVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVNAESDELSVENIA 707
Query: 779 DQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAAKDM 825
+LGK++F+N+PHL E RV ++ +++ ++ G V K+
Sbjct: 708 SSVLGKSVFVNWPHLEEARVVGISDGETKFYLEEPPGTQKLYLGRTVPPSKVVHLGDKE- 766
Query: 826 QDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT 885
Q + + I++ Y + G+ I T +VYGQ + RKY G+V ++ + + +
Sbjct: 767 QSNWTKEVQGISEYYLRRKGIIINETSAVVYGQLLTGRKYQINQNGEVRLEKQWSKQVLP 826
Query: 886 YAYQSAVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEENSFI 942
+ YQ+ V +++ KT+D++F P F L P+YG G V + V E I
Sbjct: 827 FVYQTIVKDVRAFDSRFSSIKTLDDLFPPRSMVFMLGTPYYGCTGEVQDSGDVITEGR-I 885
Query: 943 KLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE--- 999
++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 886 RVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNP 945
Query: 1000 EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKD 1059
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F ++
Sbjct: 946 HGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSYIAK 1003
Query: 1060 HSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHA 1116
+S +D++ DD++P + G ++V +I++WLK P + C ++DA +V IE
Sbjct: 1004 NSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEE 1063
Query: 1117 VDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYR 1174
V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+G R
Sbjct: 1064 VEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPIGLR 1123
Query: 1175 GTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
GTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1124 GTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|81861755|sp|P97789.1|XRN1_MOUSE RecName: Full=5'-3' exoribonuclease 1; Short=mXRN1; AltName:
Full=Protein Dhm2; AltName: Full=Strand-exchange protein
1 homolog
gi|1894791|emb|CAA62819.1| 5'-3' exonuclease [Mus musculus]
Length = 1719
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/1149 (44%), Positives = 715/1149 (62%), Gaps = 69/1149 (6%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKEK--ITFKYDIEKIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFE++L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFH----------KEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + KEK K + + A D +G V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGAAAEEAKNCKEKRKPKGQENSLSWAALDKSEGEG---VAS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N+E+ ED++ F +EF Q+K YY K+ V++E L +QA CY++AIQW
Sbjct: 413 RDNFED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDEFLANQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI+ S L + +E+G+PF PF+QLLAVLP+ASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVNLGTALA--PDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y T + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFTYSSPWPEKFPAIERCCTRYKMISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII---VQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++++ V + ++
Sbjct: 646 -ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENLMLEISVNAEPDELRIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP--VFERAAKDMQDAFQLSK 833
+A +LGK +F+N+PHL E RV AV+ +++ ++ G V+ QL+
Sbjct: 705 NIASAVLGKAVFVNWPHLEEARVVAVSDGETKFYIEEPPGTQKVYLGKTAPPSKVIQLTD 764
Query: 834 K----------SITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRST 883
K I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KEQSNWTKEIQGISEQYLRRKGIIINETSAVVYAQLLTGRKYQISQNGEVRLEKQWSKQI 824
Query: 884 VTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST---VKEEN 939
+ + YQ+ V +++ KT+D++F P F L P+YG G V + + E
Sbjct: 825 LPFVYQTIVKDIRAFDSRFSNIKTLDDLFPPRTMVFMLGTPYYGCTGEVQDSGDLITEGR 884
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +A +L +S L+SRFTGSIFI +
Sbjct: 885 --IRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLAGRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGNEWMYSSAAEQLLAEYIERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLHILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ +Y P + PD D +F+LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKSNKKVRVTVKPHLMYRPLEQQHGVIPDRDAEFRLFDRVVNVRESFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGERLCG 1231
G RGT+IGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R C
Sbjct: 1121 GLRGTVIGIKGASREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR-CE 1179
Query: 1232 NSNPHVKNI 1240
N + I
Sbjct: 1180 TGNQKLTAI 1188
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|115495455|ref|NP_036046.2| 5'-3' exoribonuclease 1 [Mus musculus]
gi|162318350|gb|AAI56977.1| 5'-3' exoribonuclease 1 [synthetic construct]
gi|162319526|gb|AAI56134.1| 5'-3' exoribonuclease 1 [synthetic construct]
Length = 1723
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/1149 (44%), Positives = 715/1149 (62%), Gaps = 69/1149 (6%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKEK--ITFKYDIEKIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFE++L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFH----------KEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + KEK K + + A D +G V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGAAAEEAKNCKEKRKPKGQENSLSWAALDKSEGEG---VAS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N+E+ ED++ F +EF Q+K YY K+ V++E L +QA CY++AIQW
Sbjct: 413 RDNFED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDEFLANQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI+ S L + +E+G+PF PF+QLLAVLP+ASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVNLGTALA--PDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y T + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFTYSSPWPEKFPAIERCCTRYKMISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII---VQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++++ V + ++
Sbjct: 646 -ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENLMLEISVNAEPDELRIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP--VFERAAKDMQDAFQLSK 833
+A +LGK +F+N+PHL E RV AV+ +++ ++ G V+ QL+
Sbjct: 705 NIASAVLGKAVFVNWPHLEEARVVAVSDGETKFYIEEPPGTQKVYLGKTAPPSKVIQLTD 764
Query: 834 K----------SITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRST 883
K I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KEQSNWTKEIQGISEQYLRRKGIIINETSAVVYAQLLTGRKYQISQNGEVRLEKQWSKQI 824
Query: 884 VTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST---VKEEN 939
+ + YQ+ V +++ KT+D++F P F L P+YG G V + + E
Sbjct: 825 LPFVYQTIVKDIRAFDSRFSNIKTLDDLFPPRTMVFMLGTPYYGCTGEVQDSGDLITEGR 884
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +A +L +S L+SRFTGSIFI +
Sbjct: 885 --IRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLAGRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGNEWMYSSAAEQLLAEYIERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLHILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKSNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRESFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGERLCG 1231
G RGT+IGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R C
Sbjct: 1121 GLRGTVIGIKGASREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR-CE 1179
Query: 1232 NSNPHVKNI 1240
N + I
Sbjct: 1180 TGNQKLTAI 1188
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|1894792|emb|CAA62820.1| 5'-3' exonuclease [Mus musculus]
Length = 1706
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/1149 (44%), Positives = 715/1149 (62%), Gaps = 69/1149 (6%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKEK--ITFKYDIEKIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFE++L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFH----------KEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + KEK K + + A D +G V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGAAAEEAKNCKEKRKPKGQENSLSWAALDKSEGEG---VAS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N+E+ ED++ F +EF Q+K YY K+ V++E L +QA CY++AIQW
Sbjct: 413 RDNFED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDEFLANQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI+ S L + +E+G+PF PF+QLLAVLP+ASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVNLGTALA--PDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y T + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFTYSSPWPEKFPAIERCCTRYKMISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII---VQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++++ V + ++
Sbjct: 646 -ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENLMLEISVNAEPDELRIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP--VFERAAKDMQDAFQLSK 833
+A +LGK +F+N+PHL E RV AV+ +++ ++ G V+ QL+
Sbjct: 705 NIASAVLGKAVFVNWPHLEEARVVAVSDGETKFYIEEPPGTQKVYLGKTAPPSKVIQLTD 764
Query: 834 K----------SITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRST 883
K I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KEQSNWTKEIQGISEQYLRRKGIIINETSAVVYAQLLTGRKYQISQNGEVRLEKQWSKQI 824
Query: 884 VTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST---VKEEN 939
+ + YQ+ V +++ KT+D++F P F L P+YG G V + + E
Sbjct: 825 LPFVYQTIVKDIRAFDSRFSNIKTLDDLFPPRTMVFMLGTPYYGCTGEVQDSGDLITEGR 884
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +A +L +S L+SRFTGSIFI +
Sbjct: 885 --IRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLAGRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGNEWMYSSAAEQLLAEYIERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLHILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ +Y P + PD D +F+LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKSNKKVRVTVKPHLMYRPLEQQHGVIPDRDAEFRLFDRVVNVRESFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGERLCG 1231
G RGT+IGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R C
Sbjct: 1121 GLRGTVIGIKGASREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR-CE 1179
Query: 1232 NSNPHVKNI 1240
N + I
Sbjct: 1180 TGNQKLTAI 1188
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|148688999|gb|EDL20946.1| 5'-3' exoribonuclease 1 [Mus musculus]
Length = 1685
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/1149 (44%), Positives = 715/1149 (62%), Gaps = 69/1149 (6%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKEK--ITFKYDIEKIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFE++L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFH----------KEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + KEK K + + A D +G V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGAAAEEAKNCKEKRKPKGQENSLSWAALDKSEGEG---VAS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N+E+ ED++ F +EF Q+K YY K+ V++E L +QA CY++AIQW
Sbjct: 413 RDNFED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDEFLANQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI+ S L + +E+G+PF PF+QLLAVLP+ASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVNLGTALA--PDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y T + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFTYSSPWPEKFPAIERCCTRYKMISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII---VQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++++ V + ++
Sbjct: 646 -ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENLMLEISVNAEPDELRIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP--VFERAAKDMQDAFQLSK 833
+A +LGK +F+N+PHL E RV AV+ +++ ++ G V+ QL+
Sbjct: 705 NIASAVLGKAVFVNWPHLEEARVVAVSDGETKFYIEEPPGTQKVYLGKTAPPSKVIQLTD 764
Query: 834 K----------SITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRST 883
K I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KEQSNWTKEIQGISEQYLRRKGIIINETSAVVYAQLLTGRKYQISQNGEVRLEKQWSKQI 824
Query: 884 VTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST---VKEEN 939
+ + YQ+ V +++ KT+D++F P F L P+YG G V + + E
Sbjct: 825 LPFVYQTIVKDIRAFDSRFSNIKTLDDLFPPRTMVFMLGTPYYGCTGEVQDSGDLITEGR 884
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +A +L +S L+SRFTGSIFI +
Sbjct: 885 --IRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLAGRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGNEWMYSSAAEQLLAEYIERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLHILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKSNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRESFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGERLCG 1231
G RGT+IGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R C
Sbjct: 1121 GLRGTVIGIKGASREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR-CE 1179
Query: 1232 NSNPHVKNI 1240
N + I
Sbjct: 1180 TGNQKLTAI 1188
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|350591614|ref|XP_003483306.1| PREDICTED: 5'-3' exoribonuclease 1 [Sus scrofa]
Length = 1704
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/1134 (44%), Positives = 711/1134 (62%), Gaps = 62/1134 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LK+ ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKDK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD------YDDGTEEVLNYANY 484
D+++ E K+G K+ + ++E ++ D EEV+ +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEAKNYKEKKKTKGQENSVCWAALDKNGEEVVTSKDN 415
Query: 485 EEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYY 544
E D+D F +EF Q+K YY K+ V+++ L DQA CY++AIQW LHYY
Sbjct: 416 LEDETEDDDL-----FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYY 470
Query: 545 YNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPY 604
Y+G SWSW+YP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP Y
Sbjct: 471 YHGVQSWSWFYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCY 530
Query: 605 QNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEER 664
Q+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L EER
Sbjct: 531 QHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEER 590
Query: 665 SRNRHGPMLVYTYSNVNLGT--ALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQ 722
RN+H L+ Y T + P+ FPAI H + + D V + K
Sbjct: 591 KRNQHSECLMCWYDGDTEFTYPSPWPEKFPAIERCHTRYRIISLDAWRV---DISKNKIT 647
Query: 723 DVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQVA 778
V+ K LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + S++ +A
Sbjct: 648 RVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVNAESDELSVENIA 707
Query: 779 DQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAAKDM 825
+LGK++F+N+PHL E RV ++ +++ ++ G V K+
Sbjct: 708 SSVLGKSVFVNWPHLEEARVVGISDGETKFYLEEPPGTQKLYLGRTVPPSKVVHLGDKE- 766
Query: 826 QDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT 885
Q + + I++ Y + G+ I T +VYGQ + RKY G+V ++ + + +
Sbjct: 767 QSNWTKEVQGISEYYLRRKGIIINETSAVVYGQLLTGRKYQINQNGEVRLEKQWSKQVLP 826
Query: 886 YAYQSAVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEENSFI 942
+ YQ+ V +++ KT+D++F P F L P+YG G V + V E I
Sbjct: 827 FVYQTIVKDVRAFDSRFSSIKTLDDLFPPRSMVFMLGTPYYGCTGEVQDSGDVITEGR-I 885
Query: 943 KLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE--- 999
++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 886 RVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNP 945
Query: 1000 EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKD 1059
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F ++
Sbjct: 946 HGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSYIAK 1003
Query: 1060 HSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHA 1116
+S +D++ DD++P + G ++V +I++WLK P + C ++DA +V IE
Sbjct: 1004 NSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEE 1063
Query: 1117 VDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYR 1174
V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+G R
Sbjct: 1064 VEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPIGLR 1123
Query: 1175 GTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
GTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1124 GTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|427780147|gb|JAA55525.1| Putative 5'-3' exonuclease hke1/rat1 [Rhipicephalus pulchellus]
Length = 1163
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/1123 (44%), Positives = 725/1123 (64%), Gaps = 70/1123 (6%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKK FFMA+DGVAPRAKMNQQRGRRF+SAKEA+ E++A+++GE LPTE+RFDSNCI+PG
Sbjct: 4 PKKTFFMAVDGVAPRAKMNQQRGRRFKSAKEAQAQEKEARDRGEVLPTEERFDSNCISPG 63
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL QL+ FV K++TD LW+ V V LSGH+TPGEGEHK+MD+IR
Sbjct: 64 TEFMARLQDQLQQFVATKVSTDPLWRG---------VKVYLSGHQTPGEGEHKVMDFIRT 114
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
+S+P Y+PN RHCLYGLDADLIMLG+C+HEP+F+LLREE+ + + N+ ++ PEE
Sbjct: 115 ERSQPGYDPNTRHCLYGLDADLIMLGMCSHEPHFALLREEIVYGKRQNQ--KRLNVPEEI 172
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F LLHLSL+R+YLELEF +LK+ + F F ++NIIDDWVLM FL+GNDF+P+LP+LHI
Sbjct: 173 TFHLLHLSLLREYLELEFQELKK--TIPFEFKMDNIIDDWVLMCFLVGNDFLPHLPNLHI 230
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL- 436
+ ALP+LY+ Y +V+P+L GYINE G LNL+RFEKFLT+L+ FD+E+F + AD ++L
Sbjct: 231 AHNALPVLYQAYIDVMPSLGGYINEYGKLNLERFEKFLTRLSQFDYEKFTDVQADQKFLA 290
Query: 437 ---------EGKMGKKFSDVFHKEKSKEMDPDLAALI-KATDDDYDDGTEEVLNYANYEE 486
G + + S KEK+K DPD L+ K + D D
Sbjct: 291 SKRAYAEAPNGIVQQNGSPPSGKEKTK--DPDEKRLLEKFSHLDIPD------------- 335
Query: 487 YYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYN 546
+ SDED+E EF QHK DYY KL+YA V EV+++QA Y+RAIQWNLHYYYN
Sbjct: 336 -FDSDEDQEGLLEM--EFRQHKRDYYVNKLEYADVNKEVMQEQAHGYVRAIQWNLHYYYN 392
Query: 547 GCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQN 606
G SW+WYYPHHY+PYISDIKDF +L++ +E+G+PFLPFQQL+A+LP+ASK+L+P YQ+
Sbjct: 393 GVQSWNWYYPHHYSPYISDIKDFQNLDMTFELGKPFLPFQQLMAILPSASKKLVPSAYQD 452
Query: 607 LMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSR 666
LM E SPIL+YYP++F TDLNGK+ DWEAVVLIPFI+E +L+ AM+ LT+EE+SR
Sbjct: 453 LMENEESPILDYYPKDFNTDLNGKQHDWEAVVLIPFIEEGRLLPAMEERFEKLTEEEKSR 512
Query: 667 NRHGPMLVYTYSNV------NLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGL 720
N H L++ YS G L P++ NHA L D + +K++KGL
Sbjct: 513 NGHSGHLLFVYSKEPQPPRPCKGERLV----PSLEVNHAKVTELDMDAFRLPVSKIKKGL 568
Query: 721 CQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQ 780
+ + L +Y FPTLKH+++T ++ +KVFQ +RNES++I +LK+++ +
Sbjct: 569 MEGIKLDVYFPGFPTLKHLEYTGCLKKESIKVFQALTRNESMVITISNNDERTLKEISTE 628
Query: 781 ILGKTIFINYPHLIEIRVQAVATKDSRISFDKN-------SGPVFERAAKDMQDAFQLSK 833
+LGK +++ +PHL+E V AV+++D R S + + S +F+ A+ D Q+ F +
Sbjct: 629 LLGKPVYVYWPHLLEALVVAVSSRDERHSLETHKHAKNYESVSIFKLASTD-QEVFDMQV 687
Query: 834 KSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVL 893
I + Y + GV++G ++LV+ + + RKY +G++T + + +V +A QS V
Sbjct: 688 SGIKERYLGRYGVNVGEVDILVFCKTLTGRKYTCTSKGRITLDKQWAELSVPFALQSIVK 747
Query: 894 NLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSF-IKLSFKVQQE 951
++ + E+KT++E+F G CF + +PHYG G V+ E + I + F V E
Sbjct: 748 DITEKSPDFEEFKTVEELFPVGKTCFMIGSPHYGCSGTVVDAKPENKAGRIMVKFTVPSE 807
Query: 952 PDLSDLVHLQDDTV-YNYLPSYTVASKLSISPLLLSRFTGSIFI-IDSTE-EGAKRHNIG 1008
P L ++ + + +Y+ ++ ++ +L ++ +SR TG+++I ++S E E A N+G
Sbjct: 808 PSLDGIIRNERNLCQVHYMNAHQLSQQLGVNAQFVSRITGTVYIQMNSKEAESASLVNVG 867
Query: 1009 LNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLR 1068
L++KF++ +EE+ G+++R T W Y+ + + ++K Y+ ++ + + D
Sbjct: 868 LHLKFNKTSEEIPGYSKR--TNDTWLYSTKCLQVLKEYLAKYLDFVQRMLPFLGQDKIAV 925
Query: 1069 DDVFPHQ-GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE--K 1125
+D++P G++ V ++ W+KEQ K GA ++D V+ IE V+ + E +
Sbjct: 926 EDLYPKGVGKEEVKEVAKWIKEQECTKVPRVKSGAQLLDEGVIQAIEETVNRAKSTEPPQ 985
Query: 1126 QITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGET 1185
++ L V P LY P + PD + LFDRVVN+R+ VPLGYRGTIIG++ E
Sbjct: 986 EVLLDVHPKHLYRPGLQYGWVPPDAKATYNLFDRVVNVRENIAVPLGYRGTIIGLLPLED 1045
Query: 1186 SYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
+ M +VVFD+PF G+ +RCSE GYR+ ++NL+YG R
Sbjct: 1046 NEPQMCEVVFDEPFAGGLPLRCSEHHGYRISILFLVNLTYGSR 1088
Score = 95.1 bits (235), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 52/56 (92%)
Query: 74 MIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
MI+PKK FFMA+DGVAPRAKMNQQRGRRF+SAKEA+ E++A+++GE LPTE+RFD
Sbjct: 1 MIKPKKTFFMAVDGVAPRAKMNQQRGRRFKSAKEAQAQEKEARDRGEVLPTEERFD 56
>gi|332818029|ref|XP_516791.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pan troglodytes]
Length = 1692
Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E + +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMITS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI + S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+Y Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMYWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRIDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTMVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 120/129 (93%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH+CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHHCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|410266384|gb|JAA21158.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1693
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E + +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMITS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI + S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+Y Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMYWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRIDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 120/129 (93%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH+CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHHCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|410341471|gb|JAA39682.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1693
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E + +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMITS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI + S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+Y Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMYWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRIDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 120/129 (93%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH+CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHHCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|397512470|ref|XP_003826568.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pan paniscus]
Length = 1693
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E + +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMITS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI + S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+Y Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMYWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRIDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 120/129 (93%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH+CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHHCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|410266386|gb|JAA21159.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1706
Score = 944 bits (2441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E + +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMITS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI + S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+Y Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMYWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRIDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 120/129 (93%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH+CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHHCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|426219417|ref|XP_004003922.1| PREDICTED: 5'-3' exoribonuclease 1 [Ovis aries]
Length = 1702
Score = 944 bits (2441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/1134 (44%), Positives = 710/1134 (62%), Gaps = 62/1134 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LP E RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPAEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LK+ ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKDK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD------YDDGTEEVLNYANY 484
D+++ E K+G K+ + ++E ++ D EEV+ +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEAKNYKEKKKSKGQENSICWAALDKNGEEVVTSKDN 415
Query: 485 EEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYY 544
E D+D F +EF Q+K YY K+ V+++ L DQA CY++AIQW LHYY
Sbjct: 416 LEEEMEDDDL-----FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYY 470
Query: 545 YNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPY 604
Y+G SWSW+YP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP Y
Sbjct: 471 YHGVQSWSWFYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACY 530
Query: 605 QNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEER 664
Q+LMT ++SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L EER
Sbjct: 531 QHLMTSDDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEER 590
Query: 665 SRNRHGPMLVYTY-SNVNLG-TALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQ 722
RN+H L+ + SN + P+ FP I A K + D + + K
Sbjct: 591 KRNQHSECLMCWFDSNTEFTYPSPWPEKFPPIERCCARYKIISLDAWRI---DISKNNIT 647
Query: 723 DVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQVA 778
V+ K LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + S++ +A
Sbjct: 648 KVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVNAESDELSIENIA 707
Query: 779 DQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAAKDM 825
+LGK++F+N+PHL E RV V+ +++ ++ G V K+
Sbjct: 708 SSVLGKSVFVNWPHLEEARVVGVSDGETKFYLEEPPGTQKLYLGRTAPPSKVVHLGDKE- 766
Query: 826 QDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT 885
Q + + I++ Y + G+ I T +VYGQ + RKY G+V ++ + + +
Sbjct: 767 QCNWTKEVQGISEYYLRRKGIIINETSAVVYGQLLTGRKYQINQNGEVRLEKQWSKQVLP 826
Query: 886 YAYQSAVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEENSFI 942
+ YQ+ V +++ KT+D++F P F L P+YG G V + V E I
Sbjct: 827 FVYQTIVKDIRAFDSRFSSIKTLDDLFPPRSMVFMLGTPYYGCTGEVQDSGDVITEGR-I 885
Query: 943 KLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE--- 999
++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 886 RVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNP 945
Query: 1000 EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKD 1059
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F ++
Sbjct: 946 HGDHKANVGLNLKFNKKNEEVPGYTKK--VGNEWMYSSAAEQLLAEYLERAPELFSYIAK 1003
Query: 1060 HSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHA 1116
+S +D++ DD++P + G ++V +I++WLK P + C ++DA +V IE
Sbjct: 1004 NSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEE 1063
Query: 1117 VDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYR 1174
++ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+G R
Sbjct: 1064 IEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPVGLR 1123
Query: 1175 GTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
GTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1124 GTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 229 bits (585), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 102/129 (79%), Positives = 118/129 (91%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LP E RFD
Sbjct: 121 TLPAEARFD 129
>gi|114589588|ref|XP_001161640.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pan troglodytes]
Length = 1705
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E + +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMITS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI + S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+Y Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMYWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRIDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTMVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 120/129 (93%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH+CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHHCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|397512468|ref|XP_003826567.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pan paniscus]
Length = 1705
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E + +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMITS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI + S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+Y Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMYWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRIDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 120/129 (93%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH+CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHHCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|329664920|ref|NP_001192964.1| 5'-3' exoribonuclease 1 [Bos taurus]
gi|296491012|tpg|DAA33110.1| TPA: 5'-3' exoribonuclease 1 isoform 2 [Bos taurus]
Length = 1703
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/1134 (44%), Positives = 710/1134 (62%), Gaps = 62/1134 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LP E RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEEKIKKAIEKGETLPAEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LK+ ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKDK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD------YDDGTEEVLNYANY 484
D+++ E K+G K+ + ++E ++ D EEV+ +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEAKSYKEKKKSKGQENSICWAALDKNGEEVVTSKDN 415
Query: 485 EEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYY 544
E D+D F +EF Q+K YY K+ V+++ L DQA CY++AIQW LHYY
Sbjct: 416 VEEEMEDDDL-----FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYY 470
Query: 545 YNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPY 604
Y+G SWSW+YP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP Y
Sbjct: 471 YHGVQSWSWFYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACY 530
Query: 605 QNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEER 664
Q+LMT ++SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L EER
Sbjct: 531 QHLMTSDDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEER 590
Query: 665 SRNRHGPMLVYTY-SNVNLG-TALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQ 722
RN+H L+ + SN + P+ FP + A K + D + + K
Sbjct: 591 KRNQHSECLMCWFDSNTEFTYPSPWPEKFPPVERCCARYKIISLDAWRI---DISKNNIT 647
Query: 723 DVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQVA 778
V+ K LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + S++ +A
Sbjct: 648 KVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVNAESDELSVENIA 707
Query: 779 DQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAAKDM 825
+LGK++F+N+PHL E RV V+ +++ ++ G V K+
Sbjct: 708 SSVLGKSVFVNWPHLEEARVVGVSDGETKFYLEEPPGTQKLYLGRTAPPSKVVHLGDKE- 766
Query: 826 QDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT 885
Q + + I++ Y + G+ I T +VYGQ + RKY G+V ++ + + +
Sbjct: 767 QCNWTKEVQGISEYYLRRKGIIINETSAVVYGQLLTGRKYQINQNGEVRLEKQWSKQVLP 826
Query: 886 YAYQSAVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEENSFI 942
+ YQ+ V +++ KT+D++F P F L P+YG G V + V E I
Sbjct: 827 FVYQTIVKDIRAFDSRFSSIKTLDDLFPPRSMVFMLGTPYYGCTGEVQDSGDVITEGR-I 885
Query: 943 KLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE--- 999
++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 886 RVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNP 945
Query: 1000 EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKD 1059
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F ++
Sbjct: 946 HGDHKANVGLNLKFNKKNEEVPGYTKK--VGNEWMYSSAAEQLLAEYLERAPELFSYIAK 1003
Query: 1060 HSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHA 1116
+S +D++ DD++P + G ++V +I++WLK P + C ++DA +V IE
Sbjct: 1004 NSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEE 1063
Query: 1117 VDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYR 1174
++ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+G R
Sbjct: 1064 IEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPVGLR 1123
Query: 1175 GTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
GTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1124 GTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 229 bits (585), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 102/129 (79%), Positives = 118/129 (91%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEEKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LP E RFD
Sbjct: 121 TLPAEARFD 129
>gi|332232376|ref|XP_003265382.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Nomascus leucogenys]
Length = 1693
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMVTS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D + NK +
Sbjct: 587 REERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRIDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRIDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFNY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGIIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLSYG R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSYGSR 1177
Score = 231 bits (588), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|296491011|tpg|DAA33109.1| TPA: 5'-3' exoribonuclease 1 isoform 1 [Bos taurus]
Length = 1690
Score = 943 bits (2437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/1134 (44%), Positives = 710/1134 (62%), Gaps = 62/1134 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LP E RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEEKIKKAIEKGETLPAEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LK+ ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKDK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD------YDDGTEEVLNYANY 484
D+++ E K+G K+ + ++E ++ D EEV+ +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEAKSYKEKKKSKGQENSICWAALDKNGEEVVTSKDN 415
Query: 485 EEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYY 544
E D+D F +EF Q+K YY K+ V+++ L DQA CY++AIQW LHYY
Sbjct: 416 VEEEMEDDDL-----FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYY 470
Query: 545 YNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPY 604
Y+G SWSW+YP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP Y
Sbjct: 471 YHGVQSWSWFYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACY 530
Query: 605 QNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEER 664
Q+LMT ++SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L EER
Sbjct: 531 QHLMTSDDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEER 590
Query: 665 SRNRHGPMLVYTY-SNVNLG-TALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQ 722
RN+H L+ + SN + P+ FP + A K + D + + K
Sbjct: 591 KRNQHSECLMCWFDSNTEFTYPSPWPEKFPPVERCCARYKIISLDAWRI---DISKNNIT 647
Query: 723 DVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQVA 778
V+ K LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + S++ +A
Sbjct: 648 KVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVNAESDELSVENIA 707
Query: 779 DQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAAKDM 825
+LGK++F+N+PHL E RV V+ +++ ++ G V K+
Sbjct: 708 SSVLGKSVFVNWPHLEEARVVGVSDGETKFYLEEPPGTQKLYLGRTAPPSKVVHLGDKE- 766
Query: 826 QDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT 885
Q + + I++ Y + G+ I T +VYGQ + RKY G+V ++ + + +
Sbjct: 767 QCNWTKEVQGISEYYLRRKGIIINETSAVVYGQLLTGRKYQINQNGEVRLEKQWSKQVLP 826
Query: 886 YAYQSAVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEENSFI 942
+ YQ+ V +++ KT+D++F P F L P+YG G V + V E I
Sbjct: 827 FVYQTIVKDIRAFDSRFSSIKTLDDLFPPRSMVFMLGTPYYGCTGEVQDSGDVITEGR-I 885
Query: 943 KLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE--- 999
++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 886 RVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNP 945
Query: 1000 EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKD 1059
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F ++
Sbjct: 946 HGDHKANVGLNLKFNKKNEEVPGYTKK--VGNEWMYSSAAEQLLAEYLERAPELFSYIAK 1003
Query: 1060 HSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHA 1116
+S +D++ DD++P + G ++V +I++WLK P + C ++DA +V IE
Sbjct: 1004 NSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEE 1063
Query: 1117 VDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYR 1174
++ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+G R
Sbjct: 1064 IEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPVGLR 1123
Query: 1175 GTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
GTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1124 GTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 229 bits (585), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 102/129 (79%), Positives = 118/129 (91%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEEKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LP E RFD
Sbjct: 121 TLPAEARFD 129
>gi|2281015|dbj|BAA21563.1| Dhm2 protein [Mus musculus]
Length = 1687
Score = 943 bits (2437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/1149 (44%), Positives = 714/1149 (62%), Gaps = 69/1149 (6%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQR RRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRARRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKEK--ITFKYDIEKIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFE++L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFH----------KEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + KEK K + + A D +G V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGAAAEEAKNCKEKRKPKGQENSLSWAALDKSEGEG---VAS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N+E+ ED++ F +EF Q+K YY K+ V++E L +QA CY++AIQW
Sbjct: 413 RDNFED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDEFLANQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI+ S L + +E+G+PF PF+QLLAVLP+ASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVNLGTALA--PDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y T + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFTYSSPWPEKFPAIERCCTRYKMISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII---VQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++++ V + ++
Sbjct: 646 -ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENLMLEISVNAEPDELRIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP--VFERAAKDMQDAFQLSK 833
+A +LGK +F+N+PHL E RV AV+ +++ ++ G V+ QL+
Sbjct: 705 NIASAVLGKAVFVNWPHLEEARVVAVSDGETKFYIEEPPGTQKVYLGKTAPPSKVIQLTD 764
Query: 834 K----------SITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRST 883
K I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KEQSNWTKEIQGISEQYLRRKGIIINETSAVVYAQLLTGRKYQISQNGEVRLEKQWSKQI 824
Query: 884 VTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST---VKEEN 939
+ + YQ+ V +++ KT+D++F P F L P+YG G V + + E
Sbjct: 825 LPFVYQTIVKDIRAFDSRFSNIKTLDDLFPPRTMVFMLGTPYYGCTGEVQDSGDLITEGR 884
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +A +L +S L+SRFTGSIFI +
Sbjct: 885 --IRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLAGRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGNEWMYSSAAEQLLAEYIERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLHILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKSNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRESFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGERLCG 1231
G RGT+IGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R C
Sbjct: 1121 GLRGTVIGIKGASREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR-CE 1179
Query: 1232 NSNPHVKNI 1240
N + I
Sbjct: 1180 TGNQKLTAI 1188
Score = 229 bits (583), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/129 (79%), Positives = 118/129 (91%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQR RRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRARRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|383419335|gb|AFH32881.1| 5'-3' exoribonuclease 1 isoform b [Macaca mulatta]
Length = 1694
Score = 943 bits (2437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMVTS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDIVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFVYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|332232374|ref|XP_003265381.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Nomascus leucogenys]
Length = 1706
Score = 943 bits (2437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMVTS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D + NK +
Sbjct: 587 REERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRIDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRIDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFNY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGIIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLSYG R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSYGSR 1177
Score = 231 bits (588), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|402861336|ref|XP_003895053.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Papio anubis]
Length = 1694
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMVTS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDIVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFVYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|297286724|ref|XP_001112265.2| PREDICTED: 5'-3' exoribonuclease 1-like isoform 1 [Macaca mulatta]
Length = 1693
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMVTS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDIVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFVYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|440911813|gb|ELR61446.1| 5'-3' exoribonuclease 1 [Bos grunniens mutus]
Length = 1727
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/1134 (44%), Positives = 710/1134 (62%), Gaps = 62/1134 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LP E RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEEKIKKAIEKGETLPAEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LK+ ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKDK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD------YDDGTEEVLNYANY 484
D+++ E K+G K+ + ++E ++ D EEV+ +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEAKSYKEKKKSKGQENSICWAALDKNGEEVVTSKDN 415
Query: 485 EEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYY 544
E D+D F +EF Q+K YY K+ V+++ L DQA CY++AIQW LHYY
Sbjct: 416 VEEEMEDDDL-----FETEFRQYKRTYYMTKMGVDIVSDDFLADQAACYVQAIQWILHYY 470
Query: 545 YNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPY 604
Y+G SWSW+YP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP Y
Sbjct: 471 YHGVQSWSWFYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACY 530
Query: 605 QNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEER 664
Q+LMT ++SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L EER
Sbjct: 531 QHLMTSDDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEER 590
Query: 665 SRNRHGPMLVYTYSNVNLGT--ALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQ 722
RN+H L+ + + T + P+ FP + A K + D + + K
Sbjct: 591 KRNQHSECLMCWFDSDTEFTYPSPWPEKFPPVERCCARYKIISLDAWRI---DISKNNIT 647
Query: 723 DVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQVA 778
V+ K LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + S++ +A
Sbjct: 648 KVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVNAESDELSVENIA 707
Query: 779 DQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAAKDM 825
+LGK++F+N+PHL E RV V+ +++ ++ G V K+
Sbjct: 708 SSVLGKSVFVNWPHLEEARVVGVSDGETKFYLEEPPGTQKLYLGRTAPPSKVVHLGDKE- 766
Query: 826 QDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT 885
Q + + I++ Y + G+ I T +VYGQ + RKY G+V ++ + + +
Sbjct: 767 QCNWTKEVQGISEYYLRRKGIIINETSAVVYGQLLTGRKYQINQNGEVRLEKQWSKQALP 826
Query: 886 YAYQSAVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEENSFI 942
+ YQ+ V +++ KT+D++F P F L P+YG G V + V E I
Sbjct: 827 FVYQTIVKDIRAFDSRFSSIKTLDDLFPPRSMVFMLGTPYYGCTGEVQDSGDVITEGR-I 885
Query: 943 KLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE--- 999
++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 886 RVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNP 945
Query: 1000 EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKD 1059
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F ++
Sbjct: 946 HGDHKANVGLNLKFNKKNEEVPGYTKK--IGNEWMYSSAAEQLLAEYLERAPELFSYIAK 1003
Query: 1060 HSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHA 1116
+S +D++ DD++P + G ++V +I++WLK P + C ++DA +V IE
Sbjct: 1004 NSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEE 1063
Query: 1117 VDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYR 1174
++ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+G R
Sbjct: 1064 IEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPVGLR 1123
Query: 1175 GTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
GTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1124 GTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 229 bits (585), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 102/129 (79%), Positives = 118/129 (91%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEEKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LP E RFD
Sbjct: 121 TLPAEARFD 129
>gi|297672153|ref|XP_002814174.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pongo abelii]
Length = 1706
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSLLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMVTS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---EAEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTNEDSPIIEYYPLDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRIDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAIVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|402861338|ref|XP_003895054.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Papio anubis]
Length = 1706
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMVTS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDIVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFVYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|297672155|ref|XP_002814175.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pongo abelii]
Length = 1693
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSLLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMVTS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---EAEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTNEDSPIIEYYPLDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRIDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAIVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (589), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|383419337|gb|AFH32882.1| 5'-3' exoribonuclease 1 isoform a [Macaca mulatta]
Length = 1707
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMVTS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDIVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFVYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|109048976|ref|XP_001112305.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 2 [Macaca mulatta]
gi|355747003|gb|EHH51617.1| hypothetical protein EGM_11029 [Macaca fascicularis]
Length = 1706
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMVTS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDIVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFVYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|50949885|emb|CAH10490.1| hypothetical protein [Homo sapiens]
gi|119599378|gb|EAW78972.1| 5'-3' exoribonuclease 1, isoform CRA_b [Homo sapiens]
Length = 1694
Score = 942 bits (2434), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/1137 (44%), Positives = 714/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E + +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKN--EG-EMITS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI + S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRIDQKALYFCGFPTLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|110624787|ref|NP_001036069.1| 5'-3' exoribonuclease 1 isoform b [Homo sapiens]
Length = 1693
Score = 942 bits (2434), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/1137 (44%), Positives = 714/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E + +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKN--EG-EMITS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI + S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRIDQKALYFCGFPTLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|403304036|ref|XP_003942619.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1694
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/1138 (44%), Positives = 715/1138 (62%), Gaps = 70/1138 (6%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE + F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--IPFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMVTS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNVED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V + K
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRV---DISK 643
Query: 719 GLCQDVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSL 774
V+ K LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +
Sbjct: 644 NKITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDTESDELII 703
Query: 775 KQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERA 821
+ VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 704 ENVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYLGRSAPPSKVIHLG 763
Query: 822 AKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIR 881
K+ Q + + I++ Y + G+ I T +VYGQ + RKY G+V ++ + +
Sbjct: 764 DKE-QSNWAKEIQGISEHYLRRKGIIINETSAVVYGQLLTGRKYQINQNGEVRLEKQWSK 822
Query: 882 STVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEE 938
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 823 QVVPFVYQTVVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITE 882
Query: 939 NSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDST 998
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 883 GR-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGS 941
Query: 999 E---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFG 1055
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F
Sbjct: 942 RRNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFS 999
Query: 1056 FLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSL 1112
++ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V
Sbjct: 1000 YIAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEK 1059
Query: 1113 IEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVP 1170
IE V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP
Sbjct: 1060 IEEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVP 1119
Query: 1171 LGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
+G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++N+S+G R
Sbjct: 1120 VGLRGTIIGIKGAIREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNISHGSR 1177
Score = 231 bits (588), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|403304034|ref|XP_003942618.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1706
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/1138 (44%), Positives = 715/1138 (62%), Gaps = 70/1138 (6%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE + F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--IPFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMVTS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNVED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V + K
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRV---DISK 643
Query: 719 GLCQDVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSL 774
V+ K LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +
Sbjct: 644 NKITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDTESDELII 703
Query: 775 KQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERA 821
+ VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 704 ENVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYLGRSAPPSKVIHLG 763
Query: 822 AKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIR 881
K+ Q + + I++ Y + G+ I T +VYGQ + RKY G+V ++ + +
Sbjct: 764 DKE-QSNWAKEIQGISEHYLRRKGIIINETSAVVYGQLLTGRKYQINQNGEVRLEKQWSK 822
Query: 882 STVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEE 938
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 823 QVVPFVYQTVVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITE 882
Query: 939 NSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDST 998
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 883 GR-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGS 941
Query: 999 E---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFG 1055
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F
Sbjct: 942 RRNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFS 999
Query: 1056 FLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSL 1112
++ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V
Sbjct: 1000 YIAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEK 1059
Query: 1113 IEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVP 1170
IE V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP
Sbjct: 1060 IEEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVP 1119
Query: 1171 LGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
+G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++N+S+G R
Sbjct: 1120 VGLRGTIIGIKGAIREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNISHGSR 1177
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|410924239|ref|XP_003975589.1| PREDICTED: 5'-3' exoribonuclease 1-like [Takifugu rubripes]
Length = 1673
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/1128 (45%), Positives = 709/1128 (62%), Gaps = 58/1128 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA +KGE LPTE RFD
Sbjct: 70 VLFRIIKPCKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEEKIKKALDKGEVLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RL +QL YFV K++TDKLW++ V V LSGHETPGEGEHK
Sbjct: 130 SNCITPGTDFMARLQEQLEYFVHNKVSTDKLWQN---------VRVYLSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR KPD++PN RHCLYGLDADLIMLGL +HEP FSLLREEV+F K K +
Sbjct: 181 IMEFIRSENIKPDHDPNTRHCLYGLDADLIMLGLTSHEPNFSLLREEVRFGGK--KSQKR 238
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
I PEET F LLHLSLMR+Y++ EF L+ L + E IIDDW+LMGFL+GNDFIP
Sbjct: 239 ITAPEETTFHLLHLSLMREYIDYEFSVLRNH--LGSNYDFERIIDDWILMGFLVGNDFIP 296
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLYK Y VLP+L GY+NE G LNLK FEK++ KL+ FD E F E +
Sbjct: 297 HLPHLHISHDALPLLYKTYISVLPSLGGYLNENGNLNLKNFEKYMEKLSEFDREHFSEVF 356
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYS 490
D+++ E K+G K+ + ++ + + A I+AT + T + E
Sbjct: 357 VDLKWFESKVGNKYLN-----EAAGLAAEKEAAIQATV--MEVCTSDSTRCLTASEKPAG 409
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
D++EE F +EF Q+K YY K+ V+++ L QA+CY+ IQW LHYYY+G S
Sbjct: 410 DDEEEDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLAMQAKCYVEGIQWILHYYYHGVQS 469
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
WSWYYP+HYAP++SDIK+ + L L +++G+PF+PFQQLLAVLPAAS ELLPE Y++LM
Sbjct: 470 WSWYYPYHYAPFLSDIKNVAELKLTFDLGKPFMPFQQLLAVLPAASMELLPEAYRHLMNS 529
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
ENSPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE L+ AM+ H LT +ERSRN H
Sbjct: 530 ENSPIIEYYPHDFKTDLNGKQQEWEAVVLIPFIDERCLLAAMEPWNHQLTKQERSRNCHT 589
Query: 671 PMLVYTY---SNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLK 727
VY+Y ++ + L P FP I H ++ + D V N +R+ + +
Sbjct: 590 ECAVYSYDPEADFKYSSTL-PQLFPDIIRCHVKKEHIPMDAWQVPMNHVRRAIDRSA--- 645
Query: 728 LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESII--IVQDKVQVPSLKQVADQILGKT 785
LY FPTL+H++ + V VFQQ SR E+ I I+ + V Q+LG +
Sbjct: 646 LYFCGFPTLQHIKHKFYRKKIGVVVFQQSSRGENTILDILPSNEEETVCDDVTAQVLGTS 705
Query: 786 IFINYPHLIEIRVQAVATKDSRISFDKNSG--PVFERAA------------KDMQDAFQL 831
+F+N+PHL E R+ AV+ + R D+ G ++ RA+ K+ +D +
Sbjct: 706 VFVNWPHLEEARIVAVSDGEVRFCLDEPPGLQRMYNRASTPPPTKVTCLSDKEQKDWVK- 764
Query: 832 SKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSA 891
+ IT+ + + G+ + T VL+YGQ + RKY G V ++ + + + +AYQ+
Sbjct: 765 DVQGITEHFLKRKGIVVNETAVLLYGQLLTGRKYVPKANGIVEIEKQWAKQVLPFAYQTV 824
Query: 892 VLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCV--ISTVKEENSFIKLSFKV 948
V +++ SL YK++DE+F P F + NP+YG+ G V S V +E +++ F +
Sbjct: 825 VKDIKAIYSSLPCYKSLDELFPPTTTVFMVGNPYYGAMGEVQDSSDVIKEGR-VRVVFSI 883
Query: 949 QQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEE---GAKRH 1005
QEP L L+ Q Y P Y +AS+L IS L+SRF+G I I +++ G R
Sbjct: 884 PQEPQLEMLIQNQHKYCVRYSPGYVLASRLGISSNLVSRFSGCILIGRGSKKNPCGEHRT 943
Query: 1006 NIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDI 1065
NIGLN+KF++KNEEV G+T+R E K+W Y+ V L+ Y+ +F EVF + ++ DDI
Sbjct: 944 NIGLNLKFNKKNEEVPGYTKRTE--KEWLYSAAVEELLAEYLDRFSEVFHSVSKNTHDDI 1001
Query: 1066 YLRDDVFP---HQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEK 1122
+ DD++P G ++VA+I SWLK P + C V+DA +V I AV+ +
Sbjct: 1002 FYEDDIWPELDQNGAEKVAEITSWLKSHPVSSVTRTSCELQVLDAAIVERIGEAVEKAKV 1061
Query: 1123 VEKQIT--LFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI 1180
+ + VKP+ L+ P + PD D +++LFDRVVN+R+ +TVPLG +GTIIGI
Sbjct: 1062 KKSSKKVRVTVKPHLLFRPLEQQQGVVPDLDAEYRLFDRVVNVRESFTVPLGLKGTIIGI 1121
Query: 1181 VQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
E + +Y+V+FD+ F G+ IR + RGYR+P A+IN+S+G R
Sbjct: 1122 KGAEREAEVLYEVLFDEEFAGGLNIRSASCRGYRLPPCALINISHGSR 1169
Score = 229 bits (585), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 102/129 (79%), Positives = 118/129 (91%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSE+V+E+QIPEFDNLYLDMNGIIH CSHPND D HFRI+E++I
Sbjct: 1 MGVPKFYRWISERYPCLSEIVKEHQIPEFDNLYLDMNGIIHQCSHPNDEDVHFRISEEKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA +KGE
Sbjct: 61 FADIFHYVEVLFRIIKPCKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEEKIKKALDKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 VLPTEARFD 129
>gi|380813906|gb|AFE78827.1| 5'-3' exoribonuclease 1 isoform b [Macaca mulatta]
Length = 1694
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV++ K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRYGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMVTS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDIVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFVYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|51476722|emb|CAH18332.1| hypothetical protein [Homo sapiens]
Length = 1694
Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/1137 (44%), Positives = 713/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIEKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLEYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E + +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKN--EG-EMITS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI + S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRIDQKALYFCGFPTLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVRDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIEKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|110624792|ref|NP_061874.3| 5'-3' exoribonuclease 1 isoform a [Homo sapiens]
gi|74714582|sp|Q8IZH2.1|XRN1_HUMAN RecName: Full=5'-3' exoribonuclease 1; AltName: Full=Strand-exchange
protein 1 homolog
gi|24474444|gb|AAN11306.1| DNA strand-exchange protein SEP1 [Homo sapiens]
gi|119599377|gb|EAW78971.1| 5'-3' exoribonuclease 1, isoform CRA_a [Homo sapiens]
gi|146327192|gb|AAI41556.1| 5'-3' exoribonuclease 1 [synthetic construct]
gi|261857762|dbj|BAI45403.1| 5'-3' exoribonuclease 1 [synthetic construct]
Length = 1706
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/1137 (44%), Positives = 714/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E + +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKN--EG-EMITS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI + S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRIDQKALYFCGFPTLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|380813908|gb|AFE78828.1| 5'-3' exoribonuclease 1 isoform a [Macaca mulatta]
Length = 1707
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/1137 (44%), Positives = 715/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV++ K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRYGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMVTS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDIVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFVYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|34365218|emb|CAE45950.1| hypothetical protein [Homo sapiens]
Length = 1706
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/1137 (44%), Positives = 714/1137 (62%), Gaps = 68/1137 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E + +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKN--EG-EMITS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI + S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 646 -ITRIDQKALYFCGFPTLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PH+ E RV AV+ +++ ++ G V
Sbjct: 705 NVASSVLGKSVFVNWPHIEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 824 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1121 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1177
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/129 (79%), Positives = 118/129 (91%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPN +D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNGDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|296227918|ref|XP_002759572.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Callithrix jacchus]
Length = 1694
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/1142 (44%), Positives = 713/1142 (62%), Gaps = 78/1142 (6%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+ DK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISMDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKK---AQR 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFH--------------KEKSKEMDPDLAALIKATDDDYDDGTE 476
D+++ E K+G K+ + K K +E AAL D ++G E
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKENKKLKGQENSLCWAAL------DKNEG-E 408
Query: 477 EVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRA 536
V + N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++A
Sbjct: 409 MVTSKDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQATCYVQA 462
Query: 537 IQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAAS 596
IQW LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAAS
Sbjct: 463 IQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAAS 522
Query: 597 KELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVE 656
K LLP YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+
Sbjct: 523 KNLLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCN 582
Query: 657 HLLTDEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPN 714
H L EER RN+H L+ Y + + P+ FPAI K + D V
Sbjct: 583 HSLKKEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRV--- 639
Query: 715 KLRKGLCQDVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQ 770
+ K V+ K LY FPTLKH++ ++ + V+VFQQ SR E++ I+V +
Sbjct: 640 DISKNKITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDTESD 699
Query: 771 VPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------V 817
++ VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 700 ELIIENVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKV 759
Query: 818 FERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQR 877
K+ Q + + I++ Y + G+ I T +VYGQ + RKY G+V ++
Sbjct: 760 IHLGDKE-QSNWAKEIQGISEHYLRRKGIIINETSAVVYGQLLTGRKYQINQNGEVRLEK 818
Query: 878 TFIRSTVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST-- 934
+ + V + YQ+ V +++ KT+D++F F L P+YG G V +
Sbjct: 819 QWSKQVVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGD 878
Query: 935 VKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFI 994
V E I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI
Sbjct: 879 VITEGR-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFI 937
Query: 995 IDSTE---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFP 1051
+ G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ P
Sbjct: 938 GRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAP 995
Query: 1052 EVFGFLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAK 1108
E+F ++ +S +D++ DD++P + G ++V +I++WLK P + C ++DA
Sbjct: 996 ELFSYIAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAA 1055
Query: 1109 VVSLIEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDC 1166
+V IE V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+
Sbjct: 1056 IVEKIEEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVREN 1115
Query: 1167 YTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYG 1226
++VP+G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++N+S+G
Sbjct: 1116 FSVPVGLRGTIIGIKGAIREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNISHG 1175
Query: 1227 ER 1228
R
Sbjct: 1176 SR 1177
Score = 231 bits (588), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|119599379|gb|EAW78973.1| 5'-3' exoribonuclease 1, isoform CRA_c [Homo sapiens]
Length = 1693
Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/1137 (44%), Positives = 714/1137 (62%), Gaps = 69/1137 (6%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E + +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKN--EG-EMITS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI + S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDE-RLLEAMETCNHSLK 585
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V NK +
Sbjct: 586 KEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 644
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++
Sbjct: 645 -ITRIDQKALYFCGFPTLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVE 703
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 704 NVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGD 763
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 764 KE-QSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQ 822
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
V + YQ+ V +++ KT+D++F F L P+YG G V + V E
Sbjct: 823 VVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 882
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 883 R-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSR 941
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 942 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSY 999
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1000 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI 1059
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+
Sbjct: 1060 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPV 1119
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1120 GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1176
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|296227920|ref|XP_002759573.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Callithrix jacchus]
Length = 1706
Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/1142 (44%), Positives = 713/1142 (62%), Gaps = 78/1142 (6%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+ DK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISMDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKK---AQR 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFH--------------KEKSKEMDPDLAALIKATDDDYDDGTE 476
D+++ E K+G K+ + K K +E AAL D ++G E
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKENKKLKGQENSLCWAAL------DKNEG-E 408
Query: 477 EVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRA 536
V + N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++A
Sbjct: 409 MVTSKDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQATCYVQA 462
Query: 537 IQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAAS 596
IQW LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAAS
Sbjct: 463 IQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAAS 522
Query: 597 KELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVE 656
K LLP YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+
Sbjct: 523 KNLLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCN 582
Query: 657 HLLTDEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPN 714
H L EER RN+H L+ Y + + P+ FPAI K + D V
Sbjct: 583 HSLKKEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRV--- 639
Query: 715 KLRKGLCQDVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQ 770
+ K V+ K LY FPTLKH++ ++ + V+VFQQ SR E++ I+V +
Sbjct: 640 DISKNKITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVDTESD 699
Query: 771 VPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------V 817
++ VA +LGK++F+N+PHL E RV AV+ +++ ++ G V
Sbjct: 700 ELIIENVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKV 759
Query: 818 FERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQR 877
K+ Q + + I++ Y + G+ I T +VYGQ + RKY G+V ++
Sbjct: 760 IHLGDKE-QSNWAKEIQGISEHYLRRKGIIINETSAVVYGQLLTGRKYQINQNGEVRLEK 818
Query: 878 TFIRSTVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST-- 934
+ + V + YQ+ V +++ KT+D++F F L P+YG G V +
Sbjct: 819 QWSKQVVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGD 878
Query: 935 VKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFI 994
V E I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI
Sbjct: 879 VITEGR-IRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFI 937
Query: 995 IDSTE---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFP 1051
+ G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ P
Sbjct: 938 GRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAP 995
Query: 1052 EVFGFLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAK 1108
E+F ++ +S +D++ DD++P + G ++V +I++WLK P + C ++DA
Sbjct: 996 ELFSYIAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAA 1055
Query: 1109 VVSLIEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDC 1166
+V IE V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+
Sbjct: 1056 IVEKIEEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVREN 1115
Query: 1167 YTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYG 1226
++VP+G RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++N+S+G
Sbjct: 1116 FSVPVGLRGTIIGIKGAIREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNISHG 1175
Query: 1227 ER 1228
R
Sbjct: 1176 SR 1177
Score = 231 bits (589), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|354466144|ref|XP_003495535.1| PREDICTED: 5'-3' exoribonuclease 1 [Cricetulus griseus]
gi|344244388|gb|EGW00492.1| 5'-3' exoribonuclease 1 [Cricetulus griseus]
Length = 1726
Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/1415 (39%), Positives = 801/1415 (56%), Gaps = 137/1415 (9%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKEK--ITFKYDIEKIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFE++L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFH----------KEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + KEK K + + A D +G V +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEAKNFKEKRKSKGQENSLSWAALDKSEGEG---VAS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N+E+ ED++ F +EF Q+K YY K+ V++E L DQA CY++AIQW
Sbjct: 413 KDNFED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDEFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLP+ASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPSASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVNLGTALAP--DYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y T +P + FPAI K + D V NK R
Sbjct: 587 KEERKRNQHSECLMCWYDKDTEFTYSSPWPEKFPAIERCCTRYKIISLDAWRVDINKNR- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII---VQDKVQVPSLK 775
+ + LY FPTLKH++ ++ + V+VFQQ SR E++++ V + S++
Sbjct: 646 -ITKVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEISVNTEPDELSIE 704
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAA 822
+A +LGK++F+N+PHL E RV AV+ +++ ++ G V + A
Sbjct: 705 NIASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKVYLGKTAPPSKVIQLAD 764
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K+ Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + +
Sbjct: 765 KE-QSNWTKEIQGISEQYLRRKGIIINETSAVVYAQLLTGRKYQVNQNGEVHLEKQWSKQ 823
Query: 883 TVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEEN 939
+ + YQ+ V +++ KT+ ++F F L P+YG G V + V E
Sbjct: 824 ILPFVYQTIVKDIRAFDSRFSSIKTLGDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEG 883
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
I++ F + EP+L L+ Q Y P Y +A +L +S L+SRFTGSIFI +
Sbjct: 884 R-IRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLAGRLGVSGYLVSRFTGSIFIGRGSR 942
Query: 1000 ---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F +
Sbjct: 943 RNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYIERAPELFSY 1000
Query: 1057 LKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
+ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V I
Sbjct: 1001 IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLHILDAAIVEKI 1060
Query: 1114 EHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPL 1171
E V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+
Sbjct: 1061 EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPV 1120
Query: 1172 GYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGERLCG 1231
G RGT+IGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G
Sbjct: 1121 GLRGTVIGIKGASREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHG----- 1175
Query: 1232 NSNPHVKNINVMQSRGERNTNYAQVTRQPQRTTFYKEN---------APLVNSNLQVTSP 1282
SR E +PQ Y + L +S + P
Sbjct: 1176 -------------SRSETGNQKLTAIVKPQPAMNYSSSNSSVSSGHLGGLNHSPQSLFVP 1222
Query: 1283 YHVKVSR----CN---SQQSSVSQSPSSTMISQQSSPFNVKPTEKTEPPPPHKLNQVNTS 1335
V CN S Q S P + ++ + V P E ++ PHK + N +
Sbjct: 1223 TQVPTKGDDEFCNIWQSLQGSGKIQPHQPTVQEKVA---VLPQEISQVTQPHK-SGFNDN 1278
Query: 1336 SAP----KEKPRTSEQNQIKSNGNEQKV--IINKEERCIFSNATYSIPTTQNSELFSTGG 1389
S K P + + KS E + + NK+ + + S S
Sbjct: 1279 SVKIQQRKHDPHRKFKEEYKSPKAECQTQKLPNKQTSGGSAKCNIKLLKRNESPGASEAQ 1338
Query: 1390 MSFFGYPNLLDIPENKNKLLTGEITANK---------METKPEKATCPQD---------K 1431
GYPN +D P + + +T +K E E+ PQ K
Sbjct: 1339 KVVTGYPNAIDKPHSGIENFLASLTISKESEVQSPHHGEPPDEEHLSPQSFAMKGTRMLK 1398
Query: 1432 EVEEITNGTQTITMNDLYQ-------SANKRSENG 1459
E+ +I + T + ND Q S N+R E+G
Sbjct: 1399 EILKIDSPDTTDSKNDGKQFDSEVTASPNRRDEHG 1433
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|431899770|gb|ELK07717.1| 5'-3' exoribonuclease 1 [Pteropus alecto]
Length = 1742
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/1136 (44%), Positives = 707/1136 (62%), Gaps = 67/1136 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV LKI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNLKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAQFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LK+ ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKDK--ITFQYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD------YDDGTEEVLNYANY 484
D+++ E K+G K+ + ++E ++ D + V + N
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEAKNYKEKKKSKVQENSICWAALDKNAQVVTSKDNL 415
Query: 485 EEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYY 544
E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW LHYY
Sbjct: 416 ED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYY 469
Query: 545 YNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPY 604
Y+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP Y
Sbjct: 470 YHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCY 529
Query: 605 QNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEER 664
Q+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L EER
Sbjct: 530 QHLMTREDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKTEER 589
Query: 665 SRNRHGPMLVYTYSNVNLGTALA-----PDYFPAINENHAVEKPLYRDDIYVHPNKLRKG 719
RN+H L+ Y + GT P+ FPAI K + D V + K
Sbjct: 590 KRNQHSECLMCWY---DRGTEFTYPSPWPEKFPAIARCCTRYKIISLDAWRV---DISKN 643
Query: 720 LCQDVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLK 775
V+ K Y FPTLKH++ ++ + V+VFQQ SR E++ I+V + S++
Sbjct: 644 KITRVDQKAFYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVGAESAELSIE 703
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP---VFERAAKDMQDAFQLS 832
VA +LGK++F+N+PHL E RV ++ +++ ++ G R A +
Sbjct: 704 NVASSVLGKSVFVNWPHLEEARVVGISDGETKFYLEEPPGTQKLYLGRTAPPCKVVLLGD 763
Query: 833 K---------KSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRST 883
K + I++ Y + G+ I T +VY Q + KY G+V ++ + +
Sbjct: 764 KEQSNWIKEVQGISEYYLRRKGIIINETSAVVYAQLLTGHKYQINQNGEVRLEKQWSKQV 823
Query: 884 VTYAYQSAVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEENS 940
+ + YQ+ V +++ KT+D++F P F L P+YG G V + V E
Sbjct: 824 LPFVYQTIVKDIRAFDSRFSSIKTLDDLFPPRSMVFMLGTPYYGCTGEVQDSGDVITEGR 883
Query: 941 FIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE- 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 884 -IRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRR 942
Query: 1000 --EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFL 1057
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F ++
Sbjct: 943 NPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGNEWMYSSAAEQLLAEYLERAPELFCYI 1000
Query: 1058 KDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIE 1114
+S +D++ DD++P + G ++V +I++WL+ P + C ++DA +V IE
Sbjct: 1001 AKNSQEDVFYEDDIWPGENENGAEKVQEIITWLRGHPVSTLSRSSCDLQILDAAIVEKIE 1060
Query: 1115 HAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLG 1172
V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+G
Sbjct: 1061 EEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPVG 1120
Query: 1173 YRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NL++G R
Sbjct: 1121 LRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLTHGSR 1176
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|344288974|ref|XP_003416221.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Loxodonta africana]
Length = 1706
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/1138 (44%), Positives = 708/1138 (62%), Gaps = 70/1138 (6%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LK+ ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKDK--IAFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVHILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYA---NYEEY 487
D+++ E K+G K+ + + + G E V A N +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAA-------EEAKNYKEKKKSKGQENVCWAALDKNESDT 408
Query: 488 YYSDEDEEWRTN----FFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHY 543
S ++ E T F +EF Q+K YY K+ V+++ L DQA CY++AIQW LHY
Sbjct: 409 ATSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHY 468
Query: 544 YYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEP 603
YY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP
Sbjct: 469 YYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTC 528
Query: 604 YQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEE 663
YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM++ H L EE
Sbjct: 529 YQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMESCNHSLKKEE 588
Query: 664 RSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLC 721
R RN+H L+ Y + + P+ FP I K + D V + K
Sbjct: 589 RKRNQHSECLMCWYDRDTEFIYPSPWPEKFPPIQRCCTRYKIISLDAWRV---DISKNKI 645
Query: 722 QDVNLK-LYVTHFPTLKHVQFTHKI---ENAKVKVFQQPSRNESI---IIVQDKVQVPSL 774
V+ K LY FPTLKH++ HK+ + + V+VFQQ SR E++ I+ S+
Sbjct: 646 TRVDQKALYFCRFPTLKHIK--HKVIFLKKSGVQVFQQSSRGENMMLEILSNADSDELSI 703
Query: 775 KQVADQILGKTIFINYPHLIEIRVQAVATKDS-----------RISFDKNSGP--VFERA 821
+ VA +LGK++F+N+PHL E RV AV+ ++ R+ + S P V
Sbjct: 704 ENVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYVEEPPGTQRLYLGRTSPPSKVIHLG 763
Query: 822 AKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIR 881
K+ Q + + I++ Y + G+ I T ++Y Q + RKY G+V ++ + +
Sbjct: 764 DKE-QSNWTKEVQGISEHYLRRKGIIINETSAVIYAQLLTGRKYQINQNGEVQLEKQWSK 822
Query: 882 STVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEE 938
+ + YQ+ V +++ KT+D++F P F L P+YG G V + V E
Sbjct: 823 QVLPFVYQTIVKDIRAFDSRFSNIKTLDDLFPPRSVVFMLGTPYYGCTGEVQDSRDVITE 882
Query: 939 NSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDST 998
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 883 GR-IRVVFSIPCEPNLDALIQNQHKYSVKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGS 941
Query: 999 E---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFG 1055
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F
Sbjct: 942 RRNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFS 999
Query: 1056 FLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSL 1112
++ +S +D++ DD++P + G ++V +I++WLK P + C ++DA +V
Sbjct: 1000 YIAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEK 1059
Query: 1113 IEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVP 1170
IE V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP
Sbjct: 1060 IEEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVP 1119
Query: 1171 LGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
+G RGTIIGI D +++V+FD+ FP G+ IRC RGYR+P A++NLS+G R
Sbjct: 1120 VGLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCLPGRGYRLPTSALVNLSHGSR 1177
Score = 231 bits (590), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|301762972|ref|XP_002916907.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Ailuropoda melanoleuca]
Length = 1703
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/1134 (44%), Positives = 706/1134 (62%), Gaps = 65/1134 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKALEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+T + V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTXQ------------GVTIYFSGHETPGEGEHK 177
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 178 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 234
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LK+ ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 235 VCAPEETTFHLLHLSLMREYIDYEFSVLKDK--ITFKYDIERIIDDWILMGFLVGNDFIP 292
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 293 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 352
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD------YDDGTEEVLNYANY 484
D+++ E K+G K+ + ++E ++ D EEV+ +
Sbjct: 353 VDLKWFESKVGNKYLNEAAGVAAEEAKNYKEKKKSKGQENAICWAALDKNGEEVVTSKDN 412
Query: 485 EEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYY 544
E D+D F +EF Q+K YY K+ V+++ L DQA CY++AIQW LHYY
Sbjct: 413 LEDETEDDDL-----FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYY 467
Query: 545 YNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPY 604
Y+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP Y
Sbjct: 468 YHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCY 527
Query: 605 QNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEER 664
Q+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L EER
Sbjct: 528 QHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEER 587
Query: 665 SRNRHGPMLVYTYSNVNLGT--ALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQ 722
RN+H L+ Y T + P+ FPAI K + D V + K
Sbjct: 588 KRNQHSECLMCWYDRDTEFTYPSPWPEKFPAIERCCTRYKIISLDAWRV---DISKNKIT 644
Query: 723 DVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQVA 778
V+ K LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + S++ +A
Sbjct: 645 RVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVNAESDELSVENIA 704
Query: 779 DQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAAKDM 825
+LGK++F+N+PHL E RV ++ +++ ++ G V K+
Sbjct: 705 SSVLGKSVFVNWPHLEEARVVGISDGETKFYLEEPPGTQKLYLGRTAPPSKVVHLGDKE- 763
Query: 826 QDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT 885
Q + + I++ Y + G+ I T +VY Q + RKY G+V ++ + + +
Sbjct: 764 QSNWTKEVQGISEYYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQVLP 823
Query: 886 YAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEENSFI 942
+ YQ+ V +++ KT+D++F P F L P+YG G V + V E I
Sbjct: 824 FVYQTIVKDIRAFDSRFSNIKTLDDLFPPRSMVFMLGTPYYGCTGEVQDSGDVITEGR-I 882
Query: 943 KLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE--- 999
++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 883 RVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNP 942
Query: 1000 EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKD 1059
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F ++
Sbjct: 943 HGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSYIAK 1000
Query: 1060 HSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHA 1116
+S +D++ DD++P + G ++V +I++WLK P + C ++DA +V IE
Sbjct: 1001 NSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEE 1060
Query: 1117 VDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYR 1174
V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+G R
Sbjct: 1061 VEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPVGLR 1120
Query: 1175 GTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
GTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NL++G R
Sbjct: 1121 GTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLTHGSR 1174
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKALEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|170043138|ref|XP_001849256.1| 5'-3' exoribonuclease 1 [Culex quinquefasciatus]
gi|167866570|gb|EDS29953.1| 5'-3' exoribonuclease 1 [Culex quinquefasciatus]
Length = 1609
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/1151 (43%), Positives = 709/1151 (61%), Gaps = 90/1151 (7%)
Query: 121 RLPTEKRFD--FITLKFCF----PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQ 174
R+ E+ F F L+F F P+KLFF+A+DGVAPRAKMNQQRGRRFRSA+EA+ +
Sbjct: 54 RITEEQIFSDIFHYLEFLFRMIRPQKLFFIAVDGVAPRAKMNQQRGRRFRSAREAQEQVE 113
Query: 175 KAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDV 234
+A++KG+ LP E RFDSNCITPGT FM RL + L +F+K+K++T+ LWK
Sbjct: 114 QAEKKGDVLPLEARFDSNCITPGTSFMVRLQRALEHFIKVKVSTNPLWKH---------- 163
Query: 235 C-VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSL 293
C V+LSGHETPGEGEHKIM+YIR+ K+ P ++ N RHCLYGLDADLIMLGLCTHE +FSL
Sbjct: 164 CKVVLSGHETPGEGEHKIMEYIRHAKASPGFDSNTRHCLYGLDADLIMLGLCTHERHFSL 223
Query: 294 LREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENI 353
LREEVKF K S IV EET+F+LLHL+L+R+YLELEF +++ L F F+ +
Sbjct: 224 LREEVKFGKNDKK--SSIV--EETRFYLLHLTLLREYLELEFAPVRDK--LKFEFNPYKL 277
Query: 354 IDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEK 413
IDDWVLMG+++GNDFIP+LP+LHI ALP L++ Y +VLP LDGYINEGG LNL+R E
Sbjct: 278 IDDWVLMGYMVGNDFIPHLPNLHINENALPTLFQAYMDVLPGLDGYINEGGILNLERLEV 337
Query: 414 FLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFH---KEKSKEMDPDLAALIKAT--- 467
+ +LA FD + F E Y D+QY + K G ++ F +E +MD DL+ALIKA+
Sbjct: 338 LMERLARFDRDIFLENYTDLQYFKAKRGANDTEAFDVTLEEIKADMDMDLSALIKASEDM 397
Query: 468 --DDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFS-EFGQHKTDYYHYKLDYAKVTNE 524
DDD D G E YS ED E F EF +K +YY K+ Y E
Sbjct: 398 FLDDDEDGGGER-----------YSTEDIENDPELFEKEFAAYKRNYYMTKMGYGDFNEE 446
Query: 525 VLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLP 584
+QAECYIRA+QW L YYY G SW+WYYPHHYAP+ISD+++F ++ L +EMG+PFLP
Sbjct: 447 TRAEQAECYIRALQWTLLYYYRGVSSWAWYYPHHYAPFISDVQNFKNIKLNFEMGKPFLP 506
Query: 585 FQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFID 644
FQQLL+VLPAASK+ LP Y LMT +S +++YYPE F TDLNGK+Q WEAVVLIPFID
Sbjct: 507 FQQLLSVLPAASKDHLPTAYHKLMTDPDSSVIDYYPENFGTDLNGKQQAWEAVVLIPFID 566
Query: 645 EVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTA-LAPDY-FPAINENHAVEK 702
E +L+KAM+ + LTDEE+ RN HGPM+++ Y G+A L +Y + E E
Sbjct: 567 EKRLLKAMEPCDAFLTDEEKQRNVHGPMMLFQYD--EQGSAFLGANYGLDDVAELKVKEI 624
Query: 703 PLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI 762
P+YRDD+YV NKL G + L Y+ FPT+KH+++ ++ +VKVF PSRN S+
Sbjct: 625 PIYRDDLYVPENKLVLGPSKGAILDGYIKGFPTMKHLKYHGILKEIRVKVFNFPSRNASM 684
Query: 763 IIVQDK-VQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERA 821
++ DK S Q+A ++LG +++++PHL E +V VA + D+ P E+
Sbjct: 685 VVAIDKEGDDKSTAQLAQELLGSIVYVSWPHLTEAKVVKVADAKTVYEKDREERPNNEK- 743
Query: 822 AKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIR 881
F K+I + + +L +D+G LV+ + +Y + + + +
Sbjct: 744 ------FFGTCVKAIVEHHSNRLAIDLGEIRQLVHVKTCVGSEYVLK-DDRYVLNKLWNQ 796
Query: 882 STVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENS 940
Y Q+ V +L++A +L+ Y+ + E+F C F + YGS G V+ V +
Sbjct: 797 GETMYPVQAIVTDLREALRTLKPYQEVQEMFPENCVVFLRATQWYGSMGHVVD-VTAGHK 855
Query: 941 FIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEE 1000
IK F++ +EP+L ++ + D+ +YL +Y AS + IS LLSR + +I+++
Sbjct: 856 RIKTRFEIYEEPNLDTVLKIDDEARSHYLTTYDAASSIGISANLLSRLSSTIYMVTGGRR 915
Query: 1001 GAK-----RHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFG 1055
+ NIGL ++ ++ E VG+TR+ K W Y+++ + L+K Y + P+VF
Sbjct: 916 SLNVDEKGKMNIGLQLRLVSQDIETVGYTRK--MAKNWMYSDKAIELVKAYYDKVPQVFE 973
Query: 1056 FLKDHSSDDIYLRDDVFPHQGEQR-----VAQIVSWLKEQPHAKAEVRPCGAAVVD-AKV 1109
L+ + D+ D++F GE+R + ++V+W+K Q HAKAE R CG +++ A V
Sbjct: 974 KLESFGNRDVLFEDEIF---GEKREEGSGLKELVAWIKAQDHAKAEKRSCGTKILEPAAV 1030
Query: 1110 VSLIEHAVDTCEKVEKQITLFVKPNKLYIPKPTLDKL-CPDPDTKFKLFDRVVNIRDCYT 1168
L++ ++ ++ T+FV P LY KP + + D ++L DRV+ R+
Sbjct: 1031 EELVKIRAESVRQLPTMQTMFVHPKDLY--KPGMKQARSIDYMANYELLDRVIIARETEV 1088
Query: 1169 VPLGYRGTIIGI--------VQGE--TSYDAMYDVVFDKPFPHGVKIRCSE---SRGYRM 1215
VPLGYRGTIIGI V+ E + D +D++FDK FP+G I E +R R+
Sbjct: 1089 VPLGYRGTIIGIHLAKDPNPVRQESVSKEDKYFDILFDKQFPNGTHIFGIEQTRNRVVRV 1148
Query: 1216 PAQAMINLSYG 1226
A++N+S+G
Sbjct: 1149 AEGAILNISFG 1159
Score = 224 bits (570), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 99/129 (76%), Positives = 117/129 (90%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRY+SERYPCL E+VRE Q+P+FDNLYLDMNGIIHNCSHPND+D FRITE+QI
Sbjct: 1 MGVPKFFRYMSERYPCLGELVRENQVPDFDNLYLDMNGIIHNCSHPNDSDVFFRITEEQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E LFRMI+P+KLFF+A+DGVAPRAKMNQQRGRRFRSA+EA+ ++A++KG+
Sbjct: 61 FSDIFHYLEFLFRMIRPQKLFFIAVDGVAPRAKMNQQRGRRFRSAREAQEQVEQAEKKGD 120
Query: 121 RLPTEKRFD 129
LP E RFD
Sbjct: 121 VLPLEARFD 129
>gi|157119783|ref|XP_001659504.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108875157|gb|EAT39382.1| AAEL008814-PA [Aedes aegypti]
Length = 1668
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/1359 (40%), Positives = 784/1359 (57%), Gaps = 112/1359 (8%)
Query: 121 RLPTEKRFD--FITLKFCF----PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQ 174
R+ EK F F L+F F P+KLFF+A+DGVAPRAKMNQQRGRRFRSA+EA+ +
Sbjct: 54 RITEEKIFSDIFHYLEFLFRMIRPQKLFFIAVDGVAPRAKMNQQRGRRFRSAREAQEQAE 113
Query: 175 KAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDV 234
+A++KGE LPTE RFDSNCITPGT FM RL + L +F+K+K++T+ LWK
Sbjct: 114 EAQKKGEVLPTEARFDSNCITPGTSFMVRLQKALEHFIKVKVSTNPLWKH---------- 163
Query: 235 C-VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSL 293
C VILSGHETPGEGEHKIM+YIRY KS+PD++ N RHCLYGLDADL+MLGLCTHE +FSL
Sbjct: 164 CKVILSGHETPGEGEHKIMEYIRYAKSQPDFDSNTRHCLYGLDADLVMLGLCTHEKHFSL 223
Query: 294 LREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENI 353
LREEVKF K S IV EET+F+LLHL+LMR+YLELEF +++ L F F+I +
Sbjct: 224 LREEVKFGKNDKK--SSIV--EETRFYLLHLTLMREYLELEFAPVRDK--LKFEFNIYKL 277
Query: 354 IDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEK 413
IDDWVLMG+++GNDFIP+LP LHI ALP L++ Y ++LPTLDGYINEGG LN+ R E
Sbjct: 278 IDDWVLMGYMVGNDFIPHLPHLHINENALPTLFQAYMDILPTLDGYINEGGILNMPRLEV 337
Query: 414 FLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHK-----EKSKEMDPDLAALIKATD 468
+ +LA FD + F E Y D+QY + K ++ F + EMD DL+ALIKA++
Sbjct: 338 LMNRLARFDRDIFLENYTDLQYFKSKRAHNDTEAFDVIIDDIKAEAEMDCDLSALIKASE 397
Query: 469 DDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRD 528
D + D ++ + E D E+ F EF +K +YY KL Y +
Sbjct: 398 DMFSDDEDDAEPPGDIEN------DPEF---FEKEFTAYKRNYYITKLGYQDYNQATRDE 448
Query: 529 QAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQL 588
Q ECYIRA+QW L YYY G SW+WYYPHHYAP+ISD+++ S L L +E G+PFLPFQQL
Sbjct: 449 QTECYIRALQWTLLYYYRGVPSWAWYYPHHYAPFISDLQNISSLKLNFEPGKPFLPFQQL 508
Query: 589 LAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKL 648
L+VLP ASK+ LP Y LMT NSP+++YYPE F TDLNGK+Q WEAVVLIPFIDE +L
Sbjct: 509 LSVLPTASKDHLPSAYHKLMTDPNSPVVDYYPENFETDLNGKQQAWEAVVLIPFIDEKRL 568
Query: 649 IKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDD 708
+KAM+ + LTDEE+ RN HGPMLV+ Y + A F I + E +YRD
Sbjct: 569 LKAMEPCDAFLTDEEKQRNVHGPMLVFQYDSKGTKQLPACYGFEEIEQLKVKESAIYRDQ 628
Query: 709 IYVH--PNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQ 766
+ NKL G + L Y+ FPT+KH+Q+ I+ +VKVF PSRN S+++V
Sbjct: 629 VSCDLVGNKLVLGPSKGAILDGYIKGFPTMKHLQYHGIIKEVRVKVFNFPSRNSSMVVVI 688
Query: 767 DKVQVPSLK---QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAK 823
D+ S K +A ++LG+ +++++PHL E +V VA D+++ F+K+ P R
Sbjct: 689 DRPLKDSEKTTEMLARELLGRIVYVSWPHLTEAKVVKVA--DAQVIFEKDREP---RENN 743
Query: 824 DMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRST 883
D F K+I + + +L +D+G +V+ + +Y V + + T
Sbjct: 744 D--KFFDTCSKAIVEHHNNRLAIDLGKISQMVHVKTCVGSEYVLKENRYVLNKLWNMGET 801
Query: 884 VTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFI 942
+ Y Q+ V +L++A ++L+ Y+ I E+F C F + YGS G VI V + I
Sbjct: 802 M-YPVQAIVTDLKEALKTLKPYQEIREMFPENCLVFLRATQWYGSLGHVID-VTAGHKRI 859
Query: 943 KLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDST---- 998
K F++ +EP+L +V + ++ +YL AS + IS LLSR + +I+++
Sbjct: 860 KTRFEIHEEPNLDKVVDINEEAKSHYLTMQDAASMIGISANLLSRLSSTIYMMRGARRSV 919
Query: 999 --EEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGF 1056
+EG K NIGL ++ ++ E VG+TR+ K W ++E+ V LIK+Y ++ P +F
Sbjct: 920 NIDEGGKM-NIGLQLRMVTQDVETVGYTRK--VHKSWMFSEKAVELIKSYHEKVPNLFER 976
Query: 1057 LKDHSSDDIYLRDDVFPHQGEQRVA--QIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIE 1114
L+ DI D+VF Q E V ++++W+K Q HAKAE R CG +++ V +
Sbjct: 977 LEHFGKGDILFEDEVFGEQKEGAVGLKELIAWIKSQDHAKAEKRSCGTKMLEPNAVEELV 1036
Query: 1115 HAVD-TCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGY 1173
VD K+ T+FV P LY P K D ++L DRV+ RD VPLGY
Sbjct: 1037 KIVDEQATKLPTMQTMFVHPKDLYKPGMKQAKSI-DHQANYELLDRVIIARDTEVVPLGY 1095
Query: 1174 RGTIIGI--------VQGET---SYDAMYDVVFDKPFPHGVK---IRCSESRGYRMPAQA 1219
RGTIIGI V+ E+ D +DV+FDK FP+GV+ I +++R R+ A
Sbjct: 1096 RGTIIGIHLAKDPNPVRQESIVAKSDKYFDVLFDKEFPNGVQIFGISATKNRVVRVAEGA 1155
Query: 1220 MINLSYG--ERLCGNSNPHVKNINVMQSRGERNTNYAQVTRQ--------PQRTTFYKEN 1269
++N+S+G + +P I + RN +AQ R+ P+ T +
Sbjct: 1156 VLNISFGTADLEYKQVDPSQPIILPAEEFINRNNQHAQHQRKHELVRIFPPKPTPTAESI 1215
Query: 1270 APLVNSNLQVTSPYHVKV-SRCNSQQSSVSQSPSSTMI-------------SQQSSPFNV 1315
+N ++ +P + + + S+S P++ SQ S F+
Sbjct: 1216 KKRLNERIEKKNPNKAFILANRKPLEESISSDPNAQTACDFEKLWNKLRESSQAPSTFDD 1275
Query: 1316 KP-----TEKTEPPPPHKLNQVNTSSAPKEKPRTSEQNQIKSNGNEQKVII---NKEERC 1367
+ ++ + PPPP K ++ ++E+N +K + + ++ +++E
Sbjct: 1276 RDIKSFISKNSIPPPPLK-TAIDVVPEKNAADTSTEENSVKDPSDMLRKMLRINSQDETA 1334
Query: 1368 IFSNATYSIPTTQNSELFSTGGMSFFGYPNLLDIPENKN 1406
I S + T N + +T + P +++IP KN
Sbjct: 1335 ISSGVPNGVVPTNNEGILNTLVPAIPAVPPVVNIPMPKN 1373
Score = 221 bits (563), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/129 (78%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE++RE Q+P+FDNLYLDMNGIIHNCSHPND+D FRITE++I
Sbjct: 1 MGVPKFFRYISERYPCLSELIRENQVPDFDNLYLDMNGIIHNCSHPNDSDVFFRITEEKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E LFRMI+P+KLFF+A+DGVAPRAKMNQQRGRRFRSA+EA+ ++A++KGE
Sbjct: 61 FSDIFHYLEFLFRMIRPQKLFFIAVDGVAPRAKMNQQRGRRFRSAREAQEQAEEAQKKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 VLPTEARFD 129
>gi|347971872|ref|XP_313715.5| AGAP004430-PA [Anopheles gambiae str. PEST]
gi|333469066|gb|EAA09254.6| AGAP004430-PA [Anopheles gambiae str. PEST]
Length = 1705
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/1130 (42%), Positives = 678/1130 (60%), Gaps = 69/1130 (6%)
Query: 133 LKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSN 192
K P+++FF+A+DGVAPRAKMNQQRGRRFRSA EA+ L +KAK KGE + +E FDSN
Sbjct: 72 FKLIRPQQVFFIAVDGVAPRAKMNQQRGRRFRSAAEAQDLLEKAKAKGEEISSESPFDSN 131
Query: 193 CITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIM 252
CITPGT FM RL L++F+++KI TD+LWK VILSGHETPGEGEHKIM
Sbjct: 132 CITPGTSFMVRLQNALQHFIQVKIATDRLWKA---------CTVILSGHETPGEGEHKIM 182
Query: 253 DYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIV 312
+YIR+ K++P +NPN RHCLYGLDADLIMLGLCTHE YFSLLREEVKF K++K S +
Sbjct: 183 EYIRHAKAQPGFNPNTRHCLYGLDADLIMLGLCTHERYFSLLREEVKFG-KNDKKTSNL- 240
Query: 313 TPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
+E +F+LLHL+L+ +YLELEF +++ L FPF I +IDDW+L+ +L+GNDFIP++
Sbjct: 241 --KEIRFYLLHLTLLSEYLELEFASVRD--RLRFPFDIHKLIDDWILLVYLVGNDFIPHM 296
Query: 373 PDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
P LHI ALP LY+ Y +VLP +DGYINE G LNL R + + +LA+FD + F ++Y D
Sbjct: 297 PHLHINENALPTLYEAYMDVLPNMDGYINEAGILNLPRLQMLMRRLANFDRDMFLDRYTD 356
Query: 433 IQYLEGKMGKKFSDVFHKEK-----SKEMDPDLAALIKATD--DDYDDGTEEVLNYANYE 485
++YLEGK GK D F + + EMD DL ALI +++ D + + + E
Sbjct: 357 LKYLEGKCGKNNLDAFDVDANEIIGASEMDKDLMALIMSSEMLDSEGEDNAAPVTLGDIE 416
Query: 486 EYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYY 545
D E F EF +K +YY K+ YA T EV +QAECYIRA+QW LHYYY
Sbjct: 417 N------DPEL---FEQEFKNYKRNYYMSKMGYADFTEEVRAEQAECYIRALQWTLHYYY 467
Query: 546 NGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQ 605
G VSWSWYYPHHYAP+ISD+ +F+HL L YE+ PFLPFQQLL+VLPAASK+ LP Y
Sbjct: 468 RGVVSWSWYYPHHYAPFISDVDNFAHLKLDYELARPFLPFQQLLSVLPAASKQHLPSAYH 527
Query: 606 NLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERS 665
LMT NS + ++YP FATDLNGK+Q WEAVVLIPFIDE +L+KAM + LTDEE+
Sbjct: 528 QLMTDPNSSVYDFYPVNFATDLNGKQQAWEAVVLIPFIDEKRLLKAMGPCDAFLTDEEKQ 587
Query: 666 RNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVN 725
RN HGPML Y Y A F ++E H ++RDD+ V N+L G Q
Sbjct: 588 RNVHGPMLKYQYDTKQHAPLEAKYGFDRVDELHVKCSEIWRDDLRVAENRLVLGPSQGAV 647
Query: 726 LKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQD--KVQVPSLKQVADQILG 783
L Y FPT H+ + +++ +VK+F S+NES+++V D Q ++A ++LG
Sbjct: 648 LHGYAKGFPTFAHLPYHGELKELRVKIFNFASKNESMVVVLDTPDGQPSDTAELAKELLG 707
Query: 784 KTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTK 843
K + +++PHL+E V V D ++++NS P+ + +F + +SI + +
Sbjct: 708 KVVHVSWPHLMEAIV--VRVSDRSKTYERNSEPL-----PTDERSFNMWCRSIIEHNNNR 760
Query: 844 LGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAY--QSAVLNLQQARES 901
L +++G + LV+ + +Y G V ++ + +T+ AY Q+ + +LQ
Sbjct: 761 LAINVGTIKQLVHVRIAVGTEYVLKDNGFVLKK---LWNTIDTAYPAQTIIQDLQDIMAK 817
Query: 902 LE-YKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHL 960
+ Y ++E+F F + YGS G V+ V ++ F V +EPDL + ++
Sbjct: 818 QKPYIEMEEMFPRESVVFLRATEFYGSMGNVVD-VSGSTKRVQARFLVYEEPDLGQVYNV 876
Query: 961 QDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEG----AKRHNIGLNIKFSRK 1016
++ Y + A+ L IS LL + TGSI + K NIGL ++ K
Sbjct: 877 HRQSLQGYRNANDTAAMLGISVGLLLQLTGSILVAPGGHRALNVDEKSLNIGLRLRMISK 936
Query: 1017 NEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQG 1076
+EE VG+ R+ K W ++++ V L++ YM++ P +F L +++ D+F
Sbjct: 937 DEEAVGYCRK--VNKTWLFSDKTVKLMQQYMERAPGLFEKLDCSRKTNVHFETDLFGEGN 994
Query: 1077 EQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE--KQITLFVKPN 1134
E ++ ++ WLK Q H +E R CG +++ K + + +D + + K T+FV P
Sbjct: 995 EGKLQELYDWLKVQEHVNSERRSCGIILLEEKAIEALAETIDKYQTLHQPKVQTMFVDPK 1054
Query: 1135 KLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI--------VQGET- 1185
+LY P K+ DP F+L DR++ +++ VP+G RGTIIGI V+ E
Sbjct: 1055 ELYRPGMKNAKMI-DPSAHFELLDRIIVVQEKEDVPVGARGTIIGIHRVSDPNPVRREAI 1113
Query: 1186 -SYDAMYDVVFDKPFPHGV---KIRCSESRGYRMPAQAMINLSYGERLCG 1231
D ++V+FDKPF GV I +E R R+ ++N+S+G+ G
Sbjct: 1114 GQEDTNFEVLFDKPFYKGVDIYNISSTEKRVLRLSQSVIMNISHGKASAG 1163
Score = 217 bits (553), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 115/129 (89%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRY+SERYPCLSE++RE Q+PEFDNLYLDMNGIIHNCSHPND D HFRI+E+ I
Sbjct: 1 MGVPKFFRYMSERYPCLSELLRENQVPEFDNLYLDMNGIIHNCSHPNDADVHFRISEEMI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F+ IFHY+E LF++I+P+++FF+A+DGVAPRAKMNQQRGRRFRSA EA+ L +KAK KGE
Sbjct: 61 FEGIFHYVEYLFKLIRPQQVFFIAVDGVAPRAKMNQQRGRRFRSAAEAQDLLEKAKAKGE 120
Query: 121 RLPTEKRFD 129
+ +E FD
Sbjct: 121 EISSESPFD 129
>gi|426342416|ref|XP_004037841.1| PREDICTED: 5'-3' exoribonuclease 1-like [Gorilla gorilla gorilla]
Length = 1432
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/1121 (43%), Positives = 674/1121 (60%), Gaps = 110/1121 (9%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKMKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + +G E + +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWAALDKN--EG-EMITS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
LHYYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LL
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAPFLSDIQNISTLKIHFELGKPFKPFEQLLAVLPAASKNLL 526
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L
Sbjct: 527 PACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLK 586
Query: 661 DEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
EER RN+H L+ Y + + P+ FPAI K + D V NK +
Sbjct: 587 KEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK- 645
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVA 778
+ + LY FPTLKH++ ++ + V+VFQQ SR E++++ ++ +
Sbjct: 646 -ITRIDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMML-----EILVDAESD 699
Query: 779 DQILGKTIFINY----PHLIEIRVQAVATKDSRISF-DKNSGPVFERAAKDMQDAFQLSK 833
+ LG+ + + Y P ++ A + DK AK++Q
Sbjct: 700 ELSLGQPVILFYLEEPPGTQKLYSGRTAPPSKVVHLGDKEQS----NWAKEVQ------- 748
Query: 834 KSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVL 893
I++ + + G+ I T +VY Q + RKY G+V ++ + + V + YQ+ V
Sbjct: 749 -GISEHFLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQVVPFVYQTIVK 807
Query: 894 NLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEENSFIKLSFKVQQ 950
+++ KT+D++F F L P+YG G V + V E I++ F +
Sbjct: 808 DIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEGR-IRVIFSIPC 866
Query: 951 EPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE---EGAKRHNI 1007
EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI + G + N+
Sbjct: 867 EPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANV 926
Query: 1008 GLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYL 1067
GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F ++ +S +D++
Sbjct: 927 GLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSYIAKNSQEDVFY 984
Query: 1068 RDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQI 1127
DD++P + E K K++
Sbjct: 985 EDDIWPGENENG------------------------------------------KNNKKV 1002
Query: 1128 TLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSY 1187
+ VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+G RGTIIGI
Sbjct: 1003 RVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPVGLRGTIIGIKGANREA 1062
Query: 1188 DAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1063 DVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1103
Score = 230 bits (587), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKMKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|395833059|ref|XP_003789564.1| PREDICTED: 5'-3' exoribonuclease 1 [Otolemur garnettii]
Length = 1666
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/1135 (41%), Positives = 671/1135 (59%), Gaps = 104/1135 (9%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKK---AQR 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYE----E 486
D+++ E K+G K+ + + + G E + +A E E
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAA-------EEAKNYKEKKKSKGPENSICWAALEKNKGE 408
Query: 487 YYYSDEDEEWRTN----FFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLH 542
S ++ E T F +EF Q+K YY K+ V+++ L +QA CY++AIQW LH
Sbjct: 409 VVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLANQAACYVQAIQWILH 468
Query: 543 YYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPE 602
YYY+G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP
Sbjct: 469 YYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPT 528
Query: 603 PYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDE 662
YQ +L++AM+A H L E
Sbjct: 529 CYQK----------------------------------------RLLEAMEACNHSLKKE 548
Query: 663 ERSRNRHGPMLVYTYSNVNLGT--ALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGL 720
E+ RN+H L+ Y T + P+ FPA+ K + D V NK + +
Sbjct: 549 EKKRNQHSECLMCWYDGDTEFTYPSPWPEKFPAVERCCTRYKIISLDAWRVDINKNK--I 606
Query: 721 CQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQV 777
+ LY FPTLK+++ ++ + V+VFQQ SR E++ I++ + S++ V
Sbjct: 607 TKVDQKALYFCGFPTLKNIKHKFFLKKSGVQVFQQSSRGENMMLEILMNAESDELSIENV 666
Query: 778 ADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAAKD 824
A +LGK++F+N+PHL E RV AV+ +++ ++ G V K+
Sbjct: 667 ASSVLGKSVFVNWPHLEEARVVAVSDGETKFFLEEPPGTQKLYLGRTAPPSKVVHLGDKE 726
Query: 825 MQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTV 884
Q + + I++ Y + G+ I T +VY Q + RKY G V ++ + + V
Sbjct: 727 -QSNWTKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQVNQNGDVRLEKQWSKQVV 785
Query: 885 TYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEENSF 941
+ YQ+ V +++ KT+D++F P F L P+YG G V + V E
Sbjct: 786 PFVYQTVVQDIRAFDSRFSNIKTLDDLFPPRSMVFMLGTPYYGCTGEVQDSGDVITEGR- 844
Query: 942 IKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE-- 999
I++ F + EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI +
Sbjct: 845 IRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRN 904
Query: 1000 -EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLK 1058
G + N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F ++
Sbjct: 905 PHGDHKANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSYIS 962
Query: 1059 DHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEH 1115
+S +D++ DD++P + G ++V +I++WLK P + C ++DA +V IE
Sbjct: 963 KNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEE 1022
Query: 1116 AVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGY 1173
V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+G
Sbjct: 1023 EVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPVGL 1082
Query: 1174 RGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
RGTIIGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1083 RGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGTR 1137
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|390353506|ref|XP_003728123.1| PREDICTED: 5'-3' exoribonuclease 1-like [Strongylocentrotus
purpuratus]
Length = 1915
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/1121 (42%), Positives = 658/1121 (58%), Gaps = 130/1121 (11%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT 185
F +I + F P+K+FFMA+DGVAPRAKMNQQRGRRFRSA EAE E++A KGE LP
Sbjct: 65 FHYIEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSALEAEEREKEAVRKGETLPD 124
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPG 245
EKRFDSNCITPGT FM RL +QL+YFV KIT D W+ + + LSGHETPG
Sbjct: 125 EKRFDSNCITPGTDFMVRLQRQLKYFVNTKITEDS---------KWQGIRIFLSGHETPG 175
Query: 246 EGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN 305
EGEHKIMD+IR K++ +++PN RHCLYGLDADLIMLGL +HEP+FSLLREEV+F ++
Sbjct: 176 EGEHKIMDFIRAEKAQKEHDPNTRHCLYGLDADLIMLGLISHEPHFSLLREEVRFGKQAK 235
Query: 306 KGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIG 365
+ T EET F LLHLSL R+YL LEF +K+ + + F E IIDDWVL+GFL+G
Sbjct: 236 R----PTTVEETTFHLLHLSLFREYLALEFSAVKD--QIDW-FDAECIIDDWVLLGFLVG 288
Query: 366 NDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQ 425
NDF+PNLPDLHI + ALPLLYK Y +VLPTLDGY+NEGG+LNL RFEKF+ +L+ FD+E
Sbjct: 289 NDFVPNLPDLHISHSALPLLYKTYIKVLPTLDGYLNEGGHLNLPRFEKFMKELSKFDYEN 348
Query: 426 FREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYE 485
F + D+ +LEGK + K K EM + ++A E+ + N E
Sbjct: 349 FDSQSIDLSFLEGKQ----DENAWKSKKVEMKKAIREKLQA----------EIPGFMNME 394
Query: 486 EYYYSDEDE----EWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNL 541
D DE E ++F +F K T +++ D YI AIQW L
Sbjct: 395 WIENKDIDELSSDEEGEDYFDKF--------------RKQTAQIVSD----YIYAIQWIL 436
Query: 542 HYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLP 601
HYYYNG SWSWYYPHHY+PY+SD+KDFS L + + G+PFLPF+QLLAVLP AS++ LP
Sbjct: 437 HYYYNGIQSWSWYYPHHYSPYMSDLKDFSDLVVTLDKGQPFLPFEQLLAVLPPASRDHLP 496
Query: 602 EPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTD 661
+ Y LM ENSPILEYYP EF DLNGK Q WEAVVLI
Sbjct: 497 QAYHPLMLNENSPILEYYPLEFEQDLNGKLQAWEAVVLI--------------------- 535
Query: 662 EERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLC 721
P I+EN +D K R C
Sbjct: 536 ------------------------------PFIDENRLWAGMKMYEDKLTEAEKKRN--C 563
Query: 722 QDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQ 780
+L LY T L + H++ NA VKVFQQPSR E+ I+ V Q KQ+A +
Sbjct: 564 HSEHL-LYTT---DLANPHTYHEVRNADVKVFQQPSRGENCILSVNATDQKSDAKQLAKE 619
Query: 781 ILGKTIFINYPHLIEIRVQAVATKDSRISF--DKNSGPVFERAAKDMQ-DAFQLSKKSIT 837
+LGKT+F +PHL E++V AV+ R D G + E K + D ++ ++I
Sbjct: 620 LLGKTVFAEWPHLKEVKVVAVSDGQYRYELIEDSREGSMQEMKLKGSEADKWKRDARTIG 679
Query: 838 DGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQ 897
+ Y+ + GV+I T+V++Y P+ R+Y G G +T ++ + S + YAYQ + ++
Sbjct: 680 EEYFRRKGVNIRETKVILYACPLLGRRYACGLGGNITLEKQWTLSPIPYAYQVTLKDIAI 739
Query: 898 ARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSD 956
S ++KT+ E++ CF L NPHYG G V T ++ +++ F EP+L
Sbjct: 740 HDPSFHQFKTLSELYPNDAPCFMLGNPHYGCQGKVEDTSQDR---VQVLFSAPTEPNLEY 796
Query: 957 LVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDS-----TEEGAKRH--NIGL 1009
+ Q YL SY VA +L IS L SR +GSI++ ++EG + N+GL
Sbjct: 797 IKATQHSHAVQYLDSYVVAQRLGISSLQASRLSGSIYVTRGPRPSRSDEGFRGSGVNVGL 856
Query: 1010 NIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRD 1069
N+KF++ +EV GFT+R++ K W Y+ Q++ ++ Y+ QFP V FL+ +D +
Sbjct: 857 NLKFNKSEQEVPGFTKRNDEGK-WIYSIQLLEILDAYISQFPAVLAFLRGKGFNDSLFEE 915
Query: 1070 DVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKV--EKQI 1127
++F + + ++ +W+++Q KA G+ ++A V+ LIE ++ ++ K++
Sbjct: 916 EMF-AGADYGLEEVKAWIEKQDSTKAPKSKIGSKALEAPVIKLIEEEIEKAKESPSRKKL 974
Query: 1128 TLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSY 1187
L V+P+ LY P L DPD ++LFDRV+N+R+ +TVPLG RG + GI G T
Sbjct: 975 KLSVRPHLLYRPMEGQGNLIADPDADYQLFDRVINVREGFTVPLGLRGVVTGIHTGNTVL 1034
Query: 1188 DAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
D YDVVFD+ FP +++RC+ RGYR+ ++IN+SYG R
Sbjct: 1035 DTTYDVVFDEEFPGALELRCTGKRGYRLNPTSLINISYGHR 1075
Score = 223 bits (568), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 99/129 (76%), Positives = 116/129 (89%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ SERYPCLSEVV+E QIPEFDNLYLDMNGIIH C+HPND+D HFR+TE+ +
Sbjct: 1 MGVPKFYRWQSERYPCLSEVVKENQIPEFDNLYLDMNGIIHTCTHPNDDDVHFRMTEEDM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F+ IFHYIE+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSA EAE E++A KGE
Sbjct: 61 FKSIFHYIEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSALEAEEREKEAVRKGE 120
Query: 121 RLPTEKRFD 129
LP EKRFD
Sbjct: 121 TLPDEKRFD 129
>gi|194892948|ref|XP_001977773.1| GG18055 [Drosophila erecta]
gi|190649422|gb|EDV46700.1| GG18055 [Drosophila erecta]
Length = 1583
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/1255 (38%), Positives = 713/1255 (56%), Gaps = 113/1255 (9%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P++LFF+A+DGVAPRAKMNQQR RRFRSA+EAE LE KA ++GER E RFDSNCITPG
Sbjct: 77 PQRLFFLAVDGVAPRAKMNQQRSRRFRSAREAEQLEAKAAQRGERREHE-RFDSNCITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL + LR F+K KI+TD LW+ VILSG ETPGEGEHKIMDYIRY
Sbjct: 136 TEFMVRLQEGLRAFLKTKISTDPLWQQ---------CSVILSGQETPGEGEHKIMDYIRY 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
MK++PD++PN RHCLYGLDADLI+LGLCTHE +F +LREEVKF + + EET
Sbjct: 187 MKAQPDFDPNTRHCLYGLDADLIILGLCTHELHFVVLREEVKFGRNVKR-----TSVEET 241
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
+FFLLHL L+R+YLELEF L + +IDDWVLMGF++GNDFIP+LP +HI
Sbjct: 242 RFFLLHLGLLREYLELEFDAL---NTAERKLDVSQLIDDWVLMGFMVGNDFIPHLPCMHI 298
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
+ ALPLLY+ Y + PTL G INE G LNL+R + FL+ LA + E F+E D++Y+
Sbjct: 299 SSNALPLLYRTYISIYPTLGGNINENGKLNLRRLQIFLSALAEVELELFKEHADDLKYMN 358
Query: 438 GKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWR 497
K DV +S+++D DL ALI + Y+DG+EE +SDE+
Sbjct: 359 AKTEAFDVDVAEITESQDIDSDLGALISESMKLYEDGSEE----------DWSDEE---- 404
Query: 498 TNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPH 557
+E +K +YY K + +++L + Y+ A+QW L YYY G SW WYYP
Sbjct: 405 AVLMNELKNYKRNYYRNKFN-RDPQSDLLEELGHHYVNALQWVLDYYYRGVQSWDWYYPF 463
Query: 558 HYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILE 617
HYAP+ISD+++ + + ++MG PFLPFQQLLAVLP AS +LLP Y +LM L +SP+ E
Sbjct: 464 HYAPFISDLRNIEQVQIDFQMGTPFLPFQQLLAVLPTASCKLLPAAYHDLMVLPSSPLAE 523
Query: 618 YYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
+YP EF +DLNGKK DWEAVVLIPFIDE +L+ AM E L+ ER RNRHGPM +Y Y
Sbjct: 524 FYPLEFESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEEQLSLAERERNRHGPMYLYNY 583
Query: 678 SNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLC---QDVNLKLYVTHFP 734
S G + A+ E + E + +I ++ L +C + ++ FP
Sbjct: 584 SAEAQGPMPSHPPLKALPELYCTEVAKWSREIALN---LPHSVCVEQPNAARHVFFPGFP 640
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVP-SLKQVADQILGKTIFINYPHL 793
T++H+ F ++ + +VKVF+Q SRN+++++ K Q+ +L+ VA Q L + + I +PHL
Sbjct: 641 TMQHLPFDFELRHDRVKVFEQVSRNQNMVLKPRKRQLEDTLEAVAGQYLEQVVHIGWPHL 700
Query: 794 IEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEV 853
++ +V VAT+D R+ E A++ F K + + + T++G+ N +V
Sbjct: 701 VKAKVVRVATRDQRVD--------EEGIAQNDSRRFDSECKMLEEHFTTRMGIKFANYDV 752
Query: 854 LVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESL--EYKTIDEIF 911
LVY + FG +G + + ++ S Y Q V L RES+ ++ ++++ F
Sbjct: 753 LVYVRTFAGSSTVFGAKGTLKVRDSWSTSITGYPAQGVVAEL-AVRESMRKQFHSVEDFF 811
Query: 912 YPGCQCFALSNPHYGSGGCVIS-TVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLP 970
G F +++P+YGS G V + N I++S +V+ EP++ LQ++ ++L
Sbjct: 812 PVGSTIFLITDPYYGSEGTVQDPLLAHTNGRIQVSIRVRPEPEVGPARLLQEERNRDFLN 871
Query: 971 SYTVASKLSISPLLLSRFTGSIFIIDSTE----EGAKRHNIGLNIKFSRKNEEVVGFTRR 1026
++ V L IS L R TG+++++ E +HNIGL +K+ R+NEE G+ R
Sbjct: 872 TFQVCHMLRISGRALGRLTGTVWVVLGPRRQKMENVTKHNIGLQLKYPRQNEERAGYCCR 931
Query: 1027 DETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYL-RDDVFPHQ-GEQRVAQIV 1084
T +WFY+ + L+++Y +++P+V F D + Y+ DVFP+Q G+ RV +
Sbjct: 932 --TNNQWFYSSLALDLMRDYCERYPDVITFFGDTNDRAEYVFEQDVFPNQVGQHRVEDLA 989
Query: 1085 SWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE-KQITLFVKPNKLYIPKPTL 1143
+W+++QPH K E CG+ V + V L+ AVD + K + L VKP+ L P TL
Sbjct: 990 NWVRQQPHMKVERISCGSKTVCRETVELLIAAVDELRSLPVKDVKLQVKPHLLIKPNVTL 1049
Query: 1144 DKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI----------VQGETSYDAMYDV 1193
+ P +LFDRVV +R Y VP+G +GT+IGI ++ + D +V
Sbjct: 1050 PEAY-RPRRPVRLFDRVVIVRTVYMVPVGIKGTVIGIHPVTDPNPVRLECVHAVDTFCEV 1108
Query: 1194 VFDKPFP-----HGVKIRCSESRGYRMPAQAMINLSYGERLCGNSNPHVKNINVMQSRGE 1248
+FDKP P HG+ ++ R Y++P A++ ++ GE + E
Sbjct: 1109 LFDKPVPNCNDIHGI----AQDRVYKVPENALVIINTGE------------------QAE 1146
Query: 1249 RNTNYAQVTRQPQRTTFYKE-----NAPLVNSNLQVTSPYHVKVSRCNSQQSSVSQSPSS 1303
+ T Q R PQ E ++ V + P +K C+ + S +
Sbjct: 1147 KQTENEQSVRDPQPNNTRDEPVRASSSRYVTAAGSTWVPITMKTQICDEFVKTRGDSKAR 1206
Query: 1304 TMISQQSSPFNVKPTEKTEPPPPHKL-NQVNTSSAPKEKPRTSEQNQIKSNGNEQ 1357
T + KP + +P P ++ N SAP KP+ + N + +Q
Sbjct: 1207 TN--------SHKPVPEPKPVAPDQVSNWRERVSAPTTKPQPAPDNWRNNRSRQQ 1253
Score = 211 bits (537), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 113/129 (87%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE+ RE+ IPEFDNLYLDMNGI+HNCSHP+DN+ HF + E QI
Sbjct: 1 MGVPKFFRYISERYPCLSELAREHSIPEFDNLYLDMNGIVHNCSHPDDNNIHFHLEEHQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FQDIF+Y++ LF +I+P++LFF+A+DGVAPRAKMNQQR RRFRSA+EAE LE KA ++GE
Sbjct: 61 FQDIFNYVDKLFYLIKPQRLFFLAVDGVAPRAKMNQQRSRRFRSAREAEQLEAKAAQRGE 120
Query: 121 RLPTEKRFD 129
R E RFD
Sbjct: 121 RREHE-RFD 128
>gi|195479788|ref|XP_002101029.1| GE17387 [Drosophila yakuba]
gi|194188553|gb|EDX02137.1| GE17387 [Drosophila yakuba]
Length = 1581
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/1154 (40%), Positives = 680/1154 (58%), Gaps = 99/1154 (8%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P++LFF+A+DGVAPRAKMNQQR RRFRSA+EAE LE KA ++GER E RFDSNCITPG
Sbjct: 77 PQRLFFLAVDGVAPRAKMNQQRSRRFRSAREAEQLEAKAAQRGERREHE-RFDSNCITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL + LR F+K KI+TD LW+ VILSG ETPGEGEHKIMDYIRY
Sbjct: 136 TEFMVRLQEGLRAFLKTKISTDPLWQR---------CSVILSGQETPGEGEHKIMDYIRY 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
MK++PD++PN RHCLYGLDADLI+LGLCTHE +F +LREEVKF + + EET
Sbjct: 187 MKAQPDFDPNTRHCLYGLDADLIILGLCTHELHFVVLREEVKFGRNVKR-----TSVEET 241
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
+FFLLHL L+R+YLELEF L + +IDDWVLMGF++GNDFIP+LP LHI
Sbjct: 242 RFFLLHLGLLREYLELEFDAL---STAERKLDVAQLIDDWVLMGFMVGNDFIPHLPCLHI 298
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
+ ALPLLY+ Y + PTL G INE G LNL R + F++ L + EQF+E D++Y+
Sbjct: 299 SSNALPLLYRTYIRIYPTLGGNINENGKLNLHRLQIFMSALTEVELEQFKEHADDLKYMN 358
Query: 438 GKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWR 497
K DV +S+ +D DL ALI + Y+D +EE +SDE+
Sbjct: 359 AKTEAFDIDVAEITESQNIDSDLGALINESMKLYEDDSEE----------DWSDEE---- 404
Query: 498 TNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPH 557
+EF +K ++Y K E++ + Y+ A+QW L YYY G SW WYYP
Sbjct: 405 AVLMNEFKNYKRNFYRNKFK-RDPQGELIEELGHHYVNALQWVLDYYYRGVQSWDWYYPF 463
Query: 558 HYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILE 617
HYAP+ISD+++ + + ++MG PFLPFQQLLAVLPAAS +LLP Y +LM L +SP+ E
Sbjct: 464 HYAPFISDLRNIEQVQIDFQMGTPFLPFQQLLAVLPAASSKLLPVAYHDLMLLASSPLAE 523
Query: 618 YYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
+YP EF +DLNGKK DWEAVVLIPFIDE +L+ AM E L+ ER RNRHGPM +Y Y
Sbjct: 524 FYPLEFESDLNGKKHDWEAVVLIPFIDERRLLAAMLPCEAQLSLAERERNRHGPMYLYNY 583
Query: 678 SNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDV---NLKLYVTHFP 734
S G A A+ E + E + +I ++ L +C ++ ++ FP
Sbjct: 584 SAEAQGPMPAHPPLRALPELYCTEVAKWSREIALN---LPHSVCVELPNAARHVFFPGFP 640
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVP-SLKQVADQILGKTIFINYPHL 793
T++H+ F ++ + +VKVF+Q SRN+++++ K Q+ +L+ VA Q L + + I +PHL
Sbjct: 641 TMQHLPFDFELRHDRVKVFEQVSRNQNMVLKPRKRQLEDTLEAVAGQYLEQVVHIGWPHL 700
Query: 794 IEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEV 853
++ +V VAT+D R+ E A++ F K++ + + T++G+ N +V
Sbjct: 701 VKAKVVRVATRDQRVD--------VEGIAQNDSRRFDSECKTLQEHFTTRMGIQFANYDV 752
Query: 854 LVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESL--EYKTIDEIF 911
LVY + R FG +G + + ++ S Y Q V L RE++ +++ +++ F
Sbjct: 753 LVYVRTFAGRSTEFGAKGALKVRDSWSSSVTGYPAQGVVAEL-AVRENMRKQFRNVEDFF 811
Query: 912 YPGCQCFALSNPHYGSGGCVIS-TVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLP 970
G F +++P+YGS G V + N I+++ +V+ EP++ LQ++ +YL
Sbjct: 812 PAGSTIFLITDPYYGSEGTVQDPLLAYTNGRIQVNIRVRPEPEVKAARLLQEERDRDYLS 871
Query: 971 SYTVASKLSISPLLLSRFTGSIFII----DSTEEGAKRHNIGLNIKFSRKNEEVVGFTRR 1026
+Y V L IS L R TG+++++ E +HNIGL +K+ R+NEE G+ R
Sbjct: 872 TYQVCHLLRISGRALGRLTGTVWVVLGPRRQKMENVTKHNIGLQLKYPRQNEERAGYCCR 931
Query: 1027 DETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYL-RDDVFPHQ-GEQRVAQIV 1084
T +WFY+ + L+++Y +++P+V F D + Y+ +DVFP + G+ RV ++
Sbjct: 932 --TNNQWFYSSLALDLMRDYCERYPDVITFFGDSNDRAEYVFEEDVFPDEVGQHRVEELA 989
Query: 1085 SWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE-KQITLFVKPNKLYIPKPTL 1143
+W+++QPH K E CG+ V + V L+ AV+ + K + L VKP+ L P TL
Sbjct: 990 NWVRQQPHMKVERIACGSKTVCRETVELLMAAVEELRSLPVKDVKLQVKPHLLIKPNVTL 1049
Query: 1144 DKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI----------VQGETSYDAMYDV 1193
+ P +LFDRVV +R Y VP+G +GT+IGI ++ + D +V
Sbjct: 1050 PE-AYRPRRPVRLFDRVVIVRTIYMVPVGIKGTVIGIHPVTDPNPVRLECVHAVDTFCEV 1108
Query: 1194 VFDKPFP-----HGVKIRCSESRGYRMPAQAMINLSYGERLCGNSNPHVKNINVMQSRGE 1248
+FDKP P HG+ ++ R Y++P A++ ++ E + E
Sbjct: 1109 LFDKPVPNCNDIHGI----AQDRVYKVPENALVIINTDE------------------QAE 1146
Query: 1249 RNTNYAQVTRQPQR 1262
+ + AQ R PQ+
Sbjct: 1147 KQNDSAQSARDPQQ 1160
Score = 211 bits (537), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 113/129 (87%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE+ RE+ IPEFDNLYLDMNGI+HNCSHP+DN+ HF + E QI
Sbjct: 1 MGVPKFFRYISERYPCLSELAREHSIPEFDNLYLDMNGIVHNCSHPDDNNIHFHLEEHQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FQDIF+Y++ LF +I+P++LFF+A+DGVAPRAKMNQQR RRFRSA+EAE LE KA ++GE
Sbjct: 61 FQDIFNYVDKLFYLIKPQRLFFLAVDGVAPRAKMNQQRSRRFRSAREAEQLEAKAAQRGE 120
Query: 121 RLPTEKRFD 129
R E RFD
Sbjct: 121 RREHE-RFD 128
>gi|345326399|ref|XP_003431040.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Ornithorhynchus anatinus]
Length = 1614
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/1083 (42%), Positives = 661/1083 (61%), Gaps = 75/1083 (6%)
Query: 188 RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEG 247
+F+ + GT FM RLH+ L+YFV +KI+TDK W+ V + LSGHETPGEG
Sbjct: 28 QFNLTLLGWGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYLSGHETPGEG 78
Query: 248 EHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKG 307
EHKIM++IR K+K D++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F+ K +
Sbjct: 79 EHKIMEFIRSEKAKKDHDPNTRHCLYGLDADLIMLGLTSHESHFSLLREEVRFSGKKTQ- 137
Query: 308 GSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGND 367
++ PEET F LLHLSLMR+Y++ EF LK +SF + IE IIDDW+LMGFL+GND
Sbjct: 138 --RVCAPEETTFHLLHLSLMREYIDYEFSVLKSK--ISFKYDIERIIDDWILMGFLVGND 193
Query: 368 FIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFR 427
FIP+LP LHI + ALPLLY+ Y LP L GYINE G+LNL RFEK+L KL+ FD E F
Sbjct: 194 FIPHLPHLHINHDALPLLYRTYMTTLPELGGYINENGHLNLPRFEKYLVKLSDFDREHFN 253
Query: 428 EKYADIQYLEGKMGKKFSDVFH-------------KEKSKEMDPDLAALIKATDDDYDDG 474
E + D+++ E K+G K+ + K KS+E LAAL K +
Sbjct: 254 EVFVDLKWFESKVGNKYLNEAAGIAAEEAKNYKQKKLKSQENSICLAALNKTEGE----- 308
Query: 475 TEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYI 534
A + DE E+ F +EF Q+K YY K+ V++E L DQAECYI
Sbjct: 309 -------ATTSKSVLEDEPED-DDLFETEFRQYKRTYYMTKMGVEVVSDEFLADQAECYI 360
Query: 535 RAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPA 594
+AIQW LHYYY+G SWSW+YP+HYAPY+SDI++ +++E+G+PF+PF+QLLAVLPA
Sbjct: 361 QAIQWILHYYYHGVQSWSWFYPYHYAPYLSDIRNIKEFKIQFELGKPFMPFEQLLAVLPA 420
Query: 595 ASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDA 654
ASK+LLP YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+
Sbjct: 421 ASKDLLPVCYQHLMTSEDSPIIEYYPTDFKTDLNGKQQEWEAVVLIPFIDENRLLQAMEP 480
Query: 655 VEHLLTDEERSRNRHGPMLVYTYSNVNLGTALA--PDYFPAINENHAVEKPLYRDDIYVH 712
L EE +RNRH L+ +Y L+ P+ FPAI H + D +V
Sbjct: 481 CNKNLKKEEETRNRHSECLMCSYDKELEFRYLSPWPEKFPAIERCHTRYSLISLDAWHV- 539
Query: 713 PNKLRKGLCQDVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII---VQDK 768
+ V+ K LY FPTLKH++ ++ A V+VFQQ SR E++++ V ++
Sbjct: 540 --DISHNTITKVDQKALYFCGFPTLKHIKHKFYLKKAGVQVFQQSSRGENMLLEIHVNEQ 597
Query: 769 VQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSG-----------PV 817
+++ VA +LGK++F+N+PHL E RV AV+ +++ ++ G P
Sbjct: 598 PNELTIENVAASVLGKSVFVNWPHLEEARVVAVSDGETKFFLEEPQGTQKLYLGKTAPPT 657
Query: 818 FERAAKDMQDAFQLSK-KSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQ 876
D + + + I++ Y + G+ I T V+VY Q + +KY G+V +
Sbjct: 658 KVVHIGDKGQSIWIKDIQGISEHYQRRKGIIINETSVVVYAQLLTGQKYQISQNGEVHLE 717
Query: 877 RTFIRSTVTYAYQSAVLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCVIST- 934
+ + + + + YQ+ V ++ + KT+D++F F L + +YG G V +
Sbjct: 718 KQWSKQVLPFVYQTIVKDISAFDSRFSKIKTLDDLFPLRSTVFMLGSSYYGCSGEVQDSG 777
Query: 935 -VKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIF 993
V E I++ F + EP L L+ Q Y P Y +AS+L +S L+SRFTGSIF
Sbjct: 778 DVISEGR-IRVVFNIPWEPHLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIF 836
Query: 994 IIDSTE---EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQF 1050
I + G + N+GLN+KF++KNEEV G+T++ +W Y+ V L+ Y ++
Sbjct: 837 IGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKK--VGNEWTYSSAVEQLLAEYFERV 894
Query: 1051 PEVFGFLKDHSSDDIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDA 1107
PE+F F+ + +D++ DD++P + G ++V +IV+WLK P + C ++DA
Sbjct: 895 PELFSFVSKNGREDVFYEDDIWPGENENGAEKVQEIVTWLKTHPVSTLSRSSCDLQILDA 954
Query: 1108 KVVSLIEHAVDTCE--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRD 1165
+V IE V+ C+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+
Sbjct: 955 AIVEKIEEEVEKCKQRKSNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRE 1014
Query: 1166 CYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSY 1225
++VP+G RGTIIGI D +++V+FD+ F G+ IRCS +RGYR+P A+INLS+
Sbjct: 1015 NFSVPVGLRGTIIGIKGASREADVLFEVLFDEEFHGGLTIRCSPARGYRLPTSALINLSH 1074
Query: 1226 GER 1228
G R
Sbjct: 1075 GNR 1077
>gi|195345705|ref|XP_002039409.1| GM22742 [Drosophila sechellia]
gi|194134635|gb|EDW56151.1| GM22742 [Drosophila sechellia]
Length = 1585
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/1253 (39%), Positives = 707/1253 (56%), Gaps = 109/1253 (8%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P++LFF+A+DGVAPRAKMNQQR RRFRSA+EAE LE KA ++GE E RFDSNCITPG
Sbjct: 77 PQRLFFLAVDGVAPRAKMNQQRSRRFRSAREAEQLETKAAQRGEWREHE-RFDSNCITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL + LR F+K KI+TD LW+ VILSG E PGEGEHKIMDYIRY
Sbjct: 136 TVFMGRLQKGLRAFLKTKISTDPLWQRC---------SVILSGQEVPGEGEHKIMDYIRY 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
MK++PD++PN RHC+YGLDADLI+LGLCTHE +F +LREEVKF + + EET
Sbjct: 187 MKAQPDFDPNTRHCIYGLDADLIILGLCTHELHFVVLREEVKFGRNVKR-----TSVEET 241
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
+FFLLHL L+R+YLELEF L+ + + +IDDWVLMGFL+GNDFIP+LP LHI
Sbjct: 242 RFFLLHLGLLREYLELEFDALR---TVEHKLDVAQLIDDWVLMGFLVGNDFIPHLPCLHI 298
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
+ ALPLLY+ Y + PTL G INE G LNL+R + F++ L + E F+E +I+Y+
Sbjct: 299 SSNALPLLYRTYIRIYPTLGGNINENGKLNLRRLQIFMSALTEVELEHFKEHADEIKYMN 358
Query: 438 GKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWR 497
K +DV +S+ D DL ALI + YDD +EE +
Sbjct: 359 SKTDTFDTDVDEITESQNHDSDLGALINKSMMLYDDDSEEDCSDEAV------------- 405
Query: 498 TNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPH 557
EF +K ++Y K +++L + Y+ A+QW L YYY G SW WYYP
Sbjct: 406 --LLKEFENYKRNFYRNKFKRDP-QSDLLEELGHHYVNALQWVLDYYYRGVQSWDWYYPF 462
Query: 558 HYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILE 617
HY+P+ISD+K+ + + + +G PFLPFQQLLAVLPAAS +LLP Y +LM L +SP+ +
Sbjct: 463 HYSPFISDLKNIEQVEIAFHLGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPSSPLAD 522
Query: 618 YYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
+YP EF +DLNGKK DWEAVVLIPFIDE +L+ AM E L+ EER RN+HGPM VY Y
Sbjct: 523 FYPLEFESDLNGKKHDWEAVVLIPFIDERRLLNAMLPCEAQLSLEERERNQHGPMYVYKY 582
Query: 678 SNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDV---NLKLYVTHFP 734
S GT A+ + E + +I V+ L +C ++ K++ FP
Sbjct: 583 SPEAQGTMPECPPLKALPVLYCSEVAKWSHEIAVN---LPYSVCIELPNAARKVFFPGFP 639
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVP-SLKQVADQILGKTIFINYPHL 793
T++H+ F ++ N +VKVF+Q SRN++I++ K + +L+ VA Q LGK I I +PHL
Sbjct: 640 TMQHLPFDFELRNDRVKVFEQVSRNQNIVLKPRKSPLEDTLEAVASQYLGKVIHIGWPHL 699
Query: 794 IEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEV 853
++ V VAT+D R+ D A + F K++ + + T++G+ N +V
Sbjct: 700 VKAMVVRVATRDQRVDSDG--------IAPNDSRRFDSECKALQEHFITRMGIQFANYDV 751
Query: 854 LVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKTIDEIFYP 913
LVY + F +G + + ++ RS + Q V NL +S ++ E ++P
Sbjct: 752 LVYVRTFAGNSTEFHAKGDLVVRDSWSRSVTGHPAQGVVANLNVWEKSSKHILNVEHYFP 811
Query: 914 -GCQCFALSNPHYGSGGCVIS-TVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPS 971
G F +++P+YGS G V + N I++S VQ EP + LQ++ +YL +
Sbjct: 812 VGSSIFLITDPYYGSEGTVQDPRLAYTNGRIQVSIMVQPEPKVKAARQLQEERDRDYLST 871
Query: 972 YTVASKLSISPLLLSRFTGSIFIIDSTE----EGAKRHNIGLNIKFSRKNEEVVGFTRRD 1027
Y V L IS L R TG+++++ E +HNIGL +K+ R+NEE G+ R
Sbjct: 872 YQVCHLLKISGRALGRLTGTVWVVLGPRRQKMENVTKHNIGLQLKYPRQNEERAGYCCR- 930
Query: 1028 ETTKKWFYTEQVVTLIKNYMKQFPEVFGFLK-DHSSDDIYLRDDVFPHQ-GEQRVAQIVS 1085
+W+Y+ + L+ +Y +++P+V F + + DVFP G +RV + +
Sbjct: 931 -MNNQWYYSSLALDLMHDYCQRYPDVIAFFGISNDRAEFVFEQDVFPTAVGHRRVEDLAN 989
Query: 1086 WLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE-KQITLFVKPNKLYIPKPTLD 1144
W+++QPH K E CG+ V + V L+ AVD + K + L VKP+ L P TL
Sbjct: 990 WVRQQPHMKVERVSCGSKTVCRETVQLLIAAVDELRSLPVKHVKLQVKPHLLIKPNVTL- 1048
Query: 1145 KLCPDPDTK--FKLFDRVVNIRDCYTVPLGYRGTIIGI--------VQGETSY--DAMYD 1192
PD K +LFDRVV +R Y VP+G +GT+IGI V+ E + D Y+
Sbjct: 1049 ---PDVYRKRAVRLFDRVVIVRSIYMVPVGTKGTVIGINPVTDPNPVRFECVHVVDNFYE 1105
Query: 1193 VVFDKPFP-----HGVKIRCSESRGYRMPAQAMINLSYGERLCGNSNPHVKNINVMQSRG 1247
V+FDKP P HG+ +E R Y++P A++ + E +N N +
Sbjct: 1106 VLFDKPVPNCNDIHGI----AEDRVYKVPEIALVIIKTDE------EAEKQNDNALTV-- 1153
Query: 1248 ERNTNYAQVTRQPQRTTFYKENAPLVNSNLQVTSPYHVKVSRCNSQQSSVSQSPSSTMIS 1307
R+T Q +P R T + ++ + +T ++ ++ ++++ S
Sbjct: 1154 -RDTEPNQAQDEPVRATSSRYVTAAGSTWVPITMKTQIRDEFVKTRGDPIARTDSY---- 1208
Query: 1308 QQSSPFNVKPTEKTEPPPPHKL-NQVNTSSAPKEKPRTSEQN--QIKSNGNEQ 1357
+SSP + +P PP ++ N S P KP++S N Q +S+ +Q
Sbjct: 1209 -KSSP-------EPKPVPPEQITNWRERVSTPTTKPQSSPNNWRQNRSSSRQQ 1253
Score = 206 bits (525), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 113/129 (87%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE+ RE+ IPEFDNLYLDMNGI+HNCSHP+DN+ HF + E+QI
Sbjct: 1 MGVPKFFRYISERYPCLSELAREHSIPEFDNLYLDMNGIVHNCSHPDDNNIHFHLEEQQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FQ+IF+Y++ LF +I+P++LFF+A+DGVAPRAKMNQQR RRFRSA+EAE LE KA ++GE
Sbjct: 61 FQEIFNYVDKLFYLIKPQRLFFLAVDGVAPRAKMNQQRSRRFRSAREAEQLETKAAQRGE 120
Query: 121 RLPTEKRFD 129
E RFD
Sbjct: 121 WREHE-RFD 128
>gi|195398773|ref|XP_002057995.1| GJ15840 [Drosophila virilis]
gi|194150419|gb|EDW66103.1| GJ15840 [Drosophila virilis]
Length = 1656
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/1114 (40%), Positives = 654/1114 (58%), Gaps = 81/1114 (7%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+KLFF+A+DGVAPRAKMNQQR RRFRSA+EAE+LE KA ++GER E RFDSNCITPG
Sbjct: 77 PQKLFFLAVDGVAPRAKMNQQRSRRFRSAREAEMLEAKALQRGERREHE-RFDSNCITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL LR F++ KI+TD LW+ +ILSG ETPGEGEHKIMDYIRY
Sbjct: 136 TEFMARLQLGLRCFLRTKISTDPLWQKCR---------IILSGQETPGEGEHKIMDYIRY 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
MK++P+++PN RHCLYGLDADLI+LGLCTHE +F +LREEVKF + + EET
Sbjct: 187 MKAQPNFDPNTRHCLYGLDADLIILGLCTHELHFVVLREEVKFGRNVKR-----TSVEET 241
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
+FFLLHL L+R+YLELEF +L P + +IDDWVLMGF++GNDFIP+LP LHI
Sbjct: 242 RFFLLHLGLLREYLELEFHQLSTP---EQKLDVAQLIDDWVLMGFMVGNDFIPHLPCLHI 298
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
+ ALPLLYK Y + L G INE G LNL+R E+F+ L+ + + F E D++Y+
Sbjct: 299 SSNALPLLYKTYIRIYRQLGGNINEHGKLNLERLEQFMHALSEVELQLFEEHSDDLKYMN 358
Query: 438 GKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEW- 496
K ++ D D+A L + D Y D +++ N + Y D DE++
Sbjct: 359 AK-------------TEAFDVDVAELKNGSFDGYSDDLAALID--NSMKLYEGDSDEDFG 403
Query: 497 --RTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWY 554
+T+ SEF +K +YY K ++ ++++ + Y+ A+QW L YYY G SW WY
Sbjct: 404 DEQTSLRSEFQNYKRNYYRNKFK-NEMHSDLIAELGYHYVTAMQWVLDYYYRGVQSWDWY 462
Query: 555 YPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSP 614
YP+HYAP+ISD+ + + + +++G+PFLPFQQLLAVLPAAS LLP Y +LM NSP
Sbjct: 463 YPYHYAPFISDLTNIKDIRINFKLGKPFLPFQQLLAVLPAASVSLLPAAYHDLMLNPNSP 522
Query: 615 ILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLV 674
+ E+YP EF +DLNGKK DWEAVVLIPFI+E +L++AM A E LL EER+RNRHGPM
Sbjct: 523 LAEFYPTEFESDLNGKKHDWEAVVLIPFIEEDRLLRAMSACEPLLNSEERNRNRHGPMFQ 582
Query: 675 YTYSNVNLG--TALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTH 732
Y YS + G ALAP ++ E + +I ++ + + ++
Sbjct: 583 YDYSAQSQGPMKALAP--LKSLQHVFCTELARWAHEIAINTPRTVCVELPNAARHVFFPG 640
Query: 733 FPTLKHVQFTHKIENAKVKVFQQPSRNESIIIV-QDKVQVPSLKQVADQILGKTIFINYP 791
FPT+KH++F + +VKVF+Q SRN+S++++ + + Q +L VA Q LG+ + I +P
Sbjct: 641 FPTMKHLEFNFDLRYDRVKVFEQASRNQSMVLLPKRRHQQDTLTSVASQYLGQVVHIGWP 700
Query: 792 HLIEIRVQAVATKDSRISFD---KNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDI 848
HLI+ +V++VAT+D + D N FE K +++ F +++G+
Sbjct: 701 HLIKAKVESVATRDQIVDKDGVRANESRYFESDCKALEEHFT-----------SRMGIKF 749
Query: 849 GNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESL--EYKT 906
N VLVY + FG RG + Q ++ S Y Q V ++ R++L +++
Sbjct: 750 ANYYVLVYIRTYAGSSVEFGQRGSIFMQDSWNSSVTPYPAQGVVSDI-TVRDNLHVQFRK 808
Query: 907 IDEIFYPGCQCFALSNPHYGSGGCVIS-TVKEENSFIKLSFKVQQEPDLSDLVHLQDDTV 965
I+++F G F + P+ GS G V+ + ++++ +V EP L LQ+
Sbjct: 809 IEQLFPVGSTVFFIGEPYAGSEGTVLDPMLVYSCGRVQVNLRVGPEPQLLAARQLQEQRD 868
Query: 966 YNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE----EGAKRHNIGLNIKFSRKNEEVV 1021
+Y+ SY V +L I+ L R TG+++++ E +HNIGL +K+ R NEE
Sbjct: 869 RDYMNSYKVCRELDITSKCLGRLTGTVWVVLGPRRERMENVSKHNIGLQLKYPRLNEERA 928
Query: 1022 GFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYL-RDDVFPHQ-GEQR 1079
G+ RR +WFY+ + L+ +Y ++P + + S ++ +D+FP G+
Sbjct: 929 GYCRR--LNNQWFYSSLAIELMSSYCDRYPSIVDYFSSSSDRGEFIYEEDIFPDAIGQHH 986
Query: 1080 VAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE-KQITLFVKPNKLYI 1138
+ + +W+++QPH K + CG+ V + V L+ A D + K + L VKP+ L
Sbjct: 987 IEDVANWVRQQPHMKVDRITCGSRTVCKETVELLLAAADELRLLPVKNVKLQVKPHLLIK 1046
Query: 1139 PKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI----------VQGETSYD 1188
P TL + P +LFDRVV +R Y VP+G GT+IGI ++ S +
Sbjct: 1047 PNVTLPDVYRTPGA-VRLFDRVVVVRTIYMVPVGITGTVIGIHPVSDPNPVRLECLNSVE 1105
Query: 1189 AMYDVVFDKPFPHGVKIR-CSESRGYRMPAQAMI 1221
+++FD+ + I ++ R Y++P A++
Sbjct: 1106 TFCELLFDRCVANCGDIHGIADERVYKVPESALV 1139
Score = 213 bits (541), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/129 (74%), Positives = 114/129 (88%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE+ RE+ IPEFDNLYLDMNGI+HNCSHP+DN+ HF + E QI
Sbjct: 1 MGVPKFFRYISERYPCLSELAREHSIPEFDNLYLDMNGIVHNCSHPDDNNIHFHLEEPQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FQDI++YI+ LF +I+P+KLFF+A+DGVAPRAKMNQQR RRFRSA+EAE+LE KA ++GE
Sbjct: 61 FQDIYNYIDKLFYLIKPQKLFFLAVDGVAPRAKMNQQRSRRFRSAREAEMLEAKALQRGE 120
Query: 121 RLPTEKRFD 129
R E RFD
Sbjct: 121 RREHE-RFD 128
>gi|24643245|ref|NP_523408.2| pacman, isoform A [Drosophila melanogaster]
gi|7293586|gb|AAF48958.1| pacman, isoform A [Drosophila melanogaster]
gi|15291661|gb|AAK93099.1| LD22664p [Drosophila melanogaster]
Length = 1612
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/1122 (41%), Positives = 648/1122 (57%), Gaps = 87/1122 (7%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P++LFF+++DGVAPRAKMNQQR RRFR+A+EAE E KA ++GE L +RFDSNCITPG
Sbjct: 77 PQRLFFLSVDGVAPRAKMNQQRSRRFRTAREAEQQEAKAAQRGE-LREHERFDSNCITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL + LR F+K KI+TD LW+ VILSG E PGEGEHKIMDYIRY
Sbjct: 136 TEFMVRLQEGLRAFLKTKISTDPLWQR---------CTVILSGQEAPGEGEHKIMDYIRY 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
MK++PDY+PN RHCLYGLDADLI+LGLCTHE +F +LREEVKF + + EET
Sbjct: 187 MKTQPDYDPNTRHCLYGLDADLIILGLCTHELHFVVLREEVKFGRNVKR-----TSVEET 241
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
+FFLLHL L+R+YLELEF L+ I +IDDWVLMGFL+GNDFIP+LP LHI
Sbjct: 242 RFFLLHLGLLREYLELEFDALRTD---EHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHI 298
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
+ ALPLLY+ Y + PTL G INE G LNL+R + F++ L + + F+E D++Y+
Sbjct: 299 SSNALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHADDLKYMN 358
Query: 438 GKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWR 497
K DV +S+ +D DL ALI + YDD +EE + N
Sbjct: 359 NKSEAFDMDVGEITESQNLDSDLGALINKSMLLYDDDSEEDCSDEN-------------- 404
Query: 498 TNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPH 557
EF +K ++Y K +E++ + Y+ A+QW L YYY G SW WYYP
Sbjct: 405 AVLLKEFQNYKRNFYRNKFK-RDPNDELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPF 463
Query: 558 HYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILE 617
HY P+ISD+K+ + + + MG PFLPFQQLLAVLPAAS +LLP Y +LM L SP+ E
Sbjct: 464 HYTPFISDLKNIEQVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAE 523
Query: 618 YYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
+YP EF +DLNGKK DWEAVVLIPFIDE +L+ AM E L+ EER RNRHGPM VY Y
Sbjct: 524 FYPLEFESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERNRHGPMYVYKY 583
Query: 678 SNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDV---NLKLYVTHFP 734
S V G A A+ + E + +I V+ L +C ++ ++ FP
Sbjct: 584 STVAQGPMPAYPPLRALPVLYCTEVAKWSHEIAVN---LPYSVCIELPNAARTVFFPGFP 640
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVP-SLKQVADQILGKTIFINYPHL 793
T++H+ F ++ N +VKVF+Q SRN++I++ K Q+ +L VA Q LGK I + +PHL
Sbjct: 641 TMQHLPFDFELRNDRVKVFEQVSRNQNIVLKPRKRQLEDTLTAVASQYLGKVIHVGWPHL 700
Query: 794 IEIRVQAVATKDSRISFDK---NSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGN 850
++ V VAT+D R+ + N F+ K +Q+ F ++G+ N
Sbjct: 701 VKAIVVRVATRDQRVDSEGITLNDSRRFDSECKALQEHF-----------INRMGIQFAN 749
Query: 851 TEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQ-QARESLEYKTIDE 909
+VLVY + F +G + + ++ S Y Q V +L R + ++
Sbjct: 750 YDVLVYVRTFAGNSTEFRDKGALMVRDSWSSSVTGYPAQGVVADLTVWERMRKNFLNVEH 809
Query: 910 IFYPGCQCFALSNPHYGSGGCVIS-TVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNY 968
F G F +++P+YGS G V + N I++S V+ EP ++ LQ++ +Y
Sbjct: 810 YFPVGSTIFLITDPYYGSEGTVQDPRLAYTNGRIQVSIMVRPEPKVNAARQLQEERDRDY 869
Query: 969 LPSYTVASKLSISPLLLSRFTGSIFIIDSTE----EGAKRHNIGLNIKFSRKNEEVVGFT 1024
L ++ V + L IS L R +G+++++ E +HNIGL +K+ R+NEE G+
Sbjct: 870 LSTFQVCNLLRISGRTLGRLSGTVWVVLGPRRQKMENVTKHNIGLQLKYPRQNEERAGYC 929
Query: 1025 RRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKD-HSSDDIYLRDDVFPHQ-GEQRVAQ 1082
R T +W+Y+ V L++NY +++P+V F D + + DVFP+ G +RV +
Sbjct: 930 FR--TNNQWYYSSLAVDLMRNYCQRYPDVIDFFGDSNDRAEFVFEQDVFPNAVGHRRVEE 987
Query: 1083 IVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE-KQITLFVKPNKLYIPKP 1141
+ +W+++QPH K E CG+ V + + L+ AVD + K + L VKP+ L P
Sbjct: 988 LANWVRQQPHMKVERISCGSKTVCRETIELLIAAVDDLRSLPVKHVKLQVKPHLLIKPNV 1047
Query: 1142 TLDKLCPDPDT-----KFKLFDRVVNIRDCYTVPLGYRGTIIGI----------VQGETS 1186
TL PD +LFDRVV +R Y VP+G +GT+IGI ++ +
Sbjct: 1048 TL------PDVYRSKRPVRLFDRVVIVRTIYMVPVGTKGTVIGIHPVTDPNPVRLECVHA 1101
Query: 1187 YDAMYDVVFDKPFPHGVKIR-CSESRGYRMPAQAMINLSYGE 1227
D V+FD P P+ I +E R Y++P A++ + E
Sbjct: 1102 VDTFCKVLFDSPVPNCNNIHGIAEDRVYKVPEIALVIIKTDE 1143
Score = 202 bits (514), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/129 (69%), Positives = 113/129 (87%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE+ RE+ IPEFDNLYLDMNGI+HNCSHP+DN+ HF + E+QI
Sbjct: 1 MGVPKFFRYISERYPCLSELAREHCIPEFDNLYLDMNGIVHNCSHPDDNNIHFHLEEEQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FQ+IF+Y++ LF +I+P++LFF+++DGVAPRAKMNQQR RRFR+A+EAE E KA ++GE
Sbjct: 61 FQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSRRFRTAREAEQQEAKAAQRGE 120
Query: 121 RLPTEKRFD 129
L +RFD
Sbjct: 121 -LREHERFD 128
>gi|281361106|ref|NP_001162796.1| pacman, isoform B [Drosophila melanogaster]
gi|272506169|gb|ACZ95330.1| pacman, isoform B [Drosophila melanogaster]
Length = 1613
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/1122 (41%), Positives = 648/1122 (57%), Gaps = 87/1122 (7%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P++LFF+++DGVAPRAKMNQQR RRFR+A+EAE E KA ++GE L +RFDSNCITPG
Sbjct: 77 PQRLFFLSVDGVAPRAKMNQQRSRRFRTAREAEQQEAKAAQRGE-LREHERFDSNCITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL + LR F+K KI+TD LW+ VILSG E PGEGEHKIMDYIRY
Sbjct: 136 TEFMVRLQEGLRAFLKTKISTDPLWQR---------CTVILSGQEAPGEGEHKIMDYIRY 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
MK++PDY+PN RHCLYGLDADLI+LGLCTHE +F +LREEVKF + + EET
Sbjct: 187 MKTQPDYDPNTRHCLYGLDADLIILGLCTHELHFVVLREEVKFGRNVKR-----TSVEET 241
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
+FFLLHL L+R+YLELEF L+ I +IDDWVLMGFL+GNDFIP+LP LHI
Sbjct: 242 RFFLLHLGLLREYLELEFDALRTD---EHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHI 298
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
+ ALPLLY+ Y + PTL G INE G LNL+R + F++ L + + F+E D++Y+
Sbjct: 299 SSNALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHADDLKYMN 358
Query: 438 GKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWR 497
K DV +S+ +D DL ALI + YDD +EE + N
Sbjct: 359 NKSEAFDMDVGEITESQNLDSDLGALINKSMLLYDDDSEEDCSDEN-------------- 404
Query: 498 TNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPH 557
EF +K ++Y K +E++ + Y+ A+QW L YYY G SW WYYP
Sbjct: 405 AVLLKEFQNYKRNFYRNKFK-RDPNDELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPF 463
Query: 558 HYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILE 617
HY P+ISD+K+ + + + MG PFLPFQQLLAVLPAAS +LLP Y +LM L SP+ E
Sbjct: 464 HYTPFISDLKNIEQVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAE 523
Query: 618 YYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
+YP EF +DLNGKK DWEAVVLIPFIDE +L+ AM E L+ EER RNRHGPM VY Y
Sbjct: 524 FYPLEFESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERNRHGPMYVYKY 583
Query: 678 SNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDV---NLKLYVTHFP 734
S V G A A+ + E + +I V+ L +C ++ ++ FP
Sbjct: 584 STVAQGPMPAYPPLRALPVLYCTEVAKWSHEIAVN---LPYSVCIELPNAARTVFFPGFP 640
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVP-SLKQVADQILGKTIFINYPHL 793
T++H+ F ++ N +VKVF+Q SRN++I++ K Q+ +L VA Q LGK I + +PHL
Sbjct: 641 TMQHLPFDFELRNDRVKVFEQVSRNQNIVLKPRKRQLEDTLTAVASQYLGKVIHVGWPHL 700
Query: 794 IEIRVQAVATKDSRISFDK---NSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGN 850
++ V VAT+D R+ + N F+ K +Q+ F ++G+ N
Sbjct: 701 VKAIVVRVATRDQRVDSEGITLNDSRRFDSECKALQEHF-----------INRMGIQFAN 749
Query: 851 TEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQ-QARESLEYKTIDE 909
+VLVY + F +G + + ++ S Y Q V +L R + ++
Sbjct: 750 YDVLVYVRTFAGNSTEFRDKGALMVRDSWSSSVTGYPAQGVVADLTVWERMRKNFLNVEH 809
Query: 910 IFYPGCQCFALSNPHYGSGGCVIS-TVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNY 968
F G F +++P+YGS G V + N I++S V+ EP ++ LQ++ +Y
Sbjct: 810 YFPVGSTIFLITDPYYGSEGTVQDPRLAYTNGRIQVSIMVRPEPKVNAARQLQEERDRDY 869
Query: 969 LPSYTVASKLSISPLLLSRFTGSIFIIDSTE----EGAKRHNIGLNIKFSRKNEEVVGFT 1024
L ++ V + L IS L R +G+++++ E +HNIGL +K+ R+NEE G+
Sbjct: 870 LSTFQVCNLLRISGRTLGRLSGTVWVVLGPRRQKMENVTKHNIGLQLKYPRQNEERAGYC 929
Query: 1025 RRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKD-HSSDDIYLRDDVFPHQ-GEQRVAQ 1082
R T +W+Y+ V L++NY +++P+V F D + + DVFP+ G +RV +
Sbjct: 930 FR--TNNQWYYSSLAVDLMRNYCQRYPDVIDFFGDSNDRAEFVFEQDVFPNAVGHRRVEE 987
Query: 1083 IVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE-KQITLFVKPNKLYIPKP 1141
+ +W+++QPH K E CG+ V + + L+ AVD + K + L VKP+ L P
Sbjct: 988 LANWVRQQPHMKVERISCGSKTVCRETIELLIAAVDDLRSLPVKHVKLQVKPHLLIKPNV 1047
Query: 1142 TLDKLCPDPDT-----KFKLFDRVVNIRDCYTVPLGYRGTIIGI----------VQGETS 1186
TL PD +LFDRVV +R Y VP+G +GT+IGI ++ +
Sbjct: 1048 TL------PDVYRSKRPVRLFDRVVIVRTIYMVPVGTKGTVIGIHPVTDPNPVRLECVHA 1101
Query: 1187 YDAMYDVVFDKPFPHGVKIR-CSESRGYRMPAQAMINLSYGE 1227
D V+FD P P+ I +E R Y++P A++ + E
Sbjct: 1102 VDTFCKVLFDSPVPNCNNIHGIAEDRVYKVPEIALVIIKTDE 1143
Score = 202 bits (514), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/129 (69%), Positives = 113/129 (87%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE+ RE+ IPEFDNLYLDMNGI+HNCSHP+DN+ HF + E+QI
Sbjct: 1 MGVPKFFRYISERYPCLSELAREHCIPEFDNLYLDMNGIVHNCSHPDDNNIHFHLEEEQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FQ+IF+Y++ LF +I+P++LFF+++DGVAPRAKMNQQR RRFR+A+EAE E KA ++GE
Sbjct: 61 FQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSRRFRTAREAEQQEAKAAQRGE 120
Query: 121 RLPTEKRFD 129
L +RFD
Sbjct: 121 -LREHERFD 128
>gi|357624452|gb|EHJ75231.1| putative 5-3 exoribonuclease 1 [Danaus plexippus]
Length = 730
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/686 (58%), Positives = 500/686 (72%), Gaps = 44/686 (6%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT 185
F +I++ F PKKLFFMAIDGVAPRAKMNQQRGRRFRSA+EAE LE+ AKEKGE LPT
Sbjct: 65 FHYISILFQIIKPKKLFFMAIDGVAPRAKMNQQRGRRFRSAREAEKLEETAKEKGEALPT 124
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPG 245
EKRFDSNCITPGT FM RLH+QL+YF+K KI+TD LW V VILSGHETPG
Sbjct: 125 EKRFDSNCITPGTVFMARLHEQLKYFIKEKISTDPLWSK---------VKVILSGHETPG 175
Query: 246 EGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN 305
EGEHKIMDYIR+ +S+PDY+P+ RHCLYGLDADLIMLG+CTHEP+F+LLREEVKF +
Sbjct: 176 EGEHKIMDYIRWARSQPDYDPSTRHCLYGLDADLIMLGVCTHEPHFALLREEVKFGKTTQ 235
Query: 306 KGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIG 365
+ S PEET F+LLHLSL+R+YLE EF +K+ L FP+ IENIIDDWVLMGFL+G
Sbjct: 236 RATS----PEETNFYLLHLSLLREYLEQEFISIKDN--LPFPYDIENIIDDWVLMGFLVG 289
Query: 366 NDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQ 425
NDFIPNLP++HI N ALPLLYK Y VLPTLDGYINE G LNL RFE F+ +LA D E+
Sbjct: 290 NDFIPNLPNMHISNDALPLLYKTYMTVLPTLDGYINESGDLNLGRFEVFMQELAKIDKEK 349
Query: 426 FREKYADIQYLEGKMGKK----------------FSDVFHKEKSKEMDPDLAALIKATDD 469
F++ YAD++Y E K G++ F+ K+ + D +L ALI AT +
Sbjct: 350 FQDTYADLKYFEAKTGRRPNANERRDYKPNNDDTFNVNLDDIKANKPDDELQALIDATQE 409
Query: 470 DYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQ 529
+ D + +E Y DEE N EF HK DYY KLDY+KVT+EVL DQ
Sbjct: 410 MFMDDMKS-------DEDYEETSDEE--ANMEMEFILHKKDYYMNKLDYSKVTDEVLSDQ 460
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
AECY+RAIQWNL YYY GC SW WYYPHHYAPYISDIKDF ++N+++E+GEPF PF+QLL
Sbjct: 461 AECYVRAIQWNLWYYYRGCPSWCWYYPHHYAPYISDIKDFGNMNMEFELGEPFKPFEQLL 520
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
AVLP ASK LLP P+ +LMT E+SPI+ YYP F TDLNGKK DWEAVVL+PFIDE L+
Sbjct: 521 AVLPGASKHLLPTPFHDLMTDEDSPIVHYYPVSFETDLNGKKNDWEAVVLLPFIDETNLL 580
Query: 650 KAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDI 709
AM LT+EE RN HGPMLVY ++ +LG ++P+YFP+I ENHAVEK ++R ++
Sbjct: 581 SAMSPCYQRLTEEELKRNSHGPMLVYNWTADSLGPIISPEYFPSIKENHAVEKAVWRHEL 640
Query: 710 YVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESII--IVQD 767
V + L++G+ D + + FPT++H+++ I+ KVKVF QPSRNE+++ IV
Sbjct: 641 DVPLHLLKRGMLPDADKDVLYPGFPTMRHLKYKTSIKKCKVKVFDQPSRNENMMLQIVPT 700
Query: 768 KVQVPSLKQVADQILGKTIFINYPHL 793
P+L+++A +ILG+ +++ +PHL
Sbjct: 701 ATTDPALEELAAKILGQVVWVGWPHL 726
Score = 241 bits (615), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 111/145 (76%), Positives = 128/145 (88%), Gaps = 4/145 (2%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRY SERYPCL+E+V++YQIP+FDN+YLDMNGIIHNCSHP+D++PHFRITE++I
Sbjct: 1 MGVPKFFRYTSERYPCLNELVKQYQIPDFDNMYLDMNGIIHNCSHPDDSNPHFRITEEKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F+DIFHYI ILF++I+PKKLFFMAIDGVAPRAKMNQQRGRRFRSA+EAE LE+ AKEKGE
Sbjct: 61 FKDIFHYISILFQIIKPKKLFFMAIDGVAPRAKMNQQRGRRFRSAREAEKLEETAKEKGE 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMA 145
LPTEKRFD C FMA
Sbjct: 121 ALPTEKRFD----SNCITPGTVFMA 141
>gi|195457130|ref|XP_002075439.1| GK17975 [Drosophila willistoni]
gi|194171524|gb|EDW86425.1| GK17975 [Drosophila willistoni]
Length = 1638
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/1135 (40%), Positives = 671/1135 (59%), Gaps = 83/1135 (7%)
Query: 124 TEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERL 183
EK F I P+KLFF+++DGVAPRAKMNQQR RRFR+A+EAE LE KA ++GE+
Sbjct: 68 VEKLFHLIK-----PQKLFFLSVDGVAPRAKMNQQRSRRFRTAREAEQLETKASQRGEKR 122
Query: 184 PTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHET 243
E RFDSNCITPGT FM RL LR F++ KI+ D LW+ VILSG ET
Sbjct: 123 QHE-RFDSNCITPGTVFMERLQLALRSFLRTKISLDPLWQKCR---------VILSGEET 172
Query: 244 PGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTK 303
PGEGEHKIMDYIRY+KS+P+++PN RHCLYGLDADLI+LGLCTHE +F +LREEVKF
Sbjct: 173 PGEGEHKIMDYIRYLKSQPNFDPNTRHCLYGLDADLIILGLCTHELHFVVLREEVKFGRN 232
Query: 304 SNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFL 363
+ T EET+F+LLHL L+R+YLELEF +L + +IDDWVLMGF+
Sbjct: 233 VKRA-----TLEETRFYLLHLGLLREYLELEFNEL---STKEKKLDVAQLIDDWVLMGFM 284
Query: 364 IGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDF 423
+GNDFIPNLP LHI + ALPLLYK Y +V P L G INE G LNL+R + F+T L+ +
Sbjct: 285 VGNDFIPNLPCLHISSNALPLLYKTYIQVYPQLGGNINERGKLNLRRLQIFMTALSEVEL 344
Query: 424 EQFREKYADIQYLEGKMGKKFSDVFHKEKS----KEMDPDLAALI----KATDDDYDDGT 475
+QF + + D++Y+ K DV + + + + DL ALI KA+ + D
Sbjct: 345 QQFEDHFDDLKYMNAKTEAFDVDVSEIQSASANGESFNSDLVALIDNSMKASSEI--DFI 402
Query: 476 EEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIR 535
+ +Y + +E ++ D +E ++ EF +K +YY K ++ +++ + YI
Sbjct: 403 ITLYDYDSDDEEHFEDLTDE-ASSLRHEFQNYKRNYYRNKFK-REMKGDLVEELTHHYIT 460
Query: 536 AIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAA 595
A+QW L YYY G SW WYYP HYAP+ISD+K+ ++ + +++G PFLPFQQLLAVLPAA
Sbjct: 461 ALQWILDYYYRGVQSWDWYYPFHYAPFISDLKNIENVKIHFQLGRPFLPFQQLLAVLPAA 520
Query: 596 SKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
S +LLP Y +LM +S + E+YP EF +DLNGKK DWEAVVLIPFIDE +L++AM
Sbjct: 521 SSKLLPIAYHDLMLNPDSALAEFYPTEFESDLNGKKHDWEAVVLIPFIDERRLLEAMRPC 580
Query: 656 EHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNK 715
E+ LT ERSRN+HGPM Y +S ++G+ + A+ E + +I ++
Sbjct: 581 ENCLTTAERSRNQHGPMYQYDFSEQSVGSMPSLGPIKALQHVFCTETARWAKEIALN--- 637
Query: 716 LRKGLCQDVNLK---LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVP 772
L + +C ++ K ++ FPT+KH+ F ++ N +VKVF+Q SRN++++++ K +
Sbjct: 638 LPESVCVELPNKARHVFFPGFPTMKHLPFNFELRNDRVKVFEQVSRNQNMVLMPLKRTLE 697
Query: 773 -SLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQL 831
+L VA Q L + + I +PHLI+ +V VAT+D R+ D+N +A D + F
Sbjct: 698 DTLTAVAGQYLEQVVHIGWPHLIKAKVVRVATRDERV--DENG-----LSANDSR-RFDS 749
Query: 832 SKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSA 891
KS+ + + T++G+ N +VLVY + FG V + + + Y Q
Sbjct: 750 EGKSLQEHFSTRMGIKFDNYDVLVYVRTYAGSSVEFGKNCSVYTKDAWSSTVTGYPAQGL 809
Query: 892 VLNLQQARESL--EYKTIDEIFYPGCQCFALSNPHYGSGGCVIS-TVKEENSFIKLSFKV 948
V NL E++ +++ I+E+F G Q F + NP+YGS G V+ + ++++ +V
Sbjct: 810 VANL-AVHENMKNQFRKIEELFPVGSQVFFIGNPYYGSEGTVLDPLLVYSCGRVQVNIRV 868
Query: 949 QQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFII----DSTEEGAKR 1004
EPDL LQ++ +Y+ SY L+I+ L R TG+++++ E +
Sbjct: 869 HPEPDLQAARLLQEERENDYINSYEACRYLNINSKALGRLTGTVWVVLGPRREKMENVAK 928
Query: 1005 HNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLK-DHSSD 1063
HNIGL +K+ R+NEE G+ +R +WF++ + L++ Y +P V + + +
Sbjct: 929 HNIGLQLKYPRQNEERAGYCQR--LNNQWFFSTLALELMQTYCDLYPNVVAYFSIANDRN 986
Query: 1064 DIYLRDDVFPHQ-GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEK 1122
+ +D++P G+ + + +W+++QPH K E CG+ V + V L+ VD
Sbjct: 987 EFIYEEDIYPDAVGQHNIEDLANWIRQQPHMKVERNTCGSKTVCKETVELLLTTVDELRS 1046
Query: 1123 VE-KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI- 1180
+ K + L VKP+ L P TL ++ T +LFDRV+ +R Y VPLG +GT+IGI
Sbjct: 1047 LPVKDVKLQVKPHLLIKPNVTLPEVYRARRT-VRLFDRVIVVRTIYMVPLGAKGTVIGIH 1105
Query: 1181 ---------VQGETSYDAMYDVVFDKPFP-----HGVKIRCSESRGYRMPAQAMI 1221
++ S + D++FDK P HG+ +E R YR+P A++
Sbjct: 1106 LVSDPNPVRLECVNSVETFCDILFDKTVPNCNDIHGI----AEERVYRVPESALV 1156
Score = 207 bits (526), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 112/129 (86%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE+ RE+ IPEFDNLYLDMNGI+HNCSHP+D + HF + E QI
Sbjct: 1 MGVPKFFRYISERYPCLSELAREHCIPEFDNLYLDMNGIVHNCSHPDDANIHFHLEEDQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FQDIF+Y+E LF +I+P+KLFF+++DGVAPRAKMNQQR RRFR+A+EAE LE KA ++GE
Sbjct: 61 FQDIFNYVEKLFHLIKPQKLFFLSVDGVAPRAKMNQQRSRRFRTAREAEQLETKASQRGE 120
Query: 121 RLPTEKRFD 129
+ E RFD
Sbjct: 121 KRQHE-RFD 128
>gi|198471055|ref|XP_001355485.2| GA17195 [Drosophila pseudoobscura pseudoobscura]
gi|198145746|gb|EAL32544.2| GA17195 [Drosophila pseudoobscura pseudoobscura]
Length = 1533
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/1124 (40%), Positives = 651/1124 (57%), Gaps = 89/1124 (7%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+KLFF+A+DGVAPRAKMNQQR RRFRSA+EAE+LE KA ++GER E RFDSNCITPG
Sbjct: 77 PQKLFFLAVDGVAPRAKMNQQRSRRFRSAREAEMLEAKALQRGERREHE-RFDSNCITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL Q LR F+K KI+TD LW+ VILSG ETPGEGEHKIMDYIRY
Sbjct: 136 TDFMERLQQGLRCFLKTKISTDPLWQKC---------SVILSGQETPGEGEHKIMDYIRY 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
MK++P+++PN RHCLYGLDADLI+LGLCTHE +F +LREEVKF + + EET
Sbjct: 187 MKAQPNFDPNTRHCLYGLDADLIILGLCTHELHFVVLREEVKFGRNVKRA-----SVEET 241
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
+FFLLHL L+R+YLELEF +L + +IDDWVLMGF++GNDFIP+LP LHI
Sbjct: 242 RFFLLHLGLLREYLELEFHQLN---TAQHKLDVAQLIDDWVLMGFMVGNDFIPHLPCLHI 298
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
+ ALPLLYK Y + +L G INE G LNL+R + F+T L+ + EQ++E D++Y
Sbjct: 299 SSNALPLLYKTYIRIYHSLGGNINEHGKLNLQRLQIFMTALSEVELEQYKEHADDLKYAN 358
Query: 438 GKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWR 497
G DV + SK+ D DL ALI + Y+D ++E L+
Sbjct: 359 GNTEAFDIDVGDIDSSKDYDSDLKALIDDSTQLYNDDSDEDLSDEE-------------- 404
Query: 498 TNFFSEFGQHKTDYYHYKLDYA-KVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYP 556
+F +K +YY K + + + N+++ + Y+ A+QW L YYY G SW WYYP
Sbjct: 405 AGVLKDFQNYKRNYYRNKFNLSSRPPNQLIEELGHHYVTALQWILDYYYRGVQSWDWYYP 464
Query: 557 HHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPIL 616
HYAP+ISD+ + + + +K+++G PFLPF+QLL VLPAAS +LLP Y +LM SP+
Sbjct: 465 FHYAPFISDLNNIATVQIKFQLGTPFLPFEQLLGVLPAASFKLLPNAYHDLMLKPTSPLA 524
Query: 617 EYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
E+YP +F +DLNGKK DWEAVVLIPFIDE L+ M E L+ ER+RNRHGPM Y
Sbjct: 525 EFYPTDFKSDLNGKKHDWEAVVLIPFIDECLLLSVMRPCEAHLSTAERARNRHGPMYQYD 584
Query: 677 YSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDV---NLKLYVTHF 733
YS ++G+ A A+ + E + +I ++ L +C ++ ++ F
Sbjct: 585 YSPEDVGSMPALPPLKALQHVNCTEVARWAGEIALN---LPHSVCVEMPNAARHVFFPGF 641
Query: 734 PTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVP-SLKQVADQILGKTIFINYPH 792
PT+KH+ F ++ + +VKVF+Q SRN++++++ K SL+ VA + L + + I +PH
Sbjct: 642 PTMKHLAFNFELRHGRVKVFEQVSRNQNMVLMPRKQATEDSLEAVAARYLEQVVHIGWPH 701
Query: 793 LIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTE 852
LI +V VAT+D I D S R F K++ + + T++G+ N E
Sbjct: 702 LIMAKVVKVATRDQCIDKDGRSSNESRR--------FDAECKALQEHFSTRMGIQFENYE 753
Query: 853 VLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARE-SLEYKTIDEIF 911
VLVY + FG +G V + + S Y Q V L + ++ I+++F
Sbjct: 754 VLVYARTYAGSSVDFGAKGTVHMKDAWSSSITEYPAQGVVGELSVKKNMRQQFSKIEQLF 813
Query: 912 YPGCQCFALSNPHYGSGGCVIS-TVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLP 970
G F + +P+YGS G V+ + I++ +V EP+L + Q+D +Y+
Sbjct: 814 PAGSLVFFIGSPYYGSEGTVLDPLLVYSCGRIQVCIRVHPEPNLDEARLEQEDRDKDYMN 873
Query: 971 SYTVASKLSISPLLLSRFTGSIFII----DSTEEGAKRHNIGLNIKFSRKNEEVVGFTRR 1026
++ V +L+I+ L R TG+ +++ E +HNIGL +KF R+NEE G+ RR
Sbjct: 874 TFDVCRQLNINGRALGRLTGTFWVVLGPRREKMENVAKHNIGLQLKFPRQNEERAGYCRR 933
Query: 1027 DETTKKWFYTEQVVTLIKNYMKQFPEVFG-FLKDHSSDDIYLRDDVFPHQ-GEQRVAQIV 1084
+WFY+ V L+ Y ++FPEV F + ++ + D++P G+ + +
Sbjct: 934 --LNNQWFYSSLAVELMHMYCERFPEVVSYFAVSNDRNEYFFEQDIYPDAVGQHHIEDLA 991
Query: 1085 SWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE-KQITLFVKPNKLYIPKPTL 1143
+W+++QPH K + CG+ V + V L+ AV+ + K + L VKP+ L P TL
Sbjct: 992 NWVRQQPHMKVDRISCGSKTVCKETVELLMGAVEELRSMPVKDVKLQVKPHLLIKPNVTL 1051
Query: 1144 DKLCPDPDT-----KFKLFDRVVNIRDCYTVPLGYRGTIIGI----------VQGETSYD 1188
PD +LFDRVV +R Y VP+G +GT+IG+ ++ + D
Sbjct: 1052 ------PDVYKSRRPVRLFDRVVIVRTIYMVPVGIKGTVIGVHPVTDPNPVRLECVHAVD 1105
Query: 1189 AMYDVVFDKPFP-----HGVKIRCSESRGYRMPAQAMINLSYGE 1227
+V+FDK P HG+ +E R Y++P A++ + E
Sbjct: 1106 TFCEVLFDKAVPNCNDIHGI----AEDRVYKIPENALVVICLNE 1145
Score = 213 bits (542), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 96/129 (74%), Positives = 115/129 (89%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE+ RE+ IPEFDNLYLDMNGI+HNCSHP+DN+ HF + E+QI
Sbjct: 1 MGVPKFFRYISERYPCLSELAREHSIPEFDNLYLDMNGIVHNCSHPDDNNIHFHLEEQQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FQDIF+Y++ LF +I+P+KLFF+A+DGVAPRAKMNQQR RRFRSA+EAE+LE KA ++GE
Sbjct: 61 FQDIFNYVDKLFYLIKPQKLFFLAVDGVAPRAKMNQQRSRRFRSAREAEMLEAKALQRGE 120
Query: 121 RLPTEKRFD 129
R E RFD
Sbjct: 121 RREHE-RFD 128
>gi|326327749|pdb|2Y35|A Chain A, Crystal Structure Of Xrn1-Substrate Complex
Length = 1140
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/1119 (41%), Positives = 647/1119 (57%), Gaps = 93/1119 (8%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P++LFF+++DGVAPRAKMNQQR RRFR+A+EAE E KA ++GE L +RFDSNCITPG
Sbjct: 77 PQRLFFLSVDGVAPRAKMNQQRSRRFRTAREAEQQEAKAAQRGE-LREHERFDSNCITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL + LR F+K KI+TD LW+ VILSG E PGEGEHKIMDYIRY
Sbjct: 136 TEFMVRLQEGLRAFLKTKISTDPLWQRC---------TVILSGQEAPGEGEHKIMDYIRY 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
MK++PDY+PN RHCLYGLDA LI+LGLCTHE +F +LREEVKF + + EET
Sbjct: 187 MKTQPDYDPNTRHCLYGLDAALIILGLCTHELHFVVLREEVKFGRNVKR-----TSVEET 241
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
+FFLLHL L+R+YLELEF L+ I +IDDWVLMGFL+GNDFIP+LP LHI
Sbjct: 242 RFFLLHLGLLREYLELEFDALRTD---EHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHI 298
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
+ ALPLLY+ Y + PTL G INE G LNL+R + F++ L + + F+E D++Y+
Sbjct: 299 SSNALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHADDLKYMN 358
Query: 438 GKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWR 497
K DV +S+ +D DL ALI + YDD +EE + N
Sbjct: 359 NKSEAFDMDVGEITESQNLDSDLGALINKSMLLYDDDSEEDCSDEN-------------- 404
Query: 498 TNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPH 557
EF +K ++Y K +E++ + Y+ A+QW L YYY G SW WYYP
Sbjct: 405 AVLLKEFQNYKRNFYRNKFK-RDPNDELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPF 463
Query: 558 HYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILE 617
HY P+ISD+K+ + + + MG PFLPFQQLLAVLPAAS +LLP Y +LM L SP+ E
Sbjct: 464 HYTPFISDLKNIEQVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAE 523
Query: 618 YYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
+YP EF +DLNGKK DWEAVVLIPFIDE +L+ AM E L+ EER RNRHGPM VY Y
Sbjct: 524 FYPLEFESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERNRHGPMYVYKY 583
Query: 678 SNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDV---NLKLYVTHFP 734
S V G A A+ + E + +I V+ L +C ++ ++ FP
Sbjct: 584 STVAQGPMPAYPPLRALPVLYCTEVAKWSHEIAVN---LPYSVCIELPNAARTVFFPGFP 640
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVP-SLKQVADQILGKTIFINYPHL 793
T++H+ F ++ N +VKVF+Q SRN++I++ K Q+ +L VA Q LGK I + +PHL
Sbjct: 641 TMQHLPFDFELRNDRVKVFEQVSRNQNIVLKPRKRQLEDTLTAVASQYLGKVIHVGWPHL 700
Query: 794 IEIRVQAVATKDSRI---SFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGN 850
++ V VAT+D R+ N F+ K +Q+ F ++G+ N
Sbjct: 701 VKAIVVRVATRDQRVDSEGITLNDSRRFDSECKALQEHF-----------INRMGIQFAN 749
Query: 851 TEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQ-QARESLEYKTIDE 909
+VLVY + F +G + + ++ S Y Q V +L R + ++
Sbjct: 750 YDVLVYVRTFAGNSTEFRDKGALMVRDSWSSSVTGYPAQGVVADLTVWERMRKNFLNVEH 809
Query: 910 IFYPGCQCFALSNPHYGSGGCVIS-TVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNY 968
F G F +++P+YGS G V + N I++S V+ EP ++ LQ++ +Y
Sbjct: 810 YFPVGSTIFLITDPYYGSEGTVQDPRLAYTNGRIQVSIMVRPEPKVNAARQLQEERDRDY 869
Query: 969 LPSYTVASKLSISPLLLSRFTGSIFII----DSTEEGAKRHNIGLNIKFSRKNEEVVGFT 1024
L ++ V + L IS L R +G+++++ E +HNIGL +K+ R+NEE G+
Sbjct: 870 LSTFQVCNLLRISGRTLGRLSGTVWVVLGPRRQKMENVTKHNIGLQLKYPRQNEERAGYC 929
Query: 1025 RRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSD--DIYLRDDVFPHQ-GEQRVA 1081
R T +W+Y+ V L++NY +++P+V F D S+D + DVFP+ G +RV
Sbjct: 930 FR--TNNQWYYSSLAVDLMRNYCQRYPDVIDFFGD-SNDRAEFVFEQDVFPNAVGHRRVE 986
Query: 1082 QIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE-KQITLFVKPNKLYIPK 1140
++ +W+++QPH K E CG+ V + + L+ AVD + K + L VKP+ L P
Sbjct: 987 ELANWVRQQPHMKVERISCGSKTVCRETIELLIAAVDDLRSLPVKHVKLQVKPHLLIKPN 1046
Query: 1141 PTLDKLCPD---PDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI----------VQGETSY 1187
TL PD +LFDRVV +R Y VP+G +GT+IGI ++ +
Sbjct: 1047 VTL----PDVYRSKRPVRLFDRVVIVRTIYMVPVGTKGTVIGIHPVTDPNPVRLECVHAV 1102
Query: 1188 DAMYDVVFDKPFP-----HGVKIRCSESRGYRMPAQAMI 1221
D V+FD P P HG+ +E R Y++P A++
Sbjct: 1103 DTFCKVLFDSPVPNCNNIHGI----AEDRVYKVPEIALV 1137
Score = 201 bits (512), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/129 (69%), Positives = 113/129 (87%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE+ RE+ IPEFDNLYLDMNGI+HNCSHP+DN+ HF + E+QI
Sbjct: 1 MGVPKFFRYISERYPCLSELAREHCIPEFDNLYLDMNGIVHNCSHPDDNNIHFHLEEEQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FQ+IF+Y++ LF +I+P++LFF+++DGVAPRAKMNQQR RRFR+A+EAE E KA ++GE
Sbjct: 61 FQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSRRFRTAREAEQQEAKAAQRGE 120
Query: 121 RLPTEKRFD 129
L +RFD
Sbjct: 121 -LREHERFD 128
>gi|324500092|gb|ADY40054.1| 5'-3' exoribonuclease 1 [Ascaris suum]
Length = 1700
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/1208 (38%), Positives = 685/1208 (56%), Gaps = 138/1208 (11%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT 185
F++I F PK++FFMAIDGVAPRAKMNQQR RRF SAK AE+ + A+ KG+ +P
Sbjct: 65 FNYIDTLFSIIEPKRVFFMAIDGVAPRAKMNQQRARRFMSAKNAELALKIAESKGQEIPK 124
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPG 245
EKRFD NCITPGT FM RLH+QL+YF+K+KI+TD W+ + V LSGH PG
Sbjct: 125 EKRFDPNCITPGTEFMARLHEQLQYFIKMKISTDT---------AWQGIRVYLSGHNCPG 175
Query: 246 EGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNT--K 303
EGEHKIMD+IR +S+PDY+ N RHCLYGLDADLIMLGLC+HEP+FSLLREEVKF K
Sbjct: 176 EGEHKIMDFIRSERSQPDYDANTRHCLYGLDADLIMLGLCSHEPHFSLLREEVKFGRPPK 235
Query: 304 SNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFL 363
+ + F LLHLSL+R+YL EF +++ LSFP+ +E++IDDWVLMGFL
Sbjct: 236 HKHKSTPKTGVDGITFHLLHLSLLREYLSWEFRPIQDK--LSFPYDMESVIDDWVLMGFL 293
Query: 364 IGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDF 423
+GNDFIP+LP +HI ALP LY Y +VLP LDGY+NE G LNLKRFEKFL + D
Sbjct: 294 VGNDFIPHLPHVHIHEDALPALYSTYVQVLPQLDGYLNEAGILNLKRFEKFLKAFSKIDR 353
Query: 424 EQFREKYADIQYLEGKMGKKFSDVFHKEKSKEM----DPDLAALIKATDDDYDDG----T 475
+ F ++ D YL K + S KEK+K + D + L +D + ++G +
Sbjct: 354 QSFMQRMEDEDYLASKRTQPSSKREPKEKAKVIGPHDDDEEEELQPYSDSESENGDEESS 413
Query: 476 EEVLNYANY----------------------------------------------EEYYY 489
EE ++ + EE Y
Sbjct: 414 EENVHRGAFDSDSENEDLPEVEPTPEVPSAWELLKDGIPPLEDESEERPLVGIIDEENYE 473
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCV 549
+D D W + F HK +YY+ K++Y ++ E LR+QAE YIRAIQWNLHYYY+GC
Sbjct: 474 NDCDVVWTHSVNRAFKDHKRNYYNDKMNYKNISKEELREQAEGYIRAIQWNLHYYYHGCC 533
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMT 609
SW+W+YPHHYAPYISD+ DF+ + + +E+ PF PF+QL+AVLPAAS + LP P Q LM
Sbjct: 534 SWNWFYPHHYAPYISDVTDFADMEINFELSAPFHPFEQLMAVLPAASADCLPVPLQELMF 593
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
E+SPILE+YP +F TDLNGKK DWEAVVLIPFI+E +L+ A+ + E LTDEER RN H
Sbjct: 594 DESSPILEFYPRDFETDLNGKKNDWEAVVLIPFINEKRLLDAIASKEARLTDEERRRNSH 653
Query: 670 GPMLVYTY--SNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLK 727
GP L++T S+ L + P+ FP I A + ++ + +++ GL + V +
Sbjct: 654 GPHLLFTTDPSSRTLLKSSLPNAFPEIPNCIAKMTEVDMNEFRIPRSQVVHGLLKGVRMD 713
Query: 728 LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKV-QVPSLKQ----VADQIL 782
+ FPT+KH+ T ++ A + VFQQPS+ +S+I+ K+ + P L + +A ++
Sbjct: 714 VLFPGFPTMKHIPHTAELHFANICVFQQPSKKQSMIL---KIGERPELNKDMLLLAFDLI 770
Query: 783 GKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYT 842
K + I++P L + RV ++ T + + + + V KD DA++ +
Sbjct: 771 DKEVHIDWPILKKARVHSLWTAEKKYT-KEGEDMVCNDLKKDEVDAYEDYVAMARKREFE 829
Query: 843 KLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS-----------TVTYAYQSA 891
+ G+D+ + + P+ +Y +V +Q+ IR ++ Q A
Sbjct: 830 RCGIDVDERKGIALVCPMLGLQY------RVEKQKVVIRRQWCPPEDARPVSINLLVQGA 883
Query: 892 VLNLQQARESLEYKTIDEIFYPGCQCFALSNP--HYGSGGCVISTVKEENSFIKLSFKVQ 949
+ + R+ EY +++E + + F +S P +YG + V+E N K + V
Sbjct: 884 LED--SGRDGKEY-SLEEAYPVNSKVFIISPPSKYYGYS----AVVRENNLLTKSTLTVS 936
Query: 950 QEPDLSDLVHLQDDTVYNY----LPSYT---VASKLSISPLLLSRFTGSIFI------ID 996
D+ + D + NY +P Y+ VA + S++ +++R TG +++ D
Sbjct: 937 CTAPAVDVNFV--DIIRNYDRFAIPWYSLHEVAKRTSLNKDVVARITGCVYMNACDRPTD 994
Query: 997 STEE--GAKRHNIGLNIKFSRKNEEVVGFTRRDETTKK--WFYTEQVVTLIKNYMKQFPE 1052
+T + R IGL +KFS++N+ V +TRR TK+ W Y+ + V L++ Y ++FPE
Sbjct: 995 ATTAVYTSDRIAIGLELKFSKRNQSVPDYTRR---TKEGYWQYSFKTVVLLQQYAQKFPE 1051
Query: 1053 VFGFLKD-HSSDDIYLRDDVFP----HQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDA 1107
+ +++ H S D + D++P + + R+ ++ +L P V++
Sbjct: 1052 ILKYIEGRHDSRDAFFASDIWPKLISEERQSRIQALLDFLHALPSWAVGREQADGQFVES 1111
Query: 1108 KVVSLIEHAVDTCEKVEK----QITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNI 1163
+V++ +E ++ + Q L VKP+ +Y + PD T+++L DRVV +
Sbjct: 1112 RVIAEVEKRTRNASRIAETQSVQKRLAVKPHAVYRDELNKGGTIPDEHTEYRLLDRVVCV 1171
Query: 1164 RDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINL 1223
R + P G RGT++GIV G T+ + DV+FDKPF +K+R + G R+ ++NL
Sbjct: 1172 RKTRSAPFGERGTVVGIV-GTTTNELRVDVLFDKPFFGALKMRGERASGARLHPSVLLNL 1230
Query: 1224 SYGERLCG 1231
++G RL G
Sbjct: 1231 THGMRLRG 1238
Score = 209 bits (531), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/129 (72%), Positives = 111/129 (86%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV QIPEFDNLYLDMNGIIH C+HPND D FRI+E+QI
Sbjct: 1 MGVPKFYRWISERYPCLSEVVTHKQIPEFDNLYLDMNGIIHGCTHPNDEDISFRISEEQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F+DIF+YI+ LF +I+PK++FFMAIDGVAPRAKMNQQR RRF SAK AE+ + A+ KG+
Sbjct: 61 FRDIFNYIDTLFSIIEPKRVFFMAIDGVAPRAKMNQQRARRFMSAKNAELALKIAESKGQ 120
Query: 121 RLPTEKRFD 129
+P EKRFD
Sbjct: 121 EIPKEKRFD 129
>gi|195133694|ref|XP_002011274.1| GI16439 [Drosophila mojavensis]
gi|193907249|gb|EDW06116.1| GI16439 [Drosophila mojavensis]
Length = 1816
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/1116 (39%), Positives = 647/1116 (57%), Gaps = 78/1116 (6%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+KLFF+A+DGVAPRAKMNQQR RRFRSA+EAE LE KA+++GE+ E RFDSNCITPG
Sbjct: 77 PQKLFFLAVDGVAPRAKMNQQRSRRFRSAREAEQLEAKARQRGEKREHE-RFDSNCITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL LR F++ KI+ D LW+ VILSG ETPGEGEHKIMDYIRY
Sbjct: 136 TEFMVRLQAGLRCFLRTKISQDPLWQKCR---------VILSGQETPGEGEHKIMDYIRY 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
MK++P ++PN RHCLYGLDADLI+LGLCTHE +F +LREEVKF + + EET
Sbjct: 187 MKAQPTFDPNTRHCLYGLDADLIILGLCTHELHFVVLREEVKFGRNVKR-----TSVEET 241
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
+FFLLHL L+R+YLELEF +L P + +IDDWVLMGF++GNDFIP+LP LHI
Sbjct: 242 RFFLLHLGLLREYLELEFHELSTP---EQKLDVAQLIDDWVLMGFMVGNDFIPHLPCLHI 298
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
+ ALPLLYK Y + L G INE G LNL R ++FL L+ + + F E D++Y+
Sbjct: 299 SSNALPLLYKTYIRIYKQLGGNINEHGKLNLDRLQQFLHALSEVELQLFEEHSDDLKYMN 358
Query: 438 GKMGKKFSDV--FHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEE 495
K D+ + + + DLAALI + YE+ + ++
Sbjct: 359 AKTEAFDVDIDDIKNDSGESYNEDLAALIDES-------------MKLYEDDDDDVDPDD 405
Query: 496 WRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYY 555
+ SEF +K +YY K ++ +++ + + YI AIQW L YYY G SW WYY
Sbjct: 406 EQAVLRSEFQNYKRNYYRNKFK-NEMHEDLISELSYHYISAIQWVLDYYYRGVQSWDWYY 464
Query: 556 PHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPI 615
P HYAP+ISD+ + + + ++MG+PFLPFQQLLAVLPAAS LLP Y +LM NSP+
Sbjct: 465 PFHYAPFISDLNNIKNTKVNFKMGKPFLPFQQLLAVLPAASVNLLPMAYHDLMLKPNSPL 524
Query: 616 LEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
E+YP EF +DLNGKK DWEAVVLIPFI+E +L+ AM E L+ EER RNRHGPM Y
Sbjct: 525 AEFYPTEFESDLNGKKHDWEAVVLIPFIEEKRLLSAMADCEPQLSVEERERNRHGPMYQY 584
Query: 676 TYSNVNLG--TALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHF 733
Y+ + G LAP + E + D+I ++ + + ++ F
Sbjct: 585 DYNAKSQGPMKGLAP--LKPLQNVFCTELARWSDEIALNSPRTVCVELANAARHVFFPGF 642
Query: 734 PTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQV-PSLKQVADQILGKTIFINYPH 792
PT+KH++F ++ + +VKVF+QPSRN+S++++ + + SL+ VA Q LG+ ++I +PH
Sbjct: 643 PTMKHLEFDFELRHDRVKVFEQPSRNQSMVLMPRQREAQDSLQSVAAQHLGQVVYIGWPH 702
Query: 793 LIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTE 852
LI+ +V++VAT+D + D R D KS+ + + ++ + N +
Sbjct: 703 LIKAKVESVATRDQVVDRDGIRANEPRRFDSDC--------KSLEEHFTGRMAIKFPNYD 754
Query: 853 VLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESL--EYKTIDEI 910
VL+Y + FG RG V + ++ + Y Q V ++ + R++L ++ I+++
Sbjct: 755 VLIYIRTYIGSSVEFGKRGNVFMKDSWSSAITAYPAQGVVSDI-KVRDNLHAQFNKIEQL 813
Query: 911 FYPGCQCFALSNPHYGSGGCVIS-TVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYL 969
F G F + P+ GS G V+ + ++++ +V EP L LQ++ +++
Sbjct: 814 FPTGSTVFFIGKPYAGSEGTVLDPMLVYSCGRVQVNIRVGPEPQLMPARLLQEERDRDFM 873
Query: 970 PSYTVASKLSISPLLLSRFTGSIFII----DSTEEGAKRHNIGLNIKFSRKNEEVVGFTR 1025
SY V +L+++ L R TG+++++ E +HNIGL +K+ R NEE G+ R
Sbjct: 874 NSYKVCRELNVNSKCLGRLTGTVWVVLGPRREKMENVSKHNIGLQLKYPRLNEERAGYCR 933
Query: 1026 RDETTKKWFYTEQVVTLIKNYMKQFPEVFG-FLKDHSSDDIYLRDDVFPH-QGEQRVAQI 1083
R +WFY+ V L+ Y++ FP + F + + +D++PH G+ + +
Sbjct: 934 R--INNQWFYSSLAVDLMHTYIENFPAIVDYFSRSGDRGEFIYEEDIYPHAMGQHLIEDV 991
Query: 1084 VSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE-KQITLFVKPNKLYIPKPT 1142
+W+++QPH K + CG+ V + V L+ AVD + K + L VKP+ L P T
Sbjct: 992 ANWVRQQPHMKVDRITCGSRTVCKETVELLIKAVDELRMLPVKNVKLQVKPHLLVKPNVT 1051
Query: 1143 LDKLCPD---PDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI----------VQGETSYDA 1189
L PD +LFDRVV +R Y VP+G T+IGI ++ + +
Sbjct: 1052 L----PDVYRTSGAVRLFDRVVVVRTIYMVPVGITATVIGIHPVSDPNPVRLECLNAVET 1107
Query: 1190 MYDVVFDKPFPHGVKIR-CSESRGYRMPAQAMINLS 1224
+++FD+P + I ++ R Y++P A++ +S
Sbjct: 1108 FCELLFDRPVSNCGDIHGIADERIYKVPESALVIIS 1143
Score = 208 bits (530), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/129 (72%), Positives = 114/129 (88%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE+ RE+ IPEFDNLYLDMNGI+HNCSHP+D++ HF + E QI
Sbjct: 1 MGVPKFFRYISERYPCLSELAREHSIPEFDNLYLDMNGIVHNCSHPDDSNIHFHLEETQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FQDI++YI+ LF +I+P+KLFF+A+DGVAPRAKMNQQR RRFRSA+EAE LE KA+++GE
Sbjct: 61 FQDIYNYIDKLFYLIKPQKLFFLAVDGVAPRAKMNQQRSRRFRSAREAEQLEAKARQRGE 120
Query: 121 RLPTEKRFD 129
+ E RFD
Sbjct: 121 KREHE-RFD 128
>gi|194762996|ref|XP_001963620.1| GF20490 [Drosophila ananassae]
gi|190629279|gb|EDV44696.1| GF20490 [Drosophila ananassae]
Length = 1605
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/1122 (39%), Positives = 657/1122 (58%), Gaps = 99/1122 (8%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P++LFF+A+DGVAPRAKMNQQR RRFRS++EAE +E KA ++GER E RFDSNCITPG
Sbjct: 77 PQRLFFLAVDGVAPRAKMNQQRSRRFRSSREAEQMESKALQRGERREHE-RFDSNCITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL +LR F++ KI+TD LW+ VILSG ETPGEGEHKIMDYIR+
Sbjct: 136 TEFMQRLQVRLRAFLQTKISTDPLWQRC---------SVILSGQETPGEGEHKIMDYIRF 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
MK++PD++PN RHCLYGLDADLI+LGLCTHE +F +LREEVKF + + EET
Sbjct: 187 MKAQPDFDPNTRHCLYGLDADLIILGLCTHELHFVVLREEVKFGRNVKR-----TSVEET 241
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
+FFLLHL L+R+YLELEF L + +IDDWVLMGF++GNDFIP+LP LHI
Sbjct: 242 RFFLLHLGLLREYLELEFDDLNTD---EHKLDVAQLIDDWVLMGFMVGNDFIPHLPCLHI 298
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
+ ALPLLY Y ++ P L G INE G LNL+R + FLT L + EQF+E D++Y+
Sbjct: 299 SSNALPLLYSTYIKIYPKLGGNINENGKLNLQRLQVFLTALTEVELEQFKEHADDLKYMN 358
Query: 438 GKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWR 497
K DV ++ D DLAALI + Y+ ++E L DE
Sbjct: 359 AKTEAFDVDVSEITGTESYDSDLAALIDNSMKLYEGDSDEDL----------CDE----A 404
Query: 498 TNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPH 557
+ EF +K +YY K + ++++ + + Y+ A+QW L YYY G SW WYYP
Sbjct: 405 ASLMHEFQNYKRNYYCTKFK-SDSPDQLIEELSYHYVTALQWILDYYYRGVQSWDWYYPF 463
Query: 558 HYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILE 617
HYAP+ISDI++ + + + +GEPF PFQQLLAVLP+AS +L+P + +LM SP+ E
Sbjct: 464 HYAPFISDIRNVEKVKVNFHLGEPFFPFQQLLAVLPSASFKLMPTAFHDLMLNPESPLAE 523
Query: 618 YYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
++P +F +DLNGKK DWEAVVLIPFIDE +L+ AM E L++ E+ RNRHGPM Y Y
Sbjct: 524 FFPVDFESDLNGKKHDWEAVVLIPFIDEKRLLNAMVPCELRLSEAEKERNRHGPMYQYDY 583
Query: 678 SNVNLGTALAPDYFP---AINENHAVEKPLYRDDIYVH-PNKLRKGLCQDVNLKLYVTHF 733
+ + G LAP FP + + E + +I +H PN + L Y F
Sbjct: 584 TPQSQG-PLAP--FPPLRGLAHLYCTEVSRWAREIALHLPNSVCVELPNSARHVFY-PGF 639
Query: 734 PTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVP-SLKQVADQILGKTIFINYPH 792
PT++H+ F ++ N +VKVF+Q SRN+++++ K + +L+ VA + L + + I +PH
Sbjct: 640 PTMQHLPFDFELRNDRVKVFEQVSRNQNMVLKPLKGPLADTLEAVAGKFLEQVVHIGWPH 699
Query: 793 LIEIRVQAVATKDSRI---SFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIG 849
LI+ +V VAT+D ++ N FE K +Q+ F T++G+
Sbjct: 700 LIKAKVVRVATRDQKVDSEGLTVNDARRFESECKSLQEHFT-----------TRMGIQFA 748
Query: 850 NTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESL--EYKTI 907
+ EVLVY + FGP+G+V + + + Y V +L +E++ +++ +
Sbjct: 749 SYEVLVYVRTYAGSSVEFGPKGEVFNRDAWSSTVTGYPAHGVVADL-IVKENMRQQFRNM 807
Query: 908 DEIFYPGCQCFALSNPHYGSGGCVISTVKEEN-SFIKLSFKVQQEPDLSDLVHLQDDTVY 966
+++F GC F + NP+YGS G V+ + N I+++ +V+ EPDL +Q++
Sbjct: 808 EDLFPVGCPIFFIGNPYYGSEGTVLDPMLVYNCGRIQVNIRVRPEPDLMAARLMQEERDR 867
Query: 967 NYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE----EGAKRHNIGLNIKFSRKNEEVVG 1022
+++ ++ V +L+I+ L R TGS++++ E +HNIGL +KF R+NEE G
Sbjct: 868 DFMNTFEVCRQLNINNRALGRLTGSMWVVLGPRREKMENVAKHNIGLQLKFPRQNEERAG 927
Query: 1023 FTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYL-RDDVFPHQ-GEQRV 1080
+ R + +WFY+ + +++ Y +FP+V F + Y+ +D++P G+ +
Sbjct: 928 YCCR--SGNQWFYSSLALEVMREYCDRFPDVVEFFGSSNERSEYVFEEDIYPDTVGQGDM 985
Query: 1081 AQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE-KQITLFVKPNKLYIP 1139
+ +W+++QPH K E CG+ V + V L+ AVD + K + L VKP+ L P
Sbjct: 986 DVLATWVRQQPHMKVERVGCGSKTVCRETVELLLTAVDELRALPVKDVKLQVKPHLLIKP 1045
Query: 1140 KPTLDKLCPDPDT-----KFKLFDRVVNIRDCYTVPLGYRGTIIGI----------VQGE 1184
TL PD +LFDRV+ +R Y VP+G +GT+IG+ ++
Sbjct: 1046 NVTL------PDVYRSRRPVRLFDRVIVVRTIYMVPVGIKGTVIGVHPITDPNPVRLECV 1099
Query: 1185 TSYDAMYDVVFDKPFP-----HGVKIRCSESRGYRMPAQAMI 1221
+ D +V+FDK P HG+ + R Y++P A++
Sbjct: 1100 RTVDTFCEVLFDKAVPNFNDIHGI----AADRVYKVPEGALV 1137
Score = 189 bits (479), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/129 (71%), Positives = 113/129 (87%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE+ RE+ IPEFDNLYLDMNGI+HNCSHP+D++ HF + E QI
Sbjct: 1 MGVPKFFRYISERYPCLSELAREHSIPEFDNLYLDMNGIVHNCSHPDDSNIHFHLEEAQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FQDIF+Y++ LF +I+P++LFF+A+DGVAPRAKMNQQR RRFRS++EAE +E KA ++GE
Sbjct: 61 FQDIFNYVDKLFYLIKPQRLFFLAVDGVAPRAKMNQQRSRRFRSSREAEQMESKALQRGE 120
Query: 121 RLPTEKRFD 129
R E RFD
Sbjct: 121 RREHE-RFD 128
>gi|195059493|ref|XP_001995648.1| GH17871 [Drosophila grimshawi]
gi|193896434|gb|EDV95300.1| GH17871 [Drosophila grimshawi]
Length = 1754
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/1129 (39%), Positives = 632/1129 (55%), Gaps = 98/1129 (8%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+KLFF+++DGVAPRAKMNQQR RRFR+A+EAE ++ KA ++GE+ E RFDSNCITPG
Sbjct: 77 PQKLFFVSVDGVAPRAKMNQQRSRRFRTAREAEQIDAKALQRGEKRMHE-RFDSNCITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL + LR F++ K++TD LW+ CVILSG ETPGEGEHKIMDYIRY
Sbjct: 136 TGFMSRLQKGLRCFLRTKVSTDTLWQK---------CCVILSGVETPGEGEHKIMDYIRY 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
+K++PD++PNMRHCLYGLDADLI+LGLCTHE +F +LREEVKF + EET
Sbjct: 187 LKAQPDFDPNMRHCLYGLDADLIILGLCTHELHFVVLREEVKFGKNVKRTAV-----EET 241
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
+FFLLHL L+R+YLELEF +L + + +IDDWVLMGFL+GNDFIP+LP LHI
Sbjct: 242 RFFLLHLGLLREYLELEFAELSKS---ERKLDVAQLIDDWVLMGFLVGNDFIPSLPLLHI 298
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
AL LLYK Y V P L G INE G LNL+R F+ L+ + + F E+ + Y
Sbjct: 299 HTNALSLLYKTYIRVYPQLGGNINEQGRLNLQRLAIFMNALSEVEMQIFDEQSDKLHYAN 358
Query: 438 GKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDD---------GTEEVLNYANYEEYY 488
K DV E + D DL ALI + Y+D G + N++ Y
Sbjct: 359 SKNEAFDVDV---EDLRNRDKDLTALIDNSMKLYEDDSDEDLSDEGAALNGEFQNFKRNY 415
Query: 489 YSDE-DEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNG 547
Y ++ E +E G H Y+ A+QW L YYY G
Sbjct: 416 YRNKFKNEMHDGLIAELGHH-------------------------YVTALQWVLDYYYRG 450
Query: 548 CVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNL 607
SW WYYP+HYAP+ISDI D + + ++MG+PF+PF+QLLAVLP AS LLP Y +L
Sbjct: 451 VQSWDWYYPYHYAPFISDITDIPSVKINFQMGKPFMPFEQLLAVLPPASSALLPVAYHDL 510
Query: 608 MTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
M +S + ++YP+EF TDLNGK +WEAVVLIPFID+ +L+ AM + LT EER RN
Sbjct: 511 MLNPSSTLADFYPKEFETDLNGKMHEWEAVVLIPFIDQRRLLDAMSECDSQLTTEERLRN 570
Query: 668 RHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLK 727
RHGPM Y YS+ + G + E +DI +H +
Sbjct: 571 RHGPMYQYDYSSKSQGAMTGVPPLKNLQNVFCTETSRRIEDIALHIPYTACAELPNAARH 630
Query: 728 LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDK--VQVPSLKQVADQILGKT 785
++ FPT+KH++F ++ VKVF Q SRN+++I+V K + P ++ VA Q L +
Sbjct: 631 VFFPGFPTMKHLEFDFEMRVGHVKVFDQRSRNQTLILVPKKRVFEEPIIQTVAAQYLDQV 690
Query: 786 IFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLG 845
++I +PHLI+ +V +V T++ + DKN ++ D Q F KS+ D + ++G
Sbjct: 691 VYIGWPHLIKAKVDSVCTREQIV--DKNG-----VSSNDAQH-FDSEFKSLHDHFSNRMG 742
Query: 846 VDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQ-QARESLEY 904
+ N +VL+ + FG RG++ + T+ S Y Q V N+Q + R ++
Sbjct: 743 IKFSNYDVLLKVRTYVGSSVDFGNRGEIYTKETWSSSVTPYPAQGIVANIQVKDRMRKQF 802
Query: 905 KTIDEIFYPGCQCFALSNPHYGSGGCVIS-TVKEENSFIKLSFKVQQEPDLSDLVHLQDD 963
K + E+F G F + NP+ GS G V+ + I++ +V EPD+S + Q
Sbjct: 803 KKMAELFPIGSTIFLIGNPYAGSEGTVLDPDLVYACGRIQVDLRVCPEPDMSAAIAQQAR 862
Query: 964 TVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE----EGAKRHNIGLNIKFSRKNEE 1019
+Y + V L+IS LSR TG+++++ E A RHNIGL +K+ R NEE
Sbjct: 863 CDRDYTFHFKVCRDLNISSKCLSRLTGTVWVVLGPRRERVENASRHNIGLQLKYPRLNEE 922
Query: 1020 VVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFL-KDHSSDDIYLRDDVFPHQ-GE 1077
GF R + +W ++ V +++ Y +PEV +L + + + +D++P G+
Sbjct: 923 RAGFCR--QMNNQWNFSSAAVDIMRTYCDLYPEVIDYLTRSNDWAEFGYEEDIYPDAVGQ 980
Query: 1078 QRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTC-EKVEKQITLFVKPNKL 1136
R+ + +W+++QPH + + CG+ V + L+ AVD K + I L VKP+ L
Sbjct: 981 HRIEDVANWVRQQPHMQVDRIACGSRTVCKDTIELLIAAVDDMRHKPIRDIKLQVKPHLL 1040
Query: 1137 YIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI----------VQGETS 1186
P TL + P + +LFDRV +R Y VP+G GT+IG+ + +
Sbjct: 1041 VKPNVTLPERYRSPH-EVRLFDRVAVVRTIYMVPIGATGTVIGVYPVSDLNPVRFECLNT 1099
Query: 1187 YDAMYDVVFDKPFP------HGVKIRCSESRGYRMPAQAMINLSYGERL 1229
D D++FDK P HG+ +E Y++P A+I ++ E +
Sbjct: 1100 VDTFCDILFDKVIPNCSQGIHGI----AEGHVYKIPETAIIVININESM 1144
Score = 197 bits (501), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 112/129 (86%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR+ISERYPCLSE+ RE+ IPEFDNL+LD+NGI+HNCSHP+D + HF + E QI
Sbjct: 1 MGVPKFFRHISERYPCLSELAREHSIPEFDNLFLDVNGIVHNCSHPDDGNIHFHLEETQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FQDI++YI+ LF +I+P+KLFF+++DGVAPRAKMNQQR RRFR+A+EAE ++ KA ++GE
Sbjct: 61 FQDIYNYIDTLFYLIKPQKLFFVSVDGVAPRAKMNQQRSRRFRTAREAEQIDAKALQRGE 120
Query: 121 RLPTEKRFD 129
+ E RFD
Sbjct: 121 KRMHE-RFD 128
>gi|4914494|emb|CAB43711.1| pacman protein [Drosophila melanogaster]
Length = 1613
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/1256 (37%), Positives = 670/1256 (53%), Gaps = 132/1256 (10%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P++LFF+++DGVAPRAKMNQQR RRFR+A+EAE E KA ++GE L +RFDSNCITPG
Sbjct: 77 PQRLFFLSVDGVAPRAKMNQQRSRRFRTAREAEQQEAKAAQRGE-LREHERFDSNCITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL + LR F+K KI+TD LW+ VILSG E PGEGEHKIMDYIRY
Sbjct: 136 TEFMVRLQEGLRAFLKTKISTDPLWQR---------CTVILSGQEAPGEGEHKIMDYIRY 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
MK++PDY+PN RHCLYGLDADLI+LGLCTHE +F +LREEVKF + + EET
Sbjct: 187 MKTQPDYDPNTRHCLYGLDADLIILGLCTHELHFVVLREEVKFGRNVKR-----TSVEET 241
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
+FFLLHL L+R+YLELEF L+ I +IDDWVLMGFL+GNDFIP+LP LHI
Sbjct: 242 RFFLLHLGLLREYLELEFDALRTD---EHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHI 298
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
+ ALPLLY+ Y + PTL G INE G LNL+R + F++ L + + F+E D++Y+
Sbjct: 299 SSNALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHADDLKYMN 358
Query: 438 GKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWR 497
K DV +S+ +D DL ALI + YDD +EE + N
Sbjct: 359 NKSEAFDMDVGEITESQNLDSDLGALINKSMLLYDDDSEEDCSDEN-------------- 404
Query: 498 TNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPH 557
EF +K ++Y K +E++ + Y+ A+QW L YYY G SW WYYP
Sbjct: 405 AVLLKEFQNYKRNFYRNKFKRDP-NDELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPF 463
Query: 558 HYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILE 617
HY P+ISD+K+ + + + MG PFLPFQQLLAVLPAAS +LLP Y +LM L SP+ E
Sbjct: 464 HYTPFISDLKNIEQVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAE 523
Query: 618 YYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
+YP EF +DLNGKK DWEAVVLIPFIDE +L+ AM E L+ EER RNRHGPM VY Y
Sbjct: 524 FYPLEFESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERNRHGPMYVYKY 583
Query: 678 SNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDV---NLKLYVTHFP 734
S V G A A+ + E + +I V+ L +C ++ ++ FP
Sbjct: 584 STVAQGPMPAYPPLRALPVLYCTEVAKWSHEIAVN---LPYSVCIELPNAARTVFFPGFP 640
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVP-SLKQVADQILGKTIFINYPHL 793
T++H+ F ++ N +VKVF+Q SRN++I++ K Q+ +L VA Q LGK I + +PHL
Sbjct: 641 TMQHLPFDFELRNDRVKVFEQVSRNQNIVLKPRKRQLEDTLTAVASQYLGKVIHVGWPHL 700
Query: 794 IEIRVQAVATKDSRISFDK---NSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGN 850
++ V VAT+D R+ + N F+ K +Q+ F T++G+ N
Sbjct: 701 VKAIVVRVATRDQRVDSEGITLNDSRRFDSECKALQEHF-----------ITRMGIQFAN 749
Query: 851 TEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQ-QARESLEYKTIDE 909
+VLVY + F +G + + ++ S Y Q V +L R + ++
Sbjct: 750 YDVLVYVRTFAGNSTEFRDKGALMVRDSWSSSVTGYPAQGVVADLTVWERMRKNFLNVEH 809
Query: 910 IFYPGCQCFALSNPHYGSGGCVIS-TVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNY 968
F G F +++P+YGS G V + N I++S V+ EP ++ LQ++ +Y
Sbjct: 810 YFPVGSTIFLITDPYYGSEGTVQDPRLAYTNGRIQVSIMVRPEPKVNAARQLQEERDRDY 869
Query: 969 LPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDE 1028
L ++ V + L IS L R +G+++++ G +R + N+ ++
Sbjct: 870 LSTFQVCNLLRISGRTLGRLSGTVWVV----LGPRRQKME-NVDQAQHWPAAQVSAAERG 924
Query: 1029 TTKKWFYTEQVVTLIK-------NYMKQFPEVFGFL-KDHSSDDIYLRDDVFPHQGEQRV 1080
+ EQ V L++ + P + L + S + +R P G
Sbjct: 925 ACRILLPHEQPVVLLQPGRGSDAQLLPALPRRYRLLWRLQRSRRVRIRTGRVPQCGWPSP 984
Query: 1081 AQ-IVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE-KQITLFVKPNKLYI 1138
+ + +W+++QPH K E CG+ V + + L+ AVD + K + L VKP+ L
Sbjct: 985 RRGMANWVRQQPHMKVERISCGSKTVCRETIELLIAAVDELRSLPVKHVKLQVKPHLLIK 1044
Query: 1139 PKPTLDKLCPDPDT-----KFKLFDRVVNIRDCYTVPLGYRGTIIGI----------VQG 1183
P TL PD +LFDRVV +R Y VP+G +GT+IGI ++
Sbjct: 1045 PNVTL------PDVYRSKRPVRLFDRVVIVRTIYMVPVGTKGTVIGIHPVTDPNPVRLEC 1098
Query: 1184 ETSYDAMYDVVFDKPFP-----HGVKIRCSESRGYRMPAQAMINLSYGERLCGNSNPHVK 1238
+ D V+FD P P HG+ +E R Y++P A++ + E
Sbjct: 1099 VHAVDTFCKVLFDSPVPNCNNIHGI----AEDRVYKVPEIALVIIKTDE----------- 1143
Query: 1239 NINVMQSRGERNTNYAQVTRQPQRTTFYKENAPLVNSNLQVTSPYHVKVSRCNSQQSSVS 1298
G++ + R PQ E ++ TS +V + S ++
Sbjct: 1144 -------EGKKQNDCELPVRDPQPNQAQDE-------PVRATSSRYVTAAGSTSVPITMK 1189
Query: 1299 QSPSSTMISQQSSPF----NVKPTEKTEP-PPPHKL-NQVNTSSAPKEKPRTSEQN 1348
S + +SSP + KP+ + +P P P ++ N S P KP+ + N
Sbjct: 1190 TQISDEFVKTRSSPIARTDSYKPSSEPKPVPVPEQITNWRERVSTPTNKPQPAPNN 1245
Score = 202 bits (514), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/129 (69%), Positives = 113/129 (87%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE+ RE+ IPEFDNLYLDMNGI+HNCSHP+DN+ HF + E+QI
Sbjct: 1 MGVPKFFRYISERYPCLSELAREHCIPEFDNLYLDMNGIVHNCSHPDDNNIHFHLEEEQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FQ+IF+Y++ LF +I+P++LFF+++DGVAPRAKMNQQR RRFR+A+EAE E KA ++GE
Sbjct: 61 FQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSRRFRTAREAEQQEAKAAQRGE 120
Query: 121 RLPTEKRFD 129
L +RFD
Sbjct: 121 -LREHERFD 128
>gi|47216611|emb|CAG10909.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1574
Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/944 (44%), Positives = 575/944 (60%), Gaps = 62/944 (6%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA +KGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEEKIKKALDKGEVLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RL +QL YFV K++TDKLW++ V V LSGHETPGEGEHK
Sbjct: 130 SNCITPGTDFMARLQEQLEYFVHSKLSTDKLWQN---------VRVYLSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR + P ++PN RHCLYGLDADLIMLGL +HEP FSLLREEV+F K K +
Sbjct: 181 IMEFIRSENNGPGHDPNTRHCLYGLDADLIMLGLTSHEPNFSLLREEVRFGGK--KSQKR 238
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
I PEET F LLHLSLMR+Y++ EF L+ L + +E IIDDW+LMGFLIGNDFIP
Sbjct: 239 ITAPEETTFHLLHLSLMREYIDYEFSVLRNH--LGSTYDLERIIDDWILMGFLIGNDFIP 296
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLYK Y VLP+L GY+NE G LNLK FEK+L KL+ FD E F E +
Sbjct: 297 HLPHLHISHDALPLLYKTYISVLPSLGGYLNENGNLNLKNFEKYLEKLSEFDREHFSEVF 356
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYS 490
D+++ E K+G K+ + E + AA A + G + EE
Sbjct: 357 VDLKWFESKVGNKYLN----EAAGLAAEKEAASKAADQQEAAPGLTAAEKPGDEEEEEED 412
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
+ E+R Q+K YY K+ V+++ L QA CY+ IQW LHYYY+G S
Sbjct: 413 LFETEFR--------QYKRTYYMTKMGVDVVSDDFLALQARCYVEGIQWILHYYYHGVQS 464
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
WSWYYP+HYAP++SDIK+ + L L +++ +PF+PFQQLLAVLPAAS ELLPE Y++LMT
Sbjct: 465 WSWYYPYHYAPFLSDIKNVAELKLTFDLEKPFMPFQQLLAVLPAASMELLPEAYRHLMTS 524
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN--- 667
ENSPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDEV+ H T +
Sbjct: 525 ENSPIIEYYPHDFKTDLNGKQQEWEAVVLIPFIDEVRTHTHTHTHTHTHTHLTLTLTLTL 584
Query: 668 ----RHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQD 723
R G + T++ G+ + D A + E + D V N +R+ + +
Sbjct: 585 LACARCGSVHT-THTMSPSGSGRSSD---ATWQQRGKEH-IPMDAWQVPLNHVRRAIDRS 639
Query: 724 VNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESII--IVQDKVQVPSLKQVADQI 781
LY FPTL+H++ + V VFQQ SR E+ I I+ VA ++
Sbjct: 640 A---LYFCGFPTLQHIKHKFYRKKIGVVVFQQSSRGENTILDILPSNEADTVCDDVALEL 696
Query: 782 LGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP--VFERAAK-----------DMQDA 828
LG ++F+N+PHL E R+ AV+ D R ++ G ++ RA+ Q
Sbjct: 697 LGISVFVNWPHLEEARIVAVSDGDVRFCLEEPPGVQRLYSRASTPPPTKVTCLSDKEQKE 756
Query: 829 FQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAY 888
+ + IT+ + + G+ + T VL+YGQ + +KY G V ++ + + + +AY
Sbjct: 757 WLKDVQGITEHFLRRKGIVVNETAVLLYGQLLTGQKYVPKANGVVEVEKQWAKQVLPFAY 816
Query: 889 QSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVI-STVKEENSFIKLSF 946
Q+ V +++ SL YK+++E+F P F + NP+YG+ G V S+ ++ +++ F
Sbjct: 817 QTVVKDIKAIYSSLPCYKSLEELFPPTTTVFMVGNPYYGAMGEVQDSSDVIKDGRVRVVF 876
Query: 947 KVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEE---GAK 1003
+ EP L L+ Q Y P Y +AS+L IS L+SRF+GSIFI +++ G
Sbjct: 877 NIPHEPQLETLIQNQHKYCVKYSPGYVLASRLGISSNLVSRFSGSIFIGRGSKKDPCGEH 936
Query: 1004 RHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYM 1047
R NIGLN+KF++KNEEV G+T+R E K+W Y+ V ++ Y+
Sbjct: 937 RSNIGLNLKFNKKNEEVPGYTKRTE--KEWLYSAAVEEVLAEYL 978
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSE+V+E+QIPEFDNLYLDMNGIIH CSHPND D HFRI+E++I
Sbjct: 1 MGVPKFYRWISERYPCLSEIVKEHQIPEFDNLYLDMNGIIHQCSHPNDEDVHFRISEEKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA +KGE
Sbjct: 61 FADIFHYVEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEEKIKKALDKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 VLPTEARFD 129
Score = 130 bits (326), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 98/176 (55%), Gaps = 25/176 (14%)
Query: 1078 QRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCE---------------- 1121
++VA+I +WL+ P + A C V+DA +V IE AV+ +
Sbjct: 1065 EKVAEITTWLRSHPVSSATRTSCELQVLDAAIVEKIEEAVEKAKVGEASRRDALVKSFNS 1124
Query: 1122 ---------KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLG 1172
K K++ + VKP+ L+ P + PDPD +++LFDRVVN+R+ +TVPLG
Sbjct: 1125 NLCLSLQVKKGTKKVRVTVKPHLLFRPLEQQQGVVPDPDAEYRLFDRVVNVRESFTVPLG 1184
Query: 1173 YRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
RGTIIGI E + +Y+V+FD+ F G+ IR + R YR+P A+INL +G R
Sbjct: 1185 LRGTIIGIKGAEREAEVLYEVLFDEEFAGGLHIRSASCRAYRLPPCALINLCHGSR 1240
>gi|241602466|ref|XP_002405190.1| pacman protein, putative [Ixodes scapularis]
gi|215500574|gb|EEC10068.1| pacman protein, putative [Ixodes scapularis]
Length = 1112
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/680 (53%), Positives = 478/680 (70%), Gaps = 31/680 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K FFMA+DGVAPRAKMNQQRGRRFRSAKEA LE++A +GE LPTE RFDSNCI+PG
Sbjct: 4 PRKTFFMAVDGVAPRAKMNQQRGRRFRSAKEALALEKQALSRGEVLPTEARFDSNCISPG 63
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM L +QL FV +KI++D LW++ V V LSGH+TPGEGEHKIMD+IR
Sbjct: 64 TSFMANLQEQLEQFVAMKISSDPLWQE---------VKVYLSGHQTPGEGEHKIMDFIRT 114
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
+SKP Y+PN RHCLYGLDADLIMLG C+HEP+F+LLREE+ + K N+ ++ PEE
Sbjct: 115 ERSKPGYDPNTRHCLYGLDADLIMLGTCSHEPHFALLREEIVYGKKQNQ--KRLNVPEEI 172
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F LLHLSL+R+YL EF +K+ L F FS+E+++DDWVLM FL+GNDF+P+LP+LHI
Sbjct: 173 TFHLLHLSLLREYLSYEFQAVKDS--LPFEFSLESLVDDWVLMCFLVGNDFLPHLPNLHI 230
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
+ ALP+LY+ Y EVLPTL GYINE G LNL+RFEKFL +L+ FD+E+F + AD ++LE
Sbjct: 231 AHNALPILYQAYIEVLPTLGGYINEQGTLNLERFEKFLKRLSQFDYEKFTDVQADQKFLE 290
Query: 438 GKM-------GKKFSDVFHKE-KSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYY 489
K G D K + KE DPD + + G E ++ + +Y
Sbjct: 291 SKRTAATAPNGVVSQDSQDKAARDKERDPDEQRKVLLSP-----GLLEKFSHLDIPDY-- 343
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCV 549
+ DEE EF QHK DYY KL+Y V EV+++QA Y+RAIQWNLHYYYNG
Sbjct: 344 -ESDEESEGTLEMEFRQHKRDYYTTKLEYKDVNKEVMQEQAHGYVRAIQWNLHYYYNGVQ 402
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMT 609
SW+WYYPHHY+PYISDIKDF +++ +E+G+PFLPFQQL+++LPAASK L+P+ YQ LM
Sbjct: 403 SWNWYYPHHYSPYISDIKDFQSIDMSFELGKPFLPFQQLMSILPAASKGLVPKAYQALME 462
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
E SP+L+YYP++F TDLNGK+Q+WEAVVLIPFIDE +L+ M ++ LTDEER RN H
Sbjct: 463 GEESPVLDYYPQDFTTDLNGKQQEWEAVVLIPFIDEDRLLPVMQELDSKLTDEERERNTH 522
Query: 670 GPMLVYTYSNVNLGTALAPD--YFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLK 727
G L++TYS+ + + + P I NHA + L ++ + +++KGL V
Sbjct: 523 GGHLLFTYSHEPVTSLKCKNKGLLPNIEVNHARVEVLDKNIFRLPKEEIKKGLLDGVKTD 582
Query: 728 LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIF 787
+Y FPT +H+ T K+E A VKVFQ S+NES+++ + +LK+VAD++LGK+++
Sbjct: 583 IYFAGFPTFRHLPHTAKLERASVKVFQSLSKNESVLLTLTETPDKTLKEVADELLGKSVY 642
Query: 788 INYPHLIEIRVQAVATKDSR 807
+N+PHL+E V AV ++D R
Sbjct: 643 VNWPHLLEALVVAVTSRDER 662
Score = 216 bits (550), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 215/386 (55%), Gaps = 17/386 (4%)
Query: 852 EVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNL-QQARESLEYKTIDEI 910
E LV +Y GP+G++T + + +V YA QS V ++ + E ++KT++E+
Sbjct: 650 EALVVAVTSRDERYICGPKGRITLDKQWSLHSVPYALQSLVKDITEHCPEFEQFKTVEEL 709
Query: 911 FYPGCQCFALSNPHYGSGGCVIS---TVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYN 967
F G CF L +PHYG G V+ + K+ ++L+ + EP+L + + + +
Sbjct: 710 FPVGKTCFMLGHPHYGCQGEVVDPKPSTKQGRIVVRLN--IPPEPNLEGV----NLSQVH 763
Query: 968 YLPSYTVASKLSISPLLLSRFTGSIFI-IDSTEEGAKRH-NIGLNIKFSRKNEEVVGFTR 1025
Y+ S+ +A L ++ L +SR TG++++ ++S E A N+GLN+KF++ EEV G+++
Sbjct: 764 YMSSHQLAQWLGVNGLFVSRITGTVYVQMNSREADAPSLVNVGLNLKFNKSGEEVPGYSK 823
Query: 1026 RDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDH-SSDDIYLRDDVFPHQGEQRVAQIV 1084
R T WFY+ + +++ Y+ +F ++ D I + D + +G++ V ++
Sbjct: 824 RANET--WFYSNKCHNVLQEYLTKFASFVEKIQPFMDRDRISVEDLYYKGEGKEEVREVA 881
Query: 1085 SWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLF--VKPNKLYIPKPT 1142
W+KEQ A+ G+ +D VV IE VD E+Q + F V+P L+
Sbjct: 882 KWIKEQECAQLPRVKSGSESLDEGVVKAIEDTVDKLRAGEQQRSTFLDVQPKSLFRAALH 941
Query: 1143 LDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHG 1202
+ PDP F+LFDRVVN+R+ VPLG RGT+ GI + E + +VVFD+ F G
Sbjct: 942 CGWMQPDPSATFRLFDRVVNVRENIAVPLGLRGTVTGICKVEEGEPKLCEVVFDQSFVGG 1001
Query: 1203 VKIRCSESRGYRMPAQAMINLSYGER 1228
+ +RCS +RGY++ +++NLS+G R
Sbjct: 1002 LTLRCSPNRGYKLSTLSLVNLSHGVR 1027
Score = 94.4 bits (233), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 74 MIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITL 133
MI+P+K FFMA+DGVAPRAKMNQQRGRRFRSAKEA LE++A +GE LPTE RFD
Sbjct: 1 MIKPRKTFFMAVDGVAPRAKMNQQRGRRFRSAKEALALEKQALSRGEVLPTEARFD---- 56
Query: 134 KFCFPKKLFFMA 145
C FMA
Sbjct: 57 SNCISPGTSFMA 68
>gi|242023600|ref|XP_002432220.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
gi|212517617|gb|EEB19482.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
Length = 1587
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/1255 (34%), Positives = 684/1255 (54%), Gaps = 145/1255 (11%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP+ +R+I+ RYPC+++ V +Q+P HF +
Sbjct: 1 MGVPRLYRFINRRYPCVTDYVEVHQVP------------------------HF----ENF 32
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I + F+ E K KE
Sbjct: 33 YIDLNEIIHVCFK----------------------------------DETASGKTKEIFS 58
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
++ T F F +K PKKLFF+++DGVAP+AKMN QRGRRF++AKE E QK +G
Sbjct: 59 KIFTYIEFLFNLIK---PKKLFFLSVDGVAPKAKMNNQRGRRFQAAKELENENQKLLAEG 115
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
+ +P E F+S CI+PGT FM L + L YF++ KI+TD +W+ + VI SG
Sbjct: 116 KPIPDE-NFNSLCISPGTEFMEELDKHLNYFIRKKISTDSMWQK---------IVVIYSG 165
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
++TPGEGEHKIMDYIRY+++ D++P +RHC+Y DADL++LGL HE S+LR +
Sbjct: 166 YKTPGEGEHKIMDYIRYLRTTSDFDPYIRHCIYSSDADLMLLGLALHEINVSILRRDPDS 225
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
++K K + +E K +HLS++RDYL+LEF +LK G L F + +E++IDDW+LM
Sbjct: 226 SSKEKKSNAS----KEEKNIFVHLSILRDYLDLEFQELK--GCLPFEYDLEHLIDDWILM 279
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
FL+GNDFIPNLP++ I + ++ + Y++++ TLDGYIN GYLNL RF+KFL KL+
Sbjct: 280 TFLMGNDFIPNLPNIQIDTNGVLVVLEAYKKIIQTLDGYINLNGYLNLPRFQKFLNKLSE 339
Query: 421 FDFEQFREKYADIQYLEGKMGK--------KFSDVFHKEKSKEMDPDLAALIKATDDDYD 472
D E FRE +AD+ +LEGK + SD K KS DL LIK+T+D ++
Sbjct: 340 HDMESFRETFADLAFLEGKCNQLRPFENDDDLSDESQKRKS-----DLEELIKSTNDMFE 394
Query: 473 DGTEEVLNYANYEEYYYSDEDEE------WRTNFFSEFGQHKTDYYHYKLDYAKVTNEVL 526
+SDE+E F EF K +YY K+ + ++T ++
Sbjct: 395 ----------------FSDEEENHDDDDDDDDTFLFEFKMKKKNYYSDKMCFDEMTEDIS 438
Query: 527 RDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQ 586
++ + YI+ IQW L YY++GC SW+WYYP+HY+P++SDIK+F NL+Y GEP LPF
Sbjct: 439 KNLTKNYIQTIQWILFYYFHGCASWTWYYPYHYSPFLSDIKNFEDYNLEYNKGEPLLPFD 498
Query: 587 QLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEV 646
QL+++LPA+ K LPE Y +LM +SP+ +++P++F DLNGKK DWE+++LIPF+D+
Sbjct: 499 QLVSILPASGKNYLPEVYHDLMNSTDSPLKDFFPDDFKRDLNGKKADWESIILIPFVDQD 558
Query: 647 KLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYR 706
+++K + + LT++E+ RN H PML+YTY++ NLG ++FP + NHA +
Sbjct: 559 EVLKYTTPLRNKLTEKEKIRNSHAPMLIYTYTDKNLGVYKISNHFPDVLANHAQVIEKWH 618
Query: 707 DDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQ 766
+ I V +K+ GL V+ L FP LK++++T I ++ + + S+++
Sbjct: 619 NSILVDKSKMVFGLRPGVS-PLGGPVFPRLKYLKYTSCIMQINLEQWTWSGNDISVVLTL 677
Query: 767 DKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQ 826
+K ++ SL+ VAD +LGK + + +P L E +V VA D +I + R D
Sbjct: 678 EKNEMTSLQNVADDLLGKIVHVRWPFLDEAKV--VAVSDGKIKYTLIRDKEIRRDTLDES 735
Query: 827 DA--FQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTV 884
F + Y + + IG EV+VY + + +KY F G ++ + V
Sbjct: 736 KVKQFIACANAFETKYSKRKAIKIGPVEVIVYVKKNKGQKYVFDSMGNAVNEKLWSSEIV 795
Query: 885 TYAYQSAVLNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFI-- 942
Y Q+ V +L + + YKT+ + F G L PH+GS G ++ +NS +
Sbjct: 796 EYPLQTLVTDLIRDLNNTNYKTVKDAFPVGSSVLFLGQPHFGSMGKIL-----DNSNLLP 850
Query: 943 --KLSFKVQQEPDLSDLVH--LQDDTVYNYLPSYTV---ASKLS-ISPLLLSRFTGSIFI 994
+L +Q S L+ L++ ++ Y AS+L+ I + TG +++
Sbjct: 851 GSRLEVALQVTESKSSLLKNTLENLKLHGKKTEYYYSREASRLAGIDYEVFCHMTGYLYV 910
Query: 995 -IDSTE-EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPE 1052
+D E + + NIGL +K +++N+ ++G+ + + W Y+++ V + + Y +FPE
Sbjct: 911 DVDDPEFKKESKINIGLVLKQNKRNQGIMGYAAKKKNV--WMYSKKAVEVARMYRIKFPE 968
Query: 1053 VFGFLKDHSSDDI-YLRDDVF-PHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVV 1110
V L S DD +L ++ F P +R+ ++ WLK + E + +++ +
Sbjct: 969 VVEALS--SLDDFKFLSNNEFQPKLKVERLIELRDWLKSLEYKNLEFVSGNSEMLEKDEI 1026
Query: 1111 SLIEHAVDTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVP 1170
I A+ E+ K +FV PN LY + L+ L PD + L+DRVV+IR VP
Sbjct: 1027 LKINEALTNNEENVKIQNIFVNPNLLYRSELNLNVLPPDVNVVHSLYDRVVSIRSSGPVP 1086
Query: 1171 LGYRGTIIGIVQGETSYDA-MYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLS 1224
+G +G IIGI + E + Y V+FD+PF G I E + Y+M +++N++
Sbjct: 1087 VGLKGVIIGIYEDEEEKNENFYGVLFDEPFLGGETIHSIEYKYYKMSECSLLNIT 1141
>gi|345495292|ref|XP_001606765.2| PREDICTED: 5'-3' exoribonuclease 1-like [Nasonia vitripennis]
Length = 1200
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/1241 (35%), Positives = 657/1241 (52%), Gaps = 153/1241 (12%)
Query: 127 RFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTE 186
R+ I + P ++ F+A DGVAPRAKMNQQR RFR A++ +LE+ E L T+
Sbjct: 71 RYVEIIFRIVKPLEMLFLAFDGVAPRAKMNQQRANRFRVARDNSILER------EILLTD 124
Query: 187 KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILSGHETPG 245
K FD+N ITPGT FM L +++F+ K++TD LW+ C +ILSG E PG
Sbjct: 125 KLFDANSITPGTVFMADLIDHMKHFIAYKVSTDPLWQK----------CKIILSGSEAPG 174
Query: 246 EGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN 305
EGEHKIM +IRY K++ +YN N RHCLY LDADLI+LGLCTHEP+FSLLRE+ F
Sbjct: 175 EGEHKIMQFIRYHKAQQNYNSNTRHCLYSLDADLIVLGLCTHEPHFSLLREKNTFGK--- 231
Query: 306 KGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIG 365
+++TPEE+ F LLHLSL R+YL EF +K L F F +E IIDDWVL+GFL+G
Sbjct: 232 --AKKMLTPEESDFHLLHLSLFREYLGYEFAPIKSK--LKFEFDLEKIIDDWVLIGFLVG 287
Query: 366 NDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQ 425
NDFIP LP L+I+NGALPLLY VY EVLPTLDGYINE G LNL RFEK++ L+ + +
Sbjct: 288 NDFIPQLPHLNIVNGALPLLYSVYIEVLPTLDGYINEAGELNLSRFEKYIKSLSHVEHKI 347
Query: 426 FREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYE 485
F + S + + +++K++DP + + + D +
Sbjct: 348 FASTVS-------------SKICNVKEAKKVDPITGHFEQLSIESKKDDAK--------- 385
Query: 486 EYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYY 545
D D+E +T +S F + DYY +KL++ ++ ++ YIRAIQW L+YYY
Sbjct: 386 -----DLDQEMKTKEYSNFEVQRRDYYLHKLNFEDLSESLILPLVHEYIRAIQWTLNYYY 440
Query: 546 NGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQ 605
+GC SWSWY+P+HYAP+I D+K ++NLK++M +PFLP Q LLAVLP A+ LLP+P +
Sbjct: 441 HGCCSWSWYFPYHYAPFIRDVKGLENINLKFDMAKPFLPLQHLLAVLPPANSHLLPKPLR 500
Query: 606 NLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERS 665
L+T NSPI+ +YP EF DLN K DWEA+VLIPFI+E +LI AMD+ L +ER
Sbjct: 501 FLLTNSNSPIIHFYPNEFEIDLNDKSNDWEAIVLIPFINEKELISAMDSYITTLNPKERH 560
Query: 666 RNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVN 725
RN +G VYTY+ +LG F + NHA + + D+ V NKL KGLC+DV
Sbjct: 561 RNTNGLTCVYTYTKTDLGYYPVDKVFGSF-INHAQMERINIADMNVSKNKLVKGLCKDVR 619
Query: 726 LKLYVTHFPTLKHVQFTHKIENAKVK-VFQQPSRNESIIIVQDKVQVPSLKQVADQILGK 784
L FPT +H+ T + + K + +P + E I++ VP L+++A ++LG+
Sbjct: 620 FDLSFPGFPTFRHIPHTFGFQMIESKMICNRPIKIEKIMLNVSIKPVPKLEEIAKELLGQ 679
Query: 785 TIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQL---SKKSITDGYY 841
+FIN+P+L E V V D +I D ++ ++D +L S+ S+ + Y+
Sbjct: 680 KVFINWPYLQEAYVIGVTDFDKKIMLDN----FWKNYSEDNLKHAKLSDNSRSSLEEEYF 735
Query: 842 TKLGVDIGNTE--VLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQAR 899
T DI T + G P +G G+V +V + Q V++L
Sbjct: 736 TISDGDIFATSDCCFMLGYPN------YGSIGQV--------KSVNFRQQRVVVSLTVTE 781
Query: 900 ESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVH 959
E + T D F +N Y S + ++ ++ I
Sbjct: 782 EPIFTSTED--------FFVKNNNDYMSPSTIAKSLSINSTLI----------------- 816
Query: 960 LQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGA--KRHNIGLNIKFSRKN 1017
+R TGS+ + + T++ K H+IGL IKF ++
Sbjct: 817 --------------------------NRITGSLLVAEDTDKFGELKYHDIGLRIKFPKQQ 850
Query: 1018 EEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGE 1077
+E+ G++ + +T W+Y+++ V L++NY ++FP++F L + + + ++FP QG
Sbjct: 851 KELFGYSHKKDTF--WYYSQKAVQLLQNYTEKFPDLFVNLNKNVTSSTFTVSELFP-QGS 907
Query: 1078 QRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQ-----ITLFVK 1132
+ + SWL EQ CG + V ++ + C+ KQ + V
Sbjct: 908 NELNAVKSWLLEQQVLYTTFLECGTKTLGLDGVPKLDKFL--CDFRSKQSESKVVEAEVS 965
Query: 1133 PNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYD 1192
L+ P + + PD + KL DR++ R +TVPLG++GTIIGI + + + +Y+
Sbjct: 966 SQLLFRPGTIVGLIPPDLKAQHKLLDRIICCRANFTVPLGHKGTIIGIQEKQDKWKNVYE 1025
Query: 1193 VVFDKPFPHGVKIRCS-ESRGYRMPAQAMINLSYGERLCGNSNPHVK-NINVMQSRGERN 1250
V+FD PF G+ + S + YR+ +N+S+G+R + K +V + R
Sbjct: 1026 VLFDSPFTAGLTLYESFPHKCYRLTIADFVNISFGQRNASTRPTNEKPKTDVKNAPPPRP 1085
Query: 1251 TNYAQVTRQPQRTTFYKENAPLVNSNLQVTSPYHVKVSRCNSQQSSVSQSPSSTMISQQS 1310
QP + KE A + N+N + +K++ ++ + +Q PS T ++
Sbjct: 1086 NCPNNFRSQPLKND--KEPAVVRNNNAK------IKLTGHSTTSVNRNQPPSHT----EN 1133
Query: 1311 SPFNVKPTEKTEPPPPHKLNQVNTSSAPKEKPRTSEQNQIK 1351
P + + P N N SS K +P + N K
Sbjct: 1134 RPPVTTDNRQNKRPIGRNNNSRNESSQVKNRPAAASNNSAK 1174
Score = 170 bits (431), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 105/134 (78%), Gaps = 11/134 (8%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ- 59
MGVPKFFR+ISERYPC++++++E++IP++DNLYLDMN IIH CSHP D+D HFRI +K+
Sbjct: 1 MGVPKFFRFISERYPCINKIIKEHEIPQYDNLYLDMNSIIHTCSHPTDSDVHFRIGKKEF 60
Query: 60 ----IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA 115
IF+++ Y+EI+FR+++P ++ F+A DGVAPRAKMNQQR RFR A++ +LE+
Sbjct: 61 SDEDIFENVSRYVEIIFRIVKPLEMLFLAFDGVAPRAKMNQQRANRFRVARDNSILER-- 118
Query: 116 KEKGERLPTEKRFD 129
E L T+K FD
Sbjct: 119 ----EILLTDKLFD 128
>gi|212645611|ref|NP_496945.3| Protein XRN-1 [Caenorhabditis elegans]
gi|194680614|emb|CAC35856.3| Protein XRN-1 [Caenorhabditis elegans]
Length = 1591
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/1213 (35%), Positives = 650/1213 (53%), Gaps = 165/1213 (13%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+FFMA+DGVAPRAKMNQQR RRF SA+ A KA E GE +P+E RFDSNCITPG
Sbjct: 77 PQKVFFMAVDGVAPRAKMNQQRARRFMSARTAHTQLAKALENGEIMPSEARFDSNCITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RLHQ+L ++K K TD W+ +ILSGH PGEGEHKIMD+IR
Sbjct: 137 TYFMTRLHQKLDDWIKTKSATDSRWQGRK---------IILSGHNVPGEGEHKIMDFIRT 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVT-PEE 316
++ Y+PN RHC+YGLDADLIMLG+ +HEP+FSLLREEV FNT+ K ++ P+
Sbjct: 188 ERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLREEVTFNTRPRKNDNKATKKPKR 247
Query: 317 T-----KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPN 371
T KF LLHLSL+R+YL EF +K+ L F + +E I+DDW+L+G L+GNDF+P+
Sbjct: 248 TDSDVKKFHLLHLSLLREYLAWEFADVKDS--LPFEYEMERIVDDWILLGLLVGNDFLPH 305
Query: 372 LPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYA 431
LP++HI + ALPLLY Y++VLPTLDGYINE GYLNL RFE FL +LA D F E+
Sbjct: 306 LPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFEAFLAELALNDKTSFMERLE 365
Query: 432 DIQYLEGK-----------------MGKKFSDVFHK---EKSK--------EMDPDLAAL 463
D Q++E K + + SDV + E+SK E D D AA
Sbjct: 366 DEQFMESKRIRVVDPEQQELAEPELVAFESSDVEDEAGAEESKDEAGGAGAEDDEDDAAF 425
Query: 464 IKATDDDYDD-----GTEEVLNYANYEEYYYSDE--------------------DEE--W 496
+ ++D DD G++E+L +N + DE D E W
Sbjct: 426 VSDHEEDGDDLEPGSGSDELL-LSNLDAQLLEDEFNDELATLALSGMNDADFANDVEACW 484
Query: 497 RTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYP 556
++F +HK YY KL Y ++ + LR+QAE Y+RAIQWNLHYYY+GCVSWSW+YP
Sbjct: 485 TKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYVRAIQWNLHYYYHGCVSWSWFYP 544
Query: 557 HHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLE--NSP 614
HHYAP+ISD++ F + +++E+ EPF PF+QLLAVLP AS + LP P + LM+ + SP
Sbjct: 545 HHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPEASADCLPRPLRELMSSDPAKSP 604
Query: 615 ILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLV 674
I ++YP F TDLNGK+ +WEAVVLIPFI+E +L++A++A LT EE +RN HG +
Sbjct: 605 ICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAKRSRLTSEENARNSHGSHIQ 664
Query: 675 YTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFP 734
S P+ + + V + +D + ++++ GL +V + +Y FP
Sbjct: 665 CISS---------PEPPNSQGQWRTVRSEIPQDSFRIPRSQVKWGLLPNVKMDVYFPGFP 715
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHL 793
T+KH+ ++ A +F SR ES+++ V+++ + ++ ++ + + I++P L
Sbjct: 716 TMKHLSHLGELRFANCNIFGMASRKESMVLKVENERAHTDIIELGSELCDEEVCIDWPIL 775
Query: 794 IEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEV 853
++ ++ D +I + + + +++ + +Q +T+ T+ ++I
Sbjct: 776 KVAKIDSIWGGDDKIVRKCDDEIIVKDMSEEEKRQWQAHANQLTEHLMTRFAIEIA---- 831
Query: 854 LVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQS-----AVLNL-------QQARES 901
Q K+ R V R F + + Y Q +VL QQ
Sbjct: 832 ---AQKDSKGKHI---RPAVAWVRKF--TGLVYEAQGGGKEPSVLKACKQWSSPQQLMPV 883
Query: 902 LEYKTIDEIF---------------YPGCQCFALSNPH---YGSGGCVISTVKEENSFIK 943
L + ++ YP +++P +G G V E+++ +
Sbjct: 884 LLPLVVKDVLLENSRVLADLPMKQAYPKQSIVWITDPKFALFGMPGMVNGFSNEKSADCR 943
Query: 944 ---LSFKVQQEPD-LSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
+ Q + D + L + ++ Y A + + L +R TG++F+ +
Sbjct: 944 IEVIGMSTQNKVDKMEALRKKMEQKSLRWMGGYDCARQCQVDTRLFARITGTMFLWNEPR 1003
Query: 1000 EGAKRH----------NIGLNIKFSRKNEEVVGFTRRDE-------TTKKWFYTEQVVTL 1042
E ++ N GL +K+SR++ V +T R E T K WFYT L
Sbjct: 1004 ERVEKGQQISSSDSKINCGLALKYSRRDLCVADYTDRTEHTNQRGVTNKVWFYTNLATRL 1063
Query: 1043 IKNYMKQFPEVFGFLKD---HSSDDIYLRDDVFPHQG--EQRVAQIVSWLKEQPHAKAEV 1097
+ Y ++FP+V+ +L+ DD+Y +D++ ++ E+R ++ +L P +AE
Sbjct: 1064 VSEYRRKFPDVWKYLETIGLTQQDDVYYTEDIWSNEKTREKRFGELSEFLGGLPSLEAEQ 1123
Query: 1098 RPCGAAVVDAKVVSLIEHAVDTCEKVEKQITL---FVKPNKLYIPKPTLDKLCPDPDTKF 1154
CG D ++++ IE + E EK+ + + P L+ + K+ DP F
Sbjct: 1124 LKCGTVYADRQLITEIEMIL--AEPDEKKPVMNKYMMAPGALFRYELYNGKVHADPAADF 1181
Query: 1155 KLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCS-ESRGY 1213
++ DRV + VP +GT++GI +D DV FDKPF G K+R S E+
Sbjct: 1182 QILDRVALMSSDTKVPKTTQGTVVGI------HDDKIDVFFDKPFDGGQKVRGSNEAAAI 1235
Query: 1214 RMPAQAMINLSYG 1226
R+P A++N+++G
Sbjct: 1236 RVPQSALLNVTFG 1248
Score = 204 bits (518), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 111/144 (77%), Gaps = 4/144 (2%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ SERYPCLSEV+ E QIPEFDNLYLDMNGIIHNCSHPND+D FRITE +I
Sbjct: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F +IF YIE L+ +I+P+K+FFMA+DGVAPRAKMNQQR RRF SA+ A KA E GE
Sbjct: 61 FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFMSARTAHTQLAKALENGE 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFM 144
+P+E RFD C +FM
Sbjct: 121 IMPSEARFD----SNCITPGTYFM 140
>gi|308480687|ref|XP_003102550.1| CRE-XRN-1 protein [Caenorhabditis remanei]
gi|308261282|gb|EFP05235.1| CRE-XRN-1 protein [Caenorhabditis remanei]
Length = 1668
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/1204 (34%), Positives = 644/1204 (53%), Gaps = 152/1204 (12%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+FFMA+DGVAPRAKMNQQR RRF SA+ A +KA GE LPTEKRFDSNCITPG
Sbjct: 77 PQKVFFMAVDGVAPRAKMNQQRARRFMSARTANSQMEKAIANGEILPTEKRFDSNCITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RLH +L ++K K +D W+ +ILSGH PGEGEHKIMD+IR
Sbjct: 137 TYFMTRLHNKLDEWIKKKSASDSHWQGRK---------IILSGHNVPGEGEHKIMDFIRT 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
++K Y+PN RHC+YGLDADLIMLG+ +HEP+FSLLREEV FN++ K + P+ T
Sbjct: 188 ERAKSGYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLREEVTFNSRPRKNEQKNKKPKRT 247
Query: 318 K-----FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
F LLHLSL+R+YL EF +KE L F + +E I+DDW++MG L+GNDF+P+L
Sbjct: 248 DSDVKTFHLLHLSLLREYLAWEFADVKES--LPFAYDMERIVDDWIMMGLLVGNDFLPHL 305
Query: 373 PDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
P +HI + ALPLLY Y++VLPTLDGYINE GYLNL RFEKFL +L+ D F +K D
Sbjct: 306 PSIHIHDDALPLLYSTYKKVLPTLDGYINESGYLNLARFEKFLEQLSLNDKNSFMDKLED 365
Query: 433 IQYLEG-KMGKKFSDVFHKEKSKEMDPDLAAL----IKATDDDYDDGTEEVLNYANYEEY 487
Q++E K+ +D+F + +E +L A I++ +D DD E + +
Sbjct: 366 EQFMESKKLRPSQNDIFQEASVEE---ELVAFESSDIESDAEDKDDEKNETDENGDDDAA 422
Query: 488 YYSDEDEE--------------------------------------------------WR 497
+ SD +EE W
Sbjct: 423 FVSDHEEENESEDKLSGKELSSENSDDVLLEEEFNDELATLALSGMDDADFANNVEACWT 482
Query: 498 TNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPH 557
++F +HK YY KL Y ++ LR QAE Y+RAIQWNLHYYY+GCVSWSW+YPH
Sbjct: 483 KTLDNQFKRHKKSYYSNKLRYKNISKTELRAQAEGYVRAIQWNLHYYYHGCVSWSWFYPH 542
Query: 558 HYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLE--NSPI 615
HYAP+ISD++ F+++ +++E+ +PF PF+QLLAVLP AS + LP+P Q LM+ + S I
Sbjct: 543 HYAPFISDVRGFANMKIEFELSQPFHPFEQLLAVLPEASADCLPKPLQELMSSDPTKSMI 602
Query: 616 LEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
++YP F TDLNGK+ DWEAVVLIPFI+E +L++A+++ + L+ EE RN HG +
Sbjct: 603 HDFYPANFETDLNGKRNDWEAVVLIPFIEEKRLLEAIESKRNRLSREENMRNTHGCHIEC 662
Query: 676 TYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN-KLRKGLCQDVNLKLYVTHFP 734
+ + G +V + +IY P +++ GL +V + +Y FP
Sbjct: 663 ISTRQDDG-------------QWSVIRSELPQEIYRIPKEQVKWGLLPNVKMDVYFPGFP 709
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHL 793
T+KH+ + +++ A +F SR ES+++ V+++ + + ++ + + I++P L
Sbjct: 710 TMKHLSHSGQLKFANCNIFGMASRKESMVLKVENEKSEKDIIEWGSELCDEEVCIDWPIL 769
Query: 794 IEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDA----FQLSKKSITDGYYTKLGVDIG 849
+V ++ + +I K G E KDM + +Q +T+ ++ ++I
Sbjct: 770 KLAKVDSIWGGEDKI-VRKLPGDD-EIIVKDMNEEEKRQWQAYVNQLTERLMSRYAIEIA 827
Query: 850 ---NTEVLVYGQPVESRKYFFG-------------PRGKVTQQRTFIRSTVTYAYQSAVL 893
+++ P+ + F G P K +Q + ++ + V
Sbjct: 828 GQKDSKGKHIRPPIAWVRKFTGLVYETKEGEDGSAPTLKAVKQWSSPQTLIPVLLPLVVK 887
Query: 894 NLQQARESLEYKTIDEIFYPGCQCFALSNPH---YGSGGCVISTVKEENSFIKLSFKVQQ 950
++ L I YP +++ YG G V E+ S ++ V
Sbjct: 888 DVLLENARLLADLPVPIAYPQQSVVWITDTRVALYGMPGMVGGYRNEKTSNCQVDV-VGM 946
Query: 951 EPD-----LSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDS----TEEG 1001
D + +L D ++ Y A + + L +R TG++F+ + E+G
Sbjct: 947 VSDNRIAVMEELRKQVDQKSLRWMAGYDCARQCQVDVRLFARITGTMFLWNEPRARVEKG 1006
Query: 1002 AK-----RHNIGLNIKFSRKNEEVVGFTRRDE-------TTKKWFYTEQVVTLIKNYMKQ 1049
+ + N GL +KFS+++ V +T R E TT+ W YT LI Y K+
Sbjct: 1007 QQLSSDSKINCGLCLKFSKRDMCVADYTDRTEHTNHKGMTTRVWSYTNLTCRLITEYKKK 1066
Query: 1050 FPEVFGFLKDHSS---DDIYLRDDVFPHQ-GEQRVAQIVSWLKEQPHAKAEVRPCGAAVV 1105
FPE++ L+ SS DD+Y +D++ + + R ++ +L P AE CG V
Sbjct: 1067 FPELWRHLESASSTQMDDVYYAEDIWAEKVRDHRFGELKEFLDNLPSRDAEQLKCGTVYV 1126
Query: 1106 DAKVVSLIEHAVDTCEKVEKQIT--LFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNI 1163
D ++++ +E + + + V+K + +V P+ L+ + K+ D + +F + DRV +
Sbjct: 1127 DRQMITEVEKVI-SADPVKKPVMGRFYVSPSILFRYELYDGKVQADSEVEFLILDRVSIM 1185
Query: 1164 RDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSE-SRGYRMPAQAMIN 1222
VP +GT++GI +D DV+FD+ + G K+R S + +R+P A+ N
Sbjct: 1186 SSDTKVPKVVQGTVVGI------HDDKIDVLFDREYEGGSKVRGSRLTSAFRVPRTALFN 1239
Query: 1223 LSYG 1226
+++G
Sbjct: 1240 ITFG 1243
Score = 207 bits (526), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 97/145 (66%), Positives = 113/145 (77%), Gaps = 4/145 (2%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ SERYPCLSEV+ E QIPEFDNLYLDMNGIIHNCSHPND+D FRITE++I
Sbjct: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEEEI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F +IF YIE L+ +I+P+K+FFMA+DGVAPRAKMNQQR RRF SA+ A +KA GE
Sbjct: 61 FINIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFMSARTANSQMEKAIANGE 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMA 145
LPTEKRFD C +FM
Sbjct: 121 ILPTEKRFD----SNCITPGTYFMT 141
>gi|74210743|dbj|BAE25024.1| unnamed protein product [Mus musculus]
Length = 778
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/710 (50%), Positives = 469/710 (66%), Gaps = 60/710 (8%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGH+TPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHDTPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KP ++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPGHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSALKEK--ITFKYDIEKIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFE++L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF--------------HKEKSKEMDPDLAALIK------ATDDD 470
D+++ E K+G K+ + K K +E AAL K A+ D+
Sbjct: 356 VDLKWFESKVGNKYLNEAAGAAAEEAKNCKEKRKPKGQENSLSWAALDKSEGEGVASRDN 415
Query: 471 YDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQA 530
++D TE D+D F +EF Q+K YY K+ V++E L +QA
Sbjct: 416 FEDETE--------------DDDL-----FETEFRQYKRTYYMTKMGVDVVSDEFLANQA 456
Query: 531 ECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLA 590
CY++AIQW LHYYY+G SWSWYYP+HYAP++SDI+ S L + +E+G+PF PF+QLLA
Sbjct: 457 ACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLA 516
Query: 591 VLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIK 650
VLP+ASK LLP YQ+LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++
Sbjct: 517 VLPSASKNLLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLE 576
Query: 651 AMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALA--PDYFPAINENHAVEKPLYRDD 708
AM+ H L EER RN+H L+ Y T + P+ FPAI K + D
Sbjct: 577 AMETCNHSLKKEERKRNQHSECLMCWYDRDTEFTYSSPWPEKFPAIERCCTRYKMISLDA 636
Query: 709 IYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII---V 765
V NK + + + LY FPTLKH++ ++ + V+VFQQ SR E++++ V
Sbjct: 637 WRVDINKNK--ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENLMLEISV 694
Query: 766 QDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSG 815
+ ++ +A +LGK +F+N+PHL E RV AV+ +++ ++ G
Sbjct: 695 NAEPDELRIENIASAVLGKAVFVNWPHLEEARVVAVSDGETKFYIEEPPG 744
Score = 230 bits (587), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|313230942|emb|CBY18940.1| unnamed protein product [Oikopleura dioica]
Length = 1623
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/1149 (36%), Positives = 612/1149 (53%), Gaps = 85/1149 (7%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+FFMA+DGVAPRAKMNQQR RRFRSAKEAE E+KAKEKGE LPTE +FDSN ITPG
Sbjct: 77 PRKVFFMAVDGVAPRAKMNQQRSRRFRSAKEAEENERKAKEKGESLPTEGKFDSNVITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL +QLRYF++ KIT D W+ + V LSGHETPGEGEHKIM+YIRY
Sbjct: 137 TGFMVRLDKQLRYFIQNKITHDD---------AWRGITVFLSGHETPGEGEHKIMEYIRY 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNK----------G 307
++ D++P RHCLYGLDADLIMLGL THEP FSLLREE++F +K
Sbjct: 188 QRTLSDHDPRTRHCLYGLDADLIMLGLATHEPNFSLLREEIQFTKAKDKMIIVFIPYRSA 247
Query: 308 GSQIVTPEETKFFLLHLSLMRDYLELEFGKL-------KEPGVLSFPFSIENIIDDWVLM 360
G Q PE+ F LLHLS+MRDY+ EF L K G + + +E +IDDWVLM
Sbjct: 248 GRQ-NRPEDITFHLLHLSVMRDYIHHEFKDLRTSLASRKSSGDIEIEYDLERLIDDWVLM 306
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
GFL+GNDF+P+LP++ I LP+LYK Y +V+P L Y+ E G ++L E+F L+
Sbjct: 307 GFLVGNDFVPHLPNMQIKQDHLPVLYKSYSKVVPKLGKYLTERGKIDLDVLEEFFFVLSE 366
Query: 421 FDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
+ EQF AD +YL GK + H +K+ D A ++ +D DG +
Sbjct: 367 NEREQFENSQADDKYLAGK--RSMMKESHGKKAAAHDELEALALEQEEDGKFDGDIAQGD 424
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
+ S + W EF ++ YYH K + ++T E Y+RA+QW
Sbjct: 425 LIPIDPRELSTDFGVWDDVTKQEFVDYRNGYYHSKFN-KRLTKEFQYTMKNEYVRALQWI 483
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAAS-KEL 599
+HYYYNG SW WY+P HY+P++SD+ NLKY+ G+PFLPF+QLLAVLPA+S K
Sbjct: 484 MHYYYNGVQSWGWYFPFHYSPFLSDMVKLKECNLKYDYGKPFLPFEQLLAVLPASSGKVA 543
Query: 600 LPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLL 659
LPE + +LM S I+++YP EF TDLNGK QDWEAVVLIPFIDE +L +AM L
Sbjct: 544 LPEVFHSLMDSPTSSIIDFYPTEFETDLNGKMQDWEAVVLIPFIDENRLYEAMQPALAKL 603
Query: 660 TDEERSRNRHGPMLVYTYSNVNLG---TALAPDYFPAIN--ENHAVEKPLYRDDIYVHPN 714
+ ++ RN H P V+ Y + P+ FP + + E P + +
Sbjct: 604 SPFDKCRNIHSPCNVFEYDAKTEPYHYPSPIPESFPHLEACRSKISEVPTHEGIWKLDLE 663
Query: 715 KLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDK------ 768
+R GL + +++L FPTL HV+ ++E VK+F SR E++++ K
Sbjct: 664 AVRYGLLRP-SMELLRPGFPTLFHVEHKTELERNGVKIFSMASRGENMMLFIGKHLPDSN 722
Query: 769 --VQVP-SLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDM 825
VP +++++ LGK + + +PH +V V++ R F D
Sbjct: 723 WCKNVPKTMQEMCKIWLGKNVAVGWPHCYAAKVVEVSSAKHRAYFKTTDDRKNVVGISDN 782
Query: 826 QD-AFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFF-GPRGKVTQQRTFIRST 883
F+ + + + + G+ +G TE L++ +P+ RK + G + KV ++ F
Sbjct: 783 NKLGFEQQRDIVEEALKARWGIALGETEYLIHAKPLIGRKVVYSGSKPKV--EKVFGDVQ 840
Query: 884 VTYAYQSAVLNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIK 943
V Y Q+ V +L + + + +F + F LS YG +TVK N
Sbjct: 841 V-YPLQTCVRDLVTDEPMKKVQDVAGLFTEDKRVFCLSPKFYGCS----ATVKGINDDGL 895
Query: 944 LSFKVQQEPDLSDLVHLQD---DTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEE 1000
+S +V Q + Q D + + A IS ++SR TG F I+ E
Sbjct: 896 VSVEVTQHEHIDVESARQSATPDGELQWFQGWRAAQATGISSYMVSRITGH-FSINMPGE 954
Query: 1001 GAKRHNIGLNIKFSR-KNEEVVGFTRRDETTK------KWFYTEQVVTLIKNYM--KQFP 1051
+R NIGLN++ ++ K E G+T R E +W Y+ ++ + Y+ +
Sbjct: 955 KNQRRNIGLNLRSNKGKGMEAPGYTMRKEEGDNQNNRIEWLYSSALIDCLNKYIVFDRLH 1014
Query: 1052 EVF--GFLKDHSSDDIYLRDDVFPHQG--EQRVAQIVSWLKEQPHAKAEVRPCGAAVVDA 1107
+ F G +++SS +I D+FP + + ++ ++K +K+ CG +
Sbjct: 1015 DKFDAGDGRNNSSVEI-TGSDIFPDSDNVNKDIDELCKFIKTLQCSKSPTVECGIERLSK 1073
Query: 1108 KVVSLIEHAVDTCEKVEKQITL--FVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRD 1165
+ + VD + E ++ + P LY + + PD TKF L+DRVVN R
Sbjct: 1074 IEIDALVKLVDHVKANETKVIVKKNFSPKALYANIEGVGRTDPDGKTKFSLWDRVVNCRG 1133
Query: 1166 CYTVPLGYRGTIIGIVQ--------GETSYDAMYDVVFDKPFPHGVKIR--CSESRGYRM 1215
VPLG++GT+IG + G + M +V++DKPF G + C RGYR+
Sbjct: 1134 DTAVPLGWQGTVIGTIPEQAATTGVGSSIQSPMCNVLWDKPFMGGSNLNGLCPPRRGYRL 1193
Query: 1216 PAQAMINLS 1224
P ++NL+
Sbjct: 1194 PQFCLLNLN 1202
Score = 239 bits (610), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 106/129 (82%), Positives = 122/129 (94%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+RY+SERYPCLS+V++E+QIPEFDNLYLDMNGIIH CSHPND+DPHFRITE+QI
Sbjct: 1 MGVPKFYRYMSERYPCLSQVIKEHQIPEFDNLYLDMNGIIHPCSHPNDDDPHFRITEEQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F+DIFHYIE LFR+I+P+K+FFMA+DGVAPRAKMNQQR RRFRSAKEAE E+KAKEKGE
Sbjct: 61 FKDIFHYIECLFRIIRPRKVFFMAVDGVAPRAKMNQQRSRRFRSAKEAEENERKAKEKGE 120
Query: 121 RLPTEKRFD 129
LPTE +FD
Sbjct: 121 SLPTEGKFD 129
>gi|310794358|gb|EFQ29819.1| XRN 5'-3' exonuclease [Glomerella graminicola M1.001]
Length = 1407
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/1346 (34%), Positives = 678/1346 (50%), Gaps = 227/1346 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDN-DPHFRITEKQ 59
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + D FR++E++
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDTGEDTTFRLSEEE 60
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+F IF+YIE LF I+PK+LFFMAIDGVAPRAKMNQQR RRFR+A + E KA +G
Sbjct: 61 MFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARRFRTALDTEKARDKAISEG 120
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 179
+P E FD C FM AK+ QQ
Sbjct: 121 VEMPKEPPFD----SNCITPGTEFM--------AKLTQQ--------------------- 147
Query: 180 GERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VIL 238
L+YFV K++ D W+ C ++L
Sbjct: 148 ----------------------------LKYFVNKKVSEDADWQG----------CEIVL 169
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++PDY+ N+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 170 SGHEVPGEGEHKIMEYIRNAKAQPDYDSNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 229
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F S ++ E F+LLHL ++R+YLELEF +LKEPG LSFPF +E +IDD++
Sbjct: 230 TFGRVSKAKTREL---EHQNFYLLHLCIVREYLELEFQELKEPGRLSFPFDLERVIDDFI 286
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP LHI GAL ++++Y+ VLP DGYINEGG +NL R ++ L +L
Sbjct: 287 LMAFFVGNDFLPNLPRLHINEGALAAMFRIYKSVLPLGDGYINEGGVINLPRLQRLLNEL 346
Query: 419 ASFDFEQFREKYADIQYLEGK-------------MGKKF------SDVFHKE-----KSK 454
A + QF +D ++ + K GK D++ + K
Sbjct: 347 AKDETNQFEHDVSDEKWFQSKKLLESNGADNKKPKGKGLVLTSSQRDLWKQRIRPYVKKP 406
Query: 455 EMDP-DLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFS----------E 503
+P DL + A D + + L+ E+ ++DE R S E
Sbjct: 407 SSEPLDLGTSLNAADRKFVQDLADTLHI----EWSTKEDDEGHRHLLLSFPKGAENVNDE 462
Query: 504 FGQHKTDYYHYKLDYAKVT------NEVLRDQAECYIRAIQ-WNLHYY------------ 544
+ Y +Y K T + R E Y + Q W YY
Sbjct: 463 EEEGTLALYRVMRNYDKATVVDVGGEDAQRQYKELYDQKYQGWKTKYYLQKFPEWAPEQY 522
Query: 545 ----------YNGCVSWSWYY------------PHHYAPYISDIKDFSHLNLKYEMGEPF 582
Y + W YY +HY+P SD+ +L +++G+PF
Sbjct: 523 ETELTKLCENYVQGLQWVLYYYYRGIASWPWFYQYHYSPLTSDVTRGLGADLNFKLGQPF 582
Query: 583 LPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPF 642
PF+QL+ VLP SK ++PE Y +LMT NSPI ++YP +F D+NGKK +WEAVV IPF
Sbjct: 583 RPFEQLMGVLPDRSKSIVPEVYWDLMTNPNSPIYDFYPRDFELDMNGKKMEWEAVVKIPF 642
Query: 643 IDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---NVNLGTALAPDYFPAINENHA 699
IDE +L+ AM+ LL++ ++ RN G L +TY+ N ++LA FP IN
Sbjct: 643 IDEKRLLSAMEPKNKLLSEGQKERNGFGVALKFTYNPDIAFNYPSSLA-GIFPDINPCRC 701
Query: 700 VEKPLYRDDIYVHPN----KLRKGLCQDVNLKL-YVTHFPTLKHVQFTHK-IENAKVKVF 753
VE +I+ P+ R GL V + + + FPTL + +T +EN V VF
Sbjct: 702 VE------NIFELPSTDGLTYRNGLVDGVKINIEALAGFPTLHTLSYTAMLVENFGVNVF 755
Query: 754 QQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKN 813
Q S+N S+I+ ++ + Q A Q LGK F+ YP L E ++ V + D+N
Sbjct: 756 QADSKNPSMIVTLTDAEMRTRVQSAAQRLGKRCFVGYPFLQEAKIVKVTDELFDYELDRN 815
Query: 814 SGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKV 873
V + D F I + + +LG+ IG+ E LV+ + + G +
Sbjct: 816 GSVVQKHHGPKEIDFFSKESTYIENWHSKRLGIVIGSVESLVHVHML--KGLIKTEEGAL 873
Query: 874 TQQRTF---IRSTVTYAYQSAVLNLQQARESLEYKT---IDEIFYPGCQCFALSNPHYGS 927
++ +RS YA Q+ V + E K I+E + G Q F L +YG
Sbjct: 874 IKEYALNPSMRS--VYASQTIVDEVINEDERFIEKAAVPIEEEYPIGTQAFFLGEYNYGR 931
Query: 928 GGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYN-YLPSYTVASKLSISPLLLS 986
V V + + I++S +EPD + + +QD N Y PSY VA L++ PL+LS
Sbjct: 932 ALEVTGHVNNKAN-IRVSVLKHKEPDFAKPI-IQDMKRQNRYTPSYAVAKMLNLHPLILS 989
Query: 987 RFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNY 1046
+ S + +++ G R N+GLN+KF K ++V+G++++ ++ W ++ + L+ Y
Sbjct: 990 KILSS-YQVNTV--GGLRVNLGLNLKFDAKKQKVLGYSQKSDSG--WEFSNAAIELLARY 1044
Query: 1047 MKQFPEVFGFLK------DHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPC 1100
+ FP+ F ++ D S D++ +D P QRV +I +WLK +K E P
Sbjct: 1045 VAAFPDFFAAIQQNPQASDVSDTDLW-KD---PKVAAQRVKEIGAWLKAAQTSKFERVPL 1100
Query: 1101 GAAVVDAKVVS----------LIEHAVDTCEKVEKQITLFVKPN--KLYIPKPTLDKLCP 1148
A +D+ VV L H VD + +KP+ +L++
Sbjct: 1101 EAEQLDSVVVMKLAEAGAQVFLQSHDVDVVNMKGVPRSAIMKPSDAELFL---------- 1150
Query: 1149 DPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--R 1206
+ KF L DRV + VPLG RGT++G+ + T+ + + D+V+D F G + R
Sbjct: 1151 -SNQKFALGDRVSFLSSSGKVPLGSRGTVVGLSR--TATNLLLDIVWDLTFMSGTTLGER 1207
Query: 1207 CSESRGYRMPAQAMINLSYGERLCGN 1232
RG + + +++N +Y + + G+
Sbjct: 1208 APPFRGMTVASSSVLNTTYKQVVSGS 1233
>gi|50549393|ref|XP_502167.1| YALI0C23144p [Yarrowia lipolytica]
gi|49648034|emb|CAG82487.1| YALI0C23144p [Yarrowia lipolytica CLIB122]
Length = 1526
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/1367 (33%), Positives = 671/1367 (49%), Gaps = 222/1367 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P +S+ V + QIPE+DNLYLDMN I+H C+H D D F++TE
Sbjct: 1 MGIPKFFRYISERWPLISQQVIDTQIPEYDNLYLDMNSILHVCTH-KDADVTFQLTE--- 56
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
E +FR I
Sbjct: 57 --------EQMFRAI--------------------------------------------- 63
Query: 121 RLPTEKRFDFITLKFC--FPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PKKLFFMAIDGVAPRAKMNQQR RRFR+A +AE + KA E
Sbjct: 64 -------FEYIEHLFSKIRPKKLFFMAIDGVAPRAKMNQQRSRRFRTALDAEKAKAKALE 116
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G L E +FDSN ITPGT FM +L QL YFV K++ D W+++ ++L
Sbjct: 117 EGTIL-KEDQFDSNAITPGTEFMEKLTTQLNYFVHKKVSEDA---------DWQNIDIVL 166
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKI + IR K++PDY+PN RHC+YGLDADLIMLGL +H+P+FSLLREEV
Sbjct: 167 SGHEVPGEGEHKINECIRINKAQPDYDPNTRHCVYGLDADLIMLGLGSHDPHFSLLREEV 226
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F + + G + + EE F+LLH+SL+R+YLELEF L + +SFP+ E I+DD++
Sbjct: 227 VFGPR--RAGPKAL--EEQNFYLLHISLLREYLELEFQDLADE--ISFPYDFERILDDYI 280
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
L+ F +GNDF+PNLP +HI + L ++Y++V+ DGYIN+ G +NL+R + FL ++
Sbjct: 281 LLFFFVGNDFLPNLPQIHINEDSHALFVELYKKVMKISDGYINDRGNINLQRLDLFLAEM 340
Query: 419 ASFDFEQFREKYADIQYL-----------EGKMGKK-----------------FSDVFHK 450
F+ F E+ D+ ++ + K G+K F D K
Sbjct: 341 EKFEIGIFEEQAIDLAWINKDLPELTQKYKSKRGEKLYLSPQQKELVVQKLRPFVDAHLK 400
Query: 451 EKSK-EMDPD-------------LAALIKATDDDYD-----DGTEEVLNYANYEEYYYSD 491
KSK + DPD +L+K D D + + + +Y+ +
Sbjct: 401 NKSKSDYDPDNLPEIVFDTLSEECESLVKEISLDLDCRFLKNSSTSCMLIVDYDGLRDEE 460
Query: 492 EDEEWRTNFFS----------------------------EFGQHKTDYYHYKLDYAKVTN 523
EE F +F + K DYY K ++ T+
Sbjct: 461 SPEEATQRFIGYSQTLKRYEAAPVKTAEALAQREEIYNQKFEEWKDDYYKKKFGWSTTTD 520
Query: 524 EV---LRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGE 580
E L+ E Y+ +QW LHYYY+G SWSWYY +HYAP +SD++ NLK++ G+
Sbjct: 521 EGKAELKALTENYVEGLQWILHYYYDGVPSWSWYYGYHYAPRVSDVRKGLQANLKFKAGQ 580
Query: 581 PFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLI 640
PF PFQQL+ VLP SK+LLP+ Y LM NSPI ++YP +F D NGKK DWEAVV I
Sbjct: 581 PFKPFQQLMGVLPERSKKLLPQAYWPLMADSNSPIYDFYPNDFELDKNGKKADWEAVVKI 640
Query: 641 PFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINEN--- 697
PF+DE +L+ AM E LT E RN G L++ YS + P P + +N
Sbjct: 641 PFVDESRLLTAMATKETGLTAGENKRNAFGNNLLFKYSPQQ--DYVYPSSMPGVFQNLEH 698
Query: 698 -HAV----EKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKV 752
H V + P V K +D+ ++ FP+LK + +T+ IE A V++
Sbjct: 699 CHCVVEKFDLPSMDGLDVVIGKKDGSKWGKDM-----LSGFPSLKTLPYTYDIEAAGVRI 753
Query: 753 FQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFD 811
FQQ SRN ++++ + + + S + +A +++ ++I++NYP+L E +V +A D S+
Sbjct: 754 FQQDSRNNTLVLNIINSYKNRSPESIARELMDQSIYVNYPYLREAKV--IAVSDELFSYT 811
Query: 812 KNSGPVFERAAKD-MQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPR 870
+G V + D M + + I + Y K G+ GN V+++ + + K G
Sbjct: 812 FENGKVNKSPHSDTMAKEWATGSRKIKNDYIKKQGIKSGNIFVVLHVRFLAGMKK--GDD 869
Query: 871 GKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKTIDEI---FYPGCQCFALSNPHYGS 927
G + + F +T ++ Q+ V + E + + I F + +S+ YG+
Sbjct: 870 GSLV--KDFTGATGSFPVQTIVEKVVNEDERYKERAAQPIAAEFPLESRVILMSDFCYGA 927
Query: 928 GGCVISTVKEENSFIKLSFKVQQEP-----DLSDLVHLQDDTVYNYLPSYTVASKLSISP 982
V++ + +++ P D+ + + Y PSY A I
Sbjct: 928 EAQVVNHIGNTKMDLQVKKSAPNSPAVVLADVGKKIARTEYATTKYYPSYQAAKMAGIQS 987
Query: 983 LLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTL 1042
LL R I ++G + ++GLN++ K E+V+G+TRR T + W YT+ + L
Sbjct: 988 SLLGRICSKCLI----QKGDSKIDVGLNLRNEGKREKVLGYTRR--TQQGWEYTQDAIAL 1041
Query: 1043 IKNYMKQFP---EVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRP 1099
+K+Y FP E G +D DI P + + + WLKE V
Sbjct: 1042 VKSYYNTFPKLVEGIGSNRDKGVPDISALVKGEPAEVNKMLESARRWLKENASRLTSVD- 1100
Query: 1100 CGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDP------DTK 1153
+ K +S++E+ + + F+ P+ + L PD +
Sbjct: 1101 IDTQSLSVKSISVLENYL-VKNAADPDAVRFIPSVVKGTPRQAV--LRPDEAFHQLRGQR 1157
Query: 1154 FKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHG--VKIRCSESR 1211
F L DRVV ++D + +GT+IGI D DV+FD F G + R S +R
Sbjct: 1158 FDLGDRVVYVQDSGKAAIFSQGTVIGI--KAVGVDVRLDVLFDDEFVGGNNFQGRASTNR 1215
Query: 1212 GYRMPAQAMINLS--------YGERLCGNSNPHVKNINVMQSRGERN 1250
G + A +INL+ G G +N N +RG N
Sbjct: 1216 GLNVAANTVINLTNRQMMYRPKGGNRGGKANGQQTNGKTNNARGRNN 1262
>gi|320169726|gb|EFW46625.1| Dhm2 protein [Capsaspora owczarzaki ATCC 30864]
Length = 1615
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/1192 (35%), Positives = 624/1192 (52%), Gaps = 155/1192 (13%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P++ FFMA+DGVAPRAKMNQQR RRFRSAKE E +A+ G+ +P + FDSNCITPG
Sbjct: 42 PQRTFFMAVDGVAPRAKMNQQRARRFRSAKENESKLAEARRSGKPIPETEPFDSNCITPG 101
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L QL+YF+ KITTD+ W++V VILSGHE PGEGEHKIM+Y+R
Sbjct: 102 TAFMSKLSVQLKYFISRKITTDR---------AWRNVEVILSGHEIPGEGEHKIMEYVRT 152
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNT-----KSNK-GGSQI 311
KS P Y+PN RHCLYGLDADL++LGL +HEP F LLREEVKF +S K GG+
Sbjct: 153 QKSLPGYDPNTRHCLYGLDADLMILGLASHEPQFCLLREEVKFGGGKKGPQSKKTGGADA 212
Query: 312 VTPEETKFFLLHLSLMRDYLELEF------GKLKEPGVLS------------FPFSIENI 353
+T FFLLHLSL+R+YLE+EF + + L+ F++E++
Sbjct: 213 IT-----FFLLHLSLLREYLEVEFRPAFDMAQAEYKAALAALPAGTPAPPAPLVFNLESV 267
Query: 354 IDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEK 413
IDDWVLMG+LIGNDFIP+LP LHI GA LYKVY E++P Y+N G ++L
Sbjct: 268 IDDWVLMGYLIGNDFIPHLPHLHIDTGAWEYLYKVYGEIVPKQQSYLNINGRIHLP---- 323
Query: 414 FLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDD 473
FE F E+ + + D+F +E + DL L T +
Sbjct: 324 --------TFELFMERLSRFDF----------DIF-----QESNADLKYLHGKTRGGHSG 360
Query: 474 GTEEVLNYANYEEYYY-----SDEDEEWRT-NFFSEFGQHKTDYYHYKLDYAKVTNEVLR 527
+ D E R + FG + D D +
Sbjct: 361 RGGRGGHSRRGGNRGGESGPSGDSRPESRAEDGLGFFGAQEAD------DTLVAEMNAVE 414
Query: 528 DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQ 587
D+ ++ + N + W WYYP HY+PY SD++ FSHL++++E+G+PF PFQQ
Sbjct: 415 DR----LKRLGINTGAEFFADTPWGWYYPFHYSPYASDLRGFSHLHIEFELGKPFRPFQQ 470
Query: 588 LLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVK 647
LL VLPAASK LLP Y LMT SP+++ YP +F +DLNGKK +WEAV+LIPFIDE +
Sbjct: 471 LLGVLPAASKHLLPPVYHELMTSPMSPVIDLYPLDFESDLNGKKNEWEAVILIPFIDEKR 530
Query: 648 LIKAMDAVEHLLTDEERSRNRHGPMLVYTY--SNVNLGTALAPDYFPAINENHA---VEK 702
L+ AM + L EER+RNR+G L + + S L + P FP +N HA V
Sbjct: 531 LLAAMKPFDARLNAEERARNRYGQELSFRFDKSVSYLLESTLPASFPPVNPCHAKVTVLS 590
Query: 703 PLYRDDIYVHPN----KLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQ-QPS 757
DD P+ LR+GL + V + L+ H + + + ++ ++E A + +FQ QP+
Sbjct: 591 GSNGDDEDWKPHVLSVPLRRGLAEGVRMDLFGLH--SFRRLHYSARLELANLTIFQGQPT 648
Query: 758 RNESIIIVQDK----VQVPS-LKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDK 812
+ ES+I+ + + P+ L +A Q LGK F+ YPHL E V + +K R +
Sbjct: 649 KKESVIMSLNSDNPNMTAPANLPSLASQWLGKICFVGYPHLKEALVTGLYSKAQRCTLIS 708
Query: 813 NSGPVFERAAKDMQDA--FQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPR 870
SG F ++A + L K+++ + + + G++IG+T+VL+ +E R+ F P
Sbjct: 709 PSGKAFNTFTNSPEEAKTWALHKRNLAEERFNRWGIEIGDTQVLLSALLIEGRRDVFDPE 768
Query: 871 GKVTQQRTFIRSTVT-YAYQSAVLNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGG 929
Q + S+ T YA Q+ + ++ + + + + I+ G + L P+YGS G
Sbjct: 769 TSRAQSVPQLASSETVYALQTVMYDVPKRDSADGSRLLSRIYPAGTEFVHLGAPNYGSVG 828
Query: 930 CVISTVKEENSF-----IKLSFKVQQEP--DLSDLVHLQDDTVYNYLPSYTV--ASKLSI 980
V+S + + F + EP DL+ LV + + P ++V A+++
Sbjct: 829 HVVSCDDAKGLVSVELDVTSDFSPKSEPDLDLAALVASGAASERDGEPWFSVARAARMVN 888
Query: 981 SPL-LLSRFTGSIFIIDSTEEGAK---RHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYT 1036
+P+ S+ T + I + + R N+GL +K +N+E+ G+ RR E W Y+
Sbjct: 889 APVAFFSKITSTFTIFGGSSASPQQNTRINLGLFVKNQSQNKELPGWARRIE--NNWEYS 946
Query: 1037 EQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFP-HQGEQRVAQIVSWLKEQPHAKA 1095
V ++ Y+ FP+ FG+ H + +D+FP G+ +VA + ++LK P +
Sbjct: 947 ASTVRTVQGYLDAFPDFFGYAIAHDKSNFLYLNDIFPAGDGQAQVAAMRTYLKTLPCQGS 1006
Query: 1096 EVRPCGAAVVDAKVVSLIEH-AVDTCEKVEKQITL------------------------- 1129
+ CG+ ++ AKVV+ +E A K Q
Sbjct: 1007 TLVTCGSLILPAKVVASVEQLAKQFVNKSRAQFAAATGAGPQDDYDPAAAVVTATPAVIQ 1066
Query: 1130 -----FVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGE 1184
KP LY+P T L PD T F+L DRVVN+ +P G +GT++ I +
Sbjct: 1067 HVAQNAAKPAYLYLPCST--TLMPDTSTTFELLDRVVNVSTSGKIPFGLKGTVVAIY--D 1122
Query: 1185 TSYDAMYDVVFDKPFPHGVKIRCSESR--GYRMPAQAMINLSYGERLCGNSN 1234
T+ D++ DVVFD+PF G ++ R G + +I+L++G R+ G S+
Sbjct: 1123 TTPDSL-DVVFDEPFLGGSRLEGKLLRECGATVKPFTLISLTHGLRVHGTSH 1173
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 79/108 (73%), Gaps = 2/108 (1%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MNGIIHNCSHPND DP FRITE +IF +IF YI+ LF +I+P++ FFMA+DGVAPRAKMN
Sbjct: 1 MNGIIHNCSHPNDVDPSFRITEDKIFAEIFAYIDHLFNIIRPQRTFFMAVDGVAPRAKMN 60
Query: 96 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD--FITLKFCFPKKL 141
QQR RRFRSAKE E +A+ G+ +P + FD IT F KL
Sbjct: 61 QQRARRFRSAKENESKLAEARRSGKPIPETEPFDSNCITPGTAFMSKL 108
>gi|193784826|dbj|BAG53979.1| unnamed protein product [Homo sapiens]
Length = 805
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/825 (44%), Positives = 506/825 (61%), Gaps = 58/825 (7%)
Query: 201 MCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKS 260
M RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHKIM++IR K+
Sbjct: 1 MARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHKIMEFIRSEKA 51
Query: 261 KPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFF 320
KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + ++ PEET F
Sbjct: 52 KPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---RVCAPEETTFH 108
Query: 321 LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIING 380
LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP+LP LHI +
Sbjct: 109 LLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHD 166
Query: 381 ALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKM 440
ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E + D+++ E K+
Sbjct: 167 ALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFESKV 226
Query: 441 GKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYS 490
G K+ + +KEK K + + A D + +G E + + N E+
Sbjct: 227 GNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKN--EG-EMITSKDNLED---E 280
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW LHYYY+G S
Sbjct: 281 TEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYYYHGVQS 337
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
WSWYYP+HYAP++SDI + S L + +E+G+PF PF+QLLAVLPAASK LLP YQ+LMT
Sbjct: 338 WSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTN 397
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L EER RN+H
Sbjct: 398 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHS 457
Query: 671 PMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL 728
L+ Y + + P+ FPAI K + D V NK + + + L
Sbjct: 458 ECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK--ITRIDQKAL 515
Query: 729 YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQVADQILGKT 785
Y FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++ VA +LGK+
Sbjct: 516 YFCGFPTLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVENVASSVLGKS 575
Query: 786 IFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAAKDMQDAFQLS 832
+F+N+PHL E RV AV+ +++ ++ G V K+ Q +
Sbjct: 576 VFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGDKE-QSNWAKE 634
Query: 833 KKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAV 892
+ I++ Y + G+ I T +VY Q + RKY G+V ++ + + V + YQ+ V
Sbjct: 635 VQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQVVPFVYQTIV 694
Query: 893 LNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEENSFIKLSFKVQ 949
+++ KT+D++F F L P+YG G V + V E I++ F +
Sbjct: 695 KDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEGR-IRVIFSIP 753
Query: 950 QEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFI 994
EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI
Sbjct: 754 CEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFI 798
>gi|19114394|ref|NP_593482.1| exonuclease II Exo2 [Schizosaccharomyces pombe 972h-]
gi|729456|sp|P40383.1|XRN1_SCHPO RecName: Full=5'-3' exoribonuclease 1; AltName: Full=Exonuclease 2;
AltName: Full=Exonuclease II; Short=Exo II; AltName:
Full=p140
gi|531022|gb|AAB42181.1| deoxyribonuclease [Schizosaccharomyces pombe]
gi|2370486|emb|CAB11514.1| exonuclease II Exo2 [Schizosaccharomyces pombe]
Length = 1328
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/1214 (34%), Positives = 634/1214 (52%), Gaps = 148/1214 (12%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKKL +MA+DG APRAKMNQQR RRFR+AK+A KA+ GE P E++FDSNCITPG
Sbjct: 77 PKKLLYMAVDGCAPRAKMNQQRSRRFRTAKDAHDARLKAERNGEDFP-EEQFDSNCITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM R+ +QL YF+ K+T D W+++ VI SGH+ PGEGEHKIM+YIR
Sbjct: 136 TTFMERVSRQLYYFIHKKVTNDS---------QWQNIEVIFSGHDCPGEGEHKIMEYIRT 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K++P YNPN RHCLYGLDADLIMLGL +H+P+F LLREEV F S ++
Sbjct: 187 QKAQPSYNPNTRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGPASRNRSKELA---HQ 243
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
KF+LLHLSL+R+YLE EF + + +F + +E I+DD++L+ F +GNDF+P+LP LHI
Sbjct: 244 KFYLLHLSLLREYLEFEFQECR--STFTFKYDLEKILDDFILLAFFVGNDFLPHLPGLHI 301
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKR----------FEKFLTKLA-------- 419
GAL L++ +Y++V+P+ GYINE G +N+ R FEK + K
Sbjct: 302 NEGALALMFSIYKKVMPSAGGYINEKGVINMARLELILLELENFEKEIFKAEVSETKNNG 361
Query: 420 -----SFDFEQF-REKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDY-- 471
SFDF ++ E DI+ + G+ F + S+E D +A I + D +
Sbjct: 362 NSDKPSFDFLKYITESTNDIKAMTGEQKNYFLQIKKFLSSREPFIDFSANISSVDQRFLR 421
Query: 472 ---------------DDGTEEV------LNY-----------------ANYEEYYYSDED 493
DGT + L + Y+ +E+
Sbjct: 422 RLCNDLHLSFSKIIKVDGTHLLRITFRDLEFNDEDEDEIEQDEIERVLQKYDNIPLLNEE 481
Query: 494 EEWR-TNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWS 552
+ + N +F Q K DYY K+ ++ E L+ AE Y+ +QW L YYY GC SW
Sbjct: 482 QALKEKNVEKDFIQWKDDYYRSKVGFSYYDEEALKAMAERYVEGLQWVLFYYYRGCQSWG 541
Query: 553 WYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLEN 612
WYY +H+AP ISD+ + + ++MG PF PF+QL+AVLPA S+ L+P +++LM
Sbjct: 542 WYYNYHFAPKISDVLKGLDVKIDFKMGTPFRPFEQLMAVLPARSQALVPPCFRDLMVNSE 601
Query: 613 SPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPM 672
SPI+++YPE FA D NGK WEAVV+IPFIDE +LI A+ + + LT+EER RN
Sbjct: 602 SPIIDFYPENFALDQNGKTASWEAVVIIPFIDETRLIDALASKDKFLTEEERKRNSFNAP 661
Query: 673 LVYTYSN--VNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK----GLCQDVNL 726
V++ + + + P FP + ++KP Y P+ K GLC V L
Sbjct: 662 TVFSLAEDYTSFYPSSLPSLFPDL-VTRCIQKP------YSLPSMEGKEYLVGLCPGVFL 714
Query: 727 KLY-VTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGK 784
+ + FP+ ++ ++ + VF SRN S+I+ V+D + +Q+A Q +GK
Sbjct: 715 GAFGMVGFPSFHTLKHKAELVYHGINVFGNESRNPSVIVNVEDVKSALTSEQIAMQYVGK 774
Query: 785 TIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSI--TDGYYT 842
IF+++P+L E V++ A +S + NS + +R +++ + Q +K Y
Sbjct: 775 RIFVDWPYLREAYVES-AMDESYMYLASNS-TIEKRDLAEIEKS-QWGRKCSHKIREYSK 831
Query: 843 KLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESL 902
+ GV G+ +L+ +P++ +Y T++ ++ + +VL A+ +
Sbjct: 832 RFGVLFGDISLLLQVRPIKGLEY--------TREGALVK-----IFNESVLEDYPAQLVV 878
Query: 903 EYKTID------------EIFY-PGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ 949
E ID E+ Y PG + F L +YG I+ K+ I LS
Sbjct: 879 EKIAIDDPRFTEREAPPVEVEYPPGTKAFHLGEYNYGRPA-QITGCKDNKLIIWLSTAPG 937
Query: 950 QEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGL 1009
+ ++ + Y PSY VA L+I PLLLS+ T S I G KR NIGL
Sbjct: 938 LDAQWGRVLVNDSKSKEKYYPSYIVAKLLNIHPLLLSKITSSFLI----SNGTKRENIGL 993
Query: 1010 NIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRD 1069
N+KF +N++V+GF+R+ +TK W ++ + V L+K Y+ FP++F L H++ D
Sbjct: 994 NLKFDARNQKVLGFSRK--STKGWEFSNKTVALVKEYINTFPQLFNILTTHATKDNLTVK 1051
Query: 1070 DVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEH---AVDTCEKVEKQ 1126
D FP Q++A + W+KE+ +D+ ++ LIE +D+ +V K+
Sbjct: 1052 DCFPKDDTQQLAAVKHWIKEKGINSLTRVSLDEDALDSDIIKLIEEKASTIDSTYQVPKK 1111
Query: 1127 ITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETS 1186
+ V L P T L +F L DRVV ++D VP+ GT++GI+
Sbjct: 1112 V-FGVPRYALLKPSQTRGIL---HSQEFALGDRVVYVQDSGKVPIAAYGTVVGIMLHHL- 1166
Query: 1187 YDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPHVKNINVMQ 1244
DVVFD PF G + RCS G ++ ++N++ + + + NV
Sbjct: 1167 -----DVVFDLPFMSGTTLDGRCSPYHGMQVEVSMVLNVTNPQFVVNTRAGKNRKTNVSA 1221
Query: 1245 SRGERNTNYAQVTR 1258
+ + T+ VT+
Sbjct: 1222 NNVSQGTDSRLVTK 1235
Score = 162 bits (410), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 99/129 (76%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFR++SERYP S+++ +IPEFDNLYLDMNGI+HNC+H ND+ + E+++
Sbjct: 1 MGIPKFFRWMSERYPLCSQLIENDRIPEFDNLYLDMNGILHNCTHKNDDHSSPPLPEEEM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ IF+YIE LF I+PKKL +MA+DG APRAKMNQQR RRFR+AK+A KA+ GE
Sbjct: 61 YIAIFNYIEHLFEKIKPKKLLYMAVDGCAPRAKMNQQRSRRFRTAKDAHDARLKAERNGE 120
Query: 121 RLPTEKRFD 129
P E++FD
Sbjct: 121 DFP-EEQFD 128
>gi|268533038|ref|XP_002631647.1| C. briggsae CBR-XRN-1 protein [Caenorhabditis briggsae]
Length = 1183
Score = 639 bits (1649), Expect = e-180, Method: Compositional matrix adjust.
Identities = 397/1127 (35%), Positives = 609/1127 (54%), Gaps = 126/1127 (11%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+FFMA+DGVAPRAKMNQQR RRF SA+ A+ +A KGE LP+EKRFDSNCITPG
Sbjct: 77 PQKVFFMAVDGVAPRAKMNQQRARRFMSARTAQTQMDQAIAKGEVLPSEKRFDSNCITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RLH++L +V+ K +D W+ +ILSGH PGEGEHKIMD+IR
Sbjct: 137 TYFMTRLHEKLDAWVREKSVSDTRWQGRK---------IILSGHNVPGEGEHKIMDFIRS 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
++ Y+PN RHC+YGLDADLIMLG+ +HEP+FSLLREEV FNT+ K Q P+ T
Sbjct: 188 ERAGTGYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLREEVTFNTRPRKN-DQKKKPKRT 246
Query: 318 K-----FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
F LLHLSL+R+YL EF +KE L F + +E I+DDW++MG L+GNDF+P+L
Sbjct: 247 DSEVKTFHLLHLSLLREYLAWEFADVKES--LPFEYDMERIVDDWIMMGLLVGNDFLPHL 304
Query: 373 PDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
P +HI + ALPLLY Y++VLP+LD YINE GYLNL RFEKFL +L+ D F +K D
Sbjct: 305 PSIHIHDDALPLLYSTYKKVLPSLD-YINESGYLNLARFEKFLAQLSLNDKNCFMDKLED 363
Query: 433 IQYLEGK--------------MGKKFSDVFHKE-------KSKEMDPDLAALIKATDDDY 471
Q++E K + + SD+ +E S+ D AA + ++D
Sbjct: 364 DQFMESKKLPRNGSGEEEEELVAFESSDIEDEEADGEKEDSSRNNDDHDAAFVSDHEEDK 423
Query: 472 DDGT-----EEVLNY-ANYEEYYYSDE------------------DEEWRTNFFSEFGQH 507
++GT EE +Y A + E ++DE + W ++F +H
Sbjct: 424 NNGTGKTSAEESPDYDAQFLEEEFNDELATLALSGMDDADFANNVEACWTKAIDNQFKRH 483
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY KL Y ++ LR QAE Y+RAIQWNLHYYY+GCVSWSW+YPHHYAP+ISD++
Sbjct: 484 KKYYYSDKLRYKNISKAELRAQAEGYVRAIQWNLHYYYHGCVSWSWFYPHHYAPFISDVQ 543
Query: 568 DFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLE--NSPILEYYPEEFAT 625
F+ + +++E+ +PF PF+QLLAVLP AS++ LP P Q LM+ + S I ++YP +F T
Sbjct: 544 GFADMKIEFELSKPFQPFEQLLAVLPEASRDCLPRPLQELMSSDPAQSAIHDFYPSKFET 603
Query: 626 DLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTA 685
DLNGKK DWEAVVLIPFI+E +L++A+++ ++ L+ EE+ RN HG + S G
Sbjct: 604 DLNGKKNDWEAVVLIPFIEEKRLLEAIESKQNRLSQEEKMRNTHGCH-IQVISTRQGGGE 662
Query: 686 LAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKI 745
D + + ++R + +++ GL +V + +Y FPT+KH+ + K+
Sbjct: 663 WKMD-------RQELSQEIFR----IPKEQVKWGLLPNVKMDVYFPGFPTMKHLSHSGKL 711
Query: 746 ENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATK 804
A +F SR ES+++ V+++ + + ++ + + I++P L +V ++
Sbjct: 712 SFANCNIFGMASRKESMVLKVENEKSDKDIIEWGSELCDEEVCIDWPILKLAKVDSIWGG 771
Query: 805 DSRI--SFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTE---------V 853
D +I + + + + ++ + +Q +T+ T+ ++I +
Sbjct: 772 DDKIVRKVEGDDDIIVKDMTEEEKKQWQSHVNQLTERMMTRYAIEIAGQKDGKGKHIRPA 831
Query: 854 LVYGQPVESRKYFF-------GPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKT 906
L + + Y GP K +Q + S V ++
Sbjct: 832 LAWVRKFTGLVYETNEGSDSEGPTLKAVKQWSGPTSLYPVLLPLVVKDVLLENSRFLADL 891
Query: 907 IDEIFYPGCQCFALSNPH---YGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLV-HLQD 962
+ YP + +P +G G V ++ S L + + D++ +L+
Sbjct: 892 PVSLAYPLQSVVWILDPKASLFGMPGMVNGYRDQDKSQCCLEVIGMTDDNRVDIMENLRK 951
Query: 963 DT---VYNYLPSYTVASKLSISPLLLSRFTGSIFII----DSTEEGAK-----RHNIGLN 1010
D+ ++ Y A + I L +R TG++ + +S E G + + N GL+
Sbjct: 952 DSDRFTLRWMGGYDCARQCQIDVRLFARITGTMMLWNEPRESVETGQQISSDSKINCGLS 1011
Query: 1011 IKFSRKNEEVVGFTRRDE-------TTKKWFYTEQVVTLIKNYMKQFPEVFGFLKD---H 1060
+K+SR++ + FT R E T+K WFYT L+ Y K+FPE+ + +
Sbjct: 1012 LKYSRRDICLADFTDRIETVNARGVTSKVWFYTPLTCALVTEYKKRFPELIKYFESVGMS 1071
Query: 1061 SSDDIYLRDDVFPH--QGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD 1118
+DD+Y +D++ + Q + + A++ +L P AE CG D +++S IE +
Sbjct: 1072 QTDDVYYTEDIWKNEKQRDAKFAELKEFLSNLPSHDAEQLKCGTEYADRQIISEIERRIH 1131
Query: 1119 TC--EKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNI 1163
+K FV P+ ++ + K+ DP+ F + DRV ++
Sbjct: 1132 QLPPKKKRAMTRYFVPPSMVFRFELYDGKVQMDPEADFLILDRVASM 1178
Score = 206 bits (523), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 114/144 (79%), Gaps = 4/144 (2%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ SERYPCLSEV+ E QIPEFDNLYLDMNGIIHNCSHPND+D FRITE++I
Sbjct: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEEEI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F +IF YIE L+ +I+P+K+FFMA+DGVAPRAKMNQQR RRF SA+ A+ +A KGE
Sbjct: 61 FVNIFAYIENLYNLIKPQKVFFMAVDGVAPRAKMNQQRARRFMSARTAQTQMDQAIAKGE 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFM 144
LP+EKRFD C +FM
Sbjct: 121 VLPSEKRFD----SNCITPGTYFM 140
>gi|46124843|ref|XP_386975.1| hypothetical protein FG06799.1 [Gibberella zeae PH-1]
Length = 1370
Score = 635 bits (1638), Expect = e-179, Method: Compositional matrix adjust.
Identities = 440/1332 (33%), Positives = 665/1332 (49%), Gaps = 172/1332 (12%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPN-DNDPHFRITEKQ 59
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + D FR++E++
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDAGEDVSFRLSEEE 60
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+F IF+YIE LF I+PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE KA +G
Sbjct: 61 MFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRSRRFRTALDAEKARDKAISEG 120
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 179
+P E+ FD C FM AK++QQ
Sbjct: 121 VEIPKEEPFD----SNCITPGTEFM--------AKLSQQ--------------------- 147
Query: 180 GERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VIL 238
LRYFV K++ D W+ C ++L
Sbjct: 148 ----------------------------LRYFVNKKVSEDTDWQG----------CEIVL 169
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P+YN N+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 170 SGHEVPGEGEHKIMEYIRNAKAQPNYNHNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 229
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F S ++ E F+LLHL ++R+YLE+EF +L E G LSFPF +E +IDD++
Sbjct: 230 TFGRASKSKSKEL---EHQNFYLLHLCIVREYLEMEFQELGEEGALSFPFDLERVIDDFI 286
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP LHI GAL ++++Y+ +LP DGYINE G +N+ R ++ L +L
Sbjct: 287 LMAFFVGNDFLPNLPSLHINEGALANMFRIYKSILPKCDGYINENGVINMGRLQRLLGEL 346
Query: 419 ASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEK-------------------------- 452
++ + + F +D ++ K +K + H E
Sbjct: 347 SNTEIDAFESDVSDEKWYASKQMEKRLENKHAETKAPKGGQLVLTSAQRDLWKQKIRPYI 406
Query: 453 SKEMDP--DLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEF------ 504
SK D DL +KA D + + ++ + + ED+E + F
Sbjct: 407 SKRSDEPLDLGTSLKAADRKFVQDLADSMHLQ-----WSTKEDDEGHRHLIVSFPPKNND 461
Query: 505 ------GQHKTDYYHYKL----DYAKVTNEVLRDQAECYIRAIQ-----WNLHYYYNGCV 549
+ + + Y++ D A V + D + Y + Q W YY
Sbjct: 462 DDDEDDEEEEGNLAAYRVMKTYDKALVIDLTAEDAQKQYDQLYQDKYQGWKTKYYLQKFE 521
Query: 550 SWSWYYPHHYAPYISDIKDFSHL--NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNL 607
W+ P Y ++ + + +L ++ G+PFLP++QL+ VLP SK+++P+ Y +L
Sbjct: 522 EWA---PDSYDKELTALYVVKGVGADLNFKKGQPFLPYEQLMGVLPDRSKKIVPKVYHDL 578
Query: 608 MTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
MT +SPI+++YP +F D+NGKK DWEAV+ IPFIDE +L+ AM LL +E++RN
Sbjct: 579 MTNPDSPIVDFYPRDFELDMNGKKMDWEAVIKIPFIDEKRLLDAMRPKNELLEPDEKARN 638
Query: 668 RHGPMLVYTYS-NVN-LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVN 725
G L +TYS V+ + + P FP I +E D V + GL
Sbjct: 639 GFGVPLKFTYSPEVDFVYPSPLPGVFPEIQNCRCIENIFDLPD--VEGLEYLSGLTSGAL 696
Query: 726 LKL-YVTHFPTLKHVQFTHK-IENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILG 783
LK+ + FPTL + +T + +E V VFQ SRN S+ + + + + LG
Sbjct: 697 LKVDALAGFPTLHTLPYTAQLVEGYGVNVFQADSRNPSVCVTLTGTENRTKIETWKAKLG 756
Query: 784 KTIFINYPHLIEIRVQAVATKDSRISFD-KNSGPVFERAAKDMQDAFQLSKKSITDGYYT 842
+ ++ YP L E +V + +D S++ ++G V R + + A + + ++
Sbjct: 757 QRCYVGYPFLQEAKV--IKVQDELFSYELADNGDVMARDHNNREAADWAKEADYIENWHA 814
Query: 843 K-LGVDIGNTEVLVYGQPVESR-KYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARE 900
K L + IG E LVY ++ + G K + +RS TYA Q+ V + E
Sbjct: 815 KRLAITIGQVECLVYVHMLKGLIRTEEGALTKEYAENPSLRS--TYAAQTIVDEVVNEDE 872
Query: 901 SL---EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDL 957
E I+E F G + F L + YG V + + + K +++ +
Sbjct: 873 RFIEKEALPIEEEFPRGTRAFFLGDYSYGRPLEVAAHTGNKAEVVVSVLKNKEQDFAKQI 932
Query: 958 VHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKN 1017
+H Q + Y PS+ VA +L I PL+LS+ T S II+S N+KF +
Sbjct: 933 IH-QAERSNPYTPSFAVAKQLGIHPLVLSKITSSYQIINSAGLRLNLGL---NLKFEGRK 988
Query: 1018 EEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVF--PHQ 1075
+V+G++R+ T W ++ + LI +YM FP+ F ++ L D++ P
Sbjct: 989 LKVLGYSRKSHTG--WEFSGMAIKLIADYMVAFPDFFAAIQREPQKSDVLETDLWKDPAV 1046
Query: 1076 GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNK 1135
QRV +IV+WLK+Q +K E P A +D+++V + H + ++I + K
Sbjct: 1047 ASQRVKEIVAWLKKQETSKFERVPLEAEQLDSEIVKALAHVGEQVHAASQEIEI----KK 1102
Query: 1136 LY-IPKPTL----DKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAM 1190
L +P+ L D F L DRV + VP+ RGT++GI + T+ +
Sbjct: 1103 LRSVPRSALLKPSDAEMVLGSQNFTLGDRVTYVSAAGKVPIATRGTVVGISRTATAL--L 1160
Query: 1191 YDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPHVKNINVMQSRGE 1248
DVV+D F G + R RG + + +++N S + + +S + + G
Sbjct: 1161 LDVVWDTSFMSGTTLNERAPVFRGQTVASSSVLNTSNKQVVSTSSKSQQRKPVIAAHGGY 1220
Query: 1249 RNTNYAQVTRQP 1260
N Q P
Sbjct: 1221 ANVGVTQYRDAP 1232
>gi|393910356|gb|EFO19268.2| hypothetical protein LOAG_09226 [Loa loa]
Length = 1318
Score = 633 bits (1633), Expect = e-178, Method: Compositional matrix adjust.
Identities = 383/1052 (36%), Positives = 574/1052 (54%), Gaps = 88/1052 (8%)
Query: 252 MDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQI 311
MD+IR +S+ DY+ N RHCLYGLDADLIMLG+C+HEP+F+LLREEVKF + N G
Sbjct: 1 MDFIRSERSRSDYDANTRHCLYGLDADLIMLGICSHEPHFALLREEVKFGRQRNHNGKHK 60
Query: 312 VTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPN 371
E F LLHLSL+R+YL EF LKE L F + +E++IDDWVLMGFL+GNDFIP+
Sbjct: 61 TGVNEITFHLLHLSLLREYLSWEFHSLKEK--LPFEYDLESVIDDWVLMGFLVGNDFIPH 118
Query: 372 LPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYA 431
LP +HI ALPLLY Y EVLP LDGYINE G LNLKRFE FL A D + F E+
Sbjct: 119 LPHVHIHEDALPLLYATYNEVLPQLDGYINEAGVLNLKRFEIFLKNFAKNDRKNFIEQMD 178
Query: 432 DIQYLEGKMGKKFSDVFHK--------------------EKSKEMDPDLAALIKATDDDY 471
D YL K + S+ + K EK++ + D +D +
Sbjct: 179 DEAYLSSK---RISNAWKKGPNDQQNCDEDLEPFDLSDAEKTEITEKDSRKGAFDSDSNA 235
Query: 472 DDGTEEV-----------LNYANY----------------EEYYYSDEDEE-WRTNFFSE 503
D EE+ + + + +E Y +D D+ W
Sbjct: 236 SDECEEIAGPRILTAAKRMTHGYFGLDKDSDNDLPIALLDDESYENDYDQSSWTPVVSRA 295
Query: 504 FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYI 563
F HK DYY+ K+ Y+ ++ E LR+QAE YIRAIQWNLHYYY+GC SWSW+YPHHYAPYI
Sbjct: 296 FKNHKRDYYNDKMKYSNISKEELREQAEGYIRAIQWNLHYYYHGCCSWSWFYPHHYAPYI 355
Query: 564 SDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEF 623
SD+ DF+ + + +++ EPF PF+QLLAVLPAAS + LP PY+ LM+ SPI+++YPE+F
Sbjct: 356 SDVSDFAEMEMNFDLSEPFKPFEQLLAVLPAASADCLPLPYRELMSDPKSPIIDFYPEQF 415
Query: 624 ATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY--SNVN 681
TDLNGKK DWEAVVLIPFI E +L++AM + LLTDEER RN HGP L+++Y S+ +
Sbjct: 416 DTDLNGKKNDWEAVVLIPFIREDRLLQAMAIKDPLLTDEERKRNLHGPHLLFSYDPSSSH 475
Query: 682 LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQF 741
+ + PD FP I E + + + N++ GL V L + FPTLKH+
Sbjct: 476 ILKSTFPDTFPDIQECTVKIDEVGMNQFRISRNQIVHGLLPGVKLGVIFPGFPTLKHIPH 535
Query: 742 THKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQ----VADQILGKTIFINYPHLIEIR 797
++ A ++VFQQPS+ +S+I+ K P L++ +A ++G + +N+P L +
Sbjct: 536 IAELHFADIRVFQQPSKKQSMILRITK--RPELEKDMMAIAFDLVGTEVHVNWPVLQKAW 593
Query: 798 VQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYG 857
VQ + T + + + + +++ Q+ + + + G+D G + L
Sbjct: 594 VQEIWTDHEKYIKTSDEKIICDSLSEEEQNVYSGYVSITRRNEFERRGIDAGEQKGLALV 653
Query: 858 QPVE-SRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKTIDEIFYP-GC 915
Q + SRK F KV +R+++ S L +Q A E + E YP
Sbjct: 654 QVAQGSRKCF--EEQKVVIKRSYVDINNAIPV-SLSLVVQNALEDWDSACSFEDLYPMNA 710
Query: 916 QCF--ALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLS--DLVHLQDDTVYNYLPS 971
Q F ++ + +YG G + + +S K+ D+S D++ D+ +
Sbjct: 711 QIFISSVESKYYGFCGFIKENHLATKGTLTVSCKIPLTVDMSFCDILANYDNYALKWYSI 770
Query: 972 YTVASKLSISPLLLSRFTGSIFI-------IDSTEEGAKRHNIGLNIKFSRKNEEVVGFT 1024
Y VA L + ++ R TG +++ I S + NIGL +KF+++N+ V FT
Sbjct: 771 YEVARSLRTTVDVIGRITGCVYVSLNESDSISSRNVPLNKINIGLGLKFTKRNQIVPDFT 830
Query: 1025 RRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIV 1084
RR + Y+ + +I+NY ++P VF L++ ++ +++ +FP + + +
Sbjct: 831 RR-SSEGHCLYSSRAFDMIRNYKMKYPRVFTHLEELNNFQGHIK-QIFPGLDGKELNAKL 888
Query: 1085 SWLKEQPHA---KAEVRPCGAAVVDAKVVSLIEH--AVDTCEKVEKQIT--LFVKPNKLY 1137
LK H K + + VD+ V+ +E + + KQ L VKP ++
Sbjct: 889 EELKNFLHTVVPKDSLESADSTFVDSGVLKEVEKRTQIVISKSTLKQTCKRLAVKPRAIF 948
Query: 1138 IPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDK 1197
+ + + PDP T+F+L DRV+ ++ + P G GT+IG++ T DV+FDK
Sbjct: 949 MTELCKGDIMPDPGTEFRLLDRVICVKKLHIAPFGEFGTVIGLLN--TGSGQKIDVLFDK 1006
Query: 1198 PFPHGVKIRCSESRGYRMPAQAMINLSYGERL 1229
P+ G +R ++ G R+P ++IN+++G+R+
Sbjct: 1007 PYFGGKIMRSGKASGARLPISSVINITHGKRM 1038
>gi|408388369|gb|EKJ68055.1| hypothetical protein FPSE_11866 [Fusarium pseudograminearum CS3096]
Length = 1391
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 444/1348 (32%), Positives = 666/1348 (49%), Gaps = 186/1348 (13%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPN-DNDPHFRITEKQ 59
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + D FR++E++
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDAGEDVSFRLSEEE 60
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+F IF+YIE LF I+PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE KA +G
Sbjct: 61 MFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRSRRFRTALDAEKARDKAISEG 120
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 179
+P E+ FD C FM AK++QQ
Sbjct: 121 VEIPKEEPFD----SNCITPGTEFM--------AKLSQQ--------------------- 147
Query: 180 GERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VIL 238
LRYFV K++ D W+ C ++L
Sbjct: 148 ----------------------------LRYFVNKKVSEDTDWQG----------CEIVL 169
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P+YN N+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 170 SGHEVPGEGEHKIMEYIRNAKAQPNYNHNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 229
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F S ++ E F+LLHL ++R+YLE+EF +L E G LSFPF +E +IDD++
Sbjct: 230 TFGRASKSKSKEL---EHQNFYLLHLCIVREYLEMEFQELGEEGTLSFPFDLERVIDDFI 286
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP LHI GAL ++++Y+ +LP DGYINE G +N+ R ++ L +L
Sbjct: 287 LMAFFVGNDFLPNLPSLHINEGALANMFRIYKSILPKCDGYINENGVINMGRLQRLLGEL 346
Query: 419 ASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAA---------------L 463
++ + + F +D ++ K +K + H E L +
Sbjct: 347 SNTEIDAFENDVSDEKWYASKQMEKRLENKHAETKPPKGGQLVLTSAQRDLWKQKIRPYI 406
Query: 464 IKATDDDYDDGT-------EEVLNYANYEEYYYS-DEDEEWRTNFFSEF----------- 504
K +DD D GT + V + A+ +S ED+E + F
Sbjct: 407 SKRSDDPLDLGTSLKADDRKFVQDLADSMHLQWSTKEDDEGHRHLIVSFPPKNNDDDDDE 466
Query: 505 --GQHKTDYYHYKL----DYAKVTNEVLRDQAECYIRAIQ-----WNLHYY--------- 544
+ + + Y++ D A V + D + Y + Q W YY
Sbjct: 467 DDEEEEGNLAAYRVMKTYDKALVIDLTAEDAQKQYDQLYQDKYQGWKTKYYLQKFEEWAP 526
Query: 545 -------------YNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAV 591
Y + W YY Y D+ +L ++ G+PFLP++QL+ V
Sbjct: 527 DSYDKELTALCENYVQGLQWVLYY------YYRDVVKGVGADLNFKKGQPFLPYEQLMGV 580
Query: 592 LPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKA 651
LP SK+++P+ Y +LMT +SPI+++YP +F D+NGKK DWEAV+ IPFIDE +L+ A
Sbjct: 581 LPDRSKKIVPKVYHDLMTNPDSPIVDFYPRDFELDMNGKKMDWEAVIKIPFIDEKRLLDA 640
Query: 652 MDAVEHLLTDEERSRNRHGPMLVYTYS-NVN-LGTALAPDYFPAINENHAVEKPLYRDDI 709
M LL +E++RN G L +TYS V+ + + P FP I +E D
Sbjct: 641 MRPKNELLEPDEKARNGFGVPLKFTYSPEVDFVYPSPLPGVFPEIQNCRCIENIFDLPD- 699
Query: 710 YVHPNKLRKGLCQDVNLKL-YVTHFPTLKHVQFTHK-IENAKVKVFQQPSRNESIIIVQD 767
V + GL LK+ + FPTL + +T + +E V VFQ SRN S+ +
Sbjct: 700 -VEGLEYLSGLTSGALLKVDALAGFPTLHTLPYTAQLVEGYGVNVFQADSRNPSVCVTLT 758
Query: 768 KVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFD-KNSGPVFERAAKDMQ 826
+ + + LG+ ++ YP L E +V + +D S++ ++G + R + +
Sbjct: 759 GTENRTKIETWKAKLGQRCYVGYPFLQEAKV--IKVQDELFSYELADNGDIMTRDHNNRE 816
Query: 827 DAFQLSKKSITDGYYTK-LGVDIGNTEVLVYGQPVESR-KYFFGPRGKVTQQRTFIRSTV 884
A + + ++ K L + IG E LVY ++ + G K + +RS
Sbjct: 817 AADWAKEADYIENWHAKRLAITIGQVECLVYVHMLKGLIRTEEGALTKEYAENPSLRS-- 874
Query: 885 TYAYQSAVLNLQQARESL---EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSF 941
TYA Q+ V + E E I+E F G + F L + YG V + +
Sbjct: 875 TYAAQTIVDEVVNEDERFIEKEALPIEEEFPRGTRAFFLGDYSYGRPLEVAAHAGNKAEV 934
Query: 942 IKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEG 1001
+ K +++ ++H Q + Y PS+ VA +L I PL+LS+ T S II+S
Sbjct: 935 VVSVLKNKEQDFAKQIIH-QAERSNPYTPSFAVAKQLGIHPLVLSKITSSYQIINSAGLR 993
Query: 1002 AKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHS 1061
N+KF + +V+G++R+ T W ++ + LI +YM FP+ F ++
Sbjct: 994 LNLGL---NLKFEGRKLKVLGYSRKSHTG--WEFSGMAIKLIADYMVAFPDFFAAIQREP 1048
Query: 1062 SDDIYLRDDVF--PHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDT 1119
L D++ P QRV +IV+WLK+Q +K E P A +D+++V + H +
Sbjct: 1049 QKSEVLETDLWKDPAVASQRVKEIVAWLKKQETSKFERVPLEAEQLDSEIVKALAHVGEQ 1108
Query: 1120 CEKVEKQITLFVKPNKLY-IPKPTL----DKLCPDPDTKFKLFDRVVNIRDCYTVPLGYR 1174
++I + KL +P+ L D F L DRV + VP+ R
Sbjct: 1109 VHAASQEIEI----KKLRSVPRSALLKPSDAEMVLGSQNFTLGDRVTYVSAAGKVPIATR 1164
Query: 1175 GTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGN 1232
GT++GI + T+ + DVV+D F G + R RG + + +++N S + + +
Sbjct: 1165 GTVVGISRTATAL--LLDVVWDTSFMSGTTLNERAPVFRGQTVASSSVLNTSNKQVVSTS 1222
Query: 1233 SNPHVKNINVMQSRGERNTNYAQVTRQP 1260
S + + G N Q P
Sbjct: 1223 SKSQQRKPVIAAHGGYANVGVTQYRDAP 1250
>gi|312085747|ref|XP_003144802.1| hypothetical protein LOAG_09226 [Loa loa]
Length = 1443
Score = 630 bits (1626), Expect = e-177, Method: Compositional matrix adjust.
Identities = 383/1057 (36%), Positives = 574/1057 (54%), Gaps = 93/1057 (8%)
Query: 252 MDYIRYMKSKPDYNPNMRHCLYGLDADL-----IMLGLCTHEPYFSLLREEVKFNTKSNK 306
MD+IR +S+ DY+ N RHCLYGLDADL IMLG+C+HEP+F+LLREEVKF + N
Sbjct: 1 MDFIRSERSRSDYDANTRHCLYGLDADLASFLQIMLGICSHEPHFALLREEVKFGRQRNH 60
Query: 307 GGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGN 366
G E F LLHLSL+R+YL EF LKE L F + +E++IDDWVLMGFL+GN
Sbjct: 61 NGKHKTGVNEITFHLLHLSLLREYLSWEFHSLKEK--LPFEYDLESVIDDWVLMGFLVGN 118
Query: 367 DFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF 426
DFIP+LP +HI ALPLLY Y EVLP LDGYINE G LNLKRFE FL A D + F
Sbjct: 119 DFIPHLPHVHIHEDALPLLYATYNEVLPQLDGYINEAGVLNLKRFEIFLKNFAKNDRKNF 178
Query: 427 REKYADIQYLEGKMGKKFSDVFHK--------------------EKSKEMDPDLAALIKA 466
E+ D YL K + S+ + K EK++ + D
Sbjct: 179 IEQMDDEAYLSSK---RISNAWKKGPNDQQNCDEDLEPFDLSDAEKTEITEKDSRKGAFD 235
Query: 467 TDDDYDDGTEEV-----------LNYANY----------------EEYYYSDEDEE-WRT 498
+D + D EE+ + + + +E Y +D D+ W
Sbjct: 236 SDSNASDECEEIAGPRILTAAKRMTHGYFGLDKDSDNDLPIALLDDESYENDYDQSSWTP 295
Query: 499 NFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHH 558
F HK DYY+ K+ Y+ ++ E LR+QAE YIRAIQWNLHYYY+GC SWSW+YPHH
Sbjct: 296 VVSRAFKNHKRDYYNDKMKYSNISKEELREQAEGYIRAIQWNLHYYYHGCCSWSWFYPHH 355
Query: 559 YAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEY 618
YAPYISD+ DF+ + + +++ EPF PF+QLLAVLPAAS + LP PY+ LM+ SPI+++
Sbjct: 356 YAPYISDVSDFAEMEMNFDLSEPFKPFEQLLAVLPAASADCLPLPYRELMSDPKSPIIDF 415
Query: 619 YPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY- 677
YPE+F TDLNGKK DWEAVVLIPFI E +L++AM + LLTDEER RN HGP L+++Y
Sbjct: 416 YPEQFDTDLNGKKNDWEAVVLIPFIREDRLLQAMAIKDPLLTDEERKRNLHGPHLLFSYD 475
Query: 678 -SNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTL 736
S+ ++ + PD FP I E + + + N++ GL V L + FPTL
Sbjct: 476 PSSSHILKSTFPDTFPDIQECTVKIDEVGMNQFRISRNQIVHGLLPGVKLGVIFPGFPTL 535
Query: 737 KHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQ----VADQILGKTIFINYPH 792
KH+ ++ A ++VFQQPS+ +S+I+ K P L++ +A ++G + +N+P
Sbjct: 536 KHIPHIAELHFADIRVFQQPSKKQSMILRITK--RPELEKDMMAIAFDLVGTEVHVNWPV 593
Query: 793 LIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTE 852
L + VQ + T + + + + +++ Q+ + + + G+D G +
Sbjct: 594 LQKAWVQEIWTDHEKYIKTSDEKIICDSLSEEEQNVYSGYVSITRRNEFERRGIDAGEQK 653
Query: 853 VLVYGQPVE-SRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKTIDEIF 911
L Q + SRK F KV +R+++ S L +Q A E + E
Sbjct: 654 GLALVQVAQGSRKCF--EEQKVVIKRSYVDINNAIPV-SLSLVVQNALEDWDSACSFEDL 710
Query: 912 YP-GCQCF--ALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLS--DLVHLQDDTVY 966
YP Q F ++ + +YG G + + +S K+ D+S D++ D+
Sbjct: 711 YPMNAQIFISSVESKYYGFCGFIKENHLATKGTLTVSCKIPLTVDMSFCDILANYDNYAL 770
Query: 967 NYLPSYTVASKLSISPLLLSRFTGSIFI-------IDSTEEGAKRHNIGLNIKFSRKNEE 1019
+ Y VA L + ++ R TG +++ I S + NIGL +KF+++N+
Sbjct: 771 KWYSIYEVARSLRTTVDVIGRITGCVYVSLNESDSISSRNVPLNKINIGLGLKFTKRNQI 830
Query: 1020 VVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQR 1079
V FTRR + Y+ + +I+NY ++P VF L++ ++ +++ +FP +
Sbjct: 831 VPDFTRR-SSEGHCLYSSRAFDMIRNYKMKYPRVFTHLEELNNFQGHIK-QIFPGLDGKE 888
Query: 1080 VAQIVSWLKEQPHA---KAEVRPCGAAVVDAKVVSLIEH--AVDTCEKVEKQIT--LFVK 1132
+ + LK H K + + VD+ V+ +E + + KQ L VK
Sbjct: 889 LNAKLEELKNFLHTVVPKDSLESADSTFVDSGVLKEVEKRTQIVISKSTLKQTCKRLAVK 948
Query: 1133 PNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYD 1192
P +++ + + PDP T+F+L DRV+ ++ + P G GT+IG++ T D
Sbjct: 949 PRAIFMTELCKGDIMPDPGTEFRLLDRVICVKKLHIAPFGEFGTVIGLLN--TGSGQKID 1006
Query: 1193 VVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGERL 1229
V+FDKP+ G +R ++ G R+P ++IN+++G+R+
Sbjct: 1007 VLFDKPYFGGKIMRSGKASGARLPISSVINITHGKRM 1043
>gi|430814593|emb|CCJ28201.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1318
Score = 629 bits (1623), Expect = e-177, Method: Compositional matrix adjust.
Identities = 411/1178 (34%), Positives = 617/1178 (52%), Gaps = 152/1178 (12%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKKLFF+++DGVAPRAKMNQQR RRF++AKEA L Q+ KGE +P + FDSNCITPG
Sbjct: 75 PKKLFFLSVDGVAPRAKMNQQRSRRFKAAKEAYELYQEKISKGEDVPKDP-FDSNCITPG 133
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL +QL+YF+ K++ D WK + +I SGHE PGEGEHKIM+YIR
Sbjct: 134 TLFMKRLSEQLKYFINRKVSEDT---------NWKGIEIIFSGHEVPGEGEHKIMEYIRL 184
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K++PDY PN+RHCLYGLDADLIMLGL +H+P+F LLREEV F + K EE
Sbjct: 185 SKAQPDYEPNLRHCLYGLDADLIMLGLLSHDPHFCLLREEVLFGSVKKKKQEL----EEQ 240
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F+L+HL L+R+YLE+EF +L + +FP++ E IIDD++L+ F +GNDF+P+LP LHI
Sbjct: 241 NFYLMHLCLLREYLEMEFQEL--TNIPNFPYNFEKIIDDFILLAFFVGNDFLPHLPKLHI 298
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GAL L++K+Y++V+P GYIN G +NL+R L +L + E FR + D ++
Sbjct: 299 NEGALALVFKIYKKVIPKARGYINNAGVINLERLALVLEELEKQEREDFRNELEDKNWVG 358
Query: 438 GKMGKKFSDVFHKEK-------------------SKEMDPDLAALIKATDDDY------- 471
K + +++K S D + + K DD Y
Sbjct: 359 SKKKGLLTMTSNQKKLFLEMERFVSGNLETLVLPSTLSATDRSFVFKMADDFYVKCTKYT 418
Query: 472 ---------------DDGTE-------EVLNYANYEEYYYSDEDEEWRTNFFSE-FGQHK 508
++G E E+ Y N +D F E + + K
Sbjct: 419 IENEKYLRFEKDNKVENGNEIKDIIDRELSRYKNAIILDIEKDDSHKEDAIFEEKWIKWK 478
Query: 509 TDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKD 568
YY KL ++ + L++ AE YI +QW L YYY G SWSW+Y +HY+P +SDIK
Sbjct: 479 DSYYIEKLGFSINDTKKLKEMAENYIEGLQWVLFYYYRGVSSWSWFYKYHYSPKVSDIKK 538
Query: 569 FSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLN 628
NL + +G PF PF+QL+AVLP SK+L+P+P+ +LM E SPI ++YPE+F D+N
Sbjct: 539 GFAANLSFTLGTPFKPFEQLMAVLPERSKKLVPKPFADLMVNETSPIRDFYPEDFELDMN 598
Query: 629 GKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAP 688
KK WEA+ IPFI+E L+ + A EHLLTDEE++RN G + YTY NL P
Sbjct: 599 DKKASWEAIAKIPFINEELLLSVIKAKEHLLTDEEKNRNTFGHNIKYTYDE-NLDYIYVP 657
Query: 689 --DYFPAINENHAVEKPLYRDDIYVHPNKLR-----KGLCQDVNL-KLYVTHFPTLKHVQ 740
D FP I H + ++Y +P L GLC+ VNL FPTL +
Sbjct: 658 YIDVFPLIPHCHC------KAEVYKYPEILGVEQFIYGLCKGVNLGNTSPAGFPTLNTLP 711
Query: 741 FTHKIENAKVKVFQQPSRNES-IIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQ 799
T+ +++ V VF+ SRNES III+Q++V + ++++ A + +GK +F+ +P+L E R+
Sbjct: 712 HTNYLDHQGVNVFKSESRNESMIIIIQNQVDLETVEEFAQKKIGKRVFVGWPYLHEARLN 771
Query: 800 AVATKDSRIS--FDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYG 857
A++T++ R F + V + A++ + Y GV I + + +
Sbjct: 772 AISTEEFRYEGVFSPENSIVTVSKTHNDSAAWKKVALRLESNYKKHYGVIINTVQAIAHV 831
Query: 858 QPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAV--LNLQQARESLEYKTIDEIF---- 911
++ +R T A + N Q L+ ++E+F
Sbjct: 832 SMLKG-----------------LRKTENGASEKDYEPCNSQNPEHPLQL-VLNEVFVEDS 873
Query: 912 -------------YP-GCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSD 956
YP G + F L +YG + +N I Q +EP+
Sbjct: 874 RYIEKPPLDIKQEYPLGSRGFFLGEYNYGRP---LEITAHKNGKIDCWIATQTREPEFGK 930
Query: 957 LVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRK 1016
L+ + Y PSY A + ++ + S+ S F+I + + N+GLN+K+ K
Sbjct: 931 LIFQKFSKRTVYYPSYVAAKIVGLTGIAFSKLMSSFFVIVDKQ----KVNLGLNLKYEAK 986
Query: 1017 NEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQG 1076
+V+G++R+ T K W YT++ + LI+ Y K+FP+ ++ H DDI L + + P +
Sbjct: 987 KIKVLGYSRK--TEKGWEYTQEAINLIQEYKKRFPDFVLSVQSHVFDDIPLINKLIPEKN 1044
Query: 1077 -EQRVAQIVSWLK-EQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPN 1134
+++V +I SWLK E +D + ++E +D K+ + I LF P
Sbjct: 1045 YKEKVKEIRSWLKIINEENNFEKVSLDVEQLDQLSMQMVEKELD---KISENIPLFT-PR 1100
Query: 1135 KL------YIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYD 1188
++ I KP+ +L D +F L DRVV + D VP+ +G ++ +
Sbjct: 1101 RINNVPRNAILKPSQCELRLQ-DQEFSLGDRVVYVHDSGKVPIATKGIVV------RTGK 1153
Query: 1189 AMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
+ D++FD PF G + +CS RG + ++NL+
Sbjct: 1154 KVIDIIFDVPFMSGTTLGGKCSAYRGLSVETHFLLNLT 1191
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFR+ISERYP S+++ E ++PEFDNLYLDMNGIIHNC+H ++N I E +
Sbjct: 1 MGIPKFFRWISERYPMCSQLITEKRVPEFDNLYLDMNGIIHNCTHMDENKK--EIPENEA 58
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF YIE LF I+PKKLFF+++DGVAPRAKMNQQR RRF++AKEA L Q+ KGE
Sbjct: 59 FLAIFKYIEHLFGTIKPKKLFFLSVDGVAPRAKMNQQRSRRFKAAKEAYELYQEKISKGE 118
Query: 121 RLPTE 125
+P +
Sbjct: 119 DVPKD 123
>gi|358392275|gb|EHK41679.1| hypothetical protein TRIATDRAFT_228664 [Trichoderma atroviride IMI
206040]
Length = 1391
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 446/1310 (34%), Positives = 653/1310 (49%), Gaps = 184/1310 (14%)
Query: 3 VPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPN-DNDPHFRITEKQIF 61
VPKFFR++SERYP +S+V+ E +IPEFD LYLDMNGIIHNC+H + D FR++E+++F
Sbjct: 9 VPKFFRWLSERYPAISQVIAENRIPEFDCLYLDMNGIIHNCTHKDAGEDTTFRLSEEEMF 68
Query: 62 QDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGER 121
IF+YIE LF I+PKKLFFMAIDGVAPRAKMNQQR RRFR+A + E KA +G
Sbjct: 69 IRIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTALDVEKARDKAIREGVE 128
Query: 122 LPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 181
LP E+ FD C FM AK++QQ
Sbjct: 129 LPKEEPFD----SNCITPGTEFM--------AKLSQQ----------------------- 153
Query: 182 RLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILSG 240
LRYFV KI+ D W+ C V+LSG
Sbjct: 154 --------------------------LRYFVNKKISEDTDWQG----------CDVVLSG 177
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HE PGEGEHKIM+YIR K++P+Y+PN+RHCLYGLDADLIMLGL +H+P+F LLREEV F
Sbjct: 178 HEVPGEGEHKIMEYIRNAKAQPNYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVTF 237
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
S ++ E F+LLHL ++R+YLE+EF +L+ G L F F +E +IDD++LM
Sbjct: 238 GRASKTKSKEL---EHQNFYLLHLCIVREYLEMEFQELQNKGALKFQFDLERVIDDFILM 294
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F +GNDF+PNLP LHI GAL ++++Y+ VLP +GYINE G ++L R ++ L +L+
Sbjct: 295 AFFVGNDFLPNLPGLHINEGALANMFRIYKSVLPQCEGYINENGVIHLDRLQRLLDELSK 354
Query: 421 FDFEQFREKYADIQY---------LEGKMGKK-------------FSDVFHKEK------ 452
+ + F + +D Q+ LE K G K F K+K
Sbjct: 355 TELDNFEYEVSDQQWFASKQMENKLEQKNGAKPRSKKNNQLIMTSFQRDLWKQKIRPFIS 414
Query: 453 SKEMDP-DLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEF------- 504
++ P DL + +KA D + E ++ + + EDEE F
Sbjct: 415 NRSQQPLDLGSDLKAADRKFAQDLAESMHLQ-----WSTKEDEEGNRRLVIAFPPKKETS 469
Query: 505 ------------GQHKTDYYHYKLDYAKVTNEVLRDQ-AECYIRAIQ-WNLHYYYNGCVS 550
++ + K A V+ E + Q E Y + Q W YY
Sbjct: 470 DGEDDDEEEGNLAAYRVMKSYDKATIADVSPEDAQKQYEELYQQKYQGWKTKYYLQKFEE 529
Query: 551 WSW-YYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMT 609
W Y + + LN K +G+PF P +QL+ VLP SK+++P Y +LMT
Sbjct: 530 WPQDKYEEEQKRLCENYGLGADLNFK--LGQPFKPNEQLMGVLPDRSKKIVPAVYHDLMT 587
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
NSPI+++YP +F D+NGKK +WEAVV IPFIDE +L+ AM LL+D++++RN
Sbjct: 588 NANSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEARLLAAMAPQNELLSDDQKARNGF 647
Query: 670 GPMLVYTYS---NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQ 722
G L +TYS N + L P FP I H +E +I+ PN + GL
Sbjct: 648 GVPLKFTYSPEVNFTYPSPL-PGVFPEIQYCHCIE------NIFDLPNIEGLEYVSGLTN 700
Query: 723 D--VNLKLYVTHFPTLKHVQFTHK-IENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVAD 779
VN+K + FPTL + T + +E V VFQQ SRN S+I+ ++ + +
Sbjct: 701 GALVNIKA-LAGFPTLHTLPHTAQLVEGYGVNVFQQDSRNPSVIVTLTDTEMRTKVETWK 759
Query: 780 QILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVF-----ERAAKDMQDAFQLSKK 834
+ LG+ F+ YP + E RV V + ++ V RAA D + +
Sbjct: 760 KKLGQRCFVGYPFIQEARVIKVQDELFTYELAEDEETVVTKDHDNRAASD----YAKEAE 815
Query: 835 SITDGYYTKLGVDIGNTEVLVYGQPVESR-KYFFGPRGKVTQQRTFIRSTVTYAYQSAVL 893
+ + + +LG+ +G E LV+ ++ K G K + +R YA Q+ V
Sbjct: 816 FLENWHAKRLGITVGQVECLVHVHMLKGLIKTEDGALIKEYAENPSLRK--VYASQTIVE 873
Query: 894 NLQQARESLEYK---TIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQ 950
+ E + I+E F G + F L YG V V + + + L K +
Sbjct: 874 EVVNEDERFIERPALPIEEEFPQGTRAFFLGEFAYGRPLEVTGHVNGKANIMVLVPK-NK 932
Query: 951 EPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLN 1010
EP+++ + Q + Y PS+ +A +L + PL+LS+ T S +I + N
Sbjct: 933 EPEITKKIIFQAERSNPYTPSFAIAKQLGVHPLILSKITSSYQVISAAGLKLNLGL---N 989
Query: 1011 IKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDD 1070
+KF + +V+G++R+ ET W ++ V LI +YM FP+ F ++ D
Sbjct: 990 LKFEGRKLKVLGYSRKSETG--WEFSGLAVKLIADYMVAFPDFFAAIQREPQRSEISESD 1047
Query: 1071 VFP--HQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQI- 1127
++ QR+ IV+WLK+Q +K E P A +D+ +V + A + + +
Sbjct: 1048 LWSDLSVASQRIKDIVAWLKKQETSKFERVPLDAEQLDSGIVMALATAGEQLHQASMEAT 1107
Query: 1128 --TLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGET 1185
TL P + KP ++ T FKL DRV I VPLG RGT+ GI + T
Sbjct: 1108 AKTLNSVPRTALL-KPADAEMVLGNQT-FKLGDRVTFIAAAGKVPLGTRGTVAGISRTAT 1165
Query: 1186 SYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNS 1233
+ + DVV+D F G + R RG + + ++N++ + + +S
Sbjct: 1166 AI--LLDVVWDTSFMSGTTLGERAPMFRGQTVSSSTVLNITNWQVVSASS 1213
>gi|328719013|ref|XP_001945621.2| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Acyrthosiphon
pisum]
Length = 1358
Score = 621 bits (1602), Expect = e-174, Method: Compositional matrix adjust.
Identities = 342/848 (40%), Positives = 516/848 (60%), Gaps = 38/848 (4%)
Query: 399 YINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDP 458
Y+NE G LNLKRF+KF+ LA+FD++QFR+ +ADI++LEGK +
Sbjct: 1 YLNEQGTLNLKRFQKFMETLANFDYDQFRDTFADIKFLEGKRTANTTTSNKVNNDPAYKD 60
Query: 459 DLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDY 518
+LAALIK TD ++ + +E + +EF HK +YY KLDY
Sbjct: 61 ELAALIKDTDRILLSDDDDE-----------EEFEETEDESIMAEFNLHKENYYKNKLDY 109
Query: 519 AKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEM 578
+T++V+R QAE YIRA+QWNL+YYYNGC SW+WYYPHHYAPYISDIK F +L + +++
Sbjct: 110 NVITDDVMRSQAEGYIRALQWNLNYYYNGCCSWAWYYPHHYAPYISDIKGFENLKIDFDL 169
Query: 579 GEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVV 638
G+PFLP++QLLAVLP+ SKELLP+P+Q+LMT E SPI YYPE+F TDLNGK+ +WEAVV
Sbjct: 170 GQPFLPYEQLLAVLPSLSKELLPKPFQDLMTEEASPIRLYYPEKFETDLNGKQHEWEAVV 229
Query: 639 LIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENH 698
LIPFIDE LIK+M VEH LT +E++RN HGPM ++ YS NLGT YFP+I +NH
Sbjct: 230 LIPFIDEETLIKSMKMVEHKLTADEKNRNTHGPMHLFKYSKKNLGTGSISKYFPSIEDNH 289
Query: 699 AVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSR 758
A + ++R+DI+V + L KGLC + + +Y FP+L + T +++ VKVFQ PS
Sbjct: 290 AEKIAIHREDIFVDISDLVKGLCPGLQMDVYHVGFPSLHLIPITAQLQRRNVKVFQSPSL 349
Query: 759 NESIIIV---QDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSG 815
E++II +D+ + S++ +A ++LG T+++N+PHL EI+V AV+ ++SF+++
Sbjct: 350 GENMIIKIDNKDENDIESIQHIAKELLGNTLYVNWPHLEEIKVTAVSNTTVKLSFNEDEQ 409
Query: 816 PVF-ERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPR---G 871
+ E + D+Q+ F L + I + T G++IG T VL+ G ++ K F PR
Sbjct: 410 LIIREMSETDVQE-FNLLAQGIAKMFITTRGIEIGKTHVLLRGHTLKGTK--FVPRQDGS 466
Query: 872 KVTQQRTFIRSTVTYAYQSAVLNLQQARESLE--YKTIDEIFYPGCQCFALSNPHYGSGG 929
V + + T AYQ++V L+ SL+ Y +++E F G + F L P YG
Sbjct: 467 GVDLTKVWNEIPTTIAYQTSVPGLEVIDPSLKESYFSLEEYFPIGSKVFVLDAPFYGCQA 526
Query: 930 CVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFT 989
V+ +S +K++ ++ EP + DL + + T ASKLSI+ LL++ T
Sbjct: 527 DVLGGFI--SSRVKINILLEPEPYIYDLKERLESVSTELFYANTAASKLSINSHLLAKIT 584
Query: 990 GSIFIIDSTEE--GAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYM 1047
G+IF+ T E K+ NIG+N+K +++NEEVVG+T++ + W Y+++ + L+ Y+
Sbjct: 585 GTIFLAIETYEDRNEKKMNIGMNLKSNKRNEEVVGYTKKFDNV--WMYSQKTIDLLGEYI 642
Query: 1048 KQFPEVFG-FLKDHSSDDIYLRDDVFPHQG--EQRVAQIVSWLKEQPHAKAEVRPCGAAV 1104
++FPE+ L ++ D + +D+FP+ +Q++ + WL E + + CG+
Sbjct: 643 QRFPELINVLLSTENTKDTFSSEDMFPNPSTRKQKLDDLKKWLSEIRSLTKDKQTCGS-- 700
Query: 1105 VDAKVVSLIEHAVDTC----EKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRV 1160
++ V+ IE +D K +K +TL VK L+ P LDKL D ++ DRV
Sbjct: 701 MEPSKVAAIEKYMDEFIAENLKHKKTVTLSVKSQNLFKPISKLDKLKADEGADTRVLDRV 760
Query: 1161 VNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAM 1220
V IR Y VPLG++GT++ I + + +Y V+FDK FP+ V S SRGY++ +
Sbjct: 761 VCIRSSYQVPLGFKGTVVSISKSNIDTEVVYSVIFDKEFPNSVSFGGSTSRGYKLCRMSF 820
Query: 1221 INLSYGER 1228
INLS+ R
Sbjct: 821 INLSHAIR 828
>gi|429857774|gb|ELA32622.1| exonuclease kem1 [Colletotrichum gloeosporioides Nara gc5]
Length = 1398
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 417/1204 (34%), Positives = 638/1204 (52%), Gaps = 143/1204 (11%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE KA +G +P E FDSNCITPG
Sbjct: 78 PKQLFFMAIDGVAPRAKMNQQRARRFRTALDAEKARDKAISEGVEMPKEPPFDSNCITPG 137
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILSGHETPGEGEHKIMDYIR 256
T FM +L QQL+YFV K++ D W+ C ++LSGHE PGEGEHKIM+YIR
Sbjct: 138 TEFMAKLTQQLKYFVNKKVSEDADWQG----------CEIVLSGHEVPGEGEHKIMEYIR 187
Query: 257 YMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEE 316
K++P+Y+PN+RHCLYGLDADLIMLGL +H+P+F LLREEV F + ++ E
Sbjct: 188 NAKAQPEYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRHNKNKAREL---EH 244
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F+L+HL ++R+YLELEF +L+EPG L FPF +E +IDD++LM F +GNDF+PNLP LH
Sbjct: 245 QNFYLMHLCIVREYLELEFQELQEPGKLGFPFDLERVIDDFILMAFFVGNDFLPNLPRLH 304
Query: 377 IINGALPLLYKVYQEVL---------------PTLDGYINEGGYLNLKRFEK-------F 414
I GAL ++++Y+++L P L + E G ++ FE F
Sbjct: 305 INEGALAAMFRIYKDILPKGDGYINEGGIINLPRLQKLLEELGKDEIESFENDASNEKWF 364
Query: 415 LTK-------------------LASFDFEQFREKY---------------ADIQYLEGKM 440
+K L S + +++K + + K
Sbjct: 365 QSKRSAEPNGVDNKKSKAKGLVLTSSQRDLWKQKIRPYVNKPSSEPLDLGTSLNAADRKF 424
Query: 441 GKKFSDVFHKEKSKEMDPDL---------AALIKATDDDYDDGTEEVLNYA-NYEEYYYS 490
+ +D H E S + D D +++ +D+ ++GT + NY++
Sbjct: 425 VQDLADTLHIEWSTKEDDDGHRHLLLSFPEGAVESLNDEEEEGTLALYRVVRNYDKALVV 484
Query: 491 D---EDEE--WRTNFFSEFGQHKTDYYHYKL-DYAKVT-NEVLRDQAECYIRAIQWNLHY 543
D ED + ++ + +++ KT YY K ++ + + ++ L E Y++ +QW LHY
Sbjct: 485 DITPEDAQRHYQELYDTKYQAWKTKYYLEKFPEWPQESYDKELVKLCENYVQGLQWVLHY 544
Query: 544 YYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEP 603
YY+G SW W+Y +HY+P SD+ +LK+ +G+PF P++QL+ VLP SK ++PE
Sbjct: 545 YYHGIASWPWFYQYHYSPLTSDVVKGLGADLKFTLGQPFRPYEQLMGVLPDRSKSIVPEV 604
Query: 604 YQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEE 663
Y +LMT NSPI ++YP +F D+NGKK +WEA+V IPFIDE +L+ AM L+ +E
Sbjct: 605 YWDLMTNPNSPIYDFYPRDFELDMNGKKMEWEAIVKIPFIDEKRLLSAMATKNDQLSQQE 664
Query: 664 RSRNRHG--------PMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN- 714
+SRN G P + YTY + +G FP I+ H +E +I+ PN
Sbjct: 665 KSRNGFGVALKFTYNPEVAYTYPSSLVGV------FPEISPCHCIE------NIFELPNT 712
Query: 715 ---KLRKGLCQDVNLKL-YVTHFPTLKHVQFTHK-IENAKVKVFQQPSRNESIIIVQDKV 769
RKGL + + + + FPTL ++ +T +E+ V VFQ S+N S+II
Sbjct: 713 EGLNFRKGLVEGAKINIDALAGFPTLHNLPYTAMLVEHYGVNVFQADSKNPSMIITLTDS 772
Query: 770 QVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAF 829
++ + +VA LGK F+ YP L E ++ V+ + D G V R D ++
Sbjct: 773 EMRTKAEVAKAKLGKRCFVGYPFLQEAKIVKVSDELFDYELDGRDGSVITRHHGD-REIR 831
Query: 830 QLSKKS--ITDGYYTKLGVDIGNTEVLVYGQPVESR-KYFFGPRGKVTQQRTFIRSTVTY 886
+ SK++ I + + +LG IG E LV ++ K G K + +RS Y
Sbjct: 832 EWSKEAAYIENWHAKRLGFTIGTVESLVQVHMLKGLIKTEEGALIKEYAENPSMRS--IY 889
Query: 887 AYQSAVLNLQQARESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIK 943
A Q+ V + E K I+E + G Q F L YG V + +
Sbjct: 890 ASQTIVDEVVNEDERFIEKAAVPIEEEYPVGTQAFFLGEFQYGRALEVTGHANNKANIRV 949
Query: 944 LSFKVQQEPDLSDLVHLQDDTVYN-YLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGA 1002
L+ K +EPD + + +QD N Y PSY VA L++ PL+LS+ S + I++ G
Sbjct: 950 LALK-NKEPDFAKPI-IQDMKRQNRYTPSYAVAKMLNLHPLILSKILSS-YQINTV--GG 1004
Query: 1003 KRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDH-- 1060
R N+GLN+KF K ++V+G++++ ++ W ++ + L+ Y+ FP+ F ++ +
Sbjct: 1005 LRVNLGLNLKFDAKKQKVLGYSQKSDSG--WEFSNAAIELLARYIAAFPDFFAAIQQNPQ 1062
Query: 1061 SSD--DIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVV-SLIEHAV 1117
SSD D L D P RV +I +WLK +K E P A +D+ VV L E
Sbjct: 1063 SSDVSDTDLWKD--PKVAAARVKEIGAWLKSAQTSKFERVPLDAEQLDSVVVMRLAEEGA 1120
Query: 1118 DT-CEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGT 1176
+ E ++ + I KP+ +L + +F L DRV + VPLG RGT
Sbjct: 1121 NVFTNSHEVEVKNMKGVPRSAIMKPSDAELFLS-NQRFALGDRVSFLSSSGKVPLGSRGT 1179
Query: 1177 IIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSN 1234
++G+ + T+ + DVV+D F G + RC RG + + +++N ++ + + G+
Sbjct: 1180 VVGLSR--TANHVLLDVVWDLTFMSGTTLGDRCPPFRGMTVYSSSVLNTTHKQVVSGSKA 1237
Query: 1235 PHVK 1238
+++
Sbjct: 1238 GNLR 1241
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/441 (46%), Positives = 274/441 (62%), Gaps = 76/441 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDN-DPHFRITEKQ 59
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + D FR++E++
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDTGEDTTFRLSEEE 60
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+F IF+YIE LF I+PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE KA +G
Sbjct: 61 MFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARRFRTALDAEKARDKAISEG 120
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 179
+P E FD C FM AK+ QQ
Sbjct: 121 VEMPKEPPFD----SNCITPGTEFM--------AKLTQQ--------------------- 147
Query: 180 GERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VIL 238
L+YFV K++ D W+ C ++L
Sbjct: 148 ----------------------------LKYFVNKKVSEDADWQG----------CEIVL 169
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P+Y+PN+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 170 SGHEVPGEGEHKIMEYIRNAKAQPEYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 229
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F + ++ E F+L+HL ++R+YLELEF +L+EPG L FPF +E +IDD++
Sbjct: 230 TFGRHNKNKAREL---EHQNFYLMHLCIVREYLELEFQELQEPGKLGFPFDLERVIDDFI 286
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP LHI GAL ++++Y+++LP DGYINEGG +NL R +K L +L
Sbjct: 287 LMAFFVGNDFLPNLPRLHINEGALAAMFRIYKDILPKGDGYINEGGIINLPRLQKLLEEL 346
Query: 419 ASFDFEQFREKYADIQYLEGK 439
+ E F ++ ++ + K
Sbjct: 347 GKDEIESFENDASNEKWFQSK 367
>gi|213407328|ref|XP_002174435.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
gi|212002482|gb|EEB08142.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
Length = 1322
Score = 605 bits (1559), Expect = e-169, Method: Compositional matrix adjust.
Identities = 409/1187 (34%), Positives = 612/1187 (51%), Gaps = 164/1187 (13%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKKL +MA+DG APRAKMNQQR RRFR+AK+A +KA+ GE + E FDSNCITPG
Sbjct: 77 PKKLLYMAVDGCAPRAKMNQQRSRRFRTAKDAYDARRKAERNGEVI-AEDPFDSNCITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM R+ +QL YF++ K++ D W V +ILSGH+ PGEGEHKIM+YIR
Sbjct: 136 TVFMQRISEQLHYFIQKKVSEDS---------DWSGVQIILSGHDCPGEGEHKIMEYIRT 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K++P+YNPN RHCLYGLDADLIMLGL +H+P+F LLREEV F ++
Sbjct: 187 QKAQPNYNPNTRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGPARKSASKELAN---Q 243
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
KF+LLHLSL+R+YLE EF + ++ L F + +E IIDD++L+ F +GNDF+PNLP LHI
Sbjct: 244 KFYLLHLSLLREYLEAEFEECRDN--LPFAYDLERIIDDFILLAFFVGNDFLPNLPGLHI 301
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA------------------ 419
GAL L++ VY+ VLP ++GYINE G +N+ R + L +L
Sbjct: 302 NEGALALMFNVYKSVLPLMEGYINEAGVINMDRLDLVLLELEKFEKAVFKEECYSSNADG 361
Query: 420 ---SFDFEQF----------------------------REKYADI------------QYL 436
+FDF QF RE+Y DI + L
Sbjct: 362 EAPAFDFNQFLRNNNKDPSYLTVKQKELYCLLKKFLYSREQYLDITDKLSSEDTRFLRRL 421
Query: 437 EGKMGKKFSDVFHKEKSKEMD---PDLAALIKATDDDYDDGTEEVL---NYANYEEYYYS 490
K+G S V + S + +L DD+ D EVL + N +
Sbjct: 422 ASKLGLMASTVVFADGSSCLRVAFKNLNFSDSEEDDEEQDEIGEVLEKFDKLNIIDNTTK 481
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
D +E+ F F K +YY K+ ++ + L A+ Y+ +QW L YYY GC S
Sbjct: 482 DSEEK----FEKGFEMWKDNYYRSKVGFSYYDEKELEQMAKRYVEGLQWVLFYYYRGCQS 537
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
W W+Y +HY+P ISD++ + ++MG+PF PF+QL+AVLPA SK L+P Y++LMT
Sbjct: 538 WGWFYDYHYSPKISDVRRGLRFGITFDMGKPFRPFEQLMAVLPARSKSLVPPCYRDLMTD 597
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
NSPI+++YPE F D N KK WEAVV IPFI+E +L A+ + EHLLT E RN
Sbjct: 598 PNSPIIDFYPENFELDQNEKKASWEAVVKIPFIEETRLQDALKSREHLLTAAELHRNEFH 657
Query: 671 PMLVYTY--SNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQDV 724
P +++ S + + P+ FP + +H +E Y P+ + R GLC V
Sbjct: 658 PPVLFIKDDSITRVFPSSLPNIFPDL-LSHCIEVN------YSLPSMQGLEYRVGLCPGV 710
Query: 725 NLKLY-VTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQIL 782
L + + FP+ V+ T +I + V VF SRN S+I+ VQ+ ++++A + L
Sbjct: 711 FLGTFGLAGFPSFHTVKHTAEIASKGVNVFGNDSRNPSVIVHVQNIYNSTPVEELAKKYL 770
Query: 783 GKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSI---TDG 839
+ +F+++P+L E + A+ T + + + V E + D L ++ I
Sbjct: 771 NQKVFMDWPYLRESKSVALTTSVQLYTMEDGNLNVRELTS----DEISLRRRKIETLNRT 826
Query: 840 YYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS-------TVTYAYQSAV 892
Y+ + GV +G +V++ P++ ++ T+ I+S +
Sbjct: 827 YFKRYGVILGPVDVVLVVHPLKGMQF--------TRDGALIKSFDSDSMEVIPIQILVDK 878
Query: 893 LNLQQARESLEYKTIDEIFYP-GCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQE 951
+ ++ AR + E+ +P G + F L +YG V T ++N KLS +
Sbjct: 879 IAIEDARYTEREAPPVELEFPVGTKVFNLGEYNYGRPAQV--TQCKDN---KLSIWLSTA 933
Query: 952 PDL------SDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRH 1005
P L + + Q V Y PSY VA KL + PL LS+ T S F+I+ + ++
Sbjct: 934 PGLDATWGTAIVRAFQHSEV--YYPSYIVARKLGLHPLALSKIT-SRFVINVDK---RQE 987
Query: 1006 NIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDI 1065
N+GL++KF + +V+G+TR+ T W ++E + L+ YM FP+ F L S D
Sbjct: 988 NVGLSLKFDARQLKVIGYTRK--TQSGWEFSEAAIKLLAEYMHAFPDFFQALNRLPSKDS 1045
Query: 1066 YLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEK 1125
D FPH + +VA + WLK+ ++ + + + IE D+ +
Sbjct: 1046 LTAKDYFPHDDKGKVAAMKQWLKQNKVSEFTRVSLSDYSLTKEAIQQIEAKADSIDAT-- 1103
Query: 1126 QITLFVKPNKLY------IPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIG 1179
F P K++ + KP+ T F L DR+V ++D VP+ GT++G
Sbjct: 1104 ----FQVPKKVFGVPRYAVLKPSQAAHVLHSQT-FALGDRIVYVQDSGKVPIAAYGTVVG 1158
Query: 1180 IVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
I + +VVFD PF G + +CS RG ++ ++N++
Sbjct: 1159 ISTHQL------EVVFDLPFMSGTTLDGKCSPYRGMQLDPSTVLNIT 1199
Score = 163 bits (413), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 100/129 (77%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFR++SERYP S++V++ +IPEFDNLYLDMNGI+HNC+H ND+ + E Q+
Sbjct: 1 MGIPKFFRWMSERYPLCSQLVQDDRIPEFDNLYLDMNGILHNCTHKNDDHSSAALPEDQM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ IF+YIE LF+ I+PKKL +MA+DG APRAKMNQQR RRFR+AK+A +KA+ GE
Sbjct: 61 YIAIFNYIEHLFQKIKPKKLLYMAVDGCAPRAKMNQQRSRRFRTAKDAYDARRKAERNGE 120
Query: 121 RLPTEKRFD 129
+ E FD
Sbjct: 121 VI-AEDPFD 128
>gi|348581618|ref|XP_003476574.1| PREDICTED: 5'-3' exoribonuclease 1-like [Cavia porcellus]
Length = 1639
Score = 598 bits (1541), Expect = e-167, Method: Compositional matrix adjust.
Identities = 333/874 (38%), Positives = 505/874 (57%), Gaps = 58/874 (6%)
Query: 396 LDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEK--- 452
G +LNL R+EK + K + FD E F E + D+++ E K+G K+ +
Sbjct: 230 FGGKKTHSAHLNLTRYEKSIVKRSEFDREHFSEVFVDLKWFESKVGNKYLNEAAGIAAEE 289
Query: 453 -----------SKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFF 501
+E AAL D +G E V++ N E+ ED++ F
Sbjct: 290 AKNYKEKKKSKGQENSVCWAAL------DKSEG-EMVVSKDNLED---ETEDDDL---FE 336
Query: 502 SEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAP 561
+EF Q+K YY K+ V+++ L DQA CY++AIQW LHYYY+G SWSW+YP+HYAP
Sbjct: 337 TEFRQYKRTYYMTKMGVDVVSDDFLADQAVCYVQAIQWILHYYYHGVQSWSWFYPYHYAP 396
Query: 562 YISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP YQ+LMT E+SPI+EYYP
Sbjct: 397 FLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPVCYQHLMTSEDSPIIEYYPP 456
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVN 681
+F TDLNGK+Q+WEAVVLIPFIDE +L++AM+A H L +EER RNRH L+ Y
Sbjct: 457 DFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKEEERKRNRHSECLMCWYDKDT 516
Query: 682 LGT--ALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHV 739
T + P+ FPAI + K + D +V NK + + + LY FPTLKH+
Sbjct: 517 EFTYPSPWPEKFPAIERCYTRYKIISLDAWHVDINKNK--ITRVDQKALYFCGFPTLKHI 574
Query: 740 QFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQVADQILGKTIFINYPHLIEI 796
+ ++ + V+VFQQ SR E++ I+V + S++ VA +LGK++F+N+PHL E
Sbjct: 575 KHKFFLKKSGVQVFQQSSRGENMMLEILVNAESDELSIENVASSVLGKSVFVNWPHLEEA 634
Query: 797 RVQAVATKDSRISFDKNSG------------PVFERAAKDMQDAFQLSKKSITDGYYTKL 844
RV AV+ +++ ++ G R Q + + I++ Y +
Sbjct: 635 RVVAVSDGETKFYLEEPPGTQKLYLGRTAPPSKVMRLGDKEQSNWIKEVQGISEHYLRRK 694
Query: 845 GVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESL-E 903
G+ I T +VY Q + RKY G+V ++ + + + + YQ+ V +++
Sbjct: 695 GIIINETSTIVYAQLLTGRKYQINHNGEVHLEKQWSKQILPFVYQTIVNDIRAFNSRFSS 754
Query: 904 YKTIDEIFYPGCQCFALSNPHYGSGGCV-ISTVKEENSFIKLSFKVQQEPDLSDLVHLQD 962
KT+D++F PG F L P+YG G V +S I++ F + EP+L L+ Q
Sbjct: 755 IKTLDDLFPPGSVVFMLGTPYYGCTGEVQVSGDVITEGRIRVVFSIPCEPNLEALIQNQH 814
Query: 963 DTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE---EGAKRHNIGLNIKFSRKNEE 1019
Y P Y +AS+L +S L+SRFTGSIFI + G + N+GLN+KF++KNEE
Sbjct: 815 KYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANVGLNLKFNKKNEE 874
Query: 1020 VVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ---G 1076
V G+T++ +W Y+ L+ Y+++ PE+F ++ +S +D++ DD++P + G
Sbjct: 875 VPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSYIAKNSQEDVFYEDDIWPGENENG 932
Query: 1077 EQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCE--KVEKQITLFVKPN 1134
++V +I++WLK P + C ++DA +V IE VD C+ K K++ + VKP+
Sbjct: 933 AEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVDKCKQRKNNKKVRVTVKPH 992
Query: 1135 KLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVV 1194
LY P + PD D +F+LFDRVVN+R+ ++VP+G RGTIIGI D +++V+
Sbjct: 993 LLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPIGLRGTIIGIKGANREADVLFEVL 1052
Query: 1195 FDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
FD+ FP G+ IRCS +GYR+P A++NLS+G R
Sbjct: 1053 FDEEFPGGLTIRCSPGKGYRLPTSALVNLSHGSR 1086
Score = 249 bits (635), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/173 (67%), Positives = 136/173 (78%), Gaps = 9/173 (5%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTK 303
IM++IR K+K D++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K
Sbjct: 181 IMEFIRSEKAKQDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGK 233
Score = 232 bits (592), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|448107259|ref|XP_004205309.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|448110212|ref|XP_004201573.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|359382364|emb|CCE81201.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|359383129|emb|CCE80436.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
Length = 1508
Score = 597 bits (1540), Expect = e-167, Method: Compositional matrix adjust.
Identities = 406/1191 (34%), Positives = 608/1191 (51%), Gaps = 135/1191 (11%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P K+F+MAIDGVAPRAKMNQQR RRFR+A EAE+ +KA + G +P E FDSN ITPG
Sbjct: 76 PNKVFYMAIDGVAPRAKMNQQRARRFRTAYEAELNLKKAIQDGAEIPKEDPFDSNAITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L L+YF+ KIT D W + V +ILSGHE PGEGEHKIM+YIR
Sbjct: 136 TEFMAKLTDNLKYFIHKKITEDSRWAN---------VQIILSGHEVPGEGEHKIMEYIRT 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
MK++PD PN+RHC+YGLDADLIMLGL +H P+F+LLREEV F +S K S I +
Sbjct: 187 MKNQPDAEPNLRHCIYGLDADLIMLGLVSHYPHFALLREEVTFGPRSQKKSSDI---NDQ 243
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
KF+LLHLSL+R+YL LEF L L+F ++ E ++DD++L+ ++IGNDF+PNLPDLH+
Sbjct: 244 KFYLLHLSLLREYLSLEFRDLDTE--LNFEYNFERVLDDFILIMYVIGNDFLPNLPDLHL 301
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASF----------DFEQFR 427
GA PL+ + +++ L DGY+NE G +NLKR + +L L+ F D E F
Sbjct: 302 NKGAFPLILETFKQALRQCDGYLNENGTINLKRLDIWLHILSEFELENFEKQDIDVEWFN 361
Query: 428 EKYADIQYLEGK----MGK------------------------KFSDVF----------- 448
++ DI K MGK K SD+
Sbjct: 362 KRLEDISITGEKRRERMGKLLILKDQKKLVGMIKPWLLEICNTKISDLIKLANEDKLPTL 421
Query: 449 ---------HKEKSKEMDPDLAALI--KATDDDYD-----DGT----------EEVLNYA 482
H E K D+ LI + D Y+ DGT E + N
Sbjct: 422 ELPREESEKHIEFLKMFALDVGILIVHSRSKDTYEVRLDVDGTPPDESDEEHEERLANIR 481
Query: 483 NYEEYYYS-------DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIR 535
+ Y S D +E + + S+F K YY K+ ++ E L D + Y+
Sbjct: 482 KIIKRYQSANLVETEDLLKESKDVYDSKFMNWKDQYYKEKVHFSINDKENLVDMTQNYVE 541
Query: 536 AIQWNLHYYYNGCVSWSWYYPHHYAPYISDI----KDFSHLN--LKYEMGEPFLPFQQLL 589
+QW L+YYY GC SW+W+Y +HYAP ISDI +++ N +K+E PF PF+QL+
Sbjct: 542 GLQWVLYYYYKGCPSWNWFYRYHYAPRISDIHVGVEEYVKTNHKIKFEKSTPFKPFEQLM 601
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
AVLPA S++L+P Y+ LMT SP++++YP E D+NGKK WEAVVL+ F+DE +L+
Sbjct: 602 AVLPARSRKLMPIVYRQLMTDPASPLIDFYPAEVDIDMNGKKASWEAVVLLSFVDEKRLL 661
Query: 650 KAMDAVEHLLTDEERSRNRHGPMLVYTYSNV--NLGTALAPDYFPAINENHAVEKPLYRD 707
A+ E LT EE+ RN G L + ++ ++ + P +F I + E P
Sbjct: 662 DALKPFEQKLTIEEKRRNSFGTDLRFIFNPQIDHVYPSPLPGFFHDIEHDKCYEDPFILP 721
Query: 708 DIYVHPNKLRKGLCQDVNLKLY-VTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQ 766
++ +++ L + L Y + FPTL + F ++++ +K+FQ PS++ S+I+
Sbjct: 722 EV---KGEIKIELGEGALLGKYSLAGFPTLDTIPFDYELKLHDIKIFQSPSKSVSMILTL 778
Query: 767 DKV-QVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP---VFERAA 822
+ + S+ Q + + LGK ++ +P L E RV +V+ K+SR K V +
Sbjct: 779 KNIWEDLSVHQFSQKFLGKIVYSRWPFLRESRVVSVSDKESRYELVKTQNSRKFVATPLS 838
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
+ A+ S+ + Y G+ + LV QPV RG +TF +
Sbjct: 839 PEEIKAYNQLASSLKETYDRTKGITLKEITGLVSVQPVTG--LIRNERGAYV--KTFSKE 894
Query: 883 TVTYAYQ---SAVLNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEEN 939
Y Q VLN S + I+E F G L YG+ V +
Sbjct: 895 VAVYPLQLIVEEVLNQDARYASRPPQPIEEEFPLGSNVVFLGAFAYGTPASVAGYTDDTK 954
Query: 940 SFIKLS-FKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDST 998
+K+S EP++ + Y+PSY VA +L ++ L LS+ T S F++++
Sbjct: 955 VNVKISKIPSSSEPNIGKKRLEIEKKEIVYVPSYDVAKRLKLNSLFLSKIT-SGFMVEND 1013
Query: 999 EEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLK 1058
+ +R NIGL +KF + ++V+GFTR+ K W ++ + LI++Y +FP+VF L+
Sbjct: 1014 YDNNRRVNIGLELKFEGRRQKVLGFTRKG--GKAWEFSPLAIQLIRDYQSKFPDVFKELQ 1071
Query: 1059 DHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVD---AKVVSLIEH 1115
+ S + +F + ++ ++ W+KE V ++ A + + IE
Sbjct: 1072 EFKSSSMPKASVIF--KSHDKLKEVSKWVKEVKSQLITVSLESESLTKFSYAAIENYIEQ 1129
Query: 1116 AVDTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRG 1175
V + V N + P + L +F+L DRV+ ++D VP +G
Sbjct: 1130 YVSQTPPFSSKDIKGVPRNAILDPAESYQLLS---TQRFELGDRVLYVQDSGKVPYLSKG 1186
Query: 1176 TIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
TI+GI T V+FD P G + + RG + + ++NL+
Sbjct: 1187 TIVGITTLGTK--TSLSVIFDHPLMSGNTMNGKLKSKRGLVVDSSLVLNLT 1235
Score = 171 bits (432), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 100/129 (77%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFR+ISER+P +S+++ QIPEFDNLYLDMN I+H C+H ND D R+TE Q+
Sbjct: 1 MGIPKFFRFISERWPLISQLIDGTQIPEFDNLYLDMNSILHTCTHSND-DTLVRMTEDQM 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ IF YIE LF +I+P K+F+MAIDGVAPRAKMNQQR RRFR+A EAE+ +KA + G
Sbjct: 60 YAAIFTYIEHLFEIIKPNKVFYMAIDGVAPRAKMNQQRARRFRTAYEAELNLKKAIQDGA 119
Query: 121 RLPTEKRFD 129
+P E FD
Sbjct: 120 EIPKEDPFD 128
>gi|156050179|ref|XP_001591051.1| hypothetical protein SS1G_07676 [Sclerotinia sclerotiorum 1980]
gi|154692077|gb|EDN91815.1| hypothetical protein SS1G_07676 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1390
Score = 597 bits (1539), Expect = e-167, Method: Compositional matrix adjust.
Identities = 407/1186 (34%), Positives = 605/1186 (51%), Gaps = 125/1186 (10%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK+LFFMA+DGVAPRAKMNQQR RRFR+A + E +KA +G+ +P E+ FDSN ITPG
Sbjct: 77 PKQLFFMAVDGVAPRAKMNQQRARRFRTALDVENAREKAIREGKEMPKEEAFDSNSITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L QL+YF+ KI+ D W+ T ++LSGHE PGEGEHKIM+YIR
Sbjct: 137 TEFMQKLTLQLKYFIAKKISEDVDWQGT---------EIVLSGHEVPGEGEHKIMEYIRL 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K++PDY+PN RHCLYGLDADLIMLGL +H+P+F LLREEV F +S ++ E
Sbjct: 188 KKAQPDYDPNRRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRQSKAKSKEL---EHQ 244
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F+L+HL ++R+YLELEF +LK GVL FPF +E +IDD++LM F +GNDF+PNLP+LHI
Sbjct: 245 NFYLMHLCIVREYLELEFQELKGDGVLGFPFDLERVIDDFILMAFFVGNDFLPNLPNLHI 304
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GAL L++KVY+ +LP GYINEGG +N+ R L +L+ ++ F + +D + +
Sbjct: 305 NEGALALMFKVYKTILPKGGGYINEGGVINMSRLAILLDELSHVEYRFFESESSDSSWFK 364
Query: 438 GKMGKKFSDVFHKEKSKEM------------------------DPDLAALIKATDDDYDD 473
K K DV K K+K DL+ + A D +
Sbjct: 365 AKQMSK-EDVMVKGKNKGKLVMTTAQQQIWKQVKSYVQKRGTEALDLSEKLPAADRKFAQ 423
Query: 474 GTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHY--------------KLDYA 519
E L + ++ D + + +F ++ G + + D A
Sbjct: 424 DLAESL-HLEWKTVQSDDGERHMQLSFPAKLGADDDEEDDDEEEESQLAIMRIVKQYDKA 482
Query: 520 KVTNEVLRDQAEC-----YIRAIQWNLHYYYNGCVSWS---------------------- 552
+V +V R+QA+ Y Q YY+G W
Sbjct: 483 EVL-DVTREQAQAEMDRKYEEKFQEWKDKYYDGKFEWDRKNETELTNLCENYVQGLQWVL 541
Query: 553 WYY-------PHHY----APYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLP 601
+YY P +Y +P ISD+ ++ +++G+PF PF+QL+ VLP SK+++P
Sbjct: 542 YYYYRGVVSWPWYYQYHYSPMISDVIKGLKADVNFKLGQPFHPFEQLMGVLPDRSKKIVP 601
Query: 602 EPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTD 661
Y +LMT SPI+++YP +F D+NGKK +WEAVV IPFIDE +L+ AM +LL+D
Sbjct: 602 TVYHDLMTNPASPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLDAMATKNNLLSD 661
Query: 662 EERSRNRHGPMLVYTYS---NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRK 718
E++RN G L +TY + ++L FP I H +E D +
Sbjct: 662 AEKARNEFGVSLKFTYDPDVDFTYPSSLV-GIFPDIAHCHCIENIF--DLPTIEGLDFYH 718
Query: 719 GLCQDVNL-KLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQV 777
GL L + FP+L ++ + + V VFQ SRNES+++ + +V + +
Sbjct: 719 GLMDGAKLGSASLAGFPSLNYLPYNATLGFHGVNVFQSDSRNESMVVTIEDCEVRTNVKT 778
Query: 778 ADQILGKTIFINYPHLIEIRVQAVATK--DSRISFDKNSGPVFERAAKDMQDAFQLSKKS 835
A Q LGK +F+ YP L E +V V+ + D S D + P+ D F+ +
Sbjct: 779 AQQKLGKRVFVGYPFLQEGKVVKVSDELFDYLPSEDASGQPISRAHGPREIDDFRKKAER 838
Query: 836 ITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLN 894
I Y +LG+ IG E L + + ++ K G ++ I T YA Q V
Sbjct: 839 IESTYSKRLGIIIGPVESLTHVEMLKGLKKM--DDGATIKEYAVIPGQDTDYASQVVVDE 896
Query: 895 -LQQARESLEYKT--IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQE 951
+ + + LE ++E F + F L + +YG G V + + K ++
Sbjct: 897 VISEDQRFLERAALPVEEEFPVDDRIFFLGDFNYGRPGLVEGHADHKLQISLSTIKGKEV 956
Query: 952 PDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNI 1011
++VH + + Y PS+ VA L + PL+LS+ T S + + G R N+GLN+
Sbjct: 957 EFGRNIVHNAKNNSH-YTPSFAVAKMLGLHPLVLSKITSSFQV---SAVGQLRVNLGLNL 1012
Query: 1012 KFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDV 1071
KF K +V+G++RR + W ++ + + LI YM +FP F ++ + Y D
Sbjct: 1013 KFEGKKLKVLGYSRRADNG--WEFSNKAIELISTYMTKFPHFFAGIQRKPQGNEYEESD- 1069
Query: 1072 FPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTC---EKVEKQIT 1128
FP V +IV+WLK E P A +D+ V IE A ++ T
Sbjct: 1070 FPGAS---VKEIVAWLKTIESKNFEKVPLDAEQLDSDTVMAIEEAAQEALINGPQPQRTT 1126
Query: 1129 LFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYD 1188
L P + + C + KF L DRVV + D VP+ RGT++GI + T
Sbjct: 1127 LKAVPRGALLKPSDAEHRC--GNQKFALGDRVVYVADSGRVPIATRGTVVGISR--TPRT 1182
Query: 1189 AMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGN 1232
+ DV+FD F G + RCS RG +P +++NL+ + + G+
Sbjct: 1183 TLLDVLFDVTFMSGTTLGERCSPFRGSTVPIASVLNLTNKQLIAGS 1228
Score = 179 bits (455), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 105/129 (81%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + +D FR+TE+Q+
Sbjct: 1 MGVPKFFRWMSERYPSISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDDATFRMTEEQM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF+YIE L+ I+PK+LFFMA+DGVAPRAKMNQQR RRFR+A + E +KA +G+
Sbjct: 61 FIAIFNYIEHLYGKIKPKQLFFMAVDGVAPRAKMNQQRARRFRTALDVENAREKAIREGK 120
Query: 121 RLPTEKRFD 129
+P E+ FD
Sbjct: 121 EMPKEEAFD 129
>gi|45187827|ref|NP_984050.1| ADL046Cp [Ashbya gossypii ATCC 10895]
gi|44982611|gb|AAS51874.1| ADL046Cp [Ashbya gossypii ATCC 10895]
gi|374107264|gb|AEY96172.1| FADL046Cp [Ashbya gossypii FDAG1]
Length = 1474
Score = 590 bits (1522), Expect = e-165, Method: Compositional matrix adjust.
Identities = 423/1338 (31%), Positives = 655/1338 (48%), Gaps = 218/1338 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRY+SER+P +S+++ QI +FDNLYLDMN I+H +H N++D R++E+
Sbjct: 1 MGIPKFFRYVSERWPNISQLIDGTQISQFDNLYLDMNSILHTATHGNEDDIKKRLSEE-- 58
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
E+ R+ F+ ID +
Sbjct: 59 --------EVFARI-------FVYIDHL-------------------------------- 71
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
F T+K P++ +MAIDGVAPRAKMNQQR RRFRSA +AE +A+E+G
Sbjct: 72 ---------FHTIK---PQQTLYMAIDGVAPRAKMNQQRARRFRSAMDAETSLNRARERG 119
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
+ +P + FDSN ITPGT FM +L L+YF+ K+++D LW++ +ILSG
Sbjct: 120 DEIPEGEPFDSNSITPGTEFMHKLTTNLKYFIHEKVSSDSLWQNK---------NIILSG 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HE PGEGEHKIM YIR ++++ DYNPN RHC+YGLDADLIMLGL H+ + +LLREE+ +
Sbjct: 171 HEVPGEGEHKIMQYIRTLRAQQDYNPNTRHCIYGLDADLIMLGLSIHDTHVALLREEILY 230
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
E+ F+LLHL++MR+YLELEF ++ + L F F E ++DD++L+
Sbjct: 231 GRAQKPKAL-----EQQNFYLLHLAIMREYLELEFQEISDE--LEFKFDFERLLDDFILV 283
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F+IGNDF+PNLPDLH+ GA P+L + ++E L LDGYINE G +N RF +L L+
Sbjct: 284 MFVIGNDFLPNLPDLHLNKGAFPVLLQTFKETLKHLDGYINENGTINFARFSVWLDYLSK 343
Query: 421 FDFEQFREKYADIQY---------LEG-----KMGKKFSDVFHKEKSKEMDPDLAALIKA 466
F+ F D+ + LEG ++GKK K+ + P L + K
Sbjct: 344 FELMNFERDDIDVDWFNSQLENISLEGERKRKRIGKKLLLKQQKKIVGAVKPWL--MKKF 401
Query: 467 TDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFG-----QHKTDYYHYKLDY--- 518
++ D TEE + + E ++++ ++ F E G D Y +K+D
Sbjct: 402 SETLSPDVTEEEITMTPWLEKDLAEKNIDFLKEFALELGLIVVHSDSNDTYTFKIDLDSY 461
Query: 519 -------------AKVTNEVLRDQAECYI---------------RAIQWNLHYY------ 544
A++ + + + I R I+W YY
Sbjct: 462 SMNQSAEEHQTRVAELRRSIKKFEQAIIINDEEELEEAQEKYNERFIRWKDSYYKEKVGF 521
Query: 545 --------------YNGCVSWSWY------------YPHHYAPYISDIKDFSHLNLKYEM 578
Y + W Y Y +HYAP ISDI+ +N+ + +
Sbjct: 522 SIHDEDKLKEMANNYIEGLQWVLYYYYQGCPSWSWYYRYHYAPRISDIRKGLDVNISFSL 581
Query: 579 GEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVV 638
+PF PFQQL+AVLPA SKELLP Y+ LM + SPIL+ YP E D NGK DWEAVV
Sbjct: 582 DQPFKPFQQLMAVLPARSKELLPPVYRPLMYDDKSPILDLYPAEVELDKNGKTADWEAVV 641
Query: 639 LIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNV--NLGTALAPDYFPAINE 696
+ F+D+ +L+ AM ++ LLT EE+ RN G L++ ++ N+ + F I
Sbjct: 642 KLKFVDQDRLLAAMAPLDDLLTPEEKKRNIVGTDLIFVFNPQVDNVYKSPLKGVFTDIAN 701
Query: 697 NHAVEKPLYRDDIYVHPN----KLRKGLCQDVNLKL-YVTHFPTLKHVQFTHKIENAKVK 751
NH VE+ YVHP+ + GL + L + FPTLK + F ++ +
Sbjct: 702 NHCVERE------YVHPSMEGRSILYGLPEGAKLGTSALAGFPTLKSIPFNAQLAYNECT 755
Query: 752 VFQQPSRNESIII-VQDKVQVP--SLKQVADQILGKTIFINYPHLIEIRVQAVATKD--- 805
+F QPSR+ S+++ ++D Q S+ VA++ LG+ ++ N+P++ E ++ ++ +
Sbjct: 756 IFNQPSRHHSMLLTIKDVYQSSNLSVNDVAERYLGEIVYSNWPYIRESKMVSIIDNNYVY 815
Query: 806 -SRISFDKNSGPVFER--AAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVES 862
+ K+ G R A + + AF K+I GY K G+ + + PV
Sbjct: 816 IASEKCKKSGGTSVVRKPATPEEKKAFSSMVKNIIHGYSKKKGIVLPEVRAIARVLPVTG 875
Query: 863 RKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYK---TIDEIFYPGCQCFA 919
P G + Q+ F + Y Q V +++ E + IDE F G +
Sbjct: 876 --LIRQPDG--SYQKCFSKVEELYPLQLIVEDVENKDERYMERPPLPIDEEFPTGSRVIF 931
Query: 920 LSNPHYGSGGCVISTVKEENSFIKLSFKVQQ-----EPDLSDLVHLQDDTVYNYLPSYTV 974
L + YG +TV S +L V + EP++ D +Y PS+ V
Sbjct: 932 LGDYAYGGE----ATVDGYTSATRLKLTVNKQSTKAEPNIGKRRAEMDRKAVHYWPSFVV 987
Query: 975 ASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWF 1034
A +L + PL LSR T I E + N+GL +KF ++E+V+G+ R++ + W
Sbjct: 988 AKRLGLHPLFLSRITSRFLI----EVDNRSVNVGLMVKFPARDEKVLGYARKNRES--WE 1041
Query: 1035 YTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQ---RVAQIVSWLKEQP 1091
Y+ + L+ Y K FP+ F L + L+D + E+ +A I +++K+
Sbjct: 1042 YSNLTLQLVDQYRKNFPDFFNALMNVDKKIPKLKDLLSRRNAEEASAMLASITAFIKDAR 1101
Query: 1092 HAKAEVRPCGAAVVDAKVVSL---IEHAVDTCEKVEKQITLFVKPNKLYIPKPTLDKLCP 1148
+ V ++ A + ++ I D ++ EK+ V + P+ + L
Sbjct: 1102 QSFVIVPLESDSLTKASIQAVEKEIMRIADLPDQSEKRQLAKVPREAILDPRQSFALLRT 1161
Query: 1149 DPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--R 1206
+F L DRV+ ++D VPL +GT++G + V+FD+ G R
Sbjct: 1162 Q---RFDLGDRVIYVQDSGKVPLFSKGTVVGYTTIGSRISI--QVLFDQELAAGTTFGER 1216
Query: 1207 CSESRGYRMPAQAMINLS 1224
+RG + + ++N+S
Sbjct: 1217 LQTNRGIGVDSSCLLNIS 1234
>gi|321259283|ref|XP_003194362.1| 5'-3' exonuclease involved in mRNA decay; Kem1p [Cryptococcus gattii
WM276]
gi|317460833|gb|ADV22575.1| 5'-3' exonuclease involved in mRNA decay, putative; Kem1p
[Cryptococcus gattii WM276]
Length = 1456
Score = 583 bits (1504), Expect = e-163, Method: Compositional matrix adjust.
Identities = 403/1201 (33%), Positives = 614/1201 (51%), Gaps = 165/1201 (13%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+FFMAIDGVAPRAKMNQQR RRFR+ K+A +KA++ GE+LP EK FDSN ITPG
Sbjct: 79 PQKVFFMAIDGVAPRAKMNQQRSRRFRAGKDARDQREKAEKNGEKLPDEKAFDSNAITPG 138
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
TPFM RL Q L+Y+V+ +I+ D W+++ VILSGH+ PGEGEHKI ++IR
Sbjct: 139 TPFMARLSQHLKYYVRKRISEDA---------DWRNIRVILSGHDVPGEGEHKIQEFIRL 189
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K++PDYNPN RHCLYGLDADLIMLGL +H+P+F LLREEV F KS Q T
Sbjct: 190 NKAQPDYNPNTRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRKSR----QNTELANT 245
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
FFLLHLSLMR+YL+LEF L+ +SF + +E IIDD++LM +GNDF+P+LPDLHI
Sbjct: 246 NFFLLHLSLMREYLDLEFSSLQTQ--ISFEYDLERIIDDFILMAIFVGNDFLPHLPDLHI 303
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GAL ++ +Y+++LPT+DGY+NE G ++L R + L KLA F+ ++F + D +
Sbjct: 304 NEGALERIWGMYKDILPTIDGYLNEHGTISLPRLQLLLDKLAEFEVKRFEDDLVDQVHFS 363
Query: 438 G----------KMGKKFSDVFHKEKSKEMDPDLAALIK---------------------- 465
G K KK V K + K ++ L + I+
Sbjct: 364 GNHTKDTMVIEKARKKGRKVITKYQQKVLN-QLRSFIEKQQNQPNPTHRLELINTQDKRD 422
Query: 466 --------------ATDDDYDD-GTEEVLNYANYEEYYY------SDEDEEWRTNFFSEF 504
T D+ DD G ++ N E ++EDE+W ++ +
Sbjct: 423 NAFVQELADELHLHTTWDEVDDYGQSLIVCTFNMEGVSQDGSADGNEEDEDWESDGMEDE 482
Query: 505 GQHKTDYYH-----------YKLDYAKVTNEVLRDQAECYIRA-------IQWN------ 540
G+ Y D K +E L++ + R I +N
Sbjct: 483 GKLAVQRVFRNWSKAAVVDTYPEDVEKSMDEKLKEAMDGIKRQYYHDKLEINYNDPAQMQ 542
Query: 541 --LHYYYNG-----------CVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQ 587
+H+Y G SW W+Y +HY+P I+D+K + + +++ G+PF PFQQ
Sbjct: 543 DLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRITDLKGVADMKFEFDYGKPFTPFQQ 602
Query: 588 LLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVK 647
L+ VLP S E +P Y++LM E SPI+++YP F D+NGKKQDWEAVV IPFID+ +
Sbjct: 603 LMGVLPVDSMEHVPLAYRDLMYEETSPIIDFYPRNFELDMNGKKQDWEAVVKIPFIDQNR 662
Query: 648 LIKAMDAVEHLLTDEERSRNRHGPM---LVYTYSNVNLGTALAPDYFPAINENHA----V 700
L+KAM A + LT EER RN+ G + VY + P FP + +H
Sbjct: 663 LLKAMAARDVRLTPEERERNKSGVLSTEFVYDPEIDENYPSSFPGVFPELTRSHCRASPF 722
Query: 701 EKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRN 759
P+ DI +L GL + V L + + FP+L + ++ V VFQ S+N
Sbjct: 723 NLPVLGGDI-----QLIFGLVEGVQLGVSALAGFPSLNTLPHNGILDYHGVNVFQSESKN 777
Query: 760 ESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVF 818
S++I + K ++P ++A +LG+ F ++P+L E V AV+ + + + G
Sbjct: 778 PSMVITIIGKDELPKTSEIARNVLGQRTFHSWPYLQEGIVAAVSDDMFKYTL-QQVGKSL 836
Query: 819 ERAAKDMQDAFQLSKKS--ITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQ 876
QDA + +++ + Y + GV IG EVL++ +P++ K+ G + +
Sbjct: 837 RVVHMPHQDAVKWRRQADHVERHYSRRYGVIIGGVEVLLHIRPLKGLKHL--DNGALVKD 894
Query: 877 RTFIRSTVTYAYQSAVLNLQQARESLEYKTIDEI---FYPGCQCFALSNPHYGSGGCVIS 933
+ AYQ AV + E + ++ F G + L + HYG V S
Sbjct: 895 YEAPEKEIVQAYQMAVSQVTFEDERFLERAPPDLKVDFPVGERVLFLGDMHYGLAAQV-S 953
Query: 934 TVKEEN---SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTG 990
+ EE S I F+ + E + + PS + +L IS L LSR T
Sbjct: 954 AINEEAQTLSVILAYFEEETEETFKFTKAVAHRPTGKWWPSPILCRRLGISALALSRITS 1013
Query: 991 SIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQF 1050
++ + +G+K NIGL++KF + +V+G+++R++ + W ++E+ +++ Y K F
Sbjct: 1014 TLLV--QLNDGSKT-NIGLSLKFESRGLKVLGYSKRND--RGWEFSEKTAQVLEAYKKAF 1068
Query: 1051 PEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQ-IVSWLKEQPHAKAEVRPCGAAVVDAKV 1109
PEVF L++ D + ++ + V + + WLK++ + D +
Sbjct: 1069 PEVFKHLENRGGDLVKSKELCPAAEDPDAVIKGMKKWLKDE------------GLNDLES 1116
Query: 1110 VSLIEHAVD--TCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRD-- 1165
VSL ++ T + ++K+ V L P + +L F+ RVV ++D
Sbjct: 1117 VSLFADQLEAKTFQSIKKKRLDNVPRQTLLKPSQAIYRL---QGQVFEPGHRVVMVQDPA 1173
Query: 1166 CYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINL 1223
VP G RG ++G+ DV++D F G + +CS RG +P + +NL
Sbjct: 1174 AGGVPTGMRGVVVGLGM------RTIDVIWDNGFMGGSTLQGKCSPYRGSTVPFSSCLNL 1227
Query: 1224 S 1224
+
Sbjct: 1228 T 1228
Score = 189 bits (479), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/131 (66%), Positives = 106/131 (80%), Gaps = 2/131 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHP--NDNDPHFRITEK 58
MG+PKFFR+ISERYP S+++ IP FDNLYLDMNGIIHNCSHP ++NDPHFRITE+
Sbjct: 1 MGIPKFFRWISERYPLTSQLITPNSIPTFDNLYLDMNGIIHNCSHPPSSENDPHFRITEE 60
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
Q+ IF YI+ LF I+P+K+FFMAIDGVAPRAKMNQQR RRFR+ K+A +KA++
Sbjct: 61 QMILAIFAYIDHLFTKIKPQKVFFMAIDGVAPRAKMNQQRSRRFRAGKDARDQREKAEKN 120
Query: 119 GERLPTEKRFD 129
GE+LP EK FD
Sbjct: 121 GEKLPDEKAFD 131
>gi|401842124|gb|EJT44395.1| XRN1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1526
Score = 581 bits (1497), Expect = e-162, Method: Compositional matrix adjust.
Identities = 404/1210 (33%), Positives = 604/1210 (49%), Gaps = 161/1210 (13%)
Query: 130 FITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRF 189
F T+K P K+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA E G+ +P + F
Sbjct: 72 FQTIK---PNKIFYMAIDGVAPRAKMNQQRARRFRTAMDAEKAMKKAIENGDEIPKGEPF 128
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSN ITPGT FM +L + L+YF+ KI+ D W++V +I SGHE PGEGEH
Sbjct: 129 DSNSITPGTEFMAKLTKNLQYFIHDKISNDS---------KWREVQIIFSGHEVPGEGEH 179
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGS 309
KIM++IR++KS+ D+N N RHC+YGLDADLIMLGL TH P+F+LLREEV F ++++ S
Sbjct: 180 KIMNFIRHLKSQKDFNQNTRHCIYGLDADLIMLGLSTHGPHFALLREEVTFGRRNSEKKS 239
Query: 310 QIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFI 369
E F+LLHLSL+R+Y+ELEF ++ + + F + E I+DD++L+ F+IGNDF+
Sbjct: 240 L----EHQNFYLLHLSLLREYMELEFKEIADE--MRFEYDFERILDDFILVMFVIGNDFL 293
Query: 370 PNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLN----------LKRFEKFLTKLA 419
PNLPDLH+ GA P+L + ++E L DGYINE G +N L +FE +
Sbjct: 294 PNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLDYLSQFELLNFEKE 353
Query: 420 SFDFEQFREKYADI--------------------------------QYLEGKMGKKFSD- 446
D E F ++ +I + L+GK+ D
Sbjct: 354 DIDVEWFNKQLENISLDGERKRQRVGKKLLVKQQKKLIGSIKPWLMEQLQGKISPDLPDE 413
Query: 447 -------------VFHKEKSKEMDPDLAALIKATDD-------------DYDDGTEEVLN 480
H E KE DL I + + D+ EE N
Sbjct: 414 KIPTLELPRDLDIKDHLEFLKEFAFDLGLFITHSKSKNTYSLKLDLDSINPDETDEEFQN 473
Query: 481 YAN--------YEEYYYSDEDEEWRTN---FFSEFGQHKTDYYHYKLDYAKVTNEVLRDQ 529
N Y+ ++ EE T + F K +YY KL YA E + D
Sbjct: 474 RVNSTRKTIKKYQNAIIVEDKEELETEKTIYNERFEHWKHEYYRDKLKYASDCEERVTDL 533
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
++ Y+ +QW L+YYY GC SWSWYYPHHYAP ISD+ ++++++ +PF PFQQL+
Sbjct: 534 SKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLVKGLDQDIEFDLSKPFTPFQQLM 593
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
AVLP SK L+P ++ LM E SPI ++YP E D NGK DWEAVVLI F+DE +LI
Sbjct: 594 AVLPERSKNLIPPAFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVDEKRLI 653
Query: 650 KAMDAVEHLLTDEERSRNRHGPMLVYTYS---NVNLGTALAPDYFPAINENHAVEK---- 702
+AM L+ EE++RN+ G L+Y+++ +V + L F I NH VEK
Sbjct: 654 EAMQPYLSKLSPEEKTRNQFGKDLIYSFNPQVDVIYKSPLG-GIFSDIEHNHCVEKEYVT 712
Query: 703 -PLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNE 760
PL DI R GL + L + FPTL + FT+ +E + VFQQPSR +
Sbjct: 713 VPLDSSDI-------RYGLLPNAKLGAEMLAGFPTLLSLPFTNSLEYNETMVFQQPSRQQ 765
Query: 761 SIII-VQDKVQV--PSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPV 817
S+++ + D Q+ +L+ + + L K I+ +P L E ++ ++ + + +++
Sbjct: 766 SMVLQITDIYQMNNVTLEDFSKRHLNKVIYTRWPCLRESKLVSLTDGKTIYEYQESNDKK 825
Query: 818 ---FERAAKDMQDA--FQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGK 872
F D QD F + S+ Y + V +G PVE+ F G
Sbjct: 826 KTRFVSKPTDTQDKKLFNSLRNSMLRMYAKQKAVKLG---------PVEAIATVFPVTGL 876
Query: 873 VTQQ-----RTFIRSTVTYAYQSAVLNLQQARESLEYKT---IDEIFYPGCQCFALSNPH 924
V +TF + Y Q V ++ E + + I+E F + L +
Sbjct: 877 VRDHEGGYVKTFSSTPDYYPLQLVVESVVNEDERYKERGPIPIEEEFPLDSKVIFLGDYA 936
Query: 925 YGSGGCVISTVKEENSFIKLSFK-VQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPL 983
YG + + I + K + EP + D Y PSY V+ + + PL
Sbjct: 937 YGGETTIDGYSSDRRLKITVEKKLLDSEPTIGKERLQMDHQAVQYFPSYIVSKNMHLHPL 996
Query: 984 LLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLI 1043
LS+ T I D+T K N+G+ +KF ++++V+G+ RR+ + W Y+ + ++
Sbjct: 997 FLSKITSKFMITDAT---GKHINVGIPVKFEARHQKVLGYARRN--PRGWEYSNLTINVL 1051
Query: 1044 KNYMKQFPEVFGFLKDHSSDDIYLRDDVFPH----QGEQRVAQIVSWLKEQPHAKAEVRP 1099
K Y + FPE F L +DI + +D+FP+ + + + WLK V
Sbjct: 1052 KEYRQTFPEFFYRLS-KVGNDIPVLEDLFPNISTKEAMNSLDGVKQWLKYVSSKFIAVSL 1110
Query: 1100 CGAAVVDAKVVSLIEHAVDTCEKV---EKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKL 1156
++ + ++ EH + + E++ V + P+ + L KF L
Sbjct: 1111 ESDSLTKTSIAAVEEHIMKYAANIGGHERKQLAKVPRKAVLNPRSSFALLR---SQKFDL 1167
Query: 1157 FDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYR 1214
DRVV I+D VP+ +GT++G +S V+FD G R +RG
Sbjct: 1168 GDRVVYIQDSGKVPIFSKGTVVGYTTLSSSLSIQ--VLFDNEIVAGNDFGGRLRTNRGLG 1225
Query: 1215 MPAQAMINLS 1224
+ A ++N++
Sbjct: 1226 LDASFLLNIT 1235
Score = 171 bits (434), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 101/129 (78%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P + +++ QIPEFDNLYLDMN I+HNC+H ND+D R+TE+++
Sbjct: 1 MGIPKFFRYISERWPMILQLIEGTQIPEFDNLYLDMNSILHNCTHGNDDDVTKRLTEEEV 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F I YI+ LF+ I+P K+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA E G+
Sbjct: 61 FAKICTYIDHLFQTIKPNKIFYMAIDGVAPRAKMNQQRARRFRTAMDAEKAMKKAIENGD 120
Query: 121 RLPTEKRFD 129
+P + FD
Sbjct: 121 EIPKGEPFD 129
>gi|241950323|ref|XP_002417884.1| 5'-3' exoribonuclease, DNA strand transfer protein beta, putative
[Candida dubliniensis CD36]
gi|223641222|emb|CAX45602.1| 5'-3' exoribonuclease, DNA strand transfer protein beta, putative
[Candida dubliniensis CD36]
Length = 1487
Score = 574 bits (1479), Expect = e-160, Method: Compositional matrix adjust.
Identities = 404/1213 (33%), Positives = 612/1213 (50%), Gaps = 174/1213 (14%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K F+MAIDGVAPRAKMNQQR RRFR+A EAE+ +KA E GE +P E FDSN ITPG
Sbjct: 41 PQKTFYMAIDGVAPRAKMNQQRARRFRTAYEAEINLKKAIENGEEIPKEDPFDSNSITPG 100
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L L+YF+ KIT D W ++ ++LSGHE PGEGEHKIM+YIR
Sbjct: 101 TEFMAKLTNNLKYFIHKKITEDS---------SWANIEIVLSGHEVPGEGEHKIMEYIRS 151
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
++S+ DYNPN+RHC+YGLDADLIMLGL TH+P+F+LLREEV F + G + +
Sbjct: 152 IRSQDDYNPNLRHCIYGLDADLIMLGLVTHDPHFALLREEVTFGPQRKIGPKDL---HDQ 208
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
KF+LLHLSL+R+YL LEF +++ L+F + + I+DD++L+ ++IGNDF+PNLPDL I
Sbjct: 209 KFYLLHLSLLREYLSLEFQEIENQ--LNFEYDFDKILDDFILIMYVIGNDFLPNLPDLFI 266
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GA PLL +++ L DGYINE G +NL R ++ L+ F+FE F + D+++
Sbjct: 267 NKGAFPLLIAAFKQTLLDSDGYINENGKINLVRLNIYIKFLSKFEFENFEKYEVDVEWFN 326
Query: 438 GKM------GKKFSDVFHKEKSKEMDPDLAALIKATDDDY-DDGTEEVLNY---ANYEEY 487
K+ G+K K + L IK ++ E+LN
Sbjct: 327 KKLDDISISGEKKRQRIGKLLILKEQKKLVGFIKPWLMEWASQSINEILNLDQQGKLPTL 386
Query: 488 YYSDEDEEWRTNFFSEFG--------QHKT-DYYHYKLDYAKVT---------------- 522
+ + ED E +F EF H+T D Y KLD ++
Sbjct: 387 HLNKEDVEKNLDFIKEFAIEAGFLIIHHQTNDIYEAKLDIDGISPNETEEEHEERITELR 446
Query: 523 --------------NEVLRDQAECYIRAIQ-W-------NLH------------------ 542
EVL + + Y Q W LH
Sbjct: 447 KTIKQYQSANLIENEEVLNETKQVYSEKFQSWKNDYYQSKLHFSIDTEEGKNKLIELTKH 506
Query: 543 ----------YYYNGCVSWSWYYPHHYAPYISDIK------DFSHLNLKYEMGEPFLPFQ 586
YYY GC SW+WYY +HYAP ISDI + L +E+ PF PF+
Sbjct: 507 YIEGLQWVLYYYYRGCPSWNWYYKYHYAPRISDISLGLEELINEKIELNFELSHPFKPFE 566
Query: 587 QLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEV 646
QL+AVLPA SK+L+P Y+ LMT E SPI+ +YP E D+NGK WEAVVL+ F+DE
Sbjct: 567 QLMAVLPARSKKLMPVVYRPLMTDEKSPIINFYPHEVEIDMNGKTASWEAVVLLDFVDEK 626
Query: 647 KLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNV--NLGTALAPDYFPAINENHAVEKPL 704
KLI+A+ +E LT EE+ RN +G + + ++ ++ ++ P +F I + E+
Sbjct: 627 KLIEALKPIESKLTFEEKQRNSYGHAIKFIHNPQIDHVFSSPLPGFFHDIEHDQCYEEEF 686
Query: 705 YRDDIYVHPNKLRKGLCQDVNL-KLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESII 763
I L+ G + K + FPTL + FT ++ +VK+F PSR+ES+I
Sbjct: 687 KLPKI----ENLKIGFIEGAKTGKDLLAGFPTLSTIPFTFELALNEVKIFNFPSRSESMI 742
Query: 764 IVQDKVQVP-SLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAA 822
+ + V ++ Q A + K ++ +P L E RV V +++++ K S + +
Sbjct: 743 LNIENVWCDLTITQFAQSFINKLVYSKWPFLRECRVVKVLSEENKFESIKTSTGLKKIVT 802
Query: 823 KD--MQD--AFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRT 878
+ M+D +F+ ++ + GV +G LVY +PV K +T
Sbjct: 803 NELTMEDKKSFRSEISNLKVIWDKFKGVKLGEINALVYVKPVNG----LIRNHKGAYVKT 858
Query: 879 FIRSTVTYAYQSAVLNLQQARESLEYK---TIDEIFYPGCQCFALSNPHYGSGGCVISTV 935
+ + Y Q V + + + ID+ F Q L + YGS ++
Sbjct: 859 YSKDIEVYPLQLIVKEVTNKDQRFLTRPPLPIDQEFPIDSQVVFLGDMAYGSPAKIVGYN 918
Query: 936 KEENSFIKLSFKVQQ--EPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIF 993
+++ FK+Q EP++ + Y PS+ V+ L ++PLLLS+ T S F
Sbjct: 919 EDKTKLSVKIFKIQSLAEPNVGKKRLNIEKNEIKYYPSFEVSKTLRLNPLLLSKIT-SQF 977
Query: 994 IIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEV 1053
+I +G + NIGL +KF K ++V+G+TR+ K W ++ + LI NY +FPE+
Sbjct: 978 MIQDFSKG--KINIGLELKFESKRQKVLGYTRKSNNGKFWEFSPLAINLINNYKTKFPEL 1035
Query: 1054 FGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
F L ++ S + D + E + +I SWLKE K E+ P VSL
Sbjct: 1036 FKKLANNISGSNFPTVDEISNPEE--LKEIRSWLKE---VKNELIP----------VSLE 1080
Query: 1114 EHAVD--TCEKVEKQITLFVKPNKLYIPKPTLDKLCPD----------------PDTKFK 1155
+ + + +E+ + ++ N++ PT++K D +F+
Sbjct: 1081 SESFTKFSYQAIEQYMDNYLSMNQI----PTINKDIKGVPREAILNANESYQLLSDQRFE 1136
Query: 1156 LFDRVVNIRDCYTVPLGYRGTIIGI--VQGETSYDAMYDVVFDKPFPHGVKI--RCSESR 1211
L DR++ ++D VP+ +GT+ I V +TS V+FD+P G + + + +R
Sbjct: 1137 LGDRIIYVQDFGKVPILSKGTVASILTVGSKTS----LGVIFDQPLLSGNNMNGKLNSNR 1192
Query: 1212 GYRMPAQAMINLS 1224
G + + ++NL+
Sbjct: 1193 GLIIDSSLVLNLT 1205
Score = 117 bits (292), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MN I+H C+H NDN R+++ Q++ IF+YIE LF++I+P+K F+MAIDGVAPRAKMN
Sbjct: 1 MNSILHTCTHSNDNTIT-RLSDDQMYAAIFNYIEHLFQIIKPQKTFYMAIDGVAPRAKMN 59
Query: 96 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
QQR RRFR+A EAE+ +KA E GE +P E FD
Sbjct: 60 QQRARRFRTAYEAEINLKKAIENGEEIPKEDPFD 93
>gi|341892378|gb|EGT48313.1| CBN-XRN-1 protein [Caenorhabditis brenneri]
Length = 1684
Score = 571 bits (1472), Expect = e-159, Method: Compositional matrix adjust.
Identities = 384/1153 (33%), Positives = 581/1153 (50%), Gaps = 173/1153 (15%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+FFMA+DGVAPRAKMNQQR RRF SA+ A+ KA EKGE +PTEKRFDSNCITPG
Sbjct: 77 PQKVFFMAVDGVAPRAKMNQQRARRFMSARTAQTQLDKAIEKGEVIPTEKRFDSNCITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RLH QL ++K K +D W+ +ILSGH PGEGEHKIMDYIR
Sbjct: 137 TYFMTRLHDQLDEWIKKKSESDSHWQGRK---------IILSGHNVPGEGEHKIMDYIRT 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
++K DY+PN RHC+YGLDADLIMLG+ +HEP+FSLLREEV FNT+ K + P+ T
Sbjct: 188 ERAKSDYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLREEVTFNTRPRKNEQKNKKPKRT 247
Query: 318 K-----FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
F LLHLSL+R+YL EF +KE L F + +E ++DDW++MG L+GNDF+P+L
Sbjct: 248 DSDVKTFHLLHLSLLREYLAWEFADVKE--SLPFAYDMERVVDDWIMMGLLVGNDFLPHL 305
Query: 373 PDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
P +HI + ALPLLY Y++VLPTLDGYINE GYLNL RFEKFL +LA D F +K D
Sbjct: 306 PSIHIHDDALPLLYSTYKKVLPTLDGYINESGYLNLARFEKFLAQLALNDKNSFMDKLED 365
Query: 433 IQYLEGKMGKKFSDVFHKEKSKEMDPDLAAL------------IKATDDDYDDGTEEVLN 480
Q++ K + S + + +L K TD+ +G ++
Sbjct: 366 EQFMASKRLPRTSQPGDSSEEASGEEELVPFNSSDIEDNDEDDEKGTDESDGNGDDD--- 422
Query: 481 YANYEEYYYSDEDEEWRTNFFS-----------------EFGQHKTDYYHYKLDYAKVTN 523
E + SD +EE S EF +D A N
Sbjct: 423 ----EAAFVSDHEEEDEVEGKSSGEELSPSNLDALLLEEEFNDELATLALSGMDDADFAN 478
Query: 524 EVLRDQAECYIRAI--QWNLH---YY--------------------YNGCVSWSWYY--- 555
V C+ + + Q+ H YY Y + W+ +Y
Sbjct: 479 NV----EACWTKTLDNQFKRHKKSYYADKLRYKNISKSELRAQAEGYVRAIQWNLHYYYH 534
Query: 556 ---------PHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQN 606
PHHYAP+ISD++ F+ + +++E+ +PF PF+QLLAVLP AS + LP P Q
Sbjct: 535 GCVSWSWFYPHHYAPFISDVQGFADMKIEFELSKPFHPFEQLLAVLPEASADCLPRPLQE 594
Query: 607 LMTLE--NSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEER 664
LM+ + S I ++YP +F TDLNGK+ DWEAVVLIPFI E +L++A+++ LT+EE
Sbjct: 595 LMSSDPAKSVIYDFYPSKFETDLNGKRNDWEAVVLIPFIAENRLLEAIESKRSRLTNEEN 654
Query: 665 SRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDV 724
RN HG + SN + A N+ L ++ + +++ GL +V
Sbjct: 655 MRNTHG-CHIQVVSNKS-----------ADNKWTVTRTELPQEIFRIPKEQVKWGLLPNV 702
Query: 725 NLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQV-PSLKQVADQIL 782
+ +Y FPT+KH+ T ++ A +F SR ES+++ V++ + + + ++
Sbjct: 703 KMDVYFPGFPTMKHLNHTGELRFANCNIFGMSSRKESMVLKVENDSNIEKDIIEWGSELC 762
Query: 783 GKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSI------ 836
+ + I++P L +V + D +I + + KDM + + K+ I
Sbjct: 763 DEEVCIDWPILKLAKVDCIWGGDDKIVRKIDGDEII---VKDMSE--EEKKQWIAHVNQQ 817
Query: 837 TDGYYTKLGVDIGNTE------------------VLVYGQPVESRKYFFGPRGKVTQQRT 878
T+ T+ ++ + LVY E+ K P K +Q +
Sbjct: 818 TERQMTRFAIECAGQKDAKGKHIRPPIVWVRKFTGLVYESHQENGK---APILKAVKQWS 874
Query: 879 FIRSTVTYAYQSAVLN--LQQARESLEYKTIDEIFYPGCQCFALSNPH---YGSGGCVIS 933
+ST V + L+ +R + + YP +++P YG G +
Sbjct: 875 SPQSTFPVLLPLVVKDVLLENSRNLADLPV--RLAYPLRAIVWMNDPSTALYGMPGMIDG 932
Query: 934 TVKEENSFIKLS-FKVQQEPDLSDLVHLQ---DDTVYNYLPSYTVASKLSISPLLLSRFT 989
E +S ++ + Q+ ++ + L+ + ++ Y A + + P L +R T
Sbjct: 933 YQNENSSNCRIQVVGMSQDNRIAQMEELRKKAEQKSLRWMGGYDWARQCHVDPRLFARIT 992
Query: 990 GSIFIIDSTEEGAKRH---------NIGLNIKFSRKNEEVVGFTRRDE------TTKKWF 1034
G++F+ + E ++ N GL++KFS+++ + +T R E T K W
Sbjct: 993 GTMFMWNEPRERVEKGQQLSSESKINCGLSLKFSKRDFCIADYTDRVEQTNAKGTMKVWL 1052
Query: 1035 YTEQVVTLIKNYMKQFPEVFGFLKDHSS---DDIYLRDDVFPHQGE--QRVAQIVSWLKE 1089
Y+ L+ Y FPEVF +L+ S DD+Y ++++ + E +R ++ +L
Sbjct: 1053 YSNLTCVLVNEYKNAFPEVFKYLESAGSTQMDDVYYAEEIWKDERERSKRFGELKDFLSN 1112
Query: 1090 QPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQI-TLFVKPNKLYIPKPTLDKLCP 1148
P +AE CG D +++ IE A+ E V + + F P+ ++ + K+
Sbjct: 1113 LPSQEAEQLKCGTEYADRRMIEAIEKALKEKEVVPRIMHRYFPTPSGVFRYELYNGKVNV 1172
Query: 1149 DPDTKFKLFDRVV 1161
DP+ F + DRV
Sbjct: 1173 DPEADFLILDRVA 1185
Score = 210 bits (534), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 115/144 (79%), Gaps = 4/144 (2%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ SERYPCLSEV+ E QIPEFDNLYLDMNGIIHNCSHPND+D FRITE++I
Sbjct: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEEEI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F +IF YIE L+ +I+P+K+FFMA+DGVAPRAKMNQQR RRF SA+ A+ KA EKGE
Sbjct: 61 FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFMSARTAQTQLDKAIEKGE 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFM 144
+PTEKRFD C +FM
Sbjct: 121 VIPTEKRFD----SNCITPGTYFM 140
>gi|198417497|ref|XP_002120271.1| PREDICTED: similar to 5-3 exoribonuclease 1 [Ciona intestinalis]
Length = 665
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 323/641 (50%), Positives = 410/641 (63%), Gaps = 72/641 (11%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT 185
F++I + F P++ FFMA+DGVAPRAKMNQQRGRRFRSAKEAE ++A +KGE LPT
Sbjct: 65 FNYIEVLFRIIRPQRTFFMAVDGVAPRAKMNQQRGRRFRSAKEAENNIKQALQKGEVLPT 124
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPG 245
EKRFDSNCITPGT FM +L QL YFV+ KITTD W+ + V LSGH+TPG
Sbjct: 125 EKRFDSNCITPGTSFMEKLQAQLEYFVQNKITTDP---------SWQGIKVYLSGHQTPG 175
Query: 246 EGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN 305
EGEHKIM++IRY +S+P+Y+PN RHCLYGLDADL+MLGLCTHEP+F+LLREEVKF +
Sbjct: 176 EGEHKIMEFIRYERSQPEYDPNTRHCLYGLDADLLMLGLCTHEPHFALLREEVKF---TR 232
Query: 306 KGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIG 365
+ S+ +T F LLH+SL+R+Y+E EF E L F F+IE+IIDDWVLMGFL+G
Sbjct: 233 QKSSKTQNAAQTTFHLLHISLLREYIEHEF----EAPNLPFEFNIESIIDDWVLMGFLVG 288
Query: 366 NDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQ 425
NDFIP+LPDLHI ALP LY+ Y +VLPTL GY+NEGG +NL R E +L ++SFD +
Sbjct: 289 NDFIPHLPDLHISTSALPFLYQTYIQVLPTLGGYLNEGGVINLGRLEVYLKAISSFDMDH 348
Query: 426 FREKYADIQYLEGKM-GKKFSDVF------HKEKSKEMDPDLAALIKATDDDYDDGTEEV 478
F E Y+D ++LE K KK +D ++KS ++ DLA IK + TE V
Sbjct: 349 FEEVYSDYKWLEAKSKSKKPTDCLLVGGEVTEDKSLKIVKDLA--IKQGT---IEATETV 403
Query: 479 LNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQ 538
DEE + F EF HK YY K + +E+ E YI IQ
Sbjct: 404 --------------DEE-HSTFDQEFKLHKRAYYQTKFNIEGTEDEISTIAYE-YILGIQ 447
Query: 539 WNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKE 598
W HYYYNG SW W+YP+HY+PY+SD+ + S L+L Y M +PFLPFQQLLAVLPAASK+
Sbjct: 448 WICHYYYNGVQSWDWFYPYHYSPYMSDLCNISTLHLTYNMNQPFLPFQQLLAVLPAASKD 507
Query: 599 LLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEV------------ 646
+PEPY NLM E+S I ++YP F+TDLNGK+Q+WEAVV IPFI+EV
Sbjct: 508 CIPEPYWNLMD-ESSIIGDFYPSNFSTDLNGKQQEWEAVVQIPFIEEVTTNNSGCGVMEE 566
Query: 647 KLIKAMDAVEHLLTDEERSRNRHGPMLVYTY--SNVNLGTALAPDYFPAINENHAVEKPL 704
+L+ AM++ L+ ++ RN HGP +Y+Y + + + FP N V K
Sbjct: 567 RLLSAMESCNSRLSASDKRRNTHGPCQLYSYDPNTPHYVKSSLHGIFP--NLEACVAK-- 622
Query: 705 YRDD------IYVHPNKLRKGLCQDVNLKLYVTHFPTLKHV 739
R+D IY KGL L Y FPTL H+
Sbjct: 623 -REDIPPTQWIYDDYRDFTKGLLPGCRLSTYYQGFPTLYHL 662
Score = 237 bits (605), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 106/129 (82%), Positives = 123/129 (95%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+EYQ+PEFDNLYLDMNGIIHNCSHPND+DPHFRITE+QI
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEYQVPEFDNLYLDMNGIIHNCSHPNDDDPHFRITEEQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F+DIF+YIE+LFR+I+P++ FFMA+DGVAPRAKMNQQRGRRFRSAKEAE ++A +KGE
Sbjct: 61 FKDIFNYIEVLFRIIRPQRTFFMAVDGVAPRAKMNQQRGRRFRSAKEAENNIKQALQKGE 120
Query: 121 RLPTEKRFD 129
LPTEKRFD
Sbjct: 121 VLPTEKRFD 129
>gi|238878282|gb|EEQ41920.1| 5'-3' exoribonuclease 1 [Candida albicans WO-1]
Length = 1422
Score = 567 bits (1461), Expect = e-158, Method: Compositional matrix adjust.
Identities = 398/1207 (32%), Positives = 600/1207 (49%), Gaps = 174/1207 (14%)
Query: 144 MAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCR 203
MAIDGVAPRAKMNQQR RRFR+A EAE+ +KA E GE +P E FDSN ITPGT FM +
Sbjct: 1 MAIDGVAPRAKMNQQRARRFRTAYEAEINLKKAIENGEEIPKEDPFDSNSITPGTEFMAK 60
Query: 204 LHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPD 263
L L+YF+ KIT D W ++ +ILSGHE PGEGEHKIM+YIR ++S+ D
Sbjct: 61 LTNNLKYFIHKKITEDS---------SWANIEIILSGHEVPGEGEHKIMEYIRSIRSQDD 111
Query: 264 YNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLH 323
YNPN+RHC+YGLDADLIMLGL TH+P+F+LLREEV F + G + + KF+LLH
Sbjct: 112 YNPNLRHCIYGLDADLIMLGLVTHDPHFALLREEVTFGPQRKVGPKDL---HDQKFYLLH 168
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
LSL+R+YL LEF +++ L+F + + I+DD++L+ ++IGNDF+PNLPDL I GA P
Sbjct: 169 LSLLREYLSLEFQEIENQ--LNFEYDFDRILDDFILIMYVIGNDFLPNLPDLFINKGAFP 226
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKM--- 440
LL +++ L DGYINE G +NL R ++ L+ F+FE F + D+++ K+
Sbjct: 227 LLIAAFKQTLLESDGYINENGKINLVRLNIYIKILSKFEFENFEKHEVDVEWFNKKLDDI 286
Query: 441 ---GKKFSDVFHKEKSKEMDPDLAALIKATDDDY-DDGTEEVLNY---ANYEEYYYSDED 493
G+K K + L IK ++ E+LN + + +D
Sbjct: 287 SISGEKKRQRIGKLLILKEQKKLVGFIKPWLMEWASQPINEILNLDQQGKLPTLHLNKDD 346
Query: 494 EEWRTNFFSEFG---------QHKTDYYHYKLDYAKV----------------------- 521
E F EF D Y KLD +
Sbjct: 347 VEKNLEFIKEFAIEAGFLIIHSQSNDTYEAKLDIDGISPTESEEEHEERITELRKTIKQY 406
Query: 522 -------TNEVLRDQAECYIRAIQ-WNLHYY----------------------------- 544
+ EVL + E Y Q W YY
Sbjct: 407 QSANLIESEEVLNETKEVYSEKFQSWKNDYYQSKLHFSIDTEEGKGDLIEMTKHYIEGLQ 466
Query: 545 ------YNGCVSWSWYYPHHYAPYISDIK-DFSHL-----NLKYEMGEPFLPFQQLLAVL 592
Y GC SW+WYY +HYAP ISDI L +LK+E+ PF PF+QL+AVL
Sbjct: 467 WVLYYYYRGCPSWNWYYRYHYAPRISDISLGLEELINEKTDLKFELSHPFKPFEQLMAVL 526
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAM 652
PA SK+L+P Y+ LM+ E SPI+ +YP E D+NGK WEAVVL+ F+DE KLI+A+
Sbjct: 527 PARSKKLMPVVYRPLMSDEKSPIINFYPHEVDIDMNGKTASWEAVVLLDFVDEKKLIEAL 586
Query: 653 DAVEHLLTDEERSRNRHGPMLVYTYSNV--NLGTALAPDYFPAINENHAVEKPLYRDDIY 710
+E LT EE+ RN +G + + ++ ++ ++ P +F I + E+ I
Sbjct: 587 KPIESKLTPEEKQRNSYGHAIKFIHNPQIDHVFSSPLPGFFHDIEHDQCYEEEFKLPKI- 645
Query: 711 VHPNKLRKGLCQDVNL-KLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDK 768
L+ G + K + FPTL + FT ++ +VK+F PSR+ES+I+ V+D
Sbjct: 646 ---ENLKIGFIKGAKTGKDLLAGFPTLSTIPFTSELALNEVKIFNFPSRSESMILNVEDV 702
Query: 769 VQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRI-SFDKNSG---PVFERAAKD 824
++ Q A + K ++ +P L E RV V +++ + S N+G V + +
Sbjct: 703 WSDLTVAQFAQSFVNKLVYSKWPFLRECRVVKVVSEEHKFESIKTNTGLKKVVTNELSVE 762
Query: 825 MQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTV 884
+ +F+ ++ + GV +G LVY +PV K +T+ +
Sbjct: 763 DKKSFRSEVSNLKVTWDKFKGVKLGEINALVYVKPVNG----LIRNHKGAYVKTYSKDVE 818
Query: 885 TYAYQ---SAVLNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSF 941
Y Q V N Q + ID+ F Q L + YGS ++ +++
Sbjct: 819 VYPLQLIVKEVTNKDQRYLTRPPLPIDQEFPIDSQVVFLGDMAYGSPAKIVGYNEDKTKL 878
Query: 942 IKLSFKVQQ--EPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
FK+Q EP++ + Y PS+ VA L ++PLLLS+ T + DS++
Sbjct: 879 GVKIFKIQSTAEPNIGKKRLTIEKNEIKYYPSFEVAKTLRLNPLLLSKITSQFMVQDSSK 938
Query: 1000 EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKD 1059
+ NIGL +KF K ++V+G+TR+ K W ++ + LI Y +FP +F L +
Sbjct: 939 ---GKVNIGLELKFESKRQKVLGYTRKSSNGKFWEFSPLAINLINTYKTKFPGLFKKLVN 995
Query: 1060 HSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD- 1118
+ S + D + + +I SWLKE K+E+ P VSL +
Sbjct: 996 NVSGSNFPTVDEI--SSPEELKEIRSWLKE---VKSELIP----------VSLESESFTK 1040
Query: 1119 -TCEKVEKQITLFVKPNKLYIPKPTLDKLCPD----------------PDTKFKLFDRVV 1161
+ + +E+ + ++ N++ PT++K D +F+L DR++
Sbjct: 1041 FSYQAIEQYMDNYLSMNQI----PTINKDIKGVPREAILNANESYQLLSDQRFELGDRII 1096
Query: 1162 NIRDCYTVPLGYRGTIIGI--VQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPA 1217
++D VP+ +GT+ I V +TS V+FD+P G + + + +RG + +
Sbjct: 1097 YVQDFGKVPILSKGTVASILTVGSKTS----LGVIFDQPLLSGNNMNGKLNSNRGLIIDS 1152
Query: 1218 QAMINLS 1224
++NL+
Sbjct: 1153 SLVLNLT 1159
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 37/47 (78%)
Query: 83 MAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
MAIDGVAPRAKMNQQR RRFR+A EAE+ +KA E GE +P E FD
Sbjct: 1 MAIDGVAPRAKMNQQRARRFRTAYEAEINLKKAIENGEEIPKEDPFD 47
>gi|68467492|ref|XP_722179.1| hypothetical protein CaO19.4969 [Candida albicans SC5314]
gi|46444129|gb|EAL03406.1| hypothetical protein CaO19.4969 [Candida albicans SC5314]
Length = 1422
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 398/1207 (32%), Positives = 599/1207 (49%), Gaps = 174/1207 (14%)
Query: 144 MAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCR 203
MAIDGVAPRAKMNQQR RRFR+A EAE+ +KA E GE +P E FDSN ITPGT FM
Sbjct: 1 MAIDGVAPRAKMNQQRARRFRTAYEAEINLKKAIENGEEIPKEDPFDSNSITPGTEFMAN 60
Query: 204 LHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPD 263
L L+YF+ KIT D W ++ +ILSGHE PGEGEHKIM+YIR ++S+ D
Sbjct: 61 LTNNLKYFIHKKITEDS---------SWANIEIILSGHEVPGEGEHKIMEYIRSIRSQDD 111
Query: 264 YNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLH 323
YNPN+RHC+YGLDADLIMLGL TH+P+F+LLREEV F + G + + KF+LLH
Sbjct: 112 YNPNLRHCIYGLDADLIMLGLVTHDPHFALLREEVTFGPQRKVGPKDL---HDQKFYLLH 168
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
LSL+R+YL LEF +++ L+F + + I+DD++L+ ++IGNDF+PNLPDL I GA P
Sbjct: 169 LSLLREYLSLEFQEIENQ--LNFEYDFDRILDDFILIMYVIGNDFLPNLPDLFINKGAFP 226
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKM--- 440
LL +++ L DGYINE G +NL R ++ L+ F+FE F + D+++ K+
Sbjct: 227 LLIAAFKQTLLESDGYINENGKINLVRLNIYIKILSKFEFENFEKHEVDVEWFNKKLDDI 286
Query: 441 ---GKKFSDVFHKEKSKEMDPDLAALIKATDDDY-DDGTEEVLNY---ANYEEYYYSDED 493
G+K K + L IK ++ E+LN + + +D
Sbjct: 287 SISGEKKRQRIGKLLILKEQKKLVGFIKPWLMEWASQPINEILNLDQQGKLPTLHLNKDD 346
Query: 494 EEWRTNFFSEFG---------QHKTDYYHYKLDYAKV----------------------- 521
E F EF D Y KLD +
Sbjct: 347 VEKNLEFIKEFAIEAGFLIIHSQSNDTYEAKLDIDGISPTESEEEHEERITELRKTIKQY 406
Query: 522 -------TNEVLRDQAECYIRAIQ-WNLHYY----------------------------- 544
+ EVL + E Y Q W YY
Sbjct: 407 QSANLIESEEVLNETKEVYSEKFQSWKNDYYQPKLHFSIDTEEGKGDLIEMTKHYIEGLQ 466
Query: 545 ------YNGCVSWSWYYPHHYAPYISDIK-DFSHL-----NLKYEMGEPFLPFQQLLAVL 592
Y GC SW+WYY +HYAP ISDI L +LK+E+ PF PF+QL+AVL
Sbjct: 467 WVLYYYYRGCPSWNWYYRYHYAPRISDISLGLEELINEKTDLKFELSHPFKPFEQLMAVL 526
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAM 652
PA SK+L+P Y+ LM+ E SPI+ +YP E D+NGK WEAVVL+ F+DE KLI+A+
Sbjct: 527 PARSKKLMPVVYRPLMSDEKSPIINFYPHEVDIDMNGKTASWEAVVLLDFVDEKKLIEAL 586
Query: 653 DAVEHLLTDEERSRNRHGPMLVYTYSNV--NLGTALAPDYFPAINENHAVEKPLYRDDIY 710
+E LT EE+ RN +G + + ++ ++ ++ P +F I + E+ I
Sbjct: 587 KPIESKLTPEEKQRNSYGHAIKFIHNPQIDHVFSSPLPGFFHDIEHDQCYEEEFKLPKI- 645
Query: 711 VHPNKLRKGLCQDVNL-KLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDK 768
L+ G + K + FPTL + FT ++ +VK+F PSR+ES+I+ V+D
Sbjct: 646 ---ENLKIGFIKGAKTGKDLLAGFPTLSTIPFTSELALNEVKIFNFPSRSESMILNVEDV 702
Query: 769 VQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRI-SFDKNSG---PVFERAAKD 824
++ Q A + K ++ +P L E RV V +++++ S N+G V + +
Sbjct: 703 WSDLTVAQFAQSFVNKLVYSKWPFLRECRVVKVVSEENKFESIKTNTGLKKVVTNELSVE 762
Query: 825 MQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTV 884
+ +F+ ++ + GV +G LVY +PV K +T+ +
Sbjct: 763 DKKSFRSEVSNLKVTWDKFKGVKLGEINALVYVKPVNG----LIRNHKGAYVKTYSKDVE 818
Query: 885 TYAYQ---SAVLNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSF 941
Y Q V N Q + ID+ F Q L + YGS ++ +++
Sbjct: 819 VYPLQLIVKEVTNKDQRYLTRPPLPIDQEFPIDSQVVFLGDMAYGSPAKIVGYNEDKTKL 878
Query: 942 IKLSFKVQQ--EPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
FK+Q EP++ + Y PS+ VA L ++PLLLS+ T + DS++
Sbjct: 879 GVKIFKIQSTAEPNIGKKRLTIEKNEIKYYPSFEVAKTLRLNPLLLSKITSQFMVQDSSK 938
Query: 1000 EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKD 1059
+ NIGL +KF K ++V+G+TR+ K W ++ + LI Y +FP +F L +
Sbjct: 939 ---GKVNIGLELKFESKRQKVLGYTRKSSNGKFWEFSPLAINLINTYKTKFPGLFKKLVN 995
Query: 1060 HSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD- 1118
+ S + D E + +I SWLKE K+E+ P VSL +
Sbjct: 996 NVSGSNFPTVDEISSLEE--LKEIRSWLKE---VKSELIP----------VSLESESFTK 1040
Query: 1119 -TCEKVEKQITLFVKPNKLYIPKPTLDKLCPD----------------PDTKFKLFDRVV 1161
+ + +E+ + ++ N++ PT++K D +F+L DR++
Sbjct: 1041 FSYQAIEQYMDNYLSMNQI----PTINKDIKGVPREAILNANESYQLLSDQRFELGDRII 1096
Query: 1162 NIRDCYTVPLGYRGTIIGI--VQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPA 1217
++D V + +GT+ I V +TS V+FD+P G + + + +RG + +
Sbjct: 1097 YVQDFGKVSILSKGTVASILTVGSKTS----LGVIFDQPLLSGNNMNGKLNSNRGLIIDS 1152
Query: 1218 QAMINLS 1224
++NL+
Sbjct: 1153 SLVLNLT 1159
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 37/47 (78%)
Query: 83 MAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
MAIDGVAPRAKMNQQR RRFR+A EAE+ +KA E GE +P E FD
Sbjct: 1 MAIDGVAPRAKMNQQRARRFRTAYEAEINLKKAIENGEEIPKEDPFD 47
>gi|255728793|ref|XP_002549322.1| 5'-3' exoribonuclease 1 [Candida tropicalis MYA-3404]
gi|240133638|gb|EER33194.1| 5'-3' exoribonuclease 1 [Candida tropicalis MYA-3404]
Length = 1513
Score = 558 bits (1437), Expect = e-155, Method: Compositional matrix adjust.
Identities = 409/1221 (33%), Positives = 599/1221 (49%), Gaps = 195/1221 (15%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKK F+MAIDGVAPRAKMNQQR RRFR+A EAE +KA GE +P E FDSN ITPG
Sbjct: 76 PKKTFYMAIDGVAPRAKMNQQRARRFRTAYEAEENLKKAIANGEVIPKEDPFDSNSITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L L+YF+ KIT D W ++ +ILSGHE PGEGEHKIM+YIR
Sbjct: 136 TEFMSKLTVNLKYFIHKKITEDS---------NWANIDIILSGHEVPGEGEHKIMEYIRA 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
++S+P+YNPN+RHC+YGLDADLIML L TH+P+F+LLREEV F G + ++ +
Sbjct: 187 IRSQPEYNPNLRHCIYGLDADLIMLSLVTHDPHFALLREEVTFGPSKKSLGDKDLS--DQ 244
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
KFFLLH+SL+R+YL LEF L+ L+F ++ E I+DD++L+ ++IGNDF+PNLPDL I
Sbjct: 245 KFFLLHISLLREYLSLEFQDLENQ--LTFEYNFERILDDFILIMYVIGNDFLPNLPDLFI 302
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GA PLL V ++ L DGYINE G +NLKR + KL++F+FE F +K D+++
Sbjct: 303 NKGAFPLLIAVIKQALLDSDGYINENGKINLKRLNIYFKKLSNFEFENFEKKEVDVEWF- 361
Query: 438 GKMGKKFSDV-FHKEKSKEMDPDLAALIKATDDDYDDGT-------------EEVLNYAN 483
KK +DV EK ++ L LI D G+ E +L+ N
Sbjct: 362 ---NKKLNDVSISGEKKRQQ---LGKLIILKDQKKLVGSIKPWLMEWASQPIETLLSLEN 415
Query: 484 YEE---YYYSDEDEEWRTNFFSEFG---------QHKTDYYHYKLDYAKV---------- 521
+ + +D E +F EF D Y K+D +
Sbjct: 416 EGKLPTLKLNKDDVENNLDFIKEFALQAGFLIIHSKSNDTYEAKIDVDGIIPTESEEERN 475
Query: 522 --------------------TNEVLRDQAECYIRAIQ-WNLHYY---------------- 544
+ EVL + Y + W +YY
Sbjct: 476 DRINELRKTIKEYQSAELIESEEVLNETKSVYSHKFEDWKDNYYKSKLHFSIKEDKEELL 535
Query: 545 -----YNGCVSWSWYY------------PHHYAPYISDIKDF------SHLNLKYEMGEP 581
Y + W YY +HYAP ISDI +++ L +E P
Sbjct: 536 KLTTHYVEGLQWVLYYYYRGVPSWNWFYKYHYAPRISDISLGLEYLIENNIELTFEKSHP 595
Query: 582 FLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIP 641
F PF+QL+AVLPA S++L+P Y+ LMT E SPI+ +YP E D+NGK WEAVVL+
Sbjct: 596 FKPFEQLMAVLPARSRKLMPLVYRPLMTDEKSPIINFYPHEVDIDMNGKTASWEAVVLLD 655
Query: 642 FIDEVKLIKAMDAVEHLLTDEERSRNRHG--------PMLVYTYSNVNLGTALAPDYFPA 693
F+DE KLI + +E LT +E +RN +G P + + Y T+L P +FP
Sbjct: 656 FVDEKKLIDVLKPIEEKLTPDETARNSYGSPIKFIHNPQIDHVYP-----TSL-PGFFPD 709
Query: 694 INENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKHVQFTHKIENAKVKV 752
+ + E+ +I LR G + L + FPTL V FT ++ VK+
Sbjct: 710 LEHDKCYEEDFVLPEI----KDLRIGFIEGAKTGLDLLAGFPTLDSVPFTSELALNDVKI 765
Query: 753 FQQPSRNESIIIVQDKVQVP-SLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRI-SF 810
F PSR+ES+++ + V ++ Q A Q + K ++ +P L E RV V +++ S+
Sbjct: 766 FNFPSRSESMVLNIENVWADLTVAQFAQQFMNKLVYSKWPFLRECRVVRVMDNETKYESY 825
Query: 811 DKNSG---PVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFF 867
+G V + D + F+ + + + GV +G +VLVY +PV
Sbjct: 826 RTETGLKKVVGTELSSDERKQFRSDVSTTRVTFDKQKGVKLGAIDVLVYVKPV------- 878
Query: 868 GPRGKVTQQR-----TFIRSTVTYAYQ---SAVLNLQQARESLEYKTIDEIFYPGCQCFA 919
G + QR T+ + Y Q V+N + S ID+ F Q
Sbjct: 879 --NGLIRNQRGAYVKTYAKEEEVYPIQLIVKEVINKDERYASRPALPIDQEFPLESQVVF 936
Query: 920 LSNPHYGSGGCVISTVKEENSFIKLSFKVQQ--EPDLSDLVHLQDDTVYNYLPSYTVASK 977
L + YGS V+ ++ FK+Q EP++ ++ NY PS+ V+
Sbjct: 937 LGDMAYGSPAKVVGFSDDKKKLNIKIFKIQSTAEPNIGKKRLAVENKEINYYPSFEVSKT 996
Query: 978 LSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTE 1037
L +S LLSR T + D G + NIGL +KF K ++V+G+TR+ K W ++
Sbjct: 997 LRMSSYLLSRITSQFMVKD----GRQSINIGLELKFESKRQKVLGYTRKSANGKFWEFSP 1052
Query: 1038 QVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEV 1097
V LI Y +FP +F L++ DV + ++ SWLKE K+E+
Sbjct: 1053 LAVNLINKYKTKFPALFKNLENVGQG----IPDVSEISSSSEIKEVRSWLKE---VKSEL 1105
Query: 1098 RPCGAA----------VVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLYIPKPTLDKLC 1147
P ++ + + I + V T K + + P + + +L
Sbjct: 1106 IPVSLESESFTKFSYQAIEQYMDNYILNQVPTINKDIRGV-----PREAILNAGESYQLL 1160
Query: 1148 PDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI--VQGETSYDAMYDVVFDKPFPHGVKI 1205
D +F+L DRV+ ++D VP+ +GT+ I V +TS V+FD+P G +
Sbjct: 1161 --SDQRFELGDRVIYVQDFGKVPILSKGTVASILTVGSKTS----LGVIFDEPLLGGNNM 1214
Query: 1206 --RCSESRGYRMPAQAMINLS 1224
+ + SRG + + ++NLS
Sbjct: 1215 GGKLNSSRGLIIDSSLVLNLS 1235
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFR+ISER+P +S+++ E QIPEFDNLYLDMN I+H C+H ND D R+T+ Q+
Sbjct: 1 MGIPKFFRFISERWPLISQLIDENQIPEFDNLYLDMNSILHACTHSND-DTLTRLTDDQM 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ IF+YI+ LF++I+PKK F+MAIDGVAPRAKMNQQR RRFR+A EAE +KA GE
Sbjct: 60 YSAIFNYIDHLFQIIKPKKTFYMAIDGVAPRAKMNQQRARRFRTAYEAEENLKKAIANGE 119
Query: 121 RLPTEKRFD 129
+P E FD
Sbjct: 120 VIPKEDPFD 128
>gi|68467259|ref|XP_722291.1| hypothetical protein CaO19.12434 [Candida albicans SC5314]
gi|46444252|gb|EAL03528.1| hypothetical protein CaO19.12434 [Candida albicans SC5314]
Length = 1469
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 398/1213 (32%), Positives = 602/1213 (49%), Gaps = 174/1213 (14%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K F+MAIDGVAPRAKMNQQR RRFR+A EAE+ +KA E GE +P E FDSN ITPG
Sbjct: 41 PQKTFYMAIDGVAPRAKMNQQRARRFRTAYEAEINLKKAIENGEEIPKEDPFDSNSITPG 100
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM L L+YF+ KIT D W ++ +ILSGHE PGEGEHKIM+YIR
Sbjct: 101 TEFMANLTNNLKYFIHKKITEDS---------SWANIEIILSGHEVPGEGEHKIMEYIRS 151
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
++S+ DYNPN+RHC+YGLDADLIMLGL TH+P+F+LLREEV F + G + +
Sbjct: 152 IRSQDDYNPNLRHCIYGLDADLIMLGLVTHDPHFALLREEVTFGPQRKVGPKDL---HDQ 208
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
KF+LLHLSL+R+YL LEF +++ L+F + + I+DD++L+ ++IGNDF+PNLPDL I
Sbjct: 209 KFYLLHLSLLREYLSLEFQEIENQ--LNFEYDFDRILDDFILIMYVIGNDFLPNLPDLFI 266
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GA PLL +++ L DGYINE G +NL R ++ L+ F+FE F + D+++
Sbjct: 267 NKGAFPLLIAAFKQTLLESDGYINENGKINLVRLNIYIKILSKFEFENFEKHEVDVEWFN 326
Query: 438 GKM------GKKFSDVFHKEKSKEMDPDLAALIKATDDDY-DDGTEEVLNY---ANYEEY 487
K+ G+K K + L IK ++ E+LN
Sbjct: 327 KKLDDISISGEKKRQRIGKLLILKEQKKLVGFIKPWLMEWASQPINEILNLDQQGKLPTL 386
Query: 488 YYSDEDEEWRTNFFSEFG---------QHKTDYYHYKLDYAKV----------------- 521
+ + +D E F EF D Y KLD +
Sbjct: 387 HLNKDDVEKNLEFIKEFAIEAGFLIIHSQSNDTYEAKLDIDGISPTESEEEHEERITELR 446
Query: 522 -------------TNEVLRDQAECYIRAIQ-WNLHYY----------------------- 544
+ EVL + E Y Q W YY
Sbjct: 447 KTIKQYQSANLIESEEVLNETKEVYSEKFQSWKNDYYQPKLHFSIDTEEGKGDLIEMTKH 506
Query: 545 YNGCVSW------------SWYYPHHYAPYISDIK-DFSHL-----NLKYEMGEPFLPFQ 586
Y + W +WYY +HYAP ISDI L +LK+E+ PF PF+
Sbjct: 507 YIEGLQWVLYYYYRGCPSWNWYYRYHYAPRISDISLGLEELINEKTDLKFELSHPFKPFE 566
Query: 587 QLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEV 646
QL+AVLPA SK+L+P Y+ LM+ E SPI+ +YP E D+NGK WEAVVL+ F+DE
Sbjct: 567 QLMAVLPARSKKLMPVVYRPLMSDEKSPIINFYPHEVDIDMNGKTASWEAVVLLDFVDEK 626
Query: 647 KLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNV--NLGTALAPDYFPAINENHAVEKPL 704
KLI+A+ +E LT EE+ RN +G + + ++ ++ ++ P +F I + E+
Sbjct: 627 KLIEALKPIESKLTPEEKQRNSYGHAIKFIHNPQIDHVFSSPLPGFFHDIEHDQCYEEEF 686
Query: 705 YRDDIYVHPNKLRKGLCQDVNL-KLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESII 763
I L+ G + K + FPTL + FT ++ +VK+F PSR+ES+I
Sbjct: 687 KLPKI----ENLKIGFIKGAKTGKDLLAGFPTLSTIPFTSELALNEVKIFNFPSRSESMI 742
Query: 764 I-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRI-SFDKNSG---PVF 818
+ V+D ++ Q A + K ++ +P L E RV V +++++ S N+G V
Sbjct: 743 LNVEDVWSDLTVAQFAQSFVNKLVYSKWPFLRECRVVKVVSEENKFESIKTNTGLKKVVT 802
Query: 819 ERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRT 878
+ + + +F+ ++ + GV +G LVY +PV K +T
Sbjct: 803 NELSVEDKKSFRSEVSNLKVTWDKFKGVKLGEINALVYVKPVNG----LIRNHKGAYVKT 858
Query: 879 FIRSTVTYAYQ---SAVLNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTV 935
+ + Y Q V N Q + ID+ F Q L + YGS ++
Sbjct: 859 YSKDVEVYPLQLIVKEVTNKDQRYLTRPPLPIDQEFPIDSQVVFLGDMAYGSPAKIVGYN 918
Query: 936 KEENSFIKLSFKVQQ--EPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIF 993
+++ FK+Q EP++ + Y PS+ VA L ++PLLLS+ T
Sbjct: 919 EDKTKLGVKIFKIQSTAEPNIGKKRLTIEKNEIKYYPSFEVAKTLRLNPLLLSKITSQFM 978
Query: 994 IIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEV 1053
+ DS++ + NIGL +KF K ++V+G+TR+ K W ++ + LI Y +FP +
Sbjct: 979 VQDSSK---GKVNIGLELKFESKRQKVLGYTRKSSNGKFWEFSPLAINLINTYKTKFPGL 1035
Query: 1054 FGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLI 1113
F L ++ S + D E + +I SWLKE K+E+ P VSL
Sbjct: 1036 FKKLVNNVSGSNFPTVDEISSLEE--LKEIRSWLKE---VKSELIP----------VSLE 1080
Query: 1114 EHAVD--TCEKVEKQITLFVKPNKLYIPKPTLDKLCPD----------------PDTKFK 1155
+ + + +E+ + ++ N++ PT++K D +F+
Sbjct: 1081 SESFTKFSYQAIEQYMDNYLSMNQI----PTINKDIKGVPREAILNANESYQLLSDQRFE 1136
Query: 1156 LFDRVVNIRDCYTVPLGYRGTIIGI--VQGETSYDAMYDVVFDKPFPHGVKI--RCSESR 1211
L DR++ ++D V + +GT+ I V +TS V+FD+P G + + + +R
Sbjct: 1137 LGDRIIYVQDFGKVSILSKGTVASILTVGSKTS----LGVIFDQPLLSGNNMNGKLNSNR 1192
Query: 1212 GYRMPAQAMINLS 1224
G + + ++NL+
Sbjct: 1193 GLIIDSSLVLNLT 1205
Score = 117 bits (293), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MN I+H C+H NDN R+++ Q++ IF+YIE LF++I+P+K F+MAIDGVAPRAKMN
Sbjct: 1 MNSILHTCTHSNDNTIT-RLSDDQMYAAIFNYIEHLFQIIKPQKTFYMAIDGVAPRAKMN 59
Query: 96 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
QQR RRFR+A EAE+ +KA E GE +P E FD
Sbjct: 60 QQRARRFRTAYEAEINLKKAIENGEEIPKEDPFD 93
>gi|397628044|gb|EJK68715.1| hypothetical protein THAOC_10078 [Thalassiosira oceanica]
Length = 1579
Score = 554 bits (1428), Expect = e-154, Method: Compositional matrix adjust.
Identities = 396/1309 (30%), Positives = 618/1309 (47%), Gaps = 218/1309 (16%)
Query: 5 KFFRYISERYPCLSEVV-REYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQD 63
+F+R++SERYP +++V+ E +PEFD+LYLDMNGIIH C+HPN D +TE+ +
Sbjct: 62 QFYRWLSERYPKINQVITNEALLPEFDHLYLDMNGIIHGCTHPNHLDVSDVLTERDMVLG 121
Query: 64 IFHYIE-ILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERL 122
I HY++ I+ ++++PK FMAIDGVAPRAK+NQQR RRFRSAK+ L + KE
Sbjct: 122 IMHYLDRIITQIVKPKVSVFMAIDGVAPRAKLNQQRSRRFRSAKD---LAEATKEAQRLR 178
Query: 123 PTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGER 182
P IDG P
Sbjct: 179 P----------------------IDGADPD------------------------------ 186
Query: 183 LPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHE 242
P FDSNCITPGT F+ R+ +RYF++ KI D L W+++ VI SG E
Sbjct: 187 -PYAGAFDSNCITPGTEFLLRISNCIRYFIRKKIKEDPL---------WRNLSVIFSGPE 236
Query: 243 TPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNT 302
PGEGEHKIM +IR M+++ Y PN RHC+YG DADLIMLGL +HEP+F+LLRE + F+
Sbjct: 237 VPGEGEHKIMQHIRDMRNQLGYRPNTRHCMYGQDADLIMLGLVSHEPHFTLLREIIDFSG 296
Query: 303 KSNKGGSQIVT----PEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
+ + + +++ F LLHLS++R+YLE+EF + + +E IIDD+V
Sbjct: 297 GFGRNDNALKEVKKFTKQSDFQLLHLSILREYLEIEFAYQHDQST----YDLERIIDDFV 352
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDG--YINEGGYL-NLKRFEKFL 415
M FL+GNDF+P++P L I +GA LL+ Y+E Y+ + G + N R E FL
Sbjct: 353 FMTFLVGNDFLPHMPTLDIGDGAFTLLFDTYREQRARWGNGQYLTDSGEIPNPARLEAFL 412
Query: 416 TKLASFDFEQFREKYADIQYLEGKM-------GKKF--SDVFHKEKSKEMDPDLAALIKA 466
+ + + E F E+ + + K GK SD+ E D A++++
Sbjct: 413 KVIGAAETEIFEERAKNEVVMRKKQRRWDKRDGKSSMPSDLEIAEVEASKQSDYNAMVRS 472
Query: 467 TDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVL 526
D GT+ V + E S++D HK YY+ KL V
Sbjct: 473 MMADVSSGTQVVEGWKQVGE---SEKD-------------HKGRYYYEKLQLKPVDIAGH 516
Query: 527 RDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHL--NLKYEMGEPFLP 584
+ YI + W L YYY GC+SW W++P+HY P ISD+ + + ++++E+G+P P
Sbjct: 517 LALRKSYIEGLIWCLAYYYRGCISWGWFFPYHYGPMISDLTNLPAVFQSIRFEIGQPLKP 576
Query: 585 FQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFID 644
F+QL+ LP AS L+P Y+ LM+ SPI +YYP F D+NGK+ WE V ++PFID
Sbjct: 577 FEQLMGCLPPASSALVPRIYRQLMSSPESPIKQYYPNSFVVDMNGKRNPWEGVNILPFID 636
Query: 645 EVKLIKAM--DAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHA--- 699
+L A+ + + LLT EER+RNR G + Y+Y D P+ N +
Sbjct: 637 ANRLKDAIKDNCPDRLLTAEERNRNRVGQVFCYSYDEA------CNDTIPSCNRDIGLPN 690
Query: 700 VEKPLYRDDIYVHPNKLRKGLCQDV--NLKLYVTHFPTLKHVQFTH-KIENAKVKVFQQP 756
+EK R + ++ ++ K+ FP+L + ++ NA + F
Sbjct: 691 IEKCHSRVITIDNSSESTVSFSPELIPGTKIPYPGFPSLNVLPIERVELRNAGLNCFGFA 750
Query: 757 SRNESIIIVQDKV-QVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSG 815
S+ + I+ + Q+PS +Q+A ++GK+I++N+P + E +V AV S + K
Sbjct: 751 SKYPNTILTMHTLPQLPSAEQLAANLIGKSIYVNWPMMHEAKVVAVTDSKSEVRMVKKKL 810
Query: 816 PVFERAAKDMQDAFQLSKKSITD-----GYYTKLGVDIGNTEVLVYGQPVESRKYFFGPR 870
++++ +S+K + GY GV IG+ ++ + P++ K P
Sbjct: 811 KTRRHGLQEVERWNAISEKMVEQYLAGAGYPGSGGVQIGDVQIRLKILPLQGMKA--SPL 868
Query: 871 GKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEY----------KTIDEIFYPGCQCFAL 920
+++ + + A L LQ A S K++ + F C+
Sbjct: 869 DGSSKK--------LFGKEEADLPLQMALASSPAPDPRFIERGPKSLKDRFPSKCKVVLT 920
Query: 921 SNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSI 980
+ G G V+ST+ ++ +K+S + EP + + +Y+ S A L +
Sbjct: 921 KGKYRGCIGTVLSTLDKDKVGVKVSV-IPPEPPFG--LAIARSVGESYISSGDAARVLKM 977
Query: 981 SPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTR----RDETTKK---- 1032
+P + R TG++F ++++GLN+K+ R V+G+TR +E KK
Sbjct: 978 NPKVFGRVTGNLFF------SPGKYDLGLNLKY-RDRRYVLGYTRIKQDPNEAKKKKTSN 1030
Query: 1033 ----------------------------------WFYTEQVVTLIKNYMKQFPEVFGFLK 1058
W +T + V L+ Y FP +F L
Sbjct: 1031 AWSAGDTVLVVGSKRMSASDEDFDSAGEEKKRTIWEFTPKAVRLVAAYKNAFPHLFAALA 1090
Query: 1059 DHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD 1118
+ Y VF +GE+ A+++ WLK A P + V ++ A D
Sbjct: 1091 RDPDERFYDAKKVFGPKGEETCARVLQWLKATETAAMPRLPDKTEAMPVAAVHAVQRAAD 1150
Query: 1119 TCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKF------------KLFDRVVNIRDC 1166
++ + VK + + IP L + T +L DRV N+ C
Sbjct: 1151 VRSASVRKDGV-VKESNVKIPAAALYRESSTAATDVLLASENSVSAPPELGDRVANL--C 1207
Query: 1167 YT-VPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIR--CSESRG 1212
+ VP G RGT++ I + +VV D+ F G ++ C+ RG
Sbjct: 1208 ASGVPFGARGTVVAI---HDPSEGCVEVVMDEEFIGGSTLQGSCANFRG 1253
>gi|32766355|gb|AAH55175.1| Zgc:63635 protein [Danio rerio]
Length = 510
Score = 554 bits (1427), Expect = e-154, Method: Compositional matrix adjust.
Identities = 281/507 (55%), Positives = 362/507 (71%), Gaps = 28/507 (5%)
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
RRFRSAKEAE +KA EKGE LPTE RFDSNCITPGT FM RL +QL+YFV K++TDK
Sbjct: 11 RRFRSAKEAEEKIKKALEKGEVLPTEARFDSNCITPGTDFMARLQEQLKYFVHNKLSTDK 70
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W+ V V LSGHETPGEGEHKIM++IR +KP +NPN RHCLYGLDADLI
Sbjct: 71 ---------TWQGVNVYLSGHETPGEGEHKIMEFIRSESTKPGHNPNTRHCLYGLDADLI 121
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKE 340
MLGL +HEP+FSLLREEV+F K K +I PEET F LLHLSLMR+Y++ EF +L++
Sbjct: 122 MLGLTSHEPHFSLLREEVRFGGK--KSQKRITAPEETTFHLLHLSLMREYIDYEFSELRK 179
Query: 341 PGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYI 400
+SF + +E IIDDWVLMGFL+GNDFIP+LP LHI + ALPLLY+ Y VLP+L GY+
Sbjct: 180 K--ISFEYDLERIIDDWVLMGFLVGNDFIPHLPHLHINHDALPLLYRTYINVLPSLGGYL 237
Query: 401 NEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDL 460
NE G+LNL FEK+L KL+ FD E F E + D+++ E K+G K+ + ++E D
Sbjct: 238 NENGHLNLTHFEKYLEKLSDFDREHFSEVFVDLKWFESKVGNKYVNEAAGLAAEEADGRD 297
Query: 461 AALIKATDDDYD----DGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKL 516
K++DD DG + + A E ++ED E F +EF Q+K YY K+
Sbjct: 298 MKKSKSSDDSLCLAALDGVRDSHSTAGRAEG--AEEDGEDDDMFETEFRQYKRTYYMTKM 355
Query: 517 DYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKY 576
V++E L +QA+CY+ IQW LHYYY+G SWSWYYP+HYAP++SD+++ S L+L +
Sbjct: 356 GVEVVSDEFLANQAKCYVEGIQWILHYYYHGVQSWSWYYPYHYAPFLSDVRNISGLSLTF 415
Query: 577 EMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEA 636
++ +PF+PF+QLLAVLP+ASK+LLP+ YQ+LMT +SPI+EYYP++F TDLNGK+Q+WEA
Sbjct: 416 DLAKPFMPFEQLLAVLPSASKDLLPQCYQHLMTSLSSPIVEYYPQDFKTDLNGKQQEWEA 475
Query: 637 VVLIPFIDEVKLIKAMDAVEHLLTDEE 663
VVLIPFI DA+ H TD +
Sbjct: 476 VVLIPFI---------DALNHYTTDAD 493
Score = 45.8 bits (107), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 24/30 (80%)
Query: 100 RRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
RRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 11 RRFRSAKEAEEKIKKALEKGEVLPTEARFD 40
>gi|254571103|ref|XP_002492661.1| Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic
processing (P) bodies [Komagataella pastoris GS115]
gi|238032459|emb|CAY70482.1| Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic
processing (P) bodies [Komagataella pastoris GS115]
gi|328353336|emb|CCA39734.1| 5'-3' exoribonuclease 1 [Komagataella pastoris CBS 7435]
Length = 1451
Score = 551 bits (1420), Expect = e-153, Method: Compositional matrix adjust.
Identities = 402/1240 (32%), Positives = 622/1240 (50%), Gaps = 188/1240 (15%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P K FFMAIDGVAPRAKMNQQR RRFR+A EAE + A++ G ++ FDSNCITPG
Sbjct: 76 PGKTFFMAIDGVAPRAKMNQQRSRRFRTAIEAEKSVEIAQKNGLITSKDENFDSNCITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM ++ L++F+ KI++D W+ V VILSGHE PGEGEHKIMDYIR+
Sbjct: 136 TEFMAKVTTNLKFFIHQKISSDA---------KWQKVQVILSGHEVPGEGEHKIMDYIRF 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
+K++ Y+PN RHC+YGLDADLIMLGL H+P+F++LREEV F S + + E
Sbjct: 187 LKAQEGYDPNTRHCIYGLDADLIMLGLVIHDPHFAILREEVVFGRGSKASSTDV---SEQ 243
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
+F+LLHLSL+R+YL LEF L++ + F + +E I+DD++ + ++IGNDF+PNLPDLHI
Sbjct: 244 QFYLLHLSLLREYLALEFKDLEDQ--IKFDYDLERILDDFIFIMYVIGNDFLPNLPDLHI 301
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQY-- 435
GA P L +E + DGY+ EGG +N++RF +L L+ F+ + F + D+++
Sbjct: 302 NKGAFPRLLATIKETMIDSDGYLQEGGVINMERFGLWLDHLSQFELQNFEQVDVDVEWFN 361
Query: 436 -------LEG-----KMGKKFSDVFHKEKSKEMDPDLAALIKATDDDY----DDGTEEVL 479
L+G + G+K +E ++ P + + D+ Y DD L
Sbjct: 362 KQLENISLDGERKRERAGRKLLLRRQQELISKLRPWILEFYSSRDNIYSAHDDDSLIPTL 421
Query: 480 NYANYEEYYYSDEDEEWRTNFFSEFG---------QHKTDYYHYKLDYAKV-TNE----- 524
+EE + F +F + YH K+D + NE
Sbjct: 422 QLDT------ELMEEEIKLPFIKQFALDVGFFIVHSKSQNTYHAKIDIDGINVNESDEEF 475
Query: 525 ------------------------VLRDQAECY-IRAIQWNLHYY--------------- 544
L +Q Y + + W YY
Sbjct: 476 EARVLYIRKKIKEYENSIFVEDENTLEEQKNIYDTKFVNWKNKYYKEKFGFTLSDTEDIL 535
Query: 545 -----YNGCVSWSWYYPHH-------YAPY-----ISDIKDFSHLNLKYEMGEPFLPFQQ 587
Y + W +Y + Y PY ISDIK L+++ G PF PF+Q
Sbjct: 536 KLTESYIQGLQWVLFYYYRGVPSWQWYYPYYYAPRISDIKLGIKACLEFDKGTPFKPFEQ 595
Query: 588 LLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVK 647
L+AVLPA SK+L+P Y+ LMT NSPI+E+YP+E D NGK WEAVV I F+DE +
Sbjct: 596 LMAVLPARSKQLVPACYRPLMTDPNSPIIEFYPDEVEIDKNGKTASWEAVVKINFVDEKR 655
Query: 648 LIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NVN-LGTALAPDYFPAINENHAVEKPLY 705
L++A++ L EER RN G + ++Y VN + ++ P FP I E+H E +
Sbjct: 656 LLEALEPYNSKLNAEERQRNSLGTNIEFSYHPQVNQVHSSPIPTIFPDITEDHCYEIVVE 715
Query: 706 RDDIYVHP-NKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII 764
D ++ K KG Q +NL + FPTLK + FT ++ A+ +F QP+++ES+I+
Sbjct: 716 FDKLHSSTYAKPMKGAKQGINL---LAGFPTLKTIPFTSQLMLAECHIFNQPTKSESMIL 772
Query: 765 -VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPV-FERAA 822
Q+ + +++Q A Q LG+TI++N+P+L E +V VA D F+ + + R
Sbjct: 773 STQNPFEGLTVEQFAAQNLGQTIYVNWPYLKEAKV--VAVSDGLNVFEPGNKSIRTTRME 830
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGN-TEVLVYGQPVESRK----------YFFGPRG 871
F + I++ + + GV + N TE + G P R F
Sbjct: 831 SSEVSEFASDVRYISETLFKRKGVLLVNYTEEELQGTPEPRRSPHNDDAIQGIVFVKKVN 890
Query: 872 KVTQQRT--FIRSTVTYAYQSAVLNL------QQARESLEYKTI--DEIFYPGCQCFALS 921
V + R+ +++ T + + +NL + R LE + +E F G +L
Sbjct: 891 GVIRTRSGAYVK-TYSDKIEKYPINLLVDDVVNKDRRLLEKPPVPLEEEFPKGTTLISLG 949
Query: 922 NPHYGSGGCVISTVKEENSFIKLSF---KVQQEPDLSDLVHLQDDTVYNYLPSYTVASKL 978
YG+ V V +N + + F ++ E + ++ ++ Y PS+ VA +
Sbjct: 950 AFAYGTPATV---VDHQNDLMTVRFVNQPIKHEFNYGEIQAQREAHTNVYYPSFKVAKIV 1006
Query: 979 SISPLLLSRFTGSIFIIDSTEEGAKRH-NIGLNIKFSRKNEEVVGFTRRDETTKKWFYTE 1037
I+ L LSR T S I++ GAK+ NIGL++KF + +V+G+T+R+E K W Y+
Sbjct: 1007 GITALALSRITSSYRIVN----GAKKTVNIGLDLKFEGRKLKVLGYTKRNE--KHWSYSA 1060
Query: 1038 QVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPH----QGEQRVAQIVSWLKEQPHA 1093
V L++ Y K+FP VF + + I ++FP Q +++V ++V+W+KEQ
Sbjct: 1061 LAVNLLQQYQKRFPSVFKIISLRNDSSIPEAKELFPQVPASQVDEKVNELVAWVKEQK-- 1118
Query: 1094 KAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDT- 1152
+ A ++++ ++ + + K+E+++ FV +IP+ L K P T
Sbjct: 1119 ----KSFVVATLESESLTKV-----SIGKIEQEVIKFVSKPHEHIPQKGL-KGVPREATL 1168
Query: 1153 ------------KFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFP 1200
F L DRV+ + D VP +GT+IG+ T +V+FD P
Sbjct: 1169 DISNSSQFLSKQTFNLGDRVIYVEDSGKVPNFSKGTVIGVRSVGTK--VTLNVLFDLPLL 1226
Query: 1201 HGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPHVK 1238
G R + RG + + ++NL+ + + + P K
Sbjct: 1227 SGNTFDGRLATPRGVTVDSSLVLNLTKRQLIYHDRKPAKK 1266
Score = 160 bits (404), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 95/129 (73%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P +SE + + QI EFDNLYLDMN I+HNC+H ND + E+++
Sbjct: 1 MGIPKFFRYISERWPMISEPIEDSQIAEFDNLYLDMNSILHNCTHSNDGSVDL-MKEEEM 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF YIE LF +I+P K FFMAIDGVAPRAKMNQQR RRFR+A EAE + A++ G
Sbjct: 60 FSAIFAYIEHLFTLIKPGKTFFMAIDGVAPRAKMNQQRSRRFRTAIEAEKSVEIAQKNGL 119
Query: 121 RLPTEKRFD 129
++ FD
Sbjct: 120 ITSKDENFD 128
>gi|149239226|ref|XP_001525489.1| 5'-3' exoribonuclease 1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450982|gb|EDK45238.1| 5'-3' exoribonuclease 1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 1512
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 400/1213 (32%), Positives = 602/1213 (49%), Gaps = 158/1213 (13%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT 185
F++I F PK+ F+MAIDGVAPRAKMNQQR RRFR+A EAE +KA E GE +P
Sbjct: 29 FNYIDHLFSIIKPKQTFYMAIDGVAPRAKMNQQRARRFRTAYEAEENLKKAIENGEDIPK 88
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPG 245
E FDSN ITPGT FM +L L+YF+ KIT D W + V +ILSGHE PG
Sbjct: 89 EDPFDSNSITPGTEFMAKLTDNLKYFIHKKITEDSRWAN---------VEIILSGHEVPG 139
Query: 246 EGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFN-TKS 304
EGEHKIM+YIR ++++P+Y+PN+RHC+YGLDADLIMLGL +H+P+F+LLREEV F +
Sbjct: 140 EGEHKIMEYIRAVRAQPEYDPNLRHCIYGLDADLIMLGLVSHDPHFALLREEVTFGPRRG 199
Query: 305 NKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLI 364
N G + VT E KF+LLHLS++R+YLELEF +++E +SF F E I+DD++L+ ++I
Sbjct: 200 NSSGPKDVT--EQKFYLLHLSVLREYLELEFKEIEEQ--ISFEFDFERILDDFILIMYVI 255
Query: 365 GNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA----- 419
GNDF+P+LPDLH+ GA PLL +++ L DGYINE G +NLKR ++ L+
Sbjct: 256 GNDFLPHLPDLHLNKGAFPLLLSTFKQTLLQSDGYINEDGKINLKRLNIWVHHLSEFEFE 315
Query: 420 -----SFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDG 474
D E F +K D+ K KK + ++ K++ + +
Sbjct: 316 NFEEKEVDIEWFNKKLDDVSISGEKKRKKIGKMLILKEQKKLVGYIKPWLMEVS---SQP 372
Query: 475 TEEVLNYANYEE---YYYSDEDEEWRTNFFSEFGQH---------KTDYYHYKL------ 516
++++AN ++ ED E +F EF H D Y K
Sbjct: 373 VSTLIDWANEDKLPLLPLRKEDVENNLDFLKEFALHAGFLIVHSKSEDNYTAKFDVDGLP 432
Query: 517 ------DYAKVTNEVLRD----------QAECYIRAIQ---------WNLHYY------- 544
D+ + NE+ R ++E Y+ + W YY
Sbjct: 433 SFETRDDFEERINELRRTVKQYQAANLVESESYLNETKEVYQTKFKNWKNDYYKEKLHFS 492
Query: 545 -------------YNGCVSW----------SW--YYPHHYAPYISDIK-DFSHL-----N 573
Y + W SW YY +HYAP ISDI L +
Sbjct: 493 IDDKEDLLKITEHYVEGLQWVLYYYYRGCPSWNFYYRYHYAPRISDISLGLEALIEKGED 552
Query: 574 LKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQD 633
LK+E PF PF+QL+AVLPA S++L+P Y+ LM E SPI+++YP E D+NGK
Sbjct: 553 LKFEQSHPFKPFEQLMAVLPARSRKLMPAVYRPLMIDEKSPIIQFYPHEVDVDMNGKTAT 612
Query: 634 WEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG-PM-LVYTYSNVNLGTALAPDYF 691
WEAVVL+ F+DE KLI A+ +E LT EE+ RN +G P+ ++ + ++ P +F
Sbjct: 613 WEAVVLLDFVDEKKLIAALKPIEEKLTPEEKKRNSYGFPVKFIHNPQIDRVFSSPLPGFF 672
Query: 692 PAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVK 751
I + E+ ++ + +G +L + FPTL+ + FT ++ +VK
Sbjct: 673 HDIEHDKCYEEKFDLPEVKEYKIGHIEGARSGTDL---LAGFPTLQTIPFTFELAQNEVK 729
Query: 752 VFQQPSRNESIIIVQDKVQVP-SLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISF 810
VF SR+ES+I+ + V S++Q A + +G+ ++ ++P L E +V V D F
Sbjct: 730 VFNFSSRSESMILNIENVWADISVEQFAQRFVGRLVYSSWPFLRECKVVKVV--DGTNKF 787
Query: 811 DKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKL--------GVDIGNTEVLVYGQPVES 862
+ P ++ + + L +K + L V +GN EVLV+ QPV
Sbjct: 788 ESVKSPNGKKLV--VTNELDLGEKRAHNSECNNLTFVWDKTKAVRLGNVEVLVHVQPVNG 845
Query: 863 RKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYK---TIDEIFYPGCQCFA 919
K +T+ + Y Q V + + IDE F G Q
Sbjct: 846 ----LIRNSKGAYVKTYSKEVEVYPLQLIVKEVTNKDPRFTTRPPLPIDEEFPLGSQVVF 901
Query: 920 LSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLS 979
L + YGS V+ ++ + + EP++ + + YLPS+ V+ L
Sbjct: 902 LGDMAYGSPARVVGYSGDKLNVQIFKIQSSAEPNIGKRRLIVESKEIQYLPSFEVSKALR 961
Query: 980 ISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQV 1039
I+PLLLS+ T I D G ++ NIGL +KF K ++V+G+TR+ K W ++
Sbjct: 962 INPLLLSKITSQYMIRD----GNQKTNIGLELKFESKRQKVLGYTRKLYNGKFWEFSPLA 1017
Query: 1040 VTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRP 1099
+ LI Y +FP++F L D+ + Q E ++ + WLKE K + P
Sbjct: 1018 MNLINTYKTKFPQLFAALSKLDGSDMPQASQLLT-QDELKLVR--KWLKE---VKEDFIP 1071
Query: 1100 CGAAVVDAKVVSL--IEHAVDTCEKVEKQITLFVKPNKLYIPKPTL----DKLCPDPDTK 1153
S IE+ +D+ + + L K + +P+ + D + K
Sbjct: 1072 VSLESQSLTKFSFAAIENYMDSY--IANPVPLLNKDIR-GVPRNAILNASDSYQLLSEQK 1128
Query: 1154 FKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESR 1211
F L DRVV ++D VP+ +GT+ I + ++FD P G + + S +R
Sbjct: 1129 FDLGDRVVYVQDHGKVPILSKGTVGSIFTAGSKTSLA--IIFDTPQLSGSNMNGKLSSNR 1186
Query: 1212 GYRMPAQAMINLS 1224
G + + ++NL+
Sbjct: 1187 GLLIDSSLVLNLT 1199
Score = 110 bits (276), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MN I+H C+H ND R+++ Q++ IF+YI+ LF +I+PK+ F+MAIDGVAPRAKMN
Sbjct: 1 MNSILHTCTHSNDGSLS-RLSDDQMYAAIFNYIDHLFSIIKPKQTFYMAIDGVAPRAKMN 59
Query: 96 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
QQR RRFR+A EAE +KA E GE +P E FD
Sbjct: 60 QQRARRFRTAYEAEENLKKAIENGEDIPKEDPFD 93
>gi|50312097|ref|XP_456080.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645216|emb|CAG98788.1| KLLA0F22385p [Kluyveromyces lactis]
Length = 1453
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 396/1221 (32%), Positives = 600/1221 (49%), Gaps = 184/1221 (15%)
Query: 130 FITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRF 189
F T+K PK+ F+MAIDGVAPRAKMNQQR RRFR+A +AE QKA E G+ LP + F
Sbjct: 72 FHTIK---PKQTFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALQKAIENGDELPKGEPF 128
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSN ITPGT FM +L + L+YF+ KIT D W++ V VI SGHE PGEGEH
Sbjct: 129 DSNAITPGTEFMAKLTENLKYFIHDKITNDTRWQN---------VKVIFSGHEVPGEGEH 179
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGS 309
KIMDYIR ++++ DYNPN RHC+YGLDADLI+LGL TH+ +F LLREEV F +S S
Sbjct: 180 KIMDYIRAIRAQEDYNPNTRHCIYGLDADLIILGLSTHDHHFCLLREEVTFGKRS----S 235
Query: 310 QIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFI 369
+ T E FFLLHLS++R+YL LEF ++ + + F + E ++DD++ + F IGNDF+
Sbjct: 236 SVKTLETQNFFLLHLSILREYLALEFEEITDS--VQFEYDFERVLDDFIFVLFTIGNDFL 293
Query: 370 PNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
PNLPDLH+ GA P+L + ++E L +DGYINE G +NL RF +L L+ F++ F +K
Sbjct: 294 PNLPDLHLKKGAFPVLLQTFKEALQHMDGYINEQGKINLARFSIWLKYLSDFEYLNFEKK 353
Query: 430 YADIQY---------LEG-----KMGKKFSDVFHKEKSKEMDPDLAALI--KATDDDYDD 473
D+++ LEG +MGKK K+ + P L + K T +
Sbjct: 354 DIDVEWFNQQLENISLEGERKRTRMGKKLLMKQQKKLIGAVKPWLLKTVQRKVTSE---- 409
Query: 474 GTEEVLNYANYEEYYYSDEDEEWRTN--FFSEFG---------QHKTDYYHYKLDYAKVT 522
L A++E + D+ E R N F EF D Y++KLD +
Sbjct: 410 -----LQDADFEIFPLEDK-ELVRANLDFLKEFAFDLGLILAHSKSKDLYYFKLDLDSIN 463
Query: 523 NEVLRDQAECYI-------------------------------RAIQWNLHYY------- 544
+ ++ E I R ++W YY
Sbjct: 464 VQETDEEHEARIHETRRSIKKYEQGIIIASEEELEEEREIYSERFVEWKDQYYKDKLDFS 523
Query: 545 -------------------------YNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG 579
Y GC SWSWYY +HYAP ISD+ N+++ G
Sbjct: 524 INDTDSLKEMTENYVGGLQWVLYYYYRGCPSWSWYYRYHYAPRISDVIKGIDQNIEFHKG 583
Query: 580 EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVL 639
+PF PFQQL+AVLP SK L+P Y+ LM E+SPIL++YP E DLNGK DWEAVV
Sbjct: 584 QPFKPFQQLMAVLPERSKNLIPVVYRPLMYDEHSPILDFYPNEVELDLNGKTADWEAVVK 643
Query: 640 IPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---NVNLGTALAPDYFPAINE 696
I F+D+ +L++AM + L+ +E+ RN G L++ ++ + T LA F I
Sbjct: 644 ISFVDQKRLVEAMAPYDAKLSPDEKKRNSFGTDLIFIFNPQVDTVYKTPLA-GLFNDIEH 702
Query: 697 NHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQ 755
NH +E+ + + K GL + L + FP+LK + T ++ VF
Sbjct: 703 NHCIEREFIPESM--ENVKFLFGLPKGAKLGASSLAGFPSLKTLPLTAELAYNSSVVFNF 760
Query: 756 PSRNESIII-VQD--KVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDK 812
PS+ +S+++ +QD K SL +A + +GK ++ +P L E ++ ++ T+++ K
Sbjct: 761 PSKQQSMVLHIQDLYKENGISLSDLAKRHMGKIVYSRWPFLRESKLLSLITEETVYEGVK 820
Query: 813 NS--GPVFERAAKDMQ-DAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGP 869
+ V ER +D + F+ K ++ Y + + + L PV
Sbjct: 821 SGKLTKVIERKPQDFERKEFRELKMTLKSNYQRTKAILLDDISALAKVVPVNG----LVR 876
Query: 870 RGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKT---IDEIFYPGCQCFALSNPHYG 926
+ ++F + Y Q V +++ E K I++ F G + L + YG
Sbjct: 877 NSDGSYSKSFNETIEYYPLQLIVEDVKNKDERYIEKEPLPINKEFPKGSKVVFLGDYAYG 936
Query: 927 SGGCVISTVKEENSFIKLSFKVQQ-----EPDLSDLVHLQDDTVYNYLPSYTVASKLSIS 981
+TV NS +L V++ EP++ + D + P+ + +
Sbjct: 937 GE----ATVDGYNSETRLKLTVKKGSLRAEPNIGKVRAKLDSQALRFYPTQVFSKIARVH 992
Query: 982 PLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVT 1041
PL LS+ T + DS + K HN+GL IKF +N++V+G+ R ++ KW Y++ +
Sbjct: 993 PLFLSKITSRYLVNDSKK---KSHNVGLMIKFKARNQKVLGYARC--SSNKWEYSDVALG 1047
Query: 1042 LIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIV----SWLKE--QPHAKA 1095
L++ + FPE F L + I D+FP++ I+ WL E +P
Sbjct: 1048 LLEQFRSTFPEFFAKLSNSKEQAIPSITDLFPNKSSAEADSILKTVADWLSEARKPFVVV 1107
Query: 1096 EVRP-----CGAAVVDAKVVSLIEHAVDTCE-----KVEKQITLFVKPNKLYIPKPTLDK 1145
+ A V+++++ + D+ E KV ++ L + + + +
Sbjct: 1108 SLESDSLTKASMAAVESEIIKYVSLP-DSSEQKKLAKVPREAILNAESSYVLL------- 1159
Query: 1146 LCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI 1205
+F L DRV+ I+D VPL +GT++G + V+FD G
Sbjct: 1160 ----RSQRFHLGDRVMYIQDSGKVPLHSKGTVVGYTS--IGKNVSIQVLFDNEIIAGNNF 1213
Query: 1206 --RCSESRGYRMPAQAMINLS 1224
R RG + + ++NLS
Sbjct: 1214 GGRLQTRRGLGLDSSFLLNLS 1234
Score = 166 bits (421), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 74/129 (57%), Positives = 101/129 (78%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFF +ISER+P +S+++ QIPEFDNLYLDMN I+HNC+H + ++ + R++E+++
Sbjct: 1 MGIPKFFHFISERWPQISQLIDGSQIPEFDNLYLDMNSILHNCTHGDGSEVNSRLSEEEV 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ IF YI+ LF I+PK+ F+MAIDGVAPRAKMNQQR RRFR+A +AE QKA E G+
Sbjct: 61 YSKIFSYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALQKAIENGD 120
Query: 121 RLPTEKRFD 129
LP + FD
Sbjct: 121 ELPKGEPFD 129
>gi|354545919|emb|CCE42648.1| hypothetical protein CPAR2_202910 [Candida parapsilosis]
Length = 1481
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 397/1250 (31%), Positives = 607/1250 (48%), Gaps = 158/1250 (12%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT 185
F++I F PKK F+MAIDGVAPRAKMNQQR RRFR+A EAE+ +KA E G+ LP
Sbjct: 64 FNYIDHLFSIIKPKKTFYMAIDGVAPRAKMNQQRARRFRTAYEAEINLKKAIENGDELPK 123
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPG 245
E FDSN ITPGT FM +L + L+YFV KIT D W + + ++LSGHE PG
Sbjct: 124 EDPFDSNSITPGTEFMAKLTENLKYFVHKKITEDSRWAN---------IEIVLSGHEVPG 174
Query: 246 EGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN 305
EGEHKI ++IR ++S+ DY+PN+RHC+YGLDADLIMLGL +H+P+F+LLREEV F +
Sbjct: 175 EGEHKIQEFIRAVRSQDDYDPNLRHCIYGLDADLIMLGLVSHDPHFALLREEVTFGNRKT 234
Query: 306 KGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIG 365
G + VT + KF+LLHLSL+R+YLELEF +++E + F + E ++DD++L+ ++IG
Sbjct: 235 SSGPKDVT--DQKFYLLHLSLVREYLELEFKEVEEQ--VDFEYDFEKVLDDFILIMYVIG 290
Query: 366 NDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA------ 419
NDF+P+LPDLH+ GA PLL +++ L DGYINE G +NL+R ++ L+
Sbjct: 291 NDFLPHLPDLHLNKGAFPLLLSTFKQSLLQSDGYINEEGKINLRRLNIWVHHLSEFEFEN 350
Query: 420 ----SFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGT 475
D E F +K D+ K KK + ++ K++ + + +
Sbjct: 351 FEEREVDVEWFNKKLDDVSISGEKKRKKIGKLLILKEQKKLVGYIKPWLMEVSSQTVNDL 410
Query: 476 EEVLNYANYEEYYYSDEDEEWRTNFFSEFG---------QHKTDYYHYKLDYAKV----- 521
++ N + ED E +F +F D Y KLD +
Sbjct: 411 IQLANEDKLPTLKLNKEDVEKNLDFLKQFALEAGFLIIHSKSDDSYVAKLDIDGLSPAES 470
Query: 522 -------------------------TNEVLRDQAECYIRAIQ-WNLHYY----------- 544
+ +VL + Y + W +YY
Sbjct: 471 EEDYDERISELRKTVKSYQAANLVESQDVLGETKGVYEEKFKTWKNNYYEEKLHFPIDDK 530
Query: 545 ---------YNGCVSWSWYY------------PHHYAPYISDIKDF------SHLNLKYE 577
Y + W YY +HYAP ISD+ +++ +E
Sbjct: 531 EKLIEMTEHYVEGLQWVLYYYYRGCPSWNFYYKYHYAPRISDVSLGLEELIKKGVDITFE 590
Query: 578 MGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAV 637
+PF PF+QL+AVLPA SK+L+P Y LMT E SPI+++YP E D+NGK WEAV
Sbjct: 591 KSKPFKPFEQLMAVLPARSKKLMPAAYWPLMTDEKSPIIDFYPHEVDIDMNGKTASWEAV 650
Query: 638 VLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTAL---APDYFPAI 694
VL+ F+DE KL+ A+ +E LT +E RN +G + + +N + P +F I
Sbjct: 651 VLLDFVDEKKLLDALKPIESKLTPQETKRNSYGHNIKFI-NNPQIDKVYPSPLPGFFHDI 709
Query: 695 NENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQ 754
+ E ++ V P K+ K L + FPTLK+V FT ++ +VKVF
Sbjct: 710 EHDKCYETEFVLPEV-VEP-KIGK-LAEARTGTDLSAGFPTLKYVPFTSELALNEVKVFN 766
Query: 755 QPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKN 813
S++E++I+ V++ + +Q A GK I+ N+P L E +V V + +N
Sbjct: 767 FSSKSETMILNVENVWSDMTSRQFAQSFAGKLIYSNWPFLRECKVVKVVDGEYNYESVRN 826
Query: 814 SGPVFERAAKDMQDAFQLSKKSIT---DGYYTKL-GVDIGNTEVLVYGQPVESRKYFFGP 869
+ DM + S +S D Y+ K GV +G EVLV+ + V P
Sbjct: 827 TKGFKHVVTTDMDPEEKRSYRSTCNNLDYYWDKTKGVKLGPIEVLVHVKAVNG--LIRNP 884
Query: 870 RGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYK---TIDEIFYPGCQCFALSNPHYG 926
G +T+ + Y Q V ++ + + I+E F Q L + YG
Sbjct: 885 NGAYV--KTYSKDIEVYPLQLIVKDVTHKDQRFATRPPLPIEEEFPVHSQVIFLGDLGYG 942
Query: 927 SGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLS 986
+ V+ ++ S EP++ + NY+PS+ V+ KL+I+PLLLS
Sbjct: 943 APAQVVGYSGDKLSIRVSKISSTAEPNIGKRRQSIEAKQINYVPSFDVSKKLAINPLLLS 1002
Query: 987 RFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNY 1046
+ T S I D G K+ NIGL +KF K ++V+G+T++ K W ++ + LI++Y
Sbjct: 1003 KITSSYMIQD----GNKKINIGLELKFQSKRQKVLGYTKQSANGKFWEFSPLAINLIQSY 1058
Query: 1047 MKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVD 1106
++FP++F L DI DV + ++ WLKE KA++ P V
Sbjct: 1059 RQKFPKLFAKLSQLKGSDIPNLKDV---SDADEIQEVKKWLKE---VKADLIP-----VS 1107
Query: 1107 AKVVSLIEHAVDTCEKVEKQITL----FVKPNKLYIPKPTLDKLCPD----PDTKFKLFD 1158
+ S + + E+ + L + + +P+ + D KF+L D
Sbjct: 1108 LESQSFTKFSFGAIEQYMENYILTQVPMINKDIRGVPRNAILNASESYQLLSDQKFELGD 1167
Query: 1159 RVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMP 1216
RV ++D VP +GT++ I+ V+FD P G + + +RG +
Sbjct: 1168 RVEYVQDFGKVPKMSKGTVVSIIT--VGSKTSLGVIFDVPQLSGNNMNGKLQSNRGLLLD 1225
Query: 1217 AQAMINLS-----YGERLCGNSNPHVKNINVMQSRGERNTNYAQVTRQPQ 1261
+ ++NL+ Y R P + V + + + A+ T +PQ
Sbjct: 1226 SSLVLNLTNRQFVYHSRASKQRKPMTEEEKVARIKASQ----AKKTHKPQ 1271
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFR+ISER+P +S++V E QIPEFDNLYLDMN I+H C+H ND RI++ Q+
Sbjct: 1 MGIPKFFRFISERWPLISQLVDEKQIPEFDNLYLDMNSILHTCTHSNDGSIT-RISDDQM 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ IF+YI+ LF +I+PKK F+MAIDGVAPRAKMNQQR RRFR+A EAE+ +KA E G+
Sbjct: 60 YAAIFNYIDHLFSIIKPKKTFYMAIDGVAPRAKMNQQRARRFRTAYEAEINLKKAIENGD 119
Query: 121 RLPTEKRFD 129
LP E FD
Sbjct: 120 ELPKEDPFD 128
>gi|308805328|ref|XP_003079976.1| 5'-3' exoribonuclease 1 (ISS) [Ostreococcus tauri]
gi|116058433|emb|CAL53622.1| 5'-3' exoribonuclease 1 (ISS) [Ostreococcus tauri]
Length = 1418
Score = 538 bits (1386), Expect = e-149, Method: Compositional matrix adjust.
Identities = 384/1197 (32%), Positives = 585/1197 (48%), Gaps = 121/1197 (10%)
Query: 133 LKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSN 192
+ P KL +MAIDGVAPRAKMNQQR RRFRSA EA ++A+ +GE P + FDSN
Sbjct: 145 FRMTRPNKLLYMAIDGVAPRAKMNQQRSRRFRSASEAAKDREEARRRGEPEPEGEPFDSN 204
Query: 193 CITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIM 252
CITPGT FM RL + L+++V+ K T D L W V VILSGHE GEGEHKIM
Sbjct: 205 CITPGTEFMARLTEHLKFYVRKKQTEDPL---------WAKVTVILSGHEVRGEGEHKIM 255
Query: 253 DYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ-- 310
++IR+ +++P + PN HCLYGLDADLIML L THEP+F LLRE VKF S+
Sbjct: 256 EHIRWARTQPGWEPNQTHCLYGLDADLIMLALVTHEPHFCLLREVVKFGGGEKGQPSREI 315
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ P + F LLH+ L+R+YL+LEF + LSF + +E +IDD++L+ L+GNDF+P
Sbjct: 316 LSNPTDDGFILLHIGLLREYLDLEFREKN----LSFGYDLERVIDDFILLCMLVGNDFLP 371
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYIN---EGGYLNLKRFEKFLTKLASFDFEQFR 427
LP L+I GAL L+KVY + LP L GYI GG N +R EK ++ +++F+ +
Sbjct: 372 ALPTLNIAEGALNTLFKVYHDTLPMLGGYITGDEGGGTFNAERLEKIMSIMSTFERQVLE 431
Query: 428 EKYADIQYLEGKMG---KKFSDVFHKEKSKE--MDPDLAALIKATDDDYDDGTEEV---- 478
++ D++ E K K+F D E + E D D++ + + DGT +V
Sbjct: 432 DRALDVEKEEEKKARRNKRFGDGSASELNVEEKFDKDMSEMSET------DGTPQVSSDP 485
Query: 479 --LNYANYEEYYYSDED--EEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYI 534
+N A E+ + W K YY KL L + + Y
Sbjct: 486 VMMNAAKRAMILEGGEEGLQAW-----------KDQYYREKLGLKMGEAAPLAEIRQAYF 534
Query: 535 RAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI-KDFSHLNLKYEMGEPFLPFQQLLAVLP 593
+ W L YYY G SW+WYYP+HYAP SD+ L +++ GEPF PF+QL+AV P
Sbjct: 535 DGLNWVLRYYYRGVASWTWYYPYHYAPMASDLCAGMEKLTSEFDYGEPFRPFEQLMAVQP 594
Query: 594 AASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMD 653
+S +LLPEP+++ M SP+ E++PE+ D GK+ DWE VVL+PF+D +L A+
Sbjct: 595 PSSSKLLPEPFRHFMEDPRSPLAEFFPEDIPVDFEGKRNDWEGVVLLPFLDADRLKAAVA 654
Query: 654 AVE-HLLTDEERSRNRHGPMLVYTYSNVNLGTALA------PDYFPAINENHAVEKPL-Y 705
+VE LT E +RN+ G ++ + ++ G + FPA ++ P +
Sbjct: 655 SVEDSQLTAGEIARNKPGHLIFFNHAPGGAGDVQSTLPKSFAGLFPAKSKMTMRMPPGEF 714
Query: 706 RDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIV 765
DD+ + + L + FPT++ + + ++NA VKVF S+ ES++I
Sbjct: 715 PDDVKCFAGEDSVFPGTKIGLD-SPSGFPTVRTLPVSGALKNAGVKVFGNASKKESLVIQ 773
Query: 766 QDKVQ--------VPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPV 817
D V +A +L K + I +P+L E V V+ RI G
Sbjct: 774 IDGVDKELVGDLTGSGASDIAAVLLNKRVQIKWPYLQEALVVGVSDAKERIV--PVPGKP 831
Query: 818 FERAAK-DMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQ 876
+ A+K + + + +T Y K GV G + V ++ + E P G + Q
Sbjct: 832 NDFASKPNNSSEWGAEMQKVTSEYLAKYGVAAGRSNVALHCRACEG--LVRHPDGSL--Q 887
Query: 877 RTFIRS------TVTYAYQSAVLNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGC 930
+ F ++ + A +A + + R +L+ F G L ++G+
Sbjct: 888 KRFAKTEMMVPIQLVIAKHNAPSSRMEERPALDAGEAAGDFQEGDVALYLGRSYFGALAV 947
Query: 931 VISTVKEENSFIKLSFKVQQEP-DLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFT 989
V S L + P D + + Y+ +A KL + P ++ T
Sbjct: 948 VTDV-----SPSGLGVSLHPVPLDTGVSRRILNGVGQRYMSGGEIARKLGVHPKVIGCIT 1002
Query: 990 GSIFIIDSTEE-GAKRHNIGLNIKFSRKNEEVVGFTRRDETTK-KWFYTEQVVTLIKNYM 1047
G+++ ++ + ++R +IGLN+K + K V GF R + K W Y+++ + +++ Y
Sbjct: 1003 GAVWAQENAKAPRSERIDIGLNLKHNGKMLCVAGFCRPTQGDKPGWEYSQEALRVLQEYK 1062
Query: 1048 KQFPEVFGFLKDHSSDDIYLRDDV--------FPHQGEQRVAQI---VSWLKEQPHAKAE 1096
+ VF ++D DD +RD V P G R+A + +WLK P A+
Sbjct: 1063 RAHAWVFAAVED--IDD--MRDGVNIEDVLADLPESG--RLATLKGTKAWLKAHPIARRP 1116
Query: 1097 VRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITL-FVKPNKLYIPKPTLDKLCPD--PDTK 1153
+ P + V + V + K K + L V P L + K + D
Sbjct: 1117 LVPTSSQVATEEAVRALVATTAGGTKAAKVVDLEGVSP--LLLMKAVTEGSVVDLYAGGD 1174
Query: 1154 FKLFDRVVNIRDCYTVPLGYRGTIIGI-----VQGETSYDAMYDVVFDKPFPHGVKIR-- 1206
F+L DRVV + D G RG I+ I + S +V+FD+ F G +
Sbjct: 1175 FELGDRVVMVGDSGQPSFGSRGAIVAIHSYTDAHTQDSRAESVEVLFDEDFVGGTDLHGV 1234
Query: 1207 CSESRGYRMPAQAMINLSYGERL--CGNSNPHVKNINVMQSRGERNTNYAQVTRQPQ 1261
S RG +P +INLS+ + G++ P + V ++G+ N R P+
Sbjct: 1235 ISSKRGAMLPVAQLINLSHPPAMPNLGSAAP---KLVVKDAKGDLNAPTQWSERAPK 1288
Score = 164 bits (415), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/145 (53%), Positives = 99/145 (68%), Gaps = 4/145 (2%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR+++ERYP L + + QIP+ DNLYLDMNG+IHNCSH D + R++E ++
Sbjct: 74 MGVPKFFRWLAERYPLLQQEIAGSQIPKIDNLYLDMNGVIHNCSHGAGTDVNTRMSEDEM 133
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+F Y++ LFRM +P KL +MAIDGVAPRAKMNQQR RRFRSA EA ++A+ +GE
Sbjct: 134 MSKVFAYLDHLFRMTRPNKLLYMAIDGVAPRAKMNQQRSRRFRSASEAAKDREEARRRGE 193
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMA 145
P + FD C FMA
Sbjct: 194 PEPEGEPFD----SNCITPGTEFMA 214
>gi|7509723|pir||T26774 hypothetical protein Y39G8C.b - Caenorhabditis elegans
Length = 1801
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 345/1081 (31%), Positives = 540/1081 (49%), Gaps = 188/1081 (17%)
Query: 243 TPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNT 302
PGEGEHKIMD+IR ++ Y+PN RHC+YGLDADLIMLG+ +HEP+FSLLREEV FNT
Sbjct: 269 VPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLREEVTFNT 328
Query: 303 KSNKGGSQIVT-PEET-----KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDD 356
+ K ++ P+ T KF LLHLSL+R+YL EF +K+ L F + +E I+DD
Sbjct: 329 RPRKNDNKATKKPKRTDSDVKKFHLLHLSLLREYLAWEFADVKDS--LPFEYEMERIVDD 386
Query: 357 WVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLT 416
W+L+G L+GNDF+P+LP++HI + ALPLLY Y++VLPTLDGYINE GYLNL RFE FL
Sbjct: 387 WILLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFEAFLA 446
Query: 417 KLASFDFEQFREKYADIQYLEGK-----------------MGKKFSDV---FHKEKSK-- 454
+LA D F E+ D Q++E K + + SDV E+SK
Sbjct: 447 ELALNDKTSFMERLEDEQFMESKRIRVVDPEQQELAEPELVAFESSDVEDEAGAEESKDE 506
Query: 455 ------EMDPDLAALIKATDDDYDD-----GTEEVLNYANYEEYYYSDE----------- 492
E D D AA + ++D DD G++E+L +N + DE
Sbjct: 507 AGGAGAEDDEDDAAFVSDHEEDGDDLEPGSGSDELL-LSNLDAQLLEDEFNDELATLALS 565
Query: 493 ---------DEE--WRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNL 541
D E W ++F +HK YY KL Y ++ + LR+QAE Y+RAIQWNL
Sbjct: 566 GMNDADFANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYVRAIQWNL 625
Query: 542 HYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLP 601
HYYY+GCVSWSW+YPHHYAP+ISD++ F + +++E+ EPF PF+QLLAVLP AS + LP
Sbjct: 626 HYYYHGCVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPEASADCLP 685
Query: 602 EPYQNLMTLE--NSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLL 659
P + LM+ + SPI ++YP F TDLNGK+ +WEAVVLIPFI+E +L++A++A L
Sbjct: 686 RPLRELMSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAKRSRL 745
Query: 660 TDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKG 719
T EE +RN HG + S P+ + + V + +D + ++++ G
Sbjct: 746 TSEENARNSHGSHIQCISS---------PEPPNSQGQWRTVRSEIPQDSFRIPRSQVKWG 796
Query: 720 LCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNE------------------- 760
L +V + +Y FPT+KH+ ++ A +F SR E
Sbjct: 797 LLPNVKMDVYFPGFPTMKHLSHLGELRFANCNIFGMASRKESMVLKVSSRRFFFCRFAGN 856
Query: 761 ---------------------SIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQ 799
++ IV+++ + ++ ++ + + I++P L ++
Sbjct: 857 FPANCRFVDLPELLLFSANRQTVGIVENERAHTDIIELGSELCDEEVCIDWPILKVAKID 916
Query: 800 AVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQP 859
++ D +I + + + +++ + +Q +T+ T+ ++I Q
Sbjct: 917 SIWGGDDKIVRKCDDEIIVKDMSEEEKRQWQAHANQLTEHLMTRFAIEIA-------AQK 969
Query: 860 VESRKYFFGPRGKVTQQRTFIRSTVTYAYQS-----AVLNL-------QQARESLEYKTI 907
K+ R V R F + + Y Q +VL QQ L +
Sbjct: 970 DSKGKHI---RPAVAWVRKF--TGLVYEAQGGGKEPSVLKACKQWSSPQQLMPVLLPLVV 1024
Query: 908 DEIF---------------YPGCQCFALSNPHY---GSGGCVISTVKEENSFIKL---SF 946
++ YP +++P + G G V E+++ ++
Sbjct: 1025 KDVLLENSRVLADLPMKQAYPKQSIVWITDPKFALFGMPGMVNGFSNEKSADCRIEVIGM 1084
Query: 947 KVQQEPD-LSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRH 1005
Q + D + L + ++ Y A + + L +R TG++F+ + E ++
Sbjct: 1085 STQNKVDKMEALRKKMEQKSLRWMGGYDCARQCQVDTRLFARITGTMFLWNEPRERVEKG 1144
Query: 1006 ----------NIGLNIKFSRKNEEVVGFTRRDE-------TTKKWFYTEQVVTLIKNYMK 1048
N GL +K+SR++ V +T R E T K WFYT L+ Y +
Sbjct: 1145 QQISSSDSKINCGLALKYSRRDLCVADYTDRTEHTNQRGVTNKVWFYTNLATRLVSEYRR 1204
Query: 1049 QFPEVFGFLKD---HSSDDIYLRDDVFPHQG--EQRVAQIVSWLKEQPHAKAEVRPCGAA 1103
+FP+V+ +L+ DD+Y +D++ ++ E+R ++ +L P +AE CG
Sbjct: 1205 KFPDVWKYLETIGLTQQDDVYYTEDIWSNEKTREKRFGELSEFLGGLPSLEAEQLKCGTV 1264
Query: 1104 VVDAKVVSLIEHAVDTCEKVEKQITL---FVKPNKLYIPKPTLDKLCPDPDTKFKLFDRV 1160
D ++++ IE + E EK+ + + P L+ + K+ DP F++ DRV
Sbjct: 1265 YADRQLITEIEMIL--AEPDEKKPVMNKYMMAPGALFRYELYNGKVHADPAADFQILDRV 1322
Query: 1161 V 1161
Sbjct: 1323 A 1323
Score = 192 bits (489), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/143 (64%), Positives = 107/143 (74%), Gaps = 14/143 (9%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ SERYPCLSEV+ E QIPEFDNLYLDMNGIIHNCSHPND+D FRITE +I
Sbjct: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFR--------------SAK 106
F +IF YIE L+ +I+P+K+FFMA+DGVAPRAKMNQQR RRF SA+
Sbjct: 61 FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFMYVEELLLAGKKEIWSAR 120
Query: 107 EAEVLEQKAKEKGERLPTEKRFD 129
A KA E GE +P+E RFD
Sbjct: 121 TAHTQLAKALENGEIMPSEARFD 143
Score = 112 bits (280), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 72/124 (58%), Gaps = 23/124 (18%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFR--------------SAKEAEVLEQKAKEKGERL 183
P+K+FFMA+DGVAPRAKMNQQR RRF SA+ A KA E GE +
Sbjct: 77 PQKVFFMAVDGVAPRAKMNQQRARRFMYVEELLLAGKKEIWSARTAHTQLAKALENGEIM 136
Query: 184 PTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHET 243
P+E RFDSNCITPGT FM RLHQ+L ++K K TD W+ +ILSGH
Sbjct: 137 PSEARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRK---------IILSGHNQ 187
Query: 244 PGEG 247
G
Sbjct: 188 KKSG 191
Score = 47.4 bits (111), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Query: 1169 VPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCS-ESRGYRMPAQAMINLSYG 1226
VP +GT++GI +D DV FDKPF G K+R S E+ R+P A++N+++G
Sbjct: 1406 VPKTTQGTVVGI------HDDKIDVFFDKPFDGGQKVRGSNEAAAIRVPQSALLNVTFG 1458
>gi|412993039|emb|CCO16572.1| 5'-3' exoribonuclease [Bathycoccus prasinos]
Length = 1513
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 402/1271 (31%), Positives = 610/1271 (47%), Gaps = 159/1271 (12%)
Query: 134 KFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNC 193
+ PKKL +MAIDGVAPRAKMNQQR RRFRSAKEAE + +A KGE + FDSNC
Sbjct: 38 RMVRPKKLLYMAIDGVAPRAKMNQQRSRRFRSAKEAEEAKAEALAKGEPEAQGEPFDSNC 97
Query: 194 ITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMD 253
ITPGT FM RL + L+++V+ K T D W++V VILSGHE GEGEHKIM+
Sbjct: 98 ITPGTEFMARLTEHLKFYVRKKQTEDV---------AWRNVKVILSGHEVRGEGEHKIME 148
Query: 254 YIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVT 313
YIR+ + KPDY+ NM HCLYGLDADLIML L THEP+F LLRE VKF S+ +
Sbjct: 149 YIRWERLKPDYDANMSHCLYGLDADLIMLALVTHEPHFCLLREVVKFGGGERGQPSREIL 208
Query: 314 --PEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPN 371
P + F +L + L+R+YL+LEF + + G F + +E +IDD V + L+GNDF+P
Sbjct: 209 ERPSDDGFLMLQVGLLREYLDLEFQRSVK-GACGFAYDVERVIDDIVFLCMLVGNDFLPP 267
Query: 372 LPDLHIINGALPLLYKVYQEVLPTLDGYIN---EGGYLNLKRFEKFLTKLASFDFEQFRE 428
LP L I GAL L+ Y+++LP+L GYI+ GG N R EK LT++A F+ + +
Sbjct: 268 LPTLDIAEGALNTLFDTYRDMLPSLGGYISGDEGGGTFNAPRLEKILTRMAGFERDVLEQ 327
Query: 429 KYADIQYLEGKMGKK----------------FSDVFHKEKSKEMDPDLAALIKATDDDYD 472
+ D+Q + K K+ F+D+ E+ + A L+KA ++
Sbjct: 328 RAMDVQEFDEKQAKRNNKNGKRNGHPSDSESFTDLTAMEQFE------AELLKAKEEGKP 381
Query: 473 DGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAEC 532
+ T +++ A D Q+K YY KL+ + + +
Sbjct: 382 EPT--MMSVAKRNAILEGGAD---------GLQQYKDMYYREKLELKVGEKAPVDELRQA 430
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI-KDFSHLNLKYEMGEPFLPFQQLLAV 591
Y + W L YYY G SW+WYYP+HYAP SD+ L +K+ G PF PF+QL+AV
Sbjct: 431 YFEGLNWVLRYYYRGVASWTWYYPYHYAPMASDLCAGLGQLTVKFNYGRPFYPFEQLMAV 490
Query: 592 LPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKA 651
P AS LLPE +++ MT E+SP+ ++P+E D GK+ WE VVL+PF+DE L A
Sbjct: 491 QPPASSHLLPELFRHFMTEESSPLKPFFPDEIKIDFEGKRNSWEGVVLLPFLDEKVLKDA 550
Query: 652 MDAV-EHLLTDEERSRNRHGPMLVYTYS-------NVNLGTALAPDYFPAINENHAVEKP 703
+ +V + LTD + RN G +V+ N + A FPA ++ + P
Sbjct: 551 IASVSKEKLTDAQNKRNAPGECIVFERDENCTDAVNSTVPKTFA-GLFPAKSKMTYEQPP 609
Query: 704 L-YRDDIYV--HPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHK-IENAKVKVFQQPSRN 759
+ DD N L GL + + Y +PT K V+ +++AK VFQ +R
Sbjct: 610 GEFPDDAKCLGGKNPLLPGLKIE-TIADYPRGYPTFKTVEIVRGDLKHAKCVVFQTATRK 668
Query: 760 ESIII----------------VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVAT 803
ES+I+ V DK + + VA L + +++ +P+L E V+
Sbjct: 669 ESLIVKIGKGSEDFIGKALPNVADKSVGLTAEAVAKTYLNERVYVKWPYLKESLCVGVSD 728
Query: 804 KDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKL---GVDIGNTEVLVYGQPV 860
+ + GP AK D+ Q +T+G + GVD NT++ ++ +
Sbjct: 729 QKCKYVV----GPGQTTVAKP-HDSAQW-HADVTNGSNELMRTQGVDCANTKIALHVRSC 782
Query: 861 ESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVL------NLQQARESLEYKTIDEI---F 911
E P G T Q+ F ++ V Q + + +A + L D++ +
Sbjct: 783 EG--LVRHPDG--TLQKRFSKTEVVVPMQLCLAAHPRDKSEAEAAKDLGVSEDDDMKVTW 838
Query: 912 YPGCQCFALSNPHYGSGGCVIST-VKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLP 970
G + L H+GS V+S +K N F+ + EP V L L
Sbjct: 839 REGDEALFLGRSHFGSHVKVVSKDLKSGNLFVDV------EP-----VRLDTGVGRRILQ 887
Query: 971 SYT--------VASKLSISPLLLSRFTGSIFIIDSTEEGA-KRHNIGLNIKFSRKNEEVV 1021
Y +A KL I P ++ + T +++ + + G +R ++GLN++ S ++ V
Sbjct: 888 GYASRFESAGQIARKLGIDPRVMGQITSAVWTRLTKDAGKNERVDVGLNLRKSSEDLCVA 947
Query: 1022 GFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDD---IYLRDDVFPHQ--- 1075
GF+R+ E K W Y+ LI Y K P VF L++ + D + ++F
Sbjct: 948 GFSRKGE--KGWEYSVDAQRLISEYKKHHPWVFEALRNEAGSDNGGVITMSELFETHDLD 1005
Query: 1076 -GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQIT------ 1128
+ VA+ WLK QP ++ + P + V + V + + KQ
Sbjct: 1006 TNKHLVAEAKKWLKSQPASRRPLVPSDSVVAAEEAVRALAATIGDQSANYKQPMPVALEG 1065
Query: 1129 ----LFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGE 1184
L +KP IP +D F+L DRV + + T P RGT++ I G
Sbjct: 1066 VSPLLLMKP---VIPGEVMDLYA---GGDFELGDRVAYVGESGTPPFCSRGTVVAI-HGY 1118
Query: 1185 TSYDAMY------DVVFDKPFPHGVKIRCS--ESRGYRMPAQAMINLSYGERL--CGNSN 1234
T + +++FD F G +R + + RG + +++NLS+ + G +
Sbjct: 1119 TDAHTTHMVAEHVEIMFDGTFVGGSDLRGALPDCRGAMIAVSSVVNLSHPPAMPSLGKAA 1178
Query: 1235 PH-VKNINVMQSRGERNTNYAQVTRQPQRTTFYKENAPLVNSNLQVTSPYHVKVSRCNSQ 1293
P VK + + N N+ + ++ + P+ +N Q T P S+ +
Sbjct: 1179 PDVVKKVENISLEDVMNLNWKGGSENVKKQAEKPKPVPVAVANRQPTLPGEKGFSKSAGR 1238
Query: 1294 QSSVSQSPSST 1304
V + +ST
Sbjct: 1239 GRGVLAASNST 1249
Score = 103 bits (257), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 56/69 (81%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MNG+IHNCSH D + R+TE+++ +F Y++ ++RM++PKKL +MAIDGVAPRAKMN
Sbjct: 1 MNGVIHNCSHGAGTDTNTRMTEEEMMAKVFAYLDHIYRMVRPKKLLYMAIDGVAPRAKMN 60
Query: 96 QQRGRRFRS 104
QQR RRFRS
Sbjct: 61 QQRSRRFRS 69
>gi|322812519|pdb|3PIE|A Chain A, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812520|pdb|3PIE|B Chain B, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812521|pdb|3PIE|C Chain C, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812522|pdb|3PIE|D Chain D, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812523|pdb|3PIF|A Chain A, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812524|pdb|3PIF|B Chain B, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812525|pdb|3PIF|C Chain C, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812526|pdb|3PIF|D Chain D, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
Length = 1155
Score = 501 bits (1291), Expect = e-138, Method: Compositional matrix adjust.
Identities = 297/738 (40%), Positives = 425/738 (57%), Gaps = 89/738 (12%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK+ F+MAIDGVAPRAKMNQQR RRFR+A +AE QKA E G+ LP + FDSN ITPG
Sbjct: 77 PKQTFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALQKAIENGDELPKGEPFDSNAITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L + L+YF+ KIT D W++ V VI SGHE PGEG+HKIMDYIR
Sbjct: 137 TEFMAKLTENLKYFIHDKITNDTRWQN---------VKVIFSGHEVPGEGQHKIMDYIRA 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
++++ DYNPN RHC+YGLDADLI+LGL TH+ +F LLREEV F +S S + T E
Sbjct: 188 IRAQEDYNPNTRHCIYGLDADLIILGLSTHDHHFCLLREEVTFGKRS----SSVKTLETQ 243
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
FFLLHLS++R+YL LEF ++ + + F + E ++DD++ + F IGNDF+PNLPDLH+
Sbjct: 244 NFFLLHLSILREYLALEFEEITDS--VQFEYDFERVLDDFIFVLFTIGNDFLPNLPDLHL 301
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQY-- 435
GA P+L + ++E L +DGYINE G +NL RF +L L+ F++ F +K D+++
Sbjct: 302 KKGAFPVLLQTFKEALQHMDGYINEQGKINLARFSIWLKYLSDFEYLNFEKKDIDVEWFN 361
Query: 436 -------LEG-----KMGKK-----------------FSDVFHKEKSKEMDPDLAA---- 462
LEG +MGKK V K S+ D D
Sbjct: 362 QQLENISLEGERKRTRMGKKLLMKQQKKLIGAVKPWLLKTVQRKVTSELQDADFEIFPLE 421
Query: 463 ---LIKATDD-----DYDDGTEEVLNYANYEEYYYSDEDEE------------------W 496
L++A D +D G +L ++ ++ YY D +
Sbjct: 422 DKELVRANLDFLKEFAFDLGL--ILAHSKSKDLYYFKLDLDSINXXXXXXXXXXXXXXXX 479
Query: 497 RTNFFSE-FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYY 555
+SE F + K YY KLD++ + L++ E Y+ +QW L+YYY GC SWSWYY
Sbjct: 480 XXXIYSERFVEWKDQYYKDKLDFSINDTDSLKEMTENYVGGLQWVLYYYYRGCPSWSWYY 539
Query: 556 PHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPI 615
+HYAP ISD+ N+++ G+PF PFQQL+AVLP SK L+P Y+ LM E+SPI
Sbjct: 540 RYHYAPRISDVIKGIDQNIEFHKGQPFKPFQQLMAVLPERSKNLIPVVYRPLMYDEHSPI 599
Query: 616 LEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
L++YP E DLNGK DWEAVV I F+D+ +L++AM + L+ +E+ RN G L++
Sbjct: 600 LDFYPNEVELDLNGKTADWEAVVKISFVDQKRLVEAMAPYDAKLSPDEKKRNSFGTDLIF 659
Query: 676 TYS---NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVT 731
++ + T LA F I NH +E+ + + K GL + L +
Sbjct: 660 IFNPQVDTVYKTPLA-GLFNDIEHNHCIEREFIPESM--ENVKFLFGLPKGAKLGASSLA 716
Query: 732 HFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQD--KVQVPSLKQVADQILGKTIFI 788
FP+LK + T ++ VF PS+ +S+++ +QD K SL +A + +GK ++
Sbjct: 717 GFPSLKTLPLTAELAYNSSVVFNFPSKQQSMVLHIQDLYKENGISLSDLAKRHMGKIVYS 776
Query: 789 NYPHLIEIRVQAVATKDS 806
+P L E ++ ++ T+++
Sbjct: 777 RWPFLRESKLLSLITEET 794
Score = 166 bits (421), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/129 (57%), Positives = 101/129 (78%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFF +ISER+P +S+++ QIPEFDNLYLDMN I+HNC+H + ++ + R++E+++
Sbjct: 1 MGIPKFFHFISERWPQISQLIDGSQIPEFDNLYLDMNSILHNCTHGDGSEVNSRLSEEEV 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ IF YI+ LF I+PK+ F+MAIDGVAPRAKMNQQR RRFR+A +AE QKA E G+
Sbjct: 61 YSKIFSYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALQKAIENGD 120
Query: 121 RLPTEKRFD 129
LP + FD
Sbjct: 121 ELPKGEPFD 129
>gi|261329673|emb|CBH12655.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei gambiense
DAL972]
Length = 1418
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 395/1318 (29%), Positives = 595/1318 (45%), Gaps = 255/1318 (19%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDP-HFRITEKQ 59
MGVPKFFR+++ERYP + R++ P DNLYLDMNGIIHNC+HPND D H TEK
Sbjct: 1 MGVPKFFRWVAERYPSVITPFRDFP-PPVDNLYLDMNGIIHNCTHPNDADATHKAPTEKA 59
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ +E +F +
Sbjct: 60 M-------VEAMFSYL-------------------------------------------- 68
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 179
EK F+ I P+K FF+A+DGVAPRAKMNQQR RR+RS E V ++A +
Sbjct: 69 -----EKLFNAIQ-----PRKCFFLAVDGVAPRAKMNQQRQRRYRSGYEMMVAREEALSR 118
Query: 180 GERLPTEKR-FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
GE LP E FDSNCITPGT FM R+ + +YF+ +K++TD W++ VI
Sbjct: 119 GEELPEEADVFDSNCITPGTDFMVRISEHFQYFIMMKMSTDP---------AWQNCSVIY 169
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGH+ PGEGEHKI+++IR K +PDY PN HC+YGLDADL+ML L THEP+F LLRE V
Sbjct: 170 SGHDHPGEGEHKIVEFIRRRKMQPDYGPNETHCMYGLDADLVMLALATHEPHFVLLREVV 229
Query: 299 --KFNTKSNKGGSQ--------IVT------PEETKFFLLHLSLMRDYLELEFGKLKEPG 342
F +S + Q IV P+E F L H++++RDYL+LE + +
Sbjct: 230 TFGFGQESRRAREQREQDESDGIVADKSYQKPDE--FVLFHVNVLRDYLDLEV-RERLGD 286
Query: 343 VLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINE 402
L + +E ++DD+VLM F IGNDF+P++P L I +G+L + +Y + + Y+ +
Sbjct: 287 KLPTNYDLERVVDDFVLMCFFIGNDFLPSIPTLGIHDGSLVQMLDLYAQRVLLAHTYLTD 346
Query: 403 GGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAA 462
G ++ + E +L LA +F + + A Q + +M ++ + H+ AA
Sbjct: 347 MGRIDWRAVEGWLQGLADLEFTTIKAREAQEQEYQRRMAQQCGE--HR----------AA 394
Query: 463 LIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVT 522
I T V + Y++ YY D+ + F + D +L
Sbjct: 395 TIS---------TSTVESLREYKDRYYRDKHQ-----FAMGWDPQGEDMAKLRLH----- 435
Query: 523 NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLN--LKYEMGE 580
YI I W + YYY G SW WY+PHHYAP SD+ + + +K++ G+
Sbjct: 436 ----------YIEGIMWVIGYYYQGPPSWKWYFPHHYAPMASDLVNLPAVAACVKFDPGK 485
Query: 581 PFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLI 640
PFLP QQLLAVLP S +P Y L+ +NSP+ Y+PE+ D G + WE VVLI
Sbjct: 486 PFLPHQQLLAVLPPMSYRSMPRAYWPLLRSKNSPLARYFPEKLQIDREGTRAPWEGVVLI 545
Query: 641 PFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAV 700
PFI+E L+ A + V+ +T EER NR G +Y Y + F +
Sbjct: 546 PFIEERTLLAAYETVQDRVTPEERENNRLGLPTLYAYDPTIEAYEVPNSLFGPL------ 599
Query: 701 EKPLYRDDIYVHP--NKLRKGLCQDV-NLKLYVTHFPTL--KHVQFTHKIENAKVKVFQQ 755
+ R D + P K LC V + F TL K T + E+ V +F
Sbjct: 600 RRTTVRRDAFDFPPLTKFIPRLCTGVCTGEQQFEGFTTLRSKWRYITPQRESGVVTIFGM 659
Query: 756 PSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKN- 813
P+R ES+++ ++D + +VA ++G+ + + +PH RV AV+ K IS + N
Sbjct: 660 PARGESLLLGLKDSFNAIAAHEVA-TLVGQEVLVGFPHYRRARVVAVSDKRVHISANINL 718
Query: 814 ----SGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGP 869
G +D ++ KLG+ + N VLVY F G
Sbjct: 719 EGVSCGANVRELNRDASMNIAKELETHRQCMREKLGMSVSNLTVLVY------VNLFTGM 772
Query: 870 R----GKVTQQRTFIRSTVTYAYQSAVLNLQQA----------RESLEY--KTIDEIFYP 913
R G+V R F + YA V LQ R+ +E+ + +
Sbjct: 773 RMTRKGRVV--RNFSKDQTCYAL-PLVARLQDVKLTEDSRYVERDRVEWDNRFGSRVILV 829
Query: 914 GCQCFALSNPH---YGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLP 970
G + ++ YGS G V+ + + ++ +V Q+P V L + N++
Sbjct: 830 GAEPKSMKGKDQQLYGSSGVVVRSSPDAEGTFTVAARVFQKPVSIPHVLLDYASSRNWVS 889
Query: 971 SYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRD-ET 1029
V++++ + PL L GS+ S + G + IGL + ++R N +G+ ++
Sbjct: 890 MPDVSNEVRVGPLALKHLVGSVRT--SPQYGCR--EIGLGLIYTRNNLVRIGYAKQTVRG 945
Query: 1030 TKKW----------------------------------------------------FYTE 1037
K W +++
Sbjct: 946 GKAWGAPGGRLGAGLANSDDAFGRPVQDAAPAGHYLESLQKGESRPRSSRPMQYMTWFSR 1005
Query: 1038 QVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVF--PHQGEQRVAQIVSWLKE-QPHAK 1094
+ V LIK Y+++F + L+ +S L F + V ++ ++E
Sbjct: 1006 KAVVLIKTYVERFKPLVDRLESIASSPQALDPPQFMTGEWADNDVDDVLRSIEEFIESCG 1065
Query: 1095 AEVRPCGAAVVDA---KVVSLIEHAVD--TCEKVEKQITLFVKPNKLYIP-----KPTLD 1144
+ P AA DA + V ++E +D +E +I V LY P +
Sbjct: 1066 IQSVPLVAAQDDAFPREHVRMLEEELDRQGPRPLEDRILSSVARRCLYFPVTRCAGGHIS 1125
Query: 1145 KLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHG 1202
+L + L RVVN R C P G GT++ ++ T +DA +VV+D PF G
Sbjct: 1126 QLPLPQEQTVHLGSRVVNCRACGAAPFGATGTVVRLL--STGHDA--EVVYDDPFVGG 1179
>gi|72391638|ref|XP_846113.1| 5'-3' exonuclease XRNA [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175631|gb|AAX69763.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei]
gi|70802649|gb|AAZ12554.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1418
Score = 485 bits (1248), Expect = e-133, Method: Compositional matrix adjust.
Identities = 348/1084 (32%), Positives = 516/1084 (47%), Gaps = 186/1084 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDP-HFRITEKQ 59
MGVPKFFR+++ERYP + R++ P DNLYLDMNGIIHNC+HPND D H TEK
Sbjct: 1 MGVPKFFRWVAERYPSVITPFRDFP-PPVDNLYLDMNGIIHNCTHPNDADATHKAPTEKA 59
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ +E +F +
Sbjct: 60 M-------VEAMFSYL-------------------------------------------- 68
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 179
EK F+ I P+K FF+A+DGVAPRAKMNQQR RR+RS E V ++A +
Sbjct: 69 -----EKLFNAIQ-----PRKCFFLAVDGVAPRAKMNQQRQRRYRSGYEMMVAREEALSR 118
Query: 180 GERLPTEKR-FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
GE LP E FDSNCITPGT FM R+ + +YF+ +K++TD W++ VI
Sbjct: 119 GEELPEEADVFDSNCITPGTDFMVRISEHFQYFIMMKMSTDP---------AWQNCSVIY 169
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGH+ PGEGEHKI+++IR K +PDY PN HC+YGLDADL+ML L THEP+F LLRE V
Sbjct: 170 SGHDHPGEGEHKIVEFIRRRKMQPDYGPNETHCMYGLDADLVMLALATHEPHFVLLREVV 229
Query: 299 --KFNTKSNKGGSQ--------IVT------PEETKFFLLHLSLMRDYLELEFGKLKEPG 342
F +S + Q IV P+E F L H++++RDYL+LE + +
Sbjct: 230 TFGFGQESRRAREQREQDESDGIVADKSYQKPDE--FVLFHVNVLRDYLDLEV-RERLGD 286
Query: 343 VLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINE 402
L + +E ++DD+VLM F IGNDF+P++P L I +G+L + +Y + + Y+ +
Sbjct: 287 KLPTNYDLERVVDDFVLMCFFIGNDFLPSIPTLGIHDGSLVQMLDLYAQRVLLAHTYLTD 346
Query: 403 GGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAA 462
G ++ + E +L LA +F + + A Q + +M ++ + H+ AA
Sbjct: 347 MGRIDWRAVEGWLQGLADLEFTTIKAREAQEQEYQRRMAQQCGE--HR----------AA 394
Query: 463 LIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVT 522
I T V + Y++ YY D+ + F + D +L
Sbjct: 395 TIS---------TSTVESLREYKDRYYRDKHQ-----FAMGWDPQGEDMAKLRLH----- 435
Query: 523 NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLN--LKYEMGE 580
YI I W + YYY G SW WY+PHHYAP SD+ + + +K++ G+
Sbjct: 436 ----------YIEGIMWVIGYYYQGPPSWKWYFPHHYAPMASDLVNLPAVAACVKFDPGK 485
Query: 581 PFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLI 640
PFLP QQLLAVLP S +P Y L+ +NSP+ Y+PE+ D G + WE VVLI
Sbjct: 486 PFLPHQQLLAVLPPMSYRSMPRAYWPLLRSKNSPLARYFPEKLQIDREGTRAPWEGVVLI 545
Query: 641 PFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAV 700
PFI+E L+ A + V+ +T EER NR G +Y Y + F +
Sbjct: 546 PFIEERTLLAAYETVQDRVTPEERKNNRLGLPTLYAYDPTIEAYEVPNSLFGPL------ 599
Query: 701 EKPLYRDDIYVHP--NKLRKGLCQDV-NLKLYVTHFPTL--KHVQFTHKIENAKVKVFQQ 755
+ R D + P K LC V + F TL K T + E+ V +F
Sbjct: 600 RRTTVRRDAFDFPPLTKFIPRLCTGVCTGEQQFEGFTTLRSKWRYITPQRESGVVTIFGM 659
Query: 756 PSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKN- 813
P+R ES+++ ++D + +VA ++G+ + + +PH RV AV+ K IS + N
Sbjct: 660 PARGESLLLGLKDSFNAIAAHEVA-TLVGQEVLVGFPHYRRARVVAVSDKRVHISANINL 718
Query: 814 ----SGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGP 869
G +D ++ KLG+ + N VLVY F G
Sbjct: 719 EGVSCGANVRELNRDASMNIAKELETHRQCMREKLGMSVSNLTVLVY------VNLFTGM 772
Query: 870 R----GKVTQQRTFIRSTVTYAYQSAVLNLQQA----------RESLEY--KTIDEIFYP 913
R G+V R F + YA V LQ R+ +E+ + +
Sbjct: 773 RMTRKGRVV--RNFSKDQTCYAL-PLVARLQDVKLTEDSRYVERDRVEWDNRFGSRVILV 829
Query: 914 GCQCFALSNPH---YGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLP 970
G + ++ YGS G V+ + + ++ +V Q+P V L + N++
Sbjct: 830 GAEPKSMKGKDQQLYGSSGVVVRSSPDAEGTFTVAARVFQKPVSIPHVLLDYASSRNWVS 889
Query: 971 SYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRD-ET 1029
V++++ + PL L GS+ S + G + IGL + ++R N +G+ ++
Sbjct: 890 MPDVSNEVRVGPLALKHLVGSVRT--SPQYGCR--EIGLGLIYTRNNLVRIGYAKQTVRG 945
Query: 1030 TKKW 1033
K W
Sbjct: 946 GKAW 949
>gi|367000872|ref|XP_003685171.1| hypothetical protein TPHA_0D00960 [Tetrapisispora phaffii CBS 4417]
gi|357523469|emb|CCE62737.1| hypothetical protein TPHA_0D00960 [Tetrapisispora phaffii CBS 4417]
Length = 1313
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 356/1150 (30%), Positives = 562/1150 (48%), Gaps = 155/1150 (13%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAE-VLEQKAKEKGERL--PTEKRFDSNCI 194
P + +MAIDGVAPRAKMNQQR RR R+A +AE ++ GE + + FD N I
Sbjct: 79 PTTIIYMAIDGVAPRAKMNQQRSRRIRTAMDAEKAIDAMKNAIGEENWDSSMEPFDKNSI 138
Query: 195 TPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDY 254
TPGT FM +L L+YF+ K T D W+DV VI SGHE PGEGEHKIMDY
Sbjct: 139 TPGTEFMAQLTINLKYFIHEKKTNDS---------NWRDVQVIFSGHEVPGEGEHKIMDY 189
Query: 255 IRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN-KGGSQIVT 313
IR +KS+ DY+PN RHC+YG DADLI+LGL TH P+ ++LREE+ F K + + G
Sbjct: 190 IRKLKSQRDYDPNSRHCIYGSDADLIILGLSTHIPHLAVLREEMIFGRKKDIRAG----- 244
Query: 314 PEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLP 373
E F LLH+S++R+YLELEF LK LSF + E IIDD+VL+ F+IGNDF+PNLP
Sbjct: 245 LEAQNFLLLHMSILREYLELEFEDLKTK--LSFKYDFERIIDDFVLILFVIGNDFLPNLP 302
Query: 374 DLHIINGALPLLYKVYQEVLPTLDG------------------YINEGGYLNLKR----- 410
DLH+ GA P++ + +++ L +LD Y++ ++N K+
Sbjct: 303 DLHLNKGAFPVILETFKKALMSLDSYINFNGTINLERLGVWLDYLSHFEFMNFKQKVFTV 362
Query: 411 --FEKFLTKLASFD-----------------------------------FEQFREKYADI 433
F + L K+ + + F RE+ DI
Sbjct: 363 QWFNEQLNKIPTINKNVNDQNDLQKKLNLINSMLHWVTKMDTEILSPSSFAINREQIKDI 422
Query: 434 QYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDY--DDGTEEVLNY---------- 481
+ K+ + + F K + + ++ A D +Y TE ++ Y
Sbjct: 423 YHFFNKLSEGYG--FEISKDQSENYIISKTQNANDVNYIKSSLTELLICYEDLIKDQNKT 480
Query: 482 -ANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVT-NEVLRDQAECYIRAIQW 539
+N ++ Y D+ + W+ N YY KL++++ + E LR+ Y+ +QW
Sbjct: 481 KSNVQDIYNEDKFKSWKQN-----------YYKSKLEFSETSYGEDLRNLTANYVEGLQW 529
Query: 540 NLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKEL 599
L YYY C SWSWYY +HYAP ISD++D + ++ EPF PFQQL+AVLP+ S +L
Sbjct: 530 VLDYYYKECPSWSWYYKYHYAPRISDLRDGLKQRIVFDQDEPFTPFQQLMAVLPSRSSKL 589
Query: 600 LPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLL 659
+P ++ LM +SPI+++YP D NGK DWEAVVLI F+D+ +LI AM +LL
Sbjct: 590 IPSIFRPLMLDPSSPIIDFYPTTVKFDKNGKAADWEAVVLISFVDQDRLINAMKPFLNLL 649
Query: 660 TDEERSRNRHGPMLVYTY---SNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKL 716
T EE SRN HG +++ Y +N T+L + IN+ +E D
Sbjct: 650 TPEEASRNAHGSNIMFFYDSKNNSTYQTSLKGAFKDIIND-KCIELEFTIDVPEEVKYGF 708
Query: 717 RKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNE--SIIIVQDKVQVPSL 774
KG + N++ FP+L +++FT+K+ N +F+ P++ SI I ++ +L
Sbjct: 709 LKGTLEKSNMR---PKFPSLYYLKFTNKLLNCGCLIFESPTQQSSMSINIPNRQMSEKAL 765
Query: 775 KQVADQILGKTIFINYPHLIEIRVQAVATKD---SRISFDKNS-----GPVFERAAKDMQ 826
++ LGK F ++P+L RV + T + ++I D N G + + +
Sbjct: 766 QKFILMNLGKVAFTSWPYLELSRVTSFITDEYEYTQIGRDDNDKKKGMGYISRKLTTKEK 825
Query: 827 DAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVES-RKYFFGPRGKVTQQRTFIRSTVT 885
F K SI V + + VLV Q E K G K+ F +
Sbjct: 826 ADFHKLKTSIIRKLQKTSAVILQSITVLVKVQCFERLEKNINGSFKKI-----FKNNFEY 880
Query: 886 YAYQSAVLNLQ-QARESLEYK-----TIDEIFYPGCQCFALSNPHYGSGGCVISTVKEEN 939
+ Q + N + + Y + +E F L +YG+ G ++ + +
Sbjct: 881 HPLQVVIFNGNTKLLKEFNYTQGPSLSFEEQFPKDTFIVCLGKENYGNYGQIVDNLNGKK 940
Query: 940 SFIKLSFKVQQEP--DLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDS 997
IK S + + +L+ + L+ Y P++ V L ISPL L+ T +ID+
Sbjct: 941 LHIKCSHNISPDDYINLAKQLKLKSMDDVKYYPTHKVCKLLKISPLFLANITSRFVVIDA 1000
Query: 998 TEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFL 1057
+ NI + ++F +++++G+T ++ W Y+E+ + L+ + K+FP +F L
Sbjct: 1001 KDNAI---NIAIPMRFKNIDKKIMGYTYKNNNL--WMYSEKAINLLLKFKKKFPALFQRL 1055
Query: 1058 KDHSSDDIYLR-DDVFPHQGEQRVAQIV----SWLKEQPHAKAEVRPCGAAVVDAKVVSL 1112
+ + D ++R ++FP + ++ W+ E+ + +V + D V +
Sbjct: 1056 SN--TKDRFIRIKNIFPDVSADDLITVLKDVKKWINEETVSFIKVSNSCHMLNDESVQCI 1113
Query: 1113 IEHAVDTCEKVEKQITLFVKPNKLYIPKPT--LDKLCPDPDTKFKLFDRVVNIRDCYTVP 1170
E+ ++ + N +I +P + L F L DR++ ++ VP
Sbjct: 1114 EEYQKSRSNELIDTNKSDLITNAKFIKRPETFTNNLISQT---FNLGDRILFVQSYGKVP 1170
Query: 1171 LGYRGTIIGI 1180
+GT+IG+
Sbjct: 1171 FASKGTVIGL 1180
Score = 126 bits (317), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPND--NDPHFRITEK 58
MG+PKFFRYISER+P + + V + P FD LYLDMN I H +H ND +D T++
Sbjct: 1 MGIPKFFRYISERWPMILQQVEPDKTPGFDYLYLDMNSIFHMATHSNDVSDDVGKGTTDE 60
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAE 109
I+ IF YI+ +F MI+P + +MAIDGVAPRAKMNQQR RR R+A +AE
Sbjct: 61 VIYSRIFTYIDHIFLMIKPTTIIYMAIDGVAPRAKMNQQRSRRIRTAMDAE 111
>gi|449687936|ref|XP_002167193.2| PREDICTED: 5'-3' exoribonuclease 1, partial [Hydra magnipapillata]
Length = 487
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 254/500 (50%), Positives = 327/500 (65%), Gaps = 58/500 (11%)
Query: 144 MAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCR 203
MA+DG APRAKMNQQR RRFR+AKEAE +KA +KG+ LP + RFDSNCITPGT FM R
Sbjct: 1 MAVDGCAPRAKMNQQRSRRFRTAKEAEEAIRKAIQKGQTLPPDDRFDSNCITPGTEFMWR 60
Query: 204 LHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVI-LSGHETPGEGEHKIMDYIRYMKSKP 262
L QL+YFV KI++D LW++ C I LSGH+ PGEGEHK+MD+IRY KSKP
Sbjct: 61 LQHQLKYFVNQKISSDPLWQE----------CTIYLSGHDVPGEGEHKVMDFIRYCKSKP 110
Query: 263 DYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLL 322
DY+PN RHCLYGLDADLIMLGL THEP+FSLLREE+++ +S + ++ P+E F LL
Sbjct: 111 DYDPNTRHCLYGLDADLIMLGLSTHEPHFSLLREEIRYGKQSKR----LLRPDEQTFHLL 166
Query: 323 HLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGAL 382
HLSL+R+YLE+EF +K+ +L F F E IIDDW+ +GFL+GNDF+P+LP +HI + AL
Sbjct: 167 HLSLLREYLEMEFIIVKD--LLHFRFDTERIIDDWIFLGFLVGNDFVPHLPHMHINHDAL 224
Query: 383 PLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMG- 441
P ++K+Y+E LPT DGY+N+GG +NL R +KF L+ FD E+F E YAD+++LE K
Sbjct: 225 PYIFKIYKEFLPTTDGYLNDGGMINLCRLKKFFEFLSKFDRERFHEVYADLKWLESKGSG 284
Query: 442 ---------KKFSDVFHK-------------EKSKEMDP--DLAALIKATDDDYD----- 472
KKF+DV + KSK D + A I D+
Sbjct: 285 KLLENSAGKKKFADVMRELALEELNEDLEEIRKSKLFDSQYSINANISGAFDELSLNLTP 344
Query: 473 --DGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQA 530
G + LN D + E F EF QHK YY K D NE ++
Sbjct: 345 EKPGKLKTLN---------DDIEVEDDETFELEFQQHKRHYYMEKFDMDIADNEHIQTIC 395
Query: 531 ECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLA 590
Y+ A+QW HYY+NG SWSWYYP+HY+PYISD+ +F + +EMG PFLPF+QLLA
Sbjct: 396 TEYVIALQWISHYYFNGLQSWSWYYPYHYSPYISDVANFELKEINFEMGHPFLPFEQLLA 455
Query: 591 VLPAASKELLPEPYQNLMTL 610
VLPAAS++LLPE YQ +++
Sbjct: 456 VLPAASRKLLPEAYQVMISF 475
Score = 69.7 bits (169), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 38/47 (80%)
Query: 83 MAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
MA+DG APRAKMNQQR RRFR+AKEAE +KA +KG+ LP + RFD
Sbjct: 1 MAVDGCAPRAKMNQQRSRRFRTAKEAEEAIRKAIQKGQTLPPDDRFD 47
>gi|410971335|ref|XP_003992125.1| PREDICTED: 5'-3' exoribonuclease 1 [Felis catus]
Length = 1672
Score = 474 bits (1220), Expect = e-130, Method: Compositional matrix adjust.
Identities = 274/708 (38%), Positives = 415/708 (58%), Gaps = 42/708 (5%)
Query: 554 YYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENS 613
YYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP YQ+LMT E+S
Sbjct: 420 YYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDS 479
Query: 614 PILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPML 673
PI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L EER RN+H L
Sbjct: 480 PIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECL 539
Query: 674 VYTYSNVNLGT--ALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLK-LYV 730
+ Y T + P+ FPAI K + D V + K V+ K LY
Sbjct: 540 MCWYDRDTEFTYPSPWPEKFPAIERCCTRYKIISLDAWRV---DISKNKITRVDQKALYF 596
Query: 731 THFPTLKHVQFTHKI---ENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQVADQILGK 784
FPTLKH++ HK E V+VFQQ SR E++ I++ + S++ +A +LGK
Sbjct: 597 CGFPTLKHIK--HKFFFEEKMGVQVFQQSSRGENMMLEILLSAESDELSIENIASSVLGK 654
Query: 785 TIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAAKDMQDAFQL 831
++F+N+PHL E RV V+ +++ ++ G V K+ Q +
Sbjct: 655 SVFVNWPHLEEARVVGVSDGETKFYLEEPPGTQKLYLGRTAPPSKVVHLGDKE-QSNWTK 713
Query: 832 SKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSA 891
+ I++ Y + G+ I T +VY Q + RKY G+V ++ + + + + YQ+
Sbjct: 714 EVQGISEYYLRRKGIIINETSAVVYVQLLTGRKYQINQNGEVRLEKQWSKQVLPFVYQTI 773
Query: 892 VLNLQQARESL-EYKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEENSFIKLSFKV 948
V +++ KT+D++F F L P+YG G V + V E I++ F +
Sbjct: 774 VKDIRAFDSRFSSIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEGR-IRVVFSI 832
Query: 949 QQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE---EGAKRH 1005
EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI + G +
Sbjct: 833 PCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKA 892
Query: 1006 NIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDI 1065
N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F ++ +S +D+
Sbjct: 893 NVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSYIAKNSQEDV 950
Query: 1066 YLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCE- 1121
+ DD++P + G ++V +I++WLK P + C ++DA +V IE V+ C+
Sbjct: 951 FYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVEKCKQ 1010
Query: 1122 -KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI 1180
K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+G RGTIIGI
Sbjct: 1011 RKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPVGLRGTIIGI 1070
Query: 1181 VQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 1071 KGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 1118
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/314 (62%), Positives = 239/314 (76%), Gaps = 14/314 (4%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKALEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LK+ ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKDK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYITILPELGGYINENGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKF 444
D+++ E K+G K+
Sbjct: 356 VDLKWFESKVGNKY 369
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKALEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|238579002|ref|XP_002388906.1| hypothetical protein MPER_12027 [Moniliophthora perniciosa FA553]
gi|215450629|gb|EEB89836.1| hypothetical protein MPER_12027 [Moniliophthora perniciosa FA553]
Length = 653
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 260/604 (43%), Positives = 352/604 (58%), Gaps = 81/604 (13%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKKLFFMA+DGVAPRAKMNQQR RRFR+AKEA + +KA+ KGE+LP EK FDSNCITPG
Sbjct: 63 PKKLFFMAVDGVAPRAKMNQQRSRRFRTAKEAREVREKAEAKGEKLPDEKAFDSNCITPG 122
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L +QLRYFV KIT D W++V V+LSGHE PGEGEHKIM+YIR
Sbjct: 123 TSFMAKLSEQLRYFVNKKITEDS---------NWRNVEVVLSGHEVPGEGEHKIMEYIRL 173
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
+++PDYNPNMRHCLYGLDADLIMLGL +H+P+F LLREEVKF K + + E
Sbjct: 174 SRAQPDYNPNMRHCLYGLDADLIMLGLLSHDPHFCLLREEVKFGPARKKTNNSL---ESI 230
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F+LLHLSL R+YL+ EF + L FP+S+E +IDD++L+ +GNDF+PNLPDLHI
Sbjct: 231 NFYLLHLSLFREYLDTEFHSIAP--ALPFPYSLERVIDDFILLAVFVGNDFLPNLPDLHI 288
Query: 378 INGALPLLYKVYQEV---------------LPTLDGYINEGGYLNLKRFEKFLTKLASFD 422
L +++VY+ V +P L ++E + FEK ++ F
Sbjct: 289 HENGLERIFEVYKRVLPSLDGYVNDSGTINMPRLQCILDEMATWEQEVFEKEYADMSWFK 348
Query: 423 ----------------------------FEQFREKYADIQYLEGKMGKKFSDVFHKEKSK 454
FE+ RE + +G+ K +D+ ++++
Sbjct: 349 GKQASQLEKLEQARKNKGLILTPEQRELFERVREFVLTKKEKDGERLKIVNDLPARDRTF 408
Query: 455 EMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRT---------------- 498
+ A D+YDD +L + + ED++
Sbjct: 409 MATLAENMNLDAAWDEYDDDGNNLLVLS-----LPTKEDDDSSEDEVAAAESEAAIHRVL 463
Query: 499 NFFSE---FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYY 555
N +S+ + K DYY KL+ + E + Y +QW +HYY++G SW W+Y
Sbjct: 464 NKYSKXRPMAEWKRDYYRTKLEINFDSPEEMGKLIRRYAEGLQWVMHYYFSGVASWGWFY 523
Query: 556 PHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPI 615
+HYAP ISD+K ++ +E+G+PF PF+QL+ VLP+ASKEL+P+ Y LM SPI
Sbjct: 524 DYHYAPRISDLKGLDEMSFDFELGKPFKPFEQLMGVLPSASKELVPQAYWPLMIDPVSPI 583
Query: 616 LEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
+YP F DLNGKKQDWEA+V IPFI+E +L+ AM + E+LL+ EE RN G +
Sbjct: 584 SHFYPLTFELDLNGKKQDWEAIVKIPFINEKELLAAMSSRENLLSSEECGRNSFGTSTRF 643
Query: 676 TYSN 679
TY+
Sbjct: 644 TYAG 647
Score = 171 bits (434), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 97/129 (75%), Gaps = 14/129 (10%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PK ++ E +IPEFDNLYLD NGIIHNCSHPND D HFR++E+QI
Sbjct: 1 MGIPK--------------LIEENKIPEFDNLYLDFNGIIHNCSHPNDEDAHFRLSEEQI 46
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF Y++ LF I+PKKLFFMA+DGVAPRAKMNQQR RRFR+AKEA + +KA+ KGE
Sbjct: 47 FTSIFAYVDHLFGKIRPKKLFFMAVDGVAPRAKMNQQRSRRFRTAKEAREVREKAEAKGE 106
Query: 121 RLPTEKRFD 129
+LP EK FD
Sbjct: 107 KLPDEKAFD 115
>gi|449689746|ref|XP_004212130.1| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Hydra
magnipapillata]
Length = 512
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/495 (49%), Positives = 316/495 (63%), Gaps = 44/495 (8%)
Query: 130 FITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRF 189
F + PKK FFMA+DG APRAKMNQQR RRFR+AKE + + A ++GE LP F
Sbjct: 43 FTLFRIIKPKKNFFMAVDGCAPRAKMNQQRSRRFRTAKEVGISIENAIQRGETLPKGDSF 102
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVI-LSGHETPGEGE 248
DSNCITPGT FM RLHQQL+YF+ KI+TD LWK CV+ SGH PGEGE
Sbjct: 103 DSNCITPGTEFMDRLHQQLKYFINYKISTDPLWKH----------CVVHFSGHNVPGEGE 152
Query: 249 HKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGG 308
HKIMDYIRY KSKPDY+PN RHCLYGLDADLIMLGL HEP+F LLREEV+F KSN
Sbjct: 153 HKIMDYIRYCKSKPDYDPNTRHCLYGLDADLIMLGLSVHEPHFCLLREEVRFGAKSNI-- 210
Query: 309 SQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDF 368
+++P + F LLHLSL+R+YL+LEF +KE L F + +E IIDDW+ +GFL+GNDF
Sbjct: 211 --VLSPGDQVFHLLHLSLLREYLDLEFSSMKES--LEFEYDLEKIIDDWIFLGFLVGNDF 266
Query: 369 IPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFRE 428
+P+LP +HI + ALP Y VY++ L T DGYINEGG +NL R ++F ++ FD+E F E
Sbjct: 267 VPHLPHMHINHDALPYFYSVYKDFLITADGYINEGGVVNLTRLKQFFGCVSDFDYELFAE 326
Query: 429 ---KYADIQYLEGKMGKKFSD-VFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLN-YAN 483
+D + K K F + FHK+ D D+ L++ + DGTE N +AN
Sbjct: 327 WKKTSSDGCAAQYKNHKNFYNTCFHKD-----DFDIDFLLQIFSLENPDGTEGFANAFAN 381
Query: 484 YE-------------EYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQA 530
+ + SD+D EF +HK +YY K N ++
Sbjct: 382 FSFNGSLQKKSKKLIKVKGSDKD----LAIVDEFTEHKQNYYAEKFGMNVKNNIEMQTIC 437
Query: 531 ECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLA 590
Y+ A+QW HYY+NG SWSWYYP+HY+PY+SD+ F + ++G PF PF+QLLA
Sbjct: 438 SNYVTALQWISHYYFNGLQSWSWYYPYHYSPYMSDLASFELEKISMDLGTPFRPFEQLLA 497
Query: 591 VLPAASKELLPEPYQ 605
VLPAAS +LLP+ +Q
Sbjct: 498 VLPAASGKLLPKAFQ 512
Score = 82.0 bits (201), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 45/59 (76%)
Query: 71 LFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
LFR+I+PKK FFMA+DG APRAKMNQQR RRFR+AKE + + A ++GE LP FD
Sbjct: 45 LFRIIKPKKNFFMAVDGCAPRAKMNQQRSRRFRTAKEVGISIENAIQRGETLPKGDSFD 103
>gi|392350257|ref|XP_003750606.1| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Rattus
norvegicus]
Length = 453
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/442 (53%), Positives = 297/442 (67%), Gaps = 53/442 (11%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 45 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 104
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 105 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 155
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 156 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 212
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 213 VCAPEETTFHLLHLSLMREYIDYEFSALKEK--ITFKYDIEKIIDDWILMGFLVGNDFIP 270
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFE++L KL+ FD E F E +
Sbjct: 271 HLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSEVF 330
Query: 431 ADIQYLEGKMGKKFSDVF--------------HKEKSKEMDPDLAALIK------ATDDD 470
D+++ E K+G K+ + K K +E AAL K A+ D+
Sbjct: 331 VDLKWFESKVGNKYLNEAAGAAAEEAKSCKDKRKVKGQENSLSWAALDKREGEGVASRDN 390
Query: 471 YDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQA 530
++D TE D+D F +EF Q+K YY K+ V++E L DQA
Sbjct: 391 FEDETE--------------DDDL-----FETEFRQYKRTYYMTKMGVDVVSDEFLADQA 431
Query: 531 ECYIRAIQWNLHYYYNGCVSWS 552
CY++AIQW LHYYY+G SWS
Sbjct: 432 ACYVQAIQWILHYYYHGVQSWS 453
Score = 182 bits (463), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/104 (78%), Positives = 94/104 (90%)
Query: 26 IPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAI 85
IPEFDNLYLDMNGIIH CSHPND+D HFRI++ +IF DIFHY+E+LFR+I+P+K+FFMA+
Sbjct: 1 IPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAV 60
Query: 86 DGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 61 DGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 104
>gi|452820477|gb|EME27519.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 1343
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 352/1163 (30%), Positives = 560/1163 (48%), Gaps = 108/1163 (9%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE-AEVLEQKAKEKGERLP 184
F++I + F PK+L ++AIDGVAPRAKMNQQR RRFR+AK+ A+ +E + K+ G+ +P
Sbjct: 68 FNYIDMLFSMVRPKRLVYIAIDGVAPRAKMNQQRARRFRTAKDRAQEMENRIKQ-GKPVP 126
Query: 185 TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETP 244
++ FDSNCITPGT FM + L Y V KIT DK W V VILS P
Sbjct: 127 -QRFFDSNCITPGTHFMASFSEALEYLVHKKITEDK---------SWATVEVILSTTNVP 176
Query: 245 GEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNT-- 302
GEGEHKI++YIR K ++ N+ HCLYGLDADLIML L THEP+F LLRE+ +
Sbjct: 177 GEGEHKIIEYIRRKKLSGEWEANLSHCLYGLDADLIMLSLVTHEPHFILLREQTDLSKLF 236
Query: 303 KSNKGGSQI-VTPEE----TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDW 357
S KG + TP + +F + ++R+YL+ EF L ++F +++EN I D+
Sbjct: 237 VSKKGNLAVEATPLDRCISGEFEFFSIGVLREYLDSEFCTLP----ITF-YNLENCIHDF 291
Query: 358 VLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTK 417
+ M FL+GNDF+P LP L+I GAL + +Y+++LP GY+ E G + L+R E FL+K
Sbjct: 292 IFMCFLVGNDFLPQLPTLNIAEGALDTMLTLYKKLLPLFGGYLIENGNIVLERLEIFLSK 351
Query: 418 LASFDFEQFREKYADIQYLEGK------MGKKFSDVFHKEKSKEMDPDLAALIKATDDDY 471
L + + I +G+ +G D++ + + + T +D
Sbjct: 352 LGLLERLIVNRRLEAIAQSKGRAPRMVDIGTSHDDIWGLGNDCNENTEETGIEPWTKED- 410
Query: 472 DDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAE 531
E+ LN E Y + D + K YY KL+ + L
Sbjct: 411 ---IEQALN-----EAYVASTDPLMES--------IKKSYYRDKLNMDLEDKDSLEKLKF 454
Query: 532 CYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLN--LKYEMGEPFLPFQQLL 589
Y++ + W YYY+GC SW W+YP+HYAP SD+ + + + EPFLPFQQLL
Sbjct: 455 TYLKGLLWTWKYYYSGCPSWRWFYPYHYAPMASDLVGLTGVTNICDFSASEPFLPFQQLL 514
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
AVLP S LP Q LM ++SPI +YP +F D++GK+ WE V+ +PF+DE L+
Sbjct: 515 AVLPPQSAWCLPTALQKLMNDKSSPIFRFYPSDFEVDMDGKRNAWEGVIKLPFVDESLLL 574
Query: 650 KAMDAV-EHLLTDEERSRNRHGPMLVYTYSNVNLGTALA--------PDYFPAINENHAV 700
+A ++ L ++EER+RN ++Y +N P++ I E A+
Sbjct: 575 EAYHSIPNELFSEEERNRNACRQTMIYRRHQMNENVKYIKRKIRSPFPNHLRDIEETAAI 634
Query: 701 EKPLYRDDIYVHPNKLRKGLCQDVNLKLYV-THFPTLKHVQFTHKIENAKVKVFQQPSRN 759
+PL + H + L ++ ++PTLK + F+ V VF PS+
Sbjct: 635 CEPLSLPVVDGHHDGFEPHLFPGTSIGASSPGNYPTLKSLSFSIYYAKIGVNVFGIPSKR 694
Query: 760 ESIIIV----QDKVQVPSLKQVADQIL----GKTIFINYPHLIEIRVQAVA-TKDSRISF 810
ES+II ++ + V + GK + + YP E V +V ++S
Sbjct: 695 ESVIIQPQTNHNQGSTTTFMNVVNGQSFFSPGKRVLVEYPWRCEALVWSVINCTGEKVSK 754
Query: 811 DKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPR 870
+ +F D + F + + ++ +DIG + +V + R G
Sbjct: 755 QPGTSELFIHETVD-PNFFIVQLEQFRKQALSRNALDIGEVQYMVGVHLCDKRDPTSGAI 813
Query: 871 GKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGC 930
+ ++ +V + + + ++ TI E+ + PH+G
Sbjct: 814 VSYCNEDIWLPVSVIVPIELST--RMKRKQGYITSTISELNRGDRVVYIGKGPHFGRTAL 871
Query: 931 VISTVKEE-------NSFIKLSFKVQQ--EPDLSDLVHLQDDTVYNYLPSYTVASKLSIS 981
V+S +K + ++K+ F Q+ E D S ++ +D+ V + S T A L +
Sbjct: 872 VVSHIKRPKNDSEFYSDWVKIKFLNQKTVEWDDSKIITNKDEQVTWFSLSNT-AELLKST 930
Query: 982 PLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVT 1041
+SR T S+ + S++ + +IGL +KF K+ V G+ R ++ + ++ +
Sbjct: 931 TYAVSRITSSV-FVKSSKSNDRPEDIGLRLKFVSKSLYVPGYCRLLTSSNSYEFSYSAIQ 989
Query: 1042 LIKNYMKQFPEVFGFL----KDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEV 1097
++ Y ++FP+VF L D S ++ + E V +I WLK AK +
Sbjct: 990 VLLEYKQKFPQVFDILDNTFHDSSLQNVGSKYIDMGVNSEIVVTRIKEWLKSLELAKLPL 1049
Query: 1098 RPCGAAVVDAKVVSLIEHAV--DTCEKVEKQITLFVKPNKLYIPKPTLDK------LCPD 1149
+ V+ + ++ +E + D + +++Q V P +L + +K L
Sbjct: 1050 LHSSSEVMSKEEIANVEQKLKRDQVQSLDEQ--FLVVPRELLLFGDEHEKQRNKTNLAGI 1107
Query: 1150 PDTK--FKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI-- 1205
K L DRVVNI VP G+ GT++GI + +VVFD+PFP G +
Sbjct: 1108 QSLKENVCLKDRVVNISATGPVPFGFHGTVVGI------HGTELEVVFDEPFPAGTDLHH 1161
Query: 1206 RCSESRGYRMPAQAMINLSYGER 1228
RC RG + ++ L E+
Sbjct: 1162 RCPAYRGKTLSRNTVLKLHNSEK 1184
Score = 130 bits (327), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 102/149 (68%), Gaps = 10/149 (6%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI---TE 57
MGVPKF+R++SERYP V +P+ DN YLD NGI+HNC+ P D+ F +E
Sbjct: 1 MGVPKFYRWVSERYPLTIHKVVPSVVPDVDNFYLDANGILHNCARPKDSQEPFPCQYPSE 60
Query: 58 KQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE-AEVLEQKAK 116
++IF + F+YI++LF M++PK+L ++AIDGVAPRAKMNQQR RRFR+AK+ A+ +E + K
Sbjct: 61 EEIFLETFNYIDMLFSMVRPKRLVYIAIDGVAPRAKMNQQRARRFRTAKDRAQEMENRIK 120
Query: 117 EKGERLPTEKRFDFITLKFCFPKKLFFMA 145
+ G+ +P ++ FD C FMA
Sbjct: 121 Q-GKPVP-QRFFD----SNCITPGTHFMA 143
>gi|157864164|ref|XP_001680795.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
gi|68124087|emb|CAJ02069.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
Length = 1490
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 359/1233 (29%), Positives = 563/1233 (45%), Gaps = 218/1233 (17%)
Query: 121 RLPTEKRFD---FITLKFCF----PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLE 173
R PTEK F+ L+ F P+K F +A+DGVAPRAKMNQQR RR+R+ E +
Sbjct: 53 RSPTEKEMIQAMFVYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQRRYRAGYEMMIAR 112
Query: 174 QKAKEKGERLPTEKR-FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWK 232
++A GE +P EK FDSNCITPGTPFM R+ ++ +YF+ +K++TD W+
Sbjct: 113 EEALAMGEEVPEEKDVFDSNCITPGTPFMVRVSKEFQYFITMKLSTDP---------AWQ 163
Query: 233 DVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFS 292
+I SGH+ PGEGEHKI+D+IR K +P+Y+PN HC+YGLDADL+ML L THEP+F
Sbjct: 164 GCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDADLVMLALATHEPHFV 223
Query: 293 LLREEVKFNTKSNKGGSQIVTPEET------------KFFLLHLSLMRDYLELEFGKLKE 340
LLRE V F S K + E +F LLH+++ RDYL+LE
Sbjct: 224 LLREVVAFGPGSRKERERQEEDEAKGLVKDKAYHKADEFVLLHINVFRDYLQLEVKSYLA 283
Query: 341 PGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYI 400
S E +IDD+V M F IGNDF+P LP + I +G++P L ++Y + + + + Y+
Sbjct: 284 KAKSSVSVDFERVIDDFVFMCFFIGNDFLPTLPTIGINDGSIPALLRIYVDNMLSKNKYL 343
Query: 401 NEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDL 460
G ++ + E +L ++ +FE R + Q E + F K +++
Sbjct: 344 THKGEIDWRSAEVWLNEVGKLEFETLRRR----QQEEAE--------FQKNRARR----- 386
Query: 461 AALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAK 520
D ++ T V+ + E+ K YY K +A
Sbjct: 387 -------DPTHEVDTTSVIPITSILEF--------------------KQRYYGEKHGFAG 419
Query: 521 ---VTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHL--NLK 575
++E +R E Y+ + W +HYYY G SW W++PH+YAP SD+ + + N+
Sbjct: 420 GWDASSEDMRRLREHYVEGLMWVMHYYYQGVPSWKWFFPHYYAPMASDMVNLPAIAANVS 479
Query: 576 YEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWE 635
+E+G+PF P QQLLAVLP S +P+ Y L+ +SP+ +Y PE D G + WE
Sbjct: 480 FELGKPFQPHQQLLAVLPPMSYLSMPKAYWPLLRSPSSPLAKYLPEHIVIDREGARAPWE 539
Query: 636 AVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAIN 695
+VLIPFIDE L+ A ++V+ ++ E+ + N +GP L + Y L + F ++
Sbjct: 540 GIVLIPFIDERTLLAAYESVQKNVSPEDAANNVNGPPLRFCYDGKMPLYDLEDEMFGSLR 599
Query: 696 ENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLY-VTHFPTL--KHVQFTHKIENAKVKV 752
N V + Y + H +K LC V + + F TL K E V +
Sbjct: 600 -NVLVRRETY---AFPHIDKFIPQLCSGVRVGTRQLEGFSTLQSKRDLIQPVFEAGVVSI 655
Query: 753 FQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAV--ATKDSRIS 809
F +P++N+S+I+ ++D + S+ QVA ++GK + + +PH R+ ++ A K S
Sbjct: 656 FGRPTKNDSLILQMRDFFKAKSVDQVA-TLVGKEVLVGFPHYKRARIASLKDAHKSITAS 714
Query: 810 FDKN---SGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVY-----GQPVE 861
+ K SG + +D AF + ++LG+ + +VLVY G V
Sbjct: 715 YSKEGTFSGTEEHKNNRDESAAFVKEADTHARFMKSQLGLAVEQVDVLVYVHRFNGMQVT 774
Query: 862 SRKYFFGPRGKVTQQRTFIRSTVTYAYQSAV----LNLQQARESLEYKTIDEIFYPGCQC 917
+ + +R F + Y Q +++Q+ +E + G +C
Sbjct: 775 RKGHI---------ERHFATTWTCYPIQLICTLDSIDMQEDSRCIERDRSEGDSAFGARC 825
Query: 918 FALS-NPH--------YGSGGCVIS-----TVKEENSFIKLSFKVQQEPDLSDLVHLQDD 963
+ P YGS G V++ T ++ + + KV QEP LQ
Sbjct: 826 VYIGPQPKSKKSQMDVYGSCGTVVTAGQHDTTTQQGDQMTVRLKVFQEPLRLPAELLQFA 885
Query: 964 TVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVG- 1022
N+ VA L I P L+ S I+ S + G++ +GL +KF+ + VG
Sbjct: 886 AQRNWTALPQVAISLDILPHTLTSICSS--IVTSPQFGSR--ELGLCLKFTGRCIAKVGY 941
Query: 1023 ------------------FTRRDETTK--------------------------KWFYTEQ 1038
F R ++ T+ W+++
Sbjct: 942 AKLVQHSLNPWYVGNKDIFARMEKDTEDIGYHLEMGEKGDFAGNSSSNRGGSGTWYFSRD 1001
Query: 1039 VVTLIKNYMKQF------------------PEVF--GFLKDHSSDDIYLRDDVFPHQGEQ 1078
LI +Y+K+F P+ F G +D DD+ + F
Sbjct: 1002 AQELICDYVKRFRPLIQYIEAGGVNSNSVEPQQFLTGKWRDRDVDDVLTEIETF------ 1055
Query: 1079 RVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLF-VKPNKLY 1137
I S L+E P A +++ SL + + K+++L V N+LY
Sbjct: 1056 ---LIESGLRETPMITATEEAFPQQLLEQLEASLQQQQ----NRSFKELSLRQVSRNQLY 1108
Query: 1138 IP--KPTLDKLCPDP---DTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYD 1192
P + + L P P + F L RV N R VP G +GTI+ ++ +
Sbjct: 1109 FPVTRSSCGHLVPLPLPQEQTFYLGSRVANCRATGIVPFGTQGTIVRLLASGRE----AE 1164
Query: 1193 VVFDKPFPHGVKI--RCSESRGYRMPAQAMINL 1223
VV+D PF G ++ R ++R A++ L
Sbjct: 1165 VVYDTPFTGGTRLDGRLKDTRAAITKLSALLVL 1197
Score = 144 bits (364), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 90/127 (70%), Gaps = 2/127 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEKQ 59
MGVPKFFR+ +ER+P + ++ P DNLYLD+NGIIHNC+HPND D R TEK+
Sbjct: 1 MGVPKFFRWAAERFPSIITPFKD-SPPPVDNLYLDINGIIHNCTHPNDVDATRRSPTEKE 59
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ Q +F Y+E LF IQP+K F +A+DGVAPRAKMNQQR RR+R+ E + ++A G
Sbjct: 60 MIQAMFVYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQRRYRAGYEMMIAREEALAMG 119
Query: 120 ERLPTEK 126
E +P EK
Sbjct: 120 EEVPEEK 126
>gi|339896661|ref|XP_001463108.2| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
gi|321398929|emb|CAM65457.2| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
Length = 1499
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 358/1233 (29%), Positives = 565/1233 (45%), Gaps = 218/1233 (17%)
Query: 121 RLPTEKRF---DFITLKFCF----PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLE 173
R PTEK F+ L+ F P+K F +A+DGVAPRAKMNQQR RR+R+ E +
Sbjct: 53 RSPTEKEMIQAMFVYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQRRYRAGYEMMIAR 112
Query: 174 QKAKEKGERLPTEKR-FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWK 232
++A GE +P EK FDSNCITPGTPFM R+ ++ +YF+ +K++TD W+
Sbjct: 113 EEALAMGEEVPEEKDVFDSNCITPGTPFMVRVSKEFQYFITMKLSTDP---------AWQ 163
Query: 233 DVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFS 292
+I SGH+ PGEGEHKI+D+IR K +P+Y+PN HC+YGLDADL+ML L THEP+F
Sbjct: 164 GCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDADLVMLALATHEPHFV 223
Query: 293 LLREEVKFNTKSNKGGSQIVTPEET------------KFFLLHLSLMRDYLELEFGKLKE 340
LLRE V F S K + E +F LLH+++ RDYL+LE
Sbjct: 224 LLREVVTFGPGSRKERERQEEDEAKGLVKDKAYHKADEFVLLHINVFRDYLQLEVKGYLA 283
Query: 341 PGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYI 400
S E +IDD+V M F IGNDF+P LP + I +G++P L ++Y + + + Y+
Sbjct: 284 KAKSSVSIDFERVIDDFVFMCFFIGNDFLPTLPTIGINDGSIPALLRIYVDNMLSKSKYL 343
Query: 401 NEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDL 460
G ++ + E +L ++ +FE R + Q E + F K +++
Sbjct: 344 THKGEIDWRNAEVWLNEVGKLEFETLRRR----QQEEAE--------FQKNRARR----- 386
Query: 461 AALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAK 520
D ++ T V+ + E+ K YY K +A
Sbjct: 387 -------DPTHEVDTASVIPITSILEF--------------------KQRYYGEKHGFAG 419
Query: 521 ---VTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHL--NLK 575
+E ++ E Y+ + W +HYYY G SW W++PH+YAP SD+ + + +
Sbjct: 420 GWDANSEDMQRLREHYVEGLMWVMHYYYQGVPSWKWFFPHYYAPMASDMVNLPAIAARVS 479
Query: 576 YEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWE 635
+E+G+PF P QQLLAVLP S +P+ Y L+ +SP+ +Y PE D G + WE
Sbjct: 480 FELGKPFQPHQQLLAVLPPMSYLSMPKAYWPLLRSPSSPLAKYLPEHIVIDREGARAPWE 539
Query: 636 AVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAIN 695
+VLIPFIDE L+ A ++V+ ++ E+ + N +GP L + Y L + F +I
Sbjct: 540 GIVLIPFIDERTLLAAYESVQKNVSPEDAANNVNGPPLRFCYDGKMPPYDLEDEMFGSIR 599
Query: 696 ENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLY-VTHFPTL--KHVQFTHKIENAKVKV 752
N V + Y + H +K LC V++ + F TL K E V +
Sbjct: 600 -NVLVRRETY---AFPHIDKFIPQLCPGVHVGTRQLEGFSTLQSKRDLIQPVFEAGVVSI 655
Query: 753 FQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFD 811
F +P++N+S+I+ ++D + S+ QVA ++GK + + +PH R+ ++ I+
Sbjct: 656 FGRPTKNDSLILQMRDFFKAKSVDQVA-TLVGKEVLVGFPHYKRARIASLKDVHKSITAS 714
Query: 812 KNSGPVF---ERAAKDMQDAFQLSKKSITDGYYTK--LGVDIGNTEVLVY-----GQPVE 861
+ F E + +++ K++ T + K LG+ + EVLVY G V
Sbjct: 715 YSKEGTFSGTEEHKNNREESTAFVKEADTHARFMKSQLGLAVEQVEVLVYVHRFNGMQVT 774
Query: 862 SRKYFFGPRGKVTQQRTFIRSTVTYAYQSAV----LNLQQARESLEYKTIDEIFYPGCQC 917
+ + +R F + Y Q +++Q+ +E + G +C
Sbjct: 775 RKGHI---------ERHFATTWTCYPIQLICTLDNIDMQEDSRYVERDRSEGDSAFGARC 825
Query: 918 FALS-NPH--------YGSGGCVIS-----TVKEENSFIKLSFKVQQEPDLSDLVHLQDD 963
+ P YGS G V++ T ++ + + KV QEP LQ
Sbjct: 826 VYIGPQPKSKKSQMDVYGSCGTVVTAGQHDTTTQQGDQMTVRLKVFQEPLRLPAELLQFA 885
Query: 964 TVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVG- 1022
N+ VA L I P L+ S I+ S + G++ +GL +KF+ + VG
Sbjct: 886 AQRNWTALPQVAISLDILPHTLTIICSS--IVTSPQFGSR--ELGLCLKFTGRCIAKVGY 941
Query: 1023 ------------------FTRRDETTK--------------------------KWFYTEQ 1038
F R ++ T+ W+++
Sbjct: 942 AKLVQHSLNPWYVGNKDIFARMEKDTEDIGYHLEMGEKGDFTGNSSSNRGGSGTWYFSRD 1001
Query: 1039 VVTLIKNYMKQF------------------PEVF--GFLKDHSSDDIYLRDDVFPHQGEQ 1078
LI++Y+K+F P+ F G +D DD+ + F
Sbjct: 1002 AQELIRDYVKRFRPLIQYIEAGGVNSNSVEPQQFLTGKWRDRDVDDVLTEIETF------ 1055
Query: 1079 RVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLF-VKPNKLY 1137
I S L+E P A +++ SL E + K+++L V N+LY
Sbjct: 1056 ---LIESGLRETPMITATEEAFPQQLLEQLEASLQEQQ----NRSFKELSLRQVSRNQLY 1108
Query: 1138 IP--KPTLDKLCPDP---DTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYD 1192
P + + L P P + F L RV N R VP G +GTI+ ++ + +A +
Sbjct: 1109 FPVTRSSCGHLVPLPLPQEQTFYLGSRVANCRATGIVPFGTQGTIVRLL--ASGREA--E 1164
Query: 1193 VVFDKPFPHGVKI--RCSESRGYRMPAQAMINL 1223
VV+D PF G ++ R ++R A++ L
Sbjct: 1165 VVYDTPFTGGTRLDGRLKDTRAAITKLSALLVL 1197
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 90/127 (70%), Gaps = 2/127 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEKQ 59
MGVPKFFR+ +ER+P + ++ P DNLYLD+NGIIHNC+HPND D R TEK+
Sbjct: 1 MGVPKFFRWAAERFPSIITPFKD-SPPPVDNLYLDINGIIHNCTHPNDVDATRRSPTEKE 59
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ Q +F Y+E LF IQP+K F +A+DGVAPRAKMNQQR RR+R+ E + ++A G
Sbjct: 60 MIQAMFVYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQRRYRAGYEMMIAREEALAMG 119
Query: 120 ERLPTEK 126
E +P EK
Sbjct: 120 EEVPEEK 126
>gi|398010273|ref|XP_003858334.1| 5'-3' exonuclease, putative [Leishmania donovani]
gi|322496541|emb|CBZ31610.1| 5'-3' exonuclease, putative [Leishmania donovani]
Length = 1499
Score = 451 bits (1161), Expect = e-123, Method: Compositional matrix adjust.
Identities = 357/1233 (28%), Positives = 564/1233 (45%), Gaps = 218/1233 (17%)
Query: 121 RLPTEKRFD---FITLKFCF----PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLE 173
R PTEK F+ L+ F P+K F +A+DGVAPRAKMNQQR RR+R+ E +
Sbjct: 53 RSPTEKEMIQAMFVYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQRRYRAGYEMMIAR 112
Query: 174 QKAKEKGERLPTEKR-FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWK 232
++A GE +P EK FDSNCITPGTPFM R+ ++ +YF+ +K++TD W+
Sbjct: 113 EEALAMGEEVPEEKDVFDSNCITPGTPFMVRVSKEFQYFITMKLSTDP---------AWQ 163
Query: 233 DVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFS 292
+I SGH+ PGEGEHKI+D+IR K +P+Y+PN HC+YGLDADL+ML L THEP+F
Sbjct: 164 GCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDADLVMLALATHEPHFV 223
Query: 293 LLREEVKFNTKSNKGGSQIVTPEET------------KFFLLHLSLMRDYLELEFGKLKE 340
LLRE V F S K + E +F LLH+++ RDYL+LE
Sbjct: 224 LLREVVTFGPGSRKERERQEEDEAKGLVKDKAYHKADEFVLLHINVFRDYLQLEVKGYLA 283
Query: 341 PGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYI 400
S E +IDD+V M F IGNDF+P LP + I +G++P L +Y + + + Y+
Sbjct: 284 KAKSSVSIDFERVIDDFVFMCFFIGNDFLPTLPTIGINDGSIPALLHIYVDNMLSKSKYL 343
Query: 401 NEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDL 460
G ++ + E +L ++ +FE R + Q E + F K +++
Sbjct: 344 THKGEIDWRNAEVWLNEVGKLEFETLRRR----QQEEAE--------FQKNRARR----- 386
Query: 461 AALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAK 520
D ++ T V+ + E+ K YY K +A
Sbjct: 387 -------DPTHEVDTASVIPITSILEF--------------------KQRYYGEKHGFAG 419
Query: 521 ---VTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHL--NLK 575
+E ++ E Y+ + W +HYYY G SW W++PH+YAP SD+ + + +
Sbjct: 420 GWDANSEDMQRLREHYVEGLMWVMHYYYQGVPSWKWFFPHYYAPMASDMVNLPAIAARVS 479
Query: 576 YEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWE 635
+E+G+PF P QQLLAVLP S +P+ Y L+ +SP+ +Y PE D G + WE
Sbjct: 480 FELGKPFQPHQQLLAVLPPMSYLSMPKAYWPLLRSPSSPLAKYLPEHIVIDREGARAPWE 539
Query: 636 AVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAIN 695
+VLIPFIDE L+ A ++V+ ++ E+ + N +GP L + Y L + F ++
Sbjct: 540 GIVLIPFIDERTLLAAYESVQKNVSPEDAANNVNGPPLRFCYDGKMPPYDLEDEMFGSL- 598
Query: 696 ENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLY-VTHFPTL--KHVQFTHKIENAKVKV 752
N V + Y + H +K LC V++ + F TL K E V +
Sbjct: 599 RNVLVRRETY---AFPHIDKFIPQLCPGVHVGTRQLEGFSTLQSKRDLIQPVFEAGVVSI 655
Query: 753 FQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFD 811
F +P++N+S+I+ ++D + S+ QVA ++GK + + +PH R+ ++ I+
Sbjct: 656 FGRPTKNDSLILQMRDFFKAKSVDQVA-TLVGKEVLVGFPHYKRARIASLKDVHKSITAS 714
Query: 812 KNSGPVF---ERAAKDMQDAFQLSKKSITDGYYTK--LGVDIGNTEVLVY-----GQPVE 861
+ F E + +++ K++ T + K LG+ + EVLVY G V
Sbjct: 715 YSKEGTFSGTEEHKNNREESTAFVKEADTHARFMKSQLGLAVEQVEVLVYVHRFNGMQVT 774
Query: 862 SRKYFFGPRGKVTQQRTFIRSTVTYAYQSAV----LNLQQARESLEYKTIDEIFYPGCQC 917
+ + +R F + Y Q +++Q+ +E + G +C
Sbjct: 775 RKGHI---------ERHFATTWTCYPIQLICTLDNIDMQEDSRYVERDRSEGDSAFGARC 825
Query: 918 FALS-NPH--------YGSGGCVIS-----TVKEENSFIKLSFKVQQEPDLSDLVHLQDD 963
+ P YGS G V++ T ++ + + KV QEP LQ
Sbjct: 826 VYIGPQPKSKKSQMDVYGSCGTVVTAGQHDTTTQQGDQMTVRLKVFQEPLRLPAELLQFA 885
Query: 964 TVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVG- 1022
N+ VA L I P L+ S I+ S + G++ +GL +KF+ + VG
Sbjct: 886 AQRNWTALPQVAISLDILPHTLTSICSS--IVTSPQFGSR--ELGLCLKFTGRCIAKVGY 941
Query: 1023 ------------------FTRRDETTK--------------------------KWFYTEQ 1038
F R ++ T+ W+++
Sbjct: 942 AKLVQHSLNPWYVGNKDIFARMEKDTEDIGYHLEMGEKGDFTGNSSSNRGGSGTWYFSRD 1001
Query: 1039 VVTLIKNYMKQF------------------PEVF--GFLKDHSSDDIYLRDDVFPHQGEQ 1078
LI++Y+K+F P+ F G +D DD+ + F
Sbjct: 1002 AQELIRDYVKRFRPLIQYIEAGGVNSNSVEPQRFLTGKWRDRDVDDVLTEIETF------ 1055
Query: 1079 RVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLF-VKPNKLY 1137
I S L+E P A +++ SL E + K+++L V N+LY
Sbjct: 1056 ---LIESGLRETPMITATEEAFPQQLLEQLEASLQEQQ----NRSFKELSLRQVSRNQLY 1108
Query: 1138 IP--KPTLDKLCPDP---DTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYD 1192
P + + L P P + F L RV N R VP G +GTI+ ++ + +A +
Sbjct: 1109 FPVTRSSCGHLVPLPLPQEQTFYLGSRVANCRATGIVPFGTQGTIVRLLA--SGREA--E 1164
Query: 1193 VVFDKPFPHGVKI--RCSESRGYRMPAQAMINL 1223
VV+D PF G ++ R ++R A++ L
Sbjct: 1165 VVYDTPFTGGTRLDGRLKDTRAAITKLSALLVL 1197
Score = 144 bits (364), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 90/127 (70%), Gaps = 2/127 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEKQ 59
MGVPKFFR+ +ER+P + ++ P DNLYLD+NGIIHNC+HPND D R TEK+
Sbjct: 1 MGVPKFFRWAAERFPSIITPFKD-SPPPVDNLYLDINGIIHNCTHPNDVDATRRSPTEKE 59
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ Q +F Y+E LF IQP+K F +A+DGVAPRAKMNQQR RR+R+ E + ++A G
Sbjct: 60 MIQAMFVYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQRRYRAGYEMMIAREEALAMG 119
Query: 120 ERLPTEK 126
E +P EK
Sbjct: 120 EEVPEEK 126
>gi|21755602|dbj|BAC04718.1| unnamed protein product [Homo sapiens]
Length = 473
Score = 448 bits (1153), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/427 (54%), Positives = 294/427 (68%), Gaps = 33/427 (7%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKFSDVF----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
D+++ E K+G K+ + +KEK K + + A D + E + +
Sbjct: 356 VDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALD---KNEGEMITS 412
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E+ ED++ F +EF Q+K YY K+ V+++ L DQA CY++AIQW
Sbjct: 413 KDNLED---ETEDDDL---FETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWI 466
Query: 541 LHYYYNG 547
LHYYY+G
Sbjct: 467 LHYYYHG 473
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/129 (79%), Positives = 118/129 (91%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFR ++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRTSDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|401415084|ref|XP_003872038.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488260|emb|CBZ23505.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1527
Score = 448 bits (1152), Expect = e-122, Method: Compositional matrix adjust.
Identities = 349/1232 (28%), Positives = 560/1232 (45%), Gaps = 216/1232 (17%)
Query: 121 RLPTEKRFD---FITLKFCF----PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLE 173
R PTEK FI L+ F P+K F +A+DGVAPRAKMNQQR RR+R+ E +
Sbjct: 53 RSPTEKEMIQAMFIYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQRRYRAGYEMMIAR 112
Query: 174 QKAKEKGERLPTEKR-FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWK 232
Q+A GE +P EK FDSNCITPGTPFM R+ ++ +YF+ +K++TD W+
Sbjct: 113 QEALAMGEEVPEEKDVFDSNCITPGTPFMVRVSKEFQYFITMKLSTDP---------AWQ 163
Query: 233 DVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFS 292
+I SGH+ PGEGEHKI+D+IR K +P+Y+PN HC+YGLDADL+ML L THEP+F
Sbjct: 164 GCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDADLVMLALATHEPHFV 223
Query: 293 LLREEVKFNTKSNKGGSQIVTPEET------------KFFLLHLSLMRDYLELEFGKLKE 340
LLRE V F S K + E +F LLH+++ RDYL+LE
Sbjct: 224 LLREVVTFGPGSRKERERQEEDEAKGLVKDKAYHKADEFVLLHINVFRDYLQLEVKGYLA 283
Query: 341 PGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYI 400
S E +IDD+V M F IGNDF+P LP + I +G++P L ++Y + + + + Y+
Sbjct: 284 KAKSSASMDFERVIDDFVFMCFFIGNDFLPTLPTIGINDGSIPALLRIYVDNMLSKNKYL 343
Query: 401 NEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDL 460
G ++ + E +L ++ +FE R + + + ++ D H+ + + P
Sbjct: 344 THKGEIDWRNAEVWLNEVGKLEFETLRRRQQEEAEFQKNRARR--DPTHEVDATSVMP-- 399
Query: 461 AALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAK 520
+ + +++ YY + + F + + D
Sbjct: 400 -----------------ITSILEFKQRYYGE-----KHGFAGGWDANSAD---------- 427
Query: 521 VTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHL--NLKYEM 578
+R E Y+ + W +HYYY G SW W++PH+YAP SD+ + + + +E+
Sbjct: 428 -----MRRLREHYVEGLMWVMHYYYQGVPSWKWFFPHYYAPMASDMVNLPAIAARVSFEL 482
Query: 579 GEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVV 638
G+PF P QQLLAVLP S +P+ Y L+ +SP+ +Y PE D G + WE +V
Sbjct: 483 GKPFQPHQQLLAVLPPMSYLSMPKAYWPLLRSPSSPLAKYLPEHIVIDREGARAPWEGIV 542
Query: 639 LIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENH 698
LIPFIDE L+ A ++V+ ++ E+ + N +GP L + Y L F ++
Sbjct: 543 LIPFIDERTLLAAYESVQKNVSPEDAANNVNGPPLRFCYDGKMPPYELEDGMFGSLRNV- 601
Query: 699 AVEKPLYRDDIYVHP--NKLRKGLCQDVNLKLY-VTHFPTL--KHVQFTHKIENAKVKVF 753
L R + Y P +K LC V++ + F TL K E V +F
Sbjct: 602 -----LVRRETYAFPPIDKFTPQLCPGVHVGTRQLEGFSTLQSKRDLIQPIFEAGVVSIF 656
Query: 754 QQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDK 812
+P++N+S+I+ ++D + S+ QVA ++GK + + +PH R+ ++ I+
Sbjct: 657 GRPTKNDSLILQMRDFFKAKSVDQVA-TLVGKEVLVGFPHYKRARIASLKDVHKSITASY 715
Query: 813 NSGPVF---ERAAKDMQDAFQLSKKSITDGYYTK--LGVDIGNTEVLVY-----GQPVES 862
+ F E + +++ K++ T + K LG+ + +VLVY G V
Sbjct: 716 SKEGTFSGTEEHKNNREESAAFVKEADTHARFMKSQLGLGVEQVDVLVYVHRFNGMQVTR 775
Query: 863 RKYFFGPRGKVTQQRTFIRSTVTYAYQSAV----LNLQQARESLEYKTIDEIFYPGCQCF 918
+ + +R F + Y +N+Q+ +E + G +C
Sbjct: 776 KGHI---------ERHFATTWTCYPIHLICTMDNINMQEDSRYVERDRSEGDSAFGARCV 826
Query: 919 ALS-NPH--------YGSGGCVIS-----TVKEENSFIKLSFKVQQEPDLSDLVHLQDDT 964
+ P YGS G V++ T ++ + + KV QEP LQ
Sbjct: 827 YIGPQPKSKKSQMDVYGSCGTVVTAGQHDTTTQQGDQMTVRLKVFQEPLRLPAELLQFAA 886
Query: 965 VYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVG-- 1022
N+ VA L I P L+ S I+ S + G++ +GL +KF+ + VG
Sbjct: 887 QRNWTALPQVAISLDILPHTLTSICSS--IVTSPQFGSR--ELGLCLKFTGRCIAKVGYA 942
Query: 1023 -----------------FTRRDE--------------------------TTKKWFYTEQV 1039
F R ++ + W+++
Sbjct: 943 KLVQHSLNPWYVGNKDIFARMEKDMEDIGYHLEMGEKGDFAGNSSSNRGGSGTWYFSRDA 1002
Query: 1040 VTLIKNYMKQF------------------PEVF--GFLKDHSSDDIYLRDDVFPHQGEQR 1079
LI++Y+K+F P+ F G +D DD+ + F
Sbjct: 1003 QELIRDYVKRFRPLIQYIEAGGVNSNSVEPQQFLTGPWRDRDVDDVLTEIETF------- 1055
Query: 1080 VAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLF-VKPNKLYI 1138
I S L+E P A +++ SL E + K+++L V ++LY
Sbjct: 1056 --LIESGLRETPMITATEEAFPQQLLEQLEASLQEQQ----NRSFKELSLRQVSRSQLYF 1109
Query: 1139 P--KPTLDKLCPDP---DTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDV 1193
P + + L P P + F L RV N R VP G +GTI+ ++ + +A ++
Sbjct: 1110 PVTRSSCGHLVPLPLPQEQTFYLGSRVANCRATGIVPFGTQGTIVRLL--ASGREA--EI 1165
Query: 1194 VFDKPFPHGVKI--RCSESRGYRMPAQAMINL 1223
V+D PF G ++ R ++R A++ L
Sbjct: 1166 VYDTPFTGGTRLDGRLKDTRAAITKLSALLVL 1197
Score = 145 bits (367), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 90/127 (70%), Gaps = 2/127 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEKQ 59
MGVPKFFR+ +ER+P + ++ P DNLYLD+NGIIHNC+HPND D R TEK+
Sbjct: 1 MGVPKFFRWAAERFPSIITPFKD-SPPPVDNLYLDINGIIHNCTHPNDVDATRRSPTEKE 59
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ Q +F Y+E LF IQP+K F +A+DGVAPRAKMNQQR RR+R+ E + Q+A G
Sbjct: 60 MIQAMFIYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQRRYRAGYEMMIARQEALAMG 119
Query: 120 ERLPTEK 126
E +P EK
Sbjct: 120 EEVPEEK 126
>gi|154331043|ref|XP_001561961.1| putative 5'-3' exonuclease [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134059283|emb|CAM36982.1| putative 5'-3' exonuclease [Leishmania braziliensis MHOM/BR/75/M2904]
gi|449310628|gb|AGE92541.1| 5'-3' exonuclease [Leishmania braziliensis]
gi|449310652|gb|AGE92553.1| 5'-3' exonuclease [Leishmania braziliensis]
Length = 1513
Score = 447 bits (1151), Expect = e-122, Method: Compositional matrix adjust.
Identities = 360/1221 (29%), Positives = 567/1221 (46%), Gaps = 194/1221 (15%)
Query: 121 RLPTEKRF---DFITLKFCF----PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLE 173
R PTEK FI L+ F P+K F +A+DGVAPRAKMNQQR RR+R+ E V
Sbjct: 53 RSPTEKEMIQAMFIYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQRRYRAGYEMMVAR 112
Query: 174 QKAKEKGERLPTEK-RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWK 232
++A GE +P EK FDSNCITPGTPFM R+ + +YF+ +K++TD W+
Sbjct: 113 EEALAMGEEVPEEKDMFDSNCITPGTPFMVRVSTEFQYFITMKLSTDP---------AWQ 163
Query: 233 DVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFS 292
+I SGH+ PGEGEHKI+D+IR K +P+Y+PN HC+YGLDADL+ML L THEP+F
Sbjct: 164 RCEIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDADLVMLALATHEPHFV 223
Query: 293 LLREEVKFNTKSNKGGSQIVTPEET------------KFFLLHLSLMRDYLELEFGKLKE 340
LLRE V F S K + E +F LLH+S+ RDYL+LE
Sbjct: 224 LLREVVTFGPGSRKERERQEEDEAKGLVKDKAYHKADEFVLLHISVFRDYLQLEVKDYLA 283
Query: 341 PGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYI 400
S E IIDD+V M F IGNDF+P LP + I +G++P+L ++Y + L + + Y+
Sbjct: 284 KSKSSTKIDFERIIDDFVFMCFFIGNDFLPTLPTIGINDGSIPVLLRLYVDNLLSKNRYL 343
Query: 401 NEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDL 460
G ++ + E +L ++ +FE R + Q E + K + ++ + E+D
Sbjct: 344 THKGEIDWRNAEVWLNEVGKLEFETLRRR----QQEEAEYQKNRA---RRDPTHEVDTTS 396
Query: 461 AALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAK 520
A I + +++ YY ++ H +
Sbjct: 397 AMPITSI--------------LEFKQRYYGEK--------------------HGFVGGWD 422
Query: 521 VTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLK--YEM 578
+E +R E Y+ + W +HYYY G SW W++PH+YAP SD+ + ++ + +E+
Sbjct: 423 ANSEDMRRLREHYVEGLMWVMHYYYQGVPSWKWFFPHYYAPMASDLVNLPGISARVTFEV 482
Query: 579 GEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVV 638
G+PF P QQLLAVLP S +P+ Y +L+ +SP+ +Y PE D G + WE +V
Sbjct: 483 GKPFQPHQQLLAVLPPMSYLSMPKAYWSLLRSPSSPLAKYLPEHIVIDREGARAPWEGIV 542
Query: 639 LIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENH 698
LIPFIDE L+ A ++V+ ++ E+ + N +GP L + Y L F ++
Sbjct: 543 LIPFIDERTLLAAYESVQQNVSPEDAANNVNGPPLRFRYDGKMTPYELEDQMFGSLRNV- 601
Query: 699 AVEKPLYRDDIYVHP--NKLRKGLCQDVNLKL-YVTHFPTL--KHVQFTHKIENAKVKVF 753
R + Y P +K LC V++ + F TL K E V +F
Sbjct: 602 -----FVRRETYAFPPIDKFIPQLCPGVHVGTQQLEGFSTLQSKRDLIQTIFEAGVVTIF 656
Query: 754 QQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRIS--F 810
+P++N+S+I+ ++D + S+ QVA ++GK + + +PH RV V I+ +
Sbjct: 657 GRPTKNDSLILQMRDFFKAKSIDQVA-TLVGKEVLVGFPHYKRARVACVKDVHKCITALY 715
Query: 811 DKN---SGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFF 867
K SG + +D AF ++ ++LG+ + VLVY +
Sbjct: 716 SKEGTFSGTEEHKNNRDESAAFLREAETHARFMKSQLGLAVEQVHVLVYVHRFNGMQ--V 773
Query: 868 GPRGKVTQQRTFIRSTVTY-AYQSAVLNLQQARESLEY-----KTIDEIFYPGCQCFALS 921
+G++ +R F + Y + L RE Y D F G +C +
Sbjct: 774 TRKGRI--ERHFSTTWTCYPIHLICTLESIDMREDSRYVERYRSEGDSAF--GARCVYIG 829
Query: 922 -NPH--------YGSGGCVISTVKEENSF-----IKLSFKVQQEPDLSDLVHLQDDTVYN 967
P YG G V++T + + + + + KV QEP LQ + N
Sbjct: 830 PQPKSKKSQVDVYGCCGTVLTTGQHDTATQQGDQLTVRLKVFQEPLRLPEELLQFAALRN 889
Query: 968 YLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVG----- 1022
+ VA+ L I P L+ S ++ S + G++ +GL +KFS + VG
Sbjct: 890 WTALPQVAASLDILPHTLTSICSS--LVTSPQFGSR--ELGLCLKFSGRCIAKVGYAKLV 945
Query: 1023 --------------FTRRDETTK--------------------------KWFYTEQVVTL 1042
F+R ++ T+ W+++ L
Sbjct: 946 QHNFNPWYVGNKDIFSRMEKDTEDIGYHLEMGEKGDFAGNSSNNRGGSGTWYFSRDAQEL 1005
Query: 1043 IKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQR---VAQIV---------SWLKEQ 1090
I +Y+K+F + +++ + L F G+ R A+++ S L+E
Sbjct: 1006 IHDYVKRFRPLIQYIEAGGVNSRSLEPQQF-LTGKWRDKDAAEVLTDIETFLIESGLRET 1064
Query: 1091 PHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLF-VKPNKLYIPK--PTLDKLC 1147
P A +++ +SL E + K+++L V N+LY P + L
Sbjct: 1065 PMITATEEAFPQQLLEQLEMSLQEQQ----SRSFKELSLRQVSRNQLYFPVTYSSSGHLV 1120
Query: 1148 PDP---DTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVK 1204
P P + F L RV N R TVP G +GTI+ ++ + +A +VV+D PF G +
Sbjct: 1121 PLPLPKEQTFSLGSRVTNCRATGTVPFGMQGTIVRLL--ASGREA--EVVYDTPFTGGTR 1176
Query: 1205 I--RCSESRGYRMPAQAMINL 1223
+ R ++R A++ L
Sbjct: 1177 LDGRLKDTRAAITKLSALLVL 1197
Score = 144 bits (364), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 90/127 (70%), Gaps = 2/127 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEKQ 59
MGVPKFFR+ +ER+P + ++ P DNLYLD+NGIIHNC+HPND D R TEK+
Sbjct: 1 MGVPKFFRWAAERFPSIITPFKD-SPPPVDNLYLDINGIIHNCTHPNDVDATRRSPTEKE 59
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ Q +F Y+E LF IQP+K F +A+DGVAPRAKMNQQR RR+R+ E V ++A G
Sbjct: 60 MIQAMFIYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQRRYRAGYEMMVAREEALAMG 119
Query: 120 ERLPTEK 126
E +P EK
Sbjct: 120 EEVPEEK 126
>gi|324502555|gb|ADY41124.1| 5'-3' exoribonuclease 2 [Ascaris suum]
Length = 934
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 277/756 (36%), Positives = 379/756 (50%), Gaps = 154/756 (20%)
Query: 1 MGVPKFFRYISERYP-----CLSEVVREYQ---IP-----------EFDNLYLDMNGIIH 41
MGVP FFR++S +YP + E R+ IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVNAVEEKPRDVDGNLIPVRTTEPNPNFQEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP +N P + +E ++F IF YI+ +F +++P++L +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCTHP-ENRPAPK-SEDEMFALIFEYIDRIFAVVRPRRLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FR++KEA Q+ E ERL E F P K
Sbjct: 119 FRASKEAAEKLQQIAEVRERLEKE--------GFPLPPK--------------------- 149
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
KE+GE FDSNCITPGTPFM RL LRY+V +++ D
Sbjct: 150 ---------------KEEGE------HFDSNCITPGTPFMARLADALRYYVHMRLNNDP- 187
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W ++ VILS PGEGEHKIMD+IR ++ P ++PN HCL G DADLIM
Sbjct: 188 --------GWANIEVILSDANAPGEGEHKIMDFIRRQRASPSHDPNTVHCLCGADADLIM 239
Query: 282 LGLCTHEPYFSLLREEVKFN--------------TKSNKGGSQIVTPE--------ETKF 319
LGL THEP F+++REE N K +G +Q E ET F
Sbjct: 240 LGLATHEPNFNIIREEFIPNQQRPCDLCGQYGHEVKDCQGLAQDEAAECDANPMQKETNF 299
Query: 320 FLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN 379
+ L ++R+YLE E + S PF +E IDDWV M F +GNDF+P+LP L I
Sbjct: 300 IFVRLPVLREYLEREL----QMNNSSVPFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRE 355
Query: 380 GALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK-YADIQYLEG 438
A+ L ++Y++++ + GY+ G + + R +K L L + E F+ + ++Q+ E
Sbjct: 356 NAIDRLIRLYKDMVAKVGGYLTNQGDVYMDRVQKILNGLGEVEDEIFKNRQQKELQFRER 415
Query: 439 KMGKKFSD------VFHKEKSKEMDPDLAALIKATDDD----YDDGTEEVLNYANY---- 484
K+ + + + + P + + D D + + Y N
Sbjct: 416 NKAKRRRERAATTPAYIPVRGSLLAPQANGPVSFSGADTRRLARDARVQAMEYQNASSKA 475
Query: 485 -----------------------EEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKV 521
EE Y DE W T + K YY K +
Sbjct: 476 NTVVTTVQASGPRKRKMEDSDSEEEVY--DEVRLWETGW-------KERYYRSKFEVDGN 526
Query: 522 TNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEM-GE 580
A Y+ + W L YYY GCVSW+WY+P+HYAP+ SD S + E
Sbjct: 527 DIAFRHKVAWAYVEGLCWVLKYYYQGCVSWNWYFPYHYAPFASDFDTISQFKPDFSAHTE 586
Query: 581 PFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLI 640
PF P +QL+AV PAASK+ LPE +Q+LMT E SPI+++YPE+F DLNGKK W+ V L+
Sbjct: 587 PFKPLEQLMAVFPAASKKHLPESWQDLMTSEESPIIDFYPEDFQVDLNGKKYAWQGVALL 646
Query: 641 PFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
PF+DE +L++ + V L D ER RN GP ++
Sbjct: 647 PFVDEHRLLETLATVYDKLDDFERERNSRGPDRIFV 682
>gi|449019218|dbj|BAM82620.1| deoxyribonuclease [Cyanidioschyzon merolae strain 10D]
Length = 1527
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 401/1415 (28%), Positives = 600/1415 (42%), Gaps = 290/1415 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP+F+R++SERYP ++ V P DN YLDMNGI+HNC+ +N P +++ I
Sbjct: 1 MGVPRFYRWLSERYPLINGPVSRSNAPPVDNFYLDMNGILHNCARSAEN-PLGGRSDEDI 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ + +YI++L +IQPK+L F+A+DGVAPRAKMNQQR RR+R+A E + + + ++G
Sbjct: 60 YWESCNYIDMLVTLIQPKRLLFLAVDGVAPRAKMNQQRARRYRAATALEKVAETSHQRGN 119
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+R R+ EA
Sbjct: 120 TT--------------------------------------QRLRTESEAG---------- 131
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
++ FDSNCITPGT FM L + L Y+V +K+ +D+ W+D+ VI+SG
Sbjct: 132 ----PDRVFDSNCITPGTTFMHGLSRALLYYVAVKLESDR---------SWQDLEVIVSG 178
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
E PGEGEHKIM+YIR +K + PN RHC+YGLDADLI LGL THEP+F LLRE++ F
Sbjct: 179 AEVPGEGEHKIMEYIRQLKEQKRMPPNTRHCIYGLDADLIFLGLVTHEPHFFLLREKIDF 238
Query: 301 NTKSNKGGSQIVTPEET------KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENII 354
K + VT + F LL L ++R+YL LEF L E + + +++E II
Sbjct: 239 QAAFRKVRFEKVTATKMDRDIRGDFELLSLGILREYLSLEFAYL-EKRLPAGVYNLERII 297
Query: 355 DDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGG-------YLN 407
DD+V + FL+GNDF+P+ P L I GAL + +Y+E+LP GY+ E +N
Sbjct: 298 DDFVFVAFLVGNDFMPHSPTLEIREGALNSILFLYKELLPRFGGYLTEATGKARNPKLIN 357
Query: 408 LKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKF----------------------- 444
R E L+KL + EK A + G G F
Sbjct: 358 FDRVEILLSKLGLLE-SYILEKRATV----GTRGTAFIWGTDSPNDHTAIWGFSSEPTAA 412
Query: 445 SDVFHKEKSKE--MDPDLAALIKATDDDYDDGTEEVLNY------------ANYEEYYYS 490
+ K++S DP A+L A + D D N +
Sbjct: 413 ATASKKQRSPSCTTDPTRASLAHANNPDPDSEAPSSSPADAAASVAPERSPGNGDAAELE 472
Query: 491 DEDEEWRTNFFSEFGQHKTD-------------YYHYKL--DYAKVTNEVLRDQAECYIR 535
E W + + D YYH KL DY V R Y+
Sbjct: 473 PEIPLWDEEALAVALEDAADAQKLQRMLSYKRRYYHEKLGIDYDHDAAAV-RRICRSYLE 531
Query: 536 AIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHL--NLKYEMGEPFLPFQQLLAVLP 593
AI W L YY NG SW W+YP+HYAP+ SD+ L ++ E G PFLP QQLLAVLP
Sbjct: 532 AIVWTLEYYLNGVASWRWFYPYHYAPFCSDMVGLQALAQEIRLEQGTPFLPLQQLLAVLP 591
Query: 594 AASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMD 653
S LP Y LMT +SP+ + YP + A D+ GK+ +WE +VL+PF+DE +L A+
Sbjct: 592 PRSAWCLPPAYAKLMTDTSSPLADLYPSQVAIDMQGKRNEWEGIVLLPFMDENRLFAALA 651
Query: 654 AV-EHLLTDEERSRNRHGPMLVYTY------SN------VNLGTALAPDYFP-------- 692
+V LT E+ RN G ++ Y SN ++ + + FP
Sbjct: 652 SVPPDALTPTEQERNHLGSCILLRYRPQEGTSNEHMDAVLSAASGIGSSPFPSRMARSLS 711
Query: 693 AINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKV 752
A + ++ R + P R + V P+L TH EN + V
Sbjct: 712 ACVQMESLSLQHERGFVPRLPPGTRPAADKAVG-------HPSLLRRDVTHCFENVAIDV 764
Query: 753 FQQPSRNESIIIVQDKVQ-------------------------VPSLKQVADQILGKTIF 787
F PSR ES II + Q V SL Q ++ +
Sbjct: 765 FGVPSRLESCIICMETPQAWHEAHAAQACANAFLSGVADAGAAVSSLDQSRTGLM-VPVH 823
Query: 788 INYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVD 847
+ +P ++AV + R+++D N + ER D Q F+ + ++ + G+
Sbjct: 824 MGFPWQSPALLEAVESATERVTWDANKALIIER--NDPQR-FRQTDTTLLAELLQRRGIC 880
Query: 848 IGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKTI 907
+ ++G+ R G VT T + +A S E K
Sbjct: 881 LDKNS--LHGR--VRRIVEIAAGGGVTDAATAESFPLELIEAIDSKEGNEASSSTELKPG 936
Query: 908 DEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQE---------------- 951
D + Y G + N Y GC V + KL+ K +Q
Sbjct: 937 DTVIYVGRRHG--ENARY--FGCRAQVVAIRAA--KLARKRKQASDDQVDTQVVIRVLEP 990
Query: 952 -----PDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRH- 1005
P L ++V D Y LP + + ++ RF G + +H
Sbjct: 991 PLVPIPALKEIVARNDAVQYAPLP--VALRRAGLEGVISLRFAG--MLTGKVRCRIPKHE 1046
Query: 1006 --------NIGLNIKFSRKNEEVVGFTRRDETTKK------------------WFYTEQV 1039
N+GL ++F R+ V G+ ++ F E
Sbjct: 1047 RFGDLLEVNLGLGLRFKREKLVVPGYVVYRPVQERPAGGTTAGNAPQASEGTFLFAPEPT 1106
Query: 1040 VTLIKNYMKQFPEVFGFLKD----HSSDDIYLRD-DVF-PHQGEQRVAQIVSWLKEQPHA 1093
L+++Y + FP + + + D+ L+ ++F Q VA+I ++L+ A
Sbjct: 1107 ARLLRSYHETFPGLLERMDEIVTKRGDGDLVLKAVELFGTAQWPDMVARIQTFLRSLESA 1166
Query: 1094 KAEVRPCGAAVVDAKVVSLIEHAVD--TCEKVEKQITLFVKPNKLYIP--KPTL----DK 1145
+ + + V+ +V+ I+ + CE+ P + P PTL +
Sbjct: 1167 RLPLVRVTSRVLTQDIVTDIQTQIQRIACER-SASFPAETPPVEAATPPTAPTLVCLRSE 1225
Query: 1146 LCPD-------------PDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYD 1192
+ P P + ++L DRV+ + VP G RG ++GI D
Sbjct: 1226 VLPGFPAVATSTSGLVTPFSAYELGDRVLYVGRSGAVPFGARGVVVGIHPPSRE----VD 1281
Query: 1193 VVFDKPFPHGVKI--RCSESRGYRMPAQ-AMINLS 1224
VVFD+ F G + RC G + A+ ++NLS
Sbjct: 1282 VVFDQDFIGGSDLQGRCRGCAGKTLDAETTLLNLS 1316
>gi|268533146|ref|XP_002631701.1| C. briggsae CBR-XRN-2 protein [Caenorhabditis briggsae]
Length = 901
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 266/723 (36%), Positives = 376/723 (52%), Gaps = 135/723 (18%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP-----------EFDNLYLDMNGIIH 41
MGVP FFR+++++YP V ++P EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTKKYPATVVNANEDRQRGVDGRRVPVDCTQPNPNFQEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP D P + E ++F IF YI+ +F +++P++L +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEDR-PAPK-NEDEMFALIFEYIDRIFSIVRPRRLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FR++KE + +KA A + +QR R
Sbjct: 119 FRASKE---MAEKA-------------------------------------ASIEEQRRR 138
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
E + QK K++ E FDSNCITPGTPFM RL LRY++ ++T D
Sbjct: 139 LI---AEGIAVPQKKKDE-----EEAHFDSNCITPGTPFMARLADALRYYIHDRVTNDP- 189
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W ++ +ILS PGEGEHKIMDYIR + P ++PN HCL G DADLIM
Sbjct: 190 --------AWANIEIILSDANVPGEGEHKIMDYIRKQRGNPAHDPNTVHCLCGADADLIM 241
Query: 282 LGLCTHEPYFSLLREEVKFNT--------------KSNKG-------GSQIVTPE--ETK 318
LG+ THE F+++REE N K +G G + PE E
Sbjct: 242 LGIATHEANFNIIREEFVPNQPRACELCGQYGHELKECRGAENDTDLGDEYCKPEQREKN 301
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
F L + ++R+YLE E L F F++E +DDWV + F +GNDF+P+LP L I
Sbjct: 302 FIFLRIPVLREYLEKEMAMPN----LPFQFNLERALDDWVFLCFFVGNDFLPHLPSLEIR 357
Query: 379 NGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQ-YLE 437
GA+ L K+Y+E++ + GY+ + G L R E + L + E F+ + D + + E
Sbjct: 358 EGAIDRLIKLYKEMVYEMKGYLTKDGIPELDRVEMIMRGLGKVEDEIFKRRQQDEERFKE 417
Query: 438 GKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWR 497
+ KK + K K P I TD+D + + L + ++E YY R
Sbjct: 418 NQKNKKARMQQYGRKRKAEQP-----IIITDEDEEPKDDIRLYESGWKERYY-------R 465
Query: 498 TNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPH 557
F + G D+ H ++ +A Y+ + W L YYY GC SW WY+P+
Sbjct: 466 AKF--DVGSDDVDFRH-RVAWA-------------YVEGLCWVLRYYYQGCSSWDWYFPY 509
Query: 558 HYAPYISDIKDFSHLNLKYEM-GEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPIL 616
HYAP+ SD + + +PF P +QL++V PAASK+ LP +Q LMT + SPI+
Sbjct: 510 HYAPFASDFETVGEFKPDFTRPTKPFNPLEQLMSVFPAASKQHLPVEWQKLMTEDESPII 569
Query: 617 EYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
+ YP +F DLNGKK W+ V L+PF+DE +L++ + +V LTDEE+ RN GP ++
Sbjct: 570 DLYPADFRIDLNGKKYAWQGVALLPFVDEQRLLETLKSVYPTLTDEEKYRNTRGPNRIFI 629
Query: 677 YSN 679
N
Sbjct: 630 GRN 632
>gi|195107132|ref|XP_001998170.1| GI23821 [Drosophila mojavensis]
gi|193914764|gb|EDW13631.1| GI23821 [Drosophila mojavensis]
Length = 793
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 272/730 (37%), Positives = 385/730 (52%), Gaps = 127/730 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE------------YQIP--------EFDNLYLDMNGII 40
MGVP FFR++S++YPC+ E Y+ P EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSKKYPCVIIECNENKKTDAETGKTIYEDPTLPNPNGVEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C+HP D P + E+++ IF I+ LF +++P+KL +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCTHPEDK-PAPK-NEEEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AKE EKR + ++ N+
Sbjct: 119 RFRAAKET---------------IEKRIEIERIR---------------------NELLT 142
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
R + E KEKGE FDSNCITPGTPFM RL + L Y++ +I T+
Sbjct: 143 RGCKLPPE--------KEKGE------HFDSNCITPGTPFMDRLSKCLHYYIHHRINTNP 188
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
WK + VILS PGEGEHKIMDYIR +++PD++PN H L G DADLI
Sbjct: 189 ---------AWKRIQVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLI 239
Query: 281 MLGLCTHEPYFSLLREEV------------KFNTKSNK-------GGSQI-VTPE----- 315
MLGL THEP F+++REE +F + +K G S TP+
Sbjct: 240 MLGLATHEPNFTIIREEFLPNKPRPCDVCNQFGHEMDKCVGLSAVGSSNCNFTPDIPIGA 299
Query: 316 ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
E KF + LS++R+YL+ L+ P L F + E ++DDWV M F +GNDF+P+LP L
Sbjct: 300 EVKFIFVRLSVLREYLK---KTLQMPN-LPFSYDFERVLDDWVFMCFFVGNDFLPHLPSL 355
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQY 435
I GA+ L ++Y++ + GY+ + G +NL R + +T L + + + F+++ Q
Sbjct: 356 EIREGAVDRLVELYKKCVYKTKGYLTDSGEVNLDRVQLIMTDLGNVEDQIFKDRQRREQQ 415
Query: 436 LEGKMGKKFSDVFHKEKSKEMDPDLAALIKA-TDDDYDDGTEEVLNYANYEEYYYS-DED 493
+ + ++ ++ E+S + KA +Y V + S D+D
Sbjct: 416 FKARQKRENNNFKALEQSVFGPSAVGPAAKAQIITNYKQEAASVRMGSKRSSTAASLDDD 475
Query: 494 EE-------WRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYN 546
EE W F K YY K D + + A Y+R + W L YYY
Sbjct: 476 EENHDEVRLWEDGF-------KNRYYESKFDVSPDNLQFRYAVALQYVRGLCWVLKYYYQ 528
Query: 547 GCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQ 605
GC SW+WY+P+HYAP+ SD + L+ +E G +PF P +QL+ V PAAS +P+P+
Sbjct: 529 GCASWNWYFPYHYAPFASDFVNIQGLSTIFEKGTKPFNPLEQLMGVFPAASSSHVPKPWA 588
Query: 606 NLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERS 665
LM+ +S I+++YPE+F DLNGKK W+ V L+PF+DE +L KA+ + LT+EE
Sbjct: 589 ELMSKPDSTIIDFYPEDFKIDLNGKKFAWQGVALLPFVDENRLFKALIPLHSHLTEEEVK 648
Query: 666 RNRHGPMLVY 675
RN+ G +Y
Sbjct: 649 RNKKGENNLY 658
>gi|328697664|ref|XP_003240404.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Acyrthosiphon pisum]
Length = 958
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 275/748 (36%), Positives = 384/748 (51%), Gaps = 148/748 (19%)
Query: 1 MGVPKFFRYISERYP-----CL---SEVVREYQIP-----------EFDNLYLDMNGIIH 41
MGVP FFR+++ +YP C+ S V QIP EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTRKYPSVIVNCIEQKSTDVNGEQIPIDSTSPNPNGIEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP +N P + E ++ IF I+ LFR+++P+K+ +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCTHP-ENKPAPK-DEDEMMVAIFECIDRLFRIVRPRKVLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FR++KE EK E L R
Sbjct: 119 FRASKE-------TTEKTEEL-------------------------------------AR 134
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
++ EA + K+KGE FDSNCITPGTPFM +L L Y+V ++ D
Sbjct: 135 VRKNLIEAGAILPPEKQKGE------HFDSNCITPGTPFMDKLSACLHYYVHDRLNNDP- 187
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
WK + VILS PGEGEHKIMD++R +++P+++PN +H L G DADLIM
Sbjct: 188 --------GWKGIKVILSDANVPGEGEHKIMDFVRKQRAQPNHDPNTQHVLCGADADLIM 239
Query: 282 LGLCTHEPYFSLLREEVKFN--------------TKSNKG--------GSQIVTPEETKF 319
LGL THEP F+++REE K N K +G GS I + +F
Sbjct: 240 LGLATHEPNFTIIREEFKPNQPKPCDMCGQMGHEIKDCQGLEREAFNDGSTIEFSADVQF 299
Query: 320 FLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN 379
+ L+++R+YLE E L+ P L F + E +DDWV M F +GNDF+P+LP L I
Sbjct: 300 IFVRLNVLREYLERE---LEMPN-LPFKYEFERALDDWVFMCFFVGNDFLPHLPSLEIRE 355
Query: 380 GALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK------YADI 433
A+ L +Y++ + G++ G +NL R + ++ L + E F+++ +AD
Sbjct: 356 NAIDRLVSLYKKTVYKTGGFLTASGDVNLDRVQLIMSDLGMAEDEIFKKRQQTEKMFADR 415
Query: 434 QYLEGKMGKKFSDVFHKEKS----------KEMDPDLAALIKATDDDYDDGTEEVL---- 479
L+ + K+ D + KS P+ A I D+ + +
Sbjct: 416 NKLKKRREKQ--DKLMRSKSAPNFVLGGQYAPSAPNTAFSISNPRQTVDEMRRQSVGNEN 473
Query: 480 ----------NYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQ 529
N ++ EE DE W F K YY K D + TN R Q
Sbjct: 474 NQGVKRKRDDNESSDEEKETPDEVRLWEDGF-------KERYYESKFDVDR-TNSGFRHQ 525
Query: 530 AEC-YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGE-PFLPFQQ 587
Y+R + W L YYY GC SW WY+P+HYAP+ SD + S ++ K+E G PF P +Q
Sbjct: 526 VALEYVRGLCWVLQYYYQGCPSWKWYFPYHYAPFASDFLNISAVSTKFEKGTVPFRPLEQ 585
Query: 588 LLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVK 647
L++V PAAS +P+P+ LM+ SPI+++YP +F DLNGKK W+ V L+PF++E +
Sbjct: 586 LMSVFPAASSNHVPQPWAILMSDPESPIIDFYPVDFKIDLNGKKFAWQGVALLPFVEEAR 645
Query: 648 LIKAMDAVEHLLTDEERSRNRHGPMLVY 675
L KA++ LLT EER RN G +Y
Sbjct: 646 LHKALEPYYDLLTSEERRRNVKGMDRLY 673
>gi|443895364|dbj|GAC72710.1| predicted hydrolases or acyltransferases [Pseudozyma antarctica
T-34]
Length = 1939
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/432 (50%), Positives = 273/432 (63%), Gaps = 76/432 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFR++SERYP +S+++ E +IPEFDNLYLDMNGIIHNCSHPNDND FRITE QI
Sbjct: 150 MGIPKFFRFMSERYPLISQLIEENKIPEFDNLYLDMNGIIHNCSHPNDNDASFRITETQI 209
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F +F YIE LF I+PKK+FF+A+DGVAPRAKMNQQR RRFR+AKEA+ +++KA+ +GE
Sbjct: 210 FLAVFAYIEHLFHKIKPKKVFFLAVDGVAPRAKMNQQRSRRFRTAKEAKEIKEKAERRGE 269
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
LP E+ FD C FM AK++QQ
Sbjct: 270 ILPDEEAFD----SNCITPGTPFM--------AKLSQQ---------------------- 295
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
L YF+ KIT D W++V VILSG
Sbjct: 296 ---------------------------LEYFIAKKITEDA---------DWRNVQVILSG 319
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
H+ PGEGEHKIM+YIR K++P YNPN+RHCLYGLDADLIMLGL +H+P+F LLREEV+F
Sbjct: 320 HDVPGEGEHKIMEYIRLCKAQPGYNPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVQF 379
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
+ GS E FFLLHLSL R+YL+LEF L+ L FP+ E IIDD++L+
Sbjct: 380 GPRRKSKGSL----ESQNFFLLHLSLFREYLDLEFQDLRSS--LPFPYEFERIIDDFILL 433
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
+GNDF+P+LP LHI GA+ LL+ +Y+++LP GY+NE G+L R E L +L +
Sbjct: 434 NIFVGNDFLPHLPGLHINEGAMDLLFGIYKQILPVAGGYLNESGHLRTDRLELVLAELRN 493
Query: 421 FDFEQFREKYAD 432
F+ EQF Y D
Sbjct: 494 FEMEQFERDYGD 505
Score = 328 bits (842), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 238/786 (30%), Positives = 397/786 (50%), Gaps = 79/786 (10%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
D +E++R ++ + K DYY KL++ +E + A YI +QW LHYYY+G S
Sbjct: 683 DPEEDYRKRLDAQMTEWKKDYYKQKLEFDYSNDEAMSKLAFRYIEGLQWVLHYYYDGVAS 742
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
W W+Y +HYAP ISD+K+ + ++E+G+PF PF QL+ VLPA S + +P +++LMT
Sbjct: 743 WGWFYDYHYAPKISDLKNVGQMKFEFELGKPFRPFDQLMGVLPALSNQHIPTAFRDLMTD 802
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
NSPI+++YP F DLNGKKQDWEAVV IPFIDE +L++A+D E L EER RN G
Sbjct: 803 PNSPIIDFYPSNFEADLNGKKQDWEAVVKIPFIDEKRLLEALDKREVYLGIEERKRNGFG 862
Query: 671 PMLVYTY---SNVNLGTALAPDYFPAINENHAVEKPL---YRDDIYVHPNKLRKGLCQDV 724
+TY + ++L P FP + AV K D ++ L KGL + V
Sbjct: 863 HSREFTYNEDGELFFPSSL-PGTFPDLVHCRAVVKNFNLPTLDGLH-----LVKGLTKGV 916
Query: 725 NLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQIL 782
L + + FP+LK + ++ + V +FQ S+ S+++ +++ + + +A+ ++
Sbjct: 917 ELGVRALAGFPSLKTLPHYGRLGHHGVNIFQSDSKGVSMVVTIENAYEDAKTEAIANAMI 976
Query: 783 GKTIFINYPHLIEIRVQAVATKDSRISFDKN-SGPVFERAAKDMQDA----FQLSKKSIT 837
GK F+N+P L E V V DS ++ G + A Q A FQ +
Sbjct: 977 GKRAFLNWPFLTEGLV--VGVSDSLFRYEMGIVGGQQKVIATPHQSATLSDFQRKAERAE 1034
Query: 838 DGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS-------TVTYAYQS 890
Y ++GV IG+ +VLV+ +P++ K FI+ + A Q
Sbjct: 1035 YQYSKRMGVLIGDVDVLVHIRPLKGLKRL--------DDGAFIKDYEETSKKEIDQAVQV 1086
Query: 891 AVLNL--QQAR--ESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSF 946
V N+ AR ES K I E + + F L YG+ V+ + + + I+++F
Sbjct: 1087 TVTNVVHDDARFLES-PAKPIREEYPDKTKVFFLGANAYGTPAHVVGST-DASLAIEVAF 1144
Query: 947 KVQQEPDLSDLVHL-QDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRH 1005
Q + + L +L Y+PSY VA K I+ L L++ T S+ + + +
Sbjct: 1145 FPNQAKENAHLRNLVASRARVQYMPSYHVAKKCGITSLALAKLTSSMMLAWKDQ----KV 1200
Query: 1006 NIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDI 1065
N+GL++KF K E+V+G++R+ + W ++++ + L+K Y++ FPE+ L S D+
Sbjct: 1201 NVGLSLKFEGKGEKVLGYSRK--SANGWEFSDKTLELVKEYVQTFPEIATMLSHKSGVDV 1258
Query: 1066 YLRDDVFPH-QGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEH--------- 1115
++ Q ++++ ++ +W+K + E P A + V IE
Sbjct: 1259 TRATQIWDESQVDEKMTELKAWIKAKGVRDLETVPLYAEQLSKDTVQQIEAFTARLVDTR 1318
Query: 1116 -AVDTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDP----DTKFKLFDRVVNIRDCYTVP 1170
A+ +V++ +F+K IP+ L K P +F+L DRV+ ++D VP
Sbjct: 1319 TAIGAASQVKR---VFIKG----IPRTALLKPNHAPFRLQAQRFELGDRVIMVQDSGNVP 1371
Query: 1171 LGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGER 1228
L RG ++ I +VVFD PF G + RC+ +G + +++NL+ +
Sbjct: 1372 LSARGVVVSINSNS------LEVVFDVPFLSGTTLGDRCAPYKGATVSFVSVLNLTQPQF 1425
Query: 1229 LCGNSN 1234
+C ++
Sbjct: 1426 VCAGTS 1431
>gi|302506324|ref|XP_003015119.1| hypothetical protein ARB_06879 [Arthroderma benhamiae CBS 112371]
gi|291178690|gb|EFE34479.1| hypothetical protein ARB_06879 [Arthroderma benhamiae CBS 112371]
Length = 1302
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/441 (48%), Positives = 283/441 (64%), Gaps = 77/441 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE+ ++KA +
Sbjct: 65 -------FNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRARRFRTALDAELAKEKAIK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YF+ K++ D W+ V V+L
Sbjct: 118 EGVEMPKEDAFDSNCITPGTEFMAKLTKQLKYFINKKVSEDA---------EWQGVEVVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P+Y+PNMRHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S K ++ E F+LLHL ++R+YLELEF +LK G L FPF +E IIDD++
Sbjct: 229 TFGRQSQKKSKEL---EHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++KVY++VLP L GY+NE G +N++R LT L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAWMFKVYKDVLPKLGGYVNEHGTINMERLRTLLTAL 345
Query: 419 ASFDFEQFREKYADIQYLEGK 439
+ +F F +Y+D ++L+ K
Sbjct: 346 SDVEFRFFEAEYSDARWLKSK 366
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 245/751 (32%), Positives = 385/751 (51%), Gaps = 59/751 (7%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F K YY K + E +R E Y++ +QW L YYY G SW W+Y +HYAP
Sbjct: 506 KFQDWKDKYYKGKFGWGLENTEEMRKLTENYVQGLQWVLFYYYRGVASWPWFYRYHYAPM 565
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISDI ++ +++G+PF PFQQL+ VLP SK+++P + LMT +SPI+++YP +
Sbjct: 566 ISDIHLGLGADVDFKLGQPFFPFQQLMGVLPDRSKKIVPVAFHGLMTSPDSPIIDFYPRD 625
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NVN 681
F D+NGKK +WEAVV IPFI+E +L+KAM EHLLT EE++RN G L +TYS +V
Sbjct: 626 FELDMNGKKMEWEAVVKIPFIEEERLLKAMATKEHLLTPEEKARNTFGVTLKFTYSPDVE 685
Query: 682 -LGTALAPDYFPAINENHAVEK-----PLYRDDIYVHPNKLRKGLCQDVNLKLYVTH-FP 734
L + P FP ++ +E + D YV GL + V + + FP
Sbjct: 686 FLYPSSLPGIFPDVSRCRCIENVFELPTMEGLDPYV-------GLVEGVKIGAEALYGFP 738
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLI 794
+L+ +Q T ++ V VFQQ SRNES+++ ++ A LGK + + YP L
Sbjct: 739 SLQTLQQTGQLGFHGVCVFQQESRNESMVVTISDPEIGGNTADAKTKLGKRVHVGYPFLQ 798
Query: 795 EIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLS----KKSITDGYYTK-LGVDIG 849
E +V V D + + G E Q+S K + YY+K LG+ IG
Sbjct: 799 EAKV--VCVSDELFDYVQVDGE--EHVVPIPHTPTQISQWKKKAEKIESYYSKRLGMVIG 854
Query: 850 NTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQ------ARESL 902
+ E +V + ++ K P G ++ T I T YA Q V ++ RE++
Sbjct: 855 DVETIVRVEMLKGLKK--TPDGATVKEFTEIPGVETEYAAQLIVDSVMSEDLRFIEREAV 912
Query: 903 EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQ 961
I+E F G + F L +YG+ V T E+ L V+ +EP+ L
Sbjct: 913 ---PIEEEFPEGARAFFLGEYNYGA--PVHVTGHEDGKLSGLLSAVKGKEPEFGREHVLN 967
Query: 962 DDTVYNYLPSYTVASKLSISPLLLSRFTGSIFI-IDSTEEGAKRHNIGLNIKFSRKNEEV 1020
+ + Y PS+ +A L +SPL L++ T S + +D T R N+GLN+KF K +V
Sbjct: 968 AEKLSKYTPSFAIARNLRLSPLTLAKITSSFSVNMDGT-----RVNLGLNLKFEAKKLKV 1022
Query: 1021 VGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQR 1079
+G++RR + W ++E+ + L+++YM +FP+ ++ D++ D +P +++
Sbjct: 1023 LGYSRRGNSG--WEFSERAIGLLQDYMIKFPDFIAGIQRKPQGDLFEPSDFYPADIAKEK 1080
Query: 1080 VAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE----KQITLFVKPNK 1135
+ +I +WLK E P A +D+ +V IE + D + Q V N
Sbjct: 1081 IKEIQAWLKSIESKSFERVPLEAEQLDSSIVQAIEKSADELSQSRPSPVAQKIRGVPRNA 1140
Query: 1136 LYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVF 1195
L P +L + F+L DRV+ +D VP+ RGT++G+ + TS + + DV+F
Sbjct: 1141 LLKPADAEHRLN---NQHFQLGDRVLYAQDSGKVPIASRGTVVGLTR--TSRNLLLDVLF 1195
Query: 1196 DKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
D F G + RCS RG +P+ +++NL+
Sbjct: 1196 DVSFMSGTTLSDRCSPFRGSTVPSSSVLNLT 1226
>gi|343426938|emb|CBQ70466.1| probable KEM1-multifunctional nuclease [Sporisorium reilianum SRZ2]
Length = 1481
Score = 428 bits (1101), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/432 (50%), Positives = 274/432 (63%), Gaps = 76/432 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFR++SERYP +S+++ E +IPEFDNLYLDMNGIIHNCSHPNDND FRITE QI
Sbjct: 1 MGIPKFFRFMSERYPLISQLIEENKIPEFDNLYLDMNGIIHNCSHPNDNDASFRITETQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F +F YIE LF I+PKK+FF+A+DGVAPRAKMNQQR RRFR+AKEA+ +++KA+ +GE
Sbjct: 61 FLAVFAYIEHLFHKIKPKKVFFLAVDGVAPRAKMNQQRSRRFRTAKEAKEIKEKAERRGE 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
LP E+ FD C FM AK++QQ
Sbjct: 121 VLPEEEAFD----SNCITPGTPFM--------AKLSQQ---------------------- 146
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
L YF+ KIT D W++V VILSG
Sbjct: 147 ---------------------------LEYFIAKKITEDA---------DWRNVQVILSG 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
H+ PGEGEHKIM+YIR K++PDYNPN+RHCLYGLDADLIMLGL +H+P+F LLREEV+F
Sbjct: 171 HDVPGEGEHKIMEYIRLSKAQPDYNPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVQF 230
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
+ GS E FFLLHLSL R+YL+LEF L+ L FP+ E IIDD++L+
Sbjct: 231 GPRRKSKGSL----ESQNFFLLHLSLFREYLDLEFQDLRSS--LPFPYEFERIIDDFILL 284
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
+GNDF+P+LP LHI GA+ LL+ +Y+++LP GY+NE G L R E L++L +
Sbjct: 285 NIFVGNDFLPHLPGLHINEGAMDLLFTIYKQILPVAGGYLNESGTLRTDRLELVLSELCN 344
Query: 421 FDFEQFREKYAD 432
F+ EQF Y D
Sbjct: 345 FEMEQFERDYGD 356
Score = 327 bits (838), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 237/769 (30%), Positives = 390/769 (50%), Gaps = 46/769 (5%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
D +E+++ ++ K DYY KL+ ++ + A YI +QW LHYYY+G S
Sbjct: 525 DPEEDYKQRLATQMAAWKKDYYKEKLEIDYNNDDDMSKLAFRYIEGLQWVLHYYYDGVAS 584
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
W W+Y +HYAP ISD+K+ + ++E+G+PF PF QL+ VLPA S + +P +++L+T
Sbjct: 585 WGWFYDYHYAPKISDLKNAGQMKFEFELGKPFRPFDQLMGVLPALSSQHIPTAFRDLVTD 644
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
NSPI+++YP F DLNGKKQDWEAVV IPFIDE +L++A+D E L EER RN G
Sbjct: 645 PNSPIIDFYPNNFEADLNGKKQDWEAVVKIPFIDEKRLLEALDKREVYLGIEERKRNGFG 704
Query: 671 PMLVYTYS---NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLK 727
+TY+ V ++L P FP + H + D ++ L KGL + V L
Sbjct: 705 HSREFTYNESEEVFFPSSL-PGTFPDL--VHCRARVSNFDLPTLNGLHLIKGLTKGVELG 761
Query: 728 L-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGKT 785
+ + FP+LK + ++ + V +FQ S+ S+++ +++ + + +A+ ++GK
Sbjct: 762 VRALAGFPSLKTLPHYGRLGHHGVNIFQSESKGVSMVVTIENAYEDAKTEAIAEAMIGKR 821
Query: 786 IFINYPHLIEIRVQAVATKDSRISFDKNSG--PVFERA--AKDMQDAFQLSKKSITDGYY 841
F+N+P L E V V+ R G V A + D FQ + Y
Sbjct: 822 AFLNWPFLTEGLVVGVSDNLFRYEMGMVGGHQKVIATAHQGATLSD-FQRKAERAECLYS 880
Query: 842 TKLGVDIGNTEVLVYGQPVESRKYF-FGPRGKVTQQRTFIRSTVTYAYQSAVLN-LQQAR 899
++GV IG+ +VLV+ +P++ K G K ++ + + + A Q V N +
Sbjct: 881 KRMGVLIGDVDVLVHIRPLKGLKRLDDGAFIKDYEESS--KKEIDQAVQVTVTNVVHDDA 938
Query: 900 ESLE--YKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPD--LS 955
LE K I E + + F L YG+ V+ + + + F Q + + L
Sbjct: 939 RFLESPAKPIREEYPDKTKVFFLGANAYGTPAHVVGSTDASLAIEVVFFPNQAKENAYLR 998
Query: 956 DLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSR 1015
DLV + NY PSY VA K I+ L L++ T S+ + + + N+GL +KF
Sbjct: 999 DLVSKRARV--NYYPSYQVAKKCGITSLALAKLTSSMMLAWKDQ----KVNVGLRLKFDA 1052
Query: 1016 KNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ 1075
K E+V+G++R+ W ++E+ V L+K Y++ FPE+ L S DI ++
Sbjct: 1053 KGEKVLGYSRK---LAGWEFSEKAVELVKGYVQLFPEIAAMLSHKSGVDITRASQIWDES 1109
Query: 1076 -GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPN 1134
+Q++AQ+ W+K + E P A + + V IE I +
Sbjct: 1110 VVDQKMAQLKDWIKAKGIRDLETVPLYAEQLSKETVQNIEAFTSRLVDTRTAIGAASQVK 1169
Query: 1135 KLY---IPKPTLDKLCPDP----DTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSY 1187
+++ IP+ L K P +F+L DRV+ ++D VPL RG ++GI +
Sbjct: 1170 RVFIKGIPRTALLKPRHAPFRLQAQRFELGDRVIMVQDSGNVPLSARGVVVGI-----NS 1224
Query: 1188 DAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSN 1234
D++ +VVFD PF G + RC+ +G + +++NL+ + +C ++
Sbjct: 1225 DSL-EVVFDVPFLSGTTLGDRCAPYKGATVSFVSVLNLTQPQFVCAGTS 1272
>gi|302656474|ref|XP_003019990.1| hypothetical protein TRV_05959 [Trichophyton verrucosum HKI 0517]
gi|291183768|gb|EFE39366.1| hypothetical protein TRV_05959 [Trichophyton verrucosum HKI 0517]
Length = 1303
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/441 (48%), Positives = 282/441 (63%), Gaps = 77/441 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE+ ++KA +
Sbjct: 65 -------FNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRARRFRTALDAELAKEKAIK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YF+ K++ D W+ V V+L
Sbjct: 118 EGVEMPKEDAFDSNCITPGTEFMAKLTKQLKYFINKKVSEDA---------EWQGVEVVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P+Y+PNMRHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S K ++ E F+LLHL ++R+YLELEF +LK G L FPF +E IIDD++
Sbjct: 229 TFGRQSQKKSKEL---EHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++KVY++VLP L GY+NE G +N++R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAWMFKVYKDVLPKLGGYVNEHGTINMERLRTLLAAL 345
Query: 419 ASFDFEQFREKYADIQYLEGK 439
+ +F F +Y+D ++L+ K
Sbjct: 346 SDVEFRFFEAEYSDARWLKSK 366
Score = 344 bits (882), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 244/751 (32%), Positives = 386/751 (51%), Gaps = 59/751 (7%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F K YY K + E +R E Y++ +QW L YYY G SW W+Y +HYAP
Sbjct: 506 KFQDWKDKYYKGKFGWGLENTEEMRKLTENYVQGLQWVLFYYYRGVASWPWFYRYHYAPM 565
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISDI ++ +++G+PF PFQQL+ VLP SK+++P + +LMT +SPI+++YP +
Sbjct: 566 ISDIHLGLGADVDFKLGQPFFPFQQLMGVLPDRSKKIVPVAFHSLMTSPDSPIIDFYPRD 625
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NVN 681
F D+NGKK +WEAVV IPFI+E +L+KAM EHLLT +E++RN G L +TYS +V
Sbjct: 626 FELDMNGKKMEWEAVVKIPFIEEERLLKAMATKEHLLTPDEKARNTFGVTLKFTYSPDVE 685
Query: 682 -LGTALAPDYFPAINENHAVEK-----PLYRDDIYVHPNKLRKGLCQDVNLKLYVTH-FP 734
L + P FP ++ +E + D YV GL + V + + FP
Sbjct: 686 FLYPSSLPGIFPDVSRCRCIENVFELPTMEGLDPYV-------GLVEGVKIGAEALYGFP 738
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLI 794
+L+ +Q T ++ V VFQQ SRNES+++ ++ A LGK + + YP L
Sbjct: 739 SLQTLQQTGQLGFHGVCVFQQESRNESMVVTISDPEIGGNTADAKTKLGKRVHVGYPFLQ 798
Query: 795 EIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLS----KKSITDGYYTK-LGVDIG 849
E +V V D + + G E Q+S K + YY+K LG+ IG
Sbjct: 799 EAKV--VCVSDELFDYVQVDGE--EHVVPIPHTPTQISQWKKKAEKIESYYSKRLGMVIG 854
Query: 850 NTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQ------ARESL 902
+ E +V + ++ K P G ++ T I T YA Q V ++ RE++
Sbjct: 855 DVETIVRVEMLKGLKK--TPDGATVKEFTEIPGVETEYAAQLIVDSVMSEDLRFIEREAV 912
Query: 903 EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQ 961
I+E F G + F L +YG+ V T E+ L V+ +EP+ L
Sbjct: 913 ---PIEEEFPEGARAFFLGEYNYGA--PVHVTGHEDGKLSGLLSAVKGKEPEFGREHVLN 967
Query: 962 DDTVYNYLPSYTVASKLSISPLLLSRFTGSIFI-IDSTEEGAKRHNIGLNIKFSRKNEEV 1020
+ + Y PS+ +A L +SPL L++ T S + +D T R N+GLN+KF K +V
Sbjct: 968 AEKLSKYTPSFAIARNLRLSPLTLAKITSSFSVNMDGT-----RVNLGLNLKFEAKKLKV 1022
Query: 1021 VGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQR 1079
+G++RR + W ++E+ + L+++YM +FP+ ++ D++ D +P +++
Sbjct: 1023 LGYSRRGNSG--WEFSERAIGLLQDYMIKFPDFIAGIQRKPQGDLFEPSDFYPADIAKEK 1080
Query: 1080 VAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE----KQITLFVKPNK 1135
+ +I +WLK E P A +D+ +V IE + D + Q V N
Sbjct: 1081 IKEIQAWLKSIESKSFERVPLEAEQLDSSIVQAIEKSADELSQSRPTPVAQKIRGVPRNA 1140
Query: 1136 LYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVF 1195
L P +L + F+L DRV+ +D VP+ RGT++G+ + TS + + DV+F
Sbjct: 1141 LLKPADAEHRLN---NQHFQLGDRVLYAQDSGKVPIASRGTVVGLTR--TSRNLLLDVLF 1195
Query: 1196 DKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
D F G + RCS RG +P+ +++NL+
Sbjct: 1196 DVSFMSGTTLSDRCSPFRGSTVPSSSVLNLT 1226
>gi|327301545|ref|XP_003235465.1| exonuclease [Trichophyton rubrum CBS 118892]
gi|326462817|gb|EGD88270.1| exonuclease [Trichophyton rubrum CBS 118892]
Length = 1424
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/441 (48%), Positives = 282/441 (63%), Gaps = 77/441 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE+ ++KA +
Sbjct: 65 -------FNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRARRFRTALDAELAKEKAIK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YF+ K++ D W+ V V+L
Sbjct: 118 EGVEMPKEDAFDSNCITPGTEFMAKLTKQLKYFINKKVSEDA---------EWQGVEVVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P+Y+PNMRHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S K ++ E F+LLHL ++R+YLELEF +LK G L FPF +E IIDD++
Sbjct: 229 TFGRQSQKKSKEL---EHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++KVY++VLP L GY+NE G +N++R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAWMFKVYKDVLPKLGGYVNEHGTINMERLRTLLAAL 345
Query: 419 ASFDFEQFREKYADIQYLEGK 439
+ +F F +Y+D ++L+ K
Sbjct: 346 SDVEFRFFEAEYSDARWLKSK 366
Score = 348 bits (894), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 246/750 (32%), Positives = 384/750 (51%), Gaps = 57/750 (7%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F K YY K + E +R E Y++ +QW L YYY G SW W+Y +HYAP
Sbjct: 506 KFQDWKDKYYKGKFGWGLENTEEMRKLTENYVQGLQWVLFYYYRGVASWPWFYRYHYAPM 565
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISDI ++ +++G+PF PFQQL+ VLP SK+++P + LMT +SPI+++YP +
Sbjct: 566 ISDIHLGLGADVDFKLGQPFFPFQQLMGVLPDRSKKIVPVAFHGLMTTPDSPIIDFYPRD 625
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NVN 681
F D+NGKK +WEAVV IPFIDE +L+KAM EHLLT EE++RN G L +TYS +V
Sbjct: 626 FELDMNGKKMEWEAVVKIPFIDEERLLKAMATKEHLLTPEEKARNTFGVTLKFTYSPDVE 685
Query: 682 -LGTALAPDYFPAINENHAVEK-----PLYRDDIYVHPNKLRKGLCQDVNLKLYVTH-FP 734
L + P FP ++ +E + D YV GL + V + + FP
Sbjct: 686 FLYPSSLPGIFPDVSRCRCIENVFELPTMEGLDPYV-------GLVEGVKIGAEALYGFP 738
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLI 794
+L+ +Q T ++ V VFQQ SRNES+++ ++ A LGK + + YP L
Sbjct: 739 SLQTLQQTGQLGFHGVCVFQQESRNESMVVTISDPEIGGNTADAKIKLGKRVHVGYPFLQ 798
Query: 795 EIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLS----KKSITDGYYTK-LGVDIG 849
E +V V D + + G E Q+S K + YY+K LG+ IG
Sbjct: 799 EAKV--VCVSDELFDYVQVDGE--EHVVPIPHTPTQISQWKKKAEKIESYYSKRLGMIIG 854
Query: 850 NTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESLEYKT-- 906
+ E +V + ++ K P G ++ T I T YA Q V ++ E L +
Sbjct: 855 DVETIVRVEMLKGLKK--TPDGATVKEFTEIPGVETEYAAQLIVDSV--VSEDLRFVERE 910
Query: 907 ---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQD 962
I+E F G + F L +YG+ V T E+ L V+ +EP+ L
Sbjct: 911 AVPIEEEFPEGARAFFLGEYNYGA--PVHVTGHEDGKLSGLLSAVKGKEPEFGREHVLNA 968
Query: 963 DTVYNYLPSYTVASKLSISPLLLSRFTGSIFI-IDSTEEGAKRHNIGLNIKFSRKNEEVV 1021
+ + Y PS+ +A L +SPL L++ T S + +D T R N+GLN+KF K +V+
Sbjct: 969 EKLSKYTPSFAIARNLRLSPLTLAKITSSFSVNMDGT-----RVNLGLNLKFEAKKLKVL 1023
Query: 1022 GFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRV 1080
G++RR + W ++E+ + L+++YM +FP+ ++ D++ D +P ++++
Sbjct: 1024 GYSRRGNSG--WEFSERAIALLQDYMIKFPDFIAGIQRKPQGDLFEPSDFYPADIAKEKI 1081
Query: 1081 AQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE----KQITLFVKPNKL 1136
+I +WLK E P A +D+ +V IE + D + Q V N L
Sbjct: 1082 KEIQAWLKSIESKSFERVPLEAEQLDSSIVQAIEKSADELSQSRPTPVAQKIRGVPRNAL 1141
Query: 1137 YIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFD 1196
P +L + F+L DRV+ +D VP+ RGT++G+ + TS + + DV+FD
Sbjct: 1142 LKPADAEHRLN---NQHFQLGDRVLYAQDSGKVPIASRGTVVGLTR--TSRNLLLDVLFD 1196
Query: 1197 KPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
F G + RCS RG +P+ +++NL+
Sbjct: 1197 VSFMSGTTLADRCSPFRGSTVPSSSVLNLT 1226
>gi|301111760|ref|XP_002904959.1| 5'-3' exoribonuclease, putative [Phytophthora infestans T30-4]
gi|262095289|gb|EEY53341.1| 5'-3' exoribonuclease, putative [Phytophthora infestans T30-4]
Length = 972
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 262/751 (34%), Positives = 392/751 (52%), Gaps = 147/751 (19%)
Query: 1 MGVPKFFRYISERYP-CLSEVV----------REYQIP----------EFDNLYLDMNGI 39
MGVP F+R++ E+YP C+ + V R +++ E DNLY+DMNG+
Sbjct: 1 MGVPAFYRWVQEKYPKCVVDCVESRAVVLEGERHFELTDTTGPSPNGFEVDNLYVDMNGL 60
Query: 40 IHNCSHP-NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQR 98
IH C+HP N P TE+++++ + Y++ L ++P+++ ++AIDGVAPRAKMNQQR
Sbjct: 61 IHPCAHPENGEAPK---TEEEMYRRVMAYVDRLVAAVRPRRVLYLAIDGVAPRAKMNQQR 117
Query: 99 GRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQ 158
RRFRSA+EAE +R+ EK
Sbjct: 118 ARRFRSAQEAE----------QRMEVEK-------------------------------- 135
Query: 159 RGRRFRSAKEAEVLEQKAKEKGERLPT--EKRFDSNCITPGTPFMCRLHQQLRYFVKLKI 216
E LE + G ++P+ EK +DSN ITPGT FM +L + LR++++ ++
Sbjct: 136 -----------EALEYMSA-LGHKVPSKQEKPWDSNVITPGTKFMAKLAKHLRFYIRDRV 183
Query: 217 TTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLD 276
+ WK + +ILS PGEGEHK+M YIR +S+P Y+PN H L+GLD
Sbjct: 184 NNNA---------AWKSIKIILSDAGVPGEGEHKLMQYIRVQRSQPGYDPNQHHVLHGLD 234
Query: 277 ADLIMLGLCTHEPYFSLLREEVKFN-----------------------TKSNKG-----G 308
ADLIMLGL THE FS+LREEV F K +G
Sbjct: 235 ADLIMLGLATHEVKFSILREEVLFGKQKYERERQKEQQTVLDANGTTLNKRKRGEFGEHD 294
Query: 309 SQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDF 368
+ +V + LH++ +R+YL++EF L VL F + E +IDD+V + F +GNDF
Sbjct: 295 ADLVASDLKPLQYLHIATLREYLQVEFEPLSR--VLPFEYDFERVIDDFVFLCFFVGNDF 352
Query: 369 IPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFD---FEQ 425
+P+LP L I +GAL L +Y ++LP + GYI +GG+++L R + L ++ + F++
Sbjct: 353 LPHLPSLDIRDGALDFLILIYAKLLPAMGGYITDGGHVDLSRVDVILAEVGQVEDVIFQR 412
Query: 426 FREKYADIQ-----YLEGKMGKKFSDVFHKE------KSKEMDPDLAALIKATDDDYDDG 474
K A+ + +L + + + K+ K + +D D I A D Y
Sbjct: 413 RALKQAENERRRKSHLSNEKKDQIAAAAAKDSAVEILKKRRIDKD----IIAADKKYGGL 468
Query: 475 TEEVLNYANYEEYYYSDEDEEWRTNF-----FSEFGQHKTDYYHYKLDYAKVTNEVLRDQ 529
T E A +E + E++R E G KT YY KL + R++
Sbjct: 469 TAEEAVKARVKE-SVEKKLEQYREEVQDVVRLGEPGW-KTRYYSDKLKADDIEVGGGRER 526
Query: 530 A-ECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQL 588
YI + W + YYY GC SW W+YP HYAP+ SD+++ +K++ G PF PF+QL
Sbjct: 527 VFHAYIEGLCWVMRYYYTGCASWQWFYPFHYAPFASDLRNIDRFEIKFDEGLPFHPFEQL 586
Query: 589 LAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKL 648
+ V PA S +P+PY++LM+ SPI+++YP E D NGK W VVL+PFIDE +L
Sbjct: 587 MGVFPAGSGHAIPKPYRSLMSDPESPIIDFYPTEIPVDPNGKAMPWLWVVLLPFIDEERL 646
Query: 649 IKAMDAVEHLLTDEERSRN-RHGPMLVYTYS 678
++AM LT+ E+ RN R G +V+ ++
Sbjct: 647 LEAMKEPNQKLTEAEKKRNARFGKEVVFFHT 677
>gi|195388580|ref|XP_002052957.1| GJ23613 [Drosophila virilis]
gi|194151043|gb|EDW66477.1| GJ23613 [Drosophila virilis]
Length = 774
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 264/739 (35%), Positives = 375/739 (50%), Gaps = 137/739 (18%)
Query: 1 MGVPKFFRYISERYPCL---------------SEVVREYQIP-----EFDNLYLDMNGII 40
MGVP FFR++S++YPC+ + + +P EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSKKYPCVIIECNENKRVDVETGKTIFEDSTLPNPNGVEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C+HP D P + E+++ IF I+ LF +++P+KL +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCTHPEDK-PAPK-NEEEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AKE EKR + ++ N+
Sbjct: 119 RFRAAKET---------------IEKRLEIERIR---------------------NELLT 142
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
R + E KEKGE FDSNCITPGTPFM RL + L Y++ ++ +
Sbjct: 143 RGCKLPPE--------KEKGE------HFDSNCITPGTPFMDRLSKCLHYYIHDRLNNNP 188
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
WK + VILS PGEGEHKIMDYIR +++PD+NPN H L G DADLI
Sbjct: 189 ---------AWKGIQVILSDANVPGEGEHKIMDYIRKQRAQPDHNPNTHHVLCGADADLI 239
Query: 281 MLGLCTHEPYFSLLREEVKFN--------------------------TKSNKGGSQIVTP 314
MLGL THEP F+++REE N + +N +
Sbjct: 240 MLGLATHEPNFTIIREEFLPNKPRPCDICNQFGHEMDKCVGLGAAGTSNNNHFSPDVPIG 299
Query: 315 EETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPD 374
E KF + LS++R+YL+ L+ P L F + E ++DDWV M F +GNDF+P+LP
Sbjct: 300 AEVKFIFVRLSVLREYLK---KTLQMPN-LPFTYDFERVLDDWVFMCFFVGNDFLPHLPS 355
Query: 375 LHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQ 434
L I GA+ L ++Y++ + GY+ + G +NL R + +T L + + + F+++ Q
Sbjct: 356 LEIREGAIDRLVELYKKCVYKTKGYLTDSGEVNLDRVQLIMTDLGNVEDQIFKDRQRREQ 415
Query: 435 YLEGKMGKKFSDVFHKEKS----KEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYS 490
+ + + ++ E+S + PD + T +Y V +N S
Sbjct: 416 QYKARQQRDNNNSKALEESVFGPAPVGPDNNKIQTIT--NYKQAASSVRMASNGAAKRSS 473
Query: 491 DED------------EEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQ 538
W F K YY K D + A Y+R +
Sbjct: 474 TTANLDDDDENNDEVRLWEEGF-------KNRYYESKFDVPPDNLQFRYAVALQYVRGLC 526
Query: 539 WNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPFQQLLAVLPAASK 597
W L YYY GC SW+WY+P+HYAP+ SD + L+ +E G +PF P +QL+ V PAAS
Sbjct: 527 WVLKYYYQGCASWNWYFPYHYAPFASDFVNIQGLSTIFEKGTKPFNPLEQLMGVFPAASS 586
Query: 598 ELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEH 657
+PEP+ LM+ +S I+++YP++F DLNGKK W+ V L+PF+DE +L KA+ +
Sbjct: 587 SHVPEPWAQLMSRPDSTIIDFYPDDFKIDLNGKKFAWQGVALLPFVDENRLFKALIPLHS 646
Query: 658 LLTDEERSRNRHGPMLVYT 676
LTDEE RN+ G +Y
Sbjct: 647 HLTDEEVKRNKRGENNLYV 665
>gi|71005096|ref|XP_757214.1| hypothetical protein UM01067.1 [Ustilago maydis 521]
gi|46096576|gb|EAK81809.1| hypothetical protein UM01067.1 [Ustilago maydis 521]
Length = 1478
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/432 (49%), Positives = 273/432 (63%), Gaps = 76/432 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFR++SERYP +S+++ + +IPEFDNLYLDMNGIIHNCSHPNDND FRITE QI
Sbjct: 1 MGIPKFFRFMSERYPMISQLIEDNKIPEFDNLYLDMNGIIHNCSHPNDNDASFRITETQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F +F YIE LF I+P+K+FF+A+DGVAPRAKMNQQR RRFR+AKEA+ +++KA+ +GE
Sbjct: 61 FLAVFAYIEHLFNKIKPRKVFFLAVDGVAPRAKMNQQRSRRFRTAKEAKEIKEKAESRGE 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
LP E+ FD C FM AK++QQ
Sbjct: 121 VLPEEEAFD----SNCITPGTPFM--------AKLSQQ---------------------- 146
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
L YF+ KIT D W++V VILSG
Sbjct: 147 ---------------------------LEYFIAKKITEDA---------DWRNVQVILSG 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
H+ PGEGEHKIM+YIR K++PDYNPN+RHCLYGLDADLIMLGL +H+P+F LLREEV+F
Sbjct: 171 HDVPGEGEHKIMEYIRLSKAQPDYNPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVQF 230
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
+ GS E FFLLHLSL R+YL+LEF L+ L FP+ E IIDD++L+
Sbjct: 231 GPRRKSKGSL----EMQNFFLLHLSLFREYLDLEFQDLRSS--LPFPYDFERIIDDFILL 284
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
+GNDF+P+LP LHI GA+ LL+ +Y+ +LP GY+NE G L R E L++L +
Sbjct: 285 NIFVGNDFLPHLPGLHINQGAMDLLFNIYKRILPAAGGYLNESGTLRTDRLELVLSELRN 344
Query: 421 FDFEQFREKYAD 432
F+ EQF Y D
Sbjct: 345 FEMEQFERDYGD 356
Score = 335 bits (860), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 239/781 (30%), Positives = 387/781 (49%), Gaps = 69/781 (8%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCV 549
+D +E+++ ++ K YY KL+ +E + A YI +QW LHYYY+G
Sbjct: 520 ADPEEDYKKRLEAQMTAWKQSYYKEKLEIDYNNDEAMSKLAFRYIEGLQWVLHYYYDGVA 579
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMT 609
SW W+Y +HYAP ISD+K+ + ++ +G+PF PF QL+ VLPA S + +P +++LMT
Sbjct: 580 SWGWFYDYHYAPKISDLKNVGQMKFEFTLGKPFRPFDQLMGVLPALSSQHIPSAFRDLMT 639
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
NSPI+++YP F DLNGKKQDWEAVV IPFIDE +L++A+D E L EER RN
Sbjct: 640 DPNSPIIDFYPTNFEADLNGKKQDWEAVVKIPFIDEKRLLEALDKREVYLGIEERKRNGF 699
Query: 670 GPMLVYTY--SNVNLGTALAPDYFPAINENHAVEKPL---YRDDIYVHPNKLRKGLCQDV 724
G +TY + + + P FP + N A K D ++ L KGL + V
Sbjct: 700 GNSREFTYNENEESFFPSSLPGTFPDLVHNRANVKNFNLPTLDGLH-----LVKGLTKGV 754
Query: 725 NLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQIL 782
L + FP+LK + ++ + V +FQ S+ S+++ +++ + + +A ++
Sbjct: 755 ELGARALAGFPSLKTLPHYGRLGHHGVNIFQAESKGVSVVVTIENTYEDAKTETIAAAMI 814
Query: 783 GKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLS----KKSITD 838
G F+N+P L E V V+ + R G ++ + LS K T+
Sbjct: 815 GNRAFLNWPFLTEGLVVGVSDRLFRYEMGMIGGQ--QKVVANPHQGANLSEFHRKAESTE 872
Query: 839 GYYTK-LGVDIGNTEVLVYGQPVESRK----------YFFGPRGKVTQQRTFIRSTVTYA 887
+Y+K LGV IG+ +VLV+ +P++ K Y + +++Q ++ TVT
Sbjct: 873 FHYSKRLGVLIGDVDVLVHIRPLKGLKRLDDGAFIKDYEDSSKKEISQA---VQVTVTNV 929
Query: 888 YQSAVLNLQQARESL--EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLS 945
L+ + EY IF+ G YG+ V+ + + I+++
Sbjct: 930 VHDDARFLESPARPIREEYPDKTRIFFLGANA-------YGTPAHVVGSTNASLA-IEVA 981
Query: 946 F---KVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGA 1002
F + ++ L DLV + NY PSY VA K IS L LS+ S+ +
Sbjct: 982 FFPNQAKENAYLRDLVSKR--ARVNYFPSYQVAKKCGISSLALSKLASSMMFAWKDQ--- 1036
Query: 1003 KRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSS 1062
+ N+GL +KF K E+V+G++RR T W Y+E+ + L+K Y++ FPE+ L +SS
Sbjct: 1037 -KVNVGLRLKFESKGEKVLGYSRR--TAVGWEYSEKSLELVKEYVQTFPEITNMLSQNSS 1093
Query: 1063 DDIYLRDDVFPHQ-GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCE 1121
DI ++ ++++AQ+ WLK + E P A + + V IE
Sbjct: 1094 VDITRATQIWDESVVDEKMAQLKEWLKVKGVRDLETVPLYAEQLSKETVQTIEAFTSRLV 1153
Query: 1122 KVEKQITLFVKPNKLY---IPKPTLDKLCPDP----DTKFKLFDRVVNIRDCYTVPLGYR 1174
I + +++ IP+ L K P +F+L DRV+ ++D VPL R
Sbjct: 1154 DTRTAIGAAGQVKRVFIKGIPRTALLKPSHAPFRLQAQRFELGDRVIMVQDSGNVPLSAR 1213
Query: 1175 GTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGN 1232
G ++GI +VVFD PF G + RCS +G + +++NL+ + +C
Sbjct: 1214 GVVVGINSNS------LEVVFDVPFLSGTTLGDRCSPYKGATVSFVSVLNLTQPQFVCAG 1267
Query: 1233 S 1233
+
Sbjct: 1268 T 1268
>gi|315049287|ref|XP_003174018.1| hypothetical protein MGYG_04190 [Arthroderma gypseum CBS 118893]
gi|311341985|gb|EFR01188.1| hypothetical protein MGYG_04190 [Arthroderma gypseum CBS 118893]
Length = 1424
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/441 (48%), Positives = 282/441 (63%), Gaps = 77/441 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE+ +++A +
Sbjct: 65 -------FNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRARRFRTALDAELAKERAIK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YFV K++ D W+ V V+L
Sbjct: 118 EGIEMPKEDAFDSNCITPGTEFMAKLTKQLKYFVNKKVSEDA---------EWQGVEVVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P+Y+PNMRHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S K ++ E F+LLHL ++R+YLELEF +LK G L FPF +E IIDD++
Sbjct: 229 TFGRQSQKKSKEL---EHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++KVY+E+LP L GY+NE G +N++R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAWMFKVYKEILPKLGGYVNEHGKINMERLRTLLAAL 345
Query: 419 ASFDFEQFREKYADIQYLEGK 439
+ +F F +Y+D ++L+ K
Sbjct: 346 SDVEFRFFEAEYSDARWLKSK 366
Score = 338 bits (867), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 238/748 (31%), Positives = 374/748 (50%), Gaps = 51/748 (6%)
Query: 502 SEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAP 561
++F K YY K + E +R E Y++ +QW L YYY G SW W+Y +HYAP
Sbjct: 504 NKFQDWKDKYYKGKFGWGLENAEEMRKLTENYVQGLQWVLFYYYRGVASWPWFYRYHYAP 563
Query: 562 YISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
ISDI ++ +++G+PF PFQQL+ VLP SK+++P + +LMT SPI+++YP
Sbjct: 564 MISDIHLGLGADVDFKLGQPFFPFQQLMGVLPDRSKKIVPVAFHSLMTTPESPIIDFYPR 623
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NV 680
+F D+NGKK +WEAVV IPFI+E +L+KAM EHLLT +E++RN G L +TYS +V
Sbjct: 624 DFELDMNGKKMEWEAVVKIPFIEEERLLKAMATKEHLLTPDEKARNSFGVTLKFTYSPDV 683
Query: 681 N-LGTALAPDYFPAINENHAVEK-----PLYRDDIYVHPNKLRKGLCQDVNLKLYVTH-F 733
L + P FP ++ +E + D YV GL + V + + F
Sbjct: 684 EFLYPSSLPGIFPDVSRCRCIENVFELPTMEGLDPYV-------GLVEGVKIGAEALYGF 736
Query: 734 PTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHL 793
P+L+ +Q T ++ V VFQQ SRNES+++ ++ A LGK + + YP L
Sbjct: 737 PSLQTLQQTGQLGFHGVCVFQQESRNESMVVTISDPEIVGNTADAKAKLGKRVHVGYPFL 796
Query: 794 IEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSI--TDGYYTK-LGVDIGN 850
E +V V D + + G A KK + YY+K LG+ IG+
Sbjct: 797 QEAKV--VCVSDELFDYVQVDGEEHVVAIPHTPTQINQWKKKAERIESYYSKRLGMVIGD 854
Query: 851 TEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKT---- 906
E +V VE K T + V Y + ++ E L +
Sbjct: 855 VETIVR---VEMLKGLTKTADGATVKEFTEIPGVETEYAAQIIVDSVVSEDLRFIERAAV 911
Query: 907 -IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQDDT 964
I+ F G + F L +YG+ V T E+ L V+ +EP+ + +
Sbjct: 912 PIENEFPEGARAFFLGEYNYGA--PVHVTGHEDGKLSGLLSAVKGKEPEFGREHVMNAEK 969
Query: 965 VYNYLPSYTVASKLSISPLLLSRFTGSIFI-IDSTEEGAKRHNIGLNIKFSRKNEEVVGF 1023
+ Y PS+ +A L +SPL L++ T S + +D T R N+GLN+KF K +V+G+
Sbjct: 970 LSRYTPSFAIARNLRLSPLTLAKITSSFSVNMDGT-----RVNLGLNLKFEAKKLKVLGY 1024
Query: 1024 TRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQ 1082
+RR + W ++E+ + L+++YM +FP+ ++ D++ D +P + ++ +
Sbjct: 1025 SRRGNSG--WEFSEKAIGLLQDYMIKFPDFIAGIQRKPQGDVFEPSDFYPADIAKDKIKE 1082
Query: 1083 IVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE----KQITLFVKPNKLYI 1138
I +WLK E P A +D+ VV IE + D + Q V N L
Sbjct: 1083 IQAWLKSIESKSFERVPLEAEQLDSSVVQAIEKSADELSQTRPTPVAQKIRGVPRNALLK 1142
Query: 1139 PKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKP 1198
P +L + F+L DRV+ +D VP+ RGT++G+ + TS + + DV+FD
Sbjct: 1143 PADAEHRLN---NQHFQLGDRVLYAQDSGKVPIASRGTVVGLTR--TSRNLLLDVLFDVS 1197
Query: 1199 FPHGVKI--RCSESRGYRMPAQAMINLS 1224
F G + RCS RG +P+ +++NL+
Sbjct: 1198 FMSGTTLADRCSPFRGSTVPSSSVLNLT 1225
>gi|326480075|gb|EGE04085.1| 5'-3' exoribonuclease [Trichophyton equinum CBS 127.97]
Length = 1424
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/441 (48%), Positives = 281/441 (63%), Gaps = 77/441 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE+ +++A +
Sbjct: 65 -------FNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRARRFRTALDAELAKERAIK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YF+ K++ D W+ V V+L
Sbjct: 118 EGVEMPKEDAFDSNCITPGTEFMAKLTKQLKYFINKKVSEDA---------EWQGVEVVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P+Y+PNMRHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S K ++ E F+LLHL ++R+YLELEF +LK G L FPF +E IIDD++
Sbjct: 229 TFGRQSQKKSKEL---EHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++KVY+E+LP L GY+NE G +N+ R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAWMFKVYKEILPKLGGYVNEHGTINMGRLRTLLAAL 345
Query: 419 ASFDFEQFREKYADIQYLEGK 439
+ +F F +Y+D ++L+ K
Sbjct: 346 SDVEFRFFEAEYSDARWLKSK 366
Score = 347 bits (890), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 246/750 (32%), Positives = 385/750 (51%), Gaps = 57/750 (7%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F K YY K + E +R E Y++ +QW L YYY G SW W+Y +HYAP
Sbjct: 506 KFQDWKDKYYKGKFGWGLENAEEMRKLTENYVQGLQWVLFYYYRGVASWPWFYRYHYAPM 565
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISDI ++ +++G+PF PFQQL+ VLP SK+++P + +LMT +SPI+++YP +
Sbjct: 566 ISDIHLGLGADVDFKLGQPFFPFQQLMGVLPDRSKKIVPVAFHSLMTSPDSPIIDFYPRD 625
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NVN 681
F D+NGKK +WEAVV IPFIDE +L+KAM EHLLT EE++RN G L ++YS +V
Sbjct: 626 FELDMNGKKMEWEAVVKIPFIDEERLLKAMATKEHLLTPEEKARNSFGVTLKFSYSPDVE 685
Query: 682 -LGTALAPDYFPAINENHAVEK-----PLYRDDIYVHPNKLRKGLCQDVNLKLYVTH-FP 734
L + P FP ++ +E + D YV GL + V + + FP
Sbjct: 686 FLYPSSLPGIFPDVSRCRCIENVFELPTMEGLDPYV-------GLVEGVKIGAEALYGFP 738
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLI 794
+L+ +Q T ++ V VFQQ SRNES+++ ++ A LGK + + YP L
Sbjct: 739 SLQTLQQTGQLGFHGVCVFQQESRNESMVVTISDPEIGGNTADAKTKLGKRVHVGYPFLQ 798
Query: 795 EIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLS----KKSITDGYYTK-LGVDIG 849
E +V V D + + G E Q+S K + YY+K LG+ IG
Sbjct: 799 EAKV--VCVSDELFDYVQVDGE--EHVVPIPHTPTQISQWKKKAEKIESYYSKRLGMVIG 854
Query: 850 NTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESL-----E 903
+ E +V + ++ K P G ++ T I T YA Q V ++ E L E
Sbjct: 855 DVETIVRVEMLKGLKK--TPDGATVKEFTEIPGVETEYAAQLIVDSV--VSEDLRFIERE 910
Query: 904 YKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQD 962
I+E F G + F L +YG+ V T E+ L V+ +EP+ L
Sbjct: 911 AVPIEEEFPEGARAFFLGEYNYGA--PVHVTGHEDGKLSGLLSAVKGKEPEFGREHVLNA 968
Query: 963 DTVYNYLPSYTVASKLSISPLLLSRFTGSIFI-IDSTEEGAKRHNIGLNIKFSRKNEEVV 1021
+ + Y PS+ +A L +SPL L++ T S + +D T R N+GLN+KF K +V+
Sbjct: 969 EKLSKYTPSFAIARNLRLSPLTLAKITSSFSVNMDGT-----RVNLGLNLKFEAKKLKVL 1023
Query: 1022 GFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRV 1080
G++RR + W ++E+ + L+++YM +FP+ ++ D++ D +P ++++
Sbjct: 1024 GYSRRGNSG--WEFSERAIGLLQDYMIKFPDFIAGIQRKPQGDLFEPSDFYPADIAKEKI 1081
Query: 1081 AQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE----KQITLFVKPNKL 1136
+I +WLK E P A +D+ +V IE + D + Q V N L
Sbjct: 1082 KEIQAWLKSIESKSFERVPLEAEQLDSSIVQAIEKSADELSQSRPTPVAQKIRGVPRNAL 1141
Query: 1137 YIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFD 1196
P +L + F+L DRV+ +D VP+ RGT++G+ + TS + + DV+FD
Sbjct: 1142 LKPADAEHRLN---NQHFQLGDRVLYAQDSGKVPIASRGTVVGLTR--TSRNLLLDVLFD 1196
Query: 1197 KPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
F G + RCS RG +P+ +++NL+
Sbjct: 1197 VSFMSGTTLADRCSPFRGSTVPSSSVLNLT 1226
>gi|326468946|gb|EGD92955.1| exonuclease [Trichophyton tonsurans CBS 112818]
Length = 1424
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/441 (48%), Positives = 281/441 (63%), Gaps = 77/441 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE+ +++A +
Sbjct: 65 -------FNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRARRFRTALDAELAKERAIK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YF+ K++ D W+ V V+L
Sbjct: 118 EGVEMPKEDAFDSNCITPGTEFMAKLTKQLKYFINKKVSEDA---------EWQGVEVVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P+Y+PNMRHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S K ++ E F+LLHL ++R+YLELEF +LK G L FPF +E IIDD++
Sbjct: 229 TFGRQSQKKSKEL---EHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++KVY+E+LP L GY+NE G +N+ R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAWMFKVYKEILPKLGGYVNEHGTINMGRLRTLLAAL 345
Query: 419 ASFDFEQFREKYADIQYLEGK 439
+ +F F +Y+D ++L+ K
Sbjct: 346 SDVEFRFFEAEYSDARWLKSK 366
Score = 347 bits (889), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 246/750 (32%), Positives = 385/750 (51%), Gaps = 57/750 (7%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F K YY K + E +R E Y++ +QW L YYY G SW W+Y +HYAP
Sbjct: 506 KFQDWKDKYYKGKFGWGLENAEEMRKLTENYVQGLQWVLFYYYRGVASWPWFYRYHYAPM 565
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISDI ++ +++G+PF PFQQL+ VLP SK+++P + +LMT +SPI+++YP +
Sbjct: 566 ISDIHLGLGADVDFKLGQPFFPFQQLMGVLPDRSKKIVPVAFHSLMTSPDSPIIDFYPRD 625
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NVN 681
F D+NGKK +WEAVV IPFIDE +L+KAM EHLLT EE++RN G L ++YS +V
Sbjct: 626 FELDMNGKKMEWEAVVKIPFIDEERLLKAMATKEHLLTPEEKARNSFGVTLKFSYSPDVE 685
Query: 682 -LGTALAPDYFPAINENHAVEK-----PLYRDDIYVHPNKLRKGLCQDVNLKLYVTH-FP 734
L + P FP ++ +E + D YV GL + V + + FP
Sbjct: 686 FLYPSSLPGIFPDVSRCRCIENVFELPTMEGLDPYV-------GLVEGVKIGAEALYGFP 738
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLI 794
+L+ +Q T ++ V VFQQ SRNES+++ ++ A LGK + + YP L
Sbjct: 739 SLQTLQQTGQLGFHGVCVFQQESRNESMVVTISDPEIGGNTADAKTKLGKRVHVGYPFLQ 798
Query: 795 EIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLS----KKSITDGYYTK-LGVDIG 849
E +V V D + + G E Q+S K + YY+K LG+ IG
Sbjct: 799 EAKV--VCVSDELFDYVQVDGE--EHVVPIPHTPTQISQWKKKAEKIESYYSKRLGMVIG 854
Query: 850 NTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESL-----E 903
+ E +V + ++ K P G ++ T I T YA Q V ++ E L E
Sbjct: 855 DVETIVRVEMLKGLKK--TPDGATVKEFTEIPGVETEYAAQLIVDSV--VSEDLRFIERE 910
Query: 904 YKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQD 962
I+E F G + F L +YG+ V T E+ L V+ +EP+ L
Sbjct: 911 AVPIEEEFPEGARAFFLGEYNYGA--PVHVTGHEDGKLSGLLSAVKGKEPEFGREHVLNA 968
Query: 963 DTVYNYLPSYTVASKLSISPLLLSRFTGSIFI-IDSTEEGAKRHNIGLNIKFSRKNEEVV 1021
+ + Y PS+ +A L +SPL L++ T S + +D T R N+GLN+KF K +V+
Sbjct: 969 EKLSKYTPSFAIARNLRLSPLTLAKITSSFSVNMDGT-----RVNLGLNLKFEAKKLKVL 1023
Query: 1022 GFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRV 1080
G++RR + W ++E+ + L+++YM +FP+ ++ D++ D +P ++++
Sbjct: 1024 GYSRRGNSG--WEFSERAIGLLQDYMIKFPDFIAGIQRKPQGDLFEPSDFYPADIAKEKI 1081
Query: 1081 AQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE----KQITLFVKPNKL 1136
+I +WLK E P A +D+ +V IE + D + Q V N L
Sbjct: 1082 KEIQAWLKSIESKSFERVPLEAEQLDSSIVQAIEKSADELSQSRPTPVAQKIRGVPRNAL 1141
Query: 1137 YIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFD 1196
P +L + F+L DRV+ +D VP+ RGT++G+ + TS + + DV+FD
Sbjct: 1142 LKPTDAEHRLN---NQHFQLGDRVLYAQDSGKVPIASRGTVVGLTR--TSRNLLLDVLFD 1196
Query: 1197 KPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
F G + RCS RG +P+ +++NL+
Sbjct: 1197 VSFMSGTTLADRCSPFRGSTVPSSSVLNLT 1226
>gi|357615796|gb|EHJ69836.1| hypothetical protein KGM_03375 [Danaus plexippus]
Length = 699
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 264/733 (36%), Positives = 373/733 (50%), Gaps = 147/733 (20%)
Query: 1 MGVPKFFRYISERYP-----CLSE---------VVREYQIP-----EFDNLYLDMNGIIH 41
MGVP FFR++S +YP C+ + + + +P EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECVEQRPTDVDGQLIYADSSLPNPNGIEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP D P E ++ IF I+ LFR+++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEDKPPP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FR++KE T+++ D I
Sbjct: 119 FRASKE----------------TQEKIDEIA----------------------------- 133
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKIT 217
R E +V KG LP E+ FDSNCITPGTPFM RL + L Y++ ++
Sbjct: 134 --RIRNELQV-------KGAYLPPERPKEAHFDSNCITPGTPFMDRLSKCLHYYIHDRLN 184
Query: 218 TDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDA 277
D WK V VILS PGEGEHKIMDYIR +++PD++PN +H L G DA
Sbjct: 185 NDP---------GWKGVKVILSDANVPGEGEHKIMDYIRRQRAQPDHDPNTQHVLCGADA 235
Query: 278 DLIMLGLCTHEPYFSLLREEVKFNTK-----SNKGGSQI-----VTPEET---------- 317
DLIMLGL THEP F+++REE K N + G ++ TP+ +
Sbjct: 236 DLIMLGLATHEPNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTTPDASLVRSDPSFGN 295
Query: 318 --KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
F + L+++R+YLE E L P L F + E +DDWV M F +GNDF+P+LP L
Sbjct: 296 QDSFIFVRLTVLREYLEKE---LSMPN-LPFKYDFERALDDWVFMCFFVGNDFLPHLPSL 351
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD--- 432
I GA+ L +Y++ + G+I + G +NL R + + +L + E FR ++ +
Sbjct: 352 EIREGAVDRLVNLYKKCVYKTRGWITDSGDVNLDRVQVIMDELGRVEDEIFRRRHQNELS 411
Query: 433 --------------------IQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYD 472
Q+ K+G++ S + + + LA + + + +
Sbjct: 412 FKAREKNKKQQKINFELLEKTQFAPVKVGEE-SKTVENARKEAANIRLAGMQAVAEAEKE 470
Query: 473 D-GTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAE 531
G + A ++ DE W F K YY K + A+ E A
Sbjct: 471 QRGQKRSAEQAGLDDDDAHDEVRLWEEGF-------KERYYESKFEVARDNLEFRYRVAL 523
Query: 532 CYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPFQQLLA 590
Y+R + W L YYY GC SW WY+P+HYAP+ SD + L+ K+E G +PF P +QL+
Sbjct: 524 QYVRGLCWVLRYYYQGCASWKWYFPYHYAPFASDFVNIQGLSTKFERGTQPFRPLEQLMG 583
Query: 591 VLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIK 650
V PAAS + +P P+ LM+ SPI+++YP +F DLNGKK W+ V L+PF+DE +L K
Sbjct: 584 VFPAASSQHVPRPWATLMSDPFSPIIDFYPTDFKIDLNGKKFAWQGVALLPFVDETRLFK 643
Query: 651 AMDAVEHLLTDEE 663
A++ LT E
Sbjct: 644 ALEPYYDDLTQAE 656
>gi|194862714|ref|XP_001970086.1| GG10442 [Drosophila erecta]
gi|190661953|gb|EDV59145.1| GG10442 [Drosophila erecta]
Length = 902
Score = 426 bits (1094), Expect = e-115, Method: Compositional matrix adjust.
Identities = 265/747 (35%), Positives = 375/747 (50%), Gaps = 156/747 (20%)
Query: 1 MGVPKFFRYISERYPCL---------------SEVVREYQIP-----EFDNLYLDMNGII 40
MGVP FFR++S +YP + + + +P EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKQVDTDTGRNIYEDATLPNPNGIEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C+HP D P + E ++ IF I+ LF +++P+KL +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCTHPEDK-PAPK-NEDEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AKE TEKR + ++
Sbjct: 119 RFRAAKET---------------TEKRLEIARIR-------------------------- 137
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKI 216
E+L +G +LP EK FDSNCITPGTPFM RL + L YFV ++
Sbjct: 138 --------EELL-----SRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFVHDRL 184
Query: 217 TTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLD 276
+ WK + VILS PGEGEHKIMD+IR +++PD++PN +H L G D
Sbjct: 185 NNNP---------AWKGIKVILSDANVPGEGEHKIMDFIRKQRAQPDHDPNTQHVLCGAD 235
Query: 277 ADLIMLGLCTHEPYFSLLREE----------------------VKFNTKSNKGGS---QI 311
ADLIMLGL THEP F+++REE V + G + +
Sbjct: 236 ADLIMLGLATHEPNFTIIREEFLPNKPRPCDICNGFGHEMDKCVGLGATAPTGANFKPDV 295
Query: 312 VTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPN 371
E KF + LS++R+YL+ L+ P L F +S E +DDWV M F +GNDF+P+
Sbjct: 296 PIGAEVKFIFVRLSVLREYLKQ---TLEMPN-LPFEYSFERALDDWVFMCFFVGNDFLPH 351
Query: 372 LPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYA 431
LP L I GA+ L ++Y++ + GY+ + G +NL R + +T L + + + F+ +
Sbjct: 352 LPSLEIREGAVDRLVELYKKCVYKTKGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQ- 410
Query: 432 DIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDG-TEEVLNYANYEEYYYS 490
+ ++F K +E + D +L ++ G + + NY+E +
Sbjct: 411 -------RREEQFKARDKARKRQERNQDHGSLNQSAFGASAVGPNSQQRSVGNYKEEAAA 463
Query: 491 DEDEE---------------------WRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQ 529
+ + W F K YY K D A +
Sbjct: 464 LRNRKRTIDQANLDEDEEEDNDEVRLWEDGF-------KDRYYESKFDVASGNQQFRYAV 516
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPFQQL 588
A Y+R + W L YYY GC SW+WY+P+HYAP+ SD + L+ +E G +PF P +QL
Sbjct: 517 ALQYVRGLCWVLKYYYQGCASWNWYFPYHYAPFASDFVNIQGLSTMFEKGTKPFNPLEQL 576
Query: 589 LAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKL 648
+ V PAAS +PEP+ LM+ SPI+++YPE+F DLNGKK W+ V L+PF+DE +L
Sbjct: 577 MGVFPAASSSHVPEPWAKLMSDPESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRL 636
Query: 649 IKAMDAVEHLLTDEERSRNRHGPMLVY 675
KA+ LT EE RN+ G +Y
Sbjct: 637 FKALVPYYDQLTGEEVKRNKRGDNYLY 663
>gi|258571185|ref|XP_002544396.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904666|gb|EEP79067.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1372
Score = 425 bits (1093), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/462 (47%), Positives = 288/462 (62%), Gaps = 79/462 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PKKLFFMAIDGVAPRAKMNQQR RRFR+A +AE+ ++KA
Sbjct: 65 -------FNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTALDAEMAKEKAIR 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YF+ K++ D W+ V VIL
Sbjct: 118 EGVEMPKEDAFDSNCITPGTEFMAKLTKQLKYFINKKVSEDA---------EWQGVEVIL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P Y+PN+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQSKAQPGYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S K ++ E F+LLHL ++R+YLELEF +L+ G L F F +E IIDD++
Sbjct: 229 TFGRQSQKKVKEL---EHQNFYLLHLCIVREYLELEFQELEVEGALKFDFDMERIIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++KVY+EVLP LDGYINE G +NL R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAWMFKVYKEVLPKLDGYINERGRINLDRLGVLLDSL 345
Query: 419 ASFDFEQFREKYADIQYLEGK--MGKKFSDVFHKEKSKEMDP 458
+F F +Y+D ++++ K +G++ D+ K+ + P
Sbjct: 346 GDVEFRFFEAEYSDARWIKSKQNVGEEVQDISRDPKTLTISP 387
Score = 230 bits (587), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 189/652 (28%), Positives = 315/652 (48%), Gaps = 59/652 (9%)
Query: 596 SKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
+K+++PE Y +LMT +SPI+++YP +F D+NGKK +WEAVV IPFI+E +L+ AM
Sbjct: 534 NKKIVPEAYHSLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFINETRLLNAMATK 593
Query: 656 EHLLTDEERSRNRHGPMLVYTYS---NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVH 712
EHLLT EE+SRN G L +T+S ++L FP I + H +E ++Y
Sbjct: 594 EHLLTPEEKSRNSFGVTLKFTHSPDIEFTYPSSLV-GIFPDIPKCHCIE------NVYEL 646
Query: 713 PN----KLRKGLCQDVNLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQD 767
P + GL + + + FP+LK + + ++ V VFQQ SRNE++++
Sbjct: 647 PTMEGLEPYVGLVDGAKVGVEALAGFPSLKTLPHSGQLGFHGVTVFQQESRNETMVVTLM 706
Query: 768 KVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP--VFERAAKDM 825
+ ++ + ++A +GK + + YP L E V V D + + G +
Sbjct: 707 ESEIRARTEIAKAKIGKRVHVGYPFLHEALV--VCVSDELFDYVQVDGEQHIVPIPHGPG 764
Query: 826 QDAFQLSKKSITDGYYTK-LGVDIGNTEVLVYGQPVESR-KYFFGPRGKVTQQRTFIRST 883
Q K + YY+K LG+ IG E +V+ ++ K G K + I +
Sbjct: 765 QIEHWKRKADRIESYYSKRLGMIIGEVESIVHVHVLKGLVKTELGATVKEFAEIPGIET- 823
Query: 884 VTYAYQSAVLN-LQQARESLEYKT--IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENS 940
YA Q V + Q +E + I+E F G + F L +YGS
Sbjct: 824 -DYASQLIVDEVISQDDRFIEREAIPIEEEFPEGTKAFFLGEFNYGS------------- 869
Query: 941 FIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEE 1000
L ++ + LV + VA L ++PL +++ T S ++
Sbjct: 870 --PLHITGHEDGKMFGLVSTIKGSKGTRFRPRAVARSLRLNPLTVAKITSSFSVMSE--- 924
Query: 1001 GAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDH 1060
KR N+GLN+KF K +V+G++RR ++ W ++E+ ++L++ YM +FP+ ++
Sbjct: 925 -GKRVNLGLNLKFEAKKLKVLGYSRRGQSG--WEFSEKAISLLQEYMIKFPDFIAGIQRK 981
Query: 1061 SSDDIYLRDDVFPHQ-GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDT 1119
D++ D +P + ++ +I +WLK E P A +D+ VV IE A D
Sbjct: 982 PQGDLFEPTDFYPPEIAAAKIKEIQTWLKSVEAKNFERVPLEAEQLDSDVVGAIEAAADE 1041
Query: 1120 CEKVEK----QITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRG 1175
+ ++ Q V N + P +L + F L DRV+ +D VP+ +G
Sbjct: 1042 WFRHKRTGIPQKIKGVPRNAVLKPADAEHRLG---NQIFGLGDRVIYAQDSGKVPIATKG 1098
Query: 1176 TIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSY 1225
TI+G+ + T+ + DV+FD F G + RCS RG + A +++NL+Y
Sbjct: 1099 TIVGLTR--TARTVLLDVIFDVSFMSGTTLAGRCSPFRGQTVAASSVLNLTY 1148
>gi|20129299|ref|NP_609082.1| Rat1, isoform A [Drosophila melanogaster]
gi|442626452|ref|NP_001260166.1| Rat1, isoform B [Drosophila melanogaster]
gi|74869864|sp|Q9VM71.2|XRN2_DROME RecName: Full=5'-3' exoribonuclease 2 homolog; AltName:
Full=Ribonucleic acid-trafficking protein 1; Short=dRAT1
gi|10728625|gb|AAF52452.2| Rat1, isoform A [Drosophila melanogaster]
gi|219990665|gb|ACL68706.1| FI04660p [Drosophila melanogaster]
gi|440213467|gb|AGB92702.1| Rat1, isoform B [Drosophila melanogaster]
Length = 908
Score = 425 bits (1092), Expect = e-115, Method: Compositional matrix adjust.
Identities = 270/742 (36%), Positives = 377/742 (50%), Gaps = 145/742 (19%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE------------YQIP--------EFDNLYLDMNGII 40
MGVP FFR++S +YP + E Y+ P EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKQVDADTGRNIYEDPTLPNPNGIEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C+HP D P + E ++ IF I+ LF +++P+KL +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCTHPEDK-PAPK-NEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AKE TEKR + ++
Sbjct: 119 RFRAAKET---------------TEKRLEIARIR-------------------------- 137
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKI 216
E+L +G +LP EK FDSNCITPGTPFM RL + L YFV +
Sbjct: 138 --------EELL-----SRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFVHDRQ 184
Query: 217 TTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLD 276
+ WK + VILS PGEGEHKIMDYIR +++PD++PN +H L G D
Sbjct: 185 NNNP---------AWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGAD 235
Query: 277 ADLIMLGLCTHEPYFSLLREEV------------KFNTKSNKG-GSQIVTP--------- 314
ADLIMLGL THEP F+++REE F + +K G P
Sbjct: 236 ADLIMLGLATHEPNFTIIREEFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPDV 295
Query: 315 ---EETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPN 371
E KF + LS++R+YL+ L+ P L F +S E +DDWV M F +GNDF+P+
Sbjct: 296 PIGAEVKFIFVRLSVLREYLKQ---TLEMPN-LPFEYSFERALDDWVFMCFFVGNDFLPH 351
Query: 372 LPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYA 431
LP L I GA+ L ++Y++ + GY+ + G +NL R + +T L + + + F+ +
Sbjct: 352 LPSLEIREGAVDRLVELYKKCVYKTRGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQ- 410
Query: 432 DIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDG-TEEVLNYANYEEYYYS 490
+ ++F K +E + D +L ++ G + + NY+E +
Sbjct: 411 -------RREEQFKARDKARKRQERNQDHGSLNQSAFGASAVGPNSQQRSVGNYKEEAAA 463
Query: 491 DEDEEWRTNFFSEFGQH----------------KTDYYHYKLDYAKVTNEVLRDQAECYI 534
+ + RT+ + K YY K D A + A Y+
Sbjct: 464 LRNRK-RTSDMANLDDEDEEENNDEVRLWEDGFKDRYYESKFDVAPGNQQFRYAVALQYV 522
Query: 535 RAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPFQQLLAVLP 593
R + W L YYY GC SW+WY+P+HYAP+ SD + L+ +E G +PF P +QL+ V P
Sbjct: 523 RGLCWVLKYYYQGCASWNWYFPYHYAPFASDFVNIQGLSTMFEKGTKPFNPLEQLMGVFP 582
Query: 594 AASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMD 653
AAS +PEP+ LM+ SPI+++YPE+F DLNGKK W+ V L+PF+DE +L KA+
Sbjct: 583 AASSSHVPEPWAKLMSDPESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALV 642
Query: 654 AVEHLLTDEERSRNRHGPMLVY 675
LT EE RN+ G +Y
Sbjct: 643 PYYDQLTGEEVKRNKRGDNYLY 664
>gi|378727731|gb|EHY54190.1| phosphodiesterase/alkaline phosphatase D [Exophiala dermatitidis
NIH/UT8656]
Length = 1413
Score = 424 bits (1091), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/448 (47%), Positives = 284/448 (63%), Gaps = 77/448 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEEK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PKKLFFMAIDGVAPRAKMNQQR RRFR+A +AE +KA +
Sbjct: 65 -------FNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTALDAEKAREKAIK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YF+ K++ D W+ V V+L
Sbjct: 118 EGLEMPKEDPFDSNCITPGTEFMAKLTKQLKYFISKKVSEDV---------DWQGVEVVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P Y+PN+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQAKAQPGYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F ++ K ++ E F+LLHL ++R+YLELEF +L++PG LSFPF +E IIDD++
Sbjct: 229 TFGRQATKKSKEL---EHQNFYLLHLCIVREYLELEFQELEQPGALSFPFDMERIIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL L+++ Y+EVLP + GYINE G +NL+R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALALMFQKYKEVLPKMGGYINEQGVINLERLGVLLDAL 345
Query: 419 ASFDFEQFREKYADIQYLEGKMGKKFSD 446
+ ++ F +YAD +++ K + +D
Sbjct: 346 SEVEYRFFESEYADAKWINAKRNAQLND 373
Score = 357 bits (915), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 246/774 (31%), Positives = 392/774 (50%), Gaps = 83/774 (10%)
Query: 494 EEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSW 553
++ + + ++F + K YY K D+ +E LR AE Y++ +QW L YYY G SW W
Sbjct: 500 QDMKKKYDAKFLEWKDKYYREKFDWGLDNDEELRKLAENYVQGLQWVLFYYYRGIASWPW 559
Query: 554 YYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENS 613
+Y +HY+P ISDIK +L +++G+PF PFQQL+ VLP SK+++PE Y LMT ++S
Sbjct: 560 FYQYHYSPMISDIKKGLGADLNFQLGQPFKPFQQLMGVLPDRSKKIVPEVYHELMTSKDS 619
Query: 614 PILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPML 673
PI+++YP +F D+NGKK +WEAVV IPFIDE +L+KAM+ + LL+++ER RN G L
Sbjct: 620 PIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLKAMEPKDALLSEDERVRNDFGVSL 679
Query: 674 VYTYS---NVNLGTALAPDYFPAINENHAVEKPLYRDDI-----YVHPNKLRKGLCQDVN 725
+ YS + ++L FP + H ++ + YV GL + V
Sbjct: 680 KFVYSPEVDYTYPSSLV-GIFPDLPHCHCIQNEFELPTMDGLEPYV-------GLVEGVK 731
Query: 726 L-KLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGK 784
L + FP+LK + FT + V VFQQ SRNES+II + + + A ++L +
Sbjct: 732 LGAAALAGFPSLKTLPFTGSLGFHGVNVFQQDSRNESMIITLLDTETRTKVEYAKKLLNQ 791
Query: 785 TIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQ---------DAFQLSKKS 835
+F+ YP L E ++ V + FD S E A D+Q D F +
Sbjct: 792 RVFVGYPFLQEAKIVKVLDE----LFDYTSP---EHAPTDVQATEHAGHEIDQFHKKAER 844
Query: 836 ITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNL 895
I Y +LG+ G+ E LV + ++ K K+ T YA + +
Sbjct: 845 IEKWYSKRLGMLTGDIESLVQVEMLKGLK-------KLDDGST----VKEYAEMPGLETV 893
Query: 896 QQARESLEYKT-------------IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFI 942
A+ +E+ I+E F G F L + +G +S V EN +
Sbjct: 894 HPAQLVVEHVISEDVRFIEKAALPIEEEFPDGTNAFFLGDYAFGR---PVSVVGHENGKL 950
Query: 943 K--LSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEE 1000
K ++ ++ + + LQ + + Y+PSY VA L+++ L+L++ T S S
Sbjct: 951 KCLIALSTARQVEFGREIALQAERLSPYVPSYQVARSLNLNALVLAKITSSF----SVRV 1006
Query: 1001 GAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDH 1060
+R N+GLN+KF K +V+G++R+ ++ W +++ + LIK YM +FPE + ++
Sbjct: 1007 DDQRVNLGLNLKFEAKKLKVLGYSRKGQSG--WEFSQAAIELIKQYMIKFPEFIAGIHNN 1064
Query: 1061 SSDDIYLRDDVFPHQGEQ----RVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHA 1116
D+ FP E+ +V +I++WLKE E P A +D+++V IE A
Sbjct: 1065 PQGDMLPVTAYFPGMDEKDAKAKVKEILAWLKEIESKSFEKVPLEAEQLDSEIVKRIEQA 1124
Query: 1117 VDTCEKVE----KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLG 1172
D + E + V N L P +L + +F L DRV+ + D VP+
Sbjct: 1125 ADEALRSEPPPQNKTIGGVPRNALLKPSDAQWRLG---NQRFALGDRVIYVADSGKVPIA 1181
Query: 1173 YRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
+GT++G+ Q T+ + DVVFD F G + RCS RG +P +++NL+
Sbjct: 1182 SKGTVVGLTQ--TTRETFLDVVFDVSFMSGTSLGDRCSPFRGSTVPTWSVLNLT 1233
>gi|407420481|gb|EKF38586.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi marinkellei]
Length = 1446
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 347/1200 (28%), Positives = 557/1200 (46%), Gaps = 200/1200 (16%)
Query: 125 EKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLP 184
EK F+ I P+K FF+A+DGVAPRAKMNQQR RR+RS + V Q+A +GE +P
Sbjct: 69 EKLFNVIQ-----PRKYFFLAVDGVAPRAKMNQQRQRRYRSGYDLMVARQEAIAQGEEVP 123
Query: 185 TEKR-FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHET 243
EK FDSNCITPGT FM R+ +QL+YF+ +KI D W++ V+ SGH++
Sbjct: 124 DEKDVFDSNCITPGTNFMVRVSEQLQYFITMKIAMDP---------AWQNCQVVYSGHDS 174
Query: 244 PGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF--N 301
PGEGEHKI+D+IR K +P+Y+PN HC+YGLDADL+ML L THEP+F LLRE V F
Sbjct: 175 PGEGEHKIVDFIRRRKMQPEYSPNETHCMYGLDADLVMLSLATHEPHFLLLREVVTFGPG 234
Query: 302 TKSNKGGSQ--------IVTPEETK----FFLLHLSLMRDYLELEF-GKLKEPGVLSFPF 348
+S + Q IV + + F L H++++RDYL+L+ GKL L +
Sbjct: 235 QESRRAREQREEDEANGIVADKSYRKADEFVLFHVNVLRDYLDLDVRGKLG--AKLPANY 292
Query: 349 SIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNL 408
+E ++DD+VLM F +GNDF+P +P L I +G+L + +Y + + Y+ G +N
Sbjct: 293 DLERVLDDFVLMCFFVGNDFLPTIPTLGIHDGSLLQMIDLYCKCILVEGVYLTNQGQINW 352
Query: 409 KRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDP--DLAALIKA 466
+ E +L ++ + + + + + KM ++ DP + AA+ A
Sbjct: 353 RAVELWLQGISELELTTIKARQQQEEEYQRKMTRR-------------DPTHEAAAITSA 399
Query: 467 TDDDYDDGTEEVLNYANYEEYYYSDE---DEEWRTNFFSEFGQHKTDYYHYKLDYAKVTN 523
+ D Y+E +Y ++ D+ W G+ D +
Sbjct: 400 HIESIRD----------YKERFYREKHGFDKGWDPQ-----GKEMADLRLH--------- 435
Query: 524 EVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEM--GEP 581
Y+ + W + YYY G SW W++PHHYAP SD+ + + + E G+P
Sbjct: 436 ---------YVEGLMWVMGYYYQGPPSWKWFFPHHYAPMASDLVNLPAIAARVEFDPGKP 486
Query: 582 FLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIP 641
FLP QQLLAVLP S +P Y LM + SP+ ++PE D + WE +VLIP
Sbjct: 487 FLPHQQLLAVLPPMSYRSMPRAYWPLMLSDKSPLKRFFPEILQIDRENARAPWEGIVLIP 546
Query: 642 FIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVE 701
FI+E L+ A +V++ + E+ NR GP ++ Y + +AP P +++
Sbjct: 547 FIEERVLLAAYQSVQNKVEPEDEVHNRLGPATLFAYD-----SDMAPCDVP-----NSMF 596
Query: 702 KPL----YRDDIYVHP--NKLRKGLCQDVNLKL-YVTHFPTLKHVQFTHKI--ENAKVKV 752
PL R ++ P LC V + + F TL+ I E+ V +
Sbjct: 597 GPLRNVRVRRQVFEFPPIKTFVPRLCPGVAIGAKQLEGFATLRSKWDCIDIRRESGVVTI 656
Query: 753 FQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFD 811
F P+R ES+I+ +++ + S A ++G+ + + +PH RV +++ K +
Sbjct: 657 FGMPTRKESVILALRNSINYTSATD-AVSLVGQEVLVGFPHYRRARVTSISDKRISVRAV 715
Query: 812 KNSGPVF---ERAAKDMQDAFQLSKKSITDGYYT--KLGVDIGNTEVLVYGQPVESRKYF 866
F E + ++ +K+ T Y K+G+ + ++LVY + +
Sbjct: 716 MTQDGAFCGTENKELNRDESLNFAKECETHIQYMKEKIGIAVDGIQLLVYVNLFSTMR-- 773
Query: 867 FGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQAR--ESLEYKTID----------EIFYPG 914
+G++ R+F + V YA Q V LQ E L Y D ++ + G
Sbjct: 774 LTRKGRIV--RSFSKDEVCYAMQ-LVARLQDVDMIEDLRYVERDRVEGEMSLGNKVVFIG 830
Query: 915 CQCFALSNPH--YGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSY 972
+ +P YGS G V + + ++ ++ QEP + L N++ +
Sbjct: 831 PEPKNKKSPMQVYGSAGLVFESASSNSDIYAVAVRLYQEPLVIPPSLLSFAAPRNWMALH 890
Query: 973 TVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRK---------------- 1016
VA+++S+ L L GS + +T + R +GL + ++R
Sbjct: 891 EVATEISVGSLALRLLVGS---LRTTPQYGSRE-VGLGLIYARNHLARIGYAKLVPRQTN 946
Query: 1017 -----NEEV-----------------------VGFTRRDETTKKWFYTEQVVTLIKNYMK 1048
NE+V +G + R WF + + V LI+ Y++
Sbjct: 947 AWTPYNEDVFARLAQNAEPAAHYLDNAGKGDFLGRSSRTPQYTTWF-SREAVALIRRYVQ 1005
Query: 1049 QFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPH--AKAEVRPCG--AAV 1104
+F + L+ ++ L F G+ + ++ L E + + +R AA
Sbjct: 1006 EFQPLVKRLESGTAAPQALEPPQF-MTGKWQEVEVDDVLTEMENFIESSGIRDVALIAAS 1064
Query: 1105 VDAKVVSLIEHAVDTCEKVEKQIT--LFVKP---NKLYIP-----KPTLDKLCPDPDTKF 1154
DA + D ++ + + T L + P LY P + +L D F
Sbjct: 1065 DDAFTRDHLRELEDELDRQQPRPTKELILNPVVKRHLYFPLTHSSGGHITQLPLPQDQIF 1124
Query: 1155 KLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRG 1212
+L RVVN R +VP G GTI+ ++ TS+DA +VV+D+PF G R + RG
Sbjct: 1125 RLGARVVNCRAVGSVPFGAVGTIVRLLA--TSHDA--EVVYDEPFTGGSHFDGRLRQPRG 1180
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/127 (56%), Positives = 92/127 (72%), Gaps = 2/127 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEKQ 59
MGVPKFFR+++ERYP + R+ P DNLYLDMNGIIHNC+H ND D + TEK
Sbjct: 1 MGVPKFFRWVAERYPTVITPFRDSP-PPVDNLYLDMNGIIHNCTHTNDVDATQKSPTEKA 59
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ + +F Y+E LF +IQP+K FF+A+DGVAPRAKMNQQR RR+RS + V Q+A +G
Sbjct: 60 MMEAMFAYLEKLFNVIQPRKYFFLAVDGVAPRAKMNQQRQRRYRSGYDLMVARQEAIAQG 119
Query: 120 ERLPTEK 126
E +P EK
Sbjct: 120 EEVPDEK 126
>gi|388851631|emb|CCF54627.1| probable KEM1-multifunctional nuclease [Ustilago hordei]
Length = 1481
Score = 421 bits (1083), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/442 (48%), Positives = 274/442 (61%), Gaps = 76/442 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFR++SERYP +S+++ E +IPEFDNLYLDMNGIIHNCSHPND+D FRITE QI
Sbjct: 1 MGIPKFFRFMSERYPLISQLIEENKIPEFDNLYLDMNGIIHNCSHPNDSDASFRITETQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F +F YIE LF I+PKK+FF+A+DGVAPRAKMNQQR RRFR+AKEA+ +++KA+ +GE
Sbjct: 61 FLAVFAYIEHLFHKIKPKKVFFLAVDGVAPRAKMNQQRSRRFRTAKEAKEIKEKAERRGE 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
LP E+ FD C FM AK++QQ
Sbjct: 121 VLPEEEAFD----SNCITPGTPFM--------AKLSQQ---------------------- 146
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
L YF+ KIT D W++V VILS
Sbjct: 147 ---------------------------LEYFIAKKITEDA---------DWRNVQVILSA 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
H+ PGEGEHKIM+YIR K++PDYNPN+RHCLYGLDADLIMLGL +H+P+F LLREEV+F
Sbjct: 171 HDVPGEGEHKIMEYIRLCKAQPDYNPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVQF 230
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
+ GS E FFLLHLSL R+YL+LEF L+ L F + E IIDD++L+
Sbjct: 231 GPRRKSKGSL----ESQNFFLLHLSLFREYLDLEFQDLRSS--LPFTYDFERIIDDFILL 284
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
+GNDF+P+LP LHI GA+ LL+ +Y+++LP GY+NE G L R E L +L
Sbjct: 285 DIFVGNDFLPHLPGLHINEGAIDLLFSIYKQILPVAGGYLNESGNLRTDRLELVLAELCK 344
Query: 421 FDFEQFREKYADIQYLEGKMGK 442
F+ EQF Y D + K+ K
Sbjct: 345 FEMEQFERDYGDTATHKAKISK 366
Score = 317 bits (811), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 228/778 (29%), Positives = 381/778 (48%), Gaps = 61/778 (7%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCV 549
+D +E+++ + K DYY KL+ +E + A YI +QW LHYYY+G
Sbjct: 528 ADPEEDYKKRLDVQMTAWKKDYYKEKLEIDYSDDEAMGKLAFRYIEGLQWVLHYYYDGVA 587
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMT 609
SW W+Y +HYAP ISD+K+ + ++E+G+PF PF QL+ VLPA S + +P +++LMT
Sbjct: 588 SWGWFYDYHYAPKISDLKNVGEMKFEFELGKPFRPFDQLMGVLPALSNQHIPFAFRDLMT 647
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
NSPI+++YP F DLNGKKQDWEAVV IPFIDE +L+ A++ E L EER RN
Sbjct: 648 DPNSPIIDFYPSNFEADLNGKKQDWEAVVKIPFIDEKRLLDALNKREIYLGIEERKRNGF 707
Query: 670 GPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLK 727
G +TY+ V + P FP + A K D + L KGL + V L
Sbjct: 708 GSSREFTYNEVEQIFFPSSLPGTFPDLVHCRANVKDF--DLPTLDGLHLVKGLTKGVELG 765
Query: 728 L-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGKT 785
+ + FP+LK + ++ + V VFQ S+ S+++ +++ + + +A+ ++G
Sbjct: 766 VRALAGFPSLKTLPHYGRLGHHGVNVFQSESKGVSMVVTIENAYEDAKTEAIAEAMIGNR 825
Query: 786 IFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLS----KKSITDGYY 841
F+N+P L E V V+ R G ++ LS K + +Y
Sbjct: 826 AFLNWPFLTEGLVVGVSDNLFRYEMGMVGGQ--KKVVATPHQGASLSDFHRKAERAEYHY 883
Query: 842 TK-LGVDIGNTEVLVYGQPVESRK----------YFFGPRGKVTQQRTFIRSTVTYAYQS 890
+K +GV IG+ +VLV+ +P++ K Y P+ ++ Q ++ TVT
Sbjct: 884 SKHMGVLIGDVDVLVHVRPLKGLKRLDDGAFIKDYEESPKKEIDQA---VQVTVTNVIHD 940
Query: 891 AVLNLQQARESL--EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSF-- 946
L+ + + EY ++F+ G YG+ V+ + + + F
Sbjct: 941 DARLLESPAKPIREEYPDKTKVFFLGAGA-------YGTPAHVVGSTDASLAIEMVFFPN 993
Query: 947 KVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHN 1006
+V++ L +LV Y PSY VA I+ L L++ T S+ + + + N
Sbjct: 994 QVKENAYLRNLV--VSRARVQYYPSYQVAKWCGITSLALAKLTSSMTLAWKDQ----KVN 1047
Query: 1007 IGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIY 1066
+GL++KF K E+V+G++R+ + W ++E+ + L+K Y+K FPE+ L S DI
Sbjct: 1048 VGLSLKFEAKGEKVLGYSRK--SAAGWEFSEKTLELVKEYVKTFPEIASMLSHKSGVDIT 1105
Query: 1067 LRDDVFPH-QGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEK 1125
++ Q + ++AQ+ W+K + E P A + + IE
Sbjct: 1106 RASQIWDESQVDAKMAQLKDWIKAKGVRDLETVPLYAEQLSRDTIQNIEAFTSRLVDTRT 1165
Query: 1126 QITLFVKPNKLY---IPKPTLDKLCPDP----DTKFKLFDRVVNIRDCYTVPLGYRGTII 1178
I + +++ IP+ L K P +F+L DRV+ +++ VPL RG ++
Sbjct: 1166 AIGAASQVKRVFMKGIPRTALLKPSHAPFRLQAQRFELGDRVIMVQESGNVPLSARGVVV 1225
Query: 1179 GIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSN 1234
GI +VVFD F G + RC+ +G + +++NL+ + +C ++
Sbjct: 1226 GITSN------ALEVVFDVLFLSGTTLGDRCAPYKGATVSFVSVLNLTQPQFVCAGTS 1277
>gi|66819171|ref|XP_643245.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
gi|60471408|gb|EAL69368.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
Length = 1749
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 355/1212 (29%), Positives = 565/1212 (46%), Gaps = 193/1212 (15%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P KLF+MAIDGVAPR+K+NQQR RRF S E L+QK +G+ +P E F+ ITPG
Sbjct: 76 PTKLFYMAIDGVAPRSKINQQRQRRFLSVHRDEKLKQKLISEGKPVP-EVIFNRTAITPG 134
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM L + +++++K KI+ D LS W++V VI SG E PGEGEHKI+DYIR
Sbjct: 135 TQFMYNLSESIQFYIKKKISED------LS---WREVRVIFSGPENPGEGEHKIIDYIRK 185
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K+ PD++ N HCLYGLDADLI+LGL THEP FS+LREE+ F T +
Sbjct: 186 NKASPDWDANQSHCLYGLDADLILLGLITHEPNFSILREEISFKP----------TKRQL 235
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F LLH+SL+R+YL+LE L F + +E IIDD++L+ GNDF+P+LP L I
Sbjct: 236 DFQLLHISLLREYLDLELRN----DDLEFGYDLERIIDDFILIMIFFGNDFLPHLPFLEI 291
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFR------EKYA 431
G L ++++Y+ LP+L GY+ EG ++L+R + F L F+ +Q + E+
Sbjct: 292 SKGGLNSIFELYKSSLPSLGGYLTEGATIDLERLQHFFKFLQKFEKKQQQGIMGSTEEDL 351
Query: 432 DIQYLEGKMGKKFSDVFHKEKSKEMDPDLAAL----------IKATDDDYDDGTEEVLN- 480
D + +E + S + H +E + L + ++D +D E+++N
Sbjct: 352 DDKKVEVAELVEDSVLEHDGLDEEAKKEFERLAMERLKSHFPVSDSEDGEEDPDEQLVNE 411
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
N E YY +F+EF LD K E + Y+ + W
Sbjct: 412 LYNVENSYYR--------QYFNEFPN--------TLDEIKAFKEKV---VLSYVEGLVWV 452
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
L+YY+NGC+SW W+YP +YAP D + L++ ++ GEP PFQQLL+VLP S +L+
Sbjct: 453 LNYYHNGCISWVWFYPFYYAPLAIDFNNIPDLHIDFQPGEPITPFQQLLSVLPPQSVDLI 512
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV----- 655
P+ YQ LM SPI+++YP EF D ++ + + FID +L+ A ++
Sbjct: 513 PKSYQTLMLDLFSPIIDFYPVEFEIDTKDPHY-FDGIAELGFIDHQRLLDATASIKKSLA 571
Query: 656 ---EHLLTDEERSRNR-HGPMLVYTYSNVN-LGTALAPDYFPAINENHAVEKPLYRDDIY 710
+ + TDEE +RN +++Y ++V+ + + F I + A + +
Sbjct: 572 QSGQKVFTDEEEARNSIKNAVIIYHDADVDQFVKSPNSNVFKDIEHSSATTEDIVLPTFD 631
Query: 711 VHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIV----- 765
R Q + + FPT K +QFT K +N+ + V+ SR +S+I+V
Sbjct: 632 NPLPHFRYCADQVLTGVQCPSGFPTFKSLQFTWKYQNSVIDVWGMMSRKDSLIVVPPHQS 691
Query: 766 --QDKVQVPSLKQVADQILGKTIFINYPHLIEIRV---------------------QAVA 802
D + ++ ++GK +IN+P+ E ++ Q +A
Sbjct: 692 KQYDCNNIDEFSKLKS-LIGKKCYINWPYHQEGKILYFSCSNRKLFSKGTTDNSTPQKLA 750
Query: 803 ----TKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQ 858
K +++S + ++ KD D Q S S T +KLG + NT +LV+
Sbjct: 751 FLDHVKKTKLSLLRKGINIYYDNEKD--DGKQQSNGSSTGYTASKLGYEDTNT-ILVHIN 807
Query: 859 PVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKTIDEI-----FYP 913
+ + P G + ++ + Y + V A +S ++ IDE+ F
Sbjct: 808 KLVGVQTM--PNG--STKKRYSDEEDVYPIELMVDYDLIATDS-RFEEIDELPFEKRFPI 862
Query: 914 GCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYT 973
G + ++G+ G VI+ + ++L KV + H Y P
Sbjct: 863 GKKVLVTKKQYFGTIGTVINHYDNQ---LQLEIKVPSVKMDMNFGHQVAKKEVEYFPIQH 919
Query: 974 VASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTK-- 1031
VA + + +S+ T +FI + IGLN+KF+ + ++V+G+ R + +
Sbjct: 920 VAKLVGTTVSSISQLTAGLFIFKPMVD------IGLNLKFTGRQQQVLGYCRGYDVNRGG 973
Query: 1032 ----KWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYL---------RDDVFP----- 1073
+W ++++ + LI Y +FP + L S D + D+ P
Sbjct: 974 NIFHQWEFSQEAINLITEYFNKFPLLHQILALFSKPDSNIGVGGAKMSKNVDITPLFATK 1033
Query: 1074 HQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIE-------HAVD-TCEKVEK 1125
+ + + + ++++ K V PCG + + + IE H + T +++
Sbjct: 1034 EEKAEFLQGVEEFIEKSGIRKKRVVPCGTDSLGKEGIEKIEKYYYDQTHQTEYTIQEIHC 1093
Query: 1126 QITLFVKP----NKLYIPKPTLDK-LCPDPDT--------------------------KF 1154
T V+P + + + + L K L P D KF
Sbjct: 1094 STTDIVEPPSYESVISMERHHLIKGLQPKQDLNNSQNGVKSPTLSSQNYSFQSFANTGKF 1153
Query: 1155 KLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIR--CSESRG 1212
L DRVV+I D +P G GT+ I D DVVFD G + CSE RG
Sbjct: 1154 HLGDRVVSILDKGNLPFGTFGTVASI------QDQKVDVVFDTECFAGNSLDGYCSEKRG 1207
Query: 1213 YRMPAQAMINLS 1224
+ + NLS
Sbjct: 1208 ICISKLRLYNLS 1219
Score = 131 bits (330), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP+FFR++SERYP + + + + PE+DNLYLDMNGIIH CS N +E+++
Sbjct: 1 MGVPRFFRWVSERYPQILQKILDSNPPEYDNLYLDMNGIIHACSQEFANS-LIEFSEEEL 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ + +Y++ LF I+P KLF+MAIDGVAPR+K+NQQR RRF S E L+QK +G+
Sbjct: 60 IRQVCNYVDRLFHTIRPTKLFYMAIDGVAPRSKINQQRQRRFLSVHRDEKLKQKLISEGK 119
Query: 121 RLP 123
+P
Sbjct: 120 PVP 122
>gi|326914793|ref|XP_003203707.1| PREDICTED: 5'-3' exoribonuclease 2-like [Meleagris gallopavo]
Length = 985
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 262/772 (33%), Positives = 370/772 (47%), Gaps = 182/772 (23%)
Query: 1 MGVPKFFRYISERYPCL------SEVVREYQIP--------------EFDNLYLDMNGII 40
MGVP FFR++S +YP + E +E EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNRVEGERAKECNGVKASVDTSRPNPNEVEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C+HP D P + E ++ IF YI+ +F +++P++L +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCTHPEDK-PAPK-NEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEA-EVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQR 159
RFR++KE E E+K K + E +A G+ P
Sbjct: 119 RFRASKEGMEAAEEKQKIRQE----------------------ILAKGGILP-------- 148
Query: 160 GRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTD 219
++ KE RFDSNCITPGT FM L + LRY++ ++ +D
Sbjct: 149 -------------PEEVKE---------RFDSNCITPGTEFMDNLAKCLRYYIADRLNSD 186
Query: 220 KLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADL 279
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADL
Sbjct: 187 P---------GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADL 237
Query: 280 IMLGLCTHEPYFSLLREEVKFNTK-----SNKGGSQI--------------------VTP 314
IMLGL THEP F+++REE K N N+ G ++ +
Sbjct: 238 IMLGLATHEPNFTIIREEFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADSLPA 297
Query: 315 EETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPD 374
E +F + L ++R+YLE E L F F E +DDWV M F +GNDF+P+LP
Sbjct: 298 SEQEFIFIRLCVLREYLERELTM----ASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPS 353
Query: 375 LHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD-- 432
L I GA+ L +Y+ V+ GY+ E G++NL+R + + + + F+++ D
Sbjct: 354 LEIREGAIDRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDD 413
Query: 433 -----------------------IQYLEGKMGKK-------------FSDVFHKEKSKEM 456
Q+ +G + F H ++ M
Sbjct: 414 NFKRRQKEKKKRMKRDHPSFIPGGQFSPQALGNRSSPQAISNPRQAAFEMRMHDRQNSTM 473
Query: 457 -----------DPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFG 505
P A IK +D D E N +E W+ ++
Sbjct: 474 SSPNTSLNSDGSPSPARGIKRKSEDSDSEPEPEDNIRLWE--------SGWKQRYYKN-- 523
Query: 506 QHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISD 565
K D + R + Y+ + W L YYY GC SW+WYYP HYAP+ SD
Sbjct: 524 ---------KFDVDASDEKFRRKVVQSYVEGLCWVLRYYYQGCASWNWYYPFHYAPFASD 574
Query: 566 IKDFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFA 624
+ + + +E G +PF P +QL+ V PAAS LP ++ LMT S I+++YPE+FA
Sbjct: 575 FEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPTWRKLMTDPESSIIDFYPEDFA 634
Query: 625 TDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
DLNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 635 IDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVLFV 686
>gi|195438180|ref|XP_002067015.1| GK24252 [Drosophila willistoni]
gi|194163100|gb|EDW78001.1| GK24252 [Drosophila willistoni]
Length = 924
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 272/756 (35%), Positives = 377/756 (49%), Gaps = 169/756 (22%)
Query: 1 MGVPKFFRYISERYPCL---------------SEVVREYQIP-----EFDNLYLDMNGII 40
MGVP FFR++S +YP + + +P EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKKLDPETGKNTYEDSTLPNPNGLEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C+HP D P + E ++ IF I+ LF +++P+K+ +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCTHPEDK-PAPK-NEDEMMVAIFECIDRLFGIVRPRKVLYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEA-------EVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRA 153
RFR+AKE E + ++ KG +LP EK
Sbjct: 119 RFRAAKETIEKRAEIERIREELMTKGCKLPPEK--------------------------- 151
Query: 154 KMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVK 213
EKGE FDSNCITPGTPFM RL + L Y+V
Sbjct: 152 ------------------------EKGE------HFDSNCITPGTPFMDRLSKCLHYYVH 181
Query: 214 LKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLY 273
++ + WK V VILS PGEGEHKIMDYIR +++PD++PN +H L
Sbjct: 182 DRLNNNP---------AWKGVKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLC 232
Query: 274 GLDADLIMLGLCTHEPYFSLLREEV------------KFNTKSNKG------GS------ 309
G DADLIMLGL THEP F+++REE +F + +K GS
Sbjct: 233 GADADLIMLGLATHEPNFTIIREEFLPNKPRPCDVCNQFGHEMDKCMGLNAIGSTSAANF 292
Query: 310 --QIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGND 367
+ E KF + LS++R+YL+ K E L F + E +DDWV M F +GND
Sbjct: 293 KPDVPIGAEVKFIFVRLSVLREYLK----KTLEMPNLPFAYDFERALDDWVFMCFFVGND 348
Query: 368 FIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFR 427
F+P+LP L I GA+ L ++Y++ + GY+ + G +NL R + +T L + + + F+
Sbjct: 349 FLPHLPSLEIREGAVDRLVELYKKCVYKTQGYLTDSGDVNLDRVQLIMTDLGNAEDQIFK 408
Query: 428 EKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAAL------IKATDDDYDDGTEEVLNY 481
++ + K+F D K+K E + D+ +L +A DG + NY
Sbjct: 409 DRQ--------RREKQFRDREKKKKQWERN-DMKSLEQSVFGPQAVGAGKGDGPTNIQNY 459
Query: 482 ---------------------ANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAK 520
A E+ +DE W F K YY K D
Sbjct: 460 KAEAAALRLGQKRSGADAGLQAEEEDEDCNDEVRLWEDGF-------KNRYYESKFDVGP 512
Query: 521 VTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG- 579
+ A Y+R + W L YYY GC SW+WY+P+HYAP+ SD + L+ +E G
Sbjct: 513 DNLQFRYAVALQYVRGLCWVLKYYYQGCSSWNWYFPYHYAPFASDFVNIQGLSTLFEKGT 572
Query: 580 EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVL 639
+PF P +QL+ V PAAS +P+P+ LM+ SPI+++YPE+F DLNGKK W+ V L
Sbjct: 573 KPFNPLEQLMGVFPAASSSHVPQPWVELMSSPTSPIIDFYPEDFKIDLNGKKFAWQGVAL 632
Query: 640 IPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
+PF+DE +L KA+ LT EE RN+ G +Y
Sbjct: 633 LPFVDEKRLFKALVPFYEQLTSEEVKRNKRGNNYLY 668
>gi|169776419|ref|XP_001822676.1| exonuclease Kem1 [Aspergillus oryzae RIB40]
gi|83771411|dbj|BAE61543.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1409
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/469 (46%), Positives = 292/469 (62%), Gaps = 79/469 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S ++ E +IPEFDNLYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENRIPEFDNLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I + PKKLFFMAIDGVAPRAKMNQQR RRFR+A +AEV ++KA
Sbjct: 65 -------FNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTALDAEVAKEKAIS 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YF+ KI+ DK W+ V ++L
Sbjct: 118 QGIEMPKEDAFDSNCITPGTEFMAKLTEQLKYFINKKISEDK---------DWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR+ K++P Y+PN+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F + K ++ E F+LLHL ++R+YLELEF +L+ VLSF F +E +IDD++
Sbjct: 229 TFGRQVQKKPKEL---EHQNFYLLHLCMVREYLELEFQELERTDVLSFSFDMERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL L+KVY+E+LP + GYINE G +N++R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAFLFKVYKEILPKMGGYINEQGVINMERLGMLLDGL 345
Query: 419 ASFDFEQFREKYADIQYLEGKM--GKKFSDVFHKEKSKEMDPDLAALIK 465
+ +F F +Y+ ++++ K G+ S+ + KS + P L+K
Sbjct: 346 SDVEFRFFEAEYSGERWIQAKKNGGENNSESQERPKSFTITPAQKNLLK 394
Score = 335 bits (859), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 241/772 (31%), Positives = 384/772 (49%), Gaps = 47/772 (6%)
Query: 482 ANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNL 541
A +E D + + +F + K+ YY K ++ +E +R E Y++ +QW L
Sbjct: 484 AKVQELSAEDAQKAAEKKYEEKFQEWKSKYYTGKFEWGLDNHEEMRKLTENYVQGLQWVL 543
Query: 542 HYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLP 601
+YYY G SW W++ +HYAP ISD+K + +++G+PF P+ QL+ VLP SK+++P
Sbjct: 544 YYYYRGIASWPWFFQYHYAPMISDVKKGLKADTNFQLGQPFRPYDQLMGVLPDRSKKIVP 603
Query: 602 EPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTD 661
Y++LMT SPI+++YP +F D+NGKK +WEAVV IPFI+E +L+ A+ EHLLT
Sbjct: 604 AAYRDLMTSPESPIVDFYPRDFELDMNGKKMEWEAVVKIPFIEEKRLLDALKTKEHLLTP 663
Query: 662 EERSRNRHGPMLVYTYS-NVN-LGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----K 715
EE++RN G L +TYS +V + + P FP I H +E +I+ P +
Sbjct: 664 EEKARNGFGASLKFTYSPDVQFIYPSSLPGVFPDIPNCHCIE------NIFDLPTMDGLE 717
Query: 716 LRKGLCQDVNLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSL 774
GL L + FP+LK + ++ V VFQQ SRNES++I S
Sbjct: 718 PYIGLVDGAQLGASALAGFPSLKTLPHVGQLGFHGVCVFQQESRNESMVITVLDPGSRSS 777
Query: 775 KQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKK 834
+A Q LG+ +F+ YP L E V V D + K G + + KK
Sbjct: 778 SLLAKQKLGQRVFVGYPFLQEAYV--VRVSDELFDYIKPEGEEHVVNIPHTEAQIEQWKK 835
Query: 835 ---SITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQ- 889
I Y +LG IG E +V+ Q + + G ++ I T YA Q
Sbjct: 836 KADKIEGTYSRRLGTIIGPVEAMVHVQLL--KGLLKTDEGATVKEFADIPGQETDYALQL 893
Query: 890 --SAVLNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFK 947
V+N + + I+E F G + F L + +YG + + + + + K
Sbjct: 894 VVGEVINPDERFIERDALPIEEEFPEGSRAFFLGDFNYGRPMHITGHSNGKVNGLIAAVK 953
Query: 948 VQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNI 1007
+EP+ + Y+PSY +A L ++PL+L++ T S F +D +R N+
Sbjct: 954 -GREPEFGKERARDAERFCPYMPSYAIARSLQLNPLVLAKIT-SAFSVDVE---GQRVNL 1008
Query: 1008 GLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYL 1067
GLN+KF + ++V+G++RR ++ W ++ + V L++ YM +FPE ++ + D Y
Sbjct: 1009 GLNLKFEARKQKVLGYSRRGDSG--WEFSPKAVELLQQYMIKFPEFIAGIQRNPQGDRYK 1066
Query: 1068 RDDVFPHQ-GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQ 1126
D +P + +V +I WLK E P A +D+ +V LIE D ++ Q
Sbjct: 1067 PTDFYPEETALLKVKEIREWLKSIEAKNFERVPLDAEQLDSDIVKLIEQDADQL--IQNQ 1124
Query: 1127 ITLFVKP------NKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI 1180
+ K + L P +L + F+L DRVV +D VP+ RGT++G+
Sbjct: 1125 PAMQAKKVGGVPRSALLRPSDVEQRLG---NQTFRLGDRVVYAQDSGKVPIATRGTVVGL 1181
Query: 1181 VQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLC 1230
+ TS + DVVFD F G + RCS RG + + +++N+SY + L
Sbjct: 1182 TR--TSRALLLDVVFDVSFMSGTTLGDRCSPFRGQTVLSSSVLNVSYRQLLA 1231
>gi|238503103|ref|XP_002382785.1| exonuclease Kem1, putative [Aspergillus flavus NRRL3357]
gi|220691595|gb|EED47943.1| exonuclease Kem1, putative [Aspergillus flavus NRRL3357]
gi|391870653|gb|EIT79830.1| 5'-3' exonuclease XRN1/KEM1/SEP1 involved in DNA strand exchange
and mRNA turnover [Aspergillus oryzae 3.042]
Length = 1409
Score = 419 bits (1076), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/469 (46%), Positives = 292/469 (62%), Gaps = 79/469 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S ++ E +IPEFDNLYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENRIPEFDNLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I + PKKLFFMAIDGVAPRAKMNQQR RRFR+A +AEV ++KA
Sbjct: 65 -------FNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTALDAEVAKEKAIS 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YF+ KI+ DK W+ V ++L
Sbjct: 118 QGIEMPKEDAFDSNCITPGTEFMAKLTEQLKYFINKKISEDK---------DWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR+ K++P Y+PN+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F + K ++ E F+LLHL ++R+YLELEF +L+ VLSF F +E +IDD++
Sbjct: 229 TFGRQVQKKPKEL---EHQNFYLLHLCMVREYLELEFQELERTDVLSFSFDMERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL L+KVY+E+LP + GYINE G +N++R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAFLFKVYKEILPKMGGYINEQGVINMERLGMLLDGL 345
Query: 419 ASFDFEQFREKYADIQYLEGKM--GKKFSDVFHKEKSKEMDPDLAALIK 465
+ +F F +Y+ ++++ K G+ S+ + KS + P L+K
Sbjct: 346 SDVEFRFFEAEYSGERWIQAKKNGGENNSESQERPKSFTITPAQKNLLK 394
Score = 335 bits (859), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 241/772 (31%), Positives = 386/772 (50%), Gaps = 47/772 (6%)
Query: 482 ANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNL 541
A +E D + + +F + K+ YY K ++ +E +R E Y++ +QW L
Sbjct: 484 AKVQELSAEDAQKAAEKKYEEKFQEWKSKYYTGKFEWGLDNHEEMRKLTENYVQGLQWVL 543
Query: 542 HYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLP 601
+YYY G SW W++ +HYAP ISD+K + +++G+PF P+ QL+ VLP SK+++P
Sbjct: 544 YYYYRGIASWPWFFQYHYAPMISDVKKGLKADTNFQLGQPFRPYDQLMGVLPDRSKKIVP 603
Query: 602 EPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTD 661
Y++LMT SPI+++YP +F D+NGKK +WEAVV IPFI+E +L+ A+ EHLLT
Sbjct: 604 AAYRDLMTSPESPIVDFYPRDFELDMNGKKMEWEAVVKIPFIEEKRLLDALKTKEHLLTP 663
Query: 662 EERSRNRHGPMLVYTYS-NVN-LGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----K 715
EE++RN G L +TYS +V + + P FP I H +E +I+ P +
Sbjct: 664 EEKARNGFGASLKFTYSPDVQFIYPSSLPGVFPDIPNCHCIE------NIFDLPTMDGLE 717
Query: 716 LRKGLCQDVNLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSL 774
GL L + FP+LK + ++ V VFQQ SRNES++I S
Sbjct: 718 PYIGLVDGAQLGASALAGFPSLKTLPHVGQLGFHGVCVFQQESRNESMVITVLDPGSRSS 777
Query: 775 KQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP--VFERAAKDMQ-DAFQL 831
+A Q LG+ +F+ YP L E V V D + K G V + Q + ++
Sbjct: 778 SLLAKQKLGQRVFVGYPFLQEAYV--VRVSDELFDYIKPEGEEHVVNIPHTEAQIEQWKK 835
Query: 832 SKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQ- 889
I Y +LG IG E +V+ Q + + G ++ I T YA Q
Sbjct: 836 KADKIEGTYSRRLGTIIGPVEAMVHVQLL--KGLLKTDEGATVKEFADIPGQETDYALQL 893
Query: 890 --SAVLNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFK 947
V+N + + I+E F G + F L + +YG + + + + + K
Sbjct: 894 VVGEVINPDERFIERDALPIEEEFPEGSRAFFLGDFNYGRPMHITGHSNGKVNGLIAAVK 953
Query: 948 VQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNI 1007
+EP+ + Y+PSY +A L ++PL+L++ T S F +D +R N+
Sbjct: 954 -GREPEFGKERARDAERFCPYMPSYAIARSLQLNPLVLAKIT-SAFSVDVE---GQRVNL 1008
Query: 1008 GLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYL 1067
GLN+KF + ++V+G++RR ++ W ++ + V L++ YM +FPE ++ + D Y
Sbjct: 1009 GLNLKFEARKQKVLGYSRRGDSG--WEFSPKAVELLQQYMIKFPEFIAGIQRNPQGDRYK 1066
Query: 1068 RDDVFPHQ-GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQ 1126
D +P + +V +I WLK E P A +D+ +V LIE D ++ Q
Sbjct: 1067 PTDFYPEETALLKVKEIREWLKSIEAKNFERVPLDAEQLDSDIVKLIEQDADQL--IQNQ 1124
Query: 1127 ITLFVKP------NKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI 1180
+ K + L P +L + F+L DRVV +D VP+ RGT++G+
Sbjct: 1125 PAMQAKKVGGVPRSALLRPSDVEQRLG---NQTFRLGDRVVYAQDSGKVPIATRGTVVGL 1181
Query: 1181 VQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLC 1230
+ TS + DVVFD F G + RCS RG + + +++N+SY + L
Sbjct: 1182 TR--TSRALLLDVVFDVSFMSGTTLGDRCSPFRGQTVLSSSVLNVSYRQLLA 1231
>gi|440632608|gb|ELR02527.1| 5'-3' exoribonuclease 1 [Geomyces destructans 20631-21]
Length = 1388
Score = 418 bits (1074), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/452 (46%), Positives = 283/452 (62%), Gaps = 78/452 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFDNLYLDMNGIIHNC+H + +D
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAENRIPEFDNLYLDMNGIIHNCTHKDSDDA--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + + F+AI
Sbjct: 52 ----------TFRMTEEQ--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F P KLFFMAIDGVAPRAKMNQQR RRFR+A + E +KA
Sbjct: 65 -------FNYIEHLFGKIKPHKLFFMAIDGVAPRAKMNQQRARRFRTALDVENAREKAIR 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G+ +P E+ FDSNCITPGT FM +L +QL+YF+ K++ D W+ V ++L
Sbjct: 118 EGKEMPKEEAFDSNCITPGTEFMAKLTEQLKYFINKKVSEDT---------DWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++PDY+ N+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRLSKAQPDYDHNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S ++ E F+L+HL ++R+YLE+EF +LKEPG++ F F +E +IDD++
Sbjct: 229 TFGRQSKAKSKEL---EHQNFYLMHLCIVREYLEIEFQELKEPGIMGFAFDLERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL L++K+Y+ VLP GY+NEGG +N+ R L +L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALALMFKIYKSVLPKAGGYLNEGGVINMPRLAILLEEL 345
Query: 419 ASFDFEQFREKYADIQYLEGKMGKKFSDVFHK 450
+ ++ F + +D ++ +GK K DV K
Sbjct: 346 SHVEYRFFESENSDAKWFKGKQMAKV-DVMEK 376
Score = 338 bits (866), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 237/754 (31%), Positives = 380/754 (50%), Gaps = 48/754 (6%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K YY K ++ + L AE Y++ +QW L+YYY G VSW WYY +HY+P
Sbjct: 503 KFQEWKDKYYDGKFEWKRDNETELTKLAENYVQGLQWVLYYYYQGVVSWPWYYAYHYSPM 562
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+ ++ +++G+PF P++QL+ VLP SK+++P Y LMT SPI+++YP +
Sbjct: 563 ISDVIKGLKADINFKLGQPFHPYEQLMGVLPDRSKKIVPTVYHELMTDPKSPIIDFYPRD 622
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR--------HGPMLV 674
F D+NGKK +WEAVV IPFIDE +L+ AM +L+D E++RN H P +
Sbjct: 623 FELDMNGKKMEWEAVVKIPFIDEKRLLSAMAPKNDMLSDAEKARNEFGVSLKFTHAPDMD 682
Query: 675 YTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNL-KLYVTHF 733
+TY + +G FP I H VE D + + GL DV L + + F
Sbjct: 683 FTYPSSLVGI------FPDIPHCHCVENIF--DLPTIEGLEYFVGLMGDVKLGEDALAGF 734
Query: 734 PTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHL 793
P+L + + + V VFQQ SRNES I+ + + + A LG+ + + YP L
Sbjct: 735 PSLATLPYNAALGFHGVNVFQQDSRNESSIVTLTDTEATTKVENAKARLGQKVHVGYPFL 794
Query: 794 IEIRVQAVATK--DSRISFDKNSGPVFE-RAAKDMQDAFQLSKKSITDGYYTKLGVDIGN 850
E +V V+ + + + D ++ V ++++D F+ + I + Y +LG+ IG
Sbjct: 795 QEAKVIRVSDELFNYTLPTDGSTHVVATPHGPREIED-FRRKAERIENVYSKRLGIIIGP 853
Query: 851 TEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESLEYKT--- 906
E L + + K G ++ +I T YA Q V + + K
Sbjct: 854 VESLTHVDMLRGMKK--TDAGATVKEYAYIAGVETDYASQVVVDEVASEDQRFIEKAALP 911
Query: 907 IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVY 966
I+E F G + F L +YG ++ E + I LS +EP++ V + +
Sbjct: 912 IEEEFPIGSRAFFLGEFNYGRPLEIVKH-NENKAEIWLSTVQGREPEVGREVVARSERTT 970
Query: 967 NYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRR 1026
Y+PSY VA +L + PL+LS+ T S + R N+GLN+KF K +V+G++RR
Sbjct: 971 PYMPSYAVAKRLQLHPLVLSKLTSSF----TVNVNGLRVNLGLNLKFEGKKLKVLGYSRR 1026
Query: 1027 DETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVF-PHQGEQRVAQIVS 1085
+T W ++++ V LI YM +FPE ++ + Y D + + + A+I +
Sbjct: 1027 GDTG--WEFSDKAVDLISQYMIRFPEFIAGIQRKPQGNEYEAADFYTADSAKAKFAEITA 1084
Query: 1086 WLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEK-----VEKQITLFVKPNKLYIPK 1140
WLK + P A +D+ V IE +VD + V K++ V N L P
Sbjct: 1085 WLKTIESKNFDKVPIDAQQLDSDTVKAIEASVDAMIQSNPGPVGKKLK-GVPRNALMRPA 1143
Query: 1141 PTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFP 1200
+L + KF L DR+V ++D VP+ RGT++GI + T+ + D+VFD F
Sbjct: 1144 DAEHRLG---NQKFGLGDRIVYVQDSGRVPIATRGTVVGISR--TARTTLVDIVFDHTFI 1198
Query: 1201 HGVKI--RCSESRGYRMPAQAMINLSYGERLCGN 1232
G + RC RG +P +++NLS+ + + G+
Sbjct: 1199 SGTTLDGRCDPFRGSTVPITSVLNLSHKQVIAGS 1232
>gi|406861681|gb|EKD14734.1| exonuclease II Exo2 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1395
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/456 (47%), Positives = 286/456 (62%), Gaps = 78/456 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + +D
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDTDDA--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+FRM + + F+AI
Sbjct: 52 ----------MFRMTEEQ--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE KA +
Sbjct: 65 -------FNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARRFRTALDAENARDKAIK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G+ +P E+ FDSN ITPGT FM +L QQL+YF+ K++ D W+ V V+L
Sbjct: 118 EGKEMPKEEAFDSNAITPGTAFMHKLTQQLKYFINKKVSEDT---------DWQGVEVVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++PDY+ N+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRLAKAQPDYDANIRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S ++ E F+L+HL ++R+YLELEF +LKEPGVLS F +E IIDD++
Sbjct: 229 TFGRQSKAKSKEL---EHQNFYLMHLCIVREYLELEFQELKEPGVLSASFDLERIIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL L++KVY+ VLP G+INEGG +N++R L +L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALALMFKVYKTVLPKAGGFINEGGVINMQRLAMLLEEL 345
Query: 419 ASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSK 454
+ ++ F + +D + + K K DV K K+K
Sbjct: 346 SHVEYRFFESENSDKSWFKAKQMAK-EDVMVKGKTK 380
Score = 330 bits (845), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 235/766 (30%), Positives = 381/766 (49%), Gaps = 45/766 (5%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCV 549
+D E + +F + K YY K ++ + L E Y++ +QW LHYYY G V
Sbjct: 489 ADAQAEMDRQYEVKFQEWKDTYYKGKFEWDRNNETELTKLCENYVQGLQWVLHYYYRGVV 548
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMT 609
SW WYY +HY+P ISD+ + ++ +++G+PF P++QL+ VLP SK ++P Y +LMT
Sbjct: 549 SWPWYYQYHYSPMISDVIKGLNADVNFKLGQPFHPYEQLMGVLPDRSKTIVPSVYHDLMT 608
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR- 668
NSPI+++YP +F D+NGKK +WEAVV IPFIDE +L+ AM LL+++E+ RN
Sbjct: 609 NPNSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLAAMAPKYLLLSEDEKFRNEF 668
Query: 669 -------HGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLC 721
H P + + Y + +G FP + H VE D + + GL
Sbjct: 669 GVTVKFTHDPHVDFIYPSSLVGV------FPDLPHCHCVENIF--DLPTIEGLEYHVGLM 720
Query: 722 QDVNLK-LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQ 780
+ V L + FP+L + + + V VFQQ SRNES+++ + + + A
Sbjct: 721 EGVKLGDAALAGFPSLATLPYNATLGFHGVNVFQQDSRNESMVVTIENTDERTNVKTAIT 780
Query: 781 ILGKTIFINYPHLIEIRVQAVATK--DSRISFDKNSGPVFERAAKDMQDAFQLSKKSITD 838
LG+ +F+ YP L E +V V+ + D S D +S + + + + FQ + I +
Sbjct: 781 KLGQRVFVGYPFLNEGKVVKVSDELFDYFPSEDGSSHAIQKPHSPHEINDFQKKAERIEN 840
Query: 839 GYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQA 898
Y +LG+ IG E + + VE K T + + + + S V+ + A
Sbjct: 841 NYSKRLGIIIGTVESITH---VEMLKGLRKTDDGATVKEYAVIPGMETDFASQVIVDEVA 897
Query: 899 RESLEYKT-----IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPD 953
E + I+E F G + F L +YG ++ ++ + I LS +E +
Sbjct: 898 SEDQRFIERAALPIEEEFPAGSRNFFLGEFNYGR-PLEVTGHRDGKADIWLSIIKGKEVE 956
Query: 954 LSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKF 1013
V +Y P+Y VA L+++ L+LS+ S + + G R N+GLN+KF
Sbjct: 957 FGKNVVNSQYAQTSYTPAYAVAKMLNLNGLVLSKVMSSFSV---SALGLPRLNLGLNLKF 1013
Query: 1014 SRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFP 1073
K +V+G++R+ E+ W Y+ + + L+ +YM +FPE F + ++ + Y D +P
Sbjct: 1014 EGKKLKVLGYSRKSESG--WEYSNKAIKLLTDYMTRFPEFFAGISRNARANEYEETDFYP 1071
Query: 1074 HQ-GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD----TCEKVEKQIT 1128
+ ++ +IV++LK E P A +D+ VV IE A D VE Q
Sbjct: 1072 KEIAGAKIKEIVAFLKSIESKNFEKVPLDAEQLDSDVVMAIEQACDYALANGPSVEFQKL 1131
Query: 1129 LFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYD 1188
V N L P +L + KF L DRVV I+D VP+ RG ++GI + T
Sbjct: 1132 KGVPRNALMKPSDAEHRLG---NQKFALGDRVVYIQDSGRVPIATRGVVVGISR--TPRT 1186
Query: 1189 AMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGN 1232
+ D++FD F G + RCS RG +P +++NL+ + + G+
Sbjct: 1187 TLLDILFDVTFMSGTTLGERCSPFRGSTVPVASVLNLTNKQVIAGS 1232
>gi|350537227|ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersicum]
gi|312063753|gb|ADQ27233.1| 5'-3' exoribonuclease 4 [Solanum lycopersicum]
Length = 978
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 261/725 (36%), Positives = 371/725 (51%), Gaps = 150/725 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY---QIP-----------EFDNLYLDMNGIIHNCSH 45
MGVP F+R++++RYP + ++V E +P EFDNLYLDMNGIIH C H
Sbjct: 1 MGVPAFYRWLADRYPLSIVDMVEEEPKDDVPVDISKPNPNGMEFDNLYLDMNGIIHPCFH 60
Query: 46 PNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 105
P T +F IF YI+ LF +++P+KL +MAIDGVAPRAKMNQQR RRFR++
Sbjct: 61 PEGKPA--PATYNDVFNSIFDYIDHLFSLVRPRKLLYMAIDGVAPRAKMNQQRTRRFRAS 118
Query: 106 KEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRS 165
K+A E +A+EK R + F+
Sbjct: 119 KDAA--ESEAEEKRLR----EEFEM----------------------------------- 137
Query: 166 AKEAEVLEQKAKEKGERLPTEK--RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWK 223
EA +L +PTEK DSN ITPGTPFM L L+Y++ ++ + W+
Sbjct: 138 --EAAIL----------VPTEKPETSDSNVITPGTPFMAVLSIALQYYIHSRLNKNAGWR 185
Query: 224 DTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLG 283
T VILS PGEGEHKIM YIR ++ P +NPN RHCLYGLDADLIML
Sbjct: 186 FTK---------VILSDANVPGEGEHKIMSYIRLQRNIPGFNPNTRHCLYGLDADLIMLS 236
Query: 284 LCTHEPYFSLLREEV-----------------------KFNTKSNKGGSQIV-TP-EETK 318
L THE +FS+LRE + N K G + TP + K
Sbjct: 237 LATHEVHFSILREVITPPGQQEKCFACGQVGHLAASCHGTNGNHGKDGKAVNDTPIHKKK 296
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
+ LH+ ++R+YL+ + P F E ++DD+V + F +GNDF+P++P L I
Sbjct: 297 YQFLHIWVLREYLQYDLEIYNPP----FQIDFERVVDDFVFLCFFVGNDFLPHMPTLEIR 352
Query: 379 NGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEG 438
GA+ LL +Y+ T+ GY+ + G + L R E F+ A ++ + F+++ Q +E
Sbjct: 353 EGAINLLMSIYRRDFTTMGGYLTDAGEVFLDRVEHFIQAAAVYEDQIFQKRARIQQSIEN 412
Query: 439 KMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRT 498
++ KE + + P +K L Y+E YYS++
Sbjct: 413 ------NERVRKEANAQPHPPAEDKVK-------------LGEPGYKERYYSEK------ 447
Query: 499 NFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHH 558
+ + A+ +EV +D + Y+ + W YYY G SW W+YP+H
Sbjct: 448 ---------------FGVSTAEDIHEVRQDVVQKYMEGLCWVCRYYYQGVCSWQWFYPYH 492
Query: 559 YAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEY 618
YAP+ SD+K + L + + GEPF PF QL+ VLPAAS + LPE Y+ LM +SPI ++
Sbjct: 493 YAPFASDLKGLADLEITFFPGEPFKPFDQLMGVLPAASAKALPEKYRMLMMDPSSPISDF 552
Query: 619 YPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS 678
YP +F D+NGK+ W+AVV +PFIDE KL+ +E LTD E+ RN L+Y +
Sbjct: 553 YPTDFELDMNGKRFAWQAVVKLPFIDEKKLLAETKKLEDTLTDTEQLRNSVMFDLLYVHH 612
Query: 679 NVNLG 683
+ L
Sbjct: 613 HHTLA 617
>gi|342182115|emb|CCC91594.1| putative exoribonuclease 1 [Trypanosoma congolense IL3000]
Length = 1296
Score = 415 bits (1066), Expect = e-112, Method: Compositional matrix adjust.
Identities = 377/1321 (28%), Positives = 594/1321 (44%), Gaps = 219/1321 (16%)
Query: 108 AEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 167
A+VL +K + + EK F I P+K FF+A+DGVAPRAKMNQQR RR+RS
Sbjct: 52 AKVLTEKEMIEAMFVYLEKLFHAIQ-----PRKCFFLAVDGVAPRAKMNQQRQRRYRSGY 106
Query: 168 EAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
E V ++A +G L E FDSNCITPGT FM + + L+YF+ +K+++D
Sbjct: 107 EMMVARERAAAEGMELLEENVFDSNCITPGTEFMVNVSEHLKYFIMMKVSSDP------- 159
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
W+ V+ SGH+ PGEGEHKI+DYIR K + DYNPN H LYGLDADLI+L L TH
Sbjct: 160 --AWQSCKVVYSGHDHPGEGEHKIVDYIRRRKMQEDYNPNETHSLYGLDADLILLALATH 217
Query: 288 EPYFSLLREEVKFN----------TKSNKGGSQIVT------PEETKFFLLHLSLMRDYL 331
EP+ LLRE V F + N + IV P+E F L H++++R+YL
Sbjct: 218 EPHLVLLREVVSFGPSQGSRADREQRENDEANGIVADKTYNKPDE--FVLFHVNILRNYL 275
Query: 332 ELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQE 391
+LE + G L + +E++IDD+V M IGNDF+P++P L I +G++ + ++Y
Sbjct: 276 DLEV-RYVLGGKLPAGYDLEHVIDDFVFMCIFIGNDFLPSIPTLGIRDGSVVKMVEIYAT 334
Query: 392 VLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKE 451
+ + E G +N + +L +LA + + + + + +M +
Sbjct: 335 KIVKNGRRLTEDGSINWDAVDTWLQELAKDELPTIKSRALQERAYQSRMARM-------- 386
Query: 452 KSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDY 511
P+++ TE V Y+E YY + + F + +
Sbjct: 387 NGGYEAPNIS-------------TETVETLVEYKEKYYRE-----KHGFGDGWNPQGENM 428
Query: 512 YHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSH 571
KL Y + I W L YYY G SW W+YPHHYAP SD+ D +
Sbjct: 429 AKLKLHY---------------VEGIAWVLEYYYQGPPSWKWFYPHHYAPMASDLVDLAA 473
Query: 572 L--NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNG 629
+ ++++ GEPFLP QQLLAVLP S L+P Y L+ + SP+ +Y+PE+ D G
Sbjct: 474 VASRVRFDPGEPFLPHQQLLAVLPPMSYRLVPRAYWPLLRSKGSPLAKYFPEKLQIDREG 533
Query: 630 KKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPD 689
+ +WE VVLIPFIDE L+ A ++V+ +T E+R N GP +++TY +
Sbjct: 534 ARAEWEGVVLIPFIDERVLLAAYESVQSKVTPEDRKNNSPGPPILFTYDATAQPFDVPNK 593
Query: 690 YFPAINENHAVEKPLYRDDIYVHPNKLR--KGLCQDVN-----LKLYVTHFPTLKHVQFT 742
FP + P + P K++ LC+ V+ L+ + T + L FT
Sbjct: 594 LFPRLKNVMVHRCP------FEFPPKVKFIPKLCEGVHDGQRQLEGFTTLWSKLGF--FT 645
Query: 743 HKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAV 801
+ + V +F +PSR+ES+++ ++D A ++G+ + + +PH RV +V
Sbjct: 646 PQRALSAVAIFGRPSRDESLLLELKDSFNCAGAMDGA-TLVGQEVLVGFPHYRRARVVSV 704
Query: 802 ATKDSRISFDKNSGPVFERAAK---DMQDAFQLSKKSITDGYYT--KLGVDIGNTEVLVY 856
+ R+ S F +K + D+ + + Y KLGV + N VLVY
Sbjct: 705 CDQSVRVYAKLTSDGAFCGTSKYFMNGDDSARFKRDCDIHMRYMREKLGVSVVNLRVLVY 764
Query: 857 GQPVESRKYFFG----PRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKTIDE--- 909
F G P G+V R F YA + LQ A +Y+ I+
Sbjct: 765 ------VNIFVGMRVTPEGRVV--RNFSTKEKCYAL-PLIARLQDADIVDDYRYIERDRL 815
Query: 910 ---------IFYPGCQCFALSNPH---YGSGGCVISTVKEENSFIKLSFKVQQEPDLSDL 957
I Y G + + YGS G VI T E + + + +L+
Sbjct: 816 DEDNVLGTRIIYVGPEPKSKKGAVLQVYGSPGTVIGTNPEGGDEFTVVLRAYVD-NLAVP 874
Query: 958 VHLQD-DTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRK 1016
L+D + N++ ++ ++ KL SPL L + GS+ + + E G++ IGL I ++R
Sbjct: 875 QSLRDYASRKNWMSAFELSDKLGASPLALCQLAGSLRV--AREHGSR--EIGLGIIYTRN 930
Query: 1017 NEEVVG----------------------------FTRRDETTKK---------------- 1032
N +G F R TT+
Sbjct: 931 NLVRIGYAKVTRLVANAWKSRGGPNRRLTDANYNFGRSVATTEPLGHYTDRASDDSDGRP 990
Query: 1033 --------WFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQR----- 1079
WF +E V LIK Y+++F + L + D + + F +
Sbjct: 991 IRMAQSTIWFSSE-AVGLIKQYVQKFRPLVDLLGVGAVDPQSVEPERFMTGSWEGGDISD 1049
Query: 1080 -VAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDT-CEKVEKQITLFVKPNK-L 1136
+ +I +++ + + G V L+E ++ + K++ P + L
Sbjct: 1050 VINEISTFVGSLGISDVPLVSGGDDAFPQSYVELLERELEKHSPRARKEVVRRPVPRRYL 1109
Query: 1137 YIP--KPTLDKLCPDP---DTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMY 1191
Y P + T + P + L RVVN R C VP G GT++ +V T DA
Sbjct: 1110 YFPTVRHTGGYIVQLPFPRNQVIHLGSRVVNCRACGAVPFGATGTVVRLVSSGT--DA-- 1165
Query: 1192 DVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPHVKNINVMQSRGER 1249
+VV+D+PF GV R RG ++ L S + + +G+
Sbjct: 1166 EVVYDEPFLGGVHFDGRLKTPRGALSKTSTLLVLG--------SGDGSGDQGTLMKQGQT 1217
Query: 1250 NTNYAQVTRQPQRTTFYKENAPLVNSNLQVTSPYHVKVSRCNSQQSSVSQSPSSTMISQQ 1309
++N + T +P RT E P + ++VT V V+R + S+ + + ++ + Q+
Sbjct: 1218 SSNMKKFTPKPNRTE-RVEAGP--SGGVRVT----VGVARGAERVSASTHANTTCLAPQK 1270
Query: 1310 S 1310
Sbjct: 1271 G 1271
Score = 152 bits (384), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 94/130 (72%), Gaps = 2/130 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEKQ 59
MGVPKFFR+I+ERYP + R++ P DNLYLD+NGIIHNCSHPND + ++ TEK+
Sbjct: 1 MGVPKFFRWIAERYPMVITPFRDFP-PPVDNLYLDVNGIIHNCSHPNDANSSAKVLTEKE 59
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ + +F Y+E LF IQP+K FF+A+DGVAPRAKMNQQR RR+RS E V ++A +G
Sbjct: 60 MIEAMFVYLEKLFHAIQPRKCFFLAVDGVAPRAKMNQQRQRRYRSGYEMMVARERAAAEG 119
Query: 120 ERLPTEKRFD 129
L E FD
Sbjct: 120 MELLEENVFD 129
>gi|297737374|emb|CBI26575.3| unnamed protein product [Vitis vinifera]
Length = 845
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 252/716 (35%), Positives = 361/716 (50%), Gaps = 125/716 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+P F+R++++RYP E + FDNLYLDMNGIIH C HP + P + T +
Sbjct: 1 MGIPAFYRWLADRYPLAVVNAVEDRPAVFDNLYLDMNGIIHPCFHP-EGLPAPK-TYTDV 58
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F+ +F YI+ +F +++P+KL +MAIDGVAPRAKMNQQR RRFR+AKEA +
Sbjct: 59 FKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRFRAAKEAA---------DD 109
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
TE+ LK F ++ +A+
Sbjct: 110 ASGTER------LKTVFESEMEMLAL---------------------------------- 129
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
L K+ DSN ITPGT FM L L+Y++ L++ D W+ + VILS
Sbjct: 130 --LDQTKKLDSNVITPGTEFMALLSSALKYYIHLRMNLDP---------GWRGIKVILSD 178
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLIML L THE +FS+LRE+V
Sbjct: 179 ANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATHEIHFSILREDVHK 238
Query: 301 NTKSNK----------------------GGSQIVT-PEETKFFLLHLSLMRDYLELEFGK 337
+ +K GG I KF L++ +RDYL +
Sbjct: 239 AYRKDKNNKPRKDSLLVNKRGKSKQGEVGGEDIEDFISRQKFQFLNIWTLRDYLAHDMSI 298
Query: 338 LKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLD 397
S +E +IDD+V M +GNDF+P++P L I GA+ LL VY++ +
Sbjct: 299 PDR----SLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEISEGAIDLLMTVYKKEFVQIG 354
Query: 398 GYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKE------ 451
GY+ + L+R E+F+ + S + FR++ ++ K G +F +K+
Sbjct: 355 GYLTNSSEVYLERVERFMQVVGSHENAIFRKR----SQVQKKRGVRFQGSSNKKTVSDYS 410
Query: 452 -------------KSKEMDPDLAALIK----ATDDDYDDGTEEVLNYANYEEYYYSDEDE 494
++P + +T + T + AN ++
Sbjct: 411 TTPCVEPQGMTGSSGSSLEPRKTPFCQDSKNSTVKEIQCSTNCISTGANSLVDKIKLGED 470
Query: 495 EWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWY 554
W+ F+ E + KT+ V R YI I W +HYYY G SW W+
Sbjct: 471 GWKERFYVEKFEAKTE---------DDRERVRRHAVLKYIEGICWVMHYYYQGVCSWQWF 521
Query: 555 YPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSP 614
YP+HYAP+ SDI L++++ +G+PF PF QL+ VLPAAS LP Y+ LM E SP
Sbjct: 522 YPYHYAPFASDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAASAHALPLYYRKLMMDETSP 581
Query: 615 ILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
IL++YP +F D+NGK+ W+A+ +PFI E +L+ + VE LTD+E+ RNR G
Sbjct: 582 ILDFYPADFELDMNGKRYPWQAICKLPFIKESRLLAEIAKVESTLTDKEKLRNRLG 637
>gi|349604424|gb|AEP99978.1| 5'-3' exoribonuclease 1-like protein, partial [Equus caballus]
Length = 514
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/502 (46%), Positives = 320/502 (63%), Gaps = 33/502 (6%)
Query: 332 ELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQE 391
+ EF LK+ ++F + IE IIDDW+LMGFL+GNDFIP+LP LHI + ALPLLY Y
Sbjct: 1 DYEFSVLKDK--IAFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGTY-- 56
Query: 392 VLPT---LDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVF 448
+LP+ L GYINE G+LNL RFEK+L KL+ FD E F E + D+++ E K+G K+ +
Sbjct: 57 ILPSCQNLGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFESKVGNKYLNEA 116
Query: 449 ----------HKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRT 498
+KEK K D + + A D + G E V + N E+ ED++
Sbjct: 117 AGVAAEEAKSYKEKRKSKDQENSICWAALDTN---GEEVVASKDNVED---ETEDDD--- 167
Query: 499 NFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHH 558
F +EF Q+K YY K+ V+++ L DQA CY++AIQW LHYYY+G SWSWYYP+H
Sbjct: 168 LFETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYH 227
Query: 559 YAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEY 618
YAP++SDI++ S L++ +E+G+PF PF+QLLAVLPAASK LLP YQ+LMT E+SPI+EY
Sbjct: 228 YAPFLSDIRNISALSIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEY 287
Query: 619 YPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS 678
YP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L EER RNRH L+ Y
Sbjct: 288 YPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNRHSECLMCWYD 347
Query: 679 NVNLGT--ALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTL 736
T + P+ FPAI K + D V NK + + + LY FPTL
Sbjct: 348 RDTEFTYPSPWPEKFPAIERCCTRYKMISLDAWRVDINKNK--ITRIDQKALYFCGFPTL 405
Query: 737 KHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQVADQILGKTIFINYPHL 793
+H++ ++ + V+VFQQ SR E++ I+V + S++ VA +LGK++F+N+PHL
Sbjct: 406 RHIKHKFFLKKSGVQVFQQSSRGENMMLEILVNAESDDLSIENVASSVLGKSVFVNWPHL 465
Query: 794 IEIRVQAVATKDSRISFDKNSG 815
E RV V+ D++ ++ G
Sbjct: 466 EEARVVGVSDGDTKFYLEEPPG 487
>gi|340054861|emb|CCC49169.1| putative 5'-3' exonuclease XRNA [Trypanosoma vivax Y486]
Length = 1411
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 359/1221 (29%), Positives = 564/1221 (46%), Gaps = 220/1221 (18%)
Query: 125 EKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLP 184
EK F+ I P+K FF+A+DGVAPRAKMNQQR RR+RS E + ++A +GE +P
Sbjct: 69 EKLFNAIQ-----PRKCFFLAVDGVAPRAKMNQQRQRRYRSGYELMIAREEALARGEEIP 123
Query: 185 TEKR-FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHET 243
E FDSNCITPGT FM R+ + +YF+ +K++TD W+ +I SGH+
Sbjct: 124 EEHDVFDSNCITPGTDFMVRISEHFQYFITMKVSTDP---------AWQKCNIIYSGHDH 174
Query: 244 PGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNT- 302
PGEGEHKI+D+IR K +P Y+PN HC+YGLDADL+ML L THEP F LLRE V F +
Sbjct: 175 PGEGEHKIVDFIRRNKMQPGYSPNESHCMYGLDADLVMLALATHEPNFVLLREVVSFGSS 234
Query: 303 ---------KSNKGGSQIV-----TPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPF 348
+++K +V P+E F L HL+L+RDYL+L+ G L +
Sbjct: 235 ESRRLREQKEADKANGFVVDKSYHVPDE--FVLFHLNLLRDYLDLDLRDKVGAG-LPVSY 291
Query: 349 SIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNL 408
E ++DD+VLM F +GNDF+P++P L I +G+L + +Y + + Y+ E G +N
Sbjct: 292 DFERVVDDFVLMCFFVGNDFLPSIPTLSINDGSLVHMLDIYASRVLKANMYLTEEGRINW 351
Query: 409 KRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATD 468
+ E ++ LA +F + + A K KE LA D
Sbjct: 352 RTVELWIQGLAELEFSTIKAREA--------------------KEKEYQRQLA----RRD 387
Query: 469 DDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRD 528
Y+ N+ + EY + F+ E +H D + + + D
Sbjct: 388 PSYEAPAVLTKNFESLNEY---------KDQFYRE--KHGFD------NGWDPQGKEIAD 430
Query: 529 QAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHL--NLKYEMGEPFLPFQ 586
Y+ + W YYY+G SW W++PHHYAP +SD+ + + + +E+GEPFLP Q
Sbjct: 431 LRLHYVEGLVWVYGYYYHGPPSWKWFFPHHYAPMVSDLVNLPAVANRVSFEVGEPFLPHQ 490
Query: 587 QLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEV 646
QLLAVLP S LLP Y L+ + SP+ Y+PE+ D G + WE +VLIPFIDE
Sbjct: 491 QLLAVLPPMSYRLLPRAYWPLLRSKGSPLARYFPEQLKIDREGARASWEGIVLIPFIDER 550
Query: 647 KLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYR 706
L+ A +V+ +T E+R+ NR G ++TY + P P ++ + R
Sbjct: 551 TLLAAFSSVQDRVTPEDRANNRLGKPTLFTYD-----ATMEPYELPNAVLG-TLKNAMAR 604
Query: 707 DDIYVHPNKLR--KGLCQDVNL-KLYVTHFPTLKHV--QFTHKIENAKVKVFQQPSRNES 761
Y P +R LC V+L + + F +L+ + + E+ V +F P+R ES
Sbjct: 605 RQTYEFPPHVRFVPRLCPGVDLANIQLEGFSSLRFRWDRISPVRESGAVTIFGMPTRGES 664
Query: 762 -IIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVF-- 818
++++ D + S + VA+ ++G+ +F+ +PHL RV++V+ K +IS ++ F
Sbjct: 665 LLLLLNDSQEYRSARNVAN-LVGQEVFVGFPHLRRARVESVSDKSVKISACWSNMGTFCG 723
Query: 819 ---ERAAKDMQDAFQLSKKSITDGYYT-KLGVDIGNTEVLVYGQPVESRKYFFGPRGKVT 874
++ +++M F + K I Y K+G+ + VLV + F G +VT
Sbjct: 724 TKEKKLSREMSIDF-VRKCDIHQQYMKQKIGILVKELHVLV------TVNLFNG--MQVT 774
Query: 875 QQRTFIRSTVTYAYQSAV--------LNLQQARESLEYKTIDE-------IFY---PGCQ 916
Q+ +R A+ +NL Q +E D IF P +
Sbjct: 775 QKGRIVRGFSKNETCCAIPLVVKLQDVNLLQDPRYVERDQKDNTGPATKVIFVCPKPKSK 834
Query: 917 CFALSNPHYGSGGCVISTVKEENSFIKLSFKV-QQEPDLSDLVH---LQDDTVYNYLPSY 972
A+S YGS G V+ + +++ ++ +V Q + + +H L++ N+L
Sbjct: 835 V-AVSKQLYGSAGVVMGSGPKQDGTFSVAVRVCQGQFKVPQSLHSYVLRE----NWLTLT 889
Query: 973 TVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGF--------- 1023
+ L +S L++ G ++ T +GL++ +R + VG+
Sbjct: 890 EASRVLCVSSLVVRNIIGVLY----TAPAFGSRQLGLSLVHTRAHLARVGYVKLVPREVN 945
Query: 1024 ----TRRDETTKKWF-------------------------------YTEQVVTLIKNYMK 1048
TR E F YT + T+ +K
Sbjct: 946 AWGSTRNSELNNGMFTANPEASGPIGHYLDNAHRNDLNDLSDGRTQYTTWLSTMAIKLVK 1005
Query: 1049 QFPEVFGFLKDHSSDDIYLRDDVFPHQ--------GEQRVAQIVSWLKEQPHAKAEVRPC 1100
++ E F L DH ++ PH G+ +I S L E ++ + C
Sbjct: 1006 EYIERFRPLVDHLDS-----CNILPHALEPPYFMTGQWSGCEIDSVLSE---VESFIDSC 1057
Query: 1101 G---AAVVDAKVVSLI-EHAVDTCEKVEKQITLFVKP--------NKLYIPKPTLD---- 1144
G + ++A S +H + E++++Q K LY P +
Sbjct: 1058 GIRNVSFINASESSYTSQHLKELEEELDRQCPFPFKEFLLSSVLWRHLYFPIVSCTGGYI 1117
Query: 1145 KLCPDPDTKF-KLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGV 1203
P +F +L RVVN C VP G GT++ I+ E +VV+D+PF G
Sbjct: 1118 TQLPFARKQFVRLGSRVVNCSACGAVPFGATGTVVRILSSED----YAEVVYDEPFHGG- 1172
Query: 1204 KIRCSESRGYRMPAQAMINLS 1224
C + R R P A+ L+
Sbjct: 1173 --SCFDGR-LRQPRGALSKLT 1190
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/126 (57%), Positives = 93/126 (73%), Gaps = 2/126 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDP-HFRITEKQ 59
MGVPKFFR+++ERYP + R++ P+ DNLYLDMNGIIHNCSHPND D H TE +
Sbjct: 1 MGVPKFFRWVAERYPSVIIPFRDFP-PQIDNLYLDMNGIIHNCSHPNDVDAKHKAPTELE 59
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ + +F Y+E LF IQP+K FF+A+DGVAPRAKMNQQR RR+RS E + ++A +G
Sbjct: 60 MAKSMFVYLEKLFNAIQPRKCFFLAVDGVAPRAKMNQQRQRRYRSGYELMIAREEALARG 119
Query: 120 ERLPTE 125
E +P E
Sbjct: 120 EEIPEE 125
>gi|449269264|gb|EMC80058.1| 5'-3' exoribonuclease 2, partial [Columba livia]
Length = 914
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 252/726 (34%), Positives = 354/726 (48%), Gaps = 163/726 (22%)
Query: 28 EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDG 87
EFDNLYLDMNGIIH C+HP D P + E ++ IF YI+ +F +++P++L +MAIDG
Sbjct: 23 EFDNLYLDMNGIIHPCTHPEDK-PAPK-NEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDG 80
Query: 88 VAPRAKMNQQRGRRFRSAKEA-EVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAI 146
VAPRAKMNQQR RRFR++KE E E+K K + E ++
Sbjct: 81 VAPRAKMNQQRSRRFRASKEGMEAAEEKQKIRQE----------------------ILSK 118
Query: 147 DGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQ 206
G+ P ++ KE+ FDSNCITPGT FM L +
Sbjct: 119 GGILP---------------------PEEVKER---------FDSNCITPGTEFMDNLAK 148
Query: 207 QLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNP 266
LRY++ ++ +D WK++ VILS PGEGEHKIMDYIR +++P+++P
Sbjct: 149 CLRYYIADRLNSDP---------GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDP 199
Query: 267 NMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTK-----SNKGGSQI---------- 311
N HCL G DADLIMLGL THEP F+++REE K N N+ G ++
Sbjct: 200 NTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNKPKPCALCNQMGHEVKDCQGLPREK 259
Query: 312 ----------VTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMG 361
+ E +F + L ++R+YLE E L F F E +DDWV M
Sbjct: 260 QGKHDQFADSLPVAEQEFIFIRLCVLREYLERELTM----ASLPFTFDFERSVDDWVFMC 315
Query: 362 FLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASF 421
F +GNDF+P+LP L I GA+ L +Y+ V+ GY+ E G++NL+R + + +
Sbjct: 316 FFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEV 375
Query: 422 DFEQFREKYAD-------------------------IQYLEGKMGKK------------- 443
+ F+++ D Q+ +G +
Sbjct: 376 EDSIFKKRKDDDDNFKRRQKEKRKRMKRDQPAFIPGGQFSPQALGNRSSPQAISNPRQAA 435
Query: 444 FSDVFHKEK------------SKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSD 491
F H + + E P LA IK +D D E D
Sbjct: 436 FEMRMHDRQNATPSSSPNTSLTSEGSPSLAGGIKRKAEDSDSEPEP------------ED 483
Query: 492 EDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSW 551
W T + K YY K D + R + Y+ + W L YYY GC SW
Sbjct: 484 NIRLWETGW-------KQRYYKNKFDVDASDEKFRRKVVQSYVEGLCWVLRYYYQGCASW 536
Query: 552 SWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
+WYYP HYAP+ SD + + + +E G +PF P +QL+ V PAAS LP ++ LMT
Sbjct: 537 NWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPTWRKLMTD 596
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
S I+++YPE+FA DLNGKK W+ V L+PF+DE +L A++ V LT EE RN G
Sbjct: 597 PESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEESRRNSLG 656
Query: 671 PMLVYT 676
+++
Sbjct: 657 GDVLFV 662
>gi|116199173|ref|XP_001225398.1| hypothetical protein CHGG_07742 [Chaetomium globosum CBS 148.51]
gi|88179021|gb|EAQ86489.1| hypothetical protein CHGG_07742 [Chaetomium globosum CBS 148.51]
Length = 1420
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/441 (47%), Positives = 279/441 (63%), Gaps = 77/441 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H D+D
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTH-KDSD---------- 49
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ FR+ + + F+AI
Sbjct: 50 --------DVQFRLSEEE--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PKKLFFMAIDGVAPRAKMNQQR RRFR+A EAE KA +
Sbjct: 65 -------FNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTALEAEKARDKAIK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G+ LP E+ FDSNCITPGT FM +L QQL+YF+ K++ D+ W+ ++L
Sbjct: 118 EGKELPKEEPFDSNCITPGTEFMAKLTQQLKYFINKKVSEDRDWQQP---------EIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR +++P+YNPN+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRNARAQPEYNPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F ++ ++ E F+L+HL ++R+YLELEF LK+ G +SFPF +E +IDD++
Sbjct: 229 TFGRQAKHKSKEL---EHQNFYLMHLCIVREYLELEFQDLKKEGAMSFPFDMEKVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP LHI GAL ++++Y+ VLP DGYINE G +NL+R + L +L
Sbjct: 286 LMAFFVGNDFLPNLPHLHINEGALATMFRIYKSVLPKCDGYINENGKVNLQRLSRLLDEL 345
Query: 419 ASFDFEQFREKYADIQYLEGK 439
++ F + D +L GK
Sbjct: 346 GKEEYRFFEHENEDESWLRGK 366
Score = 336 bits (862), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 257/796 (32%), Positives = 396/796 (49%), Gaps = 66/796 (8%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTN--EVLRDQAECYIRAIQWNLHYYYNG 547
+D + +F + K +YY K + N E LR E Y++ +QW L+YYY G
Sbjct: 487 ADAQAAMEAKYKEKFQEWKDEYYDQKFEDWTPDNREEELRKLTENYVQGLQWVLYYYYRG 546
Query: 548 CVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNL 607
SW W+Y +HY+P ISD+ + +L +++G+PF P +QL+ VLP SK+++P+ Y L
Sbjct: 547 IASWPWFYAYHYSPMISDVVKGLNADLNFKLGQPFRPNEQLMGVLPDRSKKIVPKVYWEL 606
Query: 608 MTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
MT SPI+++YP +F D+NGKK DWEAV+ IPFI+E +L+ AM + LL+D E++RN
Sbjct: 607 MTDPKSPIIDFYPRDFELDMNGKKMDWEAVIKIPFIEEKRLLSAMAPKDALLSDAEKARN 666
Query: 668 RHGPMLVYTYS---NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDV 724
G L +TYS + ++L D FP I H VE D V + R GL
Sbjct: 667 DFGVALKFTYSGDIDFVYPSSLV-DVFPPITHCHCVENIF--DLPAVEGLEYRAGLTDGA 723
Query: 725 NLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILG 783
L + + FP+L + + + V VFQQ SRNES+I+ + ++ + + A LG
Sbjct: 724 LLNIEALAGFPSLATLPYVASLGFHGVNVFQQESRNESMIVNLLETEMRTNVESAKVKLG 783
Query: 784 KTIFINYPHLIEIRVQAVATK--DSRISFDKNSGPVFER--AAKDMQDAFQLSKKS--IT 837
+ F+ YP L E ++ V+ + D ++ D SG V R ++++D SKK+ I
Sbjct: 784 QRCFVGYPFLQEAKIIKVSDELFDYTLAED-GSGQVVPRNHTPREIED---WSKKADRIE 839
Query: 838 DGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQ 896
+ Y +LG+ IG E LV + + G ++ I T YA Q V +
Sbjct: 840 NFYSKRLGIQIGPVESLVSVHML--KGLVKTDEGATVKEYGEIPGMETEYASQIIVDEVV 897
Query: 897 QARESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPD 953
E K ++E F F L + +YG V+ + S I L+ ++EPD
Sbjct: 898 NEDERFIEKAALPVEEEFPLKSVGFFLGDYNYGQPLEVVGYTAGKVS-IWLAVLEKREPD 956
Query: 954 LSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKF 1013
+ + +Y+PSY VA +L + PL LS+ T S FI G R N+GLN+KF
Sbjct: 957 FAKRIIHDAQKGMHYMPSYMVAKQLDLHPLTLSKITSSYFI---RTVGDLRVNLGLNLKF 1013
Query: 1014 SRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVF- 1072
+ ++V+G++R+ +T W ++ V LI YM +FP+ F +K + S D++
Sbjct: 1014 EARKQKVLGYSRKSQTG--WEFSPAAVHLILEYMTKFPDFFAGVKRNPSGAELTESDLWT 1071
Query: 1073 -PHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD-----TCEKVEKQ 1126
P G RV +I SWLK + E P A +D+ VV + D T K+
Sbjct: 1072 DPAVGSPRVKEIGSWLKTLKTSSMERVPLDAEQLDSDVVMRLASEADNLQLSTVPSNPKK 1131
Query: 1127 ITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETS 1186
+ V N L P+ +L + +F L DRVV + VP+ YRGT++GI + T+
Sbjct: 1132 MN-GVPRNALMRPEDAEHRLG---NQQFALGDRVVYVASTGKVPIAYRGTVVGISRTPTA 1187
Query: 1187 YDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPHVKNINVMQ 1244
+ DVVFD F G + RC RG +P+ ++NL+ + + G+
Sbjct: 1188 --KLLDVVFDVTFMSGTTLGDRCPPFRGQTVPSTVLLNLTNHQVVAGSK----------- 1234
Query: 1245 SRGERNTNYAQVTRQP 1260
AQV RQP
Sbjct: 1235 ---------AQVARQP 1241
>gi|301094845|ref|XP_002896526.1| 5'-3' exoribonuclease 1, putative [Phytophthora infestans T30-4]
gi|262109022|gb|EEY67074.1| 5'-3' exoribonuclease 1, putative [Phytophthora infestans T30-4]
Length = 1480
Score = 412 bits (1058), Expect = e-111, Method: Compositional matrix adjust.
Identities = 358/1221 (29%), Positives = 549/1221 (44%), Gaps = 197/1221 (16%)
Query: 128 FDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEK 187
D + PKKL ++AIDGVAPRAK+NQQR RRFR+ + + K + +L EK
Sbjct: 70 LDRLITHIIKPKKLVYIAIDGVAPRAKLNQQRSRRFRAGLDRQQAMDKERHMQIKLQDEK 129
Query: 188 ----------RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVI 237
+FDSNCITPGT F+ +L Q L YFV+ K+ +D LW + V
Sbjct: 130 DGHKAKSVASKFDSNCITPGTEFLSKLSQHLVYFVRQKMKSDPLWAR---------LEVF 180
Query: 238 LSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE 297
SG E PGEGEHKI+++IR+ K DY N+RHC+YG DADL++LGL THEP+F+L+RE
Sbjct: 181 FSGSEVPGEGEHKIVEFIRHRKMTDDYEANLRHCMYGSDADLMLLGLMTHEPHFTLVRET 240
Query: 298 VKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDW 357
V + + K ++ + EE ++ L+HLSL R+YL +E + P E ++DD+
Sbjct: 241 VVWGSHHKKVAAKQI--EEQQWQLVHLSLFREYLMMEMR-------VQSPLDGERMLDDF 291
Query: 358 VLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDG-YINEGGYL-NLKRFEKFL 415
+L+ FL+GNDFIP+ P L I A+PLL KVY+E+L T G Y+ G + N+K ++
Sbjct: 292 ILLTFLLGNDFIPHSPTLEISEDAIPLLLKVYRELLETHQGSYLTLNGKITNVKLLQELF 351
Query: 416 TKLASFDFE----QFREKYADIQYLEGKMGKKFSDVFHKEKSKEM--------------- 456
+ + + E + E+ G+ K DV E K +
Sbjct: 352 HVIGNQEEEILINRAMEEQRRSGRRGGRQQSKQHDVDATEVQKAIMALRDDDDDAPPPLL 411
Query: 457 DPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSE-FGQHKTDYYHYK 515
D + + + DG EE E D E SE F + K +YY K
Sbjct: 412 DDEDEEEAERALLEALDGPEETKMSLELER-----SDREVLMLAGSESFQETKWNYYARK 466
Query: 516 LDYAK----VTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSH 571
+ N+ L + Y+ A+ W L YY+ G SW+WYYP+HYAP +SD+ D
Sbjct: 467 YGIQRGNGDAGNKDLEQVKKAYMEALVWCLAYYFQGPQSWAWYYPYHYAPMVSDLTDIEE 526
Query: 572 L--NLKYE----MGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFAT 625
+ N+K++ + P LPF+QL++ LPA+S L+PE Y+ LM SPI +YPE FA
Sbjct: 527 MIGNVKFDEDPSIAGPLLPFEQLMSNLPASSSNLVPESYRFLMVSPVSPIKHFYPETFAI 586
Query: 626 DLNGKKQDWEAVVLIPFIDEVKLIKAMDAV--EHLLTDEERSRNRHGPMLVYTYSNVNLG 683
D+ GK+ WE V L+PFID L +A+ + LT+ ER RN+ + + ++ +
Sbjct: 587 DMEGKRNAWEGVNLLPFIDVALLKQAIAQFCPDSQLTEAERRRNKLQRLPIRIVRDLTVL 646
Query: 684 TALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQDVNLKLYVTHFPTLKHV 739
L P + V R + Y P+ + + L V L L FP+L V
Sbjct: 647 DTLK-STLPGVVGFPDVLYCNTRVEEYGLPSIPGGEFKSKLMDGVVLPL--AGFPSLYTV 703
Query: 740 QF-THKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVAD------------QILGKTI 786
+ +I + + F SR S+I+ Q+P+ ++ D ++LG T+
Sbjct: 704 TLESTRIASVGLNCFGMSSRKSSLIL-----QLPASGKLNDNDNATADEINPRELLGTTV 758
Query: 787 FINYPHLIEIRVQAVAT-------KDSRISFDKN----SGPVFERAAKDMQDAF------ 829
N+P+L E+ V ++T K S + N S VF D + A+
Sbjct: 759 LANWPNLHEVLVVGISTLSGEYRLKQSSRKHNNNRRTQSEAVFTPYGADEKSAWAYYAQT 818
Query: 830 QLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQ 889
++ K G G+D+G T + + + P +++ F + Q
Sbjct: 819 EVVKLLSGRGIPGSGGIDLGRTGITSVLHVLPLQGMVSNPLTGAIEKK-FGETEALVPAQ 877
Query: 890 SAVLN--LQQAR-ESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSF 946
V + L AR E E ++E F + G V S +E+++
Sbjct: 878 LTVRDRKLLDARFEETETLPLNERFPVDSKALITRGQWLGCTAIVRSQDEEQHTVTVHLN 937
Query: 947 KVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHN 1006
+ QEP ++ +Q T Y P Y VA KL IS L TGS+ I GA +
Sbjct: 938 TIDQEPPFGYVI-VQKIT-DRYFPGYLVAQKLGISASTLGLITGSVII---KPLGA---D 989
Query: 1007 IGLNIKFSRKNEEVVGFTR----------------------------------------- 1025
IGLNI++ RK + G+ R
Sbjct: 990 IGLNIRY-RKELLLPGYCRLVNRDNSNVNPSDDSNVWRKGDIVKIVGSSGSNGSGDAPSG 1048
Query: 1026 ----RDETTKKWFYTEQVVTLIKNYMKQFPEV------FGFLKDHSSDDIYLRDDVFPHQ 1075
R+ + W YTE+ V LI N+ K+FPEV F + D++ DDV +
Sbjct: 1049 SSPTRNGSNTAWEYTERAVQLIANFQKEFPEVIRNLSRLPFATTYQGKDVFGIDDV--GR 1106
Query: 1076 GEQRVAQIVSWLKEQPHAKAEVR---PCGAAVVDAKVVSLIE-----HAVDTCEKVEKQ- 1126
E + + W+++Q +E P + + V +E A + + E+Q
Sbjct: 1107 VEVKAEAVKQWIEQQHLGASEHSKHIPITSEYIALNAVRAMEAAGTLRAKERAKAAEEQR 1166
Query: 1127 ---ITLFVKPNKLYIPKPTLDKLCPDPDTKFK---------LFDRVVNIRDCYTVPLGYR 1174
+ V L+ P P +++ + + L DRV+NI VP G+R
Sbjct: 1167 RAPVVATVTAADLFRPNPLVNQDLTGQEVSQRSSVNRGAPNLGDRVINI-SARGVPFGHR 1225
Query: 1175 GTIIGIVQGETSYDAMYDVVF 1195
GT++ + ++D F
Sbjct: 1226 GTVVATHVSSRCVEVLFDEGF 1246
Score = 297 bits (760), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 165/411 (40%), Positives = 235/411 (57%), Gaps = 77/411 (18%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQI-PEFDNLYLDMNGIIHNCSHPNDNDPHFR-ITEK 58
MG+P+F+RY+SERYP L++ + + + PEFD YLDMNGI+HNC+H + D ++ +
Sbjct: 1 MGIPRFYRYMSERYPLLNQPISDVSLLPEFDAFYLDMNGIVHNCTHSDAADDALNSLSLE 60
Query: 59 QIFQDIFHYIE-ILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 117
IF Y++ ++ +I+PKKL ++AIDGVAPRAK+NQQR RRFR+ + + K +
Sbjct: 61 GQLHGIFTYLDRLITHIIKPKKLVYIAIDGVAPRAKLNQQRSRRFRAGLDRQQAMDKERH 120
Query: 118 KGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 177
+L EK DG KAK
Sbjct: 121 MQIKLQDEK--------------------DG-------------------------HKAK 135
Query: 178 EKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVI 237
+FDSNCITPGT F+ +L Q L YFV+ K+ +D L W + V
Sbjct: 136 S------VASKFDSNCITPGTEFLSKLSQHLVYFVRQKMKSDPL---------WARLEVF 180
Query: 238 LSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE 297
SG E PGEGEHKI+++IR+ K DY N+RHC+YG DADL++LGL THEP+F+L+RE
Sbjct: 181 FSGSEVPGEGEHKIVEFIRHRKMTDDYEANLRHCMYGSDADLMLLGLMTHEPHFTLVRET 240
Query: 298 VKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDW 357
V + + K ++ + EE ++ L+HLSL R+YL +E + P E ++DD+
Sbjct: 241 VVWGSHHKKVAAKQI--EEQQWQLVHLSLFREYLMMEMR-------VQSPLDGERMLDDF 291
Query: 358 VLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNL 408
+L+ FL+GNDFIP+ P L I A+PLL KVY+E+L T ++G YL L
Sbjct: 292 ILLTFLLGNDFIPHSPTLEISEDAIPLLLKVYRELLET-----HQGSYLTL 337
>gi|325185573|emb|CCA20056.1| 5'3' exoribonuclease 1 putative [Albugo laibachii Nc14]
Length = 1515
Score = 412 bits (1058), Expect = e-111, Method: Compositional matrix adjust.
Identities = 377/1312 (28%), Positives = 601/1312 (45%), Gaps = 231/1312 (17%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKR--------F 189
P+KL ++AIDGVAPRAK+NQQR RRF + V ++K KE L EK F
Sbjct: 80 PRKLVYLAIDGVAPRAKLNQQRSRRFSAGL---VRQEKVKELA--LEMEKNGTTCEKDLF 134
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DS+CITPGT F+ R+ +QL YF++ KI D LW + V SG E PGEGEH
Sbjct: 135 DSSCITPGTEFLERISEQLVYFIRHKIKNDPLWSR---------LEVYFSGSEVPGEGEH 185
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV-----KFNTKS 304
KIMD+IR K Y+ N+RHC+YG DADL++L L HEP+F+L+RE V F +K
Sbjct: 186 KIMDFIRQRKMSARYDANVRHCMYGSDADLMLLSLMAHEPHFTLIREHVDWGSGGFKSKG 245
Query: 305 NKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEP--GVLSFPFSI--ENIIDDWVLM 360
GS+ +E ++ L+HLSL R+YL +E ++K P G + + E +IDD++ +
Sbjct: 246 KLSGSEKKKIQEDQWQLVHLSLFREYLMMEM-RVKYPLGGQVQIDERLDGERMIDDFIFL 304
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVL---PTLDGYINEGGYLNLKRFEKFLTK 417
FL GNDFIP+ P L I A+P+L KVY+E+L ++ + G +N++ + K
Sbjct: 305 TFLFGNDFIPHSPTLEIRENAIPILLKVYRELLDEQKSVQYLTDSGKLVNVELLQALFLK 364
Query: 418 LASFDFEQFREKYADIQYLEGKMGKKFSD----VFHKEKSK---------EMDPDLAALI 464
+ S + E+ K A+++ + SD + + +K E+D D AA I
Sbjct: 365 IGSME-EEILSKRAEVERKKRNRKHYRSDKRPAIPDEIDTKCMPQLPVVDELDEDEAAEI 423
Query: 465 K-----------ATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYH 513
+ + D+Y+D E+L + E + +D +W T + +FG + D
Sbjct: 424 EFALALDQEAEFDSQDEYEDDVSELLTLSGTESF----QDTKW-TYYERKFGLQRGD--- 475
Query: 514 YKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKD----- 568
N L++ + ++ A+ W L YY+ G SWSWYYPHHY+P ISD+
Sbjct: 476 -----GDAGNSDLQEIRKHFLEALVWCLAYYFQGPPSWSWYYPHHYSPMISDLTGIADIL 530
Query: 569 ----FSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFA 624
F ++ + P LPF+QLLA LP++S LLP+P+Q LM SPI +YP F
Sbjct: 531 KEITFPSVSETGAVDGPLLPFEQLLANLPSSSAHLLPKPFQFLMQSPLSPIKHFYPATFQ 590
Query: 625 TDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHL----LTDEERSRNR---HGPMLVYTY 677
D+ GK+ DWE V ++PFID +L A+ +EH LT+ E RNR H +V+
Sbjct: 591 VDMEGKRNDWEGVTVLPFIDIEQLRAAI--LEHCPMDQLTEAECKRNRLQLHALKIVHDS 648
Query: 678 SNV-NLGTAL-APDYFPAINENHA-VEKPLYRDDIYVHPNKLRKGLCQDV---NLKLYVT 731
+ + ++L FP I H+ VEK + KL G Q +KL +
Sbjct: 649 KALETVKSSLHGKSGFPDIAPCHSRVEK---YSAASIQATKLFHGSYQSRLLPGVKLPLP 705
Query: 732 HFPTLKHVQFTH--KIENAKVKVFQQPSRNESIIIVQDK---VQVPSLKQVADQILGKTI 786
FP+L + TH ++E + F PSR E++++ D + VPS DQ+LG +
Sbjct: 706 GFPSL-YTTLTHSCRVECVSINCFGFPSRKETLVVQVDNSAGISVPS-----DQLLGCNL 759
Query: 787 FINYPHLIEIRVQAVATKDSR---ISFDKNSGPVFERAAKDMQDAFQLSKKSITDGY-YT 842
+N+PHL E V V+T I KN + ++ D + ++ + +G Y
Sbjct: 760 NVNWPHLHEALVVGVSTAMEEYRSIKQGKNGAEMIQKIDYDANGRKEWARYAHAEGIKYL 819
Query: 843 K-------LGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNL 895
K G+D+G V+ + +E G V ++ F + +Q VL
Sbjct: 820 KGRGIPGTGGIDLGEVTKCVHVRLLEG--IVRDSNGSV--RKVFGKDEAVLPFQLLVLQE 875
Query: 896 QQAR----ESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSF-KVQQ 950
+ + + TIDE F + + G G V EN+ +K+ ++ +
Sbjct: 876 SMPKDIRFQEIGPLTIDEQFPITSRVLITAGKWIGCLGIVRDY---ENAKVKVEVNEIDR 932
Query: 951 EPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNI--- 1007
EP ++ Y+ + A++L IS L TGS+F++D E G K H+
Sbjct: 933 EPPFG--YNIASQLCDQYISGHEAANRLGISKSTLGILTGSLFVMD-MELGLKLHSYREH 989
Query: 1008 ---------------GLNIKFSRK---NEEVVGFTRRDETTKK----------------- 1032
G N K E+V R +T K
Sbjct: 990 ILPGYCRLVEMSSHPGRNAHPRHKKQSQEDVASVWRTGDTIKILGSTKSTKNKPNDKDRD 1049
Query: 1033 -------WFYTEQVVTLIKNYMKQFPEVFGFLKD-------HSSDDIY-LRDDVFPHQGE 1077
W Y+E+ +TL+ Y+ +F ++ +S ++ RD+ +
Sbjct: 1050 LGGPRSFWEYSERAMTLLSEYVSKFASFVRTIEQLDPSQMRRASHKLFGTRDEAL---AQ 1106
Query: 1078 QRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNK-- 1135
+ ++I SW+ E + P + V + + IE A + + E++ K
Sbjct: 1107 KYASEIASWV-ESKKVNLQYAPVDSQHVSLEAMQAIE-AAGSARRAERERHFSTKSQNPI 1164
Query: 1136 -------LYIPKPTLDKLCPDPDTKFK---------LFDRVVNIRDCYT-VPLGYRGTII 1178
L++P ++ + + + DRVVNI C VP+GYRGT++
Sbjct: 1165 HLLPRAHLFVPNSHCNQDVTGVEVSKQASANRGSPVIGDRVVNI--CAREVPMGYRGTVV 1222
Query: 1179 GIVQGETSYDAMYDVVFDKPFPHGVKIRCSES--RGYRMPAQAMINLSYGERLCGNSNP- 1235
+V+FD+ F G + ++S RG +P ++ +S + + P
Sbjct: 1223 ATFVSTKC----VEVLFDESFIGGESLYGTKSMDRGKIVPWNNLLCVS---KPSESHRPL 1275
Query: 1236 HVKNINVMQSRGERNTNYAQVTRQ---PQRTTFYKENAPLVNSNLQVTSPYH 1284
H+ SR +N + ++R+ P + +E P + +++ V P H
Sbjct: 1276 HLDTWKKAHSRESKNIDSGNLSRKEFDPSKKA--QEFVPGIPASVHVPEPTH 1325
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 83/120 (69%), Gaps = 6/120 (5%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQI-PEFDNLYLDMNGIIHNCSHPNDN-DPHFRITEK 58
MG+P+F+ YISERYP +++ + + PEFD YLDMNGI+H C+H N++ D T +
Sbjct: 1 MGIPRFYAYISERYPLINQTISGLSLLPEFDCFYLDMNGILHVCTHNNNSSDDASPATFE 60
Query: 59 QIFQDIFHYIEILFR-MIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 117
+ FQ I Y++ L +++P+KL ++AIDGVAPRAK+NQQR RRF + V ++K KE
Sbjct: 61 EQFQAIVRYLDRLVTCIVKPRKLVYLAIDGVAPRAKLNQQRSRRFSAGL---VRQEKVKE 117
>gi|356505926|ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 960
Score = 412 bits (1058), Expect = e-111, Method: Compositional matrix adjust.
Identities = 264/727 (36%), Positives = 376/727 (51%), Gaps = 144/727 (19%)
Query: 1 MGVPKFFRYISERYPC-LSEVVRE----------YQIP-----EFDNLYLDMNGIIHNCS 44
MGVP F+R++++RYP +++VV E P EFDNLYLDMNGIIH C
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEEPSVGSGAVDVSKPNPNGMEFDNLYLDMNGIIHPCF 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
HP+ T + +F+ IF YI+ +F +++P+KL ++AIDGVAPRAKMNQQR RRFR+
Sbjct: 61 HPDGKSA--PTTYEDVFKSIFDYIDHIFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFRA 118
Query: 105 AKEAEVLEQKAKEKG-ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRF 163
AK+A + E ERL E +G
Sbjct: 119 AKDAAEKDAAEAEAEIERLREE--------------------FEG--------------- 143
Query: 164 RSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWK 223
E ++L K K + +DSN ITPGTPFM L L+Y+++ ++ + W+
Sbjct: 144 ----EMKLLSSKVK--------PETYDSNVITPGTPFMGVLSVALQYYIQTRLNYNPGWR 191
Query: 224 DTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLG 283
+T VILS PGEGEHKIMDYIR ++ P +NPN RHCLYGLDADLIML
Sbjct: 192 NT---------KVILSDSNVPGEGEHKIMDYIRLQRNLPGFNPNTRHCLYGLDADLIMLS 242
Query: 284 LCTHEPYFSLLREEVKFNTKSNKG--GSQIV----------------------TP-EETK 318
L THE +FS+LRE + F + K Q+ TP + K
Sbjct: 243 LATHEVHFSILREVITFPGQQEKCFQCGQVGHFAAECRGKPGEKAEDWNPVDDTPIHKKK 302
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
+ L++ ++R+YL+ E P F E I+DD+V + F +GNDF+P++P L I
Sbjct: 303 YQFLNIWVLREYLQYEMEIPNPP----FEIDFERIVDDFVFLCFFVGNDFLPHMPTLEIR 358
Query: 379 NGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEG 438
GA+ LL +Y++ + GY+ E G + L+R E F+ +A + + F ++ Q E
Sbjct: 359 EGAVNLLMHIYRKEFTAMGGYLTEAGEVFLERVEHFIQSVAVHEDQIFLKRVRIQQATE- 417
Query: 439 KMGKKFSDVFHKEKSKEM--DPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEW 496
++ EM +P + L K L Y+E YY++
Sbjct: 418 -----INEEMKARARGEMPGEPRASVLDKVK-----------LGEPGYKERYYAE----- 456
Query: 497 RTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYP 556
+FG LD K+ ++ +D Y+ + W YYY G SW WYYP
Sbjct: 457 ------KFG---------ALDLEKI-EKIKKDTVLKYVEGLCWVCRYYYQGVCSWQWYYP 500
Query: 557 HHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPIL 616
+HYAP+ SD+KD + L + + +GEPF PF QL+ LPA+S LPE Y++LM +SPIL
Sbjct: 501 YHYAPFASDLKDLADLEITFFLGEPFKPFDQLMGTLPASSSSALPEKYRDLMIDPSSPIL 560
Query: 617 EYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
++YP +F D+NGK+ W+ V +PFIDE KL+ A +E LT+EE+ RN L+Y
Sbjct: 561 QFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLLSATSKLEATLTEEEQLRNSKMLDLLYV 620
Query: 677 YSNVNLG 683
S NL
Sbjct: 621 SSAHNLA 627
>gi|89269888|emb|CAJ83489.1| 5'-3' exoribonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 385
Score = 411 bits (1057), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/314 (62%), Positives = 240/314 (76%), Gaps = 13/314 (4%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGEVLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + LSGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVAIYLSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K N+ +
Sbjct: 181 IMEFIRSQKTKPDHDPNTRHCLYGLDADLIMLGLTSHEVHFSLLREEVRFGGKKNQ--KR 238
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LK +SF + +E IIDDW+LMGFL+GNDFIP
Sbjct: 239 VTAPEETTFHLLHLSLMREYIDYEFSSLKNK--ISFEYDVERIIDDWILMGFLVGNDFIP 296
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY+ Y VLPT+ GYINE GYLNL F K+L KL+ FD E F E +
Sbjct: 297 HLPHLHINHDALPLLYRTYISVLPTIGGYINENGYLNLYNFGKYLEKLSDFDREHFNEIF 356
Query: 431 ADIQYLEGKMGKKF 444
D+++ E K+G K+
Sbjct: 357 VDLKWFESKVGNKY 370
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/129 (81%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRITE +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRITEDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAVEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 VLPTEARFD 129
>gi|325186843|emb|CCA21388.1| 5'3' exoribonuclease putative [Albugo laibachii Nc14]
Length = 1023
Score = 411 bits (1057), Expect = e-111, Method: Compositional matrix adjust.
Identities = 258/780 (33%), Positives = 380/780 (48%), Gaps = 182/780 (23%)
Query: 1 MGVPKFFRYISERYP-----------CLSEVVREYQIP----------EFDNLYLDMNGI 39
MGVP F+R++ +YP + E R Y++ E NLY+DMNG+
Sbjct: 8 MGVPAFYRWVLAKYPKCVVDCKEQNAVMIEGKRHYELLNITGPNPNELEVANLYIDMNGL 67
Query: 40 IHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
IH C+HP + + QPK
Sbjct: 68 IHPCAHPENGE-------------------------QPKT-------------------- 82
Query: 100 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQR 159
E + Q+ E +RL R P+++ ++AIDGVAPRAKMNQQR
Sbjct: 83 --------EEEMYQRVMEYVDRLVAAVR----------PRRVLYLAIDGVAPRAKMNQQR 124
Query: 160 GRRFRSAKEAEVLEQKAKEKGERLPT----------EKRFDSNCITPGTPFMCRLHQQLR 209
RRFRSAKEAE + KE E + K +DSN ITPGT FM +L + LR
Sbjct: 125 ARRFRSAKEAEERGEIEKEAIEYMKAMGHQVQEQDQSKNWDSNVITPGTKFMSKLSKYLR 184
Query: 210 YFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMR 269
++++ +I ++ WK + VI S PGEGEHK+M +IR +S+P Y+PN
Sbjct: 185 FYIRERINQNE---------AWKSIKVIFSDASVPGEGEHKLMSFIRLQRSQPGYDPNQH 235
Query: 270 HCLYGLDADLIMLGLCTHEPYFSLLREEVKFNT------KSNK------GGSQ------- 310
H L+GLDADLIMLGL THE FS+LREEV F KSN+ G+Q
Sbjct: 236 HVLHGLDADLIMLGLATHEVNFSILREEVLFGKQKYEKEKSNQQTILDANGTQDMRKKKR 295
Query: 311 ---------IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMG 361
++ ++T LH++ +R+YLE EF L + L FP+ E ++DD+V +
Sbjct: 296 GEHGEHDADVIPTDQTPLQFLHIATLREYLEFEFLPLAQ--TLPFPYDFERVVDDFVFLC 353
Query: 362 FLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASF 421
F +GNDF+P+LP L I +GAL L +Y ++LPTL+GY+ + G +NL R L ++ +
Sbjct: 354 FFVGNDFLPHLPSLDIRDGALDFLILMYAKLLPTLNGYLTDAGEVNLSRVNAILAQVGAV 413
Query: 422 DFEQFREKYADIQYLEGKMGKKF--------------SDVFHKEKSKEMDPD-------- 459
+ E F + A + +F SD +K + +D
Sbjct: 414 EDEVFLRRAAKQAESDRFRKNRFSNEKKDQIGAASVRSDAVEIQKKRRLDQTNVIADAKY 473
Query: 460 --------LAALIK-ATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTD 510
+ A +K D D +EV + E W+ ++S+ + K D
Sbjct: 474 GGMSAEQAIQARVKEMVDGQLDKHRQEVNDVVRLGE-------PGWKARYYSD--KFKAD 524
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
+ AKV + Y+ + W + YYY+GC SW+W+YP HYAP+ SD+ +
Sbjct: 525 DIAHGGGKAKVL--------QSYVEGLCWVMKYYYSGCASWNWFYPFHYAPFASDLVNID 576
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ + +G+PF PF+QL+ V PAAS +P+PY+ L+ SPI+++YP E D NGK
Sbjct: 577 KFTISFHLGQPFRPFEQLMGVFPAASGHAIPKPYRWLLRDPKSPIIDFYPTEIPVDPNGK 636
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN-RHGPMLVYTYSNVNLGTALAPD 689
W VVL+PFIDE +L++AM+ L+ E+ RN R+G +V+ +S+ L PD
Sbjct: 637 PMPWLWVVLLPFIDEARLLQAMEPENEKLSALEKKRNQRYGKEIVFFHSDCRLTKDSLPD 696
>gi|358340790|dbj|GAA27297.2| 5'-3' exoribonuclease 1 [Clonorchis sinensis]
Length = 1804
Score = 411 bits (1056), Expect = e-111, Method: Compositional matrix adjust.
Identities = 255/755 (33%), Positives = 388/755 (51%), Gaps = 133/755 (17%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K F+A+DGVAPRAKM QQR RRF+SA+EA + A+++G+ E FD I+PG
Sbjct: 15 PRKTLFLAVDGVAPRAKMTQQRARRFQSAQEARKTKADAQKRGQATSVE-LFDPCVISPG 73
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RLH L+ FVK + ++ WK V +ILSGH+ PGEGEHKI +Y+ +
Sbjct: 74 TEFMERLHNVLKEFVKEQANQNE---------AWKHVDIILSGHDCPGEGEHKIREYMSF 124
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
+ +PDY PN R+C+YG+DADLI LGL THE +LRE V TK+ E+
Sbjct: 125 KRHQPDYCPNERYCIYGMDADLIFLGLTTHELNMCILRENV-VKTKT-------CVAEQL 176
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F + +LS++R+Y++ EF LK L FP+ +E I+DDW+ M FL+GNDFIP++P+LHI
Sbjct: 177 PFCVTYLSVLREYIDCEFEALKN--SLPFPYDLERIVDDWIFMAFLLGNDFIPHIPNLHI 234
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
+L +L+ Y VLP LDGY+ E G LNL+RF +++ +L+ F+ F E+ AD +++
Sbjct: 235 HAESLLVLWDTYHVVLPQLDGYLVEYGRLNLQRFHRYIEELSKFEQSWFEEREADHRWMR 294
Query: 438 GK----MGKKFSDVFHKEKSKEM---------------DP-----------DLAALIK-- 465
GK M ++ + + S E DP L AL
Sbjct: 295 GKRGAQMARELATLGDGAGSTEQHQVNNTSKEPPSGSPDPKPRKSIENELSSLTALTSLF 354
Query: 466 ATDD----DYDDGTEEVL-----------------------NYANYEEYYYSDEDEEWRT 498
A DD ++ D TEE++ + ++ S E
Sbjct: 355 AADDLFHGEFLDETEELIAEGVISHIPSAQETKPQNDLIASQLVDADQLLSSSSSFEDDA 414
Query: 499 NFFSE-----FGQHKTDYYHYKLDYAKVTNEVLRDQ----AECYIRAIQWNLHYYYNGCV 549
S+ + H+ DYY KL + E L+ + Y+R +QW L YY+
Sbjct: 415 ELLSDEDELVYRMHRRDYYWTKLSIPVGSEEELKRRLMPLVTDYVRMLQWILSYYFLRVA 474
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYEMG-----------------EPFLPFQQLLAVL 592
W++YY +HYAP+ D+ ++ ++G +P LPF Q + ++
Sbjct: 475 DWNFYYAYHYAPFACDLMLYTAQFANSQLGSSSDNEDLSWTKFDFDSQPVLPFVQQMMIM 534
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAM 652
PA ++P+ +++LMT +SP+ ++PE FATD+NGK WEAVVLIPFIDE L+KAM
Sbjct: 535 PADGAYIVPQVFRSLMTSSDSPLAPFFPETFATDINGKIASWEAVVLIPFIDETILLKAM 594
Query: 653 DAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTA-------LAPDYFPAINENHAVEKPLY 705
+ + LT E+ RN+H L Y + + A YF HA+
Sbjct: 595 EPLNKGLTAAEQKRNQHNSHLFYPACSPDPCGCPKISVVQFAHTYF----REHALWTVAE 650
Query: 706 RDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII- 764
+ Y P + T FP+L + FT + + V +F+ PS+ +S+ +
Sbjct: 651 MQEFYNRPE------------RAISTDFPSLFRLPFTTALRHIPVHIFETPSKLQSLTLY 698
Query: 765 ---VQDKVQVPSLKQVADQILGKTIFINYPHLIEI 796
+D + S++Q+A+++LG I + +PH +
Sbjct: 699 VKRCKDLTGI-SMEQLANRLLGHPIRVRWPHCAVV 732
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 141/370 (38%), Gaps = 74/370 (20%)
Query: 910 IFYPGCQCFALSNPHYGSGGCVISTVKEENSF-IKLSFKVQQEP-DLSDLVH-LQDDTVY 966
+F+ G F + PH G G V+ S ++L + P DL+ L L +
Sbjct: 960 VFHVGQLVFVQTPPHTGRVGEVVGVRVAHGSVTVRLYPQASSHPIDLAPLRKKLSETRAS 1019
Query: 967 NYLPSYTVASKLSISPLLLSRFTGSIFII----DSTEE---------------------- 1000
Y+P+ +A+ + + P ++R TG++ + D+T +
Sbjct: 1020 CYMPTSQLAASIGLHPAAVARLTGTVLVCTTNKDTTHDSQAVAVENTDQVDKAAAASEVN 1079
Query: 1001 ------GAKRH--------NIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNY 1046
+K++ NIGLN++ ++ +V+G++R W ++ + Y
Sbjct: 1080 SCDKTSASKKNTQDRKYLWNIGLNLRRNKTRAQVLGWSRFCPDRSSWVFSNCTADYLLAY 1139
Query: 1047 MKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVD 1106
+FP+++ L + S++ + + V +L++ A V P + +D
Sbjct: 1140 SNEFPKLWS-LVEAQSENTRSGGPIICDLSRGELDAAVEFLEQSGCRSAAVVPADGSYLD 1198
Query: 1107 AKVVSLIEHAV------DTCEKV--------------EKQITLFVKPNKLYIPKPTLDKL 1146
+ I V E V +K + P L++P L
Sbjct: 1199 CDFIKHIRTIVYPDVTDGGGETVRAGHVYQPLDRKAWQKSHAIHCAPESLFVPINGSRSL 1258
Query: 1147 CPDPD--------TKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKP 1198
P D F L DRV + TVP+G GT+IG+ S +V+FDK
Sbjct: 1259 YPSSDGASHKFSMNNFCLLDRVTFCKSGQTVPIGLCGTVIGVTPNGLS--QTVEVMFDKE 1316
Query: 1199 FPHGVKIRCS 1208
FP V IR S
Sbjct: 1317 FPGAVDIRGS 1326
Score = 65.1 bits (157), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%)
Query: 69 EILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTE 125
+ L ++I+P+K F+A+DGVAPRAKM QQR RRF+SA+EA + A+++G+ E
Sbjct: 7 QYLVQLIRPRKTLFLAVDGVAPRAKMTQQRARRFQSAQEARKTKADAQKRGQATSVE 63
>gi|336262386|ref|XP_003345977.1| hypothetical protein SMAC_06532 [Sordaria macrospora k-hell]
gi|380089569|emb|CCC12451.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1428
Score = 411 bits (1056), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/441 (48%), Positives = 279/441 (63%), Gaps = 76/441 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + +D
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDTSD---------- 50
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ FRM + + F+AI
Sbjct: 51 ---------VQFRMTEEE--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PKKLFFMAIDGVAPRAKMNQQR RRFR+A + E KA
Sbjct: 65 -------FNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTALDNEKARDKAIR 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G+ LP E+ FDSNCITPGT FM +L QQLRYF+ K++ DK W+ ++L
Sbjct: 118 EGKELPKEEPFDSNCITPGTEFMAKLSQQLRYFINKKVSEDKDWQQP---------EIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR +++PDY+ N+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRNARAQPDYSANVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F K ++ + EE F+L+HL ++R+YLELEF LK+PG +SFPF +E +IDD++
Sbjct: 229 TFGRGPAKHKTKGL--EEQNFYLMHLCIVREYLELEFQDLKKPGAMSFPFDMEKVIDDFI 286
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP LHI GAL L++++Y+E+LP DGYINEGG +NL+R L +L
Sbjct: 287 LMAFFVGNDFLPNLPRLHINEGALSLMFRIYKEILPRGDGYINEGGKVNLQRLGLLLEEL 346
Query: 419 ASFDFEQFREKYADIQYLEGK 439
++ F ++ D +L K
Sbjct: 347 GKEEYRFFEHEHEDQGWLRAK 367
Score = 341 bits (875), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 252/803 (31%), Positives = 398/803 (49%), Gaps = 51/803 (6%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTN--EVLRDQAECYIRAIQWNLHYYYNG 547
+D + +F + K YY K + N E LR E Y++ +QW L+YYY G
Sbjct: 488 ADSKAAMEAKYQQKFQEWKDKYYAEKFEEWTPENKEEELRHLTENYVQGLQWVLYYYYRG 547
Query: 548 CVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNL 607
SW W+Y +HYAP ISD+ +L ++MG+PF P++QL+ VLP SK+++P Y +L
Sbjct: 548 IASWPWFYRYHYAPMISDVVKGLKADLNFKMGQPFKPYEQLMGVLPDRSKKIVPTVYWDL 607
Query: 608 MTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
MT +SPI+++YP +F D+NGKK DWEAVV IPFIDE +L+ AM LL+D E+SRN
Sbjct: 608 MTNPDSPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRLLAAMGPKNELLSDVEKSRN 667
Query: 668 RHGPMLVYTYS---NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDV 724
G L +TYS + ++L FP+I H +E D V + R GL
Sbjct: 668 DFGVALKFTYSDSVDFEYPSSLV-GVFPSIPHCHCIENIF--DLPPVEGLEYRVGLTDGA 724
Query: 725 NLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILG 783
L + FP+L + +T + + V VFQQ SRN+S+++ + + + A + LG
Sbjct: 725 LLNASALAGFPSLATLPYTASLGHHGVNVFQQESRNQSMVVNILDTEKRTNVEEAKRKLG 784
Query: 784 KTIFINYPHLIEIRVQAVATK--DSRISFDKNSGPVFERAAKDMQDAFQLSKKS--ITDG 839
K F+ YP L E ++ V+ + D ++ + SG V R + +D Q K + I +
Sbjct: 785 KRCFVGYPFLQEAKIVRVSDELFDYELA-EGGSGQVMSR-NHETRDIEQWGKTAHRIENF 842
Query: 840 YYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQA 898
Y +LG+ IG E LV+ + + G ++ I T YA Q V +
Sbjct: 843 YSKRLGILIGQVESLVHVHML--KGLIKTDEGATVKEYGPIPGMETDYAAQIIVDEVVNE 900
Query: 899 RESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLS 955
E + ++E F F L ++G + + L+ ++EPD +
Sbjct: 901 DERFIERAALPLEEEFPIKSVGFFLGEFNFGR-PVEVEGYSNNKLIVWLAALKEREPDFA 959
Query: 956 DLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSR 1015
+ + + Y+PS++VA L + PL LS+ T S FI T G R N+GLN+KF
Sbjct: 960 RQIMIDAERNNQYVPSWSVAKDLMLHPLTLSKITSSYFI---TTLGGLRVNLGLNLKFEG 1016
Query: 1016 KNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVF--P 1073
K ++V+G++R+ +T W ++ + +I YMK+FP+ F +K + S D++ P
Sbjct: 1017 KKQKVLGYSRKSQTG--WEFSPLAIGMIAEYMKRFPDFFAAIKQNPSGAELTETDLWSEP 1074
Query: 1074 HQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKP 1133
RV +I +WLK ++ E P A +D+ VV + D + + P
Sbjct: 1075 AVASARVKEIGAWLKTLKTSQMERVPLDAEQLDSDVVMRLAAEADRLQLGQLPAANKRVP 1134
Query: 1134 NKLYIPKPTLDKLCPDPDTK-----FKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYD 1188
N +P+ L + C D + + F L DRVV + + VP+ YRGT++GI + T+
Sbjct: 1135 N---VPRHALLRPC-DAEHRLGNQHFSLGDRVVYVAEVGKVPIAYRGTVVGISRVPTA-- 1188
Query: 1189 AMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGN--------SNPHVK 1238
+ DVVFD F G + RC RG +P+ +NL++ + + G+ +NP V
Sbjct: 1189 KLLDVVFDVTFMSGTTLGDRCPPFRGQTVPSHTCLNLTHRQVVVGSKAAMTRQPTNPSVT 1248
Query: 1239 NINVMQSRGERNTNYAQVTRQPQ 1261
+ G + N Q PQ
Sbjct: 1249 TLTAHGGYGSQ-ANDKQFRDAPQ 1270
>gi|358055066|dbj|GAA98835.1| hypothetical protein E5Q_05523 [Mixia osmundae IAM 14324]
Length = 1437
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/441 (48%), Positives = 268/441 (60%), Gaps = 78/441 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S++++E Q PEFDNLYLDMNGIIHNCSH +
Sbjct: 1 MGVPKFFRWVSERYPMISQLIQEGQQPEFDNLYLDMNGIIHNCSHKDGG----------- 49
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
D+ H + ++ F+AI
Sbjct: 50 --DVHHRVT--------EEQMFLAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKFC--FPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F +I L F PK+ FFMAIDGVAPRAKMNQQR RRFR+AKEA+ A
Sbjct: 65 -------FTYIELLFSKIRPKQTFFMAIDGVAPRAKMNQQRSRRFRTAKEAKEARDAAIR 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
KGE LP E FDSN ITPGTPFM RL QLRYFV K++ D W+ + VIL
Sbjct: 118 KGEELPKEDPFDSNAITPGTPFMTRLSAQLRYFVNKKVSEDA---------DWQGIQVIL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM +IR+ K++P YNPN+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMQFIRHSKAQPGYNPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F K+ K + E F+LLHLSL R+YL+LEF L L F + +E IIDD++
Sbjct: 229 VFG-KARKTSQSL---ETKNFYLLHLSLFREYLDLEFQSLAADPTLGFQYDLERIIDDFI 284
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
L+ +GNDF+P+LP LHI GAL LL+++Y+ VLP GYINE G LN R L +L
Sbjct: 285 LLAIFVGNDFLPHLPGLHINEGALTLLFEIYKRVLPKAGGYINEHGQLNTHRLSLILEEL 344
Query: 419 ASFDFEQFREKYADIQYLEGK 439
SF+ + F ++YAD + +GK
Sbjct: 345 QSFESDNFEKEYADSNWFKGK 365
Score = 318 bits (815), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 230/791 (29%), Positives = 379/791 (47%), Gaps = 69/791 (8%)
Query: 468 DDDYDDGTEEVLNYANYE------EYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKV 521
DD++ + +L A Y+ ++ +D ++ + + KTDYY KL++
Sbjct: 498 DDEWKEAISRIL--AKYDKAQTLPDFNEADFEDSYAQKLEQKMSAWKTDYYRDKLEFEFT 555
Query: 522 TNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEP 581
L A YI +QW LHYYY+G SW W+Y +HYAP ISD+++ H+ +++G P
Sbjct: 556 DKPALHQLAFRYIEGLQWVLHYYYDGVASWGWFYDYHYAPKISDLQNVDHMEFVFDLGRP 615
Query: 582 FLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIP 641
F PF+QL+ VLP S +LPE Y++L+T SPI ++YP +F DLNGKKQDWEAVV IP
Sbjct: 616 FKPFEQLMGVLPDLSATILPEAYRDLLTSPESPIKDFYPRDFKLDLNGKKQDWEAVVKIP 675
Query: 642 FIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGT--ALAPDYFPAINENHA 699
FID+ +L+ AM+ LT +E+ RN G ++TY + T + P +FP +
Sbjct: 676 FIDQARLLHAMEGRSARLTPDEQQRNTWGDSYIFTYDAAHFATYPSSLPGFFPDLQNCQT 735
Query: 700 VEKPLYRDDIYVHPNKLRKGLCQDVNL-KLYVTHFPTLKHVQFTHKIENAKVKVFQQPSR 758
P + V KGLC+ + K V FP+L VQFT ++ V VFQ S+
Sbjct: 736 KMLPYHLPT--VEHLDFVKGLCEGALIGKDAVAGFPSLHTVQFTAQLGYHSVNVFQFDSK 793
Query: 759 NESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPV 817
NESI++ + D ++ +++A Q++G+ I++ +P+L E V A+ S F + PV
Sbjct: 794 NESIVVTLDDAIEDGKPEEIAQQLIGQRIYVGWPYLREALVVAI----SNDLFRYEASPV 849
Query: 818 FERAAK------DMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRG 871
++ ++ + I + Y + GV IG E LV+ + ++ K
Sbjct: 850 APGRIDSIPHRPELIRGWRKAADRIEETYSKRFGVIIGGVETLVHVKLLKGLKRL----- 904
Query: 872 KVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKTIDEIFYP-------GCQCFALSNPH 924
I+ + A+ + Q S++ + +++ P F L
Sbjct: 905 ---DDGALIKEWEVNENEQALQTIVQDVSSVDARYLEQAAAPINVDFPENTNIFFLGVGE 961
Query: 925 YGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVH--LQDDTVYNYLPSYTVASKLSISP 982
YG+ V+ E N+ +F + ++ Q NYLPS V+ +L +S
Sbjct: 962 YGAPAKVVG--HEGNTAAIQTFTCALDAKEREIFRSLYQSLPQANYLPSPAVSRRLKMS- 1018
Query: 983 LLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTL 1042
+ + ++ N GLN+KF K ++V+G+TRR++ W Y+ + + L
Sbjct: 1019 ---ALTLSKLTSSLLLAYKEQKINAGLNLKFEAKAQKVLGYTRRNDFG--WEYSSRALKL 1073
Query: 1043 IKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQG-EQRVAQIVSWLKEQPHAKAEVRPCG 1101
+ +Y +FPE+ L D + DI D++P Q E + +I +W E V P
Sbjct: 1074 LTSYKAKFPEIVQAL-DGNKHDIQSLSDIYPAQMLEAKAKEIKAWTTEHTQDFERV-PLN 1131
Query: 1102 AAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLYIPKPTLDKLCPD------PDTKFK 1155
A ++ V ++E D + + Q T F + +P+ +L L P F
Sbjct: 1132 ADQLEKAQVQILEAKADELQNLRSQ-TEFKRKVFRGLPRSSL--LRPSHTGTRLQKQTFT 1188
Query: 1156 LFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPF--PHGVKIRCSESRGY 1213
DR++ + D VPL +GT++G+ + D+V D PF H + RCSE RG
Sbjct: 1189 TGDRIIFVSDIGHVPLAAKGTVVGVQV------KLIDIVVDVPFMGGHTLNGRCSEYRGL 1242
Query: 1214 RMPAQAMINLS 1224
+ ++NL+
Sbjct: 1243 SVEPTTVLNLT 1253
>gi|71052193|gb|AAH39314.1| XRN1 protein [Homo sapiens]
Length = 459
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/314 (62%), Positives = 239/314 (76%), Gaps = 14/314 (4%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKF 444
D+++ E K+G K+
Sbjct: 356 VDLKWFESKVGNKY 369
Score = 230 bits (586), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|121718863|ref|XP_001276218.1| exonuclease Kem1, putative [Aspergillus clavatus NRRL 1]
gi|119404416|gb|EAW14792.1| exonuclease Kem1, putative [Aspergillus clavatus NRRL 1]
Length = 1408
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/441 (48%), Positives = 283/441 (64%), Gaps = 77/441 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S ++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPTISMLIAENRIPEFDALYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I + PKKLFFMAIDGVAPRAKMNQQR RRFR+A +AEV ++KA
Sbjct: 65 -------FNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTALDAEVAKEKAIA 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L QQL+YF+ KI+ DK W+ V ++L
Sbjct: 118 QGIEMPKEDAFDSNCITPGTEFMAKLTQQLKYFISKKISEDK---------DWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR+ K++PDY+ N+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRHAKAQPDYDSNIRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F + K ++ E FFLLHL ++R+YLELEF +L++ GVL FPF +E +IDD++
Sbjct: 229 TFGRQVQKKPKEL---EHQNFFLLHLCMVREYLELEFQELEQEGVLDFPFDMERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL L++K+Y+EVLP + GY+NEGG +NLKR + L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALALMFKIYKEVLPKMGGYVNEGGVINLKRLGMLVEAL 345
Query: 419 ASFDFEQFREKYADIQYLEGK 439
+ +F F +Y+D +++ K
Sbjct: 346 SDVEFRFFEVEYSDAKWITAK 366
Score = 337 bits (865), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 238/747 (31%), Positives = 380/747 (50%), Gaps = 39/747 (5%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K YY K + +E +R E Y++ +QW L+YYY G SW W++ +HYAP
Sbjct: 505 KFQEWKDKYYMSKFGWGLDNHEEMRKLTENYVQGLQWVLYYYYRGIASWPWFFKYHYAPM 564
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+ ++ +++G+PF P++QL+ VLP SK+++P Y++LMT +SPI+++YP +
Sbjct: 565 ISDVTKGLKADMNFQLGQPFKPYEQLMGVLPDRSKKIVPAAYRDLMTSPDSPIIDFYPRD 624
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---N 679
F D+NGKK +WEAVV IPFI+E +L+ A+ HLLT EE+ RN G L +TYS N
Sbjct: 625 FELDMNGKKMEWEAVVKIPFIEERRLLDALATKSHLLTPEEKVRNDFGVSLKFTYSPDAN 684
Query: 680 VNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNL-KLYVTHFPTLKH 738
+ ++L P FP I H +E D + + GL V L + FP+LK
Sbjct: 685 YSYPSSL-PGVFPDIPNCHCIENVF--DLPTMDGLEPYIGLVDGVQLGAAALAGFPSLKT 741
Query: 739 VQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRV 798
+ ++ V VFQQ SRNES++I S ++A LGK +F+ YP L E V
Sbjct: 742 LPHVGQLGFHGVCVFQQESRNESMVITILDPGSRSSVELAKSKLGKRVFVGYPFLQEALV 801
Query: 799 QAVATKDSRISF---DKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLV 855
V D + D PV + D ++ I Y +LG IG + +V
Sbjct: 802 --VRVSDELFDYIIPDGEEHPVPIPHTEAQIDQWRKKADKIEGTYSRRLGTVIGPVDSMV 859
Query: 856 YGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQ---SAVLNLQQARESLEYKTIDEIF 911
+ Q ++ G ++ I T YA Q V+N + + I++ F
Sbjct: 860 HVQLLKG--LIKTDEGATIKEFADILGQETDYALQLVVDEVINPDERFIERDALPIEKEF 917
Query: 912 YPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKV-QQEPDLSDLVHLQDDTVYNYLP 970
G + F L + +YG V T ++ L + +EP+ + + + Y+P
Sbjct: 918 PEGSRAFFLGDYNYGR--PVHVTGHDDGKVNGLIASIPGREPEFGKERAREAEKLCPYMP 975
Query: 971 SYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETT 1030
S+ +A L ++PL+L++ T S S + +R N+GLN+KF + ++V+G++RR ++
Sbjct: 976 SFAIARSLRLNPLVLAKITSSF----SVDVEGQRVNLGLNLKFEARKQKVLGYSRRGDSG 1031
Query: 1031 KKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWLKE 1089
W ++++ V L++ YM +FPE ++ + D Y D +P Q++ +I WLK
Sbjct: 1032 --WEFSQRTVDLLQQYMIKFPEFIAGIQRNPQRDRYNPADFYPEDVALQKIQEIKDWLKS 1089
Query: 1090 QPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQI----TLFVKPNKLYIPKPTLDK 1145
E P A +D++VV LIE D + + Q+ V + L P +
Sbjct: 1090 IEAKNFERVPLEAEQLDSEVVKLIEQDADRLMQSQPQMQAKKVRGVPRSALLRPSDVEQR 1149
Query: 1146 LCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI 1205
L + FKL DRVV +D VP+ RGT++G+ + TS + DVVFD F G +
Sbjct: 1150 L---QNQSFKLGDRVVYAQDSGKVPIATRGTVVGLTR--TSRAMLLDVVFDVSFMSGTTL 1204
Query: 1206 --RCSESRGYRMPAQAMINLSYGERLC 1230
RCS RG + A +++N+SY + L
Sbjct: 1205 GDRCSPFRGQTVLASSVLNVSYRQLLA 1231
>gi|356573066|ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 957
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 264/723 (36%), Positives = 377/723 (52%), Gaps = 138/723 (19%)
Query: 1 MGVPKFFRYISERYPC-LSEVVRE--------YQIP-----EFDNLYLDMNGIIHNCSHP 46
MGVP F+R++++RYP +++VV E P EFDNLYLDMNGIIH C HP
Sbjct: 1 MGVPAFYRWLADRYPLSITDVVEEDPSAGAVDVSKPNPSGMEFDNLYLDMNGIIHPCFHP 60
Query: 47 NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 106
D P T + +F+ IF YI+ +F +++P+KL ++AIDGVAPRAKMNQQR RRFR+AK
Sbjct: 61 -DGKPA-PATYEDVFKSIFDYIDHIFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFRAAK 118
Query: 107 EAEVLEQKAKEKG-ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRS 165
+A + E ERL R
Sbjct: 119 DAAEKDAAEAEAEIERL-----------------------------------------RE 137
Query: 166 AKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
E E+ +K+K E +DSN ITPGTPFM L L+Y+++ ++ + W +T
Sbjct: 138 EFEGEMKLLSSKDKPE------TYDSNVITPGTPFMGVLSVALQYYIQTRLNYNPGWWNT 191
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
VILS PGEGEHKIMDYIR ++ P +NPN RHCLYGLDADLIML L
Sbjct: 192 ---------KVILSDSNVPGEGEHKIMDYIRLQRNLPGFNPNTRHCLYGLDADLIMLSLA 242
Query: 286 THEPYFSLLREEVKFNTKS-----------------NKGGSQIV-------TP-EETKFF 320
THE +FS+LRE + F + K G + TP + K+
Sbjct: 243 THEVHFSILREVITFPGQQEKCFQCGQLGHFAAECRGKPGEKAEDWNPVDDTPIHKKKYQ 302
Query: 321 LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIING 380
L++ ++R+YL+ E P F E I+DD+V + F +GNDF+P++P L I G
Sbjct: 303 FLNIWVLREYLQYEMEIPNPP----FEIDFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 358
Query: 381 ALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKM 440
AL LL +Y++ + GY+ E G + L+R E F+ +A + + F+++ Q E
Sbjct: 359 ALNLLMHIYRKEFTAMGGYLTEAGEVFLERVEHFIQSVAVHEDQIFQKRVRIQQATE--- 415
Query: 441 GKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNF 500
++E D+ +A+ D + L Y+E YY++
Sbjct: 416 -------INEEMKARARGDMPGEPRASVLD-----KVKLGEPGYKERYYAE--------- 454
Query: 501 FSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYA 560
+FG LD K+ +++ +D Y+ + W YYY G SW WYYP+HYA
Sbjct: 455 --KFG---------ALDPEKI-DKIKKDTVLKYVEGLCWVCRYYYQGVCSWQWYYPYHYA 502
Query: 561 PYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYP 620
P+ SD+KD + L + + +GEPF PF QL+ LPA+S LP+ Y++LM +S IL++YP
Sbjct: 503 PFASDLKDLADLEITFFLGEPFKPFDQLMGTLPASSSSALPKKYRDLMIDPSSSILQFYP 562
Query: 621 EEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNV 680
+F D+NGK+ W+ V +PFIDE KL+ A +E LT+EE+ RN L+Y S
Sbjct: 563 ADFEIDMNGKRFAWQGVAKLPFIDEKKLLSATSKLEATLTEEEQLRNSKMLDLLYVSSAH 622
Query: 681 NLG 683
NL
Sbjct: 623 NLA 625
>gi|167861118|gb|ACA05276.1| putative ethylene insensitive 5/7 [Solanum lycopersicum]
Length = 696
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 261/725 (36%), Positives = 368/725 (50%), Gaps = 150/725 (20%)
Query: 1 MGVPKFFRYISERYPC-LSEVVREY---QIP-----------EFDNLYLDMNGIIHNCSH 45
MGVP F+R++++RYP + ++V E +P EFDNLYLDMNGIIH C H
Sbjct: 1 MGVPAFYRWLADRYPLSIVDMVEEEPKDDVPVDISKPNPNGMEFDNLYLDMNGIIHPCFH 60
Query: 46 PNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 105
P T +F IF YI+ LF +++P+KL +MAIDGVAPRAKMNQQR RRFR++
Sbjct: 61 PEGKPA--PATYNDVFNSIFDYIDHLFSLVRPRKLLYMAIDGVAPRAKMNQQRTRRFRAS 118
Query: 106 KEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRS 165
K+A E +A+EK R E
Sbjct: 119 KDAA--ESEAEEKRLREEFE---------------------------------------- 136
Query: 166 AKEAEVLEQKAKEKGERLPTEK--RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWK 223
EA +L +PTEK DSN ITPGTPFM L L+Y + ++ + W+
Sbjct: 137 -MEAAIL----------VPTEKPETSDSNVITPGTPFMAVLSIALQYNIHSRLNKNAGWR 185
Query: 224 DTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLG 283
T VILS PGEGEHKIM YIR ++ P +NPN RHCLYGLDADLIML
Sbjct: 186 FT---------KVILSDANVPGEGEHKIMSYIRLQRNIPGFNPNTRHCLYGLDADLIMLS 236
Query: 284 LCTHEPYFSLLREEVK-----------------------FNTKSNKGGSQIV-TP-EETK 318
L THE +FS+LRE + N K G + TP + K
Sbjct: 237 LATHEVHFSILREVITPPGQQEKCFACGQVGHLAASCHGTNGNHGKDGKAVNDTPIHKKK 296
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
+ LH+ ++R+YL+ + P F E ++DD+V + F +GNDF+P++P L I
Sbjct: 297 YQFLHIWVLREYLQYDLEIYNPP----FQIDFERVVDDFVFLCFFVGNDFLPHMPTLEIR 352
Query: 379 NGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEG 438
GA+ LL +Y+ T+ GY+ + G + L R E F+ A ++ + F+++ Q +E
Sbjct: 353 EGAINLLMSIYRRDFTTMGGYLTDAGEVFLDRVEHFIQAAAVYEDQIFQKRARIQQSIEN 412
Query: 439 KMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRT 498
++ KE + + P +K L Y+E YYS++
Sbjct: 413 ------NERVRKEANAQPHPPAEDKVK-------------LGEPGYKERYYSEK------ 447
Query: 499 NFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHH 558
+ + A+ +EV +D + Y+ + W YYY G SW W+YP+H
Sbjct: 448 ---------------FGVSTAEDIHEVRQDVVQKYMEGLCWVCRYYYQGVCSWQWFYPYH 492
Query: 559 YAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEY 618
YAP+ SD+K + L + + GEPF PF QL+ VLPAAS + LPE Y+ LM +SPI ++
Sbjct: 493 YAPFASDLKGLADLEITFFPGEPFKPFDQLMGVLPAASAKALPEKYRMLMMDPSSPISDF 552
Query: 619 YPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS 678
YP +F D+NGK+ W+AVV +PFIDE KL+ +E LTD E+ RN L+Y +
Sbjct: 553 YPTDFELDMNGKRFAWQAVVKLPFIDEKKLLAETKKLEDTLTDTEQLRNSVMFDLLYVHH 612
Query: 679 NVNLG 683
+ L
Sbjct: 613 HHTLA 617
>gi|357111459|ref|XP_003557530.1| PREDICTED: 5'-3' exoribonuclease 4-like [Brachypodium distachyon]
Length = 992
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 257/728 (35%), Positives = 372/728 (51%), Gaps = 144/728 (19%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIP-------------------EFDNLYLDMNGII 40
MGVP F+R++++RYP +S+ E + EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAAEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP T Q+F+ IF YI+ LF +++P+KL +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCFHPEGRPSP--TTYDQVFKSIFDYIDHLFCLVRPRKLVYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AK+A + + RL R DF
Sbjct: 119 RFRAAKDAADAAAEEE----RL----RLDF------------------------------ 140
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
E L QK K + DSN ITPGT FM L L+Y+++L++
Sbjct: 141 -----EAEGRTLVQKQKSEA--------IDSNVITPGTQFMFVLSSALQYYIQLRLNHTP 187
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W+ V V+LS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLI
Sbjct: 188 ---------GWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNK---------------GGSQ----IVTP--EETKF 319
ML L THE +FS+LRE + + K G +Q + P + K+
Sbjct: 239 MLSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRGPAQADNVVELPPIHKKKY 298
Query: 320 FLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN 379
L++ ++R+YLE + + P F + E I+DD+V + F +GNDF+P++P L I
Sbjct: 299 QFLNIWVLREYLEKDLEIVDPP----FKINFERIVDDFVFICFFVGNDFLPHMPTLEIRE 354
Query: 380 GALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGK 439
GAL LL +Y+ + GY+ +GG + L+R E F+ +A + + FR++ Q E
Sbjct: 355 GALNLLMAIYRSEFKPMGGYLTDGGEVLLERVEHFIQSVAVHEEQIFRKRARIQQAYENN 414
Query: 440 MGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTN 499
++ +E S++++P Y D + L Y E YY+++
Sbjct: 415 EERRKG---QRENSEDVNP------------YVDMVK--LGEPGYRERYYAEK------- 450
Query: 500 FFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHY 559
F E + +K ++V RD + Y+ + W + YYY G SW W+YP+HY
Sbjct: 451 -FREEAE------------SKPIDQVQRDVVQKYVEGLCWVMRYYYQGVCSWQWFYPYHY 497
Query: 560 APYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYY 619
AP+ SD+K + + + +G+PF PF QL+ LPAAS LP+ Y +LMT NSP+ +Y
Sbjct: 498 APFASDLKGLTEFEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMTDPNSPLKYFY 557
Query: 620 PEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSN 679
P++F D+NGK+ W+ + +PFIDE +L+ VE LT+EER RNR ++Y
Sbjct: 558 PKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKVEDSLTEEERFRNRTMFDIIYVRET 617
Query: 680 VNLGTALA 687
L +A
Sbjct: 618 HPLAAQIA 625
>gi|255557927|ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223540756|gb|EEF42316.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 1545
Score = 409 bits (1050), Expect = e-110, Method: Compositional matrix adjust.
Identities = 254/736 (34%), Positives = 370/736 (50%), Gaps = 151/736 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQ-------------IP-----EFDNLYLDMNGIIH 41
MG+P F+++++E+YP + +V+ + +P EFDNLYLDMNGIIH
Sbjct: 1 MGIPSFYKWLTEKYPDTVVDVIEARRRMGNGVLLPINTALPNPNGIEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP+D P + ++++F + FM ID
Sbjct: 61 PCFHPSDLPP------PKTYEEVFRNV-------------FMYID--------------- 86
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
K F + P+KL F+ IDGVAPRAKMNQQR R
Sbjct: 87 ------------------------KIFSMVR-----PRKLLFLGIDGVAPRAKMNQQRSR 117
Query: 162 RFRSAKEAEVLEQKAKE----KGERLPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKL 214
RFR+AKEAE K K+ +GE + K DSN ITPGT FM L LRY+++L
Sbjct: 118 RFRAAKEAEKEALKMKQFIELEGENSTSLKEPAVLDSNVITPGTEFMDLLSSALRYYIRL 177
Query: 215 KITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYG 274
++ D W+ + VILS PGEGEHKIM YIR + P Y+PN RHCLYG
Sbjct: 178 RVNRDS---------GWRGIKVILSDSNVPGEGEHKIMSYIRLQRDLPGYDPNTRHCLYG 228
Query: 275 LDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ-------------------IVTPE 315
LDADLIML L THE +F++LRE S +G + T E
Sbjct: 229 LDADLIMLALATHEVHFTILREVCAQKHSSKRGKKHKFVWNPQKKANSKKKKWMPVKTLE 288
Query: 316 E----TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPN 371
E F L++ +R++LE + ++ P L+ +E +IDD++ M +GNDF+P+
Sbjct: 289 EYVSRLNFKFLYIWALREHLEYD---MRIPN-LALQTDLERLIDDFIFMCLFVGNDFLPH 344
Query: 372 LPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYA 431
+P L I GA+ LL KVY++ + GY+ L+L R E F+ + D FR+
Sbjct: 345 IPTLEISQGAIDLLMKVYRKEFRRMGGYLTNSFELDLTRVEHFIQAVGLHDDAIFRQH-- 402
Query: 432 DIQYLEGKMGKK--FSDVFHKEKSKEMDPDLAALI--------KATDDDYDDGTEEVLNY 481
IQ L+ K +K S EK + DP ++ KA ++D E +++
Sbjct: 403 -IQKLKEKSARKEERSSKRKLEKLLQNDPHAESISGGSSLLMEKAGGMNFD----EPIHH 457
Query: 482 ANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNL 541
+ E+++W+ ++++ +K + RD Y+ + W +
Sbjct: 458 LSAGIDTGDKEEDDWKERYYAK---------KFKAKTKDEQESIRRDVVIKYMEGLCWVM 508
Query: 542 HYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLP 601
YYY G SW W+YP+HYAP+ SD L +++ +G PF P QL+ VLPAAS LP
Sbjct: 509 RYYYEGVCSWQWFYPYHYAPFASDFYGLDDLKIQFTLGVPFKPMDQLMGVLPAASAHALP 568
Query: 602 EPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTD 661
Y+ LMT E+SPIL++YP +F D+NGK++ W+A+ +PFIDE +L+ + VEH LTD
Sbjct: 569 MLYRKLMTDESSPILDFYPSDFELDMNGKRRKWQAICKLPFIDESRLLSEITKVEHTLTD 628
Query: 662 EERSRNRHGPMLVYTY 677
+ER RN G ++ +
Sbjct: 629 DERRRNSLGSNFLFVH 644
>gi|345569898|gb|EGX52724.1| hypothetical protein AOL_s00007g507 [Arthrobotrys oligospora ATCC
24927]
Length = 1409
Score = 408 bits (1049), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/444 (47%), Positives = 276/444 (62%), Gaps = 77/444 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAENRIPEFDALYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEEK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PKK FFMAIDGVAPRAKMNQQR RRFR+A + E QKA +
Sbjct: 65 -------FNYIEHLFGKIKPKKTFFMAIDGVAPRAKMNQQRARRFRTALDNEKAYQKAVK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
G +P E FDSNCITPGT FM +L +QL+YF+ K++ D W+ + +IL
Sbjct: 118 DGVEMPKEDPFDSNCITPGTGFMAKLSEQLKYFINKKVSDDA---------EWQGLEIIL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P YNPN+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRLTKAQPGYNPNLRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F + K ++ E F+L+HLS++R+YLELEF +LKEPG+LS P+ E ++DD+V
Sbjct: 229 TFGRNNQKKSKEL---EHQNFYLMHLSIVREYLELEFQELKEPGLLSVPYDFERVLDDFV 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
L+ F +GNDF+P+LP LHI GAL L++K+Y++VL GYIN+ G +NL+ L ++
Sbjct: 286 LLAFFVGNDFLPHLPGLHINEGALSLMFKIYKKVLTKAKGYINDHGQVNLETLGLVLDEM 345
Query: 419 ASFDFEQFREKYADIQYLEGKMGK 442
F+++ F + AD +L GK K
Sbjct: 346 EEFEYKVFETETADASWLRGKQMK 369
Score = 375 bits (964), Expect = e-100, Method: Compositional matrix adjust.
Identities = 250/744 (33%), Positives = 392/744 (52%), Gaps = 43/744 (5%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + YY K + E +R AE YI IQW L YYY G SW W++ +HYAP
Sbjct: 502 KFRAWRDGYYKAKFGFGLDDTEEMRGLAENYIEGIQWVLFYYYRGVASWGWFFRYHYAPK 561
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K NL + +G PF PF+QL+ VLP SK+++PEPY LMT +SPIL++YP +
Sbjct: 562 ISDVKKGLGANLNFRLGSPFRPFEQLMGVLPDRSKKIVPEPYHVLMTSPDSPILDFYPRD 621
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNV-- 680
F D+NGKKQDWEAVV IPFI E +L+ AM EHLLT +E SRN G L +TYS
Sbjct: 622 FELDMNGKKQDWEAVVKIPFIQEDRLLAAMRTREHLLTKDEISRNGFGITLKFTYSESVD 681
Query: 681 NLGTALAPDYFPAINENHAV----EKPLYRDDIYVHPNKLRKGLCQDVNL-KLYVTHFPT 735
+L + P FP + H V E P + L +GLC+ V L + + FP+
Sbjct: 682 SLYASSMPGIFPDVCHCHCVMNEFELPTLDGGL-----NLIQGLCEGVRLGRNALAGFPS 736
Query: 736 LKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVP-SLKQVADQILGKTIFINYPHLI 794
LK ++ T ++ V VFQQ S+NES++I P +++ +A + + + + YP L
Sbjct: 737 LKSLEHTGQLLYHSVNVFQQDSKNESMVITLIHPPKPGTVESIAQSKINQRVHVGYPFLG 796
Query: 795 EIRVQAVATKDSRISFDKNSGPVFERAAKDM-QDAFQLSKKSITDGYYTKLGVDIGNTEV 853
E +V AV+ + + D G V + + D +D ++ I + Y ++G+ +G+ ++
Sbjct: 797 EAQVFAVSDELFVYTLDAQ-GRVQKNSHNDKGRDLWRTKADRIENNYSKRMGMIVGSVDI 855
Query: 854 LVYGQPVES-RKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLN--LQQARESLEYKTIDEI 910
+V+ ++ R+ G V + I YA Q+ V + + + +E +D
Sbjct: 856 VVHVNHLKGLRRTDEG--AMVKEFENIIGQDTDYALQTIVDSGRVSEDERFVERAAVDIA 913
Query: 911 --FYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNY 968
F G +CF L + +YG ++ +++ + I +S +EPD + V +T+ +Y
Sbjct: 914 TEFPLGSRCFFLGDYNYGR-PLEVTGHRDDRADIWISILRTKEPDFGNRVAFLINTMSDY 972
Query: 969 LPSYTVASKLSISPLLLSRFTGSIFI-IDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRD 1027
PSY VA L ++ L+LS+ T S + +D T R N+GLN+KF K +V+G++R+
Sbjct: 973 KPSYAVAKNLGLTSLVLSKITSSFQVQVDDT-----RQNLGLNLKFEAKKLKVLGYSRK- 1026
Query: 1028 ETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFP-HQGEQRVAQIVSW 1086
T W ++ + V LI YM++FPE F ++ + D Y +D +P + ++ +I W
Sbjct: 1027 -TGSGWEFSSKAVALISEYMQKFPEFFHGIERRPTADNYSAEDFYPAGTAKAKIKEIQLW 1085
Query: 1087 LKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKV----EKQITLFVKPNKLYIPKPT 1142
LKE E P A +DA +IE D ++ E + V L P
Sbjct: 1086 LKEIEAKSFEKVPLEAQQLDADSCRIIEGEADKYVELLGNPEAKQVRGVPRKALLKPSDA 1145
Query: 1143 LDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHG 1202
+L D +F L DR+V ++D VP+ +GT++GI + T+ + DVVFD F G
Sbjct: 1146 EHRLH---DQRFDLGDRIVYVQDSGKVPIATKGTVVGITK--TARTTLLDVVFDVSFMSG 1200
Query: 1203 VKI--RCSESRGYRMPAQAMINLS 1224
+ RCS RG +P +++NL+
Sbjct: 1201 STLGDRCSPFRGMTVPYSSVLNLT 1224
>gi|357512203|ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355501405|gb|AES82608.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 956
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 262/723 (36%), Positives = 370/723 (51%), Gaps = 152/723 (21%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIP--------------------EFDNLYLDMNGI 39
MGVP F+R++++RYP + +VV E P EFDNLYLDMNGI
Sbjct: 1 MGVPAFYRWLADRYPRSIVDVVEEAPSPSVAGGPPFPVDVSRPNPNGMEFDNLYLDMNGI 60
Query: 40 IHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
IH C HP D P T +F+ +F YI+ LF +++P+KL ++AIDGVAPRAKMNQQR
Sbjct: 61 IHPCFHP-DGKPA-PATYDDVFKSMFDYIDHLFSLVRPRKLLYLAIDGVAPRAKMNQQRS 118
Query: 100 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQR 159
RRFR+AK+A E + + RL E
Sbjct: 119 RRFRAAKDAAEAEAEEE----RLRNE---------------------------------- 140
Query: 160 GRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTD 219
A + E+L K K + DSN ITPGTPFM L L+Y+++ ++ +
Sbjct: 141 -----FADQIELLTSKEKTETH--------DSNVITPGTPFMAVLSVALQYYIQTRLNYN 187
Query: 220 KLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADL 279
W++T V+LS PGEGEHKIMDYIR ++ P ++PN RHCLYGLDADL
Sbjct: 188 PGWRNT---------KVMLSDSNVPGEGEHKIMDYIRLQRNLPGFDPNTRHCLYGLDADL 238
Query: 280 IMLGLCTHEPYFSLLREEVKFNTKSNK------------------GGSQIVTP------E 315
IML L THE +FS+LRE + F + K G + + P
Sbjct: 239 IMLSLATHEIHFSILREVITFPGQQEKCYMCGQVGHLAAECRGKPGDNALDWPVDDTPIH 298
Query: 316 ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
+ K+ LH+ ++R+YL+ E P F E I+DD+V + F +GNDF+P++P L
Sbjct: 299 KKKYQFLHIWVLREYLQYELLIPDPP----FEIDFERIVDDFVFLCFFVGNDFLPHMPTL 354
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQY 435
I GA+ LL +Y++ + GY+ + G + L+R E F+ +A + EQ +K IQ
Sbjct: 355 EIREGAVNLLMHIYRKEFTAMGGYLTDAGEVFLERVENFIQCVAVHE-EQIFQKRVRIQ- 412
Query: 436 LEGKMGKKFSDVFHKEKSKEM--DPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDED 493
++F++ EM +P + + K L Y E YY++
Sbjct: 413 ----QSQEFNEGMRARARGEMPEEPRASVVDKVK-----------LGQPGYTERYYAE-- 455
Query: 494 EEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSW 553
+FG + K D VL+ Y+ + W YYY G SW W
Sbjct: 456 ---------KFGASDPEIERIKKDI------VLK-----YVEGLCWVCRYYYQGVCSWQW 495
Query: 554 YYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENS 613
YYP+HYAP+ SD+KD + L + + MGEPF PF QL+ LP++S LPE Y++LM +S
Sbjct: 496 YYPYHYAPFASDLKDLADLEITFFMGEPFRPFDQLMGTLPSSSSSALPERYRDLMINPSS 555
Query: 614 PILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPML 673
PIL++YP +F D+NGKK W+ V +PFIDE KL+ A +E LT+EE+ RN L
Sbjct: 556 PILQFYPSDFEIDMNGKKYSWQGVAKLPFIDEKKLLSATRTLEGTLTEEEQLRNSKMLDL 615
Query: 674 VYT 676
+Y
Sbjct: 616 LYV 618
>gi|29126940|gb|AAH48104.1| XRN1 protein [Homo sapiens]
Length = 459
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/314 (62%), Positives = 239/314 (76%), Gaps = 14/314 (4%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
SNCITPGT FM +LH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHK
Sbjct: 130 SNCITPGTEFMAKLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHK 180
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IM++IR K+KPD++PN RHCLYGLDADLIMLGL +HE +FSLLREEV+F K + +
Sbjct: 181 IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQ---R 237
Query: 311 IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP
Sbjct: 238 VCAPEETTFHLLHLSLMREYIDYEFSVLKEK--ITFKYDIERIIDDWILMGFLVGNDFIP 295
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E +
Sbjct: 296 HLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVF 355
Query: 431 ADIQYLEGKMGKKF 444
D+++ E K+G K+
Sbjct: 356 VDLKWFESKVGNKY 369
Score = 230 bits (586), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|242037819|ref|XP_002466304.1| hypothetical protein SORBIDRAFT_01g005340 [Sorghum bicolor]
gi|241920158|gb|EER93302.1| hypothetical protein SORBIDRAFT_01g005340 [Sorghum bicolor]
Length = 990
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 253/709 (35%), Positives = 366/709 (51%), Gaps = 145/709 (20%)
Query: 1 MGVPKFFRYISERYPCLSE---------------VVREYQIP-----EFDNLYLDMNGII 40
MGVP F+R++++RYP V + + P EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP T ++F+ IF+YI+ LF +++P+KL +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCFHPEGRPAP--TTYDEVFKSIFYYIDHLFGLVRPRKLLYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AK+A + + K F+
Sbjct: 119 RFRAAKDAADAAAEEER------LRKEFE------------------------------- 141
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
E L QK K + DSN ITPGT FM L L+Y+++L++
Sbjct: 142 ------AEGRTLAQKEKSEA--------IDSNVITPGTQFMFVLSTALQYYIQLRLN--- 184
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
TL W+ V +ILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLI
Sbjct: 185 ---HTLG---WQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNK---------------GGSQ----IVTP--EETKF 319
ML L THE +FS+LRE + + K G SQ + P + K+
Sbjct: 239 MLALATHEVHFSILREVISMPGQQEKCFLCGQAGHLAAECRGPSQPDNSVELPPIHKKKY 298
Query: 320 FLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN 379
L++ ++R+YL + + P F + E +IDD+V M F +GNDF+P++P L I
Sbjct: 299 QFLNIWVLREYLAKDLEIVDAP----FKINFERLIDDFVFMCFFVGNDFLPHMPTLEIRE 354
Query: 380 GALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGK 439
GA+ LL +Y+ ++ GY+ +GG + L R E F+ +A + EQ +K A IQ + +
Sbjct: 355 GAINLLMSIYRSEFTSMGGYLTDGGEVILDRVEHFIQSVA-VNEEQIFQKRARIQ--QAR 411
Query: 440 MGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTN 499
+ +E S+E + Y D + L Y E YY+++
Sbjct: 412 ENNEEKHRIQRENSEE-------------NQYVDKVK--LGEPGYRERYYAEK------- 449
Query: 500 FFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHY 559
F E + +K ++V RD + Y+ + W + YYY G SW W+YP+HY
Sbjct: 450 -FKEEAE------------SKPIDQVRRDVVQKYVEGLCWVMRYYYQGVCSWQWFYPYHY 496
Query: 560 APYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYY 619
AP+ SD+K + L + + +G+PF PF QL+ LPAAS LP+ Y +LMT +SP+ +Y
Sbjct: 497 APFASDLKGLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMTDPDSPLKSFY 556
Query: 620 PEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
P++F D+NGK+ W+ + +PFIDE++L+ +E LT+EER RNR
Sbjct: 557 PKDFEIDMNGKRFAWQGIAKLPFIDEMRLLAETRKLEDSLTEEERFRNR 605
>gi|115437844|ref|XP_001217914.1| hypothetical protein ATEG_09292 [Aspergillus terreus NIH2624]
gi|114188729|gb|EAU30429.1| hypothetical protein ATEG_09292 [Aspergillus terreus NIH2624]
Length = 1413
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/441 (48%), Positives = 284/441 (64%), Gaps = 77/441 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S ++ E +IPEFDNLYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENRIPEFDNLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I + PKKLFFMA+DGVAPRAKMNQQR RRFR+A +AEV ++KA
Sbjct: 65 -------FNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRARRFRTALDAEVAKEKAIA 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YF+ KI+ DK W+ V ++L
Sbjct: 118 QGVEMPKEDAFDSNCITPGTEFMAKLTEQLKYFISKKISEDK---------DWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR+ K++P Y+PN+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F + K ++ E F+LLHLS++R+YLELEF +L++ G L FPF +E +IDD++
Sbjct: 229 TFGRQVQKKPKEL---EHQNFYLLHLSMVREYLELEFQELEQEGALKFPFDMERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL L++K+Y+E+LP + GYINE G +NL+R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALALMFKIYKEILPKMGGYINEQGVINLERLGVLLDGL 345
Query: 419 ASFDFEQFREKYADIQYLEGK 439
+ +F F +Y+D ++++ K
Sbjct: 346 SDVEFRFFEAEYSDARWIKAK 366
Score = 339 bits (869), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 243/750 (32%), Positives = 382/750 (50%), Gaps = 45/750 (6%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K YY K D+ E +R E Y++ +QW L YYY G SW W++ +HYAP
Sbjct: 504 KFQEWKDKYYTSKFDWGLENAEEMRKLTENYVQGLQWVLFYYYRGIASWPWFFGYHYAPM 563
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K ++ + +G+PF P++QL+ VLP SK+++P Y++LMT SPI+++YP +
Sbjct: 564 ISDVKKGLKADMNFRLGQPFRPYEQLMGVLPDRSKKIVPPAYRDLMTSPESPIIDFYPRD 623
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NVN 681
F D+NGKK +WEAVV IPFIDE +L+ A+ EHLLT +E++RN G L +TYS V
Sbjct: 624 FELDMNGKKMEWEAVVKIPFIDEKRLLDALKTREHLLTPDEKARNGFGASLKFTYSPEVQ 683
Query: 682 -LGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQDVNLKL-YVTHFPT 735
+ + P FP I H +E +I+ P + GL V L + FP+
Sbjct: 684 YVYPSSLPGVFPDIPNCHCIE------NIFDLPTMDGLEPYIGLVDGVQLGASALAGFPS 737
Query: 736 LKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIE 795
LK + ++ V VFQQ SRNES+++ + S ++A LG+ +++ YP L E
Sbjct: 738 LKTLPHVGQLGFHGVCVFQQESRNESMVVTILEPGSRSSVELAKAKLGQRVYVGYPFLQE 797
Query: 796 IRVQAVATKDSRISFDKNSGPVFERAAKDMQ---DAFQLSKKSITDGYYTKLGVDIGNTE 852
V V D + K G + + D ++ I Y +LG+ IG+ E
Sbjct: 798 ALV--VRVSDELFDYIKPEGQQHIASIPHTEAQIDQWKKKADKIEGIYSRRLGMIIGSVE 855
Query: 853 VLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESL---EYKTID 908
+V+ QP+ + G ++ I T YA Q V + E + I+
Sbjct: 856 SMVHVQPL--KGLLKTDEGASVKEFADIPGQETDYALQMVVDEVINPDERFIERDALPIE 913
Query: 909 EIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQDDTVYN 967
+ F G + F L + +YG V T ++ L V+ +EP+ + +
Sbjct: 914 KEFPEGSRAFFLGDFNYGR--PVHITGHDDGKVNGLIAAVKGREPEFGKERARNAEKLSP 971
Query: 968 YLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRD 1027
Y+PSY +A L ++PL+L++ T S F +D EG+ R N+GLN+KF K ++V+G++RR
Sbjct: 972 YMPSYAIARSLRLNPLVLAKITSS-FSVDI--EGS-RVNLGLNLKFEAKKQKVLGYSRRG 1027
Query: 1028 ETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSW 1086
E+ W ++ + V L++ YM +FP+ ++ + D Y D +P ++ +I W
Sbjct: 1028 ESG--WEFSSKAVDLLQQYMIRFPDFIAGIQRNPQKDRYTPTDFYPEDIAMVKMKEIRDW 1085
Query: 1087 LKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEK----VEKQITLFVKPNKLYIPKPT 1142
LK E P A +D+ VV LIE D + ++ + V L P
Sbjct: 1086 LKSIEAKNFERVPLEAEQLDSDVVKLIEQDADQLIQNMPPMQPKKIRGVPRGALLRPADV 1145
Query: 1143 LDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHG 1202
+L + FKL DRVV +D VP+ RGT++G+ + TS + DVVFD F G
Sbjct: 1146 EQRLG---NQTFKLGDRVVYAQDSGKVPIATRGTVVGLTR--TSRAVLLDVVFDASFMSG 1200
Query: 1203 VKI--RCSESRGYRMPAQAMINLSYGERLC 1230
+ RCS RG + A +++N+SY + L
Sbjct: 1201 TTLGDRCSPFRGQTVLASSVLNVSYRQLLA 1230
>gi|407853365|gb|EKG06397.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 1646
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 297/970 (30%), Positives = 471/970 (48%), Gaps = 138/970 (14%)
Query: 125 EKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLP 184
EK F+ I P+K FF+A+DGVAPRAKMNQQR RR+RS E V Q+A +GE +P
Sbjct: 274 EKLFNVIQ-----PRKYFFLAVDGVAPRAKMNQQRQRRYRSGYELMVARQEAIAQGEEVP 328
Query: 185 TEKR-FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHET 243
EK FDSNCITPGT FM R+ +Q +YF+ +KI TD W++ V+ SGH+
Sbjct: 329 DEKDVFDSNCITPGTNFMVRVSEQFQYFITMKIATDP---------AWQNCQVVYSGHDN 379
Query: 244 PGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF--N 301
PGEGEHKI+D+IR K +P Y+PN HC+YGLDADL+ML L THEP+F LLRE V F
Sbjct: 380 PGEGEHKIVDFIRRRKMQPGYSPNETHCMYGLDADLVMLSLATHEPHFLLLREVVTFGPG 439
Query: 302 TKSNKGGSQ--------IVTPEETK----FFLLHLSLMRDYLELEFGKLKEPGVLSFPFS 349
+S + Q I+ + + F L H++++RDYL+L+ + K + +
Sbjct: 440 QESRRAREQREEDEANGIIADKSYRKADEFVLFHVNVLRDYLDLDV-RDKLGAKMPACYD 498
Query: 350 IENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLK 409
++ ++DD+VLM F IGNDF+P +P L I +G+L + +Y + + Y+ G +N +
Sbjct: 499 LDRVLDDFVLMCFFIGNDFLPTIPTLGIHDGSLLQMLDLYCKCILVEGMYLTNQGQINWR 558
Query: 410 RFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDP--DLAALIKAT 467
E +L + + + + + + K+ ++ DP + AA+ A
Sbjct: 559 AVELWLQGIGELELTTIKARQQQEEEYQRKVARR-------------DPTHETAAITSAP 605
Query: 468 DDDYDDGTEEVLNYANYEEYYYSDE---DEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNE 524
+ + Y+E +Y ++ D W G+ D +
Sbjct: 606 ----------IESIREYKERFYREKHGFDNGWDPQ-----GKEMADLRLH---------- 640
Query: 525 VLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEM--GEPF 582
Y+ + W + YYY G SW W++PHHYAP SD+ + + + E +PF
Sbjct: 641 --------YVEGLTWVMGYYYQGPPSWKWFFPHHYAPMASDLVNLPAIAARVEFDPSKPF 692
Query: 583 LPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPF 642
LP QQLLAVLP S +P Y LM + SP+ ++PE D G + WE +VLIPF
Sbjct: 693 LPHQQLLAVLPPMSYRSMPRAYWPLMLSDKSPLKRFFPEILKIDREGARAPWEGIVLIPF 752
Query: 643 IDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEK 702
I+E L+ A +V++ L E+ NR GP ++ Y + +AP P +++
Sbjct: 753 IEERVLLAAYQSVQNKLGPEDEVHNRLGPATLFAYD-----SDMAPCDVP-----NSMFG 802
Query: 703 PL----YRDDIYVHP--NKLRKGLCQDVNL-KLYVTHFPTLKHVQ--FTHKIENAKVKVF 753
PL R ++ P LC V + + + F TL+ + E V +F
Sbjct: 803 PLRNVRVRRQVFEFPPIKTFVPRLCPGVAIGEKQLEGFATLRSNWDCIDLRRETGVVTIF 862
Query: 754 QQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDK 812
P+R ESII+ +++ + S + A ++G+ + + +PH RV +++ D RIS
Sbjct: 863 GMPTRKESIILALRNSINYTSATE-AVSLVGQEVLVGFPHYRRARVTSIS--DKRISVRA 919
Query: 813 ---NSGPVFERAAKDMQ--DAFQLSKKSITDGYYT--KLGVDIGNTEVLVYGQPVESRKY 865
G K++ D+ +K+ T Y KLG+ + ++LVY + +
Sbjct: 920 VMTQDGAFCGTETKELNRDDSLNFTKECDTHIQYMKEKLGIAVDGIQLLVYVNLFSTMR- 978
Query: 866 FFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQAR--ESLEYKTID----------EIFYP 913
+G++ R+F + V YA Q V LQ E L Y D ++ +
Sbjct: 979 -LTRKGRIV--RSFSKDEVCYAMQ-LVARLQDVDMIEDLRYVERDRVEGEMSLGNKVVFI 1034
Query: 914 GCQCFALSNPH--YGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPS 971
G + +P YGS G V + + ++ ++ QEP + L N++
Sbjct: 1035 GPEPKNKKSPMQVYGSAGLVFESASSNSDIYAVAVRLYQEPLVIPPSLLSFAAPRNWMAL 1094
Query: 972 YTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRR-DETT 1030
+ VA++LS+ L L GS + +T + R +GL + ++R + +G+ + T
Sbjct: 1095 HEVATELSVGSLALRLLVGS---LRTTPQYGSRE-LGLGLIYARNHLARIGYAKLVPRQT 1150
Query: 1031 KKWF-YTEQV 1039
W Y+E V
Sbjct: 1151 NAWTPYSEDV 1160
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/127 (56%), Positives = 91/127 (71%), Gaps = 2/127 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEKQ 59
MGVPKFFR+++ER P + R+ P DNLYLDMNGIIHNC+H ND D + TEK
Sbjct: 206 MGVPKFFRWVAERCPTVITPFRDSP-PPVDNLYLDMNGIIHNCTHTNDVDATQKSPTEKA 264
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ + +F Y+E LF +IQP+K FF+A+DGVAPRAKMNQQR RR+RS E V Q+A +G
Sbjct: 265 MMEAMFAYLEKLFNVIQPRKYFFLAVDGVAPRAKMNQQRQRRYRSGYELMVARQEAIAQG 324
Query: 120 ERLPTEK 126
E +P EK
Sbjct: 325 EEVPDEK 331
>gi|303319605|ref|XP_003069802.1| exonuclease, putative [Coccidioides posadasii C735 delta SOWgp]
gi|240109488|gb|EER27657.1| exonuclease, putative [Coccidioides posadasii C735 delta SOWgp]
gi|320040722|gb|EFW22655.1| exonuclease [Coccidioides posadasii str. Silveira]
Length = 1445
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/444 (48%), Positives = 282/444 (63%), Gaps = 77/444 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PKKLFFMAIDGVAPRAKMNQQR RRFR+A +AE+ ++KA
Sbjct: 65 -------FNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTALDAEIAKEKAIR 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YF+ K++ D W+ V VIL
Sbjct: 118 EGIEMPKEDPFDSNCITPGTEFMAKLTKQLKYFINKKVSEDA---------KWQGVEVIL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++PDY+PN+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQAKAQPDYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F ++ K ++ E F+LLHL ++R+YLELEF +L++ G L F F +E +IDD++
Sbjct: 229 TFGRQNQKKVKEL---EHQNFYLLHLCIVREYLELEFQELEQEGALQFEFDMERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++KVY+EVLP LDGYINE G +NL R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAWMFKVYKEVLPKLDGYINERGRINLNRLGVLLDSL 345
Query: 419 ASFDFEQFREKYADIQYLEGKMGK 442
+F F +Y+D ++L+ K+ +
Sbjct: 346 GDVEFRFFEAEYSDSRWLKSKLSR 369
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 237/777 (30%), Positives = 384/777 (49%), Gaps = 51/777 (6%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K YY K + +E +R E Y++ +QW L+YYY G SW W+Y +HY+P
Sbjct: 510 KFQEWKNKYYEGKFGWGTDNDEEMRKLTENYVQGLQWVLYYYYRGVASWPWFYRYHYSPM 569
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K ++ +++G+PF PFQQL+ VLP SK+++P+ Y LM +SPI+++YP +
Sbjct: 570 ISDVKRGLAADMDFKLGQPFFPFQQLMGVLPDRSKKIVPQAYHELMISPDSPIIDFYPRD 629
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR--------HGPMLV 674
F D+NGKK +WEAVV IPFIDE +L+KAM + EHLLT EE++RN H P +
Sbjct: 630 FELDMNGKKMEWEAVVKIPFIDEDRLLKAMASKEHLLTPEEKARNNFGVTLKFTHSPDIE 689
Query: 675 YTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQDVNLKL-Y 729
+TY + +G FP I H +E ++Y P + GL V L
Sbjct: 690 FTYPSSFVGV------FPDIPRCHCIE------NVYELPTMEGLEPYVGLMDGVKLGTEA 737
Query: 730 VTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFIN 789
+ FP+LK + T ++ V VFQQ SRNES+++ + + S ++A +GK + I
Sbjct: 738 LAGFPSLKTLPHTAQLGFHGVTVFQQESRNESMVVTLTEPESRSRAEIAKSKIGKRVHIG 797
Query: 790 YPHLIEIRVQAVATKD-SRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDI 848
YP L E V V+ + + D V + D ++ I Y +LG+ I
Sbjct: 798 YPFLHEALVVRVSDELFDYVQVDGEEHIVQIPHSPGQIDQWKKKSDRIESNYSKRLGMII 857
Query: 849 GNTEVLVYGQPVESR-KYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESL---EY 904
G E +V+ ++ K G K + I + YA Q V + + E
Sbjct: 858 GEVESIVHVHVLKGLVKTELGATVKEFAEIPGIET--DYASQLIVDEVISQDDRFIEREA 915
Query: 905 KTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDT 964
I+E F G + F L +YG+ + + + + K +EP+ + ++
Sbjct: 916 VPIEEEFPEGTRAFFLGEYNYGAPVHITGHDDGKLQGLVSTTKGAKEPEFGKEQVVIAES 975
Query: 965 VYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFT 1024
Y PS+ V+ L ++PL +++ T S ++ KR N+GLN+KF K +V+G++
Sbjct: 976 HSPYTPSFAVSRNLQLNPLTVAKITSSFSVMSE----GKRINLGLNLKFEAKKLKVLGYS 1031
Query: 1025 RRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQI 1083
RR + W ++E+ + L++ YM +FPE ++ D++ D +P + ++ +I
Sbjct: 1032 RRGQNG--WEFSEKAIGLLREYMIKFPEFIAGIQRKPQGDLFEPTDFYPPEVAATKIKEI 1089
Query: 1084 VSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE----KQITLFVKPNKLYIP 1139
SWLK E P A +D+ VV IE A D + + Q V N + P
Sbjct: 1090 QSWLKSIEAKNFERVPLEAEQLDSDVVGAIEEAADKWFRNKPSPIPQKIRGVPRNAVLKP 1149
Query: 1140 KPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPF 1199
+L + +F L DRV+ +D VP+ +GT++G+ + TS + DV+FD F
Sbjct: 1150 ADAEHRLG---NQRFALGDRVIYAQDSGKVPIATKGTVVGLTR--TSRTVLLDVIFDVSF 1204
Query: 1200 PHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPHVKNINVMQSRGERNTNYA 1254
G + RCS RG + A +++NL+ ++L + + Q R N Y
Sbjct: 1205 MSGTTLSGRCSPFRGQTVAASSVLNLT-NKQLVAMTRAANEQAKAQQQRTSANQGYG 1260
>gi|359490022|ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
Length = 834
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 254/735 (34%), Positives = 363/735 (49%), Gaps = 144/735 (19%)
Query: 1 MGVPKFFRYISERYPCLS--------EVVREYQIP-----------EFDNLYLDMNGIIH 41
MG+P F+R++++RYP VV + EFDNLYLDMNGIIH
Sbjct: 1 MGIPAFYRWLADRYPLAVVNAVEDRPAVVNGVSVAVDTTRPNPNGNEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP + P + T +F+ +F YI+ +F +++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHP-EGLPAPK-TYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FR+AKEA + TE+ LK F ++ +A+
Sbjct: 119 FRAAKEAA---------DDASGTER------LKTVFESEMEMLAL--------------- 148
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
L K+ DSN ITPGT FM L L+Y++ L++ D
Sbjct: 149 ---------------------LDQTKKLDSNVITPGTEFMALLSSALKYYIHLRMNLDP- 186
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + VILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLIM
Sbjct: 187 --------GWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 238
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNK----------------------GGSQIVT-PEETK 318
L L THE +FS+LRE+V + +K GG I K
Sbjct: 239 LALATHEIHFSILREDVHKAYRKDKNNKPRKDSLLVNKRGKSKQGEVGGEDIEDFISRQK 298
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
F L++ +RDYL + S +E +IDD+V M +GNDF+P++P L I
Sbjct: 299 FQFLNIWTLRDYLAHDMSIPDR----SLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEIS 354
Query: 379 NGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEG 438
GA+ LL VY++ + GY+ + L+R E+F+ + S + FR++ ++
Sbjct: 355 EGAIDLLMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKR----SQVQK 410
Query: 439 KMGKKFSDVFHKE-------------------KSKEMDPDLAALIK----ATDDDYDDGT 475
K G +F +K+ ++P + +T + T
Sbjct: 411 KRGVRFQGSSNKKTVSDYSTTPCVEPQGMTGSSGSSLEPRKTPFCQDSKNSTVKEIQCST 470
Query: 476 EEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIR 535
+ AN ++ W+ F+ E + KT+ V R YI
Sbjct: 471 NCISTGANSLVDKIKLGEDGWKERFYVEKFEAKTE---------DDRERVRRHAVLKYIE 521
Query: 536 AIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAA 595
I W +HYYY G SW W+YP+HYAP+ SDI L++++ +G+PF PF QL+ VLPAA
Sbjct: 522 GICWVMHYYYQGVCSWQWFYPYHYAPFASDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAA 581
Query: 596 SKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
S LP Y+ LM E SPIL++YP +F D+NGK+ W+A+ +PFI E +L+ + V
Sbjct: 582 SAHALPLYYRKLMMDETSPILDFYPADFELDMNGKRYPWQAICKLPFIKESRLLAEIAKV 641
Query: 656 EHLLTDEERSRNRHG 670
E LTD+E+ RNR G
Sbjct: 642 ESTLTDKEKLRNRLG 656
>gi|358371673|dbj|GAA88280.1| exonuclease Kem1 [Aspergillus kawachii IFO 4308]
Length = 1405
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/443 (48%), Positives = 282/443 (63%), Gaps = 77/443 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S ++ E +IPEFDNLYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENRIPEFDNLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I + PKKLFFMA+DGVAPRAKMNQQR RRFR+A +AE ++KA
Sbjct: 65 -------FNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRARRFRTALDAETAKEKAIA 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E+ FDSNCITPGT FM +L +QL+YF+ KI+ DK W+ V ++L
Sbjct: 118 QGIEMPKEEAFDSNCITPGTEFMAKLTEQLKYFINKKISEDK---------DWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR+ K++P Y+PN+RHCLYGLDADLIMLGL +H+P+FSLLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRHAKAQPLYDPNVRHCLYGLDADLIMLGLLSHDPHFSLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F + K ++ E FFLLHL ++R+YLELEF +L++ GVLSFPF +E +IDD++
Sbjct: 229 TFGRQVQKKSKEL---EHQNFFLLHLCMVREYLELEFQELEQEGVLSFPFDMEKVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++K+Y+E LP + GYINE G + + R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAFMFKIYKESLPKMGGYINEQGVIKMDRLGILLDAL 345
Query: 419 ASFDFEQFREKYADIQYLEGKMG 441
+ +F F +Y+D Q++ K G
Sbjct: 346 SDVEFRFFEHEYSDAQWIRAKKG 368
Score = 337 bits (863), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 234/743 (31%), Positives = 382/743 (51%), Gaps = 39/743 (5%)
Query: 502 SEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAP 561
++F + K +YY K + ++E +R+ E Y++ +QW L+YYY G SW W++ +HYAP
Sbjct: 500 AKFQEWKNNYYVGKFGWGLDSHEEMRELTENYVQGLQWVLYYYYRGIASWPWFFKYHYAP 559
Query: 562 YISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
ISD+K + + + +G+PF P++QL+ VLP SK+ +P Y++LMT +SPI+++YP
Sbjct: 560 MISDVKKGLNADTNFRLGKPFRPYEQLMGVLPDRSKKTVPAAYRDLMTSPDSPIIDFYPR 619
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NV 680
+F D+NGKK +WEAVV IPFI+E +L+ A+ EHLLT EE++RN G L +TYS V
Sbjct: 620 DFELDMNGKKMEWEAVVKIPFIEERRLLDALATREHLLTPEEKARNGFGASLKFTYSPEV 679
Query: 681 N-LGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQDVNL-KLYVTHFP 734
+ + P FP I H +E +I+ P + GL V + + FP
Sbjct: 680 QFIYPSSLPGVFPDIPNCHCIE------NIFDLPTMDGLEPYIGLMDGVQMGAAALAGFP 733
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLI 794
+L+ + ++ + V VFQQ SRNES++I S ++A Q LG+ + + YP L
Sbjct: 734 SLQTLPHVGQLGHHGVTVFQQESRNESMVITLLDPGSRSSVELAKQKLGQRVHVGYPFLQ 793
Query: 795 EIRVQAVATKDSRISFDKNSGPVFERAAKDMQ-DAFQLSKKSITDGYYTKLGVDIGNTEV 853
E V V+ + + +G V Q D ++ + I Y +LG IG E
Sbjct: 794 EALVIRVSDELFDYILPEPTGHVVSIPHTPAQIDQWKRKAERIESSYSKRLGTIIGPVES 853
Query: 854 LVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSA---VLNLQQARESLEYKTIDE 909
+V+ Q ++ G ++ I T YA Q V+N Q E I+E
Sbjct: 854 MVHVQLLKG--LIKTDEGATVKEFADIPGQETDYALQLVVDDVINPDQRFIEREALPIEE 911
Query: 910 IFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYL 969
F + F L +YG + + + + + KV +EP+ + + Y+
Sbjct: 912 EFPENSRAFMLGEYNYGRPVQITGHDHGKVNGMIAAVKV-REPEFGRDRARDAEKLCPYM 970
Query: 970 PSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDET 1029
PSY +A L ++PL+L++ T S S + +R N+GLN+KF + ++V+G++RR ++
Sbjct: 971 PSYAIARSLRLNPLVLAKITSSF----SVDVEGQRVNLGLNLKFEARKQKVLGYSRRGDS 1026
Query: 1030 TKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWLK 1088
W ++ + V L++ YM +FPE ++ + +D Y D +P + ++ +I WLK
Sbjct: 1027 G--WEFSPKAVELLQQYMIKFPEFIAGIQRNPQNDRYTPTDFYPEETALLKMKEIRDWLK 1084
Query: 1089 EQPHAKAEVRPCGAAVVDAKVVSLIEHAVD----TCEKVEKQITLFVKPNKLYIPKPTLD 1144
E P A +D+ +V LIE D + +E + + + L P
Sbjct: 1085 SIEAKNFERVPLDAEQLDSDLVKLIEQDADQLLQSMPPMEVKAVRGLPRSALLRPSDVEQ 1144
Query: 1145 KLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVK 1204
+L + FKL DRVV +D VP+ RGT++G+ + T + DVVFD F G
Sbjct: 1145 RLG---NQTFKLGDRVVYAQDSGKVPIATRGTVVGLTR--TPRALLLDVVFDVSFMSGTT 1199
Query: 1205 I--RCSESRGYRMPAQAMINLSY 1225
+ RCS RG + A +++N+SY
Sbjct: 1200 LGDRCSPFRGQTVLASSVLNVSY 1222
>gi|119183089|ref|XP_001242618.1| hypothetical protein CIMG_06514 [Coccidioides immitis RS]
gi|392865522|gb|EAS31317.2| exonuclease Kem1 [Coccidioides immitis RS]
Length = 1445
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/444 (48%), Positives = 282/444 (63%), Gaps = 77/444 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PKKLFFMAIDGVAPRAKMNQQR RRFR+A +AE+ ++KA
Sbjct: 65 -------FNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTALDAEIAKEKAIR 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YF+ K++ D W+ V VIL
Sbjct: 118 EGIEMPKEDPFDSNCITPGTEFMAKLTKQLKYFINKKVSEDA---------EWQGVEVIL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++PDY+PN+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQAKAQPDYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F ++ K ++ E F+LLHL ++R+YLELEF +L++ G L F F +E +IDD++
Sbjct: 229 TFGRQNQKKVKEL---EHQNFYLLHLCIVREYLELEFQELEQEGALQFEFDMERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++KVY+EVLP LDGYINE G +NL R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAWMFKVYKEVLPKLDGYINERGRINLNRLGVLLDSL 345
Query: 419 ASFDFEQFREKYADIQYLEGKMGK 442
+F F +Y+D ++L+ K+ +
Sbjct: 346 GDVEFRFFEAEYSDSRWLKSKLSR 369
Score = 335 bits (860), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 236/777 (30%), Positives = 382/777 (49%), Gaps = 51/777 (6%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K YY K + +E +R E Y++ +QW L+YYY G SW W+Y +HY+P
Sbjct: 510 KFQEWKNKYYEGKFGWGTDNDEEMRKLTENYVQGLQWVLYYYYRGVASWPWFYRYHYSPM 569
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K ++ +++G+PF PFQQL+ VLP SK+++P+ Y LM +SPI+++YP +
Sbjct: 570 ISDVKRGLGADMDFKLGQPFFPFQQLMGVLPDRSKKIVPQAYHELMISPDSPIIDFYPRD 629
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR--------HGPMLV 674
F D+NGKK +WEAVV IPFI+E +L+KAM + EHLLT EE++RN H P +
Sbjct: 630 FELDMNGKKMEWEAVVKIPFINEDRLLKAMASKEHLLTPEEKARNNFGVTLKFTHSPDIE 689
Query: 675 YTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQDVNLKL-Y 729
+TY + +G FP I H +E ++Y P + GL V L
Sbjct: 690 FTYPSSFVGV------FPDIPRCHCIE------NVYELPTMEGLEPYVGLMDGVKLGTEA 737
Query: 730 VTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFIN 789
+ FP+LK + T ++ V VFQQ SRNES+++ + + S + A +GK + I
Sbjct: 738 LAGFPSLKTLPHTAQLGFHGVTVFQQESRNESMVVTLTEPESRSRVETAKSKIGKRVHIG 797
Query: 790 YPHLIEIRVQAVATKD-SRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDI 848
YP L E V V+ + + D V + D ++ I Y +LG+ I
Sbjct: 798 YPFLHEALVVRVSDELFDYVQVDGEEHIVQIPHSPGQIDQWKKKSDRIESSYSKRLGMII 857
Query: 849 GNTEVLVYGQPVESR-KYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESL---EY 904
G E +V+ ++ K G K + I + YA Q V + + E
Sbjct: 858 GEVESIVHVHVLKGLVKTELGATVKEFAEIPGIET--DYASQLIVDEVISQDDRFIEREA 915
Query: 905 KTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDT 964
I+E F G + F L +YG+ + + + + K +EP+ ++
Sbjct: 916 VPIEEEFPEGTRAFFLGEYNYGAPVHITGHDDGKLQGLVSTTKGAKEPEFGKEQVDIAES 975
Query: 965 VYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFT 1024
Y PS+ V+ L ++PL +++ T S ++ KR N+GLN+KF K +V+G++
Sbjct: 976 HSPYTPSFAVSRNLQLNPLTVAKITSSFSVMCE----GKRINLGLNLKFEAKKLKVLGYS 1031
Query: 1025 RRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQI 1083
RR + W ++E+ + L++ YM +FPE ++ D++ D +P + ++ +I
Sbjct: 1032 RRGQNG--WEFSEKAIGLLREYMIKFPEFIAGIQRKPQGDLFEPTDFYPPEVAATKIKEI 1089
Query: 1084 VSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE----KQITLFVKPNKLYIP 1139
SWLK E P A +D+ VV IE A D + + Q V N + P
Sbjct: 1090 QSWLKSNEAKNFERVPLEAEQLDSDVVGAIEEAADKWFRNKPSPIPQKIRGVPRNAVLKP 1149
Query: 1140 KPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPF 1199
+L + +F L DRV+ +D VP+ +GT++G+ + TS + DV+FD F
Sbjct: 1150 ADAEHRLG---NQRFALGDRVIYAQDSGKVPIATKGTVVGLTR--TSRTVLLDVIFDVSF 1204
Query: 1200 PHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPHVKNINVMQSRGERNTNYA 1254
G + RCS RG + A +++NL+ ++L + + Q R N Y
Sbjct: 1205 MSGTTLSGRCSPFRGQTVAASSVLNLT-NKQLVAMTRAANEQAKAQQQRTSANQGYG 1260
>gi|67902396|ref|XP_681454.1| hypothetical protein AN8185.2 [Aspergillus nidulans FGSC A4]
gi|40740017|gb|EAA59207.1| hypothetical protein AN8185.2 [Aspergillus nidulans FGSC A4]
Length = 1699
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/470 (46%), Positives = 292/470 (62%), Gaps = 78/470 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S ++ E +IPEFDNLYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENRIPEFDNLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I + PKKLFFMA+DGVAPRAKMNQQR RRFR+A +AE ++KA
Sbjct: 65 -------FNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRARRFRTALDAEQAKEKAIA 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YF+ KI+ DK W+ V ++L
Sbjct: 118 QGIEMPKEDPFDSNCITPGTEFMAKLTEQLKYFISKKISEDK---------DWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR+ K++P Y+PN+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F + K ++ E F+LLHL ++R+YL+LEF +L+E G++ FP+ E +IDD++
Sbjct: 229 TFGRQVQKKPKEL---EHQNFYLLHLCMVREYLQLEFQELEEEGIIDFPYEFERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL L++KVY+EVLP + GYINE G +NL+R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALSLMFKVYKEVLPKMGGYINEQGTINLQRLGVLLDAL 345
Query: 419 ASFDFEQFREKYADIQYLEGKM-GKKFSDVFHKEKSKEMDPDLAALIKAT 467
+ ++ F +Y+D ++ K +DV K K+ + PD ++K
Sbjct: 346 SHVEYRFFEAEYSDATWMRAKQSADNGADVDAKPKTFTVTPDQKNILKTV 395
Score = 328 bits (840), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 231/739 (31%), Positives = 370/739 (50%), Gaps = 33/739 (4%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F K YY K + +E +R E Y++ +QW L YYY G SW W++ HYAP
Sbjct: 504 KFQDWKDKYYMEKFGWGLDNHEEMRKLTENYVQGLQWVLFYYYRGIASWPWFFNSHYAPM 563
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K + ++ + +G PF P+ QL+ VLP SK+++P+ Y +LM+ +SPI+++YP +
Sbjct: 564 ISDVKKGLNADMNFRLGRPFRPYDQLMGVLPDRSKKIVPKAYHDLMSSPDSPIIDFYPRD 623
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS--NV 680
F D+NGKK +WEAVV IPFIDE +L+ A+ EHLLT EE++RN G L +TYS
Sbjct: 624 FELDMNGKKMEWEAVVKIPFIDERRLLDALATREHLLTPEEKARNGFGVSLKFTYSPDTE 683
Query: 681 NLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKHV 739
+ + P FP I ++ D + + GL + V+L + FP+LK +
Sbjct: 684 YIYPSSLPGVFPDIPNCRCIQNVF--DLPTMDGLEPYVGLVEGVHLGASALAGFPSLKTL 741
Query: 740 QFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQ 799
++ V VFQQ SRNES++I S ++A + LG+ +F+ YP L E V
Sbjct: 742 PHAGQLGFHGVCVFQQESRNESMVITVLDPGSRSSSELAKKKLGQRVFVGYPFLQEALVT 801
Query: 800 AVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYT-KLGVDIGNTEVLVYGQ 858
V+ + + D Q K +G Y+ + G IG E +V+ Q
Sbjct: 802 RVSDELFDYTLPAGEEHPLATPHSDAQIEQWKKKADKIEGIYSRRFGTIIGPVEAMVHVQ 861
Query: 859 PVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQ---SAVLNLQQARESLEYKTIDEIFYPG 914
+ + G ++ I T YA Q V+N + E +++ F G
Sbjct: 862 LL--KGLIKTDSGATVKEFADIPGQETDYALQLVVDEVINPDERFIEREALPVEKEFPEG 919
Query: 915 CQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQDDTVYNYLPSYT 973
+ F L +YG V T ++ L ++ +EP+ + + Y+P++
Sbjct: 920 SRAFFLGEFNYGR--PVHITGHDDGKVNGLIAVIKGREPEFGRERARNAEALSPYMPAFA 977
Query: 974 VASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKW 1033
VA L ++PL L++ T S S + +R N+GLN+KF + ++V+G++RR E+ W
Sbjct: 978 VARILQLNPLTLAKITSSF----SVDVDGQRVNLGLNLKFEARKQKVLGYSRRSESG--W 1031
Query: 1034 FYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWLKEQPH 1092
++ + + L++ YM +FP+ ++ + +D Y D +P ++ +I +WLKE
Sbjct: 1032 EFSAKAIGLVEQYMLKFPQFIAGIQRNPRNDRYQPTDFYPPDIALDKINEIKAWLKEIES 1091
Query: 1093 AKAEVRPCGAAVVDAKVVSLIEHAVDTCEK----VEKQITLFVKPNKLYIPKPTLDKLCP 1148
E P A +D+ VV LIE D K +E + + + L P +L
Sbjct: 1092 KNFERVPLEAEQLDSDVVKLIEQDADQLVKTQPPMEAKKIRDIPRSALLRPADVEHRLG- 1150
Query: 1149 DPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--R 1206
+ FKL DRVV +D VP+ RGT++G+ + T + DVVFD F G + R
Sbjct: 1151 --NQTFKLGDRVVYAQDSGKVPIATRGTVVGLTR--TPRAILLDVVFDVAFMSGTTLGDR 1206
Query: 1207 CSESRGYRMPAQAMINLSY 1225
CS RG + A +++NLSY
Sbjct: 1207 CSPFRGQTVLASSVLNLSY 1225
>gi|328865598|gb|EGG13984.1| 5'-3' exoribonuclease [Dictyostelium fasciculatum]
Length = 1808
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 319/965 (33%), Positives = 486/965 (50%), Gaps = 124/965 (12%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P KL +MAIDGVAPR+K+NQQR RRF S E +++ ++G+ LP E F N ITPG
Sbjct: 275 PTKLLYMAIDGVAPRSKLNQQRQRRFLSVFREEKEKKELIKEGKELP-EVIFSRNAITPG 333
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM L + L++F+K KI+ D LS W+++ +I SG E PGEGEHKI+DYIR
Sbjct: 334 TEFMSNLSECLQFFIKKKISED------LS---WREIEIIFSGPENPGEGEHKIIDYIRK 384
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K+ PD++PN HCLYGLDADLI+L L THEP+FS+LREE+ F ++NK +
Sbjct: 385 YKASPDWDPNQSHCLYGLDADLILLALVTHEPHFSILREEIAFRPQANK---------QL 435
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F LLH+SL+R+Y+ELE L F +S+E IIDD+VL+ GNDF+P+LP I
Sbjct: 436 DFQLLHISLLREYMELEL-----KCELDFGYSLERIIDDFVLVMIFFGNDFLPHLPFCEI 490
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFRE--KYADIQY 435
G L + ++Y+ L L GY+ + ++L R FL K+A F+ +Q + + +
Sbjct: 491 STGGLNSVLELYKNSLNELGGYLTDEAEIDLDRLAVFLAKIAVFERKQNLTVGEAEENEV 550
Query: 436 LEGKMGKKFSDVFHKEKSKEMD-------PDLAALIKATDDDYDDGTEEVLNYANYEEYY 488
+E + + +DV E+ KE++ + I DDD +D + +N Y
Sbjct: 551 VEDMLLE--NDVQDDEEKKEIERRAFERLKNHFGEITFEDDDVEDINDYWIN--GYYRSK 606
Query: 489 YSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGC 548
+ D EE R+ +DY + + VL+ Y+ + W L+YY+NGC
Sbjct: 607 FPDFPEENRSAI---------------VDYKR--HLVLK-----YVEGLSWVLNYYHNGC 644
Query: 549 VSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLM 608
+SW WYYP++YAP D++D S L +++E P PFQQL++VLP S LLP PYQ LM
Sbjct: 645 ISWRWYYPYYYAPLAVDMRDLSSLEIEFESNGPVTPFQQLMSVLPPQSAHLLPAPYQELM 704
Query: 609 TLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHL-LTDEERSRN 667
T SPI+++YP EF D ++ + +I F D +L++A A + LTD+ERSRN
Sbjct: 705 TSAASPIIDFYPTEFEVD-TSDSHYFDGIAVIGFPDLGRLLEATAAEDSWDLTDKERSRN 763
Query: 668 RHGPMLVYTYSNVNLGTALAPD--YFPAINENHAVEK----PLYRDDIYVHPNKLRKGLC 721
++ + + + +P+ FP++ + A + P Y + P + LC
Sbjct: 764 ALRNAVIIYHDAEQVVSEPSPNLRLFPSLEHSSAKTEDFILPFYEG---LKPFR----LC 816
Query: 722 QDVNLKLYV-THFPTLK-HVQFTHKIENAKVKVFQQPSRNESIII-------VQDKVQVP 772
+ V L + + FPT V FT + +NA V ++ SR ESII+ +DK
Sbjct: 817 EGVLLGSHSPSGFPTFAVDVDFTWEYKNAVVNIWGMKSRKESIIVHPPIPQLNKDKTAKQ 876
Query: 773 SLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLS 832
+G+ ++N+P+ E + + + +IS +N QD +
Sbjct: 877 MTLASIKHWIGRRCYVNWPYNTEALIVGFSDSNQKISMLENVSSTNGTVRLTTQDYLAVQ 936
Query: 833 KKSITD-------GYYTKLGVDIG---NTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
K S D Y TK G+D+ + +LV+ + + FG R ++
Sbjct: 937 KVSYLDQLKKIPMDYLTK-GIDVSEVTSNTILVHVRKIAGIDVEFGGRT--------VKR 987
Query: 883 TVTYAYQ---SAVLNLQQARESLEYKTIDEI-----FYPGCQCFALSNPHYGSGGCVIST 934
YQ ++ + R Y +EI F G Q + H+G+ G V+
Sbjct: 988 YTEKEYQLPIQLMVEYDKVRADSRYLETEEIPFATRFPIGKQVLYTNPDHFGAIGKVLGH 1047
Query: 935 VKEENSFIKLSFKVQQE-PDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIF 993
E + L KV Q PDL + + Y P V ++ LS TG +F
Sbjct: 1048 ADESTETLDLELKVGQSGPDLHFGHRVAKEETDEYFPIQHVCKATGLTNQQLSLLTGGLF 1107
Query: 994 IIDSTEEGAKRHNIGLNIKFSRKNEEVVGFT-------RRDETTKKWFYTEQVVTLIKNY 1046
I +IGLN+KF+ +N++++G+ R T KKW ++ + LI +Y
Sbjct: 1108 I------DKPMTDIGLNMKFTGRNQQLMGYCRGTTLGDRNGGTYKKWEFSNDAIQLIMDY 1161
Query: 1047 MKQFP 1051
+K FP
Sbjct: 1162 LKTFP 1166
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 9 YISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYI 68
+ SERYP + + + + PE+DNLYLDMNGIIH CS R +E+++ + + +YI
Sbjct: 208 WASERYPQIIQNLVDSNPPEYDNLYLDMNGIIHACSQEMTTK-LIRFSEEELIRLVCNYI 266
Query: 69 EILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 105
+ LF +I+P KL +MAIDGVAPR+K+NQQR RRF S
Sbjct: 267 DKLFHIIRPTKLLYMAIDGVAPRSKLNQQRQRRFLSV 303
Score = 42.4 bits (98), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 1153 KFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIR--CSES 1210
+F+L DRV+ + D VP G GT++ I D DVV D+ G + CSE
Sbjct: 1322 QFRLGDRVITMLDKGNVPFGLYGTVVSI------QDQKVDVVLDRECFSGNNLEGFCSEK 1375
Query: 1211 RGYRMPAQAMINLS 1224
RG + + NLS
Sbjct: 1376 RGLFISKWRLYNLS 1389
>gi|145242532|ref|XP_001393839.1| exonuclease Kem1 [Aspergillus niger CBS 513.88]
gi|134078390|emb|CAK40380.1| unnamed protein product [Aspergillus niger]
Length = 1406
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/444 (47%), Positives = 283/444 (63%), Gaps = 77/444 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S ++ E +IPEFDNLYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENRIPEFDNLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I + PKKLFFMA+DGVAPRAKMNQQR RRFR+A +AE ++KA
Sbjct: 65 -------FNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRARRFRTALDAETAKEKAIA 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E+ FDSNCITPGT FM +L +QL+YF+ KI+ DK W+ V ++L
Sbjct: 118 QGIEMPKEEAFDSNCITPGTEFMAKLTEQLKYFINKKISEDK---------DWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR+ K++P Y+PN+RHCLYGLDADLIMLGL +H+P+FSLLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRHAKAQPLYDPNVRHCLYGLDADLIMLGLLSHDPHFSLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F + K ++ E F+LLHL ++R+YLELEF +L++ GVLSFPF +E +IDD++
Sbjct: 229 TFGRQVQKKSKEL---EHQNFYLLHLCMVREYLELEFQELEQEGVLSFPFDMEKVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++K+Y+E LP + GYINE G + + R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAFMFKIYKESLPKMGGYINEQGVIKMDRLGILLDAL 345
Query: 419 ASFDFEQFREKYADIQYLEGKMGK 442
+ +F F +Y+D Q++ K G+
Sbjct: 346 SDVEFRFFEHEYSDAQWIRAKKGE 369
Score = 332 bits (852), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 232/742 (31%), Positives = 380/742 (51%), Gaps = 39/742 (5%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K +YY K + ++E +++ E Y++ +QW L+YYY G SW W++ +HYAP
Sbjct: 501 KFQEWKNNYYVGKFGWGLDSHEEMKELTENYVQGLQWVLYYYYRGIASWPWFFKYHYAPM 560
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K + + + +G+PF P++QL+ VLP SK+ +P Y++LMT +SPI+++YP +
Sbjct: 561 ISDVKKGLNADTNFRLGKPFRPYEQLMGVLPDRSKKTVPAAYRDLMTSPDSPIIDFYPRD 620
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NVN 681
F D+NGKK +WEAVV IPFI+E +L+ A+ EHLLT EE++RN G L +TYS V
Sbjct: 621 FELDMNGKKMEWEAVVKIPFIEERRLLDALATREHLLTPEEKARNGFGASLKFTYSPEVQ 680
Query: 682 -LGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQDVNL-KLYVTHFPT 735
+ + P FP I H +E +I+ P + GL V + + FP+
Sbjct: 681 FIYPSSLPGVFPDIPNCHCIE------NIFDLPTMDGLEPYIGLMDGVQMGAAALAGFPS 734
Query: 736 LKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIE 795
L+ + ++ + V VFQQ SRNES++I S ++A Q LG+ + + YP L E
Sbjct: 735 LQTLPHVGQLGHHGVTVFQQESRNESMVITLLDPGSRSSVELAKQKLGQRVHVGYPFLQE 794
Query: 796 IRVQAVATKDSRISFDKNSGPVFERAAKDMQ-DAFQLSKKSITDGYYTKLGVDIGNTEVL 854
V V+ + + +G V Q D ++ + I Y +LG IG E +
Sbjct: 795 ALVIRVSDELFDYILPEPTGHVVSIPHTPAQIDQWKRKAERIESSYSKRLGTIIGPVESM 854
Query: 855 VYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSA---VLNLQQARESLEYKTIDEI 910
V+ Q ++ G ++ I T YA Q V+N Q E I+E
Sbjct: 855 VHVQLLKG--LIKTDEGATVKEFADIPGQETDYALQLVVDDVINPDQRFIEREALPIEEE 912
Query: 911 FYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLP 970
F + F L +YG + + + + + K +EP+ + + Y+P
Sbjct: 913 FPENSRAFMLGEYNYGRPVQITGHDHGKVNGMIAAVK-GREPEFGRDRARDAERLCPYMP 971
Query: 971 SYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETT 1030
SY +A L ++PL+L++ T S S + +R N+GLN+KF + ++V+G++RR ++
Sbjct: 972 SYAIARSLRLNPLVLAKITSSF----SVDVEGQRVNLGLNLKFEARKQKVLGYSRRGDSG 1027
Query: 1031 KKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWLKE 1089
W ++ + V L++ YM +FPE ++ + +D Y D +P + ++ +I WLK
Sbjct: 1028 --WEFSPKAVELLQQYMIKFPEFIAGIQRNPQNDRYTPTDFYPEETALLKMKEIRDWLKS 1085
Query: 1090 QPHAKAEVRPCGAAVVDAKVVSLIEHAVD----TCEKVEKQITLFVKPNKLYIPKPTLDK 1145
E P A +D+ +V LIE D + +E + + + L P +
Sbjct: 1086 IEAKNFERVPLDAEQLDSDLVKLIEQDADQLLQSMPPMEVKAVRGLPRSALLRPSDVEQR 1145
Query: 1146 LCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI 1205
L + FKL DRVV +D VP+ RGT++G+ + T + DVVFD F G +
Sbjct: 1146 LG---NQTFKLGDRVVYAQDSGKVPIATRGTVVGLTR--TPRALLLDVVFDVSFMSGTTL 1200
Query: 1206 --RCSESRGYRMPAQAMINLSY 1225
RCS RG + A +++N+SY
Sbjct: 1201 GDRCSPFRGQTVLASSVLNVSY 1222
>gi|259480959|tpe|CBF74062.1| TPA: exonuclease II (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 1398
Score = 405 bits (1041), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/470 (46%), Positives = 292/470 (62%), Gaps = 78/470 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S ++ E +IPEFDNLYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENRIPEFDNLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I + PKKLFFMA+DGVAPRAKMNQQR RRFR+A +AE ++KA
Sbjct: 65 -------FNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRARRFRTALDAEQAKEKAIA 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YF+ KI+ DK W+ V ++L
Sbjct: 118 QGIEMPKEDPFDSNCITPGTEFMAKLTEQLKYFISKKISEDK---------DWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR+ K++P Y+PN+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F + K ++ E F+LLHL ++R+YL+LEF +L+E G++ FP+ E +IDD++
Sbjct: 229 TFGRQVQKKPKEL---EHQNFYLLHLCMVREYLQLEFQELEEEGIIDFPYEFERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL L++KVY+EVLP + GYINE G +NL+R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALSLMFKVYKEVLPKMGGYINEQGTINLQRLGVLLDAL 345
Query: 419 ASFDFEQFREKYADIQYLEGKM-GKKFSDVFHKEKSKEMDPDLAALIKAT 467
+ ++ F +Y+D ++ K +DV K K+ + PD ++K
Sbjct: 346 SHVEYRFFEAEYSDATWMRAKQSADNGADVDAKPKTFTVTPDQKNILKTV 395
Score = 327 bits (838), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 231/739 (31%), Positives = 370/739 (50%), Gaps = 33/739 (4%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F K YY K + +E +R E Y++ +QW L YYY G SW W++ HYAP
Sbjct: 504 KFQDWKDKYYMEKFGWGLDNHEEMRKLTENYVQGLQWVLFYYYRGIASWPWFFNSHYAPM 563
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K + ++ + +G PF P+ QL+ VLP SK+++P+ Y +LM+ +SPI+++YP +
Sbjct: 564 ISDVKKGLNADMNFRLGRPFRPYDQLMGVLPDRSKKIVPKAYHDLMSSPDSPIIDFYPRD 623
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS--NV 680
F D+NGKK +WEAVV IPFIDE +L+ A+ EHLLT EE++RN G L +TYS
Sbjct: 624 FELDMNGKKMEWEAVVKIPFIDERRLLDALATREHLLTPEEKARNGFGVSLKFTYSPDTE 683
Query: 681 NLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKHV 739
+ + P FP I ++ D + + GL + V+L + FP+LK +
Sbjct: 684 YIYPSSLPGVFPDIPNCRCIQNVF--DLPTMDGLEPYVGLVEGVHLGASALAGFPSLKTL 741
Query: 740 QFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQ 799
++ V VFQQ SRNES++I S ++A + LG+ +F+ YP L E V
Sbjct: 742 PHAGQLGFHGVCVFQQESRNESMVITVLDPGSRSSSELAKKKLGQRVFVGYPFLQEALVT 801
Query: 800 AVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYT-KLGVDIGNTEVLVYGQ 858
V+ + + D Q K +G Y+ + G IG E +V+ Q
Sbjct: 802 RVSDELFDYTLPAGEEHPLATPHSDAQIEQWKKKADKIEGIYSRRFGTIIGPVEAMVHVQ 861
Query: 859 PVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQ---SAVLNLQQARESLEYKTIDEIFYPG 914
++ G ++ I T YA Q V+N + E +++ F G
Sbjct: 862 LLKG--LIKTDSGATVKEFADIPGQETDYALQLVVDEVINPDERFIEREALPVEKEFPEG 919
Query: 915 CQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQDDTVYNYLPSYT 973
+ F L +YG V T ++ L ++ +EP+ + + Y+P++
Sbjct: 920 SRAFFLGEFNYGR--PVHITGHDDGKVNGLIAVIKGREPEFGRERARNAEALSPYMPAFA 977
Query: 974 VASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKW 1033
VA L ++PL L++ T S S + +R N+GLN+KF + ++V+G++RR E+ W
Sbjct: 978 VARILQLNPLTLAKITSSF----SVDVDGQRVNLGLNLKFEARKQKVLGYSRRSESG--W 1031
Query: 1034 FYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWLKEQPH 1092
++ + + L++ YM +FP+ ++ + +D Y D +P ++ +I +WLKE
Sbjct: 1032 EFSAKAIGLVEQYMLKFPQFIAGIQRNPRNDRYQPTDFYPPDIALDKINEIKAWLKEIES 1091
Query: 1093 AKAEVRPCGAAVVDAKVVSLIEHAVDTCEK----VEKQITLFVKPNKLYIPKPTLDKLCP 1148
E P A +D+ VV LIE D K +E + + + L P +L
Sbjct: 1092 KNFERVPLEAEQLDSDVVKLIEQDADQLVKTQPPMEAKKIRDIPRSALLRPADVEHRLG- 1150
Query: 1149 DPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--R 1206
+ FKL DRVV +D VP+ RGT++G+ + T + DVVFD F G + R
Sbjct: 1151 --NQTFKLGDRVVYAQDSGKVPIATRGTVVGLTR--TPRAILLDVVFDVAFMSGTTLGDR 1206
Query: 1207 CSESRGYRMPAQAMINLSY 1225
CS RG + A +++NLSY
Sbjct: 1207 CSPFRGQTVLASSVLNLSY 1225
>gi|430813360|emb|CCJ29283.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 741
Score = 405 bits (1041), Expect = e-109, Method: Compositional matrix adjust.
Identities = 247/667 (37%), Positives = 354/667 (53%), Gaps = 125/667 (18%)
Query: 28 EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDG 87
EFDNLYLDMNGI+H C+HP D E ++ +IF Y E + M++P+KL +A+DG
Sbjct: 24 EFDNLYLDMNGIVHPCTHPEDKPA--PTNEDEMMLEIFKYTERIINMVRPRKLLMIALDG 81
Query: 88 VAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAID 147
VAPRAKMNQQR RRFR+A++A E+KA + E L
Sbjct: 82 VAPRAKMNQQRSRRFRAAQDA---EKKASDLEEFL------------------------- 113
Query: 148 GVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQ 207
++L+ K E L +K +DSN ITPGTPFM L +
Sbjct: 114 ----------------------KLLKASGKSIDETLEKKKAWDSNVITPGTPFMDALAKS 151
Query: 208 LRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPN 267
LRY++ KI +D WK++ VI+S PGEGEHKIM++IR + P Y+PN
Sbjct: 152 LRYWIIYKINSDV---------AWKNLKVIVSDASVPGEGEHKIMEFIRSQRCSPGYDPN 202
Query: 268 MRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLM 327
+H +YGLDADLIMLGL THEP+F +LRE+V F ++KG H+
Sbjct: 203 TQHVIYGLDADLIMLGLATHEPHFRVLREDVFFQDANSKG--------------CHICGQ 248
Query: 328 RDYL--ELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLL 385
+ E +L P SF F +E IDDWV + F +GNDF+P+LP L I GA+ L
Sbjct: 249 IGHFAKECTEAELNIPNT-SFQFDLERAIDDWVCLCFFVGNDFLPHLPSLDIHEGAIETL 307
Query: 386 YKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFR---EKYADIQYL------ 436
+++E L + GY+ G ++LKR E L L + FR EK + +Y+
Sbjct: 308 GNIWKEKLHEMGGYLTMDGKIDLKRAEIILQALGQQEDHIFRKRHEKLSSSKYIPYLPND 367
Query: 437 ----EGKMGKKFSDVFHKEK---------SKEMDPDLAALIKATDDDYDDGTEEVLNYAN 483
K K + ++ + + + L+K ++D + T+E+ +
Sbjct: 368 LIMPSNKEDVKMITITNRNAVLNRKNLKLANNTNKNAIQLLKEINNDNSEETQEISSIVK 427
Query: 484 YEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHY 543
+ Y Y + ++ S G+ K D LD N + +
Sbjct: 428 -KSYNYQNCAVSTKS---SILGKRKAD----TLDDISKQNSAHDNNPD------------ 467
Query: 544 YYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEP 603
NGC SW WYYP+HYAP+ SD K+ S LN+++E+G+PFLP++QL+ VLP+AS LP P
Sbjct: 468 --NGCPSWKWYYPYHYAPFASDFKNISSLNIQFELGKPFLPYEQLMGVLPSAS---LPRP 522
Query: 604 YQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEE 663
Q+LM E+S I+++YP+EF D+NGKK W+ VVL+PFIDE +L+KA++ V L++EE
Sbjct: 523 LQSLMIEEHSEIIDFYPKEFPIDMNGKKFSWQGVVLLPFIDEKRLLKAIEKVYPQLSEEE 582
Query: 664 RSRNRHG 670
+SRN G
Sbjct: 583 KSRNTIG 589
>gi|55726904|emb|CAH90211.1| hypothetical protein [Pongo abelii]
Length = 402
Score = 405 bits (1040), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/307 (63%), Positives = 236/307 (76%), Gaps = 14/307 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFDSNCITPG
Sbjct: 77 PRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFDSNCITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RLH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHKIM++IR
Sbjct: 137 TEFMARLHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHKIMEFIRS 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K+KPD++PN RHCLYGLDADLIMLGL +HE +F LLREEV+F K + ++ PEET
Sbjct: 188 EKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFPLLREEVRFGGKKTQ---RVCAPEET 244
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFIP+LP LHI
Sbjct: 245 TFHLLHLSLMREYIDYEFSLLKEK--ITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
+ ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E + D+++ E
Sbjct: 303 NHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFE 362
Query: 438 GKMGKKF 444
K+G K+
Sbjct: 363 SKVGNKY 369
Score = 229 bits (583), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
>gi|426199678|gb|EKV49603.1| hypothetical protein AGABI2DRAFT_184268 [Agaricus bisporus var.
bisporus H97]
Length = 1454
Score = 405 bits (1040), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/441 (46%), Positives = 272/441 (61%), Gaps = 86/441 (19%)
Query: 7 FRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFH 66
R ERYP S++++E +IPEFDNLYLD NGIIHNCSHPND D HFR++E QIF IF
Sbjct: 12 IRVGRERYPLTSQLIQENKIPEFDNLYLDFNGIIHNCSHPNDEDAHFRLSEDQIFTSIFA 71
Query: 67 YIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEK 126
Y++ LF I+PKKLFFMA+DGVAPRAKMNQQR RRFR+AKEA+ + +KA++KGE+LP EK
Sbjct: 72 YVDHLFGKIKPKKLFFMAVDGVAPRAKMNQQRSRRFRTAKEAKDVREKAEKKGEKLPDEK 131
Query: 127 RFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTE 186
FD C FMA RL +
Sbjct: 132 AFD----SNCITPGTLFMA------------------------------------RLSEQ 151
Query: 187 KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGE 246
R+ FV KI+ D W+D+ V+LSGHE PGE
Sbjct: 152 LRY---------------------FVNKKISEDA---------NWRDIEVVLSGHEVPGE 181
Query: 247 GEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNK 306
GEHKIM+YIR +++PDYNPN+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 182 GEHKIMEYIRLSRAQPDYNPNIRHCLYGLDADLIMLGLLSHDPHFCLLREEVNL------ 235
Query: 307 GGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGN 366
E F+LLHL LMR+YL+LEF ++ L F +S+E +IDD++L+ +GN
Sbjct: 236 --------ESVNFYLLHLCLMREYLDLEFRDIES--TLPFGYSLERVIDDFILLAVFVGN 285
Query: 367 DFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF 426
DF+PNLPDLHI L L++VY++VLP L+GYINEGG +N+KR + L ++A ++ + F
Sbjct: 286 DFLPNLPDLHIHENGLEKLFEVYKKVLPGLEGYINEGGVINVKRLQVILDEMARWEQDVF 345
Query: 427 REKYADIQYLEGKMGKKFSDV 447
++YAD+ + +GK K ++
Sbjct: 346 EKEYADLNWFKGKQAKHVKEM 366
Score = 343 bits (880), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 240/748 (32%), Positives = 382/748 (51%), Gaps = 54/748 (7%)
Query: 506 QHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISD 565
+ K YY K++ + + + D Y+ +QW +HYYY+G SW W+Y +HYAP ISD
Sbjct: 546 EWKRGYYQGKMEISYDDPKGMGDLVYRYVEGLQWVMHYYYSGVASWGWFYNYHYAPRISD 605
Query: 566 IKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFAT 625
++ + +E+G PF PFQQL+ VLP+AS EL+PEPY+ LM NSPIL++YP EF +
Sbjct: 606 LRGVDKMTFNFELGTPFKPFQQLMGVLPSASMELIPEPYRELMYDPNSPILDFYPVEFES 665
Query: 626 DLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPM--LVYTYSNVNLG 683
DLNGKK +WEA+V IPFIDEV+L+KAM EH LT EER RN G +Y +
Sbjct: 666 DLNGKKAEWEAIVKIPFIDEVRLLKAMATREHRLTTEERKRNSWGTSTKFIYNPGESTVY 725
Query: 684 TALAPDYFPAINENHAVEKPL---YRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKHV 739
+ P +FP + H + D +++ P GL V+L + + FP+LK +
Sbjct: 726 PSSLPGFFPTLQRCHCRMEDFDLPTLDGLHLVP-----GLLDGVSLGIESLAGFPSLKTL 780
Query: 740 QFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRV 798
T ++ +V V Q S+N+S+++ +++ + + ++A++++G+ IF+ +P+L E V
Sbjct: 781 PHTTVLDFHRVNVHGQESKNKSMVVRIENPHEGSNSNEMANKMVGERIFMGWPYLQEGLV 840
Query: 799 QAVATKDSRISFDKNSGPVFERAAKDMQDA--------FQLSKKSITDGYYTKLGVDIGN 850
VA D S++K + V A K + + +Q + I Y K GV G
Sbjct: 841 --VALSDGLFSYEK-AALVEGDAPKVISNPHLQHGINHWQTKAERIESMYSKKYGVLTGR 897
Query: 851 TEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQ---SAVLNLQQARESLEYKTI 907
EVL++ +P++ K G + + + A Q S V++ E +
Sbjct: 898 VEVLLHIRPLKGLKRL--ENGALVKDYEDADKEIEQALQMCLSEVVSEDPRFLEREPPPL 955
Query: 908 DEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDL-VHLQDDTVY 966
+ F G + F L YG V T S + L+F ++ ++ + +
Sbjct: 956 NVEFPDGSKVFFLGEHAYGVAAQVTGTTDTSLSVV-LAFFPSEKAEMEKFKAVVNNRRAS 1014
Query: 967 NYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRR 1026
Y+PS+ A L ISP LSR T S ++ T ++ N+GL++KF K+ +VV +TR+
Sbjct: 1015 RYIPSFRAAESLRISPRALSRITSSFMVV--TGHDKQKINLGLSLKFEAKSLKVVDYTRK 1072
Query: 1027 DETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQG--EQRVAQIV 1084
D + W Y+E+ + L++ Y FPE+F L D SD + L DVF ++RV +I
Sbjct: 1073 D--GRHWEYSEKAMELLREYKAAFPEIFRCL-DADSDAMALASDVFSESSKPDERVREIK 1129
Query: 1085 SWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEK------VEKQITLFVKPNKLYI 1138
+WLK++ E + + V +E D+ K +K I + +
Sbjct: 1130 AWLKQKGVTNLEPVSLFCDQLSKETVVELEQLADSLTKSKSPSDFKKAIVKGIPRQAVLK 1189
Query: 1139 PKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKP 1198
P + +L + F L DRV +RD VPL +G +IGI + ++M DV++D P
Sbjct: 1190 PAHAVYRL---QNQWFGLGDRVAMVRDSGAVPLSVKGLVIGI-----NANSM-DVLWDVP 1240
Query: 1199 FPHGVKI--RCSESRGYRMPAQAMINLS 1224
F GV + RCS RG + + +NLS
Sbjct: 1241 FMSGVTLSDRCSPYRGMTVEFNSCLNLS 1268
>gi|397617693|gb|EJK64564.1| hypothetical protein THAOC_14691, partial [Thalassiosira oceanica]
Length = 1534
Score = 405 bits (1040), Expect = e-109, Method: Compositional matrix adjust.
Identities = 302/945 (31%), Positives = 442/945 (46%), Gaps = 168/945 (17%)
Query: 26 IPEFDNLYLDMNGIIHNCSHPN---------------DND-PHF---RITEKQIFQDIFH 66
+PEFD LYLDMNGIIH SH N D D P ITE+QIFQ++ +
Sbjct: 204 MPEFDRLYLDMNGIIHCASHNNSEEEVEKQIDGKESTDTDRPRIVGSAITEEQIFQNVCY 263
Query: 67 YIE-ILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTE 125
Y++ ++ ++QP +L F+AIDGVAPRAK+NQQR RR+RS E E+ +R +
Sbjct: 264 YLDRVISDIVQPTELVFLAIDGVAPRAKLNQQRSRRYRSGTEEEIEHHLMTL--QRAKSS 321
Query: 126 KRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG-RRFRSAKEAEV-LEQKAKEKGERL 183
D + ++ A DG P + + RG +RF EA A ++
Sbjct: 322 DHSDVDSAEYLIEAD--GGAFDGFWPMDRDDTARGAQRFSGKIEATTDKSSSASVSVDQT 379
Query: 184 PTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHET 243
PT + F SN ITPGT F R ++ F++ K+ TD WK+ + +I SGH+
Sbjct: 380 PTVQGFHSNAITPGTLFFDRCSSRIIAFIREKLDTDPRWKN---------LTIIFSGHDV 430
Query: 244 PGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTK 303
PGEGEHKIMD+IR+ K KP+Y+PN +HC+YG D DL+ML L THEP+ LLREEV F+
Sbjct: 431 PGEGEHKIMDFIRHEKHKPEYDPNKKHCIYGQDGDLVMLSLATHEPHMCLLREEVVFDMA 490
Query: 304 SNKGGSQIVTPEETK---------------------------------FFLLHLSLMRDY 330
K ++ E K F LLH+SL+RDY
Sbjct: 491 RRKVLERLAKVEHEKALDERAQDVGESSEGKSLPLLSPSIASYIHNANFELLHVSLLRDY 550
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
L LEF + +E + F +E IDD+V M F +GNDF+P++P L I + A LL+ Y+
Sbjct: 551 LGLEF-ETQEFYSKNSRFKLEPTIDDFVFMTFFVGNDFLPHMPALDIGDEAFDLLFYAYK 609
Query: 391 E--VLPTLDG-----------------------YINEGGYL-NLKRFEKFLTKLASFD-- 422
+ + DG Y+ + G + + R E FL+ + ++
Sbjct: 610 KNRIKWLKDGEYRRTVKITDKNNKTRNKTMHHPYLTDAGNITSGTRLEAFLSDVGGYEDP 669
Query: 423 -----FEQFREKYADIQYLEGKMGKKF----SDVFHKEKSKEMDPDLAALIKATDDDYDD 473
E E+ I+ + K G++ DV + + + L+++ D +
Sbjct: 670 YYSNRRESMEEENERIRKADRKAGRESVLPPQDVLDQVEMVGQEAYHNMLLQSADLN--- 726
Query: 474 GTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECY 533
+EV + D + N + K YY+ K E + Y
Sbjct: 727 -AQEV----EFTPVMSGDIPDSAFMNKLNSLVDVKGRYYYEKFGITPFDAEKHMTLRKEY 781
Query: 534 IRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHL------------------NLK 575
++ + W L YYY GCVSW W+YP++Y P ISD+ + + + ++
Sbjct: 782 VKGLVWTLEYYYKGCVSWDWFYPYNYGPMISDLTNMNSILNDISFFDKDSETQKKGKGVR 841
Query: 576 YEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWE 635
GEP PF+QLL LP +S LLP+PY+ LMT SP+ EYYPE F D+NGK+ WE
Sbjct: 842 RVSGEPLRPFEQLLGCLPPSSSYLLPKPYRWLMTSPESPLKEYYPESFTVDMNGKRWPWE 901
Query: 636 AVVLIPFIDEVKLIKAMDAV--EHLLTDEERSRNRHGPMLVYTYS----NVNLGTALAPD 689
AV L+PFID KLI+A + E L++EE+ N G V+T S N + T + D
Sbjct: 902 AVTLLPFIDADKLIEASRTLVDESFLSEEEKKLNVIGQSRVFTRSENMTNNFVRTQILED 961
Query: 690 --YFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIEN 747
+ N+ H +P D + G C FPTLK +
Sbjct: 962 TRWGRLHNDAHVAFQPELNRDTEL------PGSC-----------FPTLKDASISRLCRR 1004
Query: 748 AK-VKVFQQPSRNESIIIVQDKV--QVPSLKQVADQILGKTIFINYPHLIEIRVQAVATK 804
+ VF SR + +I D ++P +A + +G T++ YP L E V AVA
Sbjct: 1005 KVFINVFGLRSRYRTALIETDNELPELPPANLLAQKFIGSTVYFRYPILHEGLVCAVA-- 1062
Query: 805 DSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIG 849
DS + N P + + + Q + ++ Y +L V G
Sbjct: 1063 DSTTVYRGNEKP------RKLSSSAQEKRPTVLARMYKELQVGEG 1101
>gi|406601833|emb|CCH46556.1| 5'-3' exoribonuclease 1 [Wickerhamomyces ciferrii]
Length = 1519
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/440 (46%), Positives = 279/440 (63%), Gaps = 76/440 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFR+ISER+P +S+++ QIPEFDNLYLDMN I+H C+ P D D R++E
Sbjct: 1 MGIPKFFRFISERWPLISQLIDGNQIPEFDNLYLDMNSILHTCTRPKDEDVTKRLSE--- 57
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+++F I F ID +
Sbjct: 58 -EEVFSAI-------------FAYIDHL-------------------------------- 71
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
F T+K PK++F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA ++G
Sbjct: 72 ---------FDTIK---PKEVFYMAIDGVAPRAKMNQQRARRFRTAVDAEKNLEKAIKEG 119
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
+P ++ FDSN ITPGT FM +L + L+YF+ K++TD W++ V +ILSG
Sbjct: 120 TEIPKDEPFDSNSITPGTEFMAKLTRYLKYFIHKKVSTDSRWQN---------VQIILSG 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HE PGEGEHKIM++IR K+ DYNPN+RHC+YGLDADLIMLGL +HEP+F+LLREEV F
Sbjct: 171 HEVPGEGEHKIMEFIRTKKASKDYNPNLRHCIYGLDADLIMLGLVSHEPHFALLREEVTF 230
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
+ +Q T EE KF+LLHLSL+R+YLELEF LKE +SF + E ++DD++L+
Sbjct: 231 GRRQ----TQPKTVEEQKFYLLHLSLVREYLELEFQDLKE--TISFDYDFERVLDDFILI 284
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
++IGNDF+PNLPDLH+ GA PLL + ++E L LDGYINE G +NLKR +L L+
Sbjct: 285 MYVIGNDFLPNLPDLHLNKGAFPLLIETFKEALRNLDGYINEFGKINLKRLGSWLDILSK 344
Query: 421 FDFEQFREKYADIQYLEGKM 440
F+ E F + D+++ ++
Sbjct: 345 FEVENFEQVEVDLEWFNKQL 364
Score = 311 bits (796), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 236/768 (30%), Positives = 378/768 (49%), Gaps = 64/768 (8%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
D EE + + +F K +YY KL+++ + LR+ E Y+ +QW L YYY G S
Sbjct: 496 DVAEERQVIYNEKFENWKDNYYKEKLEFSIKDEDKLRELTENYVEGLQWVLFYYYKGVQS 555
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
W WYY +HYAP ISDIK + + E G PF PF+QL+AVLPA S++L+P Y+ LMT
Sbjct: 556 WPWYYRYHYAPRISDIKKGLDVIINLEKGTPFRPFEQLMAVLPARSRQLVPAVYRPLMTE 615
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
NSPI+++YP + TD+NGK +WEAVV + F+D +L AM LT EE+ RN G
Sbjct: 616 PNSPIIDFYPSDVETDMNGKTAEWEAVVKLSFVDPDRLKDAMKPHNAELTPEEKQRNSFG 675
Query: 671 PMLVYTYSNVNLGTALAP--DYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNL-K 727
+++T++ +P F I NH E+ + V+ + + GLC+ V L
Sbjct: 676 SDILFTFNPQIDEVYKSPLTGVFTDIENNHCFERGFHLPP--VNDSDVITGLCEGVFLGN 733
Query: 728 LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKV-QVPSLKQVADQILGKTI 786
+ FPTL+ + F ++++ A + +F QPSR+ S+I+ + Q +++Q A + +GK +
Sbjct: 734 QALAGFPTLRSIPFENELKAAGLYIFNQPSRSTSMILSHTDIHQGLTVEQFAKRFVGKVV 793
Query: 787 FINYPHLIEIRVQAVATKDSRISF---DKNSGPVFERAAKDMQDA--FQLSKKSITDGYY 841
+ YP+L E +V V+ +D + K G D +D ++ +K + +
Sbjct: 794 YTKYPYLRESKV--VSIQDGEFDYFLVKKEKGYKVTSRPMDPEDVKQYKATKANFIRSFL 851
Query: 842 TKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARES 901
+ G+++ + LV PV K T +++S YA + + L+ E+
Sbjct: 852 STKGIELKDVRALVKVLPVSGLKR--------TTSGAYVKS---YAKEEELYPLELVVEN 900
Query: 902 LEYKT----------IDEIFYPGCQCFALSNPHYGSGGCVI---STVKEENSFIKLSFKV 948
++ K I+E F + L YG V ST + + S +K S K
Sbjct: 901 VKNKDERFTERPPVPINEEFPIDSKVIFLGAYAYGGEATVTGYHSTTRLDLSVVKKSIK- 959
Query: 949 QQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAK--RHN 1006
EP + + Y PSY VA L++ L LS+ T S I EG+K R
Sbjct: 960 -DEPTIGTSKAALEKRSMQYYPSYEVARMLNLQGLFLSKITSSFLI-----EGSKGQRIF 1013
Query: 1007 IGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIY 1066
IGL++KF + E+V+GFTR+ E + W ++ + LI +Y +QFP+VF + +S
Sbjct: 1014 IGLDLKFEARREKVLGFTRKSE--RGWEFSSLAIQLITDYRRQFPDVFNAISKLASKKNI 1071
Query: 1067 LRDDVFPHQG----EQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTC-- 1120
DVF ++ ++R+ + WLK Q + V + + K + IE+ ++
Sbjct: 1072 NVADVFGNKDSKAVDERLKSLADWLKVQKSSFIRV-TLESDSLSTKSIQEIENQIELYAV 1130
Query: 1121 --EKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTII 1178
+K E + V + + P + DKL FKL DRVV + D VPL +GT+I
Sbjct: 1131 QDDKEEHKKLAGVPRDAVLDPSVSFDKLKAQA---FKLGDRVVYVHDSGKVPLFSKGTVI 1187
Query: 1179 GIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
+ V+FDKP G K R +R + + ++N+S
Sbjct: 1188 AY--QSLGSNVTLQVLFDKPLIGGNKFDGRLRTNRALNVDSSLVLNIS 1233
>gi|413932825|gb|AFW67376.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 990
Score = 402 bits (1033), Expect = e-108, Method: Compositional matrix adjust.
Identities = 255/717 (35%), Positives = 365/717 (50%), Gaps = 145/717 (20%)
Query: 1 MGVPKFFRYISERYPCLSE---------------VVREYQIP-----EFDNLYLDMNGII 40
MGVP F+R++++RYP V + + P EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP T ++F+ IF YI+ LF +I+P+KL +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCFHPEGRPAP--TTYDEVFKSIFDYIDHLFGLIRPRKLLYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AK+A + + K F+
Sbjct: 119 RFRAAKDAADAAAEEER------LRKEFE------------------------------- 141
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
E L QK K + DSN ITPGT FM L L+Y+++L++
Sbjct: 142 ------AEGRTLAQKEKSEA--------IDSNVITPGTEFMFVLSTALQYYIQLRLN--- 184
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
TL W+ V +ILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLI
Sbjct: 185 ---HTLG---WQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNK---------------GGSQ----IVTP--EETKF 319
ML L THE +FS+LRE + + K G SQ + P + K+
Sbjct: 239 MLALATHEVHFSILREVISMPGQHEKCFLCGQVGHLAAECRGPSQPDNSVELPPIHKKKY 298
Query: 320 FLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN 379
L++ ++R+YL + + P F + E +IDD+V M F +GNDF+P++P L I
Sbjct: 299 QFLNIWVLREYLAKDLEIIDAP----FKINFERLIDDFVFMCFFVGNDFLPHMPTLEIRE 354
Query: 380 GALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGK 439
GA+ LL +Y+ ++ GY+ + G + L R E F+ +A + EQ +K A IQ + +
Sbjct: 355 GAINLLMSIYRSEFTSMGGYLTDVGEVILDRVEHFIQSVA-VNEEQIFQKRARIQ--QAR 411
Query: 440 MGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTN 499
+ +E S+E D Y D + L Y E YY+D+
Sbjct: 412 ENNEEKHKMQRENSEE-------------DQYVDKVK--LGEPGYRERYYADK------- 449
Query: 500 FFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHY 559
F E + +K +V RD + Y+ + W + YYY G SW W+YP+HY
Sbjct: 450 -FKEEAE------------SKPIVQVRRDVVQKYVEGLCWVMRYYYQGVCSWQWFYPYHY 496
Query: 560 APYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYY 619
AP+ SD+K + L + + +G+PF PF QL+ LPAAS LP+ Y +LM+ +SP+ +Y
Sbjct: 497 APFASDLKGLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMSDPDSPLKSFY 556
Query: 620 PEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
P++F D+NGK+ W+ V +PFIDE +L+ +E LT+EE+ RNR ++Y
Sbjct: 557 PKDFEIDMNGKRFAWQGVAKLPFIDERRLLAETRKLEDTLTEEEKFRNRTMLDIIYV 613
>gi|239612327|gb|EEQ89314.1| exonuclease Kem1 [Ajellomyces dermatitidis ER-3]
Length = 1440
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/442 (47%), Positives = 283/442 (64%), Gaps = 77/442 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I + PKKLFFMAIDGVAPRAKMNQQR RRFR+A +AEV ++KA +
Sbjct: 65 -------FNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTALDAEVAKEKAIK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E+ FDSNCITPGT FM +L QQL+YF+ K++ D W+ V ++L
Sbjct: 118 QGVEMPKEEAFDSNCITPGTEFMAKLTQQLKYFINKKVSEDV---------EWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P Y+P++RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQSKAQPGYHPDVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S K ++ E F+L+HL ++R+YLELEF +L+E L FPF +E +IDD++
Sbjct: 229 TFGRQSQKKSKEL---EHQNFYLMHLCMVREYLELEFQELEEADALQFPFDLERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++K+Y++VLP L GYINE G +NL+R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGVLLDSL 345
Query: 419 ASFDFEQFREKYADIQYLEGKM 440
+ +F F +Y+D ++++ KM
Sbjct: 346 SDVEFRFFEAEYSDARWIKSKM 367
Score = 340 bits (871), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 232/739 (31%), Positives = 376/739 (50%), Gaps = 35/739 (4%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K DYY K + +E +R E Y++ +QW L+YYY G SW W+Y +HY+P
Sbjct: 513 KFQEWKNDYYKSKFGWGLDNHEEMRKLTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPM 572
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K ++ +++G+PF PF+QL+ VLP SK+++P + LMT SPI+++YP +
Sbjct: 573 ISDVKFGLKADMNFDLGQPFRPFEQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRD 632
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---N 679
F D+NGKK +WEAVV IPFIDE +L+ AM +HLLT ER+RN G L +TYS
Sbjct: 633 FELDMNGKKMEWEAVVKIPFIDEKRLLGAMATKQHLLTPAERARNEFGVTLKFTYSPDIE 692
Query: 680 VNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKH 738
++L FP I + H +E D + + GL + V L + FP+LK
Sbjct: 693 YTYPSSLV-GVFPDIAKCHCIENVF--DLPTMEGLEPVVGLVEGVKLGHEALAGFPSLKT 749
Query: 739 VQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRV 798
+ ++ V VFQQ SRNES+++ + S ++A Q LG+ + + YP L E +V
Sbjct: 750 LPHNGQLGFHGVSVFQQESRNESMVVTLSAPENRSSVELAKQKLGQRVHVGYPFLQEAKV 809
Query: 799 QAVATKD-SRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYG 857
V+ + + D V A D ++ I Y +LG+ +G+ E +V+
Sbjct: 810 SRVSDELFDYMYVDGEQHVVSIPHAPSQIDQWRRKTHQIESYYSKRLGMVVGDIESMVHV 869
Query: 858 QPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESL---EYKTIDEIFYP 913
Q + + G ++ I T YA Q V + + E ++E F
Sbjct: 870 QML--KGLMKTDEGATVKEFADIPGIETDYALQLVVDQVMCEDDRFIEREALPVEEEFPE 927
Query: 914 GCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQDDTVYNYLPSY 972
G + F L +YG+ V T E+ L V+ +EP+ + + + Y PS+
Sbjct: 928 GTRAFFLGEYNYGA--PVHITGHEDGKLSGLVSVVKGKEPEFGRDLTRAAERLSPYSPSF 985
Query: 973 TVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKK 1032
+A L+++PL L++ T S ++ ++ R N+GLN+KF + ++V+G++RR +
Sbjct: 986 AIARSLNLNPLTLAKITSSFTVVLDSQ----RINLGLNLKFEARKQKVLGYSRRGPSG-- 1039
Query: 1033 WFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWLKEQP 1091
W ++E+ + LI+ YM +FPE ++ D + D +P + ++ +I +WLK
Sbjct: 1040 WEFSEKAIGLIQQYMIKFPEFIAGIQRKPQGDGFQATDFYPPETAAAKIKEIQAWLKSIE 1099
Query: 1092 HAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKV----EKQITLFVKPNKLYIPKPTLDKLC 1147
E P A +++ +V IE A D + E + V N L P +L
Sbjct: 1100 AKHFERVPLEAEQLNSDLVKSIEQAADELVRTRPAPEAKKMKGVPRNALLKPADAEHRLG 1159
Query: 1148 PDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI-- 1205
+ F L DRVV ++ VP+ RGTI+G+ + TS + D+VFD F G +
Sbjct: 1160 ---NQSFSLGDRVVYAQESGKVPIATRGTIVGLTR--TSRTLLLDIVFDVSFMSGTTLGD 1214
Query: 1206 RCSESRGYRMPAQAMINLS 1224
RCS RG +PA ++N++
Sbjct: 1215 RCSPFRGSTVPASCVLNVT 1233
>gi|261202580|ref|XP_002628504.1| exonuclease Kem1 [Ajellomyces dermatitidis SLH14081]
gi|239590601|gb|EEQ73182.1| exonuclease Kem1 [Ajellomyces dermatitidis SLH14081]
Length = 1440
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/442 (47%), Positives = 283/442 (64%), Gaps = 77/442 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I + PKKLFFMAIDGVAPRAKMNQQR RRFR+A +AEV ++KA +
Sbjct: 65 -------FNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTALDAEVAKEKAIK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E+ FDSNCITPGT FM +L QQL+YF+ K++ D W+ V ++L
Sbjct: 118 QGIEMPKEEAFDSNCITPGTEFMAKLTQQLKYFINKKVSEDV---------EWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P Y+P++RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQSKAQPGYHPDVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S K ++ E F+L+HL ++R+YLELEF +L+E L FPF +E +IDD++
Sbjct: 229 TFGRQSQKKSKEL---EHQNFYLMHLCMVREYLELEFQELEEADALQFPFDLERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++K+Y++VLP L GYINE G +NL+R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGVLLDSL 345
Query: 419 ASFDFEQFREKYADIQYLEGKM 440
+ +F F +Y+D ++++ KM
Sbjct: 346 SDVEFRFFEAEYSDARWIKSKM 367
Score = 341 bits (875), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 233/739 (31%), Positives = 376/739 (50%), Gaps = 35/739 (4%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K DYY K + +E +R E Y++ +QW L+YYY G SW W+Y +HY+P
Sbjct: 513 KFQEWKNDYYKSKFGWGLDNHEEMRKLTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPM 572
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K ++ +++G+PF PF+QL+ VLP SK+++P + LMT SPI+++YP +
Sbjct: 573 ISDVKFGLKADMNFDLGQPFRPFEQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRD 632
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---N 679
F D+NGKK +WEAVV IPFIDE +L+ AM +HLLT ER+RN G L +TYS
Sbjct: 633 FELDMNGKKMEWEAVVKIPFIDEKRLLGAMATKQHLLTPAERARNEFGVTLKFTYSPDIE 692
Query: 680 VNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKH 738
++L FP I + H +E D + + GL + V L + FP+LK
Sbjct: 693 YTYPSSLV-GVFPDIAKCHCIENVF--DLPTMEGLEPVVGLVEGVKLGHEALAGFPSLKT 749
Query: 739 VQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRV 798
+ ++ V VFQQ SRNES+++ + S ++A Q LG+ + + YP L E +V
Sbjct: 750 LPHNGQLGFHGVSVFQQESRNESMVVTLSAPENRSSVELAKQKLGQRVHVGYPFLQEAKV 809
Query: 799 QAVATKD-SRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYG 857
V+ + + D V A D ++ I Y +LG+ +G+ E +V+
Sbjct: 810 SRVSDELFDYMYVDGEQHVVSIPHAPSQIDQWRRKTHQIESYYSKRLGMVVGDIESMVHV 869
Query: 858 QPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESL---EYKTIDEIFYP 913
Q + + G ++ I T YA Q V + + E ++E F
Sbjct: 870 QML--KGLMKTDEGATVKEFADIPGIETDYALQLVVDQVMCEDDRFIEREALPVEEEFPE 927
Query: 914 GCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQDDTVYNYLPSY 972
G + F L +YG+ V T E+ L V+ +EP+ + + + Y PS+
Sbjct: 928 GTRAFFLGEYNYGA--PVHITGHEDGKLSGLVSVVKGKEPEFGRDLTRAAERLSPYSPSF 985
Query: 973 TVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKK 1032
+A L+++PL L++ T S ++ ++ R N+GLN+KF + ++V+G++RR +
Sbjct: 986 AIARSLNLNPLTLAKITSSFTVVLDSQ----RINLGLNLKFEARKQKVLGYSRRGPSG-- 1039
Query: 1033 WFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWLKEQP 1091
W ++E+ + LI+ YM +FPE ++ D + D +P + ++ +I +WLK
Sbjct: 1040 WEFSEKAIGLIQQYMIKFPEFIAGIQRKPQGDGFQATDFYPPETAAAKIKEIQAWLKSIE 1099
Query: 1092 HAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKV----EKQITLFVKPNKLYIPKPTLDKLC 1147
E P A +D+ +V IE A D + E + V N L P +L
Sbjct: 1100 AKHFERVPLEAEQLDSDLVKSIEQAADELVRTRPAPEAKKMKGVPRNALLKPADAEHRLG 1159
Query: 1148 PDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI-- 1205
+ F L DRVV ++ VP+ RGTI+G+ + TS + D+VFD F G +
Sbjct: 1160 ---NQSFSLGDRVVYAQESGKVPIATRGTIVGLTR--TSRTLLLDIVFDVSFMSGTTLGD 1214
Query: 1206 RCSESRGYRMPAQAMINLS 1224
RCS RG +PA ++N++
Sbjct: 1215 RCSPFRGSTVPASCVLNVT 1233
>gi|327353279|gb|EGE82136.1| exonuclease [Ajellomyces dermatitidis ATCC 18188]
Length = 1440
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/442 (47%), Positives = 283/442 (64%), Gaps = 77/442 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I + PKKLFFMAIDGVAPRAKMNQQR RRFR+A +AEV ++KA +
Sbjct: 65 -------FNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTALDAEVAKEKAIK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E+ FDSNCITPGT FM +L QQL+YF+ K++ D W+ V ++L
Sbjct: 118 QGIEMPKEEAFDSNCITPGTEFMAKLTQQLKYFINKKVSEDV---------EWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P Y+P++RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQSKAQPGYHPDVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S K ++ E F+L+HL ++R+YLELEF +L+E L FPF +E +IDD++
Sbjct: 229 TFGRQSQKKSKEL---EHQNFYLMHLCMVREYLELEFQELEEADALQFPFDLERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++K+Y++VLP L GYINE G +NL+R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGVLLDSL 345
Query: 419 ASFDFEQFREKYADIQYLEGKM 440
+ +F F +Y+D ++++ KM
Sbjct: 346 SDVEFRFFEAEYSDARWIKSKM 367
Score = 342 bits (876), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 233/739 (31%), Positives = 376/739 (50%), Gaps = 35/739 (4%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K DYY K + +E +R E Y++ +QW L+YYY G SW W+Y +HY+P
Sbjct: 513 KFQEWKNDYYKSKFGWGLDNHEEMRKLTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPM 572
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K ++ +++G+PF PF+QL+ VLP SK+++P + LMT SPI+++YP +
Sbjct: 573 ISDVKFGLKADMNFDLGQPFRPFEQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRD 632
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---N 679
F D+NGKK +WEAVV IPFIDE +L+ AM +HLLT ER+RN G L +TYS
Sbjct: 633 FELDMNGKKMEWEAVVKIPFIDEKRLLGAMATKQHLLTPAERARNEFGVTLKFTYSPDIE 692
Query: 680 VNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKH 738
++L FP I + H +E D + + GL + V L + FP+LK
Sbjct: 693 YTYPSSLV-GVFPDIAKCHCIENVF--DLPTMEGLEPVVGLVEGVKLGHEALAGFPSLKT 749
Query: 739 VQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRV 798
+ ++ V VFQQ SRNES+++ + S ++A Q LG+ + + YP L E +V
Sbjct: 750 LPHNGQLGFHGVSVFQQESRNESMVVTLSAPENRSSVELAKQKLGQRVHVGYPFLQEAKV 809
Query: 799 QAVATKD-SRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYG 857
V+ + + D V A D ++ I Y +LG+ +G+ E +V+
Sbjct: 810 SRVSDELFDYMYVDGEQHVVSIPHAPSQIDQWRRKTHQIESYYSKRLGMVVGDIESMVHV 869
Query: 858 QPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESL---EYKTIDEIFYP 913
Q + + G ++ I T YA Q V + + E ++E F
Sbjct: 870 QML--KGLMKTDEGATVKEFADIPGIETDYALQLVVDQVMCEDDRFIEREALPVEEEFPE 927
Query: 914 GCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQDDTVYNYLPSY 972
G + F L +YG+ V T E+ L V+ +EP+ + + + Y PS+
Sbjct: 928 GTRAFFLGEYNYGA--PVHITGHEDGKLSGLVSVVKGKEPEFGRDLTRAAERLSPYSPSF 985
Query: 973 TVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKK 1032
+A L+++PL L++ T S ++ ++ R N+GLN+KF + ++V+G++RR +
Sbjct: 986 AIARSLNLNPLTLAKITSSFTVVLDSQ----RINLGLNLKFEARKQKVLGYSRRGPSG-- 1039
Query: 1033 WFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWLKEQP 1091
W ++E+ + LI+ YM +FPE ++ D + D +P + ++ +I +WLK
Sbjct: 1040 WEFSEKAIGLIQQYMIKFPEFIAGIQRKPQGDGFRATDFYPPETAAAKIKEIQAWLKSIE 1099
Query: 1092 HAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKV----EKQITLFVKPNKLYIPKPTLDKLC 1147
E P A +D+ +V IE A D + E + V N L P +L
Sbjct: 1100 AKHFERVPLEAEQLDSDLVKSIEQAADELVRTRPAPEAKKMKGVPRNALLKPADAEHRLG 1159
Query: 1148 PDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI-- 1205
+ F L DRVV ++ VP+ RGTI+G+ + TS + D+VFD F G +
Sbjct: 1160 ---NQSFSLGDRVVYAQESGKVPIATRGTIVGLTR--TSRTLLLDIVFDVSFMSGTTLGD 1214
Query: 1206 RCSESRGYRMPAQAMINLS 1224
RCS RG +PA ++N++
Sbjct: 1215 RCSPFRGSTVPASCVLNVT 1233
>gi|115455883|ref|NP_001051542.1| Os03g0794800 [Oryza sativa Japonica Group]
gi|50400038|gb|AAT76426.1| putative 5'-3' exonuclease [Oryza sativa Japonica Group]
gi|108711531|gb|ABF99326.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
gi|113550013|dbj|BAF13456.1| Os03g0794800 [Oryza sativa Japonica Group]
Length = 988
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 248/709 (34%), Positives = 364/709 (51%), Gaps = 145/709 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQ--------IP-----------EFDNLYLDMNGII 40
MGVP F+R++++RYP +S+ V E +P EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP T ++F+ IF YI+ LF +++P+KL +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCFHPEGRPAP--TTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AK+A + + + E G
Sbjct: 119 RFRAAKDAADAAAEEERLRKEFEAE----------------------------------G 144
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
R + +++E ++ SN ITPGTPFM L L+Y+++L++
Sbjct: 145 RTLVAKEKSEAID-----------------SNVITPGTPFMFVLSSALQYYIQLRLNHTP 187
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W+ V V+LS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLI
Sbjct: 188 ---------GWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNK---------------GGSQ----IVTP--EETKF 319
ML L THE +FS+LRE + + K G Q + P + K+
Sbjct: 239 MLSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRGSGQADKTVELPPIHKKKY 298
Query: 320 FLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN 379
L++ ++R+YLE + + P F + E ++DD+V M F +GNDF+P++P L I
Sbjct: 299 QFLNIWVLREYLEKDLEIVDPP----FKINFERVVDDFVFMCFFVGNDFLPHMPTLEIRE 354
Query: 380 GALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGK 439
GA+ LL +Y+ ++ GY+ +GG + L R E F+ +A + EQ +K A IQ
Sbjct: 355 GAINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHE-EQIFQKRARIQ----- 408
Query: 440 MGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTN 499
+ + E+ + + + D+ Y D + L Y YY+++
Sbjct: 409 -----KAIQNNEERNRVQTE-----NSEDNQYVDKVK--LGEPGYRVRYYAEK------- 449
Query: 500 FFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHY 559
F E + K ++V RD + Y+ + W + YYY G SW W+YP+HY
Sbjct: 450 -FKEEAE------------LKPIDQVQRDVVQKYVEGLCWVMRYYYQGVCSWQWFYPYHY 496
Query: 560 APYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYY 619
AP+ SD+K + L + + +G+PF PF QL+ LPAAS LP+ Y +LM NSP+ +Y
Sbjct: 497 APFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMNDPNSPLKSFY 556
Query: 620 PEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
P++F D+NGK+ W+ + +PFIDE +L+ +E LTDEER RNR
Sbjct: 557 PKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETLTDEERFRNR 605
>gi|70985050|ref|XP_748031.1| exonuclease Kem1 [Aspergillus fumigatus Af293]
gi|66845659|gb|EAL85993.1| exonuclease Kem1, putative [Aspergillus fumigatus Af293]
gi|159126045|gb|EDP51161.1| exonuclease Kem1, putative [Aspergillus fumigatus A1163]
Length = 1418
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/439 (47%), Positives = 281/439 (64%), Gaps = 73/439 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S ++ E +IPEFD LYLDMNGIIHNC+H + + P FR+TE ++
Sbjct: 1 MGVPKFFRWLSERYPTISMLIAENRIPEFDALYLDMNGIIHNCTHKDSDSPTFRMTEDKM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF+YIE L+ I+P+KLFFMA+DGVAPRAKMNQQR RRFR+A +AEV ++KA +G
Sbjct: 61 FIAIFNYIEHLYGKIKPRKLFFMAVDGVAPRAKMNQQRARRFRTALDAEVAKEKAIAQGI 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+P E FD C FM AK+ QQ
Sbjct: 121 EMPKEDPFD----SNCITPGTEFM--------AKLTQQ---------------------- 146
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
L+YF+ KI+ DK W+ V ++LSG
Sbjct: 147 ---------------------------LKYFINKKISEDK---------DWQGVDIVLSG 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HE PGEGEHKIM+YIR+ K++P Y+PN+RHCLYGLDADLIMLGL +H+P+F LLREEV F
Sbjct: 171 HEVPGEGEHKIMEYIRHAKAQPGYDPNIRHCLYGLDADLIMLGLLSHDPHFCLLREEVTF 230
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
+ K ++ E F+LLHL ++R+YLELEF +L++ GVL FPF +E +IDD++LM
Sbjct: 231 GRQVQKKPKEL---EHQNFYLLHLCMVREYLELEFQELEQEGVLDFPFDMERVIDDFILM 287
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F +GNDF+PNLP+LHI GAL L++K+Y++VLP + GY+NEGG +NLKR + L+
Sbjct: 288 AFFVGNDFLPNLPNLHINEGALSLMFKIYKDVLPKMGGYVNEGGVINLKRLGMLIEALSD 347
Query: 421 FDFEQFREKYADIQYLEGK 439
+F F +Y+D +++ K
Sbjct: 348 VEFRFFEAEYSDARWINAK 366
Score = 340 bits (872), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 245/752 (32%), Positives = 386/752 (51%), Gaps = 49/752 (6%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F K YY K + +E LR E Y++ +QW L+YYY G SW W++ +HYAP
Sbjct: 505 KFQDWKDKYYMSKFGWGLDNHEELRKLTENYVQGLQWVLYYYYRGIASWPWFFKYHYAPM 564
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+ + ++ +++G+PF P++QL+ VLP SK+++P +++LMT SPI+++YP E
Sbjct: 565 ISDVIKGLNADMNFKLGQPFKPYEQLMGVLPDRSKQIVPAAFRDLMTSPESPIIDFYPRE 624
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---N 679
F D+NGKK +WEAVV IPFIDE +L++A+ EHLLT EE++RN G L +TYS N
Sbjct: 625 FELDMNGKKMEWEAVVKIPFIDERRLLEALATREHLLTPEEKARNGFGVSLKFTYSPEVN 684
Query: 680 VNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQDVNL-KLYVTHFP 734
++L P FP I H +E +I+ P + GL + V L + FP
Sbjct: 685 FTYPSSL-PGVFPDIPSCHCIE------NIFDLPTMDGLEPYIGLVEGVQLGAAALAGFP 737
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLI 794
+LK + ++ V VFQQ SRNES++I S ++A Q LGK +F+ YP L
Sbjct: 738 SLKTLPHVGQLGFHGVCVFQQESRNESMVITVLDPGSRSNIELAKQKLGKRVFVGYPFLQ 797
Query: 795 EIRVQAVATKDSRISFDKNSGPVFERAAKDMQ-DAFQLSKKSITDGYYTKLGVDIGNTEV 853
E V V+ + + V + Q D ++ I Y +LG IG E
Sbjct: 798 EALVIRVSDELFDYLLPEGENHVVSIPHTEAQIDQWKKKADKIEGIYSRRLGTIIGPVES 857
Query: 854 LVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQ---SAVLNLQQARESLEYKTIDE 909
+V+ Q ++ G ++ I T YA Q V+N + + I++
Sbjct: 858 MVHVQLLKG--LIKTDEGATIKEFADIPGQETDYALQLVVDEVINPDERFIERDALPIEK 915
Query: 910 IFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQDDTVYNY 968
F G + F L + +YG V T E+ L ++ +EP+ + + + Y
Sbjct: 916 EFPEGSRAFFLGDFNYGR--PVHITGHEDGKVNGLIAAIKGREPEFGRDRAREAERLCPY 973
Query: 969 LPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDE 1028
+PS+ +A L ++PL+L++ T S S + +R N+GLN+KF + ++V+G++RR E
Sbjct: 974 MPSFAIARSLRLNPLVLAKITSSF----SVDIEGQRVNLGLNLKFEARKQKVLGYSRRGE 1029
Query: 1029 TTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWL 1087
+ W ++ + V L++ YM +FPE ++ + D Y D +P ++ +I WL
Sbjct: 1030 SG--WEFSPKAVDLLQQYMIKFPEFIAGIQRNPQKDRYQPTDFYPEDVALVKMKEIRDWL 1087
Query: 1088 KEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLY-IPKPTLDKL 1146
K E P A +D+ VV LIE D V+ Q + +P K+ +P+ L L
Sbjct: 1088 KAMEAKNFERVPLEAEQLDSDVVKLIEQDADRL--VQSQPPM--QPKKIRGVPRSAL--L 1141
Query: 1147 CPDP------DTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFP 1200
P + FKL DRVV +D VP+ RGT++G+ + T + DVVFD F
Sbjct: 1142 RPSDVEQRLQNQTFKLGDRVVYAQDSGKVPIATRGTVVGLTR--TPRAMLLDVVFDVSFM 1199
Query: 1201 HGVKI--RCSESRGYRMPAQAMINLSYGERLC 1230
G + RCS RG + A +++N+SY + L
Sbjct: 1200 SGTTLGDRCSPFRGQTVLASSVLNVSYRQLLA 1231
>gi|119498925|ref|XP_001266220.1| exonuclease Kem1, putative [Neosartorya fischeri NRRL 181]
gi|119414384|gb|EAW24323.1| exonuclease Kem1, putative [Neosartorya fischeri NRRL 181]
Length = 1414
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/439 (47%), Positives = 281/439 (64%), Gaps = 73/439 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S ++ E +IPEFD LYLDMNGIIHNC+H + + P FR+TE ++
Sbjct: 1 MGVPKFFRWLSERYPTISMLIAENRIPEFDALYLDMNGIIHNCTHKDSDSPTFRMTEDKM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF+YIE L+ I+P+KLFFMA+DGVAPRAKMNQQR RRFR+A +AEV ++KA +G
Sbjct: 61 FIAIFNYIEHLYGKIKPRKLFFMAVDGVAPRAKMNQQRARRFRTALDAEVAKEKAIAQGI 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+P E FD C FM AK+ QQ
Sbjct: 121 EMPKEDPFD----SNCITPGTEFM--------AKLTQQ---------------------- 146
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
L+YF+ KI+ DK W+ V ++LSG
Sbjct: 147 ---------------------------LKYFINKKISEDK---------DWQGVDIVLSG 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HE PGEGEHKIM+YIR+ K++P Y+PN+RHCLYGLDADLIMLGL +H+P+F LLREEV F
Sbjct: 171 HEVPGEGEHKIMEYIRHAKAQPGYDPNIRHCLYGLDADLIMLGLLSHDPHFCLLREEVTF 230
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
+ K ++ E F+LLHL ++R+YLELEF +L++ GVL FPF +E +IDD++LM
Sbjct: 231 GRQVQKKPKEL---EHQNFYLLHLCMVREYLELEFQELEQEGVLDFPFDMERVIDDFILM 287
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F +GNDF+PNLP+LHI GAL L++K+Y++VLP + GY+NEGG +NLKR + L+
Sbjct: 288 AFFVGNDFLPNLPNLHINEGALSLMFKIYKDVLPKMGGYVNEGGVINLKRLGMLIEALSD 347
Query: 421 FDFEQFREKYADIQYLEGK 439
+F F +Y+D +++ K
Sbjct: 348 VEFRFFEAEYSDARWINAK 366
Score = 337 bits (864), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 242/752 (32%), Positives = 385/752 (51%), Gaps = 49/752 (6%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F K YY K + +E +R E Y++ +QW L+YYY G SW W++ +HYAP
Sbjct: 505 KFQDWKDKYYMSKFGWGLDNHEEMRKLTENYVQGLQWVLYYYYRGIASWPWFFKYHYAPM 564
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+ + ++ +++G+PF P++QL+ VLP SK+++P +++LMT SPI+++YP +
Sbjct: 565 ISDVIKGLNADMNFKLGQPFKPYEQLMGVLPDRSKQIVPAAFRDLMTSPESPIIDFYPRD 624
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---N 679
F D+NGKK +WEAVV IPFIDE +L++A+ EHLLT EE++RN G L +TYS N
Sbjct: 625 FELDMNGKKMEWEAVVKIPFIDERRLLEALATREHLLTPEEKARNGFGVSLKFTYSPEVN 684
Query: 680 VNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQDVNL-KLYVTHFP 734
++L P FP + H +E +I+ P + GL + V L + FP
Sbjct: 685 FTYPSSL-PGVFPDLPSCHCIE------NIFDLPTMDGLEPYIGLVEGVQLGAAALAGFP 737
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLI 794
+LK + ++ V VFQQ SRNES++I S ++A Q LGK +F+ YP L
Sbjct: 738 SLKTLPHVGQLGFHGVCVFQQESRNESMVITVLDPGSRSNIELAKQKLGKRVFVGYPFLQ 797
Query: 795 EIRVQAVATKDSRISFDKNSGPVFERAAKDMQ-DAFQLSKKSITDGYYTKLGVDIGNTEV 853
E V V+ + + V + Q D ++ I Y +LG IG E
Sbjct: 798 EALVIRVSDELFDYLLPEGENHVVSIPHTEAQIDQWKKKADKIEGMYSRRLGTIIGPVES 857
Query: 854 LVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQ---SAVLNLQQARESLEYKTIDE 909
+V+ Q ++ G ++ I T YA Q V+N + + I++
Sbjct: 858 MVHVQLLKG--LIKTDEGATIKEFADIPGQETDYALQLVVDEVINPDERFIERDALPIEK 915
Query: 910 IFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQDDTVYNY 968
F G + F L + +YG V T E L ++ +EP+ + + + Y
Sbjct: 916 EFPEGSRAFFLGDFNYGR--PVHITGHENGKVNGLIAAIKGREPEFGKDRAREAERLCPY 973
Query: 969 LPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDE 1028
+PS+ +A L ++PL+L++ T S S + +R N+GLN+KF + ++V+G++RR E
Sbjct: 974 MPSFAIARSLRLNPLVLAKITSSF----SVDMEGQRVNLGLNLKFEARKQKVLGYSRRGE 1029
Query: 1029 TTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWL 1087
+ W ++ + V L++ YM +FPE ++ + D Y D +P ++ +I WL
Sbjct: 1030 SG--WEFSPKAVDLLQQYMIKFPEFIAGIQRNPQKDRYQPTDFYPEDVALVKMKEIRDWL 1087
Query: 1088 KEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLY-IPKPTLDKL 1146
K E P A +D+ VV LIE D V+ Q + +P K+ +P+ L L
Sbjct: 1088 KAMEAKNFERVPLEAEQLDSDVVKLIEQDADQL--VQSQPPM--QPKKIRGVPRSAL--L 1141
Query: 1147 CPDP------DTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFP 1200
P + FKL DRVV +D VP+ RGT++G+ + T + DVVFD F
Sbjct: 1142 RPSDVEQRLQNQTFKLGDRVVYAQDSGKVPIATRGTVVGLTR--TPRAMLLDVVFDVSFM 1199
Query: 1201 HGVKI--RCSESRGYRMPAQAMINLSYGERLC 1230
G + RCS RG + A +++N+SY + L
Sbjct: 1200 SGTTLGDRCSPFRGQTVLASSVLNVSYRQLLA 1231
>gi|125588231|gb|EAZ28895.1| hypothetical protein OsJ_12935 [Oryza sativa Japonica Group]
Length = 997
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 249/714 (34%), Positives = 363/714 (50%), Gaps = 146/714 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQ--------IP-----------EFDNLYLDMNGII 40
MGVP F+R++++RYP +S+ V E +P EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP T ++F+ IF YI+ LF +++P+KL +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCFHPEGRPAP--TTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AK+A + + + E G
Sbjct: 119 RFRAAKDAADAAAEEERLRKEFEAE----------------------------------G 144
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
R + +++E ++ SN ITPGTPFM L L+Y+++L++
Sbjct: 145 RTLVAKEKSEAID-----------------SNVITPGTPFMFVLSSALQYYIQLRLNHTP 187
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W+ V V+LS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLI
Sbjct: 188 ---------GWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNK---------------GGSQ----IVTP--EETKF 319
ML L THE +FS+LRE + + K G Q + P + K+
Sbjct: 239 MLSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRGSGQADKTVELPPIHKKKY 298
Query: 320 FLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN 379
L++ ++R+YLE + + P F + E ++DD+V M F +GNDF+P++P L I
Sbjct: 299 QFLNIWVLREYLEKDLEIVDPP----FKINFERVVDDFVFMCFFVGNDFLPHMPTLEIRE 354
Query: 380 GALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGK 439
GA+ LL +Y+ ++ GY+ +GG + L R E F+ +A + EQ +K A IQ
Sbjct: 355 GAINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHE-EQIFQKRARIQ----- 408
Query: 440 MGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTN 499
KA ++ + + N E+ Y D+
Sbjct: 409 -------------------------KAIQNNEERNRVQT---ENSEDNQYVDKAGFKTLG 440
Query: 500 FFSEFGQ--HKTDYYHYKLD---YAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWY 554
F + G+ ++ YY K K ++V RD + Y+ + W + YYY G SW W+
Sbjct: 441 FPVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKYVEGLCWVMRYYYQGVCSWQWF 500
Query: 555 YPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSP 614
YP+HYAP+ SD+K + L + + +G+PF PF QL+ LPAAS LP+ Y +LM NSP
Sbjct: 501 YPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMNDPNSP 560
Query: 615 ILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
+ +YP++F D+NGK+ W+ + +PFIDE +L+ +E LTDEER RNR
Sbjct: 561 LKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETLTDEERFRNR 614
>gi|125546024|gb|EAY92163.1| hypothetical protein OsI_13876 [Oryza sativa Indica Group]
Length = 997
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 249/714 (34%), Positives = 363/714 (50%), Gaps = 146/714 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQ--------IP-----------EFDNLYLDMNGII 40
MGVP F+R++++RYP +S+ V E +P EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP T ++F+ IF YI+ LF +++P+KL +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCFHPEGRPAP--TTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AK+A + + + E G
Sbjct: 119 RFRAAKDAADAAAEEERLRKEFEAE----------------------------------G 144
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
R + +++E ++ SN ITPGTPFM L L+Y+++L++
Sbjct: 145 RTLVAKEKSEAID-----------------SNVITPGTPFMFVLSSALQYYIQLRLNHTP 187
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W+ V V+LS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLI
Sbjct: 188 ---------GWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNK---------------GGSQ----IVTP--EETKF 319
ML L THE +FS+LRE + + K G Q + P + K+
Sbjct: 239 MLSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRGSGQADKTVELPPIHKKKY 298
Query: 320 FLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN 379
L++ ++R+YLE + + P F + E ++DD+V M F +GNDF+P++P L I
Sbjct: 299 QFLNIWVLREYLEKDLEIVDPP----FKINFERVVDDFVFMCFFVGNDFLPHMPTLEIRE 354
Query: 380 GALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGK 439
GA+ LL +Y+ ++ GY+ +GG + L R E F+ +A + EQ +K A IQ
Sbjct: 355 GAINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHE-EQIFQKRARIQ----- 408
Query: 440 MGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTN 499
KA ++ + + N E+ Y D+
Sbjct: 409 -------------------------KAIQNNEERNRVQT---ENSEDNQYVDKAGFKTLG 440
Query: 500 FFSEFGQ--HKTDYYHYKLD---YAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWY 554
F + G+ ++ YY K K ++V RD + Y+ + W + YYY G SW W+
Sbjct: 441 FPVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKYVEGLCWVMRYYYQGVCSWQWF 500
Query: 555 YPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSP 614
YP+HYAP+ SD+K + L + + +G+PF PF QL+ LPAAS LP+ Y +LM NSP
Sbjct: 501 YPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMNDPNSP 560
Query: 615 ILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
+ +YP++F D+NGK+ W+ + +PFIDE +L+ +E LTDEER RNR
Sbjct: 561 LKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETLTDEERFRNR 614
>gi|426391130|ref|XP_004061937.1| PREDICTED: 5'-3' exoribonuclease 2 [Gorilla gorilla gorilla]
Length = 1099
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 252/714 (35%), Positives = 356/714 (49%), Gaps = 110/714 (15%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 194 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 244
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 245 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 267
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 268 DEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 327
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 328 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 379
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 380 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 438
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 439 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 498
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I A+
Sbjct: 499 LNVLREYLERELTMAS----LPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAID 554
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKK 443
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 555 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD----------- 603
Query: 444 FSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSE 503
D F + + ++ + I DG+ L + SD + E N
Sbjct: 604 -EDSFRRRQKEKRKRMKSPSISPNTSFTSDGSPSPLGGIK-RKAEDSDSEPEPEDNVRLW 661
Query: 504 FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYI 563
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+
Sbjct: 662 EAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFA 721
Query: 564 SDIKDFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
SD + + + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+
Sbjct: 722 SDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPED 781
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
FA DLNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 782 FAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 835
>gi|295657260|ref|XP_002789200.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284447|gb|EEH40013.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1445
Score = 399 bits (1024), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/442 (47%), Positives = 283/442 (64%), Gaps = 77/442 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I + PKKLFFMAIDGVAPRAKMNQQR RRFR+A +AEV ++KA +
Sbjct: 65 -------FNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTAYDAEVAKEKAIK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E+ FDSNCITPGT FM +L QQL+YF+ K++ D W+ V ++L
Sbjct: 118 QGIEMPKEEAFDSNCITPGTEFMAKLTQQLKYFINKKVSEDV---------EWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P Y+P++RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQTKAQPGYHPDVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S K ++ E F+L+HL ++R+YLELEF +L+E L FPF +E IIDD++
Sbjct: 229 TFGRQSQKKSKEL---EHQNFYLMHLCMVREYLELEFQELEEEDALQFPFDLERIIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++K+Y++VLP L GYINE G +NL+R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGILLDSL 345
Query: 419 ASFDFEQFREKYADIQYLEGKM 440
+ +F F +Y+D ++++ K+
Sbjct: 346 SDVEFRFFEAEYSDARWIKSKV 367
Score = 340 bits (873), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 237/743 (31%), Positives = 375/743 (50%), Gaps = 43/743 (5%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K +YY K + +E +R E Y++ +QW L+YYY G SW W+Y +HY+P
Sbjct: 515 KFQEWKNNYYKSKFRWGMDNHEEMRKLTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPM 574
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K ++ +++G+PF PFQQL+ VLP SK+++P + LMT SPI+++YP +
Sbjct: 575 ISDVKLGLKADMNFDLGQPFHPFQQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRD 634
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---N 679
F D+NGKK DWEAVV IPFI+E +L+KAM EHLLT EE++RN G L +TYS
Sbjct: 635 FELDMNGKKMDWEAVVKIPFIEEKRLLKAMATKEHLLTPEEKARNEFGVTLKFTYSPDIE 694
Query: 680 VNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKH 738
++L FP I H +E D + + GL + V L + FP+LK
Sbjct: 695 YIYPSSLV-GVFPDIARCHCIENVF--DLPTMDGLEPFVGLVEGVKLGHEALAGFPSLKT 751
Query: 739 VQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRV 798
+ ++ V VFQQ SRNES+++ + + S ++A Q LG+ + + YP L E +V
Sbjct: 752 LPHHGQLSFHGVSVFQQESRNESMVVTLTEPENRSSVELAKQKLGQRVHVGYPFLQEAKV 811
Query: 799 QAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTK-LGVDIGNTEVLVYG 857
V+ + + V Q K + YY+K LG+ +G E +V+
Sbjct: 812 TRVSDELFDYMYVDGEQHVVSIPHTPSQANQWKRKAEQIESYYSKRLGMIVGEIESMVHV 871
Query: 858 QPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQ------QARESLEYKTIDEI 910
Q + + +G ++ I T YA Q V + RE+L ++E
Sbjct: 872 QML--KGLIKTDQGATVKEFADIPGIETDYALQLVVDRVMCEDNRFIEREAL---PVEEE 926
Query: 911 FYPGCQCFALSNPHYGSGGCVISTVKEENSFIK--LSFKVQQEPDLSDLVHLQDDTVYNY 968
F G + F L +YG+ + EN + +S +EP+ + + + + Y
Sbjct: 927 FPEGTRAFFLGEYNYGA---PVHITGHENGKLSGLVSVVKAKEPEFARDLTRSAERISPY 983
Query: 969 LPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDE 1028
PS+ +A L ++PL L++ T S +I +R N+GLN+KF K +V+G++RR
Sbjct: 984 SPSFAIARSLHLNPLTLAKITSSFTVILD----GQRINLGLNLKFEAKKLKVLGYSRRGP 1039
Query: 1029 TTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWL 1087
T W ++E+ L+ YM +FPE ++ D + D +P + ++ +I +WL
Sbjct: 1040 TG--WEFSEKATDLLHQYMIKFPEFIAGIQRKPQGDGFQATDFYPAEIASAKIKEIQAWL 1097
Query: 1088 KEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKV----EKQITLFVKPNKLYIPKPTL 1143
K E P A +D+ +V IE A D + E + V N L P
Sbjct: 1098 KSIEAKNFERVPLEAEQLDSDLVKSIEQAADELVRTRPEPEPKKIRGVPRNALLKPSDAE 1157
Query: 1144 DKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGV 1203
+L + F L DRVV +++ VP+ +GT++G+ + TS + D+VFD F G
Sbjct: 1158 HRLG---NQSFSLGDRVVYVQESGKVPIATKGTVVGLTR--TSRTLLLDIVFDVSFMSGT 1212
Query: 1204 KI--RCSESRGYRMPAQAMINLS 1224
+ RCS RG +PA A +NL+
Sbjct: 1213 TLGDRCSLFRGSTVPASAALNLT 1235
>gi|380483599|emb|CCF40522.1| 5'-3' exoribonuclease, partial [Colletotrichum higginsianum]
Length = 553
Score = 398 bits (1023), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/440 (47%), Positives = 276/440 (62%), Gaps = 74/440 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDN-DPHFRITEKQ 59
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + D FR++E++
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDTGEDTTFRLSEEE 60
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+F IF+YIE LF I+PK+LFFMAIDGVAPRAKMNQQR RRFR+A + E KA +G
Sbjct: 61 MFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARRFRTALDTEKARDKAISEG 120
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 179
+P E FD C FM AK+ QQ
Sbjct: 121 VEMPKEPPFD----SNCITPGTEFM--------AKLTQQ--------------------- 147
Query: 180 GERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILS 239
L+YFV K++ D W+ ++LS
Sbjct: 148 ----------------------------LKYFVNKKVSEDA---------DWQGCEIVLS 170
Query: 240 GHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK 299
GHE PGEGEHKIM+YIR K++PDY+PN+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 171 GHEVPGEGEHKIMEYIRNAKAQPDYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVT 230
Query: 300 FNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVL 359
F + NK ++ + E F+LLHL ++R+YLELEF +L++PG LSFPF +E +IDD++L
Sbjct: 231 FG-RVNKAKTREL--EHQNFYLLHLCIVREYLELEFQELQQPGRLSFPFDLERVIDDFIL 287
Query: 360 MGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
M F +GNDF+PNLP LHI GAL ++++Y+ VLP DGYINEGG +NL R ++ L +LA
Sbjct: 288 MAFFVGNDFLPNLPRLHINEGALAAMFRIYKSVLPQGDGYINEGGVINLPRLQRLLNELA 347
Query: 420 SFDFEQFREKYADIQYLEGK 439
+ QF +D ++ + K
Sbjct: 348 KDETNQFENDVSDEKWFQSK 367
>gi|299749174|ref|XP_001838563.2| exonuclease II [Coprinopsis cinerea okayama7#130]
gi|298408317|gb|EAU83256.2| exonuclease II [Coprinopsis cinerea okayama7#130]
Length = 1468
Score = 398 bits (1023), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/462 (45%), Positives = 283/462 (61%), Gaps = 89/462 (19%)
Query: 12 ERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEIL 71
ERYP S++++E +IPEFD NGIIHNCSHPND D HFR++E+QIF IF Y++ L
Sbjct: 44 ERYPLTSQLIQENKIPEFD-----FNGIIHNCSHPNDEDAHFRLSEEQIFTSIFAYVDHL 98
Query: 72 FRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFI 131
F I+PKKLFFMA+DGVAPRAKMNQQR RRFR+AKEA+ + +KA+ +GE+LP EK FD
Sbjct: 99 FEKIKPKKLFFMAVDGVAPRAKMNQQRSRRFRTAKEAKEVREKAERRGEKLPEEKAFD-- 156
Query: 132 TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDS 191
C FMA RL + R+
Sbjct: 157 --SNCITPGTPFMA------------------------------------RLSAQLRY-- 176
Query: 192 NCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKI 251
F+ KIT D W+ V V+LSGHE PGEGEHKI
Sbjct: 177 -------------------FINKKITEDS---------NWRSVEVVLSGHEVPGEGEHKI 208
Query: 252 MDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQI 311
M+YIR +++PDYNPN+RHCLYGLDADLIMLGL +H+P+F LLREEVKF + KG +
Sbjct: 209 MEYIRLSRAQPDYNPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVKFGPQRKKGNQSL 268
Query: 312 VTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPN 371
E T F+LLHLSLMR+YL+LEF ++ VL FP+++E +IDD++L+ +GNDF+PN
Sbjct: 269 ---ESTNFYLLHLSLMREYLDLEFRDIEH--VLPFPYNLERVIDDFILLAVFVGNDFLPN 323
Query: 372 LPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYA 431
LPDLHI L L+ VY++ LP L+GYINE G +N++R + L ++A ++ E F ++YA
Sbjct: 324 LPDLHIHENGLEKLFDVYKKALPGLNGYINESGTINVQRLQVVLDEMAVWEREIFEKEYA 383
Query: 432 DIQYLEGK---------MGKKFSDVFHKEKSKEMDPDLAALI 464
D+ + +GK MG+K S + ++ +E+ + A +
Sbjct: 384 DMNWFKGKQARHVKEMEMGRKRSKLVLTKRQREIFDKVKAFV 425
Score = 318 bits (814), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 238/770 (30%), Positives = 381/770 (49%), Gaps = 68/770 (8%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCV 549
D D + + + + K YY KL+ + + + D Y+ +QW +HYYY+G
Sbjct: 533 GDFDARYERSIKEKMDEWKRSYYREKLEISYDDPKEMGDLVYRYVEGLQWVMHYYYSGVA 592
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMT 609
SW W+Y +HYAP ISD+++ + +E+G+PF P++QL+ VLP ASK+ +P YQ+LM
Sbjct: 593 SWGWFYNYHYAPRISDLRNVDQMTFNFELGKPFKPYEQLMGVLPVASKDHIPLAYQDLMY 652
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
NSPIL++YP EF +DLNGKKQDWEAVV IPFIDE +L+KAM + EH LT EER RN
Sbjct: 653 DPNSPILDFYPLEFESDLNGKKQDWEAVVKIPFIDEERLLKAMASREHRLTPEERQRNTW 712
Query: 670 GPMLVYTYSNV--NLGTALAPDYFPAINENHAVEKPL---YRDDIYVHPNKLRKGLCQDV 724
G +++ + + P +FP I V +P D +++ P GLC V
Sbjct: 713 GTSTKFSHGTGEPTVYPSSLPGFFPPIYRCTCVMEPFDLPTLDGLHLVP-----GLCDGV 767
Query: 725 NLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQIL 782
L + FP+LK + + + V + SRN+S+I+ +++ + +++A + +
Sbjct: 768 FLGAEALAGFPSLKTLPHSATLGYHGVNIHGSESRNKSMIVHIENPYENTKPEEIAQKFI 827
Query: 783 GKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDM------QDAFQLSKKS- 835
+ IF+ +P L E +V VA DS +++ + V R AK + Q + K+
Sbjct: 828 DERIFMGWPFLQEGKV--VAVSDSLFKYERMA-VVPGRPAKIVSTPHSPQGLGHWASKAE 884
Query: 836 -ITDGYYTKLGVDIGNTEVLVYGQPVESRKY---------FFGPRGKVTQQRTFIRSTVT 885
I Y + GV G+ VL++ +P++ K + GP ++ Q V
Sbjct: 885 RIEQVYSKRCGVLTGSVGVLLHIRPLKGLKRLETGALVKDYEGPDKEIEQ-------AVQ 937
Query: 886 YAYQSAVLNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLS 945
Q V + E + E F G + F L YG V +T + S I
Sbjct: 938 MCLQEVVSEDPRYMERAP-PPLHEEFPDGSKVFFLGEHAYGVAAQVSATTQNTLSVIVAF 996
Query: 946 FKVQ-QEPD-LSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAK 1003
F + QE D +V + + Y PSY VA L +S L + T S ++ S E+
Sbjct: 997 FPAERQEIDKFKAIVDTRKSS--RYFPSYRVADMLGMSGRALGKITSSFLVLTSDEQ--- 1051
Query: 1004 RHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSD 1063
+ N+GL++KF K+ +V+ ++R+D + W Y+E+ V LI+ Y FPEVF L D+ D
Sbjct: 1052 KTNLGLSLKFEAKSMKVIDYSRKD--GRNWEYSEKAVELIREYKAAFPEVFASL-DNGGD 1108
Query: 1064 DIYLRDDVFPH-QGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTC-- 1120
I D+FP + + RV +I +WLK + E + + + IE D+
Sbjct: 1109 AIARATDIFPEAEADARVKEIKAWLKTKGVRDFEPVSLFCDQLSKETIEEIEQLADSITK 1168
Query: 1121 ----EKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGT 1176
+++K I + + P + +L + F L DRV ++D VPL +G
Sbjct: 1169 SKSSSQIKKAIVKGIPRQAVLKPSHAVYRL---QNQHFALGDRVTMVQDSGGVPLAVKGV 1225
Query: 1177 IIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
++G+ S D ++DV F G + RCS+ RG + + +NL+
Sbjct: 1226 VVGL--NARSMDVLWDVAFIS----GTTLNNRCSQYRGSTVAFNSCLNLT 1269
>gi|325093685|gb|EGC46995.1| exonuclease II Exo2 [Ajellomyces capsulatus H88]
Length = 1451
Score = 398 bits (1022), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/442 (47%), Positives = 282/442 (63%), Gaps = 77/442 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I + PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE+ ++KA +
Sbjct: 65 -------FNYIEHLYGKIKPKQLFFMAIDGVAPRAKMNQQRARRFRTALDAELAKEKAIK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E+ FDSNCITPGT FM +L QQL+YF+ K++ D W+ V ++L
Sbjct: 118 QGIEMPKEEAFDSNCITPGTEFMAKLTQQLKYFINKKVSEDV---------EWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P Y P++RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQSKAQPGYQPDIRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S K ++ E F+L+HL ++R+YLELEF +L+E L FPF +E +IDD++
Sbjct: 229 TFGRQSQKKSKEL---EHQNFYLMHLCMVREYLELEFQELEEENALQFPFDLERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++KVY++VLP L GYINE G +NL+R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAWMFKVYKQVLPKLGGYINEQGTINLERLGVLLDSL 345
Query: 419 ASFDFEQFREKYADIQYLEGKM 440
+ +F F +++D ++++ KM
Sbjct: 346 SDVEFRFFEAEFSDARWIKSKM 367
Score = 338 bits (867), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 233/739 (31%), Positives = 372/739 (50%), Gaps = 35/739 (4%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K +YY K + +E +R E Y++ +QW L+YYY G SW W+Y +HY+P
Sbjct: 512 KFQEWKDNYYKSKFGWGMDNHEEMRQLTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPM 571
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K ++ +++G+PF PF+QL+ VLP SK+++P Y LMT SPI+++YP +
Sbjct: 572 ISDVKLGLEADMNFDLGQPFHPFEQLMGVLPDRSKQIVPSAYHELMTSPESPIIDFYPRD 631
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---N 679
F D+NGKK +WEAVV IPFIDE +L+ AM +HLLT EE +RN G L +TYS
Sbjct: 632 FELDMNGKKMEWEAVVKIPFIDEKRLLSAMATKKHLLTPEENARNEFGVTLKFTYSPDIE 691
Query: 680 VNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKH 738
++LA FP I + H +E D + + GL + V L + FP+LK
Sbjct: 692 YIYPSSLA-GVFPDIAKCHCIENVF--DLPTMEGLEPFVGLVEGVKLGHEALAGFPSLKT 748
Query: 739 VQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRV 798
+ ++ V VFQQ SRNES+++ + + S ++A Q LG+ + + YP L E +V
Sbjct: 749 LPHNGQLGFHGVSVFQQESRNESMVVTLSEPENRSSVELAKQKLGQKVHVGYPFLQEAKV 808
Query: 799 QAVATKD-SRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYG 857
V+ + + D V D ++ + Y +LG+ +G E +V+
Sbjct: 809 TRVSDELFDYMHVDGEQHVVSIPHTPSQTDQWRRKAHQVESYYSKRLGMVVGEIESMVHV 868
Query: 858 QPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESL---EYKTIDEIFYP 913
Q + + G ++ I T YA Q V + + E ++E F
Sbjct: 869 QML--KGLMKTAEGASVKEFADIPGIETDYALQLVVDRVMCEDDRFIEREALPVEEEFPE 926
Query: 914 GCQCFALSNPHYGSGGCVISTVKEENSFIKL-SFKVQQEPDLSDLVHLQDDTVYNYLPSY 972
G + F L +YG+ V T E L S +EP+ + + + Y PS+
Sbjct: 927 GTRAFFLGEYNYGA--PVHITGHEAGKLSGLVSVTKGREPEFGRDLTRAAEKLSPYSPSF 984
Query: 973 TVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKK 1032
+A L+++PL L++ T S ++ +R N+GLN+KF K +V+G++RR T
Sbjct: 985 AIARSLNLNPLALAKITSSFTVVLD----GQRINLGLNLKFEAKKLKVLGYSRRGPTG-- 1038
Query: 1033 WFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWLKEQP 1091
W ++E+ + L++ YM +FPE ++ D + D +P + ++ +I +WLK
Sbjct: 1039 WEFSEKAIDLLQQYMIKFPEFIAGIQRKPQGDGFQATDFYPAETAAAKIKEIQAWLKSIE 1098
Query: 1092 HAKAEVRPCGAAVVDAKVVSLIEHAVD----TCEKVEKQITLFVKPNKLYIPKPTLDKLC 1147
+ P A +D+ +V IE A D T E + V N L P +L
Sbjct: 1099 AKNFDRVPLEAEQLDSNLVKSIEQAADELLRTRPAAEAKKLKGVPRNALLKPADAEHRLG 1158
Query: 1148 PDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI-- 1205
+ F L DRVV ++ VP+ RGTI+G+ + TS + D+VFD F G +
Sbjct: 1159 ---NQSFSLGDRVVYAQESGKVPIATRGTIVGLTR--TSRTLLLDIVFDVSFMSGTTLGD 1213
Query: 1206 RCSESRGYRMPAQAMINLS 1224
RCS RG +PA ++N++
Sbjct: 1214 RCSPFRGSTVPASCVLNVT 1232
>gi|6599262|emb|CAB63749.1| hypothetical protein [Homo sapiens]
Length = 1159
Score = 398 bits (1022), Expect = e-107, Method: Compositional matrix adjust.
Identities = 236/649 (36%), Positives = 368/649 (56%), Gaps = 36/649 (5%)
Query: 609 TLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
T E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L EER RN+
Sbjct: 1 TNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDE-RLLEAMETCNHSLKKEERKRNQ 59
Query: 669 HGPMLVYTYSNVN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNL 726
H L+ Y + + P+ FPAI K + D V NK + + +
Sbjct: 60 HSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNK--ITRIDQK 117
Query: 727 KLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQVADQILG 783
LY FPTLKH++ ++ + V+VFQQ SR E++ I+V + +++ VA +LG
Sbjct: 118 ALYFCGFPTLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVENVASSVLG 177
Query: 784 KTIFINYPHLIEIRVQAVATKDSRISFDKNSGP-------------VFERAAKDMQDAFQ 830
K++F+N+PHL E RV AV+ +++ ++ G V K+ Q +
Sbjct: 178 KSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGDKE-QSNWA 236
Query: 831 LSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQS 890
+ I++ Y + G+ I T +VY Q + RKY G+V ++ + + V + YQ+
Sbjct: 237 KEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQVVPFVYQT 296
Query: 891 AVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVIST--VKEENSFIKLSFK 947
V +++ KT+D++F F L P+YG G V + V E I++ F
Sbjct: 297 IVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEGR-IRVIFS 355
Query: 948 VQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEE---GAKR 1004
+ EP+L L+ Q Y P Y +AS+L +S L+SRFTGSIFI + G +
Sbjct: 356 IPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHK 415
Query: 1005 HNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDD 1064
N+GLN+KF++KNEEV G+T++ +W Y+ L+ Y+++ PE+F ++ +S +D
Sbjct: 416 ANVGLNLKFNKKNEEVPGYTKK--VGSEWMYSSAAEQLLAEYLERAPELFSYIAKNSQED 473
Query: 1065 IYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCE 1121
++ DD++P + G ++V +I++WLK P + C ++DA +V IE V+ C+
Sbjct: 474 VFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVEKCK 533
Query: 1122 --KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIG 1179
K K++ + VKP+ LY P + PD D +F LFDRVVN+R+ ++VP+G RGTIIG
Sbjct: 534 QRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPVGLRGTIIG 593
Query: 1180 IVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
I D +++V+FD+ FP G+ IRCS RGYR+P A++NLS+G R
Sbjct: 594 IKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSR 642
>gi|226294212|gb|EEH49632.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb18]
Length = 1445
Score = 398 bits (1022), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/442 (47%), Positives = 282/442 (63%), Gaps = 77/442 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHRDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I + PKKLFFMAIDGVAPRAKMNQQR RRFR+A +AEV ++KA +
Sbjct: 65 -------FNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTAYDAEVAKEKAIK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L QQL+YF+ K++ D W+ V ++L
Sbjct: 118 QGIEMPKEAAFDSNCITPGTEFMAKLTQQLKYFINKKVSEDV---------EWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P Y+P++RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQTKAQPGYHPDVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S K ++ E F+L+HL ++R+YLELEF +L+E L FPF +E IIDD++
Sbjct: 229 TFGRQSQKKSKEL---EHQNFYLMHLCMVREYLELEFQELEEEDALQFPFDLERIIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++K+Y++VLP L GYINE G +NL+R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGILLDSL 345
Query: 419 ASFDFEQFREKYADIQYLEGKM 440
+ +F F +Y+D ++++ K+
Sbjct: 346 SDVEFRFFEAEYSDARWIKSKI 367
Score = 346 bits (888), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 236/743 (31%), Positives = 378/743 (50%), Gaps = 43/743 (5%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K +YY K + +E +R E Y++ +QW L+YYY G SW W+Y +HY+P
Sbjct: 515 KFQEWKNNYYKSKFRWGMDNHEEMRKLTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPM 574
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K ++ +++G+PF PFQQL+ VLP SK+++P + LMT SPI+++YP +
Sbjct: 575 ISDVKLGLKADMNFDLGQPFHPFQQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRD 634
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---N 679
F D+NGKK DWEAVV IPFI+E +L+KAM EHLLT EE++RN G L +TYS
Sbjct: 635 FELDMNGKKMDWEAVVKIPFIEEKRLLKAMATKEHLLTPEEKARNEFGVTLKFTYSPDIE 694
Query: 680 VNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKH 738
++L FP I H +E D + + GL + V L + FP+LK
Sbjct: 695 YIYPSSLV-GVFPDIARCHCIENVF--DLPTMDGLEPFVGLVEGVKLGHEALAGFPSLKT 751
Query: 739 VQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRV 798
+ ++ V VFQQ SRNES+++ + + S ++A Q LG+ + + YP L E +V
Sbjct: 752 LPHHGQLSFHGVSVFQQESRNESMVVTLTEPENRSSVELAKQKLGQRVHVGYPFLQEAKV 811
Query: 799 QAVATKD-SRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYG 857
V+ + + D V + ++ + I Y +LG+ +G E +V+
Sbjct: 812 TRVSDELFDYMCVDGEQHVVSIPHTPSQANQWKRKAEQIESYYSKRLGMIVGEIESMVHV 871
Query: 858 QPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQ------ARESLEYKTIDEI 910
Q + + +G ++ I T YA Q V + RE+L ++E
Sbjct: 872 QML--KGLIKTDQGATVKEFADIPGIETDYALQLVVDRVMCEDNRFIEREAL---PVEEE 926
Query: 911 FYPGCQCFALSNPHYGSGGCVISTVKEENSFIK--LSFKVQQEPDLSDLVHLQDDTVYNY 968
F G + F L +YG+ + EN + +S +EP+ + + + Y
Sbjct: 927 FPEGTRAFFLGEYNYGA---PVHITGHENGKLSGLVSVVKAKEPEFGRDLTRSAERISPY 983
Query: 969 LPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDE 1028
PS+ +A L ++PL L++ T S +I +R N+GLN+KF K +V+G++RR
Sbjct: 984 SPSFAIARSLHLNPLTLAKITSSFTVILD----GQRINLGLNLKFEAKKLKVLGYSRRGP 1039
Query: 1029 TTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWL 1087
T W ++E+ L++ YM +FPE ++ D + D +P + ++ +I +WL
Sbjct: 1040 TG--WEFSEKATNLLQQYMIKFPEFIAGIQRKPQGDGFQATDFYPAEIASAKIKEIQAWL 1097
Query: 1088 KEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKV----EKQITLFVKPNKLYIPKPTL 1143
K E P A +D+ +V IEHA D + E + V N L P
Sbjct: 1098 KSIEAKNFERVPLEAEQLDSDLVKSIEHAADELVRTRPEPEPKKMRGVPRNALLKPSDAE 1157
Query: 1144 DKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGV 1203
+L + F L DRV+ +++ VP+ RGT++G+++ TS + D+VFD F G
Sbjct: 1158 HRLG---NQSFSLGDRVIYVQESGKVPIATRGTVVGLMR--TSSTLLLDIVFDVSFMSGT 1212
Query: 1204 KI--RCSESRGYRMPAQAMINLS 1224
+ RCS RG +PA A +NL+
Sbjct: 1213 TLGDRCSLFRGSTVPASAALNLT 1235
>gi|225557050|gb|EEH05337.1| exonuclease [Ajellomyces capsulatus G186AR]
Length = 1454
Score = 398 bits (1022), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/442 (47%), Positives = 282/442 (63%), Gaps = 77/442 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I + PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE+ ++KA +
Sbjct: 65 -------FNYIEHLYGKIKPKQLFFMAIDGVAPRAKMNQQRARRFRTALDAELAKEKAIK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E+ FDSNCITPGT FM +L QQL+YF+ K++ D W+ V ++L
Sbjct: 118 QGIEMPKEEAFDSNCITPGTEFMAKLTQQLKYFINKKVSEDV---------EWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P Y P++RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQSKAQPGYQPDIRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S K ++ E F+L+HL ++R+YLELEF +L+E L FPF +E +IDD++
Sbjct: 229 TFGRQSQKKSKEL---EHQNFYLMHLCMVREYLELEFQELEEENALQFPFDLERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++KVY++VLP L GYINE G +NL+R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAWMFKVYKQVLPKLGGYINEQGTINLERLGVLLDSL 345
Query: 419 ASFDFEQFREKYADIQYLEGKM 440
+ +F F +++D ++++ KM
Sbjct: 346 SDVEFRFFEAEFSDARWIKSKM 367
Score = 337 bits (863), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 232/739 (31%), Positives = 372/739 (50%), Gaps = 35/739 (4%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K +YY K + +E +R E Y++ +QW L+YYY G SW W+Y +HY+P
Sbjct: 512 KFQEWKDNYYKSKFGWGMDNHEEMRQLTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPM 571
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K ++ +++G+PF PF+QL+ VLP SK+++P + LMT SPI+++YP +
Sbjct: 572 ISDVKLGLEADMNFDLGQPFHPFEQLMGVLPDRSKQIVPSAFHELMTSPESPIIDFYPRD 631
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---N 679
F D+NGKK +WEAVV IPFIDE +L+ AM +HLLT EE +RN G L +TYS
Sbjct: 632 FELDMNGKKMEWEAVVKIPFIDEKRLLSAMATKKHLLTPEENARNEFGVTLKFTYSPDIE 691
Query: 680 VNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKH 738
++LA FP I + H +E D + + GL + V L + FP+LK
Sbjct: 692 YIYPSSLA-GVFPDIAKCHCIENVF--DLPTMEGLEPFVGLVEGVKLGHEALAGFPSLKT 748
Query: 739 VQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRV 798
+ ++ V VFQQ SRNES+++ + + S ++A Q LG+ + + YP L E +V
Sbjct: 749 LPHNGQLGFHGVSVFQQESRNESMVVTLSEPENRSSVELAKQKLGQRVHVGYPFLQEAKV 808
Query: 799 QAVATKD-SRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYG 857
V+ + + D V D ++ + Y +LG+ +G E +V+
Sbjct: 809 TRVSDELFDYMYVDGEQHIVSIPHTPSQTDQWRRKAHQVESYYSKRLGMVVGEIESMVHV 868
Query: 858 QPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESL---EYKTIDEIFYP 913
Q + + G ++ I T YA Q V + + E ++E F
Sbjct: 869 QML--KGLMKTAEGATVKEFADIPGIETDYALQLVVDRVMCEDDRFIEREALPVEEEFPE 926
Query: 914 GCQCFALSNPHYGSGGCVISTVKEENSFIKL-SFKVQQEPDLSDLVHLQDDTVYNYLPSY 972
G + F L +YG+ V T E L S +EP+ + + + Y PS+
Sbjct: 927 GTRAFFLGEYNYGA--PVHITGHEAGKLSGLVSVTKGREPEFGRDLTRAAEKLSPYSPSF 984
Query: 973 TVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKK 1032
+A L+++PL L++ T S ++ +R N+GLN+KF K +V+G++RR T
Sbjct: 985 AIARSLNLNPLALAKITSSFTVVLD----GQRINLGLNLKFEAKKLKVLGYSRRGPTG-- 1038
Query: 1033 WFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWLKEQP 1091
W ++E+ + L++ YM +FPE ++ D + D +P + ++ +I +WLK
Sbjct: 1039 WEFSEKAIDLLQQYMIKFPEFIAGIQRKPQGDGFQATDFYPAETAAAKIKEIQAWLKSIE 1098
Query: 1092 HAKAEVRPCGAAVVDAKVVSLIEHAVD----TCEKVEKQITLFVKPNKLYIPKPTLDKLC 1147
+ P A +D+ +V IE A D T E + V N L P +L
Sbjct: 1099 AKNFDRVPLEAEQLDSNLVKSIEQAADELLRTRPAAEAKKLKGVPRNALLKPADAEHRLG 1158
Query: 1148 PDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI-- 1205
+ F L DRVV ++ VP+ RGTI+G+ + TS + D+VFD F G +
Sbjct: 1159 ---NQSFSLGDRVVYAQESGKVPIATRGTIVGLTR--TSRTLLLDIVFDVSFMSGTTLGD 1213
Query: 1206 RCSESRGYRMPAQAMINLS 1224
RCS RG +PA ++N++
Sbjct: 1214 RCSPFRGSTVPASCVLNVT 1232
>gi|225684905|gb|EEH23189.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb03]
Length = 1445
Score = 398 bits (1022), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/442 (47%), Positives = 282/442 (63%), Gaps = 77/442 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHRDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------TFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I + PKKLFFMAIDGVAPRAKMNQQR RRFR+A +AEV ++KA +
Sbjct: 65 -------FNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTAYDAEVAKEKAIK 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L QQL+YF+ K++ D W+ V ++L
Sbjct: 118 QGIEMPKEAAFDSNCITPGTEFMAKLTQQLKYFINKKVSEDV---------EWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++P Y+P++RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRQTKAQPGYHPDVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S K ++ E F+L+HL ++R+YLELEF +L+E L FPF +E IIDD++
Sbjct: 229 TFGRQSQKKSKEL---EHQNFYLMHLCMVREYLELEFQELEEEDALQFPFDLERIIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL ++K+Y++VLP L GYINE G +NL+R L L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGILLDSL 345
Query: 419 ASFDFEQFREKYADIQYLEGKM 440
+ +F F +Y+D ++++ K+
Sbjct: 346 SDVEFRFFEAEYSDARWIKSKI 367
Score = 345 bits (884), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 236/743 (31%), Positives = 377/743 (50%), Gaps = 43/743 (5%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K +YY K + +E +R E Y++ +QW L+YYY G SW W+Y +HY+P
Sbjct: 515 KFQEWKNNYYKSKFRWGMDNHEEMRKLTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPM 574
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K ++ +++G+PF PFQQL+ VLP SK+++P + LMT SPI+++YP +
Sbjct: 575 ISDVKLGLKADMNFDLGQPFHPFQQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRD 634
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---N 679
F D+NGKK DWEAVV IPFI+E +L+KAM EHLLT EE++RN G L +TYS
Sbjct: 635 FELDMNGKKMDWEAVVKIPFIEEKRLLKAMATKEHLLTPEEKARNEFGVTLKFTYSPDIE 694
Query: 680 VNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKH 738
++L FP I H +E D + + GL + V L + FP+LK
Sbjct: 695 YIYPSSLV-GVFPDIARCHCIENVF--DLPTMDGLEPFVGLVEGVKLGHEALAGFPSLKT 751
Query: 739 VQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRV 798
+ ++ V VFQQ SRNES+++ + + S ++A Q LG+ + + YP L E +V
Sbjct: 752 LPHHGQLSFHGVSVFQQESRNESMVVTLTEPENRSSVELAKQKLGQRVHVGYPFLQEAKV 811
Query: 799 QAVATKD-SRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYG 857
V+ + + D V + ++ + I Y +LG+ +G E +V+
Sbjct: 812 TRVSDELFDYMCVDGEQHVVSIPHTPSQANQWKRKAEQIESYYSKRLGMIVGEIESMVHV 871
Query: 858 QPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQ------ARESLEYKTIDEI 910
Q + + +G ++ I T YA Q V + RE+L ++E
Sbjct: 872 QML--KGLIKTDQGATVKEFADIPGIETDYALQLVVDRVMCEDNRFIEREAL---PVEEE 926
Query: 911 FYPGCQCFALSNPHYGSGGCVISTVKEENSFIK--LSFKVQQEPDLSDLVHLQDDTVYNY 968
F G + F L +YG+ + EN + +S +EP+ + + Y
Sbjct: 927 FPEGTRAFFLGEYNYGA---PVHITGHENGKLSGLVSVVKAKEPEFGRDLTRSAARISPY 983
Query: 969 LPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDE 1028
PS+ +A L ++PL L++ T S +I +R N+GLN+KF K +V+G++RR
Sbjct: 984 SPSFAIARSLHLNPLTLAKITSSFTVILD----GQRINLGLNLKFEAKKLKVLGYSRRGP 1039
Query: 1029 TTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWL 1087
T W ++E+ L++ YM +FPE ++ D + D +P + ++ +I +WL
Sbjct: 1040 TG--WEFSEKATNLLQQYMIKFPEFIAGIQRKPQGDGFQATDFYPAEIASAKIKEIQAWL 1097
Query: 1088 KEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKV----EKQITLFVKPNKLYIPKPTL 1143
K E P A +D+ +V IEHA D + E + V N L P
Sbjct: 1098 KSIEAKNFERVPLEAEQLDSDLVKSIEHAADELVRTRPEPEPKKMRGVPRNALLKPSDAE 1157
Query: 1144 DKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGV 1203
+L + F L DRV+ +++ VP+ RGT++G+++ TS + D+VFD F G
Sbjct: 1158 HRLG---NQSFSLGDRVIYVQESGKVPIATRGTVVGLMR--TSSTLLLDIVFDVSFMSGT 1212
Query: 1204 KI--RCSESRGYRMPAQAMINLS 1224
+ RCS RG +PA A +NL+
Sbjct: 1213 TLGDRCSLFRGSTVPASAALNLT 1235
>gi|410077707|ref|XP_003956435.1| hypothetical protein KAFR_0C03080 [Kazachstania africana CBS 2517]
gi|372463019|emb|CCF57300.1| hypothetical protein KAFR_0C03080 [Kazachstania africana CBS 2517]
Length = 1499
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/440 (46%), Positives = 274/440 (62%), Gaps = 76/440 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P +S+++ QIPEFDNLYLDMN I+H C+H ND+D R+TE
Sbjct: 1 MGIPKFFRYISERWPMISQLIEGAQIPEFDNLYLDMNSILHTCTHGNDDDVTKRMTE--- 57
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+++F I F ID +
Sbjct: 58 -EEVFAKI-------------FTYIDHL-------------------------------- 71
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
F T+K PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA EKG
Sbjct: 72 ---------FHTIK---PKKVFYMAIDGVAPRAKMNQQRSRRFRTAMDAEAALKKAIEKG 119
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
E +P + FDSN ITPGT FM +L + L+YF+ KI+ D W++V VI SG
Sbjct: 120 EEIPKGEPFDSNAITPGTEFMAKLTKNLKYFIHDKISNDS---------KWREVDVIFSG 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HE PGEGEHKIMD+IR ++S+ DYN N RHC+YGLDADLIMLGL TH P+F+LLREEV F
Sbjct: 171 HEVPGEGEHKIMDFIRNIRSQKDYNNNTRHCIYGLDADLIMLGLSTHAPHFALLREEVVF 230
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
+S+K E F+LLHLSL+R+Y+ELEF ++ + L F + E I+DD++L+
Sbjct: 231 GRRSSKPAPL----EHQNFYLLHLSLLREYMELEFNEIADD--LKFDYDFERILDDFILV 284
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F+IGNDF+PNLPDLH+ GA P+L + ++E L LDGYINE G +NL+R +L L+
Sbjct: 285 MFVIGNDFLPNLPDLHLNKGAFPVLLQTFKEALLHLDGYINENGQINLERLRVWLNYLSQ 344
Query: 421 FDFEQFREKYADIQYLEGKM 440
F+ F + D+++ ++
Sbjct: 345 FELMNFEKNDIDVEWFNQQL 364
Score = 285 bits (728), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 228/769 (29%), Positives = 371/769 (48%), Gaps = 58/769 (7%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCV 549
++E E +T + +F K +YY KL +A+ +E + A+ Y+ +QW L+YYY GC
Sbjct: 497 AEELEREQTLYNEKFQNWKQEYYKDKLGFAQNDSETVTTLAKNYVEGLQWVLYYYYRGCP 556
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMT 609
SW WYY HYAP ISD++ +K++ G PF PF+QL+AVLP SK L+P ++ LM
Sbjct: 557 SWGWYYRDHYAPRISDLEKGLDQIIKFDKGRPFTPFEQLMAVLPERSKNLIPAAFRPLMY 616
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
NSPIL++YP + D NGK DWEAVVL+ F+DE +L+ AM + L+ EE+ RN+
Sbjct: 617 DTNSPILDFYPSQVKLDKNGKTADWEAVVLLTFVDENRLVDAMKPLLSKLSPEEKVRNQF 676
Query: 670 GPMLVYTYSNV--NLGTALAPDYFPAINENHAVEK---PLYRDDIYVHPNKLRKGLCQDV 724
G L + +S NL + F + NH VE+ P D + H L G Q
Sbjct: 677 GTDLKFIFSPQVDNLYKSPLSGIFSDLENNHCVEREYIPKSMDGLSFHYG-LLPGAKQGT 735
Query: 725 NLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVP---SLKQVADQI 781
L + FPTL+ + F +++E + VFQQ SR +S+ + + + +L++++ +
Sbjct: 736 EL---LAGFPTLQTLPFKYQLEYNESLVFQQASRQQSMCLHIEDIYSENNLTLEELSKRY 792
Query: 782 LGKTIFINYPHLIEIRVQAVATKDSRISFD---------KNSGPVFERAAKDMQDA--FQ 830
+ K ++ +P+L E ++ V+ D + F+ K + ER D+QD F+
Sbjct: 793 MNKIVYTRWPYLRESKL--VSVFDENVLFEGKEFVNEKGKKHFKIIERTC-DIQDKKNFE 849
Query: 831 LSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQS 890
K+S+ Y + V + + + +V PV P G +T+ + Y Q
Sbjct: 850 SLKRSMLRNYGKQKAVILNDIKAIVKVLPVTG--LMRTPEGAYV--KTYAETPDHYPLQL 905
Query: 891 AVLNLQQARESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFK 947
V + E + I + F G + L + YG G I E S +K++ K
Sbjct: 906 MVETISNKDERYRERAPVPISQEFPEGSRVIFLGDYAYG-GDTTIDGYSSE-SRLKITVK 963
Query: 948 ---VQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKR 1004
+ EP + D+ + +Y+PSY A KL ++ L LSR T S F+ID + K
Sbjct: 964 KTFSKNEPTIGKERLEIDNKLVHYIPSYVAAKKLDLNKLFLSRIT-SKFLID--DANGKH 1020
Query: 1005 HNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDD 1064
N+G+ +K+ K ++V+G+ RR+ K W Y+ + LI+ Y +FPE F L + +
Sbjct: 1021 VNVGIPVKYENKQQKVLGYARRN--PKGWEYSNLTINLIREYRSRFPEFFRGL-SRTGNG 1077
Query: 1065 IYLRDDVFP----HQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSL---IEHAV 1117
I ++FP +++ +I WLK V ++ + ++ IE
Sbjct: 1078 IPSLQELFPGISTEVAMKKLQEIKDWLKFSEENFVIVSNESDSLTKGSIRAVEDFIEVHS 1137
Query: 1118 DTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTI 1177
E E + V + + P+ + L +F L DRVV I+D VPL +GT+
Sbjct: 1138 SGRENSETKQLTKVPRDAILNPRVSFGLLRTQ---RFNLGDRVVYIQDSGKVPLFSKGTV 1194
Query: 1178 IGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
+G S V+FD G R RG + + ++N++
Sbjct: 1195 VGYTTLGLSLSVQ--VLFDHEIVSGNTFGGRLRTKRGLGLDSSFLLNVT 1241
>gi|108711533|gb|ABF99328.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
Length = 718
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 251/728 (34%), Positives = 370/728 (50%), Gaps = 145/728 (19%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQ--------IP-----------EFDNLYLDMNGII 40
MGVP F+R++++RYP +S+ V E +P EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP T ++F+ IF YI+ LF +++P+KL +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCFHPEGRPAP--TTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AK+A + + + E G
Sbjct: 119 RFRAAKDAADAAAEEERLRKEFEAE----------------------------------G 144
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
R + +++E ++ SN ITPGTPFM L L+Y+++L++
Sbjct: 145 RTLVAKEKSEAID-----------------SNVITPGTPFMFVLSSALQYYIQLRLNHTP 187
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W+ V V+LS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLI
Sbjct: 188 ---------GWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNK---------------GGSQ----IVTP--EETKF 319
ML L THE +FS+LRE + + K G Q + P + K+
Sbjct: 239 MLSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRGSGQADKTVELPPIHKKKY 298
Query: 320 FLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN 379
L++ ++R+YLE + + P F + E ++DD+V M F +GNDF+P++P L I
Sbjct: 299 QFLNIWVLREYLEKDLEIVDPP----FKINFERVVDDFVFMCFFVGNDFLPHMPTLEIRE 354
Query: 380 GALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGK 439
GA+ LL +Y+ ++ GY+ +GG + L R E F+ +A + EQ +K A IQ
Sbjct: 355 GAINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHE-EQIFQKRARIQ----- 408
Query: 440 MGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTN 499
+ + E+ + + + D+ Y D + L Y YY+++
Sbjct: 409 -----KAIQNNEERNRVQTE-----NSEDNQYVDKVK--LGEPGYRVRYYAEK------- 449
Query: 500 FFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHY 559
F E + K ++V RD + Y+ + W + YYY G SW W+YP+HY
Sbjct: 450 -FKEEAELKP------------IDQVQRDVVQKYVEGLCWVMRYYYQGVCSWQWFYPYHY 496
Query: 560 APYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYY 619
AP+ SD+K + L + + +G+PF PF QL+ LPAAS LP+ Y +LM NSP+ +Y
Sbjct: 497 APFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMNDPNSPLKSFY 556
Query: 620 PEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSN 679
P++F D+NGK+ W+ + +PFIDE +L+ +E LTDEER RNR ++Y
Sbjct: 557 PKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETLTDEERFRNRTMFDILYVRET 616
Query: 680 VNLGTALA 687
L +A
Sbjct: 617 HPLAAQIA 624
>gi|425774945|gb|EKV13236.1| Exonuclease Kem1, putative [Penicillium digitatum Pd1]
Length = 1393
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/441 (47%), Positives = 284/441 (64%), Gaps = 77/441 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S ++ E +IPEFD+LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPSISMLIAESRIPEFDSLYLDMNGIIHNCTHSDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + + F+AI
Sbjct: 52 ----------TFRMTEDQ--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PKKLF+MA+DGVAPRAKMNQQR RRFR+A +AE ++KA +
Sbjct: 65 -------FNYIEHLFGKIKPKKLFYMAVDGVAPRAKMNQQRARRFRTALDAENAKEKAIQ 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YF+ KI+ D W+ V ++L
Sbjct: 118 QGLEMPKEDAFDSNCITPGTEFMQKLTKQLKYFINKKISEDT---------DWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++PDY N+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRCSKAQPDYESNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F + +K ++ E F+LLHLS++R+YLELEF +L++ GVL FPF +E +IDD++
Sbjct: 229 TFGRQVSKKSKEL---EHQNFYLLHLSVVREYLELEFQELEQEGVLDFPFDLERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL L++K+Y+EVLP + GYINE G +N++R +T L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALALMFKLYKEVLPKMGGYINEQGVINVQRLGMLVTAL 345
Query: 419 ASFDFEQFREKYADIQYLEGK 439
++ ++ F + +D Q+++ K
Sbjct: 346 SAVEYRFFEAENSDAQWIKSK 366
Score = 329 bits (843), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 241/745 (32%), Positives = 378/745 (50%), Gaps = 45/745 (6%)
Query: 502 SEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAP 561
++F + K YY K + E ++ + Y++ +QW L YYY G SW W++ +HYAP
Sbjct: 501 AKFLEWKDKYYRTKFGWGLDNKEEMKKLTQNYVQGLQWVLFYYYRGIASWPWFFQYHYAP 560
Query: 562 YISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
ISD+ D ++ +++G+PF PF QL+ VLP SK+++P Y +LMT +SPI ++YP
Sbjct: 561 MISDVNDGLGADMDFKLGQPFRPFDQLMGVLPDRSKKIVPTAYWDLMTSPDSPIYDFYPR 620
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NV 680
+F D+NGKK +WEAVV IPFIDE +L+ A+ E L+ +E++RN G L +TYS +V
Sbjct: 621 DFDLDMNGKKMEWEAVVKIPFIDEKRLLDALKTKETQLSADEKARNDFGACLKFTYSPDV 680
Query: 681 N-LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKL-RKGLCQDVNL-KLYVTHFPTLK 737
N + + P FP + H +E D+ V + GL V+L K + FP++K
Sbjct: 681 NFVYPSSMPGVFPDLPSCHCIENLF---DLPVMDGLVPYAGLMDGVHLGKAALAGFPSIK 737
Query: 738 HVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIR 797
+ ++ V VF Q SRNES ++ S ++A LGK + + YP L E
Sbjct: 738 TLPHHGQLGFHGVCVFNQDSRNESQVVTLLDPGSRSSVELAKTKLGKRVHVGYPFLQEAL 797
Query: 798 VQAVATKDSRISFDKNSG---PVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVL 854
V V D + G P+ + ++ I Y +L + IG+ E L
Sbjct: 798 V--VRVSDELFDYVLPVGEEHPLAVPHTPQQIEQWKRKANKIEGTYSKRLAIIIGDVESL 855
Query: 855 VYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSA---VLNLQQARESLEYKTIDEI 910
V+ Q ++ G ++ I T YA Q V+N Q E +I E
Sbjct: 856 VHIQLLKGMSK--TDDGATIKEFAEIPGQETDYALQVVVDDVINPDQRFIEREALSIQEE 913
Query: 911 FYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQDDTVYNYL 969
F G + F L + +YG V E+ L V+ +EP+ + + Y+
Sbjct: 914 FPEGSRAFFLGDFNYGR--PVYVGGHEDGKVNGLVAAVKGREPEFGRERVRASEQLCPYM 971
Query: 970 PSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDET 1029
PSY VA L ++PL+L++ T S F ID EG +R N+GLN+KF K ++V+G++RR E+
Sbjct: 972 PSYAVARSLRLNPLVLAKITSS-FTIDI--EG-QRANLGLNLKFQAKQQKVLGYSRRGES 1027
Query: 1030 TKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWLK 1088
W ++++ V L++ YM +FP+ ++ + D Y D +P + ++ +I WLK
Sbjct: 1028 G--WEFSQKAVELLQQYMIKFPDFIAGIQRNPQSDRYSPTDFYPEEIAALKMKEIKEWLK 1085
Query: 1089 EQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLY-IPKPTLDKLC 1147
E P A +D+ +V LIEH D + + +P K+ +P+ L L
Sbjct: 1086 SIEAKNFERVPLDAEQLDSDIVMLIEHDADILNASQPDM----QPKKVRGVPRSAL--LR 1139
Query: 1148 PD------PDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPH 1201
P + FKL DRVV +D VP+ RGT++G+ + TS + DVVFD F
Sbjct: 1140 PADVEHRLGNQSFKLGDRVVYAQDSGKVPIATRGTVVGLTR--TSRALLLDVVFDVSFMS 1197
Query: 1202 GVKI--RCSESRGYRMPAQAMINLS 1224
G + RCS RG + A +++N+S
Sbjct: 1198 GTTLGGRCSPFRGQTVLASSLLNIS 1222
>gi|425772513|gb|EKV10914.1| Exonuclease Kem1, putative [Penicillium digitatum PHI26]
Length = 1393
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/441 (47%), Positives = 284/441 (64%), Gaps = 77/441 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S ++ E +IPEFD+LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPSISMLIAESRIPEFDSLYLDMNGIIHNCTHSDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + + F+AI
Sbjct: 52 ----------TFRMTEDQ--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PKKLF+MA+DGVAPRAKMNQQR RRFR+A +AE ++KA +
Sbjct: 65 -------FNYIEHLFGKIKPKKLFYMAVDGVAPRAKMNQQRARRFRTALDAENAKEKAIQ 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YF+ KI+ D W+ V ++L
Sbjct: 118 QGLEMPKEDAFDSNCITPGTEFMQKLTKQLKYFINKKISEDT---------DWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++PDY N+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRCSKAQPDYESNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F + +K ++ E F+LLHLS++R+YLELEF +L++ GVL FPF +E +IDD++
Sbjct: 229 TFGRQVSKKSKEL---EHQNFYLLHLSVVREYLELEFQELEQEGVLDFPFDLERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL L++K+Y+EVLP + GYINE G +N++R +T L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALALMFKLYKEVLPKMGGYINEQGVINVQRLGMLVTAL 345
Query: 419 ASFDFEQFREKYADIQYLEGK 439
++ ++ F + +D Q+++ K
Sbjct: 346 SAVEYRFFEAENSDAQWIKSK 366
Score = 328 bits (841), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 241/745 (32%), Positives = 378/745 (50%), Gaps = 45/745 (6%)
Query: 502 SEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAP 561
++F + K YY K + E ++ + Y++ +QW L YYY G SW W++ +HYAP
Sbjct: 501 AKFLEWKDKYYRTKFGWGLDNKEEMKKLTQNYVQGLQWVLFYYYRGIASWPWFFQYHYAP 560
Query: 562 YISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
ISD+ D ++ +++G+PF PF QL+ VLP SK+++P Y +LMT +SPI ++YP
Sbjct: 561 MISDVNDGLGADMDFKLGQPFRPFDQLMGVLPDRSKKIVPTAYWDLMTSPDSPIYDFYPR 620
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NV 680
+F D+NGKK +WEAVV IPFIDE +L+ A+ E L+ +E++RN G L +TYS +V
Sbjct: 621 DFDLDMNGKKMEWEAVVKIPFIDEKRLLDALKTKETQLSADEKARNDFGACLKFTYSPDV 680
Query: 681 N-LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKL-RKGLCQDVNL-KLYVTHFPTLK 737
N + + P FP + H +E D+ V + GL V+L K + FP++K
Sbjct: 681 NFVYPSSMPGVFPDLPSCHCIENLF---DLPVMDGLVPYAGLMDGVHLGKAALAGFPSIK 737
Query: 738 HVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIR 797
+ ++ V VF Q SRNES ++ S ++A LGK + + YP L E
Sbjct: 738 TLPHHGQLGFHGVCVFNQDSRNESQVVTLLDPGSRSSVELAKTKLGKRVHVGYPFLQEAL 797
Query: 798 VQAVATKDSRISFDKNSG---PVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVL 854
V V D + G P+ + ++ I Y +L + IG+ E L
Sbjct: 798 V--VRVSDELFDYVLPVGEEHPLAVPHTPQQIEQWKRKANKIEGTYSKRLAIIIGDVESL 855
Query: 855 VYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSA---VLNLQQARESLEYKTIDEI 910
V+ Q ++ G ++ I T YA Q V+N Q E +I E
Sbjct: 856 VHIQLLKGMSK--TDDGATIKEFAEIPGQETDYALQVVVDDVINPDQRFIEREALSIQEE 913
Query: 911 FYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQDDTVYNYL 969
F G + F L + +YG V E+ L V+ +EP+ + + Y+
Sbjct: 914 FPEGSRAFFLGDFNYGR--PVYVGGHEDGKVNGLVAAVKGREPEFGRERVRVSEQLCPYM 971
Query: 970 PSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDET 1029
PSY VA L ++PL+L++ T S F ID EG +R N+GLN+KF K ++V+G++RR E+
Sbjct: 972 PSYAVARSLRLNPLVLAKITSS-FTIDI--EG-QRANLGLNLKFQAKQQKVLGYSRRGES 1027
Query: 1030 TKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWLK 1088
W ++++ V L++ YM +FP+ ++ + D Y D +P + ++ +I WLK
Sbjct: 1028 G--WEFSQKAVELLQQYMIKFPDFIAGIQRNPQSDRYSPTDFYPEEIAALKMKEIKEWLK 1085
Query: 1089 EQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLY-IPKPTLDKLC 1147
E P A +D+ +V LIEH D + + +P K+ +P+ L L
Sbjct: 1086 SIEAKNFERVPLDAEQLDSDIVMLIEHDADILNASQPDM----QPKKVRGVPRSAL--LR 1139
Query: 1148 PD------PDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPH 1201
P + FKL DRVV +D VP+ RGT++G+ + TS + DVVFD F
Sbjct: 1140 PADVEHRLGNQSFKLGDRVVYAQDSGKVPIATRGTVVGLTR--TSRALLLDVVFDVSFMS 1197
Query: 1202 GVKI--RCSESRGYRMPAQAMINLS 1224
G + RCS RG + A +++N+S
Sbjct: 1198 GTTLGGRCSPFRGQTVLASSLLNIS 1222
>gi|108711532|gb|ABF99327.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
Length = 682
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 251/728 (34%), Positives = 368/728 (50%), Gaps = 145/728 (19%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQ--------IP-----------EFDNLYLDMNGII 40
MGVP F+R++++RYP +S+ V E +P EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP T ++F+ IF YI+ LF +++P+KL +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCFHPEGRPAP--TTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AK+A + + + E G
Sbjct: 119 RFRAAKDAADAAAEEERLRKEFEAE----------------------------------G 144
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
R + +++E ++ SN ITPGTPFM L L+Y+++L++
Sbjct: 145 RTLVAKEKSEAID-----------------SNVITPGTPFMFVLSSALQYYIQLRLNHTP 187
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W+ V V+LS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLI
Sbjct: 188 ---------GWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNK---------------GGSQIVTPEET------KF 319
ML L THE +FS+LRE + + K G Q E K+
Sbjct: 239 MLSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRGSGQADKTVELPPIHKKKY 298
Query: 320 FLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN 379
L++ ++R+YLE + + P F + E ++DD+V M F +GNDF+P++P L I
Sbjct: 299 QFLNIWVLREYLEKDLEIVDPP----FKINFERVVDDFVFMCFFVGNDFLPHMPTLEIRE 354
Query: 380 GALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGK 439
GA+ LL +Y+ ++ GY+ +GG + L R E F+ +A + EQ +K A IQ
Sbjct: 355 GAINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHE-EQIFQKRARIQ----- 408
Query: 440 MGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTN 499
+ + E+ + + + D+ Y D + L Y YY+++
Sbjct: 409 -----KAIQNNEERNRVQTE-----NSEDNQYVDKVK--LGEPGYRVRYYAEK------- 449
Query: 500 FFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHY 559
F E + K ++V RD + Y+ + W + YYY G SW W+YP+HY
Sbjct: 450 -FKEEAELKP------------IDQVQRDVVQKYVEGLCWVMRYYYQGVCSWQWFYPYHY 496
Query: 560 APYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYY 619
AP+ SD+K + L + + +G+PF PF QL+ LPAAS LP+ Y +LM NSP+ +Y
Sbjct: 497 APFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMNDPNSPLKSFY 556
Query: 620 PEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSN 679
P++F D+NGK+ W+ + +PFIDE +L+ +E LTDEER RNR ++Y
Sbjct: 557 PKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETLTDEERFRNRTMFDILYVRET 616
Query: 680 VNLGTALA 687
L +A
Sbjct: 617 HPLAAQIA 624
>gi|195038968|ref|XP_001990842.1| GH18033 [Drosophila grimshawi]
gi|193895038|gb|EDV93904.1| GH18033 [Drosophila grimshawi]
Length = 873
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 255/736 (34%), Positives = 367/736 (49%), Gaps = 131/736 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S++YPC +I C+ DP T K I
Sbjct: 1 MGVPAFFRWLSKKYPC----------------------VIIECNENKQVDPD---TGKNI 35
Query: 61 FQDIFHYIEILFRMIQPKKL----FFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 116
++D + P + ++ ++G+ E K
Sbjct: 36 YEDA--------TLPNPNGVEFDNLYLDMNGII----------------HPCTHPEDKPA 71
Query: 117 EKGERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA----- 169
K E F+ I F P+KL +MAIDGVAPRAKMNQQR RRFR+AKEA
Sbjct: 72 PKNEEEMMIAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKEATEKRL 131
Query: 170 --EVLEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWK 223
E + + +G +LP EK FDSNCITPGTPFM RL + L Y++ ++ +
Sbjct: 132 EIERIRDELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYIHDRLNNNP--- 188
Query: 224 DTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLG 283
WK V +ILS PGEGEHKIMDYIR +++PD++PN H L G DADLIMLG
Sbjct: 189 ------AWKGVKIILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLIMLG 242
Query: 284 LCTHEPYFSLLREEV------------KFNTKSNK-------GGSQIVTP------EETK 318
L THEP F+++REE +F + +K G + I +P E K
Sbjct: 243 LATHEPNFTIIREEFLPNKPRPCDVCNQFGHEMDKCVGLSAVGSNNINSPPDVPIGAEVK 302
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
F + LS++R+YL K E L F + E +DDWV M F +GNDF+P+LP L I
Sbjct: 303 FIFVRLSVLREYLR----KTLEMPNLPFSYDFERALDDWVFMCFFVGNDFLPHLPSLEIR 358
Query: 379 NGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEG 438
GA+ L ++Y++ + Y+ G ++L R + +T L + + + F+++ Q +
Sbjct: 359 EGAVDRLVELYKKCVYKARDYLTNSGDVSLDRVQLIMTDLGNVEDQIFKDRQRREQQYKA 418
Query: 439 KMGKK---------FSDVFHKEKSKEMDPDL------AALIKATDDDYDDGTEEVLNYAN 483
+ ++ F + + +D + A+ ++ +D GT+ AN
Sbjct: 419 RQKRENHKALEQSAFGPMAVGRNNAAVDKIITNYKQEASAVRMGSND-SQGTKRSSTNAN 477
Query: 484 YE---EYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
+ E +DE W F K YY K D A + A Y+R + W
Sbjct: 478 LDDADEEENNDEVRLWEDGF-------KNRYYESKFDVASGNLQFRYAVALQYVRGLCWV 530
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPFQQLLAVLPAASKEL 599
L YYY GC SW+WY+P+HYAP+ SD + L+ +E G +PF P +QL+ V PAAS
Sbjct: 531 LKYYYQGCASWNWYFPYHYAPFASDFVNIQGLSTTFEKGTKPFNPLEQLMGVFPAASSSH 590
Query: 600 LPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLL 659
+PEP+ LM+ S I+++YPE+F DLNGKK W+ V L+PF+DE +L KA+ + L
Sbjct: 591 VPEPWAQLMSKPESTIIDFYPEDFKIDLNGKKFAWQGVALLPFVDENRLFKALGPLHIQL 650
Query: 660 TDEERSRNRHGPMLVY 675
TDEE RN+ G +Y
Sbjct: 651 TDEEVQRNKRGDNNLY 666
>gi|413932824|gb|AFW67375.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 652
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 255/717 (35%), Positives = 366/717 (51%), Gaps = 145/717 (20%)
Query: 1 MGVPKFFRYISERYPCL---------------SEVVREYQIP-----EFDNLYLDMNGII 40
MGVP F+R++++RYP + V + + P EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP T ++F+ IF YI+ LF +I+P+KL +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCFHPEGRPAP--TTYDEVFKSIFDYIDHLFGLIRPRKLLYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AK+A + + K F+
Sbjct: 119 RFRAAKDAADAAAEEER------LRKEFE------------------------------- 141
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
E L QK K + DSN ITPGT FM L L+Y+++L++
Sbjct: 142 ------AEGRTLAQKEKSEA--------IDSNVITPGTEFMFVLSTALQYYIQLRLN--- 184
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
TL W+ V +ILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLI
Sbjct: 185 ---HTLG---WQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNK---------------GGSQ----IVTP--EETKF 319
ML L THE +FS+LRE + + K G SQ + P + K+
Sbjct: 239 MLALATHEVHFSILREVISMPGQHEKCFLCGQVGHLAAECRGPSQPDNSVELPPIHKKKY 298
Query: 320 FLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN 379
L++ ++R+YL + + P F + E +IDD+V M F +GNDF+P++P L I
Sbjct: 299 QFLNIWVLREYLAKDLEIIDAP----FKINFERLIDDFVFMCFFVGNDFLPHMPTLEIRE 354
Query: 380 GALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGK 439
GA+ LL +Y+ ++ GY+ + G + L R E F+ +A + EQ +K A IQ + +
Sbjct: 355 GAINLLMSIYRSEFTSMGGYLTDVGEVILDRVEHFIQSVAVNE-EQIFQKRARIQ--QAR 411
Query: 440 MGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTN 499
+ +E S+E D Y D + L Y E YY+D+
Sbjct: 412 ENNEEKHKMQRENSEE-------------DQYVDKVK--LGEPGYRERYYADK------- 449
Query: 500 FFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHY 559
F E + +K +V RD + Y+ + W + YYY G SW W+YP+HY
Sbjct: 450 -FKEEAE------------SKPIVQVRRDVVQKYVEGLCWVMRYYYQGVCSWQWFYPYHY 496
Query: 560 APYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYY 619
AP+ SD+K + L + + +G+PF PF QL+ LPAAS LP+ Y +LM+ +SP+ +Y
Sbjct: 497 APFASDLKGLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMSDPDSPLKSFY 556
Query: 620 PEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
P++F D+NGK+ W+ V +PFIDE +L+ +E LT+EE+ RNR ++Y
Sbjct: 557 PKDFEIDMNGKRFAWQGVAKLPFIDERRLLAETRKLEDTLTEEEKFRNRTMLDIIYV 613
>gi|15221841|ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
gi|75262833|sp|Q9FQ04.1|XRN4_ARATH RecName: Full=5'-3' exoribonuclease 4; AltName: Full=Protein ACC
INSENSITIVE 1; AltName: Full=Protein ETHYLENE
INSENSITIVE 5; AltName: Full=Protein EXORIBONUCLEASE 4
gi|11875626|gb|AAG40731.1|AF286718_1 XRN4 [Arabidopsis thaliana]
gi|17381112|gb|AAL36368.1| putative exonuclease [Arabidopsis thaliana]
gi|20259665|gb|AAM14350.1| putative exonuclease [Arabidopsis thaliana]
gi|109627646|gb|ABG34298.1| At1g54490 [Arabidopsis thaliana]
gi|332194988|gb|AEE33109.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
Length = 947
Score = 395 bits (1016), Expect = e-106, Method: Compositional matrix adjust.
Identities = 255/725 (35%), Positives = 372/725 (51%), Gaps = 145/725 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQ--------IP-----------EFDNLYLDMNGII 40
MGVP F+R++++RYP +S+VV E IP EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP T +F+ +F YI+ LF +++P+K+ ++AIDGVAPRAKMNQQR R
Sbjct: 61 HPCFHPEGKPA--PATYDDVFKSMFEYIDHLFTLVRPRKILYLAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AK+A E + +
Sbjct: 119 RFRAAKDAAEAEAEEE-------------------------------------------- 134
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
R R E E AKEK E DSN ITPGTPFM L L+Y+++ ++ +
Sbjct: 135 -RLRKDFEMEGQILSAKEKAETC------DSNVITPGTPFMAILSVALQYYIQSRLNHNP 187
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W+ V VILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLI
Sbjct: 188 ---------GWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
Query: 281 MLGLCTHEPYFSLLREEVKF----------------------NTKSNKGGSQIVTPEETK 318
ML L THE +FS+LRE + + + SN + I + K
Sbjct: 239 MLSLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSNNAAADIPI-HKKK 297
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
+ L++ ++R+YL+ E P +++F E IIDD+V + F +GNDF+P++P L I
Sbjct: 298 YQFLNIWVLREYLQYELAIPDPPFMINF----ERIIDDFVFLCFFVGNDFLPHMPTLEIR 353
Query: 379 NGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEG 438
GA+ LL VY++ + GY+ + G + L R E F+ +A + + F+++ Q ++
Sbjct: 354 EGAINLLMHVYRKEFTAMGGYLTDSGEVLLDRVEHFIQAVAVNEDKIFQKRTRIKQSMD- 412
Query: 439 KMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRT 498
++ K++S+ DP + + DD + L Y+E YY+++
Sbjct: 413 ------NNEEMKQRSRR-DPS-----EVPPEPIDDKIK--LGEPGYKERYYAEK------ 452
Query: 499 NFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHH 558
FS +T+ ++ +D Y+ + W YYY G SW W+YP+H
Sbjct: 453 --FSTTNPEETE-------------QIKQDMVLKYVEGLCWVCRYYYQGVCSWQWFYPYH 497
Query: 559 YAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEY 618
YAP+ SD+K+ L + + +GEPF PF QL+ LPAAS LP Y+ LMT +SPIL++
Sbjct: 498 YAPFASDLKNLPDLEITFFIGEPFKPFDQLMGTLPAASSNALPGEYRKLMTDPSSPILKF 557
Query: 619 YPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS 678
YP +F D+NGK+ W+ + +PFI+E L+ A +E LT EE+ RN L+Y +
Sbjct: 558 YPADFELDMNGKRFAWQGIAKLPFIEEKLLLAATRKLEETLTVEEQQRNSVMLDLLYVHP 617
Query: 679 NVNLG 683
LG
Sbjct: 618 AHPLG 622
>gi|237835011|ref|XP_002366803.1| 5'-3' exonuclease, putative [Toxoplasma gondii ME49]
gi|211964467|gb|EEA99662.1| 5'-3' exonuclease, putative [Toxoplasma gondii ME49]
gi|221503733|gb|EEE29417.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii VEG]
Length = 2042
Score = 395 bits (1015), Expect = e-106, Method: Compositional matrix adjust.
Identities = 247/736 (33%), Positives = 358/736 (48%), Gaps = 164/736 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+ +F+R++SERYP ++E + + +PEFDNLYLDMNGI+H CSH N +E +
Sbjct: 1 MGIGRFYRWLSERYPLINEKITQTSLPEFDNLYLDMNGILHTCSHGNSGG-MLHTSEDAM 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+F ++++ + PKK +A DGVAPRAKMNQQR RR+R+AK+A L ++ +E
Sbjct: 60 WVDVFAALDLIISTVNPKKFLVLAADGVAPRAKMNQQRARRYRAAKDAAELARQKEE--H 117
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
RL + QR + +AK+ EK
Sbjct: 118 RL--------------------------------LKMQRKQDKAAAKQ---------EKN 136
Query: 181 ERLPT-EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILS 239
PT FDSNCI+PGT FM + + LR+F + K+ D WKD+ V+LS
Sbjct: 137 LSAPTPGGHFDSNCISPGTEFMAKFFRHLRFFCEKKLNEDAR---------WKDLKVVLS 187
Query: 240 GHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK 299
G + PGEGEHKIM +IR KS P N+RHCLYGLDADLIML L +HEP+F LLREEV
Sbjct: 188 GPDVPGEGEHKIMQFIRCAKSDPHTGRNVRHCLYGLDADLIMLSLASHEPHFCLLREEVV 247
Query: 300 FNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKL-------KE------------ 340
F ++G + + LLH+SL+R+YL LEF KE
Sbjct: 248 FGKAVSRGPQDRMLTKRENLQLLHISLLREYLFLEFAAAALRSTPPKESDEHPKRSETAS 307
Query: 341 -----------------PGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
P +L +P E IIDD+VL F++GNDF+P+ I +G L
Sbjct: 308 TSEADALDTKAAAIALCPSLL-YPRERERIIDDYVLFCFMVGNDFLPHPKATDIADGGLD 366
Query: 384 LLYKVYQEVL----------PTLDG-YINEG-GYLNLKRFEKFLTKLA-SFDFEQFREKY 430
LL Y+E L P+ +G +++ G G +N F FL+ + + + +E
Sbjct: 367 LLMSCYKEYLQRYAVLAEQAPSREGPWLSTGCGQINFCNFFLFLSLFVDTVETDLLQEWA 426
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYS 490
AD Q+++ K K S+V + + D LA Y E +Y
Sbjct: 427 ADSQWMKSKRRNK-SEVEEERRPASEDALLA----------------------YRESFY- 462
Query: 491 DEDEEWRTNFFSEFGQ-HKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNG-- 547
+ G T ++D V Y+ +QW L+YYY G
Sbjct: 463 ----------LKKMGMDASTPEGRKQIDRLAVD----------YLEGLQWVLYYYYRGPQ 502
Query: 548 CVSWSWYYPHHYAPYISDI-------------KDFSHLNLKYEMGEPFLPFQQLLAVLPA 594
W+W+YPHHYAP+++D+ D +++ +P+ PF QLL++LP
Sbjct: 503 YSGWTWFYPHHYAPFMTDVLSCSFFTEGVKQLADLRRKEIRFPASKPYAPFMQLLSILPP 562
Query: 595 ASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDA 654
S LLP+ + ++ +L Y+P++F D+ G W V L+PFIDE+ L +
Sbjct: 563 KSASLLPKALRPILLSPTPELLPYFPDDFEVDMEGCTVSWGGVTLLPFIDEILLHREALP 622
Query: 655 VEHLLTDEERSRNRHG 670
+ LT EE+ RN G
Sbjct: 623 LFSKLTGEEQQRNTRG 638
>gi|221485905|gb|EEE24175.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 2042
Score = 394 bits (1013), Expect = e-106, Method: Compositional matrix adjust.
Identities = 247/736 (33%), Positives = 358/736 (48%), Gaps = 164/736 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+ +F+R++SERYP ++E + + +PEFDNLYLDMNGI+H CSH N +E +
Sbjct: 1 MGIGRFYRWLSERYPLINEKITQTSLPEFDNLYLDMNGILHTCSHGNSGG-MLHTSEDAM 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+F ++++ + PKK +A DGVAPRAKMNQQR RR+R+AK+A L ++ +E
Sbjct: 60 WVDVFAALDLIISTVNPKKFLVLAADGVAPRAKMNQQRARRYRAAKDAAELARQKEE--H 117
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
RL + QR + +AK+ EK
Sbjct: 118 RL--------------------------------LKMQRKQDKAAAKQ---------EKN 136
Query: 181 ERLPT-EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILS 239
PT FDSNCI+PGT FM + + LR+F + K+ D WKD+ V+LS
Sbjct: 137 LSAPTPGGHFDSNCISPGTEFMAKFFRHLRFFCEKKLNEDAR---------WKDLKVVLS 187
Query: 240 GHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK 299
G + PGEGEHKIM +IR KS P N+RHCLYGLDADLIML L +HEP+F LLREEV
Sbjct: 188 GPDVPGEGEHKIMQFIRCAKSDPHTGRNVRHCLYGLDADLIMLSLASHEPHFCLLREEVV 247
Query: 300 FNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKL-------KE------------ 340
F ++G + + LLH+SL+R+YL LEF KE
Sbjct: 248 FGKAVSRGPQDRMLTKRENLQLLHISLLREYLFLEFAAAALRSTPPKESDEHPKRSETAS 307
Query: 341 -----------------PGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
P +L +P E IIDD+VL F++GNDF+P+ I +G L
Sbjct: 308 TSEADALDTKAAAIALCPSLL-YPRERERIIDDYVLFCFMVGNDFLPHPKATDIADGGLD 366
Query: 384 LLYKVYQEVL----------PTLDG-YINEG-GYLNLKRFEKFLTKLA-SFDFEQFREKY 430
LL Y+E L P+ +G +++ G G +N F FL+ + + + +E
Sbjct: 367 LLMSCYKEYLQRYAVLAEQAPSREGPWLSTGCGQINFCNFFLFLSLFVDTVETDLLQEWA 426
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYS 490
AD Q+++ K K S+V + + D LA Y E +Y
Sbjct: 427 ADSQWMKSKRRNK-SEVEEERRPASEDALLA----------------------YRESFY- 462
Query: 491 DEDEEWRTNFFSEFGQ-HKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNG-- 547
+ G T ++D V Y+ +QW L+YYY G
Sbjct: 463 ----------LKKMGMDASTPEGRKQIDRLAVD----------YLEGLQWVLYYYYRGPQ 502
Query: 548 CVSWSWYYPHHYAPYISDI-------------KDFSHLNLKYEMGEPFLPFQQLLAVLPA 594
W+W+YPHHYAP+++D+ D +++ +P+ PF QLL++LP
Sbjct: 503 YSGWTWFYPHHYAPFMTDVLSCSFFTEGVKQLADLRRKEIRFPASKPYAPFMQLLSILPP 562
Query: 595 ASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDA 654
S LLP+ + ++ +L Y+P++F D+ G W V L+PFIDE+ L +
Sbjct: 563 KSASLLPKALRPILLSPTPELLPYFPDDFEVDMEGCTVSWGGVTLLPFIDEMLLHREALP 622
Query: 655 VEHLLTDEERSRNRHG 670
+ LT EE+ RN G
Sbjct: 623 LFSKLTGEEQQRNTRG 638
>gi|294872967|ref|XP_002766468.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239867348|gb|EEQ99185.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 649
Score = 394 bits (1013), Expect = e-106, Method: Compositional matrix adjust.
Identities = 260/700 (37%), Positives = 368/700 (52%), Gaps = 130/700 (18%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP+F+R++SERYP ++EV+ QIPEFD LYLDMNGIIH+CSH + P E ++
Sbjct: 1 MGVPRFYRWLSERYPLINEVIEPEQIPEFDCLYLDMNGIIHHCSH--GDTPDVAKPEDEV 58
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ DIF YI LF I+PKKL +MA+DGVAPRAKMNQQR RRFR+A +A ++A + G+
Sbjct: 59 WMDIFKYISDLFTHIKPKKLLYMAVDGVAPRAKMNQQRSRRFRTALDAVEATERAVKNGD 118
Query: 121 RLPTEKRFDFITLKFCFPKKL-FFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 179
PK + F + + P G F
Sbjct: 119 H----------------PKSIDTFFDSNSITP--------GTAFM--------------- 139
Query: 180 GERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILS 239
ERL + RF F + I+ + LW + V V++S
Sbjct: 140 -ERLTVQLRF---------------------FAQKMISENPLW---------QGVEVVVS 168
Query: 240 GHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK 299
G PGEGEHKIMDYIR KS+PDY+PN RHC+YGLDADLIML L THEPY +LLREEV
Sbjct: 169 GPNVPGEGEHKIMDYIRATKSQPDYDPNTRHCVYGLDADLIMLSLATHEPYVALLREEVI 228
Query: 300 FNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVL 359
F + + +V P+ + LLH+ ++R+YL LEFG+ +E +IDD+VL
Sbjct: 229 FGPEKTDARA-LVRPDRLQ--LLHIYVLREYLALEFGEE----------DLERVIDDFVL 275
Query: 360 MGFLIGNDFIPNLPDLHIINGALPLLYKVYQEV----LPTLDGYINE-GGYLNLKRFEKF 414
L+GNDF+P+LP + +G L L+ Y+E + + D ++ E GG +N F ++
Sbjct: 276 FCMLVGNDFLPHLPYTGVGDGGLERLFSAYKEYREKQISSADPWLVEHGGGINWANFLQY 335
Query: 415 LTKLASFDFEQFREKYADIQYLEGKMGKK--FSDVFHKEKSKEMDPDLAALIKATDDDYD 472
LT +S + + ++ + + G ++ FS +H + E + Y+
Sbjct: 336 LTVYSSSEEKFLADEVSKGHWQIGSERERILFSP-YHTFFNSERRRCGGNGRGGSHMSYE 394
Query: 473 DGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAEC 532
Y + Y EE R F+ G+ D A+V +E++RD
Sbjct: 395 --------YQLKTGFGYPKSPEEARLQFYKVKGECD--------DKAEV-DELVRD---- 433
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPY----ISDIKDF--SHLNLKYEMGEPFLPFQ 586
Y+ +QW+ YYY G SW WYY HHYAP+ ++D DF + +K++ G P PFQ
Sbjct: 434 YLEGLQWSYSYYYRGPPSWHWYYRHHYAPFVCTMVNDFDDFVTAGGQIKFDGGGPVTPFQ 493
Query: 587 QLLAVLPAAS-KELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDE 645
QL+ VLPA+S + LLP+ + L T +SP+ +YYPE F D++G K W LI F+DE
Sbjct: 494 QLMTVLPASSGQRLLPKIFAKLFTSSSSPVKQYYPERFDIDIDGVKVPWGGTTLINFVDE 553
Query: 646 VKLIKAMDAV--------EHLLTDEERSRNRHGPMLVYTY 677
L AM+A + LT+ E+ RN +G VY Y
Sbjct: 554 DVLFDAMNAAIAESERTGQDALTEAEKERNVNGGAHVYRY 593
>gi|356576739|ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 931
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 253/731 (34%), Positives = 371/731 (50%), Gaps = 145/731 (19%)
Query: 1 MGVPKFFRYISERYPC-LSEVVREY------QIP-------------EFDNLYLDMNGII 40
MGVP F+R++++RYP +++VV E +P EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP D P T +F+ IF Y++ L+ +++P+KL ++AIDGVAPRAKMNQQR R
Sbjct: 61 HPCFHP-DGKPA-PATYDDVFKSIFDYLDHLYTLVRPRKLLYLAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AK+A E + + RL E
Sbjct: 119 RFRAAKDAAEAEAEEE----RLRKE----------------------------------- 139
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
F+S E +VL K K + DSN ITPGT FM L L+Y+++ ++ +
Sbjct: 140 --FQS--EGKVLSSKDKPETS--------DSNVITPGTQFMVALSVSLQYYIQTRLNHNP 187
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W++T VILS PGEGEHKIM+YIR ++ P +NPN RHCLYGLDADLI
Sbjct: 188 SWRNTK---------VILSDSNAPGEGEHKIMEYIRLQRNLPGFNPNTRHCLYGLDADLI 238
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNKG--------------GSQIVTPEET-----KFFL 321
ML L THE +FS+LRE V + +K TP+++ K+
Sbjct: 239 MLSLATHEVHFSILREVVTLPGQQDKCFLCGQAGHFAADCQAEDFDTPDDSPIHKKKYQF 298
Query: 322 LHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGA 381
L++ ++R+YL+ E P F E ++DD+V + F +GNDF+P++P L I GA
Sbjct: 299 LNIWVLREYLQFELEIPNPP----FEIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGA 354
Query: 382 LPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMG 441
+ LL +Y++ + GY+ + G + L R ++F+ + + +Q +K IQ +
Sbjct: 355 INLLMHIYRKEFTAIGGYLTDAGEVFLDRVQRFI-QFVTVHEDQIFQKRVRIQ-----LA 408
Query: 442 KKFSDVFHKEKSKEM--DPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTN 499
+ ++ EM +P + L K L Y+E YY ++
Sbjct: 409 AENNEEMRARARGEMPGEPRASLLDKVK-----------LGEPGYKERYYVEK------- 450
Query: 500 FFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHY 559
+ + + +++ +D Y+ + W YYY G SW WYYP+HY
Sbjct: 451 --------------FGVSNLEEIDKIKKDIVLKYVEGLCWVCRYYYQGVCSWKWYYPYHY 496
Query: 560 APYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYY 619
AP+ SD KD L + + GEPF PF QL+ LPA+S LP+ Y++LM+ +SPI +Y
Sbjct: 497 APFASDFKDLPDLEINFFPGEPFKPFDQLMGTLPASSSSALPKKYRDLMSDPSSPIFHFY 556
Query: 620 PEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSN 679
P +F D+NGK+ W+ V +PFIDE KL+ A +E LT+EE+ RN L+Y
Sbjct: 557 PADFEIDMNGKRFAWQGVAKLPFIDEKKLLAATRRIEDTLTEEEQLRNSVMLDLLYVNRA 616
Query: 680 VNLGTALAPDY 690
NL + Y
Sbjct: 617 HNLAAHILSYY 627
>gi|357512205|ref|XP_003626391.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355501406|gb|AES82609.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 629
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 254/707 (35%), Positives = 361/707 (51%), Gaps = 152/707 (21%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIP--------------------EFDNLYLDMNGI 39
MGVP F+R++++RYP + +VV E P EFDNLYLDMNGI
Sbjct: 1 MGVPAFYRWLADRYPRSIVDVVEEAPSPSVAGGPPFPVDVSRPNPNGMEFDNLYLDMNGI 60
Query: 40 IHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
IH C HP D P T +F+ +F YI+ LF +++P+KL ++AIDGVAPRAKMNQQR
Sbjct: 61 IHPCFHP-DGKPA-PATYDDVFKSMFDYIDHLFSLVRPRKLLYLAIDGVAPRAKMNQQRS 118
Query: 100 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQR 159
RRFR+AK+A +A+ + ERL E
Sbjct: 119 RRFRAAKDA----AEAEAEEERLRNE---------------------------------- 140
Query: 160 GRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTD 219
A + E+L K K + DSN ITPGTPFM L L+Y+++ ++ +
Sbjct: 141 -----FADQIELLTSKEKTETH--------DSNVITPGTPFMAVLSVALQYYIQTRLNYN 187
Query: 220 KLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADL 279
W++T V+LS PGEGEHKIMDYIR ++ P ++PN RHCLYGLDADL
Sbjct: 188 PGWRNTK---------VMLSDSNVPGEGEHKIMDYIRLQRNLPGFDPNTRHCLYGLDADL 238
Query: 280 IMLGLCTHEPYFSLLREEVKFNTKSNK------------------GGSQIVTP------E 315
IML L THE +FS+LRE + F + K G + + P
Sbjct: 239 IMLSLATHEIHFSILREVITFPGQQEKCYMCGQVGHLAAECRGKPGDNALDWPVDDTPIH 298
Query: 316 ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
+ K+ LH+ ++R+YL+ E P F E I+DD+V + F +GNDF+P++P L
Sbjct: 299 KKKYQFLHIWVLREYLQYELLIPDPP----FEIDFERIVDDFVFLCFFVGNDFLPHMPTL 354
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQY 435
I GA+ LL +Y++ + GY+ + G + L+R E F+ +A + EQ +K IQ
Sbjct: 355 EIREGAVNLLMHIYRKEFTAMGGYLTDAGEVFLERVENFIQCVAVHE-EQIFQKRVRIQ- 412
Query: 436 LEGKMGKKFSDVFHKEKSKEM--DPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDED 493
++F++ EM +P + + K L Y E YY++
Sbjct: 413 ----QSQEFNEGMRARARGEMPEEPRASVVDKVK-----------LGQPGYTERYYAE-- 455
Query: 494 EEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSW 553
+FG + + +D Y+ + W YYY G SW W
Sbjct: 456 ---------KFGASDPE-----------IERIKKDIVLKYVEGLCWVCRYYYQGVCSWQW 495
Query: 554 YYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENS 613
YYP+HYAP+ SD+KD + L + + MGEPF PF QL+ LP++S LPE Y++LM +S
Sbjct: 496 YYPYHYAPFASDLKDLADLEITFFMGEPFRPFDQLMGTLPSSSSSALPERYRDLMINPSS 555
Query: 614 PILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
PIL++YP +F D+NGKK W+ V +PFIDE KL+ A +E LT
Sbjct: 556 PILQFYPSDFEIDMNGKKYSWQGVAKLPFIDEKKLLSATRTLEGTLT 602
>gi|294951471|ref|XP_002786997.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239901587|gb|EER18793.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 728
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 257/693 (37%), Positives = 366/693 (52%), Gaps = 130/693 (18%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP+F+R++SERYP ++EV+ QIPEFD LYLDMNGIIH+CSH + P E ++
Sbjct: 1 MGVPRFYRWLSERYPLINEVIEPEQIPEFDCLYLDMNGIIHHCSH--GDTPDVAKPEDEV 58
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ DIF YI LF I+PKKL +MA+DGVAPRAKMNQQR RRFR+A +A ++A + G+
Sbjct: 59 WMDIFKYISDLFTHIKPKKLLYMAVDGVAPRAKMNQQRSRRFRTALDAVEATERAVKNGD 118
Query: 121 RLPTEKRFDFITLKFCFPKKL-FFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 179
PK + F + + P G F
Sbjct: 119 H----------------PKSIDTFFDSNSITP--------GTAFM--------------- 139
Query: 180 GERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILS 239
ERL + RF F + I+ + LW + V V++S
Sbjct: 140 -ERLTVQLRF---------------------FAQKMISENPLW---------QGVEVVVS 168
Query: 240 GHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK 299
G PGEGEHKIMDYIR KS+PDY+PN RHC+YGLDADLIML L THEPY +LLREEV
Sbjct: 169 GPNVPGEGEHKIMDYIRATKSQPDYDPNTRHCVYGLDADLIMLSLATHEPYVALLREEVI 228
Query: 300 FNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVL 359
F + + +V P+ + LLH+ ++R+YL LEFG+ +E +IDD+VL
Sbjct: 229 FGPEKTDARA-LVRPDRLQ--LLHIYVLREYLALEFGEE----------DLERVIDDFVL 275
Query: 360 MGFLIGNDFIPNLPDLHIINGALPLLYKVYQEV----LPTLDGYINE-GGYLNLKRFEKF 414
L+GNDF+P+LP + +G L L+ Y+E + + D ++ E GG +N F ++
Sbjct: 276 FCMLVGNDFLPHLPYTGVGDGGLERLFGAYKEYREKQISSADPWLVEHGGGINWANFLQY 335
Query: 415 LTKLASFDFEQFREKYADIQYLEGKMGKK--FSDVFHKEKSKEMDPDLAALIKATDDDYD 472
LT +S + + ++ + + G ++ FS +H + E + Y+
Sbjct: 336 LTVYSSSEEKFLADEVSKGHWQIGSERERILFSP-YHTFFNSERRRCGGNGRGGSHMSYE 394
Query: 473 DGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAEC 532
Y + Y EE R F+ G+ D A+V +E++RD
Sbjct: 395 --------YQLKTGFGYPKSPEEARLQFYKVKGECD--------DKAEV-DELVRD---- 433
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPY----ISDIKDF--SHLNLKYEMGEPFLPFQ 586
Y+ +QW+ YYY G SW WYY HHYAP+ ++D DF + +K++ G P PFQ
Sbjct: 434 YLEGLQWSYSYYYRGPPSWHWYYRHHYAPFVCTMVNDFDDFVAAGGQIKFDGGGPVTPFQ 493
Query: 587 QLLAVLPAAS-KELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDE 645
QL+ VLPA+S + LLP+ + L T +SP+ +YYPE F D++G K W LI F+DE
Sbjct: 494 QLMTVLPASSGQRLLPKIFAKLFTSSSSPVKQYYPERFDIDIDGVKAPWGGTTLINFVDE 553
Query: 646 VKLIKAMDAV--------EHLLTDEERSRNRHG 670
L AM+A + +LT+ E+ RN +G
Sbjct: 554 DVLFDAMNAAIAESERTGQDVLTEAEKERNVNG 586
>gi|255955773|ref|XP_002568639.1| Pc21g16320 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590350|emb|CAP96529.1| Pc21g16320 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1390
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/441 (47%), Positives = 284/441 (64%), Gaps = 77/441 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S ++ + +IPEFD+LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISMLIADSRIPEFDSLYLDMNGIIHNCTHSDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + + F+AI
Sbjct: 52 ----------TFRMTEDQ--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PKKLF+MA+DGVAPRAKMNQQR RRFR+A +AE ++KA +
Sbjct: 65 -------FNYIEHLFGKIKPKKLFYMAVDGVAPRAKMNQQRARRFRTALDAENAKEKAIQ 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QL+YF+ KI+ D W+ V ++L
Sbjct: 118 QGLEMPKEDPFDSNCITPGTEFMQKLTKQLKYFINKKISEDT---------DWQGVEIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR K++PDY N+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRCSKAQPDYESNVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F + +K ++ E F+LLHLS++R+YLELEF +L++ GVL FPF +E +IDD++
Sbjct: 229 TFGRQVSKKPKEL---EHQNFYLLHLSVVREYLELEFQELEQEGVLDFPFDMERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP+LHI GAL L++K+Y+EVLP + GYINE G +N++R +T L
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALALMFKLYKEVLPKMGGYINEQGVINVQRLGMLVTAL 345
Query: 419 ASFDFEQFREKYADIQYLEGK 439
++ ++ F + +D Q+++ K
Sbjct: 346 SAVEYRFFEAENSDAQWIKSK 366
Score = 330 bits (846), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 245/746 (32%), Positives = 379/746 (50%), Gaps = 47/746 (6%)
Query: 502 SEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAP 561
++F Q K +YY K + E ++ A Y++ +QW L YYY G SW W++ +HYAP
Sbjct: 501 AKFLQWKDNYYRTKFGWGLDNKEEMKKLARNYVQGLQWVLFYYYRGIASWPWFFQYHYAP 560
Query: 562 YISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
ISD+ D ++ +++G+PF PF QL+ VLP SK+++P Y +LMT +SPI ++YP
Sbjct: 561 MISDVNDGLDADMNFKLGQPFRPFDQLMGVLPDRSKKIVPTAYWDLMTSPDSPIYDFYPR 620
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NV 680
+F D+NGKK +WEAVV IPFIDE +L+ A+ E+ L+ +E++RN G L +TYS +V
Sbjct: 621 DFDLDMNGKKMEWEAVVKIPFIDEKRLLDALKTKENQLSADEKARNDFGACLKFTYSPDV 680
Query: 681 N-LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKH 738
N + + P FP + +E D + + GL V+L + + FP++K
Sbjct: 681 NFVYPSSMPGVFPDLPSCRCIENMF--DLPVMDGLEPYAGLMDGVHLGIAALAGFPSIKT 738
Query: 739 VQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRV 798
+ ++ V VF Q SRNES +I S ++A LGK + + YP L E
Sbjct: 739 LPHHGQLGFHGVCVFNQDSRNESQVITLLDPGSRSSIELAKTKLGKRVHVGYPFLQE--- 795
Query: 799 QAVATKDSRISFDKNSGPVFERAAK---DMQDAFQLSKKS--ITDGYYTKLGVDIGNTEV 853
A+ + S FD P E Q Q +K+ I Y +L + IG+ E
Sbjct: 796 -ALVVRVSDELFDYVLPPGEEHPLSIPHTPQQIEQWKRKANKIEGTYSKRLAIIIGDVES 854
Query: 854 LVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQ---SAVLNLQQARESLEYKTIDE 909
LV+ QP++ G ++ I T YA Q V+N Q ++ E
Sbjct: 855 LVHIQPLKGMSK--TEEGATIKEFADIPGQETDYALQVLVDDVINPDQRFIERAALSVQE 912
Query: 910 IFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQDDTVYNY 968
F G + F L + +YG V + E+ L V+ +EP+ + + Y
Sbjct: 913 EFPEGSRAFFLGDFNYGR--PVYVSGHEDGKVNGLVAAVKGREPEFGRERVRVSEQLCPY 970
Query: 969 LPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDE 1028
+PSY VA L ++PL+L++ T S F +D EG +R N+GLN+KF K ++V+G++RR E
Sbjct: 971 MPSYAVARSLRLNPLVLAKITSS-FTVDI--EG-QRANLGLNLKFQAKQQKVLGYSRRGE 1026
Query: 1029 TTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWL 1087
+ W ++ + V LI+ YM FPE ++ + D Y D +P + ++ +I WL
Sbjct: 1027 SG--WEFSHKAVELIQQYMINFPEFIAGIQRNPQSDRYSPTDFYPEEIAALKMKEIKDWL 1084
Query: 1088 KEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLY-IPKPTLDKL 1146
K E P A +D+ +V LIE D + + +P K+ +P+ L L
Sbjct: 1085 KSAEAKNFERVPLDAEQLDSDIVMLIEQDADKLNASQPDM----QPKKVRGVPRSAL--L 1138
Query: 1147 CPD------PDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFP 1200
P + FKL DRVV +D VP+ RGT++G+ + TS + DVVFD F
Sbjct: 1139 RPADVEHRLGNQTFKLGDRVVYAQDSGKVPIATRGTVVGLTR--TSRALLLDVVFDVSFM 1196
Query: 1201 HGVKI--RCSESRGYRMPAQAMINLS 1224
G + RCS RG + A +++NLS
Sbjct: 1197 SGTTLGGRCSPFRGQTVLASSLLNLS 1222
>gi|4585991|gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidopsis thaliana]
Length = 965
Score = 391 bits (1005), Expect = e-105, Method: Compositional matrix adjust.
Identities = 255/725 (35%), Positives = 366/725 (50%), Gaps = 156/725 (21%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQ--------IP-----------EFDNLYLDMNGII 40
MGVP F+R++++RYP +S+VV E IP EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP T +F+ +F YI+ LF +++P+K+ ++AIDGVAPRAKMNQQR R
Sbjct: 61 HPCFHPEGKPA--PATYDDVFKSMFEYIDHLFTLVRPRKILYLAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AK+A E + +
Sbjct: 119 RFRAAKDAAEAEAEEE-------------------------------------------- 134
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
R R E E AKEK E DSN ITPGTPFM L L+Y+++ ++ +
Sbjct: 135 -RLRKDFEMEGQILSAKEKAETC------DSNVITPGTPFMAILSVALQYYIQSRLNHNP 187
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W+ V VILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLI
Sbjct: 188 ---------GWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
Query: 281 MLGLCTHEPYFSLLREEVKF----------------------NTKSNKGGSQIVTPEETK 318
ML L THE +FS+LRE + + + SN + I + K
Sbjct: 239 MLSLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSNNAAADIPI-HKKK 297
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
+ L++ ++R+YL+ E P +++F E IIDD+V + F +GNDF+P++P L I
Sbjct: 298 YQFLNIWVLREYLQYELAIPDPPFMINF----ERIIDDFVFLCFFVGNDFLPHMPTLEIR 353
Query: 379 NGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEG 438
GA+ LL VY++ + GY+ + G +N R E F+ +A E
Sbjct: 354 EGAINLLMHVYRKEFTAMGGYLTDSGEVN--RVEHFIQAVAVN---------------ED 396
Query: 439 KMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRT 498
K+ +K + + K++ DP + + DD + L Y+E YY+++
Sbjct: 397 KIFQKRTRI--KQQRSRRDPS-----EVPPEPIDDKIK--LGEPGYKERYYAEK------ 441
Query: 499 NFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHH 558
FS +T+ ++ +D Y+ + W YYY G SW W+YP+H
Sbjct: 442 --FSTTNPEETE-------------QIKQDMVLKYVEGLCWVCRYYYQGVCSWQWFYPYH 486
Query: 559 YAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEY 618
YAP+ SD+K+ L + + +GEPF PF QL+ LPAAS LP Y+ LMT +SPIL++
Sbjct: 487 YAPFASDLKNLPDLEITFFIGEPFKPFDQLMGTLPAASSNALPGEYRKLMTDPSSPILKF 546
Query: 619 YPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS 678
YP +F D+NGK+ W+ + +PFI+E L+ A +E LT EE+ RN L+Y +
Sbjct: 547 YPADFELDMNGKRFAWQGIAKLPFIEEKLLLAATRKLEETLTVEEQQRNSVMLDLLYVHP 606
Query: 679 NVNLG 683
LG
Sbjct: 607 AHPLG 611
>gi|392884414|gb|AFM91039.1| 5'-3' exoribonuclease 2 [Callorhinchus milii]
Length = 952
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 261/764 (34%), Positives = 365/764 (47%), Gaps = 152/764 (19%)
Query: 1 MGVPKFFRYISERYP-----CLSEVVREYQIPEFDNLYLDMNG--IIHNCSHPNDNDPHF 53
MGVP FFR++S +YP CL E V+E +NG I + S PN N+ F
Sbjct: 1 MGVPAFFRWLSRKYPSIVVHCLEERVKE------------VNGVKIPVDTSKPNPNEVEF 48
Query: 54 RITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQ 113
++ D+ I+ P E
Sbjct: 49 ----DNLYLDMNG---IIHPCTHP----------------------------------EN 67
Query: 114 KAKEKGERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-E 170
KA K E F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE E
Sbjct: 68 KAAPKNEDEMMVAIFEYIDRLFNILRPRRLLYMAIDGVAPRAKMNQQRPRRFRASKEGVE 127
Query: 171 VLEQKAK------EKGERLPTE---KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+L +K + KG L E +RFD NCITPGT FM L + LRY+V ++ D
Sbjct: 128 LLAEKTRMREEVISKGGFLSEEVIKERFDGNCITPGTEFMDNLARSLRYYVADRLNNDP- 186
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
WK++ VILS PGEGEHKIMD+IR +++P+++PN HCL G DADLIM
Sbjct: 187 --------GWKNLTVILSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLCGADADLIM 238
Query: 282 LGLCTHEPYFSLLREEVKFNT---------------------KSNKG-----GSQIVTPE 315
LGL THEP F+++REE K N K +G E
Sbjct: 239 LGLATHEPNFTIIREEFKPNQPRPCALCGQIGHEIKECQGLPKDKQGQFDQFAGNSAGVE 298
Query: 316 ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
E +F + L+++R+YLE E P F F E +DDWV M F +GNDF+P+LP L
Sbjct: 299 EQEFIFIRLTVLREYLERELTMASLP----FTFDFERSVDDWVFMCFFVGNDFLPHLPSL 354
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD--- 432
I GA+ L +Y+ V+ GY+ E G++NL+R + + + + F+++ D
Sbjct: 355 EIREGAIDRLVGIYKNVVHKTGGYLTENGFVNLERVQLIMIAVGEAEDNIFKKRREDDVL 414
Query: 433 ----------------------IQYLEGKMGKKFSD-----------VFHKEKSKEMDPD 459
QY +G+ + + K+ DP
Sbjct: 415 FRQRQKEKNKRLKGNRPSFIPGGQYSPQALGQSSGGGRPQAIQNPRQTAFEMRVKDRDPQ 474
Query: 460 LAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYA 519
A + + DG+ L E SDE++E N K YY K D
Sbjct: 475 NRA--SSQNSANSDGSPVPLGTKRKNE--DSDEEQEPSDNIRLWEEGWKQRYYKNKFDVD 530
Query: 520 KVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG 579
+ R E Y+ + W L YYY GC SW W++P HYAP+ SD D L +E G
Sbjct: 531 ATDAKFRRKVVEAYVEGLCWVLQYYYQGCASWKWFFPFHYAPFASDFTDIKELPTTFEKG 590
Query: 580 -EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVV 638
+PF P +QL+ V PAAS LPE ++ LM+ NS I+++YP++FA DLNGKK W+ V
Sbjct: 591 TKPFKPLEQLMGVFPAASGNFLPETWRYLMSYPNSSIIDFYPDDFALDLNGKKFAWQGVA 650
Query: 639 LIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNL 682
L+PF+DE +L A++ V LT +E RN G +++ ++ L
Sbjct: 651 LLPFVDERRLRGALEKVYPDLTSDETRRNSLGSDILFVANSHKL 694
>gi|224123332|ref|XP_002319052.1| predicted protein [Populus trichocarpa]
gi|222857428|gb|EEE94975.1| predicted protein [Populus trichocarpa]
Length = 965
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 253/722 (35%), Positives = 362/722 (50%), Gaps = 147/722 (20%)
Query: 1 MGVPKFFRYISERYPC-LSEVVRE--------------YQIP-----EFDNLYLDMNGII 40
MGVP F+R +++RYP +S+V+ E P EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRLLADRYPLSISDVIEEEPQEDSNGNSKPIDVSKPNPNGIEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP T +F+ IF YI+ LF +++P+KL FMAIDGVAPRAKMNQQR R
Sbjct: 61 HPCFHPEGKPA--PATYDDVFKSIFAYIDHLFALVRPRKLLFMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AK+A E + + K F+
Sbjct: 119 RFRAAKDAAQAEAEEER------LRKEFE------------------------------- 141
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
E E+L KEK E FDSN ITPGT FM L L+Y+++ ++ +
Sbjct: 142 ------AEGELL--SVKEKPE------TFDSNVITPGTQFMAALSTALQYYIQSRLNHNL 187
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W++T VILS PGEGEHKIM YIR ++ +NPN RHCLY LDADLI
Sbjct: 188 GWQNT---------KVILSDSNVPGEGEHKIMSYIRLQRNLSGFNPNTRHCLYSLDADLI 238
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNK----GGSQIVTPE--------------------- 315
ML L T E +FS+LRE V + +K G + + E
Sbjct: 239 MLSLATREVHFSILREIVTLPGQQDKCFLCGQAGHLAAECRGKQGDDALDWHVVDDTPIH 298
Query: 316 ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
+ K+ L++ ++R+YL+ + L P + F E I+DD+V + F +GNDF+P++P L
Sbjct: 299 KKKYQFLNIWVLREYLQYDLDILNPPFAIDF----ERIVDDFVFLCFFVGNDFLPHMPTL 354
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQY 435
I GA+ LL +Y+ + GY+ G + L + E F+ +A ++ + F+++ Q
Sbjct: 355 EIREGAISLLMHIYRREFSAMGGYLTLAGEVFLDKVEHFIQCVAVYEEQIFQKRTRIQQA 414
Query: 436 LEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEE 495
+ K +E S+ + + +K L Y+E YY+++
Sbjct: 415 FDNNEEMKLKA--RRESSEVIQAPVVDKVK-------------LGEPGYKERYYAEK--- 456
Query: 496 WRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYY 555
F Q + D KV EV+ Y+ + W HYY+ G SW W+Y
Sbjct: 457 -----FELSNQEEID---------KVRKEVVLK----YVEGLCWVCHYYFQGVCSWQWFY 498
Query: 556 PHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPI 615
P HYAP+ SD+KD + L + +GEPF PF QL+ LPAAS LP+ Y+ LMT +SPI
Sbjct: 499 PFHYAPFASDLKDLGEVELNFFIGEPFKPFDQLMGTLPAASSNALPKEYRKLMTNPSSPI 558
Query: 616 LEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
++P +F D+NGK+ W+ + +PFIDE KL+ +E LT+EE+ RNR L+Y
Sbjct: 559 HRFFPSDFEIDMNGKRFAWQGIAKLPFIDERKLLAQTKKLESTLTEEEQIRNRVMLDLLY 618
Query: 676 TY 677
+
Sbjct: 619 IH 620
>gi|256074378|ref|XP_002573502.1| 5'-3' exoribonuclease [Schistosoma mansoni]
gi|350644806|emb|CCD60472.1| 5'-3' exoribonuclease, putative [Schistosoma mansoni]
Length = 928
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 249/746 (33%), Positives = 374/746 (50%), Gaps = 133/746 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + D+ D N + S PN N F
Sbjct: 1 MGVPAFFRWLSMKYPSIVTHCVEKRGSILDD---DGNRSPVDTSEPNPNGEEF------- 50
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+ E K K E
Sbjct: 51 ------------------DNLYLDMNGII----------------HPCTHPENKPAPKTE 76
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-------EV 171
F++I F P+++ +MAIDGVAPRAKMNQQR RRFR+A+EA E
Sbjct: 77 SEMFAAIFEYIDRLFSIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRAAQEAKEKQITIER 136
Query: 172 LEQKAKEKGERLP--TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLW 229
L + +G LP E+ FDSNCITPGTPFM RL LR ++ ++T D WK+ +
Sbjct: 137 LRNELIARGAHLPPPKEEHFDSNCITPGTPFMSRLAVALRGYIYTRLTKDPGWKNLM--- 193
Query: 230 VWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEP 289
V LS PGEGEHKIMD+IR ++ P ++ N +HCL G DADLIMLGL THEP
Sbjct: 194 ------VFLSDANVPGEGEHKIMDFIRRQRNNPTHDANTKHCLCGADADLIMLGLATHEP 247
Query: 290 YFSLLREEVKFNT------------------------KSNKGGSQIVTPEETKFFLLHLS 325
YF+++REE K N SN+G + + + F + L+
Sbjct: 248 YFTIIREEFKPNQPKPCDLCGQMGHEMEDCVGAPKEEDSNEGPPPLPS-GDVDFIFIRLN 306
Query: 326 LMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLL 385
++R YL + LK G+ +F + +E +IDDWV M F +GNDF+P+LP L I GA+ L
Sbjct: 307 VLRQYLAED---LKLAGI-TFEWDLERVIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRL 362
Query: 386 YKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY-ADIQYLEGKMGKKF 444
+Y+ + G++ + G +NL+R + + L + E F+ + +++Q+ K
Sbjct: 363 IDIYKSTVQKTGGWLTDSGRVNLERVQLIMVDLGKMEDEIFKNRRESELQFRNRKRQNSS 422
Query: 445 SDVFHK------------------EKSKEMDP---DLAALIKATDDDYDDGTEEVLNYAN 483
+ +++ +S M+P I + D +E+++ A+
Sbjct: 423 GNGYNRNQRGFAPQRLDHHPSFEVSQSGFMEPIPLKGRHGIAHPKGSHRDDEDEMMDAAD 482
Query: 484 YEEYYYSDEDEEWRTNFF-SEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLH 542
++ ++ WR+ ++ S+FG TD + + KV E Y + W L
Sbjct: 483 EVRFW----EDGWRSRYYQSKFGVDPTDAPGFCI---KVGQE--------YALGLCWVLA 527
Query: 543 YYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGE--PFLPFQQLLAVLPAASKELL 600
YYY GC SW WY+P+HYAP+ SD S L++ + E PF P +QL++V PA S+ +
Sbjct: 528 YYYQGCASWDWYFPYHYAPFASDFSKISELDVDFSKKETKPFRPLEQLMSVFPADSRSHV 587
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P +Q+LMT +SPI+++YP +F DLNGK+ W V L+PF+DEV+L+KA+DA +LLT
Sbjct: 588 PPAWQDLMTDPDSPIIDFYPTDFKIDLNGKRYLWMGVALLPFVDEVRLLKALDARRNLLT 647
Query: 661 DEERSRNRHGPMLVYTYSNVNLGTAL 686
EE RN G ++ ++ G L
Sbjct: 648 KEEVERNVRGSDQLFCRADHPAGPLL 673
>gi|240277600|gb|EER41108.1| exonuclease II Exo2 [Ajellomyces capsulatus H143]
Length = 1138
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/440 (46%), Positives = 280/440 (63%), Gaps = 73/440 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P FR+TE ++
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF+YIE L+ I+PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE+ ++KA ++G
Sbjct: 61 FIAIFNYIEHLYGKIKPKQLFFMAIDGVAPRAKMNQQRARRFRTALDAELAKEKAIKQGI 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+P E+ FD C FM AK+ QQ
Sbjct: 121 EMPKEEAFD----SNCITPGTEFM--------AKLTQQ---------------------- 146
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
L+YF+ K++ D W+ V ++LSG
Sbjct: 147 ---------------------------LKYFINKKVSEDV---------EWQGVEIVLSG 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HE PGEGEHKIM+YIR K++P Y P++RHCLYGLDADLIMLGL +H+P+F LLREEV F
Sbjct: 171 HEVPGEGEHKIMEYIRQSKAQPGYQPDIRHCLYGLDADLIMLGLLSHDPHFCLLREEVTF 230
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
+S K ++ E F+L+HL ++R+YLELEF +L+E L FPF +E +IDD++LM
Sbjct: 231 GRQSQKKSKEL---EHQNFYLMHLCMVREYLELEFQELEEENALQFPFDLERVIDDFILM 287
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F +GNDF+PNLP+LHI GAL ++KVY++VLP L GYINE G +NL+R L L+
Sbjct: 288 AFFVGNDFLPNLPNLHINEGALAWMFKVYKQVLPKLGGYINEQGTINLERLGVLLDSLSD 347
Query: 421 FDFEQFREKYADIQYLEGKM 440
+F F +++D ++++ KM
Sbjct: 348 VEFRFFEAEFSDARWIKSKM 367
Score = 295 bits (754), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 200/638 (31%), Positives = 325/638 (50%), Gaps = 24/638 (3%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K +YY K +A +E +R E Y++ +QW L+YYY G SW W+Y +HY+P
Sbjct: 512 KFQEWKDNYYKSKFGWAMDNHEEMRQLTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPM 571
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K ++ +++G+PF PF+QL+ VLP SK+++P Y LMT SPI+++YP +
Sbjct: 572 ISDVKLGLEADMNFDLGQPFHPFEQLMGVLPDRSKQIVPSAYHELMTSPESPIIDFYPRD 631
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---N 679
F D+NGKK +WEAVV IPFIDE +L+ AM +HLLT EE +RN G L +TYS
Sbjct: 632 FELDMNGKKMEWEAVVKIPFIDEKRLLSAMATKKHLLTPEENARNEFGVTLKFTYSPDIE 691
Query: 680 VNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKH 738
++LA FP I + H +E D + + GL + V L + FP+LK
Sbjct: 692 YIYPSSLA-GVFPDIAKCHCIENVF--DLPTMEGLEPFVGLVEGVKLGHEALAGFPSLKT 748
Query: 739 VQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRV 798
+ ++ V VFQQ SRNES+++ + + S ++A Q LG+ + + YP L E +V
Sbjct: 749 LPHNGQLGFHGVSVFQQESRNESMVVTLSEPENRSSVELAKQKLGQRVHVGYPFLQEAKV 808
Query: 799 QAVATKD-SRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYG 857
V+ + + D V D ++ + Y +LG+ +G E +V+
Sbjct: 809 TRVSDELFDYMHVDGEQHVVSIPHTPSQTDQWRRKAHQVESYYSKRLGMVVGEIESMVHV 868
Query: 858 QPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESL---EYKTIDEIFYP 913
Q + + G ++ I T YA Q V + + E ++E F
Sbjct: 869 QML--KGLMKTAEGASVKEFADIPGIETDYALQLVVDRVMCEDDRFIEREALPVEEEFPE 926
Query: 914 GCQCFALSNPHYGSGGCVISTVKEENSFIKL-SFKVQQEPDLSDLVHLQDDTVYNYLPSY 972
G + F L +YG+ V T E L S +EP+ + + + Y PS+
Sbjct: 927 GTRAFFLGEYNYGA--PVHITGHEAGKLSGLVSVTKGREPEFGRDLTRAAEKLSPYSPSF 984
Query: 973 TVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKK 1032
+A L+++PL L++ T S ++ +R N+GLN+KF K +V+G++RR T
Sbjct: 985 AIARSLNLNPLALAKITSSFTVVLD----GQRINLGLNLKFEAKKLKVLGYSRRGPTG-- 1038
Query: 1033 WFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWLKEQP 1091
W ++E+ + L++ YM +FPE ++ D + D +P + ++ +I +WLK
Sbjct: 1039 WEFSEKAIDLLQQYMIKFPEFIAGIQRKPQGDGFQATDFYPAETAAAKIKEIQAWLKSIE 1098
Query: 1092 HAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITL 1129
+ P A +D+ +V IE A D ++Q+ L
Sbjct: 1099 AKNFDRVPLEAEQLDSNLVKSIEQAADDSSVHDQQLKL 1136
>gi|396497754|ref|XP_003845052.1| similar to 5'-3' exoribonuclease [Leptosphaeria maculans JN3]
gi|312221633|emb|CBY01573.1| similar to 5'-3' exoribonuclease [Leptosphaeria maculans JN3]
Length = 1425
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/445 (48%), Positives = 279/445 (62%), Gaps = 76/445 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDP-HFRITEKQ 59
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H NDND R +E +
Sbjct: 1 MGVPKFFRWMSERYPGISQLIAENRIPEFDCLYLDMNGIIHNCTH-NDNDSVTTRKSEDK 59
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+F IF+YIE LF I+PK+L FMAIDGVAPRAKMNQQR RRFR+A +AE +KA +G
Sbjct: 60 MFISIFNYIEHLFGKIKPKQLIFMAIDGVAPRAKMNQQRARRFRTALDAEKAREKAIREG 119
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 179
+PTE+ FD C FM AK+ QQ
Sbjct: 120 VEMPTEEAFD----SNCITPGTAFM--------AKLTQQ--------------------- 146
Query: 180 GERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILS 239
L+YF+ KI+ D W+ V V+LS
Sbjct: 147 ----------------------------LKYFINKKISED---------LDWQGVEVVLS 169
Query: 240 GHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK 299
GHE PGEGEHKIM+YIR K++PDY+PN RHCLYGLDADLIMLGL +H+P+FSLLREEV
Sbjct: 170 GHEVPGEGEHKIMEYIRQAKAQPDYDPNRRHCLYGLDADLIMLGLLSHDPHFSLLREEVT 229
Query: 300 FNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVL 359
F +S ++ E F+L+HL ++R+YLELEF +L+EPG LSFPF +E +IDD++L
Sbjct: 230 FGRQSQTKSKEL---EHQNFYLMHLCIVREYLELEFQELEEPGALSFPFDMERVIDDFIL 286
Query: 360 MGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
M F +GNDF+PNLP LHI GAL L++ VY+ VLP GYINE G +N++R L +L+
Sbjct: 287 MAFFVGNDFLPNLPHLHINEGALALMFNVYKTVLPKAKGYINEEGVINMERLALLLDELS 346
Query: 420 SFDFEQFREKYADIQYLEGK-MGKK 443
++ F + AD + +GK +GK+
Sbjct: 347 QIEYRHFESENADAAWFKGKRLGKE 371
Score = 352 bits (904), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 264/758 (34%), Positives = 393/758 (51%), Gaps = 72/758 (9%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F K DYY K D+ + E LR E Y++ +QW L+YYY G SW WYY +HY+P
Sbjct: 508 KFDAWKNDYYKSKFDWDRSNEEELRKLTENYVQGLQWVLYYYYRGVASWPWYYGYHYSPM 567
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K ++ +++G+PF PFQQL+ VLP SK ++PE Y LMT E+SPI+++YP +
Sbjct: 568 ISDVKRGLKADINFKLGQPFKPFQQLMGVLPDRSKSIVPEAYHPLMTSEDSPIIDFYPRD 627
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY-SNVN 681
F D+NGKKQDWEAVV IPFI E +L+ AM EH LT +E+SRN G L +TY +++
Sbjct: 628 FTLDMNGKKQDWEAVVKIPFIQEDRLLSAMATKEHNLTADEKSRNGFGVSLKFTYVKDLD 687
Query: 682 -LGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQDVNLKL-YVTHFPT 735
+ + P FP + VE +I+ P + GL V L + FP+
Sbjct: 688 FIYPSSLPGVFPDLPHCKCVE------NIFDLPTMDGLEYFIGLMDGVKLGANALAGFPS 741
Query: 736 LKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLI 794
LK + F K+E A V VFQQ SRNES++I + D + Q A + LGK + + YP L
Sbjct: 742 LKVLPFHGKLEFAGVNVFQQDSRNESMVITLLDTAPRQPVSQ-AKEKLGKAVHVGYPFLH 800
Query: 795 EIRVQAVATKDSRISFD---KNSGPVFERAAKDMQDAFQLSKKS---ITDGYYTKLGVDI 848
E +V V+ + FD SGP A A KK+ I + Y +LG++I
Sbjct: 801 EAKVVKVSDE----LFDYVLPESGPSVPVAIPHDPQAISNWKKTANRIENNYSKRLGINI 856
Query: 849 GNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS-------TVTYAYQSAVLNLQQA--- 898
G E LV+ VE K K T I+ V YA Q+ V + A
Sbjct: 857 GEVESLVH---VEMLKGL-----KKTDDGATIKEYGPVPGLQVEYATQTIVDEVVSADPR 908
Query: 899 ---RESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLS 955
RE+L I+E F G + F L + YG VI + + + K + E D
Sbjct: 909 FLEREAL---PIEEEFPEGARAFYLGDYAYGRPLQVIGHTDGKANIMVAKLK-KPERDFG 964
Query: 956 DLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSR 1015
V + + Y+PSY VA +L++ PL LS+ T S F ++S+ N+KF
Sbjct: 965 RDVVRKAEKATPYIPSYVVARQLNMPPLALSKLTSS-FNVNSSGLKLNLGL---NLKFEA 1020
Query: 1016 KNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ 1075
K +V+G++R+ + W Y+++ + L+ YM +FPE + ++ + D + D +P +
Sbjct: 1021 KKLKVLGYSRKSQNG--WEYSQKAMDLLAQYMIKFPEFIAAIINNPTGDGWEDTDFYPPE 1078
Query: 1076 -GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPN 1134
+Q+V +I +WLKE E P A +D+ V LIE A D +T V+P
Sbjct: 1079 VAKQKVKEIGAWLKEVQTKNFEKVPLDAEQLDSDTVKLIEQAADA----NFPLTQDVEPK 1134
Query: 1135 KLY-IPKPTLDKLCPDPDTK-----FKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYD 1188
K+ +P+ L K D + + F + DR+V ++D VP+G GT+IG + T+
Sbjct: 1135 KVAKVPRVALLKPS-DAEQRLGHQTFAIGDRIVYVQDSGRVPIGSSGTVIG--KTRTARV 1191
Query: 1189 AMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
+ D+VFD F G + RCS RG +PA A++N++
Sbjct: 1192 MLLDIVFDATFMSGTSLGDRCSPFRGSTVPATAVVNVT 1229
>gi|444322153|ref|XP_004181732.1| hypothetical protein TBLA_0G02750 [Tetrapisispora blattae CBS 6284]
gi|387514777|emb|CCH62213.1| hypothetical protein TBLA_0G02750 [Tetrapisispora blattae CBS 6284]
Length = 1546
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/440 (45%), Positives = 271/440 (61%), Gaps = 74/440 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P + +++ QIPEFDNLYLDMN I+H C+H ND+ IT++
Sbjct: 1 MGIPKFFRYISERWPMILQLIEGNQIPEFDNLYLDMNSILHTCTHSNDDSSD--ITKRLS 58
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+++F I F ID +
Sbjct: 59 EEEVFAKI-------------FTYIDHL-------------------------------- 73
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
F+T+K PK+ F+MAIDGVAPRAKMNQQR RRFR+A +AE QKA E+G
Sbjct: 74 ---------FMTIK---PKQTFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALQKAIEEG 121
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
+P + FDSN ITPGT FM +L + L+YF+ KI+ D W++V ++ SG
Sbjct: 122 TEIPKGEPFDSNSITPGTEFMAKLTKNLKYFIHDKISNDS---------NWRNVEIVFSG 172
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HE PGEGEHKIMDYIR ++S+ YNPN RHC+YGLDADLI+LGL TH P+F+LLREEVKF
Sbjct: 173 HEVPGEGEHKIMDYIRTIRSQEGYNPNTRHCIYGLDADLIILGLSTHAPHFALLREEVKF 232
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
+S Q E FFLLHLSL+R+YLELEF + + L F ++ E ++DD++L+
Sbjct: 233 GRRS----GQTPALENQNFFLLHLSLLREYLELEFENIADE--LQFEYNFERVLDDFILI 286
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F+IGNDF+PNLPDLH+ GA P+L + ++E L LDGYINE G +NL+R + +L L
Sbjct: 287 LFVIGNDFLPNLPDLHLNKGAFPVLLQTFKEALLHLDGYINEFGKINLQRLKIWLEYLTQ 346
Query: 421 FDFEQFREKYADIQYLEGKM 440
F+ F +K D+ + ++
Sbjct: 347 FELMNFEQKDIDVDWFNQQL 366
Score = 285 bits (728), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 239/777 (30%), Positives = 370/777 (47%), Gaps = 88/777 (11%)
Query: 504 FGQHKTDYYHYKLDYAKVTNE---VLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYA 560
F + K +YY KL + T+E L+ + Y+ +QW L YYY GC SWSWYYPHHY+
Sbjct: 538 FKKWKNEYYKDKLQFTTNTDEGKQQLKKLSCDYVEGLQWVLFYYYKGCQSWSWYYPHHYS 597
Query: 561 PYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYP 620
P ISD+ H + +E PF PFQQL+AVLP SK L+P + LM ENS I+++YP
Sbjct: 598 PRISDLILGLHQVIDFEKSVPFTPFQQLMAVLPERSKNLIPVCLRPLMYEENSKIIDFYP 657
Query: 621 EEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNV 680
E D NGK +WEAVVL+ FIDE +LI AM+ L+ EE+ RN G L +T++
Sbjct: 658 HEVKLDKNGKTAEWEAVVLLSFIDEKRLIDAMEPYLSKLSPEEKIRNSFGRNLTFTFNPQ 717
Query: 681 NLGTALAP--DYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNL-KLYVTHFPTLK 737
+P F + NH VEK + + GL D + + FPTL
Sbjct: 718 IDEVYKSPLSGIFKDLEHNHCVEKE--HKTVSMDGKDYVYGLLPDAKFGQDLLAGFPTLA 775
Query: 738 HVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVP---SLKQVADQILGKTIFINYPHLI 794
+ F +K+E + VFQQ SR +S+++ + + SL ++ + LGK I+ +P+L
Sbjct: 776 TIPFDYKLEYNESMVFQQASRQQSMVLSVNNIYKETNLSLSDISKRYLGKVIYTRWPYLR 835
Query: 795 EIRVQAVAT------KDSRI-------------SFDKNSGPVFERAAKDMQDA-FQLSKK 834
E ++ A++ D R+ SF KN + R KD + F +
Sbjct: 836 ESKLLAISDGKTIYESDERVSLVNVNPLDHYLSSFTKNI-KISSRPMKDTEKKQFNSLQT 894
Query: 835 SITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQ-----RTFIRSTVTYAYQ 889
S+ Y + V+IG ++ PV G V Q +T+ ++ + Q
Sbjct: 895 SLARKYLKQQAVNIGELTAIIEVLPV---------TGLVRNQEGAYVKTYSSTSEYFPLQ 945
Query: 890 SAVLNLQQARESLEYK---TIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSF 946
V ++Q E K I+E F G + L + Y GG I + + +S +L
Sbjct: 946 LMVRDIQNKDERYAEKPPQPIEEEFPRGSEVIFLGD--YAYGGKAI--IDDYSSKTRLKL 1001
Query: 947 KVQQ-----EPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEG 1001
V++ EP + D+ Y PSY ++ KL++ PL LS+ S F+I +
Sbjct: 1002 TVEKKLSKFEPHIGKERLKLDNEQIKYYPSYVISKKLNLHPLFLSKIL-SKFLIAGID-- 1058
Query: 1002 AKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHS 1061
K N+G+ IKF ++E+V+G+ RR+ K W ++ V+L+++Y F E F L +
Sbjct: 1059 GKHINVGIPIKFESRHEKVLGYARRN--PKGWEFSNIAVSLLEHYRDTFKEFFAKL-SKN 1115
Query: 1062 SDDIYLRDDVFPH----QGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAV 1117
D+I + +FP+ Q V+ I +LK +V ++ +S +E V
Sbjct: 1116 KDNIPSIESLFPNYSPKQCNDLVSNITEFLKTFTANFVKVSIESDSLTKVS-ISAVEDYV 1174
Query: 1118 DTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDT--------KFKLFDRVVNIRDCYTV 1169
+ K E KP + ++ K D + DP T KF L DRVV I+D V
Sbjct: 1175 ERYSKQEP------KPEQKHLAKVPRDAIL-DPKTSFSLLRTQKFSLGDRVVYIQDSGKV 1227
Query: 1170 PLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
PL +GT++G ++ V+FD G K R +RG + A ++N++
Sbjct: 1228 PLFSKGTVVGYTTLGSTISVQ--VLFDHEIVAGNKFGGRLRTNRGLGLDASFLLNIT 1282
>gi|452981894|gb|EME81653.1| hypothetical protein MYCFIDRAFT_215434 [Pseudocercospora fijiensis
CIRAD86]
Length = 1239
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/458 (47%), Positives = 278/458 (60%), Gaps = 80/458 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDP--HFRITEK 58
MGVPKFFR++SERYP +S+++ E +IPEFDNLYLDMNGIIHNC+H ND+D R++E
Sbjct: 1 MGVPKFFRWLSERYPPISQLIAENRIPEFDNLYLDMNGIIHNCTH-NDSDSVTKARLSED 59
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
++F IF+YIE LF I+P+KLFFMAIDGVAPRAKMNQQR RRFR+A +AE KA +
Sbjct: 60 EMFLKIFNYIEFLFGKIKPQKLFFMAIDGVAPRAKMNQQRSRRFRTALDAEKARDKAIAE 119
Query: 119 GERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
G LP E FD C FM A++ QQ
Sbjct: 120 GRELPKEDPFD----SNCITPGTEFM--------ARLTQQ-------------------- 147
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VI 237
L+YFV K++ D W+ C ++
Sbjct: 148 -----------------------------LKYFVAKKVSEDGDWQG----------CEIV 168
Query: 238 LSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE 297
LSGHE PGEGEHKIM+YIR KS+ DY+PN+RHCLYGLDADLIMLGL +H+P+F LLREE
Sbjct: 169 LSGHEVPGEGEHKIMEYIRQAKSQLDYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREE 228
Query: 298 VKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLS-FPFSIENIIDD 356
V F +G S+ E FFLLHL ++R+YLELEF +LKE G L PF +E IIDD
Sbjct: 229 VTF---GRQGKSKSQDLEHQNFFLLHLCIVREYLELEFQELKEKGALGNLPFDMERIIDD 285
Query: 357 WVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLT 416
++LM F +GNDF+PNLP LHI GAL L++ VY+++LP GYIN+GG +NL+R L
Sbjct: 286 FILMAFFVGNDFLPNLPYLHINEGALALMFAVYKKILPKAGGYINDGGTINLERLALLLE 345
Query: 417 KLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSK 454
+L+ ++ F + D +L+ K K DV K K K
Sbjct: 346 ELSDVEYRHFEAENQDAGWLKDKSIHK-EDVMQKTKKK 382
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 152/531 (28%), Positives = 240/531 (45%), Gaps = 40/531 (7%)
Query: 719 GLCQDVNL-KLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQV 777
GL V L K + FP+L+ + T ++ V VFQQ SRNES+++ + +
Sbjct: 534 GLMDGVKLGKDALYGFPSLQTLPHTGQLGFHGVAVFQQESRNESMVVTLSEGEEKGTIAH 593
Query: 778 ADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDM----QDAFQLSK 833
A Q LGK + + YP L E +V V + P E+ + Q K
Sbjct: 594 ARQRLGKAVHVGYPFLHEGKVTTVTDEMFTYRLADPDQPATEQNIIQVPHPPQGISDWKK 653
Query: 834 KS--ITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQS 890
K+ I Y +LG+ IG E LV P+ + G +Q I+ T YA Q+
Sbjct: 654 KADRIEKHYSKRLGMIIGTIESLVQIDPLVGLEK--TDLGATIKQYAPIQGFETDYATQT 711
Query: 891 ---AVLNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLS-- 945
V++ Q E I E F G + F L + YG + VK K
Sbjct: 712 IVDTVISEDQRFLEKEAVPIQEEFPVGTRAFFLGDMAYGRPLEITGHVKGSGGADKAQTW 771
Query: 946 FKVQQEPDLSDLVHL--QDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAK 1003
+ + P+ +H+ Q + Y+PSY VA +L + PL+LS+ T + ++ S +
Sbjct: 772 VSILKGPEQEFGLHIAAQAEARNPYVPSYAVARQLHLHPLVLSKLTSAFTVMSSGLKLNL 831
Query: 1004 RHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSD 1063
N+KF K ++V+G++R+ + K W Y+ + + L+K YM FPE ++ + +
Sbjct: 832 GL----NLKFEAKKQKVLGYSRKSD--KGWEYSPKAIDLLKQYMINFPEFIARIEANPTG 885
Query: 1064 DIYLRDDVF---PHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTC 1120
D + D F P + ++ +I WLK E P A +D V IE A D
Sbjct: 886 DGW-EDTAFYSDPQVAKAKMKEIGQWLKSVETKAFEKVPLEAEQLDGDTVLAIEQAADAN 944
Query: 1121 EKVE-----KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRG 1175
V K+I ++ + KP +D KF+L RVV + D VP+ RG
Sbjct: 945 NAVANAVYGKKIGGV---PRVALLKP-VDAEQRTQRQKFRLGHRVVYVLDTGRVPVAMRG 1000
Query: 1176 TIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
T++G+ + TS + + D+VFD F G + RCS RG +P+ A++NL+
Sbjct: 1001 TVVGLTR--TSRNTLLDIVFDSTFMSGTTLGGRCSPFRGSTVPSNAVLNLT 1049
>gi|347971217|ref|XP_309641.5| AGAP004090-PA [Anopheles gambiae str. PEST]
gi|333466642|gb|EAA05380.5| AGAP004090-PA [Anopheles gambiae str. PEST]
Length = 1042
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 259/751 (34%), Positives = 363/751 (48%), Gaps = 146/751 (19%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MGVP FFR++S +YP + E V + + + N+ + N S PN N R+
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECVEQKAVDDQGNV------VYENLSDPNPN----RVEFDN 50
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
++ D+ I+ P+ D AP K + + E
Sbjct: 51 LYLDMNG---IIHPCTHPE-------DKPAP---------------KNEDEMMIAIFECI 85
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE-----AEV--L 172
+RL + P+K+ +MAIDGVAPRAKMNQQR RRFR++KE AE+ +
Sbjct: 86 DRL----------MNIVRPRKVLYMAIDGVAPRAKMNQQRSRRFRASKETAEKAAEMARI 135
Query: 173 EQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
++ KG LP EK FDSNCITPGTPFM RL + L+Y+V ++ +
Sbjct: 136 REELAAKGAILPPEKEKGSHFDSNCITPGTPFMDRLSRCLQYYVHDRMNNNP-------- 187
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR + +PDY+PN H L G DADLIMLGL THE
Sbjct: 188 -GWKNLKVILSDANVPGEGEHKIMDYIRKQRVQPDYDPNTHHVLCGADADLIMLGLATHE 246
Query: 289 PYFSLLREEVKFNTKSNKGGSQIVTPE-----------------------ETKFFLLHLS 325
+F+++REE N Q + E ET+F + L+
Sbjct: 247 THFTIIREEFLPNKDRPCDICQQIGHEMKSCTGLQSERELADKPPPMPGKETQFIFVRLN 306
Query: 326 LMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLL 385
++++YL+ E L P L FP+ E ++DDWV M F +GNDF+P+LP L I A+ L
Sbjct: 307 VLKEYLQKE---LDMPN-LPFPYDFERVVDDWVFMCFFVGNDFLPHLPSLEIRENAIDRL 362
Query: 386 YKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFR------------------ 427
+Y++ + GY+ + G + L R E +T L + E FR
Sbjct: 363 VTLYKKCVYKTRGYLTDSGSVLLDRVEMIMTDLGFAEDEIFRQRKVSEDRFKERNKRMRM 422
Query: 428 ----------EKYADIQYLEGKMGKKFSDVFHKEKSKEM------------DPDLAALIK 465
E+Y + Q+ +G+ KE + +AA
Sbjct: 423 QNERQRRPNFEQYNNSQFAPTPLGRGVQPQAVVNARKEAAHFRMLGQGGNDNERVAAGNN 482
Query: 466 ATDDDYDDGTEE------VLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYA 519
+ +D GT+ + EE DE W F K YY K D
Sbjct: 483 SANDPSPRGTKRKAEEPLAVTVTEDEEKETPDEVRLWEDGF-------KDRYYESKFDVM 535
Query: 520 KVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG 579
+ + A Y+R + W L YYY GC SW WY+P+HYAP+ SD K ++N ++ G
Sbjct: 536 PQNIKFRQTVAWEYVRGLCWVLRYYYQGCASWEWYFPYHYAPFASDFKHLENVNTHFDRG 595
Query: 580 EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVL 639
PF P QQL+ V PAAS+ +P + LM SPI+++YP +F DLNGKK W+ V L
Sbjct: 596 TPFKPLQQLMGVFPAASRSHVPPAFAELMVDPRSPIIDFYPIDFRIDLNGKKFAWQGVAL 655
Query: 640 IPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
+PF+DE +L KA D LLT+EER RN +G
Sbjct: 656 LPFVDEKRLFKATDPKVPLLTEEERLRNENG 686
>gi|50293237|ref|XP_449030.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528343|emb|CAG62000.1| unnamed protein product [Candida glabrata]
Length = 1522
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/440 (45%), Positives = 270/440 (61%), Gaps = 74/440 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P + +++ QIPEFDNLYLDMN IH C+H ND++ +T+K
Sbjct: 1 MGIPKFFRYISERWPMILQLIEGTQIPEFDNLYLDMNSFIHTCTHGNDDEG---VTQKMS 57
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++++ I F ID +
Sbjct: 58 DEELYSRI-------------FTYIDHL-------------------------------- 72
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
F+ +K PKK+F+M+IDGVAPRAKMNQQR RRFR+A + E QKA ++G
Sbjct: 73 ---------FLMIK---PKKVFYMSIDGVAPRAKMNQQRSRRFRTAMDTEKALQKAMDEG 120
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
E +P FDSNCITPGT FM +L + L Y++ K+T D W+D+ VILSG
Sbjct: 121 EEIPKGDAFDSNCITPGTEFMAQLTRNLNYYIHDKVTNDA---------NWRDIEVILSG 171
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HE PGEGEHKIMD+IR + ++ DY+ N RHC+YGLDADLIMLGL TH P+F+LLREEV F
Sbjct: 172 HEVPGEGEHKIMDFIRNITAQEDYDVNTRHCIYGLDADLIMLGLSTHAPHFALLREEVTF 231
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
++N + EE F+LLHLSL+R+YLELEF ++ + L F F ENI+DD++L+
Sbjct: 232 GRRNNSRNKNL---EEQNFYLLHLSLLREYLELEFKEIGDD--LQFEFDFENILDDFILV 286
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F+IGNDF+PNLPDLH+ GA P+L + ++E L +DGYINE G +N KR + +L L+
Sbjct: 287 MFVIGNDFLPNLPDLHLNKGAFPVLLQTFKEALLHVDGYINERGQINFKRLKVWLDYLSQ 346
Query: 421 FDFEQFREKYADIQYLEGKM 440
F+ F D+ + ++
Sbjct: 347 FELMNFENDDIDVAWFNQQL 366
Score = 297 bits (761), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 231/761 (30%), Positives = 357/761 (46%), Gaps = 73/761 (9%)
Query: 504 FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYI 563
F K +YY K + E + + A Y+ +QW L+YYY GC SWSWYY HYAP I
Sbjct: 511 FENWKAEYYRSKFGIKRDEPERIVEIANNYVEGLQWVLYYYYQGCPSWSWYYHFHYAPRI 570
Query: 564 SDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEF 623
SD+ +K+E G P PFQQL+AVLP SK LLP Y+ LM SPIL++YP E
Sbjct: 571 SDLAKGLDQIIKFEQGSPLTPFQQLMAVLPERSKNLLPAAYRPLMYDPKSPILDFYPSEV 630
Query: 624 ATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNV--N 681
D NGK DWEAVVL+PF+DE +LI+A + L+ EE+ RN G L + Y+ N
Sbjct: 631 QLDKNGKTADWEAVVLLPFVDENRLIEATNHCLAKLSPEEKQRNSFGKNLTFMYNPQVDN 690
Query: 682 LGTALAPDYFPAINENHAVE-----KPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPT 735
+ F I NH V KP+ + R GL + LK + FPT
Sbjct: 691 VYRTTLKGIFSDIQHNHCVALEYQPKPM-------EGKQFRYGLLPNAKLKTQLLAGFPT 743
Query: 736 LKHVQFTHKIENAKVKVFQQPSRNESIII-VQD--KVQVPSLKQVADQILGKTIFINYPH 792
L + FT+ +E + VFQQPSR +S+++ + D K ++K +AD+ L K ++ +P+
Sbjct: 744 LYSLPFTNSLEYNESYVFQQPSRQQSMVLRITDIYKENNLTMKDIADRYLNKIVYTRWPY 803
Query: 793 LIEIRVQAVATKDSRISF----DKNSGPVFERAAKDMQ-DAFQLSKKSITDGYYTKLGVD 847
L E ++ ++ ++ KN+ + R ++ + F +K S+ Y + V
Sbjct: 804 LRESKLISITDGETIHECIPNPAKNTVKIITRPLENNERKQFNSTKNSMLRSYGKQKAVI 863
Query: 848 IGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARES-LEY-- 904
+ +++V Q + P G +T+ Y Q V N+ E +E
Sbjct: 864 LKKIDIIV--QVLAVTGLVRKPNGAYV--KTYASQPDYYPMQLVVENVSNHDERYIERPP 919
Query: 905 KTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFK---VQQEPDLSDLVHLQ 961
K I++ F + L + YG V E S +K++ K ++ EP +
Sbjct: 920 KPIEKEFPINSKVIFLGDYAYGGEATVDGYSSE--SRLKITVKKRFLKTEPTIGKDRLKM 977
Query: 962 DDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVV 1021
D+++ Y PSY ++ +L + PL LS+ T + D N+G+ IKF ++++V+
Sbjct: 978 DESMIKYYPSYVISKELQLHPLFLSKITSKFLVTDCN---GSHVNVGIPIKFEARHQKVL 1034
Query: 1022 GFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVA 1081
G+ RR+ K W Y+ V LIK Y + FP F L +S DI + D+FP + +
Sbjct: 1035 GYARRN--IKGWDYSNVAVALIKRYREMFPAFFAKL-SKTSGDIPVMQDLFPDLSSRAIM 1091
Query: 1082 QIVS----WLK------------EQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEK 1125
++ W+K KA +R C ++ S+ +H KV +
Sbjct: 1092 SMLDDIKQWIKFSTENFVVVSLESNSLTKASIRAC-EDYIEKYSSSIEQHETKQLAKVPR 1150
Query: 1126 QITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGET 1185
+ L P+ + +L KF L DRVV I+D VPL +GT++G
Sbjct: 1151 EAVL--------SPRVSFSQLRAQ---KFDLGDRVVYIQDSGKVPLFSKGTVVGYTTLGL 1199
Query: 1186 SYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
S V+FD G K R RG + A ++N++
Sbjct: 1200 SLSIQ--VLFDHEIVAGNKFGGRLRTKRGIGLDASFLLNIT 1238
>gi|387015832|gb|AFJ50035.1| 5'-3' exoribonuclease 2-like [Crotalus adamanteus]
Length = 945
Score = 389 bits (998), Expect = e-104, Method: Compositional matrix adjust.
Identities = 255/747 (34%), Positives = 358/747 (47%), Gaps = 131/747 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E++ + + ++ S PN N+ F
Sbjct: 1 MGVPAFFRWLSRKYPSIIVSCTEEKAKEYNGIKIPVD-----TSKPNPNEVEF------- 48
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+ E K K E
Sbjct: 49 ------------------DNLYLDMNGII----------------HPCTHPEDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-EVLEQKAK 177
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE E +E+K +
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMESVEEKQR 134
Query: 178 ------EKGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
EKG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 IRQEIMEKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFN--------------TKSNKGGSQIVTPE-----------ETKFFLLH 323
P F+++REE K N TK +G + E E +F +
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHETKDCQGLPKEKQGEHDQFADCPPGMEQEFIFIR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L ++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LCVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD----------- 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTENGYVNLERVQMIMLAVGEVEDSIFKKRKDDEENFKRRQKEK 421
Query: 433 -------------IQYLEGKMGKK-------FSDVFHKEKSKEMDP--DLAALIKATDDD 470
QY +G+ S+ H M + + A
Sbjct: 422 RKRMKREQHTMLGGQYTPQPLGRGNRSSHQPISNPRHTAYEMRMQDRQNTTPSVSANSSF 481
Query: 471 YDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQA 530
DGT + SD + E N K YY K D + R
Sbjct: 482 TSDGTSSTTGGIK-RKTEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDVNDKKFRRKVV 540
Query: 531 ECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPFQQLL 589
+ Y+ + W L YYY GC SW WYYP HYAP+ SD + + L +E G +PF P +QL+
Sbjct: 541 QSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADLVSDFEKGTKPFKPLEQLM 600
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
V PAAS LP ++ LM+ +S I+++YPE+FA DLNGKK W+ V L+PF+DE +L
Sbjct: 601 GVFPAASGNFLPLTWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLR 660
Query: 650 KAMDAVEHLLTDEERSRNRHGPMLVYT 676
A+ V LT EE RN G +++
Sbjct: 661 AALAQVYPNLTSEEMRRNSLGGDVLFV 687
>gi|330916279|ref|XP_003297360.1| hypothetical protein PTT_07733 [Pyrenophora teres f. teres 0-1]
gi|311330012|gb|EFQ94550.1| hypothetical protein PTT_07733 [Pyrenophora teres f. teres 0-1]
Length = 1394
Score = 388 bits (997), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/451 (47%), Positives = 279/451 (61%), Gaps = 76/451 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + R +E Q+
Sbjct: 1 MGVPKFFRWMSERYPGISQLIAENRIPEFDCLYLDMNGIIHNCTHNDSDSVTARKSEDQM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF+YIE LF I+PK+LFFMAIDGVAPRAKMNQQR RRFR+A + E +KA +G
Sbjct: 61 FISIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARRFRTALDTEKAREKAIREGV 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+PTE+ FD C FM AK+ QQ
Sbjct: 121 EMPTEEAFD----SNCITPGTAFM--------AKLTQQ---------------------- 146
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
L+YF+ K++ D W+ V V+LSG
Sbjct: 147 ---------------------------LKYFINKKVSEDI---------DWQGVEVVLSG 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HE PGEGEHK+M+YIR K++P Y+PN RHCLYGLDADLIMLGL +H+P+FSLLREEV F
Sbjct: 171 HEVPGEGEHKVMEYIRQAKAQPGYDPNRRHCLYGLDADLIMLGLLSHDPHFSLLREEVTF 230
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
+S ++ E F+L+HL ++R+YLELEF +L+EPG LSFPF +E +IDD++LM
Sbjct: 231 GRQSQAKSKEL---EHQNFYLMHLCIVREYLELEFQELEEPGALSFPFDMERVIDDFILM 287
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F +GNDF+PNLP LHI GAL L++ VY+ VLP GYINE G +N++R L +LA
Sbjct: 288 AFFVGNDFLPNLPHLHINEGALALMFNVYKTVLPKGKGYINEEGVINMERLATLLDELAD 347
Query: 421 FDFEQFREKYADIQYLEGK-MGKKFSDVFHK 450
++ F + +D + +GK +GK+ DV K
Sbjct: 348 IEYRHFESENSDAAWFKGKSLGKE--DVMKK 376
Score = 350 bits (897), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 247/755 (32%), Positives = 387/755 (51%), Gaps = 42/755 (5%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
D E + + +F K DYY K ++ + E LR E Y++ +QW L+YYY G S
Sbjct: 496 DAQSEMQKKYDEKFEAWKNDYYKSKFEWDRSNEEELRRLTENYVQGLQWVLYYYYRGVAS 555
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
W WYY +HY+P ISD+K ++ +++G+PF PFQQL+ VLP SK ++P+ Y LMT
Sbjct: 556 WPWYYQYHYSPMISDVKRGLKADINFKLGQPFKPFQQLMGVLPDRSKSIVPKAYWPLMTN 615
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
E+SPI+++YP +F D+NGKKQDWEAVV IPFI E +L+KAM E LT +E++RN G
Sbjct: 616 EDSPIIDFYPRDFTLDMNGKKQDWEAVVKIPFIQEDRLLKAMATKEQDLTPDEKARNSFG 675
Query: 671 PMLVYTYS---NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQD 723
L +TY+ + ++L P FP + +E +I+ P + GL
Sbjct: 676 VSLKFTYAKDLDFIYQSSL-PGVFPDLPHCKCIE------NIFDLPTMDGLEYYIGLMDG 728
Query: 724 VNLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQIL 782
V L + FP+LK + F K+E A V VF Q SRNES++I + A L
Sbjct: 729 VKLGADALAGFPSLKVLPFHGKLEFAGVNVFNQDSRNESMVITLLDTEPRQPVSHAIGKL 788
Query: 783 GKTIFINYPHLIEIRVQAVATK--DSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGY 840
GK++ + YP L E +V V+ + D +S D S P+ ++ + I + Y
Sbjct: 789 GKSVHVGYPFLHEAKVVKVSDELFDYVLSEDGVSAPISIPHGPQEISNWKKTANRIENQY 848
Query: 841 YTKLGVDIGNTEVLVYGQPVES-RKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQAR 899
+LG++IG E LV+ + ++ RK G K + ++ V YA Q+ V + A
Sbjct: 849 SKRLGINIGEIESLVHVEMLKGLRKTDEGATIKEYGEVAGLQ--VEYATQAVVDEVVSAD 906
Query: 900 ESL---EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSD 956
+ E I+E F G + F L + YG V+ + + + K + EP+
Sbjct: 907 QRFLEKEALPIEEEFPEGARAFYLGDYAYGRPLQVMGHADNKATIMVAKLK-KPEPNFGR 965
Query: 957 LVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRK 1016
V + Y+PSY +A +L++ PL LS+ T S + S + N+KF K
Sbjct: 966 EVVSMAERSTPYVPSYVIARQLNMPPLALSKLTSSFNVTSSGLKLNLGL----NLKFEAK 1021
Query: 1017 NEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ- 1075
+V+G++R+ + W Y+++ + L+ YM +FPE + ++ + D + D +P +
Sbjct: 1022 KLKVLGYSRK--SPNGWEYSQKAMDLLAQYMIKFPEFVAAIINNPTGDGWEDTDFYPAEI 1079
Query: 1076 GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDT----CEKVEKQITLFV 1131
+Q+V +I +WLKE E P A +D+ V LIE A D ++VE + V
Sbjct: 1080 AKQKVKEIGAWLKEVQTKSFEKVPLDAEQLDSDTVKLIEQAADANFHLTQEVEPKTVSKV 1139
Query: 1132 KPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMY 1191
L P +L F + DR+V ++D VP+G GT++G + T+ +
Sbjct: 1140 PRVALLKPSDAEQRLG---HQNFSIGDRIVYVQDSGRVPIGSSGTVVG--KTRTARVLLL 1194
Query: 1192 DVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
DVVFD F G + RCS RG +PA A++N++
Sbjct: 1195 DVVFDATFMSGTSLGDRCSPFRGSTVPATAVLNMT 1229
>gi|383854346|ref|XP_003702682.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Megachile rotundata]
Length = 944
Score = 388 bits (996), Expect = e-104, Method: Compositional matrix adjust.
Identities = 264/798 (33%), Positives = 392/798 (49%), Gaps = 165/798 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIH--NCSHPNDNDPHFRITE 57
MGVP FFR++S +YP + E + + I NG+ N + PN N F
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKPI--------TTNGVRVPVNSADPNPNGVEF---- 48
Query: 58 KQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 117
++ D+ I+ P+ D AP+ E E++E E
Sbjct: 49 DNLYLDMNG---IIHPCTHPE-------DKPAPK--------------NEDEMME-AIFE 83
Query: 118 KGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-------E 170
+RL + P+KL +MAIDGVAPRAKMNQQR RRFR++KE +
Sbjct: 84 CIDRL----------FRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETNEKINEIQ 133
Query: 171 VLEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTL 226
+ + KG LP EK FDSNCITPGTPFM RL + L Y++ ++ D
Sbjct: 134 RIRSELTLKGASLPPEKPKEEHFDSNCITPGTPFMARLSKCLHYYIHDRLNNDP------ 187
Query: 227 SLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCT 286
W+++ VILS PGEGEHKIMD+IR +++PD++PN +H L G DADLIMLGL T
Sbjct: 188 ---GWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIMLGLAT 244
Query: 287 HEPYFSLLREEVKFN--------------------TKSNKGGSQIVTPEETKFFLLHLSL 326
HEP F+++REE K N ++ N+ E +F + L++
Sbjct: 245 HEPNFTIIREEFKPNKPKPCDICGQLGHEMQECTGSEPNQKEEDNAFGSECQFIFVRLNV 304
Query: 327 MRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLY 386
+R+YLE E L+ P L F + E +IDDWV M F +GNDF+P+LP L I GA+ L
Sbjct: 305 LREYLERE---LQMPN-LPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLV 360
Query: 387 KVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD-------------- 432
+Y++ + G++ + G +NL R + +++L + E F+++ +
Sbjct: 361 NLYKKTVYKTGGFLTDSGDVNLDRVQLIMSELGDVEDEIFKKRQQNELAFKQREKDKKRR 420
Query: 433 --------------IQYLEGKMGKKFSDV----------------FH-----KEKSKEMD 457
Q+ +G + V +H K +KEM
Sbjct: 421 LLGIGNNKPKWIPTGQFAPTALGGQIKPVENARYEAYQMRVLGRNYHSSTEQKGNTKEM- 479
Query: 458 PDLAALIKATDDDYDDGTEEVLNYA--NYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYK 515
L ++I+ +D + G + ++ N ++ DE W F K YY K
Sbjct: 480 --LESMIRP-EDSSNQGKKRKIDEVEDNSDDDQAHDEVRLWEAGF-------KDRYYESK 529
Query: 516 LDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLK 575
D + + A Y+R + W L YYY GC SW WY+P+HYAP+ SD + L+ +
Sbjct: 530 FDVSPDNLAFRNNVALQYVRGLCWVLRYYYQGCASWKWYFPYHYAPFASDFINIGGLSTE 589
Query: 576 YEMGE-PFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDW 634
+E G PF P +QL+ V PAAS + +P P+ LM+ SPI+++YPE+F DLNGKK W
Sbjct: 590 FEKGTVPFRPLEQLMGVFPAASSKHVPAPWAKLMSDPRSPIIDFYPEDFKIDLNGKKFAW 649
Query: 635 EAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAI 694
+ V L+PF+DE +L KA++ LT+ E+ RN G +Y V LG++ ++ +
Sbjct: 650 QGVALLPFVDEKRLFKALEPYYDCLTEAEKKRNVRGDDRLY----VGLGSS-GYNFIKGL 704
Query: 695 NENHA---VEKPLYRDDI 709
NH VE P+ D +
Sbjct: 705 YTNHVGYDVETPICIDGM 722
>gi|432946152|ref|XP_004083793.1| PREDICTED: 5'-3' exoribonuclease 2-like [Oryzias latipes]
Length = 972
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/629 (36%), Positives = 322/629 (51%), Gaps = 93/629 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-EVLEQKAK------E 178
F++I F P+++ +MAIDGVAPRAKMNQQR RRFR++KE E++++K + +
Sbjct: 82 FEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRASKEGVELVDEKQRMREEIIQ 141
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
+G LP E+ RFDSNCITPGT FM L LRY+V +++ D WK+V
Sbjct: 142 RGGYLPPEEIKERFDSNCITPGTEFMDNLAHCLRYYVAERLSNDP---------GWKNVV 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
V LS PGEGEHKIMD+IR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 193 VFLSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 252
Query: 296 EEVKFN----------TKSNKGGSQIVTPE---------------ETKFFLLHLSLMRDY 330
EE K N T Q V E E +F + L ++R+Y
Sbjct: 253 EEFKPNKPRPCSLCGQTGHEMKDCQGVAREKQGQHDEFADTMPVSEQEFIFIRLCVLREY 312
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L FPF E +DDWV M F +GNDF+P+LP L I GA+ L +Y+
Sbjct: 313 LERELTMAS----LPFPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYK 368
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD------------------ 432
+V+ GY+ + GY+NL+R E + + + F+++ D
Sbjct: 369 DVVHKTGGYLTQNGYVNLERVEMIMQAVGVAEDNIFKKRKEDEENFRRRNKEKRKRMKVE 428
Query: 433 ---------IQYLEGKMGKK-----FSDVFHKEKSKEMDP----------DLAALIKATD 468
Q+ +G++ + H+ M+P L A+++
Sbjct: 429 QQGPAYLTTGQFAPQALGRRDVPEPIQNARHQAYDMRMNPREQNNKNAAQSLKAMLRNEG 488
Query: 469 DDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRD 528
E A + SD D E N K YY K D ++ +
Sbjct: 489 SSSSGANESQDRRAPKRKAEDSDSDPEPEDNVRLWEDGWKQRYYKNKFDVDVTDSDFRKK 548
Query: 529 QAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGE-PFLPFQQ 587
+ Y+ + W L YYY GC SW WY+P HYAP+ SD KD + ++E PF P +Q
Sbjct: 549 VVQSYVEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFKDIKEMFTEFEKDTMPFKPLEQ 608
Query: 588 LLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVK 647
L++V PAAS LP ++NLM S I+++YP++FA DLNGKK W+ V L+PF+DE +
Sbjct: 609 LMSVFPAASGNFLPPTWRNLMVSPESSIIDFYPDDFAIDLNGKKYAWQGVALLPFVDERR 668
Query: 648 LIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
L A+ V LT EE RN G +++
Sbjct: 669 LRAALAEVYPDLTPEEARRNSLGSDVLFV 697
Score = 125 bits (315), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 101/158 (63%), Gaps = 31/158 (19%)
Query: 1 MGVPKFFRYISERYP-----CLSEVVRE---YQIP-----------EFDNLYLDMNGIIH 41
MGVP FFR++S +YP C+ E +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEEKGKECNGVRIPVDTTKPNPNEVEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP D P + E ++ IF YI+ LF +++P+++ +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEDK-PAPK-NEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEA-EVLEQKAK------EKGERLPTE---KRFD 129
FR++KE E++++K + ++G LP E +RFD
Sbjct: 119 FRASKEGVELVDEKQRMREEIIQRGGYLPPEEIKERFD 156
>gi|189239340|ref|XP_973739.2| PREDICTED: similar to CG10354 CG10354-PA [Tribolium castaneum]
Length = 867
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 251/712 (35%), Positives = 368/712 (51%), Gaps = 122/712 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGII--HNCSHPNDNDPHFRITEK 58
MGVP FFR++S +YP + E + +D+NG+ N + PN N F
Sbjct: 1 MGVPAFFRWLSRKYPSVIVHCIEQKA-------VDVNGVRVPTNSAEPNPNGVEF----D 49
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
++ D+ I+ P+ D APR E E++ +
Sbjct: 50 NLYLDM---NGIIHPCTHPE-------DRPAPR--------------NEDEMMVAIFE-- 83
Query: 119 GERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---------- 168
++ F+ + P+KL +MAIDGVAPRAKMNQQR RRFR+AKE
Sbjct: 84 ----CIDRIFNIVR-----PRKLLYMAIDGVAPRAKMNQQRSRRFRAAKETVEKINEIKR 134
Query: 169 --AEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTL 226
AE+L + AK E+ P E+ FDSNCITPGTPFM RL L Y++ ++ D
Sbjct: 135 IRAELLLRGAKLPDEK-PKEEHFDSNCITPGTPFMARLSNCLHYYIHERLNNDP------ 187
Query: 227 SLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCT 286
W+ + VILS PGEGEHKIMD+IR +++PD++PN +HCL G DADLIMLGL T
Sbjct: 188 ---GWQGIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHCLCGADADLIMLGLAT 244
Query: 287 HEPYFSLLREEVKFN--------------TKSNKGGSQIVTPE------ETKFFLLHLSL 326
HEP F+++REE K N K GG+ + ET + + L++
Sbjct: 245 HEPNFTIIREEFKPNKPRPCDICGQLGHEMKDCIGGAASAESDTQKVFAETDYIFVRLNV 304
Query: 327 MRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLY 386
+++YLE E L+ P L F + E ++DDWV M F +GNDF+P+LP L I GA+ L
Sbjct: 305 LKEYLERE---LQMPN-LPFKYEFERVLDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLI 360
Query: 387 KVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK-YADIQYLEGKMGKKFS 445
++Y++ + G++ G +NL+R + +++L + E F+ + ++Q+
Sbjct: 361 RLYKDCVYKTGGWLTNSGDVNLERVQLIMSELGKAEDEIFKTRQQKELQFKA-------- 412
Query: 446 DVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFG 505
+EKS D + + ++D E + A+ DE W F
Sbjct: 413 ----REKSMLTPVDSQSSNRGQKRHHEDDDESDDDQAH-------DEVRLWEDGF----- 456
Query: 506 QHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISD 565
K YY K D + + A Y+R + W L YYY GC SW WYYP+HYAP+ SD
Sbjct: 457 --KDRYYESKFDVNSDNLDFRNNVALHYVRGLCWVLRYYYQGCASWKWYYPYHYAPFASD 514
Query: 566 IKDFSHLNLKYEM-GEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFA 624
+ L+ ++E +PF P +QL+ V PAAS + +P+P+ LM+ SPI+++YPE+F
Sbjct: 515 FVHIAGLSTEFEEDSDPFRPLEQLMGVFPAASSKHVPQPWAKLMSDPESPIIDFYPEDFK 574
Query: 625 TDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
DLNGKK W+ V L+PF++E +L KA+ L+ EE RN G +Y
Sbjct: 575 IDLNGKKFAWQGVALLPFVNEDRLFKALAPYYKELSPEEIRRNVRGDDRLYV 626
>gi|363756508|ref|XP_003648470.1| hypothetical protein Ecym_8383 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891670|gb|AET41653.1| Hypothetical protein Ecym_8383 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1479
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/440 (44%), Positives = 269/440 (61%), Gaps = 77/440 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P +S+++ QI EFD LYLDMN I+H C+H ND D R++E+++
Sbjct: 1 MGIPKFFRYISERWPNISQLLDGSQISEFDTLYLDMNSILHTCTHGNDADVTKRLSEEEV 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ I F ID + FR+ K
Sbjct: 61 YLKI-----------------FTYIDHL-------------FRTIK-------------- 76
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
PK++F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA E G
Sbjct: 77 -----------------PKEVFYMAIDGVAPRAKMNQQRSRRFRTAMDAEKALKKAIENG 119
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
E +P+ + FDSNCITPGT FM +L + L+YF+ KI++D LW+ VILSG
Sbjct: 120 EEIPSGEPFDSNCITPGTEFMAKLTKNLKYFIHEKISSDSLWRQA---------NVILSG 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HE PGEGEHKIM++IR ++S+ DYNPN RHC+YGLDADLI+LGL H+ +F+LLREEV F
Sbjct: 171 HEVPGEGEHKIMEHIRILRSQKDYNPNTRHCIYGLDADLIILGLSVHDSHFALLREEVLF 230
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
N E+ FFLLH+S++R+YLELEF +L+ L F + E ++DD++L+
Sbjct: 231 GKNHNSK-----PLEQQNFFLLHISILREYLELEFAELENE--LMFEYDFERLLDDFILV 283
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F+IGNDF+PNLPDLH+ GA P+L + ++E L +DGY+NE G +N RF +L L+
Sbjct: 284 LFVIGNDFLPNLPDLHLNKGAFPVLLQTFKEALRHMDGYMNECGTINFSRFSIWLEYLSK 343
Query: 421 FDFEQFREKYADIQYLEGKM 440
F+ F DI++ ++
Sbjct: 344 FEKANFERSDIDIEWFNQQL 363
Score = 283 bits (725), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 220/755 (29%), Positives = 366/755 (48%), Gaps = 62/755 (8%)
Query: 504 FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYI 563
F Q K YY KL ++ +E L++Q E Y+ +QW L+YYY GC SWSWYY +HYAP I
Sbjct: 507 FNQWKDAYYKEKLGFSYYDDEKLKEQTENYVEGLQWVLYYYYQGCPSWSWYYKYHYAPRI 566
Query: 564 SDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEF 623
SDI + + +E PF PFQQL++VLP SK L+P Y+ LM E SPIL++YP +
Sbjct: 567 SDIIKGINKKISFEKNRPFTPFQQLMSVLPKRSKNLIPPVYRPLMYDEKSPILDFYPNDV 626
Query: 624 ATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNV--N 681
D NGK DWEAVV I F+D +LIK M + L EE+ RNR G +++ ++ N
Sbjct: 627 ELDKNGKTADWEAVVKISFVDAERLIKVMAPYDEKLNQEEKDRNRFGTDILFCFNPQIDN 686
Query: 682 LGTALAPDYFPAINENHAVE-----KPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPT 735
+ + F I NH +E +PL DI R GL + L + FP+
Sbjct: 687 VYESPLKGLFTNIAHNHCIERKYIMRPLETSDI-------RFGLPEGAKLGTSALAGFPS 739
Query: 736 LKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVP--SLKQVADQILGKTIFINYPH 792
LK + F +K+ + +FQQ S+ +++++ V+D Q S+ +A + + K I+ N+P+
Sbjct: 740 LKSIPFENKLVYNECTIFQQRSKYQTMLLYVKDIYQASNMSISDIAQRYMNKIIYTNWPY 799
Query: 793 LIEIRVQAVATKD-----SRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVD 847
L E ++ + ++D + S + + + D S+ Y K G+
Sbjct: 800 LRESKLVGIYSRDVIYESTEAQDGVRSNFITKSSTPDDLKWILPMNSSMKQTYSKKSGII 859
Query: 848 IGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYK-- 905
+ + ++ PV + +TF ++ Y Q + +++ E +
Sbjct: 860 LDDIRAIIKVYPVTG----LARELDGSYTKTFSKTEEYYPLQLFIEDVENKDERYQETPP 915
Query: 906 -TIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSF---KVQQEPDLSDLVHLQ 961
I+E + + L + Y GG I + ++L+ + EP++ +
Sbjct: 916 LPIEEEYPLNSRVIFLGD--YVYGGEAIVDGYSSPTRLRLTINKRSTRMEPNIGKIRASM 973
Query: 962 DDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVV 1021
D Y+PSY VA KL++ PL LS+ T S F+ID+ + HN+GL +K N + +
Sbjct: 974 DKKAIRYIPSYIVARKLNLPPLFLSKIT-SKFLIDAEKS---LHNVGLTVKIQSANVKAL 1029
Query: 1022 GFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVA 1081
G+ ++ T W Y+ + L+++Y FPE F L + I + + VFP++ Q
Sbjct: 1030 GYANKNGTI--WEYSTLTIQLLEHYRNTFPEFFNSLSKLQGNMISI-NSVFPNKSPQEAT 1086
Query: 1082 QIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIE---HAVDTCEKVEKQITLFVKPNKLYI 1138
+I+ E A +V + SL + HAV+T ++++ + L + K +
Sbjct: 1087 KIL----EAVAAYVGDLRSQFIMVSLESDSLTKASIHAVET--EIQRFVQLEDRTEKRQL 1140
Query: 1139 PK-PTLDKLCPDPDT------KFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMY 1191
K P L P+ + +F L DRV+ ++D VPL +GT++G T
Sbjct: 1141 AKVPREAVLDPNRSSAQLRAQRFDLGDRVMYVQDSGNVPLFAKGTVVGYTTIGTRLSI-- 1198
Query: 1192 DVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
V+FD+ F G + R + RG + + ++N++
Sbjct: 1199 QVLFDQEFVAGNTLGGRLTTKRGIGLDSSFLLNIT 1233
>gi|255565761|ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223536958|gb|EEF38596.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 993
Score = 385 bits (990), Expect = e-103, Method: Compositional matrix adjust.
Identities = 249/738 (33%), Positives = 372/738 (50%), Gaps = 139/738 (18%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP F++++ +YP + + EFDNLYLDMNGIIH C HP+D+ P T ++
Sbjct: 1 MGVPAFYKWLVNKYPNVITSPNPNGL-EFDNLYLDMNGIIHPCFHPDDH-PSPPTTFDEV 58
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F +I+ YI+ +F +++P+ L ++AIDGVAPRAKMNQQR RRFR+AK+ E+
Sbjct: 59 FNNIYKYIDHIFSIVRPRNLLYLAIDGVAPRAKMNQQRSRRFRNAKDTEI---------- 108
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
A+ ++R R+ + +VL ++ E
Sbjct: 109 --------------------------------AEAEEERLRKEYEIQGKQVLPKQYSEVS 136
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
DSN ITPGT FM L +L+ ++ I +D WK + VILS
Sbjct: 137 ---------DSNIITPGTEFMFTLSIKLQEYMISNINSDP---------AWKAIKVILSD 178
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV-- 298
PGEGEHKIM +IR + PDYNPN RHCLYGLDADLIML L +HE +FS+LRE V
Sbjct: 179 ASVPGEGEHKIMSFIRQQRMLPDYNPNTRHCLYGLDADLIMLALASHEVHFSILREVVLL 238
Query: 299 ---------------------KFNTKSNKGGSQI----------VTPEETKFFLLHLSLM 327
+F + NK + V+ E + LH+ ++
Sbjct: 239 QQPQSICLSAHTSLQGRIEFGEFGSSENKTKRRFSNDDNTLAKDVSFIEKPYQFLHVWIL 298
Query: 328 RDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYK 387
RDYL+LE P +F F E IIDD+V M F GNDFIPNLP L I A+ LL
Sbjct: 299 RDYLKLEMDIYDPPE--NFTFDSERIIDDFVFMCFFAGNDFIPNLPTLQIHERAVDLLMT 356
Query: 388 VYQEVLPTLDGYINE--------GGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGK 439
VY++ L GY+ + YL+LKR EKF+ + +++ F+++ L +
Sbjct: 357 VYKKNFKKLGGYLVDVHQVNSLKNDYLDLKRVEKFILLIGAYEEMIFKKR----SELRER 412
Query: 440 MGKKFSDVFHKEKSKEMDP----DLAALIKATDDDYDDGTEEVLNYANYE-EYYYS---- 490
M +K +KE+D D+ + ++ D +E++++ + ++S
Sbjct: 413 MLRKLCQHSDAANAKELDGNVEQDMLKISFSSLDAKAQISEDLVSVSAVSISLWFSVLQN 472
Query: 491 ----DEDEEWRTNFFSEFGQH---------------KTDYYHYKLDYAKVTN-EVLR-DQ 529
E+ + R S+ Q+ K YY K ++ E++R +
Sbjct: 473 TKRFKEELKARLRQKSDLFQNGGFRADTVKLGTTGWKKRYYEQKFSAENPSDIELIRKEM 532
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
+ Y + W L YY++ SW+W+YP+H+AP+ SD+K + + K+ G PF PF QL+
Sbjct: 533 VQKYTEGLLWVLGYYFSAVPSWTWFYPYHHAPFASDMKGMAQVKFKFPKGSPFKPFDQLM 592
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
VLP S LP+ Y+ LM E S I+++YP EF D++GK+ W+ + +PFIDE +L+
Sbjct: 593 GVLPPRSAHALPKSYRQLMIDERSSIIDFYPAEFQIDIDGKRFMWQGICKLPFIDEERLL 652
Query: 650 KAMDAVEHLLTDEERSRN 667
+E LT +E +N
Sbjct: 653 AETKKMEKELTRKEADKN 670
>gi|270010451|gb|EFA06899.1| hypothetical protein TcasGA2_TC009846 [Tribolium castaneum]
Length = 975
Score = 385 bits (988), Expect = e-103, Method: Compositional matrix adjust.
Identities = 251/742 (33%), Positives = 373/742 (50%), Gaps = 133/742 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGII--HNCSHPNDNDPHFRITEK 58
MGVP FFR++S +YP + E + +D+NG+ N + PN N F
Sbjct: 1 MGVPAFFRWLSRKYPSVIVHCIEQKA-------VDVNGVRVPTNSAEPNPNGVEF----D 49
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
++ D+ I+ P+ D APR E E++ +
Sbjct: 50 NLYLDM---NGIIHPCTHPE-------DRPAPR--------------NEDEMMVAIFE-- 83
Query: 119 GERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---------- 168
++ F+ + P+KL +MAIDGVAPRAKMNQQR RRFR+AKE
Sbjct: 84 ----CIDRIFNIVR-----PRKLLYMAIDGVAPRAKMNQQRSRRFRAAKETVEKINEIKR 134
Query: 169 --AEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTL 226
AE+L + AK E+ P E+ FDSNCITPGTPFM RL L Y++ ++ D
Sbjct: 135 IRAELLLRGAKLPDEK-PKEEHFDSNCITPGTPFMARLSNCLHYYIHERLNNDP------ 187
Query: 227 SLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCT 286
W+ + VILS PGEGEHKIMD+IR +++PD++PN +HCL G DADLIMLGL T
Sbjct: 188 ---GWQGIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHCLCGADADLIMLGLAT 244
Query: 287 HEPYFSLLREEVKFN--------------TKSNKGGSQIVTPE------ETKFFLLHLSL 326
HEP F+++REE K N K GG+ + ET + + L++
Sbjct: 245 HEPNFTIIREEFKPNKPRPCDICGQLGHEMKDCIGGAASAESDTQKVFAETDYIFVRLNV 304
Query: 327 MRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLY 386
+++YLE E L+ P L F + E ++DDWV M F +GNDF+P+LP L I GA+ L
Sbjct: 305 LKEYLERE---LQMPN-LPFKYEFERVLDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLI 360
Query: 387 KVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK-YADIQYLEGKMGKKFS 445
++Y++ + G++ G +NL+R + +++L + E F+ + ++Q+ + K+
Sbjct: 361 RLYKDCVYKTGGWLTNSGDVNLERVQLIMSELGKAEDEIFKTRQQKELQFKAREKAKRRR 420
Query: 446 DVFHKEKSKEMDPDLAA---LIKATDDDYD----------DGTEEVLNYANYEEYYYS-- 490
+ + D L ++ A + ++ G E +L + +
Sbjct: 421 SEGYNQYKPNWDLALGQAKPVVNARHEAFEIRKAGMHTQKAGLESMLTPVDSQSSNRGQK 480
Query: 491 ---------------DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIR 535
DE W F K YY K D + + A Y+R
Sbjct: 481 RHHEDDDESDDDQAHDEVRLWEDGF-------KDRYYESKFDVNSDNLDFRNNVALHYVR 533
Query: 536 AIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEM-GEPFLPFQQLLAVLPA 594
+ W L YYY GC SW WYYP+HYAP+ SD + L+ ++E +PF P +QL+ V PA
Sbjct: 534 GLCWVLRYYYQGCASWKWYYPYHYAPFASDFVHIAGLSTEFEEDSDPFRPLEQLMGVFPA 593
Query: 595 ASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDA 654
AS + +P+P+ LM+ SPI+++YPE+F DLNGKK W+ V L+PF++E +L KA+
Sbjct: 594 ASSKHVPQPWAKLMSDPESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVNEDRLFKALAP 653
Query: 655 VEHLLTDEERSRNRHGPMLVYT 676
L+ EE RN G +Y
Sbjct: 654 YYKELSPEEIRRNVRGDDRLYV 675
>gi|402585499|gb|EJW79439.1| single-stranded RNA 5'-3' exonuclease [Wuchereria bancrofti]
Length = 446
Score = 385 bits (988), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/314 (60%), Positives = 226/314 (71%), Gaps = 13/314 (4%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT 185
F++I F PKK+FFMAIDGVAPRAKMNQQR RRF SAK A KA++KG ++P
Sbjct: 65 FNYIDFLFGIIKPKKVFFMAIDGVAPRAKMNQQRARRFMSAKNAREALSKARKKGIKIPD 124
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPG 245
EK FDSNCITPGT FM RLH+QL+YFV++KITTD W+ + + LSGH PG
Sbjct: 125 EKPFDSNCITPGTEFMARLHEQLQYFVQMKITTDS---------CWQGLRIYLSGHNCPG 175
Query: 246 EGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN 305
EGEHKIMD+IR +S+ DY+ N RHCLYGLDADLIMLG+C+HEP+F+LLREEVKF + N
Sbjct: 176 EGEHKIMDFIRSERSRSDYDANTRHCLYGLDADLIMLGICSHEPHFALLREEVKFGRQKN 235
Query: 306 KGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIG 365
+ G + +E F LLHLSL+R+YL EF LKE L F + +E++IDDWVLMGFLIG
Sbjct: 236 RNGKHRTSVDEITFHLLHLSLLREYLSWEFYPLKEK--LPFDYDLESVIDDWVLMGFLIG 293
Query: 366 NDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQ 425
NDFIP+LP +HI ALPLLY Y EVLP LDGYINE G LNLKRFE FL A D +
Sbjct: 294 NDFIPHLPHVHIHEDALPLLYATYNEVLPQLDGYINEAGILNLKRFEIFLKNFAKNDRKN 353
Query: 426 FREKYADIQYLEGK 439
F E+ D YL K
Sbjct: 354 FIEQMDDEAYLSSK 367
Score = 204 bits (518), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 94/129 (72%), Positives = 111/129 (86%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV++ QIPEFDNLYLDMNGIIH CSHP+D D FRI+E+QI
Sbjct: 1 MGVPKFYRWISERYPCLSEVVQDEQIPEFDNLYLDMNGIIHGCSHPDDEDISFRISEEQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F+DIF+YI+ LF +I+PKK+FFMAIDGVAPRAKMNQQR RRF SAK A KA++KG
Sbjct: 61 FRDIFNYIDFLFGIIKPKKVFFMAIDGVAPRAKMNQQRARRFMSAKNAREALSKARKKGI 120
Query: 121 RLPTEKRFD 129
++P EK FD
Sbjct: 121 KIPDEKPFD 129
>gi|449018780|dbj|BAM82182.1| exonuclease [Cyanidioschyzon merolae strain 10D]
Length = 829
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/586 (38%), Positives = 309/586 (52%), Gaps = 124/586 (21%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG--ERLPTEKRFDSNCIT 195
P+K F+A+DGVAPRAKMNQQR RRFRSAKEAE + +A +G E E+RFDSNCIT
Sbjct: 74 PRKFLFLAVDGVAPRAKMNQQRSRRFRSAKEAERVLAEAIARGDLEDGFIEERFDSNCIT 133
Query: 196 PGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYI 255
PGT FM RL Q R ++ K+ D+ W+ V+ SG E PGEGEHKIM+ I
Sbjct: 134 PGTAFMDRLSQAFREWIDYKMRNDRAWQTGCK--------VVFSGPEVPGEGEHKIMEMI 185
Query: 256 RYMKSKPDYNPNM--RHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTK-SNKGGSQIV 312
R +K + + +M RHC+YGLDADLIMLGL THEPYF+LLRE++ + + + G+
Sbjct: 186 REIKRQHRHRGDMPIRHCMYGLDADLIMLGLVTHEPYFALLREKLVYRGRIGERLGAAAR 245
Query: 313 TPEET---------------------------------------KFFLLHLSLMRDYLEL 333
+P T +F LL ++L+RD L
Sbjct: 246 SPPITSLSNPAAASESGDNSPLARALAARRMGLVDAPANLDDFEEFHLLEINLLRDELYK 305
Query: 334 EFGKL---KEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
EF +L + F +E I+DD++ MG L+GNDF+P+LP L I +GAL LL+ Y+
Sbjct: 306 EFAELASRQRSDAPPFHVDLERIVDDFMFMGVLVGNDFLPHLPHLDISDGALELLFGAYK 365
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHK 450
E+LP + GY+ + ++ R E F +LA + F + D
Sbjct: 366 ELLPIMGGYLTDKHRIHPDRLEAFAARLAEEERAYFNRRGVD------------------ 407
Query: 451 EKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEY---YYSDEDEEWRTNFFSEFGQH 507
E + Y + E Y YY D+
Sbjct: 408 -------------------------ENIQEYCDPERYRVAYYRDK--------------- 427
Query: 508 KTDYYHYKLDYAKVTNEVLRDQA-ECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI 566
+ LD A NE LR Q + Y+ + W L YY++GC SW+WYYP+++AP SD+
Sbjct: 428 ----FRLNLD-APDGNERLRGQVIQSYLEGLHWVLQYYHHGCPSWTWYYPYYFAPLCSDL 482
Query: 567 KDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+D +++ G+PF P QLL VLP S LP PY+ LM SP+ ++YP EF TD
Sbjct: 483 RDLGSYKVRFLKGKPFTPLTQLLGVLPPESSGELPPPYRQLMLDLESPVRDFYPAEFRTD 542
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVE--HLLTDEERSRNRHG 670
LNGK+ DWEAVVL+PFI+E +L++A+ +++ LT EER R+ G
Sbjct: 543 LNGKRFDWEAVVLLPFIEERRLLEAVGSIDPHRELTSEERRRDLFG 588
Score = 143 bits (360), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 95/131 (72%), Gaps = 5/131 (3%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+P+FFR++S RYP +++ + + EFDN YLDMNGIIH C+H ND D F + E ++
Sbjct: 1 MGIPRFFRWLSLRYPVINQSLEGDR--EFDNFYLDMNGIIHTCTHNNDGDIIF-LDEVEM 57
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG- 119
F IF Y + L+R+++P+K F+A+DGVAPRAKMNQQR RRFRSAKEAE + +A +G
Sbjct: 58 FARIFAYTDRLYRIVKPRKFLFLAVDGVAPRAKMNQQRSRRFRSAKEAERVLAEAIARGD 117
Query: 120 -ERLPTEKRFD 129
E E+RFD
Sbjct: 118 LEDGFIEERFD 128
>gi|350410980|ref|XP_003489200.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Bombus impatiens]
Length = 947
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 261/782 (33%), Positives = 383/782 (48%), Gaps = 156/782 (19%)
Query: 1 MGVPKFFRYISERYPC-LSEVVREYQIPEFDNLYLDMNGIIH--NCSHPNDNDPHFRITE 57
MGVP FFR++S +YP + E + + I NG+ N + PN N F
Sbjct: 1 MGVPAFFRWLSRKYPSIIVECIEQKPI--------TTNGVRVPVNSADPNPNGIEF---- 48
Query: 58 KQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 117
++ D+ I+ P+ D AP+ E E++E E
Sbjct: 49 DNLYLDM---NGIIHPCTHPE-------DKPAPK--------------NEEEMME-AIFE 83
Query: 118 KGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 177
+RL + P+KL +MAIDGVAPRAKMNQQR RRFR++KEA + K
Sbjct: 84 CIDRL----------FRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKEASEKVNEIK 133
Query: 178 E-------KGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTL 226
KG LP EK FDSNCITPGTPFM RL Q L Y++ ++ D
Sbjct: 134 RIRSELTLKGASLPPEKPKEDHFDSNCITPGTPFMARLSQCLHYYIHDRLNNDP------ 187
Query: 227 SLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCT 286
W+++ VILS PGEGEHKIMD+IR +++PD++PN +H L G DADLIMLGL T
Sbjct: 188 ---GWRNIKVILSDANVPGEGEHKIMDFIRKQRAQPDHDPNTQHVLCGADADLIMLGLAT 244
Query: 287 HEPYFSLLREEVKFN--------------------TKSNKGGSQIVTPEETKFFLLHLSL 326
HEP F+++REE K N + N+G E ++ + L++
Sbjct: 245 HEPNFTIIREEFKPNKPKPCDICGQLGHEMQECTGAEVNQGDETNTFGSECQYIFVRLNV 304
Query: 327 MRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLY 386
+R+YLE E L+ P L F + E +IDDWV M F +GNDF+P+LP L I GA+ L
Sbjct: 305 LREYLERE---LQMPN-LPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLV 360
Query: 387 KVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFE----------QFREKYADI--- 433
+Y++ + G++ + G +NL R + +++L + E F+++ D
Sbjct: 361 NLYKKAVYKTGGFLTDSGDVNLDRVQLIMSELGDVEDEIFKKRQQNELAFKQREKDKKKL 420
Query: 434 ---------------QYLEGKMGKKFSDV----------------FH---KEKSKEMDPD 459
Q+ ++G+ S V +H K S+EM
Sbjct: 421 SLGIGNNKPKWIPTGQFAPTRIGEHVSPVQNARYEAYQMRVCGQNYHTSGKRSSQEMLES 480
Query: 460 LAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYA 519
+ +T+ E + ++ ++ + DE W F K YY K D +
Sbjct: 481 MMRPENSTNQVMKRKRESAEDDSDDDQVH--DEVRLWEDGF-------KDRYYESKFDVS 531
Query: 520 KVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG 579
+ A Y+R + W L YYY GC SW WY+P+HYAP+ SD + L+ ++E G
Sbjct: 532 PDNLAFRNNVALQYVRGLCWVLRYYYQGCASWKWYFPYHYAPFASDFINIGGLSTEFEKG 591
Query: 580 E-PFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVV 638
PF P +QL+ V PAAS + +P P+ LM SPI+++YPE+F DLNGKK W+ +
Sbjct: 592 TTPFRPLEQLMGVFPAASSKHIPAPWAKLMINPRSPIIDFYPEDFKIDLNGKKFAWQGIA 651
Query: 639 LIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENH 698
L+PF+DE +L KA++ LT+ E+ RN G +Y V LG + ++ + NH
Sbjct: 652 LLPFVDEKRLFKALEPYYDCLTEAEKKRNVQGDNRLY----VGLGNS-GYNFIKGLYTNH 706
Query: 699 AV 700
+
Sbjct: 707 VL 708
>gi|366992011|ref|XP_003675771.1| hypothetical protein NCAS_0C04170 [Naumovozyma castellii CBS 4309]
gi|342301636|emb|CCC69407.1| hypothetical protein NCAS_0C04170 [Naumovozyma castellii CBS 4309]
Length = 1488
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/440 (44%), Positives = 274/440 (62%), Gaps = 75/440 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P + +++ QIPEFDNLYLDMN I+H C+H ND+D R+TE
Sbjct: 1 MGIPKFFRYISERWPMILQLIEGTQIPEFDNLYLDMNSILHTCTHGNDDDVTKRMTE--- 57
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+++F I F ID +
Sbjct: 58 -EEVFAKI-------------FTYIDHL-------------------------------- 71
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
F+T+K PKK F+MAIDGVAPRAKMNQQR RRFR+A +AE QKA + G
Sbjct: 72 ---------FLTIK---PKKTFYMAIDGVAPRAKMNQQRSRRFRTAMDAEHALQKAIDHG 119
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
E +P + FDSN ITPGT FM +L + L+YF+ KI+ D W+++ +I SG
Sbjct: 120 EEIPKGEPFDSNSITPGTEFMAKLTKNLKYFIHDKISNDA---------KWREIDIIFSG 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HE PGEGEHKIMD+IR + ++ D++ N RHC+YGLDADLI+LGL TH P+F+LLREEV F
Sbjct: 171 HEVPGEGEHKIMDFIRRITAEKDFDENTRHCIYGLDADLIILGLSTHAPHFALLREEVVF 230
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
+++ +++ T E F+LLHLSL+R+Y+ELEF ++ + + FPF E ++DD++L+
Sbjct: 231 GRRNS---NKVKTLENQNFYLLHLSLLREYMELEFSEIADE--MQFPFDFERVLDDFILV 285
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F+IGNDF+PNLPDLH+ GA P++ + ++E L LDGYINE G +NL+R + L+
Sbjct: 286 MFVIGNDFLPNLPDLHLNKGAFPVILQTFKEALLHLDGYINEHGKINLERLRVWFQYLSQ 345
Query: 421 FDFEQFREKYADIQYLEGKM 440
F+ F + D+++ ++
Sbjct: 346 FELLNFEKSDIDVEWFNQQL 365
Score = 270 bits (689), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 220/772 (28%), Positives = 356/772 (46%), Gaps = 64/772 (8%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCV 549
+DE E+ + + F K DYY KL + E + Y+ +QW L+YYY GC
Sbjct: 494 ADELEKEKGLYDERFENWKHDYYKDKLGFKTNQEESVVSLTNNYVEGLQWVLYYYYRGCP 553
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMT 609
SW WYY +HYAP ISD++ +K++ G PF PF+QL+AVLP SK L+P + LM
Sbjct: 554 SWGWYYHYHYAPRISDLEKGLDQIIKFDKGRPFTPFEQLMAVLPERSKNLIPPALRPLMY 613
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
E SPI+++YP E D+NGK DWEAVVL+ F+DE +L++AM T EE+ RN
Sbjct: 614 DEKSPIIDFYPSEVKLDMNGKTADWEAVVLLSFVDEKRLVEAMKPYLSKFTPEEKLRNSF 673
Query: 670 GPMLVYTYSNVNLGTALAP--DYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLK 727
G L + ++ +P F + +H VE+ ++ ++ R GL
Sbjct: 674 GTSLKFIFNQQVDTIYKSPLSGIFSDLEHDHCVEREFVEK--HIDESEFRFGLLPHARTG 731
Query: 728 LYV-THFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKV---QVPSLKQVADQILG 783
+ FPTLK + F +++E + VFQQ SR +S+++ D + +L +++ + L
Sbjct: 732 TELQAGFPTLKSLPFKYQLEYNESLVFQQASRQQSMVLHMDDIYHENNLTLDELSKRYLN 791
Query: 784 KTIFINYPHLIEIRVQAVATKDSRISFDKNSGP----VFERAAK--DMQDAFQLS--KKS 835
+ I+ +P+L E ++ ++ ++ +++G F+R + D D Q + K S
Sbjct: 792 QIIYTRWPYLRESKLISITDGETVYERKEHTGADGKVHFKRITRSADNHDRKQFNSLKHS 851
Query: 836 ITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTV-TYAYQSAVLN 894
+ Y + V + ++ PV V R + V T+A Q
Sbjct: 852 MLRNYGKQKAVILDKVRAIIEVLPV------------VGLTRNDDGAYVKTFASQPDYYP 899
Query: 895 LQQARESLEYKT----------IDEIFYPGCQCFALSNPHYGSGGCV--ISTVKEENSFI 942
LQ ES+ K I E F G L + YG V ++ K +
Sbjct: 900 LQLMVESITNKDERYIEKPPLPIKEEFPVGSHSIFLGDYAYGGEAFVDGYNSEKRLKLTV 959
Query: 943 KLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGA 1002
SF + EP + D +Y+PS+ +A KL + PL LSR T + D +
Sbjct: 960 TKSFN-KTEPTIGKERLAIDHRAVHYIPSFIIAKKLGLHPLFLSRITTKFMLADVS---G 1015
Query: 1003 KRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSS 1062
+ N+G+ +KF K+E+V+G+ R+ K W Y+ + LI Y +FPE F L
Sbjct: 1016 RHINVGIPVKFEAKHEKVLGYARKG--IKGWEYSNLTINLITEYKNKFPEFFNKLSK-VG 1072
Query: 1063 DDIYLRDDVFPHQGEQRVA----QIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD 1118
+ I + +D++P +A +I WLK K V + + + ++E V
Sbjct: 1073 NGIPILEDLYPELSSSNLAKFLDEIKKWLKFVTE-KFVVVSIESDSLTKSSIGIVEEFVQ 1131
Query: 1119 TCEK----VEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYR 1174
+ EK+ V + P+ ++ L +F L DRV+ ++D VPL R
Sbjct: 1132 EYTRKSYPTEKKQLANVPRQAILNPRTSVGILR---SQRFDLGDRVIYVQDSGKVPLFSR 1188
Query: 1175 GTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
GT++G + V+FD G R +RG + A ++NL+
Sbjct: 1189 GTVVGYTT--LGLNLSVQVLFDNEIVAGNTFGGRLRTNRGLGLDASFLLNLT 1238
>gi|170593371|ref|XP_001901438.1| 5'-3' exoribonuclease 2 [Brugia malayi]
gi|158591505|gb|EDP30118.1| 5'-3' exoribonuclease 2, putative [Brugia malayi]
Length = 937
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 253/749 (33%), Positives = 367/749 (48%), Gaps = 143/749 (19%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR+++ +YP + E + + + + + +N + D +P+F Q
Sbjct: 1 MGVPAFFRWLTRKYPSVVVDAVEEKPRDLNGIRVPVNTV--------DPNPNF-----QE 47
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F +++ + ++G+ + R K E + E +
Sbjct: 48 FDNLY-----------------LDMNGIIHPCTHPEDRP----CPKTEEEMFMLIFEYID 86
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-EVLEQKAKEK 179
RL F ++ P+KL +MA+DGVAPRAKMNQQR RRFR++KEA E +EQ A+ +
Sbjct: 87 RL-------FAIVR---PRKLLYMAVDGVAPRAKMNQQRSRRFRASKEAIEKVEQIAETR 136
Query: 180 ------GERLPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWV 230
G LP EK+ FDSNCITPGTPFM RL LRY+V ++ +D
Sbjct: 137 LRLESEGYPLPPEKKTEHFDSNCITPGTPFMARLAVALRYYVHQRLNSDP---------G 187
Query: 231 WKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPY 290
W+ + VILS PGEGEHKIMD+IR ++ P ++PN HCL G DADLIMLGL THEP
Sbjct: 188 WRKIAVILSDANVPGEGEHKIMDFIRRQRASPSHDPNTVHCLCGADADLIMLGLATHEPN 247
Query: 291 FSLLREEVKFNTK--------------------SNKGGSQIVTP--EETKFFLLHLSLMR 328
F+++REE N + S+ TP +ET F + L ++R
Sbjct: 248 FNIIREEFVPNQQRPCDLCGQYGHGLNDCKGLASDDNSECQSTPLQKETNFIFIRLPVLR 307
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
+YLE E L P S PF +E IDDWV M F +GNDF+P+LP L I A+ L K+
Sbjct: 308 EYLERE---LHIPNC-SIPFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVKL 363
Query: 389 YQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQ-------------- 434
Y++++ + G++ + G ++++R + L KL + E F+ + Q
Sbjct: 364 YKDMVCEMKGHLTDSGIVHIERAQIILDKLGEVEDEIFKSRQEREQQFKRRNKEKKWREQ 423
Query: 435 -----------------------YLEGKMGKKFS--------DVFHKEKSKEMDPDLAAL 463
YL G + + D ++ M+ +
Sbjct: 424 ALATPSYIPSRGSLLSPQTNGPMYLSGSSTRTMARTARLEALDFTETVHTRAMNNATFHV 483
Query: 464 IKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTN 523
+ DD +E+ N ++ E+ + DE W + K YY K
Sbjct: 484 PAINISEKDDHKQELKNNSSSEDEVF-DEVRLWEDGW-------KDRYYKSKFQVDGKDI 535
Query: 524 EVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEM-GEPF 582
R A Y+ + W LHYYY GC SW WYYP HYAP+ SD S + EPF
Sbjct: 536 VFRRKVALAYVEGLCWVLHYYYQGCASWDWYYPFHYAPFASDFDAVSQFKPDFSAYTEPF 595
Query: 583 LPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPF 642
P QQL++V PAAS+ LPE +Q LM SPI+++YP+ F DLNGKK W+ V L+PF
Sbjct: 596 KPLQQLMSVFPAASRMHLPEAWQELMISPVSPIIDFYPDNFVIDLNGKKCAWQGVALLPF 655
Query: 643 IDEVKLIKAMDAVEHLLTDEERSRNRHGP 671
+DE +L++ ++ +E L E+ RN GP
Sbjct: 656 VDEKRLLEVLNPMEDKLDAFEKERNSRGP 684
>gi|195577157|ref|XP_002078439.1| GD23438 [Drosophila simulans]
gi|194190448|gb|EDX04024.1| GD23438 [Drosophila simulans]
Length = 842
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 244/687 (35%), Positives = 347/687 (50%), Gaps = 131/687 (19%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MNGIIH C+HP D P + E ++ IF I+ LF +++P+KL +MAIDGVAPRAKMN
Sbjct: 1 MNGIIHPCTHPEDK-PAPK-NEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMN 58
Query: 96 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKM 155
QQR RRFR+AKE TEKR
Sbjct: 59 QQRSRRFRAAKET---------------TEKRL--------------------------- 76
Query: 156 NQQRGRRFRSAKEAEVLEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYF 211
E + ++ +G +LP EK FDSNCITPGTPFM RL + L YF
Sbjct: 77 ------------EVARIREELLSRGCKLPPEKEKGDHFDSNCITPGTPFMDRLSKCLHYF 124
Query: 212 VKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHC 271
V ++ + WK + VILS PGEGEHKIMDYIR +++PD++PN +H
Sbjct: 125 VHDRLNNNP---------AWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHV 175
Query: 272 LYGLDADLIMLGLCTHEPYFSLLREEV------------KFNTKSNKG-GSQIVTP---- 314
L G DADLIMLGL THEP F+++REE F + +K G P
Sbjct: 176 LCGADADLIMLGLATHEPNFTIIREEFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSAN 235
Query: 315 --------EETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGN 366
E KF + LS++R+YL+ L+ P L F +S E +DDWV M F +GN
Sbjct: 236 FKPDVPIGAEVKFIFVRLSVLREYLKQ---TLEMPN-LPFEYSFERALDDWVFMCFFVGN 291
Query: 367 DFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF 426
DF+P+LP L I GA+ L ++Y++ + GY+ + G +NL R + +T L + + + F
Sbjct: 292 DFLPHLPSLEIREGAVDRLVELYKKCVYKTKGYLTDSGDVNLDRVQLIMTDLGNAEDQIF 351
Query: 427 REKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDG-TEEVLNYANYE 485
+ + + ++F K +E + D +L ++ G + + NY+
Sbjct: 352 KSRQ--------RREEQFKARDKARKRQERNQDHGSLNQSAFGASAVGPNSQQKSVGNYK 403
Query: 486 EYYYSDEDEEWRTNFFSEFGQH----------------KTDYYHYKLDYAKVTNEVLRDQ 529
E + + + RT+ + K YY K D A +
Sbjct: 404 EEAAALRNRK-RTSDMANLDDEDEEENNDEVRLWEDGFKDRYYESKFDVAPGNQQFRYAV 462
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPFQQL 588
A Y+R + W L YYY GC SW+WY+P+HYAP+ SD + L+ +E G +PF P +QL
Sbjct: 463 ALQYVRGLCWVLKYYYQGCASWNWYFPYHYAPFASDFVNIQGLSTMFEKGTKPFNPLEQL 522
Query: 589 LAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKL 648
+ V PAAS +PEP+ LM+ SPI+++YPE+F DLNG+ + L+PF+DE +L
Sbjct: 523 MGVFPAASSSHVPEPWAKLMSDPESPIIDFYPEDFKIDLNGR------MALLPFVDEKRL 576
Query: 649 IKAMDAVEHLLTDEERSRNRHGPMLVY 675
KA+ LT EE RN+ G +Y
Sbjct: 577 FKALVPYYDQLTGEEVKRNKRGDNYLY 603
>gi|195471641|ref|XP_002088111.1| GE14198 [Drosophila yakuba]
gi|194174212|gb|EDW87823.1| GE14198 [Drosophila yakuba]
Length = 897
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 253/740 (34%), Positives = 361/740 (48%), Gaps = 142/740 (19%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP +I C+ DP T + I
Sbjct: 1 MGVPAFFRWLSRKYP----------------------SVIIECNENKKVDPD---TGRNI 35
Query: 61 FQDIFHYIEILFRMIQPKKL----FFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 116
++D + P + ++ ++G+ E K
Sbjct: 36 YEDA--------TLPNPNGIEFDNLYLDMNGII----------------HPCTHPEDKPA 71
Query: 117 EKGERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA----- 169
K E FD I F P+KL +MAIDGVAPRAKMNQQR RRFR+AKE
Sbjct: 72 PKNEDEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKETTEKRL 131
Query: 170 --EVLEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWK 223
+ ++ +G +LP EK FDSNCITPGTPFM RL + L YFV ++ +
Sbjct: 132 EIARIREELMSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFVHDRLNNNP--- 188
Query: 224 DTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLG 283
WK + VILS PGEGEHKIMDYIR +++PD++PN +H L G DADLIMLG
Sbjct: 189 ------AWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIMLG 242
Query: 284 LCTHEPYFSLLREEV------------KFNTKSNKG-GSQIVTP------------EETK 318
L THEP F+++REE F + +K G P E K
Sbjct: 243 LATHEPNFTIIREEFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSASFKPDVPIGAEVK 302
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
F + LS++R+YL+ L+ P L F +S E +DDWV M F +GNDF+P+LP L I
Sbjct: 303 FIFVRLSVLREYLKQ---TLEMPN-LPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 358
Query: 379 NGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEG 438
GA+ L ++Y++ + GY+ G +NL R + +T L + + + F+ +
Sbjct: 359 EGAVDRLVELYKKCVYKTKGYLTTSGDVNLDRVQLIMTDLGNAEDQIFKSRQ-------- 410
Query: 439 KMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDG-TEEVLNYANYEEYYYSDEDEE-- 495
+ ++F K +E + D +L +++ G + + NY+E + + +
Sbjct: 411 RREEQFKTRDKCRKRQERNQDHGSLNQSSFGASAVGPNSQQKSVGNYKEEAAALRNRKRT 470
Query: 496 -------------------WRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRA 536
W F K YY K D A + A Y+R
Sbjct: 471 GDQANLDDDDEEDNDEVRLWEDGF-------KDRYYESKFDVAPGNQQFRYAVALQYVRG 523
Query: 537 IQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPFQQLLAVLPAA 595
+ W L YYY GC SW+WY+P+HYAP+ SD + L+ +E G +PF P +QL+ V PAA
Sbjct: 524 LCWVLKYYYQGCSSWNWYFPYHYAPFASDFVNIQGLSTAFEKGTKPFNPLEQLMGVFPAA 583
Query: 596 SKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
S +PEP+ LM+ SPI+++YPE+F DLNGKK W+ V L+PF+DE +L KA+
Sbjct: 584 SSSHVPEPWAKLMSDPESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPY 643
Query: 656 EHLLTDEERSRNRHGPMLVY 675
LT EE +RN+ G +Y
Sbjct: 644 YDQLTGEEVTRNKRGDNYLY 663
>gi|194760286|ref|XP_001962372.1| GF15434 [Drosophila ananassae]
gi|190616069|gb|EDV31593.1| GF15434 [Drosophila ananassae]
Length = 911
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 256/733 (34%), Positives = 362/733 (49%), Gaps = 127/733 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP +I C+ DP T + I
Sbjct: 1 MGVPAFFRWLSRKYP----------------------SVIIECNENKQVDPD---TGRNI 35
Query: 61 FQDIFHYIEILFRMIQPKKL----FFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 116
++D + P + ++ ++G+ E K
Sbjct: 36 YEDA--------TLPNPNGVEFDNLYLDMNGII----------------HPCTHPEDKPA 71
Query: 117 EKGERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA----- 169
K E FD I F P+KL +MAIDGVAPRAKMNQQR RRFR+AKE
Sbjct: 72 PKNEDEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKETTEKRL 131
Query: 170 --EVLEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWK 223
L ++ +G +LP EK FDSNCITPGTPFM RL + L Y+V ++ +
Sbjct: 132 EIARLREELMSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYVHDRLNNNP--- 188
Query: 224 DTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLG 283
WK V VILS PGEGEHKIMDYIR +++PD++PN +H L G DADLIMLG
Sbjct: 189 ------AWKGVKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIMLG 242
Query: 284 LCTHEPYFSLLREEVKFNT---------------KSNKGGS--------QIVTPEETKFF 320
L THEP F+++REE N K N G+ + E KF
Sbjct: 243 LATHEPNFTIIREEFLPNKPRPCDICNQFGHEMEKCNGLGATTGANFKPDVPIGAEVKFI 302
Query: 321 LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIING 380
+ LS++R+YL+ L P L F +S E +DDWV M F +GNDF+P+LP L I G
Sbjct: 303 FVRLSVLREYLKQ---TLVMPN-LPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 381 ALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGK- 439
A+ L ++Y++ + GY+ + G +NL R + +T L + + + F+ + Q + +
Sbjct: 359 AVDRLVELYKKCVYKTRGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKNRQRREQQFKARD 418
Query: 440 MGKKFSDVFHKEKSKEMDPDLAALIKATD-----DDYDD-----------GTEEVLNYAN 483
++ + +S + A + A + +Y + G + L
Sbjct: 419 KARRRQERNQDHRSLDQSVFGANAVGAGNQPGNIGNYKEAAAALRLGKRSGAQAGLEDDE 478
Query: 484 YEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHY 543
EE +DE W F K YY K D A + A Y+R + W L Y
Sbjct: 479 EEEEEDNDEVRLWEDGF-------KDRYYESKFDVAPGNLQFRYAVALQYVRGLCWVLKY 531
Query: 544 YYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPE 602
YY GC SW+WY+P+HYAP+ SD + L+ +E G +PF P +QL+ V PAAS +PE
Sbjct: 532 YYQGCASWNWYFPYHYAPFASDFVNIQGLSTIFEKGTKPFNPLEQLMGVFPAASSSHVPE 591
Query: 603 PYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDE 662
P+ +LM+ +SPI+++YPE+F DLNGKK W+ V L+PF+DE +L KA+ LT E
Sbjct: 592 PWADLMSNPDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTSE 651
Query: 663 ERSRNRHGPMLVY 675
E RN+ G +Y
Sbjct: 652 EVKRNKRGDNYLY 664
>gi|198471914|ref|XP_001355769.2| GA10268 [Drosophila pseudoobscura pseudoobscura]
gi|198139522|gb|EAL32828.2| GA10268 [Drosophila pseudoobscura pseudoobscura]
Length = 916
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 247/734 (33%), Positives = 358/734 (48%), Gaps = 134/734 (18%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +Y +I +C+ DP T K I
Sbjct: 1 MGVPAFFRWLSRKYA----------------------SVIIDCNENKQVDPD---TGKNI 35
Query: 61 FQDIFHYIEILFRMIQPKKL----FFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 116
++D + P + ++ ++G+ E K
Sbjct: 36 YEDA--------TLPNPNGVEFDNLYLDMNGII----------------HPCTHPEDKPA 71
Query: 117 EKGERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA----- 169
K E FD I F P+K+ +MAIDGVAPRAKMNQQR RRFR+AKE
Sbjct: 72 PKNEDEMMVAIFDCIDRLFGIVRPRKVLYMAIDGVAPRAKMNQQRSRRFRAAKETTEKRM 131
Query: 170 EV--LEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWK 223
E+ + ++ +G +LP EK FDSNCITPGTPFM RL + L Y+V + +
Sbjct: 132 EIARIREELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYVHDRQNNNP--- 188
Query: 224 DTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLG 283
WK + VILS PGEGEHKIMDYIR +++PD++PN +H L G DADLIMLG
Sbjct: 189 ------AWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIMLG 242
Query: 284 LCTHEPYFSLLREE----------------------VKFNTKSNKGGS---QIVTPEETK 318
L THEP F+++REE V + + G + + E K
Sbjct: 243 LATHEPNFTIIREEFLPNKPRPCDICNQFGHEMDKCVGLSAVGSSGANFKPDVAIGAEVK 302
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
F + LS++R+YL+ L+ P L F + E +DDWV M F +GNDF+P+LP L I
Sbjct: 303 FIFVRLSVLREYLKQ---TLEMPN-LPFEYDFERTLDDWVFMCFFVGNDFLPHLPSLEIR 358
Query: 379 NGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEG 438
GA+ L ++Y++ + GY+ + G +NL R + +T L + + + F+ + Q +
Sbjct: 359 EGAVDRLVELYKKCVYKTKGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREQQFKA 418
Query: 439 KMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYA---------------- 482
+ ++ ++ +D + A + + NY
Sbjct: 419 REKQR-----QRQDHSALDQSVFGPT-AVGGGRNGQPSSIANYKQEAAALRTGQKRPNED 472
Query: 483 NYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLH 542
+E +DE W F K+ YY K D A + A Y+R + W L
Sbjct: 473 TKDEEEDNDEVRLWEDGF-------KSRYYESKFDVAPENHSFRYAVALQYVRGLCWVLK 525
Query: 543 YYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLP 601
YYY GC SW+WY+P+HYAP+ SD + L+ +E G +PF P +QL+ V PAAS +P
Sbjct: 526 YYYQGCASWNWYFPYHYAPFASDFVNIQGLSTAFEKGTKPFNPLEQLMGVFPAASSSHVP 585
Query: 602 EPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTD 661
EP+ LM+ +SPI+++YPE+F DLNGKK W+ V L+PF+DE +L KA+ LT
Sbjct: 586 EPWAELMSSPDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYTQLTG 645
Query: 662 EERSRNRHGPMLVY 675
E RN+ G +Y
Sbjct: 646 AEVKRNKQGHNFLY 659
>gi|71895763|ref|NP_001026204.1| 5'-3' exoribonuclease 2 [Gallus gallus]
gi|75571238|sp|Q5ZIP4.1|XRN2_CHICK RecName: Full=5'-3' exoribonuclease 2
gi|53135140|emb|CAG32399.1| hypothetical protein RCJMB04_24h23 [Gallus gallus]
Length = 949
Score = 382 bits (981), Expect = e-102, Method: Compositional matrix adjust.
Identities = 254/770 (32%), Positives = 359/770 (46%), Gaps = 179/770 (23%)
Query: 1 MGVPKFFRYISERYP-----CLSEVVREYQIPEFDNLYLDMNGIIH--NCSHPNDNDPHF 53
MGVP FFR++S +YP C+ E +E NG+ + S PN N+ F
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKAKE------------CNGVKASVDTSKPNPNEVEF 48
Query: 54 RITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQ 113
++ D+ I+ P E
Sbjct: 49 ----DNLYLDMNG---IIHPCTHP----------------------------------ED 67
Query: 114 KAKEKGERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-E 170
K K E F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE E
Sbjct: 68 KPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGME 127
Query: 171 VLEQKAK------EKGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
E+K K KG LP E+ RFDSNCITPGT FM L + LRY++ ++ +D
Sbjct: 128 AAEEKQKIRQEILAKGGILPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIADRLNSDP- 186
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIM
Sbjct: 187 --------GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIM 238
Query: 282 LGLCTHEPYFSLLREEVKFNTK-----SNKGGSQI--------------------VTPEE 316
LGL THEP+F+++REE K N N+ G ++ + E
Sbjct: 239 LGLATHEPHFTIIREEFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADSLPASE 298
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
+F + L ++R+YLE E L F F E +DDWV M F +GNDF+P+LP L
Sbjct: 299 QEFIFIRLCVLREYLERELTM----ASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLE 354
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD---- 432
I GA+ L +Y+ V+ GY+ E G++NL+R + + + + F+++ D
Sbjct: 355 IREGAIDRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNF 414
Query: 433 ---------------------IQYLEGKMGKK-------------FSDVFHKEKSKEM-- 456
Q+ +G + F H ++ M
Sbjct: 415 KRRQKEKKKRMKRDHPSFIPGGQFSPQALGNRSSPQAISNPRQTAFEMRMHDRQNSTMSS 474
Query: 457 ---------DPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQH 507
P A IK +D D E N +E W+ ++
Sbjct: 475 PNTSLNSDGSPSPARGIKRKSEDSDSEPEPEDNIRLWE--------SGWKQRYYKN---- 522
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K D + R + Y+ + W L YYY GC SW+WYYP HYAP+ SD +
Sbjct: 523 -------KFDVDASDEKFRRKVVQSYVEGLCWVLRYYYQGCASWNWYYPFHYAPFASDFE 575
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LMT S I+++YPE+FA D
Sbjct: 576 GIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAID 635
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 636 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVLFV 685
>gi|254582643|ref|XP_002499053.1| ZYRO0E02486p [Zygosaccharomyces rouxii]
gi|238942627|emb|CAR30798.1| ZYRO0E02486p [Zygosaccharomyces rouxii]
Length = 1526
Score = 382 bits (980), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/440 (45%), Positives = 266/440 (60%), Gaps = 76/440 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFF+YI+ER+P + +++ IPEFDNLYLDMN I+H C+H ND+D R+TE
Sbjct: 1 MGIPKFFKYIAERWPMILQLIEGQHIPEFDNLYLDMNSILHTCTHGNDDDVTKRLTE--- 57
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+++F I F+ ID +
Sbjct: 58 -EEVFGKI-------------FVYIDHL-------------------------------- 71
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
F T+K PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA E G
Sbjct: 72 ---------FHTIK---PKKVFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALKKAIENG 119
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
E +P + FDSN ITPGT FM +L + L+YF+ KIT D W+DV +I SG
Sbjct: 120 EEIPKGEPFDSNSITPGTEFMAKLTKNLQYFIHDKITNDS---------SWRDVKIIFSG 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HE PGEGEHKIMD+IR ++ + DYNPN RHC+YGLDADLIMLGL H P+F+LLREEV F
Sbjct: 171 HEVPGEGEHKIMDFIRNIRGQGDYNPNTRHCIYGLDADLIMLGLSVHAPHFALLREEVVF 230
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
K G + E F+LLH+SL+R+Y+ELEF ++ + L F + E I+DD++L+
Sbjct: 231 ----GKRGKKSTALEHQNFYLLHISLLREYMELEFEEIADE--LQFEYDFERILDDFILI 284
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F+IGNDF+PNLPDLH+ A PLL K ++E L DGYIN G +NLK +L L+
Sbjct: 285 MFVIGNDFLPNLPDLHLNKEAFPLLMKTFKEALLHADGYINYNGQINLKTLRLWLHYLSQ 344
Query: 421 FDFEQFREKYADIQYLEGKM 440
F+ F + D+Q+ ++
Sbjct: 345 FELMIFEKNDIDVQWFHQRL 364
Score = 303 bits (775), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 226/771 (29%), Positives = 366/771 (47%), Gaps = 66/771 (8%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
+E ++ + + + F K YY KL ++ E L D E Y+ +QW L+YYY GC S
Sbjct: 494 EELDKEKETYNARFEDWKDRYYKEKLGFSIHDTEKLTDITENYVEGLQWVLYYYYRGCAS 553
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
W WYY +HYAP ISD++ L++E G PF PFQQL+AVLP SK L+P P++ LM
Sbjct: 554 WGWYYHYHYAPRISDLQLGLDQILEFEKGIPFTPFQQLMAVLPERSKNLIPAPFRPLMYD 613
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
E SPI+++YP E TD NGK DWEAVVLI F+DE +L AM + LT +E++RN G
Sbjct: 614 EKSPIIDFYPAEVDTDKNGKTADWEAVVLISFVDEKRLQDAMAPLMSKLTPDEKARNTAG 673
Query: 671 PMLVYTYSNVNLGTALAP--DYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL 728
L+Y+++ +P F I NH VE+ + V ++ R GL + +
Sbjct: 674 TDLIYSFNPQVDDIYKSPLKGLFSDIEHNHCVEREF--NPPKVEESQFRYGLLPNAKTGI 731
Query: 729 -YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVP---SLKQVADQILGK 784
+ FPTLK + FT ++ + ++F PS+ ES+++ + SL +A + + K
Sbjct: 732 NLLAGFPTLKTLPFTFELLLNETRIFTSPSKRESMVLHMKDIYSENNLSLDVLAKRYMDK 791
Query: 785 TIFINYPHLIEIRVQAVATKDSRIS----------------FDKNSGPVFERAAKDMQDA 828
++ +P+L+E ++ +++ ++ D+ +F A +++
Sbjct: 792 VVYTRWPYLMESKLVSISDGENIFESSNSGSGKNSKFINRPLDEGEKRLFRTMAAKLKNE 851
Query: 829 FQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAY 888
+Q +K VD+G+ V+V P RG +++F Y
Sbjct: 852 YQSAK-----------AVDVGDVSVIVKVLP--GADLVRDARG--AYRKSFQNEPKYYPL 896
Query: 889 QSAVLNLQQARESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLS 945
Q V + E + K ID+ F G Q L + Y GG + +KL+
Sbjct: 897 QLMVETVANEDERYKEKDPVPIDQEFPQGSQVIFLGD--YAYGGETTIDGYSNATRLKLT 954
Query: 946 FK---VQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGA 1002
K ++ EP + + D + Y PSY V+ +L + PL LSR T I D +
Sbjct: 955 VKKMSMRSEPAIGKERYKIDTALVKYFPSYIVSKRLQLHPLFLSRITSRFMISD---QAG 1011
Query: 1003 KRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSS 1062
K N+G+ +KF ++++V+G+ RR+ K W Y+ + LI Y K FP+ F L
Sbjct: 1012 KNVNVGITVKFEARHQKVLGYARRN--PKGWEYSNLALDLINEYRKLFPKFFNKLATIQG 1069
Query: 1063 DDIYLRDDVFPHQGEQRVAQIV----SWLKEQPHAKAEVRPCGAAVVDAKVVSL---IEH 1115
++ D +FP ++ A+++ +WLK V ++ + ++ IE
Sbjct: 1070 SNMPSIDQLFPELSSEQCAKLLQDVTAWLKSVTEKFVNVSLESDSLTKVSMQAVEDYIEK 1129
Query: 1116 AVDTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRG 1175
++ EK+ V + PK + L +F+L DRVV I+D VPL +G
Sbjct: 1130 YSSYLDQTEKKQLAKVPCEAVLDPKSSYALLR---SQRFELGDRVVYIQDSGKVPLFSKG 1186
Query: 1176 TIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
T++G S V+FD G R +RG + A ++NL+
Sbjct: 1187 TVVGYTTLGMSLSIQ--VLFDNEIVAGNNFGGRLRTNRGLGLDASFLLNLT 1235
>gi|328788352|ref|XP_392371.3| PREDICTED: 5'-3' exoribonuclease 2 homolog [Apis mellifera]
Length = 948
Score = 382 bits (980), Expect = e-102, Method: Compositional matrix adjust.
Identities = 263/783 (33%), Positives = 389/783 (49%), Gaps = 160/783 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIH--NCSHPNDNDPHFRITE 57
MGVP FFR++S +YP + E + + I NGI N + PN N F
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKPI--------TTNGIRVPVNSAEPNPNGIEF---- 48
Query: 58 KQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 117
++ D+ I+ P+ D AP+ E E++E E
Sbjct: 49 DNLYLDM---NGIIHPCTHPE-------DRPAPQ--------------NEDEMME-AIFE 83
Query: 118 KGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-------E 170
+RL + P+KL +MAIDGVAPRAKMNQQR RRFR++KEA +
Sbjct: 84 CIDRL----------FRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKEANEKINEIK 133
Query: 171 VLEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTL 226
+ + KG LP EK FDSNCITPGTPFM RL + L Y++ ++ D
Sbjct: 134 RIRSELSLKGASLPPEKPKEEHFDSNCITPGTPFMARLSKCLHYYIHDRLNNDP------ 187
Query: 227 SLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCT 286
W+++ VILS PGEGEHKIMD+IR +++PD++PN +H L G DADLIMLGL T
Sbjct: 188 ---GWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIMLGLAT 244
Query: 287 HEPYFSLLREEVKFN------------------TKSNKGGSQIVTP--EETKFFLLHLSL 326
HEP F+++REE K N T + + P E ++ + L++
Sbjct: 245 HEPNFTIIREEFKPNKPKPCDICGQLGHEMQECTGAEPNQREEANPFGSECQYIFVRLNV 304
Query: 327 MRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLY 386
+R+YLE E L+ P L F + E +IDDWV M F +GNDF+P+LP L I GA+ L
Sbjct: 305 LREYLERE---LQMPN-LPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLV 360
Query: 387 KVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD-------------- 432
+Y++ + G++ + G +NL R + +++L + E F+++ +
Sbjct: 361 NLYKKTVYKTGGFLTDSGDVNLDRVQLIMSELGDVEDEIFKKRQQNELAYKQREKDKKRR 420
Query: 433 --------------IQYLEGKMGKKFSDV----------------FH---KEKSKEMDPD 459
Q+ ++G+ V +H K +KEM
Sbjct: 421 LLGISNNKPKWIPTGQFAPTRIGEHIKPVQNARYEAYQMRIHGQNYHTSEKGNAKEM--- 477
Query: 460 LAALIKATDD-DYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDY 518
L ++I+ + D++ + + + ++ DE W F K YY K D
Sbjct: 478 LESMIRPENSTDHERKRKSEVVEDDSDDDQSHDEVRLWEDGF-------KDRYYESKFDV 530
Query: 519 AKVTNEVLRDQ-AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYE 577
+ N V R+ A Y+R + W L YYY GC SW WY+P+HYAP+ SD + L+ ++E
Sbjct: 531 SP-DNLVFRNNVALQYVRGLCWVLRYYYQGCASWKWYFPYHYAPFASDFINIGGLSTEFE 589
Query: 578 MGE-PFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEA 636
G PF P +QL+ V PAAS + +P P+ LM+ SPI+++YPE+F DLNGKK W+
Sbjct: 590 KGTIPFRPLEQLMGVFPAASSKHVPAPWAKLMSDPKSPIIDFYPEDFKIDLNGKKFAWQG 649
Query: 637 VVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINE 696
V L+PF+DE +L KA++ LT+ E+ RN G +Y V LG + ++ +
Sbjct: 650 VALLPFVDEKRLFKALEPYYDCLTEAEKIRNVRGDDRLY----VGLGNS-GYNFMKGLYT 704
Query: 697 NHA 699
NH
Sbjct: 705 NHV 707
>gi|118355816|ref|XP_001011167.1| XRN2 [Tetrahymena thermophila]
gi|89292934|gb|EAR90922.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 1065
Score = 381 bits (979), Expect = e-102, Method: Compositional matrix adjust.
Identities = 257/765 (33%), Positives = 366/765 (47%), Gaps = 168/765 (21%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPH 52
MGVP FFR++ R P E E PE DNLYLDMNGIIH C + +
Sbjct: 1 MGVPAFFRWLCARNPQFILDAHENYEEFDAESNNPEIDNLYLDMNGIIHPCCRSDGS--- 57
Query: 53 FRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLE 112
I H I+ +F I F+ +D +
Sbjct: 58 --------VVPIAHTIQDMFNNI------FLYVDKL------------------------ 79
Query: 113 QKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVL 172
+ C PKK+ +MAIDGVAPRAKMNQQR RRF+ AKEA L
Sbjct: 80 --------------------MDLCRPKKILYMAIDGVAPRAKMNQQRARRFKGAKEAVEL 119
Query: 173 EQKAKEKGERLP------------TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
+QK +E + RFD+N ITPGT FM L L+++V ++
Sbjct: 120 QQKKEELLNEFRERSEINDDVLAFVQNRFDTNVITPGTAFMRDLSMALQHYVIERMNKHP 179
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
L+KD + VI S PGEGEHKI+D+IR + + +Y+PN +HCLYG DADLI
Sbjct: 180 LFKD---------IKVIFSDASIPGEGEHKILDFIRVQRDQQNYDPNTKHCLYGADADLI 230
Query: 281 MLGLCTHEPYFSLLREEV------KFNTKSNKGGSQIVTPEET----------------- 317
MLGL THEPYF ++RE++ + + G Q+ P E
Sbjct: 231 MLGLSTHEPYFYIIREQIITQEEKRCSICQQTGHFQMDCPNEMAVEAGQKPISQKILQAQ 290
Query: 318 ----------KFFLLHLSLMRDYLELEFGKL----KEPGVLSFPFSIENIIDDWVLMGFL 363
F L +MR YL + F K+ L + IE IIDD+V M F
Sbjct: 291 EQKVRKGITQSFQFAKLYVMRQYLNMRFSKVLFNDNLECKLKMQYDIERIIDDFVFMCFF 350
Query: 364 IGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASF-- 421
+GNDF+P++P+L I +G + L +Y + +D Y+ G LNLK+ K L +A
Sbjct: 351 VGNDFLPHIPNLSIRDGGIDALLTLYDHTITQVDDYLTCNGELNLKQVAKLLENMAIVEE 410
Query: 422 DFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALI-KATDDDY--------- 471
D +FR+ D D ++E +KE + L L ++++Y
Sbjct: 411 DLMKFRKDKED------------RDKKNQEINKEKEARLQELRPHISEEEYQKKRKEWRL 458
Query: 472 -DDGTEEVLNYANYEEYY---YSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAK------- 520
D+ E++N + + + S+ E +T + T Y+YKL Y
Sbjct: 459 KDEKKVEIINNESLLQRFKRILSERSNEAKTIKEVKESTQITLNYNYKLSYYNDKFGVKP 518
Query: 521 ---VTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYE 577
+ + L Q+ Y+ A+ WN YYY GC+SWSWYYP HY+P+ SD+ D +++E
Sbjct: 519 EDFIQMQWLIKQS--YVEALCWNFAYYYKGCISWSWYYPFHYSPFASDLIDIDQHIIEFE 576
Query: 578 MGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAV 637
GEPF PF QLL+V P AS +PE ++ LM S I ++YP +F DL GKK +W
Sbjct: 577 RGEPFKPFYQLLSVFPPASALSVPECFRPLMIEPTSEIADFYPIDFYVDLIGKKFEWLGE 636
Query: 638 VLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPM-LVYTYSNVN 681
V++PFI+E +L++A EHLL+ EE+ RN G + + Y +++N
Sbjct: 637 VILPFIEEERLLRAARKYEHLLSPEEKQRNTPGKIQIFYNQTSIN 681
>gi|312371117|gb|EFR19377.1| hypothetical protein AND_22598 [Anopheles darlingi]
Length = 380
Score = 381 bits (979), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/325 (57%), Positives = 230/325 (70%), Gaps = 17/325 (5%)
Query: 120 ERLPTEKRFDFI--TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 177
E + E F ++ K P+K+FF+A+DGVAPRAKMNQQRGRRFRSA EA + A
Sbjct: 57 EEMIFEGIFHYVEYLFKMIRPQKVFFIAVDGVAPRAKMNQQRGRRFRSAHEAGEQLKAAI 116
Query: 178 EKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVI 237
KGE +P E RFDSNCITPGT FM RL + L +F+++KI TD LWK VI
Sbjct: 117 AKGETIPDEDRFDSNCITPGTAFMVRLQKALEHFIQVKIATDILWKAC---------TVI 167
Query: 238 LSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE 297
LSGHETPGEGEHKIM+YIR+ K++P +NPN RHCLYGLDADLIMLGLCTHE +FSLLREE
Sbjct: 168 LSGHETPGEGEHKIMEYIRHAKAQPGFNPNTRHCLYGLDADLIMLGLCTHERFFSLLREE 227
Query: 298 VKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDW 357
VKF K +E +F+LLHL+L+ +YLELEF ++ L FPF I +IDDW
Sbjct: 228 VKFGKNDKKA----TVMKEIRFYLLHLTLLSEYLELEFASVRNK--LRFPFDIHKLIDDW 281
Query: 358 VLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTK 417
+LM +L+GNDFIP+LP+LHI ALP LY+ Y +VLP +DGYINE G LNL R + + +
Sbjct: 282 ILMIYLVGNDFIPHLPNLHINENALPTLYRAYMDVLPEMDGYINESGILNLPRLQLLMRR 341
Query: 418 LASFDFEQFREKYADIQYLEGKMGK 442
LA FD + F E Y D++YLE K GK
Sbjct: 342 LAVFDRDTFLEHYTDLKYLESKCGK 366
Score = 210 bits (534), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 111/129 (86%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE++RE Q+PEFDNLYLDMNGIIHNCSHPND D +RI+E+ I
Sbjct: 1 MGVPKFFRYISERYPCLSELLRENQVPEFDNLYLDMNGIIHNCSHPNDADVTYRISEEMI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F+ IFHY+E LF+MI+P+K+FF+A+DGVAPRAKMNQQRGRRFRSA EA + A KGE
Sbjct: 61 FEGIFHYVEYLFKMIRPQKVFFIAVDGVAPRAKMNQQRGRRFRSAHEAGEQLKAAIAKGE 120
Query: 121 RLPTEKRFD 129
+P E RFD
Sbjct: 121 TIPDEDRFD 129
>gi|340959829|gb|EGS21010.1| 5'-3' exoribonuclease 1-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1461
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/441 (45%), Positives = 273/441 (61%), Gaps = 77/441 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEF +C + + N T K +
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEF------------DCLYLDMNGIIHNCTHKDV 48
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
D H FR+ + + F+AI
Sbjct: 49 --DDVH-----FRLTEEE--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PKKLFFMA+DGVAPRAKMNQQR RRFR+A +AE +KA
Sbjct: 65 -------FNYIEHLFGKIKPKKLFFMAVDGVAPRAKMNQQRARRFRTALDAERAREKALR 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G+ LP E+ FDSNCITPGT FM +L QL+YF+ K++ D+ W+ ++L
Sbjct: 118 EGKELPKEEPFDSNCITPGTEFMAKLSLQLKYFINKKVSEDRDWQGP---------EIVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR +++PDYNPN RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRNARAQPDYNPNTRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F ++ ++ E F+LLHL ++R+YLELEF +LKEPG + FPF +E +IDD++
Sbjct: 229 TFGRQAKHKSKEL---EHQNFYLLHLCIVREYLELEFQELKEPGAIPFPFDMERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP LHI GAL L++K+Y++VLP DGYINE G +NL R + L +L
Sbjct: 286 LMAFFVGNDFLPNLPRLHINEGALALMFKIYKKVLPKCDGYINENGKVNLDRLKILLEEL 345
Query: 419 ASFDFEQFREKYADIQYLEGK 439
++ F +++ D ++L+GK
Sbjct: 346 EQEEYRFFEQEHEDTKWLQGK 366
Score = 339 bits (870), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 247/747 (33%), Positives = 381/747 (51%), Gaps = 45/747 (6%)
Query: 503 EFGQHKTDYYHYKLDYAKVTN--EVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYA 560
+F + K YY K+D N + L+ AE Y++ +QW L+YYY G SW W+Y +HYA
Sbjct: 500 KFQEWKDKYYLSKMDGWTPQNLEQELKKMAENYVQGLQWVLYYYYRGIASWPWFYGYHYA 559
Query: 561 PYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYP 620
P ISD+ +L +++G+PF P +QL+ VLP SK+++P+ Y +LMT NSPI+++YP
Sbjct: 560 PMISDVVKGLGADLNFKLGQPFRPNEQLMGVLPDRSKKIVPKVYWDLMTDPNSPIIDFYP 619
Query: 621 EEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-N 679
EF DLNGKK DWEAVV IPFIDE +L++AM LLT+EE++RN G L +TYS +
Sbjct: 620 REFELDLNGKKMDWEAVVKIPFIDEKRLLEAMAPRNALLTEEEKARNEFGVPLKFTYSED 679
Query: 680 VNL--GTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQDVNLKL-YVTH 732
V+ ++L D FP I H VE +I+ P + R GL + L + +
Sbjct: 680 VDFVYPSSLV-DVFPPIFHCHCVE------NIFDLPPMEGLEYRAGLAEGALLNVEALAG 732
Query: 733 FPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPH 792
FPTL + +T + V VFQQ SRNES+I+ + + A LG+ F+ YP
Sbjct: 733 FPTLATLPYTASLAFHGVNVFQQESRNESMIVRLTDSHLRTKIDTAKVKLGQRCFVGYPF 792
Query: 793 LIEIRVQAVATKDSRISFDKN-SGPVFERAAKDMQ-DAFQLSKKSITDGYYTKLGVDIGN 850
L E +V AV+ + + + SG V ER + + ++ + I + Y +LG+ IG
Sbjct: 793 LQEAKVVAVSDELFEYTLASDGSGQVIERHHTPREIEEWKKKAERIENFYSKRLGILIGP 852
Query: 851 TEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESLEYKT--- 906
E LV ++ + G ++ + T YA Q V + E +
Sbjct: 853 VESLVTVHMLKGLRK--TDEGATVKEYGEVPGMETDYAAQIIVDEVVNEDERFIEQAALP 910
Query: 907 IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVY 966
I+E F F + + +YG V+ K+ I L+ +EP+ + + +
Sbjct: 911 IEEEFPVKSNGFFVGDYNYGQPLEVVGYTKDGKLSIWLAVPTAREPEFAKQIIHEAHRSQ 970
Query: 967 NYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRR 1026
Y PSY VA +L + PL LS+ T S ++ G R N+GLN+KF K ++V+G++ +
Sbjct: 971 LYQPSYMVAKQLGLHPLTLSKITSSYYV---RTVGDLRVNLGLNLKFESKKQKVLGYSSK 1027
Query: 1027 DETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPH--QGEQRVAQIV 1084
T W +++ V LI YM++FP+ F + + S D+FP RV +I
Sbjct: 1028 SATG--WEFSQAAVLLISEYMRRFPDFFAAIVKNPSGSELNETDLFPDPAYATARVKEIG 1085
Query: 1085 SWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTC-----EKVEKQITLFVKPNKLYIP 1139
+WLK + E P A +D+ VV + D + V K++ V N + P
Sbjct: 1086 AWLKTLKTSSMERVPLDAEQLDSDVVMRLAAKADELGLGNQQTVSKKMN-GVPRNAVIRP 1144
Query: 1140 KPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPF 1199
+ +L + F L DRVV + VP+ +RGT++GI T + + DVVFD F
Sbjct: 1145 EDAEHRLG---NQVFSLGDRVVYVARKGKVPIAFRGTVVGI--SRTPTNKLIDVVFDVTF 1199
Query: 1200 PHGVKI--RCSESRGYRMPAQAMINLS 1224
G + RC RG +P+ ++NL+
Sbjct: 1200 LSGTTLGDRCPPFRGQTVPSNVLLNLT 1226
>gi|339249025|ref|XP_003373500.1| 5'-3' exoribonuclease 2 [Trichinella spiralis]
gi|316970366|gb|EFV54322.1| 5'-3' exoribonuclease 2 [Trichinella spiralis]
Length = 820
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 263/819 (32%), Positives = 382/819 (46%), Gaps = 164/819 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP I+ NC D
Sbjct: 1 MGVPAFFRWLSRKYP----------------------SIVMNCIEDTPRDVDGTTVPVDN 38
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
Q H IE F++ ++G+ E K K E
Sbjct: 39 TQPNPHGIEF--------DTFYLDMNGII----------------HPCCHPEDKPAPKSE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I C P++L +MAIDGVAPRAKMNQQR RRFR++KEA E++ ++
Sbjct: 75 EEMMVAIFEYIDRLMCIVRPRRLLYMAIDGVAPRAKMNQQRTRRFRASKEAAEKEEQIRQ 134
Query: 179 -------KGERLPTE----KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
+G LP E + FDSNCITPGTPFM RL LRY++ ++ TD W++ L
Sbjct: 135 IREDLRAQGIPLPAESTDKQHFDSNCITPGTPFMARLAICLRYYIHERLNTDPAWQNLL- 193
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
VILS PGEGEHKIMDYIR+ ++ ++PN H L G DADLIMLGL TH
Sbjct: 194 --------VILSDASVPGEGEHKIMDYIRHQRACASHDPNTHHVLCGADADLIMLGLATH 245
Query: 288 EPYFSLLREEVKFN-------------TKSNKGGSQIVTPE----------ETKFFLLHL 324
EP F+++REE N T + G I+ E +T+F + L
Sbjct: 246 EPNFTIIREEFVPNLPRPCEICNNYGHTMQDCQGLSILENENEEAHRPVLKKTQFIFIRL 305
Query: 325 SLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPL 384
S++R+YL+ E L+ P + F + E +DDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 SVLREYLQRE---LEMPNI-KFKYDFERCVDDWVFMCFFVGNDFLPHLPSLEIREGAIDR 361
Query: 385 LYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD-----------I 433
L K+Y++ + GY+ E G++NLKR + +++L + E FR++ I
Sbjct: 362 LVKLYKDCVYRTGGYLTENGFVNLKRVQLIMSELGKVEDEIFRQRQEREAMDNIFLLDWI 421
Query: 434 QYL-EGKMGKKFSDVFH-------------------------KEKSKEMDPDLAALIKAT 467
Q+ + KM + ++ F K + EM A+ +T
Sbjct: 422 QFSNKAKMRRMQAENFDAPAFIPQNAFAPTPIGESPLPLSNAKRTAMEMRQAAMAVTSST 481
Query: 468 DDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLR 527
+++ N + + DE W + K YY K + E
Sbjct: 482 KREFNGAA----NAEDANDEGPLDEVRLWECGW-------KDRYYLVKFQCSPKDLEFRH 530
Query: 528 DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKY-EMGEPFLPFQ 586
A CY+ + W L YYY GC SW WY+P HY+P+ SD + L + + E P P +
Sbjct: 531 HVANCYVEGLCWVLRYYYQGCCSWKWYFPFHYSPFASDFLNIGDLKIDFSEKTMPIKPLE 590
Query: 587 QLLAVLPAASKELLPEPYQNLM---TLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFI 643
QL++V PAAS + LP+ + LM + S I++ YP +F DLNGK+ W+ VVL+PF+
Sbjct: 591 QLMSVFPAASSKHLPKSWAALMHDPVRDKSTIIDMYPSDFKVDLNGKRYAWQGVVLLPFV 650
Query: 644 DEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKP 703
D +L +A++ V LT+EER RN+ G L++ S +E +
Sbjct: 651 DAERLNEALEVVYPDLTEEERFRNKQGNDLLFISSK---------------HEAFDFIQS 695
Query: 704 LYRDDIYVHPNKLRKGLCQDVNL--KLYVTHFPTLKHVQ 740
+Y D+ + LC ++L K Y H P K V
Sbjct: 696 IYEGDMSAEWLNMDPSLCNGISLMVKPYKFHVPVGKTVH 734
>gi|301620220|ref|XP_002939479.1| PREDICTED: 5'-3' exoribonuclease 2 [Xenopus (Silurana) tropicalis]
gi|89271859|emb|CAJ82319.1| 5'-3' exoribonuclease 2 [Xenopus (Silurana) tropicalis]
Length = 931
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 247/734 (33%), Positives = 358/734 (48%), Gaps = 127/734 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E +N+ + ++ + PN N+ F
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHSVEEKPKECNNIKIPVD-----TTKPNPNEVEF------- 48
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+ E K K E
Sbjct: 49 ------------------DNLYLDMNGII----------------HPCTHPEDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-EVLEQKAK 177
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE E E+K +
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGVESSEEKQR 134
Query: 178 ------EKGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 IREEVLSKGGYLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P ++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASVPGEGEHKIMDYIRRQRAQPHHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTKSNKG-----GSQI----VTPEETK----------------FFLLH 323
PYF+++REE K N G G +I P E K F +
Sbjct: 246 PYFTIIREEFKPNKPKPCGLCGQFGHEIKECQGMPREKKGEHDEFADTPPGCEQEFIFIR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F E +DDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLEKELTM----ASLPFQFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKK 443
L +Y+ V+ GY+ + G++NL+R + + + + F+++ D ++ + + ++
Sbjct: 362 RLVNIYKNVVHKTGGYLTDSGFVNLERVQMIMLAVGEVEDNIFKKRKEDDEHFKRRQKER 421
Query: 444 FSDVFHKEKSKEMDPDLAALIKATDDDYDDGT---EEVLNYANYEEYYYSDEDEEWRTNF 500
+ K++ P + G+ E +N E Y ++ N
Sbjct: 422 KK----RMKAEHQKPSFVTSGQFAPRALGQGSCSVPEAINNPRQEAYRMRMQNAHSVDNA 477
Query: 501 FSEFGQH-----------------------KTDYYHYKLDYAKVTNEVLRDQAECYIRAI 537
GQ K YY K D + R + Y+ +
Sbjct: 478 SPNTGQKRKAEGSDSEPEPEDNIRLWEEGWKQRYYKNKFDVDASDEKFRRKVVQSYVEGL 537
Query: 538 QWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPFQQLLAVLPAAS 596
W L YYY GC SW W++P HYAP+ SD ++ S L ++E G +PF P +QL+ V PAAS
Sbjct: 538 CWVLRYYYQGCASWKWFFPFHYAPFASDFENISCLFKEFEKGTKPFKPLEQLMGVFPAAS 597
Query: 597 KELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVE 656
LPE ++ LM +S I+++YP++FA DLNGKK W+ V L+PF+DE +L A++ V
Sbjct: 598 GNFLPESWRRLMNDPDSSIIDFYPDDFAIDLNGKKFAWQGVALLPFVDERRLRAALEEVY 657
Query: 657 HLLTDEERSRNRHG 670
LT +E RN G
Sbjct: 658 PDLTPDETRRNSLG 671
>gi|169615619|ref|XP_001801225.1| hypothetical protein SNOG_10969 [Phaeosphaeria nodorum SN15]
gi|111060348|gb|EAT81468.1| hypothetical protein SNOG_10969 [Phaeosphaeria nodorum SN15]
Length = 1439
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 266/761 (34%), Positives = 399/761 (52%), Gaps = 54/761 (7%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
D E + + +F K DYY K ++ + E LR E Y++ +QW L+YYY G S
Sbjct: 496 DAQNEMQKKYDEKFDAWKNDYYKSKFEWDRSNEEELRKLTENYVQGLQWVLYYYYRGVAS 555
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
W WYY +HY+P ISD+K N+ +++G+PF PFQQL+ VLP SK ++P+ Y LMT
Sbjct: 556 WPWYYGYHYSPMISDVKRGIKANIDFKLGQPFKPFQQLMGVLPDRSKSIVPKAYHPLMTS 615
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
E+SPI+++YP +F D+NGKKQDWEAVV IPFI+E +L+KAM E LT +E+SRN G
Sbjct: 616 EDSPIIDFYPRDFTLDMNGKKQDWEAVVKIPFIEEDRLLKAMATKEDDLTADEKSRNSFG 675
Query: 671 PMLVYTYS---NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQD 723
L +TYS + ++L P FP + +E +IY P + GL
Sbjct: 676 VSLKFTYSRDLDFIYPSSL-PGVFPDLPHCKCIE------NIYELPTMEGLEYYIGLMDG 728
Query: 724 VNL-KLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQIL 782
V + FP+LK + F K+E A V +FQQ SRNES+ I A + L
Sbjct: 729 VKTGSAALAGFPSLKVLPFHGKLEFASVNIFQQDSRNESMTITLLDTAPRQPVSHAKEKL 788
Query: 783 GKTIFINYPHLIEIRVQAVATKDSRISFD---KNSGPVFERAAKDMQDAFQLS--KKS-- 835
GK + + YP L E +V VA + FD SGP A D+ Q+S KK+
Sbjct: 789 GKAVHVGYPFLHEAKVVKVADE----LFDYVLPESGPSVPVAIP--HDSRQISDWKKTAD 842
Query: 836 -ITDGYYTKLGVDIGNTEVLVYGQPVES-RKYFFGPRGKVTQQRTFIRSTVTYAYQSAVL 893
I Y +LG+ IG E LVY + ++ RK G + + + V YA Q+ V
Sbjct: 843 RIEKFYSKRLGIMIGEIESLVYVEMLKGLRKTDEG--ATIKEYGEVQGAGVEYATQTIVD 900
Query: 894 N-LQQARESLEYKT--IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQ 950
+ + LE + I+E F G + F L + YG V+ + + + + K +Q
Sbjct: 901 QVISEDTRFLEKEALPIEEEFPEGARAFYLGDYAYGRPLQVVGHAENKATIMVAKLK-KQ 959
Query: 951 EPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLN 1010
EPD + + + YLPSY VA L++ PL LS+ T S F ++S+ + NIGLN
Sbjct: 960 EPDFGRAIVRRAEQTTPYLPSYVVARSLNMPPLALSKLT-SAFNVNSS---GLKLNIGLN 1015
Query: 1011 IKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDD 1070
+KF K +V+G++R+ + W Y+++ + L+ YM +FP+ + ++ + D + D
Sbjct: 1016 LKFEAKKLKVLGYSRK--SANGWEYSQKAIDLLAQYMIKFPDFVAAIINNPTGDGWQDTD 1073
Query: 1071 VF-PHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDT----CEKVEK 1125
+ P +Q++ +IV+WLKE E P A +D+ V LIE A D + VE
Sbjct: 1074 FYAPEVAKQKIKEIVAWLKEVQTKSFEKVPLDAEQLDSDTVKLIEQAADANLPITQDVEP 1133
Query: 1126 QITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGET 1185
+ V N L P +L D +F + DR+V ++D VP+G GT+IG + T
Sbjct: 1134 KKIGKVPRNALLKPSDAEQRLH---DQEFTIGDRIVYVQDSGRVPIGSAGTVIG--KTRT 1188
Query: 1186 SYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
+ + DVVFD F G + RCS RG +P+ A++N++
Sbjct: 1189 ARVMLLDVVFDATFMSGTSLGDRCSPFRGSTVPSTAVLNMT 1229
Score = 379 bits (972), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/452 (43%), Positives = 267/452 (59%), Gaps = 78/452 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEF +C
Sbjct: 1 MGVPKFFRWMSERYPGISQLIAENRIPEF------------DC----------------- 31
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+ N G R +++ L+
Sbjct: 32 --------------------LYLDMNGIIHNCTHNDSDGATARKSEDQMFLDI------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE KA
Sbjct: 65 -------FNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARRFRTALDAEKARDKAIR 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E+ FDSNCITPGT FM +L QQL+YF+ K++ D W+ V V+L
Sbjct: 118 EGVEMPKEEAFDSNCITPGTAFMAKLTQQLKYFINKKVSEDM---------DWQGVEVVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHK+M+YIR K++P Y+PN RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKVMEYIRQAKAQPGYDPNRRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F +S ++ E F+L+HL ++R+YLELEF +L EPG L FPF +E +IDD++
Sbjct: 229 TFGRQSQTKSKEL---EHQNFYLMHLCIVREYLELEFQELAEPGALGFPFDMERVIDDFI 285
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LM F +GNDF+PNLP LHI GAL L++ VY+ VLP GYINE G +N++R L +L
Sbjct: 286 LMAFFVGNDFLPNLPHLHINEGALALMFNVYKTVLPKGKGYINEEGVINMERLVLLLDEL 345
Query: 419 ASFDFEQFREKYADIQYLEGKMGKKFSDVFHK 450
+ ++ F + AD + +GK +K DV K
Sbjct: 346 SQIEYRHFESENADAAWFKGKRLEK-EDVMQK 376
>gi|296423651|ref|XP_002841367.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637604|emb|CAZ85558.1| unnamed protein product [Tuber melanosporum]
Length = 883
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 232/692 (33%), Positives = 340/692 (49%), Gaps = 133/692 (19%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FR+++ +YP + V E Q E D + ++ N + +DN
Sbjct: 1 MGVPALFRWLTNKYPKIVSPVIEEQPQEIDGVVRAVDTTQPNPNGESDN----------- 49
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+ E E A E+
Sbjct: 50 --------------------LYLDMNGIV-------------HPCSHPEEGEPPATEEAM 76
Query: 121 RLP----TEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA------- 169
L TE+ + + P KL +A+DGVAPRAKMNQQR RRFRSA+EA
Sbjct: 77 MLAVFAYTERVVNMVR-----PNKLLMIAVDGVAPRAKMNQQRSRRFRSAQEAKEKEDET 131
Query: 170 ----EVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
E +E+ + + + +K +DSN ITPGTPFM L L+Y++ K+ D
Sbjct: 132 AQLIEQMEKHGSKFDDVIKNKKIWDSNAITPGTPFMDILAASLKYWIAKKLNDDP----- 186
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
W + +I+S PGEGEHKIM++IR + P+Y+PN RH +YGLDADLIMLGL
Sbjct: 187 ----AWAKLKIIISDSTVPGEGEHKIMEFIRSQRLSPEYDPNTRHVIYGLDADLIMLGLG 242
Query: 286 THEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLS 345
THEP+F +LRE+V F ++ +I K F
Sbjct: 243 THEPHFKVLREDV-FAKEARAKTCRIYNASPLKPF------------------------- 276
Query: 346 FPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGY 405
F +E +DDW+ M F +GNDF+P+LP L I + L V+++ +P + GY+ + G
Sbjct: 277 --FELERALDDWIFMCFFVGNDFLPHLPSLEIRENGIDTLIAVWKDNIPLMGGYVTKDGT 334
Query: 406 LNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIK 465
++LKR + L LA + + FR + I + HK K+ + D
Sbjct: 335 VDLKRVQYILDGLAKQEDQIFRNRKRTIS-------TTAPAISHKRKADMVWGDETPKTP 387
Query: 466 ATDDDYDDGTEEVLNY--ANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTN 523
++ + DD + + Y E YY + +H D + N
Sbjct: 388 GSESEADDPDRDPVRLWEPGYRERYYEQK-------------------FHVSPDNVEFRN 428
Query: 524 EVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFL 583
+V A Y+ + W L YY+ GC SW+WYYP+HYAP+ D D L+++++ G+PF
Sbjct: 429 KV----AASYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAQDFNDVGKLDIQFKKGKPFK 484
Query: 584 PFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFI 643
PF+QL+ VLPAASK LPEP+Q LMT E+S I+++YPE F DLNGKK W+ V L+PFI
Sbjct: 485 PFEQLMGVLPAASKHALPEPFQKLMTEEDSEIIDFYPESFPIDLNGKKFAWQGVALLPFI 544
Query: 644 DEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
DE +L+ A+ V LT E+ +RN G L++
Sbjct: 545 DEKRLLDAVSKVYPTLTPEDDARNAMGHDLLF 576
>gi|321474178|gb|EFX85144.1| hypothetical protein DAPPUDRAFT_194028 [Daphnia pulex]
Length = 827
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 256/744 (34%), Positives = 369/744 (49%), Gaps = 147/744 (19%)
Query: 1 MGVPKFFRYISERYP-----CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI 55
MGVP FFR+++ +YP C+ E VR P+ L +D+ S PN N F
Sbjct: 1 MGVPAFFRWLTVKYPSVICDCIEEKVR--HGPDGKALPVDV-------SKPNPNGVEF-- 49
Query: 56 TEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA 115
++ D+ I+ P+ D APR E E++
Sbjct: 50 --DNLYLDMNG---IIHPCTHPE-------DRPAPR--------------NEDEMMVAI- 82
Query: 116 KEKGERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAE--- 170
F+ I F P+KL +MAIDGVAPRAKMNQQR RRFR++KE
Sbjct: 83 ------------FECIDRMFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKEIAEKV 130
Query: 171 ----VLEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
+ + +G +P+EK FDSNCITPGTPFM RL L Y+V ++ D
Sbjct: 131 MTIATVRESLMARGAYVPSEKSKGEHFDSNCITPGTPFMHRLSACLHYYVHDRLRNDP-- 188
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK+V VILS PGEGEHKIMDYIR +++P ++PN RH L G DADLIML
Sbjct: 189 -------GWKNVSVILSDANVPGEGEHKIMDYIRRQRAQPSHDPNTRHVLCGADADLIML 241
Query: 283 GLCTHEPYFSLLREEVKFNT---------------------KSNKGGSQIVTPE---ETK 318
GL THEP F+++REE K N ++ G + + P E
Sbjct: 242 GLATHEPNFTIIREEFKPNKPRPCEICNQIGHDLNDCQGAERTKYGENDEIGPNIAAEQN 301
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
+ + L ++R+YLE E L+ P L F + +E IDDWV M F +GNDF+P+LP L I
Sbjct: 302 YIFVRLYVLREYLERE---LRMPN-LPFEYDLERAIDDWVFMCFFVGNDFLPHLPSLEIR 357
Query: 379 NGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD------ 432
GA+ L +Y++ + G++ + G++NL+R + L++L + E FR++ D
Sbjct: 358 EGAIDRLVNLYKDCVYKTKGWVTDSGFVNLERVQIILSQLGHAEDEIFRKRQEDELSFRK 417
Query: 433 ----------------------IQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD 470
Q+ +G+ FS+ +E+ L +A + +
Sbjct: 418 RMRNKNKRFGGGGGSRPAHLPQGQFAPRAVGRGFSNPSITNAHQEI---LQGRQQAQNTE 474
Query: 471 YDDGTEEVLNYA---NYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLR 527
+ +L A + E+ + DE W F K YY K E
Sbjct: 475 AAIKLKAMLRSAVNDDDEDDFSHDEVRLWEDGF-------KERYYESKFAVPPTDEEFRS 527
Query: 528 DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPFQ 586
A Y+R + W L YYY G SW W++P+HYAP+ SD D S + ++ G +PF P +
Sbjct: 528 KVALEYVRGLCWVLQYYYQGVPSWKWFFPYHYAPFASDFLDISSVITVFKKGTKPFRPLE 587
Query: 587 QLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEV 646
QL+ V PAAS+ +P+P+ LM SPI+++YPE+F DLNGKK W+ V L+PF+DE
Sbjct: 588 QLMGVFPAASRSHVPQPWGELMVDPESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEK 647
Query: 647 KLIKAMDAVEHLLTDEERSRNRHG 670
+L KA+ ++ LT++E+ RN G
Sbjct: 648 RLKKAVKSLFDELTEDEKRRNVLG 671
>gi|410730385|ref|XP_003671372.2| hypothetical protein NDAI_0G03520 [Naumovozyma dairenensis CBS 421]
gi|401780190|emb|CCD26129.2| hypothetical protein NDAI_0G03520 [Naumovozyma dairenensis CBS 421]
Length = 1548
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/440 (44%), Positives = 270/440 (61%), Gaps = 75/440 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P + +++ QIPEFDNLYLDMN I+H C+H ND+D R+TE
Sbjct: 1 MGIPKFFRYISERWPMILQLIEGTQIPEFDNLYLDMNSILHTCTHGNDDDVTKRMTE--- 57
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+++F I F ID +
Sbjct: 58 -EEVFAKI-------------FTYIDHL-------------------------------- 71
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
F T+K PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE QKA E G
Sbjct: 72 ---------FQTIK---PKKVFYMAIDGVAPRAKMNQQRSRRFRTAMDAENALQKALENG 119
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
E +P + FDSN ITPGT FM +L + L+YF+ KI+ D W++V +I SG
Sbjct: 120 EEIPKGEPFDSNSITPGTEFMAKLTKNLKYFIHEKISNDA---------QWREVEIIFSG 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HE PGEGEHKIMD+IR ++++ ++ N RHC+YGLDADLI+LGL TH P+F+LLREEV F
Sbjct: 171 HEAPGEGEHKIMDFIRTLRAQKGFDHNTRHCIYGLDADLIILGLSTHAPHFALLREEVVF 230
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
++ +Q T E F+LLHLSL+R+Y+ELEF ++ + + F F E ++DD+VL+
Sbjct: 231 GRRN---PNQAKTLENQNFYLLHLSLLREYMELEFKEIADE--MQFEFDFERVLDDFVLV 285
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F+IGNDF+PNLPDLH+ GA +L + ++E L DGYINE G +NL+R +L L+
Sbjct: 286 MFVIGNDFLPNLPDLHLNKGAFVVLLQTFKEALLHSDGYINEHGKINLERLRVWLQYLSQ 345
Query: 421 FDFEQFREKYADIQYLEGKM 440
F+ F + D+++ ++
Sbjct: 346 FELMNFEKNDIDVEWFNQQL 365
Score = 287 bits (735), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 228/771 (29%), Positives = 364/771 (47%), Gaps = 62/771 (8%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCV 549
+DE + + + + F K DYY KL + E + + Y+ +QW L+YYY GC
Sbjct: 494 ADELQREQDLYNTRFESWKKDYYKDKLGFKADIEENITKLTKNYVEGLQWVLYYYYRGCP 553
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMT 609
SW WYY +HYAP ISD++ +++ PF PF+QL++VLP SK L+P + LM
Sbjct: 554 SWGWYYRYHYAPRISDLEKGLDQVIEFAKDNPFKPFEQLMSVLPERSKNLIPPVLRPLMY 613
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
SPIL++YP E D NGK DWEAVVL+PF+DE +LI AM L+ EE++RN
Sbjct: 614 DPKSPILDFYPTEVKLDKNGKTADWEAVVLLPFVDETRLIDAMKPYLSKLSPEEKARNSF 673
Query: 670 GPMLVYTYS-NVNLG-TALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLK 727
G L +T++ V+L + F + +H VEK Y N + L +
Sbjct: 674 GKPLTFTFNPQVDLVYKSPLSGLFSDLEHDHCVEKE-YSQPSMEGLNFIYGLLPKAKTGT 732
Query: 728 LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKV---QVPSLKQVADQILGK 784
+ FPTL + F +++E + VFQQPSR +S+++ D + +L++++ + +G+
Sbjct: 733 ELLAGFPTLLTLPFKYQLEYNESLVFQQPSRQQSMVLHMDDIYEENNLTLEELSKRYIGR 792
Query: 785 TIFINYPHLIEIRV------QAVATKDSRISFDKNSGPVFERAAKDMQDA--FQLSKKSI 836
I+ +P+L E ++ + V + I DK + + D D F KKS+
Sbjct: 793 IIYTRWPYLRESKLIGLMNEETVYERKEHIDADKKRHHTRIKRSADNADKKLFNSLKKSM 852
Query: 837 TDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQ 896
Y + V + + +V PV T+ F+++ YA Q LQ
Sbjct: 853 LRNYSKQKAVILDDIRAIVKVLPVVGLTR--------TENGAFVKN---YASQPDYYPLQ 901
Query: 897 QARESLEYKT----------IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSF 946
ES+ K I E F G L + Y GG VI +K++
Sbjct: 902 LMVESISNKDERYIEKPPLPIKEEFPEGSHAIFLGD--YAYGGEVIIDGYNNEKRLKITV 959
Query: 947 K---VQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAK 1003
K V+ EP + QD + Y+PS+ +A KL + PLLLSR T + D G
Sbjct: 960 KKRSVKAEPTIGKERAQQDRNLVQYIPSFLIAKKLGMHPLLLSRLTSKFMVAD----GNG 1015
Query: 1004 RH-NIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSS 1062
RH N+G+ +KF K+E+V+G+ R+ T+ W Y+ + LI Y +FP F L
Sbjct: 1016 RHINVGIPVKFEAKHEKVLGYARKG--TRGWEYSNLTIQLITEYKSRFPHFFEKLA-KVG 1072
Query: 1063 DDIYLRDDVFP----HQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVS---LIEH 1115
+ I + +D++P + + + QI +W+K V ++ + +++ +I+H
Sbjct: 1073 NGIPIFEDLYPDLSSSETSKMLDQIKAWVKFATEKFVVVSIESDSLTKSSIIAVEEVIQH 1132
Query: 1116 AVDTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRG 1175
EK+ V + P+ +L L KF+L DRV+ ++D VPL +G
Sbjct: 1133 YSMLPLHPEKKQLANVPRQAILSPRSSLGLLRTQ---KFELGDRVMYVQDSGKVPLFSKG 1189
Query: 1176 TIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
T++G + V+FD G R RG + A ++NL+
Sbjct: 1190 TVVGYTT--LGLNLSIQVLFDHEIVAGNTFGGRLRTKRGLGLDASFLLNLT 1238
>gi|242011511|ref|XP_002426492.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
gi|212510618|gb|EEB13754.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
Length = 869
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 256/754 (33%), Positives = 365/754 (48%), Gaps = 142/754 (18%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S++YP + E + D + + ++ + PN N F
Sbjct: 1 MGVPAFFRWLSKKYPSVIVYCVEEKPKVIDGVKISVDSL-----QPNPNGVEF------- 48
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+ E K K E
Sbjct: 49 ------------------DNLYLDMNGII----------------HPCTHPEDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE-AEVLEQKAK 177
+ FD I F P+KL ++AIDGVAPRAKMNQQR RRFR++KE AE +E+ +
Sbjct: 75 DEMMIEIFDCIDRLFSIVRPRKLLYLAIDGVAPRAKMNQQRSRRFRASKESAEKIEEITR 134
Query: 178 ------EKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
KG LP EK FDSNCITPGTPFM RL L Y++ K+ D
Sbjct: 135 LREELLNKGAYLPPEKPQESHFDSNCITPGTPFMNRLSACLDYYIHDKLNNDA------- 187
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
WK + VILS PGEGEHKIMD+IR +++PD++PN +H L G DADLIMLGL TH
Sbjct: 188 --AWKGIKVILSDASVPGEGEHKIMDFIRKQRAQPDHDPNTQHVLCGADADLIMLGLATH 245
Query: 288 EPYFSLLREEVKFN--------------TKSNKG------GSQIVTP---EETKFFLLHL 324
EP F+++REE + N K G G I T EE F + L
Sbjct: 246 EPNFTIIREEFRPNKPKPCEICSQLGHDMKDCIGCPKPLDGEMIETTTFGEEVPFIFVRL 305
Query: 325 SLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPL 384
S++R+YLE E L PG L F + E +IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 SVLREYLEKE---LTMPG-LPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREGAIDR 361
Query: 385 LYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY-------------- 430
L +Y+ + G++ + G +NL R + L +L + E F+ +
Sbjct: 362 LVNLYKNCVYKTGGFVTDSGDVNLNRVQLILNELGKVEDEIFKHRQQTELMYKRRNAAKK 421
Query: 431 -----------ADI---QYLEGKMGKKF---SDVFHKEKSKEM-------DPDLAALIKA 466
A + Q+ +G+ F + V ++ +++M + + AL+K
Sbjct: 422 RIALQYKNEIPASLPVGQFAPTPLGQNFQPPAIVSPRQTARDMRIQASHSNSHIEALLKD 481
Query: 467 TDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVL 526
+ G + L + EE DE W F K YY K D +
Sbjct: 482 ESSE-RRGNKRPLKEDSMEEEETYDEVRLWEDGF-------KDRYYESKFDVKSDNIDFR 533
Query: 527 RDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPF 585
A Y+R + W L YYY GC SW W++P+HYAP+ SD + +L+ ++E G +PF P
Sbjct: 534 IRVAHEYVRGLCWVLRYYYQGCASWKWFFPYHYAPFASDFINIGNLSTQFEKGTQPFKPL 593
Query: 586 QQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDE 645
+QL+ V P AS +P+ + LM S I+++YP +F DLNGKK W+ V L+PF+DE
Sbjct: 594 EQLMGVFPPASSSHVPKSWAVLMHDPLSSIIDFYPLDFKIDLNGKKFAWQGVALLPFVDE 653
Query: 646 VKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSN 679
+L +A+ + LLT E+ RN G +Y N
Sbjct: 654 KRLFRALAPLYDLLTPAEKIRNTQGDDKIYLGIN 687
>gi|9369381|gb|AAF87130.1|AC006434_26 F10A5.15 [Arabidopsis thaliana]
Length = 1037
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 235/640 (36%), Positives = 334/640 (52%), Gaps = 121/640 (18%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGER--- 182
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFRSAK+A + + E
Sbjct: 82 FDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRSAKDASDAAAEEERLREEFER 141
Query: 183 ----LPTE---KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
LP + + FDSN ITPGT FM L L+Y+V L++ D WK++
Sbjct: 142 EGRRLPPKVDSQVFDSNVITPGTEFMGVLSIALQYYVHLRLNHDV---------GWKNIK 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLIMLGL THE +FS+LR
Sbjct: 193 VILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLGLATHEVHFSILR 252
Query: 296 EEV----------------------------KFNTKSNKGGSQIVTPEETKFFLLHLSLM 327
E V + KG + +F LH+ ++
Sbjct: 253 EVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKGDGNDFVKKPYQF--LHIWVL 310
Query: 328 RDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYK 387
R+YLELE ++ P F +E I+DD++ + F +GNDF+P++P L I GA+ LL
Sbjct: 311 REYLELEM-RIPNP---PFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIREGAINLLMA 366
Query: 388 VYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL--------EGK 439
VY++ + DGY+ +G NLKR E+F+ + SF+ + F+++ Q GK
Sbjct: 367 VYKKEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAMQHQRQAERVKRDKAGK 426
Query: 440 MGKKFSDVFHKEKSKEMDPDLAALIKATDDDY-----------DDGTE------------ 476
K+ D ++ + PDL + + + +DG
Sbjct: 427 ATKRMDD-----EAPTVQPDLVPVARFSGSRLASAPTPSPFQSNDGRSAPHQKVRRLSPG 481
Query: 477 -----EVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYY------------------- 512
+++ N E + EE +T E + K+D +
Sbjct: 482 SSVGAAIVDVENSLESDERENKEELKTK-LKELIREKSDAFNSDTTEEDKVKLGQPGWRE 540
Query: 513 -HYKLDYAKVTNE----VLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
+Y+ ++ VT E V +D Y + W +HYY G SW W+YP+HYAP+ SD+K
Sbjct: 541 RYYEEKFSVVTPEEMERVRKDVVLKYTEGLCWVMHYYMEGVCSWQWFYPYHYAPFASDLK 600
Query: 568 DFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDL 627
D +++K+E+G PF PF QLL V PAAS LPE Y+ LMT NSPI+++YP +F D+
Sbjct: 601 DLGEMDIKFELGTPFKPFNQLLGVFPAASSHALPERYRTLMTDPNSPIIDFYPTDFEVDM 660
Query: 628 NGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
NGK+ W+ + +PFIDE +L++A+ VE LTDEE+ RN
Sbjct: 661 NGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLTDEEKRRN 700
Score = 117 bits (292), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 78/122 (63%), Gaps = 21/122 (17%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP L + +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D T +++FQ +F YI+ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPSP--TTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FR 103
FR
Sbjct: 119 FR 120
>gi|145347709|ref|XP_001418304.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578533|gb|ABO96597.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 802
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 252/735 (34%), Positives = 366/735 (49%), Gaps = 129/735 (17%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MGVP F+R+I+++YP +++VV + + + N + N N F
Sbjct: 1 MGVPSFYRWIAQKYPKIVADVVEDEPVDALGRR------VELNSAEANPNGIEF----DN 50
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
++ D+ I F P+ D AP E EV E
Sbjct: 51 LYLDMNGIIHPCF---HPE-------DRPAP--------------TTEEEVFECI----- 81
Query: 120 ERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA- 176
FD+I F P+K+ +MAIDGVAPRAKMNQQR RRFRSA+EA ++
Sbjct: 82 --------FDYIDRLFLMIRPRKVLYMAIDGVAPRAKMNQQRSRRFRSAQEAREKAEEEE 133
Query: 177 -------KEKGERLPTEKR--FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
+E + P ++ FDSN ITPGTPFM RL + L+Y+V K+ D
Sbjct: 134 KLREKLIREGVKVQPKQESGVFDSNVITPGTPFMGRLSEALKYYVHDKLNNDP------- 186
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
W+ + VI S PGEGEHK M YIR + P NPN RH +YGLDADLIML L TH
Sbjct: 187 --GWRGIEVIFSDASVPGEGEHKAMHYIRQQRGLPGANPNTRHVVYGLDADLIMLALATH 244
Query: 288 EPYFSLLREEVKFNTKSNKGGSQI-VTPEETK---------FFLLHLSLMRDYLELEFGK 337
EP+F +LRE V F K N+ + + EETK + LL +S++R+YL L+
Sbjct: 245 EPHFWILREIV-FQKKDNEAPQTLGLGTEETKKKVAIARKPYQLLSVSVLREYLALD--- 300
Query: 338 LKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLD 397
++ F E + DD++ M F +GNDF+P+ P L I GA+ LL +Y+ LPTL
Sbjct: 301 MRPVAPTPFKLDPERMFDDFIFMCFFVGNDFLPHSPTLEIREGAIDLLMTLYRNCLPTLG 360
Query: 398 GYINEGGYLNLKRFEKFLTKLASFD---FEQFREKYADIQYLEGKMGKKFSDVFHKE--- 451
GY+ G NL EKF+ ++ + F++ +K A ++ + +K D + ++
Sbjct: 361 GYLCADGRPNLSIVEKFVRLVSEHEDAIFQKRAKKEARMRSSRQRDKQKAKDYYERQRKG 420
Query: 452 ---------------------------------KSKEMDPDLAALIKATDDDYDDGTEEV 478
+ K P A A + D E
Sbjct: 421 SGTNVPQHRVLGGSRNASDRAPAAPTEQLVALGRGKPTPPPSAPKTAAENKSAADALRER 480
Query: 479 L-----NYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVT-NEVLRDQAEC 532
L A + +EE E G K YY K+ T +E++R
Sbjct: 481 LKTRGKRAAEATADAMGEREEETDNIRLGESGW-KDRYYEAKMQATPQTRDEIIRGMVIE 539
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVL 592
Y+R + W YY+ GC SWSW+YP+HYAP+ SD+ D S ++ +++G+PF PF QL+ VL
Sbjct: 540 YVRGLIWVCRYYFEGCCSWSWFYPYHYAPFASDLYDLSTISTDFDLGKPFKPFSQLMGVL 599
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAM 652
PAAS LP + LM+ ++SPI+++YPE+FA D+NGK+ W+AV L+P+ID +L++
Sbjct: 600 PAASSHALPAAFAPLMSDKDSPIIDFYPEDFALDMNGKRFTWQAVALLPWIDANRLLEQT 659
Query: 653 DAVEHLLTDEERSRN 667
+ +E+ LT EE+ RN
Sbjct: 660 EMLEYTLTAEEKRRN 674
>gi|18410905|ref|NP_565114.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana]
gi|75262832|sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3' exoribonuclease 3; AltName: Full=Protein
EXORIBONUCLEASE 3
gi|11875628|gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis thaliana]
gi|332197621|gb|AEE35742.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana]
Length = 1020
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 235/640 (36%), Positives = 334/640 (52%), Gaps = 121/640 (18%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGER--- 182
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFRSAK+A + + E
Sbjct: 82 FDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRSAKDASDAAAEEERLREEFER 141
Query: 183 ----LPTE---KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
LP + + FDSN ITPGT FM L L+Y+V L++ D WK++
Sbjct: 142 EGRRLPPKVDSQVFDSNVITPGTEFMGVLSIALQYYVHLRLNHDV---------GWKNIK 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLIMLGL THE +FS+LR
Sbjct: 193 VILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLGLATHEVHFSILR 252
Query: 296 EEV----------------------------KFNTKSNKGGSQIVTPEETKFFLLHLSLM 327
E V + KG + +F LH+ ++
Sbjct: 253 EVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKGDGNDFVKKPYQF--LHIWVL 310
Query: 328 RDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYK 387
R+YLELE ++ P F +E I+DD++ + F +GNDF+P++P L I GA+ LL
Sbjct: 311 REYLELEM-RIPNP---PFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIREGAINLLMA 366
Query: 388 VYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL--------EGK 439
VY++ + DGY+ +G NLKR E+F+ + SF+ + F+++ Q GK
Sbjct: 367 VYKKEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAMQHQRQAERVKRDKAGK 426
Query: 440 MGKKFSDVFHKEKSKEMDPDLAALIKATDDDY-----------DDGTE------------ 476
K+ D ++ + PDL + + + +DG
Sbjct: 427 ATKRMDD-----EAPTVQPDLVPVARFSGSRLASAPTPSPFQSNDGRSAPHQKVRRLSPG 481
Query: 477 -----EVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYY------------------- 512
+++ N E + EE +T E + K+D +
Sbjct: 482 SSVGAAIVDVENSLESDERENKEELKTK-LKELIREKSDAFNSDTTEEDKVKLGQPGWRE 540
Query: 513 -HYKLDYAKVTNE----VLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
+Y+ ++ VT E V +D Y + W +HYY G SW W+YP+HYAP+ SD+K
Sbjct: 541 RYYEEKFSVVTPEEMERVRKDVVLKYTEGLCWVMHYYMEGVCSWQWFYPYHYAPFASDLK 600
Query: 568 DFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDL 627
D +++K+E+G PF PF QLL V PAAS LPE Y+ LMT NSPI+++YP +F D+
Sbjct: 601 DLGEMDIKFELGTPFKPFNQLLGVFPAASSHALPERYRTLMTDPNSPIIDFYPTDFEVDM 660
Query: 628 NGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
NGK+ W+ + +PFIDE +L++A+ VE LTDEE+ RN
Sbjct: 661 NGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLTDEEKRRN 700
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 78/122 (63%), Gaps = 21/122 (17%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP L + +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D T +++FQ +F YI+ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPS--PTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FR 103
FR
Sbjct: 119 FR 120
>gi|403414808|emb|CCM01508.1| predicted protein [Fibroporia radiculosa]
Length = 1961
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/310 (57%), Positives = 229/310 (73%), Gaps = 10/310 (3%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKKLFFMAIDGVAPRAKMNQQR RRFR+AKEA + +KA+ KGE+LP K FDSNCITPG
Sbjct: 91 PKKLFFMAIDGVAPRAKMNQQRSRRFRTAKEAREVREKAESKGEKLPDTKAFDSNCITPG 150
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L QL+YFV KI+ D W DV V+LSGH+ PGEGEHKIM+YIR
Sbjct: 151 TEFMAKLSAQLQYFVNKKISEDA---------NWSDVTVVLSGHDVPGEGEHKIMEYIRL 201
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
+++PDY+PN+RHCLYGLDADLIMLGL +H+P+F LLREEVKF S GS+ + E
Sbjct: 202 SRAQPDYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVKFGPASRSKGSKSASLESI 261
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F+LLHL+LMR+YL+LEF EP VL F +S+E+IIDD++L+ +GNDF+PNLPDLHI
Sbjct: 262 NFYLLHLTLMREYLDLEFFHDIEP-VLPFSYSLEHIIDDFILLAVFVGNDFLPNLPDLHI 320
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
L L+ VY++ LP+LDGY+NE G +N KR + L ++A ++ E F ++YAD+ + +
Sbjct: 321 HENGLEKLFDVYKKSLPSLDGYLNESGVINTKRLQVILDEMAEWEREIFEKEYADLNWYK 380
Query: 438 GKMGKKFSDV 447
GK K ++
Sbjct: 381 GKQAKHVKEM 390
Score = 294 bits (753), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 217/683 (31%), Positives = 345/683 (50%), Gaps = 44/683 (6%)
Query: 537 IQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAAS 596
+QW +HYYY+G SWSW+Y +HYAP ISD+K ++ ++++G PF PF+QL+ VLP AS
Sbjct: 571 MQWVMHYYYSGVASWSWFYNYHYAPRISDLKGVDQMSFQFDLGTPFRPFEQLMGVLPEAS 630
Query: 597 KELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVE 656
KEL+P Y+ LM NSPIL++YP+EF DLNGKKQDWEA+V IPFID+ +L+ AM + E
Sbjct: 631 KELIPPAYRELMFDVNSPILDFYPQEFELDLNGKKQDWEAIVKIPFIDQDRLLSAMRSRE 690
Query: 657 HLLTDEERSRNRHGPMLVYTYSN---VNLGTALAPDYFPAINENHAVEKPLYRDDIYVHP 713
H LT +ER RN G + + + + ++L P +FPA++ +P D +
Sbjct: 691 HRLTKDERHRNAFGSSMKFFFHSGEPTEYPSSL-PGFFPALHRCMCKMEPF--DLPTLGG 747
Query: 714 NKLRKGLCQDVNLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQV 771
L +GLC V L + FP+L+ + T + + V V SRN+S+I+ +++ +
Sbjct: 748 LHLVEGLCDGVFLGAEALAGFPSLQTLPHTATLGHHGVNVHGSESRNKSMIVHIENPHER 807
Query: 772 PSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVF-ERAAKDMQD--- 827
+ +A++++G+ IFI +P L E V AV+ DS ++K P+ R K + +
Sbjct: 808 RKSEDIANEMIGRRIFIGWPFLQEGMVLAVS--DSLFKYEKV--PMIPGRPPKAVSNPHS 863
Query: 828 ----AFQLSKKSITDGYYTK-LGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
+ +K + YY+K GV GN +VL++ +P++ K G +
Sbjct: 864 PQGLSLWKAKAEKIEHYYSKRCGVIAGNIDVLLHVRPLKGLKRL--DTGAFVKDYEGQDK 921
Query: 883 TVTYAYQSAVLNLQQARESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEEN 939
V A Q AVL + K + E F G + F L YG V T +
Sbjct: 922 EVEQAVQLAVLAVVSEDPRFVEKDPPPLAEEFPEGSKVFFLGEHAYGIPAQVSDTATDTL 981
Query: 940 SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
S + F ++ + + + Y PS+ VA + +S +S+ T S +I T
Sbjct: 982 SVVLAFFPSEKAENEKFKSIAANRMSHAYFPSFKVADMVGLSGRAISKITSSFMVI--TG 1039
Query: 1000 EGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKD 1059
+G K +N+GL++KF K +V+ ++R+D + W ++E+ V I Y +++PEV L D
Sbjct: 1040 DGQK-NNLGLSLKFEAKGLKVIDYSRKD--GRYWEFSEKAVDFIHEYKQKYPEVMRSL-D 1095
Query: 1060 HSSDDIYLRDDVFP-HQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD 1118
S D + DVF + +V ++ +WL + E + + V IE D
Sbjct: 1096 RSGDAMLKASDVFSGSHADAKVKEVRNWLNSKGVRDFEPVSLFCDQLKKETVREIEQLAD 1155
Query: 1119 TCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDT------KFKLFDRVVNIRDCYTVPLG 1172
+ + K K IP+ + L P T F L DRV ++D VPL
Sbjct: 1156 SISE-HKSAAAIKKAMVKGIPRQAV--LKPSHATYRLQNQHFALGDRVTMVQDTGGVPLS 1212
Query: 1173 YRGTIIGIVQGETSYDAMYDVVF 1195
+G +IG+ S D ++D F
Sbjct: 1213 IKGVVIGM--NAKSMDVVWDAAF 1233
Score = 199 bits (506), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/127 (70%), Positives = 107/127 (84%)
Query: 3 VPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQ 62
+PKFFRYISERYP S++++E +IPEFDNLY+D NGIIHNCSHPND D HFR++E+QIF
Sbjct: 17 IPKFFRYISERYPLTSQLIQENKIPEFDNLYVDFNGIIHNCSHPNDGDAHFRLSEEQIFT 76
Query: 63 DIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERL 122
IF Y++ LF I+PKKLFFMAIDGVAPRAKMNQQR RRFR+AKEA + +KA+ KGE+L
Sbjct: 77 SIFAYVDHLFGKIKPKKLFFMAIDGVAPRAKMNQQRSRRFRTAKEAREVREKAESKGEKL 136
Query: 123 PTEKRFD 129
P K FD
Sbjct: 137 PDTKAFD 143
>gi|403216681|emb|CCK71177.1| hypothetical protein KNAG_0G01190 [Kazachstania naganishii CBS
8797]
Length = 1493
Score = 375 bits (963), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/440 (43%), Positives = 268/440 (60%), Gaps = 74/440 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P +S+++ QIPEFDNLYLDMN I+H C+H ND+D +T++
Sbjct: 1 MGIPKFFRYISERWPMISQLIEGSQIPEFDNLYLDMNSILHTCTHGNDDD----VTKRMT 56
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+++F I F ID +
Sbjct: 57 EEEVFAKI-------------FSYIDHL-------------------------------- 71
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
F+T+K P+K+F+MAIDGVAPRAKMNQQR RRFR+A +AE + +KA ++G
Sbjct: 72 ---------FLTIK---PQKVFYMAIDGVAPRAKMNQQRSRRFRTAMDAENMLKKALQRG 119
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
E +P+ + FDSN ITPGT FM +L + L+YF+ KI+ D W DV +I SG
Sbjct: 120 EEIPSGEPFDSNSITPGTEFMAKLTKNLKYFIHDKISNDSNWSG--------DVEIIFSG 171
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HE PG G HKIM +IR ++S+ ++ N RHC+YGLDADLIML L H P+F+LLREEV F
Sbjct: 172 HEVPGRGRHKIMSFIRNLRSQDGFDNNTRHCIYGLDADLIMLSLSAHAPHFALLREEVVF 231
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
+ G + EE FFLLH+SL+R+Y+ LEF ++ + L F + E ++DD++L+
Sbjct: 232 GGRR---GQRPKALEEQNFFLLHISLLREYMGLEFQEIADE--LKFTYDFERVLDDFILV 286
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F+IGNDF+PNLPDLH+ GA P+L + ++E L LDGYINE G +NL R + +L L+
Sbjct: 287 MFVIGNDFLPNLPDLHLNKGAFPVLLQTFKEALLHLDGYINENGQINLHRLKVWLDYLSQ 346
Query: 421 FDFEQFREKYADIQYLEGKM 440
F+ F K D+ + ++
Sbjct: 347 FELMNFERKDIDVDWFNQQL 366
Score = 315 bits (807), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 224/754 (29%), Positives = 374/754 (49%), Gaps = 55/754 (7%)
Query: 504 FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYI 563
F + K YY KL Y ++ + D + Y+ +QW L+YYY GC SW WYY HHYAP I
Sbjct: 512 FDKWKNQYYKEKLGYGSQDDDKIVDLTKNYVEGLQWVLYYYYRGCPSWGWYYQHHYAPRI 571
Query: 564 SDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEF 623
SD+ +K+++G PF PF+QL+AVLP SK L+P + LM NSPI+++YP
Sbjct: 572 SDLARGLDQIIKFDLGRPFTPFEQLMAVLPERSKNLIPAALRPLMYDPNSPIIDFYPASV 631
Query: 624 ATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS--NVN 681
D+NGK DWEAVVL+ F+DE +L++AM LT EER RN G L + ++ N
Sbjct: 632 KLDMNGKTADWEAVVLLSFVDEQRLVEAMKPYLAKLTPEERERNSFGVDLRFAFNPQTDN 691
Query: 682 LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKHVQ 740
+ + F I NH +E+P + + +++R GL D + + FPTLK +
Sbjct: 692 VYKSPLSGIFADIEHNHCIERP--HELKQLADSEIRYGLLPDAKMGTELLAGFPTLKTLP 749
Query: 741 FTHKIENAKVKVFQQPSRNESIIIVQDKVQVP---SLKQVADQILGKTIFINYPHLIEIR 797
F ++E + VFQQPSR +S+ + + + + +++A + + K ++ +P L E R
Sbjct: 750 FKDELEYNESHVFQQPSRQQSVCLKMEDIYKENNLTAEEIAKRYINKVVYTRWPFLRESR 809
Query: 798 VQAVATKDSRISF-------DKNSGPVFERAAK-DMQDAFQLSKKSITDGYYTKLGVDIG 849
+ +V ++ F +K +G + ER A Q + KKS+ Y + V +
Sbjct: 810 LVSVCDSNTVFEFKETGKQNEKRTGRIVERKADIHEQKKYSSLKKSLMRDYAKRKAVILD 869
Query: 850 NTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQ------QARESLE 903
N V++ +PV + +TF +T + Q V ++ + RE+L
Sbjct: 870 NIRVIIEVEPVTG----LVRNSEGAYVKTFSSNTEFFPLQLMVESISNVDIRYKEREAL- 924
Query: 904 YKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFK---VQQEPDLSDLVHL 960
I E F G + L + YG G I+ E +K++ K V+ EP + +
Sbjct: 925 --PISEEFPEGSRAIFLGDYAYG-GETTINGYSNEKK-LKITVKKRLVKAEPTIGREMVE 980
Query: 961 QDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEV 1020
D + Y PS+ VA +L ++ L LSR T + D T KR N+G+ +KF KNE+V
Sbjct: 981 HDRKMVQYYPSFAVAKQLGLNRLFLSRITSRFLVNDGT---GKRVNVGIPVKFDAKNEKV 1037
Query: 1021 VGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDI----YLRDDVFPHQG 1076
+G+ R++ K W Y+ +V L++ Y ++FP+ + L++ S +DI + + P Q
Sbjct: 1038 LGYARKN--PKGWEYSNLLVHLLREYKQRFPDFYQALQNISGNDIPNIKKILPKLEPKQA 1095
Query: 1077 EQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVS----LIEHAVDTCEKVEKQITLFVK 1132
+R+ +I W K V ++ +V+ +++H+ + + K + V
Sbjct: 1096 MERLDEIKKWNKFVTENFVIVSLESDSLTKGSIVAVEKYVLQHSSELAQFEMKNLAK-VP 1154
Query: 1133 PNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYD 1192
+ P+ +L L +F+L DRV+ ++D VPL +GT++G +
Sbjct: 1155 REAILNPRVSLGLLR---SQRFRLGDRVIYVQDSGKVPLFSKGTVVGYTT--LGLNLSVQ 1209
Query: 1193 VVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
V+FD G R + RG + + ++N++
Sbjct: 1210 VLFDHELVAGNTFGGRLTTKRGIGLDSSLLLNIT 1243
>gi|22531090|gb|AAM97049.1| unknown protein [Arabidopsis thaliana]
gi|23197934|gb|AAN15494.1| unknown protein [Arabidopsis thaliana]
Length = 763
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 239/653 (36%), Positives = 339/653 (51%), Gaps = 122/653 (18%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGER--- 182
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFRSAK+A + + E
Sbjct: 82 FDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRSAKDASDAAAEEERLREEFER 141
Query: 183 ----LPTE---KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
LP + + FDSN ITPGT FM L L+Y+V L++ D WK++
Sbjct: 142 EGRRLPPKVDSQVFDSNVITPGTEFMGVLSIALQYYVHLRLNHDV---------GWKNIK 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLIMLGL THE +FS+LR
Sbjct: 193 VILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLGLATHEVHFSILR 252
Query: 296 EEV----------------------------KFNTKSNKGGSQIVTPEETKFFLLHLSLM 327
E V + KG + +F LH+ ++
Sbjct: 253 EVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKGDGNDFVKKPYQF--LHIWVL 310
Query: 328 RDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYK 387
R+YLELE ++ P F +E I+DD++ + F +GNDF+P++P L I GA+ LL
Sbjct: 311 REYLELEM-RIPNP---PFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIREGAINLLMA 366
Query: 388 VYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL--------EGK 439
VY++ + DGY+ +G NLKR E+F+ + SF+ + F+++ Q GK
Sbjct: 367 VYKKEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAMQHQRQAERVKRDKAGK 426
Query: 440 MGKKFSDVFHKEKSKEMDPDLAALIKATDDDY-----------DDGTE------------ 476
K+ D ++ + PDL + + + +DG
Sbjct: 427 ATKRMDD-----EAPTVQPDLVPVARFSGSRLASAPTPSPFQSNDGRSAPHQKVRRLSPG 481
Query: 477 -----EVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYY------------------- 512
+++ N E + EE +T E + K+D +
Sbjct: 482 SSVGAAIVDVENSLESDERENKEELKTK-LKELIREKSDAFNSDTTEEDKVKLGQPGWRE 540
Query: 513 -HYKLDYAKVTNE----VLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
+Y+ ++ VT E V +D Y + W +HYY G SW W+YP+HYAP+ SD+K
Sbjct: 541 RYYEEKFSVVTPEEMERVRKDVVLKYTEGLCWVMHYYMEGVCSWQWFYPYHYAPFASDLK 600
Query: 568 DFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDL 627
D +++K+E+G PF PF QLL V PAAS LPE Y+ LMT NSPI+++YP +F D+
Sbjct: 601 DLGEMDIKFELGTPFKPFNQLLGVFPAASSHALPERYRTLMTDPNSPIIDFYPTDFEVDM 660
Query: 628 NGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN-RHGPMLVYTYSN 679
NGK+ W+ + +PFIDE +L++A+ VE LTDEE+ RN R ML S+
Sbjct: 661 NGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLTDEEKRRNSRMCDMLFIATSH 713
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 78/122 (63%), Gaps = 21/122 (17%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP L + +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D T +++FQ +F YI+ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPSP--TTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FR 103
FR
Sbjct: 119 FR 120
>gi|198426685|ref|XP_002129696.1| PREDICTED: similar to 5-3 exoribonuclease 2 [Ciona intestinalis]
Length = 886
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 241/744 (32%), Positives = 367/744 (49%), Gaps = 135/744 (18%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +Y + E + E D + + ++ S PN ND F
Sbjct: 1 MGVPAFFRWLSRKYSSIVIHCNEEKAKEIDGVTIPVD-----TSLPNPNDIEF------- 48
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+ E + K E
Sbjct: 49 ------------------DNLYLDMNGII----------------HPCSHPEDRPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-EVLEQKAK 177
+ FD I F P+++ +MAIDGVAPRAKMNQQR RRFR++KE E E KA
Sbjct: 75 QEIMIAIFDSIDRLFSIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRASKEGVEQTELKAS 134
Query: 178 EKGERL----------PTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
+ E L P +RFDSNCITPGT FM RL LR+++ ++ D
Sbjct: 135 IRAELLRNGMRLPEVDPKAERFDSNCITPGTEFMFRLAACLRFYIIDRLNNDP------- 187
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
W+++ VILS PGEGEHKIMD+IR + +PD++PN HC+ G DADLIMLGL TH
Sbjct: 188 --GWRNIEVILSDANVPGEGEHKIMDFIRKQRGQPDHDPNTHHCICGADADLIMLGLATH 245
Query: 288 EPYFSLLREEVKFNTKSNKG-----GSQIV----TPEE---------------TKFFLLH 323
EP F+++REE K N G G ++ P + T + +
Sbjct: 246 EPNFTIIREEFKPNQPRPCGICAQYGHEMTDCCGLPRDQSDELNVVQSQPHAGTNYIFIR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
+ ++R+Y++LE ++ PG L F + ENIIDDWV+M F +GNDF+P+LP L I GA+
Sbjct: 306 ICVIREYIKLE---MEMPG-LPFKYDFENIIDDWVMMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY-ADIQYLEGKMGK 442
L ++Y++++ GY+ G +NL R EK + + + E FR++ +D+ Y + K
Sbjct: 362 KLVRLYKDIVHQTGGYLTCNGKVNLSRVEKIMMGIGKLEDEIFRKRRESDVNYRAREKAK 421
Query: 443 K-------------------------------FSDV---FHKEKSKEM-DPDLAALIKAT 467
+ ++V + +SK++ + D AA ++A
Sbjct: 422 RQRTKRDQGPSYIPGSQFAPTPLGSGFESPNPLTNVKQSILEMRSKDLKNLDAAASLRAM 481
Query: 468 DDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLR 527
T+ + A ++ D++ + + + + + Y+ K + + E R
Sbjct: 482 LSKSSTSTQAESSAAKRKKEDNDDDEPDDDVRLWEDGWKER--YFRAKFNVSMKDFEFRR 539
Query: 528 DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPFQ 586
CY+ + W L YYY GC SW W++P HYAP+ SD D S L ++ +P P +
Sbjct: 540 TLVRCYVEGLCWVLLYYYQGCASWKWFFPFHYAPFASDFFDISDLPNEFPTNTQPKRPLE 599
Query: 587 QLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEV 646
QL+ V P AS + LP ++ LM SPI+++YPE+F DLNGKK W+ V L+PF+DE
Sbjct: 600 QLMCVFPEASGQFLPTTWRKLMGDPESPIIDFYPEDFKIDLNGKKYAWQGVALLPFVDED 659
Query: 647 KLIKAMDAVEHLLTDEERSRNRHG 670
+++ ++ V LT +E RN G
Sbjct: 660 RMMSSLTRVYDDLTPQEEKRNSRG 683
>gi|401405148|ref|XP_003882024.1| putative 5'-3' exonuclease [Neospora caninum Liverpool]
gi|325116438|emb|CBZ51991.1| putative 5'-3' exonuclease [Neospora caninum Liverpool]
Length = 2070
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 240/737 (32%), Positives = 351/737 (47%), Gaps = 168/737 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+ +F+R++SERYP ++E + + +PEFDNLYLDMNGI+H CSH N +E +
Sbjct: 1 MGIGRFYRWLSERYPLINEKITQASLPEFDNLYLDMNGILHTCSHGNSGG-MLHESEDAM 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+F ++++ + PKK +A DGVAPRAKMNQQR RR+R+AK+A L ++ +E
Sbjct: 60 WVDVFAALDLIISTVNPKKFLVLAADGVAPRAKMNQQRARRYRAAKDAAELARQKEE--H 117
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
RL + QR ++ K
Sbjct: 118 RL--------------------------------LKMQR--------------KQDKSAP 131
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
+ P+ FDSNCI+PGT FM + + LR+F + K+ D WK + V+LSG
Sbjct: 132 QSPPSGGHFDSNCISPGTEFMAKFFRHLRFFCEKKLNEDAR---------WKHLKVVLSG 182
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
+ PGEGEHKIM +IR KS P N+RHCLYGLDADLIML L +HEP+F LLREEV F
Sbjct: 183 PDVPGEGEHKIMQFIRCSKSDPHSGRNVRHCLYGLDADLIMLSLASHEPHFCLLREEVVF 242
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEF------------------------- 335
KG + + LLH+SL+R+YL LEF
Sbjct: 243 GKAVTKGPQDRLLTKRENLQLLHISLLREYLFLEFAAVALRAAPALKSSSNEKEQPSRAD 302
Query: 336 ----------GKLKEPGV---LSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGAL 382
L P + L +P E IIDD+VL F++GNDF+P+ I +G L
Sbjct: 303 GAAPAEIVFDASLGSPSLRPSLLYPRERERIIDDYVLFCFMVGNDFLPHPKATDIADGGL 362
Query: 383 PLLYKVYQEVL----------PTLDG-YINEG-GYLNLKRFEKFLTKLA-SFDFEQFREK 429
LL Y+E L P+ G +++ G G ++ F FL+ + + + +E
Sbjct: 363 DLLMTCYKEYLQGYAVLAEQAPSPAGPWLSTGCGQIDFCNFFLFLSLFVDTVETDLLQEW 422
Query: 430 YADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYY 489
AD Q+++ K ++ + H E P AL+ Y + +Y
Sbjct: 423 AADSQWIQSK--RRNAREAHAESKPP--PSGDALLA------------------YRQAFY 460
Query: 490 SDEDEEWRTNFFSEFGQHK-TDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGC 548
+ G T ++D V Y+ +QW L+YY+ G
Sbjct: 461 -----------LKKMGMDGHTPEGRKQIDRLAVD----------YLEGLQWVLYYYFRGP 499
Query: 549 --VSWSWYYPHHYAPYISD----------IKDFSHLN---LKYEMGEPFLPFQQLLAVLP 593
W W+YPHHYAP+++D +KD + L +++ +P+ PF QLL++LP
Sbjct: 500 HYSGWDWFYPHHYAPFMTDVLCCSFFTEGVKDLADLRRKEIRFPASKPYAPFMQLLSILP 559
Query: 594 AASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMD 653
S LLP+ + ++ + +L Y+P +F D+ G W V L+PFI+E L K
Sbjct: 560 PKSASLLPKALRQILLSPSLELLPYFPTDFEVDMEGCTVPWGGVTLLPFIEEKLLYKEAL 619
Query: 654 AVEHLLTDEERSRNRHG 670
+ LT EE RN G
Sbjct: 620 PLFSKLTGEEARRNTRG 636
>gi|241786594|ref|XP_002414458.1| 5'->3' exoribonuclease, putative [Ixodes scapularis]
gi|215508669|gb|EEC18123.1| 5'->3' exoribonuclease, putative [Ixodes scapularis]
Length = 759
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 248/721 (34%), Positives = 358/721 (49%), Gaps = 112/721 (15%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S++YP + E ++ + + +DM + PN ND F +
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCVEEKVVDGVKVPVDM-------TKPNPNDVEF----DNL 49
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 50 YLDMNG---IIHPCCHP----------------------------------ENKPAPKNE 72
Query: 121 RLPTEKRFDFI--TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE-AEVLEQKAK 177
F++I + P++L +MAIDGVAPRAKMNQQR RRFR++KE AE +E+ ++
Sbjct: 73 DEMMVDIFEYIDRIMSVVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKVEEMSR 132
Query: 178 ------EKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
+KG LP EK FDSNCITPGTPFM RL + L Y+V ++ D
Sbjct: 133 IRTELRDKGIPLPPEKPKSEHFDSNCITPGTPFMARLAKCLHYYVHDRMNNDP------- 185
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
WK++ VILS PGEGEHKIMD+IR ++ P ++PN HCL G DADLIMLGL TH
Sbjct: 186 --GWKNIEVILSDANVPGEGEHKIMDFIRRQRANPKHDPNTHHCLCGADADLIMLGLATH 243
Query: 288 EPYFSLLREEVKFN--------------TKSNKGGSQIVTPE-------ETKFFLLHLSL 326
EP F+++REE K N K +G ++ T E ET+F L L++
Sbjct: 244 EPNFTIIREEFKPNQPRPCELCGQLGHEMKDCQGLAKEKTGELEKPIGCETEFIFLRLNV 303
Query: 327 MRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLY 386
+R+YL + P F F+IE IDDWV M F +GNDF+P+LP L I GA+ L
Sbjct: 304 LREYLTRDLHMDNLP----FTFNIERAIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLI 359
Query: 387 KVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSD 446
+Y++ + GY+ E G++ L+R + ++ F A Q + +
Sbjct: 360 TLYKKAVYKTGGYLTENGFVALERVQLIMSGKCGFSL-----LLAVGQAVGATQNARREA 414
Query: 447 VFHKEKSKEMDPDLAALIKATDDDYDDGTEEV----------LNYANYEEYYYSDEDEEW 496
+ + E +L+ A + + V +E SDE+E
Sbjct: 415 YDMRREGMEHRRNLSTGNLAANGPLESMLRPVSVRSSAPSSPHPSLGHEGDDSSDEEEPH 474
Query: 497 RTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYP 556
E G K YY K D + A Y+ + W L YYY GC SW W++P
Sbjct: 475 DEVRLWEDGW-KERYYVSKFDINSDNVAFRHEVATAYVEGLCWVLRYYYQGCASWKWFFP 533
Query: 557 HHYAPYISDIKDFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPI 615
+HYAP+ SD + + + +E +PF P +QL++V PAASK+ LP + +LM +SPI
Sbjct: 534 YHYAPFASDFINVGDIKINFERDTQPFKPMEQLMSVFPAASKQHLPPAFGDLMDDPDSPI 593
Query: 616 LEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
+++YP +F DLNGKK W+ V L+PF+DE +L++ + V LT++E RN G + Y
Sbjct: 594 IDFYPIDFKIDLNGKKYAWQGVALLPFVDERRLLETVKTVYPTLTEDEVKRNIRGDDVFY 653
Query: 676 T 676
Sbjct: 654 V 654
>gi|391327300|ref|XP_003738141.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Metaseiulus
occidentalis]
Length = 960
Score = 372 bits (955), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 227/623 (36%), Positives = 321/623 (51%), Gaps = 91/623 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEV-------LEQKAKE 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KEA L ++ +
Sbjct: 83 FEYIDRIFSIIRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEAAEKAATISRLRRELQS 142
Query: 179 KGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDV 234
KG LP EK FD+NCITPGTPFM RL + L Y++ ++ D W+++
Sbjct: 143 KGFHLPPEKAPEDHFDTNCITPGTPFMDRLAKCLHYYIHDRLNNDP---------GWQNI 193
Query: 235 CVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLL 294
VILS PGEGEHKIMD+IR ++ P ++PN RHCL G DADLIMLGL THEP F+++
Sbjct: 194 EVILSDANVPGEGEHKIMDFIRKQRASPSHDPNTRHCLCGADADLIMLGLATHEPNFTII 253
Query: 295 REEVKFNT---------------------KSNKGGSQIVTP--EETKFFLLHLSLMRDYL 331
REE K N K ++I P ET+F + L+++++YL
Sbjct: 254 REEFKPNQPRPCELCGQIGHEMKDCMGLPKDIASQTKIEKPLGAETEFIFIRLNVLKEYL 313
Query: 332 ELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQE 391
E P F +SIE IDDWV + F +GNDF+P+LP L I GA+ L ++Y+E
Sbjct: 314 TKELWIEGLP----FKWSIERAIDDWVFLCFFVGNDFLPHLPSLEIREGAIDRLVRIYKE 369
Query: 392 VLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE--GKMGKKFSDVFH 449
+ Y+ + G+ + LTKL + E FR++ D + + K+G+
Sbjct: 370 TIHVKKDYLTKNGFAQMDHCAMILTKLGQAEDEIFRQRQIDEEKFKRRQKVGESRCTPLT 429
Query: 450 KEKSKEMDPDLAALIKATDDDYDD--------------------GTEEVL---------- 479
S +D A + DY D G E +L
Sbjct: 430 LSSSGRIDSVSAWDSRLLTIDYRDEVLSQRRSAMDFSRGLHGGPGIEAMLEPEGGAQGQP 489
Query: 480 --NYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAI 537
A + DE W + K YY K + + + A Y +
Sbjct: 490 AKRKAEDLDEEPEDEVRLWEVGW-------KERYYESKFEVSPENQSFRHEVAAAYAEGL 542
Query: 538 QWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPFQQLLAVLPAAS 596
W LHYYY GC SW W++P+HYAP+ SD + L + +E +PF P +QL++V PAAS
Sbjct: 543 CWVLHYYYQGCASWKWFFPYHYAPFASDFSEIGTLKISFEKNTKPFNPMEQLMSVFPAAS 602
Query: 597 KELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVE 656
++ LPEP+ +LM SPI+++YP +F DLNGKK W V L+PF+DE +L++ + V
Sbjct: 603 RQHLPEPWGDLMEDPESPIIDFYPIDFRIDLNGKKAAWMGVALLPFVDEKRLLETVATVY 662
Query: 657 HLLTDEERSRNRHGPMLVYTYSN 679
LT EE+ RN G ++ N
Sbjct: 663 DRLTPEEKRRNSRGDSYIFIRKN 685
Score = 113 bits (283), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 93/153 (60%), Gaps = 29/153 (18%)
Query: 1 MGVPKFFRYISERYP-----CLSE----------VVREYQIP-----EFDNLYLDMNGII 40
MGVP FFR++S ++P C+ E V + P EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKFPNIIVHCVEERGHTVDGNQRVNIDTSKPNPNNVEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP +N P + E ++ IF YI+ +F +I+P++L +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCCHP-ENKPAPK-NEDEMMVAIFEYIDRIFSIIRPRRLLYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEV-------LEQKAKEKGERLPTEK 126
RFR++KEA L ++ + KG LP EK
Sbjct: 119 RFRASKEAAEKAATISRLRRELQSKGFHLPPEK 151
>gi|403163584|ref|XP_003323653.2| hypothetical protein PGTG_05555 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164365|gb|EFP79234.2| hypothetical protein PGTG_05555 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1452
Score = 372 bits (955), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 244/762 (32%), Positives = 390/762 (51%), Gaps = 47/762 (6%)
Query: 486 EYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYY 545
E+ D D+E F + K+ YYH K++ + L + Y +QW LHYYY
Sbjct: 506 EWNEDDFDQEQEQKFQKALSEWKSQYYHEKMNLDFANPDQLHELTYAYTEGLQWVLHYYY 565
Query: 546 NGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQ 605
+G SWSW+YP+HY+P ISD+ + + + +G+PF PF+QL+ VLP S +P ++
Sbjct: 566 DGVASWSWFYPYHYSPMISDLSNVAPYKFSFNLGKPFKPFEQLMGVLPELSSSHVPPAFR 625
Query: 606 NLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERS 665
+LM SPI++ YP +F TDLNGKK DWEA+V IPFID+ +L+KAM A EH L DEER
Sbjct: 626 DLMVNSESPIIDLYPRQFETDLNGKKHDWEAIVKIPFIDQDRLLKAMKAHEHKLLDEERR 685
Query: 666 RNRHGPMLVYTY---SNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRK 718
RN GP + Y ++V ++L P +FP ++ H+ R +Y P +L K
Sbjct: 686 RNEFGPTWQFRYNPQTSVTYPSSL-PGFFPELHNCHS------RMTVYDLPTIQGLRLIK 738
Query: 719 GLCQDVNL-KLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQ 776
GLCQ V L K V FP+L ++ T + +KV Q S+ E+I++ + + + ++
Sbjct: 739 GLCQGVLLGKDTVAGFPSLHNLPHTGTLLFHGIKVHQSESKGETIVLDIPNVYEGTKIED 798
Query: 777 VADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDA-FQLSKKS 835
+A+ +LG +++NYP L E +V A++ R D +S +D A +Q S
Sbjct: 799 LANTLLGSRVYVNYPFLREAKVTAISDSLFRYELDPHSQRCRSIPHEDRALAQWQRSADG 858
Query: 836 ITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNL 895
I K G+ IG+ +V+V+ +P++ + G + ++ F YA Q+ VL +
Sbjct: 859 IEYELSKKCGMVIGDVDVIVHAKPIKGLQRM--EDGALVKE--FESRDCDYALQTIVLQV 914
Query: 896 QQARESL---EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEP 952
A K+I E F G + F L YG+ G V+ K++ +SF +E
Sbjct: 915 SSADPRFMEQSAKSITEEFPLGSKVFFLGTLLYGAPGQVVGHSKDKLDLRIMSFPTDKEE 974
Query: 953 DLS--DLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLN 1010
+ + + + Y+PS+ + +L I L LS+ T SI +++ K NIGL+
Sbjct: 975 NFAFRSALRAEGGASKPYVPSHVLCRRLGIGGLTLSKITSSIMVLEKPGSDNKT-NIGLS 1033
Query: 1011 IKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDD 1070
+KF K ++V+G T++ E+ W Y+ + V LI+ Y+++FPEV L+ S D+ D
Sbjct: 1034 MKFEAKAQKVLGLTQKSESG--WEYSFEAVKLIEEYLERFPEVPERLESRGS-DLLRAQD 1090
Query: 1071 VFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEH------AVDTCEKVE 1124
FP Q E R+A + W+K + + ++ + E A T EKV+
Sbjct: 1091 FFPEQPEARLAAVKGWIKSKGVRDFDRVGLETDSLERGTIERFEAITSKFLAERTPEKVK 1150
Query: 1125 KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGE 1184
+ I V + P ++L + F+L DRV + D TVP+ +G ++GI +
Sbjct: 1151 QAIIRHVPRRAILKPSHAEEQL---KNQSFELADRVTMVSDRGTVPISAKGVVVGITE-- 1205
Query: 1185 TSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
+ DVVFD PF G + RC RG + ++NL+
Sbjct: 1206 ----KLIDVVFDGPFIGGTTLSNRCEMYRGVSIGPSTILNLT 1243
Score = 336 bits (861), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/304 (52%), Positives = 217/304 (71%), Gaps = 19/304 (6%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+FF+A+DGVAPRAKMNQQR RRF++AKE + L +KA +GE+LP FDSNCITPG
Sbjct: 77 PQKVFFLAVDGVAPRAKMNQQRSRRFKTAKENQELIEKAIRRGEKLPDSTGFDSNCITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
TPFM RL +QL+YF+ K++ D W+ V VI SGH+ PGEGEHKIM+YIR
Sbjct: 137 TPFMARLSEQLKYFINKKVSEDS---------AWQSVQVIFSGHDVPGEGEHKIMEYIRL 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTK--SNKGGSQIVTPE 315
K++ DYNPN+RHC+YGLDADLIMLGL +H+P+F LLREEVKF+ + S+KG E
Sbjct: 188 SKAQEDYNPNIRHCVYGLDADLIMLGLLSHDPHFCLLREEVKFSAQKSSSKG------LE 241
Query: 316 ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
+F+LLH+SL+RDYL+ EF L++ V + +E IIDD++L+ +GNDF+P+LP+L
Sbjct: 242 NQRFYLLHISLVRDYLDWEFASLRK--VKDLEYDLERIIDDFILLCIFVGNDFLPHLPNL 299
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQY 435
HI GAL LL+ +Y+ VLP GY+NE G L+ +R + L +L ++ E F AD +
Sbjct: 300 HINEGALGLLFDIYKRVLPKAGGYLNEFGTLHTERLQLVLNELIVYERENFEHICADSSW 359
Query: 436 LEGK 439
+E K
Sbjct: 360 IESK 363
Score = 180 bits (456), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 104/129 (80%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGV KFFR++SERYP + ++V E +IP+FDNLYLDMNGIIH+CSHPN+ HFRITE+ I
Sbjct: 1 MGVSKFFRWMSERYPFVLQLVEENRIPQFDNLYLDMNGIIHHCSHPNEGSAHFRITEEDI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ IF Y+E LF + +P+K+FF+A+DGVAPRAKMNQQR RRF++AKE + L +KA +GE
Sbjct: 61 YLAIFSYLEHLFALAKPQKVFFLAVDGVAPRAKMNQQRSRRFKTAKENQELIEKAIRRGE 120
Query: 121 RLPTEKRFD 129
+LP FD
Sbjct: 121 KLPDSTGFD 129
>gi|170058238|ref|XP_001864833.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877413|gb|EDS40796.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 884
Score = 371 bits (953), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 256/734 (34%), Positives = 362/734 (49%), Gaps = 122/734 (16%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDN-LYLDMNGIIHNCSHPNDNDPHFRITEK 58
MGVP FFR++S +YP + E V + + N LY DM + PN N F
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECVEQKNTDDDGNVLYDDM-------TKPNPNKVEF----D 49
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
++ D+ I+ P+ D APR E E++ E
Sbjct: 50 NLYLDMNG---IIHPCTHPE-------DKPAPR--------------NEDEMM-VAIFEC 84
Query: 119 GERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-----EV-- 171
+RL + P+++ +MAIDGVAPRAKMNQQR RRFR++KEA E+
Sbjct: 85 IDRL----------MNIVRPRQVLYMAIDGVAPRAKMNQQRSRRFRASKEAAEKATEIAK 134
Query: 172 LEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
+ ++ KG LP EK FDSNCITPGTPFM RL + L+Y+V ++ +
Sbjct: 135 IREELAAKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYVHDRMNNNP------- 187
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
WK + VILS PGEGEHKIMDYIR +++PD++PN H L G DADLIMLGL TH
Sbjct: 188 --GWKGLKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLIMLGLATH 245
Query: 288 EPYFSLLREEVKFN--------------------TKSNKGGSQIVTP--EETKFFLLHLS 325
E +F+++REE N KS + + P +ET+F + L+
Sbjct: 246 ETHFTIIREEFLPNKERPCDICQQMGHEMKDCAGLKSARDCERSPPPPGKETQFIFVRLN 305
Query: 326 LMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLL 385
++++YL E L P L F + E +IDDWV M F +GNDF+P+LP L I A+ L
Sbjct: 306 VLKEYLAKE---LDMPN-LPFTYDFERVIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRL 361
Query: 386 YKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFS 445
+Y++ + GY+ + G + L R E +T L + E FR + + + K+
Sbjct: 362 VTLYKKCVYKTKGYLTDSGDVTLDRVELIMTDLGYAEDEIFRNRKVTEDRFKER-NKRMK 420
Query: 446 DVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLN----YANYEEYYYS----------- 490
+E+ + D + T + ++N AN+ +
Sbjct: 421 MQKEREQRPKFDQMHNSQFAPTPLGRGQTPQAIVNPRQEAANFRMGGNNRNQQDSNQDNQ 480
Query: 491 -----DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYY 545
DE W F K YY K D + + A Y+R + W L YYY
Sbjct: 481 QPETPDEVRLWEDGF-------KDRYYESKFDVLPTNMKFRQTVAWEYVRGLCWVLKYYY 533
Query: 546 NGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQ 605
GC SW WY+P+HYAP+ SD + ++N ++ G PF P QQL+ V PAAS+ +P +
Sbjct: 534 QGCASWEWYFPYHYAPFASDFRTLQNVNKHFDRGTPFKPLQQLMGVFPAASRSHVPPAFA 593
Query: 606 NLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERS 665
LM SPI+++YP +F DLNGKK W+ V L+PF+DE +L KA D LT EER
Sbjct: 594 ELMVDPKSPIIDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRLFKATDPKVPELTQEERL 653
Query: 666 RNRHGPMLVYTYSN 679
RN +G +Y S
Sbjct: 654 RNENGLARLYLCSG 667
>gi|296817211|ref|XP_002848942.1| exonuclease II Exo2 [Arthroderma otae CBS 113480]
gi|238839395|gb|EEQ29057.1| exonuclease II Exo2 [Arthroderma otae CBS 113480]
Length = 1412
Score = 371 bits (953), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/442 (44%), Positives = 261/442 (59%), Gaps = 96/442 (21%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSP--------- 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FRM + K F+AI
Sbjct: 52 ----------AFRMTEDK--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE+ ++KA
Sbjct: 65 -------FNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRARRFRTALDAELAKEKAIR 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G +P E FDSNCITPGT FM +L +QLRYF+ K++ D W+ V V+L
Sbjct: 118 EGVEMPKEDAFDSNCITPGTEFMTKLTKQLRYFINKKVSEDA---------EWQGVEVVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEP-YFSLLREE 297
SGHE PGEGEHKIM+YIR K++P+Y+PNMRHC + LC+ E ++ EE
Sbjct: 169 SGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCF--------TISLCSRESDVWTAEPEE 220
Query: 298 VKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDW 357
+K E F+LLHL ++R+YLELEF +LK G L FPF +E +IDD+
Sbjct: 221 IK-------------ELEHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERVIDDF 267
Query: 358 VLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTK 417
+LM F +GNDF+PNLP+LHI GAL ++KVY+EVLP L GY+NE G +N++R L
Sbjct: 268 ILMAFFVGNDFLPNLPNLHINEGALAWMFKVYKEVLPKLGGYVNEHGKINMERLRTLLAA 327
Query: 418 LASFDFEQFREKYADIQYLEGK 439
L+ +F F +Y+D ++L+ K
Sbjct: 328 LSDVEFRFFEAEYSDARWLKSK 349
Score = 347 bits (890), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 242/747 (32%), Positives = 382/747 (51%), Gaps = 51/747 (6%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K YY K + E +R E Y++ +QW L YYY G SW W+Y +HYAP
Sbjct: 490 KFQEWKDKYYKEKFGWGLENTEEMRKLTENYVQGLQWVLFYYYRGVASWPWFYRYHYAPM 549
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISDI ++++++G+PF PFQQL+ VLP SK+++P Y +LMT SPI+++YP +
Sbjct: 550 ISDIHLGLGADVEFKLGQPFFPFQQLMGVLPDRSKKIVPVAYHSLMTTPESPIIDFYPRD 609
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NVN 681
F D+NGKK +WEAVV IPFIDE +L+KAM EHLLT +E++RN G L +TYS +V
Sbjct: 610 FELDMNGKKMEWEAVVKIPFIDEERLLKAMATKEHLLTPDEKARNTFGVTLKFTYSPDVE 669
Query: 682 -LGTALAPDYFPAINENHAVEK-----PLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFP 734
+ + P FP ++ H +E + D YV GL + V + + FP
Sbjct: 670 FIYPSSLPGIFPDVSRCHCIENVFELPTMEGLDPYV-------GLVEGVKIGAEALAGFP 722
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLI 794
+L+ +Q T ++ V VFQQ SRNES+++ ++ A LG+ + + YP L
Sbjct: 723 SLQTLQQTGQLGFHGVCVFQQESRNESMVVTIVDPEIAGNTTDAKAKLGRRVHVGYPFLQ 782
Query: 795 EIRVQAVATKD-SRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEV 853
E +V V+ + + D V + ++ + I Y +LG+ IG E
Sbjct: 783 EAKVVCVSDELFDYVQVDDEEHVVAIPHTPTQINQWKKKAEKIESYYSKRLGMIIGEVET 842
Query: 854 LVYGQPVESRKYFF-GPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESLEYKT----- 906
+V VE K G ++ T I T YA Q V ++ E L +
Sbjct: 843 IVR---VEMLKGLMKTADGATVKEFTEIPGVETEYAAQLIVDSV--ISEDLRFIERAAVP 897
Query: 907 IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQDDTV 965
I+E F G + F L +YG+ V T E+ L V+ +EP+ + + +
Sbjct: 898 IEEEFPEGARAFFLGEYNYGA--PVHVTGHEDGKLSGLLSAVKGKEPEFGREHVMNAEKL 955
Query: 966 YNYLPSYTVASKLSISPLLLSRFTGSIFI-IDSTEEGAKRHNIGLNIKFSRKNEEVVGFT 1024
Y PS+ +A L +SPL L++ T S + +D T R N+GLN+KF K +V+G++
Sbjct: 956 SKYTPSFAIARNLHLSPLTLAKITSSFSVNVDGT-----RVNLGLNLKFEAKKLKVLGYS 1010
Query: 1025 RRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQI 1083
RR + W ++E+ + L+++YM +FP+ ++ D++ D +P +Q++ +I
Sbjct: 1011 RRGNSG--WEFSERAIGLLQDYMIKFPDFIAGIQRKPQGDLFEPTDFYPADIAKQKIKEI 1068
Query: 1084 VSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE----KQITLFVKPNKLYIP 1139
SWLK E P A +D+ +V IE + D + Q V N L P
Sbjct: 1069 QSWLKSIESKSFERVPLEAEQLDSSIVQAIEKSADELHQTRAAPVAQKIRGVPRNALLKP 1128
Query: 1140 KPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPF 1199
+L + F+L DRV+ +D VP+ RGT++G+ + TS + + DV+FD F
Sbjct: 1129 ADAEHRLN---NQHFQLGDRVIYAQDSGKVPIASRGTVVGLTR--TSRNLLLDVLFDVSF 1183
Query: 1200 PHGVKI--RCSESRGYRMPAQAMINLS 1224
G + RCS RG +P+ +++NL+
Sbjct: 1184 MSGTTLSDRCSPFRGSTVPSSSVLNLT 1210
>gi|255542378|ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 964
Score = 371 bits (952), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 251/716 (35%), Positives = 360/716 (50%), Gaps = 135/716 (18%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIH--NCSHPNDNDPHFRITEK 58
MGVP F+R++++RYP V E + E D NG+I + S PN N F
Sbjct: 1 MGVPAFYRWLADRYPLAIVDVVEEEPKE------DSNGVIGPIDISKPNPNGLEF----D 50
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
++ D+ I F DG P + F+S
Sbjct: 51 NLYLDMNGIIHPCFH-----------PDGKPPPPTYDDV----FKSI------------- 82
Query: 119 GERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEV----- 171
FD+I F P+KL FMAIDGVAPRAKMNQQR RRFR+AK+A
Sbjct: 83 ---------FDYIDHLFTLVRPRKLLFMAIDGVAPRAKMNQQRSRRFRAAKDAAEAEAEE 133
Query: 172 --LEQKAKEKGERL-PTEK--RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTL 226
L ++ + +G+ L P EK DSN ITPGT FM L L+Y+V++++ + WK T
Sbjct: 134 ERLRKEFEAEGKLLSPKEKPETSDSNVITPGTQFMAVLSTGLQYYVQMRLNHNPGWKYT- 192
Query: 227 SLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCT 286
VILS PGEGEHK+M YIR ++ +NPN RHCLYGLDADLIML L T
Sbjct: 193 --------KVILSDANVPGEGEHKVMSYIRLQRNLSGFNPNTRHCLYGLDADLIMLALAT 244
Query: 287 HEPYFSLLREEVKF------------------NTKSNKGGSQI-------VTPEETKFFL 321
HE +FS+LRE V F + + G + + V + K+
Sbjct: 245 HEIHFSILREMVTFPGQQEKCFSCGQTGHLAADCRGKPGDNPLDWNVEDDVPIHKKKYQF 304
Query: 322 LHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGA 381
L++ ++R+YL+ E P ++F E I+DD+V + F +GNDF+P++P L I GA
Sbjct: 305 LNIWVLREYLQYELDVPNPPLEINF----ERILDDFVFLCFFVGNDFLPHMPTLEIREGA 360
Query: 382 LPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMG 441
+ LL VY+ + GY+ + G +NL R E F+ +A ++ + F+++ Q+LE
Sbjct: 361 INLLMHVYRREFSAMGGYLTDAGEVNLDRVEHFIQSVAIYEEQIFQKRTRIQQFLENNEE 420
Query: 442 KKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFF 501
+ +E S+E+ +K L Y+E YY+++
Sbjct: 421 MRLKA--RRESSEEIQTPAVDKVK-------------LGEPGYKERYYAEK--------- 456
Query: 502 SEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAP 561
FG D + KV N+V+ Y+ + W YYY G SW W+YP+HYAP
Sbjct: 457 --FGLTTPD------EIDKVRNDVVLK----YVEGLCWVCRYYYQGVCSWQWFYPYHYAP 504
Query: 562 YISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
+ SD+K + L + + +GEPF PF QL+ LPAAS LPE Y+ LMT +SPI ++P
Sbjct: 505 FASDLKGLADLEITFFLGEPFKPFDQLMGTLPAASSNALPEEYRKLMTDSSSPISRFFPL 564
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
+F D+NGK+ W+ + +PFIDE KL+ +E LT+EER RN L+Y +
Sbjct: 565 DFEIDMNGKRFAWQGIAKLPFIDERKLLAQTKKLESTLTEEERLRNSVMLDLLYVH 620
>gi|224047545|ref|XP_002199834.1| PREDICTED: 5'-3' exoribonuclease 2 [Taeniopygia guttata]
Length = 949
Score = 370 bits (950), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 248/752 (32%), Positives = 356/752 (47%), Gaps = 142/752 (18%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN N+ F
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKAKECNGVKVPID-----TSKPNPNEVEF------- 48
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+ E K K E
Sbjct: 49 ------------------DNLYLDMNGII----------------HPCTHPEDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-EVLEQKAK 177
F++I F ++L +MAID APRAKMNQQR RRFR++KE E E+K K
Sbjct: 75 DEMMVAIFEYIDRIFNIVRQRRLLYMAIDXXAPRAKMNQQRSRRFRASKEGMEAAEEKQK 134
Query: 178 ------EKGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ ++
Sbjct: 135 IRQEILAKGGYLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIADRLNSNP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFN-----TKSNKGGSQI--------------------VTPEETKFFLLH 323
F+++REE K N N+ G ++ + E +F +
Sbjct: 246 LNFTIIREEFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADTLPVSEQEFIFIR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L ++R+YLE E L F F E +DDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LCVLREYLERELTM----ASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKM--- 440
L +Y+ V+ GY+ E G++NL+R + + + + F+++ D + +
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKEK 421
Query: 441 -------------GKKFSDVFHKEKSKE---MDPDLAALIKATDDDYDDGTEEVLNYANY 484
G +FS +S +P AA D + T N +
Sbjct: 422 RKRLKRDQPSFIPGGQFSPQALGNRSSPQAICNPRQAAFEMRMHDRQNSTTSASPNTSLT 481
Query: 485 EEYYYS----------DEDEE---------WRTNFFSEFGQHKTDYYHYKLDYAKVTNEV 525
+ S D D E W T + K YY K D +
Sbjct: 482 PDGSPSLGGGIKRKPEDSDSEPEPEDNIRLWETGW-------KQRYYKNKFDVDASDEKF 534
Query: 526 LRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLP 584
R + Y+ + W L YYY GC SW+WYYP HYAP+ SD + + + +E G +PF P
Sbjct: 535 RRKVVQSYVEGLCWVLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKP 594
Query: 585 FQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFID 644
+QL+ V PAAS LP ++ LMT S I+++YPE+FA DLNGKK W+ V L+PF+D
Sbjct: 595 LEQLMGVFPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVD 654
Query: 645 EVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
E +L A++ V LT EE RN G +++
Sbjct: 655 ERRLRAALEEVYPDLTPEESRRNSLGSDVLFV 686
>gi|407925965|gb|EKG18938.1| Putative 5-3 exonuclease [Macrophomina phaseolina MS6]
Length = 1429
Score = 369 bits (947), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 174/318 (54%), Positives = 229/318 (72%), Gaps = 15/318 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+KLFFMAIDGVAPRAKMNQQR RRFR+A++AE +KA +G +P E FDSNCITPG
Sbjct: 77 PQKLFFMAIDGVAPRAKMNQQRARRFRTARDAEEAREKAIREGVEMPAEPAFDSNCITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL Q L+YF+ K++ D W+ V ++LSGHE PGEGEHKIM+YIR
Sbjct: 137 TEFMARLTQHLKYFINKKVSEDV---------DWQGVEIVLSGHEVPGEGEHKIMEYIRQ 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
KS+P Y+PN+RHCLYGLDADLIMLGL +H+P+F LLREEV F +S K ++ E
Sbjct: 188 AKSQPGYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRQSQKKSKEL---EHQ 244
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F+L+HL ++R+YLELEF +L++PG L FPF +E +IDD++LM F +GNDF+PNLP LHI
Sbjct: 245 NFYLMHLCIVREYLELEFQELEQPGALDFPFDMERVIDDFILMAFFVGNDFLPNLPHLHI 304
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GAL L++ VY++VLP GYINEGG +NL+R L +L+ ++ F + AD + +
Sbjct: 305 NEGALALMFGVYKKVLPKAKGYINEGGVINLERLALLLDELSHVEYRFFESENADASWFK 364
Query: 438 GK-MGKKFSDVFHKEKSK 454
GK MG++ DV + K +
Sbjct: 365 GKQMGRE--DVMERTKKR 380
Score = 360 bits (924), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 259/763 (33%), Positives = 387/763 (50%), Gaps = 43/763 (5%)
Query: 482 ANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNL 541
A E+ + E + + +F K +YY KL++ E LR E Y++ +QW L
Sbjct: 485 AQIEDISPDEAQAEMKKKYDEKFNSWKDNYYKSKLEWGLNDKEELRKMTENYVQGLQWVL 544
Query: 542 HYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLP 601
YYY G SW WYY +HYAP ISD+K+ +L +++G+PF P+QQL+ VLP SK ++P
Sbjct: 545 FYYYRGVASWPWYYGYHYAPMISDVKEGLKADLNFKLGQPFRPYQQLMGVLPDRSKSIVP 604
Query: 602 EPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTD 661
Y LMT + SPI+++YP +F D+NGKK DWEAVV IPFIDE +L+ AM +HLLT
Sbjct: 605 AAYHELMTQKESPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRLLPAMATKDHLLTQ 664
Query: 662 EERSRNRHGPMLVYTYS---NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN---- 714
ER RN G L +TY + ++L P FP + VE +I+ P
Sbjct: 665 GERDRNEFGVTLKFTYQPDLDYVYPSSL-PGIFPDLPHCRCVE------NIFELPTMDGL 717
Query: 715 KLRKGLCQDVNLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPS 773
++ GL V + + + FP+LK + F + V VFQQ SRNES++I + +
Sbjct: 718 EVYIGLVDGVKMGIDALAGFPSLKVLPFHGALAFHGVSVFQQESRNESMVINLLDTEARN 777
Query: 774 LKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSK 833
A + LGK + + YP L E +V V D + + +G V + + K
Sbjct: 778 KVSNAQKKLGKAVHVGYPFLQEAKV--VKVSDELFDYVEENGQVVAIPHGPKEISEWKKK 835
Query: 834 KSITDGYYTK-LGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSA 891
+ + +Y+K L +DIG+ E LV+ + ++ + G ++ I T +A Q+
Sbjct: 836 ATRIETFYSKRLAMDIGDAESLVHVEMLKGLRK--TNEGATVKEYGIIPGQETDFATQTI 893
Query: 892 VLNLQQARESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKV 948
V + + K I+E F G + F L YG V+ + L K
Sbjct: 894 VDEVVSEDQRFLEKAAVPIEEEFPVGSRAFFLGELAYGRPLEVLGHSDGKAESWVLVAK- 952
Query: 949 QQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIG 1008
+E D + Q + NY PSY VA +L ++PL+LSR T S+ S R N+G
Sbjct: 953 GREQDFGKNIVKQAEAQANYRPSYAVARQLQVNPLVLSRVTSSL----SVNSSGLRLNLG 1008
Query: 1009 LNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLR 1068
LN+KF K +V+G++R+ ET W Y+ + V LI YM +FPE F L+ + DIY
Sbjct: 1009 LNLKFEAKKLKVLGYSRKGETG--WEYSPKAVDLITQYMIKFPEFFAVLQSNPKGDIYED 1066
Query: 1069 DDVFPHQ-GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTC----EKV 1123
D +P + +Q++ +I +WLK K E P A +D+ VV IE A D K
Sbjct: 1067 TDFYPAEIAKQKMKEIGAWLKSIESKKFEKVPLEAEQLDSDVVKEIEQAADYWIQHGPKT 1126
Query: 1124 EKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQG 1183
E + V L P ++ +F L DR+V ++D VP+G RGTI+G+ +
Sbjct: 1127 EGRKIKGVPRQALLKPSDAEQQIG---GQRFSLGDRIVYVQDSGRVPIGQRGTIVGMTR- 1182
Query: 1184 ETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
T + DVVFD F G + RCS RG +PA +++NL+
Sbjct: 1183 -TPRTTLLDVVFDTTFMSGTSLGERCSPFRGSTVPATSVLNLT 1224
Score = 177 bits (449), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 103/129 (79%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + + P R++E ++
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHNDSDSPTHRMSEDKM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF+YIE LF I+P+KLFFMAIDGVAPRAKMNQQR RRFR+A++AE +KA +G
Sbjct: 61 FIAIFNYIEHLFGKIKPQKLFFMAIDGVAPRAKMNQQRARRFRTARDAEEAREKAIREGV 120
Query: 121 RLPTEKRFD 129
+P E FD
Sbjct: 121 EMPAEPAFD 129
>gi|328709686|ref|XP_003244039.1| PREDICTED: 5'-3' exoribonuclease 1-like [Acyrthosiphon pisum]
Length = 509
Score = 369 bits (946), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 180/261 (68%), Positives = 207/261 (79%), Gaps = 15/261 (5%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+KLFFMAIDGVAPRAKMNQQRGRRFRSA A ++A +GE LP+E+RFDSNCITPG
Sbjct: 77 PQKLFFMAIDGVAPRAKMNQQRGRRFRSAHTAAEQTKEAISRGETLPSEERFDSNCITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
TPFM RL +L YFV K++ D LW V VILSGH+ PGEGEHKIMDYIRY
Sbjct: 137 TPFMVRLQSELEYFVADKMSNDPLWTK---------VQVILSGHQVPGEGEHKIMDYIRY 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
MKS+P YNP+ RHCLYGLDADLIMLGLCTHEPYFSLLREEVKF K+ K S +ET
Sbjct: 188 MKSRPGYNPHTRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFGRKTKKETSV----DET 243
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
+F+LLHLSLMRDYL LEF +LKE L F + +E+IIDDWVLMGFL+GNDFIP+LPDLHI
Sbjct: 244 QFYLLHLSLMRDYLGLEFQELKE--TLPFEYDLESIIDDWVLMGFLVGNDFIPHLPDLHI 301
Query: 378 INGALPLLYKVYQEVLPTLDG 398
GALP+LY+VY +VLP ++G
Sbjct: 302 SKGALPILYRVYMDVLPKVEG 322
Score = 227 bits (578), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 101/129 (78%), Positives = 118/129 (91%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRY+SERYPCLSE+V++YQIPEFDNLYLDMNGIIHNCSHPND+DPHFRITE+ I
Sbjct: 1 MGVPKFFRYMSERYPCLSELVKDYQIPEFDNLYLDMNGIIHNCSHPNDDDPHFRITEETI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++IFHY+E+LF+MIQP+KLFFMAIDGVAPRAKMNQQRGRRFRSA A ++A +GE
Sbjct: 61 VKNIFHYLEVLFQMIQPQKLFFMAIDGVAPRAKMNQQRGRRFRSAHTAAEQTKEAISRGE 120
Query: 121 RLPTEKRFD 129
LP+E+RFD
Sbjct: 121 TLPSEERFD 129
>gi|298713577|emb|CBJ27105.1| dhm exonuclease [Ectocarpus siliculosus]
Length = 709
Score = 366 bits (940), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 208/541 (38%), Positives = 292/541 (53%), Gaps = 71/541 (13%)
Query: 133 LKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSN 192
K P++L ++A+DG APRAKMNQQR RRFRS+KEAEV + + +LP RFDSN
Sbjct: 204 FKLVRPRRLLYLAVDGTAPRAKMNQQRSRRFRSSKEAEVNMAEMVMRDGKLPEVTRFDSN 263
Query: 193 CITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIM 252
CITPGT FM +L + + +++ K+ TD W+ ++ V+ SG + PGEGEHK+M
Sbjct: 264 CITPGTDFMFKLTKAFQAWIEYKMDTDPFWQ--------QNARVVFSGPDVPGEGEHKVM 315
Query: 253 DYIRYMK-SKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQI 311
DYIR + ++PD+ ++RHCLYGLDADLIML L THE +FSLLRE++ K
Sbjct: 316 DYIREARETEPDWRDDLRHCLYGLDADLIMLSLVTHEKHFSLLREKMSVRHSRRKKPKDP 375
Query: 312 VTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPN 371
+T F L+ +SL+R+ L L+F L F F +E +IDD+V M L+GNDF+PN
Sbjct: 376 ITYTRNDFELMEVSLLREMLRLQFQSQANDPKLPFKFELERVIDDFVFMCILVGNDFLPN 435
Query: 372 LPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYA 431
+P L I +GAL + +Y+ +LP + GY+ + ++ R E F+ +++ + FR +
Sbjct: 436 VPHLDISDGALNHMMNMYKLLLPKMGGYLTKKDQIHHGRLEMFMHEVSRREAMYFRRRGV 495
Query: 432 DIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSD 491
+ L + K++D ++K K ++DP+ +A Y +G VL
Sbjct: 496 EESDLVLQDPGKYTDRYYKTKL-DLDPEQEEEKRAVVKHYLEGLYWVLK----------- 543
Query: 492 EDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSW 551
YYH +D SW
Sbjct: 544 -------------------YYHVGVDAGG-----------------------------SW 555
Query: 552 SWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLE 611
SWYYPH YAP S +K+ +++ +E G PF QLL+VLP S + LPEPY+ LM
Sbjct: 556 SWYYPHLYAPLASSMKNLMDIDISFEKGRPFPNLLQLLSVLPPQSADFLPEPYKALMVEP 615
Query: 612 NSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHL--LTDEERSRNRH 669
SPILEYYP EF D NGK WE VV IPFIDE + A+ V+H L +R RN
Sbjct: 616 TSPILEYYPTEFECDANGKTASWETVVKIPFIDEKDVFGALSNVDHTKDLEAVDRLRNYT 675
Query: 670 G 670
G
Sbjct: 676 G 676
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 95/133 (71%), Gaps = 6/133 (4%)
Query: 1 MGVPKFFRYISERYPCLSEVV----REYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRIT 56
MG+PK FR+++++YP +S+ + E+ P DNLYLDMNG+IH C+H ND D +
Sbjct: 131 MGIPKLFRWLTDQYPVISQRLDQGLNEHTAP-IDNLYLDMNGVIHMCTHHND-DEFIELN 188
Query: 57 EKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 116
EK++F+ IF + + +F++++P++L ++A+DG APRAKMNQQR RRFRS+KEAEV +
Sbjct: 189 EKEMFRRIFIFTDRMFKLVRPRRLLYLAVDGTAPRAKMNQQRSRRFRSSKEAEVNMAEMV 248
Query: 117 EKGERLPTEKRFD 129
+ +LP RFD
Sbjct: 249 MRDGKLPEVTRFD 261
>gi|406702486|gb|EKD05502.1| hypothetical protein A1Q2_00263 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1568
Score = 366 bits (939), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 174/330 (52%), Positives = 234/330 (70%), Gaps = 22/330 (6%)
Query: 130 FITLKFCF----PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT 185
F + F F P+K+FFMAIDGVAPRAKMNQQR RRFR+A++A ++A KGE LP
Sbjct: 6 FAYIDFLFTKIKPRKVFFMAIDGVAPRAKMNQQRSRRFRTARDAREKREEALRKGETLPE 65
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPG 245
EK FDSNCITPGTPFM RL + L+Y+V+ +I+ D W+ V VILSGHE PG
Sbjct: 66 EKAFDSNCITPGTPFMARLSEHLKYYVRKRISEDA---------EWRGVKVILSGHEVPG 116
Query: 246 EGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN 305
EGEHKIMD+IR K++P YNPN RHCLYGLDADL+MLGL +H+P+FSLLREEV F K+
Sbjct: 117 EGEHKIMDFIRKTKAQPGYNPNTRHCLYGLDADLVMLGLISHDPHFSLLREEVTFGRKAK 176
Query: 306 KGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIG 365
K V+ + FLLHLSL+R+YL++EF + E +SF + +E IIDDW+LMGF +G
Sbjct: 177 KN----VSLANSNMFLLHLSLLREYLDMEFQSVAES--ISFEYDLERIIDDWILMGFFVG 230
Query: 366 NDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQ 425
NDF+P+LP LHI GAL ++K+Y+E+LP GY+N+ G ++L R + L KL+ ++ ++
Sbjct: 231 NDFLPHLPGLHINEGALETIWKIYKEILPQAGGYLNDKGTISLPRLQLLLDKLSEYEKQR 290
Query: 426 FREKYADIQYLEGKMGKKFSDVFHKEKSKE 455
F E+Y D + +G K+ + + EK+K+
Sbjct: 291 FEEEYMDANWFKGSREKEIAAL---EKAKK 317
Score = 295 bits (754), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 215/719 (29%), Positives = 360/719 (50%), Gaps = 49/719 (6%)
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVL 592
YI +QW L+YYY G +W W+Y +HYAP ISD+KD + +++G+PFLPFQQL+ VL
Sbjct: 497 YIEGLQWILYYYYKGVPAWGWFYNYHYAPMISDLKDIASFKFDFDIGKPFLPFQQLMGVL 556
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAM 652
PA S+E +P+ Y++LM + SPI+++YP+ F D+NGKKQDWEAVV IPFI+E +L++ M
Sbjct: 557 PADSQEHVPQAYRDLMYEDTSPIIDFYPKIFDLDMNGKKQDWEAVVKIPFINEDRLLRTM 616
Query: 653 DAVEHLLTDEERSRNR-HGPMLVYTYSNVNLGT--ALAPDYFPAINENHAVEKPLYRDDI 709
E LT EE+ RNR P +T+ + L + P +FP + +P I
Sbjct: 617 AQREQRLTPEEKGRNRVDTPATQFTHDDTQLTNYPSSLPGFFPDLVACQCKAEPFTLPAI 676
Query: 710 YVHPNKLRKGLCQDVNLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQD 767
+ L GL + V L + FP++ + + V VFQ S+N+S+++ ++
Sbjct: 677 GDGVD-LINGLLEGVRLGGELLAGFPSMDTLPHQGSLGYHHVNVFQTDSKNQSMVVTMRV 735
Query: 768 KVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQD 827
K S ++A ++LG+ F ++P+L E + AV+ + + SG +K D
Sbjct: 736 KPDTDSTAEIAKKLLGQKTFHSWPYLHEGIIAAVSDDSCKYHL-QASGRKMNIVSKH-HD 793
Query: 828 AFQLSK-----KSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
F K I Y + GV G+ +V+++ +P++ K+ G +
Sbjct: 794 GFGAVKWRKEADKIEHHYSKRYGVITGSVDVVLHIRPLKGLKHL--DTGAFVKDYEGADK 851
Query: 883 TVTYAYQSAVLNLQQARESLEYKT-----IDEIFYPGCQCFALSNPHYGSGGCVISTVKE 937
+ A Q AV + A E Y I E F G + L YG VI T ++
Sbjct: 852 EILQARQMAVDRI--AVEDERYTEQPAPPIAEEFPKGTKVIFLGAMAYGVAAQVIDTTED 909
Query: 938 ENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDS 997
+ F +Q ++ + +Y PS+ +A +L IS L LSR T ++ +
Sbjct: 910 ALNIEIAFFPNEQRENVQFTSIVLQRPSSHYYPSHVLARRLGISSLALSRITSTLMV--- 966
Query: 998 TEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFL 1057
+ G ++ NIGL +KF K +V+G++R+++ + W ++E+ ++K Y + FPE F L
Sbjct: 967 SLNGNQKTNIGLALKFESKGLKVLGYSRKND--RGWEFSEKTFDILKRYKEAFPEPFRHL 1024
Query: 1058 KDHSSDDIYLRDDVFPHQGE--QRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEH 1115
D+ S D+ ++ P + V + WLK + + + ++ + V I+H
Sbjct: 1025 -DNRSGDMVTAQELAPSAENPIEVVRAMHKWLKTEGLTDLDPVSLFSEQLEKEAVQQIQH 1083
Query: 1116 AVD------TCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRD--CY 1167
D + E +++ + + ++ P+ + +L +F L DRV +D
Sbjct: 1084 VEDLFRQQKSRETIKRALVKGIPRQAVFKPEHSQYRLQ---GQQFCLGDRVTMAQDRAAG 1140
Query: 1168 TVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
VPL +G ++GI + DVV+D PF G + RC+E RG +P A++NL+
Sbjct: 1141 GVPLAMKGVVVGINTRDI------DVVWDVPFMGGETLGGRCAEYRGSTVPFTAVLNLT 1193
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 52/66 (78%)
Query: 64 IFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLP 123
IF YI+ LF I+P+K+FFMAIDGVAPRAKMNQQR RRFR+A++A ++A KGE LP
Sbjct: 5 IFAYIDFLFTKIKPRKVFFMAIDGVAPRAKMNQQRSRRFRTARDAREKREEALRKGETLP 64
Query: 124 TEKRFD 129
EK FD
Sbjct: 65 EEKAFD 70
>gi|401883118|gb|EJT47352.1| hypothetical protein A1Q1_03823 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1499
Score = 365 bits (938), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 174/330 (52%), Positives = 234/330 (70%), Gaps = 22/330 (6%)
Query: 130 FITLKFCF----PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT 185
F + F F P+K+FFMAIDGVAPRAKMNQQR RRFR+A++A ++A KGE LP
Sbjct: 6 FAYIDFLFTKIKPRKVFFMAIDGVAPRAKMNQQRSRRFRTARDAREKREEALRKGETLPE 65
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPG 245
EK FDSNCITPGTPFM RL + L+Y+V+ +I+ D W+ V VILSGHE PG
Sbjct: 66 EKAFDSNCITPGTPFMARLSEHLKYYVRKRISEDA---------EWRGVKVILSGHEVPG 116
Query: 246 EGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN 305
EGEHKIMD+IR K++P YNPN RHCLYGLDADL+MLGL +H+P+FSLLREEV F K+
Sbjct: 117 EGEHKIMDFIRKTKAQPGYNPNTRHCLYGLDADLVMLGLISHDPHFSLLREEVTFGRKAK 176
Query: 306 KGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIG 365
K V+ + FLLHLSL+R+YL++EF + E +SF + +E IIDDW+LMGF +G
Sbjct: 177 KN----VSLANSNMFLLHLSLLREYLDMEFQSVAES--ISFEYDLERIIDDWILMGFFVG 230
Query: 366 NDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQ 425
NDF+P+LP LHI GAL ++K+Y+E+LP GY+N+ G ++L R + L KL+ ++ ++
Sbjct: 231 NDFLPHLPGLHINEGALETIWKIYKEILPQAGGYLNDKGTISLPRLQLLLDKLSEYEKQR 290
Query: 426 FREKYADIQYLEGKMGKKFSDVFHKEKSKE 455
F E+Y D + +G K+ + + EK+K+
Sbjct: 291 FEEEYMDANWFKGSREKEIAAL---EKAKK 317
Score = 294 bits (753), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 215/719 (29%), Positives = 360/719 (50%), Gaps = 49/719 (6%)
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVL 592
YI +QW L+YYY G +W W+Y +HYAP ISD+KD + +++G+PFLPFQQL+ VL
Sbjct: 497 YIEGLQWILYYYYKGVPAWGWFYNYHYAPMISDLKDIASFKFDFDIGKPFLPFQQLMGVL 556
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAM 652
PA S+E +P+ Y++LM + SPI+++YP+ F D+NGKKQDWEAVV IPFI+E +L++ M
Sbjct: 557 PADSQEHVPQAYRDLMYEDTSPIIDFYPKIFDLDMNGKKQDWEAVVKIPFINEDRLLRTM 616
Query: 653 DAVEHLLTDEERSRNR-HGPMLVYTYSNVNLGT--ALAPDYFPAINENHAVEKPLYRDDI 709
E LT EE+ RNR P +T+ + L + P +FP + +P I
Sbjct: 617 AQREQRLTPEEKGRNRVDTPATQFTHDDTQLTNYPSSLPGFFPDLVACQCKAEPFTLPAI 676
Query: 710 YVHPNKLRKGLCQDVNLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQD 767
+ L GL + V L + FP++ + + V VFQ S+N+S+++ ++
Sbjct: 677 GDGVD-LINGLLEGVRLGGELLAGFPSMDTLPHQGSLGYHHVNVFQTDSKNQSMVVTMRV 735
Query: 768 KVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQD 827
K S ++A ++LG+ F ++P+L E + AV+ + + SG +K D
Sbjct: 736 KPDTDSTAEIAKKLLGQKTFHSWPYLHEGIIAAVSDDSCKYHL-QASGRKMNIVSKH-HD 793
Query: 828 AFQLSK-----KSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
F K I Y + GV G+ +V+++ +P++ K+ G +
Sbjct: 794 GFGAVKWRKEADKIEHHYSKRYGVITGSVDVVLHIRPLKGLKHL--DTGAFVKDYEGADK 851
Query: 883 TVTYAYQSAVLNLQQARESLEYKT-----IDEIFYPGCQCFALSNPHYGSGGCVISTVKE 937
+ A Q AV + A E Y I E F G + L YG VI T ++
Sbjct: 852 EILQARQMAVDRI--AVEDERYTEQPAPPIAEEFPKGTKVIFLGAMAYGVAAQVIDTTED 909
Query: 938 ENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDS 997
+ F +Q ++ + +Y PS+ +A +L IS L LSR T ++ +
Sbjct: 910 ALNIEIAFFPNEQRENVQFTSIVLQRPSSHYYPSHVLARRLGISSLALSRITSTLMV--- 966
Query: 998 TEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFL 1057
+ G ++ NIGL +KF K +V+G++R+++ + W ++E+ ++K Y + FPE F L
Sbjct: 967 SLNGNQKTNIGLALKFESKGLKVLGYSRKND--RGWEFSEKTFDILKRYKEAFPEPFRHL 1024
Query: 1058 KDHSSDDIYLRDDVFPHQGE--QRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEH 1115
D+ S D+ ++ P + V + WLK + + + ++ + V I+H
Sbjct: 1025 -DNRSGDMVTAQELAPSAENPIEVVRAMHKWLKTEGLTDLDPVSLFSEQLEKEAVQQIQH 1083
Query: 1116 AVD------TCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRD--CY 1167
D + E +++ + + ++ P+ + +L +F L DRV +D
Sbjct: 1084 VEDLFRQQKSRETIKRALVKGIPRQAVFKPEHSQYRL---QGQQFCLGDRVTMAQDRAAG 1140
Query: 1168 TVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
VPL +G ++GI + DVV+D PF G + RC+E RG +P A++NL+
Sbjct: 1141 GVPLAMKGVVVGINTRDI------DVVWDVPFMGGETLGGRCAEYRGSTVPFTAVLNLT 1193
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 52/66 (78%)
Query: 64 IFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLP 123
IF YI+ LF I+P+K+FFMAIDGVAPRAKMNQQR RRFR+A++A ++A KGE LP
Sbjct: 5 IFAYIDFLFTKIKPRKVFFMAIDGVAPRAKMNQQRSRRFRTARDAREKREEALRKGETLP 64
Query: 124 TEKRFD 129
EK FD
Sbjct: 65 EEKAFD 70
>gi|322696208|gb|EFY88004.1| exonuclease [Metarhizium acridum CQMa 102]
Length = 1386
Score = 365 bits (937), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 170/307 (55%), Positives = 221/307 (71%), Gaps = 14/307 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE +KA ++G +P E+ FDSNCITPG
Sbjct: 43 PKQLFFMAIDGVAPRAKMNQQRARRFRTALDAEKAREKAIKEGVEMPKEEPFDSNCITPG 102
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILSGHETPGEGEHKIMDYIR 256
T FM +L QQLRYFV K++ D W+ C ++LSGHE PGEGEHKIM+YIR
Sbjct: 103 TEFMAKLSQQLRYFVNKKVSEDADWQG----------CEIVLSGHEVPGEGEHKIMEYIR 152
Query: 257 YMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEE 316
K++P+YNPN+RHCLYGLDADLIMLGL +H+P+F LLREEV F S ++ E
Sbjct: 153 NAKAQPNYNPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRASKTKSKEL---EH 209
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F+LLHL ++R+YLE+EF +L + G LSFPF +E +IDD++LM F +GNDF+PNLP LH
Sbjct: 210 QNFYLLHLCIVREYLEMEFQELHQEGTLSFPFDLERVIDDFILMAFFVGNDFLPNLPGLH 269
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL 436
I GAL ++K+Y+ VLPT DGYINE G +N+ R +K LT+L+ + F +D ++
Sbjct: 270 INEGALANMFKIYKAVLPTCDGYINENGVINMARLDKLLTELSKLELVSFENDISDEKWF 329
Query: 437 EGKMGKK 443
K +K
Sbjct: 330 ASKQMEK 336
Score = 306 bits (784), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 245/783 (31%), Positives = 393/783 (50%), Gaps = 45/783 (5%)
Query: 490 SDEDEEWRTNFFSE-FGQHKTDYYHYKL---DYAKVTNEVLRDQAECYIRAIQWNLHYYY 545
S+E ++ ++E + KT YY K D K E + D + Y++ +QW L YYY
Sbjct: 461 SEEAQQQYEKLYNEKYAGWKTKYYLQKFPEWDPEKYEKEQI-DLCQNYVQGLQWVLFYYY 519
Query: 546 NGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQ 605
G SW W+Y +HYAP ISD+ + +L ++ G+PF P++QL+ VLP SK+++P+ Y
Sbjct: 520 KGIASWPWFYGYHYAPLISDVAKGLNADLNFKKGQPFKPYEQLMGVLPDRSKKIVPKVYH 579
Query: 606 NLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERS 665
+LMT NSPI+++YP +F D+NGKK DWEAVV IPFI+E +L+ AM LL D+E+S
Sbjct: 580 DLMTNPNSPIIDFYPRDFELDMNGKKMDWEAVVKIPFIEEKRLLDAMATKNDLLEDDEKS 639
Query: 666 RNRHGPMLVYTYS-NVNLG-TALAPDYFPAINENHAVEKPLYRDDI----YVHPNKLRKG 719
RN G + +TYS +VN + P FP I +E D+ YV G
Sbjct: 640 RNGFGVPIKFTYSADVNFTYPSPLPGIFPEIQNCRCIENIFDLPDMEGLEYV------SG 693
Query: 720 LCQDVNLKL-YVTHFPTLKHVQFTHKI-ENAKVKVFQQPSRNESIII-VQDKVQVPSLKQ 776
L +K+ + FPTL + +T +I E+ + VFQQ SRN SI++ + D Q S++
Sbjct: 694 LATGALVKVEALAGFPTLHTLPYTAQIVESYGINVFQQDSRNPSIVVTLTDTNQRTSIEA 753
Query: 777 VADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKS- 835
+ LG+ ++ YP L E ++ V + +N V + + ++A SK++
Sbjct: 754 FKAK-LGQRCYVGYPFLQEAKIMKVQDELFSYELAENGQDVVVKDHSN-REASDFSKEAD 811
Query: 836 -ITDGYYTKLGVDIGNTEVLVYGQPVES-RKYFFGPRGKVTQQRTFIRSTVTYAYQSAVL 893
+ + +LGV IG E LV+ ++ K G K + +RS YA Q+ V
Sbjct: 812 YLESWHAKRLGVIIGQVECLVHVHMLKGLLKTEEGALIKEYAENPSVRS--VYASQTIVD 869
Query: 894 NLQQARESL---EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQ 950
+ E E I+E G + F L YG V VK + + +S +
Sbjct: 870 EVVNEDERFIEKEALPIEEELPLGTRAFFLGEYAYGRPLEVTGHVKGKTEVV-VSIPRSK 928
Query: 951 EPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLN 1010
EP+ S + Q + Y PS+ VA +L + PL+LS+ T S + + + N+GLN
Sbjct: 929 EPEFSKRIIHQAERTNPYTPSFAVAKQLGVHPLVLSKITSSYQV---STAAGLKLNLGLN 985
Query: 1011 IKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDD 1070
+KF + +V+G++R+ T W ++ + LI +YM FP+ F ++ D
Sbjct: 986 LKFEARKLKVLGYSRKAHTG--WEFSSLAIKLIADYMVAFPDFFAAIQKEPQRSEICETD 1043
Query: 1071 VF--PHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQIT 1128
++ P QRV +V+WLK+Q +K E P A +D++VV+ + +A + + + I
Sbjct: 1044 LWNDPAVASQRVKDVVAWLKKQETSKFERVPLEAEQLDSEVVTALANAGEQVFQASQDID 1103
Query: 1129 L--FVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETS 1186
+ + I KP+ +L + KF L DRV VP+ RGT+ GI + T+
Sbjct: 1104 IKKLKGVPRAAILKPSDAELVLG-NQKFSLGDRVTFAASAGKVPIATRGTVAGISRTATA 1162
Query: 1187 YDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPHVKNINVMQ 1244
+ DVV+D F G + R RG +P+ +++N + + + +S K
Sbjct: 1163 L--LLDVVWDTSFMSGTTLGERAPMFRGQTVPSSSVLNTADKQVISASSKSQQKRATSTI 1220
Query: 1245 SRG 1247
S G
Sbjct: 1221 STG 1223
>gi|147793034|emb|CAN59715.1| hypothetical protein VITISV_006076 [Vitis vinifera]
Length = 1102
Score = 365 bits (936), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 231/676 (34%), Positives = 329/676 (48%), Gaps = 125/676 (18%)
Query: 6 FFRYISERYPCLS--------EVVREYQIP-----------EFDNLYLDMNGIIHNCSHP 46
F+R++++RYP VV + EFDNLYLDMNGIIH C HP
Sbjct: 137 FYRWLADRYPLAVVNAVEDRPAVVNGVSVAVDTTRPNPNGNEFDNLYLDMNGIIHPCFHP 196
Query: 47 NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 106
+ P + T +F+ +F YI+ +F +++P+KL +MAIDGVAPRAKMNQQR RRFR+AK
Sbjct: 197 -EGLPAPK-TYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRFRAAK 254
Query: 107 EAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 166
EA + TE+ LK F ++ +A+
Sbjct: 255 EAA---------DDASGTER------LKTVFESEMEMLAL-------------------- 279
Query: 167 KEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTL 226
L K+ DSN ITPGT FM L L+Y++ L++ D
Sbjct: 280 ----------------LDQTKKLDSNVITPGTEFMALLSSALKYYIHLRMNLDP------ 317
Query: 227 SLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCT 286
W+ + VILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLIML L T
Sbjct: 318 ---GWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALAT 374
Query: 287 HEPYFSLLREEVKFNTKSNK----------------------GGSQIVT-PEETKFFLLH 323
HE +FS+LRE+V + +K GG I KF L+
Sbjct: 375 HEIHFSILREDVHKAYRKDKNNKPRKDSLLVNKRGXSKQGEVGGEDIEDFISRQKFQFLN 434
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
+ +RDYL + S +E +IDD+V M +GNDF+P++P L I GA+
Sbjct: 435 IWTLRDYLAHDMSIPDR----SLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEISEGAID 490
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKK 443
LL VY++ + GY+ + L+R E+F+ + S + FR++ ++ K G +
Sbjct: 491 LLMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKR----SQVQKKRGVR 546
Query: 444 FSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSE 503
F +K+ + + E + ++ W+ F+ E
Sbjct: 547 FQGSSNKKTVSDYSTTPCVEPQGMTGSSGSSLEPRKTPFCQDSKNIKLGEDGWKERFYVE 606
Query: 504 FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYI 563
+ KT+ V R YI I W +HYYY G SW W+YP+HYAP+
Sbjct: 607 KFEAKTE---------DDRERVRRHAVLKYIEGICWVMHYYYQGVCSWQWFYPYHYAPFA 657
Query: 564 SDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAA----SKELLPEPYQNLMTLENSPILEYY 619
SDI L++++ +G+PF PF QL+ VLPAA S LP Y+ LM E SPIL++Y
Sbjct: 658 SDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAARCTYSAHALPLYYRKLMMDETSPILDFY 717
Query: 620 PEEFATDLNGKKQDWE 635
P +F D+NGK+ W+
Sbjct: 718 PADFELDMNGKRYPWQ 733
>gi|224123990|ref|XP_002319214.1| predicted protein [Populus trichocarpa]
gi|222857590|gb|EEE95137.1| predicted protein [Populus trichocarpa]
Length = 692
Score = 365 bits (936), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 242/688 (35%), Positives = 348/688 (50%), Gaps = 117/688 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGII--HNCSHPNDNDPHFRITEK 58
MG+P F+R+++E+YP ++ V E + P L +NG+ + S PN N F
Sbjct: 1 MGIPAFYRWLTEKYPLITADVME-ETP------LLINGVSVPLDTSCPNPNGIEF----D 49
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
++ D+ I F P +G+ P + F+
Sbjct: 50 NLYLDMNGIIHPCF---HP--------EGLPPPTTYEEVFAAVFKY-------------- 84
Query: 119 GERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
++ F I P+KL FMAIDGVAPRAKMNQQR RRFR+A++A +
Sbjct: 85 -----IDRIFSIIR-----PRKLLFMAIDGVAPRAKMNQQRSRRFRAARDAADQALSIET 134
Query: 179 KGERLPTE--------KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWV 230
G +P K+ DSN ITPGT FM L L Y+++L++ D
Sbjct: 135 DGGIVPESEEGNLEQVKKLDSNVITPGTEFMDLLSSALHYYIRLRMKEDL---------G 185
Query: 231 WKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPY 290
W+ + VILS GEGEHKIM YIR ++ P ++PN RHCLYGLDADLIML L +HE +
Sbjct: 186 WRGIKVILSDANVAGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALASHEIH 245
Query: 291 FSLLREEVKFNTKSNKGGSQIVTPEE----TKFFLLHLSLMRDYLELEFGKLKEPGVLSF 346
FS+LRE K N S++ G E KF L++ ++R+YL + L+ P +
Sbjct: 246 FSILRERRKLNGDSDQVGKFAENIENHISGMKFQFLNVWILREYLAYD---LRIPDT-TL 301
Query: 347 PFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYL 406
+E +IDD+V M +GNDF+P++P L I GA+ LL VY++ + GY+ +
Sbjct: 302 KVDLERVIDDFVFMCLFVGNDFLPHIPSLEISEGAIDLLMTVYKKEFAQMGGYLTNSFEI 361
Query: 407 NLKRFEKFLTKLASFDFEQFREK----YADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAA 462
NL R E F+ L S + FR + D++ ++ K+ FH KS
Sbjct: 362 NLIRVEHFVQALGSHESAIFRRRNQVSLNDLEIRFQRISKR-QQAFHSSKSL-------- 412
Query: 463 LIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVT 522
+DDG + DE W+ +++E + K++
Sbjct: 413 --------FDDGIKL--------------GDEGWKERYYAEKFEAKSE---------DER 441
Query: 523 NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPF 582
+ + R Y+ I W + YYY G SW W+YP+HYAP+ SD L + + +GEPF
Sbjct: 442 DTIRRHAVFKYVEGICWVMRYYYEGVCSWQWFYPYHYAPFASDFYGCDQLEIHFTLGEPF 501
Query: 583 LPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPF 642
PF QL+AVLPAAS LP Y+ LM +SPIL++YP +F D NGK+ W+A+ +PF
Sbjct: 502 KPFDQLMAVLPAASAHALPLFYRKLMIDASSPILDFYPTDFELDNNGKRFSWQAICKLPF 561
Query: 643 IDEVKLIKAMDAVEHLLTDEERSRNRHG 670
I+E +L+ + VEH LTDEER RNR G
Sbjct: 562 IEESRLVSEITKVEHTLTDEERRRNRLG 589
>gi|154413474|ref|XP_001579767.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121913977|gb|EAY18781.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 710
Score = 364 bits (935), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 234/694 (33%), Positives = 343/694 (49%), Gaps = 119/694 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIP--------------EFDNLYLDMNGIIHNCSHP 46
MGVP FFR++ +YP + V E + EFDNLY+DMNG+IH+C HP
Sbjct: 1 MGVPSFFRWLQRKYPLVVSRVLESDVDVDPLESNPNTIGSQEFDNLYIDMNGLIHSCFHP 60
Query: 47 NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 106
D + I E ++++I Y++ +F +++P+KL ++AIDGVAPRAKMNQQR RRFR+AK
Sbjct: 61 ADREQPKNIEE--VYENIKLYLKRIFNIVRPRKLLYLAIDGVAPRAKMNQQRSRRFRAAK 118
Query: 107 EAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 166
++E K + + ITL
Sbjct: 119 DSEYNRNKNFQ-----------ELITLG-------------------------------- 135
Query: 167 KEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTL 226
+QK EK + + DSN ITPGT FMC L Q LR F+ T
Sbjct: 136 ------KQKEAEKIMKEQYIQDHDSNIITPGTKFMCDLSQILRSFISEMQNTSP------ 183
Query: 227 SLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCT 286
W ++ +ILS PGEGEHKIM++IR + YNPN RH +YGLDADLI L L +
Sbjct: 184 ---AWSNIAIILSDASVPGEGEHKIMEFIRIQRLTDGYNPNTRHVMYGLDADLIFLALAS 240
Query: 287 HEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSF 346
HE YFS+LRE + F+ K N + + P + F ++ ++R YL+ E + F
Sbjct: 241 HEVYFSILRENI-FDKKEN---DKPIGP--SSFIFANIFVLRQYLDRELQI-----DVKF 289
Query: 347 PFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYL 406
+ +E +IDD V + F GNDF+P +P I G + L++ Y+++LP L YI G +
Sbjct: 290 GWDLERVIDDIVFLCFAAGNDFLPQIPGFEIPRGFVDQLFERYKKLLPQLSSYITNTGDV 349
Query: 407 NLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKA 466
+K F+ FD YLE + V E+S + + L
Sbjct: 350 EMKNLLPFML---GFD------------YLEPESVHNI--VSPSERSISVSEYVNNLCND 392
Query: 467 TDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVL 526
+Y ++ L A +++ N + + ++Y+ + E +
Sbjct: 393 VKTEYKPENDKKLVTAKFQK----------NQNNLEIYDTKRDKKFYYQSKFGFEDEENI 442
Query: 527 RDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNL----KYEMGEPF 582
++ Y + ++W L YY G SWSW+YP+H AP +S DF L+ ++ +G PF
Sbjct: 443 KNVVHEYCKGMEWVLKYYTKGVASWSWFYPYHSAPLVS---DFVLLDCDVKNEFVLGHPF 499
Query: 583 LPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPF 642
P QQL+AVLP S LP+ +LM ++SPIL++YP++F DL G W+ VLIPF
Sbjct: 500 TPLQQLMAVLPPQSSWCLPKMMCDLMNSDDSPILDFYPKKFKVDLEGGTTAWKGHVLIPF 559
Query: 643 IDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
ID KL K + V L +EE+ RN G +Y
Sbjct: 560 IDAHKLKKCLRNVNDSLNEEEKQRNSFGVTFLYN 593
>gi|183235666|ref|XP_657072.2| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|169800426|gb|EAL51687.2| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449701673|gb|EMD42445.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 937
Score = 364 bits (935), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 242/706 (34%), Positives = 362/706 (51%), Gaps = 111/706 (15%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S+++P + + + F Y D+N +P+F E
Sbjct: 31 MGVPSFFRWLSQKFPKIIDGCQG----SFHEQYNDLN------------EPNFNGVEYDN 74
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F ++ ++G+ Q R + E +E G
Sbjct: 75 F--------------------YIDMNGLIHPCFHPQDR-------QSPETIEDMMVMLGR 107
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
L D++ + P+KL ++A+DGVAPRAKMNQQR RRF+SAK+AE E K E+
Sbjct: 108 YL------DYL-IDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFKSAKDAENAELKHAEEN 160
Query: 181 E--------RLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWK 232
+P K DSNCITPGT FM + + L+ ++K +++ W
Sbjct: 161 RNKVRNGLPEVPYIKPLDSNCITPGTEFMSVVSKTLKKYIKERMSQSSYWNK-------- 212
Query: 233 DVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFS 292
+ VILS PGEGEHKIMD+IR K PDYNPN+ HC+YGLDADLIML L THE +FS
Sbjct: 213 -LVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDADLIMLSLATHERFFS 271
Query: 293 LLREEVKFNTKSNKGGSQIVTPEET--------------KFFLLHLSLMRDYLELEFGKL 338
++RE+V F + + I +P++ F LH ++R YL++ L
Sbjct: 272 IIREKVFFEQEQCYICNNIHSPDKCPHRKEVGAMDTITKPFQFLHCHILRGYLQI---TL 328
Query: 339 KEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDG 398
K G F E +DD++ FL+GNDF+P++P L I +GA+ LL KVY+E LP G
Sbjct: 329 KVEG-----FEFERCVDDFIFFCFLVGNDFLPHIPSLDIRDGAVDLLMKVYREFLPH-GG 382
Query: 399 YINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDP 458
YI E G LN+ + FL ++ + +K Q + ++ + + + K+ +
Sbjct: 383 YITESGSLNVTNAKNFLQEVGKEEPAILEKK---CQKEKNYAKRRLDNQIRELEIKKANV 439
Query: 459 DLAALIKATD--DDYDDGTEEVLNYANYEEYYYSDEDEEWRTNF----------FSEFGQ 506
+ +K+T+ + +E L E DE+ + R +F E G
Sbjct: 440 YENSTLKSTESINTLTPEQQEQLKTQEAEIKKIEDEERKLRADFEQKELTDEVKLGEPG- 498
Query: 507 HKTDYY--HYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYIS 564
+ YY +K+D K T ++ RD Y + W L YYY GC SW WYYP+ YAP+
Sbjct: 499 YTQRYYSVKFKIDPQKDTQKI-RDIVHSYFEGMNWVLGYYYKGCQSWDWYYPYLYAPFAE 557
Query: 565 DIKDFSHLN--LKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
D+ ++ N +KY+ PF PF+QL++VLP SK LP + +LM + SPI ++YP+
Sbjct: 558 DMGEYVDYNFEIKYKESIPFRPFEQLMSVLPPRSKSCLPYQFHDLMKSKGSPISDFYPDT 617
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
F D NG+K D++A+V++ FID+ KL+ ++ +E LT E R RNR
Sbjct: 618 FELDFNGEKVDYKAIVVLTFIDQEKLLHYVEPIEMGLTGELRQRNR 663
>gi|170119902|ref|XP_001891045.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164633808|gb|EDQ98306.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 345
Score = 363 bits (931), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 196/430 (45%), Positives = 259/430 (60%), Gaps = 85/430 (19%)
Query: 10 ISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIE 69
+ ERYP SE+++E +IPEFDNLYLD NGIIHNCS ND D HFR+TE+QIF
Sbjct: 1 LRERYPLTSELIQENKIPEFDNLYLDFNGIIHNCSRLNDEDTHFRLTEEQIFT------- 53
Query: 70 ILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
L F +D + + K+
Sbjct: 54 ----------LIFTYVDHLFGKIKL----------------------------------- 68
Query: 130 FITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRF 189
KKLFF+A+DGVAPRAKMNQQR RRFR+AKEA+V+ +KA+ KGE+LP EK F
Sbjct: 69 ---------KKLFFVAVDGVAPRAKMNQQRSRRFRTAKEAKVVREKAELKGEKLPMEKAF 119
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSNCI P QLRYF+ KI+ D W++V V+LSG E PGEGEH
Sbjct: 120 DSNCIAPVNTIYGTFIDQLRYFIHKKISEDS---------NWREVKVVLSGREVPGEGEH 170
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGS 309
KIM+YIR +++P YNPN+RHCLYGLDADLIMLGL +H+P+ LLREEVKF S K +
Sbjct: 171 KIMEYIRLSRAQPGYNPNIRHCLYGLDADLIMLGLLSHDPHLCLLREEVKFGPASRKKWN 230
Query: 310 QIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFI 369
+ E F+LLHLSLMR+YL+LEF +++ +L F ++++ +ID DF+
Sbjct: 231 --TSLESVNFYLLHLSLMREYLDLEFHEIQL--MLPFDYNLKRVID-----------DFL 275
Query: 370 PNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
P+LPDLHI L L+ VY++VLP LDGY NEGG +N KR + L ++ ++ F ++
Sbjct: 276 PDLPDLHIHENGLEKLFDVYKKVLPGLDGYTNEGGVINTKRLQVILDEMTPWEQGVFEKE 335
Query: 430 YADIQYLEGK 439
Y+D+ + +GK
Sbjct: 336 YSDLNWYKGK 345
>gi|346974250|gb|EGY17702.1| 5'-3' exoribonuclease [Verticillium dahliae VdLs.17]
Length = 1404
Score = 362 bits (930), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 167/303 (55%), Positives = 224/303 (73%), Gaps = 14/303 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKKLF+MAIDGVAPRAKMNQQR RRFR+A +AE +KA + G +P E FDSNCITPG
Sbjct: 78 PKKLFYMAIDGVAPRAKMNQQRSRRFRTALDAENAREKAIKDGVEMPKEAPFDSNCITPG 137
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILSGHETPGEGEHKIMDYIR 256
T FM +L +QL+YFV K+T D W++ C ++LSGHE PGEGEHKIM+YIR
Sbjct: 138 TEFMAKLSRQLKYFVNKKVTEDADWQE----------CEIVLSGHEVPGEGEHKIMEYIR 187
Query: 257 YMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEE 316
K++PDY+ N+RHCLYGLDADLIMLGL +H+P+F LLREEV F S ++ E
Sbjct: 188 NAKAQPDYDTNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRASKTKSKEL---EH 244
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F+LLHL ++R+YL+LEF +LK+ G+L+FP+ +E +IDD++LMGF IGNDF+P+LP LH
Sbjct: 245 QNFYLLHLCIVREYLDLEFQELKQDGILNFPYDLERVIDDFILMGFFIGNDFLPHLPRLH 304
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL 436
I GAL ++++Y+ +LP DGYINEGG +NL+R ++ LT+LA + +QF +D ++
Sbjct: 305 INEGALASMFRIYKSILPECDGYINEGGVINLQRLQRLLTELAKDETDQFEHDVSDERWF 364
Query: 437 EGK 439
+ K
Sbjct: 365 QSK 367
Score = 314 bits (804), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 228/787 (28%), Positives = 397/787 (50%), Gaps = 52/787 (6%)
Query: 470 DYDDGTEEVLNYANYEEYY---YSDEDEEWRTNFF-SEFGQHKTDYYHYKLDYAKVTNEV 525
+YD T + + +++Y Y + + W+T ++ +F D Y ++
Sbjct: 477 NYDKATVVDITADDAKQHYADLYKQKYQGWKTKYYLQKFEDWSPDNY----------DKE 526
Query: 526 LRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPF 585
L E Y++ +QW L+YYY G SW W+Y +HY+P SD+ +L +++G+PF P+
Sbjct: 527 LTALCENYVQGLQWVLYYYYRGIASWPWFYAYHYSPLTSDVIKGLGADLNFKLGQPFRPY 586
Query: 586 QQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDE 645
+QL+ VLP SK ++P Y +LMT SPI+++YP +F D+NGKK +WEAVV IPFIDE
Sbjct: 587 EQLMGVLPDRSKSIVPTVYWDLMTNPKSPIVDFYPRDFELDMNGKKMEWEAVVKIPFIDE 646
Query: 646 VKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---NVNLGTALAPDYFPAINENHAVEK 702
+L+ AM V L+D+E+SRN+ G L +TY+ N +++ FP I + VE
Sbjct: 647 KRLLDAMGPVNEKLSDDEKSRNQFGVSLKFTYNPEVNFTYPSSMV-GVFPDIPQCRCVE- 704
Query: 703 PLYRDDIYVHPN----KLRKGLCQDVNLKL-YVTHFPTLKHVQFTHKI-ENAKVKVFQQP 756
+I+ P+ + R GL V + + FP++ + +T ++ E V VFQQ
Sbjct: 705 -----NIFELPSTEGLQYRSGLMDGVKISAEALAGFPSIHTLPYTGQLMEGYGVNVFQQD 759
Query: 757 SRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGP 816
SRN S+I+ + ++ + +VA + LG+ F+ YP L E ++ V + D
Sbjct: 760 SRNPSMIVTLSESEITTKAEVAKKKLGQKCFVGYPFLQEAKIVRVVDELFDYELDHTGTT 819
Query: 817 VFERAAKDMQ-DAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESR-KYFFGPRGKVT 874
V ++ + +AF + I + + +LG IG E LV+ ++ K G K
Sbjct: 820 VVQKNHGPREIEAFSREAQYIENWHAKRLGFTIGEVESLVHVHMLKGLIKTEEGALIKEY 879
Query: 875 QQRTFIRSTVTYAYQSAVLN-LQQARESLEYKT--IDEIFYPGCQCFALSNPHYGSGGCV 931
+ +RS YA Q+ V + Q +E + I+E + G + F L HYG V
Sbjct: 880 AENPSMRS--VYASQTIVDEVISQDERFIERASVPIEEEYPAGTRAFFLGEFHYGRPLEV 937
Query: 932 ISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGS 991
+ + + +S +EP+ + + + + + PSY VA L + PL+LS+ S
Sbjct: 938 LGHANNKAEIV-VSVLQAKEPEYAKPIIQEVNRQNRFTPSYAVAKMLGLHPLILSKILSS 996
Query: 992 IFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFP 1051
+ +++ G R N+GLN+KF K ++V+G+++++++ W ++ + L+ Y+ FP
Sbjct: 997 -YQVNTV--GGLRVNLGLNLKFDAKKQKVLGYSQKNQSG--WEFSNAAIELLAKYVAAFP 1051
Query: 1052 EVFGFLKDHSSDDIYLRDDVFPHQ--GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKV 1109
+ F ++ + D++P +RV +I WLK +K E P A +D+
Sbjct: 1052 DFFVAIQAKAQQSDISDTDIWPDSAVAAKRVKEIGQWLKAAETSKFERVPLDAEQLDSVT 1111
Query: 1110 VSLIEHAVDTCEKVEKQITLFVKPN--KLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCY 1167
V + A + ++ + T N + + KPT +L + KF L DRV +
Sbjct: 1112 VMKLAEAGEQAFQISQNTTTKKLNNVPRSALLKPTDAELLMG-NQKFNLGDRVTYVAATG 1170
Query: 1168 TVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSY 1225
VP+ RGT++GI G T+ + DVV+D F G + R RG + + +++N ++
Sbjct: 1171 KVPIASRGTVVGI--GRTATAVLLDVVWDVTFMSGTTLGERAPPFRGMTVASSSVLNTTH 1228
Query: 1226 GERLCGN 1232
+ + G+
Sbjct: 1229 KQVISGS 1235
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 103/130 (79%), Gaps = 1/130 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPN-DNDPHFRITEKQ 59
MGVPKFFR++SERYP +S+V+ E +IPEFD LYLDMNGIIHNC+H + D FR++E++
Sbjct: 1 MGVPKFFRWLSERYPAISQVIAENRIPEFDALYLDMNGIIHNCTHKDAGEDATFRLSEEE 60
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+F IF+YIE LF I+PKKLF+MAIDGVAPRAKMNQQR RRFR+A +AE +KA + G
Sbjct: 61 MFIRIFNYIEHLFGKIKPKKLFYMAIDGVAPRAKMNQQRSRRFRTALDAENAREKAIKDG 120
Query: 120 ERLPTEKRFD 129
+P E FD
Sbjct: 121 VEMPKEAPFD 130
>gi|322703736|gb|EFY95340.1| exonuclease Kem1 [Metarhizium anisopliae ARSEF 23]
Length = 1404
Score = 362 bits (930), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 169/307 (55%), Positives = 220/307 (71%), Gaps = 14/307 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE +KA ++G +P E+ FDSNCITPG
Sbjct: 63 PKQLFFMAIDGVAPRAKMNQQRARRFRTALDAEKAREKAIKEGVEMPKEEPFDSNCITPG 122
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILSGHETPGEGEHKIMDYIR 256
T FM +L QQLRYFV K++ D W+ C ++LSGHE PGEGEHKIM+YIR
Sbjct: 123 TEFMAKLSQQLRYFVNKKVSEDADWQG----------CEIVLSGHEVPGEGEHKIMEYIR 172
Query: 257 YMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEE 316
K++P+YNPN+RHCLYGLDADLIMLGL +H+P+F LLREEV F S ++ E
Sbjct: 173 NAKAQPNYNPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRASKAKSKEL---EH 229
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F+LLHL ++R+YLE+EF +L + G LSF F +E +IDD++LM F +GNDF+PNLP LH
Sbjct: 230 QNFYLLHLCIVREYLEMEFQELHQEGTLSFSFDLERVIDDFILMAFFVGNDFLPNLPGLH 289
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL 436
I GAL ++K+Y+ VLPT DGYINE G +N+ R +K LT+L+ + F +D ++
Sbjct: 290 INEGALANMFKIYKAVLPTCDGYINENGVINMARLDKLLTELSKLELVSFEHDISDEKWF 349
Query: 437 EGKMGKK 443
K +K
Sbjct: 350 ASKQMEK 356
Score = 310 bits (793), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 242/782 (30%), Positives = 392/782 (50%), Gaps = 43/782 (5%)
Query: 490 SDEDEEWRTNFFSE-FGQHKTDYYHYKL-DYA--KVTNEVLRDQAECYIRAIQWNLHYYY 545
S+E ++ ++E + KT YY K ++A K E + D + Y++ +QW L YYY
Sbjct: 481 SEEAQQQYEKLYNEKYAGWKTKYYLQKFPEWAPEKYEKEQI-DLCQNYVQGLQWVLFYYY 539
Query: 546 NGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQ 605
G SW W+Y +HYAP ISD+ + +L ++ G+PF P++QL+ VLP SK+++P+ Y
Sbjct: 540 KGIASWPWFYGYHYAPLISDVAKGLNADLSFKKGQPFKPYEQLMGVLPDRSKKIVPKVYH 599
Query: 606 NLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERS 665
+LMT NSPI+++YP +F D+NGKK +WEAVV IPFIDE +L+ AM LL D+E+S
Sbjct: 600 DLMTNPNSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLDAMAPKNDLLEDDEKS 659
Query: 666 RNRHGPMLVYTYS-NVNLG-TALAPDYFPAINENHAVEKPLYRDDI----YVHPNKLRKG 719
RN G + +TYS +VN + P FP I H +E D+ YV G
Sbjct: 660 RNGFGVPIKFTYSADVNFAYPSPLPGIFPEIQSCHCIENIFDLPDMEGLEYV------SG 713
Query: 720 LCQDVNLKL-YVTHFPTLKHVQFTHK-IENAKVKVFQQPSRNESIIIVQDKVQVPSLKQV 777
L +K+ + FPTL + +T + IE + VFQQ SRN SI++ + + +
Sbjct: 714 LATGALVKVEALAGFPTLHTLPYTAQIIEGYGINVFQQDSRNPSIVVTLTDTNLRTSIET 773
Query: 778 ADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKS-- 835
LG+ ++ YP L E ++ V + +N V + + ++A SK++
Sbjct: 774 FKAKLGQRCYVGYPFLQEAKIMKVQDELFSYELAENGQDVVVKDHSN-REASDFSKEAEY 832
Query: 836 ITDGYYTKLGVDIGNTEVLVYGQPVES-RKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLN 894
+ + +LGV +G E LV+ ++ K G K + +RS YA Q+ V
Sbjct: 833 LESWHAKRLGVIVGQVECLVHVHMLKGLLKTEEGALIKEYAENPSVRS--VYASQTVVDE 890
Query: 895 LQQARESL---EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQE 951
+ E E I+E F G + F L YG V VK + + +S +E
Sbjct: 891 VVNEDERFIEKEALPIEEEFPLGTRAFFLGEYAYGRPLEVTGHVKGKTEVV-VSIPRNKE 949
Query: 952 PDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNI 1011
P+ S + Q + Y PS+ VA +L + PL+LS+ T S + + + N+GLN+
Sbjct: 950 PEFSKRIIHQAERTNPYTPSFAVAKQLGVHPLVLSKITSSYQV---STAAGLKLNLGLNL 1006
Query: 1012 KFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDV 1071
KF + +V+G++R+ T W ++ + LI +YM FP+ F ++ + D+
Sbjct: 1007 KFEARKLKVLGYSRKAHTG--WEFSSLAIKLIADYMVAFPDFFAAIQKGAQRSDICETDL 1064
Query: 1072 F--PHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITL 1129
+ P QRV +V+WLK+Q +K E P A +D++VV+ + +A + + + I +
Sbjct: 1065 WNDPVVASQRVKDVVAWLKKQETSKFERVPLEAEQLDSEVVTALANAGEQVYQASQDIDI 1124
Query: 1130 --FVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSY 1187
+ I KP+ +L + F L DRV VP+ RGT+ GI + T+
Sbjct: 1125 KKLKGVPRAAILKPSDAELVLG-NQNFSLGDRVTFAASAGKVPIATRGTVAGISRTATAL 1183
Query: 1188 DAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPHVKNINVMQS 1245
+ DVV+D F G + R RG +P+ +++N + + + +S K S
Sbjct: 1184 --LLDVVWDTSFMSGTTLGERAPMFRGQTVPSSSVLNTTDKQVISASSKSQQKRATSTIS 1241
Query: 1246 RG 1247
G
Sbjct: 1242 TG 1243
>gi|167376304|ref|XP_001733946.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165904779|gb|EDR29935.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 889
Score = 361 bits (926), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 244/707 (34%), Positives = 360/707 (50%), Gaps = 113/707 (15%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S+++P + + + F Y D+N +P+F E
Sbjct: 1 MGVPSFFRWLSQKFPKIIDSCQG----SFHEQYNDLN------------EPNFNGVEYDN 44
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F ++ ++G+ Q R + E +E G
Sbjct: 45 F--------------------YIDMNGLIHPCFHPQDR-------QSPETIEDMMVMLGR 77
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
L D++ + P+KL ++A+DGVAPRAKMNQQR RRF+SAKE + E+K E+
Sbjct: 78 YL------DYL-IDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFKSAKEVDDNERKQAEEN 130
Query: 181 E--------RLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWK 232
+P + DSNCITPGT FM + + L+ ++K +++ W
Sbjct: 131 RNRVMNGLPEIPYVRPLDSNCITPGTEFMSAVSKALKKYIKERMSQSSYWNK-------- 182
Query: 233 DVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFS 292
+ VILS PGEGEHKIMD+IR K PDYNPN+ HC+YGLDADLIML L THE +FS
Sbjct: 183 -LVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDADLIMLSLATHERFFS 241
Query: 293 LLREEVKFNTKSNKGGSQIVTPEET--------------KFFLLHLSLMRDYLELEFGKL 338
++RE+V F + + I +P++ F LH ++R YL++ L
Sbjct: 242 IIREKVFFEQEQCYICNGIHSPDKCPHRKEVGALDTIIKPFQFLHCHILRGYLQI---TL 298
Query: 339 KEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDG 398
K G F E +DD++ FL+GNDF+P++P L I +GA+ LL KVY+E LP G
Sbjct: 299 KVEG-----FEFERCVDDFIFFCFLVGNDFLPHIPSLDIRDGAVDLLMKVYREFLPH-GG 352
Query: 399 YINEGGYLNLKRFEKFLTKL-----ASFDFEQFREK-YA------DIQYLEGKMGKKFSD 446
YI E G LN+ + FL ++ A + +EK YA I+ LE K + +
Sbjct: 353 YITESGSLNVTNAKNFLREVGKEEPAILETRNKKEKNYAKRRLDNQIRDLELKKANIYEN 412
Query: 447 VFHK--EKSKEMDPDLAALIKATDDDYDD-GTEEVLNYANYEEYYYSDEDEEWRTNFFSE 503
K E + P+ +K + + EE +E+ SDE + +
Sbjct: 413 STLKSTESINSLTPEQQEQLKIQEAEIKSIENEERKLREEFEKKELSDELKLGEPGYIQR 472
Query: 504 FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYI 563
+ K +K++ K T +V RD Y + W L YYY GC SW WYYP+ YAP+
Sbjct: 473 YYNVK-----FKINPKKDTQKV-RDIVHSYFEGMNWVLGYYYKGCQSWDWYYPYLYAPFA 526
Query: 564 SDIKDFSHLN--LKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
D+ ++ N +KY+ PF PF+QL++VLP SK LP + +LM + SPI E+YP+
Sbjct: 527 EDMGEYVDYNFTIKYKESIPFRPFEQLMSVLPPKSKSCLPYQFHDLMKSKGSPISEFYPD 586
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
F D NG+K D++A+ ++ FID+ KL+ ++ +E LT E R RNR
Sbjct: 587 TFELDFNGEKVDYKAIAVLNFIDQEKLLHYVEPIEMELTGELRQRNR 633
>gi|167383239|ref|XP_001736453.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165901153|gb|EDR27303.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 858
Score = 360 bits (924), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 239/706 (33%), Positives = 354/706 (50%), Gaps = 111/706 (15%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++ +R+P +++ + Q P Y D+N PN N +
Sbjct: 1 MGVPSFFRWLKQRFP---KIIDDCQ-PSSQEKYGDLN-------EPNTNGVEY------- 42
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F++ ++G+ Q R Q A+ +
Sbjct: 43 ------------------DNFYIDMNGLIHPCLHPQDR--------------QAAESVED 70
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+ R+ + P+KL ++A+DGVAPRAKMNQQR RRF+SAK+AE E K E+
Sbjct: 71 MMVLLTRYLDYLIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFKSAKDAENAELKQAEEN 130
Query: 181 E--------RLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWK 232
+P + FDSNCITPGT FM + + L+ ++K +++ W
Sbjct: 131 RNRAKNGLPEIPYVRPFDSNCITPGTEFMSVVSKTLKKYIKERMSQSSYWNK-------- 182
Query: 233 DVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFS 292
+ VILS PGEGEHKIMD+IR K PDYNPN+ HC+YGLDADLIML L THE +FS
Sbjct: 183 -LVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDADLIMLSLATHERFFS 241
Query: 293 LLREEVKFNTKSNKGGSQIVTPEET--------------KFFLLHLSLMRDYLELEFGKL 338
++RE+V F ++I P++ F LH ++R YL++ L
Sbjct: 242 IVREKVFFEQDQCYICNKIHPPDKCPHRKEVGALDTIIKPFQFLHCHILRGYLQI---TL 298
Query: 339 KEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDG 398
K G F E +DD++ FL+GNDF+P +P L I +G + LL KVY+E LP G
Sbjct: 299 KVEG-----FEFERCVDDFIFFCFLVGNDFLPRIPSLDIRDGGVDLLMKVYREFLPH-GG 352
Query: 399 YINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDP 458
YI E G LN+ + FL ++ + +KY Q + K F + + +S++
Sbjct: 353 YITESGSLNVTNAKNFLREVGKEEPAILEKKY---QKEKMNAKKNFDNQMKQLESRKASI 409
Query: 459 DLAALIKATD--DDYDDGTEEVLNYANYEEYYYSDEDEEWRTNF----------FSEFGQ 506
+ +K+T+ + +E L E + + F E G
Sbjct: 410 YENSTLKSTESINSLTPEQQEQLKIQEAEIKSIEQRENRLKERFKKAEEKDLLKMGESG- 468
Query: 507 HKTDYYH--YKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYIS 564
+ YY+ +K++ K T +V RD Y + W L YYY GC SW WYYP+ YAP+
Sbjct: 469 YTQRYYNVKFKINPKKDTQKV-RDIVHSYFEGMNWVLGYYYKGCQSWDWYYPYLYAPFAE 527
Query: 565 DIKDFSHLN--LKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
D+ ++ N KY+ PF PF+QL++VLP SK LPE + +LM + SPI E+YP+
Sbjct: 528 DMGEYVDYNFEFKYKKSIPFRPFEQLMSVLPPRSKSCLPEQFHDLMKSKGSPISEFYPDT 587
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
F D NG+K D++A+V++ FID+ KL+ + +E L + + RNR
Sbjct: 588 FKLDFNGEKVDYKAIVVLTFIDQEKLLHYVKPIEKKLKGDAKRRNR 633
>gi|145347657|ref|XP_001418279.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578508|gb|ABO96572.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 509
Score = 359 bits (921), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 213/518 (41%), Positives = 281/518 (54%), Gaps = 92/518 (17%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P K+ +MAIDGVAPRAKMNQQR RRFRSA EA ++A+ +GE P + FDSNCITPG
Sbjct: 77 PNKMLYMAIDGVAPRAKMNQQRSRRFRSAAEAAKDREEARARGEPEPEGEPFDSNCITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL + L+++V+ K T D LW V VILSGHE GEGEHKIM++IR+
Sbjct: 137 TEFMARLTEHLKFYVRKKQTEDPLWAK---------VTVILSGHEVRGEGEHKIMEHIRW 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ--IVTPE 315
+++PD+ PN HCLYGLDADLIML L THEP+F LLRE VKF S+ + P
Sbjct: 188 ARTQPDWEPNQTHCLYGLDADLIMLALVTHEPHFCLLREVVKFGGGEKGQPSREILSNPT 247
Query: 316 ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
+ F LLH+ L+R+YL+LEF + P F + +E +IDD++L+ L+GNDF+P
Sbjct: 248 DDGFILLHIGLLREYLDLEFREKNLP----FGYELERVIDDFILLCMLVGNDFLP----- 298
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNL-KRFEKFLTKLASFDFEQFREKYADIQ 434
LPTL+ I EG L K + L L
Sbjct: 299 ----------------ALPTLN--IAEGALNTLFKVYHDTLPMLGG-------------- 326
Query: 435 YLEGKMGKKFSDVFHKEKSKE---MDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSD 491
Y+ G G F+ E S + M+ ALI +G EE L
Sbjct: 327 YITGDEG---GGTFNPELSADPTMMNAAKRALIL-------EGGEEGL------------ 364
Query: 492 EDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSW 551
+ W K YY KL L + + Y + W L YYY G SW
Sbjct: 365 --QAW-----------KDTYYREKLGLKIGEAAPLGEIRQAYFDGLNWVLRYYYRGVASW 411
Query: 552 SWYYPHHYAPYISDI-KDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
+WYYP+HYAP SD+ L +++ GEPF PF+QL+AV P +S +LLPEP+++ M
Sbjct: 412 TWYYPYHYAPMASDLCAGMGGLTSEFDYGEPFKPFEQLMAVQPPSSSKLLPEPFRHFMED 471
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKL 648
SP+ E++PE+ D GK+ DWE VVL+PF+D +L
Sbjct: 472 PQSPLAEFFPEDIKVDFEGKRNDWEGVVLLPFLDADRL 509
Score = 159 bits (401), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/129 (56%), Positives = 94/129 (72%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR+++ERYP L + + QIP DNLYLDMNG+IHNCSH D + R+TE ++
Sbjct: 1 MGVPKFFRWLAERYPLLQQEIAGNQIPGIDNLYLDMNGVIHNCSHGAGTDVNTRMTEDEM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+F Y++ LFRM +P K+ +MAIDGVAPRAKMNQQR RRFRSA EA ++A+ +GE
Sbjct: 61 MSKVFAYLDHLFRMTRPNKMLYMAIDGVAPRAKMNQQRSRRFRSAAEAAKDREEARARGE 120
Query: 121 RLPTEKRFD 129
P + FD
Sbjct: 121 PEPEGEPFD 129
>gi|353234672|emb|CCA66695.1| probable KEM1-5`-3` exonuclease component of cytoplasmic processing
(P) bodies [Piriformospora indica DSM 11827]
Length = 1438
Score = 358 bits (920), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 175/315 (55%), Positives = 222/315 (70%), Gaps = 25/315 (7%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+FFMAIDGVAPRAKMNQQR RRFR+AKE + L +KA KGE+LP EK FDSNCITPG
Sbjct: 57 PRKVFFMAIDGVAPRAKMNQQRSRRFRTAKETKDLVEKALRKGEKLPDEKAFDSNCITPG 116
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
TPFM RL QL+YFV KIT D W+DV VILSGHE PGEGEHKIM+YIR
Sbjct: 117 TPFMARLSLQLQYFVNKKITEDS---------NWRDVQVILSGHEVPGEGEHKIMEYIRL 167
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K++ DYNPN RHCLYGLDADLIMLGL +H+P+F+LLREEVKF ++ K T E
Sbjct: 168 SKAQKDYNPNTRHCLYGLDADLIMLGLLSHDPHFALLREEVKFGPQAKKKSG---TLETQ 224
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPG-------------VLSFPFSIENIIDDWVLMGFLI 364
FFLLHL L R+YL LEF L +P +L F +S+E IIDD++L+ +
Sbjct: 225 SFFLLHLCLFREYLNLEFQPLWDPKAINIADPSASSKPILPFEYSLERIIDDFILLAVFV 284
Query: 365 GNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFE 424
GNDF+P+LPDLHI + AL +L++ Y+E LP GY+NE G +N +R + L LA+F+ +
Sbjct: 285 GNDFLPHLPDLHIHDNALEVLFEKYRETLPKAGGYLNESGVINTERLQMVLDALATFEQQ 344
Query: 425 QFREKYADIQYLEGK 439
F ++++D+ + + K
Sbjct: 345 AFEKEHSDMNWFKSK 359
Score = 328 bits (841), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 238/762 (31%), Positives = 395/762 (51%), Gaps = 60/762 (7%)
Query: 493 DEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWS 552
DE + T + K YY KL+ E + YI +QW +HYYY+G SW
Sbjct: 498 DERYETTLKARMDNWKRQYYQEKLEIKYDDKEAMDKLVYRYIEGLQWVMHYYYSGVASWG 557
Query: 553 WYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLEN 612
W+Y +HYAP ISD+K + +++G PF P++QL+ VLPAAS+E +P+ Y++LM
Sbjct: 558 WFYDYHYAPRISDLKGVDKMKFDFKLGIPFRPYEQLMGVLPAASQEHIPQAYRDLMYDPT 617
Query: 613 SPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPM 672
SPIL++YP +F +DLNGKKQ+WEA+V IPFI+E +L++AM + EH LT EE+ RN G
Sbjct: 618 SPILDFYPTDFESDLNGKKQEWEAIVKIPFINEQRLLQAMASREHRLTKEEKERNTVGTS 677
Query: 673 LVYTYS---NVNLGTALAPDYFPAINENHAVEKPL---YRDDIYVHPNKLRKGLCQDVNL 726
L +TYS ++ ++L P +FP I+ H + KP D ++ L KGL + V L
Sbjct: 678 LTFTYSPSQDIVYPSSL-PGFFPDIHHCHCITKPFNLPTLDGLH-----LVKGLLEGVGL 731
Query: 727 KLY-VTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGK 784
++ + FP+L + T ++ + V VFQ SRN+S+++ +++ + + + A++++GK
Sbjct: 732 GVHAMAGFPSLDTLPHTAQLIHHSVNVFQADSRNQSVVLYIKNLWEGSNTLKAAEKLIGK 791
Query: 785 TIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLS----KKSITDGY 840
+F N+P L E V A++ R + + V + A A LS K +
Sbjct: 792 RVFYNWPFLQEGMVVALSDSHFRYEYQRYGNGV--KVAGSQHSAPGLSNWARKAEGHESR 849
Query: 841 YTK-LGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAV--LNLQQ 897
Y+K GV G+ ++LV+ +P++ + G + + Q V +N +
Sbjct: 850 YSKRFGVITGDVDILVHVRPLKGLRS--KDDGSLVKDWDDADKETDLPLQMLVQEVNFED 907
Query: 898 AR--ESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVK--EENSF-IKLSFKVQQEP 952
R E +DE F G + F L YG V++ V+ E+N+ + L+F +++
Sbjct: 908 ERFMEQAAPSLVDE-FPQGSKVFFLGEHAYG----VVAQVEGVEKNALTVTLAFFPKEKA 962
Query: 953 DLSDLVHLQDDTVY-NYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNI 1011
+ L ++ +Y +Y VA+ L ++ L +S+ T S+ +I S +G+K N+GL++
Sbjct: 963 ENEQLTNIALSAAQPDYYTAYNVANMLRMTGLAVSKITSSLMVISS--DGSKT-NLGLSL 1019
Query: 1012 KFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDV 1071
KF K +V+ +TR + W ++ + V L+++Y FP++F L D+ D + +V
Sbjct: 1020 KFQGKGLKVLTYTRME--GNGWEFSAKAVELLRDYKAAFPQLFSKL-DNRGDAMLKASEV 1076
Query: 1072 FPHQG-EQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD------TCEKVE 1124
F + + +V +WL E+ E P ++ + +S IE A T ++
Sbjct: 1077 FIGKDPDAQVKAAKAWLAERGIKDLEPVPLSTETLEKETISQIEAAAAQIAASRTATGIK 1136
Query: 1125 KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGE 1184
K + + P +L D FKL DRV+ ++D VPL +G ++GIV
Sbjct: 1137 KAKVQGIPRQAVLKPIQVRSRL---KDQVFKLGDRVIMVQDSGGVPLCNKGIVVGIV--- 1190
Query: 1185 TSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
D M DVV+D F G + RCSE RG + +NL+
Sbjct: 1191 ---DKMIDVVWDNAFIGGSTLGGRCSEYRGSTCTINSCLNLT 1229
Score = 161 bits (407), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/109 (67%), Positives = 87/109 (79%)
Query: 21 VREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKL 80
+R Q P DNLY+D NGIIHNCSHPND D HFR++E+QIF IF Y+E LF I+P+K+
Sbjct: 1 MRTKQNPILDNLYVDFNGIIHNCSHPNDGDVHFRLSEEQIFTSIFAYVEHLFTKIKPRKV 60
Query: 81 FFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
FFMAIDGVAPRAKMNQQR RRFR+AKE + L +KA KGE+LP EK FD
Sbjct: 61 FFMAIDGVAPRAKMNQQRSRRFRTAKETKDLVEKALRKGEKLPDEKAFD 109
>gi|326494150|dbj|BAJ85609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1014
Score = 358 bits (920), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 207/573 (36%), Positives = 309/573 (53%), Gaps = 84/573 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT 185
FD+I FC P+K+ +MAIDGVAPRAKMNQQR RRFR+AK+A + +
Sbjct: 83 FDYIDHLFCLVRPRKVLYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLRLEFEA 142
Query: 186 EKR----------FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
E R DSN ITPGTPFM L L+Y+++L++ W+ V
Sbjct: 143 EGRNLVRKEKSEAIDSNVITPGTPFMFVLSSALQYYIQLRLNHSP---------GWQSVK 193
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ P ++PN RH LYGLDADLIML L THE +FS+LR
Sbjct: 194 VILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHVLYGLDADLIMLALATHEVHFSILR 253
Query: 296 EEVKFNTKSNK-----------GGSQIVTPEET----------KFFLLHLSLMRDYLELE 334
E + + K Q P + K+ L++ ++R+YLE +
Sbjct: 254 EVITMPGQHEKCFLCGQVGHLAAECQGPGPADNVVELPPIHKKKYQFLNIWVLREYLEKD 313
Query: 335 FGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLP 394
+ P F ++E I+DD+V + F +GNDF+P++P L I GA+ LL +Y+
Sbjct: 314 LEIVDPP----FKINLERILDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMNIYRAEFK 369
Query: 395 TLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSK 454
+ GY+ +GG + L+R E F+ +A + + FR++ ++ K + + E +
Sbjct: 370 PMGGYLTDGGEVLLERVEHFIQAVAIHEEQIFRKR--------ARIQKAYEN---NEDRR 418
Query: 455 EMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHY 514
D+ + ++ Y D + L + E YY+++ F E +
Sbjct: 419 RAQGDI-----SEENQYVDMVK--LGEPGFRERYYAEK--------FREEAE-------- 455
Query: 515 KLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNL 574
+K ++V RD + Y+ + W + YYY G SW W+YP+HYAP+ SD+K + +
Sbjct: 456 ----SKPIDQVQRDVVQKYVEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKSLTEFEI 511
Query: 575 KYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDW 634
+ +G+PF PF QL+ LPAAS LP+ Y +LMT NSP+ +YP++F D+NGK+ W
Sbjct: 512 TFFLGQPFKPFDQLMGTLPAASSNALPKHYGDLMTDPNSPLNYFYPKDFEIDMNGKRFAW 571
Query: 635 EAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
+ + +PFIDE +L+ +E LT+EER RN
Sbjct: 572 QGIAKLPFIDERRLLAETQKLEDTLTEEERFRN 604
Score = 110 bits (274), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 75/123 (60%), Gaps = 22/123 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ---------IP-----------EFDNLYLDMNGII 40
MGVP F+R++++RYP E + +P EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAEEKEPVELEPGAFVPVDPRRPNPNGLEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP T ++F+ IF YI+ LF +++P+K+ +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCFHPEGRPS--PTTYDEVFKSIFDYIDHLFCLVRPRKVLYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFR 103
RFR
Sbjct: 119 RFR 121
>gi|62318783|dbj|BAD93823.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1012
Score = 358 bits (919), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 227/643 (35%), Positives = 334/643 (51%), Gaps = 105/643 (16%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK------ 179
FD+I F P+KL FMAIDGVAPRAKMNQQR RRFR+AK+A + ++
Sbjct: 84 FDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARRFRAAKDAAEAAAEEEQLREEFER 143
Query: 180 -GERLPTE---KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
G++LP + + FDSN ITPGT FM L LRY++ +++ +D WK++
Sbjct: 144 EGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYIHVRLNSDP---------GWKNIK 194
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR K+ P YNPN HCLYGLDADLIML L THE +FS+LR
Sbjct: 195 VILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIMLSLATHEIHFSILR 254
Query: 296 EEVKFNTKSNK---------------GGSQIVTPE-----------ETKFFLLHLSLMRD 329
E V F + K G + T E + + +++ ++R+
Sbjct: 255 EVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVVKKPYEFVNIWILRE 314
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YLE + ++ PG +++ +IDD++ + F +GNDF+P++P L I GA+ LL VY
Sbjct: 315 YLEHD---MQIPGAKK---NLDRLIDDFIFICFFVGNDFLPHMPTLEIREGAIELLMSVY 368
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF-------------------REKY 430
+ + Y+ + LNL+ E+F+ + ++ + F R+K
Sbjct: 369 KNKFRSAKKYLTDSSKLNLRNDERFIKAVGMYENQIFQKRAQVQQSQSERFRRDKARDKA 428
Query: 431 ADIQYLEGKMGKKFSDVFHK-------EKSKEMDPDLAALIKATDDDYDDGTEEVLNYAN 483
D + ++FS + S P L + DD+ E N
Sbjct: 429 RDNARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGVANVETENSLK 488
Query: 484 YEEYYYSDEDEEWRT-----------NFFSEFGQH----------KTDYYHYKLDYAKV- 521
EE D +E+ + F S G+ + YY K V
Sbjct: 489 AEEL---DNEEDLKFKLKKLLRDKGDGFRSGNGEQDKVKLNKVGWRERYYEEKFAAKSVE 545
Query: 522 -TNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGE 580
++ RD Y + W +HYYY+G SW+W+YP+HYAP+ SD+K L++K+E+G
Sbjct: 546 EMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGS 605
Query: 581 PFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLI 640
PF PF QLLAVLP+AS LPE Y++LMT +SPI ++YP +F D+NGK+ W+ + +
Sbjct: 606 PFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRYSWQGISKL 665
Query: 641 PFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLG 683
PF++E +L++A VE LT+EE RN +++ ++ LG
Sbjct: 666 PFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLFVVASHPLG 708
Score = 121 bits (303), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 78/124 (62%), Gaps = 23/124 (18%)
Query: 1 MGVPKFFRYISERYPC-LSEVVRE---------YQIP-----------EFDNLYLDMNGI 39
MGVP F+R++ +RYP + EV+ E IP E+DNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 40 IHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
IH C HP D TE +FQ +F YI+ LF M++P+KL FMAIDGVAPRAKMNQQR
Sbjct: 61 IHPCFHPEDKPSPTTFTE--VFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRA 118
Query: 100 RRFR 103
RRFR
Sbjct: 119 RRFR 122
>gi|357471609|ref|XP_003606089.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355507144|gb|AES88286.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 866
Score = 357 bits (915), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 248/717 (34%), Positives = 367/717 (51%), Gaps = 128/717 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVR---EYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITE 57
MGVP F+R++ +YP E + E+DNLYLDMN IIH C HPN +D + T
Sbjct: 1 MGVPSFYRWLLNKYPKAFEDINPNTNTTNVEYDNLYLDMNSIIHPCFHPN-DDDNNNGTP 59
Query: 58 KQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 117
F ++F + F ID + AK
Sbjct: 60 PTTFVEVFANM-------------FEYIDRLVTIAK------------------------ 82
Query: 118 KGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 177
P+KL +MAIDGVAPRAKMNQQR RRFR+ K+ E+ E + +
Sbjct: 83 --------------------PRKLLYMAIDGVAPRAKMNQQRTRRFRNVKDDEMREVEEE 122
Query: 178 --------EKGERLPTEK--RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
E + LP ++ DSN ITPGT FM ++ L+ ++ KI++D LWK +
Sbjct: 123 RLRKEFEMEGKQVLPKQECEVSDSNIITPGTDFMHQISNALKSYISSKISSDPLWKGIM- 181
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
VILS PGEGEHK+M +IR + PDY+PN HCLYG DADLIMLGL H
Sbjct: 182 --------VILSDANVPGEGEHKVMSFIRKQRGLPDYDPNTVHCLYGSDADLIMLGLSCH 233
Query: 288 EPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFP 347
EP+FS+LRE + ++ +F LLH+ L+R+YLE+E K+++P +F
Sbjct: 234 EPHFSILREVI---LDPPDRYEKLPPNAPMRFKLLHIWLLREYLEIEM-KIEDPPK-NFV 288
Query: 348 FSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYI------- 400
F +E I+DD++ + F GNDF+P+LP L+I A+ LL VY++ + GY+
Sbjct: 289 FDLERIVDDFIFICFFSGNDFLPHLPSLYIHEDAIDLLMTVYKKEFSKIGGYLVDINKIG 348
Query: 401 -NEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKE---- 455
G Y+ L R EKF+ + +++ + F ++ A + K+ + SD E SK+
Sbjct: 349 EKHGAYVKLSRVEKFVLMVGTYEEKIFSKRTA---IRDKKLRRLISD---NENSKQEELN 402
Query: 456 ----MDPD------LAALIK---ATDDDYDDGTEEVL-NYANYEEYY---YSDEDEEWRT 498
MD D A IK A+D+ EE+L N + +E D+ + +++
Sbjct: 403 SHDCMDFDNENSSNCALRIKKAEASDNVCPQSDEEILKNTKDLKEKLKKCIKDKGDLFKS 462
Query: 499 NFF----SEFGQ--HKTDYYHYKLDYAKVTNEVLRDQ--AECYIRAIQWNLHYYYNGCVS 550
F + G K YY K TN L+ + + Y + W L YY++G S
Sbjct: 463 GDFLTDKIKLGNVGFKERYYKEKFSVEGSTNIELKRKEIVQKYTEGLLWVLQYYFSGVAS 522
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
W+W+YP+HY P++SD+K + + + +E G PFLPF QLL+VLP S LP+ Y LM
Sbjct: 523 WTWFYPYHYGPFVSDLKGMAQVRVNFEKGVPFLPFDQLLSVLPQKSAYALPKAYAQLMLD 582
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
E S I + Y ++F D+ GK+ W+ V +P++DE +L+ +++ L++ E RN
Sbjct: 583 EQSKIFDLYSQDFEIDIEGKRFMWQGVCKLPYMDEKRLLTETRELKNELSESEAKRN 639
>gi|440792890|gb|ELR14098.1| zinc knuckle domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 862
Score = 356 bits (914), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 240/736 (32%), Positives = 336/736 (45%), Gaps = 147/736 (19%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIP---------------EFDNLYLDMNGIIHNCS 44
MGVP FFR++ +RYP +++ V E EFD+L+LDMNG
Sbjct: 1 MGVPSFFRWLMKRYPHVVTDCVEEEHSGDDDINKKLGPNPNGMEFDSLFLDMNG------ 54
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
I+ R P+ DG AP
Sbjct: 55 -------------------------IIHRATHPE-------DGPAP-------------- 68
Query: 105 AKEAEVLEQKAKEKGERLPTEKRFDFI--TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
+ E E F FI + P+KL ++ IDGVAPRAKMNQQR RR
Sbjct: 69 -------------ESEEAMMEVMFAFIERLVNIVRPRKLLYIGIDGVAPRAKMNQQRSRR 115
Query: 163 FRSAKEAEVLEQKAKEKGE-----RLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKIT 217
F +AK LE++AK K E + P + FD N ITPGT FM R + LR KI+
Sbjct: 116 FLAAKHR--LEEEAKAKAEPADGGKQPAKPIFDHNVITPGTEFMARAAEALRAHFARKIS 173
Query: 218 TDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDA 277
D W + VILS PGEGEHKIM++IR+ + + YNPN +YGLDA
Sbjct: 174 ADP---------NWSPLAVILSDSCVPGEGEHKIMEFIRHQRIQEGYNPNAHMAVYGLDA 224
Query: 278 DLIMLGLCTHEPYFSLLREEVKFNT--KSNKGG---------------------SQIVTP 314
DLI L L HEP FS+LREEV T +K G P
Sbjct: 225 DLIFLTLAQHEPRFSILREEVSSVTCFVCHKVGHISTDCPQLHPEEHKHDDDDEENDEQP 284
Query: 315 EETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPD 374
E +F +H ++R+YL+ EF L LSFP+S+E +IDD++++ FL GNDF+P LP
Sbjct: 285 PELRFQWVHTQVLREYLDREFRHLS----LSFPYSLERVIDDFIVICFLAGNDFLPRLPS 340
Query: 375 LHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQ 434
+ I GA+ L Y+ LP LDGYI G ++ +R E + +A+ + +E+ + +
Sbjct: 341 VAIHEGAIDTLIGAYKHHLPQLDGYICTNGNIDFRRLEHVVAMVAASEEAVLKERKKNFR 400
Query: 435 YLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDE 494
+ + ++ ++ D D + +++ Y +E S EDE
Sbjct: 401 RRQLQEKALLRELAQRDDDDGDDGDDDDDGGHRRGKGKEAGHKLVRYKR-KEGKRSREDE 459
Query: 495 EWRT-----------NFFSEFGQH--KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNL 541
G+ + Y K E + Y+ +QW
Sbjct: 460 AGEIEKECLDEDEEEEDLVRIGERGWRDRYVMQKFGVPSANREFYQGVVRAYVEGLQWVA 519
Query: 542 HYYYNGCVSWSWYYPHHYAPYISDIKDFSHLN-----LKYEMGEPFLPFQQLLAVLPAAS 596
YY+ GCVSW W+YP+HY P + ++D +++ EPF PF QL+AVLPAAS
Sbjct: 520 RYYWQGCVSWKWFYPYHYPPMATMLEDIGRFRSAEVVASFQLAEPFHPFAQLMAVLPAAS 579
Query: 597 KELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQ--DWEAVVLIPFIDEVKLIKAMDA 654
LP P Q LMT SPI +YYP + D++G +W VV +PF+DE +L+ +
Sbjct: 580 AHALPPPCQALMTSAQSPIADYYPTKIEIDMDGVSHNLEWAGVVKLPFVDENRLLAVIKP 639
Query: 655 VEHLLTDEERSRNRHG 670
+E LT EE RN G
Sbjct: 640 LESQLTAEEVHRNSFG 655
>gi|342878482|gb|EGU79819.1| hypothetical protein FOXB_09678 [Fusarium oxysporum Fo5176]
Length = 1380
Score = 356 bits (913), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 166/311 (53%), Positives = 223/311 (71%), Gaps = 15/311 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE +KA ++G +P E+ FDSNCITPG
Sbjct: 43 PKQLFFMAIDGVAPRAKMNQQRSRRFRTALDAEKAREKAIKEGVEIPKEEPFDSNCITPG 102
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILSGHETPGEGEHKIMDYIR 256
T FM +L QQLRYFV K++ D W+ C ++LSGHE PGEGEHKIM+YIR
Sbjct: 103 TEFMAKLSQQLRYFVNKKVSEDTDWQG----------CEIVLSGHEVPGEGEHKIMEYIR 152
Query: 257 YMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEE 316
K++P+YN N+RHCLYGLDADLIMLGL +H+P+F LLREEV F S ++ E
Sbjct: 153 NAKAQPNYNQNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRASKTKSKEL---EH 209
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F+LLHL ++R+YLE+EF +L+E G LSFPF +E +IDD++LM F +GNDF+PNLP LH
Sbjct: 210 QNFYLLHLCIVREYLEMEFQELQEDGALSFPFDLERVIDDFILMAFFVGNDFLPNLPSLH 269
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL 436
I GAL ++++Y+ +LP DGY+NE G +N++R ++ L +L+ + + F +D ++
Sbjct: 270 INEGALAKMFRIYKSILPKCDGYMNENGVINMERLQRLLGELSKTEIDAFENDVSDEKWF 329
Query: 437 EGK-MGKKFSD 446
K M KK +
Sbjct: 330 ASKQMEKKLEN 340
Score = 304 bits (778), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 239/820 (29%), Positives = 387/820 (47%), Gaps = 59/820 (7%)
Query: 486 EYYYSDEDEEWRTNFF-SEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYY 544
E Y D+ + W+T ++ +F + D Y ++ L E Y++ +QW L+YY
Sbjct: 470 EKLYQDKYQGWKTKYYLQKFEEWAPDNY----------DKELTALCENYVQGLQWVLYYY 519
Query: 545 YNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPY 604
Y G SW W+Y +HYAP ISD+ +L ++ G+PFLP++QL+ VLP SK+++P+ Y
Sbjct: 520 YQGIASWPWFYGYHYAPLISDVVKGVGADLNFKKGQPFLPYEQLMGVLPDRSKKIVPKVY 579
Query: 605 QNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEER 664
+LMT +SPI+++YP +F D+NGKK DWEAV+ IPFIDE +L+ AM LL +E+
Sbjct: 580 HDLMTNPDSPIIDFYPRDFELDMNGKKMDWEAVIKIPFIDEKRLLAAMAPKNELLEPDEK 639
Query: 665 SRNRHGPMLVYTYS-NVN-LGTALAPDYFPAINENHAVEKPLYRDDI--YVHPNKLRKGL 720
+RN G L +TYS V+ + + P FP I +E D+ + + L G
Sbjct: 640 ARNGFGVPLKFTYSPEVDFVYPSPLPGVFPEIQNCRCIENIFDLPDMEGLEYLSGLTNGA 699
Query: 721 CQDVNLKLYVTHFPTLKHVQFTHK-IENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVAD 779
V+ + FP+L + +T + +E V VFQ SRN SI + + + + +
Sbjct: 700 LLSVDA---LAGFPSLHTLPYTAQLVEGYGVNVFQADSRNPSICVTLTETENRTKIETWK 756
Query: 780 QILGKTIFINYPHLIEIRVQAVATKDSRISFD--KNSGPVFERAAKDMQDAFQLSKKSIT 837
+G F+ YP L E +V + +D S++ +N + + + + A +
Sbjct: 757 AKIGHRCFVGYPFLQEAKV--IKVQDELFSYEMAENGKDIVTKDHNNREAADWAKEADYL 814
Query: 838 DGYYTK-LGVDIGNTEVLVYGQPVESR-KYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNL 895
+ ++ K L + IG E LVY ++ + G K + +RS TYA Q+ V +
Sbjct: 815 ENWHAKRLAITIGQVECLVYVHMLKGLIRTEEGALIKEYAENPSLRS--TYAAQTIVDEV 872
Query: 896 QQARESL---EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEP 952
E E I+E F G + F L YG V + + + +S +EP
Sbjct: 873 VNEDERFIEKEALPIEEEFPRGTRAFFLGEYAYGRPLEVAAHANNKAEIV-VSMLKNKEP 931
Query: 953 DLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIK 1012
D + + Q + Y PS+ VA +L I PL+LS+ T S II+S N+K
Sbjct: 932 DFAKQIIHQAERSNPYTPSFAVAKQLGIHPLVLSKITSSYQIINSAGLRLNLGL---NLK 988
Query: 1013 FSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVF 1072
F + +V+G++R+ T W ++ + LI +YM FP+ F ++ L D++
Sbjct: 989 FEGRKLKVLGYSRKSHTG--WEFSGMAIKLIADYMVAFPDFFAAIQREPQKSEVLETDLW 1046
Query: 1073 --PHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLF 1130
P QRV +IV+WLK+Q +K E P A +D++VV + + + + I +
Sbjct: 1047 NDPSVASQRVKEIVAWLKKQETSKFERVPLEAEQLDSEVVKALANVGEQIHAASQDIDI- 1105
Query: 1131 VKPNKLY-IPKPTL----DKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGET 1185
KL +P+ L D F L DRV + VP+ RGT+ GI + T
Sbjct: 1106 ---KKLRGVPRSALLKPSDAEMVLGSQNFALGDRVTYVSAAGKVPIATRGTVAGISRTAT 1162
Query: 1186 SYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPHVKNINVM 1243
+ + DVV+D F G + R RG + + +++N + + + S + +
Sbjct: 1163 AL--LLDVVWDTSFMSGTTLNERAPMFRGQTVASSSVLNTTNKQVISTTSKSQQRRPVIA 1220
Query: 1244 QSRGERNTNYAQVTRQPQ--------RTTFYKENAPLVNS 1275
G N Q P R N+P NS
Sbjct: 1221 AQGGYANVGVTQYKDAPAPGPLRGGWRGALNGSNSPGRNS 1260
>gi|359487905|ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
Length = 950
Score = 355 bits (912), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 220/588 (37%), Positives = 317/588 (53%), Gaps = 78/588 (13%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEV-------LEQKAKE 178
FD+I F P++L +MAIDGVAPRAKMNQQR RRFR+AK+A L ++ +
Sbjct: 79 FDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFRAAKDAAEAEAEEERLRKEFEV 138
Query: 179 KGERL-PTEK--RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
+G+ L P EK DSN ITPGT FM L L+Y++ ++ + W T
Sbjct: 139 EGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIHSRLNRNPGWCST---------K 189
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ +NPN RHCLYGLDADLIML L THE +FS+LR
Sbjct: 190 VILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLYGLDADLIMLSLATHEVHFSILR 249
Query: 296 EEVKFNTKSNKG--------------GSQIV--TP-EETKFFLLHLSLMRDYLELEFGKL 338
E + + K G ++V TP + K+ L++ ++R+YL+ + L
Sbjct: 250 EMITPPGQQEKCYLCGQVGHLAAECRGIEVVDDTPIHKKKYQFLNIWVLREYLQYDLEIL 309
Query: 339 KEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDG 398
P F + E ++DD+V + F +GNDF+P++P L I GA+ LL VY+ + G
Sbjct: 310 NPP----FEINFERLLDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFSAMGG 365
Query: 399 YINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDP 458
Y+ + G + L R E F+ +A ++ + F+++ Q LE K +E S+E
Sbjct: 366 YLTDAGEVLLDRVEHFIESVAVYEDQIFQKRTRIQQALENNEEMKLRT--KREASEEPRA 423
Query: 459 DLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDY 518
+ +K L Y+E YY+++ + L
Sbjct: 424 PVEDKVK-------------LGEPGYKERYYTEK---------------------FNLSN 449
Query: 519 AKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEM 578
+ ++V ++ Y+ + W YYY G SW WYYP HYAP+ SD+KD L + + +
Sbjct: 450 PEEIDKVRKEIVMKYVEGLCWVCRYYYQGVCSWQWYYPFHYAPFASDLKDLVDLEITFFL 509
Query: 579 GEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVV 638
GEPF PF QL+ LPAAS LPE Y+ LMT ++SPIL++YP +F D+NGK+ W+ V
Sbjct: 510 GEPFKPFDQLMGTLPAASASSLPENYRKLMTDQSSPILDFYPSDFEIDMNGKRYAWQGVA 569
Query: 639 LIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTAL 686
+PFIDE KL+ +E LT EE+ RN L+Y ++ L T +
Sbjct: 570 KLPFIDEEKLLAETKKLEVTLTVEEQVRNSVMFDLLYVHAVHPLATQI 617
Score = 115 bits (287), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 78/119 (65%), Gaps = 18/119 (15%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE----------YQIP-----EFDNLYLDMNGIIHNCS 44
MGVP F+R++++RYP + +VV E P EFDNLYLDMNGIIH C
Sbjct: 1 MGVPAFYRWLADRYPLAVMDVVEEEPSEGGAEIDVSRPNPNGMEFDNLYLDMNGIIHPCF 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFR 103
HP D P T +F+ IF YI+ LF +++P++L +MAIDGVAPRAKMNQQR RRFR
Sbjct: 61 HP-DGKPA-PTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 117
>gi|183233323|ref|XP_001913842.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|169801637|gb|EDS89385.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 869
Score = 355 bits (911), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 238/710 (33%), Positives = 362/710 (50%), Gaps = 119/710 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++ +R+P +++ + Q P Y D+N PN N +
Sbjct: 1 MGVPSFFRWLKQRFP---KIIVDCQ-PSSQEKYGDLN-------EPNANGVEY------- 42
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F++ ++G+ Q R + E +E
Sbjct: 43 ------------------DNFYIDMNGLIHPCFHPQDR-------QSPETIEDMM----- 72
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLE-QKAKEK 179
+ + D+I + P+KL ++A+DGVAPRAKMNQQR RRF+SAK+AE E ++A++
Sbjct: 73 -VLLTRYLDYI-IDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFKSAKDAENAELRQAEDN 130
Query: 180 GERL-------PTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWK 232
+RL P K DSNCITPGT FM + + L+ ++K +++ W
Sbjct: 131 KKRLMNGLPEVPYIKPLDSNCITPGTEFMSVVSKTLKRYIKERMSQSSYWNK-------- 182
Query: 233 DVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFS 292
+ VILS PGEGEHKIMD+IR K PDYNPN+ HC+YGLDADLIML L THE +FS
Sbjct: 183 -LVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDADLIMLSLATHERFFS 241
Query: 293 LLREEVKFNTKSNKGGSQIVTPEETK--------------FFLLHLSLMRDYLELEFGKL 338
++RE+V F + + P++ + F LH ++R YL++ L
Sbjct: 242 IVREKVFFEDDRCYICNGVHPPDKCQRRKEVGAMDTIIKPFQFLHCHILRGYLQIT---L 298
Query: 339 KEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDG 398
K G F E +DD++ FL+GNDF+P++P L I +GA+ LL KVY+E LP G
Sbjct: 299 KVEG-----FEFERCVDDFIFFCFLVGNDFLPHIPSLDIRDGAVDLLMKVYREFLPH-GG 352
Query: 399 YINEGGYLNLKRFEKFLTKL-----ASFDFEQFREKYADIQYLEGKMGK---------KF 444
YI E G LN+ + FL ++ A + + +EK + + +M + K
Sbjct: 353 YITESGSLNVTNAKNFLQEVGKEEPAILEKKCQKEKMNAKKNFDNQMKQLEMRKATIYKI 412
Query: 445 SDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEF 504
+ + E E+ P+ +K E + +E + ++ T +
Sbjct: 413 NTLKSTEGMNELTPEQQEQLKT--------QEAEIKLIEQKENRLKERLKKAETKDLLKM 464
Query: 505 GQ--HKTDYY--HYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYA 560
G+ + YY +K+D K T ++ RD Y + W L YYY GC SW WYYP+ YA
Sbjct: 465 GEVGYTQRYYSVKFKIDPKKDTQKI-RDIVHSYFEGMNWVLGYYYKGCQSWDWYYPYLYA 523
Query: 561 PYISDIKDF--SHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEY 618
P+ D+ ++ + KY+ PF PF+QL++VLP SK LP+ + +LM + SPI E+
Sbjct: 524 PFAEDMGEYVDDNFEFKYKKSIPFRPFEQLMSVLPPRSKSCLPQQFHDLMKSKGSPISEF 583
Query: 619 YPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
YP+ F D NG+K D++A+V++ FID+ KL+ + +E L + + RNR
Sbjct: 584 YPDTFKLDFNGEKVDYKAIVVLTFIDQEKLLHYVKPIEKKLKGDAKRRNR 633
>gi|397607914|gb|EJK59848.1| hypothetical protein THAOC_19883 [Thalassiosira oceanica]
Length = 773
Score = 354 bits (909), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 220/607 (36%), Positives = 317/607 (52%), Gaps = 91/607 (14%)
Query: 134 KFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNC 193
K P+K+ ++A+DGVAPRAKMNQQR RRFRS+KEAE L + LP FDSNC
Sbjct: 134 KIVQPRKVLYLAVDGVAPRAKMNQQRSRRFRSSKEAEKLAATILARDGSLPERDAFDSNC 193
Query: 194 ITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMD 253
ITPGT FM +L +R +++ K TD WK+ V++SG + PGEGEHK+MD
Sbjct: 194 ITPGTDFMLKLGLAMRKWIEYKQQTDPAWKNGCD--------VVVSGPDVPGEGEHKVMD 245
Query: 254 YIRYMKS---------KPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF---- 300
+IR K+ P + P++ H LYGLDADLIMLGL THEP+F LLRE++
Sbjct: 246 FIRDTKALYDPDDLEKSPHWQPSLTHVLYGLDADLIMLGLATHEPHFLLLREKMSVVMAG 305
Query: 301 -NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVL 359
++ ++ F LL LS +R+ +++F K + L + + +IDD++
Sbjct: 306 RGRHKHRKKKDMLEYTRNDFDLLELSSLREMFKIQFRKFADSDRLKVQYDVCRVIDDFIF 365
Query: 360 MGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
M +GNDF+P++P L I NGAL L+ Y ++LP GY+ + G ++ R E+F LA
Sbjct: 366 MCMFVGNDFLPHVPHLEIDNGALSLMLNNYIDLLPEWGGYLTDKGKIHPARLEQFFYNLA 425
Query: 420 SFDFEQF-REKYADIQ--YLEGKMGKKFSDVFHKEK---------SKEMDPDLAALIKAT 467
F+ E F R Y + + + G ++ + F+ E +KE + L +++
Sbjct: 426 VFEEEHFRRRAYEENEPGWGLGTENEQDDEDFYGEWYGGTPTPLVAKEANDGL--VVETN 483
Query: 468 DDDYDDGTEE--------------VLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYH 513
D D G E +++ + D +R EF YY
Sbjct: 484 RIDIDGGGESESQAETTAPDTAPKTKVEKKFKKLHPRDASRSYR-----EF------YYE 532
Query: 514 YKLDYAK-VTN--EVLRDQ---AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
KL + VTN E RD+ A Y+ + WNL+YY++GC SWSW++PH YAP +D+
Sbjct: 533 SKLGISPLVTNRAEAQRDRRAIARDYLEGLHWNLNYYHSGCCSWSWFFPHLYAPLSTDMV 592
Query: 568 DFSHL---------------NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLEN 612
+ S K+ EPF P QLL+VLP S LLP LMT +
Sbjct: 593 NLSEFYGDEDISPTDNDGFREFKFGNTEPFPPLAQLLSVLPPQSASLLPPSLGELMTEPS 652
Query: 613 SPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV---------EHLLTDEE 663
SP+ +YP +F +D NGK+Q WEA+V IPFID +L+ ++ + LLT+ E
Sbjct: 653 SPLAPFYPNDFDSDPNGKRQPWEAIVKIPFIDGDQLLDVVNGILEADEKPLTGELLTNAE 712
Query: 664 RSRNRHG 670
R RN G
Sbjct: 713 RRRNMKG 719
Score = 138 bits (347), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 96/154 (62%), Gaps = 6/154 (3%)
Query: 1 MGVPKFFRYISERYPCL--SEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEK 58
MG+PK FR+++++YP + + IP DN YLDMNGIIH C+H N+ D + E
Sbjct: 60 MGIPKMFRWLTDQYPNILNRRLGSATSIPHVDNFYLDMNGIIHPCTHGNNEDEITILDET 119
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
++F+ IF Y++ L++++QP+K+ ++A+DGVAPRAKMNQQR RRFRS+KEAE L +
Sbjct: 120 EMFKKIFGYVDRLYKIVQPRKVLYLAVDGVAPRAKMNQQRSRRFRSSKEAEKLAATILAR 179
Query: 119 GERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPR 152
LP FD C FM G+A R
Sbjct: 180 DGSLPERDAFD----SNCITPGTDFMLKLGLAMR 209
>gi|449709403|gb|EMD48677.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 869
Score = 353 bits (907), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 238/710 (33%), Positives = 361/710 (50%), Gaps = 119/710 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++ +R+P +++ + Q P Y D+N PN N +
Sbjct: 1 MGVPSFFRWLKQRFP---KIIVDCQ-PSSQEKYGDLN-------EPNANGVEY------- 42
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F++ ++G+ Q R + E +E
Sbjct: 43 ------------------DNFYIDMNGLIHPCFHPQDR-------QSPETIEDMM----- 72
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLE-QKAKEK 179
+ + D+I + P+KL ++A+DGVAPRAKMNQQR RRF+SAK+AE E ++A++
Sbjct: 73 -VLLTRYLDYI-IDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFKSAKDAENAELRQAEDN 130
Query: 180 GERL-------PTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWK 232
+RL P K DSNCITPGT FM + + L+ ++K +++ W
Sbjct: 131 KKRLMNGLPEVPYIKPLDSNCITPGTEFMSVVSKTLKRYIKERMSQSSYWNK-------- 182
Query: 233 DVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFS 292
+ VILS PGEGEHKIMD+IR K PDYNPN+ HC+YGLDADLIML L THE +FS
Sbjct: 183 -LVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDADLIMLSLATHERFFS 241
Query: 293 LLREEVKFNTKSNKGGSQIVTPEETK--------------FFLLHLSLMRDYLELEFGKL 338
++RE+V F + + P++ + F LH ++R YL++ L
Sbjct: 242 IVREKVFFEDDRCYICNGVHPPDKCQRRKEVGAMDTIIKPFQFLHCHILRGYLQIT---L 298
Query: 339 KEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDG 398
K G F E +DD++ FL+GNDF+P++P L I +GA+ LL KVY+E LP G
Sbjct: 299 KVEG-----FEFERCVDDFIFFCFLVGNDFLPHIPSLDIRDGAVDLLMKVYREFLPH-GG 352
Query: 399 YINEGGYLNLKRFEKFLTKL-----ASFDFEQFREKYADIQYLEGKMGK---------KF 444
YI E G LN+ + FL ++ A + + +EK + + +M + K
Sbjct: 353 YITESGSLNVTNAKNFLQEVGKEEPAILEKKCQKEKMNAKKNFDNQMKQLEMRKATIYKI 412
Query: 445 SDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEF 504
+ + E E+ P+ +K E + +E + ++ T +
Sbjct: 413 NTLKSTEGMNELTPEQQEQLKT--------QEAEIKLIEQKENRLKERLKKAETKDLLKM 464
Query: 505 GQ--HKTDYY--HYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYA 560
G+ + YY +K+D K T ++ RD Y + W L YYY GC SW WYYP+ YA
Sbjct: 465 GEVGYTQRYYSVKFKIDPKKDTQKI-RDIVHSYFEGMNWVLGYYYKGCQSWDWYYPYLYA 523
Query: 561 PYISDIKDF--SHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEY 618
P+ D+ ++ + KY+ PF PF+QL++VLP SK LP + +LM + SPI E+
Sbjct: 524 PFAEDMGEYVDDNFEFKYKKSIPFRPFEQLMSVLPPRSKSCLPYQFHDLMKSKGSPISEF 583
Query: 619 YPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
YP+ F D NG+K D++A+V++ FID+ KL+ + +E L + + RNR
Sbjct: 584 YPDTFKLDFNGEKVDYKAIVVLTFIDQEKLLHYVKPIEKKLKGDAKRRNR 633
>gi|164424738|ref|XP_960925.2| hypothetical protein NCU06678 [Neurospora crassa OR74A]
gi|157070639|gb|EAA31689.2| hypothetical protein NCU06678 [Neurospora crassa OR74A]
Length = 1415
Score = 353 bits (907), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 186/406 (45%), Positives = 248/406 (61%), Gaps = 76/406 (18%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MNGIIHNC+H + +D + FRM + + F+AI
Sbjct: 1 MNGIIHNCTHKDTSD-------------------VQFRMTEEE--MFIAI---------- 29
Query: 96 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRA 153
F++I F PKKLFFMAIDGVAPRA
Sbjct: 30 --------------------------------FNYIEHLFGKIKPKKLFFMAIDGVAPRA 57
Query: 154 KMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVK 213
KMNQQR RRFR+A + E KA +G+ LP E+ FDSNCITPGT FM +L QQLRYF+
Sbjct: 58 KMNQQRARRFRTALDNEKARDKAIREGKELPKEEPFDSNCITPGTEFMAKLSQQLRYFIH 117
Query: 214 LKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLY 273
K++ D+ W+ ++LSGHE PGEGEHKIM+YIR +++ DY+ N+RHCLY
Sbjct: 118 KKVSEDRDWQQP---------EIVLSGHEVPGEGEHKIMEYIRNARAQLDYDANVRHCLY 168
Query: 274 GLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLEL 333
GLDADLIMLGL +H+P+F LLREEV F +K ++ + EE F+L+HL ++R+YLEL
Sbjct: 169 GLDADLIMLGLLSHDPHFCLLREEVTFGRGPSKHKAKGL--EEQNFYLMHLCIVREYLEL 226
Query: 334 EFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVL 393
EF LK+PG +SFPF +E +IDD++LM F +GNDF+PNLP LHI GAL L++++Y+E+L
Sbjct: 227 EFQDLKKPGAMSFPFDMEKVIDDFILMAFFVGNDFLPNLPRLHINEGALSLMFRIYKEIL 286
Query: 394 PTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGK 439
P DGYINEGG +NL+R L +L ++ F ++ D +L K
Sbjct: 287 PRGDGYINEGGKVNLQRLGLLLEELGKEEYRFFEHEHEDQSWLRAK 332
Score = 337 bits (863), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 250/795 (31%), Positives = 391/795 (49%), Gaps = 53/795 (6%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTN--EVLRDQAECYIRAIQWNLHYYYNG 547
+D + +F + K YY K + N + LR E Y++ +QW L+YYY G
Sbjct: 453 ADSKAAMEVKYQQKFQEWKDKYYAEKFEDWTPENKEDELRKLTENYVQGLQWVLYYYYRG 512
Query: 548 CVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNL 607
SW W+Y +HYAP ISD+ +L ++MG+PF P++QL+ VLP SK+++P Y +L
Sbjct: 513 IASWPWFYRYHYAPLISDVMKGLKADLNFKMGQPFKPYEQLMGVLPDRSKKIVPTAYWDL 572
Query: 608 MTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
MT NSPI+++YP +F D+NGKK DWEAVV IPFIDE +L+ AM LL+D E+SRN
Sbjct: 573 MTNPNSPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRLLAAMGPKNELLSDVEKSRN 632
Query: 668 RHGPMLVYTYS---NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDV 724
G L +TYS + ++L FP I H +E D V + R GL
Sbjct: 633 DFGVALKFTYSDSVDFEYPSSLV-GIFPPIPHCHCIENIF--DLPPVEGLEYRVGLTDGA 689
Query: 725 NL-KLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILG 783
L + + FP+L + +T + V VFQ SRN+S+++ + + + A + LG
Sbjct: 690 LLNESALAGFPSLATLPYTASLGYHGVNVFQSESRNQSMVVNILDTEKRTNVEEAKRKLG 749
Query: 784 KTIFINYPHLIEIRVQAVATK--DSRISFDKNSGPVFER--AAKDMQDAFQLSKKSITDG 839
K F+ YP L E ++ V+ + D ++ D SG V R + +D++ + + + I +
Sbjct: 750 KRCFVGYPFLQEAKIVGVSDELFDYHLAED-GSGQVVSRNHSTRDIEQWGKTAHR-IENF 807
Query: 840 YYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQA 898
Y +LG+ IG E LV+ + + G ++ I T YA Q V +
Sbjct: 808 YSKRLGILIGQVESLVHVHML--KGLIKTDEGATIKEYGPIPGMETDYAAQIIVDEVVNE 865
Query: 899 RESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLS 955
E + ++E F F L +YG + + L+ ++EPD +
Sbjct: 866 DERFIERAALPLEEEFPIKSVGFFLGEFNYGR-PVEVEGYSNNKLVVWLAALKEREPDFA 924
Query: 956 DLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSR 1015
+ L +YLPSY VA L + L LS+ T S +I T G R N+GLN+KF
Sbjct: 925 RQIILDAQRDNHYLPSYMVAKDLGLHSLALSKITSSYYI---TTLGGLRVNLGLNLKFEG 981
Query: 1016 KNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ 1075
K ++V+G++R+ ET W ++ T++ YM +FP+ F +K H S D++P
Sbjct: 982 KKQKVLGYSRKSETG--WEFSMAARTMLVEYMTKFPDFFAAVKQHPSSAELTETDLWPEP 1039
Query: 1076 --GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCE----KVEKQITL 1129
RV +I +WLK ++ E P A +D+ VV + D + +
Sbjct: 1040 AVASARVKEIGAWLKTLKTSQMERVPLDAEQLDSDVVMRLAAEADRLQLGQLAAANKKMP 1099
Query: 1130 FVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDA 1189
V N L P+ +L + F L DRVV + + VP+ YRGT++GI + T+
Sbjct: 1100 NVPRNALLRPRDAEHRLG---NQHFSLGDRVVYVAEVGKVPIAYRGTVVGISRVPTA--K 1154
Query: 1190 MYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGN--------SNPHVKN 1239
+ DVVFD F G + RC RG +P+ +NL+ + + G+ +NP V
Sbjct: 1155 LLDVVFDVTFMSGTTLGERCPPFRGQTVPSHTCLNLTNRQIVVGSKAAMARQPTNPSVTT 1214
Query: 1240 INV-----MQSRGER 1249
+ MQ+ G++
Sbjct: 1215 LTAHGGYGMQANGKQ 1229
>gi|224131346|ref|XP_002328516.1| predicted protein [Populus trichocarpa]
gi|222838231|gb|EEE76596.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 353 bits (907), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 218/593 (36%), Positives = 312/593 (52%), Gaps = 98/593 (16%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAK----------------EA 169
F +I F P+KL FMAIDGVAPRAKMNQQR RRFR+AK EA
Sbjct: 83 FVYIDHLFALVRPRKLLFMAIDGVAPRAKMNQQRSRRFRAAKDAAQAEAEEERLRKEFEA 142
Query: 170 EVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLW 229
E + KEK E DSN ITPGT FM L L+Y+++ ++ + W++T
Sbjct: 143 EGVLLSVKEKPETR------DSNVITPGTQFMAVLSIALQYYIQSRLNHNPGWQNT---- 192
Query: 230 VWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEP 289
VILS PGEGEHKIM YIR ++ P +N N RHCLYGLDADLIML L THE
Sbjct: 193 -----KVILSDANVPGEGEHKIMSYIRLQRNIPGFNSNTRHCLYGLDADLIMLSLATHEV 247
Query: 290 YFSLLREEVKFNTKSNK----GGSQIVTPE---------------------ETKFFLLHL 324
+FS+LRE V F + +K G + + E + K+ L++
Sbjct: 248 HFSILREMVIFPGQQDKCFLCGQAGHLAAECRGKQGDDALDWNVVDDTPIHKKKYQFLNI 307
Query: 325 SLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPL 384
++R+YL+ + P + F E I+DD+V M F +GNDF+P++P L I GA+ L
Sbjct: 308 WVLREYLQYDLDIPNPPFAIDF----EKIVDDFVFMCFFVGNDFLPHMPTLEIREGAINL 363
Query: 385 LYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKF 444
L +Y+ + GY+ G + L + E F+ +A ++ EQ +K A IQ + F
Sbjct: 364 LMHIYRREFSAMGGYLTLAGEVFLDKVEHFIQSVAVYE-EQIFQKRARIQ-------QAF 415
Query: 445 SDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEF 504
+ ++E + DL+ I+A D + L Y+E YY+++
Sbjct: 416 EN--NEEMKHKARRDLSEEIQAPPVD-----KVKLGEPGYKERYYAEK------------ 456
Query: 505 GQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYIS 564
+ L + ++V +D Y+ + W YYY G SW W+YP+HYAP+ S
Sbjct: 457 ---------FDLSNEEEIDKVTKDVVLKYVEGLCWVCRYYYQGVCSWQWFYPYHYAPFAS 507
Query: 565 DIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFA 624
DIKD + + + +GEPF PF QL+ LPAAS LPE Y+ LMT +SPI +++P +F
Sbjct: 508 DIKDLDEMEITFFLGEPFKPFDQLMGTLPAASSNALPEEYRKLMTDPSSPIHQFFPSDFE 567
Query: 625 TDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
D+NGK+ W+ + +PFIDE KL+ +E L +EE+ RN L+Y +
Sbjct: 568 IDMNGKRFAWQGIAKLPFIDERKLLAQTKKLERTLMEEEQVRNSVMRDLLYVH 620
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 76/123 (61%), Gaps = 22/123 (17%)
Query: 1 MGVPKFFRYISERYPC-LSEVVRE--------------YQIP-----EFDNLYLDMNGII 40
MGVP F+R++++RYP + +V+ E P E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVIEEEPQEDSNGNSKPIDVSKPNPNGIEYDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP T +F+ IF YI+ LF +++P+KL FMAIDGVAPRAKMNQQR R
Sbjct: 61 HPCFHPEGKPA--PATYDDVFKSIFVYIDHLFALVRPRKLLFMAIDGVAPRAKMNQQRSR 118
Query: 101 RFR 103
RFR
Sbjct: 119 RFR 121
>gi|134112225|ref|XP_775088.1| hypothetical protein CNBE3620 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257740|gb|EAL20441.1| hypothetical protein CNBE3620 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1473
Score = 353 bits (905), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 168/301 (55%), Positives = 217/301 (72%), Gaps = 15/301 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+FFMAIDGVAPRAKMNQQR RRFR+ K+A +KA++ GE+LP EK FDSN ITPG
Sbjct: 79 PQKVFFMAIDGVAPRAKMNQQRSRRFRAGKDARDQREKAEKNGEKLPDEKAFDSNAITPG 138
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
TPFM RL Q L+Y+V+ +I+ D W+ + VILSGH+ PGEGEHKI ++IR
Sbjct: 139 TPFMARLSQHLKYYVRKRISEDA---------DWRSIRVILSGHDVPGEGEHKIQEFIRL 189
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K++PDYNPN RHCLYGLDADLIMLGL +H+P+F LLREEV F KS Q T
Sbjct: 190 NKAQPDYNPNTRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRKSR----QNTELANT 245
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
FFLLHLSLMR+YL+LEF L+ +SF + +E IIDD++LM +GNDF+P+LPDLHI
Sbjct: 246 NFFLLHLSLMREYLDLEFSSLQTQ--ISFEYDLERIIDDFILMAIFVGNDFLPHLPDLHI 303
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GAL ++ +Y+++LPT+DGYINE G ++L R + L KLA F+ ++F + D +
Sbjct: 304 NEGALERIWGMYKDILPTIDGYINEHGTISLPRLQLLLDKLAEFEVKRFEDDLLDQVHFS 363
Query: 438 G 438
G
Sbjct: 364 G 364
Score = 301 bits (772), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 222/740 (30%), Positives = 370/740 (50%), Gaps = 41/740 (5%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YYH KL+ ++D YI +QW L+YYY G SW W+Y +HY+P I+D+K
Sbjct: 523 KRQYYHDKLEINYNDPAQMQDLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRITDLK 582
Query: 568 DFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDL 627
+ + +++ G+PF PFQQL+ VLP S + +P Y++LM E SPI+++YP F D+
Sbjct: 583 GVADMKFEFDYGKPFTPFQQLMGVLPVDSMDHVPLAYRDLMYEETSPIIDFYPRNFELDM 642
Query: 628 NGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPM---LVYTYSNVNLGT 684
NGKKQDWEAVV IPFID+ +L+KAM A + LT EER RN+ G + VY
Sbjct: 643 NGKKQDWEAVVKIPFIDQNRLLKAMAARDVRLTPEERERNKSGVLSTQFVYDPEIDENYP 702
Query: 685 ALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKHVQFTH 743
+ P FP + +H P + + +L GL + V L + + FP+L +
Sbjct: 703 SSFPGVFPELTRSHCRASP-FNLPVLGGDVQLIFGLVEGVQLGVSALAGFPSLDTLPHNG 761
Query: 744 KIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVA 802
++ V VFQ S+N S++I + K ++P ++A +LG+ F ++P+L E V AV+
Sbjct: 762 TLDYHGVNVFQSDSKNPSMVITIIGKDELPKTSEIARNVLGQRTFHSWPYLQEGIVAAVS 821
Query: 803 TKDSRISFDKNSGPVFERAAKDMQDAFQLSKKS--ITDGYYTKLGVDIGNTEVLVYGQPV 860
+ + + G QDA + +++ + Y + GV IG EVL++ +P+
Sbjct: 822 DDMFKYTL-QQVGKSLRVVHMPHQDAVKWRRQADHVERHYSRRYGVIIGGVEVLLHIRPL 880
Query: 861 ESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKTIDEI---FYPGCQC 917
+ K+ G + + + AYQ AV + E + ++ F G +
Sbjct: 881 KGLKHL--DNGALVKDYETPEKEIVQAYQVAVSQVTFEDERFLERAPPDLKVDFPVGEKV 938
Query: 918 FALSNPHYGSGGCVISTVKEEN---SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTV 974
L + HYG V S V EE S I F+ + E L + + + PS +
Sbjct: 939 LFLGDMHYGLAAQV-SAVNEEAQTLSVILAYFEEETEETLRFMKAVAHRPAGKWWPSPIL 997
Query: 975 ASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWF 1034
+ +L IS L LSR T ++ + +G+K NIGL++KF + +V+G+++R++ + W
Sbjct: 998 SRRLGISALALSRITSTLLV--QLGDGSKT-NIGLSLKFESRGLKVLGYSKRND--RGWE 1052
Query: 1035 YTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQ-IVSWLKEQPHA 1093
++E+ +++ Y K FPEVF L++ D + ++ + V + + WLK++
Sbjct: 1053 FSEKTAQVLEAYKKAFPEVFKHLENRGGDLVKSKELCPTAEDPDTVIKGMKKWLKDEGLN 1112
Query: 1094 KAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKL-YIPKPTLDK----LCP 1148
E A ++A+ ++E D + K+ +K +L +P+ TL K +
Sbjct: 1113 DLESVSLFADQLEAETCQIVEKLADDI--LSKKTFQSIKKKRLDNVPRQTLLKPAQAIYR 1170
Query: 1149 DPDTKFKLFDRVVNIRD--CYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI- 1205
F+ RVV ++D VP G RG ++G+ DV++D F G +
Sbjct: 1171 LQGQVFEPGHRVVMVQDPAAGGVPTGMRGVVVGLGM------RTVDVIWDNGFMGGSTLQ 1224
Query: 1206 -RCSESRGYRMPAQAMINLS 1224
+CS RG +P + +NL+
Sbjct: 1225 GKCSPYRGSTVPFSSCLNLT 1244
Score = 189 bits (479), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/131 (66%), Positives = 105/131 (80%), Gaps = 2/131 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHP--NDNDPHFRITEK 58
MG+PKFFR+ISERYP S+++ IP FDNLYLDMNGIIHNCSHP +NDPHFRITE+
Sbjct: 1 MGIPKFFRWISERYPLTSQLITPNSIPTFDNLYLDMNGIIHNCSHPPSTENDPHFRITEE 60
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
Q+ IF YI+ LF I+P+K+FFMAIDGVAPRAKMNQQR RRFR+ K+A +KA++
Sbjct: 61 QMILAIFAYIDHLFTKIKPQKVFFMAIDGVAPRAKMNQQRSRRFRAGKDARDQREKAEKN 120
Query: 119 GERLPTEKRFD 129
GE+LP EK FD
Sbjct: 121 GEKLPDEKAFD 131
>gi|242070071|ref|XP_002450312.1| hypothetical protein SORBIDRAFT_05g003580 [Sorghum bicolor]
gi|241936155|gb|EES09300.1| hypothetical protein SORBIDRAFT_05g003580 [Sorghum bicolor]
Length = 696
Score = 353 bits (905), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 243/756 (32%), Positives = 358/756 (47%), Gaps = 168/756 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE--------------YQIPEFD--------------NL 32
MGVP F++++ +YP + +E P D NL
Sbjct: 1 MGVPSFYKWLVGKYPNIVVPAKEDDELLAGAGSTSSSSSSPPGDEQTQAAGGPNGVYHNL 60
Query: 33 YLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRA 92
YLDMNGIIH C HP D + T ++F +F YI+ LFR+++P KL ++A+DGVAPRA
Sbjct: 61 YLDMNGIIHPCFHPEDQ-VYPPTTFDEVFAAMFDYIDRLFRIVRPTKLLYLAVDGVAPRA 119
Query: 93 KMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPR 152
KMNQQR RRF++AK+A+ E + K E+ E R V PR
Sbjct: 120 KMNQQRSRRFKAAKDAKEAELEEKLLREKFRAEGR--------------------EVQPR 159
Query: 153 AKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFV 212
T + D N ITPGT FM +L + L Y++
Sbjct: 160 E-------------------------------TNEVSDPNVITPGTEFMEKLSKALEYYI 188
Query: 213 KLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCL 272
+ ++ +D WK + ILS PGEGEHKIM +IR +S Y+PN RHCL
Sbjct: 189 RSRLNSDP---------GWKGIKAILSDSNVPGEGEHKIMSFIRGQRSLESYDPNTRHCL 239
Query: 273 YGLDADLIMLGLCTHEPYFSLLREEV---------------KFNTKSNKGGSQIVTPEET 317
YGLDADLIML L +HE +FS+LRE+V F T+ + + P T
Sbjct: 240 YGLDADLIMLALASHELHFSILREDVLRSTQPENCIPLSKELFKTEDSSRKCRGWFPRMT 299
Query: 318 K------------FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIG 365
+ + L++ ++R+YLEL+ K+ P V + IE +IDD++ + FL G
Sbjct: 300 ETTASRDRSPKKPYQFLNIWVLREYLELDL-KIPNPVVKT---DIERLIDDFIFICFLTG 355
Query: 366 NDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYI--------NEGGYLNLKRFEKFLTK 417
NDFIP++P + I GA+ LL +VY++ + GYI YL + R EKF +
Sbjct: 356 NDFIPHIPSVEIHEGAIDLLLEVYKQAFNKMGGYIVSTEKLKDKHAAYLKVLRLEKFFHE 415
Query: 418 LASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMD-----PDLA-------ALIK 465
L+ + + F ++Y + L+ + ++ ++ + + M+ PDL I
Sbjct: 416 LSLCEEKIFVKRYELRERLQRNLVRRAAEEWKERNYDNMEENPDGPDLTVKSFSTNGGIC 475
Query: 466 ATDDDYDDGTEEVLNY-ANYEEYYYSDED----------------EEWRTNFFSE-FGQH 507
D D T L N ++ + +D W++ FF E FG
Sbjct: 476 TNSQDESDVTANTLELRRNLKDTLRNKQDIVKSGACKHDAIRLGFAGWKSRFFREKFGVE 535
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K++ + K+ N D + Y+ + W L YY+ SWSWYYP +YAP+ SD K
Sbjct: 536 KSN------EVGKLKN----DMVQKYLEGLCWVLRYYFADVPSWSWYYPFYYAPFTSDFK 585
Query: 568 DFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDL 627
S + + +P PF QL+AVLP S LP+ Y+ LM E S I ++YP + D
Sbjct: 586 GLSQFKISFTADKPLRPFDQLMAVLPKESSCALPKCYRELMENEESLIKKFYPSDLQIDT 645
Query: 628 NGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEE 663
+GK+ W+ + ++PFIDE L A VE L +E
Sbjct: 646 HGKRFLWQGIAMLPFIDEKLLTSATKTVEDKLAVKE 681
>gi|58267550|ref|XP_570931.1| Exonuclease II [Cryptococcus neoformans var. neoformans JEC21]
gi|57227165|gb|AAW43624.1| Exonuclease II, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1457
Score = 352 bits (904), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 168/301 (55%), Positives = 217/301 (72%), Gaps = 15/301 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+FFMAIDGVAPRAKMNQQR RRFR+ K+A +KA++ GE+LP EK FDSN ITPG
Sbjct: 79 PQKVFFMAIDGVAPRAKMNQQRSRRFRAGKDARDQREKAEKNGEKLPDEKAFDSNAITPG 138
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
TPFM RL Q L+Y+V+ +I+ D W+ + VILSGH+ PGEGEHKI ++IR
Sbjct: 139 TPFMARLSQHLKYYVRKRISEDA---------DWRSIRVILSGHDVPGEGEHKIQEFIRL 189
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K++PDYNPN RHCLYGLDADLIMLGL +H+P+F LLREEV F KS Q T
Sbjct: 190 NKAQPDYNPNTRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRKSR----QNTELANT 245
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
FFLLHLSLMR+YL+LEF L+ +SF + +E IIDD++LM +GNDF+P+LPDLHI
Sbjct: 246 NFFLLHLSLMREYLDLEFSSLQTQ--ISFEYDLERIIDDFILMAIFVGNDFLPHLPDLHI 303
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GAL ++ +Y+++LPT+DGYINE G ++L R + L KLA F+ ++F + D +
Sbjct: 304 NEGALERIWGMYKDILPTIDGYINEHGTISLPRLQLLLDKLAEFEVKRFEDDLLDQVHFS 363
Query: 438 G 438
G
Sbjct: 364 G 364
Score = 296 bits (758), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 220/737 (29%), Positives = 366/737 (49%), Gaps = 51/737 (6%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YYH KL+ ++D YI +QW L+YYY G SW W+Y +HY+P I+D+K
Sbjct: 523 KRQYYHDKLEINYNDPAQMQDLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRITDLK 582
Query: 568 DFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDL 627
+ + +++ G+PF PFQQL+ VLP S + +P Y++LM E SPI+++YP F D+
Sbjct: 583 GVADMKFEFDYGKPFTPFQQLMGVLPVDSMDHVPLAYRDLMYEETSPIIDFYPRNFELDM 642
Query: 628 NGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPM---LVYTYSNVNLGT 684
NGKKQDWEAVV IPFID+ +L+KAM A + LT EER RN+ G + VY
Sbjct: 643 NGKKQDWEAVVKIPFIDQNRLLKAMAARDVRLTPEERERNKSGVLSTQFVYDPEIDENYP 702
Query: 685 ALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKHVQFTH 743
+ P FP + +H P + + +L GL + V L + + FP+L +
Sbjct: 703 SSFPGVFPELTRSHCRASP-FNLPVLGGDVQLIFGLVEGVQLGVSALAGFPSLDTLPHNG 761
Query: 744 KIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVA 802
++ V VFQ S+N S++I + K ++P ++A +LG+ F ++P+L E V AV+
Sbjct: 762 TLDYHGVNVFQSDSKNPSMVITIIGKDELPKTSEIARNVLGQRTFHSWPYLQEGIVAAVS 821
Query: 803 TKDSRISFDKNSGPVFERAAKDMQDAFQLSKKS--ITDGYYTKLGVDIGNTEVLVYGQPV 860
+ + + G QDA + +++ + Y + GV IG EVL++ +P+
Sbjct: 822 DDMFKYTL-QQVGKSLRVVHMPHQDAVKWRRQADHVERHYSRRYGVIIGGVEVLLHIRPL 880
Query: 861 ESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKTIDEI---FYPGCQC 917
+ K+ G + + + AYQ AV + E + ++ F G +
Sbjct: 881 KGLKHL--DNGALVKDYETPEKEIVQAYQVAVSQVTFEDERFLERAPPDLKVDFPVGEKV 938
Query: 918 FALSNPHYGSGGCVISTVKEEN---SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTV 974
L + HYG V S V EE S I F+ + E L + + + PS +
Sbjct: 939 LFLGDMHYGLAAQV-SAVNEEAQTLSVILAYFEEETEETLRFMKAVAHRPAGKWWPSPIL 997
Query: 975 ASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWF 1034
+ +L IS L LSR T ++ + +G+K NIGL++KF + +V+G+++R++ + W
Sbjct: 998 SRRLGISALALSRITSTLLV--QLGDGSKT-NIGLSLKFESRGLKVLGYSKRND--RGWE 1052
Query: 1035 YTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQ-IVSWLKEQPHA 1093
++E+ +++ Y K FPEVF L++ D + ++ + V + + WLK++
Sbjct: 1053 FSEKTAQVLEAYKKAFPEVFKHLENRGGDLVKSKELCPTAEDPDTVIKGMKKWLKDE--- 1109
Query: 1094 KAEVRPCGAAVVDAKVVSLIEHAVD--TCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPD 1151
+ D + VSL ++ T + ++K+ V L P + +L
Sbjct: 1110 ---------GLNDLESVSLFADQLEAKTFQSIKKKRLDNVPRQTLLKPAQAIYRL---QG 1157
Query: 1152 TKFKLFDRVVNIRD--CYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RC 1207
F+ RVV ++D VP G RG ++G+ DV++D F G + +C
Sbjct: 1158 QVFEPGHRVVMVQDPAAGGVPTGMRGVVVGLGM------RTVDVIWDNGFMGGSTLQGKC 1211
Query: 1208 SESRGYRMPAQAMINLS 1224
S RG +P + +NL+
Sbjct: 1212 SPYRGSTVPFSSCLNLT 1228
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/131 (66%), Positives = 105/131 (80%), Gaps = 2/131 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHP--NDNDPHFRITEK 58
MG+PKFFR+ISERYP S+++ IP FDNLYLDMNGIIHNCSHP +NDPHFRITE+
Sbjct: 1 MGIPKFFRWISERYPLTSQLITPNSIPTFDNLYLDMNGIIHNCSHPPSTENDPHFRITEE 60
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
Q+ IF YI+ LF I+P+K+FFMAIDGVAPRAKMNQQR RRFR+ K+A +KA++
Sbjct: 61 QMILAIFAYIDHLFTKIKPQKVFFMAIDGVAPRAKMNQQRSRRFRAGKDARDQREKAEKN 120
Query: 119 GERLPTEKRFD 129
GE+LP EK FD
Sbjct: 121 GEKLPDEKAFD 131
>gi|405120875|gb|AFR95645.1| exonuclease II Exo2 [Cryptococcus neoformans var. grubii H99]
Length = 1448
Score = 352 bits (904), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/301 (55%), Positives = 218/301 (72%), Gaps = 15/301 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+FFMAIDGVAPRAKMNQQR RRFR+ K+A +KA++ GE+LP EK FDSN ITPG
Sbjct: 68 PQKVFFMAIDGVAPRAKMNQQRSRRFRAGKDARDQREKAEKNGEKLPDEKAFDSNAITPG 127
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
TPFM RL Q L+Y+V+ +I+ D W+++ VILSGH+ PGEGEHKI ++IR
Sbjct: 128 TPFMARLSQHLKYYVRKRISEDA---------DWRNIRVILSGHDVPGEGEHKIQEFIRL 178
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K++PDYNPN RHCLYGLDADLIMLGL +H+P+F LLREEV F KS Q T
Sbjct: 179 NKAQPDYNPNTRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRKSR----QNTELANT 234
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
FFLLHLSLMR+YL+LEF L+ +SF + +E IIDD++LM +GNDF+P+LPDLHI
Sbjct: 235 NFFLLHLSLMREYLDLEFSSLQTQ--ISFEYDLERIIDDFILMAIFVGNDFLPHLPDLHI 292
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GAL ++ +Y+++LPT+DGYINE G ++L R + L KLA F+ ++F + D +
Sbjct: 293 NEGALERIWGMYKDILPTIDGYINEHGTISLPRLQLLLDKLAEFEVKRFEDDLLDQVHFS 352
Query: 438 G 438
G
Sbjct: 353 G 353
Score = 307 bits (786), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 225/744 (30%), Positives = 369/744 (49%), Gaps = 49/744 (6%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YYH KL+ ++D YI +QW L+YYY G SW W+Y +HY+P I+D+K
Sbjct: 512 KRQYYHDKLEINYSDPAQMQDLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRITDLK 571
Query: 568 DFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDL 627
S + +++ G+PF PFQQL+ VLP S + +P Y++LM E SPI+++YP F D+
Sbjct: 572 GVSDMKFEFDYGKPFTPFQQLMGVLPVDSMDHVPLAYRDLMYEETSPIIDFYPRNFELDM 631
Query: 628 NGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPM---LVYTYSNVNLGT 684
NGKKQDWEAVV IPFID+ +L+KAM A + LT EER RN+ G + VY
Sbjct: 632 NGKKQDWEAVVKIPFIDQNRLLKAMAARDIRLTPEERERNKSGVLSTQFVYDPEIDENYP 691
Query: 685 ALAPDYFPAINENHA----VEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKHV 739
+ P FP + +H P+ DD+ +L GL + V L + + FP+L +
Sbjct: 692 SSFPGVFPELTRSHCRASPFNLPVLGDDV-----QLIFGLVEGVQLGVSALAGFPSLDTL 746
Query: 740 QFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRV 798
++ V VFQ S+N S++I + K ++P +VA +LG+ F ++P+L E V
Sbjct: 747 PHNGTLDYHGVNVFQSDSKNPSMVITIVGKDELPKTSEVARNVLGQRTFHSWPYLQEGIV 806
Query: 799 QAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKS--ITDGYYTKLGVDIGNTEVLVY 856
AV+ + + + G DA + +++ + Y + GV IG EVL++
Sbjct: 807 AAVSDDMFKYTL-QQVGKSLRVVHMPHHDAVKWRRQADHVERHYSRRYGVIIGGVEVLLH 865
Query: 857 GQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKTIDEI---FYP 913
+P++ K+ G + + + AYQ AV + E + ++ F
Sbjct: 866 IRPLKGLKHL--DNGALVKDYEAPEKEIVQAYQMAVSQVTFEDERFLERAPPDLKVDFPV 923
Query: 914 GCQCFALSNPHYGSGGCVISTVKEEN---SFIKLSFKVQQEPDLSDLVHLQDDTVYNYLP 970
G + L + HYG V S + EE S I F + E L + + + P
Sbjct: 924 GERVLFLGDMHYGLAAQV-SAINEEAQTLSVILAYFGEETEETLRFMKAVAHRPTGKWWP 982
Query: 971 SYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETT 1030
S + +L IS L LSR T ++ + +G+K NIGL++KF + +V+G+++R++
Sbjct: 983 SPILCRRLGISALALSRITSTLLV--QLGDGSKT-NIGLSLKFESRGLKVLGYSKRND-- 1037
Query: 1031 KKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDV-FPHQGEQRVAQIVSWLKE 1089
+ W ++E+ +++ Y K FPEVF L++ D + ++ + + + WLK+
Sbjct: 1038 RGWEFSEKTAQVLEAYKKAFPEVFKHLENRGGDLVKSKELCPIAEDPDAVIKSMKKWLKD 1097
Query: 1090 QPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKL-YIPKPTLDK--- 1145
+ E A ++A+ +IE D E + K+ +K +L +P+ TL K
Sbjct: 1098 EGLNDLESVSLFADQLEAETCQIIEKLAD--EILSKKTFQSIKKKRLDNVPRQTLLKPSQ 1155
Query: 1146 -LCPDPDTKFKLFDRVVNIRD--CYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHG 1202
+ F+ RVV +RD VP G RG ++G+ D+++D F G
Sbjct: 1156 AIYRLQGQVFEPGHRVVMVRDPAAGGVPTGMRGVVVGLGM------KTVDIIWDNGFMGG 1209
Query: 1203 VKI--RCSESRGYRMPAQAMINLS 1224
+ +CS RG +P + +NL+
Sbjct: 1210 STLQGKCSPYRGSTVPFSSCLNLT 1233
Score = 140 bits (354), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/98 (67%), Positives = 80/98 (81%), Gaps = 2/98 (2%)
Query: 34 LDMNGIIHNCSHP--NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPR 91
LDMNGIIHNCSHP ++NDPHFRITE+Q+ IF YI+ LF I+P+K+FFMAIDGVAPR
Sbjct: 23 LDMNGIIHNCSHPPSSENDPHFRITEEQMILAIFAYIDHLFTKIKPQKVFFMAIDGVAPR 82
Query: 92 AKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
AKMNQQR RRFR+ K+A +KA++ GE+LP EK FD
Sbjct: 83 AKMNQQRSRRFRAGKDARDQREKAEKNGEKLPDEKAFD 120
>gi|389635811|ref|XP_003715558.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae 70-15]
gi|351647891|gb|EHA55751.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae 70-15]
gi|440470232|gb|ELQ39313.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae Y34]
gi|440485056|gb|ELQ65052.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae P131]
Length = 1435
Score = 352 bits (904), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 165/274 (60%), Positives = 208/274 (75%), Gaps = 14/274 (5%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AEV KA +G+ LP E+ FDSNCITPG
Sbjct: 77 PKQLFFMAIDGVAPRAKMNQQRARRFRTALDAEVARDKAVREGQELPKEEPFDSNCITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILSGHETPGEGEHKIMDYIR 256
T FM +L +QL+YFV K++ D W+ C ++LSGHE PGEGEHKIM+YIR
Sbjct: 137 TEFMAKLSEQLKYFVNKKVSEDTEWQG----------CEIVLSGHEVPGEGEHKIMEYIR 186
Query: 257 YMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEE 316
K++PDYN N+RHCLYGLDADLIMLGL +H+P+F LLREEV F +S SQ E
Sbjct: 187 NAKAQPDYNHNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRQSK---SQSKELEH 243
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F+LLHL ++R+YLELEF LK+ G ++FPF +E +IDD++LM F +GNDF+PNLP LH
Sbjct: 244 QNFYLLHLCIVREYLELEFQDLKKDGRMTFPFDMERVIDDFILMAFFVGNDFLPNLPHLH 303
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKR 410
I GAL L++++Y+E+LP DGYINEGG +NL+R
Sbjct: 304 INEGALALMFRLYKEILPKCDGYINEGGRVNLQR 337
Score = 348 bits (893), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 242/750 (32%), Positives = 380/750 (50%), Gaps = 38/750 (5%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNE-VLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAP 561
+F + K YY K ++ T E LR+ AE Y++ +QW L+YYY G SW W+Y HY+P
Sbjct: 507 KFQEWKDKYYSEKFEWTAETKEQGLRELAENYVQGLQWVLYYYYRGIRSWPWFYKFHYSP 566
Query: 562 YISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
ISD+ + ++ + +G+PF P++QL+ VLP SK+++P Y LMT NSPI+++YP
Sbjct: 567 MISDVMKGLNADMNFTLGQPFKPYEQLMGVLPDRSKKIVPTVYWELMTDPNSPIIDFYPR 626
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NV 680
+F D+NGKKQ+WEAVV IPFIDE +L+ M HLL+D E+SRN G L +T+ N+
Sbjct: 627 DFELDMNGKKQEWEAVVKIPFIDEKRLLDGMATKNHLLSDVEKSRNGFGVALKFTHDPNL 686
Query: 681 NLG-TALAPDYFPAINENHAV----EKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPT 735
+ + P FP I V E P Y+H L G +V+ + FP+
Sbjct: 687 DFQYPSSLPGIFPDIPHCRCVMNIFELPPTEGLEYLH--GLTDGALLNVSA---LAGFPS 741
Query: 736 LKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIE 795
L + +T + V VFQQ SRNES+++ ++ + A LG+ + YP L E
Sbjct: 742 LATLPYTASLGFHGVNVFQQESRNESMVVTLSDTEMKTKSSSAVMKLGQRCHVGYPFLTE 801
Query: 796 IRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLV 855
+V V+ + + D N V + F + I + Y +LG+ IG+ E LV
Sbjct: 802 AKVVRVSDELFNYTLDANGKVVQTPHQHKEMEQFHTKSRRIEEFYSKRLGILIGDVESLV 861
Query: 856 YGQPVESRKYFFGP-RGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESLEYKT---IDEI 910
+ VE K G ++ + T YA Q V + E + I+E
Sbjct: 862 H---VEMLKGLIKTEEGATIKEYGEVPGMETDYAPQVIVDEVVNEDERFIERAALPIEEE 918
Query: 911 FYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLP 970
F GC F L + YG V+ K +++S + EPD + + Q + Y+P
Sbjct: 919 FPLGCHAFFLGDYAYGRPLEVVGH-KGNKVDVRVSVLKKPEPDFAKNIIFQAERNNRYVP 977
Query: 971 SYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETT 1030
SY VA L + PL LSR T S F+ T +G+ + N+GLN+KF K ++V+G++R+ +
Sbjct: 978 SYAVAKSLDLHPLALSRITASFFVY--TMKGSLKVNLGLNLKFESKKQKVLGYSRK--SG 1033
Query: 1031 KKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ--GEQRVAQIVSWLK 1088
W ++ + L+ YM+ FP++F LK S + D++ + + RV +I +WLK
Sbjct: 1034 SGWEFSPATIGLLAQYMQNFPDLFAGLKRLPSGNEIKDTDIWQDEKVAQARVKEIGAWLK 1093
Query: 1089 EQPHAKAEVRPCGAAVVDAKVVSLIEHAVD----TCEKVEKQITLFVKPNKLYIPKPTLD 1144
+K E P A +D++VV + + D + E + V + L P+
Sbjct: 1094 TIETSKFERVPLDAEQLDSEVVMALAASTDQLNLAAPEFEAKGLNAVPRSALLKPEDAEV 1153
Query: 1145 KLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVK 1204
+L + F L DRVV + VP+ RGT+IGI + T+ + D+VFD F G
Sbjct: 1154 RLG---NQNFALGDRVVYVAASGKVPIAVRGTVIGISRTPTA--KLLDIVFDITFMSGGS 1208
Query: 1205 I--RCSESRGYRMPAQAMINLSYGERLCGN 1232
+ RC RG + + ++NL+ + + G+
Sbjct: 1209 LGERCPAFRGQTVASSTVLNLTNRQVVTGS 1238
Score = 183 bits (465), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 83/129 (64%), Positives = 105/129 (81%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + +D FR++E ++
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDTHDTSFRLSEDEM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF+YIE LF I+PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AEV KA +G+
Sbjct: 61 FIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARRFRTALDAEVARDKAVREGQ 120
Query: 121 RLPTEKRFD 129
LP E+ FD
Sbjct: 121 ELPKEEPFD 129
>gi|399215845|emb|CCF72533.1| unnamed protein product [Babesia microti strain RI]
Length = 803
Score = 352 bits (903), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 234/727 (32%), Positives = 360/727 (49%), Gaps = 151/727 (20%)
Query: 1 MGVPKFFRYISERYPCL---------------SEVVREYQIPEFDNLYLDMNGIIHNCSH 45
MGVP F+R++ R+P + S +DNLYLDMNGI+H C H
Sbjct: 1 MGVPTFYRWLCSRFPKVPKDITNKANTSGEGDSHFTDSLFTERYDNLYLDMNGIVHPCCH 60
Query: 46 PNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 105
P + P E+++F+ IF YI+ L I+PK+L ++A+DGVAPRAKMNQQR RRF++
Sbjct: 61 P-EYLPQ-PSNEEEMFEAIFDYIDRLIETIRPKRLLYLALDGVAPRAKMNQQRSRRFKAV 118
Query: 106 KEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRS 165
E E +++ + D P +++ R
Sbjct: 119 YEREYAQKQLQN-----------------------------DKSTPETNLSKSR------ 143
Query: 166 AKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
+ + Q + +K +DSN ITPGTPFM +L ++ +V ++
Sbjct: 144 ----QNIPQNEQ--------QKVWDSNVITPGTPFMYQLGLEVEEYVSNRLENSD----- 186
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
+W ++ VI+S +PGEGEHKI+++IR + +Y+PN RH ++G+DADLIML L
Sbjct: 187 ----IWHNLTVIISDSNSPGEGEHKIINFIRTQRQSSNYDPNTRHVIHGMDADLIMLALA 242
Query: 286 THEPYFSLLREEVKFNTKSNKGGSQIVTPEET---------------KFFLLHLSLMRDY 330
THEP F +LRE V F ++ I ET + ++ + ++R+Y
Sbjct: 243 THEPNFFILREVVPFKQFNSTTQPTISDTSETVPSLKYSLMLRKSWKQLQIIQIPVLREY 302
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
L F K+ G +E IDD VLM F GNDF+P+LP + I G++ + +YQ
Sbjct: 303 LSYLF---KDCGC-----DLERCIDDLVLMCFFCGNDFLPHLPSMSITLGSIDQMIYLYQ 354
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHK 450
++ PTL GY+ + G +N+ + E F + L + + E L+G
Sbjct: 355 QIFPTLGGYLTDCGKINMPQLEMFTSYLTAVEHETLS--------LKGN----------- 395
Query: 451 EKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNF-FSEFG---- 505
+ A +A + D N N +DE+E +T F++ G
Sbjct: 396 --------NHGATRRAGNAD---------NVTN------NDEEETSKTGMIFTDLGIDVT 432
Query: 506 -----QHKTDYYHYKLDYAK-VTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHY 559
+K YY KLD ++ + A Y++ ++W L YYY G SW+WYYP+HY
Sbjct: 433 LGSPEVYKKSYYIKKLDCSEDDVAKTASAMAGEYVKGMEWVLEYYYQGIPSWNWYYPYHY 492
Query: 560 APYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYY 619
AP+ SD+K F+ N+ +++G PF P QQL++VLP S LPE + +LM E SPI EYY
Sbjct: 493 APFASDLK-FTTQNV-FQLGTPFTPLQQLMSVLPVQSSHCLPEKFADLMRSEVSPIAEYY 550
Query: 620 PEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSN 679
P D NG + ++ V L+PFIDE L+ + +E L+ EE+ RN+ ++ + N
Sbjct: 551 PRTLKLDPNGSRYRYQWVALLPFIDEQLLLATVKPLEEELSKEEKERNKLKSEKIFVHKN 610
Query: 680 VNLGTAL 686
+ + L
Sbjct: 611 MKINRYL 617
>gi|242792196|ref|XP_002481904.1| exonuclease Kem1, putative [Talaromyces stipitatus ATCC 10500]
gi|218718492|gb|EED17912.1| exonuclease Kem1, putative [Talaromyces stipitatus ATCC 10500]
Length = 1417
Score = 352 bits (902), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 247/759 (32%), Positives = 383/759 (50%), Gaps = 59/759 (7%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K YY K + + E Y++ +QW L YYY G VSW WY+ +HYAP
Sbjct: 512 KFQEWKNKYYMEKFGHGLEDEAAMTKLTENYVQGLQWVLFYYYRGVVSWPWYFQYHYAPM 571
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K N+ +++G+PF PFQQL+ VLP SK+++P Y +LMT +SPI+++YP +
Sbjct: 572 ISDVKKGLGANIDFKLGQPFRPFQQLMGVLPDRSKKIVPPAYWDLMTSPDSPIIDFYPRD 631
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVN- 681
F D+NGKK +WEAVV IPFIDE +L+ AM + EHLLT EER RN G L +TYS
Sbjct: 632 FELDMNGKKMEWEAVVKIPFIDEKRLLPAMASREHLLTPEERGRNEFGVTLKFTYSPSIE 691
Query: 682 -LGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQDVNL-KLYVTHFPT 735
+ + P FP I H +E +IY P + GL V L + FPT
Sbjct: 692 FVYPSPLPGIFPDIPRCHCIE------NIYELPTMDGLEHYVGLVDGVKLGAAALAGFPT 745
Query: 736 LKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIE 795
LK + ++ V VFQQ SR ES++I + S ++A LGK +++ YP L E
Sbjct: 746 LKTLPHAGQLAFHGVNVFQQDSRKESMVITLLGPEARSNIELAKAKLGKRVYVGYPFLQE 805
Query: 796 IRVQAVATK---------DSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTK-LG 845
V V+ + + I +S P E+ A+ K +GYY+K LG
Sbjct: 806 ALVDRVSDELFDYVLPEGEQHIVAIPHSPPQIEQWAR---------KSDRIEGYYSKRLG 856
Query: 846 VDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESL-- 902
+ IG E +++ Q ++ + G ++ I T +A Q V ++ E
Sbjct: 857 MIIGPVESVIHVQLLKGLRK--TDDGATIKEFADIPGQETDHALQLIVDSIISEDERFLE 914
Query: 903 -EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHL 960
E I+E F G + F L +YG+ V T E+ + V+ +EP+
Sbjct: 915 REALPIEEEFPEGSKAFFLGEFNYGT--AVQVTSHEDGKITGMMAAVKGKEPEFGKRHVR 972
Query: 961 QDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEV 1020
+ + + Y PS+ +A L ++ L+L++ T S S +R N+GLN+KF + +V
Sbjct: 973 EAEKLSPYTPSFAIARNLHLNALVLAKITSSF----SVTIDGQRANLGLNLKFEARKLKV 1028
Query: 1021 VGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQR 1079
+G++RR ++ W ++ + + LI+ YM +FPE ++ + DIY D +P + +
Sbjct: 1029 LGYSRRGDSG--WEFSNKAIDLIQQYMIKFPEFIAGIQRNPQGDIYEPTDFYPEEIAMSK 1086
Query: 1080 VAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITL----FVKPNK 1135
+ +I +WLK E P A +D+ VV IE D +V+ + V
Sbjct: 1087 MKEIKAWLKSVESKHLEKVPLDAEQLDSDVVKRIELDADRIAQVQSAHEIKRIKGVPRQA 1146
Query: 1136 LYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVF 1195
L P +L + +F L DRVV +++ VPL YRGT++G+ + T DVVF
Sbjct: 1147 LLKPADVEHRLG---NQRFSLGDRVVYVQESGKVPLAYRGTVVGVTR--TPRTVFLDVVF 1201
Query: 1196 DKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGN 1232
D PF G + RCS RG +P +++NL+ + + G+
Sbjct: 1202 DAPFMSGTTLGDRCSPFRGQTVPVFSILNLTDRQLVAGS 1240
Score = 346 bits (887), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 169/302 (55%), Positives = 217/302 (71%), Gaps = 12/302 (3%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKKLFFMA+DGVAPRAKMNQQR RRFRSA +AEV ++KA +G +P E FDSNCITPG
Sbjct: 77 PKKLFFMAVDGVAPRAKMNQQRARRFRSALDAEVAKEKAIAQGIEMPKEDAFDSNCITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL +QL+YF+ KI+ D W+ V ++LSGHE PGEGEHKIM+YIR
Sbjct: 137 TEFMARLTKQLKYFISKKISEDV---------DWQGVDIVLSGHEVPGEGEHKIMEYIRQ 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K++PDY+PN+RHCLYGLDADLIMLGL +H+PYF LLREEV F ++ K ++ E
Sbjct: 188 AKAQPDYDPNVRHCLYGLDADLIMLGLLSHDPYFCLLREEVTFGRQAQKKSKEL---EHQ 244
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F+LLHL ++R+YLELEF +LK S F +E IIDD++LM F +GNDF+PNLP +HI
Sbjct: 245 NFYLLHLCIVREYLELEFQELKAIKDSSIDFDMERIIDDFILMAFFVGNDFLPNLPHMHI 304
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GAL L++ Y+E LP + GYINE G +NL+R L L+ F+F F +Y+D +++
Sbjct: 305 NEGALALMFTKYKEALPKMGGYINEYGTINLQRLGILLDHLSEFEFRFFEAEYSDAKWIR 364
Query: 438 GK 439
K
Sbjct: 365 SK 366
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 104/129 (80%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFDNLY DMNGIIHNC+H + + P R++E Q+
Sbjct: 1 MGVPKFFRWLSERYPSISQLIAENRIPEFDNLYFDMNGIIHNCTHSDSDSPTHRMSEDQM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF+YIE L+ I+PKKLFFMA+DGVAPRAKMNQQR RRFRSA +AEV ++KA +G
Sbjct: 61 FIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRARRFRSALDAEVAKEKAIAQGI 120
Query: 121 RLPTEKRFD 129
+P E FD
Sbjct: 121 EMPKEDAFD 129
>gi|443920066|gb|ELU40060.1| exonuclease Kem1, putative [Rhizoctonia solani AG-1 IA]
Length = 1536
Score = 352 bits (902), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/333 (53%), Positives = 234/333 (70%), Gaps = 20/333 (6%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+KLFFMAIDGVAPRAKMNQQR RRFR+AK+A+ +KA++KGE+LP EK FDSNCITPG
Sbjct: 405 PRKLFFMAIDGVAPRAKMNQQRARRFRTAKDAKEAREKAEKKGEKLPEEKAFDSNCITPG 464
Query: 198 -----TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIM 252
T FM +L +QL+YFV KI+ D W++V V+LSGHE PGEGEHKIM
Sbjct: 465 MHPLGTVFMKKLSEQLKYFVNKKISEDA---------NWREVQVVLSGHEVPGEGEHKIM 515
Query: 253 DYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIV 312
+YIR K++PDY+PN+RHCLYGLDADLIMLGL +H+P+F LLREEVKF + NK +
Sbjct: 516 EYIRLSKAQPDYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVKFGPQKNKSKGSL- 574
Query: 313 TPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
E F+LLH+SL+R+YL+LEF L L F + +E IIDD+VL+ IGNDF+P+L
Sbjct: 575 --ETQSFYLLHISLLREYLDLEFQSLTS--TLPFQYDLERIIDDFVLIAVFIGNDFLPHL 630
Query: 373 PDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
PDLHI AL L+++Y+ VLP GY+NE G ++ R + L +LA+++ + F ++ +D
Sbjct: 631 PDLHIHENALERLFEIYKAVLPNAGGYLNESGEIHRGRLQLILDELATWEVDVFEKETSD 690
Query: 433 IQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIK 465
Q+ +GK K K KSK + DLA I+
Sbjct: 691 SQWYKGKQRKHQQQAAEKSKSKPLS-DLAMKIQ 722
Score = 318 bits (814), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 230/763 (30%), Positives = 381/763 (49%), Gaps = 98/763 (12%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQ-AECYIRAIQWNLHYYYNGCV 549
DE E+ R + + K DYY KL++ + V DQ YI +QW ++YYY G
Sbjct: 816 DEREDDRLK--AALKKWKEDYYKEKLEFKDIEKGV--DQLVYRYIEGLQWVMYYYYRGVA 871
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMT 609
SW W+Y +HYAP ISDIK+ YE+G+PF PF+QL+ VLP AS EL+PE Y+ LM
Sbjct: 872 SWGWFYDYHYAPRISDIKNIELFEFNYELGKPFKPFEQLMGVLPYASHELIPEAYRELMH 931
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
E+SPIL++YPE F D+NGKKQ+WEAVV +PFID+ +L+ +M +EH LT+EE+ RN
Sbjct: 932 SEHSPILDFYPENFDLDMNGKKQEWEAVVKVPFIDQKRLLSSMATLEHRLTEEEKRRNTW 991
Query: 670 GPMLVYTYS-NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN-----KLRKGLCQD 723
G + ++++ +V + +P + P + R D +V P L KGL
Sbjct: 992 GMSIKFSWTKDVKEYPSPSPGFLPILPRCQC------RMDEFVLPTLEGGLDLVKGLRDG 1045
Query: 724 VNLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQI 781
V L + + FP+L+ + + I++ V VF S+N S++I V + +A+++
Sbjct: 1046 VFLGVDALAGFPSLQTLPHSSVIQHHSVNVFNSDSKNRSVVIRVTNTFMGAKAGPIAEKM 1105
Query: 782 LGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAK--------DMQDAFQLSK 833
+GK FI +P L E Q VA D +++ + R AK + ++ +
Sbjct: 1106 IGKRTFIGWPFLTE--AQVVAVSDDLFKYERQT---IGRVAKVVPTPHHGEALSRWKRTA 1160
Query: 834 KSITDGYYTKLGVDIGNTEVLVYGQPVESRKY---------FFGPRGKVTQQRTFIRSTV 884
+ I Y + V+IG+ ++L++ +P++ K + GP + Q ++ ++
Sbjct: 1161 EKIGATYSKRFAVEIGDVDILLHVRPLKGLKRMDDGSLVKDYAGPEAETEQA---VQMSL 1217
Query: 885 TYAYQSAVLNLQQARESLEYKTIDEIFYP-GCQCFALSNPHYGSGGCVISTVKEENSFIK 943
++Q LE + YP G F L YG+ +I V ++ + +
Sbjct: 1218 MEVRSEDPRYIEQPAAPLEQE------YPIGTNVFFLGEHTYGT-PALIKAVADQKASLM 1270
Query: 944 LSFKVQQEPDLSDLVHLQDDTVY-NYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGA 1002
+ + ++ ++ L L + + +YL + ++S L IS L LSR T S+ + T G
Sbjct: 1271 IVYNPEERVEIDKLRALAKENIAGSYLSARQISSALRISGLALSRVTSSVMV---TINGN 1327
Query: 1003 KRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSS 1062
+ N+GL++KF K+ +V+G++R+ + W ++E+ V LI++Y FP +F L
Sbjct: 1328 SKVNLGLSLKFEGKSMKVLGYSRKSD--HGWEFSEKAVQLIQDYKAAFPTIFSGLDRRGG 1385
Query: 1063 DDIYLRDDVFPH-QGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD--- 1118
DDI D+FP+ E + WL + V D + VSL ++
Sbjct: 1386 DDITRASDLFPNGDAENQAKAAKEWLASK------------GVRDLEPVSLFSEQLEKQN 1433
Query: 1119 --TCEKVEKQITL--FVKPNKLY------IPKPTLDKLCPD------PDTKFKLFDRVVN 1162
EK E ++ +P+ + +P+ L L PD + KF L DRVV
Sbjct: 1434 IANIEKYETELNTKRSSEPSSMKRVMVQGVPRQAL--LKPDHAVHRLQNQKFSLGDRVVM 1491
Query: 1163 IRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI 1205
+++ VPL +G ++G++ DVV+D PF +G +
Sbjct: 1492 VQNTGGVPLAAKGVVVGLL------PTFLDVVWDVPFINGTTL 1528
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 71/86 (82%)
Query: 44 SHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFR 103
SHPND D HFR++E QIF IF Y++ LF I+P+KLFFMAIDGVAPRAKMNQQR RRFR
Sbjct: 372 SHPNDGDVHFRLSEDQIFTAIFSYVDHLFGKIKPRKLFFMAIDGVAPRAKMNQQRARRFR 431
Query: 104 SAKEAEVLEQKAKEKGERLPTEKRFD 129
+AK+A+ +KA++KGE+LP EK FD
Sbjct: 432 TAKDAKEAREKAEKKGEKLPEEKAFD 457
>gi|195164006|ref|XP_002022840.1| GL14782 [Drosophila persimilis]
gi|194104863|gb|EDW26906.1| GL14782 [Drosophila persimilis]
Length = 1039
Score = 352 bits (902), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 201/522 (38%), Positives = 296/522 (56%), Gaps = 42/522 (8%)
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
LMGF++GNDFIP+LP LHI + ALPLLYK Y + +L G INE G LNL+R + F+T L
Sbjct: 112 LMGFMVGNDFIPHLPCLHISSNALPLLYKTYIRIYHSLGGNINEHGKLNLQRLQIFMTAL 171
Query: 419 ASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEV 478
+ + EQ++E D++Y G DV SK+ D DL ALI DD T+
Sbjct: 172 SEVELEQYKEHADDLKYANGNTEAFDIDVGEISSSKDYDSDLKALI-------DDSTQ-- 222
Query: 479 LNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYA-KVTNEVLRDQAECYIRAI 537
++ + +F +K +YY K + + + N+++ + Y+ A+
Sbjct: 223 -----LYNDDSDEDLSDEEAGVLKDFQNYKRNYYRNKFNLSSRPPNQLIEELGHHYVTAL 277
Query: 538 QWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASK 597
QW L YYY G SW WYYP HYAP+ISD+ + + + +K+++G PFLPF+QLL VLPAAS
Sbjct: 278 QWILDYYYRGVQSWDWYYPFHYAPFISDLNNIATVQIKFQLGTPFLPFEQLLGVLPAASF 337
Query: 598 ELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEH 657
+LLP Y +LM SP+ E+YP +F +DLNGKK DWEAVVLIPFIDE L+ M A E
Sbjct: 338 KLLPTAYHDLMLKPTSPLAEFYPTDFKSDLNGKKNDWEAVVLIPFIDECLLLSVMRACEA 397
Query: 658 LLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLR 717
L+ ER+RNRHGPM Y YS ++G+ A A+ + E + +I ++ L
Sbjct: 398 HLSTAERARNRHGPMYQYDYSPQDVGSMPALPPLKALQHVNCTEVARWAGEIALN---LP 454
Query: 718 KGLCQDV---NLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIV-QDKVQVPS 773
+C ++ ++ FPT+KH+ F ++ + +VKVF+Q SRN++++++ + + S
Sbjct: 455 HSVCVEMPNAARHVFFPGFPTMKHLAFNFELRHGRVKVFEQVSRNQNMVLMPRRQATEDS 514
Query: 774 LKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFD---KNSGPVFERAAKDMQDAFQ 830
L+ VA + L + + I +PHLI +V VAT+D I D N F+ K +Q+ Q
Sbjct: 515 LEAVAARYLEQVVHIGWPHLIMAKVVKVATRDQCIDKDGRSSNESRRFDAECKALQE--Q 572
Query: 831 LSKK---------------SITDGYYTKLGVDIGNTEVLVYG 857
LS SI + T++G+ N +VLVY
Sbjct: 573 LSAALSCQVLSGPNAHAIPSIVHSFSTRMGIQFDNYDVLVYA 614
Score = 190 bits (482), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 82/105 (78%), Positives = 97/105 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFRYISERYPCLSE+ RE+ IPEFDNLYLDMNGI+HNCSHP+DN+ HF + E+QI
Sbjct: 1 MGVPKFFRYISERYPCLSELAREHSIPEFDNLYLDMNGIVHNCSHPDDNNIHFHLEEQQI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 105
FQDIF+Y++ LF +I+P+KLFF+A+DGVAPRAKMNQQR RRFRSA
Sbjct: 61 FQDIFNYVDKLFYLIKPQKLFFLAVDGVAPRAKMNQQRSRRFRSA 105
Score = 154 bits (389), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 174/360 (48%), Gaps = 38/360 (10%)
Query: 899 RESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSF---------IKLSFKVQ 949
R E K + E C LS P+ + ++ + L +V
Sbjct: 561 RFDAECKALQEQLSAALSCQVLSGPNAHAIPSIVHSFSTRMGIQFDNYDVLVYALCIRVH 620
Query: 950 QEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFII----DSTEEGAKRH 1005
EP+L + Q++ +Y+ ++ V +L+I+ L R TG+ +++ E +H
Sbjct: 621 PEPNLEEARLEQEERDKDYMNTFDVCRQLNINGRALGRLTGTFWVVLGPRREKMENVAKH 680
Query: 1006 NIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFG-FLKDHSSDD 1064
NIGL +KF R+NEE G+ RR +WFY+ + L++ Y ++FPEV F + ++
Sbjct: 681 NIGLQLKFPRQNEERAGYCRR--LNNQWFYSSLALELMQRYCERFPEVVSYFAVSNDRNE 738
Query: 1065 IYLRDDVFPHQ-GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKV 1123
+ D++P G+ + + +W+++QPH K + CG+ V + V L+ AV+ +
Sbjct: 739 YFFEQDIYPDAVGQHHIEDLANWVRQQPHMKVDRISCGSKTVCKETVELLMGAVEELRSM 798
Query: 1124 E-KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI-- 1180
K + L VKP+ L P TL ++ +LFDRVV +R Y VP+G +GT+IG+
Sbjct: 799 PVKDVKLQVKPHLLIKPNVTLPEVYKS-RRPVRLFDRVVIVRTIYMVPVGIKGTVIGVHP 857
Query: 1181 --------VQGETSYDAMYDVVFDKPFP-----HGVKIRCSESRGYRMPAQAMINLSYGE 1227
++ + D +V+FDK P HG+ +E R Y++P A++ + E
Sbjct: 858 VTDPNPVRLECVHAVDTFCEVLFDKAVPNCNDIHGI----AEERVYKIPENALVVICLNE 913
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/29 (86%), Positives = 28/29 (96%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSA 166
P+KLFF+A+DGVAPRAKMNQQR RRFRSA
Sbjct: 77 PQKLFFLAVDGVAPRAKMNQQRSRRFRSA 105
>gi|402082044|gb|EJT77189.1| 5'-3' exoribonuclease 1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1452
Score = 350 bits (897), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 162/271 (59%), Positives = 206/271 (76%), Gaps = 14/271 (5%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE KA +G+ LP E+ FDSNCITPG
Sbjct: 77 PKQLFFMAIDGVAPRAKMNQQRARRFRTALDAEQARDKAISEGKELPKEEPFDSNCITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILSGHETPGEGEHKIMDYIR 256
T FM +L +QL+YFV K++ DK W+ C ++LSGHE PGEGEHKIM+YIR
Sbjct: 137 TAFMAKLSEQLKYFVNKKVSEDKEWQG----------CEIVLSGHEVPGEGEHKIMEYIR 186
Query: 257 YMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEE 316
K++PDYN N+RHCLYGLDADLIMLGL +H+P+F LLREEV F +S ++ E
Sbjct: 187 NAKAQPDYNDNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRQSQAKSKEL---EH 243
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F+LLHL ++R+YLELEF +LK+ G +SFPF +E +IDD++LM F +GNDF+PNLP LH
Sbjct: 244 QNFYLLHLCIVREYLELEFQELKKEGAMSFPFDMERVIDDFILMAFFVGNDFLPNLPHLH 303
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLN 407
I GAL L++K+Y+++LP DGYINEGG +N
Sbjct: 304 INEGALALMFKLYKQILPKCDGYINEGGTVN 334
Score = 323 bits (829), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 245/810 (30%), Positives = 396/810 (48%), Gaps = 75/810 (9%)
Query: 459 DLAALIKATDDDYDDGTEEVLN--YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKL 516
D AA++ + ++ + E + + +++ YYS++ EEW T
Sbjct: 480 DRAAVVDTSPEEAKEAMERLYQQKFQEWKDKYYSEKFEEWST------------------ 521
Query: 517 DYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKY 576
++ E LR E Y++ +QW L+YYY G SW W+Y +HY+P ISD+ + ++ +
Sbjct: 522 --PELKEEGLRQLCENYVQGLQWVLYYYYRGIRSWPWFYKYHYSPMISDVMKGLNADMNF 579
Query: 577 EMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEA 636
++G+PF PF+QL+ VLP SK+++P Y LMT +SPI+++YP +F D+NGKKQDWEA
Sbjct: 580 KLGQPFRPFEQLMGVLPDRSKKIVPTVYWPLMTQADSPIIDFYPRDFVLDMNGKKQDWEA 639
Query: 637 VVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NVNLGTALAPDYFPAIN 695
VV IPFIDE +L+ AM LL D+E++RN G L +TYS +++ + P FP I
Sbjct: 640 VVKIPFIDERRLLDAMATKNDLLADDEKARNGFGVALKFTYSPDLDF---VYPSSFPGIF 696
Query: 696 EN--------HAVEKPLYRDDIYVHPNKLRKGLCQDVNL-KLYVTHFPTLKHVQFTHKIE 746
+ + E P ++H GL L K + FP+L + ++ +
Sbjct: 697 PDLPHCRCVINIFELPPTEGLDFLH------GLTDGAFLNKSALAGFPSLATLPYSATLG 750
Query: 747 NAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDS 806
V VFQQ SRNES+++ + + A LG+ + YP L E V V+ +
Sbjct: 751 FHGVNVFQQESRNESMVVTLSGTEAKTAVTSAKMKLGQRCHVGYPFLQEAMVVRVSDELF 810
Query: 807 RISFDKNSGPVFE--RAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRK 864
D N G V + AK+++ F + I + Y +LG+ I + E +V+ + +
Sbjct: 811 DYVLDAN-GQVIQTPHHAKEIE-YFHSKSRRIEEFYSKRLGILISSVESMVHVHML--KG 866
Query: 865 YFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESLEYKT---IDEIFYPGCQCFAL 920
G ++ + T YA Q V + + K I+E F G F L
Sbjct: 867 LIKTDEGATIKEYGEVPGMETDYAPQVVVDEVVHEDQRFVEKDALPIEEEFPLGSHAFFL 926
Query: 921 SNPHYGSGGCVISTVKEENSF-IKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLS 979
+G VI +N I+++ ++EP+ + V + Y+PSY VA L
Sbjct: 927 GEYAFGRPLEVIG--HNDNRLEIRVAKLKKEEPEFTRKVIFDAERNNRYMPSYAVAKTLD 984
Query: 980 ISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQV 1039
+ PL+LS+ T S FI T G+ + N+GLN+KF K +V+G++R+ ++ W ++
Sbjct: 985 LHPLVLSKITASFFIY--TMGGSIKVNLGLNLKFEGKKMKVLGYSRKSQSG--WEFSPLA 1040
Query: 1040 VTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ--GEQRVAQIVSWLKEQPHAKAEV 1097
+ L+ YM FP++F LK + + D++ + RV +I +WLK K E
Sbjct: 1041 IGLLAQYMTNFPDLFVALKSRPNGNDLQDTDLWKDETTARARVKEIGAWLKSINTNKFEK 1100
Query: 1098 RPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLYIPKPTLDKLCPD------PD 1151
P A +D++VV + + D+ + E T F P+ L L PD +
Sbjct: 1101 VPLDAEQLDSEVVMNLTQSADSLKLHE---TPFEGRALKGTPRSAL--LKPDEAEQRLGN 1155
Query: 1152 TKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSE 1209
F L DRVV VP+ RGT++GI + T+ + DVVFD F G + RC
Sbjct: 1156 QDFALGDRVVYASSSGKVPIAMRGTVVGISRTPTA--KLLDVVFDVTFMSGGTLGERCPP 1213
Query: 1210 SRGYRMPAQAMINLSYGERLCGNSNPHVKN 1239
RG + A ++NL+ + + G+ +N
Sbjct: 1214 FRGQTVAATTVLNLTRRQVVTGSKATLARN 1243
Score = 180 bits (457), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/145 (59%), Positives = 109/145 (75%), Gaps = 4/145 (2%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + +D FR++E+++
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDTHDTSFRLSEEEM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF+YIE LF I+PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AE KA +G+
Sbjct: 61 FIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARRFRTALDAEQARDKAISEGK 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMA 145
LP E+ FD C FMA
Sbjct: 121 ELPKEEPFD----SNCITPGTAFMA 141
>gi|452822189|gb|EME29211.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 571
Score = 350 bits (897), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 212/541 (39%), Positives = 282/541 (52%), Gaps = 79/541 (14%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKKL F+A+DGVAPRAKMNQQR RRFRSAK+AE +A E+GE + + RFDSNCITPG
Sbjct: 75 PKKLLFLAVDGVAPRAKMNQQRSRRFRSAKDAEKALAEAIERGEEIKSSSRFDSNCITPG 134
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM L Q+ + ++ T D W+ +I SG + PGEGEHKIMD+IR
Sbjct: 135 TEFMHVLSQRFKDWISFMTTHDPAWQQGCD--------IIFSGPDVPGEGEHKIMDFIRT 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
++ +HCLYGLDADLIMLGL TH P+FSLLRE+ K + EE
Sbjct: 187 HTEDKEWTER-KHCLYGLDADLIMLGLVTHFPHFSLLREKYVIQKKDGEANKPKFFFEE- 244
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F L L+L+RD L LEF + LSF + +E ++DD+V M +GNDF+PNL
Sbjct: 245 -FHFLQLALLRDMLYLEFKPFGDTE-LSFAYDLERVVDDFVFMCIFVGNDFLPNL----- 297
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGY-LNLKRFEKFLTKLASFDFEQFREKYADIQYL 436
P LD IN G + ++ L ++ + E+ R ++
Sbjct: 298 ----------------PHLD--INTGALNVMFAVYKSLLPQMGGYLTERHRIHPKRTEWF 339
Query: 437 EGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEW 496
++ K F +E +P G E Y+ YYY
Sbjct: 340 LQQVAKAERAYFQYRAVEENEPGFL------------GDE-------YKSYYYQ------ 374
Query: 497 RTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYP 556
S+ G + H +R+ + Y + + L YYY GC SW W+YP
Sbjct: 375 -----SKLGIRMEEEPH-----------KVRELCQKYYEGLHFILQYYYQGCPSWKWFYP 418
Query: 557 HHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPIL 616
YAP SD+ + +++E G PF P QLLAVLP S LPEP +NLM + SP+
Sbjct: 419 SFYAPLASDMVQLEEIRVEFEQGHPFRPLTQLLAVLPPESSSFLPEPLRNLMISDLSPLN 478
Query: 617 EYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHL--LTDEERSRNRHGPMLV 674
EYYP +F DLNGK+ WEA+VLIPFIDE +L+ A+ V+ LTDEER RN G +
Sbjct: 479 EYYPPDFEVDLNGKRNSWEAIVLIPFIDENRLLNALATVDTRTELTDEERCRNEEGKNYI 538
Query: 675 Y 675
+
Sbjct: 539 W 539
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 96/130 (73%), Gaps = 4/130 (3%)
Query: 1 MGVPKFFRYISERYPCLS-EVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MG+PKF+R++SER+P ++ E+ EY EFDN YLDMNGIIH C+H N++ ++
Sbjct: 1 MGIPKFYRWLSERFPVINQELETEY---EFDNFYLDMNGIIHLCTHNNNSLQLVWNNVEE 57
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+F IF Y + L+R+++PKKL F+A+DGVAPRAKMNQQR RRFRSAK+AE +A E+G
Sbjct: 58 MFDSIFEYTDRLYRIVKPKKLLFLAVDGVAPRAKMNQQRSRRFRSAKDAEKALAEAIERG 117
Query: 120 ERLPTEKRFD 129
E + + RFD
Sbjct: 118 EEIKSSSRFD 127
>gi|209878396|ref|XP_002140639.1| XRN 5'-3' exonuclease domain-containing protein [Cryptosporidium
muris RN66]
gi|209556245|gb|EEA06290.1| XRN 5'-3' exonuclease domain-containing protein [Cryptosporidium
muris RN66]
Length = 1610
Score = 349 bits (896), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 240/758 (31%), Positives = 347/758 (45%), Gaps = 189/758 (24%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+ +F+R+ISERYP +N +I N P I
Sbjct: 1 MGISRFYRWISERYP-------------------QINEVIGNGDTP-------------I 28
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQ-----RGRRFRSAKEAEVLEQKA 115
F +++ + ++G+A + N + G E+
Sbjct: 29 FDNLY-----------------LDVNGIAHNSIYNNEMTVSYSGLNLSFGGSPEIWTGIF 71
Query: 116 KEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQK 175
K + T K PKK+ ++A+DGVAPRAKMNQQR RRFRSA++A ++E+
Sbjct: 72 KYISRLVNTVK-----------PKKVVYIAVDGVAPRAKMNQQRSRRFRSARDAALMEEL 120
Query: 176 AKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
A E FDSNCITPGT FM L++QL++FV +I D +W+++
Sbjct: 121 AVRNSEFANKTNTFDSNCITPGTSFMYELNRQLKFFVHYQIQNDP---------IWRNLE 171
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILSG + PGEGEHKIMDYIR +KS+PDYN N RHCLYGLDADLIML L +HEP+FSLLR
Sbjct: 172 VILSGSDIPGEGEHKIMDYIRCIKSQPDYNNNTRHCLYGLDADLIMLSLASHEPHFSLLR 231
Query: 296 EEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYL-------------ELEFGKLKEPG 342
EE+KF I T + KF LH+S++R+YL +L ++E G
Sbjct: 232 EEIKFVPSKVLDNRIIFTKD--KFQFLHISILREYLVRELNPIYSVSKLDLNVRYMEEMG 289
Query: 343 V---------------------------LSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
V L F E +IDD++ +G+++GNDF+P++P
Sbjct: 290 VQDIVSGCKDESITVTTPKLVQSSFNINLDFKMDEERLIDDFIFLGYIVGNDFLPHIP-F 348
Query: 376 HIINGALPLLYKVYQEVLPTLD--------GYINEGGYLNLKRFEKFLTKLASFDFEQFR 427
H ++ L + Y+ L + + + G +N F +FL R
Sbjct: 349 HTVDNGLDRILCSYRNYLASFQQTNFCKAPWLLEDCGRINFCNFLRFLV-------WHTR 401
Query: 428 EKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEY 487
++ + + L S + + KS ++ L K+ D D+ L + +
Sbjct: 402 SEHEEAKKLLNSSDYWVSVIPNNSKSNDI-LGLPKFSKSLSIDKDN-----LRFQWQSKR 455
Query: 488 YYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTN-----------EVLRDQAECYIRA 536
+ E+ WR +F + G +D T+ E L D CY+
Sbjct: 456 PSTLEEMRWRY-YFVKMGIDANQIRDNNIDLLGHTSISESKRDELVFETLEDLVFCYLEG 514
Query: 537 IQWNLHYYYNGCVSWSWYYPHHYAPYISDI------------------------------ 566
+QW +YY+ G SW W+Y + YAPY DI
Sbjct: 515 LQWISYYYFRGTPSWRWFYSYRYAPYACDIAAILNHWLRLGKITRVNKSEMNLSMESDIL 574
Query: 567 ------KDFSHLN---LKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILE 617
KD HLN +Y +G P PF+QL+ VLP+ S LLPEP++ L + SPI++
Sbjct: 575 NIEKMYKDGIHLNNMVFQYILGTPLQPFEQLMGVLPSRSSNLLPEPFRRLFMNKKSPIID 634
Query: 618 YYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
YYP +F D+ G K W V LIPFIDE L+K++ V
Sbjct: 635 YYPSQFDIDMEGIKVPWGGVTLIPFIDEELLLKSISYV 672
>gi|189209730|ref|XP_001941197.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977290|gb|EDU43916.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1391
Score = 349 bits (895), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 249/755 (32%), Positives = 384/755 (50%), Gaps = 42/755 (5%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
D E + + +F K DYY K ++ + E LR E Y++ +QW L+YYY G S
Sbjct: 460 DAQSEMQKKYDEKFEAWKNDYYKSKFEWDRSNEEELRKLTENYVQGLQWVLYYYYRGVAS 519
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
W WYY +HY+P ISD+K ++ +++G+PF PFQQL+ VLP SK ++P+ Y LMT
Sbjct: 520 WPWYYQYHYSPMISDVKRGLKADINFKLGQPFKPFQQLMGVLPDRSKSIVPKAYWPLMTN 579
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
E+SPI+++YP +F D+NGKKQDWEAVV IPFI E +L+KAM E LT +E++RN G
Sbjct: 580 EDSPIIDFYPRDFTLDMNGKKQDWEAVVKIPFIQEDRLLKAMATKEQDLTPDEKARNSFG 639
Query: 671 PMLVYTYS---NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQD 723
L +TY+ + ++L P FP + +E +I+ P + GL
Sbjct: 640 VSLKFTYAKDLDFIYQSSL-PGVFPDLPHCKCIE------NIFDLPTMDGLEYYIGLMDG 692
Query: 724 VNLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQIL 782
V L + FP+LK + F K+E A V VF Q SRNES++I + A L
Sbjct: 693 VKLGADALAGFPSLKVLPFHGKLEFAGVNVFNQDSRNESMVITLLDTEPRQPVSHAIGKL 752
Query: 783 GKTIFINYPHLIEIRVQAVATK--DSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGY 840
GK + + YP L E +V V+ + D + D S PV ++ + I Y
Sbjct: 753 GKAVHVGYPFLHEAKVVKVSDELFDYVLPEDGVSAPVSIPHGPQEISNWKKTANRIESQY 812
Query: 841 YTKLGVDIGNTEVLVYGQPVES-RKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQAR 899
+LG++IG E LV+ + ++ RK G K + ++ V YA QS V + A
Sbjct: 813 SKRLGINIGEIESLVHVEMLKGLRKTDEGATIKEYGEVAGLQ--VEYATQSVVDEVVSAD 870
Query: 900 ESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSD 956
+ K I+E F G + F L + YG V+ + + + K + EP+
Sbjct: 871 QRFLEKAALPIEEEFPEGARAFYLGDYAYGRPLQVMGHADNKATIMVAKLK-KPEPNFGR 929
Query: 957 LVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRK 1016
V + Y+PSY VA +L++ PL LS+ T S + S + N+KF K
Sbjct: 930 EVVSMAERSTPYVPSYVVARQLNMPPLALSKLTSSFNVTSSGLKLNLGL----NLKFEAK 985
Query: 1017 NEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ- 1075
+V+G++R+ + W Y+++ + L+ YM +FPE + ++ + D + D +P +
Sbjct: 986 KLKVLGYSRK--SPNGWEYSQKAMDLLAQYMIKFPEFVAAIINNPTGDGWEDTDFYPAEI 1043
Query: 1076 GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDT----CEKVEKQITLFV 1131
+Q+V +I +WLKE E P A +D+ V LIE A D ++VE + V
Sbjct: 1044 AKQKVKEIGAWLKEVQTKSFEKVPLDAEQLDSDTVKLIEQAADANFHLTQEVEPKTVSKV 1103
Query: 1132 KPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMY 1191
L P +L F + DR+V ++D VP+G GT++G + T+ +
Sbjct: 1104 PRVALLKPSDAEQRLG---HQNFSIGDRIVYVQDSGRVPIGSSGTVVG--KTRTARVLLL 1158
Query: 1192 DVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
DVVFD F G + RCS RG +PA A++N++
Sbjct: 1159 DVVFDATFMSGTSLGDRCSPFRGSTVPATAVLNMT 1193
Score = 344 bits (883), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 173/314 (55%), Positives = 227/314 (72%), Gaps = 15/314 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK+LFFMAIDGVAPRAKMNQQR RRFR+A + E +KA +G +PTE+ FDSNCITPG
Sbjct: 42 PKQLFFMAIDGVAPRAKMNQQRARRFRTALDTEKAREKAIREGVEMPTEEAFDSNCITPG 101
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L QQL+YF+ K++ D W+ V V+LSGHE PGEGEHK+M+YIR
Sbjct: 102 TAFMAKLTQQLKYFINKKVSEDI---------DWQGVEVVLSGHEVPGEGEHKVMEYIRQ 152
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K++P Y+PN RHCLYGLDADLIMLGL +H+P+FSLLREEV F +S ++ E
Sbjct: 153 AKAQPGYDPNRRHCLYGLDADLIMLGLLSHDPHFSLLREEVTFGRQSQTKSKEL---EHQ 209
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F+L+HL ++R+YLELEF +L+EPG LSFPF +E +IDD++LM F +GNDF+PNLP LHI
Sbjct: 210 NFYLMHLCIVREYLELEFQELEEPGALSFPFDMERVIDDFILMAFFVGNDFLPNLPHLHI 269
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GAL L++ VY+ VLP GYINE G +N++R L +LA+ ++ F + +D + +
Sbjct: 270 NEGALALMFNVYKTVLPKGKGYINEEGVINMERLAILLDELANIEYRHFESENSDAAWFK 329
Query: 438 GK-MGKKFSDVFHK 450
GK +GK+ DV K
Sbjct: 330 GKSLGKE--DVMKK 341
>gi|440792617|gb|ELR13826.1| exoribonuclease, putative [Acanthamoeba castellanii str. Neff]
Length = 1110
Score = 348 bits (892), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 212/620 (34%), Positives = 308/620 (49%), Gaps = 101/620 (16%)
Query: 155 MNQQRGRRFRS-------AKEAEVLEQKAKEKGERLPTEK---RFDSNCITPGTPFMCRL 204
MNQQR RRF++ A++ + Q+ G+ +P ++ FDSN ITPGTPFM ++
Sbjct: 1 MNQQRSRRFKAIKESKEKAEKEAEIVQEMIRMGKEIPPKEDKPHFDSNTITPGTPFMAKV 60
Query: 205 HQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDY 264
Q L+Y++K ++ TD WK + VILS PGEGEHKIMDYIRY +S+P+Y
Sbjct: 61 AQSLQYYIKERLLTDP---------GWKGIKVILSDASVPGEGEHKIMDYIRYQRSQPEY 111
Query: 265 NPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV-------------------KFNTKSN 305
PN H LYGLDADLIML L THEP+F +LRE V K+
Sbjct: 112 EPNTSHVLYGLDADLIMLALATHEPHFFILREIVMQANENNCFICGQPGHLASDCQGKAK 171
Query: 306 KGGSQIVTPEETK--FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFL 363
+ G+ T + F L++S++R+YL + K + L F F +E IIDD+V M F
Sbjct: 172 EKGNDTDTKAAIRKPFQFLYVSVLREYLTRDL-KPSQAQQLPFEFDLERIIDDFVFMCFF 230
Query: 364 IGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASF-- 421
+GNDF+P+LP L I A+ +L ++Y+ +LPTL GY+ G ++L+R + + ++
Sbjct: 231 VGNDFLPHLPTLEIRENAIDMLVRIYKRILPTLGGYLTHDGEVDLRRVKVLMEEVGRLED 290
Query: 422 -----------------------------DFEQFREKYADIQYLEGKMGKKFSDVFHKEK 452
D E F A+ + E G K + F K
Sbjct: 291 SILVERRRKEQRAKENRRRGRERRKRQREDLENF---IANPKDQEANTGGKRAKHFEAGK 347
Query: 453 SKEMDP---DLAALIKA---TDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQ 506
+ + P D AA +K DDD TE + ++T ++
Sbjct: 348 EELITPSNLDAAAALKKQLFGDDDGTTQTETEMVTEKKPPAEIQSASAAYKTAIAAQGKP 407
Query: 507 HKTD--------------------YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYN 546
D YY K D E ++ A Y + W L YYY
Sbjct: 408 RDPDEEEPEIPDDVRLGDPGWKERYYKLKFDVEITDKEFIKKVAMEYTEGLVWVLRYYYQ 467
Query: 547 GCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQN 606
GC SW W+YP HYAP+ D+ + K+E+G+PF PF+QL+ VLPA S LP Q
Sbjct: 468 GCSSWGWFYPFHYAPFADDMTLIDDESPKHELGKPFKPFEQLMGVLPAESGTCLPMKCQV 527
Query: 607 LMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSR 666
+M SPI+++YP +FA D+NGK+ W+AV L+PFIDE +L + M E + EE+ R
Sbjct: 528 MMRHPQSPIIDFYPNDFALDMNGKRWAWQAVALLPFIDENRLKEVMKECEPHFSAEEQER 587
Query: 667 NRHGPMLVYTYSNVNLGTAL 686
N+ G L++ +++ L +
Sbjct: 588 NKLGNHLIFVHASHPLASTF 607
>gi|302416751|ref|XP_003006207.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
gi|261355623|gb|EEY18051.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
Length = 1383
Score = 347 bits (891), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 159/276 (57%), Positives = 208/276 (75%), Gaps = 14/276 (5%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKKLF+MAIDGVAPRAKMNQQR RRFR+A +AE +KA + G +P E FDSNCITPG
Sbjct: 78 PKKLFYMAIDGVAPRAKMNQQRSRRFRTALDAENAREKAIKDGVEMPKEAPFDSNCITPG 137
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILSGHETPGEGEHKIMDYIR 256
T FM +L +QL+YFV K+T D W++ C ++LSGHE PGEGEHKIM+YIR
Sbjct: 138 TEFMAKLSRQLKYFVNKKVTEDADWQE----------CEIVLSGHEVPGEGEHKIMEYIR 187
Query: 257 YMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEE 316
K++PDY+ N+RHCLYGLDADLIMLGL +H+P+F LLREEV F S ++ E
Sbjct: 188 NAKAQPDYDTNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRASKTKSKEL---EH 244
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F+LLHL ++R+YL+LEF +LK+ G+L+FP+ +E +IDD++LMGF IGNDF+P+LP LH
Sbjct: 245 QNFYLLHLCIVREYLDLEFQELKQDGILNFPYDLERVIDDFILMGFFIGNDFLPHLPRLH 304
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFE 412
I GAL ++++Y+ +LP DGYINEGG +NL+R +
Sbjct: 305 INEGALAYMFRIYKSILPECDGYINEGGVINLQRLQ 340
Score = 313 bits (802), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 225/747 (30%), Positives = 382/747 (51%), Gaps = 40/747 (5%)
Query: 508 KTDYYHYKL-DYAKVT-NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISD 565
KT YY K D+A ++ L E Y++ +QW L+YYY G SW W+Y +HY+P SD
Sbjct: 486 KTKYYLQKFEDWAPDNYDKELTALCENYVQGLQWVLYYYYRGIASWPWFYAYHYSPLTSD 545
Query: 566 IKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFAT 625
+ +L +++G+PF P++QL+ VLP SK ++P Y +LMT SPI+++YP +F
Sbjct: 546 VIKGLGADLNFKLGQPFRPYEQLMGVLPDRSKSIVPTVYWDLMTNPKSPIIDFYPRDFEL 605
Query: 626 DLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---NVNL 682
D+NGKK +WEAVV IPFIDE +L+ AM V L+D+E+SRN+ G L +TY+ N
Sbjct: 606 DMNGKKMEWEAVVKIPFIDEKRLLDAMGPVNEELSDDEKSRNQFGVSLKFTYNPEVNFTY 665
Query: 683 GTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQDVNLKL-YVTHFPTLK 737
+++ FP I + VE +I+ P+ + R GL V + + FP++
Sbjct: 666 PSSMV-GVFPDIPQCRCVE------NIFELPSTEGLQYRSGLMDGVKISAEALAGFPSIH 718
Query: 738 HVQFTHKI-ENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEI 796
+ +T ++ E V VFQQ SRN S+II + ++ + +VA + LG+ F+ YP L E
Sbjct: 719 TLPYTGQLMEGYGVNVFQQDSRNPSMIITLSESEITTKAEVAKKKLGQKCFVGYPFLQEA 778
Query: 797 RVQAVATKDSRISFDKNSGPVFERAAKDMQ-DAFQLSKKSITDGYYTKLGVDIGNTEVLV 855
++ V + D V ++ + + F + I + + +LG IG E LV
Sbjct: 779 KIVRVVDELFDYELDHTGTTVVQKNHGPREIEGFSRESQYIENWHAKRLGFTIGEVESLV 838
Query: 856 YGQPVESR-KYFFGPRGKVTQQRTFIRSTVTYAYQSAVLN-LQQARESLEYKT--IDEIF 911
+ ++ K G K + +RS YA Q+ V + Q +E + I+E +
Sbjct: 839 HVHMLKGLIKTEEGALIKEYAENPSMRS--VYASQTIVDEVISQDERFIERASVPIEEEY 896
Query: 912 YPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPS 971
G + F L HYG V+ + + +S +EP+ + + + + + PS
Sbjct: 897 PAGTRAFFLGEFHYGRPLEVLGHANNKAEIV-VSVLQAKEPEYAKPIIQEVNRQNRFTPS 955
Query: 972 YTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTK 1031
Y VA L + PL+LS+ S + +++ G R N+GLN+KF K ++V+G+++++++
Sbjct: 956 YAVAKMLGLHPLILSKILSS-YQVNTV--GGLRVNLGLNLKFDAKKQKVLGYSQKNQS-- 1010
Query: 1032 KWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ--GEQRVAQIVSWLKE 1089
W ++ + L+ Y+ FP+ F ++ + D++P +RV +I WLK
Sbjct: 1011 GWEFSNAAIELLAKYVAAFPDFFVAIQTKAQQSDISDTDIWPDSAVAAKRVKEIGQWLKA 1070
Query: 1090 QPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPN--KLYIPKPTLDKLC 1147
+K E P A +D+ V + A + ++ + T N + + KPT +L
Sbjct: 1071 AETSKFERVPLDAEQLDSVTVMKLAEAGEQAFQISQNTTTKKLNNVPRSALLKPTDAELL 1130
Query: 1148 PDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI-- 1205
+ KF L DRV + VP+ RGT++GI G T+ + DVV+D F G +
Sbjct: 1131 MG-NQKFNLGDRVTYVAATGKVPIASRGTVVGI--GRTATAILLDVVWDVTFMSGTTLGE 1187
Query: 1206 RCSESRGYRMPAQAMINLSYGERLCGN 1232
R RG + + +++N ++ + + G+
Sbjct: 1188 RAPPFRGMTVASSSVLNTTHKQVISGS 1214
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 103/130 (79%), Gaps = 1/130 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPN-DNDPHFRITEKQ 59
MGVPKFFR++SERYP +S+V+ E +IPEFD LYLDMNGIIHNC+H + D FR++E++
Sbjct: 1 MGVPKFFRWLSERYPAISQVIAENRIPEFDALYLDMNGIIHNCTHKDAGEDATFRLSEEE 60
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+F IF+YIE LF I+PKKLF+MAIDGVAPRAKMNQQR RRFR+A +AE +KA + G
Sbjct: 61 MFIRIFNYIEHLFGKIKPKKLFYMAIDGVAPRAKMNQQRSRRFRTALDAENAREKAIKDG 120
Query: 120 ERLPTEKRFD 129
+P E FD
Sbjct: 121 VEMPKEAPFD 130
>gi|347831559|emb|CCD47256.1| similar to 5'-3' exoribonuclease 1 [Botryotinia fuckeliana]
Length = 1389
Score = 347 bits (891), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 169/317 (53%), Positives = 224/317 (70%), Gaps = 13/317 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK+LF+MA+DGVAPRAKMNQQR RRFR+A + E +KA ++G+ +P E FDSN ITPG
Sbjct: 77 PKQLFYMAVDGVAPRAKMNQQRARRFRTALDVENAREKAIKEGKEMPKEDAFDSNSITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L QL+YF+ KI+ D W+ T ++LSGHE PGEGEHKIM+YIR
Sbjct: 137 TEFMQKLTLQLKYFIAKKISEDVDWQGT---------EIVLSGHEVPGEGEHKIMEYIRL 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K++PDY+PN RHCLYGLDADLIMLGL +H+P+F LLREEV F +S ++ E
Sbjct: 188 KKAQPDYDPNRRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRQSKAKSKEL---EHQ 244
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F+L+HL ++R+YLELEF +LKE GVL FPF +E +IDD++LM F +GNDF+PNLP+LHI
Sbjct: 245 NFYLMHLCIVREYLELEFQELKEDGVLGFPFDLERVIDDFILMAFFVGNDFLPNLPNLHI 304
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GAL L++KVY+ +LP GYINEGG +N+ R L +L+ ++ F + +D + +
Sbjct: 305 NEGALALMFKVYKTILPKGGGYINEGGVINMSRLAILLEELSHVEYRFFESESSDSSWFK 364
Query: 438 GKMGKKFSDVFHKEKSK 454
K K DV K K+K
Sbjct: 365 AKQMSK-EDVMVKGKNK 380
Score = 332 bits (850), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 233/744 (31%), Positives = 366/744 (49%), Gaps = 32/744 (4%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K YY K ++ + L E Y++ +QW L+YYY G VSW WYY +HY+P
Sbjct: 502 KFQEWKDKYYEGKFEWDRKNEIELTKLCENYVQGLQWVLYYYYRGVVSWPWYYQYHYSPM 561
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+ ++ +++G+PF PF+QL+ VLP SK+++P Y +LMT SPI+++YP +
Sbjct: 562 ISDVIKGLKADVNFKLGQPFHPFEQLMGVLPDRSKKIVPTVYHDLMTNPASPIIDFYPRD 621
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NVN 681
F D+NGKK +WEAVV IPFIDE +L+ AM +LL+D E+ RN G L +TY +V+
Sbjct: 622 FELDMNGKKMEWEAVVKIPFIDEKRLLDAMATKNNLLSDAEKFRNEFGVSLKFTYDPDVD 681
Query: 682 -LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNL-KLYVTHFPTLKHV 739
+ + FP I H VE D + GL L + FP+L ++
Sbjct: 682 FIYPSSLTGIFPDIPHCHCVENIF--DLPTIEGLDFYHGLMDGAKLGSASLAGFPSLGYL 739
Query: 740 QFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQ 799
+ + V VFQ SRNES+++ + ++ + + A Q LGK +F+ YP L E +V
Sbjct: 740 PYNATLGFHGVNVFQSDSRNESMVVTIEDCEIRTNVKTAQQKLGKRVFVGYPFLQEGKVV 799
Query: 800 AVATK--DSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYG 857
V+ + D S D + P+ D F+ + I Y +LG+ IG E L +
Sbjct: 800 KVSDELFDYLPSEDASGQPITRPHGPREIDDFRKKAERIESTYSKRLGIIIGPVESLTHV 859
Query: 858 QPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESLEYKT---IDEIFYP 913
+ ++ K G ++ I T YA Q V + + K ++E F
Sbjct: 860 EMLKGLKKM--DDGATIKEYAVIPGQDTDYASQVVVDEVTSEDQRFLEKAALPVEEEFPV 917
Query: 914 GCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYT 973
+ F L + +YG G V + + + K ++ ++VH Y PS+
Sbjct: 918 DDRIFFLGDFNYGRPGLVEGHMDHKLQISLSTIKGKEVEFGRNIVH-DSKNATQYTPSFA 976
Query: 974 VASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKW 1033
VA L + PL+LS+ T S + + G R N+GLN+KF K +V+G++RR + W
Sbjct: 977 VAKMLGLHPLVLSKITSSFQV---SAVGQLRVNLGLNLKFEGKKLKVLGYSRRADNG--W 1031
Query: 1034 FYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHA 1093
++ + + LI YM +FP F ++ + Y D FP + +IV+WLK
Sbjct: 1032 EFSNKAIELISTYMTKFPHFFAGIQRKPQGNDYEESD-FPGAS---IKEIVAWLKTIESK 1087
Query: 1094 KAEVRPCGAAVVDAKVVSLIEHAVDTC---EKVEKQITLFVKPNKLYIPKPTLDKLCPDP 1150
E P A +D+ V IE A ++ TL P + + C
Sbjct: 1088 NFEKVPLDAEQLDSDTVMAIEQAAQHALVNGPQPQRTTLKAVPRGALLKPSDAEHRC--G 1145
Query: 1151 DTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCS 1208
+ KF L DRVV + D VP+ RGT++GI + T + DV+FD F G + RCS
Sbjct: 1146 NQKFALGDRVVYVADSGRVPIATRGTVVGISR--TPRTTLLDVLFDVTFMSGTTLGERCS 1203
Query: 1209 ESRGYRMPAQAMINLSYGERLCGN 1232
RG +P +++NL+ + + G+
Sbjct: 1204 PFRGSTVPIASVLNLTNKQLIAGS 1227
Score = 178 bits (451), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 105/129 (81%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + +D FR+TE+Q+
Sbjct: 1 MGVPKFFRWMSERYPSISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDDATFRMTEEQM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF+YIE L+ I+PK+LF+MA+DGVAPRAKMNQQR RRFR+A + E +KA ++G+
Sbjct: 61 FIAIFNYIEHLYGKIKPKQLFYMAVDGVAPRAKMNQQRARRFRTALDVENAREKAIKEGK 120
Query: 121 RLPTEKRFD 129
+P E FD
Sbjct: 121 EMPKEDAFD 129
>gi|357441511|ref|XP_003591033.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355480081|gb|AES61284.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 1029
Score = 347 bits (890), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 216/600 (36%), Positives = 315/600 (52%), Gaps = 98/600 (16%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEV-------LEQKAKE 178
FD++ F P+KL ++A DGVAPRAKMNQQR RRFR+AK+A L ++ E
Sbjct: 77 FDYVDHLFSLVRPRKLLYLATDGVAPRAKMNQQRSRRFRAAKDAAEAEAEEERLRKEFVE 136
Query: 179 KGERLPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
+G L ++ + DSN ITPGT FM L L+Y+V+ ++ + WK++
Sbjct: 137 EGALLSSKDKPETSDSNVITPGTKFMASLSVALQYYVQTRLNHNP---------AWKNIK 187
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM+YIR ++ P +NPN RHCLYGLDADLIML L THE +FS+LR
Sbjct: 188 VILSDSNVPGEGEHKIMEYIRLQRNIPGFNPNTRHCLYGLDADLIMLSLATHEVHFSILR 247
Query: 296 EEV-----------------------KFNTKSNKGGSQIVTP-EETKFFLLHLSLMRDYL 331
E + K TK+ G P + K+ L++ ++R+YL
Sbjct: 248 EVITLPGQDKCFVCGQAGHFAADCHGKPETKAEDGNPADEIPIHKKKYQFLNIWVLREYL 307
Query: 332 ELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQE 391
+ E P F E ++DD+V + F +GNDF+P++P L I GA+ LL +Y++
Sbjct: 308 QYELEIPNPP----FEIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRK 363
Query: 392 VLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKE 451
+ GY+ G + L R E F+ +A + +Q +K +Q + E
Sbjct: 364 EFTAMGGYLTYAGEVFLDRVEYFIQSVAVHE-DQIFQKRVRVQQV-------------AE 409
Query: 452 KSKEMDPDLAALI-KATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTD 510
++EM + +I + + D + L Y+E YY++ +FG +
Sbjct: 410 NNEEMRARVRGVILQEPRASFSDKVK--LGEPGYKERYYAE-----------KFGASSLE 456
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
++V +D Y+ + W YYYNG SW WYYP+HYAP+ SD+KD
Sbjct: 457 E----------IDKVKKDIVLKYVEGLCWVCQYYYNGVCSWKWYYPYHYAPFASDLKDLP 506
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKEL-----------LPEPYQNLMTLENSPILEYY 619
+L + + GEPF PF QL+ VLPA+ L LP+ Y++LMT +SPI +Y
Sbjct: 507 NLEIIFSPGEPFKPFDQLMGVLPASRFFLYHVLRSILSNALPDKYRDLMTDPSSPIFHFY 566
Query: 620 PEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSN 679
P +F D+NGK+ W+ V +PFIDE KL+ A +E LT +E + R+ ML Y N
Sbjct: 567 PADFEIDMNGKRFAWQGVAKLPFIDEKKLLAATRKLEDTLTMQEEEQRRNSVMLDLLYVN 626
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 80/117 (68%), Gaps = 16/117 (13%)
Query: 1 MGVPKFFRYISERYPC-LSEVVREYQIP-------------EFDNLYLDMNGIIHNCSHP 46
MGVP F+R++++RYP +S+VV + +P EFDNLYLDMNGIIH C HP
Sbjct: 1 MGVPAFYRWLADRYPLSISDVVEDDDVPSPIDASKPNPNGIEFDNLYLDMNGIIHPCFHP 60
Query: 47 NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFR 103
D P T ++F+ +F Y++ LF +++P+KL ++A DGVAPRAKMNQQR RRFR
Sbjct: 61 -DGKPS-PATYDEVFKLVFDYVDHLFSLVRPRKLLYLATDGVAPRAKMNQQRSRRFR 115
>gi|164655455|ref|XP_001728857.1| hypothetical protein MGL_4024 [Malassezia globosa CBS 7966]
gi|159102743|gb|EDP41643.1| hypothetical protein MGL_4024 [Malassezia globosa CBS 7966]
Length = 1426
Score = 347 bits (890), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 251/824 (30%), Positives = 411/824 (49%), Gaps = 64/824 (7%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K DYYH K+ + ++D YI +QW L+YYY G SW W+Y +HYAP +SD+K
Sbjct: 486 KADYYHTKMGIKYNDPDAIQDIVYNYIEGMQWVLYYYYEGNASWGWFYRYHYAPQVSDLK 545
Query: 568 DFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDL 627
+ S ++ G PFLPF+QL+ VLP SK+L+P +Q LMT +SPIL++YP ++ +D+
Sbjct: 546 NISDFTFQFNKGRPFLPFEQLMGVLPPLSKDLIPPAFQPLMTDPSSPILDFYPTKYESDM 605
Query: 628 NGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNV---NLGT 684
NGKK WEAVV IPFIDE +L+ A+ E LT EER RN G L + Y N ++ +
Sbjct: 606 NGKKNSWEAVVKIPFIDEERLLHALQLREGGLTAEERQRNTLGVPLRFCYDNTFTRHVPS 665
Query: 685 ALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQDVNLKL-YVTHFPTLKHV 739
+L P + P + +NH R Y P+ K L + V+L L + FP++K +
Sbjct: 666 SL-PGFLPDMPDNHT------RILTYALPSMEGKSFVKTLPEGVHLGLDAMPGFPSIKTL 718
Query: 740 QFTHKIENAKVKVFQQPSRNESIIIVQDKV--QVPSLKQVADQILGKTIFINYPHLIEIR 797
TH + V V S + S+++ + Q L+ +AD ++G T +I++P+L E
Sbjct: 719 PHTHTLRKYGVNVHGNASNDASMMLSVGRRDDQPDDLRSLADAMIGHTTYIHWPYLFEGL 778
Query: 798 VQAVATKDSRISFDKNSGPVFERA--AKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLV 855
V AV+ V R A DM+ +F +S+ Y + GV + + L+
Sbjct: 779 VVAVSDGSQEFRAHWQDADVVTRTTPAADMKTSFSKHVQSVLQYYGKRCGVLLHDVTALL 838
Query: 856 YGQPVESRKYFFGPRGKVTQQ-RTFIRSTVTYAYQSAVLNLQQARESLEYK---TIDEIF 911
+ +P++ + G G + +Q V Y V +++ + T+ E F
Sbjct: 839 HVRPLKGLSH--GYDGSIMKQYEPSPEHEVVYPLPLMVNQVRRPDSRFLERAPMTVSEEF 896
Query: 912 YPGCQCFALSNPHYGSGGCVISTVKE----ENSFIKLSFKVQQEPDLSDLVHLQDDTVYN 967
G + F L P +G VI + E E +F LS Q++ + LV Q
Sbjct: 897 PDGTKVFFLGMPGFGCPARVIGSASELITVELAF--LSDMAQEQAIIRKLV--QQRATDT 952
Query: 968 YLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRD 1027
Y S +A +L +S L L++ T SI ++ + + NIGLN+KF K+ +V+G++RR
Sbjct: 953 YFSSPAIAQQLHMSSLALAKLTSSITVLFKEQ----KLNIGLNLKFEAKSRKVLGYSRR- 1007
Query: 1028 ETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSD-DIYLRDDVFPHQGEQRVAQIVSW 1086
T W ++ + V LIK+ + QFPE+ L D + Y +DVFP ++R+A + +W
Sbjct: 1008 -THLGWEFSARAVLLIKDVLDQFPELKSALARRLGDGEFYKAEDVFPRDTDKRIAAVRAW 1066
Query: 1087 LKEQPHAKAEVRPCGAAVVDAKVVSLIEHAV--------DTCEKVEKQITLFVKPNKLYI 1138
KE E P ++ ++S +E AV ++ +++QI + L
Sbjct: 1067 QKEHGLRDLEDVPLYVDRLERPIISTLESAVSILANRRLESSGAIKRQILRGLPRGALLK 1126
Query: 1139 PKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKP 1198
P+ ++ P+ F+L DRV+N+ D ++PL +GT++GI G S DVVFD P
Sbjct: 1127 PEQARYRV---PEQTFELGDRVINVLDFGSIPLAAKGTVVGI--GAKS----IDVVFDAP 1177
Query: 1199 F--PHGVKIRCSESRGYRMPAQAMINLSYGE--RLCGNSNPHVKNINVMQSRGERNTNYA 1254
F H + CS RG + +++NLS + G N ++ +Q + +
Sbjct: 1178 FLTGHSLGGICSPYRGATLGLASVLNLSTPQIATRWGEQNEGQADLTPLQRTLKAQIHQQ 1237
Query: 1255 QVTRQPQRTTFYKENAPLVNSNLQVTSPYHVKVSRCNSQQSSVS 1298
+ P + + + + AP ++ + T+ H VSR + ++ +
Sbjct: 1238 MTSPAPSKGSLFYQPAP-PHAQSKPTASGH--VSRASRSRAGIG 1278
Score = 322 bits (825), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/289 (53%), Positives = 207/289 (71%), Gaps = 14/289 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+FF+AIDGVAPRAKMNQQR RRFR+A+EA+ +KA +GE LP FDSNCITPG
Sbjct: 23 PRKVFFLAIDGVAPRAKMNQQRSRRFRTAQEAKENVEKAIRRGEELPESPPFDSNCITPG 82
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L QQL YFV K++ D W+ V VILSGHE GEGEHKIM++IR
Sbjct: 83 TSFMRKLSQQLEYFVAKKVSEDS---------DWRGVEVILSGHEACGEGEHKIMEFIRT 133
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
+K++P YNPN RHCLYGLDADLIMLGL +H+P+F+LLRE+V F + + + V E
Sbjct: 134 IKAQPGYNPNTRHCLYGLDADLIMLGLLSHDPHFALLREQVTFGPRRAR---RSVGVESQ 190
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F+LLH+SL+R+YLELEF L++ L F F +E IIDD++L+ +GNDF+P+LP L I
Sbjct: 191 TFYLLHISLLREYLELEFASLRDK--LPFAFDLEKIIDDYILLHLFVGNDFLPHLPGLQI 248
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF 426
+GA+ LL++VY++VLP GY+NE G L +R + + +L + ++F
Sbjct: 249 NDGAIELLFRVYEKVLPQAGGYLNEQGVLRPERLQLVINQLFQLERDRF 297
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Query: 55 ITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQK 114
+ E+ IF IF YIE LF I+P+K+FF+AIDGVAPRAKMNQQR RRFR+A+EA+ +K
Sbjct: 1 MKEEDIFLGIFAYIEHLFSKIRPRKVFFLAIDGVAPRAKMNQQRSRRFRTAQEAKENVEK 60
Query: 115 AKEKGERLPTEKRFD--FITLKFCFPKKL 141
A +GE LP FD IT F +KL
Sbjct: 61 AIRRGEELPESPPFDSNCITPGTSFMRKL 89
>gi|400601005|gb|EJP68673.1| XRN 5'-3' exonuclease [Beauveria bassiana ARSEF 2860]
Length = 1398
Score = 346 bits (888), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 168/319 (52%), Positives = 220/319 (68%), Gaps = 15/319 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK+LFFMAIDGVAPRAKMNQQR RRFR+A E E +KA ++G +P E+ FDSNCITPG
Sbjct: 78 PKQLFFMAIDGVAPRAKMNQQRARRFRTALEVEKAREKAIKEGVEMPKEEPFDSNCITPG 137
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILSGHETPGEGEHKIMDYIR 256
T FM +L +QL+YFV K++ D W+ C ++LSGHE PGEGEHKIM+YIR
Sbjct: 138 TEFMAKLSRQLQYFVNKKVSEDTDWQG----------CEIVLSGHEVPGEGEHKIMEYIR 187
Query: 257 YMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEE 316
KS+P YN N+RHCLYGLDADLIMLGL +H+P+FSLLREEV F S ++ E
Sbjct: 188 NAKSQPGYNSNVRHCLYGLDADLIMLGLLSHDPHFSLLREEVTFGRASKNKSKEL---EH 244
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
FFLLHL ++R+YLE+EF +LK L F F +E +IDD++LM F +GNDF+PNLP LH
Sbjct: 245 QNFFLLHLCMVREYLEMEFQELKHQQDLGFEFDLERVIDDFILMAFFVGNDFLPNLPGLH 304
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL 436
I GAL ++++Y+ VLP GY++E G LN+KR + + +L+ + +QF AD ++
Sbjct: 305 INEGALADMFEIYKRVLPEEGGYLHENGVLNIKRALRMIAELSKVELKQFEHDIADEKWF 364
Query: 437 EGK-MGKKFSDVFHKEKSK 454
K M KK + K+K
Sbjct: 365 ASKQMEKKLQNTTAASKAK 383
Score = 311 bits (797), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 235/776 (30%), Positives = 382/776 (49%), Gaps = 53/776 (6%)
Query: 482 ANYEEY--YYSDEDEEWRTNFF-SEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQ 538
A+ EEY Y ++ + W+T ++ +F + ++ Y E + E Y+ +Q
Sbjct: 499 ASQEEYEKLYQEKYQAWKTKYYLQKFPEWESTAYA----------EEQTNLCENYVEGLQ 548
Query: 539 WNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKE 598
W L YYY G SW W+Y +HYAP ISD+ S+ L +E G+PF P++QL+ VLP SK+
Sbjct: 549 WVLFYYYRGIASWPWFYKYHYAPLISDVVKGSNAKLVFEKGQPFKPYEQLMGVLPDRSKK 608
Query: 599 LLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHL 658
++P Y +LMT +SPI+++YP +F D+NGKK DWEAVV IPFIDE +L+ AM+ L
Sbjct: 609 IVPTAYHDLMTNSSSPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRLLAAMETKNAL 668
Query: 659 LTDEERSRNRHGPMLVYTYS---NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNK 715
L+D+E+SRN G L +TYS N + L P FP + +E +I+ P+
Sbjct: 669 LSDDEKSRNGFGVPLKFTYSPEVNFTYPSPL-PGIFPDVQNCRCIE------NIFDLPSM 721
Query: 716 ----LRKGLCQDVNLKL-YVTHFPTLKHVQFTHK-IENAKVKVFQQPSRNESIIIVQDKV 769
+ L + LK+ + FP+L + T + IE + VFQ SRN SII+ +
Sbjct: 722 EGLVYKSALTEGAMLKMDALAGFPSLHTLPHTAQLIEGYGINVFQADSRNPSIIVTLTET 781
Query: 770 QVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDA- 828
+ S + LGK F+ +P L E +V V + ++ V R + + A
Sbjct: 782 EARSKTETWKARLGKKCFVGFPFLQEAKVVKVQDELFTYELGEDGVSVAMRDNTNRESAE 841
Query: 829 FQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESR-KYFFGPRGKVTQQRTFIRSTVTYA 887
F + + + Y +LG+ IG E L + K G K + IRS YA
Sbjct: 842 FAKEAEYLENWYAKRLGITIGQVECLTGVHMLRGLIKTEGGAMIKEYAENPSIRS--IYA 899
Query: 888 YQSAVLNLQQARESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKL 944
Q+ V + E + ++E F G + F L + YG + + + + +
Sbjct: 900 SQTVVDEVTNEDERFIERAALPVEEEFPQGTRAFFLGDYAYGRPLEITGHINGKTEIV-V 958
Query: 945 SFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKR 1004
S +EP+ S + Q + Y PS+ +A +L + PL+LS+ T S ++ S
Sbjct: 959 SVPKTKEPEFSRSIIQQAERGNPYTPSFAIAKQLGVHPLVLSKITSSFQVLTSAGLKLNL 1018
Query: 1005 HNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHS-SD 1063
N+KF + +V+G++R+ T W ++ + LI NYM FP+ F ++ H+
Sbjct: 1019 GL---NLKFEGRKLKVLGYSRKSNTG--WEFSNLAIQLIANYMVTFPDFFAAVQKHAQKS 1073
Query: 1064 DIYLRDDVFPHQ--GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCE 1121
DIY D++P Q QR+ + +WLK+Q +K E A +D+ +V + A +
Sbjct: 1074 DIY-DTDLWPDQSVASQRLKDLSAWLKKQETSKFEKVTLDAEQLDSDIVMALAKAGEQVF 1132
Query: 1122 KVEK--QITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIG 1179
+ + +I + + KP+ ++ T FKL DRV VP+ RGT++G
Sbjct: 1133 QASQDCEIRKLRGVPRTALLKPSDAEMVLGNQT-FKLGDRVTFAAAAGKVPIATRGTVVG 1191
Query: 1180 IVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNS 1233
I + T+ + D+V+D F G + R RG +PA +++N + + L +S
Sbjct: 1192 ISRTPTAL--LLDIVWDTSFMSGTTLGERAPVFRGQTVPASSVLNTTNRQVLSASS 1245
Score = 174 bits (440), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 104/130 (80%), Gaps = 1/130 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPN-DNDPHFRITEKQ 59
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + D FR++E++
Sbjct: 1 MGVPKFFRWLSERYPPISQLIAENRIPEFDCLYLDMNGIIHNCTHKDAGEDTTFRLSEEE 60
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+F IF+YIE LF I+PK+LFFMAIDGVAPRAKMNQQR RRFR+A E E +KA ++G
Sbjct: 61 MFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARRFRTALEVEKAREKAIKEG 120
Query: 120 ERLPTEKRFD 129
+P E+ FD
Sbjct: 121 VEMPKEEPFD 130
>gi|384488412|gb|EIE80592.1| 5'-3' exoribonuclease 1 [Rhizopus delemar RA 99-880]
Length = 1739
Score = 346 bits (888), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 171/342 (50%), Positives = 231/342 (67%), Gaps = 25/342 (7%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKKLFF+AIDGVAPRAKMNQQR RRFR+AK+AE QKA KGE LP + FD+NCITPG
Sbjct: 553 PKKLFFVAIDGVAPRAKMNQQRSRRFRTAKDAEDARQKALAKGEELPEQDPFDTNCITPG 612
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L QQLRYF+ K++ D W++V +ILSG E PGEGEHKIM+YIR
Sbjct: 613 TEFMIKLTQQLRYFISKKVSEDA---------DWRNVQIILSGPEVPGEGEHKIMEYIRL 663
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K++PDYNPN RHCLYGLDADL+MLGL +H+P+F+LLREEV F K + +
Sbjct: 664 AKAQPDYNPNTRHCLYGLDADLLMLGLLSHDPHFALLREEVTFGRNQKKK----IGLDNQ 719
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F+LLHL L+R+YL++EF LK L FP+ E ++DD++L+ IGNDF+P+LP++HI
Sbjct: 720 NFYLLHLCLIREYLDMEFSALKT--TLPFPYDFERVVDDFILLALFIGNDFLPHLPNIHI 777
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS-FDFEQFREKYADIQYL 436
GAL L++K+Y+E LPT +GY+ +GG +++ R +K L ++++ + E F + D YL
Sbjct: 778 NEGALGLMFKIYKETLPTCEGYLQDGGRVDMTRLQKVLDQISTVVEKEAFEAEGIDALYL 837
Query: 437 EGKM--GKKFSDVFH-------KEKSKEMDPDLAALIKATDD 469
GK G++ ++ H KE M A + +A D
Sbjct: 838 AGKQPDGERAREIVHQLERKKAKENKTSMTEHQAEIFRAVRD 879
Score = 315 bits (808), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 222/776 (28%), Positives = 374/776 (48%), Gaps = 73/776 (9%)
Query: 493 DEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWS 552
++E + F + F Q K +YY K++ ++ + Y+ IQW L YYYNG SW
Sbjct: 987 EKEEKAQFEAAFEQWKAEYYKDKMNIDINDSQEMEKLIGSYVIGIQWVLQYYYNGVASWG 1046
Query: 553 WYYPHHYAPYISDIKDFSHL-NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLE 611
W+YP+HYAP ISD+ + + + +G+PF P++QL+ VLP SK+LLP YQ LMT
Sbjct: 1047 WFYPYHYAPKISDLTNIVRFQDHTFTLGQPFKPYEQLMGVLPMLSKKLLPAAYQELMTDP 1106
Query: 612 NSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGP 671
+SPI+++YP +F D+NGKKQ WEA+V IPFIDE +L+ AM + EH LT +ER R G
Sbjct: 1107 SSPIIDFYPTDFDMDMNGKKQSWEAIVKIPFIDEKRLLDAMKSREHRLTKDEREMARFGE 1166
Query: 672 MLVYTYSNV---------NLGTALAPDYFPAINENHAVEKPLY-RDDIYVHP----NKLR 717
+ Y + + + P FP I +P + R+ + P LR
Sbjct: 1167 SYRFVYDDSIAKKDPKEWPVYKSPLPGKFPDI-------RPCFVRETVDCLPELPSTGLR 1219
Query: 718 KGLCQDVNL-KLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLK 775
KGL K + FP+L + I N V+VFQQ S NES+++ ++D+ + SL
Sbjct: 1220 KGLLPGAKTGKEALAGFPSLHTINHQFHIANHNVRVFQQDSSNESVVVTIKDRFKNASLH 1279
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKS 835
++A + +++++ YP+L + V V+ + ++ V + K + ++
Sbjct: 1280 ELAKLFIYRSVYVGYPYLKQAVVVGVSNAECKLHV------VLDAQGKKHCKEHRWDERE 1333
Query: 836 ITDGYYT----------KLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT 885
D Y T + G+ +G T+++ + + G + +Q
Sbjct: 1334 RDDWYNTVQRLQHLRSKRFGLLVGETDIVAHVCLLTGMHQ--TEEGAMVKQYAHPSLAEA 1391
Query: 886 YAYQSAVLNLQQAR---ESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFI 942
+Q+ V+ + L +++ + G CF G+ VI + N +
Sbjct: 1392 IPFQTIVIKVANPDPRFAELPAPPVEQSYPVGTACFLSDGKFIGTQTKVIGYTR-GNIDV 1450
Query: 943 KLSF----KVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDST 998
++ V+ +P+ V + + NYLP + VA + ++S L LS+ T S+ +I
Sbjct: 1451 EMEVYREKTVESKPEFGHAVAKKQEREVNYLPGHVVARECNVSSLTLSKLTSSLVVI--- 1507
Query: 999 EEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLK 1058
E ++ NIGLN+KF + E+V G+TR++ W Y+ V LI+ Y+ FPE L
Sbjct: 1508 ERSGQKLNIGLNLKFESRGEKVPGYTRKNPEAGYWEYSTLAVQLIREYIAAFPEFIEMLN 1567
Query: 1059 DHSSDDIY-LRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAV 1117
+ + + D + +G++ + + W+K + P A + V L+E A
Sbjct: 1568 GRKNSSMMDVSDFGWTSEGQKYLHAMKDWIKSRKVHDLPRAPNEAQELYDGYVQLVEKAA 1627
Query: 1118 DTCEK---VEKQITLFVKPNKLYIPKPTLDKLCPDP----DTKFKLFDRVVNIRDCYTVP 1170
++ E + T+ +K IP+ +L + P + F L DRVV + D VP
Sbjct: 1628 KKFQEQWDAEPKKTIIIKN----IPRKSLLRPSDAPFKLDNQTFTLGDRVVYVSDTGIVP 1683
Query: 1171 LGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
LG +GT++ + + + DV+FDKPF G + RC + RG + + +I S
Sbjct: 1684 LGLKGTVVALSE------KIIDVLFDKPFLGGTTLNGRCQDLRGAALSSWQVIKFS 1733
Score = 179 bits (454), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/124 (66%), Positives = 99/124 (79%)
Query: 6 FFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIF 65
F ISERYP SE++ + IPEFDNLYLDMNGI+HNCSH N +DPH+RITE+QI++ IF
Sbjct: 482 IFLTISERYPMCSELITDKAIPEFDNLYLDMNGIVHNCSHNNSDDPHYRITEEQIWRGIF 541
Query: 66 HYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTE 125
Y++ LF I+PKKLFF+AIDGVAPRAKMNQQR RRFR+AK+AE QKA KGE LP +
Sbjct: 542 QYMDHLFSKIKPKKLFFVAIDGVAPRAKMNQQRSRRFRTAKDAEDARQKALAKGEELPEQ 601
Query: 126 KRFD 129
FD
Sbjct: 602 DPFD 605
>gi|212535156|ref|XP_002147734.1| exonuclease Kem1, putative [Talaromyces marneffei ATCC 18224]
gi|210070133|gb|EEA24223.1| exonuclease Kem1, putative [Talaromyces marneffei ATCC 18224]
Length = 1419
Score = 345 bits (886), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 246/751 (32%), Positives = 375/751 (49%), Gaps = 45/751 (5%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K YY K + + E Y++ +QW L YYY G VSW WY+ +HYAP
Sbjct: 512 KFQEWKNKYYMEKFGHGLEDEAAMTKLTENYVQGLQWVLFYYYRGVVSWPWYFQYHYAPM 571
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K N+ +++G+PF PFQQL+ VLP SK+++P Y +LMT SPI+++YP +
Sbjct: 572 ISDVKKGLGANIDFKLGQPFRPFQQLMGVLPDRSKKIVPTAYWDLMTSPESPIIDFYPRD 631
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---N 679
F D+NGKK +WEAVV IPFIDE +L+ AM EHLLT EER+RN G L +TYS
Sbjct: 632 FELDMNGKKMEWEAVVKIPFIDEARLLPAMATREHLLTPEERARNEFGVTLKFTYSPSIE 691
Query: 680 VNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQDVNL-KLYVTHFP 734
++L P FP I H +E +IY P + GL V L + FP
Sbjct: 692 FTYPSSL-PGIFPDIPNCHCIE------NIYDLPTMDGLEHYVGLVDGVKLGAAALAGFP 744
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLI 794
TLK + ++ V VFQQ SR ES++I + S ++A + LG+ I++ YP L
Sbjct: 745 TLKTLPHAGQLAFHGVNVFQQDSRKESMVITLLGPEARSNVELAKEKLGQRIYVGYPFLQ 804
Query: 795 EIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTK-LGVDIGNTEV 853
E V V+ + + V Q K + YY+K LG+ IG E
Sbjct: 805 EALVVRVSDELFDYILPEGEQHVVSITHSPPQIEQWTRKSDKIEAYYSKRLGMIIGPVES 864
Query: 854 LVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLN-LQQARESLEYK--TIDE 909
+++ Q + + G ++ I T YA Q V + + + LE +I+E
Sbjct: 865 MIHVQLLRGLRK--NDDGATVKEFADIPGQETDYALQLVVDRVISEDQRFLERGAVSIEE 922
Query: 910 IFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQDDTVYNY 968
F G + F L +YG+ V T E+ + V+ +EP+ Q + + Y
Sbjct: 923 EFPEGSKAFFLGEFNYGA--PVQVTSHEDGKVHGMMIAVKGKEPEFGKQHVKQAEKLSPY 980
Query: 969 LPSYTVASKLSISPLLLSRFTGSIFI-IDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRD 1027
PS+ +A L ++ L+L++ T S + ID +R N+GLN+KF + +V+G++RR
Sbjct: 981 TPSFAIARNLRLNALVLAKITSSFSVTID-----GQRANLGLNLKFEARKLKVLGYSRRG 1035
Query: 1028 ETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSW 1086
E+ W ++ + + LI+ YM +FP+ ++ + D Y D +P + ++ +I +W
Sbjct: 1036 ESG--WEFSNKAIDLIQQYMIKFPDFIAGIQRNPQGDKYEPTDFYPEEIAMDKIKEIKAW 1093
Query: 1087 LKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITL----FVKPNKLYIPKPT 1142
LK E P A +D+ VV LIE D + + + V L P
Sbjct: 1094 LKSVESKHLERVPLDAEQLDSDVVKLIEADADRLTQTQSASEIKKIKSVPRQALLKPADV 1153
Query: 1143 LDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHG 1202
+L +F L DRVV +D VPL RGT++G+ + T DVVFD PF G
Sbjct: 1154 EHRLG---HQRFSLGDRVVYAQDSGKVPLATRGTVVGLTR--TPRTVFLDVVFDAPFMSG 1208
Query: 1203 VKI--RCSESRGYRMPAQAMINLSYGERLCG 1231
+ RCS RG +P +++NL+ + + G
Sbjct: 1209 TTLGDRCSPFRGQTVPISSVLNLTDRQLVAG 1239
Score = 343 bits (881), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 167/302 (55%), Positives = 216/302 (71%), Gaps = 12/302 (3%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKKLFFMAIDGVAPRAKMNQQR RRFRSA +AEV ++KA +G +P E FDSNCITPG
Sbjct: 77 PKKLFFMAIDGVAPRAKMNQQRARRFRSALDAEVAKEKAIAQGIEMPKEDAFDSNCITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RL +QL+YF+ KI+ D W+ V ++LSGHE PGEGEHKIM+YIR
Sbjct: 137 TEFMARLTKQLKYFISKKISEDV---------EWQGVEIVLSGHEVPGEGEHKIMEYIRQ 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K++P Y+PN+RHCLYGLDADLIMLGL +H+PYF LLREEV F ++ K ++ E
Sbjct: 188 AKAQPGYDPNVRHCLYGLDADLIMLGLLSHDPYFCLLREEVTFGRQAQKKSKEL---EHQ 244
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F+LLHL ++R+YLELEF +L+ F + +E IIDD++LM F +GNDF+PNLP +HI
Sbjct: 245 NFYLLHLCIVREYLELEFQELQLTTKSGFVYDMERIIDDFILMAFFVGNDFLPNLPHMHI 304
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GAL L++ Y+E LP + GYINE G +NL+R L L+ F+F F +Y+D +++
Sbjct: 305 NEGALALMFTKYKEALPKMGGYINEYGSINLQRLGILLDHLSEFEFRFFEAEYSDAKWIR 364
Query: 438 GK 439
K
Sbjct: 365 SK 366
Score = 183 bits (464), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 83/129 (64%), Positives = 104/129 (80%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFDNLY DMNGIIHNC+H + + P R++E Q+
Sbjct: 1 MGVPKFFRWLSERYPSISQLIAENRIPEFDNLYFDMNGIIHNCTHSDSDSPTHRMSEDQM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF+YIE L+ I+PKKLFFMAIDGVAPRAKMNQQR RRFRSA +AEV ++KA +G
Sbjct: 61 FIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRSALDAEVAKEKAIAQGI 120
Query: 121 RLPTEKRFD 129
+P E FD
Sbjct: 121 EMPKEDAFD 129
>gi|71028722|ref|XP_764004.1| exoribonuclease [Theileria parva strain Muguga]
gi|68350958|gb|EAN31721.1| exoribonuclease, putative [Theileria parva]
Length = 958
Score = 345 bits (886), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 251/804 (31%), Positives = 364/804 (45%), Gaps = 230/804 (28%)
Query: 1 MGVPKFFRYISERYPCLS----------------------EVVREYQIPEFDNLYLDMNG 38
MGVP F+R++ RYP + E++++ EFDNLYLDMNG
Sbjct: 1 MGVPTFYRWLCNRYPRVPKDVIDNYNDRNLDLSDPDAIGLELLKDNPNGEFDNLYLDMNG 60
Query: 39 IIHNCSHP-NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQ 97
IIH C HP N P +E+ +F I Y++ +F M++P+KL ++AI +
Sbjct: 61 IIHPCCHPENMEQPQ---SEEVMFTCILDYLDRIFFMVRPRKLIYLAIGNI--------- 108
Query: 98 RGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQ 157
K + IDGVAPRAK+NQ
Sbjct: 109 -----------------------------------------KNYIMICIDGVAPRAKINQ 127
Query: 158 QRGRRFRSAKEAEVLEQ----------KAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQ 207
QR RRF+SA A++ ++ K K + + + ++DSN ITPGT FM +L ++
Sbjct: 128 QRSRRFKSAALADLEDETYDTLIRDYEKRYGKTDLIVRKSKWDSNVITPGTEFMYKLSEK 187
Query: 208 LRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPN 267
L +++ + WK + VI S PGEGEHKIM +IR + PDY+PN
Sbjct: 188 LMEYIEDRAERYD---------AWKRIVVIFSDSNVPGEGEHKIMKFIRNQRHCPDYDPN 238
Query: 268 MRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF-------------------------NT 302
RH L+G+DADLIMLGL THEP F +LRE V F NT
Sbjct: 239 TRHVLHGMDADLIMLGLATHEPNFFILREIVTFFTNPTTNNTENAIANTLNIVSKPFKNT 298
Query: 303 KSNKGGS---QIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIEN------- 352
+S +G +++ L L ++R+YL + L FP EN
Sbjct: 299 ESAEGVQKYLKMMRENWKPLQFLQLPVLREYLSHQ---------LRFPLGFENGEMVDFE 349
Query: 353 -IIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRF 411
+DD VLM F GNDF+PNLP + I G++ + +YQ+VLP L+ Y+++ G LN
Sbjct: 350 RCVDDLVLMIFFCGNDFLPNLPSISITGGSIDQMLLLYQKVLPALNDYLSDEGKLNFHAI 409
Query: 412 EKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD- 470
F L+ + E F+ + E KM K +S++ + +L + D +
Sbjct: 410 TSFFELLSKIEDETFKNIH------EFKM---------KAQSRKQNNELNSADATNDSNG 454
Query: 471 YDDGTEEVLNYANYEEYYYSDEDEEWRT--NFFSEFGQH--------------------- 507
+ +GT SD+ EE R F E +
Sbjct: 455 HSEGTG-------------SDKSEEERIEDRFKKELKERINSCNVKDDVKLPVDVTLNDP 501
Query: 508 ---KTDYYHYKLDYAKVTNE----VLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYA 560
K YY K + E ++ + YI+ I W L YYY GC SWSWYY +HY+
Sbjct: 502 KLWKEAYYREKFNLGDKNQEEIDKFVQKLSFDYIKGICWVLQYYYQGCPSWSWYYRYHYS 561
Query: 561 PYISDIKDFSHLN------------------------------LKYEMGEPFLPFQQLLA 590
P+ SD+ FS L +K+++G P PFQQL+
Sbjct: 562 PFCSDLH-FSGLQSLEDYKSESQSEGEANLKRRHDSLEMGVKMIKFDLGVPLTPFQQLMG 620
Query: 591 VLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIK 650
V+P S LPE + LMT +SP+ E+YP +F D NGK+ ++ V L+PFIDE KL+
Sbjct: 621 VMPIRSSHCLPEKLRTLMTDPDSPLREFYPTKFREDPNGKRYKYQWVALLPFIDEKKLLT 680
Query: 651 AMDAVEHLLTDEERSRNRHGPMLV 674
+ +E L++EE+ RNR L+
Sbjct: 681 HVKPIEDELSEEEKIRNRTSNNLI 704
>gi|320590324|gb|EFX02767.1| exonuclease [Grosmannia clavigera kw1407]
Length = 1463
Score = 345 bits (884), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 163/302 (53%), Positives = 214/302 (70%), Gaps = 12/302 (3%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AEV +KA +G +LPT+ FDSNCITPG
Sbjct: 77 PKQLFFMAIDGVAPRAKMNQQRSRRFRTALDAEVARKKAIAEGAQLPTDDPFDSNCITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L +QL+YFV K++ DK W+ V+LSGH+ PGEGEHKIM+YIR
Sbjct: 137 TEFMAKLSKQLQYFVNKKVSEDK---------EWQQCTVVLSGHDVPGEGEHKIMEYIRN 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K++ DY+ NMRHCLYGLDADLIMLGL +H+P+F LLREEV F ++ ++ E
Sbjct: 188 AKAQKDYSANMRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRQTKTKSKEL---EHQ 244
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F+LLHL ++R+YLELEF +LK + F F++E IIDD++LM F +GNDF+PNLP LHI
Sbjct: 245 NFYLLHLCIVREYLELEFQELKTDKTMPFAFNMERIIDDFILMAFFVGNDFLPNLPRLHI 304
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GAL ++ +Y+ VLP +GYINEGG +NLKR L + + +F F + ++ +
Sbjct: 305 NEGALATMFSIYKRVLPKCEGYINEGGAVNLKRLGLLLEEFSKEEFRFFEHEIEGEKWFQ 364
Query: 438 GK 439
K
Sbjct: 365 AK 366
Score = 338 bits (868), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 239/752 (31%), Positives = 376/752 (50%), Gaps = 53/752 (7%)
Query: 500 FFSEFGQHKTDYYHYKLDY--AKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPH 557
+ +F Q K YY K + +++ EV R E Y++ +QW L+YYY G SW W+Y +
Sbjct: 548 YMLKFQQWKDGYYREKFAWTDGQLSEEV-RKLCENYVQGLQWVLYYYYRGIASWPWFYHY 606
Query: 558 HYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILE 617
HY+P ISD+ +L +++G+PF PF+QL+ VLP SK+++P Y LMT E+SPI++
Sbjct: 607 HYSPLISDVIKGLGADLNFKLGQPFKPFEQLMGVLPDRSKKIVPTVYWGLMTEEDSPIVD 666
Query: 618 YYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
+YP +F D+NGKK +WEAVV IPFIDE +L+ AM LL+ +E+SRN G + +T+
Sbjct: 667 FYPRDFELDMNGKKMEWEAVVKIPFIDERRLLTAMKPKNALLSADEQSRNEFGAPIEFTF 726
Query: 678 ---SNVNLGTALAPDYFPAINENHAV----EKPLYRDDIYVHPNKLRKGLCQDVNLKLYV 730
++ ++L FP I V E P ++H L G + + +
Sbjct: 727 HPGTDFMYPSSLT-GIFPDIPHCRCVMNMFELPATEGLEFLH--DLTGGALLNASA---L 780
Query: 731 THFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINY 790
FP+L + + + V VFQQ SRN S+++ + + + A Q LG+ + Y
Sbjct: 781 AGFPSLATLPYRAMLTYHGVNVFQQESRNASMVVTLSESARQTKVEAARQKLGQRCHVGY 840
Query: 791 PHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGN 850
P L E +V V+ + + D+ G + +Q +SI + Y +LG+ IG
Sbjct: 841 PFLQEAKVVRVSDELFDYTLDEQGGVEQHHHGGKEMERWQSKARSIEENYSRRLGIVIGT 900
Query: 851 TEVLVYGQPVESR-KYFFGPR----GKVTQQRT-FIRSTVTYAYQSAVLNLQQARESLEY 904
E LV+ ++ K G G+V T F TV +V+N E
Sbjct: 901 VESLVHVHMLKGLVKTDVGATIKEYGEVAVMETDFAAQTVV----DSVVNEDARFIEREA 956
Query: 905 KTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDT 964
I++ F G F + + YG I+ + +S Q+EP+ + V LQ +
Sbjct: 957 VAIEDEFPVGSHAFFVGDLAYGR-PLEIAEHHGNKMDVCVSMLKQREPEFAHQVVLQAER 1015
Query: 965 VYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFT 1024
Y PS+ VA L + PL LS+ T S ++ G + N+GLN+KF K ++V+G +
Sbjct: 1016 ENRYQPSFAVAKSLDLHPLSLSKITSSFYVFSV---GGLKVNLGLNLKFEGKKQKVLGMS 1072
Query: 1025 RRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKD--HSSD----DIYLRDDVFPHQGEQ 1078
R+ T W ++ + +I YM FP+ F LK H+ D DI+ +V Q
Sbjct: 1073 RKSATG--WEFSAAAIGMIARYMMAFPDFFAGLKHLPHNRDIKDTDIWSSQEV----ASQ 1126
Query: 1079 RVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCE----KVEKQITLFVKPN 1134
RV +I +WLK+Q + E P A +D+ VV + D + +E ++ V N
Sbjct: 1127 RVKEIGAWLKKQETGQLERVPLDAEQLDSDVVGRLAREADEAQLASAAMEPKLMRNVPRN 1186
Query: 1135 KLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVV 1194
+ P +L + +F L DRVV ++D VP+ RGT++GI G T+ + DVV
Sbjct: 1187 AVLKPADAEQRLG---NQRFTLGDRVVYVQDSGKVPIALRGTVVGI--GRTTTTKLLDVV 1241
Query: 1195 FDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
FD F G + RC RG +PA +++NL+
Sbjct: 1242 FDTTFMSGTTLGDRCPAFRGQTVPAASVLNLT 1273
Score = 180 bits (457), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 105/129 (81%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + +D R+ E+++
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHSDSDDAFTRLGEEEM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF+YIE LF I+PK+LFFMAIDGVAPRAKMNQQR RRFR+A +AEV +KA +G
Sbjct: 61 FIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRSRRFRTALDAEVARKKAIAEGA 120
Query: 121 RLPTEKRFD 129
+LPT+ FD
Sbjct: 121 QLPTDDPFD 129
>gi|260949235|ref|XP_002618914.1| hypothetical protein CLUG_00073 [Clavispora lusitaniae ATCC 42720]
gi|238846486|gb|EEQ35950.1| hypothetical protein CLUG_00073 [Clavispora lusitaniae ATCC 42720]
Length = 1430
Score = 344 bits (882), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 169/313 (53%), Positives = 215/313 (68%), Gaps = 19/313 (6%)
Query: 128 FDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEK 187
FD I PK++F+MAIDGVAPRAKMNQQR RRFR+A EAE +KA +GE +P E
Sbjct: 36 FDIIK-----PKEVFYMAIDGVAPRAKMNQQRSRRFRTAYEAEENLRKAISQGEVIPKED 90
Query: 188 RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEG 247
FDSN ITPGT FM +L L+YF+ KIT D W + + VILSGHE PGEG
Sbjct: 91 PFDSNAITPGTEFMAKLTNNLKYFIHKKITEDNRWAN---------IKVILSGHEVPGEG 141
Query: 248 EHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKG 307
EHKIM +IR MKS+ DYNPN+RHC+YGLDADLIMLGL TH+P+FSLLREEV F S
Sbjct: 142 EHKIMQFIRSMKSQDDYNPNLRHCIYGLDADLIMLGLVTHDPHFSLLREEVVFGPSSRNK 201
Query: 308 GSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGND 367
I E F+LLHLSL+R+Y+ LEF L+ G L F +S E ++DD++L+ ++IGND
Sbjct: 202 SGDI---HEQNFYLLHLSLLREYMGLEFQDLE--GELPFEYSFERVLDDFILIMYVIGND 256
Query: 368 FIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFR 427
F+PNLPDLHI GA P L ++E L +DGY+NEGG +N KRF +L L+ F+ E F
Sbjct: 257 FLPNLPDLHINKGAFPFLIGAFKESLKHMDGYLNEGGKINFKRFGTWLEYLSEFELENFE 316
Query: 428 EKYADIQYLEGKM 440
++ D ++ ++
Sbjct: 317 KQNVDAEWFNKRL 329
Score = 294 bits (753), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 234/769 (30%), Positives = 383/769 (49%), Gaps = 91/769 (11%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K +YY KL ++ E + + Y+ +QW L+YYY GC SW+WY+ +HYAP
Sbjct: 474 KFVRAKDEYYKKKLHFSIHDEEKMIEFTRHYLEGLQWVLYYYYKGCASWNWYFRYHYAPR 533
Query: 563 ISDI----KDFSHLN---LKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPI 615
ISD+ KD N + +++ PF PF+QL+AVLPA S++L+P+ Y++LMT E+SPI
Sbjct: 534 ISDVAMGVKDMLEKNQDEIHFDLATPFKPFEQLMAVLPARSRKLMPDVYRSLMTDEHSPI 593
Query: 616 LEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
+++YP E DLNGK WEAVVL+ F+DE +L++A+ +E LT E RN +G +++
Sbjct: 594 IDFYPHEVEIDLNGKTASWEAVVLLSFVDEKRLLEALKPIEAKLTPAETKRNSYGQDVIF 653
Query: 676 TYS--NVNLGTALAPDYFPAINENHAVEK-----PLYRDDIYVHPNKLRKGLCQDVNLKL 728
+ N N+ P YF + + E+ P+ + + P + G K
Sbjct: 654 IRNPQNDNVYPTPLPGYFQDLEHDQCYEEFFTLPPVDANFKFELPEGAKLG-------KE 706
Query: 729 YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIF 787
+ FPTL V F K+ A+VK+F PS++ES+++ V + + S+ Q A + LGK ++
Sbjct: 707 ALAGFPTLYTVPFESKLALAEVKIFNFPSKSESMLLKVGNMWEDISINQFAYKFLGKVVY 766
Query: 788 INYPHLIEIRVQAVATKDSRISFDKNSGP---VFERAAKDMQDAFQLSKKSITDGYYTKL 844
+P+LIE RV V +S+ + K+ V + + F K ++ Y
Sbjct: 767 SKWPNLIESRVTQVWGLESKFEYVKSGAGRRVVATPLSPEENREFSAIKGNLKSKYEKTK 826
Query: 845 GVDIGNTEVLVYGQPVESRKYFFGPRGKV-TQQRTFIRS----TVTYAYQSAVLNLQQAR 899
GV + E +V+ Q V +G V TQ+ +++S + Q V N+
Sbjct: 827 GVILKKIEAVVFVQHV---------KGLVRTQKGAYVKSFHDEADVFPMQLIVENVVNED 877
Query: 900 ESLEYK---TIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQ-----E 951
E + I+E F G L YG+ V+ + KL+ +Q+ E
Sbjct: 878 ERYASRPPVPIEEEFPIGLPVVFLGAFAYGAPAIVMGYTGD-----KLNVSIQKIQSALE 932
Query: 952 PDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNI 1011
PD+ + ++ Y+ SY A L I+ LLLS+ TGS + D G + NIGL++
Sbjct: 933 PDIGRKRYNIENKEIPYVASYDAAKILGINGLLLSKITGSFMLRD---RGMSKVNIGLDL 989
Query: 1012 KFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDV 1071
KF + +V+G+TR++ K W Y+ + LIK Y +FP+VF L S R D+
Sbjct: 990 KFDVRRLKVLGYTRKN--GKFWEYSPLAIDLIKEYKSKFPKVFAQLSKLGS-----RRDM 1042
Query: 1072 FPHQGE----QRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQI 1127
P E + + QIV WLK+ +V +++ + + IE +D + + +
Sbjct: 1043 -PSTSEIGSPEELKQIVQWLKKAKSGLVQVSLESSSLTKFSIAA-IETYMDNY--ITRPL 1098
Query: 1128 TLFVKPNKLYIPKPTLDKLCPDPDT--------KFKLFDRVVNIRDCYTVPLGYRGTIIG 1179
TL K K +PK + +P T +F L DR++ ++D VP +GT++
Sbjct: 1099 TLDSKDVKA-VPKDAV----INPSTSYSLLQNQRFTLGDRIIYVQDSGKVPKLSKGTVVA 1153
Query: 1180 I--VQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
I V +TS VVFD P G + + +RG + + ++N++
Sbjct: 1154 ITTVGSKTS----LSVVFDHPLVTGNNMNGKLKSNRGLIIDSSLVLNIT 1198
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MN I+H C+H +DND R+T+ Q++ IF+YI+ LF +I+PK++F+MAIDGVAPRAKMN
Sbjct: 1 MNSILHTCTH-SDNDTLTRMTDDQMYAAIFNYIDHLFDIIKPKEVFYMAIDGVAPRAKMN 59
Query: 96 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
QQR RRFR+A EAE +KA +GE +P E FD
Sbjct: 60 QQRSRRFRTAYEAEENLRKAISQGEVIPKEDPFD 93
>gi|399949668|gb|AFP65326.1| dhm exonuclease [Chroomonas mesostigmatica CCMP1168]
Length = 549
Score = 344 bits (882), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 216/550 (39%), Positives = 296/550 (53%), Gaps = 88/550 (16%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTE----KRFDSNC 193
P+KL ++AIDGVAPRAKMNQQR RRFRS KE LE+ + + +P E K FDSNC
Sbjct: 73 PRKLIYLAIDGVAPRAKMNQQRSRRFRSVKE---LEKTKLTQEKNVPLENFEKKYFDSNC 129
Query: 194 ITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMD 253
ITPGT FM RL Q + ++ KI D W+ +I SG E PGEGEHKIM+
Sbjct: 130 ITPGTTFMKRLSQSFKKWLAKKIRNDPEWQQGCD--------IIFSGSEVPGEGEHKIMN 181
Query: 254 YIRYM-KSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV--KFNTKSNKGGSQ 310
YIR + KSK ++RHCLYGLDADLIMLGL HE F+LLRE++ K SNK
Sbjct: 182 YIRKIQKSKSRKITSLRHCLYGLDADLIMLGLVAHENQFTLLREKLIWKGTPSSNKSVDF 241
Query: 311 IVTPEE---TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGND 367
+ +F LL +SL+RD L LEF K F ++IE I+DD++ + LIGND
Sbjct: 242 FKRKDNFAGDEFHLLEISLLRDMLYLEF---KPKERCEFDYNIERIVDDFIFICMLIGND 298
Query: 368 FIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFR 427
F+P+LP L I +G L LL + YQE+ GY+ +++ R E FL K+++
Sbjct: 299 FLPSLPHLDIASGGLNLLVRSYQEIQLKTKGYLTSKHRMHIGRVELFLEKISN------- 351
Query: 428 EKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEY 487
++F V K KE +P NY++
Sbjct: 352 ------------EAEEFFFVQKKNFDKEKEP-----------------------WNYKKD 376
Query: 488 YYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNG 547
YYS T + ++D + L +TN YI + W L+YY+ G
Sbjct: 377 YYS-------TKLMFDIFSKESDKFLSIL----ITN---------YIHGLNWCLYYYHLG 416
Query: 548 CVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNL 607
C SW+WYYP +Y P SD+K+ + + + G PF P QLL+VLP S LP+ ++NL
Sbjct: 417 CPSWNWYYPEYYTPLASDLKNLYKIKINFTKGRPFEPLMQLLSVLPPNSSSFLPKSFENL 476
Query: 608 MTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMD--AVEHLLTDEERS 665
M +NSPIL +YP + DLNGKK WE +V++PFID+ KL A+ + ++E+
Sbjct: 477 MIQKNSPILNFYPLNYKIDLNGKKNLWEGIVVLPFIDQKKLSDAVKRYGKKQNFNEDEKI 536
Query: 666 RNRHGPMLVY 675
RN G +++
Sbjct: 537 RNCFGKDVIF 546
Score = 130 bits (326), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 82/109 (75%), Gaps = 4/109 (3%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +++ + E +FD YLDMNGIIHNCS N+ E+++
Sbjct: 1 MGVPKFFRWLSERYPLINQRLLENN--QFDCFYLDMNGIIHNCSQKNNEIG--TQYEEEL 56
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAE 109
F+ IF Y + LFR+++P+KL ++AIDGVAPRAKMNQQR RRFRS KE E
Sbjct: 57 FRKIFSYTDHLFRIVRPRKLIYLAIDGVAPRAKMNQQRSRRFRSVKELE 105
>gi|320580141|gb|EFW94364.1| 5'-3' exoribonuclease, putative [Ogataea parapolymorpha DL-1]
Length = 1369
Score = 343 bits (881), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 162/303 (53%), Positives = 222/303 (73%), Gaps = 13/303 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+F+MAIDGVAPRAKMNQQR RRFRSA EAE +KA ++G+ +P E FDSN ITPG
Sbjct: 23 PQKVFYMAIDGVAPRAKMNQQRARRFRSAIEAEQNLEKAIKEGKEIPKEPPFDSNAITPG 82
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L Q L++++ K ++D W++ + +ILSGHE PGEGEHKIMD+IR
Sbjct: 83 TEFMAKLTQNLKFYINQKASSDSRWQN---------MRIILSGHEVPGEGEHKIMDFIRT 133
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
K++PDY+PN RHC+YGLDADLIMLGL HEP+F+LLREEV F K+N +T +
Sbjct: 134 QKAQPDYDPNTRHCVYGLDADLIMLGLVAHEPHFALLREEVTFGPKANSHSDDDLT--QQ 191
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
FFLLH+SL+R+Y+ELEF +L++ LSF + E IIDD++L+ ++IGNDF+PNLPDLH+
Sbjct: 192 TFFLLHISLVREYMELEFQELQDQ--LSFEYDFERIIDDFILIMYVIGNDFLPNLPDLHL 249
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GA PLL + ++E + +DGYINE G +NL+RF K+L L+ F+ E F + D+++
Sbjct: 250 NKGAFPLLIETFKEAIRDMDGYINEFGTINLQRFGKWLEYLSVFELENFEKGEVDVEWFN 309
Query: 438 GKM 440
++
Sbjct: 310 KQL 312
Score = 311 bits (798), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 241/803 (30%), Positives = 390/803 (48%), Gaps = 65/803 (8%)
Query: 467 TDDDYDDGTEEVLNYANYEEYYYSDEDEE----WRTNFFSEFGQHKTDYYHYKLDYAKVT 522
TD+++++ E + + EDEE + + + F + K +YY K+ ++
Sbjct: 419 TDEEFNERVEGIRRVIKKYQTAIVVEDEETLESQKDLYDARFVKWKNEYYKKKVGFSLND 478
Query: 523 NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPF 582
+ +RD AE YI +QW L+YYY G SW WYY +HYAP ISD+ ++ + +E G PF
Sbjct: 479 EDKIRDMAENYIEGLQWVLNYYYKGISSWPWYYRYHYAPRISDVSKGLNVKINFEKGHPF 538
Query: 583 LPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPF 642
PFQQL+AVLPA SKEL+P Y+ LMT NSPI+++YP++ D+NGKK WEAVVL+ F
Sbjct: 539 KPFQQLMAVLPARSKELIPTVYRPLMTDSNSPIIDFYPDDCEVDMNGKKAPWEAVVLLSF 598
Query: 643 IDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSN--VNLGTALAPDYFPAINENHAV 700
+DE +LI+AM + L+ EE+ RN G L + ++ +L + P F E+H
Sbjct: 599 VDEKRLIEAMAPFDSKLSPEEKQRNSFGTDLQFHFNPQIKHLIKSPLPASFSDF-ESHCT 657
Query: 701 EKPLYRDDIYVHPNKLRKGLCQDVNL-KLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRN 759
E + + K+ GLC+ + + FP+LK + + +E A V VFQQPS+
Sbjct: 658 ETEFHLPSL--EGLKINFGLCKGAKFGREALAGFPSLKTIPCQYNLEYANVVVFQQPSKA 715
Query: 760 ESIIIVQDKVQVP-SLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDK-NSGPV 817
++++ + + +++Q A + +G+ ++ +P L E +V V D+ + ++K G V
Sbjct: 716 MTLMLTLENLHSSLTVEQFAKEYVGQIVYTKWPFLREAKV--VYVTDNLMRYEKVKMGSV 773
Query: 818 FERAAKDMQ----DAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQ----------PVESR 863
+ + ++ D F+ ++ + T GV E + P+E
Sbjct: 774 PKVVSSPLESFERDDFEKTRSLLYHKLQTNKGVRFQAAEADDQSEDGAKTSSTKNPIEGL 833
Query: 864 KYFFGPRGKVTQQ-----RTFIRSTVTYAYQ---SAVLNLQQARESLEYKTIDEIFYPGC 915
Y G + + +T+ + Y Q V+N E+ I+E F
Sbjct: 834 VYVRAVNGLIRNEHGAFVKTYAKEIECYPIQLIVDEVINKDTRFEARPPVPIEEEFPKNS 893
Query: 916 QCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQ-----EPDLSDLVHLQDDTVYNYLP 970
L YG+ VI EN+ KL+ KV + EP+ L + Y P
Sbjct: 894 TVVFLGAFAYGAPADVID---HENN--KLTLKVSRISKKAEPNFGVLRAQHEKKAIRYHP 948
Query: 971 SYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETT 1030
S TVA L SPL LS+ T S + G +R++IGL +KF K +V+G+TRR++
Sbjct: 949 SSTVAKILKFSPLFLSKLTSSYAV---EGPGGRRYDIGLPLKFEGKKMKVLGYTRRND-- 1003
Query: 1031 KKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVF----PHQGEQRVAQIVSW 1086
+ W Y++ ++LI+ Y K+FP+VF L +H I ++F P + ++ + S+
Sbjct: 1004 RYWEYSDLAISLIQEYTKKFPDVFKALMEHKGSSIPSAKEIFKIAEPDKLRAKLDAVQSF 1063
Query: 1087 LKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKP---NKLYIPKPTL 1143
LKE+ V + V L + +D K + T +K N + P +
Sbjct: 1064 LKEKKSTFVTVSLESESFTKIGVAELEQQIIDYMAKPQPLDTKGIKGIPRNAVLAPSQSF 1123
Query: 1144 DKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGV 1203
L F L DRVV + D VPL +GT+IGI E+ + V+FD+P G
Sbjct: 1124 QLL---KKQHFSLGDRVVYVLDSGNVPLFSKGTVIGIRSLESKVE--LQVLFDQPLLTGN 1178
Query: 1204 KI--RCSESRGYRMPAQAMINLS 1224
R RG + + ++NL+
Sbjct: 1179 TFGGRLKTQRGLTLDSSVLLNLT 1201
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 59/75 (78%)
Query: 55 ITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQK 114
+T+ Q+F IF YI+ LF +I+P+K+F+MAIDGVAPRAKMNQQR RRFRSA EAE +K
Sbjct: 1 MTDDQMFGAIFAYIDHLFNIIKPQKVFYMAIDGVAPRAKMNQQRARRFRSAIEAEQNLEK 60
Query: 115 AKEKGERLPTEKRFD 129
A ++G+ +P E FD
Sbjct: 61 AIKEGKEIPKEPPFD 75
>gi|222619617|gb|EEE55749.1| hypothetical protein OsJ_04252 [Oryza sativa Japonica Group]
Length = 1042
Score = 343 bits (881), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 227/625 (36%), Positives = 312/625 (49%), Gaps = 112/625 (17%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK------ 179
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFR+AK+A + +
Sbjct: 82 FDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLREEFER 141
Query: 180 -GERLPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
G +LP +++ DSN ITPGT FM L L+Y++ L++ D WK V
Sbjct: 142 EGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIHLRLNYDP---------GWKQVK 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ P +NPN RHCLYGLDADLIML L THE +FS+LR
Sbjct: 193 VILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLALATHEVHFSILR 252
Query: 296 E------------------------EVKFNTKS---NKGGSQIVTPEETKFFLLHLSLMR 328
E E K K+ ++ G IV + +F L++ +R
Sbjct: 253 EVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGEAIVPKKPYQF--LNIWTLR 310
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL-----------HI 377
+YLE EF +++ P FP E I+DD++ M F +GNDF+P++P L H
Sbjct: 311 EYLEYEF-RMQNP---PFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREPDLNKVEHF 366
Query: 378 INGALPLLYKVYQEVL--------------------PTLDGYINEGGYLNLKRFEKFLTK 417
I K++Q+ LD ++ + + + RF+ ++
Sbjct: 367 IQAVGSYEDKIFQKRARLHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVARFQG--SR 424
Query: 418 LASFDFEQFREKYADIQYLEGK--MGKKFSDVFHKEKSK-----EMDPDLAALIKATDDD 470
LAS E+ + GK +K + V S E + DL A + +D
Sbjct: 425 LASGPVPSPYEQNGSDKNNGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKED 484
Query: 471 ----YDDGTEE---VLNYANYEEYYYSDEDEEWRTNFFSE-FGQHKTDYYHYKLDYAKVT 522
D E V N N EE + WR ++ E FG
Sbjct: 485 LKTMLKDALREKSDVFNSENPEEDKIKLGEPGWRERYYEEKFGARTPG----------QI 534
Query: 523 NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPF 582
E+ RD Y + W +HYYY G SW W+YP+HYAP+ SD+ LN+ +E+G PF
Sbjct: 535 EEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGSPF 594
Query: 583 LPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPF 642
PF QL+ V PAAS LP Y+ LMT NSPI+++YP +F D+NGK+ W+ + +PF
Sbjct: 595 KPFDQLMGVFPAASSHALPVQYRQLMTDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPF 654
Query: 643 IDEVKLIKAMDAVEHLLTDEERSRN 667
IDE +L+ + VEH LT EE RN
Sbjct: 655 IDEARLLAEIKKVEHTLTPEEARRN 679
Score = 114 bits (286), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 21/122 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREY--------QIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + V E ++P EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D T ++FQ +F YI+ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRP--SPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FR 103
FR
Sbjct: 119 FR 120
>gi|346325316|gb|EGX94913.1| exonuclease Kem1, putative [Cordyceps militaris CM01]
Length = 1394
Score = 342 bits (876), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/311 (52%), Positives = 217/311 (69%), Gaps = 15/311 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P++LFFMAIDGVAPRAKMNQQR RRFR+A E E+ +KA ++G +P E+ FDSNCITPG
Sbjct: 78 PRQLFFMAIDGVAPRAKMNQQRARRFRTALEVEMAREKAIKEGVEMPKEEPFDSNCITPG 137
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILSGHETPGEGEHKIMDYIR 256
T FM +L +QL+YFV K++ D W+ C ++LSGHE PGEGEHKIM+YIR
Sbjct: 138 TAFMAKLSRQLQYFVNKKVSEDTDWQG----------CEIVLSGHEVPGEGEHKIMEYIR 187
Query: 257 YMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEE 316
KS+P YNPN+RHCLYGLDADLIMLGL +H+P+FSLLREEV F S ++ E
Sbjct: 188 NAKSQPGYNPNVRHCLYGLDADLIMLGLLSHDPHFSLLREEVTFGRASKNKSKEL---EH 244
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
FFLLHL ++R+YLE+EF +LK+ F +E +IDD++LM F +GNDF+PNLP LH
Sbjct: 245 QNFFLLHLCMVREYLEMEFQELKQTQDSGLEFDLERVIDDFILMAFFVGNDFLPNLPGLH 304
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL 436
I GAL ++++Y+ +LP GY++E G LN+KR + + +L + +QF +D ++
Sbjct: 305 INEGALADMFEIYKRILPEEGGYLHENGVLNIKRALRMIAELGKVEIKQFEHDVSDEKWF 364
Query: 437 EGK-MGKKFSD 446
K M KK +
Sbjct: 365 ASKQMEKKLQN 375
Score = 311 bits (797), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 235/754 (31%), Positives = 370/754 (49%), Gaps = 52/754 (6%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAEC--YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISD 565
KT YY K + T A C Y+ +QW L YYY G SW W+Y +HYAP ISD
Sbjct: 514 KTKYYLQKFPEWESTAYADEQTALCENYVEGLQWVLFYYYRGIASWPWFYKYHYAPLISD 573
Query: 566 IKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFAT 625
+ ++ L +E G+PF P++QL+ VLP SK+++P Y +LMT SPI+++YP +F
Sbjct: 574 VAKGANAKLLFEKGQPFKPYEQLMGVLPDRSKKIVPTAYHDLMTSPASPIIDFYPRDFEL 633
Query: 626 DLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSN-VNLG- 683
D+NGKK DWEAVV IPFIDE +L+ AM+ LL+DEE++RN G L +TYS+ VN
Sbjct: 634 DMNGKKMDWEAVVKIPFIDEKRLLAAMETKNVLLSDEEKARNGFGVPLQFTYSSEVNFTY 693
Query: 684 TALAPDYFPAINENHAVEKPLYRDDIYVHPNK----LRKGLCQDVNLKL-YVTHFPTLKH 738
+ P FP + +E +I+ PN + L LK + FP+L
Sbjct: 694 PSPLPGIFPEVQNCRCIE------NIFDLPNMEGLVYKSALTDGAKLKTDALAGFPSLHT 747
Query: 739 VQFTHK-IENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIR 797
+ T + IE + VFQ SRN S+I+ + + S + LGK F+ +P L E +
Sbjct: 748 LSHTAQLIEGYGINVFQADSRNPSVIVTLTETENRSKTETWKARLGKKCFVGFPFLQEAK 807
Query: 798 VQAVATKDSRISFDKNSGPVFERAAKDMQDA-FQLSKKSITDGYYTKLGVDIGNTEVLVY 856
V V + + ++ V + + + + A F + + + +LGV IG E LV
Sbjct: 808 VVKVQDELFTYTLGEDGVEVIMKDSTNRECADFAKEADFLENWHAKRLGVRIGQVECLV- 866
Query: 857 GQPVESRKYFF----GPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKT---IDE 909
V K F G K + +RS YA Q+ V ++ E K ++E
Sbjct: 867 --GVHMLKGLFKTEEGALVKEYAENPSVRS--IYASQTIVDDVLNEDERFIEKAALPVEE 922
Query: 910 IFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYL 969
F G + F L + +G + S V + + +S +EP+ S + Q + Y
Sbjct: 923 EFPQGTRAFFLGDYAFGRPLEITSHVNGKTEIV-VSVPKTKEPEFSRSIIQQAEKANPYT 981
Query: 970 PSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDET 1029
PS+ +A +L + PL+LS+ T S ++ S N+KF + +V+G++R+ T
Sbjct: 982 PSFAIAKQLGVHPLVLSKITSSFQVLTSAGLKLNLGL---NLKFEGRKLKVLGYSRKSNT 1038
Query: 1030 TKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHS-SDDIYLRDDVFPHQ--GEQRVAQIVSW 1086
W ++ + LI NYM FP+ F ++ H+ DIY D++P Q QR+ + +W
Sbjct: 1039 G--WEFSRMAIQLIANYMVAFPDFFAAVQKHAQKSDIY-DTDLWPDQSVASQRLKDLSAW 1095
Query: 1087 LKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLY-IPKPTL-- 1143
LK+Q +K E A +D+ +V + A + + + + KL +P+ L
Sbjct: 1096 LKKQETSKFEKVTLDAEQLDSDIVMALAAAGEQVHRASQNSDI----RKLRGVPRSALLK 1151
Query: 1144 --DKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPH 1201
D + FKL DRV + VP+ RGT++GI + T+ + DVV+D F
Sbjct: 1152 PSDAEMVLGNQIFKLGDRVTFVAAAGKVPIATRGTVVGISRTPTAL--LLDVVWDTSFMS 1209
Query: 1202 GVKI--RCSESRGYRMPAQAMINLSYGERLCGNS 1233
G + R RG + A +++N + + L +S
Sbjct: 1210 GTTVGERAPMFRGQTVTASSVLNTTNRQVLSASS 1243
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/146 (57%), Positives = 109/146 (74%), Gaps = 5/146 (3%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPN-DNDPHFRITEKQ 59
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + D FR++E++
Sbjct: 1 MGVPKFFRWLSERYPPISQLIAENRIPEFDCLYLDMNGIIHNCTHKDAGEDTTFRLSEEE 60
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+F IF+YIE LF I+P++LFFMAIDGVAPRAKMNQQR RRFR+A E E+ +KA ++G
Sbjct: 61 MFIRIFNYIEHLFGKIKPRQLFFMAIDGVAPRAKMNQQRARRFRTALEVEMAREKAIKEG 120
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMA 145
+P E+ FD C FMA
Sbjct: 121 VEMPKEEPFD----SNCITPGTAFMA 142
>gi|432111908|gb|ELK34946.1| 5'-3' exoribonuclease 1 [Myotis davidii]
Length = 1223
Score = 342 bits (876), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 225/626 (35%), Positives = 326/626 (52%), Gaps = 98/626 (15%)
Query: 398 GYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVF--------- 448
GYINE GYLNL RFEK+L KL+ FD E F E + D+++ E K+G K+ +
Sbjct: 136 GYINENGYLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFESKVGNKYLNEAAGVAAEEAR 195
Query: 449 -HKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQH 507
+KEK K + + A D + EE + ++ E DE EE F +EF Q+
Sbjct: 196 NYKEKKKSKGQENSICWAALDKN----REEAVTSKDHLE----DETEE-DDLFETEFRQY 246
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K+ V+ YYP+HYAP++SDI+
Sbjct: 247 KRTYYMTKMGVDIVSE------------------------------YYPYHYAPFLSDIR 276
Query: 568 DFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDL 627
+ S L + +E+G+PF+PF+QLLAVLPAASK LLP YQ+LMT E+SPI+EYYP +F TDL
Sbjct: 277 NISTLKIHFELGKPFMPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFKTDL 336
Query: 628 NGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGT--A 685
NGK+Q+WEAVVLIPFIDE +L++AM+ H L EER RN+H L+ Y T +
Sbjct: 337 NGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLMCWYDRDTEFTYPS 396
Query: 686 LAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLK-LYVTHFPTLKHVQFTHK 744
P+ FPAI K + D +V + K V+ K LY FPTLKH++ HK
Sbjct: 397 PWPEKFPAIERCRTRYKVISLDAWHV---DISKNKITRVDQKALYFCGFPTLKHIK--HK 451
Query: 745 IENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAV 801
+ V+VFQQ SR E++ I+V + S++ VA +LGK++F+N+PHL E RV +
Sbjct: 452 --KSGVQVFQQSSRGENMMLEILVNAESDELSVENVASLVLGKSVFVNWPHLEEARVVGI 509
Query: 802 ATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVE 861
+ ++ Y + G+ I T +VY Q +
Sbjct: 510 SDGET--------------------------------NYLRRKGIIINETSAVVYVQLLT 537
Query: 862 SRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFAL 920
+Y G+V ++ + + + + YQ+ V +++ KT+D++F P F L
Sbjct: 538 GHRYQINQNGEVRLEKQWSKQVLPFVYQAVVKDIRAFDSRFSNIKTLDDLFPPRSMVFML 597
Query: 921 SNPHYGSGGCVIST--VKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKL 978
P+YG G V + V E I++ F + EP+L L+ Q Y P Y +AS+L
Sbjct: 598 GTPYYGCAGEVQDSRDVITEGR-IRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRL 656
Query: 979 SISPLLLSRFTGSIFIIDSTEEGAKR 1004
+S L+SRFTGSIFI + A++
Sbjct: 657 GVSGYLVSRFTGSIFIGRGSRRNAEK 682
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 119/129 (92%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
Query: 121 RLPTEKRFD 129
LPTE RFD
Sbjct: 121 TLPTEARFD 129
Score = 117 bits (294), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 99/176 (56%), Gaps = 19/176 (10%)
Query: 1053 VFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSL 1112
V G+L + I++ + ++V +I++WLK P + C ++DA VV
Sbjct: 658 VSGYLVSRFTGSIFIGRG--SRRNAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAVVEK 715
Query: 1113 IEHAVDTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLG 1172
IE V+ + +E+Q + PD D +F+LFDRVVN+R+ ++VP+G
Sbjct: 716 IEEEVEKYKPLEQQ-----------------HGVIPDRDAEFRLFDRVVNVREDFSVPVG 758
Query: 1173 YRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
RGT+IGI D +++V+FD+ FP G+ IRCS RGYR+P A++NLSYG R
Sbjct: 759 LRGTVIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSYGSR 814
Score = 108 bits (269), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 56/67 (83%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE +KA EKGE LPTE RFD
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFD 129
Query: 191 SNCITPG 197
SNCITPG
Sbjct: 130 SNCITPG 136
>gi|313232494|emb|CBY24162.1| unnamed protein product [Oikopleura dioica]
Length = 853
Score = 340 bits (873), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 204/613 (33%), Positives = 310/613 (50%), Gaps = 100/613 (16%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK-------GERLP----TE 186
P+KL ++AIDG APRAKMNQQR RRFR+AKE+ L + EK G RLP +
Sbjct: 94 PRKLLYLAIDGPAPRAKMNQQRSRRFRAAKESVQLSELMAEKKLEIERAGGRLPPPDPKK 153
Query: 187 KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGE 246
++FDSNCITPGT FM RL + LR+++ ++ + W+++ VILS PGE
Sbjct: 154 EKFDSNCITPGTEFMDRLAKALRFYISERLNKEA---------GWQELNVILSDASVPGE 204
Query: 247 GEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFN----- 301
GEHKI+DYIR ++ P ++PN HC++G DADLIMLGL THEP F+++REE +
Sbjct: 205 GEHKIIDYIRKQRNTPTHDPNTHHCIWGADADLIMLGLATHEPNFTIVREEFVYGKPKPC 264
Query: 302 TKSNKGGSQIV----TPE-----------ETKFFLLHLSLMRDYLELEFGKLKEPGVLSF 346
+ G +++ PE + + + ++ +R+++ E L+ P +
Sbjct: 265 VLCGQCGHELIDCLGLPEGVEDKEPPVFSKGNYIFIRIATVREWIAQE---LQIPNI-PI 320
Query: 347 PFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYL 406
+ +ENIIDDW+L+ F +GNDF+P+LP L I GA+ L +Y+ + + Y+ + G +
Sbjct: 321 TWDLENIIDDWILLCFFVGNDFLPHLPSLSIREGAIDKLVGIYKRTVCEMKSYMTKDGTV 380
Query: 407 NLKRFEKFLTKLASFDFEQFREK--------------------------------YADIQ 434
NLK E + + + F+++ A
Sbjct: 381 NLKAVEFVMRSIGRMEDAIFKKRRQEECQRRVRDERRKHQDRNKRLNRNQVHQTPVAKSG 440
Query: 435 YLEGKMGKKFSDVFHKEKSKEMDPDLAA-------------LIKATDDDYDDGTEEVLNY 481
+E KM + H+ K+K D + A K D D + T L
Sbjct: 441 VMEPKMVNQ-----HQRKAKAHDLNKTARQIRQEAAEARLTAAKLEDQDTEQITLSALAK 495
Query: 482 ANYEEYYYSDE---DEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQ 538
A + +D D E F + K Y+ K D + N+ R Y +
Sbjct: 496 ARAMQARQNDNSALDAEDEVRLFED--GWKDRYFRTKFDVSADDNDFKRAVVGAYTEGLC 553
Query: 539 WNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEM-GEPFLPFQQLLAVLPAASK 597
W YY+ GC+ W WYYP+HYAP+ SD + + ++ +P P +QL+ V PA S
Sbjct: 554 WVFAYYFQGCLDWGWYYPYHYAPFASDFVHLDSVEINWQRDAKPRKPLEQLMCVFPAGSG 613
Query: 598 ELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEH 657
E LP ++ LM+ +S I++ YP +F DLNGKK +W V L+PF+DE +L + + V
Sbjct: 614 EFLPPSWRKLMSDPDSQIIDMYPTDFVVDLNGKKFEWMGVALLPFLDEARLHRTLAKVYG 673
Query: 658 LLTDEERSRNRHG 670
LT++E+ RN G
Sbjct: 674 DLTEDEKRRNGVG 686
>gi|313246745|emb|CBY35616.1| unnamed protein product [Oikopleura dioica]
Length = 853
Score = 340 bits (873), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 204/613 (33%), Positives = 310/613 (50%), Gaps = 100/613 (16%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK-------GERLP----TE 186
P+KL ++AIDG APRAKMNQQR RRFR+AKE+ L + EK G RLP +
Sbjct: 94 PRKLLYLAIDGPAPRAKMNQQRSRRFRAAKESVQLSELMAEKKLEIERAGGRLPPPDPKK 153
Query: 187 KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGE 246
++FDSNCITPGT FM RL + LR+++ ++ + W+++ VILS PGE
Sbjct: 154 EKFDSNCITPGTEFMDRLAKALRFYISERLNKEA---------GWQELNVILSDASVPGE 204
Query: 247 GEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFN----- 301
GEHKI+DYIR ++ P ++PN HC++G DADLIMLGL THEP F+++REE +
Sbjct: 205 GEHKIIDYIRKQRNTPTHDPNTHHCIWGADADLIMLGLATHEPNFTIVREEFVYGKPKPC 264
Query: 302 TKSNKGGSQIV----TPE-----------ETKFFLLHLSLMRDYLELEFGKLKEPGVLSF 346
+ G +++ PE + + + ++ +R+++ E L+ P +
Sbjct: 265 VLCGQCGHELIDCLGLPEGVEDKEPPVFLKGNYIFIRIATVREWIAQE---LQIPNI-PI 320
Query: 347 PFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYL 406
+ +ENIIDDW+L+ F +GNDF+P+LP L I GA+ L +Y+ + + Y+ + G +
Sbjct: 321 TWDLENIIDDWILLCFFVGNDFLPHLPSLSIREGAIDKLVGIYKRTVCEMKSYMTKDGTV 380
Query: 407 NLKRFEKFLTKLASFDFEQFREK--------------------------------YADIQ 434
NLK E + + + F+++ A
Sbjct: 381 NLKAVEFVMRSIGRMEDAIFKKRRQEECQRRVRDERRKHQDRNKRLNRNQVHQTPVAKSG 440
Query: 435 YLEGKMGKKFSDVFHKEKSKEMDPDLAA-------------LIKATDDDYDDGTEEVLNY 481
+E KM + H+ K+K D + A K D D + T L
Sbjct: 441 VMEPKMVNQ-----HQRKAKAHDLNKTARQIRQEAAEARLTAAKLEDQDTEQITLSALAK 495
Query: 482 ANYEEYYYSDE---DEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQ 538
A + +D D E F + K Y+ K D + N+ R Y +
Sbjct: 496 ARAMQARQNDNSALDAEDEVRLFED--GWKDRYFRTKFDVSADDNDFKRAVVGAYTEGLC 553
Query: 539 WNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEM-GEPFLPFQQLLAVLPAASK 597
W YY+ GC+ W WYYP+HYAP+ SD + + ++ +P P +QL+ V PA S
Sbjct: 554 WVFAYYFQGCLDWGWYYPYHYAPFASDFVHLDSVEINWQRDAKPRKPLEQLMCVFPAGSG 613
Query: 598 ELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEH 657
E LP ++ LM+ +S I++ YP +F DLNGKK +W V L+PF+DE +L + + V
Sbjct: 614 EFLPPSWRKLMSDPDSQIIDMYPTDFVVDLNGKKFEWMGVALLPFLDEARLHRTLAKVYG 673
Query: 658 LLTDEERSRNRHG 670
LT++E+ RN G
Sbjct: 674 DLTEDEKRRNGVG 686
>gi|440293117|gb|ELP86279.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 881
Score = 340 bits (871), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 214/578 (37%), Positives = 322/578 (55%), Gaps = 58/578 (10%)
Query: 126 KRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT 185
KR+ + P+KL +MA+DGVAPRAKMNQQR RRF++A++A+ E+ ++K L
Sbjct: 76 KRYLDYIIDIVRPRKLVYMAVDGVAPRAKMNQQRARRFKAARDAQSKEEYDEQKNITLIQ 135
Query: 186 EKR--------FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVI 237
+ DSNCITPGT FM R+ + L+ +VK +I+T WK + VI
Sbjct: 136 QGHSPIAIKPTLDSNCITPGTVFMERVTETLKEYVKERISTSAYWKK---------LVVI 186
Query: 238 LSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE 297
+S PGEGEHKIM+YIR K +P+YNPN+ HC+YGLDADLIML L THE FS++RE+
Sbjct: 187 ISDASVPGEGEHKIMEYIRKQKDQPNYNPNIHHCIYGLDADLIMLTLATHERKFSIIREQ 246
Query: 298 VKF---------------NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPG 342
V F + S+KG + P F LH ++R+YL K
Sbjct: 247 VFFEHVPCYICGQQGHAPDRCSHKGEIGAMDPIRKPFLFLHCHILREYLS------KTIR 300
Query: 343 VLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINE 402
+ F F E IIDD++ F +GNDF+P+ P L I G++ +L +VY + LP +GY+ +
Sbjct: 301 IEGFDF--ERIIDDFIFFCFFVGNDFLPHSPSLEIREGSIDMLMEVYMKFLPE-NGYLTD 357
Query: 403 GGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGK--KFSDVFHKEKSKEMDPDL 460
G LN + F++ + RE+ + L+ K K +F + +E D +
Sbjct: 358 SGTLNATHAKNFMSLVGQ------REQ----RILQSKSEKESRFRINRKGKMIREFDDKI 407
Query: 461 AALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAK 520
+A++ + +D + + E + E EE +S G ++ YY KL +
Sbjct: 408 SAVLGSGEDQAIKDLKLKHLKLDKENFLKGIEKEESEDINYSMNG-YQAKYYASKLK-IE 465
Query: 521 VTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF--SHLNLKYEM 578
+E + Y + W L YYY GC W WY+P+ YAP+I+D+ + + L K+E+
Sbjct: 466 YPSEAMTQLVNEYFIGLSWVLKYYYQGCQCWDWYFPYLYAPFIADVATYLDNTLEPKFEL 525
Query: 579 GEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVV 638
G PF P +QL++VLP SKE +P ++++M SPI E+YPE+FA D+NGK Q++ AV+
Sbjct: 526 GIPFKPVEQLMSVLPPRSKECVPMLFRDIMNSTTSPIKEFYPEKFAIDMNGKTQEYLAVI 585
Query: 639 LIPFIDEVKLIKAMDAVEHLLTDEERSRN-RHGPMLVY 675
L+ FID+ KL++ + +E L +E RN R G L++
Sbjct: 586 LLSFIDQNKLLEVLKPLEKQLQGQEFKRNMRWGESLIF 623
Score = 104 bits (259), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 81/131 (61%), Gaps = 15/131 (11%)
Query: 1 MGVPKFFRYISERYPCLSEVVR--------EYQIP-----EFDNLYLDMNGIIHNCSHPN 47
MGVP FFR++ ++YP + + + + P E DN YLDMNG+IH C HP
Sbjct: 1 MGVPSFFRWLEKKYPKIIDACQGSNKTDHTDLDSPNLNGFEIDNFYLDMNGLIHPCFHPQ 60
Query: 48 DNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE 107
D I + I + Y++ + +++P+KL +MA+DGVAPRAKMNQQR RRF++A++
Sbjct: 61 DRPAPDTIDDMLIM--LKRYLDYIIDIVRPRKLVYMAVDGVAPRAKMNQQRARRFKAARD 118
Query: 108 AEVLEQKAKEK 118
A+ E+ ++K
Sbjct: 119 AQSKEEYDEQK 129
>gi|32398787|emb|CAD98497.1| exonuclease ii, possible [Cryptosporidium parvum]
Length = 1572
Score = 339 bits (870), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 231/748 (30%), Positives = 355/748 (47%), Gaps = 177/748 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+ +F+R+ISERYP ++E + + GII P DN
Sbjct: 1 MGISRFYRWISERYPQINEEISD--------------GIIP----PFDN----------- 31
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+A N R+ L EKG
Sbjct: 32 --------------------LYLDVNGIA----HNSVNSSEMRTPSNGINLS----EKGS 63
Query: 121 RLPTEKRFDFIT--LKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F +I + P+KL ++A+DGVAPRAKMNQQR RRFRSA+++E L++ K
Sbjct: 64 PEIWAAIFRYINKLVYIAKPRKLLYIAVDGVAPRAKMNQQRSRRFRSARDSEFLKKMEKN 123
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
FDSNCITPGT FM L +QL +F+ +I TD LWK + V+L
Sbjct: 124 NSIDTTQNNVFDSNCITPGTTFMHELRRQLEFFIYHQIHTDPLWKH---------LEVVL 174
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SG + PGEGEHKIMD+IR +KS+ DYN N HCLYGLDADLIML L +HEP+FSLLREE+
Sbjct: 175 SGADVPGEGEHKIMDFIRCIKSQRDYNNNTTHCLYGLDADLIMLSLASHEPHFSLLREEI 234
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFG----KLKEPGV-LSFPFSIEN- 352
KF++ N + T E +F LH+S++RDY+ + ++E + + F ++N
Sbjct: 235 KFSSSRNYESRTVCTKERFQF--LHISILRDYIINDLNPRNLSVEELNLCFGYKFGLKND 292
Query: 353 -----------------IIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPT 395
+IDD++++GF++GNDF+P++P H ++ L + Y++ L
Sbjct: 293 SQDQISIFDNVLIDGERLIDDFIILGFIVGNDFLPHIP-FHTVDQGLARIISSYRKYLAH 351
Query: 396 L--------DGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKM---GKKF 444
+ + G +N +FL + E+ ++ ++ Y + + K
Sbjct: 352 FFLMKLSSSPWILEDCGRINYVNLLRFLIWHIISEKEEAEKRISNPDYWKKVIPDQNKIS 411
Query: 445 SDV-----FHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNY--------ANYEEYYYSD 491
SD F K S E D A + +++ EV+ + N ++++ +
Sbjct: 412 SDSIGVPRFMKSDSIEQDKFRAKWQETRPENF-----EVMRWRYYFVKMAINIDKFFPEN 466
Query: 492 EDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSW 551
+ + + N S + ++T + D CY+ +QW +YY+ G SW
Sbjct: 467 SNVQNQANIKSNTNSN------------RITTNSIEDIVFCYLEGLQWVSYYYFRGVPSW 514
Query: 552 SWYYPHHYAPYISDIK---------------------------------------DFSHL 572
WYYP+ YAP+ DI + + L
Sbjct: 515 RWYYPYRYAPFACDIAIILSCWLQNKSISTLSRDDIVKYGSSKLMFVHTMYSEEIELNGL 574
Query: 573 NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQ 632
++ G P PF+QL+ VLP+ SK+LLP+P++ L T NSP+L +YP F D+ G K
Sbjct: 575 AFRFIKGNPLQPFEQLMGVLPSNSKDLLPKPFRKLFTNPNSPLLSFYPANFEVDMEGVKV 634
Query: 633 DWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
W V LIPFIDE L +D++ ++L+
Sbjct: 635 PWGGVTLIPFIDEFLL---LDSITYVLS 659
>gi|66475504|ref|XP_627568.1| Kem1p-like 5'-3' exonuclease [Cryptosporidium parvum Iowa II]
gi|46229016|gb|EAK89865.1| Kem1p-like 5'-3' exonuclease [Cryptosporidium parvum Iowa II]
Length = 1588
Score = 339 bits (870), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 231/748 (30%), Positives = 355/748 (47%), Gaps = 177/748 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+ +F+R+ISERYP ++E + + GII P DN
Sbjct: 1 MGISRFYRWISERYPQINEEISD--------------GIIP----PFDN----------- 31
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+A N R+ L EKG
Sbjct: 32 --------------------LYLDVNGIA----HNSVNSSEMRTPSNGINLS----EKGS 63
Query: 121 RLPTEKRFDFIT--LKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F +I + P+KL ++A+DGVAPRAKMNQQR RRFRSA+++E L++ K
Sbjct: 64 PEIWAAIFRYINKLVYIAKPRKLLYIAVDGVAPRAKMNQQRSRRFRSARDSEFLKKMEKN 123
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
FDSNCITPGT FM L +QL +F+ +I TD LWK + V+L
Sbjct: 124 NSIDTTQNNVFDSNCITPGTTFMHELRRQLEFFIYHQIHTDPLWKH---------LEVVL 174
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SG + PGEGEHKIMD+IR +KS+ DYN N HCLYGLDADLIML L +HEP+FSLLREE+
Sbjct: 175 SGADVPGEGEHKIMDFIRCIKSQRDYNNNTTHCLYGLDADLIMLSLASHEPHFSLLREEI 234
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFG----KLKEPGV-LSFPFSIEN- 352
KF++ N + T E +F LH+S++RDY+ + ++E + + F ++N
Sbjct: 235 KFSSSRNYESRTVCTKERFQF--LHISILRDYIINDLNPRNLSVEELNLCFGYKFGLKND 292
Query: 353 -----------------IIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPT 395
+IDD++++GF++GNDF+P++P H ++ L + Y++ L
Sbjct: 293 SQDQISIFDNVLIDGERLIDDFIILGFIVGNDFLPHIP-FHTVDQGLARIISSYRKYLAH 351
Query: 396 L--------DGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKM---GKKF 444
+ + G +N +FL + E+ ++ ++ Y + + K
Sbjct: 352 FFLMKLSSSPWILEDCGRINYVNLLRFLIWHIISEKEEAEKRISNPDYWKKVIPDQNKIS 411
Query: 445 SDV-----FHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNY--------ANYEEYYYSD 491
SD F K S E D A + +++ EV+ + N ++++ +
Sbjct: 412 SDSIGVPRFMKSDSIEQDKFRAKWQETRPENF-----EVMRWRYYFVKMAINIDKFFPEN 466
Query: 492 EDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSW 551
+ + + N S + ++T + D CY+ +QW +YY+ G SW
Sbjct: 467 SNVQNQANIKSNTNSN------------RITTNSIEDIVFCYLEGLQWVSYYYFRGVPSW 514
Query: 552 SWYYPHHYAPYISDIK---------------------------------------DFSHL 572
WYYP+ YAP+ DI + + L
Sbjct: 515 RWYYPYRYAPFACDIAIILSCWLQNKSISTLSRDDIVKYGSSKLMFVHTMYSEEIELNGL 574
Query: 573 NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQ 632
++ G P PF+QL+ VLP+ SK+LLP+P++ L T NSP+L +YP F D+ G K
Sbjct: 575 AFRFIKGNPLQPFEQLMGVLPSNSKDLLPKPFRKLFTNPNSPLLSFYPANFEVDMEGVKV 634
Query: 633 DWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
W V LIPFIDE L +D++ ++L+
Sbjct: 635 PWGGVTLIPFIDEFLL---LDSITYVLS 659
>gi|429329440|gb|AFZ81199.1| 5'->3' exoribonuclease, putative [Babesia equi]
Length = 828
Score = 339 bits (870), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 216/626 (34%), Positives = 337/626 (53%), Gaps = 94/626 (15%)
Query: 112 EQKAKEKGERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA 169
E + + E + E FD+I F P+K+ F+AIDGVAPRAK+NQQR RRF+SA +A
Sbjct: 69 ENMEQPESEEVMFECIFDYIDRIFYIVRPRKIMFLAIDGVAPRAKINQQRSRRFKSAADA 128
Query: 170 EV--------LEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
++ +E+ K+KG+ + ++DSN ITPGTPFM L +++ +++ +I
Sbjct: 129 DLEDEVYNKLVEEFGKKKGDIPIRKDKWDSNVITPGTPFMHELSKRIVDYIQDRIEKYD- 187
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
WK + VI S PGEGEHKIM +IR + P+Y+PN +H L+G+DADLIM
Sbjct: 188 --------AWKRITVIFSDSGVPGEGEHKIMKFIRNQRHAPNYDPNTKHVLHGMDADLIM 239
Query: 282 LGLCTHEPYFSLLREEV----KFNTKSNKGG----SQIVTPEETK--------------- 318
LGL THE F +LRE V F + N ++ V P+E
Sbjct: 240 LGLATHEVNFFILREIVTNFINFKPEDNVANQIEQAKSVVPKEKPTSSHQQYISLMRQSW 299
Query: 319 --FFLLHLSLMRDYL--ELEF--GKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
L L ++R+YL +L F G GV+ F E +DD VLM F GNDF+P+L
Sbjct: 300 KPMQFLQLPVLREYLSYQLHFPNGWRDREGVIDF----ERCVDDLVLMCFFCGNDFLPHL 355
Query: 373 PDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
P + I G++ + +YQ++LP L Y++ G LN+ + F++ L+ + + F++
Sbjct: 356 PSISITGGSIDQMILLYQKILPDLGDYLSNEGDLNMPQVGSFVSYLSKIENQVFKQAQEH 415
Query: 433 IQYLEGKMGK-------KFSDVFHKEKSKEMDPDLAALIKATDDDYDDG-----TEEVLN 480
+ + KM + +F +V K++++D D +A ++ ++ Y + EE+L
Sbjct: 416 KERYKRKMQQNGNSEIAQFGNV---NKNRKLD-DGSASVEPKEEGYTEAEFKRRQEEILK 471
Query: 481 YANYEEYYYSDEDEE----------WRTNFFSE-FGQHKTDYYHYKLDYAKVTNEVLRDQ 529
+E D E W+ ++ E F D D + N V+
Sbjct: 472 ----QERTVEDPKEPIDLSLNDPKLWKEAYYREKFNLGPND------DVTSLVNNVVFH- 520
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
Y+ + W L YYY GCVSW W+YP HYAP+ SD+K F L++K+E+G+PF FQQL+
Sbjct: 521 ---YVEGLAWVLKYYYQGCVSWGWFYPFHYAPFCSDLK-FEGLDIKFELGKPFTAFQQLM 576
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
+V+P S LP+ ++ LMT NSP+ ++YP +F D NGK+ ++ V L+PFIDE +L+
Sbjct: 577 SVMPIRSSHCLPKEFRELMTDSNSPLADFYPLKFKEDPNGKRYKYQWVALLPFIDEKRLL 636
Query: 650 KAMDAVEHLLTDEERSRNRHGPMLVY 675
++ +E L+ ++ RN L++
Sbjct: 637 NIVEPIEKSLSKVDKDRNAISKDLIF 662
Score = 112 bits (281), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 94/157 (59%), Gaps = 35/157 (22%)
Query: 1 MGVPKFFRYISERYPCL-SEVVREYQIP---------------------EFDNLYLDMNG 38
MGVP F+R++ RYP + + + Y+ EFDNLYLDMNG
Sbjct: 1 MGVPTFYRWLCNRYPRVPKDTIDNYKETSIDMSNIETIGVDLLSPNPNGEFDNLYLDMNG 60
Query: 39 IIHNCSHP-NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQ 97
IIH C HP N P +E+ +F+ IF YI+ +F +++P+K+ F+AIDGVAPRAK+NQQ
Sbjct: 61 IIHPCCHPENMEQPE---SEEVMFECIFDYIDRIFYIVRPRKIMFLAIDGVAPRAKINQQ 117
Query: 98 RGRRFRSAKEAE--------VLEQKAKEKGERLPTEK 126
R RRF+SA +A+ ++E+ K+KG+ +P K
Sbjct: 118 RSRRFKSAADADLEDEVYNKLVEEFGKKKGD-IPIRK 153
>gi|84996629|ref|XP_953036.1| exoribonuclease (XRN family member) [Theileria annulata strain
Ankara]
gi|65304032|emb|CAI76411.1| exoribonuclease (XRN family member), putative [Theileria annulata]
Length = 937
Score = 337 bits (865), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 247/774 (31%), Positives = 361/774 (46%), Gaps = 171/774 (22%)
Query: 1 MGVPKFFRYISERYPCLS----------------------EVVREYQIPEFDNLYLDMNG 38
MGVP F+R++ RYP + E++++ EFDNLYLDMNG
Sbjct: 1 MGVPTFYRWLCNRYPRVPKDVIDNYNERNLDLSDEDAIGLELLKDNPNGEFDNLYLDMNG 60
Query: 39 IIHNCSHP-NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQ 97
IIH C HP N P TE+ +F I Y++ ++FFM V PR
Sbjct: 61 IIHPCCHPENMEQPQ---TEELMFNCILDYLD---------RIFFM----VRPRK----- 99
Query: 98 RGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQ 157
I L + IDGVAPRAK+NQ
Sbjct: 100 --------------------------------LIYLAIGNVNHDIIIFIDGVAPRAKINQ 127
Query: 158 QRGRRFRSAKEAEVLEQ----------KAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQ 207
QR RRF+SA A++ ++ K K + + ++DSN ITPGT FM +L ++
Sbjct: 128 QRSRRFKSAALADLEDETYDTLIKDYEKRYGKTNLIVRKSKWDSNVITPGTEFMYKLSEK 187
Query: 208 LRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPN 267
L +++ +I WK + VI S PGEGEHKIM +IR + PDY+PN
Sbjct: 188 LIEYIEDRIEKYD---------AWKIIVVIFSDSNVPGEGEHKIMKFIRNQRHCPDYDPN 238
Query: 268 MRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF--NTKSNKGGSQIV-----------TP 314
RH L+G+DADLIMLGL THEP F +LRE V F N +N I T
Sbjct: 239 TRHVLHGMDADLIMLGLATHEPNFFILREIVTFFSNPTTNNSEKAIANTIDTVSKTQNTT 298
Query: 315 EETKFFLLHLSLMRD------YLELEFGKLKEPGVLSFPFSIEN--------IIDDWVLM 360
+ + ++ +MR+ +L+L + L FP EN IDD VLM
Sbjct: 299 QSSGDVEKYMKMMRENWKPLQFLQLPVLREYLSHQLRFPLGFENGEMVDFERCIDDLVLM 358
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F GNDF+PNLP + I G++ + +YQ++LPTL+ Y+++ G LN +F L+
Sbjct: 359 IFFCGNDFLPNLPSISITGGSIDQMLLLYQKILPTLEDYLSDEGRLNFHTITQFFELLSK 418
Query: 421 FDFEQFRE------KYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDG 474
+ E F+ K + + + K +D ++ D I +D +
Sbjct: 419 IEDETFKNIHEFKIKSQNRRQNDDSNSKVTNDSGGNSEANSSDKGGEERI---EDKFMKE 475
Query: 475 TEEVLNYANYEEYYYSDEDEEWRTNF-FSEFGQHKTDYYHYKLDYAKVTNEVLRDQAEC- 532
+E +N +N ++ D + + ++ K YY K + T E + +
Sbjct: 476 LKEKMNSSNVKD------DVKLPVDVTLNDPKLWKEAYYREKFNLGDKTPEEIEKFVQKL 529
Query: 533 ---YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK-----------------DFSHL 572
YI+ I W L YYY GC SWSWYY +HY+P+ SD+ D S+L
Sbjct: 530 SFDYIKGICWVLQYYYQGCPSWSWYYRYHYSPFCSDLNFSGIQSPEDYSCESVKDDESNL 589
Query: 573 N------------LKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYP 620
+K+++ P PFQQL+ V+P S +PE + LMT +SP+ E+YP
Sbjct: 590 KRRHNTLETGVKMIKFDLDVPLTPFQQLMGVMPIRSSHCIPEKLRTLMTDVDSPLREFYP 649
Query: 621 EEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLV 674
+F D NGK+ ++ V L+PFIDE KL+K + +E L++EE+ RNR L+
Sbjct: 650 TKFREDPNGKRYKYQWVALLPFIDEKKLLKHVKPIEDELSEEEKVRNRTSNNLI 703
>gi|145505349|ref|XP_001438641.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405813|emb|CAK71244.1| unnamed protein product [Paramecium tetraurelia]
Length = 773
Score = 337 bits (864), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 207/589 (35%), Positives = 312/589 (52%), Gaps = 78/589 (13%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK-----------GERLPT- 185
PK+L +MAIDGVAPRAK+NQQR RRFR+A+E+ + QK KE+ + L T
Sbjct: 84 PKELIYMAIDGVAPRAKLNQQRSRRFRAAQES-IRIQKEKERLRDYWRTQGLNSDALNTY 142
Query: 186 -EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETP 244
EK FDSN ITPGT FM +L+ L+Y++ ++ + L+++ L +I + P
Sbjct: 143 IEKNFDSNQITPGTEFMQKLNIALQYYIYDRMNNNPLFRNVL---------IIFNDSSIP 193
Query: 245 GEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKS 304
GEGEHKI+ ++R + + +Y +RHCLYG DADLIMLGL THEPYF ++RE + N
Sbjct: 194 GEGEHKILQFVRDQRRQMNYK-TVRHCLYGADADLIMLGLSTHEPYFYVIRETIMANDDK 252
Query: 305 NKGGSQ-----------------------IVTPEETKFFLLHLSLMRDYLELEFGKLKEP 341
Q + F +L L+++R++L E L+
Sbjct: 253 QCSICQQKGHFFTDCKKREKQYNQIQQQQKNKLIQVDFQILQLNIVREFLYFETRDLQ-- 310
Query: 342 GVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYIN 401
L + +E IIDD+V M FL+GNDF+P++P L I G + L +Y+ +L + Y+
Sbjct: 311 ASLKGQYDLERIIDDFVFMCFLVGNDFLPHIPCLKITEGGIDCLLIIYKTILSQIGDYLT 370
Query: 402 EGGYLNLKRFEKFLTKLASFDFEQF-------------REKYADIQYLEGKMGKKFSDVF 448
G LNL++ +FL + + E RE+ A+++ + M +FS V
Sbjct: 371 NCGELNLQQMNQFLFHVGLIEDELIKGQEKKKEIVKNRRERNAEMKEQKVLMAPEFSIV- 429
Query: 449 HKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHK 508
+ KE+ L+ A D + ++ ++ A + S E ++W+ +K
Sbjct: 430 --DTQKEI---LSKFKSALKDKLTEINQQEIDQAQSAKS--SQELKKWKA------VSYK 476
Query: 509 TDYYHYKLDYAKVT-NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
YY K NE Y+ A+ W L YYY GCV W W+YP+HYAP+ D+
Sbjct: 477 QRYYQEKFGIKPAQFNEFQHRIKISYLEALAWTLKYYYQGCVDWGWFYPYHYAPFAQDLT 536
Query: 568 DFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDL 627
+ ++ + PF P+QQLLAVLP S + LP PYQ LM +SPI ++YP +F DL
Sbjct: 537 NLDQCLFEFSLNTPFKPYQQLLAVLPPQSAQFLPRPYQQLMLETSSPIADFYPTDFVVDL 596
Query: 628 NGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
GKK W V++PF+D +LIKA + + L+ E+ R+R G L+++
Sbjct: 597 KGKKFAWLGEVVLPFVDADRLIKASN-IGVSLSKLEQERDRLGQTLIFS 644
Score = 124 bits (310), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 87/125 (69%), Gaps = 8/125 (6%)
Query: 1 MGVPKFFRYISERYP-CLSEVVR---EYQI---PEFDNLYLDMNGIIHNCSHPNDNDPHF 53
MGVP FFR++ R P L EV+ E + P+ DNLYLDMNGIIH CSHP+
Sbjct: 1 MGVPAFFRWLCARNPKALLEVLENSDESSLSNNPDIDNLYLDMNGIIHPCSHPDQGGIPI 60
Query: 54 RITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQ 113
+T +F ++FHYI+ L +++PK+L +MAIDGVAPRAK+NQQR RRFR+A+E+ + Q
Sbjct: 61 PVTYDDMFVNVFHYIDRLVDIVRPKELIYMAIDGVAPRAKLNQQRSRRFRAAQES-IRIQ 119
Query: 114 KAKEK 118
K KE+
Sbjct: 120 KEKER 124
>gi|440293121|gb|ELP86283.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 782
Score = 337 bits (863), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 233/707 (32%), Positives = 364/707 (51%), Gaps = 123/707 (17%)
Query: 28 EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDG 87
E DN YLDMNG+IH C HP D I + I + Y++ + +++P+KL +MA+DG
Sbjct: 22 EIDNFYLDMNGLIHPCFHPQDRPAPDTIDDMLIM--LKRYLDYIIDIVRPRKLVYMAVDG 79
Query: 88 VAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAID 147
VAPRAKMNQQR RRF++A++
Sbjct: 80 VAPRAKMNQQRARRFKAARD---------------------------------------- 99
Query: 148 GVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKR-FDSNCITPGTPFMCRLHQ 206
++ F + + A+ L KG LP K+ DSNCITPGT FM R+ +
Sbjct: 100 ---------KKSAMDFEAQQAADAL-----AKGTPLPASKKEMDSNCITPGTVFMDRVIE 145
Query: 207 QLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNP 266
L+ +VK +I+T WK + VI+S PGEGEHKIM+YIR K +P+YNP
Sbjct: 146 TLKAYVKERISTSAY---------WKKLVVIISDSSVPGEGEHKIMEYIRKQKDQPNYNP 196
Query: 267 NMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN-KGGSQIVT------------ 313
N+ HC+YGLDADLIML L THE F ++RE+V NTK GG+ V
Sbjct: 197 NLNHCIYGLDADLIMLTLATHERNFFVIREDV-LNTKCYICGGAHPVAFCPKKNEINPMD 255
Query: 314 PEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLP 373
P F + + +R + L G + PG + E IIDD++ + F IGNDF+P+ P
Sbjct: 256 PINKPFVFVSILDVRKLIYL-LGMV--PG-----YDFERIIDDFIFLCFFIGNDFLPHSP 307
Query: 374 DLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADI 433
L I + + L+ ++Y+E L +GY+ + G L++ F+ LT L+ + + + A+
Sbjct: 308 SLEIYHEDISLIMELYKEFL-LKNGYVTDAGNLDMAAFKNLLTFLSRNESGRLID-VANK 365
Query: 434 QYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKAT----DDDYDDGTEEVL-NYANYEEYY 488
+ +E + + VF K+ L+A+ +A ++++ T+E + + E
Sbjct: 366 KRMETTISS--NHVFRKQ--------LSAIAEAKANKQTEEFEKLTKEFTESKLKFNEMI 415
Query: 489 YSDEDEEWRTNFFSEFGQHKTDYYHYKL--DYAKVTNEVLRDQAECYIRAIQWNLHYYYN 546
+ + E + + + YY+ KL D K +V + Y++ + W L YYY
Sbjct: 416 FGGDVEYDKPGY-------EERYYNSKLHIDIVKEPKKV-EELVHEYVKGLVWVLKYYYQ 467
Query: 547 GCVSWSWYYPHHYAPYISDI-KDFSH-LNLKYEMGEPFLPFQQLLAVLPAASKELLPEPY 604
GC W W++PH+YAP+I+D+ K F + N+ ++ EP P +QL++VLP SK+ +P+
Sbjct: 468 GCKGWGWFFPHNYAPFITDMAKYFDYTWNITFDFEEPSTPVEQLMSVLPPFSKKCVPKSC 527
Query: 605 QNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEER 664
+ L+ E SP+ E+YPE F D +G ++ VVL+PFI+ KL+K + +E +++
Sbjct: 528 RALLNSETSPLKEFYPETFQIDFDGYAVEYLGVVLLPFIERPKLLKYLRPIEDAFVGDDK 587
Query: 665 SRNR-HGPMLVYTYSN----VNLGTALAPDYFPAINENHAVEKPLYR 706
RN+ G +Y Y N N+G A D +N ++K LY+
Sbjct: 588 ERNKASGVAHIYFYRNNPLFKNIGQAYTKDPIKHLNHLKDLDK-LYK 633
>gi|294884783|gb|ADF47407.1| exoribonuclease-2, partial [Dugesia japonica]
Length = 801
Score = 337 bits (863), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 199/559 (35%), Positives = 288/559 (51%), Gaps = 106/559 (18%)
Query: 187 KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGE 246
+ FDSNCITPGTPFM RL L+Y+V K+ +D WK++ VILS PGE
Sbjct: 11 EHFDSNCITPGTPFMARLTIALQYYVYNKLNSDP---------GWKNIQVILSDANAPGE 61
Query: 247 GEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK------- 299
GEHKIMDYIR ++ P ++PN +HCL G DADLIMLGL THEPYF+++REE K
Sbjct: 62 GEHKIMDYIRRQRASPTHDPNTKHCLCGADADLIMLGLATHEPYFTIIREEFKPNQPRPC 121
Query: 300 --------------------FNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLK 339
FN +N GS ET+F +HL+ +R+YL+ E L
Sbjct: 122 EICGQMDHVMTECAGLPSAEFNIAANNKGS------ETEFIFIHLNTLREYLQQE---LV 172
Query: 340 EPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGY 399
P L F + E +DDWV M F +GNDF+P+LP L I A+ L +Y+ + +G+
Sbjct: 173 IPN-LHFQYDFERAVDDWVFMCFFVGNDFLPHLPSLEIREKAIDRLITIYKSSVSKTNGW 231
Query: 400 INEGGYLNLKRFEKFLTKLASFDFEQFREKYAD--------------------------- 432
+ + G +N+ R + + LA + E F+ + +
Sbjct: 232 LTDSGKVNISRVQLIMKDLALLEDEIFKNRRENEVSFRRRNRENRNRTKRQKLNENAMFN 291
Query: 433 ---IQYLEGKMGKKFS-DVFHKEK--------SKEMDPDL------AALIKATDDDYDDG 474
++ G++FS D F +K++ P + A + DDD D
Sbjct: 292 QHSTDFVNLSSGERFSRDSFKNNAIMESKNNLNKQVGPQVPASNTRAPAKRKFDDDID-- 349
Query: 475 TEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTN-EVLRDQAECY 533
E+ N EE DE + W + ++ YY K + N + + A Y
Sbjct: 350 PEDKKN----EELDKRDEVKLWEDGY-------RSRYYQSKFGVSVDENPDFCVNVAHQY 398
Query: 534 IRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYE-MGEPFLPFQQLLAVL 592
+R + W L YYY GCVSW+WYYP+HYAP+ D + S ++ +E +PF P +QL+ V
Sbjct: 399 LRGLCWVLAYYYQGCVSWTWYYPYHYAPFAVDFVNLSEADVTFEKKTKPFNPLEQLMGVF 458
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAM 652
PA SK +P +Q+LMT SP+++ YP F DLNGK+ DW V L+PF+DEV+L++ +
Sbjct: 459 PADSKSHVPPVWQDLMTDSESPVIDLYPTNFKIDLNGKRYDWMGVALLPFVDEVRLLQVL 518
Query: 653 DAVEHLLTDEERSRNRHGP 671
+LT++E+ RN GP
Sbjct: 519 KERYSMLTEDEKERNVIGP 537
>gi|209877046|ref|XP_002139965.1| 5'-3' exoribonuclease [Cryptosporidium muris RN66]
gi|209555571|gb|EEA05616.1| 5'-3' exoribonuclease, putative [Cryptosporidium muris RN66]
Length = 1148
Score = 336 bits (862), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 254/857 (29%), Positives = 380/857 (44%), Gaps = 266/857 (31%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE------------YQIP----EFDNLYLDMNGIIHNCS 44
MGVP F++++ RYP + ++E +P EFD LYLDMNGIIH C
Sbjct: 1 MGVPTFYKWLCSRYPLIVRSLKESITEDNVNSKIDLTLPSENGEFDCLYLDMNGIIHPCC 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
+P I +AP
Sbjct: 61 NP--------------------------------------ISSIAP-------------- 68
Query: 105 AKEAEVLEQKAKEKGERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRR 162
EAE+ + D+I F P++L ++AIDGVAPRAKMNQQR RR
Sbjct: 69 INEAEMFTRVC-------------DYIDRLFSMIRPRRLLYLAIDGVAPRAKMNQQRSRR 115
Query: 163 FRSAKEAEVLEQ---KAKEKGERL-----PTEKRFDSNCITPGTPFMCRLHQQLRYFVKL 214
++++ E E L Q +AK++ E+L P ++++DSN ITPGTPFM RL L+ +++
Sbjct: 116 YKTSMEIENLMQAYSEAKQEFEKLGYKCPPYKEKWDSNLITPGTPFMERLSACLQVYIRQ 175
Query: 215 KITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYG 274
K ++ WK TLS VI S PGEGEHKI+D+IR + +Y+PN RH LYG
Sbjct: 176 KYESEPAWK-TLS--------VIFSDANIPGEGEHKILDFIRKQRCNSNYDPNTRHVLYG 226
Query: 275 LDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIV---------------------- 312
DADLIMLGL THE F ++RE + ++ G SQI
Sbjct: 227 ADADLIMLGLSTHEQNFFIVRESI----TNDDGASQICHLYNKLLTENSIDKSVNANNRI 282
Query: 313 --TPEETKFF----------LLHLSLMRDYLELEFGKLKEPGVLS--------------- 345
P + ++ LS++R+YL EF +L+E ++
Sbjct: 283 RFGPNNSSNLRIYSWWKDLEMIDLSVLREYLAYEFKELEEKLSINREKYIENSNNPECTI 342
Query: 346 ------------------------FPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGA 381
F + +E IDD+V + F +GNDF+PNLP I G+
Sbjct: 343 STEIHEQDNNMKYSKINEKLYNSKFYYDLERCIDDFVFLCFFVGNDFLPNLPAFGIHKGS 402
Query: 382 LPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFRE--KYADIQYLEGK 439
L L +Y +VLPTL YI G +N+K F L + + +E ++ + + K
Sbjct: 403 LDQLLAIYIKVLPTLGDYITWEGNINVKSIGLFFFYLKDLELDVLKEDTRFNNRNNISNK 462
Query: 440 MGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYA-NYEEYYYSD------- 491
K D+F K K +D + D ++D +L + N E Y +D
Sbjct: 463 DQK---DIFSKPK---IDVNKVKF-NGIDAYFNDHVNRILQFKDNNCETYMTDKVRLGDG 515
Query: 492 EDEEWRTNFFS-------------EFGQHKTDYYHYKLDYAKVTN-------EVLRDQAE 531
+ + WR ++S + Q +T + +D + N E R+
Sbjct: 516 DVDIWRLRYYSIKFKLDLLVLNLKDINQDETIENNLDIDKETIDNNLYQKLSEFSREVGY 575
Query: 532 CYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLK---------------- 575
YIR + W L YYY+G SW W+YP+HYAP + D+ + + +L+
Sbjct: 576 HYIRGLSWVLKYYYHGVPSWDWFYPYHYAPLVVDLANMAASDLRKIGIKDVSIPDTIIKS 635
Query: 576 -----------------------------------YEMGEPFLPFQQLLAVLPAAS-KEL 599
+ G PF P+QQL+AVLP S K+
Sbjct: 636 VNICDGDSNNICNENELSVNSNTFNFSIENAILAPFSQGVPFSPYQQLMAVLPPNSGKKC 695
Query: 600 LPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLL 659
LP +M+ E SP+ E+YP++F D NG KQ W+ +VL+PFI++ KL++ + +E +
Sbjct: 696 LPFKLYQMMSDEKSPLKEFYPDKFKEDPNGNKQRWKWIVLLPFINQEKLLEHVKPLEVHI 755
Query: 660 TDEERSRNRHGPMLVYT 676
+D ++ RNRHG ++YT
Sbjct: 756 SDIDKIRNRHGMNIIYT 772
>gi|160331478|ref|XP_001712446.1| dhm [Hemiselmis andersenii]
gi|159765894|gb|ABW98121.1| dhm [Hemiselmis andersenii]
Length = 553
Score = 336 bits (862), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 219/553 (39%), Positives = 301/553 (54%), Gaps = 93/553 (16%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTE-KRFDSNCITP 196
P+KL ++AIDGVAPRAKMNQQR RRFRS KE E ++ E + E FDSNCITP
Sbjct: 73 PRKLIYLAIDGVAPRAKMNQQRSRRFRSVKELEKIKTVVNETSKLSKNEISFFDSNCITP 132
Query: 197 GTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIR 256
GT FM L + +++ KI D W+ VI SG E PGEGEHKIM+YIR
Sbjct: 133 GTEFMKNLSFSFKKWLENKIKFDPEWQQGCD--------VIFSGSEVPGEGEHKIMNYIR 184
Query: 257 YM-KSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPE 315
+ K + + +RHCLYGLDADLIMLGL HE F+LLRE++ + KG Q + P
Sbjct: 185 KIQKFNQNKSKTLRHCLYGLDADLIMLGLVAHENQFTLLREKLIW-----KGTQQNIKPI 239
Query: 316 ET----------KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIG 365
++ +F LL +SL+RD L LEF K KE F F+IE I+DD++ M LIG
Sbjct: 240 DSLKKKNQPAGDEFHLLEISLLRDMLYLEF-KPKES--WRFTFNIERIVDDFIFMCMLIG 296
Query: 366 NDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQ 425
NDF+P+LP L I +G L LL + Y+E+ GY+ + +++ R E FL K+++ + E+
Sbjct: 297 NDFLPSLPHLSIASGGLNLLVRSYKEIQKDSKGYLTKKYQMHMGRVELFLEKISN-EAEE 355
Query: 426 FREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYE 485
F F + K + + L +Y+
Sbjct: 356 F---------------------FFCQNEKNWGGNGSTL-------------------DYK 375
Query: 486 EYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAEC-YIRAIQWNLHYY 544
E YYS + LDY+ ++ ++ + YI+ + W L+YY
Sbjct: 376 ESYYSSK---------------------LNLDYSSGKDKKRLEKLKSDYIQGLNWCLYYY 414
Query: 545 YNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPY 604
+ GC SW+W+YP +YAP SD+KD + +K+ G PF P QLL+VLP S LP +
Sbjct: 415 HKGCPSWNWFYPEYYAPLTSDLKDLKKIKIKFTKGRPFEPLIQLLSVLPPKSSIFLPLTF 474
Query: 605 QNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMD--AVEHLLTDE 662
NLMT ++SPIL +YP F DLNGKK WE VVL+PFID+ KLI ++ + L E
Sbjct: 475 ANLMTDKDSPILNFYPNNFKLDLNGKKNLWEGVVLLPFIDQKKLIDTVNIYGRKESLCKE 534
Query: 663 ERSRNRHGPMLVY 675
E+ RN G +V+
Sbjct: 535 EKIRNCFGKDVVF 547
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 88/128 (68%), Gaps = 4/128 (3%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +++ R + EFD YLDMNGIIHNCS D TE+++
Sbjct: 1 MGVPKFFRWLSERYPLINQ--RLVENSEFDCFYLDMNGIIHNCSQKEQKDNI--QTEEEL 56
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FQ IF Y + LFR+++P+KL ++AIDGVAPRAKMNQQR RRFRS KE E ++ E +
Sbjct: 57 FQKIFSYTDHLFRIVRPRKLIYLAIDGVAPRAKMNQQRSRRFRSVKELEKIKTVVNETSK 116
Query: 121 RLPTEKRF 128
E F
Sbjct: 117 LSKNEISF 124
>gi|154285288|ref|XP_001543439.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407080|gb|EDN02621.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1327
Score = 335 bits (858), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 230/739 (31%), Positives = 371/739 (50%), Gaps = 35/739 (4%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K +YY K + +E +R E Y++ +QW L+YYY G SW W+Y +HY+P
Sbjct: 391 KFQEWKNNYYKSKFGWDMDNHEEMRQLTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPM 450
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+K ++ +++G+PF PF+QL+ VLP SK+++P + LMT SPI+++YP +
Sbjct: 451 ISDVKLGLEADMNFDLGQPFHPFEQLMGVLPDRSKQIVPSAFHELMTSPESPIIDFYPRD 510
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---N 679
F D+NGKK +WEAVV IPFIDE +L+ AM +HLLT EE +RN G L +TYS
Sbjct: 511 FELDMNGKKMEWEAVVKIPFIDEKRLLSAMATKKHLLTPEENARNEFGVTLKFTYSPDIE 570
Query: 680 VNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL-YVTHFPTLKH 738
++LA FP I + H +E D + + GL + V L + FP+LK
Sbjct: 571 YIYPSSLA-GVFPDIAKCHCIENVF--DLPTMEGLEPFVGLVEGVKLGHEALAGFPSLKT 627
Query: 739 VQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRV 798
+ ++ V VFQQ SRNES+++ + + S ++A Q LG+ + + YP L E +V
Sbjct: 628 LPHNGQLGFHGVSVFQQESRNESMVVTLSEPENRSSVELAKQKLGQRVHVGYPFLQEAKV 687
Query: 799 QAVATKD-SRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYG 857
V+ + + D V D ++ + Y +LG+ +G E +V+
Sbjct: 688 TRVSDELFDYMYVDGEQHIVSIPHTPSQTDQWRRKAHQVESYYSKRLGMVVGEIESMVHV 747
Query: 858 QPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESL---EYKTIDEIFYP 913
Q + + G ++ I T YA Q V + + E ++E F
Sbjct: 748 QML--KGLMKTAEGATVKEFADIPGIETDYALQLVVDRVMCEDDRFIEREALPVEEEFPE 805
Query: 914 GCQCFALSNPHYGSGGCVISTVKEENSFIKL-SFKVQQEPDLSDLVHLQDDTVYNYLPSY 972
G + F L +YG+ V T E L S +EP+ + + + Y PS+
Sbjct: 806 GTRAFFLGEYNYGA--PVHITGHEAGKLSGLVSVTKGREPEFGRDLTRAAEKLSPYSPSF 863
Query: 973 TVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKK 1032
+A L+++PL L++ T S ++ +R N+GLN+KF K +V+G++RR T
Sbjct: 864 AIARSLNLNPLALAKITSSFTVVLD----GQRINLGLNLKFEAKKLKVLGYSRRGPTG-- 917
Query: 1033 WFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQRVAQIVSWLKEQP 1091
W ++E+ + L++ YM +FPE ++ D + D +P + ++ +I +WLK
Sbjct: 918 WEFSEKAIDLLQQYMIKFPEFIAGIQRKPQGDGFQATDFYPAETAAAKIKEIQAWLKSIE 977
Query: 1092 HAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITL----FVKPNKLYIPKPTLDKLC 1147
+ P A +D+ +V IE A D + T V N L P +L
Sbjct: 978 AKNFDRVPLEAEQLDSNLVKSIEQAADELLRTRPAATAKKLKGVPRNALLKPADAEHRLG 1037
Query: 1148 PDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI-- 1205
+ F L DRVV ++ VP+ RGT++G+ + TS + D+VFD F G +
Sbjct: 1038 ---NQSFSLGDRVVYAQESGKVPIATRGTVVGLTR--TSRTLLLDIVFDVSFMSGTTLGD 1092
Query: 1206 RCSESRGYRMPAQAMINLS 1224
RCS RG +PA ++N++
Sbjct: 1093 RCSPFRGSTVPASCVLNVT 1111
Score = 277 bits (709), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 135/258 (52%), Positives = 185/258 (71%), Gaps = 12/258 (4%)
Query: 183 LPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHE 242
+P E+ FDSNCITPGT FM +L QQL+YF+ K++ D W+ V ++LSGHE
Sbjct: 1 MPKEEAFDSNCITPGTEFMAKLTQQLKYFINKKVSEDV---------EWQGVEIVLSGHE 51
Query: 243 TPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNT 302
PGEGEHKIM+YIR K++P Y P++RHCLYGLDADLIMLGL +H+P+F LLREEV F
Sbjct: 52 VPGEGEHKIMEYIRQSKAQPGYQPDIRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGR 111
Query: 303 KSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGF 362
+S K ++ E F+L+HL ++R+YLELEF +L+E L FPF +E +IDD++LM F
Sbjct: 112 QSQKKSKEL---EHQNFYLMHLCMVREYLELEFQELEEENALQFPFDLERVIDDFILMAF 168
Query: 363 LIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFD 422
+GNDF+PNLP+LHI GAL ++KVY++VLP L GYINE G +NL+R L L+ +
Sbjct: 169 FVGNDFLPNLPNLHINEGALAWMFKVYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVE 228
Query: 423 FEQFREKYADIQYLEGKM 440
F F +++D ++++ KM
Sbjct: 229 FRFFEAEFSDARWIKSKM 246
>gi|171694057|ref|XP_001911953.1| hypothetical protein [Podospora anserina S mat+]
gi|170946977|emb|CAP73781.1| unnamed protein product [Podospora anserina S mat+]
Length = 1419
Score = 334 bits (857), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 160/302 (52%), Positives = 209/302 (69%), Gaps = 11/302 (3%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK LFFMAIDGVAPRAKMNQQR RRFR+A +AE KA ++G+ LP E FDSNCITPG
Sbjct: 76 PKTLFFMAIDGVAPRAKMNQQRARRFRTALDAERARDKAIQEGKELPKEPPFDSNCITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
+ L+YF+ K++ DK W+ ++LSGHE PGEGEHKIM+YIR
Sbjct: 136 MLLPPDVWFSLKYFINKKVSEDKDWQGP---------EIVLSGHEVPGEGEHKIMEYIRN 186
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
+++PDYNPN+RHCLYGLDADLIMLGL +H+P+F LLREEV+F ++ ++ E
Sbjct: 187 ARAQPDYNPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVQFGRVKDQ--HKVKELEHQ 244
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F+L+HL ++R+YLELEF +LK PG + PF +E +IDD++LM F +GNDF+PNLP HI
Sbjct: 245 NFYLMHLCIVREYLELEFQELKVPGAIPMPFDMEKVIDDFILMAFFVGNDFLPNLPRFHI 304
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GAL ++K+Y+EVL DGYINE G +NLKR L +L ++ F + D +L
Sbjct: 305 NEGALATMFKIYKEVLRKCDGYINENGRVNLKRLAILLEELGREEYRFFEHENEDAGWLR 364
Query: 438 GK 439
GK
Sbjct: 365 GK 366
Score = 330 bits (847), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 244/766 (31%), Positives = 377/766 (49%), Gaps = 40/766 (5%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKL-DYAKVTNE-VLRDQAECYIRAIQWNLHYYYNG 547
+D + +F + K YY K ++A+ +E LR AE Y++ +QW L YYY G
Sbjct: 487 ADAQSAMEAKYKQKFQEWKDGYYKDKFPEWAEGKHEDELRKLAENYVQGLQWVLFYYYRG 546
Query: 548 CVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNL 607
SW W+Y +HY+P +SD+ +L + +G+PF P +QL+ VLP SK ++P Y L
Sbjct: 547 IASWPWFYRYHYSPLVSDVVKGLGADLNFTLGQPFRPNEQLMGVLPDRSKSIVPTVYWPL 606
Query: 608 MTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
MT ++SPI+++YP +F D+NGKK DWEAVV IPFIDE +L+ AM LL+DEE++RN
Sbjct: 607 MTDKDSPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRLLDAMAPKNDLLSDEEKARN 666
Query: 668 RHGPMLVYTYS---NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDV 724
G L +TYS + ++L D FP I H VE D V + R GL
Sbjct: 667 DFGVALKFTYSPDVDFEYASSLV-DVFPHIPHCHCVENIF--DLPPVEGLEYRAGLTDGA 723
Query: 725 NLKL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILG 783
L + FP+L + +T + V VF+Q SRNES+++ ++ + + A LG
Sbjct: 724 LLNAEALAGFPSLATLPYTASLGFHGVNVFKQDSRNESMVVNLIGTEMRTKVESAKVKLG 783
Query: 784 KTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTK 843
+ F+ YP L E ++ V+ + D N + F I + Y +
Sbjct: 784 QRCFVGYPFLQEAKIVGVSDELFDYVLDGNGQVATLHHGHREIEEFGKKANKIENFYSKR 843
Query: 844 LGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESL 902
+G+ IG E LV Q + + G ++ I T YA Q V + E
Sbjct: 844 MGILIGPVESLVRVQML--KGLIKTDEGATIKEYGDIPGMETDYASQIIVDEVANEDERF 901
Query: 903 EYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVH 959
K ++E F F L + +YG +S + L+ +EPD + +
Sbjct: 902 IEKAALPLEEEFPVKSIGFFLGDFNYGQ-PLEVSGYTNGKLQVWLATLESREPDFAKRII 960
Query: 960 LQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEE 1019
+ + +Y+PSY VA +L + PL LS+ T S F+ G R N+GLN+KF K ++
Sbjct: 961 YESERGNSYMPSYMVAKQLDLHPLALSKITSSYFV---KTVGDLRVNLGLNLKFEGKKQK 1017
Query: 1020 VVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVF--PHQGE 1077
V+G++R+ +T W ++ V LI YM FP+ F +K + S D++ P+
Sbjct: 1018 VLGYSRKSQTG--WEFSSAAVHLIVQYMTNFPDFFAGVKRNPSGAELKETDLWSDPNLAT 1075
Query: 1078 QRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKL- 1136
RV +I +WLK E P A +D++VV I D+ K + P K+
Sbjct: 1076 ARVKEIGAWLKTLKTNSMERVPLDAEQLDSEVVMRIAAEADSL----KLSAIPTVPKKMN 1131
Query: 1137 YIPKPTLDKLCPD------PDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAM 1190
+P+ L L PD + F L DRVV + VP+ +RGT++GI + T+ +
Sbjct: 1132 GVPRNAL--LRPDDAEHRLGNQHFALGDRVVYVARTGKVPIAFRGTVVGISRTPTA--KL 1187
Query: 1191 YDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSN 1234
DVVFD F G + RC RG +P+ ++NL+ + + G+ N
Sbjct: 1188 LDVVFDVTFMSGTTLGGRCPPFRGQTVPSTTLLNLTGRQVVAGSKN 1233
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/144 (59%), Positives = 107/144 (74%), Gaps = 3/144 (2%)
Query: 3 VPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDND-PHFRITEKQIF 61
VPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + +D RI+E+Q+F
Sbjct: 1 VPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDDVQQARISEEQMF 60
Query: 62 QDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGER 121
IF+YIE LF I+PK LFFMAIDGVAPRAKMNQQR RRFR+A +AE KA ++G+
Sbjct: 61 IAIFNYIEHLFGKIKPKTLFFMAIDGVAPRAKMNQQRARRFRTALDAERARDKAIQEGKE 120
Query: 122 LPTEKRFD--FITLKFCFPKKLFF 143
LP E FD IT P ++F
Sbjct: 121 LPKEPPFDSNCITPGMLLPPDVWF 144
>gi|154317860|ref|XP_001558249.1| hypothetical protein BC1G_02913 [Botryotinia fuckeliana B05.10]
Length = 945
Score = 333 bits (854), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 233/744 (31%), Positives = 366/744 (49%), Gaps = 32/744 (4%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F + K YY K ++ + L E Y++ +QW L+YYY G VSW WYY +HY+P
Sbjct: 58 KFQEWKDKYYEGKFEWDRKNEIELTKLCENYVQGLQWVLYYYYRGVVSWPWYYQYHYSPM 117
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+ ++ +++G+PF PF+QL+ VLP SK+++P Y +LMT SPI+++YP +
Sbjct: 118 ISDVIKGLKADVNFKLGQPFHPFEQLMGVLPDRSKKIVPTVYHDLMTNPASPIIDFYPRD 177
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NVN 681
F D+NGKK +WEAVV IPFIDE +L+ AM +LL+D E+ RN G L +TY +V+
Sbjct: 178 FELDMNGKKMEWEAVVKIPFIDEKRLLDAMATKNNLLSDAEKFRNEFGVSLKFTYDPDVD 237
Query: 682 -LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNL-KLYVTHFPTLKHV 739
+ + FP I H VE D + GL L + FP+L ++
Sbjct: 238 FIYPSSLTGIFPDIPHCHCVENIF--DLPTIEGLDFYHGLMDGAKLGSASLAGFPSLGYL 295
Query: 740 QFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQ 799
+ + V VFQ SRNES+++ + ++ + + A Q LGK +F+ YP L E +V
Sbjct: 296 PYNATLGFHGVNVFQSDSRNESMVVTIEDCEIRTNVKTAQQKLGKRVFVGYPFLQEGKVV 355
Query: 800 AVATK--DSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYG 857
V+ + D S D + P+ D F+ + I Y +LG+ IG E L +
Sbjct: 356 KVSDELFDYLPSEDASGQPITRPHGPREIDDFRKKAERIESTYSKRLGIIIGPVESLTHV 415
Query: 858 QPVESRKYFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESLEYKT---IDEIFYP 913
+ ++ K G ++ I T YA Q V + + K ++E F
Sbjct: 416 EMLKGLKKM--DDGATIKEYAVIPGQDTDYASQVVVDEVTSEDQRFLEKAALPVEEEFPV 473
Query: 914 GCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYT 973
+ F L + +YG G V + + + K ++ ++VH Y PS+
Sbjct: 474 DDRIFFLGDFNYGRPGLVEGHMDHKLQISLSTIKGKEVEFGRNIVH-DSKNATQYTPSFA 532
Query: 974 VASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKW 1033
VA L + PL+LS+ T S + + G R N+GLN+KF K +V+G++RR + W
Sbjct: 533 VAKMLGLHPLVLSKITSSFQV---SAVGQLRVNLGLNLKFEGKKLKVLGYSRRADN--GW 587
Query: 1034 FYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHA 1093
++ + + LI YM +FP F ++ + Y D FP + +IV+WLK
Sbjct: 588 EFSNKAIELISTYMTKFPHFFAGIQRKPQGNDYEESD-FPG---ASIKEIVAWLKTIESK 643
Query: 1094 KAEVRPCGAAVVDAKVVSLIEHAVDTC---EKVEKQITLFVKPNKLYIPKPTLDKLCPDP 1150
E P A +D+ V IE A ++ TL P + + C
Sbjct: 644 NFEKVPLDAEQLDSDTVMAIEQAAQHALVNGPQPQRTTLKAVPRGALLKPSDAEHRC--G 701
Query: 1151 DTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCS 1208
+ KF L DRVV + D VP+ RGT++GI + T + DV+FD F G + RCS
Sbjct: 702 NQKFALGDRVVYVADSGRVPIATRGTVVGISR--TPRTTLLDVLFDVTFMSGTTLGERCS 759
Query: 1209 ESRGYRMPAQAMINLSYGERLCGN 1232
RG +P +++NL+ + + G+
Sbjct: 760 PFRGSTVPIASVLNLTNKQLIAGS 783
>gi|190345127|gb|EDK36952.2| hypothetical protein PGUG_01050 [Meyerozyma guilliermondii ATCC
6260]
Length = 1378
Score = 332 bits (850), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/303 (51%), Positives = 211/303 (69%), Gaps = 14/303 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK +F+MAIDGVAPRAKMNQQR RRFR+A EAE +KA +G +P + FDSN ITPG
Sbjct: 41 PKGVFYMAIDGVAPRAKMNQQRARRFRTAYEAEENLKKAISQGLEIPKDDPFDSNAITPG 100
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L + L+YF+ KI+TD W +T+ +ILSGHE PGEGEHKIM+YIR
Sbjct: 101 TEFMAKLTENLKYFIHKKISTDSRWAETV---------IILSGHEVPGEGEHKIMNYIRT 151
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
MKS+P+YN N RHC+YGLDADLIMLGL +H+P+F LLREEV F +S + + +
Sbjct: 152 MKSQPNYNSNSRHCIYGLDADLIMLGLVSHDPHFCLLREEVTFGPRSGNKSNDL---HDQ 208
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
KFFLLH+SL+R+Y+ LEF + +SF F E ++DD +L+ ++IGNDF+P+LPDL+I
Sbjct: 209 KFFLLHISLLREYISLEFQDMDND--VSFEFDFERVLDDLILIMYVIGNDFLPSLPDLYI 266
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GA PLL + +++ L DGYINE G +NLKR +L L+ F+ E F + D+ +
Sbjct: 267 NKGAFPLLLETFKQALAESDGYINENGTINLKRLAIWLRHLSEFELENFEKSNVDVDWFN 326
Query: 438 GKM 440
++
Sbjct: 327 QRL 329
Score = 281 bits (720), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 228/801 (28%), Positives = 390/801 (48%), Gaps = 62/801 (7%)
Query: 467 TDDDYDDGTEE----VLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVT 522
TD++++D E V Y + + D +E R + ++F + K YY K ++
Sbjct: 434 TDEEHEDRINEIRKSVKKYQSANLFETEDLLKESRDIYDAKFMKWKDQYYQEKFKFSIHD 493
Query: 523 NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF------SHLNLKY 576
E + + E YI +QW L+YYY GC SWSWYY +HYAP ISDI ++ + +
Sbjct: 494 KEEMVNLTEHYIEGLQWVLYYYYQGCPSWSWYYRYHYAPRISDISIGLENMLENNKKITF 553
Query: 577 EMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEA 636
E+G PF PF+QL+AVLPA S++L+P Y+ LMT +SPI+++YP++ D+NGK WEA
Sbjct: 554 ELGTPFKPFEQLMAVLPARSRKLMPLEYRPLMTESHSPIIDFYPDKVDIDMNGKTASWEA 613
Query: 637 VVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NVN-LGTALAPDYFPAI 694
VVL+ F+DE +LI+ + +E LT EE RN G + + ++ +N + + P +F I
Sbjct: 614 VVLLSFVDEKRLIETLKPIEAKLTPEETKRNSFGTDIEFIHNPQINHVYPSPLPTFFSDI 673
Query: 695 NENHAVEKPLYRDDIYVHP--NKLRKGLCQDVNL-KLYVTHFPTLKHVQFTHKIENAKVK 751
+ EK ++V P K+ GL L K + FPTL V+F +++ A+V+
Sbjct: 674 EHDKCYEK------VFVLPEIQKVAIGLGDGALLGKNLLAGFPTLNTVKFNAELKLAEVR 727
Query: 752 VFQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISF 810
VFQ PSR+ S+I+ + ++ + + Q + + +G+ + +P L E RV +V D +
Sbjct: 728 VFQAPSRSVSMILSIPEQEEGLTTYQFSQKFVGRLAYSRWPFLRESRVVSVV--DEEFKY 785
Query: 811 DKNSGPVFERAAKDMQD-----AFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKY 865
+ ++ D F+ + +++ + Y +GV++G + +VY Q V
Sbjct: 786 ESVKISTSKKVVATPNDPEGVREFKTTSRNLYETYKRNMGVELGKIDAIVYVQAVSG--- 842
Query: 866 FFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKT-----IDEIFYPGCQCFAL 920
K +T+ + T Y Q V ++ E Y T IDE F + L
Sbjct: 843 -LIRNAKGAYVKTYSKHTEAYPLQLIVEDVVHRDE--RYATRPPLPIDEEFPLDSEVVFL 899
Query: 921 SNPHYGSGGCVISTVKEENSF-IKLS-FKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKL 978
YGS V + +K+S + EP++ ++ Y+PS+ VA +L
Sbjct: 900 GAFAYGSPATVAGFGDTNDKINVKVSKIQTAAEPNIGQRRAEIENREIRYMPSFEVAKRL 959
Query: 979 SISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQ 1038
++PL LS+ T + + ++G KR N+GL +KF + ++V+GFT++ + K W ++
Sbjct: 960 KLNPLFLSKLTSGLML----DDGGKRVNVGLELKFEARRQKVLGFTKK--SAKFWEFSPL 1013
Query: 1039 VVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVR 1098
V LI +Y FP+ F L + D+ +A + WLK+ V
Sbjct: 1014 AVKLIDDYRATFPKFFSKL---AQSDLKSMPKTSTITNPDELAAVRKWLKQVKSDLITVS 1070
Query: 1099 PCGAAVVD---AKVVSLIEHAVDTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFK 1155
++ A + +E+ V + K+ V ++ P + L +F
Sbjct: 1071 LESESLTKFSFAAIEDYMENYVSQDIPLTKKDIKGVPREAVFNPGQSYQVLSTQ---RFS 1127
Query: 1156 LFDRVVNIRDCYTVPLGYRGTI--IGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGY 1213
L DRVV ++D VP +GT+ I V + S ++D V K+R +RG
Sbjct: 1128 LGDRVVYVQDSGKVPYLSKGTVATITTVGPKVSLGVVFDEVLLSGNNMNGKLRT--NRGL 1185
Query: 1214 RMPAQAMINLSYGERLCGNSN 1234
+ + ++N++ ++L +SN
Sbjct: 1186 IVDSSLVLNIT-DKQLVYHSN 1205
Score = 110 bits (274), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MN I+H C+H ND D R+T+ Q++ IF YIE LF +I+PK +F+MAIDGVAPRAKMN
Sbjct: 1 MNSILHTCTHSND-DTLSRMTDDQMYAAIFSYIEHLFEIIKPKGVFYMAIDGVAPRAKMN 59
Query: 96 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
QQR RRFR+A EAE +KA +G +P + FD
Sbjct: 60 QQRARRFRTAYEAEENLKKAISQGLEIPKDDPFD 93
>gi|255715011|ref|XP_002553787.1| KLTH0E07062p [Lachancea thermotolerans]
gi|238935169|emb|CAR23350.1| KLTH0E07062p [Lachancea thermotolerans CBS 6340]
Length = 1496
Score = 331 bits (848), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 159/304 (52%), Positives = 212/304 (69%), Gaps = 18/304 (5%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK+ F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA GE +P + FDSN ITPG
Sbjct: 77 PKQTFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALEKAIRDGEEIPKGEPFDSNSITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L + L+YF+ KI+ D W T +ILSGHE PGEGEHKIM+YIR
Sbjct: 137 TEFMAKLTENLKYFIHDKISNDSAWSST---------SIILSGHEVPGEGEHKIMEYIRR 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
M+++PDYN N RHC+YGLDADLIMLGL TH+P+F+LLREEV F G Q P E
Sbjct: 188 MRAQPDYNANTRHCIYGLDADLIMLGLSTHDPHFALLREEVTF------GRRQKAAPLEY 241
Query: 318 K-FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
+ F+LLH+S++R+YLELEF ++ + L F + E I+DD++L+ F+IGNDF+PNLPDLH
Sbjct: 242 QNFYLLHISMLREYLELEFREIADD--LQFEYDFERILDDFILVMFVIGNDFLPNLPDLH 299
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL 436
+ GA P+L + ++E L DGYINE G +NL RF+ +L L+ F+ F + D+++
Sbjct: 300 LNKGAFPVLLQTFKEALKHTDGYINEQGTINLSRFQVWLQYLSEFEMMNFEREDIDVEWF 359
Query: 437 EGKM 440
++
Sbjct: 360 NKQL 363
Score = 301 bits (770), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 237/771 (30%), Positives = 371/771 (48%), Gaps = 71/771 (9%)
Query: 489 YSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGC 548
Y++ E+WR YY KL ++ + LR+ E Y+ +QW L YYY GC
Sbjct: 503 YNERFEKWRDQ-----------YYREKLGFSYYDEDKLRELTETYVEGLQWVLFYYYRGC 551
Query: 549 VSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLM 608
SWSWYY +HYAP ISD+ + ++K+ +G+PF PFQQL+AVLP SK L+P Y+ LM
Sbjct: 552 QSWSWYYKYHYAPRISDVYKGLNQSIKFNLGKPFRPFQQLMAVLPERSKNLIPTVYRPLM 611
Query: 609 TLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
SPI ++YP E D NGK DWEAVV + F+DE +LI+AM + LT EE+ RN
Sbjct: 612 YDPKSPIADFYPSEVELDKNGKTADWEAVVKLSFVDENRLIEAMAPYDEKLTPEEKRRNS 671
Query: 669 HGPMLVYTYSNVNLGTALAP--DYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNL 726
G L + ++ +P F I NH E+ D + GL L
Sbjct: 672 FGTDLAFVFNPQVDDVYKSPLSGIFSDIEHNHCTEREFVPDSM--EGLDFLFGLPTGAKL 729
Query: 727 KL-YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQD--KVQVPSLKQVADQIL 782
+ + FPTLK + F +K++ +FQQPSR +S+++ ++D K +L +VA L
Sbjct: 730 GVEALAGFPTLKTLAFDNKLDYNGCMIFQQPSRQQSMLLSIRDAYKAGNLTLDEVAKTHL 789
Query: 783 GKTIFINYPHLIEIRVQAVATKDSRISF------DKNSGPVFERAAKDMQDA----FQLS 832
GK I+ +P+L E ++ ++ D + +F D + + K ++A F
Sbjct: 790 GKVIYTRWPNLRESKLLSIT--DGKTTFEASEYTDARGIHHIKISQKQTEEAERKLFNSQ 847
Query: 833 KKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAV 892
K S+ Y GV + N +V PV G T +TF Y Q V
Sbjct: 848 KSSMMRTYSINRGVILDNIRAIVKVVPVNGLTRTI--EGAYT--KTFSPVEEYYPLQLVV 903
Query: 893 LNLQQARESLEYK---TIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQ 949
+++ E + IDE F G L + YG +T+ +S +L V+
Sbjct: 904 EDVENKDERFMERPPLPIDEEFPQGSDVIFLGDYAYGGK----ATIDGYSSPTRLKLTVE 959
Query: 950 Q-----EPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKR 1004
+ EP++ + D+ + Y PS+ VA KL I PL LSR T S F++ ++ K
Sbjct: 960 KSVTKSEPNVGKVRAKLDEKMIRYYPSFVVAKKLQIHPLFLSRIT-SKFLVSGLKD--KS 1016
Query: 1005 HNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDD 1064
+ GL IKF ++E+V+G+ RR+ + W Y++ V L+ Y + FP++F L D + D
Sbjct: 1017 VDFGLKIKFESRHEKVLGYARRN--VRGWEYSDMTVALLSEYKRNFPDLFSKLSD-AGRD 1073
Query: 1065 IYLRDDVFPHQGEQRVAQIV----SWLKEQPHAKAEVRPCGAAVVDAKVVSL---IEHAV 1117
+ ++P + +++ SWLK V ++ A ++++ IE V
Sbjct: 1074 VPSISKLYPGVDANDLRKLIDDVSSWLKNVRQNFVTVSLESDSLTKASMIAVEDAIEKYV 1133
Query: 1118 DTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTI 1177
V K+ V + PK + L KF L DRV+ I+D VPL +GT+
Sbjct: 1134 TNPVDVSKKQLAKVPREAVLDPKESFSLLRTQ---KFDLGDRVIYIQDSGKVPLFSKGTV 1190
Query: 1178 IG--IVQGETSYDAMYD--VVFDKPFPHGVKIRCSESRGYRMPAQAMINLS 1224
+G + + S ++D +V F G ++R RG + + ++NLS
Sbjct: 1191 VGYTTIGPKLSIQVLFDHEIVAGNNF--GGRLRT--KRGLGLDSSFLLNLS 1237
Score = 171 bits (434), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 99/129 (76%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P +S+++ QIPEFDNLYLDMN I+H C+H ND+D R++E+++
Sbjct: 1 MGIPKFFRYISERWPMISQLIDGTQIPEFDNLYLDMNSILHTCTHANDDDVKKRMSEEEV 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF YI+ LF I PK+ F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA GE
Sbjct: 61 FSKIFAYIDHLFHTIGPKQTFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALEKAIRDGE 120
Query: 121 RLPTEKRFD 129
+P + FD
Sbjct: 121 EIPKGEPFD 129
>gi|15238990|ref|NP_199069.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|75262831|sp|Q9FQ02.1|XRN2_ARATH RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein
EXORIBONUCLEASE 2
gi|11875630|gb|AAG40733.1|AF286720_1 XRN2 [Arabidopsis thaliana]
gi|51970342|dbj|BAD43863.1| unnamed protein product [Arabidopsis thaliana]
gi|62319144|dbj|BAD94308.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|332007441|gb|AED94824.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1012
Score = 330 bits (847), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 217/648 (33%), Positives = 332/648 (51%), Gaps = 115/648 (17%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK------ 179
FD+I F P+KL FMAIDGVAPRAKMNQQR RRFR+AK+A + ++
Sbjct: 84 FDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARRFRAAKDAAEAAAEEEQLREEFER 143
Query: 180 -GERLPTE---KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
G++LP + + FDSN ITPGT FM L LRY++ +++ +D WK++
Sbjct: 144 EGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYIHVRLNSDP---------GWKNIK 194
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR K+ P YNPN HCLYGLDADLIML L THE +FS+LR
Sbjct: 195 VILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIMLSLATHEIHFSILR 254
Query: 296 EEVKFNTKSNK---------------GGSQIVTPE-----------ETKFFLLHLSLMRD 329
E V F + K G + T E + + +++ ++R+
Sbjct: 255 EVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVVKKPYEFVNIWILRE 314
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YLE + ++ PG +++ +IDD++ + F +GNDF+P++P L I GA+ LL VY
Sbjct: 315 YLEHD---MQIPGAKK---NLDRLIDDFIFICFFVGNDFLPHMPTLEIREGAIELLMSVY 368
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFH 449
+ + Y+ + LNL+ E+F+ + ++ + F +K A +Q ++ S+ F
Sbjct: 369 KNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIF-QKRAQVQ-------QRQSERFR 420
Query: 450 KEKSKEMDPDLAA---------LIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNF 500
++K+++ D A K D D + L+ + +Y D+
Sbjct: 421 RDKARDKARDNARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGVAN 480
Query: 501 FSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECY-----------IRAIQWNLHYY----- 544
K + + D ++LRD+ + + + + W YY
Sbjct: 481 VETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGNGEQDKVKLNKVGWRERYYEEKFA 540
Query: 545 -----------------YNGCVSW------------SWYYPHHYAPYISDIKDFSHLNLK 575
Y + W +W+YP+HYAP+ SD+K L++K
Sbjct: 541 AKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIK 600
Query: 576 YEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWE 635
+E+G PF PF QLLAVLP+AS LPE Y++LMT +SPI ++YP +F D+NGK+ W+
Sbjct: 601 FELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRYSWQ 660
Query: 636 AVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLG 683
+ +PF++E +L++A VE LT+EE RN +++ ++ LG
Sbjct: 661 GISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLFVVASHPLG 708
Score = 121 bits (303), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 78/124 (62%), Gaps = 23/124 (18%)
Query: 1 MGVPKFFRYISERYPC-LSEVVRE---------YQIP-----------EFDNLYLDMNGI 39
MGVP F+R++ +RYP + EV+ E IP E+DNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 40 IHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
IH C HP D TE +FQ +F YI+ LF M++P+KL FMAIDGVAPRAKMNQQR
Sbjct: 61 IHPCFHPEDKPSPTTFTE--VFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRA 118
Query: 100 RRFR 103
RRFR
Sbjct: 119 RRFR 122
>gi|367003924|ref|XP_003686695.1| hypothetical protein TPHA_0H00510 [Tetrapisispora phaffii CBS 4417]
gi|357524997|emb|CCE64261.1| hypothetical protein TPHA_0H00510 [Tetrapisispora phaffii CBS 4417]
Length = 1492
Score = 330 bits (847), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/303 (51%), Positives = 212/303 (69%), Gaps = 13/303 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA G+ LP + FDSN ITPG
Sbjct: 78 PKKVFYMAIDGVAPRAKMNQQRSRRFRTAMDAETALKKAIANGDELPKGEPFDSNSITPG 137
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L + L+YF+ KI+ D W+++ V+ SGHE PGEGEHKIMD+IR
Sbjct: 138 TEFMAKLTRNLKYFIHDKISND---------LNWQNIEVVFSGHEVPGEGEHKIMDFIRN 188
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
++S+ DY N RHC+YGLDADLIMLGL TH+P+FSLLREEVKF + N GS + E+
Sbjct: 189 LRSQKDYEQNTRHCIYGLDADLIMLGLSTHDPHFSLLREEVKFGGRRNNSGS--LPLEKQ 246
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F+LLHLSL+R+Y+ LEF ++ L F + + I+DD++L+ F+IGNDF+PNLPDLH+
Sbjct: 247 NFYLLHLSLLREYMNLEFIEISTN--LQFKYEFDRILDDFILIMFVIGNDFLPNLPDLHL 304
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GA P++ + ++E L LDGYINE G +NLKR +L L+ F+ F + D+ +
Sbjct: 305 NKGAFPVILQTFKEALLHLDGYINENGKINLKRLGVWLNYLSQFELMNFEKDDIDVDWFN 364
Query: 438 GKM 440
++
Sbjct: 365 KQL 367
Score = 286 bits (733), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 212/726 (29%), Positives = 349/726 (48%), Gaps = 42/726 (5%)
Query: 522 TNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEP 581
+ E + + A Y+ +QW L+YYY GC SWSWYY HYAP ISD+ +E P
Sbjct: 565 SEEDVAEIARNYVEGLQWVLYYYYRGCPSWSWYYKGHYAPRISDLAKGLDQTFVFEKRHP 624
Query: 582 FLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIP 641
F PFQQL+AVLP SK L+P + LM E SPIL++YP E D NGK DWEAVVL+
Sbjct: 625 FTPFQQLMAVLPERSKNLIPAVLRPLMFDEKSPILDFYPNEVQLDKNGKSADWEAVVLLS 684
Query: 642 FIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAP--DYFPAINENHA 699
F+DE +L+ AM LT EE+ RN G L + ++ +P F I NH
Sbjct: 685 FVDEDRLVTAMQPYLEKLTPEEKERNSFGIDLTFRFNPQVDEVYKSPLNGVFSDIKHNHC 744
Query: 700 VEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVT-HFPTLKHVQFTHKIENAKVKVFQQPSR 758
+E + + +H ++R GL + Y++ FP+ + F K+E + VFQQPS+
Sbjct: 745 MEIKFEMEKLDLH--EIRYGLLPEAKDGKYLSAGFPSFDTIPFDAKLEYNETAVFQQPSK 802
Query: 759 NESIIIVQDKV---QVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSG 815
+S++I + V ++ +++++ + ++ +P+L E ++ V+ I D+ +G
Sbjct: 803 QQSMVIYINNVYEGDDVTIDEISNRFMKSIVYTKWPYLRESKLIGVSNGIETIGADEMTG 862
Query: 816 PVFERAAKDMQDA-FQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVT 874
+ +R D++ + K S+ Y + V IG+ + ++ PV
Sbjct: 863 KITKRNLSDLEKKEYNNLKNSMYRNYGKQQAVKIGDIKSIIKVVPVTG----LARDSTGA 918
Query: 875 QQRTFIRSTVTYAYQ---SAVLNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCV 931
+TF Y Q +++N+ + + ID+ F G + L + Y GG
Sbjct: 919 YVKTFGSQIEYYPVQLMVDSIINVDKRFVEKPPQPIDQEFPEGSKVVFLGD--YAYGGTA 976
Query: 932 ISTVKEENSFIKLSFK---VQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRF 988
S +KLS + ++ EP + + H D + Y PSY V+ L PL LS+
Sbjct: 977 TIDGYSSGSRLKLSVEKRSIRSEPTIGKIRHDIDKKLIKYQPSYIVSKTLKFHPLFLSKI 1036
Query: 989 TGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMK 1048
T S +++ + +R ++G+ IKF + ++V+G+ RR + K W Y+ + L+ +Y K
Sbjct: 1037 T-SKYLVAGID--GRRVDVGIPIKFEGRRQKVLGYARR--SVKGWEYSNLTIDLLNHYKK 1091
Query: 1049 QFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIV----SWLKEQPHAKAEVRPCGAAV 1104
FPE L ++DI +++P + A+++ +WLK V ++
Sbjct: 1092 TFPEFIDKLARLKTNDIPNIGELYPELTNVKAAELLDRVKTWLKNATENFVTVSLESDSL 1151
Query: 1105 VDAKVVSLIEHAV----DTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRV 1160
A ++ IE A+ E+ E + V + PK +L KL +F L DRV
Sbjct: 1152 SKAS-INAIEEAIIPYSTFAEQSEIKQLAKVPREAILDPKESLTKLR---SQRFDLGDRV 1207
Query: 1161 VNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQ 1218
+ I+ VPL +GT++G S V+FD G + R +RG + A
Sbjct: 1208 IYIQSSGKVPLFSKGTVVGYTTLPHSISVQ--VLFDNEIVAGNRFGGRLRTNRGLGLDAS 1265
Query: 1219 AMINLS 1224
++N+S
Sbjct: 1266 YLLNIS 1271
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 99/130 (76%), Gaps = 1/130 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDND-PHFRITEKQ 59
MG+PKFFRYISER+P + +++ QIPEFDNLYLDMN I+HNC+H ND D R++E++
Sbjct: 1 MGIPKFFRYISERWPLILQLIENDQIPEFDNLYLDMNSILHNCTHGNDMDNTRQRLSEEE 60
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
++ IF YI+ L I+PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA G
Sbjct: 61 VYAKIFAYIDHLLNTIKPKKVFYMAIDGVAPRAKMNQQRSRRFRTAMDAETALKKAIANG 120
Query: 120 ERLPTEKRFD 129
+ LP + FD
Sbjct: 121 DELPKGEPFD 130
>gi|413924952|gb|AFW64884.1| hypothetical protein ZEAMMB73_783884 [Zea mays]
Length = 893
Score = 329 bits (844), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 235/761 (30%), Positives = 348/761 (45%), Gaps = 181/761 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE---------------YQIPE------FDNLYLDMNGI 39
MGVP FF+++ +YP + +E + P + NLYLDMN I
Sbjct: 1 MGVPSFFKWLVGKYPNIVVPAKEDDGGAGAGASSPSSPWDEPAAGPNGVYHNLYLDMNAI 60
Query: 40 IHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
IH C HP D + F ++F A M +
Sbjct: 61 IHPCFHPEDE-----VCPPTTFDEVF--------------------------AAMFEYID 89
Query: 100 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQR 159
R FR + P KL ++A+DGVAPRAKMNQQR
Sbjct: 90 RLFRIVR-------------------------------PTKLLYLAVDGVAPRAKMNQQR 118
Query: 160 GRRFRSAKEAEVLEQKAKEKGERLPTEKR------------FDSNCITPGTPFMCRLHQQ 207
RRF++AKEA+ E + K E+ E R D N ITPGT FM +L +
Sbjct: 119 SRRFKAAKEAKDAELEEKLLREKFRAEGREVRARPRETHEVSDPNIITPGTEFMEKLSKA 178
Query: 208 LRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPN 267
L Y+V+ ++ +D WK + VILS PGEGEHK+M +IR +S Y+PN
Sbjct: 179 LEYYVRSRLNSDP---------GWKGIKVILSDSNVPGEGEHKVMSFIRGQRSLASYDPN 229
Query: 268 MRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGS------------------ 309
HCLYGLDADLIML L +HE +FS+LRE+ ++ K S
Sbjct: 230 TMHCLYGLDADLIMLALASHELHFSILREDGSRQSQPEKCISLSNEMLKTEDSSRKCRGW 289
Query: 310 --QIV-TPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGN 366
Q++ T + + +++ ++R+YLEL+ K+ P V + IE +IDD++ + FL GN
Sbjct: 290 FPQVIETTPKKPYQFVNIWVLREYLELDL-KIPNPVVKT---DIERLIDDFIFICFLTGN 345
Query: 367 DFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYI--------NEGGYLNLKRFEKFLTKL 418
DFIP +P + I GA+ LL + Y++ + GYI YL + R EKF +L
Sbjct: 346 DFIPRIPSVEIHEGAIDLLLEAYKQTFNKMGGYIVSTEKLKDKHAAYLKVSRLEKFFHEL 405
Query: 419 ASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDG---T 475
+ + + F ++Y + L+ K ++ + E+ KE + D T ++ DG T
Sbjct: 406 SLCEEKIFLKRYDLRESLQRKFLRQAA-----EECKETNYD-------TMEENTDGLNLT 453
Query: 476 EEVLNYANYEEYYYSDEDE------EWRTNFFSE---------------------FGQHK 508
+ + Y DE + E R N K
Sbjct: 454 AKSFSTNCSISTYSQDESDVKANTLELRRNLKDALRNKQDLIKSGSCKHDMIRLGLAGWK 513
Query: 509 TDYYHYKLDYAKVT--NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI 566
+ YY K K++ ++ D + Y+ + W L YY+ SWSWYYP+++AP+ SD
Sbjct: 514 SRYYREKFGVEKLSEVGKLKNDMVQRYMEGLCWVLQYYFTDVPSWSWYYPYYHAPFASDF 573
Query: 567 KDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
K S + + +P PF QL+AVLP S LP+ Y+ LM E S + ++YP + D
Sbjct: 574 KGLSQFKICFTTDKPLKPFDQLMAVLPKESSCALPKCYRELMENEESLVQKFYPSDLQID 633
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
+GK+ W+ + ++PFIDE L+ A VE L E +RN
Sbjct: 634 THGKRFLWQGIAMLPFIDEKLLVSATKTVEGKLAVHEINRN 674
>gi|146423491|ref|XP_001487673.1| hypothetical protein PGUG_01050 [Meyerozyma guilliermondii ATCC
6260]
Length = 1378
Score = 329 bits (844), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 157/303 (51%), Positives = 211/303 (69%), Gaps = 14/303 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK +F+MAIDGVAPRAKMNQQR RRFR+A EAE +KA +G +P + FDSN ITPG
Sbjct: 41 PKGVFYMAIDGVAPRAKMNQQRARRFRTAYEAEENLKKAILQGLEIPKDDPFDSNAITPG 100
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L + L+YF+ KI+TD W +T+ +ILSGHE PGEGEHKIM+YIR
Sbjct: 101 TEFMAKLTENLKYFIHKKISTDSRWAETV---------IILSGHEVPGEGEHKIMNYIRT 151
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
MKS+P+YN N RHC+YGLDADLIMLGL +H+P+F LLREEV F +S + + +
Sbjct: 152 MKSQPNYNSNSRHCIYGLDADLIMLGLVSHDPHFCLLREEVTFGPRSGNKSNDL---HDQ 208
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
KFFLLH+SL+R+Y+ LEF + +SF F E ++DD +L+ ++IGNDF+P+LPDL+I
Sbjct: 209 KFFLLHISLLREYISLEFQDMDND--VSFEFDFERVLDDLILIMYVIGNDFLPSLPDLYI 266
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
GA PLL + +++ L DGYINE G +NLKR +L L+ F+ E F + D+ +
Sbjct: 267 NKGAFPLLLETFKQALAESDGYINENGTINLKRLAIWLRHLSEFELENFEKLNVDVDWFN 326
Query: 438 GKM 440
++
Sbjct: 327 QRL 329
Score = 280 bits (716), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 228/801 (28%), Positives = 390/801 (48%), Gaps = 62/801 (7%)
Query: 467 TDDDYDDGTEE----VLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVT 522
TD++++D E V Y + + D +E R + ++F + K YY K ++
Sbjct: 434 TDEEHEDRINEIRKSVKKYQSANLFETEDLLKESRDIYDAKFMKWKDQYYQEKFKFSIHD 493
Query: 523 NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF------SHLNLKY 576
E + + E YI +QW L+YYY GC SWSWYY +HYAP ISDI ++ + +
Sbjct: 494 KEEMVNLTEHYIEGLQWVLYYYYQGCPSWSWYYRYHYAPRISDISIGLENMLENNKKITF 553
Query: 577 EMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEA 636
E+G PF PF+QL+AVLPA S++L+P Y+ LMT +SPI+++YP++ D+NGK WEA
Sbjct: 554 ELGTPFKPFEQLMAVLPARSRKLMPLEYRPLMTESHSPIIDFYPDKVDIDMNGKTASWEA 613
Query: 637 VVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NVN-LGTALAPDYFPAI 694
VVL+ F+DE +LI+ + +E LT EE RN G + + ++ +N + + P +F I
Sbjct: 614 VVLLSFVDEKRLIETLKPIEAKLTPEETKRNSFGTDIEFIHNPQINHVYPSPLPTFFSDI 673
Query: 695 NENHAVEKPLYRDDIYVHP--NKLRKGLCQDVNL-KLYVTHFPTLKHVQFTHKIENAKVK 751
+ EK ++V P K+ GL L K + FPTL V+F +++ A+V+
Sbjct: 674 EHDKCYEK------VFVLPEIQKVAIGLGDGALLGKNLLAGFPTLNTVKFNAELKLAEVR 727
Query: 752 VFQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISF 810
VFQ PSR+ S+I+ + ++ + + Q + + +G+ + +P L E RV +V D +
Sbjct: 728 VFQAPSRSVSMILSIPEQEEGLTTYQFSQKFVGRLAYSRWPFLRESRVVSVV--DEEFKY 785
Query: 811 DKNSGPVFERAAKDMQD-----AFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKY 865
+ ++ D F+ + +++ + Y +GV++G + +VY Q V
Sbjct: 786 ESVKILTSKKVVATPNDPEGVREFKTTSRNLYETYKRNMGVELGKIDAIVYVQAVSG--- 842
Query: 866 FFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKT-----IDEIFYPGCQCFAL 920
K +T+ + T Y Q V ++ E Y T IDE F + L
Sbjct: 843 -LIRNAKGAYVKTYSKHTEAYPLQLIVEDVVHRDE--RYATRPPLPIDEEFPLDSEVVFL 899
Query: 921 SNPHYGSGGCVISTVKEENSF-IKLS-FKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKL 978
YGS V + +K+S + EP++ ++ Y+PS+ VA +L
Sbjct: 900 GAFAYGSPATVAGFGDTNDKINVKVSKIQTAAEPNIGQRRAEIENREIRYMPSFEVAKRL 959
Query: 979 SISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQ 1038
++PL LS+ T + + ++G KR N+GL +KF + ++V+GFT++ + K W ++
Sbjct: 960 KLNPLFLSKLTSGLML----DDGGKRVNVGLELKFEARRQKVLGFTKK--SAKFWEFSPL 1013
Query: 1039 VVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVR 1098
V LI +Y FP+ F L + D+ +A + WLK+ V
Sbjct: 1014 AVKLIDDYRATFPKFFSKL---AQSDLKSMPKTLTITNPDELAAVRKWLKQVKLDLITVS 1070
Query: 1099 PCGAAVVD---AKVVSLIEHAVDTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFK 1155
++ A + +E+ V + K+ V ++ P + L +F
Sbjct: 1071 LESESLTKFSFAAIEDYMENYVSQDIPLTKKDIKGVPREAVFNPGQSYQVLSTQ---RFL 1127
Query: 1156 LFDRVVNIRDCYTVPLGYRGTI--IGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGY 1213
L DRVV ++D VP +GT+ I V + S ++D V K+R +RG
Sbjct: 1128 LGDRVVYVQDSGKVPYLSKGTVATITTVGPKVSLGVVFDEVLLSGNNMNGKLRT--NRGL 1185
Query: 1214 RMPAQAMINLSYGERLCGNSN 1234
+ + ++N++ ++L +SN
Sbjct: 1186 IVDSSLVLNIT-DKQLVYHSN 1205
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MN I+H C+H ND D R+T+ Q++ IF YIE LF +I+PK +F+MAIDGVAPRAKMN
Sbjct: 1 MNSILHTCTHSND-DTLSRMTDDQMYAAIFSYIEHLFEIIKPKGVFYMAIDGVAPRAKMN 59
Query: 96 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
QQR RRFR+A EAE +KA +G +P + FD
Sbjct: 60 QQRARRFRTAYEAEENLKKAILQGLEIPKDDPFD 93
>gi|448526146|ref|XP_003869280.1| Kem1 5'-->3' exoribonuclease [Candida orthopsilosis Co 90-125]
gi|380353633|emb|CCG23144.1| Kem1 5'-->3' exoribonuclease [Candida orthopsilosis]
Length = 1465
Score = 329 bits (844), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/341 (48%), Positives = 228/341 (66%), Gaps = 25/341 (7%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT 185
F++I F PKK F+MAIDGVAPRAKMNQQR RRFR+A EAE+ +KA E G+ LP
Sbjct: 64 FNYIDHLFSIIKPKKTFYMAIDGVAPRAKMNQQRARRFRTAYEAEINLKKAIENGDELPK 123
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPG 245
E FDSN ITPGT FM +L + L+YFV KIT D W + + ++LSGHE PG
Sbjct: 124 EDPFDSNSITPGTEFMAKLTENLKYFVHKKITEDSRWAN---------IEIVLSGHEVPG 174
Query: 246 EGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN 305
EGEHKI ++IR ++S+ Y+PN+RHC+YGLDADLIMLGL +H+P+F+LLREEV F + +
Sbjct: 175 EGEHKIQEFIRAVRSQDGYDPNLRHCIYGLDADLIMLGLVSHDPHFALLREEVTFGNRKS 234
Query: 306 KGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIG 365
G + VT + KFFLLHLSL+R+YLELEF +++E +SF + E ++DD++L+ ++IG
Sbjct: 235 SSGPKDVT--DQKFFLLHLSLVREYLELEFKEVEEQ--ISFEYDFEKVLDDFILIMYVIG 290
Query: 366 NDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS----- 420
NDF+P+LPDLH+ GA PLL +++ L DGYINE G +NL+R ++ L+
Sbjct: 291 NDFLPHLPDLHLNKGAFPLLISTFKQSLLQSDGYINEDGKINLRRLNIWVHHLSDFEFEN 350
Query: 421 -----FDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEM 456
D E F +K D+ K KK + ++ K++
Sbjct: 351 FEEREVDVEWFNKKLDDVSISGEKKRKKIGKLLILKEQKKL 391
Score = 281 bits (718), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 228/797 (28%), Positives = 378/797 (47%), Gaps = 72/797 (9%)
Query: 467 TDDDYDDGTEE----VLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVT 522
+++DYD+ E V +Y D E + + +F K +YY KL+++
Sbjct: 470 SEEDYDERISELRKAVKSYQTANLVESQDVLGETKGVYEEKFKSWKNNYYEEKLNFSIDN 529
Query: 523 NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF------SHLNLKY 576
E L + E YI +QW L+YYY GC SW++YY +HYAP ISDI +++ +
Sbjct: 530 KEKLTEMTEHYIEGLQWVLYYYYRGCPSWNFYYRYHYAPRISDISVGLEELIKKGVDITF 589
Query: 577 EMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEA 636
E +PF PF+QL+AVLPA SK+L+P Y+ LMT E SPI+ +YP E D+NGK WEA
Sbjct: 590 EKSKPFKPFEQLMAVLPARSKKLMPAVYRPLMTDEKSPIIGFYPHEVDIDMNGKTASWEA 649
Query: 637 VVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTAL---APDYFPA 693
VVL+ F+DE KL+ A+ +E LT EE RN +G + + +N + P +F
Sbjct: 650 VVLLDFVDEKKLLDALKPIESKLTPEETKRNSYGNNIKFI-NNPQIDKVYPSPLPGFF-- 706
Query: 694 INENHAVEKPLYRDDIYVHPNKL--RKGLCQDVNLKLYVT-HFPTLKHVQFTHKIENAKV 750
H +E + ++V P + + G ++ ++ FPTL+ + FT ++ +V
Sbjct: 707 ----HDIEHDKCYETVFVLPEVVEPKIGKLEEARTGTDLSAGFPTLQSIPFTFELALNEV 762
Query: 751 KVFQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRIS 809
KVF S++ES+++ V++ + Q A G+ I+ N+P L E +V V ++
Sbjct: 763 KVFNFSSKSESMVLNVENVWSDMTSHQFAQSFAGRLIYGNWPFLRECKVVRVEDGENSYE 822
Query: 810 FDKNSGPVFERAAKDMQDAFQLSKKSITDG---YYTKL-GVDIGNTEVLVYGQPVESRKY 865
+N +M + +S + ++ K GV +G EVLV+ + V
Sbjct: 823 SVRNIKGFKHVVTTEMNPEEKRIYRSTCNNLNYFWDKTKGVKLGQIEVLVHVKAVNG--- 879
Query: 866 FFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYK---TIDEIFYPGCQCFALSN 922
K +T+ + + Q V ++ + + ++E F Q L +
Sbjct: 880 -LIRNSKGAYVKTYSKDVEIFPLQLIVKDVTHKDQRFATRPPLPVEEEFPLRSQVIFLGD 938
Query: 923 PHYGSGGCVISTVKEENSFIKLSFKVQQ-----EPDLSDLVHLQDDTVYNYLPSYTVASK 977
YG+ V+ + KLS KV + EP++ + +Y+PS+ V K
Sbjct: 939 LGYGAPAQVVGYSGD-----KLSIKVSKISSVAEPNIGKRRQSIEAKQISYVPSFDVGKK 993
Query: 978 LSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTE 1037
L I+PLLLS+ T I D G K+ NIGL +KF K ++V+G+TR+ K W ++
Sbjct: 994 LGINPLLLSKITSQYMIQD----GNKKINIGLELKFQSKRQKVLGYTRQSANGKFWEFSP 1049
Query: 1038 QVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEV 1097
+ LI+ Y ++FP++F L DI DV + ++ WLKE KA++
Sbjct: 1050 LAINLIQTYKQKFPKLFAKLSQLKGSDIPNLKDV---SDADEIQEVKKWLKE---VKADL 1103
Query: 1098 RPCGAAVVDAKVVSLIEHAVDTCEKVEKQITL----FVKPNKLYIPKPTLDKLCPD---- 1149
P V + S + + + E+ + L + + +P+ +
Sbjct: 1104 IP-----VSLESQSFTKFSFASIEQYMENYVLSQVPMINKDIRGVPRNAILNASESYQLL 1158
Query: 1150 PDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RC 1207
D KF L DRV ++D VP+ +GT++ I+ V+FD P G + +
Sbjct: 1159 SDQKFDLGDRVEYVQDFGKVPIMSKGTVVSIIT--VGSKTSLGVIFDVPQLSGNNMNGKL 1216
Query: 1208 SESRGYRMPAQAMINLS 1224
+RG + + ++NLS
Sbjct: 1217 QTNRGLSLDSSLVLNLS 1233
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFR+ISER+P +S+++ E QIPEFDNLYLDMN I+H C+H ND RI++ Q+
Sbjct: 1 MGIPKFFRFISERWPLISQLIDEKQIPEFDNLYLDMNSILHTCTHSNDGSIT-RISDDQM 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ IF+YI+ LF +I+PKK F+MAIDGVAPRAKMNQQR RRFR+A EAE+ +KA E G+
Sbjct: 60 YAAIFNYIDHLFSIIKPKKTFYMAIDGVAPRAKMNQQRARRFRTAYEAEINLKKAIENGD 119
Query: 121 RLPTEKRFD 129
LP E FD
Sbjct: 120 ELPKEDPFD 128
>gi|334188143|ref|NP_001190450.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|332007442|gb|AED94825.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1023
Score = 327 bits (838), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 218/651 (33%), Positives = 333/651 (51%), Gaps = 115/651 (17%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK------ 179
FD+I F P+KL FMAIDGVAPRAKMNQQR RRFR+AK+A + ++
Sbjct: 84 FDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARRFRAAKDAAEAAAEEEQLREEFER 143
Query: 180 -GERLPTE---KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
G++LP + + FDSN ITPGT FM L LRY++ +++ +D WK++
Sbjct: 144 EGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYIHVRLNSDP---------GWKNIK 194
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR K+ P YNPN HCLYGLDADLIML L THE +FS+LR
Sbjct: 195 VILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIMLSLATHEIHFSILR 254
Query: 296 EEVKFNTKSNK---------------GGSQIVTPE-----------ETKFFLLHLSLMRD 329
E V F + K G + T E + + +++ ++R+
Sbjct: 255 EVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVVKKPYEFVNIWILRE 314
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YLE + ++ PG +++ +IDD++ + F +GNDF+P++P L I GA+ LL VY
Sbjct: 315 YLEHD---MQIPGAKK---NLDRLIDDFIFICFFVGNDFLPHMPTLEIREGAIELLMSVY 368
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFH 449
+ + Y+ + LNL+ E+F+ + ++ + F +K A +Q ++ S+ F
Sbjct: 369 KNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIF-QKRAQVQ-------QRQSERFR 420
Query: 450 KEKSKEMDPDLAA---------LIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNF 500
++K+++ D A K D D + L+ + +Y D+
Sbjct: 421 RDKARDKARDNARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGVAN 480
Query: 501 FSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECY-----------IRAIQWNLHYY----- 544
K + + D ++LRD+ + + + + W YY
Sbjct: 481 VETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGNGEQDKVKLNKVGWRERYYEEKFA 540
Query: 545 -----------------YNGCVSW----------SW--YYPHHYAPYISDIKDFSHLNLK 575
Y + W SW +YP+HYAP+ SD+K L++K
Sbjct: 541 AKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIK 600
Query: 576 YEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWE 635
+E+G PF PF QLLAVLP+AS LPE Y++LMT +SPI ++YP +F D+NGK+ W+
Sbjct: 601 FELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRYSWQ 660
Query: 636 AVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTAL 686
+ +PF++E +L++A VE LT+EE RN +++ ++ LG +
Sbjct: 661 GISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLFVVASHPLGELI 711
Score = 121 bits (303), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 78/124 (62%), Gaps = 23/124 (18%)
Query: 1 MGVPKFFRYISERYPC-LSEVVRE---------YQIP-----------EFDNLYLDMNGI 39
MGVP F+R++ +RYP + EV+ E IP E+DNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 40 IHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
IH C HP D TE +FQ +F YI+ LF M++P+KL FMAIDGVAPRAKMNQQR
Sbjct: 61 IHPCFHPEDKPSPTTFTE--VFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRA 118
Query: 100 RRFR 103
RRFR
Sbjct: 119 RRFR 122
>gi|349578059|dbj|GAA23225.1| K7_Kem1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1528
Score = 327 bits (838), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/311 (50%), Positives = 219/311 (70%), Gaps = 18/311 (5%)
Query: 130 FITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRF 189
F T+K PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA E G+ +P + F
Sbjct: 72 FQTIK---PKKIFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALKKAIENGDEIPKGEPF 128
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSN ITPGT FM +L + L+YF+ KI+ D W++V +I SGHE PGEGEH
Sbjct: 129 DSNSITPGTEFMAKLTKNLQYFIHDKISNDS---------KWREVQIIFSGHEVPGEGEH 179
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGS 309
KIM++IR++KS+ D+N N RHC+YGLDADLIMLGL TH P+F+LLREEV F ++++ S
Sbjct: 180 KIMNFIRHLKSQKDFNQNTRHCIYGLDADLIMLGLSTHGPHFALLREEVTFGRRNSEKKS 239
Query: 310 QIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFI 369
E F+LLHLSL+R+Y+ELEF ++ + + F ++ E I+DD++L+ F+IGNDF+
Sbjct: 240 L----EHQNFYLLHLSLLREYMELEFKEIADE--MQFEYNFERILDDFILVMFVIGNDFL 293
Query: 370 PNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
PNLPDLH+ GA P+L + ++E L DGYINE G +NLKR +L L+ F+ F +
Sbjct: 294 PNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKD 353
Query: 430 YADIQYLEGKM 440
D+++ ++
Sbjct: 354 DIDVEWFNKQL 364
Score = 308 bits (788), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 239/804 (29%), Positives = 383/804 (47%), Gaps = 58/804 (7%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
+E E +T + F + K +YYH KL + + E +RD A+ Y+ +QW L+YYY GC S
Sbjct: 495 EELETEKTIYNERFERWKHEYYHDKLKFTTDSEEKVRDLAKDYVEGLQWVLYYYYRGCPS 554
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
WSWYYPHHYAP ISD+ ++++++ +PF PFQQL+AVLP SK L+P ++ LM
Sbjct: 555 WSWYYPHHYAPRISDLAKGLDQDIEFDLSKPFTPFQQLMAVLPERSKNLIPPAFRPLMYD 614
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
E SPI ++YP E D NGK DWEAVVLI F+DE +LI+AM L+ EE++RN+ G
Sbjct: 615 EQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVDEKRLIEAMQPYLCKLSPEEKTRNQFG 674
Query: 671 PMLVYTYSNV--NLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL 728
L+Y+++ N+ + F I NH VEK I + +++R GL + L
Sbjct: 675 KDLIYSFNPQVDNIYKSPLGGIFSDIEHNHCVEKEYIT--IPLDSSEIRYGLLPNAKLGA 732
Query: 729 -YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQD--KVQVPSLKQVADQILGK 784
+ FPTL + FT +E + VFQQPS+ +S+++ + D K +L+ + + L K
Sbjct: 733 EMLAGFPTLLSLPFTSSLEYNETMVFQQPSKQQSMVLQITDIYKTNNVTLEDFSKRHLNK 792
Query: 785 TIFINYPHLIEIRVQAVATKDSRISF---DKNSGPVFERAAK--DMQDA--FQLSKKSIT 837
I+ +P+L E ++ V+ D + + + N F K + QD F K S+
Sbjct: 793 VIYTRWPYLRESKL--VSLTDGKTIYEYQESNDKKKFRFITKPAETQDKKLFNSLKNSML 850
Query: 838 DGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQ-----RTFIRSTVTYAYQSAV 892
Y + V IG PVE+ F G V +TF + Y Q V
Sbjct: 851 RMYAKQKAVKIG---------PVEAIATVFPVTGLVRDSDGGYIKTFSPTPDYYPLQLVV 901
Query: 893 LNLQQARESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFK-V 948
++ E + + I+E F + L + YG + + I + K +
Sbjct: 902 ESVVNEDERYKERGPIPIEEEFPLNSKVIFLGDYAYGGETTIDGYSSDRRLKITVEKKFL 961
Query: 949 QQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIG 1008
EP + D Y PSY V+ + + PL LS+ T I D+T K N+G
Sbjct: 962 DSEPTIGKERLQMDHQAVKYYPSYIVSKNMHLHPLFLSKITSKFMITDAT---GKHINVG 1018
Query: 1009 LNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLR 1068
+ +KF ++++V+G+ RR+ + W Y+ + L+K Y + FP+ F F +DI +
Sbjct: 1019 IPVKFEARHQKVLGYARRN--PRGWEYSNLTLNLLKEYRQTFPDFF-FRLSKVGNDIPVL 1075
Query: 1069 DDVFPHQGEQRVAQIVS----WLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE 1124
+D+FP + ++ WLK V ++ + ++ +H + +E
Sbjct: 1076 EDLFPDTSTKDAMNLLDGIKQWLKYVSSKFIAVSLESDSLTKTSIAAVEDHIMKYAANIE 1135
Query: 1125 ----KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI 1180
KQ+ V + P+ + L KF L DRVV I+D VP+ +GT++G
Sbjct: 1136 GHERKQLAK-VPREAVLNPRSSFALLR---SQKFDLGDRVVYIQDSGKVPIFSKGTVVGY 1191
Query: 1181 VQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPHVK 1238
+S V+FD G R +RG + A ++N++ + +S K
Sbjct: 1192 TTLSSSLSIQ--VLFDHEIVAGNNFGGRLRTNRGLGLDASFLLNIT-NRQFIYHSKASKK 1248
Query: 1239 NINVMQSRGERNTNYAQVTRQPQR 1262
+ + RN N + P +
Sbjct: 1249 ALEKKKQSNNRNNNTKTAHKTPSK 1272
Score = 173 bits (439), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 102/129 (79%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P + +++ QIPEFDNLYLDMN I+HNC+H ND+D R+TE+++
Sbjct: 1 MGIPKFFRYISERWPMILQLIEGTQIPEFDNLYLDMNSILHNCTHGNDDDVTKRLTEEEV 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F I YI+ LF+ I+PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA E G+
Sbjct: 61 FAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALKKAIENGD 120
Query: 121 RLPTEKRFD 129
+P + FD
Sbjct: 121 EIPKGEPFD 129
>gi|365765775|gb|EHN07281.1| Kem1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1528
Score = 327 bits (837), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 158/311 (50%), Positives = 219/311 (70%), Gaps = 18/311 (5%)
Query: 130 FITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRF 189
F T+K PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA E G+ +P + F
Sbjct: 72 FQTIK---PKKIFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALKKAIENGDEIPKGEPF 128
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSN ITPGT FM +L + L+YF+ KI+ D W++V +I SGHE PGEGEH
Sbjct: 129 DSNSITPGTEFMAKLTKNLQYFIHDKISNDS---------KWREVQIIFSGHEVPGEGEH 179
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGS 309
KIM++IR++KS+ D+N N RHC+YGLDADLIMLGL TH P+F+LLREEV F ++++ S
Sbjct: 180 KIMNFIRHLKSQKDFNQNTRHCIYGLDADLIMLGLSTHGPHFALLREEVTFGRRNSEKKS 239
Query: 310 QIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFI 369
E F+LLHLSL+R+Y+ELEF ++ + + F ++ E I+DD++L+ F+IGNDF+
Sbjct: 240 L----EHQNFYLLHLSLLREYMELEFKEIADE--MQFEYNFERILDDFILVMFVIGNDFL 293
Query: 370 PNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
PNLPDLH+ GA P+L + ++E L DGYINE G +NLKR +L L+ F+ F +
Sbjct: 294 PNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKD 353
Query: 430 YADIQYLEGKM 440
D+++ ++
Sbjct: 354 DIDVEWFNKQL 364
Score = 309 bits (791), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 240/804 (29%), Positives = 384/804 (47%), Gaps = 58/804 (7%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
+E E +T + F + K +YYH KL + + E +RD A+ Y+ +QW L+YYY GC S
Sbjct: 495 EELETEKTIYNERFERWKHEYYHDKLKFTTDSEEKVRDLAKDYVEGLQWVLYYYYRGCPS 554
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
WSWYYPHHYAP ISD+ ++++++ +PF PFQQL+AVLP SK L+P ++ LM
Sbjct: 555 WSWYYPHHYAPRISDLVKGLDQDIEFDLSKPFTPFQQLMAVLPERSKNLIPPAFRPLMYD 614
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
E SPI ++YP E D NGK DWEAVVLI F+DE +LI+AM L+ EE++RN+ G
Sbjct: 615 EQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVDEKRLIEAMQPYLCKLSPEEKTRNQFG 674
Query: 671 PMLVYTYSNV--NLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL 728
L+Y+++ N+ + F I NH VEK I + +++R GL + L
Sbjct: 675 KDLIYSFNPQVDNIYKSPLGGIFSDIEHNHCVEKEYIT--IPLDSSEIRYGLLPNAKLGA 732
Query: 729 -YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQD--KVQVPSLKQVADQILGK 784
+ FPTL + FT +E + VFQQPS+ +S+++ + D K +L+ + + L K
Sbjct: 733 EMLAGFPTLLSLPFTSSLEYNETMVFQQPSKQQSMVLQITDIYKTNNVTLEDFSKRHLNK 792
Query: 785 TIFINYPHLIEIRVQAVATKDSRISF---DKNSGPVFERAAK--DMQDA--FQLSKKSIT 837
I+ +P+L E ++ V+ D + + + N F K + QD F K S+
Sbjct: 793 VIYTRWPYLRESKL--VSLTDGKTIYEYQESNDKKKFRFITKPAETQDKKLFNSLKNSML 850
Query: 838 DGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQ-----RTFIRSTVTYAYQSAV 892
Y + V IG PVE+ F G V +TF + Y Q V
Sbjct: 851 RMYAKQKAVKIG---------PVEAIATVFPVTGLVRDSDGGYIKTFSPTPDYYPLQLVV 901
Query: 893 LNLQQARESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFK-V 948
++ E + + I+E F + L + YG + + I + K +
Sbjct: 902 ESVVNEDERYKERGPIPIEEEFPLNSKVIFLGDYAYGGETTIDGYSSDRRLKITVEKKFL 961
Query: 949 QQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIG 1008
EP + D Y PSYTV+ + + PL LS+ T I D+T K N+G
Sbjct: 962 DSEPTIGKERLQMDHQAVKYYPSYTVSKNMHLHPLFLSKITSKFMITDAT---GKHINVG 1018
Query: 1009 LNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLR 1068
+ +KF ++++V+G+ RR+ + W Y+ + L+K Y + FP+ F F +DI +
Sbjct: 1019 IPVKFEARHQKVLGYARRN--PRGWEYSNLTLNLLKEYRQTFPDFF-FRLSKVGNDIPVL 1075
Query: 1069 DDVFPHQGEQRVAQIVS----WLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE 1124
+D+FP + ++ WLK V ++ + ++ +H + +E
Sbjct: 1076 EDLFPDTSTKDAMNLLDGIKQWLKYVSSKFIAVSLESDSLTKTSIAAVEDHIMKYAANIE 1135
Query: 1125 ----KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI 1180
KQ+ V + P+ + L KF L DRVV I+D VP+ +GT++G
Sbjct: 1136 GHERKQLAK-VPREAVLNPRSSFALLR---SQKFDLGDRVVYIQDSGKVPIFSKGTVVGY 1191
Query: 1181 VQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPHVK 1238
+S V+FD G R +RG + A ++N++ + +S K
Sbjct: 1192 TTLSSSLSIQ--VLFDHEIVAGNNFGGRLRTNRGLGLDASFLLNIT-NRQFIYHSKASKK 1248
Query: 1239 NINVMQSRGERNTNYAQVTRQPQR 1262
+ + RN N + P +
Sbjct: 1249 ALEKKKQSNNRNNNTKTAHKTPSK 1272
Score = 173 bits (439), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 102/129 (79%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P + +++ QIPEFDNLYLDMN I+HNC+H ND+D R+TE+++
Sbjct: 1 MGIPKFFRYISERWPMILQLIEGTQIPEFDNLYLDMNSILHNCTHGNDDDVTKRLTEEEV 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F I YI+ LF+ I+PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA E G+
Sbjct: 61 FAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALKKAIENGD 120
Query: 121 RLPTEKRFD 129
+P + FD
Sbjct: 121 EIPKGEPFD 129
>gi|151943641|gb|EDN61951.1| 5'-3'-exonuclease [Saccharomyces cerevisiae YJM789]
Length = 1528
Score = 327 bits (837), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 158/311 (50%), Positives = 219/311 (70%), Gaps = 18/311 (5%)
Query: 130 FITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRF 189
F T+K PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA E G+ +P + F
Sbjct: 72 FQTIK---PKKIFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALKKAIENGDEIPKGEPF 128
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSN ITPGT FM +L + L+YF+ KI+ D W++V +I SGHE PGEGEH
Sbjct: 129 DSNSITPGTEFMAKLTKNLQYFIHDKISNDS---------KWREVQIIFSGHEVPGEGEH 179
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGS 309
KIM++IR++KS+ D+N N RHC+YGLDADLIMLGL TH P+F+LLREEV F ++++ S
Sbjct: 180 KIMNFIRHLKSQKDFNQNTRHCIYGLDADLIMLGLSTHGPHFALLREEVTFGRRNSEKKS 239
Query: 310 QIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFI 369
E F+LLHLSL+R+Y+ELEF ++ + + F ++ E I+DD++L+ F+IGNDF+
Sbjct: 240 L----EHQNFYLLHLSLLREYMELEFKEIADE--MQFEYNFERILDDFILVMFVIGNDFL 293
Query: 370 PNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
PNLPDLH+ GA P+L + ++E L DGYINE G +NLKR +L L+ F+ F +
Sbjct: 294 PNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKD 353
Query: 430 YADIQYLEGKM 440
D+++ ++
Sbjct: 354 DIDVEWFNKQL 364
Score = 307 bits (787), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 240/804 (29%), Positives = 383/804 (47%), Gaps = 58/804 (7%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
+E E +T + F + K +YYH KL + + E +RD A+ Y+ +QW L+YYY GC S
Sbjct: 495 EELETEKTIYNERFERWKHEYYHDKLKFTTDSEEKVRDLAKDYVEGLQWVLYYYYRGCPS 554
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
WSWYYPHHYAP ISD+ ++++++ +PF PFQQL+AVLP SK L+P ++ LM
Sbjct: 555 WSWYYPHHYAPRISDLVKGLDQDIEFDLSKPFTPFQQLMAVLPERSKNLIPPTFRPLMYD 614
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
E SPI ++YP E D NGK DWEAVVLI F+DE +LI+AM L+ EE++RN+ G
Sbjct: 615 EQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVDEKRLIEAMQPYLCKLSPEEKTRNQFG 674
Query: 671 PMLVYTYSNV--NLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL 728
L+Y+++ N+ + F I NH VEK I + +++R GL + L
Sbjct: 675 KDLIYSFNPQVDNIYKSPLGGIFSDIEHNHCVEKEYIT--IPLDSSEIRYGLLPNAKLGA 732
Query: 729 -YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQD--KVQVPSLKQVADQILGK 784
+ FPTL + FT +E + VFQQPS+ +S+++ + D K +L+ + + L K
Sbjct: 733 EMLAGFPTLLSLPFTSSLEYNETMVFQQPSKQQSMVLQITDIYKTNNVTLEDFSKRHLNK 792
Query: 785 TIFINYPHLIEIRVQAVATKDSRISF---DKNSGPVFERAAK--DMQDA--FQLSKKSIT 837
I+ +P+L E ++ V+ D + + + N F K + QD F K S+
Sbjct: 793 VIYTRWPYLRESKL--VSLTDGKTIYEYQESNDKKKFRFITKPAETQDKKLFNSLKNSML 850
Query: 838 DGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQ-----RTFIRSTVTYAYQSAV 892
Y + V IG PVE+ F G V +TF + Y Q V
Sbjct: 851 RMYAKQKAVKIG---------PVEAIATVFPVTGLVRDSDGGYIKTFSPTPDYYPLQLVV 901
Query: 893 LNLQQARESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFK-V 948
++ E + + I+E F + L + YG + + I + K +
Sbjct: 902 ESVVNEDERYKERGPIPIEEEFPLNSKVIFLGDYAYGGETTIDGYSSDRRLKITVEKKFL 961
Query: 949 QQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIG 1008
EP + D Y PSY VA + + PL LS+ T I D+T K N+G
Sbjct: 962 DSEPTIGKERLQMDHQAVKYYPSYIVAKNMHLHPLFLSKITSKFMITDAT---GKHINVG 1018
Query: 1009 LNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLR 1068
+ +KF ++++V+G+ RR+ + W Y+ + L+K Y + FP+ F F +DI +
Sbjct: 1019 IPVKFEARHQKVLGYARRN--PRGWEYSNLTLNLLKEYRQTFPDFF-FRLSKVGNDIPVL 1075
Query: 1069 DDVFPHQGEQRVAQIVS----WLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE 1124
+D+FP + ++ WLK V ++ + ++ +H + +E
Sbjct: 1076 EDLFPDTSTKDAMNLLDGIKQWLKYVSSKFIAVSLESDSLTKTSIAAVEDHIMKYAANIE 1135
Query: 1125 ----KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI 1180
KQ+ V + P+ + L KF L DRVV I+D VP+ +GT++G
Sbjct: 1136 GHERKQLAK-VPREAVLNPRSSFALLR---SQKFDLGDRVVYIQDSGKVPIFSKGTVVGY 1191
Query: 1181 VQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPHVK 1238
+S V+FD G R +RG + A ++N++ + +S K
Sbjct: 1192 TTLSSSLSIQ--VLFDHEIVAGNNFGGRLRTNRGLGLDASFLLNIT-NRQFIYHSKASKK 1248
Query: 1239 NINVMQSRGERNTNYAQVTRQPQR 1262
+ + RN N + P +
Sbjct: 1249 ALEKKKQSNNRNNNTKTAHKTPSK 1272
Score = 173 bits (439), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 102/129 (79%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P + +++ QIPEFDNLYLDMN I+HNC+H ND+D R+TE+++
Sbjct: 1 MGIPKFFRYISERWPMILQLIEGTQIPEFDNLYLDMNSILHNCTHGNDDDVTKRLTEEEV 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F I YI+ LF+ I+PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA E G+
Sbjct: 61 FAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALKKAIENGD 120
Query: 121 RLPTEKRFD 129
+P + FD
Sbjct: 121 EIPKGEPFD 129
>gi|190407116|gb|EDV10383.1| 5'-3' exonuclease [Saccharomyces cerevisiae RM11-1a]
gi|259146337|emb|CAY79594.1| Kem1p [Saccharomyces cerevisiae EC1118]
Length = 1528
Score = 327 bits (837), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 158/311 (50%), Positives = 219/311 (70%), Gaps = 18/311 (5%)
Query: 130 FITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRF 189
F T+K PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA E G+ +P + F
Sbjct: 72 FQTIK---PKKIFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALKKAIENGDEIPKGEPF 128
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSN ITPGT FM +L + L+YF+ KI+ D W++V +I SGHE PGEGEH
Sbjct: 129 DSNSITPGTEFMAKLTKNLQYFIHDKISNDS---------KWREVQIIFSGHEVPGEGEH 179
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGS 309
KIM++IR++KS+ D+N N RHC+YGLDADLIMLGL TH P+F+LLREEV F ++++ S
Sbjct: 180 KIMNFIRHLKSQKDFNQNTRHCIYGLDADLIMLGLSTHGPHFALLREEVTFGRRNSEKKS 239
Query: 310 QIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFI 369
E F+LLHLSL+R+Y+ELEF ++ + + F ++ E I+DD++L+ F+IGNDF+
Sbjct: 240 L----EHQNFYLLHLSLLREYMELEFKEIADE--MQFEYNFERILDDFILVMFVIGNDFL 293
Query: 370 PNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
PNLPDLH+ GA P+L + ++E L DGYINE G +NLKR +L L+ F+ F +
Sbjct: 294 PNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKD 353
Query: 430 YADIQYLEGKM 440
D+++ ++
Sbjct: 354 DIDVEWFNKQL 364
Score = 308 bits (788), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 240/804 (29%), Positives = 383/804 (47%), Gaps = 58/804 (7%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
+E E +T + F + K +YYH KL + + E +RD A+ Y+ +QW L+YYY GC S
Sbjct: 495 EELETEKTIYNERFERWKHEYYHDKLKFTTDSEEKVRDLAKDYVEGLQWVLYYYYRGCPS 554
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
WSWYYPHHYAP ISD+ ++++++ +PF PFQQL+AVLP SK L+P ++ LM
Sbjct: 555 WSWYYPHHYAPRISDLVKGLDQDIEFDLSKPFTPFQQLMAVLPERSKNLIPPAFRPLMYD 614
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
E SPI ++YP E D NGK DWEAVVLI F+DE +LI+AM L+ EE++RN+ G
Sbjct: 615 EQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVDEKRLIEAMQPYLCKLSPEEKTRNQFG 674
Query: 671 PMLVYTYSNV--NLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL 728
L+Y+++ N+ + F I NH VEK I + +++R GL + L
Sbjct: 675 KDLIYSFNPQVDNIYKSPLGGIFSDIEHNHCVEKEYIT--IPLDSSEIRYGLLPNAKLGA 732
Query: 729 -YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQD--KVQVPSLKQVADQILGK 784
+ FPTL + FT +E + VFQQPS+ +S+++ + D K +L+ + + L K
Sbjct: 733 EMLAGFPTLLSLPFTSSLEYNETMVFQQPSKQQSMVLQITDIYKTNNVTLEDFSKRHLNK 792
Query: 785 TIFINYPHLIEIRVQAVATKDSRISF---DKNSGPVFERAAK--DMQDA--FQLSKKSIT 837
I+ +P+L E ++ V+ D + + + N F K + QD F K S+
Sbjct: 793 VIYTRWPYLRESKL--VSLTDGKTIYEYQESNDKKKFRFITKPAETQDKKLFNSLKNSML 850
Query: 838 DGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQ-----RTFIRSTVTYAYQSAV 892
Y + V IG PVE+ F G V +TF + Y Q V
Sbjct: 851 RMYAKQKAVKIG---------PVEAIATVFPVTGLVRDSDGGYIKTFSPTPDYYPLQLVV 901
Query: 893 LNLQQARESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFK-V 948
++ E + + I+E F + L + YG + + I + K +
Sbjct: 902 ESVVNEDERYKERGPIPIEEEFPLNSKVIFLGDYAYGGETTIDGYSSDRRLKITVEKKFL 961
Query: 949 QQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIG 1008
EP + D Y PSY VA + + PL LS+ T I D+T K N+G
Sbjct: 962 DSEPTIGKERLQMDHQAVKYYPSYIVAKNMHLHPLFLSKITSKFMITDAT---GKHINVG 1018
Query: 1009 LNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLR 1068
+ +KF ++++V+G+ RR+ + W Y+ + L+K Y + FP+ F F +DI +
Sbjct: 1019 IPVKFEARHQKVLGYARRN--PRGWEYSNLTLNLLKEYRQTFPDFF-FRLSKVGNDIPVL 1075
Query: 1069 DDVFPHQGEQRVAQIVS----WLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE 1124
+D+FP + ++ WLK V ++ + ++ +H + +E
Sbjct: 1076 EDLFPDTSTKDAMNLLDGIKQWLKYVSSKFIAVSLESDSLTKTSIAAVEDHIMKYAANIE 1135
Query: 1125 ----KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI 1180
KQ+ V + P+ + L KF L DRVV I+D VP+ +GT++G
Sbjct: 1136 GHERKQLAK-VPREAVLNPRSSFALLR---SQKFDLGDRVVYIQDSGKVPIFSKGTVVGY 1191
Query: 1181 VQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPHVK 1238
+S V+FD G R +RG + A ++N++ + +S K
Sbjct: 1192 TTLSSSLSIQ--VLFDHEIVAGNNFGGRLRTNRGLGLDASFLLNIT-NRQFIYHSKASKK 1248
Query: 1239 NINVMQSRGERNTNYAQVTRQPQR 1262
+ + RN N + P +
Sbjct: 1249 ALEKKKQSNNRNNNTKTAHKTPSK 1272
Score = 173 bits (439), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 102/129 (79%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P + +++ QIPEFDNLYLDMN I+HNC+H ND+D R+TE+++
Sbjct: 1 MGIPKFFRYISERWPMILQLIEGTQIPEFDNLYLDMNSILHNCTHGNDDDVTKRLTEEEV 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F I YI+ LF+ I+PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA E G+
Sbjct: 61 FAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALKKAIENGD 120
Query: 121 RLPTEKRFD 129
+P + FD
Sbjct: 121 EIPKGEPFD 129
>gi|6321265|ref|NP_011342.1| Xrn1p [Saccharomyces cerevisiae S288c]
gi|125342|sp|P22147.1|XRN1_YEAST RecName: Full=5'-3' exoribonuclease 1; AltName: Full=DNA strand
transfer protein beta; Short=STP-beta; AltName:
Full=KAR(-)-enhancing mutation protein; AltName:
Full=Strand exchange protein 1; AltName: Full=p175
gi|3847|emb|CAA38520.1| KEM1 protein [Saccharomyces cerevisiae]
gi|4413|emb|CAA43487.1| RAR5 [Saccharomyces cerevisiae]
gi|172580|gb|AAA35036.1| strand exchange protein 1 [Saccharomyces cerevisiae]
gi|172775|gb|AAA35125.1| DNA strand transferase beta [Saccharomyces cerevisiae]
gi|173192|gb|AAA35219.1| 5'-3' exoribonuclease [Saccharomyces cerevisiae]
gi|695728|emb|CAA59180.1| DNA strand transferase, exoribonuclease [Saccharomyces cerevisiae]
gi|1322778|emb|CAA96885.1| KEM1 [Saccharomyces cerevisiae]
gi|285812040|tpg|DAA07940.1| TPA: Xrn1p [Saccharomyces cerevisiae S288c]
gi|392299577|gb|EIW10671.1| Kem1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1528
Score = 326 bits (836), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 158/311 (50%), Positives = 219/311 (70%), Gaps = 18/311 (5%)
Query: 130 FITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRF 189
F T+K PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA E G+ +P + F
Sbjct: 72 FQTIK---PKKIFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALKKAIENGDEIPKGEPF 128
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSN ITPGT FM +L + L+YF+ KI+ D W++V +I SGHE PGEGEH
Sbjct: 129 DSNSITPGTEFMAKLTKNLQYFIHDKISNDS---------KWREVQIIFSGHEVPGEGEH 179
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGS 309
KIM++IR++KS+ D+N N RHC+YGLDADLIMLGL TH P+F+LLREEV F ++++ S
Sbjct: 180 KIMNFIRHLKSQKDFNQNTRHCIYGLDADLIMLGLSTHGPHFALLREEVTFGRRNSEKKS 239
Query: 310 QIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFI 369
E F+LLHLSL+R+Y+ELEF ++ + + F ++ E I+DD++L+ F+IGNDF+
Sbjct: 240 L----EHQNFYLLHLSLLREYMELEFKEIADE--MQFEYNFERILDDFILVMFVIGNDFL 293
Query: 370 PNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
PNLPDLH+ GA P+L + ++E L DGYINE G +NLKR +L L+ F+ F +
Sbjct: 294 PNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKD 353
Query: 430 YADIQYLEGKM 440
D+++ ++
Sbjct: 354 DIDVEWFNKQL 364
Score = 310 bits (793), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 237/804 (29%), Positives = 383/804 (47%), Gaps = 58/804 (7%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
+E E +T + F + K +YYH KL + + E +RD A+ Y+ +QW L+YYY GC S
Sbjct: 495 EELETEKTIYNERFERWKHEYYHDKLKFTTDSEEKVRDLAKDYVEGLQWVLYYYYRGCPS 554
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
WSWYYPHHYAP ISD+ ++++++ +PF PFQQL+AVLP SK L+P ++ LM
Sbjct: 555 WSWYYPHHYAPRISDLAKGLDQDIEFDLSKPFTPFQQLMAVLPERSKNLIPPAFRPLMYD 614
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
E SPI ++YP E D NGK DWEAVVLI F+DE +LI+AM L+ EE++RN+ G
Sbjct: 615 EQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVDEKRLIEAMQPYLRKLSPEEKTRNQFG 674
Query: 671 PMLVYTYSNV--NLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL 728
L+Y+++ NL + F I NH VEK I + +++R GL + L
Sbjct: 675 KDLIYSFNPQVDNLYKSPLGGIFSDIEHNHCVEKEYIT--IPLDSSEIRYGLLPNAKLGA 732
Query: 729 -YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQD--KVQVPSLKQVADQILGK 784
+ FPTL + FT +E + VFQQPS+ +S+++ + D K +L+ + + L K
Sbjct: 733 EMLAGFPTLLSLPFTSSLEYNETMVFQQPSKQQSMVLQITDIYKTNNVTLEDFSKRHLNK 792
Query: 785 TIFINYPHLIEIRVQAVATKDSRISFD-------KNSGPVFERAAKDMQDAFQLSKKSIT 837
I+ +P+L E ++ V+ D + ++ K G + + A + F K S+
Sbjct: 793 VIYTRWPYLRESKL--VSLTDGKTIYEYQESNDKKKFGFITKPAETQDKKLFNSLKNSML 850
Query: 838 DGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQ-----RTFIRSTVTYAYQSAV 892
Y + V IG P+E+ F G V +TF + Y Q V
Sbjct: 851 RMYAKQKAVKIG---------PMEAIATVFPVTGLVRDSDGGYIKTFSPTPDYYPLQLVV 901
Query: 893 LNLQQARESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFK-V 948
++ E + + I+E F + L + YG + + I + K +
Sbjct: 902 ESVVNEDERYKERGPIPIEEEFPLNSKVIFLGDYAYGGETTIDGYSSDRRLKITVEKKFL 961
Query: 949 QQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIG 1008
EP + D Y PSY V+ + + PL LS+ T I D+T K N+G
Sbjct: 962 DSEPTIGKERLQMDHQAVKYYPSYIVSKNMHLHPLFLSKITSKFMITDAT---GKHINVG 1018
Query: 1009 LNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLR 1068
+ +KF ++++V+G+ RR+ + W Y+ + L+K Y + FP+ F F +DI +
Sbjct: 1019 IPVKFEARHQKVLGYARRN--PRGWEYSNLTLNLLKEYRQTFPDFF-FRLSKVGNDIPVL 1075
Query: 1069 DDVFPHQGEQRVAQIVS----WLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE 1124
+D+FP + ++ WLK V ++ + ++ +H + +E
Sbjct: 1076 EDLFPDTSTKDAMNLLDGIKQWLKYVSSKFIAVSLESDSLTKTSIAAVEDHIMKYAANIE 1135
Query: 1125 ----KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI 1180
KQ+ V + P+ + L KF L DRVV I+D VP+ +GT++G
Sbjct: 1136 GHERKQLAK-VPREAVLNPRSSFALLR---SQKFDLGDRVVYIQDSGKVPIFSKGTVVGY 1191
Query: 1181 VQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPHVK 1238
+S V+FD G R +RG + A ++N++ + +S K
Sbjct: 1192 TTLSSSLSIQ--VLFDHEIVAGNNFGGRLRTNRGLGLDASFLLNIT-NRQFIYHSKASKK 1248
Query: 1239 NINVMQSRGERNTNYAQVTRQPQR 1262
+ + RN N + P +
Sbjct: 1249 ALEKKKQSNNRNNNTKTAHKTPSK 1272
Score = 173 bits (439), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 102/129 (79%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P + +++ QIPEFDNLYLDMN I+HNC+H ND+D R+TE+++
Sbjct: 1 MGIPKFFRYISERWPMILQLIEGTQIPEFDNLYLDMNSILHNCTHGNDDDVTKRLTEEEV 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F I YI+ LF+ I+PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA E G+
Sbjct: 61 FAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALKKAIENGD 120
Query: 121 RLPTEKRFD 129
+P + FD
Sbjct: 121 EIPKGEPFD 129
>gi|256272237|gb|EEU07228.1| Kem1p [Saccharomyces cerevisiae JAY291]
Length = 1528
Score = 326 bits (836), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 158/311 (50%), Positives = 219/311 (70%), Gaps = 18/311 (5%)
Query: 130 FITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRF 189
F T+K PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA E G+ +P + F
Sbjct: 72 FQTIK---PKKIFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALKKAIENGDEIPKGEPF 128
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSN ITPGT FM +L + L+YF+ KI+ D W++V +I SGHE PGEGEH
Sbjct: 129 DSNSITPGTEFMAKLTKNLQYFIHDKISNDS---------KWREVQIIFSGHEVPGEGEH 179
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGS 309
KIM++IR++KS+ D+N N RHC+YGLDADLIMLGL TH P+F+LLREEV F ++++ S
Sbjct: 180 KIMNFIRHLKSQKDFNQNTRHCIYGLDADLIMLGLSTHGPHFALLREEVTFGRRNSEKKS 239
Query: 310 QIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFI 369
E F+LLHLSL+R+Y+ELEF ++ + + F ++ E I+DD++L+ F+IGNDF+
Sbjct: 240 L----EHQNFYLLHLSLLREYMELEFKEIADE--MQFEYNFERILDDFILVMFVIGNDFL 293
Query: 370 PNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
PNLPDLH+ GA P+L + ++E L DGYINE G +NLKR +L L+ F+ F +
Sbjct: 294 PNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKD 353
Query: 430 YADIQYLEGKM 440
D+++ ++
Sbjct: 354 DIDVEWFNKQL 364
Score = 307 bits (787), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 240/804 (29%), Positives = 383/804 (47%), Gaps = 58/804 (7%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
+E E +T + F + K +YYH KL + + E +RD A+ Y+ +QW L+YYY GC S
Sbjct: 495 EELETEKTIYNERFERWKHEYYHDKLKFTTDSEEKVRDLAKDYVEGLQWVLYYYYRGCPS 554
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
WSWYYPHHYAP ISD+ ++++++ +PF PFQQL+AVLP SK L+P ++ LM
Sbjct: 555 WSWYYPHHYAPRISDLVKGLDQDIEFDLSKPFTPFQQLMAVLPERSKNLIPPTFRPLMYD 614
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
E SPI ++YP E D NGK DWEAVVLI F+DE +LI+AM L+ EE++RN+ G
Sbjct: 615 EQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVDEKRLIEAMQPYLCKLSPEEKTRNQFG 674
Query: 671 PMLVYTYSNV--NLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL 728
L+Y+++ N+ + F I NH VEK I + +++R GL + L
Sbjct: 675 KDLIYSFNPQVDNIYKSPLGGIFSDIEHNHCVEKEYIT--IPLDSSEIRYGLLPNAKLGA 732
Query: 729 -YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQD--KVQVPSLKQVADQILGK 784
+ FPTL + FT +E + VFQQPS+ +S+++ + D K +L+ + + L K
Sbjct: 733 EMLAGFPTLLSLPFTSSLEYNETMVFQQPSKQQSMVLQITDIYKTNNVTLEDFSKRHLNK 792
Query: 785 TIFINYPHLIEIRVQAVATKDSRISF---DKNSGPVFERAAK--DMQDA--FQLSKKSIT 837
I+ +P+L E ++ V+ D + + + N F K + QD F K S+
Sbjct: 793 VIYTRWPYLRESKL--VSLTDGKTIYEYQESNDKKKFRFITKPAETQDKKLFNSLKNSML 850
Query: 838 DGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQ-----RTFIRSTVTYAYQSAV 892
Y + V IG PVE+ F G V +TF + Y Q V
Sbjct: 851 RMYAKQKAVKIG---------PVEAIATVFPVTGLVRDSDGGYIKTFSPTPDYYPLQLVV 901
Query: 893 LNLQQARESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFK-V 948
++ E + + I+E F + L + YG + + I + K +
Sbjct: 902 ESVVNEDERYKERGPIPIEEEFPLNSKVIFLGDYAYGGETTIDGYSSDRRLKITVEKKFL 961
Query: 949 QQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIG 1008
EP + D Y PSY VA + + PL LS+ T I D+T K N+G
Sbjct: 962 DSEPTIGKERLQMDHQAVKYYPSYIVAKNMHLHPLFLSKITSKFMITDAT---GKHINVG 1018
Query: 1009 LNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLR 1068
+ +KF ++++V+G+ RR+ + W Y+ + L+K Y + FP+ F F +DI +
Sbjct: 1019 IPVKFEARHQKVLGYARRN--PRGWEYSNLTLNLLKEYRQTFPDFF-FRLSKVGNDIPVL 1075
Query: 1069 DDVFPHQGEQRVAQIVS----WLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE 1124
+D+FP + ++ WLK V ++ + ++ +H + +E
Sbjct: 1076 EDLFPDTSTKDAMNLLDGIKQWLKYVSSKFIAVSLESDSLTKTSIAAVEDHIMKYAANIE 1135
Query: 1125 ----KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI 1180
KQ+ V + P+ + L KF L DRVV I+D VP+ +GT++G
Sbjct: 1136 GHERKQLAK-VPREAVLNPRSSFALLR---SQKFDLGDRVVYIQDSGKVPIFSKGTVVGY 1191
Query: 1181 VQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPHVK 1238
+S V+FD G R +RG + A ++N++ + +S K
Sbjct: 1192 TTLSSSLSIQ--VLFDHEIVAGNNFGGRLRTNRGLGLDASFLLNIT-NRQFIYHSKASKK 1248
Query: 1239 NINVMQSRGERNTNYAQVTRQPQR 1262
+ + RN N + P +
Sbjct: 1249 ALEKKKQSNNRNNNTKTAHKTPSK 1272
Score = 173 bits (439), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 102/129 (79%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P + +++ QIPEFDNLYLDMN I+HNC+H ND+D R+TE+++
Sbjct: 1 MGIPKFFRYISERWPMILQLIEGTQIPEFDNLYLDMNSILHNCTHGNDDDVTKRLTEEEV 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F I YI+ LF+ I+PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA E G+
Sbjct: 61 FAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALKKAIENGD 120
Query: 121 RLPTEKRFD 129
+P + FD
Sbjct: 121 EIPKGEPFD 129
>gi|336472444|gb|EGO60604.1| hypothetical protein NEUTE1DRAFT_127448 [Neurospora tetrasperma
FGSC 2508]
gi|350294329|gb|EGZ75414.1| 5'-3' exoribonuclease 1 [Neurospora tetrasperma FGSC 2509]
Length = 1226
Score = 325 bits (834), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/441 (41%), Positives = 243/441 (55%), Gaps = 119/441 (26%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + +D
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDTSD---------- 50
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ FRM + + F+AI
Sbjct: 51 ---------VQFRMTEEE--MFIAI----------------------------------- 64
Query: 121 RLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F PKKLFFMAIDGVAPRAKMNQQR RRFR+A + E KA
Sbjct: 65 -------FNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTALDNEKARDKAIR 117
Query: 179 KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVIL 238
+G+ LP E+ FDSNCITPGT FM +L QQLRYF+ K++ D+ W+ ++L
Sbjct: 118 EGKELPKEEPFDSNCITPGTEFMAKLSQQLRYFIHKKVSEDRDWQQPE---------IVL 168
Query: 239 SGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
SGHE PGEGEHKIM+YIR +++ DY+ N+RHCLYGLDADLIMLGL +H+P+F LLREEV
Sbjct: 169 SGHEVPGEGEHKIMEYIRNARAQLDYDANVRHCLYGLDADLIMLGLLSHDPHFCLLREEV 228
Query: 299 KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F K ++ + EE F+L+HL ++R+YLELEF LK+PG +
Sbjct: 229 TFGRGPAKHKAKGL--EEQNFYLMHLCIVREYLELEFQDLKKPGAM-------------- 272
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
+Y+E+LP DGYINEGG +NL+R L +L
Sbjct: 273 -----------------------------IYKEILPRGDGYINEGGKVNLQRLGLLLEEL 303
Query: 419 ASFDFEQFREKYADIQYLEGK 439
++ F ++ D +L K
Sbjct: 304 GKEEYRFFEHEHEDQSWLRAK 324
Score = 172 bits (436), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 163/590 (27%), Positives = 270/590 (45%), Gaps = 49/590 (8%)
Query: 691 FPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNL-KLYVTHFPTLKHVQFTHKIENAK 749
FP I H +E D V + R GL L + + FP+L + +T +
Sbjct: 471 FPPIPHCHCIENIF--DLPPVEGLEYRVGLTDGALLNESALAGFPSLATLPYTASLGFHG 528
Query: 750 VKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATK--DSR 807
V VFQ SRN+S+++ + + + A + LGK F+ YP L E ++ V+ + D
Sbjct: 529 VNVFQSESRNQSMVVNILDTEKRTNVEEAKRKLGKRCFVGYPFLQEAKIVGVSDELFDYH 588
Query: 808 ISFDKNSGPVFER--AAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKY 865
++ D SG V R + +D++ + + + I + Y +LG+ IG E LV+ + +
Sbjct: 589 LAED-GSGQVVSRNHSPRDIEQWGKTAHR-IENFYSKRLGILIGQVESLVHVHML--KGL 644
Query: 866 FFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESLEYKT---IDEIFYPGCQCFALS 921
G ++ I T YA Q V + E + ++E F F L
Sbjct: 645 MKTDEGATIKEYGPIPGMETDYAAQIIVDEVVNEDERFIERAALPLEEEFPIKSVGFFLG 704
Query: 922 NPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSIS 981
+YG + + L+ ++EPD + + L +YLPSY VA L +
Sbjct: 705 EFNYGRP-VEVEGYSNNKLVVWLAALKEREPDFARQIILDAQRDNHYLPSYMVAKDLGLH 763
Query: 982 PLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVT 1041
L LS+ T S +I T G R N+GLN+KF K ++V+G++R+ ET W ++
Sbjct: 764 SLALSKITSSYYI---TTLGGLRVNLGLNLKFEGKKQKVLGYSRKSETG--WEFSMAARA 818
Query: 1042 LIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ--GEQRVAQIVSWLKEQPHAKAEVRP 1099
++ YM +FP+ F +K H S D++P RV +I +WLK ++ E P
Sbjct: 819 MLVEYMTKFPDFFAAVKQHPSSAELTETDLWPEPAVASARVKEIGAWLKTLKTSQMERVP 878
Query: 1100 CGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTK-----F 1154
A +D+ VV + D + + PN +P+ L + C D + + F
Sbjct: 879 LDAEQLDSDVVMRLAAEADRLQLGQLAAANKKMPN---VPRNALLRPC-DAEHRLGNQHF 934
Query: 1155 KLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRG 1212
L DRVV + + VP+ YRGT++GI + T+ + DVVFD F G + RC RG
Sbjct: 935 SLGDRVVYVAEVGKVPIAYRGTVVGISRVPTA--KLLDVVFDVTFMSGTTLGERCPPFRG 992
Query: 1213 YRMPAQAMINLSYGERLCGN--------SNPHVKNINV-----MQSRGER 1249
+P+ +NL++ + + G+ +NP V + MQ+ G++
Sbjct: 993 QTVPSHTCLNLTHRQIVVGSKAAMARQPTNPSVTTLTAHGGYGMQANGKQ 1042
>gi|156845531|ref|XP_001645656.1| hypothetical protein Kpol_541p40 [Vanderwaltozyma polyspora DSM
70294]
gi|156116322|gb|EDO17798.1| hypothetical protein Kpol_541p40 [Vanderwaltozyma polyspora DSM
70294]
Length = 1521
Score = 325 bits (834), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 151/304 (49%), Positives = 216/304 (71%), Gaps = 12/304 (3%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKK F+MAIDGVAPRAKMNQQR RRFRSA +AE +KA E G+ LP + FD+N ITPG
Sbjct: 78 PKKKFYMAIDGVAPRAKMNQQRSRRFRSAMDAENAMKKAIENGDELPKGEPFDTNSITPG 137
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L + ++YF+ KI++D W+++ +I SGHE PGEGEHKIMD+IR
Sbjct: 138 TEFMAKLTKNIKYFIHNKISSDS---------NWRNIEIIFSGHEVPGEGEHKIMDFIRS 188
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF-NTKSNKGGSQIVTPEE 316
++S Y+PN RHC+YGLDADLIMLGL TH+P+F+LLREEV+F N +++ S + ++
Sbjct: 189 IRSLDTYDPNTRHCIYGLDADLIMLGLSTHDPHFALLREEVRFGNQRNSSNNSTLSALDK 248
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F+LLHLSL+R YL LEF ++ + ++F + E ++DD++L+ F+IGNDF+PNLPDLH
Sbjct: 249 QNFYLLHLSLLRQYLNLEFKEVADG--INFKYDFEKVLDDFILIMFVIGNDFLPNLPDLH 306
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL 436
+ GA P++ + ++E L LDG+INE G +NL+R +L L+ F+ F + D+++
Sbjct: 307 LNKGAFPVILQTFKEALLHLDGHINENGKINLQRLSVWLNYLSQFELMNFEKDDIDVEWF 366
Query: 437 EGKM 440
++
Sbjct: 367 NKQL 370
Score = 273 bits (699), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 234/810 (28%), Positives = 372/810 (45%), Gaps = 49/810 (6%)
Query: 442 KKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYY--YSDEDEEWRTN 499
KKFS+ E +E+D + + ++ D +E N+ E +SD E TN
Sbjct: 489 KKFSNAILVEDQEELDTEQEIYNERFENWKTDYYKEKFNFFQKERVLKPFSDSSE---TN 545
Query: 500 FFSEFGQHKTDYYHYKLDYAKVTNE-VLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHH 558
E K +Y +E L + + Y+ +QW L+YYY GC SW+WYY +H
Sbjct: 546 EQEEHSIESEFIDRPKFEYIITDDENKLTELCKNYVEGLQWVLYYYYRGCPSWNWYYKYH 605
Query: 559 YAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEY 618
YAP ISD+ +++ PF PF+QL+AVLP SK L+P + LM E SPIL+
Sbjct: 606 YAPRISDLTRGLDQTTSFDLSNPFTPFEQLMAVLPERSKNLIPPVLRPLMYEEISPILDL 665
Query: 619 YPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS 678
YP E D NGK DWEAVVL+PF+DE +LI AM L+ EE+ RN+ G L + +S
Sbjct: 666 YPNEVELDKNGKTADWEAVVLLPFVDENRLIDAMKPHLAKLSPEEKERNQFGKDLTFMFS 725
Query: 679 ---NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNL-KLYVTHFP 734
+ T L F I NH VE + I H +K+R GL + + K + FP
Sbjct: 726 PQVDEVYKTPLG-GLFNDIEHNHCVEIEFKLEKI--HNDKIRYGLLPNAKIGKDLLAGFP 782
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSL--KQVADQILGKTIFINYP 791
+L + F + +E + VFQQPSR +S+++ +Q+ + ++ ++ L K ++ +P
Sbjct: 783 SLFTIPFKNNLEYNETTVFQQPSRQQSMVLKIQNIYEENNMTAEEFGSAYLNKIVYTKWP 842
Query: 792 HLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLS-KKSITDGYYTKLGVDIGN 850
+L E +V V + + D NSG R D + ++ + SI Y V++G
Sbjct: 843 YLRESKVLEVFNEHQMMEVDINSGKSKSRPLNDSERKLYMNLRSSIFKNYNKSKAVNVGK 902
Query: 851 TEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYK---TI 907
+V PV G +T+ + Y Q V + E K I
Sbjct: 903 VSTIVKVLPVNG--LMRDTDGAYI--KTYSNESEYYPLQLVVETVSNVDERYLEKPPQPI 958
Query: 908 DEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFK---VQQEPDLSDLVHLQDDT 964
+E F G + L + Y GG ++ +KLS + ++ EP + D
Sbjct: 959 EEEFPQGSKVIFLGD--YAYGGTATIDGYSSSTRLKLSVEKRSLRSEPTIGKSRCNIDKD 1016
Query: 965 VYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFT 1024
+ Y PSY VA L + L LSR T + D N+G+ IKF ++++V+GF
Sbjct: 1017 MVKYQPSYVVARNLKLQSLFLSRLTSKFLVADI---NGSHVNVGIPIKFEARSQKVLGFA 1073
Query: 1025 RRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFL-KDHSSDDIYLRDDVFPH----QGEQR 1079
R++ + W ++ V L+ Y K FP+ L + ++ D + ++++P +
Sbjct: 1074 RKN--PRGWEFSNLAVDLLVAYRKNFPDFIEKLSRVNTRDKLPSIEELYPELDKAKASAL 1131
Query: 1080 VAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSL---IEHAVDTCEKVEKQITLFVKPNKL 1136
+A + SW+K V ++ A ++++ IE E+ E + V +
Sbjct: 1132 LANVKSWIKSVTDPFVTVSLQSDSLTKASILAVEDFIEPYSKLPEESETKHLAKVPREAV 1191
Query: 1137 YIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFD 1196
PK + L +F L DRVV I+D VPL +GT++G V+FD
Sbjct: 1192 LDPKSSFTLLR---SQRFDLGDRVVYIQDTGKVPLFSKGTVVGYTTLGQRLSVQ--VLFD 1246
Query: 1197 KPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
G K R +RG + A ++N++
Sbjct: 1247 HEIVSGNKFGGRLRTNRGLGLDASFLLNIT 1276
Score = 173 bits (439), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 102/130 (78%), Gaps = 1/130 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDP-HFRITEKQ 59
MG+PKFFRYISER+P + +++ QIPEFDNLYLDMN I HNC+H ND D R++E++
Sbjct: 1 MGIPKFFRYISERWPTILQLIENDQIPEFDNLYLDMNSIFHNCTHGNDIDSTKRRLSEEE 60
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+FQ+IF+YI+ LF I+PKK F+MAIDGVAPRAKMNQQR RRFRSA +AE +KA E G
Sbjct: 61 VFQNIFNYIDHLFNTIKPKKKFYMAIDGVAPRAKMNQQRSRRFRSAMDAENAMKKAIENG 120
Query: 120 ERLPTEKRFD 129
+ LP + FD
Sbjct: 121 DELPKGEPFD 130
>gi|156084528|ref|XP_001609747.1| XRN 5'-3' exonuclease protein [Babesia bovis T2Bo]
gi|154796999|gb|EDO06179.1| XRN 5'-3' exonuclease protein, putative [Babesia bovis]
Length = 988
Score = 321 bits (823), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 210/596 (35%), Positives = 309/596 (51%), Gaps = 77/596 (12%)
Query: 128 FDFIT--LKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA----EVLEQKAKEKGE 181
FD++ + P+K+ F+AIDGVAPRAKMNQQR RRF+SA EA E+ + A E +
Sbjct: 85 FDYLDRLMYIIRPRKILFLAIDGVAPRAKMNQQRSRRFKSAAEADLEAEIYSKVAAEFAQ 144
Query: 182 RL----PTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVI 237
R P E R+DSN ITPGTPFM L +++ ++K + +D W + VI
Sbjct: 145 RNVRIPPKESRWDSNVITPGTPFMHELSKRVVAYIKER-------RDMYE--AWSRIHVI 195
Query: 238 LSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE 297
S +PGEGEHKIM++IR + Y+PN +H L+G+DADLIMLGL THE F ++RE
Sbjct: 196 YSDANSPGEGEHKIMNFIRNQRHSDQYDPNTKHVLHGMDADLIMLGLATHEVNFYIIREI 255
Query: 298 VKFNTKSNKGGSQI---VTPEETK--------------------FFLLHLSLMRDYL--E 332
V + K +I + +T L L ++R+YL +
Sbjct: 256 VSNLNPTKKAEDEIRKSIAVAQTSRPQLKDIKSYRSMLRQNWKPLQFLRLPVLREYLSHQ 315
Query: 333 LEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEV 392
L F + G S P E IDD VLM F GNDF+P+LP + I G++ + +YQ +
Sbjct: 316 LYFPRGWSRGN-SGPIDFERCIDDLVLMCFFCGNDFLPHLPSISIQGGSIDQMILLYQSL 374
Query: 393 LPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEK 452
LP L Y+ G +N + F++ +A+ + + F+ + E K +K + H
Sbjct: 375 LPDLGDYLTNEGEINFPQLGAFVSYIANVEDQVFKAEQ------EFKQRQKMRRLQHSGD 428
Query: 453 SKEMDPDLAALIKATDDDYDDGTEEVLNYAN-------------------YEEYYYSDED 493
+ E ++ + TD D + G E VL + ++ D+
Sbjct: 429 NTENKDQVS---RPTDFD-NAGGETVLKNQDSSTLNNGLEIEFKKRCAELLKQEREVDDP 484
Query: 494 EEWRTNFFSEFGQHKTDYYHYKLDYAKVTN--EVLRDQAECYIRAIQWNLHYYYNGCVSW 551
E ++ + K YY K + + E A YI+ + W L YYY GC SW
Sbjct: 485 VEPIDLSLNDPVRWKETYYRKKFGLCESQDVWEFASQVANHYIKGMCWVLRYYYQGCTSW 544
Query: 552 SWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLE 611
WYYP HYAP+ SD+ +F L ++ G+PF PFQQL++V+P S LPE ++LMT
Sbjct: 545 GWYYPFHYAPFCSDL-NFEGLEFTFDYGKPFTPFQQLMSVMPIRSSHCLPEQLRHLMTDT 603
Query: 612 NSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
+SPI ++YP +F D NGK+ ++ V L+PFIDE KL+ + +E +L E + RN
Sbjct: 604 DSPIADFYPIKFDEDPNGKRYKYQWVALLPFIDEKKLLNLVIPIEAILPKELQDRN 659
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 92/161 (57%), Gaps = 36/161 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE--------------YQIP--------EFDNLYLDMNG 38
MGVP F+R++ RYP + ++ Y + EFDNLY+DMNG
Sbjct: 1 MGVPTFYRWLCSRYPRVVHDAKDDSNENNFDFSDLESYGLALLSPNPNGEFDNLYIDMNG 60
Query: 39 IIHNCSHPN--DNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQ 96
+IH C HP + P +E+ +FQ IF Y++ L +I+P+K+ F+AIDGVAPRAKMNQ
Sbjct: 61 LIHPCCHPEGLEQPP----SEEVMFQCIFDYLDRLMYIIRPRKILFLAIDGVAPRAKMNQ 116
Query: 97 QRGRRFRSAK----EAEVLEQKAKEKGERL----PTEKRFD 129
QR RRF+SA EAE+ + A E +R P E R+D
Sbjct: 117 QRSRRFKSAAEADLEAEIYSKVAAEFAQRNVRIPPKESRWD 157
>gi|367015260|ref|XP_003682129.1| hypothetical protein TDEL_0F01070 [Torulaspora delbrueckii]
gi|359749791|emb|CCE92918.1| hypothetical protein TDEL_0F01070 [Torulaspora delbrueckii]
Length = 1471
Score = 320 bits (821), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 155/311 (49%), Positives = 214/311 (68%), Gaps = 18/311 (5%)
Query: 130 FITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRF 189
F T+K PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA GE +P + F
Sbjct: 72 FHTIK---PKKVFYMAIDGVAPRAKMNQQRARRFRTAMDAEKAFEKAVANGEEIPKGEPF 128
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSN ITPGT FM +L + L+YF+ KIT D W+D+ VI SGHE PGEGEH
Sbjct: 129 DSNSITPGTEFMAKLTKNLQYFIHDKITNDS---------KWRDIDVIFSGHEVPGEGEH 179
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGS 309
KIMD+IR ++++ D++ N RHC+YGLDADLIMLGL H+P+F+LLREEV F +S+ S
Sbjct: 180 KIMDFIRNLRAQKDFDSNTRHCIYGLDADLIMLGLSVHDPHFALLREEVVFGRRSSTAKS 239
Query: 310 QIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFI 369
E F+LLH+S++R+Y++LEF ++ + L F + E I+DD++L+ F+IGNDF+
Sbjct: 240 L----ENQNFYLLHISILREYMQLEFQEIADE--LQFDYDFERILDDFILVMFVIGNDFL 293
Query: 370 PNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
PNLPDLH+ GA P+L + ++E L +DGYINE G +NL+R +L L+ F+ F
Sbjct: 294 PNLPDLHLNKGAFPVLLQTFKEALLHVDGYINEHGQINLERLGVWLEYLSKFEQMNFERS 353
Query: 430 YADIQYLEGKM 440
D+ + ++
Sbjct: 354 DVDVDWFNQQL 364
Score = 278 bits (710), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 220/747 (29%), Positives = 359/747 (48%), Gaps = 48/747 (6%)
Query: 504 FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYI 563
F Q K YY KL ++ E L + Y+ +QW L+YYY GC SW WYY HHY+P I
Sbjct: 507 FAQWKDKYYKDKLGFSFNETEKLTKLCQNYVEGLQWVLYYYYRGCQSWGWYYRHHYSPRI 566
Query: 564 SDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEF 623
SD+K + +E G PF PFQQL+AVLP SK L+P + LM ENSPI ++YP+E
Sbjct: 567 SDLKLGLDQVISFEKGHPFTPFQQLMAVLPERSKNLIPTALRPLMFNENSPIRDFYPKEV 626
Query: 624 ATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS---NV 680
D NGK DWEAVVL+ F+DE +LI AM L+ EE+ RN G L+Y ++ +V
Sbjct: 627 DLDKNGKTADWEAVVLLSFVDEHRLIDAMAPYLPRLSPEEKVRNGVGKDLIYYFNPQVDV 686
Query: 681 NLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLK-LYVTHFPTLKHV 739
+ L+ F I +H VE+ I ++ R GL + + FP+L+ V
Sbjct: 687 LYKSPLS-GIFSDIEHDHCVEREFTPPQI--EESQFRYGLLPGAKVGPNLLAGFPSLETV 743
Query: 740 QFTHKIENAKVKVFQQPSRNESIII-VQDKVQV--PSLKQVADQILGKTIFINYPHLIEI 796
F ++ + VFQQPS+ +S+++ VQ+ + +L+ ++ + L K ++ +P L E
Sbjct: 744 PFRGELAYNETWVFQQPSKQQSMVLNVQNIYEENNVTLEDLSKRFLNKVVYTRWPFLRES 803
Query: 797 RVQAVATKDSRISFDK---NSGPVFERAAKDMQ-DAFQLSKKSITDGYYTKLGVDIGNTE 852
++ V+ D ++K ++ + R A D + F+ K S Y V +
Sbjct: 804 KL--VSITDGHKVYEKSEASNAKIVIRPADDSEVKLFKSLKSSTVRNYSKDKAVSLKKVN 861
Query: 853 VLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESL---EYKTIDE 909
+V PV RG + F Y Q V ++ E E ID+
Sbjct: 862 AIVKVLPVTDLAR--NARGAFV--KMFSSEPEYYPLQLMVDSVANEDERFIEREPAPIDQ 917
Query: 910 IFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFK---VQQEPDLSDLVHLQDDTVY 966
F G L + Y GG I ++ +KL+ K + EP + D+++
Sbjct: 918 EFPQGSHVIFLGD--YAYGGEAIIDGFSTSTRLKLTVKKASSRSEPTIGKERAKIDNSLV 975
Query: 967 NYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRR 1026
Y PS+ V+ +L + PL LS+ T + +S+ + N+G+ IKF ++E+V+G+ RR
Sbjct: 976 KYFPSFVVSKRLQLHPLFLSKITAKFLVANSS---GRHTNVGIPIKFEARHEKVLGYARR 1032
Query: 1027 DETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVS- 1085
+ + W ++ + LI++Y + F + F L S +I +++P + +I+
Sbjct: 1033 N--PRGWEFSSLAIQLIEDYRRTFHDFFTRLSQTRS-NIPSIGELYPELTNDKSDRILED 1089
Query: 1086 ---WLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAV---DTCEKVEKQITLFVKPNKLYIP 1139
WLK +V ++ + ++ EH + +KVEK+ V + + P
Sbjct: 1090 VKKWLKTATEKFVKVSLESDSLTKVSMQAVEEHILTYSSYLDKVEKKQLAKVPCDAVLDP 1149
Query: 1140 KPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIG--IVQGETSYDAMYDVVFDK 1197
K + L KF L DRVV ++D VPL +GT++G + S ++D
Sbjct: 1150 KTSFAMLR---GQKFDLGDRVVYVQDSGKVPLFSKGTVVGYTTLGSRLSIQVLFDNEIVA 1206
Query: 1198 PFPHGVKIRCSESRGYRMPAQAMINLS 1224
G ++R +RG + A ++N++
Sbjct: 1207 ANKFGGRLRT--NRGLGLDASFLLNIT 1231
Score = 174 bits (440), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 101/129 (78%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFRYISER+P + +++ QIPEFDNLYLDMN I+HNC+H ND+D R+TE+++
Sbjct: 1 MGIPKFFRYISERWPLILQLIEGSQIPEFDNLYLDMNSILHNCTHGNDDDVTKRMTEEEV 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F I+ YI+ LF I+PKK+F+MAIDGVAPRAKMNQQR RRFR+A +AE +KA GE
Sbjct: 61 FAKIYAYIDHLFHTIKPKKVFYMAIDGVAPRAKMNQQRARRFRTAMDAEKAFEKAVANGE 120
Query: 121 RLPTEKRFD 129
+P + FD
Sbjct: 121 EIPKGEPFD 129
>gi|254571933|ref|XP_002493076.1| Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA
metabolism [Komagataella pastoris GS115]
gi|238032874|emb|CAY70897.1| Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA
metabolism [Komagataella pastoris GS115]
gi|328352909|emb|CCA39307.1| 5'-3' exoribonuclease 2 [Komagataella pastoris CBS 7435]
Length = 994
Score = 320 bits (821), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 182/460 (39%), Positives = 257/460 (55%), Gaps = 93/460 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------------YQIP----EFDNLYLDMNGIIHN 42
MGVP FR++S +YP +S V+++ Y+ P E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVIQDEDVDIDGESRPTRYEDPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP ++ P TE ++ D+F Y E + M +P+K+ ++A+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHP-EHKP-VPETEDEMMLDVFAYTENVIMMARPRKVIYIAVDGVAPRAKMNQQRSRRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A + A EK
Sbjct: 119 RSAQDA----KDANEK-------------------------------------------- 130
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
A E + +E+K + + + +K +DSN ITPGTPFM RL LRY+ K+TTD
Sbjct: 131 --KAAELKEMEKKGEIIDDAIKNKKTWDSNAITPGTPFMHRLADSLRYWAAYKLTTDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
W + VI+S PGEGEHKIM Y+R ++S P ++PN HC+YGLDADLI L
Sbjct: 187 -------GWSGIEVIISDASVPGEGEHKIMSYVRSLRSSPKHDPNTTHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEVKFNTKSNKG----------GSQIVTPEETKFFLLHLSLMRDYLE 332
GL THEP+F +LRE+V K + Q + ++T F LHL+++R+YL+
Sbjct: 240 GLATHEPHFKILREDVFAQDKKSYSLQDQLRMTDIERQELKDKKTPFLWLHLNILREYLQ 299
Query: 333 LEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEV 392
+E L PG LSFPF +E IDDWV + F GNDF+P+LP L + + ++ L +++++
Sbjct: 300 IE---LNVPG-LSFPFDLEKSIDDWVFICFFCGNDFLPHLPSLDVRDNSITTLVTIWKQI 355
Query: 393 LPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
LPT+ GY+ GYLNL E+ L +LA + FR++Y D
Sbjct: 356 LPTMKGYLTTDGYLNLPAVERLLAELAKKEDYIFRKRYED 395
Score = 160 bits (405), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 104/144 (72%)
Query: 524 EVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFL 583
++ R+ + YI + W L YYY GC SW+WYYP+HYAP+ +D + S L +++ G PF
Sbjct: 561 KIARNMVQKYIEGVSWVLLYYYQGCPSWNWYYPYHYAPFAADFVNLSELKIEFVEGTPFR 620
Query: 584 PFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFI 643
P++QL++VLPAAS LP+ +++LM+ NS I+++YPEEF D+NGKK W+A+ L+PFI
Sbjct: 621 PYEQLMSVLPAASSHNLPDVFRSLMSDANSEIIDFYPEEFPLDMNGKKVIWQAIPLLPFI 680
Query: 644 DEVKLIKAMDAVEHLLTDEERSRN 667
DE +L+KA+ + LT++E+ RN
Sbjct: 681 DENRLLKAVQSKYDQLTEDEKFRN 704
>gi|13605795|gb|AAK32883.1|AF367296_1 AT5g42540/K16E1_1 [Arabidopsis thaliana]
gi|20147139|gb|AAM10286.1| AT5g42540/K16E1_1 [Arabidopsis thaliana]
Length = 813
Score = 320 bits (819), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 213/632 (33%), Positives = 321/632 (50%), Gaps = 115/632 (18%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK------ 179
FD+I F P+KL FMAIDGVAPRAKMNQQR RRFR+AK+A + ++
Sbjct: 84 FDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARRFRAAKDAAEAAAEEEQLREEFER 143
Query: 180 -GERLP---TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
G++LP + FDSN ITPGT FM L LRY++ +++ +D WK++
Sbjct: 144 EGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYIHVRLNSDP---------GWKNIK 194
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR K+ P YNPN HCLYGLDADLIML L THE +FS+LR
Sbjct: 195 VILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIMLSLATHEIHFSILR 254
Query: 296 EEVKFNTKSNKG---------------------GSQIVTPE-----ETKFFLLHLSLMRD 329
E V F + K G + E + + +++ ++R+
Sbjct: 255 EVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVVKKPYEFVNIWILRE 314
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YLE + ++ PG +++ +IDD++ + F +GNDF+P++P L I GA+ LL VY
Sbjct: 315 YLEHD---MQIPGAKK---NLDRLIDDFIFICFFVGNDFLPHMPTLEIREGAIELLMSVY 368
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFH 449
+ + Y+ + LNL+ E+F+ + ++ + F +K A +Q ++ S+ F
Sbjct: 369 KNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIF-QKRAQVQ-------QRQSERFR 420
Query: 450 KEKSKEMDPDLAA---------LIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNF 500
++K+++ D A K D D + L+ + +Y D+
Sbjct: 421 RDKARDKARDNARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGVAN 480
Query: 501 FSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECY-----------IRAIQWNLHYY----- 544
K + + D ++LRD+ + + + + W YY
Sbjct: 481 VETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGNGEQDKVKLNKVGWRERYYEEKFA 540
Query: 545 -----------------YNGCVSWSWYY------------PHHYAPYISDIKDFSHLNLK 575
Y + W +Y P+HYAP+ SD+K L++K
Sbjct: 541 AKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIK 600
Query: 576 YEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWE 635
+E+G PF PF QLLAVLP+AS LPE Y++LMT +SPI ++YP +F D+NGK+ W+
Sbjct: 601 FELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRYSWQ 660
Query: 636 AVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
+ +PF++E +L++A VE LT+EE RN
Sbjct: 661 GISKLPFVEEKRLLEAAAQVEKSLTNEEIRRN 692
Score = 120 bits (302), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 78/124 (62%), Gaps = 23/124 (18%)
Query: 1 MGVPKFFRYISERYPC-LSEVVRE---------YQIP-----------EFDNLYLDMNGI 39
MGVP F+R++ +RYP + EV+ E IP E+DNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 40 IHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
IH C HP D TE +FQ +F YI+ LF M++P+KL FMAIDGVAPRAKMNQQR
Sbjct: 61 IHPCFHPEDKPSPTTFTE--VFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRA 118
Query: 100 RRFR 103
RRFR
Sbjct: 119 RRFR 122
>gi|123469987|ref|XP_001318202.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121900955|gb|EAY05979.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 797
Score = 318 bits (815), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 240/751 (31%), Positives = 351/751 (46%), Gaps = 169/751 (22%)
Query: 1 MGVPKFFRYISERYPCL-SEVVREYQ----------IP--------EFDNLYLDMNGIIH 41
MGVP FFR +S +YP + S + ++ +P EFD LYLDMNG+IH
Sbjct: 1 MGVPAFFRTLSRKYPLIISNCIEPHETNGHYLPNASLPNPNTIGDREFDCLYLDMNGLIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP +G+ P
Sbjct: 61 PCFHP---------------------------------------EGLPP----------- 70
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
EAEVL Q + ERL F+ ++ P+++ FMAIDG APRAKMNQQR R
Sbjct: 71 --PKSEAEVL-QNIENYIERL-------FMIVR---PRQILFMAIDGPAPRAKMNQQRKR 117
Query: 162 RFRSAKEAE----VLEQKAKEKGE-RLPTE-------KRFDSNCITPGTPFMCRLHQQLR 209
RF +AK+A + KA++ GE L E K DSN ITPGT F RL + L
Sbjct: 118 RFFAAKQAAHDRWIKYWKAQKSGETELAAELYNPDYLKNHDSNVITPGTLFFERLSKHLH 177
Query: 210 YFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMR 269
F++ K TD W +CVILS PGEGEHKIMD++R + +P Y+ N
Sbjct: 178 GFIQRKQETDP---------AWGKICVILSDASVPGEGEHKIMDFVRAQRLEPQYDSNRH 228
Query: 270 HCLYGLDADLIMLGLCTHEPYFSLLREEV-------KFNTKSNKGGSQ----------IV 312
H +YGLDAD+I LGL +HEPY+++LRE + + N++ K +
Sbjct: 229 HVIYGLDADIIFLGLASHEPYWTILRERINEAKDLPRQNSQQKKATEEDEKMALHHQIFD 288
Query: 313 TPEETK---------FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFL 363
PEE + F + L ++R YLE + P L P+ +E IDD++ + +
Sbjct: 289 APEEKEKVDLIGPKHFDFVSLWILRQYLERDLKPRNLPPNL--PWDLERAIDDFIFICYG 346
Query: 364 IGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDF 423
GNDFIP LP I G + + +Y+ LP + Y+ G ++ RF+ F+ +
Sbjct: 347 CGNDFIPTLPGFSIAEGTVSDIICLYKNNLPRYNAYLTYNGQVDFPRFKDFMKLICD--- 403
Query: 424 EQFREKYADIQYLEGKMGKKFSDVFH----KEKSKEMDPDLAALIKATDDDYDD------ 473
+ G+ + + + H +++S+E++ + + +A D D D
Sbjct: 404 ----------ERRTGEYVFERNSLLHILCPEQRSEEIEKQVNKISQAPDPDIDQEPPTEA 453
Query: 474 -GTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAEC 532
+E N + Y E + ++ Q K YY K +A+ E+ + E
Sbjct: 454 EEKKEERKTKNIVPHVY----EGIKVTEETDLAQLKRVYYKQKF-HAETKEEIAKIVTE- 507
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYIS--DIKDFSHLNLKYEMGEPFLPFQQLLA 590
+ R + W L+YY +G +W W YP+H AP S D+ D + +++ G PFLP QL+A
Sbjct: 508 FTRGMIWTLNYYLHGTHNWDWSYPYHSAPCSSDWDLVDVNPATYQFDRGCPFLPLWQLMA 567
Query: 591 VLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEV---- 646
VLP S LPE Q LMT E SPI ++YP F+ DL G KQ ++ VL+PFI E
Sbjct: 568 VLPPQSAHALPEKMQFLMTNEKSPIKDFYPTTFSIDLEGAKQAYKGHVLVPFIGEANTDW 627
Query: 647 --KLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
++ M + LT EE RN+ P ++
Sbjct: 628 DKRISDVMKGTDLRLTYEEEQRNQFSPTYIF 658
>gi|68466241|ref|XP_722895.1| hypothetical protein CaO19.12150 [Candida albicans SC5314]
gi|68466536|ref|XP_722750.1| hypothetical protein CaO19.4681 [Candida albicans SC5314]
gi|74656669|sp|Q5AMG5.3|XRN2_CANAL RecName: Full=5'-3' exoribonuclease 2
gi|46444743|gb|EAL04016.1| hypothetical protein CaO19.4681 [Candida albicans SC5314]
gi|46444898|gb|EAL04170.1| hypothetical protein CaO19.12150 [Candida albicans SC5314]
Length = 968
Score = 318 bits (814), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 184/462 (39%), Positives = 255/462 (55%), Gaps = 90/462 (19%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE---------YQIP----EFDNLYLDMNGIIHNCSHP 46
MGVP FR++S +YP +S VV E Y+ P E DNLYLDMNGI+H CSHP
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEEEDHEIGGAKYENPNPNGEIDNLYLDMNGIVHPCSHP 60
Query: 47 NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 106
P TE ++F DIF Y + + M +P+K+ +A+DGVAPRAKMNQQR RRFR+AK
Sbjct: 61 EHKKPP--ETEDEMFLDIFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFRAAK 118
Query: 107 EAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 166
+AE+ K ++L E Q+R R
Sbjct: 119 DAEL-------KAKQLEIEV------------------------------QERELR---- 137
Query: 167 KEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTL 226
E++ K K K++DSN ITPGTPFM RL + LRY+V K+++D
Sbjct: 138 --GEIINDAIKGK-------KQWDSNAITPGTPFMDRLAEALRYWVAYKLSSDP------ 182
Query: 227 SLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCT 286
W ++ VI+S PGEGEHK+M +IR +S P Y+PN +HC+YGLDADLI LGL T
Sbjct: 183 ---GWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYDPNTKHCIYGLDADLIFLGLAT 239
Query: 287 HEPYFSLLREEV------KFNTK-----SNKGGSQIVTPEETKFFLLHLSLMRDYLELEF 335
HEP+F +LRE+V KF K +N G + ++ F LH++++R+YL++E
Sbjct: 240 HEPHFRVLREDVFASQDKKFTIKDQIADANSNGDTVAKEDKKPFLWLHVNVLREYLQVEL 299
Query: 336 GKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPT 395
+ +SFPF +E IDDWV + F GNDF+P+LP L + + + L + ++ LP
Sbjct: 300 FTPR----MSFPFELERAIDDWVFLCFFAGNDFLPHLPSLDVRDNGIDTLVQCWKRSLPI 355
Query: 396 LDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
L Y+ G LNLK E ++ LA + E F+ K+A Q E
Sbjct: 356 LKDYVTCDGKLNLKSVEVLMSNLAYKESEIFKNKHAAEQRRE 397
Score = 161 bits (408), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 116/181 (64%), Gaps = 8/181 (4%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCV 549
SD+ + W + + + K +HY+ D + + RD Y+ I W YYY GC
Sbjct: 536 SDDIKLWEPGYNKRYYEAK---FHYQSD--EEIEQTKRDVVRHYVEGIAWVALYYYQGCP 590
Query: 550 SWSWYYPHHYAPYISDIKDFSHL---NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQN 606
SW+WY+P+HYAP+ +D + L +K+++GEPF PF+QL++VLPAAS LP+ +++
Sbjct: 591 SWNWYFPYHYAPFAADFTNLEELFPEGVKFKLGEPFRPFEQLMSVLPAASGHTLPQVFRD 650
Query: 607 LMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSR 666
LM+ +S I+++YPEEF D+NGKK W+ + L+PFIDE +L+ A+ LLT +E+SR
Sbjct: 651 LMSNPDSEIIDFYPEEFEIDMNGKKMSWQGIPLLPFIDEKRLLDAVQKKYELLTPDEKSR 710
Query: 667 N 667
N
Sbjct: 711 N 711
>gi|238881714|gb|EEQ45352.1| 5'-3' exoribonuclease 2 [Candida albicans WO-1]
Length = 968
Score = 318 bits (814), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 184/462 (39%), Positives = 256/462 (55%), Gaps = 90/462 (19%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE---------YQIP----EFDNLYLDMNGIIHNCSHP 46
MGVP FR++S +YP +S VV E Y+ P E DNLYLDMNGI+H CSHP
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEEEDHEIGGAKYENPNPNGETDNLYLDMNGIVHPCSHP 60
Query: 47 NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 106
P TE ++F DIF Y + + M +P+K+ +A+DGVAPRAKMNQQR RRFR+AK
Sbjct: 61 EHKKPP--ETEDEMFLDIFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFRAAK 118
Query: 107 EAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 166
+AE+ K ++L E Q+R R
Sbjct: 119 DAEL-------KAKQLEIEV------------------------------QERELR---- 137
Query: 167 KEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTL 226
E++ K K K++DSN ITPGTPFM RL + LRY+V K+++D
Sbjct: 138 --GEIINDAIKGK-------KQWDSNAITPGTPFMDRLAEALRYWVAYKLSSDP------ 182
Query: 227 SLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCT 286
W ++ VI+S PGEGEHK+M++IR +S P Y+PN +HC+YGLDADLI LGL T
Sbjct: 183 ---GWANLQVIISDATVPGEGEHKLMNFIRSQRSDPQYDPNTKHCIYGLDADLIFLGLAT 239
Query: 287 HEPYFSLLREEV------KFNTK-----SNKGGSQIVTPEETKFFLLHLSLMRDYLELEF 335
HEP+F +LRE+V KF K +N G + ++ F LH++++R+YL++E
Sbjct: 240 HEPHFRVLREDVFASQDKKFTIKDQIAEANSNGDTVAKEDKKPFLWLHVNVLREYLQVEL 299
Query: 336 GKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPT 395
+ +SFPF +E IDDWV + F GNDF+P+LP L + + + L + ++ LP
Sbjct: 300 FTPR----MSFPFELERAIDDWVFLCFFAGNDFLPHLPSLDVRDNGIDTLVQCWKRSLPI 355
Query: 396 LDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
L Y+ G LNLK E ++ LA + E F+ K+A Q E
Sbjct: 356 LKDYVTCDGKLNLKSVEVLMSNLAYKESEIFKNKHAAEQRRE 397
Score = 158 bits (400), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 100/144 (69%), Gaps = 3/144 (2%)
Query: 527 RDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHL---NLKYEMGEPFL 583
RD Y+ I W YYY GC SW+WY+P+HYAP+ +D + L +K+++GEPF
Sbjct: 568 RDVVRHYVEGIAWVALYYYQGCPSWNWYFPYHYAPFAADFTNLEELFPEGVKFKLGEPFR 627
Query: 584 PFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFI 643
PF+QL++VLPAAS LP+ +++LM+ +S I+++YPEEF D+NGKK W+ + L+PFI
Sbjct: 628 PFEQLMSVLPAASGHTLPQVFRDLMSNPDSEIIDFYPEEFEIDMNGKKMSWQGIPLLPFI 687
Query: 644 DEVKLIKAMDAVEHLLTDEERSRN 667
DE +L+ A+ LLT +E+SRN
Sbjct: 688 DEKRLLDAVQKKYGLLTPDEKSRN 711
>gi|326429495|gb|EGD75065.1| hypothetical protein PTSG_06722 [Salpingoeca sp. ATCC 50818]
Length = 1402
Score = 318 bits (814), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 218/737 (29%), Positives = 369/737 (50%), Gaps = 31/737 (4%)
Query: 507 HKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI 566
+K +YY KL + +E QA+ Y+R +QW L YYY G SWSW++P HYAP++SDI
Sbjct: 463 YKANYYLEKLGVQRYDDEFRLSQAQEYVRGLQWILFYYYKGVPSWSWFFPSHYAPFVSDI 522
Query: 567 KDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ ++E+GEPF PF+QL++VLP AS++ +P YQ LM SPI+++YP+ F TD
Sbjct: 523 RAIEDFKPEFELGEPFSPFEQLMSVLPPASRDHVPPAYQPLMLDSQSPIIDFYPQTFKTD 582
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NVNLGTA 685
LNGK+ WEAVVLIPFID+ +L+ A+ ++ HLLTD E++RN+H + +S + L A
Sbjct: 583 LNGKRNAWEAVVLIPFIDQDRLLSAVHSLSHLLTDAEKNRNKHSLAKCFVHSASARLRVA 642
Query: 686 LA-PDYFPAINENHA--VEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFT 742
P +F A+ HA E P + GL + + Y FPT H+
Sbjct: 643 SPHPHHFAAVTA-HADFTEMPF----PHTPEGSPHVGLHPRFDHERYYPGFPTFVHLPHQ 697
Query: 743 HKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVA 802
A+VKVF S+++SI+++ Q+P + ++G+ I+ YPHLIE +V AV
Sbjct: 698 FITCKARVKVFNFESKSDSILVIPHS-QLPPVASELRHLVGQDIWTRYPHLIEAKVTAVW 756
Query: 803 TKDSRISFDKNSGPVFERAAKDMQDA-FQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVE 861
DS ++ V A + A F + K + + TK G+DIG +V+V E
Sbjct: 757 --DSHEKYEVRGRRVVSTALEHRDRAKFFHTAKRLQEDAKTKRGMDIGPVQVIVTVNLCE 814
Query: 862 SRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLE--YKTIDEIFYPGCQCFA 919
F G+V Q++++ + Q + +LQ +R++ K + E+
Sbjct: 815 GFVNDFQKDGRVYQRKSWSHQEQDFPLQLCIPDLQISRDTRNEAVKALREVIRADAPVCH 874
Query: 920 LSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLS 979
L HYG+ G V+ L V + P+++ L+ L + +P +L
Sbjct: 875 LGPLHYGATGHVVRVHHHTVDVELL---VPEAPNIARLLQL-NSASQQLVPLSEAGRRLH 930
Query: 980 ISPLLLSRFTGSIFIID-STEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQ 1038
+ L++ S+F+ S ++ ++++G ++KFS + E VG TRR +KWF T++
Sbjct: 931 MPEFFLNKLLASLFVFSGSADDQGTKYDLGFHMKFSGRGLEAVGLTRR--IDEKWFLTQR 988
Query: 1039 VVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKA-EV 1097
+ ++ ++ ++F + LK + D D++ + ++L++ + ++
Sbjct: 989 AIAIVDDFQRRFARILDPLKRNQYADRCYGADLYRFDASADLEAAQAYLRDTVKVRDFDL 1048
Query: 1098 RPCGAAVVDAKVVSLIEHA----VDTCEKVEKQITLFVKPNKLYIPKPTL--DKLCPDPD 1151
P G V+ ++V IE+ V + + + P+ L++ + PD
Sbjct: 1049 VPTGTEVLQKRIVHAIENLQQVFVSSKHPKPRVAIQGLSPSLLFLASTAGRNTSIPPDKQ 1108
Query: 1152 TKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESR 1211
FKL DRVV +RDC VP G ++ ++ + ++D F G C+
Sbjct: 1109 ASFKLGDRVVCVRDCAAVPWAAAGFVVRVLPESEEVEVVFDEEFMGGTLLGGL--CTRLA 1166
Query: 1212 GYRMPAQAMINLSYGER 1228
G RMP ++N+++G R
Sbjct: 1167 GARMPFTWLVNVTHGLR 1183
Score = 189 bits (479), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/122 (68%), Positives = 108/122 (88%), Gaps = 1/122 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PK++R+ISERYPCLS+VVRE ++P+FDNLYLDMNGIIH CSHP+D D +FR+TE+++
Sbjct: 1 MGIPKYYRWISERYPCLSQVVRESEVPDFDNLYLDMNGIIHTCSHPSD-DVNFRLTEEKM 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F+DI YIE LFR+I+P+++F+MAIDG APRAKMNQQR RRFRSAKEAE QKA+ +G+
Sbjct: 60 FEDICAYIETLFRIIRPQRVFYMAIDGCAPRAKMNQQRARRFRSAKEAEEARQKAEREGK 119
Query: 121 RL 122
L
Sbjct: 120 LL 121
>gi|241954112|ref|XP_002419777.1| 5'-3' exoribonuclease, putative [Candida dubliniensis CD36]
gi|223643118|emb|CAX41992.1| 5'-3' exoribonuclease, putative [Candida dubliniensis CD36]
Length = 978
Score = 316 bits (809), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 185/463 (39%), Positives = 256/463 (55%), Gaps = 91/463 (19%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE---------YQIP----EFDNLYLDMNGIIHNCSHP 46
MGVP FR++S +YP +S VV E Y+ P E DNLYLDMNGI+H CSHP
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEEEDHEIGGAKYENPNPNGETDNLYLDMNGIVHPCSHP 60
Query: 47 NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 106
P TE ++F DIF Y + + M +P+K+ +A+DGVAPRAKMNQQR RRFR+AK
Sbjct: 61 EHKKPP--ETEDEMFLDIFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFRAAK 118
Query: 107 EAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 166
+AE+ K ++L E K + RG
Sbjct: 119 DAEL-------KAKQLEIE---------------------------VKERELRG------ 138
Query: 167 KEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTL 226
E++ K K K++DSN ITPGTPFM RL + LRY+V K+++D
Sbjct: 139 ---EIINDAIKGK-------KQWDSNAITPGTPFMDRLAEALRYWVAYKLSSDP------ 182
Query: 227 SLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCT 286
W ++ VI+S PGEGEHK+M +IR +S P Y+PN +HC+YGLDADLI LGL T
Sbjct: 183 ---GWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYDPNTKHCIYGLDADLIFLGLAT 239
Query: 287 HEPYFSLLREEV------KFNTK-----SNKGGSQIVTPEETK-FFLLHLSLMRDYLELE 334
HEP+F +LRE+V KF K +N +V ++ K F LH++++R+YL++E
Sbjct: 240 HEPHFRVLREDVFATQDKKFTIKDQIAEANSNDGDVVAKDDRKPFLWLHVNVLREYLQVE 299
Query: 335 FGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLP 394
+ +SFPF +E IDDWV + F GNDF+P+LP L + + + L + ++ LP
Sbjct: 300 LFTPR----MSFPFELERAIDDWVFLCFFAGNDFLPHLPSLDVRDNGIDTLVQCWKRSLP 355
Query: 395 TLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
L Y+ G LNLK E ++ LA + E F+ K+A Q E
Sbjct: 356 ILKDYVTCDGKLNLKSVEVLMSNLAYKESEIFKNKHAAEQRRE 398
Score = 157 bits (397), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 99/144 (68%), Gaps = 3/144 (2%)
Query: 527 RDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHL---NLKYEMGEPFL 583
RD Y+ I W YYY GC SW+WY+P+HYAP+ +D + L +K+++GEPF
Sbjct: 571 RDVVRHYVEGIAWVALYYYQGCPSWNWYFPYHYAPFAADFTNLEELFPEGVKFKLGEPFR 630
Query: 584 PFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFI 643
PF+QL++VLPAAS LP+ +++LM+ +S I+++YPEEF D+NGKK W+ + L+PFI
Sbjct: 631 PFEQLMSVLPAASGHTLPQVFRDLMSNPDSEIIDFYPEEFEIDMNGKKMSWQGIPLLPFI 690
Query: 644 DEVKLIKAMDAVEHLLTDEERSRN 667
DE +L+ A+ LLT +E SRN
Sbjct: 691 DEKRLLDAVQKKYELLTPDEISRN 714
>gi|167539832|ref|XP_001741374.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165894075|gb|EDR22159.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 779
Score = 314 bits (804), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 205/582 (35%), Positives = 311/582 (53%), Gaps = 80/582 (13%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+KL ++AIDGVAPRAKMNQQR RRF++A +E ++ E+ + + EK DSNCITPG
Sbjct: 88 PRKLLYIAIDGVAPRAKMNQQRSRRFKTAYN---MENQSFEEKKSIFKEKPVDSNCITPG 144
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM + + ++ ++K ++ + K W + VI S PGEGEHKI+D+IR
Sbjct: 145 TEFMEAVSKVIKAYIKERMNSSKYWNS---------IIVIFSDSSVPGEGEHKIIDFIRR 195
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIV----- 312
K +YNP +RHC+YGLDADLIML L THE YFS++R++ NKG +
Sbjct: 196 QKDCKNYNPYIRHCMYGLDADLIMLALATHERYFSIIRDK-----PYNKGDKCYICGDYH 250
Query: 313 TPEETK--------------FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
+P+ K F + ++R YL K V + F E +DD++
Sbjct: 251 SPDHCKNYNRIAPLDPITKPFIFVDCHVLRQYLN------KTIKVEKYDF--ERCLDDFI 302
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
FL+GNDF+P +P L I GA+ +L K+Y + LP +GYI E G +N+K +KFL +
Sbjct: 303 FFCFLVGNDFLPRIPSLDIQEGAIDILIKIYLKFLPE-NGYITENGTINIKIVKKFLHLV 361
Query: 419 ASFDFE-----QFREKYADIQYLEGKMGK---KFSDVFHKEKSKEMDPDLAALIKATDDD 470
+ + + R++ D Y + +M + + F E E P IK
Sbjct: 362 GKEEKQLLVNRRLRKEKEDQIYFDKRMRELDYQIQSAF--ENRTEALPQRKTEIKVK--- 416
Query: 471 YDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTD------------YYHYK--L 516
+EV A E + E+ + F + + K D YY K +
Sbjct: 417 ---SIKEV-QLAKEESQLIKESLEKKKQELFHQIEELKNDEIQLGEPGYEERYYQQKFHV 472
Query: 517 DYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF--SHLNL 574
+Y K + V+ + E Y+ + W YYY GC SW WYYP++YAP+ DI +
Sbjct: 473 EYKKEKSLVI-EIIESYVEGLNWVFSYYYEGCQSWDWYYPYYYAPFAKDIGKLLDPEFEV 531
Query: 575 KYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDW 634
+Y G+PF PF+QLL+VLP SK LP+ ++ LM +SP+ +YPEEF D+NG++ +
Sbjct: 532 QYTQGKPFRPFEQLLSVLPPQSKHCLPKEFRQLMNSTSSPLSNFYPEEFKIDMNGERSFY 591
Query: 635 EAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN-RHGPMLVY 675
+A+ LI FI++ KL+ ++ +E L +++ RN R+G ++
Sbjct: 592 KAIALIGFINQKKLLSVVEPIEKDLGKKDQQRNSRYGNAFIF 633
Score = 94.7 bits (234), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 74/123 (60%), Gaps = 17/123 (13%)
Query: 1 MGVPKFFRYISERYPCLS-EVVREYQIP------------EFDNLYLDMNGIIHNCSHPN 47
MGVP FF +++++Y ++ + R I E+DN Y+D+NG+IH C HP
Sbjct: 1 MGVPSFFAWLTKKYFGITNDCKRGSSIENDDLSSPNPNGVEYDNFYIDLNGLIHPCYHPT 60
Query: 48 DND-PHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 106
D P T +F + YI+ + +++P+KL ++AIDGVAPRAKMNQQR RRF++A
Sbjct: 61 DRQTPE---TNVDVFVLLTQYIDYMIDIVRPRKLLYIAIDGVAPRAKMNQQRSRRFKTAY 117
Query: 107 EAE 109
E
Sbjct: 118 NME 120
>gi|444315189|ref|XP_004178252.1| hypothetical protein TBLA_0A09480 [Tetrapisispora blattae CBS 6284]
gi|387511291|emb|CCH58733.1| hypothetical protein TBLA_0A09480 [Tetrapisispora blattae CBS 6284]
Length = 1063
Score = 313 bits (801), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 188/495 (37%), Positives = 264/495 (53%), Gaps = 98/495 (19%)
Query: 1 MGVPKFFRYISERYP--------CLSEVVREYQIP----------EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP L +VV +P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVSEILPQVVDGVTLPIDYSAPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP +N P TE ++ +F Y + M +P+K+ +A+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHP-ENKPAPE-TEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A + E +A+E A +N++
Sbjct: 119 RSARDASI-ENQARE-----------------------------------AILNERE--- 139
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
K E+++ E L ++K +DSN ITPGTPFM +L LRY++ K+ TD
Sbjct: 140 ----KIGEIID-------ESLKSKKTWDSNAITPGTPFMDKLAAALRYWISFKLATD--- 185
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK++ VI+S PGEGEHKIM+++R + P+YNPN HC+YGLDADLI L
Sbjct: 186 ------LGWKNLQVIISDATVPGEGEHKIMNFVRAQRGDPEYNPNTTHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEV--KFNTKSNKGGSQIVTPEETK-----------FFLLHLSLMRD 329
GL THEP+F +LRE+V + N K +K + EE K F LHLS++R+
Sbjct: 240 GLATHEPHFKILREDVFAQDNRKKHKLKDTMNMTEEEKQLISKQDSEKPFLWLHLSVLRE 299
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YL E + P FPF +E IDDWV M F GNDF+P+LP L + ++ +L ++
Sbjct: 300 YLSAELFVPRLP----FPFDLERAIDDWVFMCFFCGNDFLPHLPSLDVRENSIDILLDIW 355
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFH 449
+ +LP L Y+ G L+LK E L ++ S + + FR K+ IQ + K + ++
Sbjct: 356 KTLLPQLKTYMTCDGRLDLKAVELLLQQVGSRESDIFRTKH--IQQVRKKESLQRKNIRK 413
Query: 450 KEKSKEMDPDLAALI 464
E+ D D LI
Sbjct: 414 SERRTAKDQDKQPLI 428
Score = 170 bits (431), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 113/178 (63%), Gaps = 2/178 (1%)
Query: 507 HKTDYYHYKLDYAKVTNEVLR-DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISD 565
+K YY K E LR D + YI + W L YYY GC SW W+YP+HYAP SD
Sbjct: 626 YKERYYVNKFHIKSDEIEALRKDMVKSYIEGVAWVLLYYYQGCASWEWFYPYHYAPLPSD 685
Query: 566 IKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFAT 625
FS++N+++ EPFLPF+QL++VLPAAS LP ++ LM+ +S I+++YPEEF
Sbjct: 686 FYGFSNMNVEFGESEPFLPFEQLMSVLPAASGHTLPAIFRPLMSSPDSEIIDFYPEEFPI 745
Query: 626 DLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN-RHGPMLVYTYSNVNL 682
D+NGKK W + L+PFID +L+K + LTD ERSRN R+ P+L+ + NV+
Sbjct: 746 DMNGKKMAWHGIALLPFIDATRLLKVVRDQYPKLTDAERSRNVRNKPILLISNKNVHF 803
>gi|448107650|ref|XP_004205418.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|448110652|ref|XP_004201682.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|359382473|emb|CCE81310.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|359383238|emb|CCE80545.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
Length = 993
Score = 312 bits (800), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 186/457 (40%), Positives = 254/457 (55%), Gaps = 92/457 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE----------YQIP----EFDNLYLDMNGIIHNCSH 45
MGVP FR++S +YP +S V+ + Y P E DNLYLDMNGI+H CSH
Sbjct: 1 MGVPALFRWLSRKYPKIISPVIEDELDEEYGGSRYTDPNPNGEIDNLYLDMNGIVHPCSH 60
Query: 46 PNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 105
P P TE ++F D+F Y + + M +P+K+ +A+DGVAPRAKMNQQR RRFRSA
Sbjct: 61 PEHKPPP--ETEDEMFLDVFKYTDRVLMMARPRKVLVIAVDGVAPRAKMNQQRSRRFRSA 118
Query: 106 KEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRS 165
++A++ A E+ ER E+ RG
Sbjct: 119 QDAKI----AHEEKERQINEREL------------------------------RG----- 139
Query: 166 AKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
E++++ K K K +DSN ITPGTPFM RL LRY+V K++T+
Sbjct: 140 ----EMIDEAIKGK-------KSWDSNAITPGTPFMDRLALALRYWVAYKLSTEP----- 183
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
W ++ VI+S PGEGEHK+M +IR +S P+YNPN HC+YGLDADLI LGL
Sbjct: 184 ----GWANLQVIISDATVPGEGEHKLMSFIRSQRSDPEYNPNTSHCIYGLDADLIFLGLA 239
Query: 286 THEPYFSLLREEVKFN-TKSNKGGSQIVTPEETK-----------FFLLHLSLMRDYLEL 333
THEP+F +LRE+V N ++ + Q+ E+ K F LHL+++R+YLE+
Sbjct: 240 THEPHFRVLREDVFANQSRQLRVSDQLSMSEDQKDALKKKEERKPFLWLHLNVLREYLEI 299
Query: 334 EFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVL 393
E L P +SFPF +E IDDWV + F GNDF+P+LP L + + + L + ++ +L
Sbjct: 300 E---LYNP-YISFPFDLERAIDDWVFICFFAGNDFLPHLPSLDVRDNGIDNLVRCWKRIL 355
Query: 394 PTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
P L YI G LNL+ EK L LAS + E FR K+
Sbjct: 356 PKLSDYITCDGNLNLESVEKLLEGLASKEDEIFRRKH 392
Score = 158 bits (399), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 102/149 (68%), Gaps = 4/149 (2%)
Query: 523 NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHL----NLKYEM 578
++V +D + Y+ I W L YYY GC SW WYYP+HYAP+ +D K+ + + +++
Sbjct: 565 DKVRKDMVKHYLEGISWVLLYYYQGCPSWQWYYPYHYAPFAADFKNIREIVGEEGITFKL 624
Query: 579 GEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVV 638
G+PF P++QL++VLPAAS LPE ++ LM+ S I+++YPEEF D+NGKK W+ +
Sbjct: 625 GQPFRPYEQLMSVLPAASGHNLPEVFRKLMSDPESEIIDFYPEEFEIDMNGKKMSWQGIA 684
Query: 639 LIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
L+PFIDE +L++A+ LLT+ E+ RN
Sbjct: 685 LLPFIDEKRLLEAVQKKYELLTEAEKERN 713
>gi|294657829|ref|XP_460123.2| DEHA2E18898p [Debaryomyces hansenii CBS767]
gi|218512153|sp|Q6BNU7.4|XRN2_DEBHA RecName: Full=5'-3' exoribonuclease 2
gi|199432980|emb|CAG88393.2| DEHA2E18898p [Debaryomyces hansenii CBS767]
Length = 1003
Score = 311 bits (798), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/457 (38%), Positives = 250/457 (54%), Gaps = 92/457 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIP---------------EFDNLYLDMNGIIHNCSH 45
MGVP FR++S +YP + V E + E DNLYLDMNGI+H CSH
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEDDVTQEIGAAQFSDPNPNGELDNLYLDMNGIVHPCSH 60
Query: 46 PNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 105
P P TE ++F D+F Y + + M +P+K+ +A+DGVAPRAKMNQQR RRFRSA
Sbjct: 61 PEHKLPP--ETEDEMFLDVFKYTDRVLLMARPRKVLMIAVDGVAPRAKMNQQRSRRFRSA 118
Query: 106 KEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRS 165
++A++ A E+ ER E+
Sbjct: 119 QDAKI----AHEEKERQIRER--------------------------------------- 135
Query: 166 AKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
E + + + + +K +DSN ITPGTPFM L Q LRY+V K+ TD
Sbjct: 136 -------ESRGESIDDAIKGKKSWDSNAITPGTPFMDSLAQALRYWVAYKLATDP----- 183
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
W ++ VI+S PGEGEHK+M +IR +S P+Y+PN +HC+YGLDADLI LGL
Sbjct: 184 ----GWANLQVIISDATVPGEGEHKLMSFIRSQRSDPEYDPNTKHCIYGLDADLIFLGLA 239
Query: 286 THEPYFSLLREEVKFN-TKSNKGGSQIVTPEETK-----------FFLLHLSLMRDYLEL 333
THEP+F +LRE+V N ++ + Q+ ++ K F LH++++R+YLE+
Sbjct: 240 THEPHFRVLREDVFANQSRQMRISDQLSMTQDQKDSIAEQDAKKPFLWLHVNVLREYLEI 299
Query: 334 EFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVL 393
E L P LSFPF +E IDDWV M F +GNDF+P+LP L + + + +L ++ +L
Sbjct: 300 E---LYNPH-LSFPFDLERAIDDWVFMCFFVGNDFLPHLPSLDVRDNGIDILVNCWKRML 355
Query: 394 PTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
P L YI G LNL+ EK L+ L+ + E FR+++
Sbjct: 356 PKLRDYITCDGNLNLESVEKLLSSLSYKEDEIFRKRH 392
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 105/149 (70%), Gaps = 4/149 (2%)
Query: 523 NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHL----NLKYEM 578
N++ RD CY+ I W L YYY GC SW WYYP+HYAP+ +D + + + +K+ +
Sbjct: 564 NKIRRDMVRCYLEGISWVLLYYYQGCPSWQWYYPYHYAPFAADFVNINDIIGEQGIKFTL 623
Query: 579 GEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVV 638
GEPF P++QL++VLPAAS LPE + LM+ +S IL++YPEEF D+NGKK W+ +
Sbjct: 624 GEPFKPYEQLMSVLPAASGHNLPEVLRILMSDPSSEILDFYPEEFQIDMNGKKMSWQGIA 683
Query: 639 LIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
L+PFIDE +L++A++ HLLTD+ER RN
Sbjct: 684 LLPFIDENRLLEALEKRYHLLTDDERERN 712
>gi|403367227|gb|EJY83428.1| 5'-3' exonuclease [Oxytricha trifallax]
Length = 1484
Score = 311 bits (796), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/431 (40%), Positives = 243/431 (56%), Gaps = 72/431 (16%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MG+PKFFR+++ RYP L V +E P DNLYLD+NGI+HNC H ND H ++++ +
Sbjct: 1 MGIPKFFRWLTRRYPLILQNVQKEEDCPPIDNLYLDLNGIVHNCIHGNDPSKHEKVSKME 60
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
F ++ ++ I+ AID + K
Sbjct: 61 DFDEV--WVSIM-----------RAIDEIVHSVK-------------------------- 81
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 179
PKKL F+A+DGVAPRAKMNQQR RRFRSAKEA ++ +++
Sbjct: 82 ------------------PKKLLFLAVDGVAPRAKMNQQRARRFRSAKEAFESREQLRQE 123
Query: 180 GERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILS 239
G+ P + FD+N I+PGT FM L +QL +FV+ K D L+++ VI+S
Sbjct: 124 GKEAP--ELFDTNAISPGTQFMFELCKQLHFFVQYKTNVDPLYQNLAQ--------VIVS 173
Query: 240 GHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK 299
PGEGEHK+MD+IR K P Y+PN RHC YG DADLIML L THEP+F ++REE
Sbjct: 174 DGSIPGEGEHKMMDFIRQAKQSPQYDPNTRHCFYGADADLIMLSLLTHEPHFIIIREEHI 233
Query: 300 FNTKSNKGGSQ-IVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
F KS +GG Q I ++ F +++++L+R+Y ELE+ L+ + F +E IIDD+V
Sbjct: 234 FK-KSKQGGVQRIDKKKQVNFQIVYINLLREYFELEYKPLQSQ--MKIQFDLERIIDDFV 290
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
F IGNDF+P+L L I G+L L K+Y+++LP +D YI E G + R + F+ L
Sbjct: 291 FFCFFIGNDFLPSLSALDISEGSLDQLIKLYRKLLPQMDNYITESGTIYWDRAQPFIKML 350
Query: 419 ASFDFEQFREK 429
+ E F E+
Sbjct: 351 GEHEHESFIER 361
Score = 95.1 bits (235), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 67/124 (54%), Gaps = 30/124 (24%)
Query: 547 GCVSWSWYYPHHYAPYISDIK---------------DF------SHLNLKYEMGEPFLPF 585
G W WYYP+HYAP ISDI DF SH+N EP+ PF
Sbjct: 573 GAQHWRWYYPYHYAPMISDIDEDIVENYLKGSKVIGDFEIDENCSHIN------EPYRPF 626
Query: 586 QQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDE 645
QLL +LPA S +LLP+ Y ++ + +Y+P++F DLNG+ WEAV LIPF++E
Sbjct: 627 FQLLCILPAKSVKLLPQQYSEIIL---GVLRKYFPDDFTIDLNGRSLPWEAVCLIPFVEE 683
Query: 646 VKLI 649
I
Sbjct: 684 SLFI 687
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 157/380 (41%), Gaps = 68/380 (17%)
Query: 905 KTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPD----------- 953
K+I E PG + L+ G G V+ + N+ +K+ F + E
Sbjct: 953 KSIIESINPGQEVICLNQHMLGIMGRVVHLDFKRNA-VKVEFDKESEQSKLHDPFIGQVC 1011
Query: 954 LSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFII--DSTEEGAKRHNIGLNI 1011
L D ++ D + + + KL + P +++R T S + D +E + +IGLNI
Sbjct: 1012 LKDENFVKKDQIKRFYNEKQIEEKLKLKPGVINRITSSFLLSYHDPNKEDRQVIDIGLNI 1071
Query: 1012 KFSRKNEEVVGFTR------------------------RDETTKK----WFYTEQVVTLI 1043
K K + + R ++ KK W ++++ V ++
Sbjct: 1072 KNYTKKVHIPSYVRYVILENDKYRENDQKYQLMDSNIYSNQPEKKHRRYWEFSQECVNIL 1131
Query: 1044 KNYMKQFPEVFGFLKDHSSDD--IYLRDDVFPH----QGEQRVAQIVSWLKEQPHAKAEV 1097
++Y ++PE+F + + S D + + FP + + V+ I W+ P +K
Sbjct: 1132 QDYKNKYPEIFELIYESISQDKQVLPIKECFPQMKLKEATEYVSGIAKWIVSLPTSKLPY 1191
Query: 1098 RPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLYIPKPTL---------DKLCP 1148
G + ++ I+ + ++ KQI + K + Y+P L + P
Sbjct: 1192 VEIGYDALHQNLIQRIQSYQEVLKQDGKQIKIKCKKFE-YLPVSMLLFENFPIYTNHFSP 1250
Query: 1149 DPDTKFKLFDRVVNIRDCYT--VPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI- 1205
F + DRV+NI VP G+RGT++ G+TS + V+FD+ + G I
Sbjct: 1251 KEVNDFNIGDRVMNINSTLREYVPFGHRGTVV----GKTSDKLI--VLFDQQYLGGDNIN 1304
Query: 1206 -RCSESRGYRMPAQAMINLS 1224
+ + RG ++ ++NL+
Sbjct: 1305 GQSQDFRGGKVGPNDLLNLT 1324
>gi|9759012|dbj|BAB09325.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 746
Score = 311 bits (796), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 208/633 (32%), Positives = 322/633 (50%), Gaps = 114/633 (18%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK------ 179
FD+I F P+KL FMAIDGVAPRAKMNQQR RRFR+AK+A + ++
Sbjct: 84 FDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARRFRAAKDAAEAAAEEEQLREEFER 143
Query: 180 -GERLP---TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
G++LP + FDSN ITPGT FM L LRY++ +++ +D WK++
Sbjct: 144 EGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYIHVRLNSDP---------GWKNIK 194
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR K+ P YNPN HCLYGLDADLIML L THE +FS+LR
Sbjct: 195 VILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIMLSLATHEIHFSILR 254
Query: 296 E-------------------------EVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDY 330
E ++K T ++ + + +++ ++R+Y
Sbjct: 255 EVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVVKKPYEFVNIWILREY 314
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE + ++ PG +++ +IDD++ + F +GNDF+P++P L I GA+ LL VY+
Sbjct: 315 LEHD---MQIPGAKK---NLDRLIDDFIFICFFVGNDFLPHMPTLEIREGAIELLMSVYK 368
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVF-- 448
+ Y+ + LNL+ E+F+ + ++ + F+++ ++ K K D
Sbjct: 369 NKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRRQSERFRRDKARDKARDNARD 428
Query: 449 HKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHK 508
+ + S++ L L D D+ ++ + + + + S +D N +E K
Sbjct: 429 NAQASRQFSGKLVQL-----DSLDEVSDSLHSSPSRKYLRLSLDDNIGVANVETE-NSLK 482
Query: 509 TDYYHYKLDYAKVTNE---------VLRDQAECY-----------IRAIQWNLHYY---- 544
+ + ++ NE +LRD+ + + + + W YY
Sbjct: 483 AECTKVHSGFQELDNEEDLKFKLKKLLRDKGDGFRSGNGEQDKVKLNKVGWRERYYEEKF 542
Query: 545 ------------------YNGCVSWSWYYPHH------------YAPYISDIKDFSHLNL 574
Y + W +Y +H YAP+ SD+K L++
Sbjct: 543 AAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLDI 602
Query: 575 KYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDW 634
K+E+G PF PF QLLAVLP+AS LPE Y++LMT +SPI ++YP +F D+NGK+ W
Sbjct: 603 KFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRYSW 662
Query: 635 EAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
+ + +PF++E +L++A VE LT+EE RN
Sbjct: 663 QGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRN 695
Score = 120 bits (300), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 78/124 (62%), Gaps = 23/124 (18%)
Query: 1 MGVPKFFRYISERYPC-LSEVVRE---------YQIP-----------EFDNLYLDMNGI 39
MGVP F+R++ +RYP + EV+ E IP E+DNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 40 IHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
IH C HP D TE +FQ +F YI+ LF M++P+KL FMAIDGVAPRAKMNQQR
Sbjct: 61 IHPCFHPEDKPSPTTFTE--VFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRA 118
Query: 100 RRFR 103
RRFR
Sbjct: 119 RRFR 122
>gi|67466694|ref|XP_649490.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56465942|gb|EAL44104.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 779
Score = 310 bits (795), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 200/577 (34%), Positives = 310/577 (53%), Gaps = 70/577 (12%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+KL ++AIDGVAPRAKMNQQR RRF++A+ ++ Q +EK + + EK DSNCITPG
Sbjct: 88 PRKLLYIAIDGVAPRAKMNQQRSRRFKTAQN--MVNQSFEEK-KSVFKEKPIDSNCITPG 144
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM + + ++ ++K ++ + K W + VI S PGEGEHKI+D+IR
Sbjct: 145 TEFMEAVSKVIKAYIKERMNSSKYWNS---------IIVIFSDSSVPGEGEHKIIDFIRR 195
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE------------VKFNTKSN 305
K +YNP +RHC+YGLDADLIML L THE YFS++R++ ++ S
Sbjct: 196 QKDCKNYNPYIRHCMYGLDADLIMLALATHERYFSIIRDKPYNKGDKCYICGEYHSSDSC 255
Query: 306 KGGSQI--VTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFL 363
K +++ + P F + ++R YL K + E +DD++ FL
Sbjct: 256 KNYNRVAPLDPITKPFIFVDCHVLRQYLNNTIKVEK--------YDFERCLDDFIFFCFL 307
Query: 364 IGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDF 423
+GNDF+P++P L I GA+ +L K+Y + LP +GYI E G +N K ++FL + +
Sbjct: 308 VGNDFLPHIPSLDIQEGAIDILIKIYLKFLPE-NGYITENGTINFKIVKRFLHLVGKEEK 366
Query: 424 E-----QFREKYADIQYLEGKMGK---KFSDVFHKEKSKEMDPDLAALIKATDDDYDDGT 475
+ + R++ D Y + KM + + F E E P IK
Sbjct: 367 QLLVNRRLRKEKEDQLYFDKKMRELDYQIQSAF--ENRTEALPQRKTEIKVK------SI 418
Query: 476 EEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTD------------YYHYK--LDYAKV 521
+EV A E + E+ + + + K D YY K +DY K
Sbjct: 419 KEV-ELAKEESQLIRESLEKKKQEVVRQMEELKHDEIQLGEQGYEERYYQQKFHVDYKKE 477
Query: 522 TNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF--SHLNLKYEMG 579
N ++ + + Y+ + W YYY GC SW WYYP++YAP+ DI ++Y G
Sbjct: 478 KNNII-EIVDSYVEGLNWVFSYYYEGCQSWDWYYPYYYAPFAKDIGKLLDPEFEVQYTQG 536
Query: 580 EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVL 639
+PF PF+QL++VLP SK LP+ +Q LM +SP+ +YPE+F D+NG++ ++A+ L
Sbjct: 537 KPFRPFEQLMSVLPPQSKHCLPKEFQQLMNSTSSPLSSFYPEDFKIDMNGERSFYKAIAL 596
Query: 640 IPFIDEVKLIKAMDAVEHLLTDEERSRN-RHGPMLVY 675
I FI++ KL+ ++ +E L +++ RN R+G ++
Sbjct: 597 IGFINQKKLLNVVEPIEKELGKKDQQRNSRYGNTFIF 633
Score = 94.4 bits (233), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 73/120 (60%), Gaps = 17/120 (14%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQI-------------PEFDNLYLDMNGIIHNCSHPN 47
MGVP FF +++++Y ++ ++ E+DN Y+D+NG+IH C HP
Sbjct: 1 MGVPSFFAWLTKKYVSITNDCKKNSSIENDDLLSPNPNGVEYDNFYIDLNGLIHPCYHPT 60
Query: 48 DND-PHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 106
D P T +F + YI+ + +++P+KL ++AIDGVAPRAKMNQQR RRF++A+
Sbjct: 61 DRQTPE---TNVDVFVLLTRYIDYMVDIVRPRKLLYIAIDGVAPRAKMNQQRSRRFKTAQ 117
>gi|354547470|emb|CCE44204.1| hypothetical protein CPAR2_400060 [Candida parapsilosis]
Length = 966
Score = 309 bits (791), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 184/457 (40%), Positives = 251/457 (54%), Gaps = 91/457 (19%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE---------YQIP----EFDNLYLDMNGIIHNCSHP 46
MGVP FR++S++YP +S V+ E Y+ P E DNLYLDMNGI+H CSHP
Sbjct: 1 MGVPALFRWLSKKYPKIISPVIEEDEHEIGGAKYEDPNPNGEIDNLYLDMNGIVHPCSHP 60
Query: 47 NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 106
P TE ++F DIF Y + + M +P+K+ +A+DGVAPRAKMNQQR RRFRSA+
Sbjct: 61 EHKRPP--ETEDEMFLDIFTYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFRSAQ 118
Query: 107 EAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 166
+A+ + MAID
Sbjct: 119 DAKFKQ-------------------------------MAID------------------- 128
Query: 167 KEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTL 226
KE E + + + + +K++DSN ITPGTPFM RL + LRY+V K++TD
Sbjct: 129 KEIREKEARGEMINDAIKGKKQWDSNAITPGTPFMDRLAEALRYWVAYKLSTDP------ 182
Query: 227 SLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCT 286
W ++ VI+S PGEGEHK+M +IR +S P YNPN +HC+YGLDADLI LGL T
Sbjct: 183 ---GWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYNPNTKHCIYGLDADLIFLGLAT 239
Query: 287 HEPYFSLLREEVKFN-----TKSNKGG---SQIVTPEETK----FFLLHLSLMRDYLELE 334
HEP+F +LRE+V N T S+ G Q+ EE F LH++++R+YL +E
Sbjct: 240 HEPHFRVLREDVFANQQRHMTVSDHVGMSKDQLSLIEERDKKKPFLWLHVNVLREYLAIE 299
Query: 335 FGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLP 394
L P + SFPF +E IDDWV + F GNDF+P+LP L + + + L +++ LP
Sbjct: 300 ---LYNPQI-SFPFDLERAIDDWVFICFFAGNDFLPHLPSLDVRDNGIDTLVGCWKKCLP 355
Query: 395 TLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYA 431
L Y+ G LNL+ E L LA + E FR ++A
Sbjct: 356 RLRDYLTCDGKLNLQSVEVLLGDLAIKEDEIFRNRFA 392
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 104/159 (65%), Gaps = 5/159 (3%)
Query: 512 YHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSH 571
+H K D + +V R+ + YI I W YYY GC SW+W+YP+HYAP+ SD+ +
Sbjct: 554 FHCKTD--EEVEQVRRNVVKSYIEGISWVALYYYQGCPSWTWFYPYHYAPFASDMTNLDE 611
Query: 572 L---NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLN 628
L +K+++GEPF P++QL++VLPAAS LPE + LM +S I+E+YPEEF D+N
Sbjct: 612 LFPDGIKFDLGEPFRPYEQLMSVLPAASSHALPEVFHALMKDPDSEIIEFYPEEFEIDMN 671
Query: 629 GKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
GKK W+ + L+PFIDE +L+ A+ LT+ E+ RN
Sbjct: 672 GKKMSWQGIPLLPFIDEKRLLDAVQGKYEELTEYEKERN 710
>gi|254579256|ref|XP_002495614.1| ZYRO0B15642p [Zygosaccharomyces rouxii]
gi|238938504|emb|CAR26681.1| ZYRO0B15642p [Zygosaccharomyces rouxii]
Length = 1012
Score = 309 bits (791), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 180/461 (39%), Positives = 249/461 (54%), Gaps = 96/461 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------------YQIP----EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP +S V+ E Y P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVIEEQPQVVDGVTLPIDYTAPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +F Y + M +P+K+ +A+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENKPPP--ETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSAK+A++ E ER+ E+ +Q G
Sbjct: 119 RSAKDAQI----ENENRERIMQER------------------------------EQLG-- 142
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
E+++ K T+K +DSN ITPGTPFM +L LRY+ K+ TD
Sbjct: 143 -------EIIDGAVK-------TKKTWDSNAITPGTPFMDKLAAALRYWCSFKLATDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK++ VI+S PGEGEHKIM+++R ++ YNPN HC+YGLDADLI L
Sbjct: 187 -------GWKNLQVIISDATVPGEGEHKIMNFVRSQRADAQYNPNTTHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEV--KFNTKSNKGGSQIVTPEETK-----------FFLLHLSLMRD 329
GL THEP+F +LRE+V + N K + + EE K F LH+S++R+
Sbjct: 240 GLATHEPHFKVLREDVFAQGNNKRHNLKDSLNMSEEEKQMIAKQDSEKPFLWLHISVLRE 299
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YL E + P FPF +E IDDWV M F GNDF+P+LP L + ++ +L ++
Sbjct: 300 YLSAELWVPRMP----FPFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDILLDIW 355
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+ VLPT+ YI G LNL+ EK L++L S + + F+ ++
Sbjct: 356 KVVLPTMKTYITCDGELNLESVEKLLSQLGSREADIFKTRH 396
Score = 166 bits (421), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 117/181 (64%), Gaps = 3/181 (1%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLR-DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAP 561
E G H+ YY K + + LR D +CYI + W L YYY GC SW+WYYP+HYAP
Sbjct: 613 EPGYHER-YYTEKFHISPNHIDALRKDLVKCYIEGVSWVLLYYYQGCASWTWYYPYHYAP 671
Query: 562 YISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
+D FS + +++ G+PFLP++QL++VLPAAS LP ++ LM+ +S I+++YP
Sbjct: 672 LAADFFGFSDIKVEFPPGKPFLPYEQLMSVLPAASGHTLPPIFRPLMSSPDSEIIDFYPT 731
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN-RHGPMLVYTYSNV 680
EF D+NGKK W+ + L+PFIDE +L++ + A LT+EE+SRN P+L+ + N
Sbjct: 732 EFPVDMNGKKMPWQGIALLPFIDEKRLLQVVRAQYSKLTEEEKSRNVVRNPILLISNKNA 791
Query: 681 N 681
N
Sbjct: 792 N 792
>gi|449708316|gb|EMD47799.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 779
Score = 308 bits (790), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 199/577 (34%), Positives = 310/577 (53%), Gaps = 70/577 (12%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+KL ++AIDGVAPRAKMNQQR RRF++A+ ++ Q +EK + + EK DSNCITPG
Sbjct: 88 PRKLLYIAIDGVAPRAKMNQQRSRRFKTAQN--MVNQSFEEK-KSVFKEKPIDSNCITPG 144
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM + + ++ ++K ++ + K W + VI S PGEGEHKI+D+IR
Sbjct: 145 TEFMEAVSKVIKAYIKERMNSSKYWNS---------IIVIFSDSSVPGEGEHKIIDFIRR 195
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE------------VKFNTKSN 305
K +YNP +RHC+YGLDADLIML L THE YFS++R++ ++ S
Sbjct: 196 QKDCKNYNPYIRHCMYGLDADLIMLALATHERYFSIIRDKPYNKGDKCYICGEYHSSDSC 255
Query: 306 KGGSQI--VTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFL 363
K +++ + P F + ++R YL K + E +DD++ FL
Sbjct: 256 KNYNRVAPLDPITKPFIFVDCHVLRQYLNNTIKVEK--------YDFERCLDDFIFFCFL 307
Query: 364 IGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDF 423
+GNDF+P++P L I GA+ +L K+Y + LP +GYI E G +N K ++FL + +
Sbjct: 308 VGNDFLPHIPSLDIQEGAIDILIKIYLKFLPE-NGYITENGTINFKIVKRFLHLVGKEEK 366
Query: 424 E-----QFREKYADIQYLEGKMGK---KFSDVFHKEKSKEMDPDLAALIKATDDDYDDGT 475
+ + R++ D Y + KM + + F E E P IK
Sbjct: 367 QLLVNRRLRKEKEDQLYFDKKMRELDYQIQSAF--ENRTEALPQRKTEIKVK------SI 418
Query: 476 EEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTD------------YYHYK--LDYAKV 521
+EV A E + E+ + + + K D YY K +DY K
Sbjct: 419 KEV-ELAKEESQLIRESLEKKKQEVVRQMEELKHDEIQLGEQGYEERYYQQKFHVDYKKE 477
Query: 522 TNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF--SHLNLKYEMG 579
N ++ + + Y+ + W YYY GC SW WYYP++YAP+ DI +++ G
Sbjct: 478 KNNII-EIVDSYVEGLNWVFSYYYEGCQSWDWYYPYYYAPFAKDIGKLLDPEFEVQHTQG 536
Query: 580 EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVL 639
+PF PF+QL++VLP SK LP+ +Q LM +SP+ +YPE+F D+NG++ ++A+ L
Sbjct: 537 KPFRPFEQLMSVLPPQSKHCLPKEFQQLMNSTSSPLSSFYPEDFKIDMNGERSFYKAIAL 596
Query: 640 IPFIDEVKLIKAMDAVEHLLTDEERSRN-RHGPMLVY 675
I FI++ KL+ ++ +E L +++ RN R+G ++
Sbjct: 597 IGFINQKKLLNVVEPIEKELGKKDQQRNSRYGNTFIF 633
Score = 94.4 bits (233), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 73/120 (60%), Gaps = 17/120 (14%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQI-------------PEFDNLYLDMNGIIHNCSHPN 47
MGVP FF +++++Y ++ ++ E+DN Y+D+NG+IH C HP
Sbjct: 1 MGVPSFFAWLTKKYVSITNDCKKNSSIENDDLLSPNPNGVEYDNFYIDLNGLIHPCYHPT 60
Query: 48 DND-PHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 106
D P T +F + YI+ + +++P+KL ++AIDGVAPRAKMNQQR RRF++A+
Sbjct: 61 DRQTPE---TNVDVFVLLTRYIDYMVDIVRPRKLLYIAIDGVAPRAKMNQQRSRRFKTAQ 117
>gi|365987598|ref|XP_003670630.1| hypothetical protein NDAI_0F00680 [Naumovozyma dairenensis CBS 421]
gi|343769401|emb|CCD25387.1| hypothetical protein NDAI_0F00680 [Naumovozyma dairenensis CBS 421]
Length = 1034
Score = 308 bits (789), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 182/466 (39%), Positives = 246/466 (52%), Gaps = 105/466 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------------YQIP----EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP +S V+ E Y +P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDNVKLPLDYSLPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +F Y + M +P+K+ MA+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENKPPPE--TEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A++ E +A+E
Sbjct: 119 RSARDAQI-ENEARE--------------------------------------------- 132
Query: 163 FRSAKEAEVLEQKAKEKGERL----PTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITT 218
E+L QK +E GE + +K +DSN ITPGTPFM +L LRY+ K+ T
Sbjct: 133 -------EILRQK-EEIGEMIDDAVKNKKTWDSNAITPGTPFMDKLAAALRYWTAFKLAT 184
Query: 219 DKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDAD 278
D WK + VI+S PGEGEHKIM++IR ++ P+YNPN HC+YGLDAD
Sbjct: 185 DP---------GWKSLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDAD 235
Query: 279 LIMLGLCTHEPYFSLLREEVKFNTKSNKGGS---QIVTPEETK-----------FFLLHL 324
LI LGL THEP+F +LRE+V +G + I EE K F LH+
Sbjct: 236 LIFLGLATHEPHFKILREDVFAQDNRRRGNTLADSINMSEEEKRLIQEQDAQKPFLWLHI 295
Query: 325 SLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPL 384
S +RDYL E + P FPF +E IDDWV M F GNDF+P+LP L + ++ +
Sbjct: 296 STLRDYLSAELWIPRLP----FPFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDI 351
Query: 385 LYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
L +++ VLP L Y+ G LNL+ E L +L S + + F+ ++
Sbjct: 352 LLDIWKVVLPNLKTYMTCDGELNLESVEMLLKQLGSRESDIFKTRH 397
Score = 169 bits (428), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 114/177 (64%), Gaps = 2/177 (1%)
Query: 507 HKTDYYHYKLDYAKVTNEVLR-DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISD 565
++ YY K + E LR + YI + W L YYY GC SW+WYYP+HYAP+ D
Sbjct: 604 YRERYYKAKCYVSDEDIESLRKGMVKSYIEGVSWVLLYYYQGCASWNWYYPYHYAPFAQD 663
Query: 566 IKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFAT 625
+ +++K+E+GEPFLPF+QL++VLPAAS LP ++ LM+ +SPI+++YP EF
Sbjct: 664 FFGITDMDVKFELGEPFLPFEQLMSVLPAASGHTLPSIFRPLMSEPDSPIIDFYPAEFPI 723
Query: 626 DLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN-RHGPMLVYTYSNVN 681
D+NGKK W+ + L+PFIDE +L+K + LTD E+SRN R +L+ + N N
Sbjct: 724 DMNGKKMSWQGISLLPFIDEKRLLKTVREQYPKLTDYEKSRNVRKEAVLLISNKNAN 780
>gi|300121215|emb|CBK21596.2| unnamed protein product [Blastocystis hominis]
Length = 938
Score = 308 bits (789), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 195/554 (35%), Positives = 290/554 (52%), Gaps = 47/554 (8%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+KL F+A+DGVAPRAK+NQQR RR+R+A + + + KGE FDSNCITPG
Sbjct: 77 PRKLMFIAVDGVAPRAKLNQQRSRRYRTALDRCLEVESTGHKGEV------FDSNCITPG 130
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM ++ Q + YF++ KI+ D LW++T+ L+ S H PGEGEHKIM++IRY
Sbjct: 131 TEFMHKVDQLIEYFIRKKISEDPLWRNTMVLY---------SSHSDPGEGEHKIMNFIRY 181
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
+ + PDYN RHC+YGLDADLI+L L H+ LLR + F K + + E
Sbjct: 182 LCTSPDYNAAERHCIYGLDADLILLSLSLHDVNVILLRNIIDFRAYFRKVQTTVNRAEPI 241
Query: 318 -KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSI---ENIIDDWVLMGFLIGNDFIPNLP 373
K+ + H+S++R+YL F L +P S+ S+ E +IDD+V + L+GNDF+P LP
Sbjct: 242 HKWEIFHISVLREYL---FRDL-QPSNASW-MSVKDRERLIDDFVFIMILLGNDFLPELP 296
Query: 374 DLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADI 433
L I+NG++ L +Y+EV ++ + +L +F +L+ + E +
Sbjct: 297 SLDIVNGSIQDLIAIYKEVCLDRHKFLVDDAKPSLSLLRQFFQRLS-----ETEEVMIAL 351
Query: 434 QYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDED 493
+ F+ +P LAA + + +
Sbjct: 352 LHEPAPRPFGFALAMRNRTPIRSEPCLAACPSSNRRRISTRSSATAPPTTANTTISTSSI 411
Query: 494 EEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSW 553
+ K DY L+ + ++V R+ Y + W L YYY G SW+W
Sbjct: 412 SSCLVD------SRKRDY---SLENEVILDDVCRN----YYEGLYWVLLYYYRGVRSWTW 458
Query: 554 YYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENS 613
+Y +HYAP SD+ + +G P PF Q L+ LP S+ +LP Y+ L++ S
Sbjct: 459 FYRYHYAPLPSDLARCDMKYSSFSLGAPVKPFLQQLSCLPPQSQSILPASYRVLVS-AKS 517
Query: 614 PILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDA--VEHLLTDEERSRNR-HG 670
P+ ++YP F+ D+N KK WE V LIPFID +L AM+A V+ LT +E+ RN G
Sbjct: 518 PVADFYPARFSIDMNNKKNPWEGVNLIPFIDIDRLTAAMEALQVDAGLTLDEQKRNAFQG 577
Query: 671 PMLVYTYSNVNLGT 684
P L + YS + G+
Sbjct: 578 PQL-FQYSAKSWGS 590
Score = 117 bits (294), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 80/121 (66%), Gaps = 2/121 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ-IPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MG+PKF+RY+ ERYP +SE+V + +P D LYLD+NGIIHN +H T+
Sbjct: 1 MGIPKFYRYLLERYPLVSEIVTSSEFLPRCDYLYLDVNGIIHNATHGESAIGEIPTTD-M 59
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ +F YI +F IQP+KL F+A+DGVAPRAK+NQQR RR+R+A + + + KG
Sbjct: 60 VASYVFGYISDIFANIQPRKLMFIAVDGVAPRAKLNQQRSRRYRTALDRCLEVESTGHKG 119
Query: 120 E 120
E
Sbjct: 120 E 120
>gi|207345483|gb|EDZ72294.1| YGL173Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1409
Score = 308 bits (788), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 240/804 (29%), Positives = 383/804 (47%), Gaps = 58/804 (7%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
+E E +T + F + K +YYH KL + + E +RD A+ Y+ +QW L+YYY GC S
Sbjct: 376 EELETEKTIYNERFERWKHEYYHDKLKFTTDSEEKVRDLAKDYVEGLQWVLYYYYRGCPS 435
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
WSWYYPHHYAP ISD+ ++++++ +PF PFQQL+AVLP SK L+P ++ LM
Sbjct: 436 WSWYYPHHYAPRISDLVKGLDQDIEFDLSKPFTPFQQLMAVLPERSKNLIPPTFRPLMYD 495
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
E SPI ++YP E D NGK DWEAVVLI F+DE +LI+AM L+ EE++RN+ G
Sbjct: 496 EQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVDEKRLIEAMQPYLCKLSPEEKTRNQFG 555
Query: 671 PMLVYTYSNV--NLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL 728
L+Y+++ N+ + F I NH VEK I + +++R GL + L
Sbjct: 556 KDLIYSFNPQVDNIYKSPLGGIFSDIEHNHCVEKEYIT--IPLDSSEIRYGLLPNAKLGA 613
Query: 729 -YVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQD--KVQVPSLKQVADQILGK 784
+ FPTL + FT +E + VFQQPS+ +S+++ + D K +L+ + + L K
Sbjct: 614 EMLAGFPTLLSLPFTSSLEYNETMVFQQPSKQQSMVLQITDIYKTNNVTLEDFSKRHLNK 673
Query: 785 TIFINYPHLIEIRVQAVATKDSRISF---DKNSGPVFERAAK--DMQDA--FQLSKKSIT 837
I+ +P+L E ++ V+ D + + + N F K + QD F K S+
Sbjct: 674 VIYTRWPYLRESKL--VSLTDGKTIYEYQESNDKKKFRFITKPAETQDKKLFNSLKNSML 731
Query: 838 DGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQ-----RTFIRSTVTYAYQSAV 892
Y + V IG PVE+ F G V +TF + Y Q V
Sbjct: 732 RMYAKQKAVKIG---------PVEAIATVFPVTGLVRDSDGGYIKTFSPTPDYYPLQLVV 782
Query: 893 LNLQQARESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFK-V 948
++ E + + I+E F + L + YG + + I + K +
Sbjct: 783 ESVVNEDERYKERGPIPIEEEFPLNSKVIFLGDYAYGGETTIDGYSSDRRLKITVEKKFL 842
Query: 949 QQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIG 1008
EP + D Y PSY VA + + PL LS+ T I D+T K N+G
Sbjct: 843 DSEPTIGKERLQMDHQAVKYYPSYIVAKNMHLHPLFLSKITSKFMITDAT---GKHINVG 899
Query: 1009 LNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLR 1068
+ +KF ++++V+G+ RR+ + W Y+ + L+K Y + FP+ F F +DI +
Sbjct: 900 IPVKFEARHQKVLGYARRN--PRGWEYSNLTLNLLKEYRQTFPDFF-FRLSKVGNDIPVL 956
Query: 1069 DDVFPHQGEQRVAQIVS----WLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVE 1124
+D+FP + ++ WLK V ++ + ++ +H + +E
Sbjct: 957 EDLFPDTSTKDAMNLLDGIKQWLKYVSSKFIAVSLESDSLTKTSIAAVEDHIMKYAANIE 1016
Query: 1125 ----KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI 1180
KQ+ V + P+ + L KF L DRVV I+D VP+ +GT++G
Sbjct: 1017 GHERKQLAK-VPREAVLNPRSSFALLR---SQKFDLGDRVVYIQDSGKVPIFSKGTVVGY 1072
Query: 1181 VQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPHVK 1238
+S V+FD G R +RG + A ++N++ + +S K
Sbjct: 1073 TTLSSSLSIQ--VLFDHEIVAGNNFGGRLRTNRGLGLDASFLLNIT-NRQFIYHSKASKK 1129
Query: 1239 NINVMQSRGERNTNYAQVTRQPQR 1262
+ + RN N + P +
Sbjct: 1130 ALEKKKQSNNRNNNTKTAHKTPSK 1153
Score = 263 bits (672), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 124/260 (47%), Positives = 179/260 (68%), Gaps = 15/260 (5%)
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
+ +P + FDSN ITPGT FM +L + L+YF+ KI+ D W++V +I SG
Sbjct: 1 DEIPKGEPFDSNSITPGTEFMAKLTKNLQYFIHDKISNDS---------KWREVQIIFSG 51
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HE PGEGEHKIM++IR++KS+ D+N N RHC+YGLDADLIMLGL TH P+F+LLREEV F
Sbjct: 52 HEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLIMLGLSTHGPHFALLREEVTF 111
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
++++ S E F+LLHLSL+R+Y+ELEF ++ + + F ++ E I+DD++L+
Sbjct: 112 GRRNSEKKSL----EHQNFYLLHLSLLREYMELEFKEIADE--MQFEYNFERILDDFILV 165
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F+IGNDF+PNLPDLH+ GA P+L + ++E L DGYINE G +NLKR +L L+
Sbjct: 166 MFVIGNDFLPNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQ 225
Query: 421 FDFEQFREKYADIQYLEGKM 440
F+ F + D+++ ++
Sbjct: 226 FELLNFEKDDIDVEWFNKQL 245
>gi|407036110|gb|EKE38009.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 779
Score = 308 bits (788), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 199/577 (34%), Positives = 310/577 (53%), Gaps = 70/577 (12%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+KL ++AIDGVAPRAKMNQQR RRF++A+ ++ Q +EK + + EK DSNCITPG
Sbjct: 88 PRKLLYIAIDGVAPRAKMNQQRSRRFKTAQS--MVNQSFEEK-KSVFKEKPIDSNCITPG 144
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM + + ++ ++K ++ + K W + VI S PGEGEHKI+D+IR
Sbjct: 145 TEFMEAVSKVIKAYIKERMNSSKYWNS---------IIVIFSDSSVPGEGEHKIIDFIRR 195
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE------------VKFNTKSN 305
K +YNP +RHC+YGLDADLIML L THE YFS++R++ ++ S
Sbjct: 196 QKDCKNYNPYIRHCMYGLDADLIMLALATHERYFSIIRDKPYNKGDKCYICGEYHSSDSC 255
Query: 306 KGGSQI--VTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFL 363
K +++ + P F + ++R YL K + E +DD++ FL
Sbjct: 256 KNYNRVAPLDPITKPFIFVDCHVLRQYLNNTIRVEK--------YDFERCLDDFIFFCFL 307
Query: 364 IGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDF 423
+GNDF+P++P L I GA+ +L K+Y + LP +GYI E G +N K ++FL + +
Sbjct: 308 VGNDFLPHIPSLDIQEGAIDILIKIYLKFLPE-NGYITENGTINFKIVKRFLHLVGKEEK 366
Query: 424 E-----QFREKYADIQYLEGKMGK---KFSDVFHKEKSKEMDPDLAALIKATDDDYDDGT 475
+ + R++ D Y + KM + + F E E P IK
Sbjct: 367 QLLVNRRLRKEKEDQLYFDKKMRELDYQIQSAF--ENRTEALPQRKTEIKVK------SI 418
Query: 476 EEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTD------------YYHYK--LDYAKV 521
+EV A E + E+ + + + K D YY K +DY K
Sbjct: 419 KEV-ELAKEESQLIRESLEKKKQEVVRQMEELKHDEIQLGEQGYEERYYQQKFHVDYKKE 477
Query: 522 TNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF--SHLNLKYEMG 579
N ++ + + Y+ + W YYY GC SW WYYP++YAP+ DI ++Y G
Sbjct: 478 KN-IIIEIVDSYVEGLNWVFSYYYEGCQSWDWYYPYYYAPFAKDIGKLLDPEFEVQYTQG 536
Query: 580 EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVL 639
+PF PF+QL++VLP SK LP+ +Q LM +SP+ +YPE+F D+NG++ ++A+ L
Sbjct: 537 KPFRPFEQLMSVLPPQSKHCLPKEFQQLMNSTSSPLSNFYPEDFKIDMNGERSFYKAIAL 596
Query: 640 IPFIDEVKLIKAMDAVEHLLTDEERSRN-RHGPMLVY 675
I FI++ +L+ ++ +E L +++ RN R+G ++
Sbjct: 597 IGFINQKELLNVVEPIEKELGKKDQQRNSRYGNTFIF 633
Score = 94.7 bits (234), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 74/120 (61%), Gaps = 17/120 (14%)
Query: 1 MGVPKFFRYISERYPCLSEVVR--------EYQIP-----EFDNLYLDMNGIIHNCSHPN 47
MGVP FF +++++Y ++ + + P E+DN Y+D+NG+IH C HP
Sbjct: 1 MGVPSFFAWLTKKYVSITNDCKKGSSIENDDLSSPNPNGVEYDNFYIDLNGLIHPCYHPT 60
Query: 48 DND-PHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 106
D P T +F + YI+ + +++P+KL ++AIDGVAPRAKMNQQR RRF++A+
Sbjct: 61 DRQTPE---TNVDVFVLLTQYIDYMVDIVRPRKLLYIAIDGVAPRAKMNQQRSRRFKTAQ 117
>gi|367010234|ref|XP_003679618.1| hypothetical protein TDEL_0B02780 [Torulaspora delbrueckii]
gi|359747276|emb|CCE90407.1| hypothetical protein TDEL_0B02780 [Torulaspora delbrueckii]
Length = 1030
Score = 306 bits (785), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 177/461 (38%), Positives = 248/461 (53%), Gaps = 96/461 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------------YQIP----EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP +S V+ E Y P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQVVDGVTLPIDYAAPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +F Y + M +P+K+ +A+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENKPPP--ETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRSRRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A+V E +A+E+ R
Sbjct: 119 RSARDAQV-ENEAREQVMR----------------------------------------- 136
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
+ E ++ K K K +DSN ITPGTPFM +L LRY++ K++TD
Sbjct: 137 -EREQVGEFIDDSVKNK-------KTWDSNAITPGTPFMDKLAAALRYWISFKLSTDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK++ VI+S PGEGEHKIM+++R ++ P YNPN HC+YGLDADLI L
Sbjct: 187 -------GWKNLQVIISDATVPGEGEHKIMNFVRSQRADPQYNPNTTHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEV--KFNTKSNKGGSQIVTPEETK-----------FFLLHLSLMRD 329
GL THEP+F +LRE+V + N K + + EE K F LH+S++R+
Sbjct: 240 GLATHEPHFKILREDVFAQNNRKRHNFTDSLNMTEEEKQLIAKQDSEKPFLWLHISVLRE 299
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YL E K LS PF++E IDDWV M F GNDF+P+LP L + ++ +L ++
Sbjct: 300 YLAAELWVPK----LSMPFNLERAIDDWVFMCFFCGNDFLPHLPSLDVRENSIDILLDIW 355
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+ VLP+L Y+ G LNL+ E L +L + + + F+ ++
Sbjct: 356 KVVLPSLKSYMTCDGELNLQSVEMLLGQLGAREGDIFKTRH 396
Score = 159 bits (402), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 111/177 (62%), Gaps = 2/177 (1%)
Query: 507 HKTDYYHYKLDYAKVTNEVLR-DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISD 565
++ YY K + + E LR D Y+ + W L YYY GC SW WYYP+HYAP+ SD
Sbjct: 612 YRERYYVAKFNIKESEIEALRKDLVRRYVEGVSWVLAYYYQGCASWDWYYPYHYAPFASD 671
Query: 566 IKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFAT 625
+ + +++E GEP LP++QL++VLPAAS LP ++ LM+ +S I+++YP EF
Sbjct: 672 FFGIADMKVEFEEGEPILPYEQLMSVLPAASAHTLPSIFKPLMSEPDSEIIDFYPTEFPI 731
Query: 626 DLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR-HGPMLVYTYSNVN 681
D+NGKK W+ + L+PFI+ +L++ + LT+ ERSRN P+L+ + NVN
Sbjct: 732 DMNGKKMSWQGIALLPFIEAKRLLRVVRNQYSRLTEYERSRNVCKEPVLLISNKNVN 788
>gi|66826105|ref|XP_646407.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
gi|60474374|gb|EAL72311.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
Length = 1190
Score = 306 bits (785), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 183/461 (39%), Positives = 259/461 (56%), Gaps = 91/461 (19%)
Query: 1 MGVPKFFRYISERYPCL------------SEVVREYQIP----EFDNLYLDMNGIIHNCS 44
MG+P FFR++ ++Y L V ++ P E+DNLYLDMNGIIH C+
Sbjct: 1 MGIPAFFRWLIDKYGGLIQETTEPREADGGRSVVDFTTPNPNGEYDNLYLDMNGIIHPCA 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
HP + P + E I Q I+ Y+++LF +I+P+KL +MA+DGVAPRAKMNQQR RRFR+
Sbjct: 61 HP-EKGPKPKSIEDMI-QSIYEYLDLLFAIIRPRKLIYMAVDGVAPRAKMNQQRTRRFRA 118
Query: 105 AKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFR 164
A ++ + K+K L E+ + DG+A + +
Sbjct: 119 ALDSRL----DKDKEAALWRERIY------------------DGLATQQEY--------- 147
Query: 165 SAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKD 224
EQ +EK + +FDSNCITPGT FM R+ + LR +V K+TTD
Sbjct: 148 --------EQYMEEKKNKF----KFDSNCITPGTLFMDRVAESLRTYVAEKLTTDP---- 191
Query: 225 TLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGL 284
WKDV +I+S PGEGEHKIMDY+R+ +++PDY+PN++H +YGLDADLIMLGL
Sbjct: 192 -----AWKDVKIIISDASVPGEGEHKIMDYVRHQRAQPDYDPNLKHIIYGLDADLIMLGL 246
Query: 285 CTHEPYFSLLREEVKFNTKS------NKGGSQIVTPEE----TKFFL------LHLSLMR 328
THE F +LRE ++ + KG I EE K FL LHL L++
Sbjct: 247 ATHEVNFDILREFIQPIARGVCHKCHKKGHLAIECKEEVDDSVKDFLVKNYQILHLHLLK 306
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
+YLELE K+ P F F I+ I+DD++ + F +GNDF+P+LP+L I +GA+ + K
Sbjct: 307 EYLELE-TKVSTP----FGFDIDRIVDDFIFLCFFVGNDFLPHLPNLEIKDGAIDRVIKC 361
Query: 389 YQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
Y+E+LP+ D Y+ G +N R + L + E F+ K
Sbjct: 362 YKELLPSFDDYLVSNGEVNFPRLSQIFVALTKGEEESFQRK 402
Score = 157 bits (398), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 131/242 (54%), Gaps = 29/242 (11%)
Query: 471 YDDG---TEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEV-L 526
YDD TE+ + + N YS+E WR ++ Q V NE +
Sbjct: 588 YDDSSLPTEKEIFFDNSRNIKYSEEG--WRDRYYQSCFQ--------------VENEDDI 631
Query: 527 RDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI-KDFSHLNL-KYEMGEPFLP 584
+ + Y+ + W L YY+ GC SW WYYP+HY+PYI+DI K F +YEMGEPF P
Sbjct: 632 KQICKSYVEGLVWVLKYYFKGCSSWGWYYPYHYSPYITDISKFFDQFEYPQYEMGEPFKP 691
Query: 585 FQQLLAVLPAASKELLPEPYQNLMTL-------ENSPILEYYPEEFATDLNGKKQDWEAV 637
F QL++VLP AS + +P+PYQ LM + E SPI+E+YP F D + ++ V
Sbjct: 692 FNQLMSVLPPASCQFVPKPYQKLMGISVDGEPVEESPIIEFYPRAFRIDRGPTEPLYKGV 751
Query: 638 VLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINEN 697
L+PFI+ +KL+K + E LLT+EE RN G L++ + + N+ +A + EN
Sbjct: 752 CLLPFINSIKLLKTISKTEPLLTEEEVDRNTLGHDLMFCHKDSNINSAFKEGSVTQLPEN 811
Query: 698 HA 699
+
Sbjct: 812 SS 813
>gi|119630592|gb|EAX10187.1| 5'-3' exoribonuclease 2, isoform CRA_b [Homo sapiens]
Length = 979
Score = 306 bits (784), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 191/486 (39%), Positives = 259/486 (53%), Gaps = 101/486 (20%)
Query: 1 MGVPKFFRYISERYP-----CLSEVVRE---YQIP-----------EFDNLYLDMNGIIH 41
MGVP FFR++S +YP C+ E +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP D P + E ++ IF YI+ LF +++P++L +MAIDGV
Sbjct: 61 PCTHPEDK-PAPK-NEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVY------------ 106
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
E+L A F L +C + ID APRAKMNQQR R
Sbjct: 107 ------CEILGMLATA----------LAFELLAYCQREG----GIDKWAPRAKMNQQRSR 146
Query: 162 RFRSAKE---AEVLEQKAKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYF 211
RFR++KE A V +Q+ +E KG LP E+ RFDSNCITPGT FM L + LRY+
Sbjct: 147 RFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYY 206
Query: 212 VKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHC 271
+ ++ D WK++ VILS PGEGEHKIMDYIR +++P+++PN HC
Sbjct: 207 IADRLNNDP---------GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHC 257
Query: 272 LYGLDADLIMLGLCTHEPYFSLLREEVKFNTK-----SNKGGSQIVTPE----------- 315
L G DADLIMLGL THEP F+++REE K N N+ G ++ E
Sbjct: 258 LCGADADLIMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHD 317
Query: 316 ---------ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGN 366
E +F L L+++R+YLE E L F F +E IDDWV M F +GN
Sbjct: 318 ELADSLPCAEGEFIFLRLNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGN 373
Query: 367 DFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF 426
DF+P+LP L I A+ L +Y+ V+ GY+ E GY+NL+R + + + + F
Sbjct: 374 DFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIF 433
Query: 427 REKYAD 432
+++ D
Sbjct: 434 KKRKDD 439
Score = 155 bits (391), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 546 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 605
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 606 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 665
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 666 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 715
>gi|156839637|ref|XP_001643507.1| hypothetical protein Kpol_473p8 [Vanderwaltozyma polyspora DSM
70294]
gi|156114121|gb|EDO15649.1| hypothetical protein Kpol_473p8 [Vanderwaltozyma polyspora DSM
70294]
Length = 1057
Score = 306 bits (784), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 174/462 (37%), Positives = 245/462 (53%), Gaps = 97/462 (20%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP----------EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP + +VV Q+P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEDAPQVVDGVQLPIDYSAPNQNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P E ++ +F Y + M +P+K+ +A+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENKPPP--ENEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A++ + E E + EK
Sbjct: 119 RSARDAKIQD----EAREEIMREK------------------------------------ 138
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
E+ + E + +K +DSN ITPGTPFM +L LRY+ K+ TD
Sbjct: 139 ----------EEIGEHIDESVRNKKTWDSNAITPGTPFMDKLAAALRYWTAFKLATDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK++ +I+S PGEGEHKIM++IR ++ P+YNPN HC+YGLDADLI L
Sbjct: 187 -------GWKNLQIIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEV------------KFNTKSNKGGSQIVTPEETK--FFLLHLSLMR 328
GL THEP+F +LRE+V K N + QI+ E+++ F LH+S++R
Sbjct: 240 GLATHEPHFKILREDVFAQGNNRKRHNFKDNINMTEEEKQIIMKEDSQKPFLWLHISVLR 299
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
+YL E + P FPF +E IDDWV M F GNDF+P+LP L + ++ +L +
Sbjct: 300 EYLSAELWVQRLP----FPFDLERAIDDWVFMCFFCGNDFLPHLPSLDVRENSIDILLDI 355
Query: 389 YQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
++ VLP L Y+ G LNL EK L +L S + + F+ ++
Sbjct: 356 WKVVLPNLKDYMTCDGELNLASVEKLLYQLGSREGDIFKTRH 397
Score = 174 bits (441), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 161/282 (57%), Gaps = 19/282 (6%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVL-RDQAECYIRAIQWNLHYYYNGCV 549
D DE R E G H + YY K + A+ L R YI + W L YYY GC
Sbjct: 601 DTDESVR---LYEPGYH-SRYYTSKFNIAEENITPLSRKVVRSYIEGVSWVLLYYYQGCA 656
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMT 609
SW+WYYP+HYAP+ SD + + + + +E+GEPFLP++QL++VLPAAS +LP+ +Q+LM
Sbjct: 657 SWNWYYPYHYAPFASDFTNIADMEINFELGEPFLPYEQLMSVLPAASGNMLPKVFQSLMR 716
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN-R 668
+S I+++YP EF D+NGKK W+ + L+PFIDE +L+K++ + +LTD E+SRN R
Sbjct: 717 NPDSEIVDFYPVEFLIDMNGKKMSWQGIALLPFIDEERLLKSVRSQYKVLTDSEKSRNVR 776
Query: 669 HGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPL--YRDDIYVHPNKLRKGLCQDVNL 726
+ +++ + NVN + Y + EN E+ + + + K ++G D+N
Sbjct: 777 NQEIVLISNKNVNYDKFVKELYTENL-ENPNFEQYFSHFNSGLSGYVGKDKEGF--DLNS 833
Query: 727 KLY----VTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII 764
K+ PTL T+ ++ P++N+SII+
Sbjct: 834 KILCPIQAGSLPTLS----TNLFLKMSYRMLPLPTKNKSIIL 871
>gi|448528644|ref|XP_003869739.1| Rat1 5'-->3' exoribonuclease [Candida orthopsilosis Co 90-125]
gi|380354093|emb|CCG23606.1| Rat1 5'-->3' exoribonuclease [Candida orthopsilosis]
Length = 964
Score = 306 bits (784), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 183/457 (40%), Positives = 250/457 (54%), Gaps = 91/457 (19%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE---------YQIP----EFDNLYLDMNGIIHNCSHP 46
MGVP FR++S++YP +S V+ E Y+ P E DNLYLDMNGI+H CSHP
Sbjct: 1 MGVPALFRWLSKKYPKIISPVIEEDQHEIGGAKYEDPNPNGEIDNLYLDMNGIVHPCSHP 60
Query: 47 NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 106
P TE ++F DIF Y + + M +P+K+ +A+DGVAPRAKMNQQR RRFRSA+
Sbjct: 61 EHKRPP--ETEDEMFLDIFTYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFRSAQ 118
Query: 107 EAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 166
+A+ + MAID
Sbjct: 119 DAKFKQ-------------------------------MAID------------------- 128
Query: 167 KEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTL 226
KE E + + + + +K++DSN ITPGTPFM RL + LRY+V K++TD
Sbjct: 129 KEIREKEARGEMINDAVKGKKQWDSNAITPGTPFMDRLAEALRYWVAYKLSTDP------ 182
Query: 227 SLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCT 286
W ++ VI+S PGEGEHK+M +IR +S P YNPN +HC+YGLDADLI LGL T
Sbjct: 183 ---GWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYNPNTKHCIYGLDADLIFLGLAT 239
Query: 287 HEPYFSLLREEVKFN-----TKSNKGG---SQIVTPEETK----FFLLHLSLMRDYLELE 334
HEP+F +LRE+V N T S+ G Q+ EE F LH++++R+YL +E
Sbjct: 240 HEPHFRVLREDVFANQERHMTVSDHVGMSKDQLSLIEERDKRKPFLWLHVNVLREYLSIE 299
Query: 335 FGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLP 394
L P + SF F +E IDDWV + F GNDF+P+LP L + + + L +++ LP
Sbjct: 300 ---LFNPQI-SFSFDLERAIDDWVFICFFAGNDFLPHLPSLDVRDNGIDTLVNCWKKCLP 355
Query: 395 TLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYA 431
L Y+ G LNL+ E L LA + E FR ++A
Sbjct: 356 RLRDYLTCDGKLNLQSVETLLGDLAIKEDEIFRNRFA 392
Score = 157 bits (397), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 103/159 (64%), Gaps = 5/159 (3%)
Query: 512 YHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSH 571
+H K D + +V RD + YI I W YYY GC SW+W+YP+HYAP+ SD+ +
Sbjct: 551 FHCKTD--EEVEQVRRDVVKSYIEGISWVALYYYQGCPSWTWFYPYHYAPFASDMTNLRE 608
Query: 572 L---NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLN 628
L +K+ +GEPF P++QL++VLPAAS LPE + LM +S I+E+YPEEF D+N
Sbjct: 609 LFPGGIKFNLGEPFKPYEQLMSVLPAASSHALPEVFHALMKDPDSEIIEFYPEEFEIDMN 668
Query: 629 GKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
GKK W+ + L+PFI+E +L+ A+ LT+ E+ RN
Sbjct: 669 GKKMSWQGIPLLPFINEKRLLDAVQGKYDQLTEYEKERN 707
>gi|366995071|ref|XP_003677299.1| hypothetical protein NCAS_0G00590 [Naumovozyma castellii CBS 4309]
gi|342303168|emb|CCC70946.1| hypothetical protein NCAS_0G00590 [Naumovozyma castellii CBS 4309]
Length = 1012
Score = 306 bits (783), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 179/461 (38%), Positives = 246/461 (53%), Gaps = 96/461 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------------YQIP----EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP +S V+ E Y P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEETPQVIDGVTLPLDYSAPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +F Y + M +P+K+ MA+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENRPPP--ETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A +E +A+E+ R E
Sbjct: 119 RSARDA-AIENEAREEILRQKEEI------------------------------------ 141
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
EV+++ K K K +DSN ITPGTPFM +L LRY+ K+ TD
Sbjct: 142 ------GEVIDEAVKNK-------KTWDSNAITPGTPFMDKLAASLRYWTAFKLATDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK++ +I+S PGEGEHKIM++IR ++ P+YNPN HC+YGLDADLI L
Sbjct: 187 -------GWKNLQIIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEV--KFNTKSNKGGSQIVTPEETK-----------FFLLHLSLMRD 329
GL THEP+F +LRE+V + N K + EE K F LH++++R+
Sbjct: 240 GLATHEPHFRILREDVFAQNNNKRRNFDDTLNMSEEEKQLLLAKDSEKPFLWLHINVLRE 299
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YL E + LSFPF +E IDDWV M F GNDF+P+LP L + ++ +L ++
Sbjct: 300 YLGAELFIPR----LSFPFDLERAIDDWVFMCFFCGNDFLPHLPSLDVRENSIDILLDIW 355
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+ VLP L Y+ G LNL+ E L +L S + + F+ ++
Sbjct: 356 KIVLPNLKTYMTCDGELNLESVEMLLQQLGSREGDIFKSRH 396
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 112/174 (64%), Gaps = 2/174 (1%)
Query: 511 YYHYKLDYAKVTNEVLR-DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF 569
YY K + E LR Y+ + W L YYY GC SW WYYP+HYAP+ SD D
Sbjct: 605 YYKAKCYVSDAEIEPLRKGMVRSYVEGVSWVLLYYYQGCASWDWYYPYHYAPFASDFFDI 664
Query: 570 SHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNG 629
+++ +++E+G+PFLP++QL++VLPAAS LP ++ LM+ +SPI+++YP EF D+NG
Sbjct: 665 TNIKVEFELGKPFLPYEQLMSVLPAASGHTLPAIFRPLMSEPDSPIIDFYPTEFPIDMNG 724
Query: 630 KKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR-HGPMLVYTYSNVNL 682
KK W+ + L+PFIDE +L++ + LT ERSRN + P+L+ + N N
Sbjct: 725 KKMSWQGISLLPFIDEKRLLETVRDQYPKLTPAERSRNVCNDPVLLISNKNANF 778
>gi|367005296|ref|XP_003687380.1| hypothetical protein TPHA_0J01240 [Tetrapisispora phaffii CBS 4417]
gi|357525684|emb|CCE64946.1| hypothetical protein TPHA_0J01240 [Tetrapisispora phaffii CBS 4417]
Length = 1113
Score = 306 bits (783), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 185/492 (37%), Positives = 267/492 (54%), Gaps = 102/492 (20%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP----------EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP + ++V +P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEETPQIVDGVALPIDYSSENPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +F Y + M +P+K+ +A+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENRPPP--ETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A+ E +A+E+ LK
Sbjct: 119 RSARDAK-FENEAREE-------------ILK---------------------------- 136
Query: 163 FRSAKEA--EVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
KEA +V+++ K+K K +DSN ITPGTPFM +L LRY+ K++TD
Sbjct: 137 ---DKEAAGQVIDEAVKQK-------KTWDSNAITPGTPFMDKLAAALRYWTAFKLSTDP 186
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
WK++ VI+S PGEGEHK+M++IR ++ P+YNPN HC+YGLDADLI
Sbjct: 187 ---------GWKNLQVIISDATVPGEGEHKLMNFIRAQRADPEYNPNTTHCIYGLDADLI 237
Query: 281 MLGLCTHEPYFSLLREEV--------KFNTKSN----KGGSQIVTPEETK--FFLLHLSL 326
LGL THEP+F +LRE+V K N K + Q++T E+++ F LH+++
Sbjct: 238 FLGLATHEPHFKILREDVFAQGSKPKKHNFKDGLDMTEEEKQLITKEDSQKPFLWLHINV 297
Query: 327 MRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLY 386
+R+YL E + LSFPF IE IDDWV M F GNDF+P+LP L + ++ +L
Sbjct: 298 LREYLSAELWVPR----LSFPFDIERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDILL 353
Query: 387 KVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY-ADIQYLEGKMGKKFS 445
+++ +LP L Y+ G LNL+ E L++L S + + F+ ++ +++ E KK
Sbjct: 354 DIWKRILPNLKTYMTCDGELNLESVELLLSQLGSREADIFKTRHLQEVRKKESMERKKQQ 413
Query: 446 DVFHKEKSKEMD 457
+ K SK D
Sbjct: 414 RIDRKNISKGQD 425
Score = 177 bits (448), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 114/160 (71%), Gaps = 1/160 (0%)
Query: 523 NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPF 582
+++ +D YI + W L YYY GC SW+WYYP+HYAP+ +D + + +++K+++GEPF
Sbjct: 645 DQLKKDVVRYYIEGVSWVLLYYYQGCASWNWYYPYHYAPFAADFTNLTDISIKFDLGEPF 704
Query: 583 LPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPF 642
LPF+QL++V+PAAS LPE ++ LM+ S I+++YPE+F D+NGKK W+ + L+PF
Sbjct: 705 LPFEQLMSVMPAASGHTLPEIFRPLMSDPKSEIIDFYPEQFPIDMNGKKMSWQGIALLPF 764
Query: 643 IDEVKLIKAMDAVEHLLTDEERSRN-RHGPMLVYTYSNVN 681
IDE +L+KA+ + L+D+E+SRN R +LV + N N
Sbjct: 765 IDETRLLKAVRSKYEFLSDQEKSRNVRKKAILVISNKNAN 804
>gi|328865681|gb|EGG14067.1| 5'-3' exoribonuclease [Dictyostelium fasciculatum]
Length = 1157
Score = 305 bits (782), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 181/448 (40%), Positives = 254/448 (56%), Gaps = 90/448 (20%)
Query: 1 MGVPKFFRYISERY---------PCLSEVVR------EYQI-PEFDNLYLDMNGIIHNCS 44
MG+P FFR++ ++Y P S+ R E + EFDNLYLDMNGIIH C+
Sbjct: 1 MGIPAFFRWLVDKYGNVITPTKEPRDSDGSRLKCDFSELNVNGEFDNLYLDMNGIIHPCA 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
HP + P R T+ + I Y+++LF +I+P+KL +MAIDGVAPRAKMNQQR RRFR+
Sbjct: 61 HP-EKGPKPRNTQ-DMMDSIVEYLDLLFAIIRPRKLIYMAIDGVAPRAKMNQQRARRFRA 118
Query: 105 AKEAEVL-EQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRF 163
A ++ + EQ A++ ERL
Sbjct: 119 ALDSRITKEQAARDLIERLNNGS------------------------------------- 141
Query: 164 RSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWK 223
S ++ + +++ EK FDSNCITPGT FM + LR +V KI+TD
Sbjct: 142 LSQEDYDAIQKDGAEK-------YHFDSNCITPGTEFMALVALTLRQYVAEKISTDP--- 191
Query: 224 DTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLG 283
WKDV VI+S PGEGEHKIM+YIR+ +S+PDYNPN++H +YGLDADLIML
Sbjct: 192 ------AWKDVKVIISDASVPGEGEHKIMEYIRHQRSQPDYNPNLKHVMYGLDADLIMLA 245
Query: 284 LCTHEPYFSLLREEVKFNTKSNKGGSQIVTP------EETKFF------LLHLSLMRDYL 331
L THE F +LRE + K N+ G+ TP +E K F LL+L+++R+YL
Sbjct: 246 LSTHEVNFDILREFIA-PPKGNRFGTPAPTPSKDVDEDEVKDFLVKDYQLLNLAILREYL 304
Query: 332 ELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQE 391
+ E K P F +++E IIDD++ + F +GNDF+P+LP L I GA+ L ++Y+E
Sbjct: 305 DTEL-KCNPP----FEYNVERIIDDFIFICFFVGNDFLPHLPSLQINEGAIDRLMRIYKE 359
Query: 392 VLPTLDGYINEGGYLNLKRFEKFLTKLA 419
+LPT +GY+ + G ++L R K +L+
Sbjct: 360 LLPTFEGYLTDNGEIDLDRLRKVFVRLS 387
Score = 160 bits (405), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 118/185 (63%), Gaps = 8/185 (4%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
+T YY + + + NE++R + Y+ + W L YY++GC SW WYYP+HYAP+I D+
Sbjct: 580 RTRYYEHHFETEQPQNELVRAICQSYVDGLAWVLRYYFHGCCSWGWYYPYHYAPFILDLA 639
Query: 568 DFSHLNL--KYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL------ENSPILEYY 619
+ + + ++E+G PF PFQQL++VLP AS + +P+PY+ +M + N IL +Y
Sbjct: 640 ENGSMIVEPQFELGAPFRPFQQLMSVLPKASGQFVPKPYRTMMGISIDGEDRNDVILHFY 699
Query: 620 PEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSN 679
P EF D+ + W+ V +PFIDE +L+ A+ +++ LT++E RN HG L+ ++++
Sbjct: 700 PNEFLIDVAPGQPTWKGVCQLPFIDENELLSALKPLDNSLTEDEAFRNSHGTDLIISHNS 759
Query: 680 VNLGT 684
++G+
Sbjct: 760 TSIGS 764
>gi|440793174|gb|ELR14365.1| Exonuclease ii, putative [Acanthamoeba castellanii str. Neff]
Length = 1421
Score = 305 bits (781), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/394 (44%), Positives = 230/394 (58%), Gaps = 86/394 (21%)
Query: 36 MNGIIHNCSHPNDNDPHF-RITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKM 94
MNGIIHNC+HP ND +++EK++ +IQ F ID
Sbjct: 1 MNGIIHNCTHPEWNDNVLNKLSEKEM-------------IIQ----IFHYID-------- 35
Query: 95 NQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAK 154
R F + K P+KL ++AIDGVAPRAK
Sbjct: 36 -----RLFHAVK-------------------------------PQKLIYLAIDGVAPRAK 59
Query: 155 MNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKL 214
MNQQR RR R+A+E++ +KA+E GE++ E FDSNCITPGT FM +L L+YF++
Sbjct: 60 MNQQRQRRLRTAQESKEALEKARETGEKV-QEDMFDSNCITPGTEFMAKLSDYLKYFIRK 118
Query: 215 KITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYG 274
KI D W+ V VILSGHE PGEGEHKIM+YIR K P+++PN RHCLYG
Sbjct: 119 KIKEDS---------AWRKVEVILSGHEVPGEGEHKIMEYIRRQKMLPEHDPNTRHCLYG 169
Query: 275 LDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET--KFFLLHLSLMRDYLE 332
LDADLIML L +HEP+F+LLREEV F + K PE T KF LL ++L+R+YL+
Sbjct: 170 LDADLIMLALASHEPHFALLREEVTFGRRKKK-------PEATPPKFQLLFVNLLREYLD 222
Query: 333 LEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEV 392
EF L F + +E +IDD+VL F +GNDF+PNLP + I +GAL ++ +Y+E+
Sbjct: 223 EEFRT-----ELPFGYDLERVIDDFVLFCFFVGNDFLPNLPYMDIADGALDKMFDIYREL 277
Query: 393 LPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF 426
LPTL GYI E G + +R EKFL ++A ++ E
Sbjct: 278 LPTLGGYITEKGEILWERCEKFLKQIAKYEQEML 311
Score = 304 bits (778), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 233/788 (29%), Positives = 375/788 (47%), Gaps = 122/788 (15%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K E + Y+ + W L YYY GC SW+W++P HYAP SD+
Sbjct: 439 KNWYYRDKFRIGLENEEYHKHLRTSYLEGLVWVLRYYYRGCCSWNWFFPFHYAPLCSDLV 498
Query: 568 DFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDL 627
+ + LK+++G PF PFQQL+ VLPAASK LLP PYQ LMT SPI+++YPEEF D+
Sbjct: 499 NLTSYKLKFDLGTPFYPFQQLMGVLPAASKTLLPVPYQELMTRATSPIIDFYPEEFKVDM 558
Query: 628 NGKKQDWEAVVLIPFIDEVKLIKAMDAVE-HLLTDEERSRNRHGPMLVYTY--SNVNLGT 684
NGK+ WEA+ LIPFIDE +L+ AMD V+ + L+++ER R+ G V++Y +N L
Sbjct: 559 NGKRNAWEAIALIPFIDEKRLLDAMDTVDKNRLSEKERKRDSFGVAYVFSYDAANETLFP 618
Query: 685 ALAPDYFPAINENHAVEKPLYRDDI--------YVHPNKLRKGLCQDVNLKLYVTHFPTL 736
P F +N ++ D Y+ PN + GL FPTL
Sbjct: 619 TPMPGVFADLNPCLVAQREFRLADWGPEGQITPYLLPNA-KFGLQNQPG-------FPTL 670
Query: 737 KHVQFTHKIENAKVKVFQQPSRNESIII----------------VQDKVQVPS------- 773
++++ T ++ A + VF SR +S+++ V + PS
Sbjct: 671 QNLRHTSQLAYAGLSVFGTSSRKQSLLLKLLPPEGQEPKDKLTQVNSGAEAPSALLTKEH 730
Query: 774 ------LKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQD 827
QV D +LGKTI++ +P+L E V ++ + R S + G V R +
Sbjct: 731 AVDDVDASQVQD-LLGKTIYVEWPYLKEALVLGISDDECRTS--QAQGTV--RHSVGDSG 785
Query: 828 AFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYA 887
A+ K + Y K G+DIG +V+++ Q + K R ++ R + Y
Sbjct: 786 AWLKESKYQRNHYKAKKGMDIGEVKVMLHVQVLRGMKV----RKDGSRVRMWRTVDDIYP 841
Query: 888 YQSAVLNLQQARESLEYK---TIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKL 944
Q+ V L+ + +++E F P Q + P GG + TV E
Sbjct: 842 LQTIVKEHYAPDPRLQERGAPSVEEAF-PIGQRVVYTGPGQNFGG--LGTVAEH------ 892
Query: 945 SFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKR 1004
+ E V ++ +T N+ V+ +L+ISP +LS+ ++
Sbjct: 893 ---LPTEAGCVPNVRVELETQENFYHLSEVSRRLNISPKVLSKHQN------------RK 937
Query: 1005 HNIGLNIKFSRKNEEVVGFTRRDETTKK-------WFYTEQVVTLIKNYMKQFPEVFGFL 1057
NIGL IKF+RK ++++G+T+R ET W Y+ + + L+ +M++FP++F L
Sbjct: 938 INIGLRIKFTRKGQQMLGYTQRIETPSTNGISRGYWMYSAKALDLVYEFMQRFPDLFQAL 997
Query: 1058 K--DHSSDDIYLRDDVFPH-QGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIE 1114
+ D +++ + +FP+ +R+ ++ WLK + P G+ + + V
Sbjct: 998 EADDAQEIEVFSPEMLFPNGNAAERMTEVEEWLKNLETNNLQRVPIGSKAMPKEAV---- 1053
Query: 1115 HAVDTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYR 1174
+ VE++ +V N K ++ L +RV+N+RD +P G +
Sbjct: 1054 ------KTVEEESNRYVANNNARKKKTESTQM------DIPLGERVMNLRDNGPIPFGLK 1101
Query: 1175 GTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYR-MPAQAMINLSYG---ER 1228
GT+ GIV + + +VVFD+ F G + RCS+ RG + +PA ++NL G +R
Sbjct: 1102 GTVTGIV------NNLLEVVFDEEFLGGTNLGNRCSDLRGQQHIPATTVLNLGRGHGAKR 1155
Query: 1229 LCGNSNPH 1236
NS P
Sbjct: 1156 GGRNSGPQ 1163
>gi|330040606|ref|XP_003239969.1| dhm exonuclease [Cryptomonas paramecium]
gi|327206895|gb|AEA39071.1| dhm exonuclease [Cryptomonas paramecium]
Length = 541
Score = 305 bits (780), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 208/559 (37%), Positives = 282/559 (50%), Gaps = 113/559 (20%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKKL FMA DGV+PRAKMNQQR RRFR+ KE + + K E+ FDSNCITPG
Sbjct: 71 PKKLIFMAFDGVSPRAKMNQQRSRRFRT-KETNMKQNKNFTHS----NEEVFDSNCITPG 125
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIR- 256
T FM RL + ++K K+ D WK VI S E PGEGEHKIM+YIR
Sbjct: 126 TEFMKRLSFFFKKWLKNKVKFDSEWKQGCD--------VIFSSSEVPGEGEHKIMNYIRK 177
Query: 257 ----YMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV------KFNTKS-- 304
Y + K ++HCLYGLDADLIMLGL +HE F+LLRE++ FN ++
Sbjct: 178 IQKVYFQYKKS---TLKHCLYGLDADLIMLGLLSHEKNFTLLREKIFHRGTTTFNKETCL 234
Query: 305 NKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLI 364
+K + +++ E F LL +SL+RD + LEF K + F + +E IIDD++ M L+
Sbjct: 235 DKNLNLLMSEE---FHLLEISLLRDMIFLEF---KPKKTILFKYDVERIIDDFIFMCMLL 288
Query: 365 GNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS---- 420
GNDFIP LP L+I G L LL + Y+E+ LDGY+ + ++ R E F K++S
Sbjct: 289 GNDFIPGLPHLNITQGGLNLLVRSYKEIQQKLDGYLTKKHQIHFGRAELFFRKISSEAES 348
Query: 421 -FDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVL 479
F F + +EK + Y KF + E L+ LIK
Sbjct: 349 LFFFRRKQEKTGNETYKSSYYLSKFKFTYQIEHG-----FLSNLIK-------------- 389
Query: 480 NYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQW 539
NY + G H +Y++K + W
Sbjct: 390 NYIH---------------------GLHWCLFYYHK-------------------KCPSW 409
Query: 540 NLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKEL 599
N W+YP +Y+P SD+ + + + G PF P QLLAVLP S
Sbjct: 410 N------------WFYPEYYSPLCSDLVNLCPFEIFFTKGRPFSPLIQLLAVLPPRSSVF 457
Query: 600 LPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV--EH 657
LP + NLM E SP+ +YP E+ DLNGKK WE +VL+PFIDE KL+ A+ +
Sbjct: 458 LPSSFANLMLNEKSPVKCFYPYEYKIDLNGKKNVWEGIVLLPFIDENKLLDAIKMFIKKE 517
Query: 658 LLTDEERSRNRHGPMLVYT 676
L+ +E+ RN +V+T
Sbjct: 518 QLSIQEKERNSFARDIVFT 536
Score = 124 bits (310), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 82/114 (71%), Gaps = 7/114 (6%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR+ISERYP +++ + +FD YLDMNGI+H+C + P+ EK I
Sbjct: 1 MGVPKFFRWISERYPLVNQKIINQN--DFDCFYLDMNGIVHSCFQ-KFSSPY---REKNI 54
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQK 114
FQ+IF Y E LFR+++PKKL FMA DGV+PRAKMNQQR RRFR+ KE + + K
Sbjct: 55 FQEIFFYTEYLFRIVKPKKLIFMAFDGVSPRAKMNQQRSRRFRT-KETNMKQNK 107
>gi|320584179|gb|EFW98390.1| 5'-3' exoribonuclease, putative [Ogataea parapolymorpha DL-1]
Length = 967
Score = 304 bits (779), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 177/458 (38%), Positives = 245/458 (53%), Gaps = 97/458 (21%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------------YQIP----EFDNLYLDMNGIIHN 42
MGVP FR++S +YP +S V+ E Y P E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVIEEEPIVVGDVEQPVQYSNPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +IF Y + + M +P+KL +A+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENKPPP--ETEAEMMVEIFRYTDRVLNMARPRKLLMIAVDGVAPRAKMNQQRSRRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A + A+E+ ER E+
Sbjct: 119 RSARDAAL----AQEELERQIQER------------------------------------ 138
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
E + +E + +K +DSN ITPGTPFM L + LRY+V K+ D
Sbjct: 139 ----------EMRGEEIDLAIKGKKSWDSNSITPGTPFMDILARSLRYWVAYKLANDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
W + VI+S PGEGEHKIM++IR +S P+YNPN HC+YGLDADLI L
Sbjct: 187 -------GWASLQVIISDATVPGEGEHKIMNFIRSQRSDPEYNPNTTHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEVKFNTKSN---KGGSQIVTPEETK-----------FFLLHLSLMR 328
GL THEP+F +LRE+V ++ K Q+ E T+ F LH+S++R
Sbjct: 240 GLATHEPHFKVLREDVFAKDQAQRQLKLADQVNMDEATRQRLLAADQKKPFLWLHVSILR 299
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
+YLE+E + LSF F +E IDDWV M F +GNDF+P+LP L + + + +L +
Sbjct: 300 EYLEVELNIPR----LSFNFDLERAIDDWVFMCFFVGNDFLPHLPSLDVRDNGIDILVDI 355
Query: 389 YQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF 426
++ VLP++ Y+ G LNL+ E ++ LA + E F
Sbjct: 356 WKRVLPSMKDYLTCDGKLNLEGVETLMSHLAQKEDEIF 393
Score = 159 bits (402), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 507 HKTDYYHYKLDY--AKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYIS 564
+KT YY K + A+ ++ +D CY+ I W L YY+ GC SW+WYYP+HYAP+ +
Sbjct: 554 YKTRYYQQKFETTDAEEIEKIRKDMVRCYVEGISWALLYYFQGCPSWNWYYPYHYAPFAA 613
Query: 565 DIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFA 624
D + S + ++++ G PF PF+QL++VLPAAS LPE ++ LM+ +S I+++YP +F
Sbjct: 614 DFTNLSDIKVEFKQGTPFRPFEQLMSVLPAASGHNLPEVFRPLMSEPHSEIIDFYPTDFK 673
Query: 625 TDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
D+NG K W+ + L+PFIDE +L+K + LT+ E RN
Sbjct: 674 IDMNGAKMAWQGICLLPFIDETRLLKTVREKYSELTEYEIERN 716
>gi|151945677|gb|EDN63918.1| 5'-3'-exoribonuclease [Saccharomyces cerevisiae YJM789]
gi|190407386|gb|EDV10653.1| 5'-3' exoribonuclease [Saccharomyces cerevisiae RM11-1a]
gi|259149530|emb|CAY86334.1| Rat1p [Saccharomyces cerevisiae EC1118]
gi|323346498|gb|EGA80785.1| Rat1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365763283|gb|EHN04813.1| Rat1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1006
Score = 304 bits (779), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 182/461 (39%), Positives = 246/461 (53%), Gaps = 96/461 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------------YQIP----EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP +S V+ E Y P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSAPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +F Y + M +P+K+ MA+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENKPPP--ETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A++ E +A+E+ R E
Sbjct: 119 RSARDAQI-ENEAREEIMRQREEV------------------------------------ 141
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
E+++ + K K +DSN ITPGTPFM +L LRY+ K+ TD
Sbjct: 142 ------GEIIDDAVRNK-------KTWDSNAITPGTPFMDKLAAALRYWTAFKLATDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK++ VI+S PGEGEHKIM++IR ++ P+YNPN HC+YGLDADLI L
Sbjct: 187 -------GWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEV--KFNTKSNKGGSQIVTPEETKFFL-----------LHLSLMRD 329
GL THEP+F +LRE+V + N K N I EE K FL LH++++R+
Sbjct: 240 GLATHEPHFKILREDVFAQDNRKRNNLKDTINMTEEEKQFLQKQNSEQPFLWLHINVLRE 299
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YL E L PG L F F +E IDDWV M F GNDF+P+LP L + ++ +L ++
Sbjct: 300 YLSAE---LWVPG-LPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDILLDIW 355
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+ VLP L Y+ G LNL E L L S + + F+ ++
Sbjct: 356 KVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRH 396
Score = 183 bits (464), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLR-DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAP 561
E G H+ YY K E LR D +CYI + W L YYY GC SW+W+YP+HYAP
Sbjct: 601 EPGYHER-YYTAKFHVTPQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNWFYPYHYAP 659
Query: 562 YISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
+D FSHL +K+E G PFLP++QL++VLPAAS LP+ +++LM+ +S I+++YPE
Sbjct: 660 LATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKIFRSLMSEPDSEIIDFYPE 719
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG-PMLVYTYSNV 680
EF D+NGKK W+ + L+PFID+ +L+ A+ A LL+D ER+RN G P+L+ + N
Sbjct: 720 EFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAERARNIRGEPVLLISNKNA 779
Query: 681 N 681
N
Sbjct: 780 N 780
>gi|256273435|gb|EEU08371.1| Rat1p [Saccharomyces cerevisiae JAY291]
Length = 1006
Score = 304 bits (779), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 183/461 (39%), Positives = 248/461 (53%), Gaps = 96/461 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------------YQIP----EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP +S V+ E Y P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSAPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +F Y + M +P+K+ MA+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENKPPP--ETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A++ E +A+E+ R QR
Sbjct: 119 RSARDAQI-ENEAREEIMR------------------------------------QR--- 138
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
+ E+++ + K K +DSN ITPGTPFM +L LRY+ K+ TD
Sbjct: 139 ---EEVGEIIDDAVRNK-------KTWDSNAITPGTPFMDKLAAALRYWTAFKLATDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK++ VI+S PGEGEHKIM++IR ++ P+YNPN HC+YGLDADLI L
Sbjct: 187 -------GWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEV--KFNTKSNKGGSQIVTPEETKFFL-----------LHLSLMRD 329
GL THEP+F +LRE+V + N K N I EE K FL LH++++R+
Sbjct: 240 GLATHEPHFKILREDVFAQDNRKRNNLKDTINMTEEEKQFLQKQNSEQPFLWLHINVLRE 299
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YL E L PG L F F +E IDDWV M F GNDF+P+LP L + ++ +L ++
Sbjct: 300 YLSAE---LWVPG-LPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDILLDIW 355
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+ VLP L Y+ G LNL E L L S + + F+ ++
Sbjct: 356 KVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRH 396
Score = 183 bits (464), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLR-DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAP 561
E G H+ YY K E LR D +CYI + W L YYY GC SW+W+YP+HYAP
Sbjct: 601 EPGYHER-YYTAKFHVTPQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNWFYPYHYAP 659
Query: 562 YISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
+D FSHL +K+E G PFLP++QL++VLPAAS LP+ +++LM+ +S I+++YPE
Sbjct: 660 LATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKIFRSLMSEPDSEIIDFYPE 719
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG-PMLVYTYSNV 680
EF D+NGKK W+ + L+PFID+ +L+ A+ A LL+D ER+RN G P+L+ + N
Sbjct: 720 EFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAERARNIRGEPVLLISNKNA 779
Query: 681 N 681
N
Sbjct: 780 N 780
>gi|392296379|gb|EIW07481.1| Rat1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1006
Score = 304 bits (779), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 183/461 (39%), Positives = 248/461 (53%), Gaps = 96/461 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------------YQIP----EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP +S V+ E Y P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSAPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +F Y + M +P+K+ MA+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENKPPP--ETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A++ E +A+E+ R QR
Sbjct: 119 RSARDAQI-ENEAREEIMR------------------------------------QR--- 138
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
+ E+++ + K K +DSN ITPGTPFM +L LRY+ K+ TD
Sbjct: 139 ---EEVGEIIDDAVRNK-------KTWDSNAITPGTPFMDKLAAALRYWTAFKLATDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK++ VI+S PGEGEHKIM++IR ++ P+YNPN HC+YGLDADLI L
Sbjct: 187 -------GWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEV--KFNTKSNKGGSQIVTPEETKFFL-----------LHLSLMRD 329
GL THEP+F +LRE+V + N K N I EE K FL LH++++R+
Sbjct: 240 GLATHEPHFKILREDVFAQDNRKRNNLKDTINMTEEEKQFLQKQNSEQPFLWLHINVLRE 299
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YL E L PG L F F +E IDDWV M F GNDF+P+LP L + ++ +L ++
Sbjct: 300 YLSAE---LWVPG-LPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDILLDIW 355
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+ VLP L Y+ G LNL E L L S + + F+ ++
Sbjct: 356 KVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRH 396
Score = 183 bits (464), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLR-DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAP 561
E G H+ YY K E LR D +CYI + W L YYY GC SW+W+YP+HYAP
Sbjct: 601 EPGYHER-YYTAKFHVTPQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNWFYPYHYAP 659
Query: 562 YISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
+D FSHL +K+E G PFLP++QL++VLPAAS LP+ +++LM+ +S I+++YPE
Sbjct: 660 LATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKIFRSLMSEPDSEIIDFYPE 719
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG-PMLVYTYSNV 680
EF D+NGKK W+ + L+PFID+ +L+ A+ A LL+D ER+RN G P+L+ + N
Sbjct: 720 EFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAERARNIRGEPVLLISNKNA 779
Query: 681 N 681
N
Sbjct: 780 N 780
>gi|349581214|dbj|GAA26372.1| K7_Rat1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1006
Score = 304 bits (779), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 182/461 (39%), Positives = 246/461 (53%), Gaps = 96/461 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------------YQIP----EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP +S V+ E Y P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSAPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +F Y + M +P+K+ MA+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENKPPP--ETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A++ E +A+E+ R E
Sbjct: 119 RSARDAQI-ENEAREEIMRQREEV------------------------------------ 141
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
E+++ + K K +DSN ITPGTPFM +L LRY+ K+ TD
Sbjct: 142 ------GEIIDDAVRNK-------KTWDSNAITPGTPFMDKLAAALRYWTAFKLATDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK++ VI+S PGEGEHKIM++IR ++ P+YNPN HC+YGLDADLI L
Sbjct: 187 -------GWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEV--KFNTKSNKGGSQIVTPEETKFFL-----------LHLSLMRD 329
GL THEP+F +LRE+V + N K N I EE K FL LH++++R+
Sbjct: 240 GLATHEPHFKILREDVFAQDNRKRNNLKDTINMTEEEKQFLQKQISEQPFLWLHINVLRE 299
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YL E L PG L F F +E IDDWV M F GNDF+P+LP L + ++ +L ++
Sbjct: 300 YLSAE---LWVPG-LPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDILLDIW 355
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+ VLP L Y+ G LNL E L L S + + F+ ++
Sbjct: 356 KVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRH 396
Score = 183 bits (464), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLR-DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAP 561
E G H+ YY K E LR D +CYI + W L YYY GC SW+W+YP+HYAP
Sbjct: 601 EPGYHER-YYTAKFHVTPQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNWFYPYHYAP 659
Query: 562 YISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
+D FSHL +K+E G PFLP++QL++VLPAAS LP+ +++LM+ +S I+++YPE
Sbjct: 660 LATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKIFRSLMSEPDSEIIDFYPE 719
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG-PMLVYTYSNV 680
EF D+NGKK W+ + L+PFID+ +L+ A+ A LL+D ER+RN G P+L+ + N
Sbjct: 720 EFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAERARNIRGEPVLLISNKNA 779
Query: 681 N 681
N
Sbjct: 780 N 780
>gi|298707210|emb|CBJ29957.1| 5'-3' exoribonuclease 1 [Ectocarpus siliculosus]
Length = 488
Score = 304 bits (778), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 175/445 (39%), Positives = 245/445 (55%), Gaps = 33/445 (7%)
Query: 129 DFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKR 188
D I P+++ +MAIDGVAPRAKMNQQR RRFR+ K+ + + A+ KGE +
Sbjct: 70 DRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEAKLIAESKGEVVDDTAV 129
Query: 189 FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGE 248
FDSNCITPGT FM ++ + LRYFV+ KIT D L WK + V SGHE PGEGE
Sbjct: 130 FDSNCITPGTEFMAKISRHLRYFVQKKITEDPL---------WKALTVTFSGHEVPGEGE 180
Query: 249 HKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF--NTKSNK 306
HKIM YIR +S PN RHC+YG DADLI+LGL THEP+F+LLRE V F N K
Sbjct: 181 HKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNAARGK 240
Query: 307 GGSQIV--TPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLI 364
S++V T + +F LLHLS++R+Y+ EF + P + E ++DD+V + FL+
Sbjct: 241 NASKVVVKTTRDAQFQLLHLSVLREYVWAEFTR-DMPEETAAEMDRERVVDDFVFLTFLV 299
Query: 365 GNDFIPNLPDLHIINGALPLLYKVYQEVLPTL--DGYINEGGYLNLK-RFEKFLTKLASF 421
GNDF+P++P L I A LL+++Y+ + P GY+ G ++ R E FL+++ S
Sbjct: 300 GNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDCADRLEAFLSEVGSR 359
Query: 422 DFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNY 481
+ E F E+ + G+ +K S F + + + ++A Y+ + + Y
Sbjct: 360 EDEIFSERAEEEAEFRGRR-RKTSKRFGRAEEVPSEAEIALEEAKRQRSYEKAMLDTMGY 418
Query: 482 ANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNL 541
E D +K YY K + E+ Y+ + W L
Sbjct: 419 VPETEDGGKD---------------YKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCL 463
Query: 542 HYYYNGCVSWSWYYPHHYAPYISDI 566
YYY GCVSW W++P HY P ISD+
Sbjct: 464 AYYYRGCVSWGWFFPFHYVPMISDL 488
Score = 150 bits (378), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 99/131 (75%), Gaps = 2/131 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQI-PEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MGVPKF+R+ISERYP ++++V + + PEFDNLYLDMNGI+H C+HPND+ +++E+
Sbjct: 1 MGVPKFYRWISERYPKINQIVSDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERD 60
Query: 60 IFQDIFHYIE-ILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
I IFHYI+ I+ +++P+++ +MAIDGVAPRAKMNQQR RRFR+ K+ + + A+ K
Sbjct: 61 IILGIFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEAKLIAESK 120
Query: 119 GERLPTEKRFD 129
GE + FD
Sbjct: 121 GEVVDDTAVFD 131
>gi|401623665|gb|EJS41757.1| rat1p [Saccharomyces arboricola H-6]
Length = 1006
Score = 304 bits (778), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 182/461 (39%), Positives = 246/461 (53%), Gaps = 96/461 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------------YQIP----EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP +S V+ E Y P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQVVDGVILPLDYSAPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +F Y + M +P+K+ MA+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENKPPP--ETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A+V E +A+E+ R E
Sbjct: 119 RSARDAQV-ENEAREEVMRQREEV------------------------------------ 141
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
E+++ + K K +DSN ITPGTPFM +L LRY+ K+ TD
Sbjct: 142 ------GEIIDDAVRNK-------KTWDSNAITPGTPFMDKLAAALRYWTAFKLATDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK++ VI+S PGEGEHKIM++IR ++ P+YNPN HC+YGLDADLI L
Sbjct: 187 -------GWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEV--KFNTKSNKGGSQIVTPEETKFFL-----------LHLSLMRD 329
GL THEP+F +LRE+V + N K N + EE K FL LH++++R+
Sbjct: 240 GLATHEPHFKILREDVFAQDNRKRNNIKDTMNMTEEEKQFLQKQNSEQPFLWLHINVLRE 299
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YL E L PG L F F +E IDDWV M F GNDF+P+LP L + ++ +L ++
Sbjct: 300 YLSAE---LWVPG-LPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDILLDIW 355
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+ VLP L Y+ G LNL E L L S + + F+ ++
Sbjct: 356 KVVLPRLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRH 396
Score = 181 bits (460), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 120/182 (65%), Gaps = 3/182 (1%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLR-DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAP 561
E G H+ YY K A + LR D +CYI + W L YYY GC SW+W+YP+HYAP
Sbjct: 598 EPGYHER-YYTAKFRVAPHDIDQLRKDMVKCYIEGVAWVLTYYYQGCASWNWFYPYHYAP 656
Query: 562 YISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
+D FSHL +K+E G PFLPF+QL++VLPAAS LP+ ++ LM+ +S I+++YPE
Sbjct: 657 LATDFHGFSHLEIKFEEGTPFLPFEQLMSVLPAASGHALPKIFRTLMSESDSEIIDFYPE 716
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG-PMLVYTYSNV 680
EF D+NGKK W+ + L+PFID+ +L+ + A LL++ ER+RN G P+L+ + N
Sbjct: 717 EFPIDMNGKKMSWQGIALLPFIDQDRLLTVVRAQYPLLSEAERARNVRGKPVLLISNKNA 776
Query: 681 NL 682
N
Sbjct: 777 NF 778
>gi|164658822|ref|XP_001730536.1| hypothetical protein MGL_2332 [Malassezia globosa CBS 7966]
gi|159104432|gb|EDP43322.1| hypothetical protein MGL_2332 [Malassezia globosa CBS 7966]
Length = 1133
Score = 303 bits (777), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 169/421 (40%), Positives = 230/421 (54%), Gaps = 86/421 (20%)
Query: 28 EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDG 87
E+D LYLDMNGI+H C+HP P TE+ + ++F Y E + MI+P+KL MAIDG
Sbjct: 24 EYDCLYLDMNGIVHPCTHPEGKPPP--ETEEDMMAEVFKYTERVINMIRPRKLLMMAIDG 81
Query: 88 VAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAID 147
VAPRAKMNQQR RRFRSA++A++L Q+
Sbjct: 82 VAPRAKMNQQRSRRFRSAQDAKILHQQ--------------------------------- 108
Query: 148 GVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE-KGERLPTEKRFDSNCITPGTPFMCRLHQ 206
+E E+ E+K K GE EK +DSN ITPGTPFM L
Sbjct: 109 -------------------REQELEERKRKGLAGENERIEKSWDSNAITPGTPFMDLLAS 149
Query: 207 QLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNP 266
LRY++ K+ TD WK++CV+LS PGEGEHKIMDYIR +S P+++P
Sbjct: 150 SLRYWIAHKLNTDP---------GWKNLCVVLSDASVPGEGEHKIMDYIRRKRSDPNHDP 200
Query: 267 NMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQI--------------- 311
NMRH +YGLDADLIML L THEP+F +LRE+V ++G +
Sbjct: 201 NMRHVIYGLDADLIMLSLATHEPHFKVLREDVFSQDAKHRGCHRCGQEGHVAANCRGEAR 260
Query: 312 --VTPEETK-FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDF 368
P + K F L + +R+YL++E L+ PG SFPF +E IDDWV + F +GNDF
Sbjct: 261 NEAKPFQKKPFIFLDVPTLREYLQVE---LRTPGT-SFPFDLERAIDDWVFLIFFVGNDF 316
Query: 369 IPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFRE 428
+P+LP L I GA+ L ++++ LP + GY+ G + L + L LA + + FR+
Sbjct: 317 LPHLPSLEIREGAIDTLLRIWKRELPNMSGYVTNNGKVELANAQYILDGLAEVEDDIFRK 376
Query: 429 K 429
+
Sbjct: 377 R 377
Score = 167 bits (424), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 107/176 (60%)
Query: 507 HKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI 566
++ YY K + R + Y+ + W L YYY GC SW W+YP+HYAP+ +D
Sbjct: 662 YRERYYRQKFGVELSDTKFRRSVVQAYVEGLCWVLAYYYQGCPSWKWFYPYHYAPFAADF 721
Query: 567 KDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
D +++ + EPF PF+QL+ VLPAASK LP P+Q LMT E S I+++YP EF+ D
Sbjct: 722 TDVQDMHIDFGESEPFRPFEQLMGVLPAASKSNLPVPFQQLMTNEESEIIDFYPNEFSID 781
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNL 682
+NGKK W+ V L+PFIDE +L+ A+ LTD+E RN G +++ + +L
Sbjct: 782 MNGKKMAWQGVALLPFIDENRLLHALHKRYAQLTDDEVRRNSFGRNVLFVSEDADL 837
>gi|6324622|ref|NP_014691.1| Rat1p [Saccharomyces cerevisiae S288c]
gi|417592|sp|Q02792.3|XRN2_YEAST RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Ribonucleic
acid-trafficking protein 1; AltName: Full=p116
gi|172365|gb|AAA34960.1| Rat1p [Saccharomyces cerevisiae]
gi|386005|gb|AAB26818.1| transcription activator [Saccharomyces cerevisiae]
gi|1420179|emb|CAA99240.1| RAT1 [Saccharomyces cerevisiae]
gi|285814937|tpg|DAA10830.1| TPA: Rat1p [Saccharomyces cerevisiae S288c]
Length = 1006
Score = 303 bits (777), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 181/461 (39%), Positives = 245/461 (53%), Gaps = 96/461 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ--------IP----------EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP + V E Q +P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSASNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +F Y + M +P+K+ MA+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENKPPP--ETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A++ E +A+E+ R E
Sbjct: 119 RSARDAQI-ENEAREEIMRQREEV------------------------------------ 141
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
E+++ + K K +DSN ITPGTPFM +L LRY+ K+ TD
Sbjct: 142 ------GEIIDDAVRNK-------KTWDSNAITPGTPFMDKLAAALRYWTAFKLATDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK++ VI+S PGEGEHKIM++IR ++ P+YNPN HC+YGLDADLI L
Sbjct: 187 -------GWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEV--KFNTKSNKGGSQIVTPEETKFFL-----------LHLSLMRD 329
GL THEP+F +LRE+V + N K N I EE K FL LH++++R+
Sbjct: 240 GLATHEPHFKILREDVFAQDNRKRNNLKDTINMTEEEKQFLQKQNSEQPFLWLHINVLRE 299
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YL E L PG L F F +E IDDWV M F GNDF+P+LP L + ++ +L ++
Sbjct: 300 YLSAE---LWVPG-LPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDILLDIW 355
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+ VLP L Y+ G LNL E L L S + + F+ ++
Sbjct: 356 KVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRH 396
Score = 183 bits (464), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLR-DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAP 561
E G H+ YY K E LR D +CYI + W L YYY GC SW+W+YP+HYAP
Sbjct: 601 EPGYHER-YYTAKFHVTPQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNWFYPYHYAP 659
Query: 562 YISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
+D FSHL +K+E G PFLP++QL++VLPAAS LP+ +++LM+ +S I+++YPE
Sbjct: 660 LATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKIFRSLMSEPDSEIIDFYPE 719
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG-PMLVYTYSNV 680
EF D+NGKK W+ + L+PFID+ +L+ A+ A LL+D ER+RN G P+L+ + N
Sbjct: 720 EFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAERARNIRGEPVLLISNKNA 779
Query: 681 N 681
N
Sbjct: 780 N 780
>gi|402589808|gb|EJW83739.1| hypothetical protein WUBG_05350 [Wuchereria bancrofti]
Length = 1134
Score = 303 bits (776), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 209/698 (29%), Positives = 363/698 (52%), Gaps = 34/698 (4%)
Query: 569 FSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLN 628
F+ + + +++ EPF PF+QLLAVLPAAS LP PY+ LM SPI+++YPE+F TDLN
Sbjct: 24 FAEMEMNFDLNEPFKPFEQLLAVLPAASANCLPPPYRELMNDAKSPIIDFYPEQFDTDLN 83
Query: 629 GKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY--SNVNLGTAL 686
GKK DWEAV+LIPFI+E +L++A+ + LLTDE+R RN HGP L+++Y S+ ++ +
Sbjct: 84 GKKNDWEAVILIPFINEDRLLQAVAIKDSLLTDEDRQRNVHGPHLLFSYDPSSSHILKST 143
Query: 687 APDYFPAINENHAVE-KPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKI 745
P FP I +N AV+ + + + + N++ GL V L + FPT+KH+ ++
Sbjct: 144 FPGTFPDI-QNCAVKIEEIEMNQFRISRNRIVHGLLPGVKLDVVFPGFPTMKHIPHIAEL 202
Query: 746 ENAKVKVFQQPSRNESIII-VQDKVQV-PSLKQVADQILGKTIFINYPHLIEIRVQAVAT 803
A +KVFQQPS+ +S+I+ + ++ ++ +K++A ++GK + +N+P L VQ + T
Sbjct: 203 LFADIKVFQQPSKKQSMILKIGNRPELEKDIKEIASDLVGKEVHVNWPMLQRALVQELWT 262
Query: 804 KDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVES- 862
+ S + + +++ Q+ ++ Y + G+D G + L +
Sbjct: 263 AHEKYSKTVDEKIICNVLSEEEQNVYKTYVSITRRNEYERRGIDAGQQKGLALVRIAHGL 322
Query: 863 RKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKTIDEIFYP-GCQCF--A 919
RKYF + + I + + S L +Q A E + E YP + F +
Sbjct: 323 RKYFEEKEAVIKRFYADIDNAIPI---SLSLVVQNALEDWDSGCFVEDLYPINAKVFISS 379
Query: 920 LSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLS--DLVHLQDDTVYNYLPSYTVASK 977
+ + +YG G + + +S KV DL+ D+V D+ + +Y +A
Sbjct: 380 VESKYYGFSGFIKENHLITKGTLTVSCKVSSVADLNFCDIVADYDNYALKWYTAYEIAKF 439
Query: 978 LSISPLLLSRFTGSIFI-------IDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETT 1030
L S +++R TG +++ + S + NIGL +KF+++N+ V FT R +
Sbjct: 440 LHTSVDVINRITGCVYVLLDECNAVPSKNTPLTKVNIGLELKFTKRNQIVPDFTCR-SSE 498
Query: 1031 KKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLR-DDVFPHQGEQRVAQIVSWLKE 1089
Y+ + +I+NY ++P VF +L+ + Y+ +FP ++ + + LK
Sbjct: 499 GHCLYSSKAFDIIRNYKMKYPSVFKYLEKLDNFQAYIHIKQIFPEFEQEELNTKLEELKT 558
Query: 1090 QPHA---KAEVRPCGAAVVDAKVVSLIEH----AVDTCEKVEKQITLFVKPNKLYIPKPT 1142
+ K + VD+ V+ IE + ++ L VKP L++ +
Sbjct: 559 FLNTITPKNALESADDVFVDSGVLKEIEKRTQIVISKHTPMQTYKRLAVKPRALFMAELC 618
Query: 1143 LDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHG 1202
PD +F L DRV+ ++ P G GT+IG++ T+ DV+FDKP+ G
Sbjct: 619 KGDSMPDARAEFCLLDRVICVKKLRMAPFGEFGTVIGLLN--TNSGKKIDVLFDKPYFGG 676
Query: 1203 VKIRCSESRGYRMPAQAMINLSYGERLCGNSNPHVKNI 1240
+R S++ G R+P ++IN++YG+R+ N P +++I
Sbjct: 677 QIMRSSKASGARLPMSSLINITYGKRM-RNEIPSIEHI 713
>gi|291242576|ref|XP_002741181.1| PREDICTED: 5-3 exoribonuclease 2-like [Saccoglossus kowalevskii]
Length = 965
Score = 303 bits (775), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 186/478 (38%), Positives = 246/478 (51%), Gaps = 114/478 (23%)
Query: 1 MGVPKFFRYISERYP-----CLSEVVREY---QIP-----------EFDNLYLDMNGIIH 41
MGVP FFR++S++YP C+ E +E Q+P EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCVEEKPKEVHGIQVPVNITEPNPNEIEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP +N P + E ++ IF I+ L R+++P++L +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCCHP-ENKPAPK-NEDEMMLAIFECIDRLMRIVRPRRLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEA---EVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQ 158
FR KE +V K KE+ ++ G P K
Sbjct: 119 FRGPKEVREKQVEIDKVKEE------------------------ILSRGGTLPPPK---- 150
Query: 159 RGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITT 218
P ++FDSNCITPGT FM RL LRY+V +I T
Sbjct: 151 -------------------------PVSEKFDSNCITPGTEFMFRLADCLRYYVTERIMT 185
Query: 219 DKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDAD 278
D W V VILS PGEGEHKIMDYIR + PD++PN HCL G DAD
Sbjct: 186 DP---------GWSKVKVILSDANVPGEGEHKIMDYIRKQRGSPDHDPNTHHCLCGADAD 236
Query: 279 LIMLGLCTHEPYFSLLREEVKFNT--------------KSNKGGS--------QIVTP-- 314
LIMLGL THEPYF+++REE K N K G + ++ P
Sbjct: 237 LIMLGLATHEPYFTIIREEFKPNAPRACELCGQYGHEMKECTGAAKEKEGEFDELTKPFV 296
Query: 315 EETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPD 374
+E +F L L+++R+YLE E P F F E IDDWV M F +GNDF+P+LP
Sbjct: 297 QEQEFIFLRLNILREYLEKELFMTGLP----FTFDFERAIDDWVFMCFFVGNDFLPHLPS 352
Query: 375 LHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L I GA+ L ++Y+ + GY+ + G +NL+R + +T L + F+++ +D
Sbjct: 353 LQIREGAIDRLIRIYKTAVFKTGGYLTKDGVVNLERVQMMMTDLGEMEDGIFKKRRSD 410
Score = 153 bits (387), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 102/164 (62%), Gaps = 1/164 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D ++ + ++ Y+ + W L YYY GC SW WY+P HYAP+ ++
Sbjct: 527 KDRYYKLKFDVSENDEQFVQSVVSSYVEGLCWVLRYYYQGCPSWKWYFPFHYAPFAANFI 586
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
D L +E G +PF P +QL+ V P+AS + LPE ++ LM+ +SPI+++YP++FA D
Sbjct: 587 DIGKLPNDFEKGTKPFKPLEQLMGVFPSASGQFLPETWRKLMSDPDSPIIDFYPDDFAID 646
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
LNGK+ W+ V L+PF+DE +L +A+ V LT EE RN G
Sbjct: 647 LNGKRYAWQGVALLPFVDEKRLKEALVGVYSDLTPEEIHRNGLG 690
>gi|399216467|emb|CCF73155.1| unnamed protein product [Babesia microti strain RI]
Length = 1209
Score = 302 bits (774), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 248/807 (30%), Positives = 356/807 (44%), Gaps = 181/807 (22%)
Query: 1 MGVPKFFRYISERYP---------------CLSEVVREYQIPEFDNLYLDMNGIIHNCSH 45
MGV FFRYI+ERYP LSE + +P FD LYLDMNGI+H C++
Sbjct: 1 MGVGHFFRYIAERYPLICQQISRSFSDNEAALSEFYSDSTLP-FDALYLDMNGIVHICAY 59
Query: 46 PNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 105
N + I+ IF YI + + +PKKL ++A+DGVAP+AKMNQQR RRFRS
Sbjct: 60 SNKEFSRDISSLGDIWLSIFQYITKIVNLAKPKKLLYLAVDGVAPKAKMNQQRTRRFRSV 119
Query: 106 KEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRS 165
E+E RA +N++ + F +
Sbjct: 120 AESE-----------------------------------------QRANLNEECAKYFAN 138
Query: 166 AKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
+ V R FD CITPGT FM Q+ +V I D
Sbjct: 139 GYDDPV----------RGKDGFVFDPTCITPGTKFMHEFTTQIEKYVAKMIKADT----- 183
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
W + VI+SG PGEGEHKI +YIR K + + HC+YGLDADLIML L
Sbjct: 184 ----YWSKLKVIVSGANVPGEGEHKIAEYIRNTKGQSIKS----HCIYGLDADLIMLSLL 235
Query: 286 THEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLS 345
HEP+ LLRE + F + + P++ F LLH+ ++R+YL E L +L
Sbjct: 236 FHEPHICLLRESIIFTNMMKNNITYRLLPKDDNFVLLHIRVLREYLARE---LLPVHMLK 292
Query: 346 FPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVL------PTLDGY 399
PF I IDD++L+ L+GNDF+P+L + I N L +L K+Y+E + P L
Sbjct: 293 EPF-ISRAIDDFILICLLVGNDFLPHLKFVQIPNRGLTILMKLYREHVGKNQKNPWL--- 348
Query: 400 INEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPD 459
+ G ++L+ F FL K + +Q EK D E P
Sbjct: 349 TIDCGEIDLRNFCNFLDKYCRVETKQILEKLRD--------------------PNEHKPT 388
Query: 460 LAALIKATDDDYDDGTEEVLNYANYEEYY--YSDEDEEWRTNFFSEFGQHKTDYYHYKLD 517
L D E+ +Y Y + + ++W + YY+ K+
Sbjct: 389 LI-------DTARHKIEK--DYTTYSRMFPKPATTPDQWASR-----------YYYAKMG 428
Query: 518 YAKVTNEVLRDQ-AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF------- 569
+T+E R++ + Y+ IQW L+YYY W+WY P Y P D+
Sbjct: 429 ---LTDEQSREEIVKQYLIGIQWVLYYYYRCVPDWNWYLPCPYPPLAQDMSKILKRTIQK 485
Query: 570 -------SHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
L +K+E+G P PF+QLL+VLP S LLP+ + L+T S + Y+P +
Sbjct: 486 TECKRLSKALGIKFELGHPCTPFEQLLSVLPPKSSYLLPKQLEALITDPKSGLESYFPTQ 545
Query: 623 FATDLNGKKQDWEAVVLIPFIDE--VKLIKAMDAVEHLLTDEERSRNRHG-PMLVYTYSN 679
F D++ W V L+P ID ++ I H L + RN G L++
Sbjct: 546 FDVDMDDTLVPWGGVTLLPTIDPTLIRQIIHNSLQCHPLDKADEQRNEFGQAHLIF---Q 602
Query: 680 VNLGTALAPDYF-PAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKH 738
N G + + P IN + N +R VN FP++
Sbjct: 603 CNSGKVIKRKFRNPGINGHFD--------------NTMRYVESSPVN----SFWFPSI-- 642
Query: 739 VQFTHKIENAK-VKVFQQPSRNESIII 764
Q H+ + +K V VF +PS++ES+ I
Sbjct: 643 AQLRHQFQFSKGVNVFSRPSQHESMYI 669
>gi|363753664|ref|XP_003647048.1| hypothetical protein Ecym_5486 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890684|gb|AET40231.1| hypothetical protein Ecym_5486 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1002
Score = 302 bits (773), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 181/462 (39%), Positives = 244/462 (52%), Gaps = 98/462 (21%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------------YQIP----EFDNLYLDMNGIIHN 42
MGVP FFR+IS +YP +S V+ E Y P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWISRKYPKIISPVLEETPQIVDGVKLPIDYSSPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP +N P TE Q+ ++F Y + M +P+++ +A+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHP-ENKPAPE-TEDQMLLEVFEYTNRVLNMARPRRVLMIAVDGVAPRAKMNQQRSRRF 118
Query: 103 RSAKEAEVL-EQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
RSA++A+ E+KA+ ER
Sbjct: 119 RSARDAKFANEEKARVLAER---------------------------------------- 138
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
E+++ K K +DSN ITPGTPFM +L LRY+ K+ TD
Sbjct: 139 ----EAYGELIDDSVKAK-------TTWDSNAITPGTPFMDKLAAALRYWTSFKLATDP- 186
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
WK + VI+S PGEGEHKIM++IR + YNPN HC+YGLDADLI
Sbjct: 187 --------GWKHLQVIISDATVPGEGEHKIMNFIRSQRVDSQYNPNTTHCIYGLDADLIF 238
Query: 282 LGLCTHEPYFSLLREEV--KFNTKSNKGGSQIVTPEETK-----------FFLLHLSLMR 328
LGL THEP+F +LRE+V + N + + I EE K F LH+S++R
Sbjct: 239 LGLATHEPHFKILREDVFAQDNRRRPRAQEMINMSEEDKQHLIEQDAEKPFLWLHVSVLR 298
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
+YL E + LSFPF +E IDDWV M F GNDF+P+LP L + ++ +L ++
Sbjct: 299 EYLAAELHVQR----LSFPFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDILVEI 354
Query: 389 YQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
++ VLP+L Y+ G LNL +K L +L S + E F+ K+
Sbjct: 355 WKTVLPSLKTYLTCDGELNLAGVQKVLEQLGSREPELFKRKH 396
Score = 174 bits (442), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 128/216 (59%), Gaps = 16/216 (7%)
Query: 511 YYHYKLDYAKVTNEVLR-DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF 569
YY K + LR D A CYI I W L YYY GC SW+WYYP+HYAP+ +D +
Sbjct: 593 YYQAKFHAPTKDIDSLRSDLARCYIEGIAWVLLYYYQGCPSWTWYYPYHYAPFAADFVNI 652
Query: 570 SHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNG 629
S L + +++G+PFLPF+QL+ VLPAAS LP+ ++ LM+ +S I++++PEEFA D+NG
Sbjct: 653 SDLVVSFDLGQPFLPFEQLMGVLPAASGHNLPDVFRPLMSDPDSEIIDFFPEEFAIDMNG 712
Query: 630 KKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN-RHGPMLVYTYSNVNLGTALAP 688
+K W+ + L+PFIDE +L A+ HLL+DEE++RN + +L+ + N+N L
Sbjct: 713 EKMAWKGIALLPFIDEQRLRTAVRKQYHLLSDEEKARNVQRNDVLIISNKNLNHENFLTK 772
Query: 689 DYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDV 724
Y + + +H + GLC V
Sbjct: 773 LYIDSASS--------------IHFKHFKTGLCGTV 794
>gi|70995976|ref|XP_752743.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus Af293]
gi|74630336|sp|Q8TFZ1.4|XRN2_ASPFU RecName: Full=5'-3' exoribonuclease 2
gi|44889966|emb|CAD29606.2| 5'->3'exoribonuclease, putative [Aspergillus fumigatus]
gi|66850378|gb|EAL90705.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus Af293]
gi|159131498|gb|EDP56611.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus A1163]
Length = 1058
Score = 301 bits (772), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/473 (36%), Positives = 248/473 (52%), Gaps = 105/473 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S V+ E +IP E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEELPYEVNGEEIPVDITKPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P E+++ +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPP--PANEQEMMVEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA ++A EK E R + +Q G
Sbjct: 119 FRSAQEA----KEADEKKEEF-----------------------------RKMLAKQNGN 145
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ + EV+ +K +DSN ITPGTPFM L LRY++ K+ TD
Sbjct: 146 KVDEELQEEVV-------------KKTWDSNVITPGTPFMDILAASLRYWIAYKLNTDP- 191
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + +I+S PGEGEHKIM++IR ++ P+++PN RH +YGLDADLIM
Sbjct: 192 --------AWEKLKIIISDATVPGEGEHKIMEFIRSQRAAPEHDPNTRHVIYGLDADLIM 243
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKG----GSQIVTPEETK------------------- 318
LGL THEP+F +LRE+V F + G Q EE +
Sbjct: 244 LGLATHEPHFRVLREDVFFQESRARTCHLCGQQGHKAEECRGQAKEKNGEFDEKQKGSSL 303
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F LH+S++R+YL E +P FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 304 KPFIWLHVSILREYLAAELYVPHQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLD 359
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I + L ++++ +P + GY+ E G+++LKR + L LA + FR +
Sbjct: 360 IRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAIFRRR 412
Score = 161 bits (408), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 102/160 (63%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 608 YYEQKFGVDPQDKEFRHKVARAYAEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDIG 667
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ + ++ G PF PF+QL+ VLPA+S +P+ + +LM+ +S I+++YPE+FA DLNGK
Sbjct: 668 DMEITFDKGVPFKPFEQLMGVLPASSNHAIPKVFHDLMSSPDSEIIDFYPEDFAVDLNGK 727
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V+L+PFIDE +L+ AM+ LLT++E+ RN G
Sbjct: 728 KFAWQGVILLPFIDEKRLLAAMEKKYPLLTEDEKLRNSVG 767
>gi|50293593|ref|XP_449208.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608566|sp|Q6FKN6.3|XRN2_CANGA RecName: Full=5'-3' exoribonuclease 2
gi|49528521|emb|CAG62182.1| unnamed protein product [Candida glabrata]
Length = 1018
Score = 301 bits (772), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/461 (38%), Positives = 248/461 (53%), Gaps = 96/461 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQ-------IP----------EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP +S V+ E Q +P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEPQQLVDGVALPIDYAGPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE + +F Y + M +P+K+ +A+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENKPPP--ETEDDMLLAVFEYTNRVLNMARPRKVLVIAVDGVAPRAKMNQQRSRRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++AE+ E +A+E+ R +Q G
Sbjct: 119 RSARDAEI-ENEAREEIMR---------------------------------QKEQLG-- 142
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
++++ K K K +DSN ITPGTPFM +L LRY+ K+ TD
Sbjct: 143 -------QIIDDSVKNK-------KTWDSNAITPGTPFMDKLAIALRYWTAFKLATDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK++ VI+S PGEGEHKIM++IR ++ P+YNPN HC+YGLDADLI L
Sbjct: 187 -------GWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEV--KFNTKSNKGGSQIVTPEETK-----------FFLLHLSLMRD 329
GL THEP+F +LRE+V + N K N I +E K F LH+S++R+
Sbjct: 240 GLATHEPHFKILREDVFAQDNRKRNNVKDTIDMTDEEKDLIRKQDSEKPFLWLHISVLRE 299
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YL E K P FPF +E IDDWV M F GNDF+P+LP L + ++ +L ++
Sbjct: 300 YLSAELWTPKLP----FPFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDILLDIW 355
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+ +LP L Y+ G LNL+ E L +L + + + F+ ++
Sbjct: 356 KSILPRLKTYMTCDGKLNLESVEMVLKELGNREGDIFKTRH 396
Score = 179 bits (455), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
+CYI + W L YYY GC SW+WYYP+HYAP D DF L++K+E+GEPFLP++QL+
Sbjct: 628 VKCYIEGVSWVLMYYYQGCASWTWYYPYHYAPLAEDFVDFHDLDIKFELGEPFLPYEQLM 687
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
+VLPAAS LPE ++ LM+ E+S I+++YP EF D+NGKK W+ + L+PFIDE +L+
Sbjct: 688 SVLPAASGHNLPEVFRPLMSSEDSEIIDFYPTEFPIDMNGKKMSWQGIALLPFIDETRLL 747
Query: 650 KAMDAVEHLLTDEERSRN-RHGPMLVYTYSNVN 681
A L+++E+ RN R+ P+L+ + NVN
Sbjct: 748 TATRNQYKFLSEDEKRRNTRNDPVLLISNKNVN 780
>gi|149236630|ref|XP_001524192.1| 5'-3' exoribonuclease 2 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451727|gb|EDK45983.1| 5'-3' exoribonuclease 2 [Lodderomyces elongisporus NRRL YB-4239]
Length = 1049
Score = 301 bits (771), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 178/459 (38%), Positives = 247/459 (53%), Gaps = 97/459 (21%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE---------YQIP----EFDNLYLDMNGIIHNCSHP 46
MGVP FR++S +YP +S VV E Y+ P E DNLYLDMNGI+H CSHP
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEEDQNEIGGAKYEDPNPNGEIDNLYLDMNGIVHPCSHP 60
Query: 47 NDNDPHFRI--TEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
H + TE ++F DIF Y + + M +P+K+ +A+DGVAPRAKMNQQR RRFRS
Sbjct: 61 E----HKKAPETEDEMFLDIFTYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFRS 116
Query: 105 AKEAEVLEQK-AKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRF 163
A++A++ ++ AKE + + F
Sbjct: 117 AQDAKIKDEAIAKEIAD----------------------------------------KEF 136
Query: 164 RSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWK 223
R E+++ K K K +DSN ITPGTPFM RL + LRY V K+ D
Sbjct: 137 R----GELIDNAVKVK-------KLWDSNAITPGTPFMDRLAEALRYLVAYKLANDP--- 182
Query: 224 DTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLG 283
W ++ VI+S PGEGEHK+M +IR +S P Y+PN +HC+YGLDADLI LG
Sbjct: 183 ------GWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYDPNTKHCIYGLDADLIFLG 236
Query: 284 LCTHEPYFSLLREEVKFNTKS----------NKGGSQIVTPEETK--FFLLHLSLMRDYL 331
L THEP+F +LRE+V N + NK + ++ + K F LH++++R+YL
Sbjct: 237 LATHEPHFRVLREDVFANQEKRMTISDHVAMNKDQADLIEERDRKKPFLWLHVNVLREYL 296
Query: 332 ELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQE 391
+E L P +SFPF +E IDDWV + F GNDF+P+LP L + + + L ++
Sbjct: 297 AVE---LHNPN-MSFPFDLERAIDDWVFICFFAGNDFLPHLPSLDVRDNGIDTLVNCWKR 352
Query: 392 VLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+P L Y+ G LNL E + LA + E FR ++
Sbjct: 353 CVPRLRDYVTSDGKLNLDSVEVLMADLAIKEDEIFRNRF 391
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 110/171 (64%), Gaps = 4/171 (2%)
Query: 524 EVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHL---NLKYEMGE 580
E R+ YI I W YYY GC SW+W+YP+HYAP+ +D+ + L +K+E+G+
Sbjct: 579 ETRRNVVRSYIEGISWVALYYYQGCPSWTWFYPYHYAPFAADMTNLRDLFPEGVKFELGK 638
Query: 581 PFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLI 640
PF P++QL++VLPAASK LP+ + LMT S ++++YPE+F D+NGKK W+ + L+
Sbjct: 639 PFRPYEQLMSVLPAASKHALPDAFHGLMTDPKSEVIDFYPEDFEIDMNGKKMSWQGIPLL 698
Query: 641 PFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYF 691
PFI+E +L+KA+ A L++ E SRN + ++ SN N AL + F
Sbjct: 699 PFIEEERLLKAVQAKYSELSEYELSRNVNKEAELFI-SNQNKNYALFKEEF 748
>gi|119495190|ref|XP_001264385.1| 5'->3' exoribonculease Dhp1 [Neosartorya fischeri NRRL 181]
gi|119412547|gb|EAW22488.1| 5'->3' exoribonculease Dhp1 [Neosartorya fischeri NRRL 181]
Length = 1057
Score = 301 bits (771), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/473 (36%), Positives = 249/473 (52%), Gaps = 105/473 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE--YQI----------------PEFDNLYLDMNGIIH 41
MGVP FR++S +YP +S V+ E Y+I E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEELPYEINGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P E+++ +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPP--PANEQEMMVEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA ++A EK E R + +Q G
Sbjct: 119 FRSAQEA----KEADEKKEEF-----------------------------RKMLAKQNGN 145
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ + EV+ +K +DSN ITPGTPFM L LRY++ K+ TD
Sbjct: 146 KVDEELQEEVV-------------KKTWDSNVITPGTPFMDILAASLRYWIAYKLNTDP- 191
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + +I+S PGEGEHKIM++IR ++ P+++PN RH +YGLDADLIM
Sbjct: 192 --------AWEKLKIIISDATVPGEGEHKIMEFIRSQRAAPEHDPNTRHVIYGLDADLIM 243
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKG----GSQIVTPEETK------------------- 318
LGL THEP+F +LRE+V F + G Q EE +
Sbjct: 244 LGLATHEPHFRVLREDVFFQESRARTCHLCGQQGHKAEECRGQAKEKNGEFDEKQKGSSL 303
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F LH+S++R+YL E ++ SFPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 304 KPFIWLHVSILREYLAAELYVPQQ----SFPFDLERALDDWVFMCFFVGNDFLPHLPSLD 359
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I + L ++++ +P + GY+ E G+++LKR + L LA + FR +
Sbjct: 360 IRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAIFRRR 412
Score = 162 bits (410), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 101/160 (63%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 606 YYEQKFGVDPQDKEFRHKVARAYAEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDIG 665
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ + ++ G PF PF+QL+ VLPA+S +PE + +LM+ S I+++YPE+FA DLNGK
Sbjct: 666 DMEINFDKGVPFKPFEQLMGVLPASSNHAIPEVFHDLMSNPESEIIDFYPEDFAVDLNGK 725
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V+L+PFIDE +L+ AM+ LLT++E+ RN G
Sbjct: 726 KFAWQGVILLPFIDEKRLLAAMEKKYPLLTEDEKLRNSVG 765
>gi|50310793|ref|XP_455419.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74605300|sp|Q6CKX0.3|XRN2_KLULA RecName: Full=5'-3' exoribonuclease 2
gi|49644555|emb|CAG98127.1| KLLA0F07469p [Kluyveromyces lactis]
Length = 992
Score = 301 bits (771), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 182/461 (39%), Positives = 247/461 (53%), Gaps = 96/461 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP----------EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP +S V+ EY Q+P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEYPVIEDGVQLPLDYSSANPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +F Y + M +P+K+ +A+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENKPPP--ETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A+ L+ +A+E+ R +R D+
Sbjct: 119 RSARDAK-LQNEAREQVLR----EREDY-------------------------------- 141
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
E +++ K K K +DSN ITPGTPFM +L LRY+ K+ TD
Sbjct: 142 ------GETIDENVKSK-------KTWDSNAITPGTPFMDKLATALRYWTSFKLATDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK++ +I+S PGEGEHKIM++IR ++ YNPN HC+YGLDADLI L
Sbjct: 187 -------GWKNLQIIISDATVPGEGEHKIMNFIRSQRADTQYNPNTTHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEVKFNTKSNKGGSQ--IVTPEETK-----------FFLLHLSLMRD 329
GL THEP+F +LRE+V N K Q I EE K F LH+S++R+
Sbjct: 240 GLATHEPHFKILREDVFANNNYKKPKPQDMINLSEEEKQQLIQQDSEKPFLWLHISVLRE 299
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YL E L P LSF F E IDDWV M F GNDF+P+LP L + ++ +L ++
Sbjct: 300 YLSAE---LAIPH-LSFQFDFERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDILVDIW 355
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+ VLP Y+ G LNL+ E L +L + + F++KY
Sbjct: 356 KTVLPKTKTYLTCDGTLNLEPVEALLEQLGDRETDLFKKKY 396
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 124/195 (63%), Gaps = 6/195 (3%)
Query: 489 YSDEDEEWRTNFFSEFGQHKTDYYHYKLDY-AKVTNEVLRDQAECYIRAIQWNLHYYYNG 547
+ D DE R E G H YY +K AK + +D CY+ I W L YYY G
Sbjct: 581 FIDTDESVR---LYEPGYHDR-YYQHKFHVPAKDIPALQKDVIRCYVEGISWVLLYYYQG 636
Query: 548 CVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNL 607
C SW+WYYP+HYAP+ D K+ +L++ +++GEPFLP++QL++VLPAAS LPE ++ L
Sbjct: 637 CASWTWYYPYHYAPFAQDFKNIKNLDIHFDLGEPFLPYEQLMSVLPAASGHALPEIFRPL 696
Query: 608 MTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
M+ NS I+++YPEEF D+NGKK W+ + L+PFIDE +L+K + L+D E++RN
Sbjct: 697 MSDPNSEIIDFYPEEFPVDMNGKKMAWQGIALLPFIDETRLLKTVREQYSKLSDSEKARN 756
Query: 668 -RHGPMLVYTYSNVN 681
R L+ + NVN
Sbjct: 757 VRKKDALLISNKNVN 771
>gi|281202869|gb|EFA77071.1| 5'-3' exoribonuclease [Polysphondylium pallidum PN500]
Length = 1091
Score = 301 bits (771), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 186/452 (41%), Positives = 248/452 (54%), Gaps = 98/452 (21%)
Query: 1 MGVPKFFRYISERYPCL------------SEVVREYQIP----EFDNLYLDMNGIIHNCS 44
MG+P FFR++ ++Y + S VV + P EFDNLYLDMNGIIH C+
Sbjct: 1 MGIPAFFRWMVDKYNGIIVPTKEPRHQDGSRVVCDNSEPNLNGEFDNLYLDMNGIIHPCA 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
HP + P R T+ + I Y++++F +++P+ L +MAIDGVAPRAKMNQQR RRFRS
Sbjct: 61 HP-EQGPKPRNTQ-DMMDSIMEYLDLVFAIVRPRNLLYMAIDGVAPRAKMNQQRSRRFRS 118
Query: 105 AKEAEVL-EQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRF 163
A +A + E++AKE E + K
Sbjct: 119 ALDARLTREKEAKELMENIANGK------------------------------------- 141
Query: 164 RSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWK 223
S E E L QKAK++ + FDSNCITPGT FM + LR +V K++TD
Sbjct: 142 MSESEVEAL-QKAKDE------KFHFDSNCITPGTMFMDLVALTLRSYVAEKVSTDP--- 191
Query: 224 DTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLG 283
WK++ VI+S PGEGEHKIMDYIR +++ DYNPN ++ +YGLDADLIML
Sbjct: 192 ------AWKNLKVIISDASIPGEGEHKIMDYIRKQRAQKDYNPNQKNVIYGLDADLIMLA 245
Query: 284 LCTHEPYFSLLREEVKFNTKSNKGGSQIVTP----------EETKFF------LLHLSLM 327
L THEP F +LRE V+ KG Q TP EE K F LL L+L
Sbjct: 246 LATHEPNFEILREFVQ-----TKGRKQQSTPKEMQGGDDGEEEKKDFLTKDYQLLSLNLF 300
Query: 328 RDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYK 387
RDYL+ E +F F IE +IDD++L+ F +GNDF+P+LP L I GA+ + K
Sbjct: 301 RDYLDSEL-----KCSPAFGFDIERVIDDFILICFFVGNDFLPHLPSLQINEGAIDRIMK 355
Query: 388 VYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
+Y+++LPT D Y+ E G ++ R K KLA
Sbjct: 356 IYKDLLPTFDDYLTEDGEFSIDRVGKIFAKLA 387
Score = 157 bits (396), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 127/226 (56%), Gaps = 14/226 (6%)
Query: 505 GQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYIS 564
G + Y H+ AK + V+ + YI + W L YYY GC SW WYYP+HYAP+I
Sbjct: 581 GWRERYYNHHFESEAKEDDNVVLHVCQSYIDGLAWVLKYYYKGCASWGWYYPYHYAPFII 640
Query: 565 DIKDFSHL--NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLEN-----SPILE 617
DI + L +++G PF PF+QL++VLP S + +P+PYQ +M +++ SPI+
Sbjct: 641 DISENIELIKPATFDLGSPFRPFEQLMSVLPKESGQFVPKPYQKMMGIDDGSGDVSPIIH 700
Query: 618 YYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
+YP F D+ + W+ V L+PFIDE +L+ ++ ++E+ LTDEE+ RN G L+
Sbjct: 701 FYPSNFMIDVQPSQPIWKGVCLLPFIDEKELLSSLKSLENKLTDEEKFRNSQGAELLI-- 758
Query: 678 SNVNLGTALAPDYFPAINENHAVE---KPLYRDDIYVHPNKLRKGL 720
VN L D A ++ +++ P + DI P ++ K L
Sbjct: 759 --VNKDLKLTNDENAADKDHSSIDSKVSPNFLGDISKLPERITKKL 802
>gi|407036374|gb|EKE38129.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 572
Score = 301 bits (770), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 214/638 (33%), Positives = 316/638 (49%), Gaps = 111/638 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S+++P + + + F Y D+N +P+F E
Sbjct: 1 MGVPSFFRWLSQKFPKIIDGCQ----GSFHEQYNDLN------------EPNFNGVEYDN 44
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F ++ ++G+ Q R + E +E G
Sbjct: 45 F--------------------YIDMNGLIHPCFHPQDR-------QSPETIEDMMVMLGR 77
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
L D++ + P+KL ++A+DGVAPRAKMNQQR RRF+SAK+AE E K E+
Sbjct: 78 YL------DYL-IDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFKSAKDAENAELKHAEEN 130
Query: 181 E--------RLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWK 232
+P K DSNCITPGT FM + + L+ ++K +++ W
Sbjct: 131 RNKVMNGLPEVPYIKPLDSNCITPGTEFMSVVSKTLKKYIKERMSQSSYWNK-------- 182
Query: 233 DVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFS 292
+ VILS PGEGEHKIMD+IR K PDYNPN HC+YGLDADLIML L THE +FS
Sbjct: 183 -LVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNTHHCMYGLDADLIMLSLATHERFFS 241
Query: 293 LLREEVKFNTKSNKGGSQIVTPEE-------------TK-FFLLHLSLMRDYLELEFGKL 338
++RE+V F + + I +P++ TK F LH ++R YL++ L
Sbjct: 242 IIREKVFFEQEQCYICNDIHSPDKCPHRKDIGAMDTITKPFQFLHCHILRGYLQI---TL 298
Query: 339 KEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDG 398
K G F E +DD++ FL+GNDF+P++P L I +GA+ LL KVY+E LP G
Sbjct: 299 KVEG-----FEFERCVDDFIFFCFLVGNDFLPHIPSLDIRDGAVDLLMKVYREFLPH-GG 352
Query: 399 YINEGGYLNLKRFEKFLTKLASFDFEQFREKY-ADIQYLEGKMGKKFSDVFHKEKSKEMD 457
YI E G LN+ + FL ++ + +K + Y + ++ + D+ + K+ +
Sbjct: 353 YITESGSLNVTNAKNFLQEVGKEEPAILEKKCQKEKNYAKRRLDNQIRDL----EIKKAN 408
Query: 458 PDLAALIKATD--DDYDDGTEEVLNYANYEEYYYSDEDEEWRTNF----------FSEFG 505
+ +K+T+ + +E L E DE+ + R +F E G
Sbjct: 409 VYENSTLKSTESINTLTPEQQEQLKTQEAEIKKIEDEERKLRADFEQKELTDEVKLGEPG 468
Query: 506 QHKTDYYHYKLDY-AKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYIS 564
+ YY K K + +RD Y + W L YYY GC SW WYYP+ YAP+
Sbjct: 469 -YTQRYYSVKFKINPKQDTQKIRDIVHSYFEGMNWVLGYYYKGCQSWDWYYPYLYAPFAE 527
Query: 565 DIKDFSHLN--LKYEMGEPFLPFQQLLAVLPAASKELL 600
D+ ++ N +KY+ PF PF+QL++VLP SK L+
Sbjct: 528 DMGEYVDYNFEIKYKESTPFRPFEQLMSVLPPRSKSLI 565
>gi|121701237|ref|XP_001268883.1| 5'->3' exoribonculease Dhp1 [Aspergillus clavatus NRRL 1]
gi|119397026|gb|EAW07457.1| 5'->3' exoribonculease Dhp1 [Aspergillus clavatus NRRL 1]
Length = 1043
Score = 301 bits (770), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 182/516 (35%), Positives = 267/516 (51%), Gaps = 111/516 (21%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S V+ E +IP E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISSVIEELPYEVNGEEIPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P E+++ +IF Y + + M++P+K+ +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPPP--ANEQEMMVEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRARR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA ++A EK E R + +Q G
Sbjct: 119 FRSAQEA----READEKKEEF-----------------------------RKMLAKQNGN 145
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ EV+ +K +DSN ITPGTPFM L LRY++ K+ TD
Sbjct: 146 KADQELHEEVI-------------QKTWDSNVITPGTPFMDILAASLRYWIAYKLNTDP- 191
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + +I+S PGEGEHKIM+++R ++ P+++PN RH +YGLDADLIM
Sbjct: 192 --------AWEKLKIIISDATVPGEGEHKIMEFVRSQRAAPEHDPNTRHVIYGLDADLIM 243
Query: 282 LGLCTHEPYFSLLREEVKFNTK----SNKGGSQIVTPEETK------------------- 318
LGL THEP+F +LRE+V F N G EE +
Sbjct: 244 LGLATHEPHFRVLREDVFFQESRPRTCNLCGQPGHKAEECRGQAKEKNGEFDEKQKGSSL 303
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F LH+S++R+YL E ++P FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 304 KPFIWLHVSVLREYLAAELYVPQQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLD 359
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL 436
I + L ++++ +P + GY+ E G+++LKR + L LA + FR + Q
Sbjct: 360 IRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAIFRRRR---QAE 416
Query: 437 EGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYD 472
E K+ ++ K+++K + D A+ + + +YD
Sbjct: 417 ERKLA---NEKRRKQEAKAREEDRASKRRRSSPNYD 449
Score = 161 bits (408), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 102/160 (63%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y + W L YY+ GC SW+WY+P+HYAP+ +D D
Sbjct: 602 YYAQKFGVGPEDKEFRHKVARAYAEGLAWVLLYYFQGCPSWTWYFPYHYAPFAADFVDIG 661
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ + ++ G PF PF+QL+ VLPA+S +PE + +LM+ +S I+++YPE+FA DLNGK
Sbjct: 662 DMEISFDKGIPFRPFEQLMGVLPASSNHAIPEVFHDLMSNPSSEIIDFYPEDFAVDLNGK 721
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V+L+PFIDE +L+ AM+ LL+++E+ RN G
Sbjct: 722 KFAWQGVILLPFIDERRLLAAMEKKYPLLSEDEKLRNSVG 761
>gi|255717294|ref|XP_002554928.1| KLTH0F17116p [Lachancea thermotolerans]
gi|238936311|emb|CAR24491.1| KLTH0F17116p [Lachancea thermotolerans CBS 6340]
Length = 982
Score = 301 bits (770), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 172/461 (37%), Positives = 242/461 (52%), Gaps = 96/461 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE--------------YQIP----EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP + V E Y P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEDTPQIEDGVALPIDYAGPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +F Y + M +P+K+ +A+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENRPPP--ETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A++ E+ ER+ EK
Sbjct: 119 RSARDAQI----QNEERERVLLEKE----------------------------------- 139
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
E+++ + K K +DSN ITPGTPFM +L LRY+ K+ TD
Sbjct: 140 ----DMGEIIDDSVRNK-------KTWDSNAITPGTPFMDKLAAALRYWTSFKLATDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK++ VI+S PGEGEHKIM+++R ++ P YNPN HC+YGLDADLI L
Sbjct: 187 -------GWKNLQVIISDATVPGEGEHKIMNFVRSQRADPQYNPNTSHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEV--KFNTKSNKGGSQIVTPEETK-----------FFLLHLSLMRD 329
GL THEP+F +LRE+V + N + + I EE K F LH+S++R+
Sbjct: 240 GLATHEPHFKILREDVFAQDNRRRQRVQDTINMSEEDKAALLQQDSQKPFLWLHISVLRE 299
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YL +E + LSF F E +DDWV M F GNDF+P+LP L + ++ +L +++
Sbjct: 300 YLAVELFVPR----LSFEFDTERAVDDWVFMCFFCGNDFLPHLPSLDVRENSIDILVEIW 355
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+ +LP L Y+ G LNL E L L + + + F++++
Sbjct: 356 KTILPRLKTYMTCDGELNLDSVELLLQHLGAREPQMFKDRF 396
Score = 170 bits (431), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 122/197 (61%), Gaps = 14/197 (7%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKL-----DYAKVTNEVLRDQAECYIRAIQWNLHYYY 545
D DEE + E G H YY K D ++ EV+R Y+ + W L YYY
Sbjct: 586 DTDEEVK---LFEPGYHDR-YYTAKFHIDERDIDQLRKEVVR----SYVEGVSWVLLYYY 637
Query: 546 NGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQ 605
GC SW+WYYP+HYAP+ SD KD L + +E GEPFLPF+QL++VLPAAS LP ++
Sbjct: 638 QGCASWNWYYPYHYAPFASDFKDIKDLKITFEKGEPFLPFEQLMSVLPAASGHNLPSIFR 697
Query: 606 NLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERS 665
LM+ +S I+++YPEEF D+NGKK W+ + L+PFIDE +L++ + L+ EE++
Sbjct: 698 PLMSEPDSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDEKRLLRVVRDQYERLSPEEKA 757
Query: 666 RN-RHGPMLVYTYSNVN 681
RN R +L+ + NVN
Sbjct: 758 RNVRKQEVLLISNKNVN 774
>gi|302309530|ref|NP_986969.2| AGR303Wp [Ashbya gossypii ATCC 10895]
gi|442570294|sp|Q74ZA0.4|XRN2_ASHGO RecName: Full=5'-3' exoribonuclease 2
gi|299788402|gb|AAS54793.2| AGR303Wp [Ashbya gossypii ATCC 10895]
gi|374110220|gb|AEY99125.1| FAGR303Wp [Ashbya gossypii FDAG1]
Length = 945
Score = 301 bits (770), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 174/462 (37%), Positives = 244/462 (52%), Gaps = 98/462 (21%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP----------EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP + +VV ++P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVIEDTPQVVDGVKLPIDYSAANPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP +N P TE ++ +F Y + M +P+K+ +A+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHP-ENKPAPE-TEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRSRRF 118
Query: 103 RSAKEAEVL-EQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
RSA++A++ E+KA+ ER
Sbjct: 119 RSARDAKLANEEKARVLAER---------------------------------------- 138
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
E+++ K K K +D+N ITPGTPFM +L LRY+ K+ TD
Sbjct: 139 ----EAYGEMIDDAVKAK-------KSWDTNAITPGTPFMDKLAAALRYWTSFKLATDP- 186
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
WK++ VI+S PGEGEHKIM++IR ++ YNPN HC+YGLDADLI
Sbjct: 187 --------GWKNLQVIISDATVPGEGEHKIMNFIRSQRADVQYNPNTTHCIYGLDADLIF 238
Query: 282 LGLCTHEPYFSLLREEV-------------KFNTKSNKGGSQIVTPEETKFFLLHLSLMR 328
LGL THEP+F +LRE+V + + + + I E F LH+S++R
Sbjct: 239 LGLATHEPHFKILREDVFAQDNRRRPRQHDMMDMSAEEKQALIEQDAEKPFLWLHVSVLR 298
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
+YL E + P F F +E IDDWV M F GNDF+P+LP L + ++ +L +
Sbjct: 299 EYLSAELLVPRLP----FHFDLERAIDDWVFMCFFCGNDFLPHLPSLDVRENSIDILVDI 354
Query: 389 YQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
++ VLP+L Y+ G LNLK EK L +L + + + F++KY
Sbjct: 355 WKAVLPSLKTYLTCDGKLNLKGVEKVLAQLGNRESDIFKKKY 396
Score = 167 bits (424), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 117/179 (65%), Gaps = 2/179 (1%)
Query: 511 YYHYKLDYAKVTNEVLRDQA-ECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF 569
YY K + + LR + Y+ I W L YYY GC SW+WYYP+HYAP+ SD
Sbjct: 594 YYQAKFHVPTGSIDALRKKVVRSYVEGISWVLLYYYQGCPSWTWYYPYHYAPFASDFTGI 653
Query: 570 SHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNG 629
S L++ +++GEPFLP++QL++VLPAAS LP+ +++LM+ S I ++YPEEF D+NG
Sbjct: 654 SDLSVTFDLGEPFLPYEQLMSVLPAASSHNLPDVFRSLMSDPESEIYDFYPEEFPIDMNG 713
Query: 630 KKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN-RHGPMLVYTYSNVNLGTALA 687
+K W+A+VL+PFIDE +L+ A+ LL++ ER+RN R +L+ + N + LA
Sbjct: 714 EKMAWKALVLLPFIDETRLLAAVRQKYPLLSEAERARNVRRDEVLLISNKNTHYERFLA 772
>gi|169606446|ref|XP_001796643.1| hypothetical protein SNOG_06264 [Phaeosphaeria nodorum SN15]
gi|160706992|gb|EAT86095.2| hypothetical protein SNOG_06264 [Phaeosphaeria nodorum SN15]
Length = 1021
Score = 301 bits (770), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 174/478 (36%), Positives = 256/478 (53%), Gaps = 109/478 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ--------IP-----------EFDNLYLDMNGIIH 41
MGVP FR++S++YP + V+E Q IP EFDNLYLDMNGI+H
Sbjct: 1 MGVPAMFRWLSQKYPKIVSTVQEEQPKKVGDEVIPVDRTGPNPNGEEFDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
CSHP D P + TE + IF Y + + M++P+KL +MA+DGVAPRAKMNQQR RR
Sbjct: 61 PCSHPEDK-PAPK-TEADMMMAIFEYTDRVVGMVRPRKLLYMAVDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FR+A+E AKEK E+R +F+ + +N Q+
Sbjct: 119 FRAARE-------AKEK-----DEERAEFLKM---------------------LNSQKAS 145
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
R E + EK +DSN ITPGTPFM L + L+Y+ K TTD
Sbjct: 146 RGEDINSLEEV------------VEKTWDSNAITPGTPFMHLLAESLQYWCAYKFTTDP- 192
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
WKD+ VI+S PGEGEHKIM+++R ++ P ++PN RH +YGLDADLIM
Sbjct: 193 --------SWKDMKVIISDASVPGEGEHKIMNFVRSQRAIPTHDPNTRHVIYGLDADLIM 244
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKGGSQIVT----------PEETK------------- 318
L L THEP+F +LRE+V F++ +K ++ P++ K
Sbjct: 245 LSLATHEPHFRVLREDVFFDSGKDKACTRCGRKGHIRNNCEFPDDGKKLTEEEAAEEWAA 304
Query: 319 -------FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPN 371
+ LH +++R+YL +E K F + +E +DDWV M F +GNDF+P+
Sbjct: 305 SEHPPKPYIWLHTNILREYLAVEMETPKR----RFKYDLERSLDDWVFMCFFVGNDFLPH 360
Query: 372 LPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
LP L I + + LL +++++ +D Y+ + G+ +++R ++ L LAS + + F+++
Sbjct: 361 LPSLEIRDQGIDLLISIWRDLAAEMDDYVTKDGFPDMRRVQQILGALASREADIFKKR 418
Score = 73.6 bits (179), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 496 WRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYY 555
W + + + K +H D N+V R AE + W L YY GC SW+WY+
Sbjct: 560 WEDGYEERYYEQK---FHVAPDDIAFRNKVARQYAE----GLCWVLAYYMQGCPSWTWYF 612
Query: 556 PHHYAPYISDIKDFSHLNLK--YEMGEPFLPFQQLLAVLPAASKELL 600
PHHYAP+ +D ++ + +E G PF P++QL+ + SK LL
Sbjct: 613 PHHYAPFAADFVGLEDMDPRKLFEKGTPFHPYEQLMVLPFIDSKRLL 659
>gi|358372009|dbj|GAA88615.1| 5'->3' exoribonculease Dhp1 [Aspergillus kawachii IFO 4308]
Length = 1045
Score = 300 bits (768), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 172/463 (37%), Positives = 248/463 (53%), Gaps = 105/463 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S V+ E+ ++P E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEFPQEINGEEVPVDTTRPNPNGDEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P E+++ +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPPP--SNEQEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA ++A EK E R + +Q G+
Sbjct: 119 FRSAQEA----READEKKEEF-----------------------------RKMLERQNGK 145
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
KE E ++++ +K +DSN ITPGTPFM L LRY++ K+ TD
Sbjct: 146 -----KEDEDMQEQV--------IQKTWDSNVITPGTPFMDILAAALRYWIAYKLNTDP- 191
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + +I+S PGEGEHKIM+++R ++ P+++PN RH +YGLDADLIM
Sbjct: 192 --------AWEKLKIIISDATVPGEGEHKIMEFVRSQRASPEHDPNTRHVIYGLDADLIM 243
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKG----GSQIVTPEETK------------------- 318
LGL THEPYF +LRE+V F + G EE K
Sbjct: 244 LGLATHEPYFRVLREDVFFQESRARTCRLCGQAGHKAEECKGQAKEKNGQFDEKGKGTSL 303
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F L++S++R+YL E ++P FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 304 KPFIWLNVSILREYLAAELYVPQQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLD 359
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
I + L ++++ +P + GY+ E G+++LKR + L LA
Sbjct: 360 IRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLA 402
Score = 166 bits (419), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 101/157 (64%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 603 YYEQKFGVDPEDKEFRHKVARAYAEGLAWVLRYYFQGCPSWTWYYPYHYAPFAADFVDIG 662
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ L++E G PF PF+QL+ VLPA+S +PE + +LM+ +S I+++YPE+F DLNGK
Sbjct: 663 EMELQFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMSDPDSEIIDFYPEDFPVDLNGK 722
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
K W+ VVL+PFIDE +L+ AM+ LL+D+E+ RN
Sbjct: 723 KFAWQGVVLLPFIDEKRLLAAMEKKYPLLSDDEKLRN 759
>gi|145240295|ref|XP_001392794.1| 5'-3' exoribonuclease 2 [Aspergillus niger CBS 513.88]
gi|134077309|emb|CAK45649.1| unnamed protein product [Aspergillus niger]
Length = 1045
Score = 300 bits (767), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 172/463 (37%), Positives = 247/463 (53%), Gaps = 105/463 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S V+ E+ ++P E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEFPQEINGEEVPVDTTRPNPNGDEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P E+++ +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPP--PANEQEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA ++A EK E R + +Q G+
Sbjct: 119 FRSAQEA----READEKKEEF-----------------------------RKMLEKQNGK 145
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
KE E +++ +K +DSN ITPGTPFM L LRY++ K+ TD
Sbjct: 146 -----KEDEDMQEHV--------IQKTWDSNVITPGTPFMDILAAALRYWIAYKLNTDP- 191
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + +I+S PGEGEHKIM+++R ++ P+++PN RH +YGLDADLIM
Sbjct: 192 --------AWEKLKIIISDATVPGEGEHKIMEFVRSQRASPEHDPNTRHVIYGLDADLIM 243
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKG----GSQIVTPEETK------------------- 318
LGL THEPYF +LRE+V F + G EE K
Sbjct: 244 LGLATHEPYFRVLREDVFFQESRARTCRLCGQAGHKAEECKGQAKEKNGQFDEKGKGTSL 303
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F L++S++R+YL E ++P FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 304 KPFIWLNVSILREYLAAELYVPQQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLD 359
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
I + L ++++ +P + GY+ E G+++LKR + L LA
Sbjct: 360 IRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLA 402
Score = 166 bits (419), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 139/259 (53%), Gaps = 21/259 (8%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 603 YYEQKFGVDPEDKEFRHKVARAYAEGLAWVLRYYFQGCPSWTWYYPYHYAPFAADFVDIG 662
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ L++E G PF PF+QL+ VLPA+S +PE + +LM+ +S I+++YPE+F DLNGK
Sbjct: 663 DMELQFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMSDPDSEIIDFYPEDFPVDLNGK 722
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG----------PMLVYTYSNV 680
K W+ VVL+PFIDE +L+ AM+ LL+D+E+ RN G P+ +N
Sbjct: 723 KFAWQGVVLLPFIDEKRLLAAMEKKYPLLSDDEKLRNCVGRDVLLISESHPLYHDLVANF 782
Query: 681 NLGTALAPDYFPAINE--NHAVEKPLYRDDIYVHPNKLRKGLCQ------DVNLKLYVTH 732
AP Y +IN+ + + + R+D Y+ + L L + D + L V +
Sbjct: 783 YSKKQGAPKY--SINQRISEGLAGKVERNDSYIPHSSLVSSLEEYGMPSLDDDRSLTVNY 840
Query: 733 -FPTLKHVQFTHKIENAKV 750
P KHV + + AK+
Sbjct: 841 EIPKSKHVHKSMLLRGAKL 859
>gi|207341239|gb|EDZ69347.1| YOR048Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1006
Score = 299 bits (766), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 181/461 (39%), Positives = 246/461 (53%), Gaps = 96/461 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------------YQIP----EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP +S V+ E Y P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSAPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +F Y + M +P+K+ MA+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENKPPP--ETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A++ E +A+E+ R QR
Sbjct: 119 RSARDAQI-ENEAREEIMR------------------------------------QR--- 138
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
+ E+++ + K K +DSN ITPGTPFM +L LRY+ K+ TD
Sbjct: 139 ---EEVGEIIDDAVRNK-------KTWDSNAITPGTPFMDKLAAALRYWTAFKLATDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK++ VI+S PGEGEHKIM++IR ++ P+YNPN HC+YGLDAD L
Sbjct: 187 -------GWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADFNFL 239
Query: 283 GLCTHEPYFSLLREEV--KFNTKSNKGGSQIVTPEETKFFL-----------LHLSLMRD 329
GL THEP+F +LRE+V + N K N I EE K FL LH++++R+
Sbjct: 240 GLTTHEPHFKILREDVFAQDNRKRNNLKDTINMTEEEKQFLQKQNSEQPFLWLHINVLRE 299
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YL E L PG L F F +E IDDWV M F GNDF+P+LP L + ++ +L ++
Sbjct: 300 YLSAE---LWVPG-LPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDILLDIW 355
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+ VLP L Y+ G LNL E L L S + + F+ ++
Sbjct: 356 KVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRH 396
Score = 183 bits (464), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLR-DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAP 561
E G H+ YY K E LR D +CYI + W L YYY GC SW+W+YP+HYAP
Sbjct: 601 EPGYHER-YYTAKFHVTPQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNWFYPYHYAP 659
Query: 562 YISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
+D FSHL +K+E G PFLP++QL++VLPAAS LP+ +++LM+ +S I+++YPE
Sbjct: 660 LATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKIFRSLMSEPDSEIIDFYPE 719
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG-PMLVYTYSNV 680
EF D+NGKK W+ + L+PFID+ +L+ A+ A LL+D ER+RN G P+L+ + N
Sbjct: 720 EFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAERARNIRGEPVLLISNKNA 779
Query: 681 N 681
N
Sbjct: 780 N 780
>gi|452983794|gb|EME83552.1| hypothetical protein MYCFIDRAFT_196796 [Pseudocercospora fijiensis
CIRAD86]
Length = 823
Score = 299 bits (765), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/472 (37%), Positives = 246/472 (52%), Gaps = 105/472 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY------------QIP-----------EFDNLYLDM 36
MGVP FR++S++YP +S VV E +IP E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIISPVVEEQPGEIANEDGSVTKIPIDARGPNPNGEEMDNLYLDM 60
Query: 37 NGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQ 96
NGI+H CSHP D P E+++ IF Y E + M++P+KL +A+DGVAPRAKMNQ
Sbjct: 61 NGIVHPCSHPEDRPPP--ANEEEMMVAIFEYTERVVNMVRPRKLLMIAVDGVAPRAKMNQ 118
Query: 97 QRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMN 156
QR RRFRSA+EA + A E F A
Sbjct: 119 QRSRRFRSAQEAAEKDAMAAE-------------------------FHA----------- 142
Query: 157 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKI 216
R +A EA ++K + +K +DSN ITPGTPFM L LRY++ K+
Sbjct: 143 -----RMVAAGEAGGDDEKNSK------PKKTWDSNSITPGTPFMDLLAASLRYWISYKL 191
Query: 217 TTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLD 276
TTD W+ + VI+S PGEGEHKIM+++R +S PD++PN RH +YGLD
Sbjct: 192 TTDP---------AWEKLKVIISDATVPGEGEHKIMNFVRSQRSSPDHDPNTRHVIYGLD 242
Query: 277 ADLIMLGLCTHEPYFSLLREEV-----------KFNTKSNKGGSQIVTPEETK------- 318
ADLIMLGL THEP+F +LRE+V K N + + P+E +
Sbjct: 243 ADLIMLGLATHEPHFRVLREDVFANDTKPGHCRKCNQPGHIAANCTGKPKEEEDVVKPLK 302
Query: 319 -FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F LH+ ++R+YL +E + F F +E +DDWV M F +GNDF+P+LP L I
Sbjct: 303 PFIWLHVGILREYLAVEMCVPNQ----GFRFDLERALDDWVFMCFFVGNDFLPHLPSLDI 358
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
+ L ++++ LP + GY+ + G+++L R + L LA + F+ +
Sbjct: 359 REDGIDTLIAIWRDNLPLMGGYVTKDGHVDLARAQMILEGLAKQEDAIFKRR 410
>gi|255720663|ref|XP_002545266.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135755|gb|EER35308.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 981
Score = 298 bits (764), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 177/452 (39%), Positives = 244/452 (53%), Gaps = 92/452 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE---------YQIP----EFDNLYLDMNGIIHNCSHP 46
MGVP FR++S +YP +S V+ E Y+ P E DNLYLDMNGI+H CSHP
Sbjct: 1 MGVPALFRWLSRKYPKIISPVIEEEDHEIGGARYEDPNPNGEIDNLYLDMNGIVHPCSHP 60
Query: 47 -NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 105
+ P TE ++F DIF Y + + M +P+K+ +A+DGVAPRAKMNQQR RRFR+A
Sbjct: 61 EHKKAPE---TEDEMFLDIFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFRAA 117
Query: 106 KEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRS 165
Q AK K +L E K + RG
Sbjct: 118 -------QDAKLKSHQLEIE---------------------------VKEREMRG----- 138
Query: 166 AKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
EV++ K K K++DSN ITPGTPFM RL + LRY+V K+ D
Sbjct: 139 ----EVIDDAIKGK-------KQWDSNAITPGTPFMDRLAEALRYWVAYKLANDP----- 182
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
W ++ VI+S PGEGEHK+M++IR +S P Y+PN +HC+YGLDADLI LGL
Sbjct: 183 ----GWANLQVIISDATVPGEGEHKLMNFIRSQRSDPQYDPNTKHCIYGLDADLIFLGLA 238
Query: 286 THEPYFSLLREEV------KFNTK-----SNKGGSQIVTPEETKFFLLHLSLMRDYLELE 334
THEP+F +LRE+V KF + + + T + F LH+S++R+YL++E
Sbjct: 239 THEPHFRVLREDVFAKQEKKFTIRDQIAEATSDAVKTKTEDRKPFLWLHVSVLREYLQVE 298
Query: 335 FGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLP 394
+ P FPF +E IDDWV + F GNDF+P+LP L + + + L + ++ L
Sbjct: 299 LYAPRMP----FPFQLERAIDDWVFLCFFAGNDFLPHLPSLDVRDNGIDTLVQCWKRSLG 354
Query: 395 TLDGYINEGGYLNLKRFEKFLTKLASFDFEQF 426
L Y+ G LNL+ E ++ LA+ + E F
Sbjct: 355 RLKDYVTCDGKLNLESVEVLMSNLATKEDEIF 386
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 108/171 (63%), Gaps = 8/171 (4%)
Query: 503 EFGQHKTDY---YHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHY 559
E G HK Y +H K D + ++ R+ Y+ I W YYY GC SW WY+P+HY
Sbjct: 548 EPGYHKRYYEIKFHCKSD--EEIEKMRREVVAHYVEGIAWVALYYYQGCPSWKWYFPYHY 605
Query: 560 APYISDIKDFSHL---NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPIL 616
AP+ +D + L +K+E+G+PF PF+QL++VLPAAS LP+ ++ LM+ +S I+
Sbjct: 606 APFAADFTNLQELFPNGIKFELGQPFRPFEQLMSVLPAASGHALPKVFRELMSNPDSEII 665
Query: 617 EYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
++YPEEF D+NG K W+ + L+PFIDE +L+ A+ LLT EE+ RN
Sbjct: 666 DFYPEEFEIDMNGAKMSWQGIPLLPFIDEKRLLDAVQKQYELLTPEEKDRN 716
>gi|340057226|emb|CCC51568.1| putative exoribonuclease 2 [Trypanosoma vivax Y486]
Length = 783
Score = 298 bits (762), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 202/714 (28%), Positives = 329/714 (46%), Gaps = 124/714 (17%)
Query: 1 MGVPKFFRYISERY-PCLSEV--------VREYQIPE-------FDNLYLDMNGIIHNCS 44
MG+ FF ++ Y PC+ +V ++ PE FDNLYLDMNG++H C
Sbjct: 1 MGIAGFFLWLRRWYGPCIEDVPESVVQALLKGEAPPEADMGHWKFDNLYLDMNGLVHPCC 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
H P + +E+++F IF ++++FR++QP+K M +DGVAP++KMNQQR RRFR+
Sbjct: 61 HDTAPLPEPK-SEEEMFDRIFSQLDLVFRVVQPRKCLVMCVDGVAPQSKMNQQRSRRFRA 119
Query: 105 AKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFR 164
A+E +Q A + + +L M + +P+++
Sbjct: 120 AEERAESDQLAMQCAD-------------------ELVEMGLPRPSPKSR---------- 150
Query: 165 SAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKD 224
+D N ITP TPFM RL + +F+ K+ D
Sbjct: 151 ------------------------WDHNVITPSTPFMERLGVAVEWFIGKKVNEDP---- 182
Query: 225 TLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGL 284
W+ V V+ S PGEGEHKIM +IR ++S+P YNP H +YG+DADLI LGL
Sbjct: 183 -----AWQKVAVVFSDSHVPGEGEHKIMQFIRGLRSQPGYNPQTSHVIYGMDADLICLGL 237
Query: 285 CTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVL 344
THE ++LR ++ S+ F L R +L+ +F +
Sbjct: 238 STHEENVTILRNQL----------SETFQGTPNTFCYFSLFKYRQFLKRDFKNIAN---- 283
Query: 345 SFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGG 404
E +IDD+V + F +GNDF+P++P L I + L Y Y+ E G
Sbjct: 284 ---MDFERVIDDFVFLCFFVGNDFLPHVPLLSIKTKGIESLLDHYVRDFQN-HSYLTEKG 339
Query: 405 YLNLKRFEKFLTKLASFDFEQFREKYADIQ--------YLEGKMGKKFSDVFHKEKSKEM 456
+ FL R++Y +++ +E ++GK +++ S +
Sbjct: 340 EVKFGVLSSFLRHFVVDYLCALRQEYLELRNVTKRARANVEQRLGKGENELKEVLDSLKE 399
Query: 457 DPDLAALIK--ATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFF-SEFGQHKTDYYH 513
D AA + A E A+ E +S D ++R ++ +FG ++
Sbjct: 400 DGSNAAEVSEAAHGIKLSLAKERARFVADRESMGFSYTDPDYRDAYYEKKFGWSASNRTR 459
Query: 514 YKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF-SHL 572
++ ++ E Y+R QW + YY +GC +W WYYP+HYAP + D+ F ++
Sbjct: 460 FEKQIKRLCGE--------YLRGTQWVMRYYTSGCPAWEWYYPYHYAPLLEDLAAFNGNV 511
Query: 573 NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQ 632
N+K E+G P P QLLAV P S LP + + +S + ++YP+ D +
Sbjct: 512 NVKMELGAPRHPIVQLLAVQPRLSLHALPVELHSAVMDPHSVLGKFYPDSVEVDYSEANF 571
Query: 633 DWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTAL 686
++ ++ +PFID +L++A + + L D G L++ + + +G L
Sbjct: 572 SYQGIMRLPFIDCQELLRACETLVELEPD-------RGSTLLFCHMSSRIGKLL 618
>gi|189191016|ref|XP_001931847.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973453|gb|EDU40952.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1104
Score = 297 bits (761), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 179/486 (36%), Positives = 263/486 (54%), Gaps = 113/486 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIP--------------------EFDNLYLDMNGII 40
MGVP FR++S++YP + V+E ++P EFDNLYLDMNGI+
Sbjct: 1 MGVPAMFRWLSQKYPKIVSTVQE-ELPKKVGDAVIPVDRTGPNPNGEEFDNLYLDMNGIV 59
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H CSHP D P + TE + IF Y + + M++P+KL +MA+DGVAPRAKMNQQR R
Sbjct: 60 HPCSHPEDK-PAPK-TEADMMMAIFEYTDRVVGMVRPRKLLYMAVDGVAPRAKMNQQRSR 117
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+A+E AKEK E+R +F + +N Q+
Sbjct: 118 RFRAARE-------AKEK-----DEERAEFQKI---------------------LNSQKA 144
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
R ++ LE+ EK +DSN ITPGTPFM L + L+Y+ K TTD
Sbjct: 145 SR---GEDINTLEEV---------VEKTWDSNAITPGTPFMHLLAESLQYWCAYKFTTDP 192
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
WKD+ VI+S PGEGEHKIM++IR ++ P ++PN H +YGLDADLI
Sbjct: 193 ---------SWKDMKVIISDASVPGEGEHKIMNFIRSQRAMPTHDPNTSHVIYGLDADLI 243
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNKGGSQ------IVT----PEETK------------ 318
ML L THEP+F +LRE+V +++ +K ++ I T PE+ K
Sbjct: 244 MLSLATHEPHFKVLREDVFYDSGKDKVCTRCGRKGHIRTNCEFPEDEKKLTEEEAAEEWA 303
Query: 319 --------FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ LH +++R+YL +E K +F + +E +DDWV M F +GNDF+P
Sbjct: 304 TSEHQLKPYIWLHTNVLREYLAVEMDTPKR----TFKYDLERSLDDWVFMCFFVGNDFLP 359
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF--RE 428
+LP L I + + LL +++++ +D Y+ + GY +++R ++ ++ LAS + F R+
Sbjct: 360 HLPSLEIRDQGIDLLISIWRDLAAEMDDYVTKDGYPDMRRVQQIMSALASREAGIFKKRK 419
Query: 429 KYADIQ 434
+ AD Q
Sbjct: 420 EVADRQ 425
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 98/162 (60%), Gaps = 2/162 (1%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K A A Y + W L YY GC SW+WY+PHHYAP+ +D
Sbjct: 599 YYEQKFHVAPNDIAFRNKVARQYAEGLCWVLAYYMQGCPSWTWYFPHHYAPFAADFVGLE 658
Query: 571 HLNLK--YEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLN 628
++ + +E G PF P++QL+ VLPAAS +PEP++ LM NS I+++YPE+F DLN
Sbjct: 659 DMDPRKLFEKGVPFHPYEQLMGVLPAASNHAIPEPFRVLMEDPNSSIVDFYPEDFPIDLN 718
Query: 629 GKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
GKK W+ V ++PFIDE +L++AM L+D+ER RN G
Sbjct: 719 GKKFAWQGVAVLPFIDEKRLLEAMATKYPELSDDERKRNEFG 760
>gi|395330505|gb|EJF62888.1| 5'-3' exoribonuclease 2 [Dichomitus squalens LYAD-421 SS1]
Length = 1182
Score = 297 bits (761), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 184/470 (39%), Positives = 238/470 (50%), Gaps = 110/470 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ---IP---------------------EFDNLYLDM 36
MGVP FR++S++YP + V E + IP EFD+LYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIILPVIEAEQATIPDTEGNEVAVPVNIADPNPNGVEFDSLYLDM 60
Query: 37 NGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQ 96
NGI+H C+HP E +IF Y E + M++P+KL FMAIDGVAPRAKMNQ
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMM--IEIFSYTERVVNMVRPRKLLFMAIDGVAPRAKMNQ 118
Query: 97 QRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMN 156
QR RRFRSA+EA+ E+ KE
Sbjct: 119 QRSRRFRSAQEAKEKEEARKES-------------------------------------- 140
Query: 157 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKI 216
+ E K E +K +DSN ITPGTPFM L LRY+V K+
Sbjct: 141 ------------IAMWEAMGKTLSEEEKNKKAWDSNAITPGTPFMDLLASSLRYWVVYKM 188
Query: 217 TTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLD 276
TD WKDV VI+S PGEGEHKIMD+IR +S P ++PN H +YGLD
Sbjct: 189 NTDP---------GWKDVQVIISDASVPGEGEHKIMDFIRRQRSNPGHDPNTHHVIYGLD 239
Query: 277 ADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVT--------------------PEE 316
ADLIML L THEP+F +LRE+V F+ + ++ +I PE+
Sbjct: 240 ADLIMLSLATHEPHFRVLREDV-FHQEGSRTACRICGQEGHYAAQCTGTKAEIKKTPPEK 298
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F L ++++R+YLE E L P V FPF+ E IDDWVL+ F +GNDF+P+LP L
Sbjct: 299 KPFIFLDVAILREYLEAE---LNVPNV-PFPFNFEQAIDDWVLLIFFVGNDFLPHLPSLE 354
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF 426
I GA+ L K+++ LP + GYI G L L R + L LA + E F
Sbjct: 355 IREGAIDTLLKIWRTELPRMGGYITNHGQLELSRAQIILEGLARREDEIF 404
Score = 160 bits (406), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 104/171 (60%)
Query: 507 HKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI 566
++ YY K E + + YI + W L YYY G SW WYYP H+AP+ +D
Sbjct: 688 YRERYYSQKFGAEYSDKEFRKQVTKSYIEGMAWVLQYYYQGTPSWHWYYPFHFAPFAADF 747
Query: 567 KDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+D +++ + +G+PF PF+QL+ V PA+S+ +P + +LMT + SPI+++YP F D
Sbjct: 748 EDLDKMDIDFTLGQPFKPFEQLMGVFPASSRSHIPATFHDLMTEDTSPIIDFYPSTFQID 807
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
+NGK+ W+ V L+PFIDE +L+ AM L+D+E+ RN+ G ++ Y
Sbjct: 808 MNGKRMAWQGVALLPFIDEKRLLDAMGPRYPNLSDDEKRRNQWGNNFLFVY 858
>gi|320163497|gb|EFW40396.1| 5'-3' exoribonuclease 2 [Capsaspora owczarzaki ATCC 30864]
Length = 1196
Score = 297 bits (760), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 179/495 (36%), Positives = 259/495 (52%), Gaps = 107/495 (21%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP-----------EFDNLYLDMNGIIH 41
MGVP FRY+S ++P L S V+ ++P EFDNLYLDMNG+IH
Sbjct: 1 MGVPAMFRYLSNKFPKLVTPCAETPSTVINGTKVPIDTSRPNPNQQEFDNLYLDMNGLIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D P +E ++ IF YIE +F +++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCCHPIDRPPP--ASEDEMMVLIFEYIERIFAIVRPRKLVYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FR+ +EA K E +L DGV ++ Q++G
Sbjct: 119 FRAVREAAESATKLAELRAKL----------------------EADGV----RLPQKKGH 152
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ FDSNCITPGT FM +L LRYF+ K+ D
Sbjct: 153 K--------------------------FDSNCITPGTEFMEQLAVCLRYFIHRKLMEDP- 185
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+++ VILS PGEGEHKIMDYIR+ ++ P+Y+PN++H +YG DADLIM
Sbjct: 186 --------GWQNIKVILSDANVPGEGEHKIMDYIRHQRAHPEYDPNIKHVMYGADADLIM 237
Query: 282 LGLCTHEPYFSLLREEVKFNT------------KSNKGGSQIVTPEET----------KF 319
LGL THE F+++REE NT +S + + P+ T F
Sbjct: 238 LGLATHEISFTIIREEFVPNTPKPCSICNQMGHESTECRGEASVPDSTVEAAPASGPKNF 297
Query: 320 FLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN 379
+ + ++R+YL E + E L F F IE IDDWV M F +GNDF+P+LP L I
Sbjct: 298 IFISIPILREYLSHEL-LISE--RLPFEFDIERAIDDWVFMCFFVGNDFLPHLPSLEIRE 354
Query: 380 GALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGK 439
GAL L +Y+ LP++ G+I + G + ++R + L ++ + + F+ ++++ + +
Sbjct: 355 GALETLLSIYRRRLPSMGGFITDSGQVVVERALEILREIGTMEDSIFQRRHSEDERQKRN 414
Query: 440 MGKKFSDVFHKEKSK 454
++ D +E+S+
Sbjct: 415 EQRREQDRKRREQSE 429
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K + N+ A Y+ + W L YYY G SW WYYP+HYAP+ SD+
Sbjct: 634 KERYYQNKFHVSADDNDFRSKLAAAYLEGLCWVLQYYYQGVPSWKWYYPYHYAPFASDLP 693
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+++N K++ G PF P +QL+ VLPAAS +P+ + LM+ + SPIL++YP EF D
Sbjct: 694 AATNVNTKFDKGPRPFRPLEQLMGVLPAASGNFVPKTWAKLMSDDESPILDFYPTEFEVD 753
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
+NGKK W VVL+PFI+E +L+ + V L EE RN+ G +VY
Sbjct: 754 MNGKKAAWMGVVLLPFIEEKRLLDTLKTVYDDLRPEEVERNKLGYEVVYV 803
>gi|156085645|ref|XP_001610232.1| 5'-3' exoribonuclease (XRN2) [Babesia bovis T2Bo]
gi|154797484|gb|EDO06664.1| 5'-3' exoribonuclease (XRN2), putative [Babesia bovis]
Length = 1388
Score = 297 bits (760), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 257/936 (27%), Positives = 404/936 (43%), Gaps = 227/936 (24%)
Query: 1 MGVPKFFRYISERYPCLSEVVR---------------------EYQ---IPE-FDNLYLD 35
MGVP FF+++++RYP + E R +Y+ +P+ FDNLYLD
Sbjct: 1 MGVPGFFKWLAQRYPLICETYRGSVAEKDDAFRLLKSIERSDDQYETSSVPDGFDNLYLD 60
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
+NG I + H IE L + ++ ++ F+ I
Sbjct: 61 VNG---------------------IIHNCSHSIEELSQGLRCEEDIFVLI---------- 89
Query: 96 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFIT--LKFCFPKKLFFMAIDGVAPRA 153
F +I +K P+KL ++AIDGVAPRA
Sbjct: 90 --------------------------------FQYINNLVKIVRPRKLLYLAIDGVAPRA 117
Query: 154 KMNQQRGRRFRSAKEA---EVLEQKAKEKG--ERLPTEK------RFDSNCITPGTPFMC 202
K+ QQR RRFRSA+++ EV+ Q +E E+ P++ +FD ITPGTPFM
Sbjct: 118 KIMQQRDRRFRSARDSNKNEVVFQTIQENNGIEKEPSDGDGDVNFKFDPIQITPGTPFME 177
Query: 203 RLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSK- 261
RL +LR+F + I +K WK++ +++SG + PGEGEHKIM+YIR KS
Sbjct: 178 RLSVRLRFFAHMMIHENK---------AWKNLKIVVSGSDVPGEGEHKIMEYIRNDKSNR 228
Query: 262 ---------PDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIV 312
P Y + HC+YGLDADLIML L THEPY LLRE+V F NK + +
Sbjct: 229 HDAARAGGTPQY---ISHCIYGLDADLIMLSLATHEPYVCLLREQVYF---FNKQTNSRM 282
Query: 313 TPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
+ LH+ ++R+Y+ + + P + P +I+ ++DD+VLM +GNDF+P+
Sbjct: 283 MMNMNDYIFLHIGILREYILHDM--VISPELRRQPRTIDRVVDDFVLMSMFMGNDFLPHG 340
Query: 373 PDLHIINGALPLLYKVYQEVL-----PTLDGYI---NEGGYLNLKRFEKFLTKLASFDFE 424
I +G L +Y L + +G+I G +N FL L +
Sbjct: 341 KFAKITDGGLNTYITLYSRYLEERYRSSPNGHIWLVTGCGEINCTNLLHFLNMLVKRESS 400
Query: 425 QFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANY 484
+ + E G K K ++ + A D +E Y
Sbjct: 401 RITD--------ELHCGPDAGRGEAKRNGKSGKTEITVIDVANCCIMTDPSEFRAKYEGK 452
Query: 485 EEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTN-------EVLRDQAECYIRAI 537
+ + EWR+ ++ +D +K + T EV+RD Y+ I
Sbjct: 453 PKSF-----AEWRSRYYMAKMGIASDVIVHKSTKSSDTESSPCTIPEVVRD----YLEGI 503
Query: 538 QWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSH-------------------------- 571
QW ++YYY G SW+WY YAP +SD++ F
Sbjct: 504 QWVMYYYYRGVPSWNWYLRCKYAPLLSDVRFFIQRMKQSYDRGGNRPRDCPANATTLSQV 563
Query: 572 LNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKK 631
+ LK+E+ EP PFQQL+ V+P A+ LP + NLMT SP+ +YYPE F D++
Sbjct: 564 MQLKFEISEPVTPFQQLMMVMPPAAAHFLPTVFGNLMTDTESPLRKYYPEHFDIDMDDTN 623
Query: 632 QDWEAVVLIPFIDEVKLIKAMDAV---------------------EHLLTDEERSRNRHG 670
W V L+P + L++ M+ LT++E+ RN G
Sbjct: 624 VQWGGVTLLPIVPPNLLLRLMNGALMSKGDEKFVVGPSGKLCYMESTKLTEDEKMRNCTG 683
Query: 671 PMLVYTYSNVNLGTALAP--DYFPAINENHAVEKPLYRD----------DIYVHPNKLRK 718
+Y ++ GT + + F +I + ++ ++ ++L+K
Sbjct: 684 VARIYYHNADGKGTTIESPMETFTSIVNCQTTYSTFFNPTLKRGQTFPIELMMYNHELQK 743
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQV 777
G + + + FP+L + F + V+VF S SI + V+ + +++
Sbjct: 744 GY-HAPSERGHNIWFPSLNSLPF-EPYKRGGVQVFHMKSHFPSIYLWVKQPLHRGAVRNF 801
Query: 778 ADQILGKTIFINYPHLIEIRVQAVAT-----KDSRI 808
A K + + YP+ R++A+ T KD RI
Sbjct: 802 ASAKRSKYVVVGYPYQHIGRLEAIHTPYVTVKDGRI 837
Score = 45.1 bits (105), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 1013 FSRKNEEVVGFTRR---DETTKKWFYTEQVVTLIKNYMKQFPEVFG-FLKDHSSDD---- 1064
++R +EE++ TR D Y+ V+ L+ +Y +FPE+F FLK+ +
Sbjct: 1125 YTRCSEELLTDTRMSNPDTLLLGVQYSGAVLNLVSDYRDKFPELFEYFLKNDVKPNNSAK 1184
Query: 1065 ----IYLRDDVF----PHQGEQRVAQIVSWLKEQPHAKAE-VRPCGAAVVDAKVVSLI-- 1113
+L DV P E + Q++ ++K Q + + V + D + S+
Sbjct: 1185 GGYRFHLNMDVVFTGTPEIIEFKTLQLLKYVKSQVFRRLKMVVGKYDCLTDEDIASISTI 1244
Query: 1114 ---EHAVDTCEKVEKQITLFVKPNKLYIPK-PTLDKLCPDPDTKFKLFDRVVNIRDCYTV 1169
+HAVD+ +K ++ L+IP T + D L VV I TV
Sbjct: 1245 YDDQHAVDSSDKDSCKLVRVSHIKNLHIPSYHTGTVFMREED--ITLGQCVVYINHNETV 1302
Query: 1170 PLGYRGTIIGIV-QGETSYDAMYDVVFDKPFPHGVKI--RCSESRG 1212
PLG RGT++GI Q +++V+ +K ++ RC RG
Sbjct: 1303 PLGTRGTVVGIYPQNADGTSVLFEVLLEKNSMGAGQLFGRCGNMRG 1348
>gi|403368617|gb|EJY84145.1| 5'-3' exoribonuclease 2 [Oxytricha trifallax]
Length = 1735
Score = 296 bits (759), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 169/435 (38%), Positives = 245/435 (56%), Gaps = 72/435 (16%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MG+PKFF++++ RYP L ++ RE Q+P DNLYLD+NGI+HNC H ND H R+++ +
Sbjct: 1 MGIPKFFKWLTRRYPQVLLDIKREEQVPPIDNLYLDLNGIVHNCIHGNDAKLHERVSQLE 60
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
F+++ +I I+ AID + K
Sbjct: 61 NFEEV--WINIM-----------KAIDELVHTIK-------------------------- 81
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 179
PKKL F+A+DGVAPRAKMNQQR RRFR+AK++++L+ K +++
Sbjct: 82 ------------------PKKLLFLAVDGVAPRAKMNQQRARRFRTAKDSQLLKDKFQKE 123
Query: 180 GERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILS 239
G+ PT FDSN I+PGT FM L +QL +FV+ K TD ++++ VILS
Sbjct: 124 GKEAPT--LFDSNAISPGTKFMEELSKQLDFFVQYKQNTDPVYQNLEK--------VILS 173
Query: 240 GHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK 299
PGEGEHK+MD+IR K +Y+PN RHC YG DADLIML L THEP F +LREE
Sbjct: 174 DAFVPGEGEHKMMDFIRQAKHDENYDPNTRHCFYGADADLIMLSLLTHEPNFIILREE-H 232
Query: 300 FNTKSNKGGSQIVTPEETKFF-LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
K +GG Q + + T + ++ ++L+R+Y LE+ + + F +E IIDD+V
Sbjct: 233 VVRKIKQGGVQRLDLKRTNNYQVMFINLLREYFLLEYRAVAPQ--MKMKFDLERIIDDFV 290
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
F IGNDF+P+L L I G+L + +Y+ +LP+++ YI E G + R E F+ L
Sbjct: 291 FFCFFIGNDFLPSLSALDIGEGSLDSIIDLYKRLLPSMENYITEEGRIYWDRAEPFIKML 350
Query: 419 ASFDFEQFREKYADI 433
+ + F+ + I
Sbjct: 351 GEHEHDSFKNRVNKI 365
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 91/166 (54%), Gaps = 21/166 (12%)
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISD---------------IKDFSHLNLKYE 577
Y+ +QW L+YYY G W WYYP+HYAP ISD I +F + +
Sbjct: 596 YLEGLQWVLYYYYRGAQHWRWYYPYHYAPMISDLDENIVNNFLGGKRYIDEFEIDHNCAD 655
Query: 578 MGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAV 637
+ EP+ PFQQLL++LPA S LLP Y ++ E + +Y+P+EF DLNG+ +EA
Sbjct: 656 INEPYTPFQQLLSILPAKSLHLLPSQYAKIVLGE---LRQYFPDEFDIDLNGRTLAYEAA 712
Query: 638 VLIPFIDEVKLIKAMDAV--EHLLTDEERSRNRHG-PMLVYTYSNV 680
LIPF DE I ++ ++ L D + SRN VYTY ++
Sbjct: 713 CLIPFCDEKLFIGQETSLLRDNPLNDHDDSRNIVAFDYKVYTYDHL 758
Score = 65.9 bits (159), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 168/443 (37%), Gaps = 90/443 (20%)
Query: 855 VYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKTIDEIFYPG 914
VY Q E F P +T++R Y + +A L Q +S F P
Sbjct: 965 VYSQDSE-----FLPMCMITRRRD------PYHFHNANLRCAQYTQS---------FKPN 1004
Query: 915 CQCFALSNPHYGSGGCVISTVKEENSFIKLSF----------------KVQQEPDLSDLV 958
Q L+ +G G V V +N IK+ F K Q D V
Sbjct: 1005 KQVVCLNTHFFGVIGKV-QQVDLKNKKIKVQFDKREEQSKIHDPFMGQKCLQNKDNDAFV 1063
Query: 959 HLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRH--NIGLNIKFSRK 1016
LQ Y + + +L + +++R TGS+ + + + +R ++GLN+K K
Sbjct: 1064 PLQ---TRRYFSDHQIEQELKLKTGVVNRITGSLLVTFNDRQKYERQVIDLGLNLKNYTK 1120
Query: 1017 NEEVVGFTRR--DETT---------------------KKWFYTEQVVTLIKNYMKQFPEV 1053
+ F R DE K W Y E+ + +I+ Y +++P V
Sbjct: 1121 KAHIPDFVRYVVDEDVADNQFDDYHHNHHARGAKHVRKHWEYAEECLEIIREYKEKYPFV 1180
Query: 1054 FGFLKD--HSSDDIYLRDDVFPHQ-----GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVD 1106
+ S+ + D+F +Q + +I +W+++ P + G ++
Sbjct: 1181 IDIVAKTMRSNKQMLSLKDIFGKNQDELSSQQFIKEIANWIEKLPTSNLPYVEMGFDALN 1240
Query: 1107 AKVVSLIEHAVDTCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKF--------KLFD 1158
++++ +I +++ L + ++ P + P F ++ D
Sbjct: 1241 SQLIQIINDHGKLIRDTYRKVQLKCQEVEILDPTYVFQEQFPYWSLPFNARSVNDYRVGD 1300
Query: 1159 RVVNIRDCYT--VPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYR 1214
RV+++R +P G RGT++G + V+FD+ F +G I C RG
Sbjct: 1301 RVMSVRSVKREYIPFGLRGTVVGKTNDKII------VLFDEQFLNGNSIYGHCENYRGGF 1354
Query: 1215 MPAQAMINLSYGERLCGNSNPHV 1237
+ +INL+ NSN V
Sbjct: 1355 IEPNHLINLTKRFNSIMNSNYRV 1377
>gi|330916061|ref|XP_003297277.1| hypothetical protein PTT_07622 [Pyrenophora teres f. teres 0-1]
gi|311330133|gb|EFQ94619.1| hypothetical protein PTT_07622 [Pyrenophora teres f. teres 0-1]
Length = 883
Score = 296 bits (759), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 174/479 (36%), Positives = 261/479 (54%), Gaps = 111/479 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIP--------------------EFDNLYLDMNGII 40
MGVP FR++S++YP + V+E ++P EFDNLYLDMNGI+
Sbjct: 1 MGVPAMFRWLSQKYPKIVSTVQE-ELPKKVGDAVIPVDRTGPNPNGEEFDNLYLDMNGIV 59
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H CSHP D P + TE + IF Y + + M++P+KL +MA+DGVAPRAKMNQQR R
Sbjct: 60 HPCSHPEDK-PAPK-TEADMMMAIFEYTDRVVGMVRPRKLLYMAVDGVAPRAKMNQQRSR 117
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+A+E AKEK E+R +F + +N Q+
Sbjct: 118 RFRAARE-------AKEK-----DEERAEFQKI---------------------LNSQKA 144
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
R ++ + LE+ EK +DSN ITPGTPFM L + L+Y+ K TTD
Sbjct: 145 SR---GEDIDTLEEV---------MEKTWDSNAITPGTPFMHLLAESLQYWCAYKFTTDP 192
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
WKD+ VI+S PGEGEHKIM++IR ++ P ++PN H +YGLDADLI
Sbjct: 193 ---------SWKDMKVIISDASVPGEGEHKIMNFIRSQRAMPTHDPNTSHVIYGLDADLI 243
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNKGGSQ------IVT----PEETK------------ 318
ML L THEP+F +LRE+V +++ +K ++ I T PE+ K
Sbjct: 244 MLSLATHEPHFKVLREDVFYDSGKDKVCTRCGRKGHIRTNCEFPEDEKKLTEEEAAEEWA 303
Query: 319 --------FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+ LH +++R+YL +E K +F + +E +DDWV M F +GNDF+P
Sbjct: 304 TSEHQLKPYIWLHTNVLREYLAVEMDTPKR----TFKYDLERSLDDWVFMCFFVGNDFLP 359
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
+LP L I + + LL +++++ +D Y+ + GY +++R ++ ++ LA+ + F+++
Sbjct: 360 HLPSLEIRDQGIDLLISIWRDLAAEMDDYVTKDGYPDMRRVQQIMSALATREAGIFKKR 418
Score = 152 bits (384), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 98/162 (60%), Gaps = 2/162 (1%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K A A Y + W L YY GC SW+WY+PHHYAP+ +D
Sbjct: 599 YYEQKFHVAPNDIAFRNKVARQYAEGLCWVLAYYMQGCPSWTWYFPHHYAPFAADFVGLE 658
Query: 571 HLNLK--YEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLN 628
++ + +E G PF P++QL+ VLPAAS +PEP++ LM NS I+++YPE+F DLN
Sbjct: 659 DMDPRKLFEKGVPFHPYEQLMGVLPAASNHAIPEPFRVLMEDPNSSIVDFYPEDFPIDLN 718
Query: 629 GKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
GKK W+ V ++PFIDE +L++AM L+D+ER RN G
Sbjct: 719 GKKFAWQGVAVLPFIDEKRLLEAMGTKYPELSDDERKRNEFG 760
>gi|226289075|gb|EEH44587.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb18]
Length = 1049
Score = 296 bits (758), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 175/477 (36%), Positives = 250/477 (52%), Gaps = 113/477 (23%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S VV E ++P E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISSVVEELPQEINEQEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P E+++ +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPP--PSNEEEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA+ + EK+ +F L + +Q G+
Sbjct: 119 FRSAQEAKEAD------------EKKVEFAKL---------------------LRKQNGK 145
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ E++E+ T K +DSN ITPGTPFM L LRY+V K+ TD
Sbjct: 146 K----SCEEIVEEV---------TMKTWDSNVITPGTPFMDILAAALRYWVAYKLNTDP- 191
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + VI+S PGEGEHKIM++IR +S P+++PN RH +YGLDADLIM
Sbjct: 192 --------AWEKLKVIISDATVPGEGEHKIMEFIRSQRSCPEHDPNTRHVIYGLDADLIM 243
Query: 282 LGLCTHEPYFSLLREEVKFNTKSN-----------------------------KGGSQIV 312
LGL THEP+F +LRE+V F KG +
Sbjct: 244 LGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKGKGSSL 303
Query: 313 TPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
P F LH+S++R+YL +E ++P FPF +E +DDWV M F +GNDF+P+L
Sbjct: 304 KP----FIWLHVSVLREYLAVEMHVPQQP----FPFDLERALDDWVFMCFFVGNDFLPHL 355
Query: 373 PDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
P L I + L ++++ +P + GY+ + G+++L R + L LA + FR +
Sbjct: 356 PSLDIRENGIDTLIAIWRDNIPAMGGYLTKDGHVDLNRAQLILQGLAKQEDAIFRRR 412
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 101/160 (63%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D
Sbjct: 582 YYEQKFQVHPKDIEFRHKVARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVGLG 641
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+N+++ G PF PF+QL+ VLPAAS +PE + +LM+ NS I+++YPEEF DLNGK
Sbjct: 642 KMNIEFNRGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPNSEIIDFYPEEFPIDLNGK 701
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V L+PFIDE +L+ AM+ HLL+ EE +RN G
Sbjct: 702 KFAWQGVALLPFIDEKRLLVAMEKRYHLLSSEEHARNSTG 741
>gi|156839563|ref|XP_001643471.1| hypothetical protein Kpol_1006p9 [Vanderwaltozyma polyspora DSM
70294]
gi|156114083|gb|EDO15613.1| hypothetical protein Kpol_1006p9 [Vanderwaltozyma polyspora DSM
70294]
Length = 1292
Score = 296 bits (758), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 149/295 (50%), Positives = 201/295 (68%), Gaps = 19/295 (6%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTE-KRFDSNCITP 196
PKK+F+MAIDGVAPRAKMNQQR RRFR+A E E K E G + E K FD N ITP
Sbjct: 80 PKKVFYMAIDGVAPRAKMNQQRSRRFRTAMENEKAMNKIIENGGVISEEIKPFDPNAITP 139
Query: 197 GTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIR 256
GT FM +L + L+YF+ KI+ D W ++ +ILSGHE PGEGEHKIMDYIR
Sbjct: 140 GTTFMEKLTKYLKYFIHDKISND---------INWANIEIILSGHEVPGEGEHKIMDYIR 190
Query: 257 YMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF--NTKSNKGGSQIVTP 314
+S+ YNPN+RHC+YGLDADLI+LGL TH P+F++LREEV F K+ K G ++
Sbjct: 191 KKRSQKGYNPNLRHCIYGLDADLIILGLSTHAPHFAILREEVTFTKTLKNKKTGLEL--- 247
Query: 315 EETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPD 374
+F+ L LSL+R+YLELEF + L + + E I+DD++L+ F+IGNDF+PNLPD
Sbjct: 248 --QRFYFLQLSLLREYLELEFKDIANK--LKYKYDFERILDDFILILFVIGNDFLPNLPD 303
Query: 375 LHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
LH+ GA P++ + ++ L + +GYINE G ++LKR ++ L+ F+ F++K
Sbjct: 304 LHLNKGAFPVILETFKLSLLSSEGYINENGTIDLKRLSTWIDYLSKFELMNFKQK 358
Score = 251 bits (642), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 207/725 (28%), Positives = 342/725 (47%), Gaps = 47/725 (6%)
Query: 504 FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYI 563
F + K+ YY KL E + D A+ Y+ +QW ++YYY GC SW W+Y +HYAP I
Sbjct: 511 FTKMKSSYYLRKLSIDITDEEKVTDLAKNYVEGLQWVMYYYYRGCASWGWFYRYHYAPRI 570
Query: 564 SDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEF 623
SDI + +++E +PF PFQQL+AVLP SKEL+P ++ LM ++SPIL++YP E
Sbjct: 571 SDIYLGLNQKIQFEKDDPFTPFQQLMAVLPERSKELIPTIFRPLMYNQDSPILDFYPSEV 630
Query: 624 ATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLG 683
D NGK DWEAVVLI F+D+ +L+ AM+ + L ++ RN+ G +++ Y NV
Sbjct: 631 KLDRNGKSADWEAVVLISFVDQERLVAAMEPLLKDLEPKDARRNKFGTDILFLYENVEKE 690
Query: 684 TALAP--DYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTH-FPTLKHVQ 740
+P + FP I + E+ ++ +I P KL+ GL L+ + FPTL +Q
Sbjct: 691 NYRSPNINIFPDIFSDKCHEE-IFSLEI---PEKLQYGLLPGTFLRQKLLFGFPTLYTLQ 746
Query: 741 FTHKIENAKVKVFQQPSRNESIIIV---QDKVQVPSLKQVADQILGKTIFINYPHLIEIR 797
F K K+F+ PS+ E++ ++ + K S++ + + LGKTI+I++P+L E +
Sbjct: 747 FMGKQGMLGCKIFENPSKQETMSLIIHNRKKEDSASIEDFSTRYLGKTIYIHWPYLKESK 806
Query: 798 VQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYG 857
+ ++ + + K + + +K+I + K ++ N ++
Sbjct: 807 LHSIYNDGRFYELQFIPDKLGHKHKKFVTRSATSEEKAIMNKMKDKWSRNLKNQGGII-T 865
Query: 858 QPVES-----RKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKTIDEI-- 910
+P+ S R FG K R++ Y Q + + E + D++
Sbjct: 866 EPIHSLVVVNRFKGFGKSRKDALIRSYEEEVEYYPLQLVIEKVMHNMEIALLNSQDQLRT 925
Query: 911 -FYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEP------DLSDLVHLQDD 963
+ G L + YG+ +I + E N F+ V+ EP ++ ++D
Sbjct: 926 EYKIGSTFVYLGDNLYGAKAKIIE-LDENNKFV-----VEIEPFNSNNENMLKRFRIKDK 979
Query: 964 TVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGF 1023
Y PS+ +A L IS L LSR T I D + ++ N+GL +K ++ +V G+
Sbjct: 980 ENIKYYPSFVLAKMLKISSLALSRITSKYRITDMS---GQQINVGLPLKNPGRDIKVEGY 1036
Query: 1024 TRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQR---V 1080
+R+ W ++ + LI ++ FPE+F L + + E R +
Sbjct: 1037 SRK--LLNFWEFSHATLDLIISFKSTFPELFNDLTKEGPKITSAENILMNMTSENRSLLL 1094
Query: 1081 AQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAV--DTCEKVEKQITLFVKPNKLYI 1138
+ +W+KE E+ P + + VV IE V + EK+ F Y+
Sbjct: 1095 QKARTWIKENT-KDLELVPVTSKQLSGSVVREIELIVQKQKSDNSEKKPLRFSNIISQYL 1153
Query: 1139 PKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMY-DVVFDK 1197
P + + F L D+V I VP G GT+I + T +Y DV+FD
Sbjct: 1154 LNPYESSILLETQN-FLLGDKVRYILKSGLVPEGSIGTVISL---RTVAKLLYIDVLFDD 1209
Query: 1198 PFPHG 1202
F G
Sbjct: 1210 EFLGG 1214
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 95/133 (71%), Gaps = 4/133 (3%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI---TE 57
MG+PKFFRYI ER+P + +++ +PEFDNLYLDMN I+H+CSH + D I TE
Sbjct: 1 MGIPKFFRYICERWPLILQLIENDNVPEFDNLYLDMNSILHSCSHGDRGDTEGIIKPLTE 60
Query: 58 KQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 117
++IF IF YI+ LF++I+PKK+F+MAIDGVAPRAKMNQQR RRFR+A E E K E
Sbjct: 61 EEIFTRIFIYIDHLFQLIKPKKVFYMAIDGVAPRAKMNQQRSRRFRTAMENEKAMNKIIE 120
Query: 118 KGERLPTE-KRFD 129
G + E K FD
Sbjct: 121 NGGVISEEIKPFD 133
>gi|406603016|emb|CCH45428.1| 5'-3' exoribonuclease 2 [Wickerhamomyces ciferrii]
Length = 940
Score = 296 bits (758), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 170/451 (37%), Positives = 247/451 (54%), Gaps = 99/451 (21%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP----------EFDNLYLDMNGIIHN 42
MGVP F+R++S +YP + + VV +P E DNLYLDMNGI+H
Sbjct: 1 MGVPAFYRWLSRKYPKIISPTLEEDATVVDGVTVPPSYSNPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +F Y + + M +P+K+ +A+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENRPPP--ETEDEMLLAVFEYTDRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++A++ +++ +QR +
Sbjct: 119 RSARDAKIQDEE------------------------------------------RQRLQD 136
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
R EV+++ K K K +DSN ITPGTPFM +L LRY+ K+++D
Sbjct: 137 LREGY-GEVIDEAVKVK-------KTWDSNAITPGTPFMDKLALALRYWTAYKLSSDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WKD+ VI+S PGEGEHKIM+++R +S +YNPN +H +YGLDADLI L
Sbjct: 187 -------GWKDLQVIISDATVPGEGEHKIMNFVRSQRSDIEYNPNTKHAIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEVKFNTKSNKGGS------------QIVTPEETK--FFLLHLSLMR 328
GL THEP+F +LRE+V + NK S +++ +E+K F L+++++R
Sbjct: 240 GLATHEPHFRVLREDVF--ARDNKMMSVQEKMNLSEEHRKLIEEKESKKPFLWLNINVLR 297
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
+YLE+E + P F F +E IDDWV M F GNDF+P+LP L + + ++ LL +
Sbjct: 298 EYLEIELNIPRLP----FKFDLERAIDDWVFMCFFCGNDFLPHLPSLDVRDNSIDLLVSI 353
Query: 389 YQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
+++VLP + YI G LNL+ E L+ LA
Sbjct: 354 WKQVLPKMKSYITCDGILNLENVEVLLSNLA 384
Score = 162 bits (409), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 97/135 (71%)
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVL 592
YI I W L YYY GC SW+WYYP+HYAP+ D + L++K+ G+PFLP++QL++VL
Sbjct: 592 YIEGISWVLLYYYQGCPSWNWYYPYHYAPFAQDFTNIKDLDIKFTQGKPFLPYEQLMSVL 651
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAM 652
PAAS LPE ++ LM+ +SPI+++YPE+F D+NGKK W+ +VL+PFIDE +L++ +
Sbjct: 652 PAASGHNLPEIFRPLMSDADSPIIDFYPEDFPIDMNGKKMSWQGIVLLPFIDEKRLLEVV 711
Query: 653 DAVEHLLTDEERSRN 667
LTD E+ RN
Sbjct: 712 RDQYPKLTDAEKGRN 726
>gi|225681905|gb|EEH20189.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb03]
Length = 1044
Score = 296 bits (758), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 175/477 (36%), Positives = 250/477 (52%), Gaps = 113/477 (23%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S VV E ++P E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISSVVEELPQEINGQEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P E+++ +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPP--PSNEEEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA+ + EK+ +F L + +Q G+
Sbjct: 119 FRSAQEAKEAD------------EKKVEFAKL---------------------LRKQNGK 145
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ E++E+ T K +DSN ITPGTPFM L LRY+V K+ TD
Sbjct: 146 K----SCEEIVEEV---------TMKTWDSNVITPGTPFMDILAAALRYWVAYKLNTDP- 191
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + VI+S PGEGEHKIM++IR +S P+++PN RH +YGLDADLIM
Sbjct: 192 --------AWEKLKVIISDATVPGEGEHKIMEFIRSQRSCPEHDPNTRHVIYGLDADLIM 243
Query: 282 LGLCTHEPYFSLLREEVKFNTKSN-----------------------------KGGSQIV 312
LGL THEP+F +LRE+V F KG +
Sbjct: 244 LGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKGKGSSL 303
Query: 313 TPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
P F LH+S++R+YL +E ++P FPF +E +DDWV M F +GNDF+P+L
Sbjct: 304 KP----FIWLHVSVLREYLAVEMHVPQQP----FPFDLERALDDWVFMCFFVGNDFLPHL 355
Query: 373 PDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
P L I + L ++++ +P + GY+ + G+++L R + L LA + FR +
Sbjct: 356 PSLDIRENGIDTLIAIWRDNIPAMGGYLTKDGHVDLNRAQLILQGLAKQEDAIFRRR 412
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 101/160 (63%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D
Sbjct: 583 YYEQKFQVHPKDIEFRHKVARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVGLG 642
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+N+++ G PF PF+QL+ VLPAAS +PE + +LM+ NS I+++YPEEF DLNGK
Sbjct: 643 KMNIEFNRGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPNSEIIDFYPEEFPIDLNGK 702
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V L+PFIDE +L+ AM+ HLL+ EE +RN G
Sbjct: 703 KFAWQGVALLPFIDEKRLLVAMEKRYHLLSSEEHARNSTG 742
>gi|347837816|emb|CCD52388.1| similar to 5'-3' exoribonuclease 2 [Botryotinia fuckeliana]
Length = 966
Score = 295 bits (756), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 180/473 (38%), Positives = 250/473 (52%), Gaps = 110/473 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ--------IP-----------EFDNLYLDMNGIIH 41
MGVP FR+++++YP + V E Q IP E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLTKQYPKIVSPVIEEQPREIDGQIIPIDIRGPNPNGEECDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
CSHP D P E+++ +IF Y + + M++P+KL +AIDGVAPRAKMNQQR RR
Sbjct: 61 PCSHPEDRPPP--KDEEEMMLEIFKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA ++KA++K E L KM + +G
Sbjct: 119 FRSAQEA---KEKAEDKAELL-------------------------------KMLKSQGS 144
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+E EV +K +DSN ITPGTPFM L LRY++ K+ TD
Sbjct: 145 HI---EETEV--------------KKAWDSNEITPGTPFMDILALSLRYWIAYKLNTDP- 186
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W + VI+S PGEGEHKIM+++R +S PD+NPN RH +YGLDADLIM
Sbjct: 187 --------AWAKMKVIISDSTVPGEGEHKIMEFVRSQRSSPDHNPNTRHVMYGLDADLIM 238
Query: 282 LGLCTHEPYFSLLREEVKFN----------------TKSNKGGSQI---------VTPEE 316
LGL THEP+F +LRE+V FN + KG +I P
Sbjct: 239 LGLATHEPHFRILREDVFFNDGKPRTCKLCGQHGHEARECKGMYKIKDGEFDEKASAPTL 298
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F LH+S++R+YL E +P F F +E +DDWV M F +GNDF+P+LP L
Sbjct: 299 KPFIWLHVSVLREYLAAEMYVPSQP----FRFDLERALDDWVFMCFFVGNDFLPHLPSLE 354
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I + L ++++ +P + GY+ + G+++L+R + L LA + FR++
Sbjct: 355 IREDGINTLIAIWRDNIPYMGGYLTKDGHVDLERAQFILDGLAKQEDAIFRKR 407
Score = 155 bits (391), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 99/160 (61%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K + E + Y+ + W L YY+ GC SW WYYP+HYAP+ +D +
Sbjct: 575 YYEQKFNRDPKDIEFRHEVGRAYVEGLAWVLLYYFQGCPSWDWYYPYHYAPFAADFANLK 634
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ + ++ G F PF+QL+ VLPAAS++ +PE + +LMT E+S I+++YPE+F DLNGK
Sbjct: 635 DMKIDFQKGRIFRPFEQLMGVLPAASRQAIPEQFHHLMTNEDSEIIDFYPEDFVVDLNGK 694
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V L+PFID +L+ AM V L ++ +RN G
Sbjct: 695 KFAWQGVALLPFIDSERLLDAMAKVYPTLPEDVSARNGLG 734
>gi|405121347|gb|AFR96116.1| 5'-3' exoribonuclease 2 [Cryptococcus neoformans var. grubii H99]
Length = 1129
Score = 295 bits (756), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 184/482 (38%), Positives = 248/482 (51%), Gaps = 115/482 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE-------------------YQIP-----EFDNLYLDM 36
MGVP FR++S++YP + E V+E Y+ P E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM 60
Query: 37 NGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQ 96
NGI+H C+HP + P TE+++ +IF Y E + M +P+K+ MAIDGVAPRAKMNQ
Sbjct: 61 NGIVHPCTHP-EGRPAPE-TEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQ 118
Query: 97 QRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMN 156
QR RRFR+A+EA E++ KE KLF
Sbjct: 119 QRSRRFRAAQEAADKEEERKEA--------------------IKLF-------------- 144
Query: 157 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKI 216
E E K +D+N ITPGTPFM L L+Y+V K+
Sbjct: 145 ----------------EAMGHAVSEETANHKSWDTNAITPGTPFMDLLSISLKYWVSHKL 188
Query: 217 TTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLD 276
TTD WKD+ +ILS PGEGEHKIMD+IR +S P ++ N H +YGLD
Sbjct: 189 TTDP---------GWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLD 239
Query: 277 ADLIMLGLCTHEPYFSLLREEV--------------------KFNTKSNKGGS-----QI 311
ADLIML L THEP+F +LRE+V N KS+K ++
Sbjct: 240 ADLIMLSLATHEPHFRVLREDVFAQSSKGPPACKNCGKVGHIAANCKSDKKVKDPNVVEV 299
Query: 312 VTPEETK-FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
E+ K F L ++ +R+YL +E L PGV FPF +E IDDW+ M F +GNDF+P
Sbjct: 300 AKTEDPKPFIFLDVACLREYLAIE---LVVPGV-PFPFDLELAIDDWIFMIFFVGNDFLP 355
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP L I GA+ +L K+++ LP + GY+ G +NL R + L LA + E F+++
Sbjct: 356 HLPSLEIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRK 415
Query: 431 AD 432
D
Sbjct: 416 DD 417
Score = 167 bits (422), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 106/169 (62%)
Query: 507 HKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI 566
++ YY K E + + Y+ + W L YYY G +W W+YP+HYAP+ D
Sbjct: 695 YRERYYEKKFGVKLSEREFIDKVTKSYMEGLCWVLEYYYQGVPAWDWFYPYHYAPFAQDF 754
Query: 567 KDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+D +++K+E PF PF QLL V PAAS+ LPEP Q LM E+SPIL++YP +F D
Sbjct: 755 RDVGSMDIKFETSIPFKPFAQLLGVFPAASRIHLPEPLQTLMIDEDSPILDFYPPDFEID 814
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
+NGKK W+ V L+PFID+ +L+ A+ + E LL+D+E+ RN G +++
Sbjct: 815 MNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDEKRRNSWGDNVMF 863
>gi|321260270|ref|XP_003194855.1| strand exchange protein (5'-3' exoribonuclease) [Cryptococcus
gattii WM276]
gi|317461327|gb|ADV23068.1| Strand exchange protein (5'-3' exoribonuclease), putative
[Cryptococcus gattii WM276]
Length = 1129
Score = 295 bits (756), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 183/482 (37%), Positives = 247/482 (51%), Gaps = 115/482 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE-------------------YQIP-----EFDNLYLDM 36
MGVP FR++S++YP + E V+E Y+ P E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM 60
Query: 37 NGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQ 96
NGI+H C+HP + P TE+++ +IF Y E + M +P+K+ MAIDGVAPRAKMNQ
Sbjct: 61 NGIVHPCTHP-EGRPAPE-TEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQ 118
Query: 97 QRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMN 156
QR RRFR+A+EA E++ KE KLF
Sbjct: 119 QRSRRFRAAQEAADKEEERKEA--------------------VKLF-------------- 144
Query: 157 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKI 216
E E K +D+N ITPGTPFM L L+Y+V K+
Sbjct: 145 ----------------EAMGHTVSEETANRKSWDTNAITPGTPFMDLLSISLKYWVSYKL 188
Query: 217 TTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLD 276
TTD WKD+ +ILS PGEGEHKIMD+IR +S P ++ N H +YGLD
Sbjct: 189 TTDP---------GWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLD 239
Query: 277 ADLIMLGLCTHEPYFSLLREEVKFNTKSN-----------------KGGSQIVTP----- 314
ADLIML L THEP+F +LRE+V + KG ++ P
Sbjct: 240 ADLIMLSLATHEPHFRVLREDVFAQSSKGPPACKNCGKVGHIAANCKGDKKVKDPNVVEV 299
Query: 315 ---EETK-FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
E+ K F L ++ +R+YL +E L PGV FPF +E IDDW+ M F +GNDF+P
Sbjct: 300 AKTEDPKPFIFLDVACLREYLAIE---LVVPGV-PFPFDLELAIDDWIFMIFFVGNDFLP 355
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP L I GA+ +L K+++ LP + GY+ G +NL R + L LA + E F+++
Sbjct: 356 HLPSLEIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRK 415
Query: 431 AD 432
D
Sbjct: 416 DD 417
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 110/187 (58%), Gaps = 7/187 (3%)
Query: 489 YSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGC 548
Y D+ + W + + YY K E + + Y+ + W L YYY G
Sbjct: 687 YEDDIKLWEPGY-------RERYYEKKFGVKLSEREFIDKVTKSYMEGLCWVLEYYYQGV 739
Query: 549 VSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLM 608
+W W+YP+HYAP+ D + +++K+E PF PF QLL V PAAS+ LPEP Q LM
Sbjct: 740 PAWDWFYPYHYAPFAQDFRSVGSMDIKFETSMPFKPFAQLLGVFPAASRIHLPEPLQTLM 799
Query: 609 TLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
E+SPIL++YP +F D+NGKK W+ V L+PFID+ +L+ A+ + E LL+D+E+ RN
Sbjct: 800 IDEDSPILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDEKRRNS 859
Query: 669 HGPMLVY 675
G +++
Sbjct: 860 WGDNVMF 866
>gi|90078106|dbj|BAE88733.1| unnamed protein product [Macaca fascicularis]
Length = 417
Score = 295 bits (755), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/377 (42%), Positives = 231/377 (61%), Gaps = 21/377 (5%)
Query: 500 FFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHY 559
F +EF Q+K YY K+ V+++ L DQA CY++AIQW LHYYY+G SWSWYYP+HY
Sbjct: 18 FETEFRQYKRTYYMTKMGVDIVSDDFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHY 77
Query: 560 APYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYY 619
AP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP YQ+LMT E+SPI+EYY
Sbjct: 78 APFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYY 137
Query: 620 PEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSN 679
P +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L EER RN+H L+ Y
Sbjct: 138 PPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLMCWYDR 197
Query: 680 VN--LGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLK 737
+ + P+ FPAI K + D V NK + + LY FPTLK
Sbjct: 198 DTEFVYPSPWPEKFPAIERCCTRYKIISLDAWRVDINK--NKITRVDQKALYFCGFPTLK 255
Query: 738 HVQFTHKIENAKVKVFQQPSRNESI---IIVQDKVQVPSLKQVADQILGKTIFINYPHLI 794
H++ ++ + V+VFQQ SR E++ I+V + +++ VA +LGK++F+N+PHL
Sbjct: 256 HIKHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTIENVASSVLGKSVFVNWPHLE 315
Query: 795 EIRVQAVATKDSRISFDKNSGP-------------VFERAAKDMQDAFQLSKKSITDGYY 841
E RV AV+ +++ ++ G V K+ Q + + I++ Y
Sbjct: 316 EARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGDKE-QSNWAKEVQGISEHYL 374
Query: 842 TKLGVDIGNTEVLVYGQ 858
+ G+ I T +VY Q
Sbjct: 375 RRKGIIINETSGVVYAQ 391
>gi|261332676|emb|CBH15671.1| 5'-3' exoribonuclease 2, putative [Trypanosoma brucei gambiense
DAL972]
Length = 801
Score = 295 bits (754), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 206/693 (29%), Positives = 325/693 (46%), Gaps = 125/693 (18%)
Query: 1 MGVPKFFRYISERYP--------CLSEVV-------REY-QIPEFDNLYLDMNGIIHNCS 44
MG+ F+ ++ Y C+ E +EY Q +FDNLYLD+NG++H C
Sbjct: 1 MGIAGFYLWLKRWYASCMEDVPQCVVEAASKSSPPPKEYMQSHKFDNLYLDLNGLVHPCC 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
H + + +E+++F+ +F I+++F++++P+K + +DGVAP++KMNQQR RRFR+
Sbjct: 61 H-DTSPLPEPESEEEMFERVFTQIDLVFKVVRPRKCLILCVDGVAPQSKMNQQRSRRFRA 119
Query: 105 AKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFR 164
A+E + +GE +
Sbjct: 120 AEE--------RAEGEVM------------------------------------------ 129
Query: 165 SAKEAEVLEQKAKEKGERLP-TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWK 223
SAK A+VL EKG P +R+D N ITP TPFM RL + +FV K+ D L
Sbjct: 130 SAKCADVL----LEKGLPYPKVRERWDHNVITPSTPFMERLGLAIEWFVVKKVNEDPL-- 183
Query: 224 DTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLG 283
WK V V+ S PGEGEHKIM YIR ++ +P Y+P+ H +YG+DADLI LG
Sbjct: 184 -------WKKVAVVFSDAHVPGEGEHKIMQYIRGLRMQPGYDPDTSHVIYGMDADLISLG 236
Query: 284 LCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGV 343
L THE ++LR ++ + G KF L R+ L+ +F +KE
Sbjct: 237 LSTHEKSVTILRNQLNETFNAAHG----------KFCYFSLVKFRECLKRDFDGIKE--- 283
Query: 344 LSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEG 403
S E ++DD++ + F +GNDF+P++P + I + LL Y + Y+ +G
Sbjct: 284 ----MSFERVVDDFIFLCFFVGNDFLPHVPLISIKTRGVELLLDHYVNEFAS-HSYLTDG 338
Query: 404 GYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFH---KEKSKEMDPDL 460
G + K FL + F Y + E G++ + E+ + +L
Sbjct: 339 GEVRFKALSSFLAR--------FLNDYGSVLRDESSFGERAKERGRGNVAERVNKYQVEL 390
Query: 461 AALIKATDDD------YDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHY 514
++ + D D +++ A E + + + E ++ YY
Sbjct: 391 KKVLASVKRDKTNAQEVSDTAHKLMVSALKERVSFVGDKGSLGFTYHDE--DYRDKYYQK 448
Query: 515 KLDY-----AKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF 569
K + +K V R AE Y+R QW + YY +GC SW+W+YP+HYAP + D+ F
Sbjct: 449 KFGWDPEKRSKFEKRVKRCCAE-YLRGTQWVMRYYTSGCPSWNWFYPYHYAPLLDDLARF 507
Query: 570 S-HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLN 628
+ +++++E G P P QLLAVLP S LP + NS +YP+ D +
Sbjct: 508 TDSVDVEFERGTPRHPVVQLLAVLPRMSVGGLPVELHGAVLDPNSVFGPFYPDHVDVDYS 567
Query: 629 GKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTD 661
++ V+ +PFID ++ A D + L D
Sbjct: 568 EAIFAYQGVLRLPFIDCKEIEAACDTLVELQPD 600
>gi|396493104|ref|XP_003843954.1| hypothetical protein LEMA_P016050.1 [Leptosphaeria maculans JN3]
gi|312220534|emb|CBY00475.1| hypothetical protein LEMA_P016050.1 [Leptosphaeria maculans JN3]
Length = 1096
Score = 295 bits (754), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 174/479 (36%), Positives = 252/479 (52%), Gaps = 111/479 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIP--------------------EFDNLYLDMNGII 40
MGVP FR++S++YP + V+E ++P EFDNLYLDMNGI+
Sbjct: 1 MGVPAMFRWLSQKYPKIVSTVQE-ELPKKVGDEIIPVDRCGPNPNGEEFDNLYLDMNGIV 59
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H CSHP D TE + IF Y + M++P+KL +MA+DGVAPRAKMNQQR R
Sbjct: 60 HPCSHPEDK--AAPKTEADMMMAIFEYTDRCVGMVRPRKLLYMAVDGVAPRAKMNQQRSR 117
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFRSA+EA +K E+ E F K L Q+
Sbjct: 118 RFRSAREA---AEKDVERAE----------------FQKVL--------------TAQKA 144
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
R ++ LEQ EK +DSN ITPGTPFM L + L+Y+ K TTD
Sbjct: 145 SR---GEDVTSLEQV---------VEKTWDSNAITPGTPFMHLLAESLQYWCAYKFTTDP 192
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
WKD+ VI+S PGEGEHKIM++IR +S P ++PN H +YGLDADLI
Sbjct: 193 ---------SWKDMKVIISDSSVPGEGEHKIMNFIRSQRSMPTHDPNTSHVIYGLDADLI 243
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVT----------PEETK------------ 318
ML L THEP+F +LRE+V +++ +K ++ P++ K
Sbjct: 244 MLSLATHEPHFRVLREDVFYDSGKDKTCTRCGRKGHIRNNCEFPDDGKKLTEEEAAEEWA 303
Query: 319 --------FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
F LH +++R+YL +E K F + +E +DDWV M F +GNDF+P
Sbjct: 304 NSEHQLKPFIWLHTNILREYLAVEMDTPKR----KFKYDLERSLDDWVFMCFFVGNDFLP 359
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
+LP L I + + LL +++++ +D Y+ + G+ +++R ++ L+ LAS + + F+++
Sbjct: 360 HLPSLEIRDQGIDLLISIWRDLAAEMDDYVTKDGFPDMRRVQQILSALASREADIFKKR 418
Score = 149 bits (376), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 93/143 (65%), Gaps = 2/143 (1%)
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLK--YEMGEPFLPFQQ 587
A Y + W L YY GC SW+WY+PHHYAP+ +D ++ + +E G F P++Q
Sbjct: 614 ARQYAEGLCWVLAYYMQGCPSWTWYFPHHYAPFAADFVGLEDMDPRKLFEKGTVFHPYEQ 673
Query: 588 LLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVK 647
L+ VLPAAS +PEP++ LM+ +SPI+++YP +F DLNGKK W+ V ++PFIDE +
Sbjct: 674 LMGVLPAASNHAIPEPFRPLMSDADSPIIDFYPVDFPIDLNGKKFAWQGVAILPFIDEKR 733
Query: 648 LIKAMDAVEHLLTDEERSRNRHG 670
L+ AM LTD+ER RN G
Sbjct: 734 LLAAMATKYPELTDDERKRNEFG 756
>gi|134113168|ref|XP_774609.1| hypothetical protein CNBF2890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819738|sp|P0CL89.1|XRN2_CRYNB RecName: Full=5'-3' exoribonuclease 2
gi|50257253|gb|EAL19962.1| hypothetical protein CNBF2890 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1130
Score = 294 bits (753), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 249/482 (51%), Gaps = 115/482 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE-------------------YQIP-----EFDNLYLDM 36
MGVP FR++S++YP + E V+E Y+ P E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM 60
Query: 37 NGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQ 96
NGI+H C+HP + P TE+++ +IF Y E + M +P+K+ MAIDGVAPRAKMNQ
Sbjct: 61 NGIVHPCTHP-EGRPAPE-TEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQ 118
Query: 97 QRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMN 156
QR RRFR+A+EA E++ +E KLF
Sbjct: 119 QRSRRFRAAQEAADKEEERREA--------------------IKLF-------------- 144
Query: 157 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKI 216
E E K +D+N ITPGTPFM L L+Y+V K+
Sbjct: 145 ----------------EAMGHAVSEETANHKSWDTNAITPGTPFMDLLSISLKYWVSHKL 188
Query: 217 TTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLD 276
TTD WKD+ +ILS PGEGEHKIMD+IR +S P ++ N H +YGLD
Sbjct: 189 TTDP---------GWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLD 239
Query: 277 ADLIMLGLCTHEPYFSLLREEV--------------------KFNTKSNK-----GGSQI 311
ADLIML L THEP+F +LRE+V N KS+K +++
Sbjct: 240 ADLIMLSLATHEPHFRVLREDVFAQSSKGPHACKNCGKVGHIAANCKSDKKFKDPNVAEV 299
Query: 312 VTPEETK-FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
E+ K F L ++ +R+YL +E L PG + FPF +E IDDW+ M F +GNDF+P
Sbjct: 300 AKTEDPKPFIFLDVACLREYLAVE---LVVPG-MPFPFDLELAIDDWIFMIFFVGNDFLP 355
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP L I GA+ +L K+++ LP + GY+ G +NL R + L LA + E F+++
Sbjct: 356 HLPSLEIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRK 415
Query: 431 AD 432
D
Sbjct: 416 DD 417
Score = 167 bits (423), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 111/187 (59%), Gaps = 7/187 (3%)
Query: 489 YSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGC 548
Y D+ + W + + YY K E + + Y+ + W L YYY G
Sbjct: 685 YEDDVKLWEPGY-------RERYYEKKFGVKLSEREFIDKVTKSYMEGLCWVLEYYYQGV 737
Query: 549 VSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLM 608
+W W+YP+HYAP+ D +D +++K+E PF PF QLL V PAAS+ LPEP Q LM
Sbjct: 738 PAWDWFYPYHYAPFAQDFRDVGSMDIKFETSIPFKPFAQLLGVFPAASRIHLPEPLQTLM 797
Query: 609 TLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
E+SPIL++YP +F D+NGKK W+ V L+PFID+ +L+ A+ + E LL+D+E+ RN
Sbjct: 798 IDEDSPILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDEKRRNS 857
Query: 669 HGPMLVY 675
G +++
Sbjct: 858 WGDNVMF 864
>gi|58268722|ref|XP_571517.1| 5'-3' exoribonuclease [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819739|sp|P0CL88.1|XRN2_CRYNJ RecName: Full=5'-3' exoribonuclease 2
gi|57227752|gb|AAW44210.1| 5'-3' exoribonuclease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1127
Score = 294 bits (753), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 249/482 (51%), Gaps = 115/482 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE-------------------YQIP-----EFDNLYLDM 36
MGVP FR++S++YP + E V+E Y+ P E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM 60
Query: 37 NGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQ 96
NGI+H C+HP + P TE+++ +IF Y E + M +P+K+ MAIDGVAPRAKMNQ
Sbjct: 61 NGIVHPCTHP-EGRPAPE-TEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQ 118
Query: 97 QRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMN 156
QR RRFR+A+EA E++ +E KLF
Sbjct: 119 QRSRRFRAAQEAADKEEERREA--------------------IKLF-------------- 144
Query: 157 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKI 216
E E K +D+N ITPGTPFM L L+Y+V K+
Sbjct: 145 ----------------EAMGHAVSEETANHKSWDTNAITPGTPFMDLLSISLKYWVSHKL 188
Query: 217 TTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLD 276
TTD WKD+ +ILS PGEGEHKIMD+IR +S P ++ N H +YGLD
Sbjct: 189 TTDP---------GWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLD 239
Query: 277 ADLIMLGLCTHEPYFSLLREEV--------------------KFNTKSNK-----GGSQI 311
ADLIML L THEP+F +LRE+V N KS+K +++
Sbjct: 240 ADLIMLSLATHEPHFRVLREDVFAQSSKGPHACKNCGKVGHIAANCKSDKKFKDPNVAEV 299
Query: 312 VTPEETK-FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
E+ K F L ++ +R+YL +E L PG + FPF +E IDDW+ M F +GNDF+P
Sbjct: 300 AKTEDPKPFIFLDVACLREYLAVE---LVVPG-MPFPFDLELAIDDWIFMIFFVGNDFLP 355
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP L I GA+ +L K+++ LP + GY+ G +NL R + L LA + E F+++
Sbjct: 356 HLPSLEIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRK 415
Query: 431 AD 432
D
Sbjct: 416 DD 417
Score = 167 bits (422), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 111/187 (59%), Gaps = 7/187 (3%)
Query: 489 YSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGC 548
Y D+ + W + + YY K E + + Y+ + W L YYY G
Sbjct: 685 YEDDVKLWEPGY-------RERYYEKKFGVKLSEREFIDKVTKSYMEGLCWVLEYYYQGV 737
Query: 549 VSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLM 608
+W W+YP+HYAP+ D +D +++K+E PF PF QLL V PAAS+ LPEP Q LM
Sbjct: 738 PAWDWFYPYHYAPFAQDFRDVGSMDIKFETSIPFKPFAQLLGVFPAASRIHLPEPLQTLM 797
Query: 609 TLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
E+SPIL++YP +F D+NGKK W+ V L+PFID+ +L+ A+ + E LL+D+E+ RN
Sbjct: 798 IDEDSPILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDEKRRNS 857
Query: 669 HGPMLVY 675
G +++
Sbjct: 858 WGDNVMF 864
>gi|403171712|ref|XP_003330904.2| hypothetical protein PGTG_12441 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169305|gb|EFP86485.2| hypothetical protein PGTG_12441 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 751
Score = 294 bits (753), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/308 (47%), Positives = 203/308 (65%), Gaps = 18/308 (5%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT-EKRFDSNCITP 196
PKKLFFMA+DGVAPRAKMN+QR RRF++A+ + + Q+ + R T FDSNCITP
Sbjct: 78 PKKLFFMAVDGVAPRAKMNEQRSRRFKAAQANQTMLQRNAFR--RFQTVSNSFDSNCITP 135
Query: 197 GTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIR 256
GTPFM RLH+QL+YF+ K+T D W+ V VI SGH+ PGEGEHKIM+YIR
Sbjct: 136 GTPFMARLHEQLKYFINKKVTEDP---------AWQAVQVIFSGHDVPGEGEHKIMEYIR 186
Query: 257 YMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEE 316
K++ DY+P++RHC+YGLDADLIML L +HEP+F LLREE + K + ++
Sbjct: 187 RAKTQQDYSPHIRHCIYGLDADLIMLALLSHEPHFCLLREENRAPLKRKP----TINLKD 242
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
+F L +SL RDYL EF L+ + +F + I IIDD++L+ +GNDF+P+LP+LH
Sbjct: 243 QQFHLFQISLFRDYLNWEFSSLQL--IKNFKYDIRRIIDDFILLCIFVGNDFLPHLPNLH 300
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL 436
I +GA+ +L+K+Y+++LP GY+N+ G L+ R + L +L S +++ F Q
Sbjct: 301 IDDGAIGVLFKIYKKILPQAGGYLNDSGTLHTHRLQLLLDELVSHEYQHFETSTGSNQKC 360
Query: 437 EGKMGKKF 444
G G F
Sbjct: 361 VGIPGTNF 368
Score = 179 bits (453), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 131/233 (56%), Gaps = 13/233 (5%)
Query: 472 DDGTEEVL--------NYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTN 523
D TEE+L N+ Y D++ +F + Q K+ YY K++ +
Sbjct: 481 DSCTEEILRKIKRTPGNWGMYGRKPPKQSDDD---DFHAYLKQWKSKYYKNKMELQYNDS 537
Query: 524 EVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFL 583
L Y+ +QW L YYY G SWSW YP+HYAP +SD+ + +E+G PF
Sbjct: 538 VQLHKLTHAYVEGLQWILQYYYTGVASWSWAYPYHYAPMVSDLNKVASYKFSFELGSPFK 597
Query: 584 PFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFI 643
PF+QL+ VLP S +P +Q+LMT +SPIL+ YP F TDLNGK+ +W+A+ IPFI
Sbjct: 598 PFEQLMGVLPGLSSTHVPSAFQDLMTKPDSPILDLYPTSFETDLNGKRHEWQAIAKIPFI 657
Query: 644 DEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVN--LGTALAPDYFPAI 694
D +L++AM A E+ L DEE RNR GP + Y+ ++ +L P YFP +
Sbjct: 658 DSRRLLEAMKAHEYKLKDEEIERNRFGPTWQFRYTPLSPTYYRSLLPSYFPDL 710
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
Query: 1 MGVPKFFRYISERYPC-LSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MG+PKFFR+++++YP L +V++ IPE DNLYLDMNGIIHNCSHP+ F+ITE +
Sbjct: 1 MGIPKFFRWMTQKYPVVLHQVIQGDCIPEIDNLYLDMNGIIHNCSHPSTPTADFQITEPE 60
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQK 114
IF IF +E LF + +PKKLFFMA+DGVAPRAKMN+QR RRF++A+ + + Q+
Sbjct: 61 IFSGIFAALEHLFTLAKPKKLFFMAVDGVAPRAKMNEQRSRRFKAAQANQTMLQR 115
>gi|242774442|ref|XP_002478441.1| 5'->3' exoribonculease Dhp1 [Talaromyces stipitatus ATCC 10500]
gi|218722060|gb|EED21478.1| 5'->3' exoribonculease Dhp1 [Talaromyces stipitatus ATCC 10500]
Length = 1042
Score = 294 bits (753), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 175/473 (36%), Positives = 245/473 (51%), Gaps = 102/473 (21%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ--------IP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP + V E Q IP E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEQPYEVNGEVIPVDTTKPNPNGEETDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P E+++ +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPPP--ANEQEMMLEIFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA +QK +E F K L A+ N +G
Sbjct: 119 FRSAQEARENDQKKEE-------------------FQKLL-----------ARQNAAKGI 148
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ E +V+ +K +DSN ITPGTPFM L LRY++ K+ TD
Sbjct: 149 DPDNNLEEQVI-------------KKTWDSNVITPGTPFMDILSASLRYWISYKLNTDP- 194
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + +I+S PGEGEHK+M++IR + P ++PN RH LYGLDADLIM
Sbjct: 195 --------AWEKLKIIISDATVPGEGEHKVMNFIRSQRQDPSHDPNTRHVLYGLDADLIM 246
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKG----GSQIVTPEETK------------------- 318
LGL THEP+F +LRE+V F + G EE +
Sbjct: 247 LGLATHEPHFRVLREDVFFQESKPRTCRLCGQTGHKAEECRGQAKEKNGEFDEKQKAAVL 306
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F L++S++R+YL +E ++ FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 307 KPFIWLNVSVLREYLAIELQVPQQ----RFPFDLERALDDWVFMCFFVGNDFLPHLPSLD 362
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I A+ LL +++E +P +D Y+ + G +N K + LT L + FR +
Sbjct: 363 IKENAIDLLISIWRENIPLMDDYVTKDGIVNFKHAQLILTGLGKQEEAIFRRR 415
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 100/160 (62%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y +QW L YY GC SW+WYYP+HYAP+ SD D
Sbjct: 610 YYEQKFHVDPSNVEFRHQVARSYAEGLQWVLLYYMQGCPSWTWYYPYHYAPFASDFVDIG 669
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ + G+PF PF+QL+ VLPA+S +PE + +LM+ NS I+++YPE+F DLNGK
Sbjct: 670 DMKPNFVKGKPFKPFEQLMGVLPASSNHAIPEIFHDLMSDPNSEIIDFYPEDFPVDLNGK 729
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ VVL+PFIDEV+L+ AM+ LL+ +E +RN G
Sbjct: 730 KFAWQGVVLLPFIDEVRLLAAMEKKYPLLSADEHARNTVG 769
>gi|408399376|gb|EKJ78479.1| hypothetical protein FPSE_01288 [Fusarium pseudograminearum CS3096]
Length = 980
Score = 294 bits (753), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 177/474 (37%), Positives = 248/474 (52%), Gaps = 106/474 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ---------IP-----------EFDNLYLDMNGII 40
MG+P FR++S RYP + V E Q IP EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTRYPKIISPVIEDQPLVMEDGSTIPVDTTRPNPNGEEFDNLYLDMNGIV 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H CSHP D E+++ ++F Y + + M++P+K+ +A+DGVAPRAKMNQQR R
Sbjct: 61 HPCSHPEDRPA--PTDEEEMMMEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFRSA+EA+ EQ +E L M + QQ G
Sbjct: 119 RFRSAQEAQEKEQDKQE-----------------------LIKM----------LKQQNG 145
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
+ E LE T+K FDSN ITPGTPFM L LRY+ + K+ TD
Sbjct: 146 GNLST----ESLETV---------TKKAFDSNSITPGTPFMDILALSLRYWCQYKLNTDP 192
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W + +I+S PGEGEHKIM+++R ++ PD++PN RH +YGLDADLI
Sbjct: 193 ---------GWAKLKIIISDATVPGEGEHKIMNFVRSQRASPDHDPNTRHVIYGLDADLI 243
Query: 281 MLGLCTHEPYFSLLREEVKFNTK--------SNKG-GSQIVTPEETK------------- 318
MLGL THEP+F +LRE+V F + KG +Q EE K
Sbjct: 244 MLGLATHEPHFRVLREDVFFQDQKARLCKICGQKGHDAQNCRGEEKKKDGEHDEKDKGVA 303
Query: 319 ---FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
F LH++++R+YL +E G P F F +E +DDW+ M +GNDF+P+LP L
Sbjct: 304 LKPFIWLHVAVLREYLAVELGVPNLP----FRFDLERAVDDWIFMCCFVGNDFLPHLPAL 359
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I + L K++++ LP + GY+ + G+++L+R + L LA + F+ +
Sbjct: 360 EIREHGIDTLTKIWKDNLPVMGGYVTKDGHIDLERAQVILDGLAQQEDNIFKRR 413
Score = 146 bits (369), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E Y+ + W L YY+ GC SW WYYP+HYAP+ +D KD +
Sbjct: 573 YYEKKFHKDPKDIEFRHGVGRAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFKDIA 632
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+N+ +E G PF+QL++VLPAAS+ LPE + +LM S I+++YPE+F DLNGK
Sbjct: 633 KMNISFEKGRVSKPFEQLMSVLPAASRHALPEVFHDLMLNPESNIIDFYPEDFQIDLNGK 692
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG-PMLVYTYSNVNL 682
K W+ V L+PFI+ +L+ A+ + L+ + +RN G +L+++ + +L
Sbjct: 693 KFAWQGVALLPFIEMPRLLAAVQSKYPELSAADSARNEMGRDVLIFSEGHESL 745
>gi|403218305|emb|CCK72796.1| hypothetical protein KNAG_0L01770 [Kazachstania naganishii CBS
8797]
Length = 1003
Score = 294 bits (752), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 172/470 (36%), Positives = 246/470 (52%), Gaps = 96/470 (20%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP----------EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP + ++V ++P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEERPQIVDGVELPIDYSTENANGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +F Y + M +P+K+ MA+DGVAPRAKMNQQR RR
Sbjct: 61 CSHPENKPPP--ETEDEMLLAVFEYTHRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRL 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
AK+AE+ +K +E+ KR +
Sbjct: 119 GLAKDAELQNEKKEEE-----LRKREHY-------------------------------- 141
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
EV++ K K K +DSN ITPGTPFM +L LRY+ K+ TD
Sbjct: 142 ------GEVIDDSVKAK-------KTWDSNAITPGTPFMDKLALALRYWTAFKLATDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK++ V++S PGEGEHKIM++IR ++ P+YNPN HC+YGLDADLI L
Sbjct: 187 -------GWKNLQVVISDATVPGEGEHKIMNFIRSQRADPEYNPNTSHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEV---KFNTKSNKGGSQIVTPEETK----------FFLLHLSLMRD 329
GL THEP+F +LRE+V ++ + + +T EE + F LH+ ++R+
Sbjct: 240 GLATHEPHFKILREDVFAQEYKSSKRDIDANNMTEEERQILLKRDAEKPFLWLHIGILRE 299
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YL E + P F F +E IDDWV M F GNDF+P+LP L + ++ +L ++
Sbjct: 300 YLAAELFVPRLP----FAFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDILLDIW 355
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGK 439
++VLP++ Y+ G LNL E L +L + + + F+ KY Q E +
Sbjct: 356 KKVLPSMKTYMTCDGQLNLASVEVVLRQLGAREPDIFQTKYIQTQRNEAR 405
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 121/177 (68%), Gaps = 2/177 (1%)
Query: 507 HKTDYYHYKLDYAKVTNEVLR-DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISD 565
+K YY K + +K E LR D + YI + W L YYY GC SW+WYYP+HYAP+ +D
Sbjct: 601 YKERYYTGKFNISKDQIEPLRKDMVKSYIEGVSWVLLYYYQGCPSWNWYYPYHYAPFAAD 660
Query: 566 IKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFAT 625
D + + ++++ GEPFLP++QL++VLPAAS LP ++ LM+ +SPI+++YP+EF
Sbjct: 661 FFDINDIKVEFKQGEPFLPYEQLMSVLPAASGHTLPPIFRPLMSDVDSPIIDFYPQEFKI 720
Query: 626 DLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN-RHGPMLVYTYSNVN 681
D+NGKK W+ + L+PFIDE +L++ + A L++EER+RN R+ +L+ + N N
Sbjct: 721 DMNGKKMSWQGIALLPFIDEKRLLETVRAQYPKLSEEERARNCRNEDILLISNKNAN 777
>gi|413918977|gb|AFW58909.1| hypothetical protein ZEAMMB73_438738 [Zea mays]
Length = 795
Score = 294 bits (752), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 215/681 (31%), Positives = 329/681 (48%), Gaps = 131/681 (19%)
Query: 1 MGVPKFFRYISERYPCLSEVVREY--QIPE---FDNLYLDMNGIIHNCSHPNDNDPHFRI 55
MG+P F++++ +YP + V++ + P+ +DNLYLDMN IIH C H P ++
Sbjct: 1 MGIPSFYKWVVSKYPSIISPVKDEPEECPDGIIYDNLYLDMNCIIHCCFH-----PQDQL 55
Query: 56 TEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA 115
T I V P N EV E
Sbjct: 56 THADI--------------------------DVRPPTTAN-------------EVFESMF 76
Query: 116 KEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQK 175
E +RL + P L ++A+DGVAP AKMN+ R RF SA E + E+
Sbjct: 77 -EYMDRL----------FRIVRPTSLLYLAVDGVAPFAKMNRIRRGRFHSAME-RLAEEP 124
Query: 176 AKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
+E E D N I+PGT FM ++ + L Y+++ + +D W W+D+
Sbjct: 125 PREISEVS------DPNVISPGTEFMEKVSEALEYYIRARFNSDP--------W-WRDIM 169
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM +IR S Y+PN RHCL+G DADLIML L +HE YFS+LR
Sbjct: 170 VILSDASVPGEGEHKIMSFIRAQCSMEGYDPNTRHCLFGHDADLIMLALASHEVYFSILR 229
Query: 296 EEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIID 355
E+V + + G+ P+++ F L++ ++R+YLE+EF K+ +P + IE +ID
Sbjct: 230 EDVLYQNQEETEGN----PKKS-FLFLNMWVLREYLEIEF-KILDPVCET---DIERLID 280
Query: 356 DWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINE--------GGYLN 407
D++ + FL+GNDFIP++P L GA+ LL +VY+ + GYI G YL
Sbjct: 281 DFIFICFLMGNDFIPHIPSLKTQEGAVDLLIEVYKTTFNKMGGYITNTDKVKDKYGAYLE 340
Query: 408 LKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKAT 467
+ R E F +L+ ++ + F ++Y Q + +H+ + + + L +
Sbjct: 341 VSRLETFFHELSMYEDKIFLKRYDLKQ-------DSLLETYHEMLREAPESERPELRQKL 393
Query: 468 DDDYDDGTEEVLNYAN-YEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVL 526
DD + N N Y+ W++ FF E H+ + ++
Sbjct: 394 DD-------LLFNEENPYDSIRLGLPG--WKSRFFRE---------HFGAKTSSEIGKLQ 435
Query: 527 RDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQ 586
D A+ Y+ + W L Y+ SWSWYYP + AP++SD+K S + + + + +P PF
Sbjct: 436 NDMAQKYLEGLCWVLQCYFADVPSWSWYYPFYVAPFVSDLKGLSRIEISFTVDKPLRPFD 495
Query: 587 QLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEV 646
QL+AVLP S LP+ Y+ ++P YYP +GK W + +E+
Sbjct: 496 QLMAVLPMQSWGALPKCYEK---KRDTPF--YYP-RLVHAKDGKYFLWRGIS-----EEL 544
Query: 647 KLIKAMDAVEHLLTDEERSRN 667
+L A + V+ LT E RN
Sbjct: 545 RL-SASEMVDRKLTTLESRRN 564
>gi|115492077|ref|XP_001210666.1| 5'-3' exoribonuclease 2 [Aspergillus terreus NIH2624]
gi|114197526|gb|EAU39226.1| 5'-3' exoribonuclease 2 [Aspergillus terreus NIH2624]
Length = 1022
Score = 293 bits (751), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 169/473 (35%), Positives = 247/473 (52%), Gaps = 105/473 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S V+ E ++P E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISSVIEERPYEVNGEEVPVDTTRPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P + E+++ +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPPP--VNEQEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA ++A EK E R +Q G
Sbjct: 119 FRSAQEA----KEADEKKEEF-----------------------------RKLQAKQNGN 145
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ + EV+ +K +DSN ITPGTPFM L LRY++ K+ TD
Sbjct: 146 KADQDLQEEVI-------------QKTWDSNVITPGTPFMDILAASLRYWIAYKLNTDP- 191
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + +I+S PGEGEHKIM+++R ++ P+++PN RH +YGLDADLIM
Sbjct: 192 --------AWEKLKIIISDATVPGEGEHKIMEFVRSQRADPEHDPNTRHVIYGLDADLIM 243
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKG----GSQIVTPEETK------------------- 318
LGL THEPYF +LRE+V F + G EE +
Sbjct: 244 LGLATHEPYFRVLREDVFFQESKARTCHLCGQVGHKAEECRGRAKEKSGEFDEKQNGTSL 303
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F L++S++R+YL +E +P FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 304 KPFIWLNVSILREYLAVELHVPNQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLD 359
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I + L ++++ +P + GY+ + G+++ K+ + L LA + FR +
Sbjct: 360 IRENGIDTLIAIWRDNIPVMGGYLTKDGHVDFKKAQLILQGLAKQEDAIFRRR 412
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 100/157 (63%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y + W L YY+ GC SW+WYYP+HYAP+ +D D +
Sbjct: 591 YYEQKFGVDPEDKEFRHKVARAYAEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDIA 650
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ +E G PF PF+QL+ VLPA+S +PE + +LM +S I+++YPE+FA DLNGK
Sbjct: 651 DMIPSFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMKDPDSEIIDFYPEDFAVDLNGK 710
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
K W+ VVL+PFIDE +L+ AM+ LL+DEER RN
Sbjct: 711 KFAWQGVVLLPFIDEKRLLNAMEKKYPLLSDEERLRN 747
>gi|443899706|dbj|GAC77035.1| multidrug resistance-associated protein [Pseudozyma antarctica
T-34]
Length = 1165
Score = 293 bits (750), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 192/507 (37%), Positives = 257/507 (50%), Gaps = 115/507 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ-------------IP-----------EFDNLYLDM 36
MGVP FR++S++YP + V+E + +P EFD LYLDM
Sbjct: 1 MGVPALFRWLSKKYPRIVSSVQEEENKTAPGPDGTTITLPLDTSTPNPNGEEFDCLYLDM 60
Query: 37 NGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQ 96
NGI+H C+HP E + F Y E + M++P++L MAIDGVAPRAKMNQ
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEV--FAYTERVVSMVRPRRLLMMAIDGVAPRAKMNQ 118
Query: 97 QRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMN 156
QR RRFR+AKE A+EK E +A +
Sbjct: 119 QRSRRFRAAKE-------AREKHEET-----------------------------QAALA 142
Query: 157 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKI 216
+ R AK V E KE ++K +DSN ITPGTPFM L LRY+V KI
Sbjct: 143 EWR------AKGLAVTEDAPKE------SKKAWDSNAITPGTPFMDLLAASLRYWVAHKI 190
Query: 217 TTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLD 276
TD WKD+ VI+S PGEGEHKIM++IR +S P+++PN +H +YGLD
Sbjct: 191 NTDP---------GWKDIQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIYGLD 241
Query: 277 ADLIMLGLCTHEPYFSLLREEV-------------------------KFNTKSNKGGSQI 311
ADLIML L THEPYF +LRE+V KS + +
Sbjct: 242 ADLIMLSLATHEPYFKVLREDVFASDNKPKTCNLCGQPGHFAASCTGAARKKSGEHDEKA 301
Query: 312 VTPEETK-FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
TP E K F L ++ +R+YLE+E L P L F F +E IDDWV + F +GNDF+P
Sbjct: 302 QTPPEKKPFIFLDVATLREYLEVE---LNMPN-LPFAFDLERAIDDWVFLIFFVGNDFLP 357
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+LP L I +GA+ L K++++ LP + GY+ G + L R + L LAS + E FR +
Sbjct: 358 HLPSLEIRDGAIDTLLKIWKKELPAMGGYLTNHGKVELARAQLILNGLASQEDEIFRRRK 417
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMD 457
+ E KK + K + KE+D
Sbjct: 418 EEEDRRENN--KKRREDMQKRREKELD 442
Score = 160 bits (405), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 100/164 (60%)
Query: 507 HKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI 566
++ YY K + R + YI + W L YYY G SW WYYP H++P+ +D
Sbjct: 663 YRERYYREKFGVDLSDTDFRRQVVKSYIEGLSWVLAYYYQGVPSWQWYYPFHFSPFAADF 722
Query: 567 KDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+D L++K+E+G PF PF+QL+ VLPA S+ +P + LMT +S I+++YP EF D
Sbjct: 723 EDLESLDIKFELGAPFKPFEQLMGVLPADSRASIPPAFHPLMTESDSDIIDFYPSEFEID 782
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
+NGKK W+ V L+PFIDE +L+ A+ LLTD+E RN G
Sbjct: 783 MNGKKMAWQGVALLPFIDEKRLLDALSDKYPLLTDDEVRRNGFG 826
>gi|71747618|ref|XP_822864.1| 5'-3' exoribonuclease XRND [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832532|gb|EAN78036.1| 5'-3' exoribonuclease XRND, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 801
Score = 293 bits (750), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 205/693 (29%), Positives = 325/693 (46%), Gaps = 125/693 (18%)
Query: 1 MGVPKFFRYISERYP--------CLSEVV-------REY-QIPEFDNLYLDMNGIIHNCS 44
MG+ F+ ++ Y C+ E +EY Q +FDNLYLD+NG++H C
Sbjct: 1 MGIAGFYLWLKRWYASCMEDVPQCVVEAASKSSPPPKEYMQSHKFDNLYLDLNGLVHPCC 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
H + + +E+++F+ +F I+++F++++P+K + +DGVAP++KMNQQR RRFR+
Sbjct: 61 H-DTSPLPEPESEEEMFERVFTQIDLVFKVVRPRKCLILCVDGVAPQSKMNQQRSRRFRA 119
Query: 105 AKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFR 164
A+E + +GE +
Sbjct: 120 AEE--------RAEGEVM------------------------------------------ 129
Query: 165 SAKEAEVLEQKAKEKGERLP-TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWK 223
SAK A+VL EKG P +R+D N ITP TPFM RL + +FV K+ D L
Sbjct: 130 SAKCADVL----LEKGLPYPKVRERWDHNVITPSTPFMERLGLAIEWFVVKKVNEDPL-- 183
Query: 224 DTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLG 283
WK V V+ S PGEGEHKIM YIR ++ +P Y+P+ H +YG+DADLI LG
Sbjct: 184 -------WKKVAVVFSDAHVPGEGEHKIMQYIRGLRMQPGYDPDTSHVIYGMDADLISLG 236
Query: 284 LCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGV 343
L THE ++LR ++ + G KF L R+ L+ +F +KE
Sbjct: 237 LSTHEKSVTILRNQLNETFNAAHG----------KFCYFSLVKFRECLKRDFDGIKE--- 283
Query: 344 LSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEG 403
S E ++DD++ + F +GNDF+P++P + I + LL Y + Y+ +G
Sbjct: 284 ----MSFERVVDDFIFLCFFVGNDFLPHVPLISIKTRGVELLLDHYVNEFAS-HSYLTDG 338
Query: 404 GYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFH---KEKSKEMDPDL 460
G + K FL + F Y + E G++ + E+ + +L
Sbjct: 339 GEVRFKALSSFLAR--------FLNDYGSVLRDESSFGERAKERGRGNVAERVNKYQVEL 390
Query: 461 AALIKATDDD------YDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHY 514
++ + D D +++ A E + + + E ++ YY
Sbjct: 391 KKVLASVKRDKTNAQEVSDTAHKLMVSALKERVSFVGDKGSLGFTYHDE--DYRDKYYQK 448
Query: 515 KLDY-----AKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF 569
K + +K V R AE Y+R QW + YY +GC SW+W+YP+HYAP + D+ F
Sbjct: 449 KFGWDPEKRSKFEKRVKRCCAE-YLRGTQWVMRYYTSGCPSWNWFYPYHYAPLLDDLARF 507
Query: 570 S-HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLN 628
+ +++++E G P P QLLAVLP S LP + NS +YP+ D +
Sbjct: 508 TDSVDVEFERGTPRHPVVQLLAVLPRMSVGGLPVELHGAVLDPNSVFGPFYPDHVDVDYS 567
Query: 629 GKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTD 661
++ V+ +PFID ++ A + + L D
Sbjct: 568 EAIFAYQGVLRLPFIDCKEIEAACNTLVELQPD 600
>gi|340520299|gb|EGR50535.1| exoribonuclease [Trichoderma reesei QM6a]
Length = 1029
Score = 292 bits (748), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 174/477 (36%), Positives = 245/477 (51%), Gaps = 109/477 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIP-------------------EFDNLYLDMNGII 40
MG+P FR++S +YP +S V+ E I E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEETPITTDDGVTIPVDTTRPNPNGEELDNLYLDMNGIV 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H CSHP D E+++ ++F Y + + M++P+K+ +A+DGVAPRAKMNQQR R
Sbjct: 61 HPCSHPEDRPAP--ADEEEMMLEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFRSA+E AKEK E + I L + +Q G
Sbjct: 119 RFRSARE-------AKEK-----EEDKQALIEL---------------------LKRQNG 145
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
F +A V+ +K FDSN ITPGTPFM L LRY+ + K+ TD
Sbjct: 146 GVFEAADSEAVV-------------KKAFDSNSITPGTPFMDILAVSLRYWCQYKLNTDP 192
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W + +I+S PGEGEHKIM +IR ++ P+Y+PN RH +YGLDADLI
Sbjct: 193 ---------AWAKLKIIISDATVPGEGEHKIMSFIRSQRASPNYDPNTRHVIYGLDADLI 243
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNKG----------------------------GSQIV 312
MLGL THEP+F +LRE+V FN N+ ++ V
Sbjct: 244 MLGLATHEPHFRVLREDVFFNEGKNRACKLCGQKGHEANNCRGTAKPNDMAEGDEQAKAV 303
Query: 313 TPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
F LH+S++R+YL +E L P L F F +E IDDW+ M +GNDF+P+L
Sbjct: 304 QAPLKPFIWLHVSVLREYLAIE---LSVPD-LPFRFDLERAIDDWIFMCCFVGNDFLPHL 359
Query: 373 PDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
P L I + L +++ LP++ GY+ + G+++L+R + L LAS + F+ +
Sbjct: 360 PALEIREHGIDTLTTIWRNSLPSMGGYVTKDGHIDLERAQVILDGLASQESAIFKRR 416
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 101/160 (63%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y+ + W L YY+ GC SW WYYP+HYAP+ +D KD +
Sbjct: 603 YYQQKFGKDPQDIEFRHKVAHAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFKDLA 662
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ + +E G PF+QL++VLPAAS+ LPE + LMT ++S I+++YPEEF DLNGK
Sbjct: 663 KMEISFEKGRVSRPFEQLMSVLPAASRHALPEVFHELMTEKDSEIIDFYPEEFEIDLNGK 722
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V L+PFID +L+KA+ + LL+ ++ +RN G
Sbjct: 723 KMAWQGVALLPFIDMKRLLKAVQSKYPLLSPDDIARNTIG 762
>gi|346979187|gb|EGY22639.1| 5'-3' exoribonuclease [Verticillium dahliae VdLs.17]
Length = 1013
Score = 292 bits (748), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 182/474 (38%), Positives = 241/474 (50%), Gaps = 106/474 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ---------IP-----------EFDNLYLDMNGII 40
MG+P FR++S +YP + V E Q IP E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEDQPLQMEDGTTIPVDTTGPNPNGEELDNLYLDMNGIV 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H CSHP D P + E+++ ++F Y + + M++P+KL +A+DGVAPRAKMNQQR R
Sbjct: 61 HPCSHPEDR-PAPK-DEEEMMLEVFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFRSA+EA ++K +K E L KL G+ P
Sbjct: 119 RFRSAQEA---QEKEVDKQELL-----------------KLLKQQNGGILP--------- 149
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
E LE K K FDSN ITPGTPFM L LRY+ K+ TD
Sbjct: 150 --------PETLESMNK---------KAFDSNSITPGTPFMDTLATSLRYWCAYKLNTDP 192
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W + +I+S PGEGEHKIM+Y+R + PDY+PN RH +YGLDADLI
Sbjct: 193 ---------AWARLKIIISDATVPGEGEHKIMNYVRSQRGSPDYDPNTRHVIYGLDADLI 243
Query: 281 MLGLCTHEPYFSLLREEV--------KFNTKSNKGGSQIVTPEETK-------------- 318
MLGL THEP+F +LRE+V KG V E K
Sbjct: 244 MLGLATHEPHFRVLREDVFAQDAKAKMCKICGQKGHDARVCKGEAKDKDGEYDEQDKAVD 303
Query: 319 ---FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
F LH+S+ R+YL +E L P L F F +E IDDWV M +GNDF+P+LP L
Sbjct: 304 LKPFIWLHVSIFREYLAIE---LDVPD-LPFRFDLERAIDDWVFMCCFVGNDFLPHLPAL 359
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I + L +++E LP + GY+ + G+++LKR + + LA + FR +
Sbjct: 360 EIRENGIDALTTIWKENLPRMGGYVTKDGHIDLKRVQLIMDGLAKQEDAIFRRR 413
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 95/141 (67%)
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
A+ Y+ + W L YYY GC SW WYYP+HYAP+ +D D + + +E G PF+QL+
Sbjct: 603 AQAYVEGLCWVLLYYYQGCPSWDWYYPYHYAPFAADFADLDKIEISFEKGRISKPFEQLM 662
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
+V+PAAS+ LPE + +LM E+S ++++YP+EF DLNGKK W+ V L+PFID +L+
Sbjct: 663 SVMPAASRRALPEVFHDLMLNEDSEVIDFYPQEFEIDLNGKKFAWQGVALLPFIDMPRLL 722
Query: 650 KAMDAVEHLLTDEERSRNRHG 670
A++ LL+ E+ +RN G
Sbjct: 723 AAVEKKYPLLSPEDAARNGIG 743
>gi|67516851|ref|XP_658311.1| hypothetical protein AN0707.2 [Aspergillus nidulans FGSC A4]
gi|74598763|sp|Q5BFH3.3|XRN2_EMENI RecName: Full=5'-3' exoribonuclease 2
gi|40746327|gb|EAA65483.1| hypothetical protein AN0707.2 [Aspergillus nidulans FGSC A4]
gi|259489019|tpe|CBF88946.1| TPA: 5'-3' exoribonuclease 2 (EC 3.1.13.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BFH3] [Aspergillus
nidulans FGSC A4]
Length = 1032
Score = 292 bits (748), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/473 (36%), Positives = 248/473 (52%), Gaps = 106/473 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S++YP +S V+ E +IP E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSKKYPKIISSVIEELPQEVNGEEIPVDITGPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P E+++ +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPPP--ANEQEMMIEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA ++K +E F + L AK N +
Sbjct: 119 FRSAQEAREQDEKKQE-------------------FQRML-----------AKQNGDK-- 146
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
EQ +E+ +K +DSN ITPGTPFM L LRY++ K+ TD
Sbjct: 147 -----------EQMLQEE----VIQKTWDSNVITPGTPFMDILAASLRYWIAYKLNTDP- 190
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + +I+S PGEGEHKIM++IR ++ P+++PN RH +YGLDADLIM
Sbjct: 191 --------AWEKLKIIISDATVPGEGEHKIMEFIRSQRASPEHDPNARHVIYGLDADLIM 242
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTP----EETK------------------- 318
LGL THEP+F +LRE+V F + P EE +
Sbjct: 243 LGLATHEPHFRVLREDVFFQESKQRTCHLCGQPGHKAEECRGQAKEKNGEFDEKGKGATL 302
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F LH+S++R+YL E +P FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 303 KPFIWLHVSILREYLAAELYVPHQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLD 358
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I + L ++++ +P + GY+ + G ++LK+ + L LA + FR +
Sbjct: 359 IREDGIDTLIAIWRDNIPLMGGYLTQDGRVDLKKAQLILQGLAKQEDAIFRRR 411
Score = 163 bits (412), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 101/160 (63%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 591 YYEQKFGVDPQDKEFRHKVARAYAEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDIG 650
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ L +E G PF P++QL+ VLPA+S +P+ + +LMT +S I+++YPE+F DLNGK
Sbjct: 651 DMELSFEKGTPFKPYEQLMGVLPASSNHAIPKVFHSLMTEPDSEIIDFYPEDFPVDLNGK 710
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ VVL+PFIDE +L+ AM LLT++E++RN G
Sbjct: 711 KFAWQGVVLLPFIDEKRLLAAMSKKYPLLTEDEKARNTVG 750
>gi|225560323|gb|EEH08605.1| 5'->3' exoribonculease Dhp1 [Ajellomyces capsulatus G186AR]
Length = 1042
Score = 292 bits (748), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 174/477 (36%), Positives = 248/477 (51%), Gaps = 113/477 (23%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S VV E ++P E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP+ P TE+ + +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPDGKPP--PETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA+ ++K +E F K L R
Sbjct: 119 FRSAQEAKEADEKKEE-------------------FAKLL-------------------R 140
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ +K E L ++ K +DSN ITPGTPFM L LRY+V K+ TD
Sbjct: 141 KQNGSKGGEGLVEEV--------ITKTWDSNVITPGTPFMDILAAALRYWVAYKLNTDP- 191
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + +I+S PGEGEHKIM++IR +S +++PN RH +YGLDADLIM
Sbjct: 192 --------AWEKLKIIISDATVPGEGEHKIMEFIRSQRSCAEHDPNTRHVIYGLDADLIM 243
Query: 282 LGLCTHEPYFSLLREEVKFNTKSN-----------------------------KGGSQIV 312
LGL THEP+F +LRE+V F KG +
Sbjct: 244 LGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKGKGSPL 303
Query: 313 TPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
P F LH+S++R+YL +E ++P FPF +E +DDWV M F +GNDF+P+L
Sbjct: 304 KP----FIWLHVSVLREYLAVEMHVPQQP----FPFDLERALDDWVFMCFFVGNDFLPHL 355
Query: 373 PDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
P L I + L ++++ +P ++GY+ + G+++L R + L LA + FR +
Sbjct: 356 PSLDIRENGIDTLIAIWRDNIPAMNGYLTKDGHVDLDRAQLILQGLAKQEDAIFRRR 412
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 582 YYEQKFHVDPKDIEFRHKVARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLG 641
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
++ +++ G PF PF+QL+ VLPAAS +PE + +LM+ S I+++YPE+F DLNGK
Sbjct: 642 NMKIEFNKGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPESEIIDFYPEDFPIDLNGK 701
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDY 690
K W+ V L+PFIDE +L+ AM+ LL++EE +RN G +++ L L ++
Sbjct: 702 KFAWQGVALLPFIDEKRLLLAMEKRYPLLSNEEHARNTTGREVLFLSDRHPLYENLTANF 761
Query: 691 F------PAINENHAVEKPL----YRDDIYV 711
+ P + N V + L R+D YV
Sbjct: 762 YSKKQLAPTLKLNMRVSEGLGGKVGRNDAYV 792
>gi|240278750|gb|EER42256.1| 5'->3' exoribonculease Dhp1 [Ajellomyces capsulatus H143]
gi|325090340|gb|EGC43650.1| 5'-3' exoribonculease Dhp1 [Ajellomyces capsulatus H88]
Length = 1042
Score = 292 bits (748), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 174/477 (36%), Positives = 248/477 (51%), Gaps = 113/477 (23%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S VV E ++P E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP+ P TE+ + +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPDGKPP--PETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA+ ++K +E F K L R
Sbjct: 119 FRSAQEAKEADEKKEE-------------------FAKLL-------------------R 140
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ +K E L ++ K +DSN ITPGTPFM L LRY+V K+ TD
Sbjct: 141 KQNGSKGGEGLVEEV--------ITKTWDSNVITPGTPFMDILAAALRYWVAYKLNTDP- 191
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + +I+S PGEGEHKIM++IR +S +++PN RH +YGLDADLIM
Sbjct: 192 --------AWEKLKIIISDATVPGEGEHKIMEFIRSQRSCAEHDPNTRHVIYGLDADLIM 243
Query: 282 LGLCTHEPYFSLLREEVKFNTKSN-----------------------------KGGSQIV 312
LGL THEP+F +LRE+V F KG +
Sbjct: 244 LGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKGKGSPL 303
Query: 313 TPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
P F LH+S++R+YL +E ++P FPF +E +DDWV M F +GNDF+P+L
Sbjct: 304 KP----FIWLHVSVLREYLAVEMHVPQQP----FPFDLERALDDWVFMCFFVGNDFLPHL 355
Query: 373 PDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
P L I + L ++++ +P ++GY+ + G+++L R + L LA + FR +
Sbjct: 356 PSLDIRENGIDTLIAIWRDNIPAMNGYLTKDGHVDLDRAQLILQGLAKQEDAIFRRR 412
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 582 YYEQKFHVDPKDIEFRHKVARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLG 641
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
++ +++ G PF PF+QL+ VLPAAS +PE + +LM+ S I+++YPE+F DLNGK
Sbjct: 642 NMKIEFNKGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPESEIIDFYPEDFPIDLNGK 701
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDY 690
K W+ V L+PFIDE +L+ AM+ LL++EE +RN G +++ L L ++
Sbjct: 702 KFAWQGVALLPFIDEKRLLLAMEKRYPLLSNEEHARNTTGREILFLSDRHPLYENLTANF 761
Query: 691 F------PAINENHAVEKPL----YRDDIYV 711
+ P + N V + L R+D YV
Sbjct: 762 YSKKQLAPTLKLNMRVSEGLGGKVGRNDAYV 792
>gi|358055903|dbj|GAA98248.1| hypothetical protein E5Q_04931 [Mixia osmundae IAM 14324]
Length = 1271
Score = 291 bits (745), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 180/501 (35%), Positives = 241/501 (48%), Gaps = 139/501 (27%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE----------------------------------YQI 26
MGVP FR++S++YP + V+E +I
Sbjct: 1 MGVPALFRWLSKKYPHIVTSVKEDLPTKAQPGASRLDPVTGQPLPGSEDDPDGGGEDVEI 60
Query: 27 P-----------EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMI 75
P EFD LYLDMNGI+H C+HP P TE + +IF Y E + MI
Sbjct: 61 PVDMSLPNPNGEEFDCLYLDMNGIVHPCTHPEGKPPP--ETEADMMVEIFAYTERVVNMI 118
Query: 76 QPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKF 135
+P+KL +AIDGVAPRAKMNQQR RRFR+++EA+ KA+E
Sbjct: 119 RPRKLLLIAIDGVAPRAKMNQQRSRRFRASQEAKT---KAEE------------------ 157
Query: 136 CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA--KEKGERLPTEKRFDSNC 193
KEA + E +A KE + +K +D N
Sbjct: 158 -------------------------------KEAAIREWEAMGKEVSDEYKDKKAWDQNA 186
Query: 194 ITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMD 253
ITPGTPFM L LRY+V K+ +D W + V++S PGEGEHKIMD
Sbjct: 187 ITPGTPFMDLLAASLRYWVASKLNSDP---------GWSKLQVVISDASVPGEGEHKIMD 237
Query: 254 YIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVT 313
YIR +S Y+PN RH +YGLDADLIML L THEPYF +LRE+V + +G +
Sbjct: 238 YIRRQRSHAGYDPNTRHVIYGLDADLIMLSLATHEPYFKVLREDVFAQDRKPRGCHRCGQ 297
Query: 314 P-------------------------EETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPF 348
P E F L +S++R+YLE+E L PGV FPF
Sbjct: 298 PGHHSSNCTGAPKEKQGEFDEKNKITERKPFIFLDVSVLREYLEIE---LNVPGV-PFPF 353
Query: 349 SIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNL 408
+E IDDWV + F +GNDF+P+LP L I GA+ L +++ LP + Y+ G +N+
Sbjct: 354 DLERAIDDWVFLIFFVGNDFLPHLPSLEIREGAIDTLLAIWRTSLPQMGDYLTSHGKVNM 413
Query: 409 KRFEKFLTKLASFDFEQFREK 429
K + L LA + E F+ +
Sbjct: 414 KSAQFILDGLARREDEIFQRR 434
Score = 181 bits (460), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 117/181 (64%), Gaps = 2/181 (1%)
Query: 507 HKTDYYHYKLDYAKVTNEVLRDQ-AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISD 565
+K YY K + ++ RDQ + Y+ + W L YYY GC SW W+YP H+AP+ SD
Sbjct: 728 YKERYYQQKFG-VPLEDKAFRDQIVKNYMEGLSWVLAYYYQGCPSWQWFYPWHFAPFASD 786
Query: 566 IKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFAT 625
D L++++E+G PF PF+QL+ V PAAS++ +P P+ +LMT E+SPI+++YPEEF
Sbjct: 787 FTDLEKLDIQFELGAPFRPFEQLMGVFPAASRKHIPAPFHDLMTSEDSPIIDFYPEEFMI 846
Query: 626 DLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTA 685
D+NGKK W+ V L+PFID +L+ A+D H L+++E RN G +V+ N L A
Sbjct: 847 DMNGKKMLWQGVALLPFIDSSRLLAALDLHYHELSEDEERRNGLGSDVVFVNDNHGLYEA 906
Query: 686 L 686
L
Sbjct: 907 L 907
>gi|384490873|gb|EIE82069.1| hypothetical protein RO3G_06774 [Rhizopus delemar RA 99-880]
Length = 967
Score = 291 bits (745), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 175/473 (36%), Positives = 251/473 (53%), Gaps = 108/473 (22%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP-----------EFDNLYLDMNGIIH 41
MGVP FFR++S+++P + + V IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSDKFPKVVTPAIEERPKTVNGMTIPVDTTKPNPNNEEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP TE ++ +IF Y++ + +++P+K+ +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCCHPEGKPAP--ATEDEMMIEIFTYLDRIVDIVRPRKVLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FR+A+ L Q ++ ER+ E
Sbjct: 119 FRAAQ----LAQIERDASERVAYEL----------------------------------- 139
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
A + ++ EK E FDSNCITPGTPFM L LRY + K TD L
Sbjct: 140 -------AAIGQEHQMEK-----KESHFDSNCITPGTPFMAHLATCLRYHIASKQNTDPL 187
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
WK + VILS PGEGEHK+M++IR +S+ +++PN H +YGLDADLIM
Sbjct: 188 ---------WKKLKVILSDATVPGEGEHKVMEFIRVERSRSEHDPNTSHVMYGLDADLIM 238
Query: 282 LGLCTHEPYFSLLREEV------KFN-TKSNKGG--------SQIVTPEETK-------- 318
L L THEP+F ++RE+V K N T N+ G S+ E +K
Sbjct: 239 LALGTHEPHFKIIREDVFADNKRKSNCTNCNRRGHTADKCPLSEDSAAEPSKDDNSNLKP 298
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
+ LH++++R+YLE K PG+ P+++E IDDWV M F +GNDF+P+LP L I
Sbjct: 299 YVFLHVNILREYLEYAL-KFNIPGI---PWNLERAIDDWVFMCFFVGNDFLPHLPSLEIR 354
Query: 379 NGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYA 431
GA+ L ++++ +P + GY+ + G ++LKR + +++L + FR++ A
Sbjct: 355 EGAISTLSLLWKKCMPMMGGYMTKDGDVDLKRVQVLVSELGHMEDTIFRDRKA 407
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 104/169 (61%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K + +R+ + Y + W YYY GCVSWSWYYP++YAP SD
Sbjct: 567 KERYYGTKFRLNLEEKDEIREIVKSYCEGLIWVFKYYYLGCVSWSWYYPYYYAPMASDFI 626
Query: 568 DFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDL 627
+ ++K+E P PF+QL+ VLPAAS+ +P P+ LMT ENSPI++YYP F D+
Sbjct: 627 NIDSFDIKFEKSAPLRPFEQLMGVLPAASRSHIPAPFHPLMTDENSPIIDYYPTHFEVDM 686
Query: 628 NGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
+GKK +W+ VV +PFI+ +L+ AMD V L +EE RN GP ++Y
Sbjct: 687 DGKKWEWQGVVKLPFINSERLLAAMDTVYDQLNEEEVQRNSVGPAVLYV 735
>gi|239607237|gb|EEQ84224.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis ER-3]
gi|327351196|gb|EGE80053.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis ATCC 18188]
Length = 1031
Score = 291 bits (744), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 173/473 (36%), Positives = 246/473 (52%), Gaps = 105/473 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S VV E ++P E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P TE+ + +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPPP--ETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA+ ++K +E F L + +Q G
Sbjct: 119 FRSAQEAKEADEKKEE------------FAKL---------------------LRKQNGN 145
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ EV+ K +DSN ITPGTPFM L LRY+V K+ TD
Sbjct: 146 KGGEGLVEEVI-------------TKTWDSNVITPGTPFMDILAAALRYWVAYKLNTDP- 191
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + +I+S PGEGEHKIM++IR +S +++PN RH +YGLDADLIM
Sbjct: 192 --------AWEKLKIIISDATVPGEGEHKIMEFIRSQRSCTEHDPNTRHVIYGLDADLIM 243
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTP-------------------EETK---- 318
LGL THEP+F +LRE+V F + P E+ K
Sbjct: 244 LGLATHEPHFRVLREDVFFQESKGRTCHLCGQPGHIAEACKGLAKEKNGEFDEKGKGSPL 303
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F LH+S++R+YL +E ++P FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 304 KPFIWLHVSVLREYLAVEMHVPQQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLD 359
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I + L ++++ +P + GY+ + G+++L R + L LA + FR +
Sbjct: 360 IRENGIDTLIAIWRDNIPVMGGYLTKDGHVDLDRAQLILQGLAKQEDAIFRRR 412
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 119/211 (56%), Gaps = 10/211 (4%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 574 YYEQKFRVDPKDTEFRHKVARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLG 633
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+N+++ G PF PF+QL+ VLPAAS +PE + +LM+ S I+++YPEEF DLNGK
Sbjct: 634 KMNIEFSRGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPESEIIDFYPEEFPIDLNGK 693
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDY 690
K W+ V L+PFIDE +L+ AM+ LL+ EE +RN G +++ L L ++
Sbjct: 694 KFAWQGVALLPFIDEKRLLLAMEKRYPLLSSEEHARNTMGREVLFLSDRHPLYDNLTANF 753
Query: 691 F------PAINENHAVEKPLY----RDDIYV 711
+ P + N V + L R+D YV
Sbjct: 754 YSKKQGTPILKLNMRVSEGLGGKVERNDAYV 784
>gi|154276492|ref|XP_001539091.1| hypothetical protein HCAG_06696 [Ajellomyces capsulatus NAm1]
gi|150414164|gb|EDN09529.1| hypothetical protein HCAG_06696 [Ajellomyces capsulatus NAm1]
Length = 475
Score = 291 bits (744), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 174/473 (36%), Positives = 249/473 (52%), Gaps = 105/473 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S VV E ++P E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP+ P TE+ + +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPDGKPPPE--TEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA+ ++K +E F K L R
Sbjct: 119 FRSAQEAKEADEKKEE-------------------FAKLL-------------------R 140
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ +K E L ++ K +DSN ITPGTPFM L LRY+V K+ TD
Sbjct: 141 KQNGSKGGEGLVEEV--------ITKTWDSNVITPGTPFMDVLAAALRYWVAYKLNTDP- 191
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+++ +I+S PGEGEHKIM++IR +S +++PN RH +YGLDADLIM
Sbjct: 192 --------AWENLKIIISDATVPGEGEHKIMEFIRSQRSCAEHDPNTRHVIYGLDADLIM 243
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKG----GSQIVTPEETK------------------- 318
LGL THEP+F +LRE+V F + G E K
Sbjct: 244 LGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKGKGSPL 303
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F LH+S++R+YL +E ++P FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 304 KPFIWLHVSVLREYLAVEMHVPQQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLD 359
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I + L ++++ +P ++GY+ + G+++L R + L LA + FR +
Sbjct: 360 IRENGIDTLIAIWRDNIPAMNGYLTKDGHVDLGRAQLILQGLAKQEDAIFRRR 412
>gi|261200841|ref|XP_002626821.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis SLH14081]
gi|239593893|gb|EEQ76474.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis SLH14081]
Length = 1031
Score = 291 bits (744), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 173/473 (36%), Positives = 246/473 (52%), Gaps = 105/473 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S VV E ++P E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P TE+ + +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPPP--ETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA+ ++K +E F L + +Q G
Sbjct: 119 FRSAQEAKEADEKKEE------------FAKL---------------------LRKQNGN 145
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ EV+ K +DSN ITPGTPFM L LRY+V K+ TD
Sbjct: 146 KGGEGLVEEVI-------------TKTWDSNVITPGTPFMDILAAALRYWVAYKLNTDP- 191
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + +I+S PGEGEHKIM++IR +S +++PN RH +YGLDADLIM
Sbjct: 192 --------AWEKLKIIISDATVPGEGEHKIMEFIRSQRSCTEHDPNTRHVIYGLDADLIM 243
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTP-------------------EETK---- 318
LGL THEP+F +LRE+V F + P E+ K
Sbjct: 244 LGLATHEPHFRVLREDVFFQESKGRTCHLCGQPGHIAEACKGLAKEKNGEFDEKGKGSPL 303
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F LH+S++R+YL +E ++P FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 304 KPFIWLHVSVLREYLAVEMHVPQQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLD 359
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I + L ++++ +P + GY+ + G+++L R + L LA + FR +
Sbjct: 360 IRENGIDTLIAIWRDNIPVMGGYLTKDGHVDLDRAQLILQGLAKQEDAIFRRR 412
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 119/211 (56%), Gaps = 10/211 (4%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 574 YYEQKFRVDPKDTEFRHKVARSYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLG 633
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+N+++ G PF PF+QL+ VLPAAS +PE + +LM+ S I+++YPEEF DLNGK
Sbjct: 634 KMNIEFSRGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPESEIIDFYPEEFPIDLNGK 693
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDY 690
K W+ V L+PFIDE +L+ AM+ LL+ EE +RN G +++ L L ++
Sbjct: 694 KFAWQGVALLPFIDEKRLLLAMEKRYPLLSSEEHARNTMGREVLFLSDRHPLYDNLTANF 753
Query: 691 F------PAINENHAVEKPLY----RDDIYV 711
+ P + N V + L R+D YV
Sbjct: 754 YSKKQGTPILKLNMRVSEGLGGKVERNDAYV 784
>gi|403224058|dbj|BAM42188.1| exoribonuclease [Theileria orientalis strain Shintoku]
Length = 1230
Score = 290 bits (743), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 215/650 (33%), Positives = 312/650 (48%), Gaps = 166/650 (25%)
Query: 1 MGVPKFFRYISERYPCL-SEVVREY-----------QI----------PEFDNLYLDMNG 38
MGVP F+R++ RYP + ++V Y Q+ EFDNLYLDMNG
Sbjct: 1 MGVPTFYRWLCNRYPRVPKDLVDNYNDRNLDLSDEDQVGLDLLSPNPNGEFDNLYLDMNG 60
Query: 39 IIHNCSHP-NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQ 97
IIH C HP N P +E+ +F+ I YI+ +F +++P+KL ++AIDGVAPRAK+NQQ
Sbjct: 61 IIHPCCHPENMEQPE---SEEIMFKCIVEYIDRIFYLVRPRKLIYLAIDGVAPRAKINQQ 117
Query: 98 RGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQ 157
R RRF+SA A+ LE + EK + EK+ D
Sbjct: 118 RSRRFKSAALAD-LEDETYEKMLKEYLEKKNDM--------------------------- 149
Query: 158 QRGRRFRSAKEAEVLEQKAKEKGERLPTEK-RFDSNCITPGTPFMCRLHQQLRYFVKLKI 216
+P K ++DSN ITPGT FM +L ++ ++K ++
Sbjct: 150 ------------------------EIPVRKNKWDSNVITPGTEFMYKLSNKIVEYIKERV 185
Query: 217 TTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLD 276
W+ + VI S PGEGEHKIM++IR + PDY+PN +H L+G+D
Sbjct: 186 E---------KYDAWRRIVVIFSDSNVPGEGEHKIMEFIRSQRHCPDYDPNTKHVLHGMD 236
Query: 277 ADLIMLGLCTHEPYFSLLREEVKFNTK-SNK-----------GGSQIVTP------EETK 318
ADLIMLGL THEP F +LRE V F SNK G + P +E K
Sbjct: 237 ADLIMLGLTTHEPNFYILREIVTFYVHPSNKIAPKEFELEEPEGRSALAPKADNMSKEEK 296
Query: 319 FF-----------LLHLSLMRDYL--ELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIG 365
+ LL L+++R+YL +L F + G E +DD VLM F G
Sbjct: 297 YMKMMRENWKPLQLLQLAVLREYLSHQLRFVTGFDNGS---SIDFERCVDDLVLMIFFCG 353
Query: 366 NDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQ 425
NDF+PNLP + I G++ + +YQ++LP+L+ Y++ G LN F L+ + E
Sbjct: 354 NDFLPNLPSISITGGSIDQMILLYQKLLPSLNDYLSNEGNLNFHSISTFFHYLSKIENET 413
Query: 426 FREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAA------LIKATDDDYDDGTEEVL 479
F++ Y +Y KK S+ +HK +S +++P + K T D G E V
Sbjct: 414 FKQIY---EY------KKKSEEYHKNRS-QVNPRGTTHRPENEVTKVT----DGGKEGVF 459
Query: 480 NYANYEEYYYSDEDEEWRTNFFSEFGQHKT--------------------DYYHYKLDYA 519
N D +E++ + E + K+ YY K
Sbjct: 460 GGENGS--VNKDAEEDFMKRYEEELNKLKSVDEVKLSVDVTLNDPRLWKEAYYREKFHLT 517
Query: 520 KVTN--EVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
+ + E +++ + YI+ I W L YYY GC SWSWYYP+HY+P+ SD++
Sbjct: 518 EEDDMKEFVQEVSFHYIKGICWVLRYYYQGCPSWSWYYPYHYSPFCSDLE 567
Score = 90.9 bits (224), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%)
Query: 574 LKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQD 633
+K++ G P PFQQL+ V+P S +PE + LMT SP+ ++YP +F D NGK+
Sbjct: 728 IKFDYGTPLTPFQQLMGVMPIRSSHCIPESLRGLMTDPESPLRDFYPVKFQEDPNGKRYK 787
Query: 634 WEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
++ V L+PFIDE KL+ + +E L +EE+ RNR
Sbjct: 788 YQWVALLPFIDEEKLLHYVKPIEEKLNEEEKYRNR 822
>gi|156387822|ref|XP_001634401.1| predicted protein [Nematostella vectensis]
gi|156221484|gb|EDO42338.1| predicted protein [Nematostella vectensis]
Length = 1350
Score = 290 bits (743), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 181/602 (30%), Positives = 306/602 (50%), Gaps = 55/602 (9%)
Query: 677 YSNVNLGTALAPD------YFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYV 730
+ +++ A+ PD FP I+ H + R+ + L KGL +DV L++Y
Sbjct: 124 FPDISRCHAMFPDISRWHAMFPDISRCHDRCEKFDREQLVSSLENLVKGLLKDVKLEVYF 183
Query: 731 THFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINY 790
FPTL H+ T +++ A VKVFQ SR++S+I+ + Q+ +VA++ LG+T ++ +
Sbjct: 184 PGFPTLYHIPHTAELKKASVKVFQMHSRSDSMILKLQQSQLEPTIRVAEKYLGETCYVGW 243
Query: 791 PHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGN 850
PH++E V AV+ R S K + + + +D ++ KS + G+D+G
Sbjct: 244 PHMVEALVVAVSDNTFRYSRKKGEKDIQQDILSE-EDGWEKQVKSFAQSQMERRGIDVGA 302
Query: 851 TEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAV--LNLQQARESLEYKTID 908
E+L+ PV R++ +G+VT ++ + YA+Q+ V +++ ++ + +TID
Sbjct: 303 VEILIDACPVIGRRFLCSAKGQVTLEKEWSPVPKQYAFQTVVKDISVHESVSTDSMRTID 362
Query: 909 EIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNY 968
E+F C CF L+ PHYG+ G V+ V + +++ +V +EP+++ + ++D Y
Sbjct: 363 ELFPVDCVCFMLAMPHYGASGTVLE-VDVKQGRVRVQLRVPEEPNIASIAKQREDLSVGY 421
Query: 969 LPSYTVASKLSISPLLLSRFTGSIFIIDSTEE-----GAKRHNIGLNIKFSRKNEEVVGF 1023
LPS+ VA K+ IS LL + T FI + E G K+ +IGLN+K +++N+E++G+
Sbjct: 422 LPSHVVAQKMGISSSLLGKITAKFFIEQGSREKSKGQGNKKIDIGLNLKLTKQNKELLGY 481
Query: 1024 TRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRV-AQ 1082
TRR T W +T+ +I Y+ +FP++F L D D+ H + V
Sbjct: 482 TRR--TQNGWMFTQAARNVITQYINKFPKLFDALATLQQSDQVYEADMLDHGIDLSVLTD 539
Query: 1083 IVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTC-----EKVE------------- 1124
+ +WLK P K V CG+ +D V+ IE AV E +E
Sbjct: 540 VQNWLKSLPLQKQTVVTCGSDALDDPVLEAIEEAVKKVKVSYLEAIEGAVRKVKHFFTPK 599
Query: 1125 ------------------KQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDC 1166
K + + V+P L+ P L PD DT+ +LFDRVVN++
Sbjct: 600 NGQLMGVRMAIIKTSLPPKIVKVRVRPYLLFRPSDFLGNTLPDSDTEIQLFDRVVNVKLN 659
Query: 1167 YTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYG 1226
VP G RGT++G GE D + +V+FD+ F IR + + Y ++I+L++G
Sbjct: 660 SAVPFGLRGTVVGFHIGEDD-DELVEVLFDEHFIGAQSIRRTTNGVYLAHPSSLIDLTFG 718
Query: 1227 ER 1228
ER
Sbjct: 719 ER 720
>gi|258563400|ref|XP_002582445.1| 5'-3' exoribonuclease 2 [Uncinocarpus reesii 1704]
gi|237907952|gb|EEP82353.1| 5'-3' exoribonuclease 2 [Uncinocarpus reesii 1704]
Length = 1028
Score = 290 bits (742), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 174/463 (37%), Positives = 241/463 (52%), Gaps = 105/463 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S VV E +IP E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSTKYPKIISAVVEELPQEFNGEEIPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P E ++ +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPPP--SNEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA+ ++K E F K L K N+ +G
Sbjct: 119 FRSAQEAKEADEKKAE-------------------FAKLL-----------RKQNRGKG- 147
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ E+ E+ K +DSN ITPGTPFM L LRY+V K+ TD
Sbjct: 148 ------DTELAEEV---------VNKTWDSNVITPGTPFMDILSAALRYWVAYKLNTDP- 191
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + +I+S PGEGEHKIM++IR +S +++PN RH +YGLDADLIM
Sbjct: 192 --------AWEKLKIIISDATVPGEGEHKIMEFIRSQRSCSEHDPNTRHVIYGLDADLIM 243
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKG----GSQIVTPEETK------------------- 318
LGL THEP+F +LRE+V F + G Q E
Sbjct: 244 LGLGTHEPHFRVLREDVFFQESKARTCRLCGQQGHVAEACTGKAKEKSGEFDEKQKGSPL 303
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F LH+S++R+YL E +P FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 304 KPFIWLHVSVLREYLAAEMFVPNQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLE 359
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
I + L ++++ +P + GY+ + G+++LKR + L LA
Sbjct: 360 IRENGIDTLIAIWRDNIPLMGGYLTKDGHVDLKRAQLILQGLA 402
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 104/160 (65%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K + E A+ Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 588 YYEQKFNVDPKDIEFRHKVAKSYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLD 647
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+++++ G+PF PF+QL+ VLPAAS +P+ +++LM+ S I+++YPE+F DLNGK
Sbjct: 648 QMDIQFNKGKPFRPFEQLMGVLPAASNHAIPDIFRDLMSDPASEIIDFYPEDFPIDLNGK 707
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V L+PFIDE +L+ AM H LT+ ER+RN G
Sbjct: 708 KFAWQGVALLPFIDEKRLLAAMAKRYHRLTEAERARNEMG 747
>gi|431894120|gb|ELK03920.1| 5'-3' exoribonuclease 2 [Pteropus alecto]
Length = 1091
Score = 290 bits (742), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 177/443 (39%), Positives = 239/443 (53%), Gaps = 88/443 (19%)
Query: 28 EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDG 87
EFDNLYLDMNGIIH C+HP D P + E ++ IF YI+ LF +++P++L +MAIDG
Sbjct: 159 EFDNLYLDMNGIIHPCTHPEDK-PAPK-NEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDG 216
Query: 88 VAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG---ERLPTEKRFDFITLKFCFPKKLFFM 144
V + E LE + KG + E DF
Sbjct: 217 V------------------DKEYLEIDGQWKGMDGTDMGKEDLPDFSD------------ 246
Query: 145 AIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE----KGERLPTEK---RFDSNCI 194
APRAKMNQQR RRFR++KE A V +Q+ +E KG LP E+ RFDSNCI
Sbjct: 247 -----APRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCI 301
Query: 195 TPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDY 254
TPGT FM L + LRY++ ++ D WK++ VILS PGEGEHKIMDY
Sbjct: 302 TPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLTVILSDASAPGEGEHKIMDY 352
Query: 255 IRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTK-----SNKGGS 309
IR +++P+++PN HCL G DADLIMLGL THEP F+++REE K N N+ G
Sbjct: 353 IRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFGH 412
Query: 310 QIVTPE--------------------ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFS 349
++ E E +F L L+++R+YLE E L F F
Sbjct: 413 EVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTM----ASLPFTFD 468
Query: 350 IENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLK 409
+E IDDWV M F +GNDF+P+LP L I GA+ L +Y+ V+ GY+ E GY+NL+
Sbjct: 469 VERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQ 528
Query: 410 RFEKFLTKLASFDFEQFREKYAD 432
R + + + + F+++ D
Sbjct: 529 RVQMIMLAVGEVEDSIFKKRKDD 551
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 658 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 717
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 718 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 777
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 778 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 827
>gi|212531981|ref|XP_002146147.1| 5'->3' exoribonculease Dhp1 [Talaromyces marneffei ATCC 18224]
gi|210071511|gb|EEA25600.1| 5'->3' exoribonculease Dhp1 [Talaromyces marneffei ATCC 18224]
Length = 1042
Score = 290 bits (741), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 171/473 (36%), Positives = 243/473 (51%), Gaps = 102/473 (21%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ--------IP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP + V E Q IP E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEQPYEVNGEVIPVDTTKPNPNGEETDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P E+++ +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPPP--ANEQEMMLEIFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA +QK KE+ ++L ++ A G+ P + +Q
Sbjct: 119 FRSAQEARENDQK-KEEFQKLLVKQN-----------------AAKGIDPDKDIKEQV-- 158
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+K +DSN ITPGTPFM L LRY++ K+ TD
Sbjct: 159 -----------------------IQKTWDSNVITPGTPFMDILSASLRYWISYKLNTDP- 194
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + +I+S PGEGEHK+M++IR + P ++PN RH LYGLDADLIM
Sbjct: 195 --------AWEKMKIIISDATVPGEGEHKVMNFIRSQRQDPSHDPNTRHVLYGLDADLIM 246
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTP----EETK------------------- 318
LGL THEP+F +LRE+V F + P EE +
Sbjct: 247 LGLATHEPHFRVLREDVFFQESRPRTCRLCGQPGHKAEECRGEAKEKNGEFDEKQKAAPL 306
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F L++S++R+YL +E ++ FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 307 KPFIWLNVSVLREYLAVELQVPQQ----RFPFDLERALDDWVFMCFFVGNDFLPHLPSLD 362
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I A+ LL +++E +P +D Y+ + G +N + L L + FR +
Sbjct: 363 IKENAIDLLISIWRENIPLMDDYVTKDGIVNFNHAQLILNGLGKQEDGIFRRR 415
Score = 163 bits (412), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 108/181 (59%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y +QW L YY GC SW+WYYP+HYAP+ +D D
Sbjct: 606 YYEQKFHVDPSNVEFRYQVARSYAEGLQWVLLYYMQGCPSWTWYYPYHYAPFAADFVDIG 665
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ +E G+PF PF+QL+ VLPA+S +PE + +LM+ NS I+++YPE+F DLNGK
Sbjct: 666 SMKPSFEKGKPFRPFEQLMGVLPASSNHAIPEIFHDLMSDPNSEIIDFYPEDFPVDLNGK 725
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDY 690
K W+ VVL+PFIDE +L+ AM+ LL+ +E +RN G ++ L LA ++
Sbjct: 726 KFAWQGVVLLPFIDETRLLAAMEKKYPLLSADEHARNTVGTDVLLISDQHPLYQELAANF 785
Query: 691 F 691
+
Sbjct: 786 Y 786
>gi|169763218|ref|XP_001727509.1| 5'-3' exoribonuclease 2 [Aspergillus oryzae RIB40]
gi|238489103|ref|XP_002375789.1| 5'->3' exoribonculease Dhp1 [Aspergillus flavus NRRL3357]
gi|115311954|sp|Q2UCP5.3|XRN2_ASPOR RecName: Full=5'-3' exoribonuclease 2
gi|83770537|dbj|BAE60670.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698177|gb|EED54517.1| 5'->3' exoribonculease Dhp1 [Aspergillus flavus NRRL3357]
Length = 1035
Score = 290 bits (741), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 171/473 (36%), Positives = 248/473 (52%), Gaps = 107/473 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S V+ E QIP E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEQPYEVNGEQIPVDTTRPNPNGEELDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P E+++ +IF+Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPP--PANEQEMMLEIFNYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA ++A EK E E R F+
Sbjct: 119 FRSAQEA----KEADEKKE----EFRKQFLK----------------------------- 141
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+S + E+ E+ +K +DSN ITPGTPFM L LRY++ K+ TD
Sbjct: 142 --KSKGDQEIHEEV---------IQKTWDSNVITPGTPFMDILAASLRYWIAYKLNTDP- 189
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + +I+S PGEGEHKIM+++R ++ P+++PN RH +YGLDADLIM
Sbjct: 190 --------AWEKLKIIISDATVPGEGEHKIMEFVRSQRAAPEHDPNTRHVIYGLDADLIM 241
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKG----GSQIVTPEETK------------------- 318
LGL THEP+F +LRE+V F + G EE +
Sbjct: 242 LGLATHEPHFRVLREDVFFQESKARTCHLCGQAGHKAEECRGQAKEKNGQFDEKGKGTSL 301
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F L++S++R+YL +E +P FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 302 KPFIWLNVSILREYLAVELYVPHQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLD 357
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I + L ++++ +P + GY+ + G++ K+ + L LA + FR +
Sbjct: 358 IRENGIDTLIAIWRDNIPVMGGYLTKDGHVEFKKAQLILQGLAKQEDAIFRRR 410
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 100/160 (62%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 596 YYEQKFGVDPQDKEFRHKVARAYAEGLAWVLLYYFQGCPSWNWYYPYHYAPFAADFVDIG 655
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ L +E G PF PF+QL+ VLPA+S +PE + +LM S I+++YPE+FA DLNGK
Sbjct: 656 DMELSFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMQDPESEIIDFYPEDFAVDLNGK 715
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V+L+PFIDE +L+ AM+ LL+D+ER RN G
Sbjct: 716 KFAWQGVILLPFIDEKRLLAAMEKKYPLLSDDERHRNTVG 755
>gi|391869656|gb|EIT78851.1| 5'-3' exonuclease [Aspergillus oryzae 3.042]
Length = 1035
Score = 290 bits (741), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 171/473 (36%), Positives = 248/473 (52%), Gaps = 107/473 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S V+ E QIP E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEQPYEVNGEQIPVDTTRPNPNGEELDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P E+++ +IF+Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPP--PANEQEMMLEIFNYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA ++A EK E E R F+
Sbjct: 119 FRSAQEA----KEADEKKE----EFRKQFLK----------------------------- 141
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+S + E+ E+ +K +DSN ITPGTPFM L LRY++ K+ TD
Sbjct: 142 --KSKGDQEIHEEV---------IQKTWDSNVITPGTPFMDILAASLRYWIAYKLNTDP- 189
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ + +I+S PGEGEHKIM+++R ++ P+++PN RH +YGLDADLIM
Sbjct: 190 --------AWEKLKIIISDATVPGEGEHKIMEFVRSQRAAPEHDPNTRHVIYGLDADLIM 241
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKG----GSQIVTPEETK------------------- 318
LGL THEP+F +LRE+V F + G EE +
Sbjct: 242 LGLATHEPHFRVLREDVFFQESKARTCHLCGQAGHKAEECRGQAKEKNGQFDEKGKGTSL 301
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F L++S++R+YL +E +P FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 302 KPFIWLNVSILREYLAVELYVPHQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLD 357
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I + L ++++ +P + GY+ + G++ K+ + L LA + FR +
Sbjct: 358 IRENGIDTLIAIWRDNIPVMGGYLTKDGHVEFKKAQLILQGLAKQEDAIFRRR 410
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 100/160 (62%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 596 YYEQKFGVDPQDKEFRHKVARAYAEGLAWVLLYYFQGCPSWNWYYPYHYAPFAADFVDIG 655
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ L +E G PF PF+QL+ VLPA+S +PE + +LM S I+++YPE+FA DLNGK
Sbjct: 656 DMELSFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMQDPESEIIDFYPEDFAVDLNGK 715
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V+L+PFIDE +L+ AM+ LL+D+ER RN G
Sbjct: 716 KFAWQGVILLPFIDEKRLLAAMEKKYPLLSDDERHRNTVG 755
>gi|346319605|gb|EGX89206.1| 5'-3' exoribonuclease Dhp1 [Cordyceps militaris CM01]
Length = 970
Score = 289 bits (740), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 175/475 (36%), Positives = 247/475 (52%), Gaps = 108/475 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY--------QIP-----------EFDNLYLDMNGII 40
MG+P FR++S +YP +S V+ + IP E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEDRPVVMEDGTAIPVDITRANPNGEELDNLYLDMNGIV 60
Query: 41 HNCSHPNDN-DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
H CSHP+D P E+++ +IF Y + + M++P+K+ +A+DGVAPRAKMNQQR
Sbjct: 61 HPCSHPDDKPAPE---DEEEMMLEIFKYTDRVLNMVRPRKILMIAVDGVAPRAKMNQQRS 117
Query: 100 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQR 159
RRFRSA+EA+ E +E I L + QQ
Sbjct: 118 RRFRSAQEAKDKENDKQE------------LIKL---------------------LKQQN 144
Query: 160 GRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTD 219
G + + E + +KA FD+N ITPGTPFM L LRY+ + K+ TD
Sbjct: 145 GGNL-ATESTEAIAKKA------------FDNNSITPGTPFMDILASSLRYWCQYKLNTD 191
Query: 220 KLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADL 279
W + VI+S PGEGEHKIM+++R ++ PDY+PN RH +YGLDADL
Sbjct: 192 P---------GWAKLKVIISDATVPGEGEHKIMNFVRSQRASPDYDPNTRHVIYGLDADL 242
Query: 280 IMLGLCTHEPYFSLLREEVKF-------------------NTKSNKGGSQIVTPEETK-- 318
IMLGL THEP+F +LRE+V F N K G E+ K
Sbjct: 243 IMLGLATHEPHFRVLREDVFFQDSKARTCKLCGQRGHDAQNCKGETKGKSGEVDEKDKPV 302
Query: 319 ----FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPD 374
F LH+S++R+YL E + P F F +E +IDDW+ M +GNDF+P+LP
Sbjct: 303 ILKPFIWLHVSVLREYLAAELAIPELP----FRFDLERVIDDWIFMCCFVGNDFLPHLPA 358
Query: 375 LHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
L I + L ++++ LP L GYI + G+++L+R + L LA + F+++
Sbjct: 359 LEIREHGIDTLTTIWKQNLPALGGYITKDGHIDLERAQCILDGLAGQEDMIFKKR 413
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 97/141 (68%)
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
A Y+ + W L YY+ GC SW WYYP+HYAP+ +D KD S N+ +E G PF+QL+
Sbjct: 593 AHAYVEGLAWVLQYYFQGCPSWEWYYPYHYAPFAADFKDISGANVAFEKGIISRPFEQLM 652
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
+VLPAAS++ LPE + +LMT +S I+++YPEEF DLNGKK W+ V L+PFI+ +L+
Sbjct: 653 SVLPAASRDNLPEIFHSLMTDRDSDIIDFYPEEFEVDLNGKKMAWQGVALLPFIEMDRLL 712
Query: 650 KAMDAVEHLLTDEERSRNRHG 670
+A+ LL+DE+ RN G
Sbjct: 713 EAVQRRYPLLSDEDSKRNGVG 733
>gi|341884867|gb|EGT40802.1| hypothetical protein CAEBREN_29959 [Caenorhabditis brenneri]
Length = 992
Score = 289 bits (739), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 177/490 (36%), Positives = 238/490 (48%), Gaps = 114/490 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ-------------------IPEFDNLYLDMNGIIH 41
MGVP FFR+++++YP E + EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTKKYPATIVNANEDRQRLDDGRRAPIDCTQPNPNFQEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP D P E ++F IF YI+ +F +++P++L +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEDRPPP--KNEDEMFALIFEYIDRIFSIVRPRRLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FR++KE +E+ RL E G+A K +
Sbjct: 119 FRASKEMAEKAASIEEQRRRLMAE----------------------GIAVPPKKEE---- 152
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
E FDSNCITPGTPFM RL LRY++ +IT D
Sbjct: 153 ------------------------EAHFDSNCITPGTPFMARLADALRYYIHDRITNDAA 188
Query: 222 WKDT----------------LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYN 265
W + S ++ + +ILS PGEGEHKIMDYIR + P ++
Sbjct: 189 WANIEFIPRIPRNYHQSYPEFSKFIEINFQIILSDANVPGEGEHKIMDYIRKQRGNPAHD 248
Query: 266 PNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFN--------------TKSNKG---- 307
PN HCL G DADLIMLG+ THE F+++REE N K +G
Sbjct: 249 PNTVHCLCGADADLIMLGIATHEANFNIIREEFVPNQPRACDLCGQYGHELKECRGAEND 308
Query: 308 ---GSQIVTPE--ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGF 362
G PE E F L + ++R+YLE E L F F +E +DDWV + F
Sbjct: 309 TDLGDDYCKPEQREKNFIFLRIPVLREYLEKEMAMPN----LPFQFDLERALDDWVFLCF 364
Query: 363 LIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFD 422
+GNDF+P+LP L I GA+ L K+Y+E++ + GY+ + G L R E + L +
Sbjct: 365 FVGNDFLPHLPSLEIREGAIDRLIKLYKEMVYEMKGYLTKDGIPELDRVEMIMKGLGKVE 424
Query: 423 FEQFREKYAD 432
E F+ + D
Sbjct: 425 DEIFKRRQQD 434
Score = 157 bits (397), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 101/173 (58%), Gaps = 1/173 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D E A Y+ + W L YYY GC SW WY+P+HYAP+ SD +
Sbjct: 563 KDRYYRAKFDVGSDDVEFRHRVAWAYVEGLCWVLRYYYQGCSSWDWYFPYHYAPFASDFE 622
Query: 568 DFSHLNLKYEM-GEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ +PF P +QL++V PAASK+ LP +Q LMT + SPI++ YP +F D
Sbjct: 623 TVGDFKPDFSRPTKPFNPLEQLMSVFPAASKQHLPVEWQKLMTEDESPIIDLYPADFRID 682
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSN 679
LNGKK W+ V L+PF+DE +L++ + V LTDEE+ RN GP ++ N
Sbjct: 683 LNGKKYAWQGVALLPFVDEQRLLETLKTVYPTLTDEEKMRNTRGPNRIFIGRN 735
>gi|302418923|ref|XP_003007292.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
gi|261352943|gb|EEY15371.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
Length = 894
Score = 289 bits (739), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 181/474 (38%), Positives = 241/474 (50%), Gaps = 106/474 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ---------IP-----------EFDNLYLDMNGII 40
MG+P FR++S +YP + V E Q IP E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEDQPLQMEDGTTIPVETTGPNPNGEEQDNLYLDMNGIV 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H CSHP D P + E+++ ++F Y + + M++P+KL +A+DGVAPRAKMNQQR R
Sbjct: 61 HPCSHPEDR-PAPK-DEEEMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFRSA+EA ++K +K E L KL G+ P
Sbjct: 119 RFRSAQEA---QEKEVDKQELL-----------------KLLKQQNGGILP--------- 149
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
E LE K K FDSN ITPGTPFM L LRY+ K+ TD
Sbjct: 150 --------PETLESMNK---------KAFDSNSITPGTPFMDTLATSLRYWCAYKLNTDP 192
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W + +I+S PGEGEHKIM+Y+R + PDY+PN RH +YGLDADLI
Sbjct: 193 ---------AWARLKIIISDATVPGEGEHKIMNYVRSQRGSPDYDPNTRHVIYGLDADLI 243
Query: 281 MLGLCTHEPYFSLLREEV--------KFNTKSNKGGSQIVTPEETK-------------- 318
MLGL THEP+F +LRE+V KG V E K
Sbjct: 244 MLGLATHEPHFRVLREDVFAQDAKAKMCKICGQKGHDARVCKGEAKDKDGEYDEQDKAVA 303
Query: 319 ---FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
F LH+S+ R+YL +E L P L F F +E IDDWV M +GNDF+P+LP L
Sbjct: 304 LKPFIWLHVSIFREYLAIE---LDVPD-LPFRFDLERAIDDWVFMCCFVGNDFLPHLPAL 359
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I + L +++E LP + GY+ + G+++LKR + + LA + F+ +
Sbjct: 360 EIRENGIDALTTIWKENLPHMGGYVTKDGHIDLKRVQLIMDGLAKQEDAIFKRR 413
Score = 128 bits (322), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 74/107 (69%)
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
A+ Y+ + W L YYY GC SW WYYP+HYAP+ +D D + + +E G PF+QL+
Sbjct: 603 AQAYVEGLCWVLLYYYQGCPSWDWYYPYHYAPFAADFADLDKIEISFEKGRISKPFEQLM 662
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEA 636
+V+PAAS+ LPE + +LM E+S ++++YP+EF DLNGKK W+A
Sbjct: 663 SVMPAASRRALPEVFHDLMLNEDSEVIDFYPQEFEIDLNGKKFAWQA 709
>gi|343427909|emb|CBQ71434.1| related to dna exoribonuclease Dhp1p [Sporisorium reilianum SRZ2]
Length = 1251
Score = 288 bits (736), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 179/473 (37%), Positives = 238/473 (50%), Gaps = 120/473 (25%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE-------------YQIP-----------EFDNLYLDM 36
MGVP FR++S++YP + V+E +P EFD LYLDM
Sbjct: 1 MGVPALFRWLSKKYPRIVSSVQEEDPATAPGPDGTEITLPLDTSTPNPNGEEFDCLYLDM 60
Query: 37 NGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQ 96
NGI+H C+HP E + F Y E + M++P++L MAIDGVAPRAKMNQ
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEV--FAYTERVVNMVRPRRLLMMAIDGVAPRAKMNQ 118
Query: 97 QRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMN 156
QR RRFR+AKE A+EK E
Sbjct: 119 QRSRRFRAAKE-------AREKHEE----------------------------------- 136
Query: 157 QQRGRRFRSAKEAEVLEQKAKE---KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVK 213
KEA + E KAK + L ++K +DSN ITPGTPFM L LRY+V
Sbjct: 137 ----------KEAALAEWKAKGLPVTDDALQSKKAWDSNAITPGTPFMDLLAASLRYWVA 186
Query: 214 LKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLY 273
KI +D WKDV VI+S PGEGEHKIM++IR +S P+++PN +H +Y
Sbjct: 187 QKINSDP---------GWKDVQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIY 237
Query: 274 GLDADLIMLGLCTHEPYFSLLREEV-------------------------KFNTKSNKGG 308
GLDADLIML L THEPYF +LRE+V KS +
Sbjct: 238 GLDADLIMLSLATHEPYFKVLREDVFAADNKPKTCNLCGQPGHFAASCTGAAKKKSGEHD 297
Query: 309 SQIVTPEETK-FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGND 367
TP E K F L ++ +R+YLE+E + L F F +E IDDWV + F +GND
Sbjct: 298 EIAPTPPEKKPFIFLDVATLREYLEVELNIPQ----LPFAFDLERAIDDWVFLIFFVGND 353
Query: 368 FIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F+P+LP L I +GA+ L +++++ LP + GY+ G + L R + L+ LAS
Sbjct: 354 FLPHLPSLEIRDGAIDTLLRIWKKELPAMGGYLTNHGRVELGRAQIILSGLAS 406
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 105/176 (59%)
Query: 507 HKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI 566
++ YY K + R + YI + W L YYY G SW WYYP H++P+ +D
Sbjct: 658 YRERYYKEKFGVDLSDTDFRRQVVKSYIEGLCWVLAYYYQGVPSWQWYYPFHFSPFAADF 717
Query: 567 KDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+D L++K+E+G PF PF+QL+ VLPA S+ +P + LMT +S I+++YP EF D
Sbjct: 718 EDLESLDIKFELGAPFKPFEQLMGVLPADSRASIPPAFHPLMTESDSEIIDFYPSEFEID 777
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNL 682
+NGKK W+ V L+PFIDE +L+ A++ LL+D+E RN G ++ S L
Sbjct: 778 MNGKKMAWQGVALLPFIDEKRLLDALNEKYPLLSDDEVRRNGFGNNTLFVGSESRL 833
>gi|400592939|gb|EJP60965.1| XRN 5'-3' exonuclease [Beauveria bassiana ARSEF 2860]
Length = 968
Score = 288 bits (736), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 177/477 (37%), Positives = 246/477 (51%), Gaps = 109/477 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY--------QIP-----------EFDNLYLDMNGII 40
MG+P FR++S +YP +S VV + +IP E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEDRPIVMDDGTEIPVDITRANPNGEELDNLYLDMNGIV 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C+HP D P + E+++ +IF Y + + M++P+K+ +A+DGVAPRAKMNQQR R
Sbjct: 61 HPCAHPEDK-PAPK-DEEEMMLEIFKYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFRSA+EA+ E +E I L + QQ G
Sbjct: 119 RFRSAQEAKEKENDKQE------------LIKL---------------------LKQQNG 145
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
+ V T+K FD+N ITPGTPFM L LRY+ + K+ TD
Sbjct: 146 GSLTAESTESV-------------TKKAFDNNSITPGTPFMDILASSLRYWCQYKLNTDP 192
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W + VI+S PGEGEHKIM+++R ++ PDY+PN RH +YGLDADLI
Sbjct: 193 ---------GWAKLKVIISDATVPGEGEHKIMNFVRSQRASPDYDPNTRHVIYGLDADLI 243
Query: 281 MLGLCTHEPYFSLLREEVKFNTK--------SNKGGSQIVTPEETK-------------- 318
MLGL THEP+F +LRE+V F KG ETK
Sbjct: 244 MLGLATHEPHFRVLREDVFFQDSKARACKLCGQKGHDAQNCKGETKEPTEEFDAKNNALT 303
Query: 319 ---FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
F LH+S++R+YL E + P F F +E +IDDW+ M +GNDF+P+LP L
Sbjct: 304 LKPFIWLHVSVLREYLAAELAIPELP----FRFDLERVIDDWIFMCCFVGNDFLPHLPAL 359
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFD---FEQFREK 429
I + L +++ LP L GYI + G+++L+R + L LA + F++ RE+
Sbjct: 360 EIREHGIDTLTTIWKRNLPALGGYITKDGHIDLERAQCILDGLAGQEDMIFKKRREQ 416
Score = 162 bits (410), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 98/141 (69%)
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
A Y+ + W L YY+ GC SW WYYP+HYAP+ +D KD S N+ +E G PF+QL+
Sbjct: 593 AHAYVEGLAWVLQYYFQGCPSWEWYYPYHYAPFAADFKDISQANVTFEKGTVSRPFEQLM 652
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
+VLPAAS++ LPE + +LMT ++S I+++YPEEF DLNGKK W+ V L+PFI+ +L+
Sbjct: 653 SVLPAASRDNLPEVFHSLMTDQDSLIIDFYPEEFEVDLNGKKMAWQGVALLPFIEMDRLL 712
Query: 650 KAMDAVEHLLTDEERSRNRHG 670
A+ LL+DE+R RN G
Sbjct: 713 AAVQKRYPLLSDEDRKRNGVG 733
>gi|310796685|gb|EFQ32146.1| XRN 5'-3' exonuclease [Glomerella graminicola M1.001]
Length = 1020
Score = 288 bits (736), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 176/474 (37%), Positives = 245/474 (51%), Gaps = 106/474 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE--------YQIP-----------EFDNLYLDMNGII 40
MG+P FR++S +YP +S V+ E +IP E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEEQPVKMEDGSEIPVDTMGPNPNGEELDNLYLDMNGIV 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H CSHP D P + E+++ ++F Y + + M++P+KL +A+DGVAPRAKMNQQR R
Sbjct: 61 HPCSHPEDR-PAPK-DEEEMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFRSA+EA+ E+ +E LK + QQ G
Sbjct: 119 RFRSAQEAQEKEEDKQE--------------LLKL-------------------LKQQSG 145
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
+ V T+K FDSN ITPGTPFM L LRY+ K+ TD
Sbjct: 146 GIVSNDSLESV-------------TKKAFDSNSITPGTPFMDILAASLRYWCAYKLNTDP 192
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W + +I+S PGEGEHKIM+++R + PDY+PN RH +YGLDADLI
Sbjct: 193 ---------AWARLKIIISDATVPGEGEHKIMNFVRSQRISPDYDPNTRHVIYGLDADLI 243
Query: 281 MLGLCTHEPYFSLLREEVKFN----------------TKSNKGGS---------QIVTPE 315
MLGL THEP+F +LRE+V F ++ +G + Q P
Sbjct: 244 MLGLATHEPHFRVLREDVFFQDSKAKMCKLCGQKGHEARACRGQAKEKVGEFDEQEKGPA 303
Query: 316 ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
F LH+S++R+YL E L PG L F F +E IDDWV M +GNDF+P+LP L
Sbjct: 304 LKPFIWLHVSILREYLAAE---LNVPG-LPFRFDLERAIDDWVFMCCFVGNDFLPHLPAL 359
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I + L ++++ LP + GY+ + G+++L R + L LA + F+ +
Sbjct: 360 EIRENGIDTLTAIWKDNLPVMGGYVVKDGHVDLGRAQLILNGLAKQEDSIFKRR 413
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 101/160 (63%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K + +E A Y+ + W L YY+ GC SW WYYP+HYAP+ +D D
Sbjct: 571 YYEQKFHVDRNDHEFRHKVARAYVEGLSWVLLYYFQGCPSWEWYYPYHYAPFAADFVDLD 630
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+++++E G PF+QL++V+PAAS+ LPE + +LM E+S ++++YP EF DLNGK
Sbjct: 631 KMDVRFEKGRISKPFEQLMSVMPAASRSALPEVFHDLMLNEDSEVIDFYPTEFEIDLNGK 690
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V L+PFI+ +L+ A++ LL+ +++RN G
Sbjct: 691 KMAWQGVALLPFIEMPRLLAAVEKKYPLLSAADQARNGVG 730
>gi|407922574|gb|EKG15671.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 1073
Score = 287 bits (735), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 169/474 (35%), Positives = 244/474 (51%), Gaps = 98/474 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIP-------------------EFDNLYLDMNGII 40
MGVP FR++S +YP +S VV + EFDNLYLDMNGI+
Sbjct: 1 MGVPALFRWLSTKYPKIVSSVVEAEPVEYPDGTVEPVDTTKPNPNGEEFDNLYLDMNGIV 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H CSHP D DP E+++ ++F Y + + M++P+KL +A+DGVAPRAKMNQQR R
Sbjct: 61 HPCSHPEDKDP--PENEEEMMIEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+A++A+ + A E + L ++K+ +RG
Sbjct: 119 RFRAAQDAKQKDADAAEFAKMLASQKK-----------------------------NRRG 149
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
+E Q K K +DSN ITPGTPFM L + LRY+ K+ TD
Sbjct: 150 SGSDEDEEESAEAQIVK---------KTWDSNSITPGTPFMDILAKSLRYWCAYKLNTDP 200
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W+ + VI+S PGEGEHKIM+++R + P ++PN RH +YGLDADLI
Sbjct: 201 ---------GWEKLKVIISDATVPGEGEHKIMEFVRSQRRSPFHDPNTRHVIYGLDADLI 251
Query: 281 MLGLCTHEPYFSLLREEVKFN-----------------------TKSNKGGSQIVTPEET 317
MLGL THEP+F +LRE+V FN K + + + T
Sbjct: 252 MLGLATHEPHFRVLREDVFFNDAKPRTCRRCGQTGHYADQCRGEMKKKEDEHDVKQNKVT 311
Query: 318 K--FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
K F LH+S++R+YL E + F F +E +DDWV M F +GNDF+P+LP L
Sbjct: 312 KKPFIWLHVSILREYLAAEMFVENQ----GFAFDLERALDDWVFMCFFVGNDFLPHLPSL 367
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I + L +++E +P + GY+ + G++++ R + L LA + F+ +
Sbjct: 368 EIREQGIDTLINIWRENIPRMGGYVTKDGHVDMNRAQLILEGLAKLEDGIFKRR 421
Score = 167 bits (424), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 112/180 (62%), Gaps = 7/180 (3%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
D+ W + + + K +H + ++V RD AE + W L YY+ GC S
Sbjct: 602 DDVRMWEEGYADRYYEQK---FHVDPKDIEFRHQVARDYAE----GLAWVLLYYFQGCPS 654
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
W+WYYPHHYAP+ D D + LK+E G+PF P++QL+ VLPAAS +PE ++ LM
Sbjct: 655 WTWYYPHHYAPFAQDFVDLGKMELKFEKGQPFRPYEQLMGVLPAASNHAIPEVFRPLMEE 714
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
++S I+++YPE+F DLNGKK W+ V ++PFIDE +L+KAM+ LL+ EE +RN G
Sbjct: 715 QDSDIIDFYPEDFVVDLNGKKMAWQGVAILPFIDEKRLLKAMNTKYPLLSAEEHARNEFG 774
>gi|60677951|gb|AAX33482.1| RE02462p [Drosophila melanogaster]
Length = 519
Score = 287 bits (735), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 183/478 (38%), Positives = 247/478 (51%), Gaps = 118/478 (24%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE------------YQIP--------EFDNLYLDMNGII 40
MGVP FFR++S +YP + E Y+ P EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKQVDADTGRNIYEDPTLPNPNGIEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C+HP D P + E ++ IF I+ LF +++P+KL +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCTHPEDK-PAPK-NEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AKE TEKR + ++
Sbjct: 119 RFRAAKET---------------TEKRLEIARIR-------------------------- 137
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKI 216
E+L +G +LP EK FDSNCITPGTPFM RL + L YFV +
Sbjct: 138 --------EELL-----SRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFVHDRQ 184
Query: 217 TTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLD 276
+ WK + VILS PGEGEHKIMDYIR +++PD++PN +H L G D
Sbjct: 185 NNNP---------AWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGAD 235
Query: 277 ADLIMLGLCTHEPYFSLLREEV------------KFNTKSNKG-GSQIVTP--------- 314
ADLIMLGL THEP F+++REE F + +K G P
Sbjct: 236 ADLIMLGLATHEPNFTIIREEFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPDV 295
Query: 315 ---EETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPN 371
E KF + LS++R+YL+ L+ P L F +S E +DDWV M F +GNDF+P+
Sbjct: 296 PIGAEVKFIFVRLSVLREYLK---QTLEMPN-LPFEYSFERALDDWVFMCFFVGNDFLPH 351
Query: 372 LPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
LP L I GA+ L ++Y++ + GY+ + G +NL R + +T L + + + F+ +
Sbjct: 352 LPSLEIREGAVDRLVELYKKCVYKTRGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSR 409
>gi|425770113|gb|EKV08587.1| 5'-3' exoribonuclease 2 [Penicillium digitatum Pd1]
gi|425771660|gb|EKV10097.1| 5'-3' exoribonuclease 2 [Penicillium digitatum PHI26]
Length = 1036
Score = 287 bits (734), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 249/482 (51%), Gaps = 115/482 (23%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP + ++VV +IP E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSTKYPKIVSPVIEEQAQVVDGEEIPIDITRPNPNGEEQDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P E+++ +I+ Y + + M++P+KL +AIDGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPPP--ADEQEMMMEIYKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRARR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FR+A+EA+ +QK +E + L
Sbjct: 119 FRAAQEAKENDQKKEELQKML--------------------------------------- 139
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTE----KRFDSNCITPGTPFMCRLHQQLRYFVKLKIT 217
+Q + GE+L E K +DSN ITPGTPFM L LRY++ K+
Sbjct: 140 ----------AQQHVAKTGEQLVREEVVQKTWDSNVITPGTPFMDILAASLRYWIAYKLN 189
Query: 218 TDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDA 277
TD W+++ +I+S PGEGEHKIM+++R ++ P+++PN RH +YGLDA
Sbjct: 190 TDP---------GWENLKIIISDATVPGEGEHKIMNFVRSQRASPNHDPNTRHVIYGLDA 240
Query: 278 DLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVT------------PEETK------- 318
DLIMLGL THEPYF +LRE+V F S G ++ P+E
Sbjct: 241 DLIMLGLGTHEPYFRVLREDV-FAQDSRPRGCRLCGQTGHKAEECLGRPKEKSGEFDEKQ 299
Query: 319 -------FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPN 371
F LH++++R+YL +E ++P FPF +E +DDWV M F +GNDF+P+
Sbjct: 300 HAAPLKPFIWLHVAVLREYLAVELRVPQQP----FPFDLERALDDWVFMCFFVGNDFLPH 355
Query: 372 LPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF-REKY 430
LP L I + L ++++ LP + Y+ + G + LK + L LA + F R +
Sbjct: 356 LPSLDIRENGIDTLIAIWRDNLPAMGSYLTKDGSVELKNAQIILQGLAKQEDAIFARRRQ 415
Query: 431 AD 432
AD
Sbjct: 416 AD 417
Score = 163 bits (412), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 126/237 (53%), Gaps = 25/237 (10%)
Query: 438 GKMGKKFSDVFHKEKSKEMDPD----LAALIKATDDDYDDGTEEVLNYANYEEYYYSDED 493
G +GK+ +DV ++ ++ P LA L A D+ E+ +
Sbjct: 545 GVLGKRKADVAEQDVTEAGTPGRDSPLANLAVAEKPKQDEAPEDTVKL------------ 592
Query: 494 EEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSW 553
W + YY K E A Y + W L YY+ GC SW+W
Sbjct: 593 --WEPGYADR-------YYEQKFGVDPKDLEFRHQVAREYAIGLCWVLRYYFQGCPSWTW 643
Query: 554 YYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENS 613
YYP HYAP+ +D D + +++++E G F PF+QL+ VLPAAS LP+ + LM +S
Sbjct: 644 YYPRHYAPFAADFVDIADMDVQFEKGTIFKPFEQLMGVLPAASNHALPKVFHPLMENPDS 703
Query: 614 PILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
I+++YPE+F DLNGKK W+ V+L+PFIDE +L+ AM V LLT++E+SRN HG
Sbjct: 704 EIIDFYPEDFPLDLNGKKFAWQGVILLPFIDETRLLNAMAKVYPLLTEDEKSRNSHG 760
>gi|392870672|gb|EAS32493.2| 5'-3' exoribonuclease 2 [Coccidioides immitis RS]
Length = 1016
Score = 286 bits (733), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 173/463 (37%), Positives = 238/463 (51%), Gaps = 105/463 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S VV E + P E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSTKYPKIISAVVEELPQEIDGEEFPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP E ++ +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPAP--ANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA+ ++K E F K L Q RG+
Sbjct: 119 FRSAQEAKEADEKKAE-------------------FAKLL-------------RQQNRGK 146
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ E+ E+ +K +DSN ITPGTPFM L LRY+V K+ TD
Sbjct: 147 -----GDMEIAEEV---------VQKTWDSNVITPGTPFMDILSAALRYWVAYKLNTDP- 191
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ V +I+S PGEGEHKIM++IR +S P+++ N RH +YGLDADLIM
Sbjct: 192 --------AWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANTRHVIYGLDADLIM 243
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKG----GSQIVTPEETK------------------- 318
LGL THEP+F +LRE+V F + G Q E
Sbjct: 244 LGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEKNGEFDEKQRGTPL 303
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F LH+S++R+YL E +P FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 304 KPFIWLHVSVLREYLAAEMYVPNQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLE 359
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
I + L ++++ +P + GY+ + G ++LKR + L LA
Sbjct: 360 IRENGIDTLIAIWRDNIPLMGGYLTQDGNVDLKRAQLILQGLA 402
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 111/181 (61%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 585 YYEQKFHVDPKDIEFRHKVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLE 644
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
H+++++ G PF PF+QL+ VLPAAS +PE +++LM+ S I+++YPEEF DLNGK
Sbjct: 645 HMDIQFHKGAPFRPFEQLMGVLPAASNHAIPEIFRDLMSNPESEIIDFYPEEFPIDLNGK 704
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDY 690
K W+ V L+PFIDE +L++AM L++EE++RN G +++ L L ++
Sbjct: 705 KFAWQGVALLPFIDESRLLEAMAKRYPRLSEEEKARNEMGRDILFISDRHPLYKELVANF 764
Query: 691 F 691
+
Sbjct: 765 Y 765
>gi|320038785|gb|EFW20720.1| 5'-3' exoribonculease Dhp1 [Coccidioides posadasii str. Silveira]
Length = 1016
Score = 286 bits (733), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 173/463 (37%), Positives = 238/463 (51%), Gaps = 105/463 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S VV E + P E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSTKYPKIISAVVEELPQEIDGEEFPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP E ++ +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPAP--ANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA+ ++K E F K L Q RG+
Sbjct: 119 FRSAQEAKEADEKKAE-------------------FAKLL-------------RQQNRGK 146
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ E+ E+ +K +DSN ITPGTPFM L LRY+V K+ TD
Sbjct: 147 -----GDMEIAEEV---------VQKTWDSNVITPGTPFMDILSAALRYWVAYKLNTDP- 191
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ V +I+S PGEGEHKIM++IR +S P+++ N RH +YGLDADLIM
Sbjct: 192 --------AWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANTRHVIYGLDADLIM 243
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKG----GSQIVTPEETK------------------- 318
LGL THEP+F +LRE+V F + G Q E
Sbjct: 244 LGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEKNGEFDEKQRGTPL 303
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F LH+S++R+YL E +P FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 304 KPFIWLHVSVLREYLAAEMYVPNQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLE 359
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
I + L ++++ +P + GY+ + G ++LKR + L LA
Sbjct: 360 IRENGIDTLIAIWRDNIPLMGGYLTQDGNVDLKRAQLILQGLA 402
Score = 166 bits (419), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 111/181 (61%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 585 YYEQKFHVDPKDIEFRHKVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLE 644
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
H+++++ G PF PF+QL+ VLPAAS +PE +++LM+ S I+++YPEEF DLNGK
Sbjct: 645 HMDIQFHKGAPFRPFEQLMGVLPAASNHAIPEIFRDLMSNPESEIIDFYPEEFPIDLNGK 704
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDY 690
K W+ V L+PFIDE +L++AM L++EE++RN G +++ L L ++
Sbjct: 705 KFAWQGVALLPFIDESRLLEAMAKRYPRLSEEEKARNEMGRDILFISDRHPLYKELVANF 764
Query: 691 F 691
+
Sbjct: 765 Y 765
>gi|119186689|ref|XP_001243951.1| hypothetical protein CIMG_03392 [Coccidioides immitis RS]
Length = 1031
Score = 286 bits (733), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 173/463 (37%), Positives = 238/463 (51%), Gaps = 105/463 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S VV E + P E DNLYLDMNGI+H
Sbjct: 16 MGVPALFRWLSTKYPKIISAVVEELPQEIDGEEFPVDTTKPNPNGEEMDNLYLDMNGIVH 75
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP E ++ +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 76 PCTHPEGKPAP--ANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 133
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA+ ++K E F K L Q RG+
Sbjct: 134 FRSAQEAKEADEKKAE-------------------FAKLL-------------RQQNRGK 161
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ E+ E+ +K +DSN ITPGTPFM L LRY+V K+ TD
Sbjct: 162 -----GDMEIAEEV---------VQKTWDSNVITPGTPFMDILSAALRYWVAYKLNTDP- 206
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ V +I+S PGEGEHKIM++IR +S P+++ N RH +YGLDADLIM
Sbjct: 207 --------AWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANTRHVIYGLDADLIM 258
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKG----GSQIVTPEETK------------------- 318
LGL THEP+F +LRE+V F + G Q E
Sbjct: 259 LGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEKNGEFDEKQRGTPL 318
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F LH+S++R+YL E +P FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 319 KPFIWLHVSVLREYLAAEMYVPNQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLE 374
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
I + L ++++ +P + GY+ + G ++LKR + L LA
Sbjct: 375 IRENGIDTLIAIWRDNIPLMGGYLTQDGNVDLKRAQLILQGLA 417
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 111/181 (61%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 600 YYEQKFHVDPKDIEFRHKVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLE 659
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
H+++++ G PF PF+QL+ VLPAAS +PE +++LM+ S I+++YPEEF DLNGK
Sbjct: 660 HMDIQFHKGAPFRPFEQLMGVLPAASNHAIPEIFRDLMSNPESEIIDFYPEEFPIDLNGK 719
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDY 690
K W+ V L+PFIDE +L++AM L++EE++RN G +++ L L ++
Sbjct: 720 KFAWQGVALLPFIDESRLLEAMAKRYPRLSEEEKARNEMGRDILFISDRHPLYKELVANF 779
Query: 691 F 691
+
Sbjct: 780 Y 780
>gi|303317580|ref|XP_003068792.1| XRN 5'-3' exonuclease N-terminus domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240108473|gb|EER26647.1| XRN 5'-3' exonuclease N-terminus domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 1016
Score = 286 bits (733), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 173/463 (37%), Positives = 238/463 (51%), Gaps = 105/463 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S VV E + P E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSTKYPKIISAVVEELPQEIDGEEFPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP E ++ +IF Y + + M++P+KL +A+DGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGKPAP--ANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA+ ++K E F K L Q RG+
Sbjct: 119 FRSAQEAKEADEKKAE-------------------FAKLL-------------RQQNRGK 146
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ E+ E+ +K +DSN ITPGTPFM L LRY+V K+ TD
Sbjct: 147 -----GDMEIAEEV---------VQKTWDSNVITPGTPFMDILSAALRYWVAYKLNTDP- 191
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+ V +I+S PGEGEHKIM++IR +S P+++ N RH +YGLDADLIM
Sbjct: 192 --------AWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANTRHVIYGLDADLIM 243
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKG----GSQIVTPEETK------------------- 318
LGL THEP+F +LRE+V F + G Q E
Sbjct: 244 LGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEKNGEFDEKQRGTPL 303
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F LH+S++R+YL E +P FPF +E +DDWV M F +GNDF+P+LP L
Sbjct: 304 KPFIWLHVSVLREYLAAEMYVPNQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLE 359
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
I + L ++++ +P + GY+ + G ++LKR + L LA
Sbjct: 360 IRENGIDTLIAIWRDNIPLMGGYLTQDGNVDLKRAQLILQGLA 402
Score = 166 bits (419), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 111/181 (61%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 585 YYEQKFHVDPKDIEFRHKVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLE 644
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
H+++++ G PF PF+QL+ VLPAAS +PE +++LM+ S I+++YPEEF DLNGK
Sbjct: 645 HMDIQFHKGAPFRPFEQLMGVLPAASNHAIPEIFRDLMSNPESEIIDFYPEEFPIDLNGK 704
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDY 690
K W+ V L+PFIDE +L++AM L++EE++RN G +++ L L ++
Sbjct: 705 KFAWQGVALLPFIDESRLLEAMAKRYPRLSEEEKARNEMGRDILFISDRHPLYRELVANF 764
Query: 691 F 691
+
Sbjct: 765 Y 765
>gi|85078982|ref|XP_956265.1| hypothetical protein NCU01643 [Neurospora crassa OR74A]
gi|74630414|sp|Q8WZX5.3|XRN2_NEUCR RecName: Full=5'-3' exoribonuclease 2
gi|18307456|emb|CAD21516.1| related to dna exoribonuclease Dhp1p [Neurospora crassa]
gi|28917321|gb|EAA27029.1| hypothetical protein NCU01643 [Neurospora crassa OR74A]
Length = 1072
Score = 286 bits (733), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 176/475 (37%), Positives = 251/475 (52%), Gaps = 108/475 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ---------IP-----------EFDNLYLDMNGII 40
MG+P FR++S +YP + V E Q IP EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDQPITMPDGTVIPVDATKPNPNGEEFDNLYLDMNGIV 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H CSHP D P + E+++ ++F Y + + M++P+KL +A+DGVAPRAKMNQQR R
Sbjct: 61 HPCSHPEDR-PAPK-DEEEMMVEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+A+EA +E++ E + F+ L + +Q G
Sbjct: 119 RFRAAREA--MEKE----------EDKQKFVEL---------------------LKKQNG 145
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
+ +E+ + +K FDSN ITPGTPFM L LRY+ K+ TD
Sbjct: 146 K-------------PQEEEPVEVVVKKAFDSNSITPGTPFMDILAASLRYWCSYKLNTDP 192
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W ++ VI+S PGEGEHKIM+++R + P+++PN RH +YGLDADLI
Sbjct: 193 ---------AWANIKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGLDADLI 243
Query: 281 MLGLCTHEPYFSLLREEVKFNTKS---------NKGGSQIVTPEETK------------- 318
MLGL THEP+F +LRE+V F S KG + E K
Sbjct: 244 MLGLATHEPHFRVLREDV-FAQDSRPRLCKICGQKGHDAMNCKGEAKEKNGEFDEKDAVV 302
Query: 319 ----FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPD 374
F LH+S++R+YL +E L PG L F F++E IDDWV M F +GNDF+P+LP
Sbjct: 303 PLKPFIWLHVSILREYLAIE---LDVPG-LPFQFNLERAIDDWVFMCFFVGNDFLPHLPA 358
Query: 375 LHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
L I + L ++++ LP + GY+ + G+ +L+R + + LA + FR +
Sbjct: 359 LEIRENGIDTLTAIWKDNLPVMGGYLTKDGHADLERVQYIMAGLAKQEDAIFRRR 413
Score = 154 bits (388), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 95/160 (59%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K + + Y + W L YY+ GC SW W+YP+HYAP+ +D D
Sbjct: 591 YYEQKFKVDRKDIDFRHKVGRAYAEGLAWVLEYYFQGCPSWEWFYPYHYAPFAADFVDLG 650
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ +K+E G PF+QL++VLPAAS+ +PE + +LM E S I +YP++F DLNGK
Sbjct: 651 KMEIKFEKGRISRPFEQLMSVLPAASRHAIPEVFHSLMLEETSEIRHFYPDDFEIDLNGK 710
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V L+PFID +L+ AM+ HLL+ E+ RN G
Sbjct: 711 KMAWQGVALLPFIDMPRLLAAMETKSHLLSPEDHLRNAPG 750
>gi|71024163|ref|XP_762311.1| hypothetical protein UM06164.1 [Ustilago maydis 521]
gi|74698979|sp|Q4P149.3|XRN2_USTMA RecName: Full=5'-3' exoribonuclease 2
gi|46101835|gb|EAK87068.1| hypothetical protein UM06164.1 [Ustilago maydis 521]
Length = 1233
Score = 285 bits (730), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 177/479 (36%), Positives = 241/479 (50%), Gaps = 120/479 (25%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE-------------YQIP-----------EFDNLYLDM 36
MGVP FR++S++YP + V+E +P EFD LYLDM
Sbjct: 1 MGVPALFRWLSKKYPRIVSSVQEEDPKTAPGPDGTEITLPLDTSTPNPNGEEFDCLYLDM 60
Query: 37 NGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQ 96
NGI+H C+HP E + F Y E + M++P++L MAIDGVAPRAKMNQ
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEV--FAYTERVVNMVRPRRLLMMAIDGVAPRAKMNQ 118
Query: 97 QRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMN 156
QR RRFR+AKE A+EK E
Sbjct: 119 QRSRRFRAAKE-------AREKHEE----------------------------------- 136
Query: 157 QQRGRRFRSAKEAEVLEQKAKEKG---ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVK 213
++A + E KAK G + +++ +DSN ITPGTPFM L LRY+V
Sbjct: 137 ----------EQAALAEWKAKGLGATDDEKKSKRAWDSNAITPGTPFMDLLAASLRYWVA 186
Query: 214 LKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLY 273
KI +D WKD+ VI+S PGEGEHKIM++IR +S P+++PN +H +Y
Sbjct: 187 QKINSDP---------GWKDIQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIY 237
Query: 274 GLDADLIMLGLCTHEPYFSLLREEV-------------------------KFNTKSNKGG 308
GLDADLIML L THEPYF +LRE+V KS +
Sbjct: 238 GLDADLIMLSLATHEPYFKVLREDVFAADNKPKTCNLCGQPGHFAASCTGAAKKKSGQHD 297
Query: 309 SQIVTPEETK-FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGND 367
TP E K F L ++ +R+YLE+E + P F F +E IDDWV + F +GND
Sbjct: 298 EIAPTPPEKKPFIFLDVATLREYLEVELNIPQLP----FAFDLERAIDDWVFLIFFVGND 353
Query: 368 FIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF 426
F+P+LP L I +GA+ L +++++ LP + GY+ G + L R + L+ LAS + E F
Sbjct: 354 FLPHLPSLEIRDGAIDTLLRIWKKELPAMGGYLTNHGRVELGRAQLILSGLASEEDEIF 412
Score = 153 bits (387), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 100/164 (60%)
Query: 507 HKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI 566
++ YY K + R + YI + W L YYY G SW WYYP H++P+ +D
Sbjct: 670 YRERYYKEKFGVDLSDTDFRRSVVKSYIEGLCWVLAYYYQGVPSWQWYYPFHFSPFAADF 729
Query: 567 KDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+D L++++++G PF PF+QL+ VLPA S+ +P + LMT +S I+++YP EF D
Sbjct: 730 EDLESLDIQFQLGSPFKPFEQLMGVLPADSRASIPPAFHPLMTESDSDIIDFYPSEFEID 789
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
+NGKK W+ V L+PFIDE +L+ A+ LL+++E RN G
Sbjct: 790 MNGKKMAWQGVALLPFIDEKRLLDALKERYPLLSEDEVRRNGFG 833
>gi|380484893|emb|CCF39710.1| XRN 5'-3' exonuclease [Colletotrichum higginsianum]
Length = 1015
Score = 285 bits (729), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 176/474 (37%), Positives = 244/474 (51%), Gaps = 106/474 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE--------YQIP-----------EFDNLYLDMNGII 40
MG+P FR++S +YP +S V+ E +IP E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEEQPVKMEDGSEIPVDTTGPNPNGEELDNLYLDMNGIV 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H CSHP D P + E+++ ++F Y + + M++P+KL +A+DGVAPRAKMNQQR R
Sbjct: 61 HPCSHPEDR-PAPK-DEEEMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFRSA+EA+ E+ +E LK + QQ G
Sbjct: 119 RFRSAQEAQEKEEDKQE--------------LLKL-------------------LKQQNG 145
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
V+ + E T+K FDSN ITPGTPFM L LRY+ K+ TD
Sbjct: 146 ---------GVVSDDSLES----VTKKAFDSNSITPGTPFMDILAASLRYWCAYKLNTDP 192
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W + +I+S PGEGEHKIM+++R + PD++PN RH +YGLDADLI
Sbjct: 193 ---------AWAKLKIIISDATVPGEGEHKIMNFVRSQRISPDFDPNTRHVIYGLDADLI 243
Query: 281 MLGLCTHEPYFSLLREEVKFNTK--------SNKGGSQIVTPEETK-------------- 318
MLGL THEP+F +LRE+V F KG + K
Sbjct: 244 MLGLATHEPHFRVLREDVFFQDSKARMCKLCGQKGHEARACRGQAKEKVGEFDEQEKNLA 303
Query: 319 ---FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
F LH+S++R+YL E L PG L F F +E IDDWV M +GNDF+P+LP L
Sbjct: 304 LKPFIWLHVSILREYLAAE---LNVPG-LPFRFDLERAIDDWVFMCCFVGNDFLPHLPAL 359
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I + L ++++ LP + GY+ + G+++L R + L LA + F+ +
Sbjct: 360 EIRENGIDTLTAIWKDNLPFMGGYVVKDGHVDLGRAQLILNGLAKQEDAIFKRR 413
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 100/160 (62%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K + +E A Y+ + W L YY+ GC SW WYYP+HYAP+ +D D
Sbjct: 571 YYEQKFHVDRSDHEFRHKVARAYVEGLSWVLLYYFQGCPSWEWYYPYHYAPFAADFVDLD 630
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ +++E G PF+QL++V+PAAS+ LPE + +LM E+S ++++YP EF DLNGK
Sbjct: 631 KMEVQFEKGRISKPFEQLMSVMPAASRSALPEVFHDLMLNEDSEVIDFYPTEFEIDLNGK 690
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V L+PFI+ +L+ A++ LL+ +++RN G
Sbjct: 691 KMAWQGVALLPFIEMPRLLAAVEKKYPLLSAADQARNGVG 730
>gi|390354472|ref|XP_786402.3| PREDICTED: 5'-3' exoribonuclease 2-like [Strongylocentrotus
purpuratus]
Length = 803
Score = 285 bits (729), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 184/554 (33%), Positives = 289/554 (52%), Gaps = 50/554 (9%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRF------RSAKEAEVLEQ-KAKEKGERLPTEKRFD 190
P+KL ++A DGVAPRAKM + R RF R +EA+ ++ + ++ G LP +++
Sbjct: 135 PRKLLYIAFDGVAPRAKMKKMRSSRFIGSKIRRENREAQDKKRSEIEDSGRHLPPKRKE- 193
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
PG FM R + RY+V ++ D W+ + VILS TPGEGEHK
Sbjct: 194 ---TYPGKGFMFRQAEYFRYYVTERLNNDP---------GWQGIKVILSDANTPGEGEHK 241
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
IMDYIR ++ PDYNP+ HC++G D+ L THE F+++RE+ K N + +
Sbjct: 242 IMDYIRKQRANPDYNPSTHHCVHGADS------LATHEMNFTIIREQFKPNQRR---ACE 292
Query: 311 IVTPEETKFFLLH-LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFI 369
+ E+ + L + E E+ + + F + E +IDDWV + F +GNDF+
Sbjct: 293 LCYQEDHEMTDCQGLDAPPEERENEYLVNELLEGIHFHCNHERVIDDWVFLCFFVGNDFL 352
Query: 370 PNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
P+LP L+I GA+ +L ++Y++ L Y+ E G +NLK ++ +T L + E F++
Sbjct: 353 PHLPSLNIREGAIDILIRLYRKALHNTKDYLTENGVVNLKLVQQLMTDLGKEEDETFKKW 412
Query: 430 YAD-IQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYY 488
D ++ E K+ + ++E+D + + D + D + AN
Sbjct: 413 RVDELKNEETKIMPA-----NPADAEEVDTNDTVSLLLVDHQHGDARMPSRDNAN----- 462
Query: 489 YSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGC 548
+ D E T E G K YY +KL A ++ YI + W YYY GC
Sbjct: 463 KNPADAEEDTVRLWEEGWKKR-YYQHKLKVASSDHDFRAQFVRRYIEGLCWLFRYYYQGC 521
Query: 549 VSWSWYYPHHYAPY-----ISDIKDFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPE 602
SW WY+P+HYAP+ SD D L++ +E G +P P +Q + V ++ LPE
Sbjct: 522 ASWKWYFPYHYAPFASDFLASDFPDIDDLSINFEKGTKPLKPLEQQMIV--GFNRRYLPE 579
Query: 603 PYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDE 662
+ MT ++SPI+++YPE+F DLNG K + V L+PF+DE +L++ + V LT E
Sbjct: 580 TWSRKMTDDDSPIIDFYPEDFHIDLNGNKYPSQGVALLPFVDEDRLLRCLADVYPDLTPE 639
Query: 663 ERSRNRHGPMLVYT 676
E+ RN +GP ++
Sbjct: 640 EKKRNSNGPERLFV 653
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 28/169 (16%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP-----------EFDNLYLDMNGIIH 41
MGVP F ++ ++ P + ++ V +IP EFDNLYLDMN II
Sbjct: 42 MGVPGLFMWLRKKCPSMIVDCEEEKAKHVDGKRIPVNTTQRNPNGVEFDNLYLDMNEIIV 101
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C +P+ N P + + +I +IF I+ L +++P+KL ++A DGVAPRAKM + R R
Sbjct: 102 PCCYPS-NKPAPQ-NDDEIMCEIFLNIDRLVSIVRPRKLLYIAFDGVAPRAKMKKMRSSR 159
Query: 102 F------RSAKEAEVLEQ-KAKEKGERLPTEKRFDFITLKFCFPKKLFF 143
F R +EA+ ++ + ++ G LP +++ + F F + +F
Sbjct: 160 FIGSKIRRENREAQDKKRSEIEDSGRHLPPKRKETYPGKGFMFRQAEYF 208
>gi|340506425|gb|EGR32559.1| hypothetical protein IMG5_077960 [Ichthyophthirius multifiliis]
Length = 1187
Score = 285 bits (728), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 186/565 (32%), Positives = 314/565 (55%), Gaps = 39/565 (6%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKK+ ++ +DG APRAK NQQR RRF SAK + L K G L + +N I+ G
Sbjct: 81 PKKVLYLFLDGPAPRAKQNQQRTRRFLSAKSHKDLNNSLKNCG-ILAENQTMQNNAISTG 139
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM L+QQ+++++K K D WK++ V SG PGEGEHKI++++
Sbjct: 140 TTFMHELNQQIQFYIKNKFKQDP---------QWKNLEVFFSGSNVPGEGEHKIINFMHQ 190
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
S +Y+P+ HC+YG+DADLIMLGL TH Y S+LREE++ +K + + +
Sbjct: 191 YCSSDNYDPSTTHCIYGVDADLIMLGLSTHIKYVSILREEMRHIPNISKAAKREI--QIN 248
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
+F +++L+++R+YL+LE+ +L + + + + IENIIDD++L+ F IGNDFIP L +I
Sbjct: 249 QFQIIYLNIVREYLDLEYKQL-QGEMKNLKYDIENIIDDFLLICFFIGNDFIPRLYCFNI 307
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADI---- 433
G +L ++Y+ + Y+N GY+N K + + ++++++ E +K +
Sbjct: 308 REGQFEILIQIYKNYIKEAKEYLNNMGYINWKGMYELIKQISNYEKEFIGDKADECTKEY 367
Query: 434 -QYLEGKMGKKFSDVFHKEKSKEMDPDLA---ALIKATDDDYDDGTEEVLNYANYEEYYY 489
+ L+G+ G+ +V K KE + + + D+ D + V N E+ +
Sbjct: 368 NRQLKGQEGEDNFNVDDINKDKESNNNKQNENTFQQEYDNIIIDQQKNVFKEINKEKKFL 427
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYK--LDYAKVTN-EVLRDQAECYIRAIQWNLHYYYN 546
ED + N ++ Q +T YY K LD++ + +VL + YI +Q+ L YYY
Sbjct: 428 --EDIQILYNTEADGFQARTYYYKEKLQLDFSNSQHFKVLDNLITKYIEGLQFVLLYYYK 485
Query: 547 GCVSWSWYYPHHYAPYISDIKDFSHL-------NLKYEMGEPFLPFQQLLAVLPAASKEL 599
G SWSWYYP +YAP +DI + +K+++ +P+ P +QL+ ++ + L
Sbjct: 486 GVPSWSWYYPFYYAPMSADISLYIEYKQSILSQTIKFDLSQPYQPMKQLMCIIHPENASL 545
Query: 600 LPEPYQNLMTLE-NSPI---LEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
LP L+T + NSP+ ++YYPEE+ D G E +V++PF+++ + K +++
Sbjct: 546 LPPKIAQLLTDQTNSPLRNPIDYYPEEYRIDPYGGVFAHEYIVVLPFMEQELIEKVYNSI 605
Query: 656 --EHLLTDEERSRNRHGPMLVYTYS 678
+ ++ E+ RN G L ++Y+
Sbjct: 606 NWDSEISPEDIQRNLFGRNLKFSYN 630
Score = 100 bits (250), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 4/123 (3%)
Query: 1 MGVPKFFRYISERYPCL-SEVVREYQIPEFDNLYLDMNGIIHNCSHPNDN---DPHFRIT 56
MGVP F+ ++S RYP + +++ + +P D YLDMNG+I+ C+ D D +
Sbjct: 1 MGVPGFYSWLSRRYPLIVNQLNSKLDVPYIDCFYLDMNGLIYKCTKEEDTVFKDLLLQKN 60
Query: 57 EKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 116
++IF IF+YI+ + ++QPKK+ ++ +DG APRAK NQQR RRF SAK + L K
Sbjct: 61 MQEIFTLIFNYIDEMVNLVQPKKVLYLFLDGPAPRAKQNQQRTRRFLSAKSHKDLNNSLK 120
Query: 117 EKG 119
G
Sbjct: 121 NCG 123
>gi|115446147|ref|NP_001046853.1| Os02g0481900 [Oryza sativa Japonica Group]
gi|47848619|dbj|BAD22468.1| putative 5'-3' exoribonuclease [Oryza sativa Japonica Group]
gi|113536384|dbj|BAF08767.1| Os02g0481900 [Oryza sativa Japonica Group]
Length = 822
Score = 284 bits (726), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 208/686 (30%), Positives = 322/686 (46%), Gaps = 146/686 (21%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ----IPEFDNLYLDMNGIIHNCSHPNDNDPHFRIT 56
MG+P F+R++ RYP + +E + I +DNLYLDMN
Sbjct: 1 MGIPSFYRWLVNRYPSIVSPAKESRPADGIVVYDNLYLDMN------------------- 41
Query: 57 EKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 116
QI FH P+ D AP +EV E
Sbjct: 42 --QIIHYSFH----------PQDQMNAGTDVCAP--------------TTVSEVFESM-- 73
Query: 117 EKGERLPTEKRFDFI--TLKFCFPKKLFFMAIDGVAPRAKMN-QQRGRRFRSAKEAEVLE 173
FD++ + P++L ++A+DGVAP AKMN +RGRRF A E E ++
Sbjct: 74 -----------FDYLDRLFRIVRPRRLLYLAVDGVAPCAKMNGMRRGRRFAWASEEEEMQ 122
Query: 174 QKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKD 233
+ +E D N ITPGT FM ++ Q L Y+++ ++ + WK
Sbjct: 123 KI---------SEGVSDPNVITPGTEFMEKISQALTYYIRARLNSSDP--------GWKH 165
Query: 234 VCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSL 293
+ VILS PGEGEHKIM +IR +S Y+PN RHCL+G DADLIML L +HE +FS+
Sbjct: 166 IMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLFGHDADLIMLALASHEVHFSI 225
Query: 294 LREEVKFNTKSNKGGSQIVTPE-ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIEN 352
LRE+ SQ+ + E ++ L++ ++R+YLE+E K+ +P + P IE
Sbjct: 226 LRED----------NSQLTEADPEKQYLFLNIWVLREYLEIEL-KILDP--VCEP-DIER 271
Query: 353 IIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYI--------NEGG 404
+IDD++ + FL+GNDFIP++P L + AL LL +VY+ + GYI
Sbjct: 272 LIDDFIFICFLMGNDFIPHIPSLEMKEYALDLLIEVYKTTFNKMGGYIVNIEKVKDKHAA 331
Query: 405 YLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALI 464
YL + R E F +L+ ++ + F ++Y + + + K DV + E L
Sbjct: 332 YLEVSRLEIFFHQLSMYEEKIFLKRY---ELEQESLKKSCRDVLREASESER----LELS 384
Query: 465 KATDDDYDDGTEEVLNYANYEEYYYSDED---EEWRTNFFSEFGQHKTDYYHYKLDYAKV 521
+ +D + + EE Y W++ F+ E+ + ++ +
Sbjct: 385 RKLEDRFFN-----------EERPYDKLRLGLPGWKSRFYREY---------FGIETSNE 424
Query: 522 TNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEP 581
+ D A+ Y+ + W L YY SWSWYYP + AP++SD+K + + + +P
Sbjct: 425 IGNLQNDMAQKYLEGLCWMLQYYLADVPSWSWYYPFYVAPFVSDLKSNCRFEISFTVDKP 484
Query: 582 FLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIP 641
PF QL+AVLP S LPE Y+ +M + E+ + D GK+ W+
Sbjct: 485 LRPFDQLMAVLPLRSSCALPECYRKVMGRK-----EFDHPKLQADTIGKRFLWKC----- 534
Query: 642 FIDEVKLIKAMDAVEHLLTDEERSRN 667
I E +L++A ++ L+ E RN
Sbjct: 535 -ISEEELLQATKELDKELSMHEMRRN 559
>gi|295660622|ref|XP_002790867.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281119|gb|EEH36685.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1053
Score = 284 bits (726), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 249/492 (50%), Gaps = 122/492 (24%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP +S VV E ++P E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISSVVEELPQEIDGQEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P E+++ +IF Y + + M++P+KL +A+D V+ R
Sbjct: 61 PCTHPEGKPP--PSNEEEMMLEIFKYTDRVVNMVRPRKLLMIAVD-VSLRT--------- 108
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
ITL + + +GVAPRAKMNQQR R
Sbjct: 109 -----------------------------ITLLSHYDDSVISEG-NGVAPRAKMNQQRSR 138
Query: 162 RFRSAKEAEVLEQKA--------KEKGERLPTE-------KRFDSNCITPGTPFMCRLHQ 206
RFRSA+EA+ ++K K+ G++ E K +DSN ITPGTPFM L
Sbjct: 139 RFRSAQEAKEADEKKVEFAKLLRKQNGKKSCEEIVEEVIVKTWDSNVITPGTPFMDILAA 198
Query: 207 QLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNP 266
LRY+V K+ TD W+ + +I+S PGEGEHKIM++IR +S P++NP
Sbjct: 199 ALRYWVAYKLNTDP---------AWEKLKIIISDATVPGEGEHKIMEFIRSQRSCPEHNP 249
Query: 267 NMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN--------------------- 305
N RH +YGLDADLIMLGL THEP+F +LRE+V F
Sbjct: 250 NTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAK 309
Query: 306 --------KGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDW 357
KG + P F LH+S++R+YL +E ++P FPF +E +DDW
Sbjct: 310 EKNGEFDEKGKGSSLKP----FIWLHVSVLREYLAVEMHVPQQP----FPFDLERALDDW 361
Query: 358 VLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTK 417
V M F +GNDF+P+LP L I + L ++++ +P + GY+ + G+++L R + L
Sbjct: 362 VFMCFFVGNDFLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTKDGHVDLNRAQLILQG 421
Query: 418 LASFDFEQFREK 429
LA + FR +
Sbjct: 422 LAKQEDAIFRRR 433
Score = 171 bits (434), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 102/160 (63%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 603 YYEQKFQVHPKDIEFRHKVARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLG 662
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+N+++ G PF PF+QL+ VLPAAS +PE + +LM+ NS I+++YPEEF DLNGK
Sbjct: 663 KMNIEFNRGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPNSEIIDFYPEEFPIDLNGK 722
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V L+PFIDE +L+ AM+ HLL+ EE +RN G
Sbjct: 723 KFAWQGVALLPFIDEKRLLVAMEKRYHLLSSEEHARNSMG 762
>gi|299747213|ref|XP_001836883.2| 5'-3' exoribonuclease 2 [Coprinopsis cinerea okayama7#130]
gi|298407417|gb|EAU84500.2| 5'-3' exoribonuclease 2 [Coprinopsis cinerea okayama7#130]
Length = 1156
Score = 283 bits (725), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 177/469 (37%), Positives = 235/469 (50%), Gaps = 119/469 (25%)
Query: 2 GVPKFFRYISERYPCL-------------SEVVREYQIP-----------EFDNLYLDMN 37
GVP FR++S++YP + E +E IP EFDNLYLDMN
Sbjct: 18 GVPALFRWLSKKYPKIILPVEEEDDIKVPDENDQEVTIPVNMAQPNPNGVEFDNLYLDMN 77
Query: 38 GIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQ 97
GI P TE+ + ++F Y E + M++P+KL FMAIDGVAPRAKMNQQ
Sbjct: 78 GI----PAPE--------TEEDMMVEVFKYTERVVNMVRPRKLLFMAIDGVAPRAKMNQQ 125
Query: 98 RGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQ 157
R RRFRSA+EA+ E+ KE
Sbjct: 126 RSRRFRSAQEAKEKEEARKEA--------------------------------------- 146
Query: 158 QRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKIT 217
+ E K+ + T++ +DSN ITPGTPFM L LRY+V K+
Sbjct: 147 -----------LALWEAMGKKVSDEEKTKQAWDSNAITPGTPFMDLLAASLRYWVVQKMN 195
Query: 218 TDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDA 277
TD WK++ VI+S GEGEHKIMDYIR +S P Y+PN +H +YGLDA
Sbjct: 196 TDP---------GWKNIQVIISDASVAGEGEHKIMDYIRRQRSNPGYDPNTKHVIYGLDA 246
Query: 278 DLIMLGLCTHEPYFSLLREEVKFNTKS------NKGGSQIVTPEETK------------- 318
DLIML L THEP+F +LRE+V KS + G TK
Sbjct: 247 DLIMLALATHEPHFRVLREDVFAQDKSTACRICGQEGHYAAQCTGTKAEIEKKPPPPEKK 306
Query: 319 -FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F L ++++R+YLE+E P F F +E IDDWVL+ F +GNDF+P+LP L I
Sbjct: 307 PFIFLDVAVLREYLEVELDVPSSP----FRFDLEKAIDDWVLLIFFVGNDFLPHLPSLEI 362
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF 426
GA+ L K++++ LP + GY+++ G LNL R + L LA + E F
Sbjct: 363 REGAIDTLLKIWKQELPRMGGYLSDNGTLNLARAQIILEGLAKREDEIF 411
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 105/170 (61%)
Query: 507 HKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI 566
+K YY K E AE Y++ + W L YYY G SW WYYP+H+AP+ +D
Sbjct: 650 YKERYYKQKFGVEPHDIEFRHKVAEAYVQGLAWVLQYYYQGTPSWQWYYPYHFAPFAADF 709
Query: 567 KDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
D +++K+ +G+PF P++QL+ V PAAS++ +P +Q M E+SPI+++YP F D
Sbjct: 710 VDVEKMDIKFNLGQPFKPYEQLMGVFPAASRKHIPAVFQKFMVDEDSPIIDFYPPTFEID 769
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
+NGKK W+ V L+PFIDE +L+ AM LT++E RN+ G +++
Sbjct: 770 MNGKKMAWQGVALLPFIDETRLLDAMALEYPNLTEDEVKRNQPGHNVLFA 819
>gi|296084855|emb|CBI28264.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 283 bits (725), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 196/622 (31%), Positives = 303/622 (48%), Gaps = 125/622 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIP-----------EFDNLYLDMNGIIHNCSHPNDN 49
MGVP F+R++ +YP + VVR + EFDNLYLDMNGIIH C HP D
Sbjct: 1 MGVPSFYRWLVNKYPEI--VVRAVEDERESSSANPNGIEFDNLYLDMNGIIHPCFHPEDQ 58
Query: 50 --DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE 107
P T +++F +++ YI+ +F +++P+KL +MAIDGVAPRAKMNQQR RRF++AK+
Sbjct: 59 IFPP---TTFEEVFNNMYEYIDRIFSIVRPRKLLYMAIDGVAPRAKMNQQRRRRFQTAKD 115
Query: 108 AEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 167
E+ E + E+R ++ F M + P+ +
Sbjct: 116 NEIAEAE----------EQRL----------RRQFEMEGKPLVPK--------------Q 141
Query: 168 EAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
E++V D N ITPGT FM + + L+ ++ ++ +
Sbjct: 142 ESQVS-----------------DPNIITPGTVFMHEVSKALQQYICSRMKHEA------- 177
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
WKD+ VILS PGEGEHKIM +IR +S PDYNPN HCLYGLDADLIML L TH
Sbjct: 178 --GWKDLKVILSDSNVPGEGEHKIMSFIRLQRSLPDYNPNTLHCLYGLDADLIMLALATH 235
Query: 288 EPYFSLLREEVKFNTKSNKGGSQIVT----PEETKFFLLHLSLMRDYLELE-----FGKL 338
E +FS+LRE+V + S + T P+ + + L ++ L
Sbjct: 236 EVHFSILREDVLTLEQRGSCESAVETKTSPPKANSSLVKSRGWFKQVLTVDKTNSFIKNL 295
Query: 339 KEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPD-LHIINGALPLLYKVYQEVLPTLD 397
+ + P+ ++ W+L +L + I + P+ L IN Y+ Y + ++
Sbjct: 296 ESKSSIKMPYQFLHV---WILREYLELDMKISDPPEKLKEINFERIRCYECYMVDMERIE 352
Query: 398 GYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMD 457
+G ++ LKR EKF+ + +++ + F+++ A L + F+ +KEM
Sbjct: 353 E--KKGSFVKLKRVEKFILLVGTYEEKIFKKRMA----LRDSKLRWLLSTFY---TKEMK 403
Query: 458 PDLAALIKATDDDYDDGTEEV----LNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYH 513
L I+A D + G+ + L + ++E YY ++
Sbjct: 404 KRLKENIRAKSDLWRSGSLGIDRVRLGHPGWKERYYKEK--------------------- 442
Query: 514 YKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLN 573
D ++ ++ + Y + W L YY++G SW+W+YP+HY P+ SD K S +
Sbjct: 443 CSCDTSQGIESTRKELVQKYTEGLLWVLQYYFSGVPSWTWFYPYHYGPFASDFKGLSRVK 502
Query: 574 LKYEMGEPFLPFQQLLAVLPAA 595
K+E G PF PF QL+ VLP +
Sbjct: 503 GKFERGSPFKPFDQLMGVLPPS 524
>gi|213405427|ref|XP_002173485.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
gi|212001532|gb|EEB07192.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
Length = 963
Score = 283 bits (723), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 176/461 (38%), Positives = 242/461 (52%), Gaps = 100/461 (21%)
Query: 1 MGVPKFFRYISERY---------------PCLSEVVREYQIP----EFDNLYLDMNGIIH 41
MG+P FR +S +Y P +E + P E DNLYLDMNGI+H
Sbjct: 1 MGIPALFRLLSRKYTKVITPVIEVPSKVLPDGTEFGPDLAEPNPNGECDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
CSHP D P TE ++ +F Y + + M++P+ L +AIDGVAPRAKMNQQR RR
Sbjct: 61 PCSHPEDRPPP--ETEDEMMLAVFEYTDRILAMVRPRNLLMIAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA +E C
Sbjct: 119 FRSAREAAQKAAALEE------------------C------------------------- 135
Query: 162 RFRSAKEAEV-LEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
R AKE + +++ A +K K +DSNCITPGTPFM L + LRY++ K+ T+
Sbjct: 136 -VREAKEKGIPVDENAAKK-------KAWDSNCITPGTPFMDILAKALRYYITHKLNTEP 187
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
+K++ +LS PGEGEHKIM++IR + P+Y+PN RH +YGLDADLI
Sbjct: 188 ---------AFKNLRFLLSDASVPGEGEHKIMEFIRSQRVNPEYDPNTRHVIYGLDADLI 238
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNKGGSQ----IV----------TPEETKFFLLHLSL 326
MLGL THEP+F +LRE+V F S + + +V P + F L++ +
Sbjct: 239 MLGLATHEPHFRVLREDVFFQQGSTRRSKKEQLGLVPKIEATEAPKAPVKKPFIWLNVDI 298
Query: 327 MRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLY 386
+R+YLE+E L+ P L FPF +E IDDWV F +GNDF+P+LP L I +GAL L
Sbjct: 299 LREYLEIE---LQVPN-LPFPFDLERAIDDWVFFIFFVGNDFLPHLPSLDIRDGALERLT 354
Query: 387 KVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFR 427
+ ++ LP + GY+ G +NL R E L+ + + E FR
Sbjct: 355 EAWRLCLPHMGGYLTLDGSVNLSRAEVILSVIGDQEDEIFR 395
Score = 181 bits (460), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 135/232 (58%), Gaps = 10/232 (4%)
Query: 453 SKEMDPDLAALIKATDDDYDDG---------TEEVLNYANYEEYYYSDEDEEWRTNFFSE 503
S+ +PDL I T D D+G T +V + + E E T E
Sbjct: 528 SRSEEPDLTETIPPTPLDEDEGESTTPAGEETSDVATAGTKRKKPETPELIEGDTVRLWE 587
Query: 504 FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYI 563
G ++ YY K + + E +R+ Y++ + W L YYY GC SW+WYYP HYAP+
Sbjct: 588 PG-YRERYYTQKFHFEENNEEQIREAVYHYVKGLCWVLLYYYQGCPSWTWYYPFHYAPFA 646
Query: 564 SDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEF 623
+D K+ S L + +++ +PF P++QLL VLPAASKE LPE Q LMT +S I+++YPE F
Sbjct: 647 ADFKNLSSLKISFDLNQPFKPYEQLLGVLPAASKENLPEKLQKLMTDPDSEIIDFYPENF 706
Query: 624 ATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
DLNGKK +W+ V L+PFIDE +L+ A+ V LT+EE RN GP L++
Sbjct: 707 VIDLNGKKFEWQGVALLPFIDEKRLLDAVAKVYPELTEEESRRNTQGPPLLF 758
>gi|345562792|gb|EGX45805.1| hypothetical protein AOL_s00117g10 [Arthrobotrys oligospora ATCC
24927]
Length = 1102
Score = 282 bits (722), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 168/473 (35%), Positives = 245/473 (51%), Gaps = 110/473 (23%)
Query: 1 MGVPKFFRYISERYP--------CLSEVVREYQIP-----------EFDNLYLDMNGIIH 41
+ VP FFR++S++YP L + + ++IP E DNLYLDMNGI+H
Sbjct: 46 LSVPAFFRWLSQKYPKIISPVLEALPQEIDGHEIPVDTTGPNPNGEELDNLYLDMNGIVH 105
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
CSHP D P TE+++ ++F Y E + M++P+K+ MA+DGVAPRAKMNQQR RR
Sbjct: 106 PCSHPEDRPPP--ETEQEMMLEVFRYTERVVAMVRPRKVLMMAVDGVAPRAKMNQQRSRR 163
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSA+EA+ E++ E F+ L
Sbjct: 164 FRSAQEAKEKEEQVAE------------FVKL---------------------------- 183
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
A + ++ ++KG +DSN ITPGTPFM L L+Y+V K+ TD
Sbjct: 184 ---LASKGTDIDSNLQKKG--------WDSNAITPGTPFMDILSIALKYWVAHKLNTDP- 231
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W + +I+S PGEGEHKIM+++R +S P+++PN RH +YGLDADLIM
Sbjct: 232 --------GWAKLKIIISDSSVPGEGEHKIMEFVRGQRSHPEHDPNTRHVIYGLDADLIM 283
Query: 282 LGLCTHEPYFSLLREEV-----------KFNTKSNKGGSQIVTPEETK------------ 318
LGL THEP+F +LRE+V N K ++ E +
Sbjct: 284 LGLATHEPHFRVLREDVFAQDSKPRVCKICNQKGHRAEECTGKAREKEGEFDEKSKANPR 343
Query: 319 --FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F L + ++R+YL +E L PG LSF + +E IDDWV + F +GNDF+P+ P L
Sbjct: 344 KPFIWLDVGILREYLAVE---LHVPG-LSFQWDLERAIDDWVFLCFFVGNDFLPHFPSLE 399
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I + + L +++E L + G++ G +NL+R + L LA + FR++
Sbjct: 400 IRDAGIDTLTSIWRENLAAMKGFVTTDGNVNLERAQFILDGLAKQEDAIFRKR 452
Score = 169 bits (429), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 153/292 (52%), Gaps = 24/292 (8%)
Query: 507 HKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI 566
++ YY K R+ A Y+ + W L YY+ GC SW+WYYP+HYAP+ D
Sbjct: 610 YRDRYYEQKFGRPPSDTNFRREVANAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAQDF 669
Query: 567 KDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
++ L + + +G+PF PF+QL+ VLPAASK +P+ + LMT ENS I+++YPE+F D
Sbjct: 670 ENIGELKINFTLGKPFKPFEQLMGVLPAASKHNIPKAFWPLMTEENSEIIDFYPEDFPID 729
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTAL 686
LNGKK W+ V ++PFIDE +L+ AM+ + + EE+ RN G L+ + L L
Sbjct: 730 LNGKKFAWQGVAILPFIDETRLLDAMNKIYPQIPAEEKERNEMGNELLLFSESHPLYDEL 789
Query: 687 APDYFP--AINENHAVEKPLYRDDIYVHPNKLRKGLCQDVN-LKLYVTHFPTLKHVQFTH 743
A +F A++ +H ++ L L G+ +D N + FP FT
Sbjct: 790 ACQFFSKRAVDGDHELDPRLSE--------GLSGGVRKDPNFIPRSTVSFP------FT- 834
Query: 744 KIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIE 795
N K ++ ++S+ ++ +P K + +L + + + P L E
Sbjct: 835 ---NVKSDIYGDIEDDQSMSVI---YLLPEKKNLHKSMLLRGVVLKTPALTE 880
>gi|326471133|gb|EGD95142.1| 5'-3' exoribonuclease [Trichophyton tonsurans CBS 112818]
Length = 1066
Score = 282 bits (722), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 173/480 (36%), Positives = 247/480 (51%), Gaps = 108/480 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ--------IP-----------EFDNLYLDMNGIIH 41
MGVP FR++S +YP + V E Q IP E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP P E ++ +IF Y + + M++P+K+ +A
Sbjct: 61 PCTHPEGKPP--PANEGEMMLEIFKYTDRVVNMVRPRKVLMIA----------------- 101
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFC--FPKKLFFMAIDGVAPRAKMNQQR 159
V+ + + PT T FC F + F +DGVAPRAKMNQQR
Sbjct: 102 --------VVAKGSYSLSFSFPTG------TYSFCDMFGTNVGFF-LDGVAPRAKMNQQR 146
Query: 160 GRRFRSAKEAEVLEQKAKEKGERLPTEKR---------------FDSNCITPGTPFMCRL 204
RRFRSA++A+ ++K E + L +KR +D+N ITPGTPFM L
Sbjct: 147 SRRFRSAQDAKAEDEKKVEFAKLLKKQKRGKKDVTVAEEVITKTWDTNVITPGTPFMDIL 206
Query: 205 HQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDY 264
LRY+V K++TD W+ + VI+S PGEGEHKIM++IR ++ P+Y
Sbjct: 207 ALALRYWVAYKLSTDP---------GWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEY 257
Query: 265 NPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFN---TKSNKGGSQIVTPEET---- 317
+PN RH +YGLDADLIMLGL THEP+F +LRE+V F ++ K Q EE
Sbjct: 258 DPNTRHVIYGLDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGK 317
Query: 318 ------------------KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVL 359
F LH+S++R+YL +E ++P FPF++E +DDWV
Sbjct: 318 AKEKRGEFDEKQKGNPLKPFIWLHVSVLREYLAVEMQVPQQP----FPFNLERALDDWVF 373
Query: 360 MGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
M F +GNDF+P+LP L I + L ++++ +P + GY+ + G ++L + + L LA
Sbjct: 374 MCFFVGNDFLPHLPSLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLA 433
Score = 173 bits (438), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 102/141 (72%)
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D +++++ G PF PF+QL+
Sbjct: 637 ARAYVEGLSWVLLYYFQGCPSWTWYYPYHYAPFAADFVDIGEMDVQFTKGTPFKPFEQLM 696
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
VLPAAS +PE +++LM+ ENS I+++YPE+F DLNGKK W+ V L+PFIDE +L+
Sbjct: 697 GVLPAASNHAIPEVFRDLMSDENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLL 756
Query: 650 KAMDAVEHLLTDEERSRNRHG 670
AMD HLL++EE++RN G
Sbjct: 757 AAMDKRYHLLSEEEQARNAMG 777
>gi|159115185|ref|XP_001707816.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
gi|157435923|gb|EDO80142.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
Length = 902
Score = 282 bits (721), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 228/784 (29%), Positives = 339/784 (43%), Gaps = 217/784 (27%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPE----------------FDNLYLDMNGIIHNCS 44
MGVP FFR+I +RY + + V E +P+ DNLY D NG+IH C
Sbjct: 1 MGVPSFFRWIVQRYGSVIDNVIE-ALPDTYEANIDGGALPLGFAIDNLYFDTNGLIHPCF 59
Query: 45 HPNDN-DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFR 103
HP P TE ++F++ F ID V
Sbjct: 60 HPEGRPQPE---TEAEVFEE-----------------IFQVIDRV--------------- 84
Query: 104 SAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRF 163
+ C P++L ++A+DG APRAK+NQQR RRF
Sbjct: 85 -----------------------------VSICRPRRLLYLAVDGPAPRAKLNQQRSRRF 115
Query: 164 RSAKEAEVLEQKAKEK-------GERLP----------------TEKRFDSNCITPGTPF 200
+A E ++ +Q+A+E+ G+ P TE DSN ITPGTPF
Sbjct: 116 MAAYERQI-KQRAQERRLMNMNLGDAEPSLKKLSFEEGNAMDTSTENVLDSNAITPGTPF 174
Query: 201 MCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKS 260
M RL L+Y+V + KLW+ + V+ + +PGEGEHKIM ++R +S
Sbjct: 175 MSRLSVALKYYVANRQANSKLWRH---------LTVLYADAWSPGEGEHKIMSFVRIQRS 225
Query: 261 KPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK--------------------- 299
+P Y+P HC+YGLDADLIML L THEP F +LR+ V
Sbjct: 226 QPGYDPCTVHCIYGLDADLIMLALGTHEPNFLILRDVVDTDNLKRTCTRCGHLRVSSEYR 285
Query: 300 ------FNTK-SNKGG---------SQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGV 343
F T+ ++GG S + F LH+S +R+YL+ EF
Sbjct: 286 TGTVDPFTTRHEDQGGIDCPFYPGSSLRPVAFRSPFQFLHVSRLREYLQREFDAAD---- 341
Query: 344 LSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLD-GYINE 402
E IDD+V + FL+GNDF+P++ L I A+ + Y+++ + G++
Sbjct: 342 ----VIFERAIDDFVFLTFLVGNDFLPHIQCLDIREDAVIRMIYFYKQLKRSRKIGFLTT 397
Query: 403 GGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDP---- 458
G +N++ FL +LA + FR + + GK+ + S + +K+ P
Sbjct: 398 GSDVNMEDLHIFLKELAEQEARIFRARAS------GKLNARHSQISEAPDTKDETPGERA 451
Query: 459 ----------DLAALIKATDDDYDDGTEE------------VLNYA----NYEEYYYSDE 492
D +IK DDY + ++ ++ Y Y + YY
Sbjct: 452 IREYFQFFKRDDKRMIKDAIDDYCNLHDKPLPPTVVAVKHILIKYELEKPGYAQRYYLG- 510
Query: 493 DEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAEC--YIRAIQWNLHYYYNGCV- 549
+F + + +K + K R Q C YI + W YY+ V
Sbjct: 511 -----IGLMDDFPETNQESDTFKAELRK------RIQTMCYHYIDGLIWVFRYYFLPKVE 559
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYE-----MGEPFLPFQQLLAVLPAASKELLPEPY 604
W WYYP+H++P ++D+ S + PF P++QLLAV+P AS LLP
Sbjct: 560 DWGWYYPYHHSPLLADLASASQTYTRTWKQHTVSNRPFNPYEQLLAVMPPASAALLPPVM 619
Query: 605 QNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEER 664
+ LMT S + ++YP DL+ K W+ V+L+PFI+ +LI A LT E+
Sbjct: 620 RCLMTDPASILNKFYPSLIKCDLSEKTALWKGVLLLPFINSSELISAAQKSYDQLTPLEQ 679
Query: 665 SRNR 668
RNR
Sbjct: 680 QRNR 683
>gi|293333211|ref|NP_001170327.1| uncharacterized protein LOC100384297 [Zea mays]
gi|224035107|gb|ACN36629.1| unknown [Zea mays]
gi|413932823|gb|AFW67374.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 490
Score = 281 bits (719), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 202/594 (34%), Positives = 284/594 (47%), Gaps = 145/594 (24%)
Query: 1 MGVPKFFRYISERYPC-LSEVVREYQ--------IP-----------EFDNLYLDMNGII 40
MGVP F+R++++RYP +S+ E +P EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP T ++F+ IF YI+ LF +I+P+KL +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCFHPEGRPAP--TTYDEVFKSIFDYIDHLFGLIRPRKLLYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AK+A + + + E R
Sbjct: 119 RFRAAKDAADAAAEEERLRKEFEAEGR--------------------------------- 145
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
L QK K + DSN ITPGT FM L L+Y+++L++
Sbjct: 146 ----------TLAQKEKSEA--------IDSNVITPGTEFMFVLSTALQYYIQLRLN--- 184
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
TL W+ V +ILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLI
Sbjct: 185 ---HTLG---WQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNK---------------GGSQ----IVTP--EETKF 319
ML L THE +FS+LRE + + K G SQ + P + K+
Sbjct: 239 MLALATHEVHFSILREVISMPGQHEKCFLCGQVGHLAAECRGPSQPDNSVELPPIHKKKY 298
Query: 320 FLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN 379
L++ ++R+YL + + P F + E +IDD+V M F +GNDF+P++P L I
Sbjct: 299 QFLNIWVLREYLAKDLEIIDAP----FKINFERLIDDFVFMCFFVGNDFLPHMPTLEIRE 354
Query: 380 GALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGK 439
GA+ LL +Y+ ++ GY+ + G + L R E F+ +A + EQ +K A IQ + +
Sbjct: 355 GAINLLMSIYRSEFTSMGGYLTDVGEVILDRVEHFIQSVAVNE-EQIFQKRARIQ--QAR 411
Query: 440 MGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTN 499
+ +E S+E D Y D + L Y E YY+D+
Sbjct: 412 ENNEEKHKMQRENSEE-------------DQYVDKVK--LGEPGYRERYYADK------- 449
Query: 500 FFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSW 553
F E + +K +V RD + Y+ + W + YYY G SW W
Sbjct: 450 -FKEEAE------------SKPIVQVRRDVVQKYVEGLCWVMRYYYQGVCSWQW 490
>gi|19115067|ref|NP_594155.1| 5'-3' exoribonuclease Dhp1 [Schizosaccharomyces pombe 972h-]
gi|729332|sp|P40848.1|XRN2_SCHPO RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein dhp1
gi|496393|dbj|BAA04601.1| Dhp1 protein [Schizosaccharomyces pombe]
gi|1177359|emb|CAA93235.1| 5'-3' exoribonuclease Dhp1 [Schizosaccharomyces pombe]
Length = 991
Score = 280 bits (716), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 177/462 (38%), Positives = 247/462 (53%), Gaps = 101/462 (21%)
Query: 1 MGVPKFFRYIS---------------ERYPCLSEVVREYQIP-----EFDNLYLDMNGII 40
MGVP FR +S E+ P +E+ + +P E DNLYLDMNGI+
Sbjct: 1 MGVPALFRLLSRKFAKVITPVIEAPTEKLPDGTEIEPDLSLPNPNGVECDNLYLDMNGIV 60
Query: 41 HNCSHPNDN-DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
H CSHP D P TE ++ +F Y + + M++P++L F+AIDGVAPRAKMNQQR
Sbjct: 61 HPCSHPEDRPAPE---TEDEMMVAVFEYTDRILAMVRPRQLLFIAIDGVAPRAKMNQQRS 117
Query: 100 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQR 159
RRFRS++EA + E++ + FI
Sbjct: 118 RRFRSSREAALKEEELQA------------FI---------------------------- 137
Query: 160 GRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTD 219
E +Q+ E +K +DSNCITPGTPFM L + LRY++ K+ +D
Sbjct: 138 ----------EEAKQQGIPIDENATKKKSWDSNCITPGTPFMDTLAKSLRYYIINKLNSD 187
Query: 220 KLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADL 279
W++V ILS PGEGEHKIM++IR + KP+Y+PN H +YGLDADL
Sbjct: 188 P---------CWRNVRFILSDASVPGEGEHKIMEFIRSQRVKPEYDPNTHHVVYGLDADL 238
Query: 280 IMLGLCTHEPYFSLLREEVKFNTKSNK-------GGSQIVTPEETK-------FFLLHLS 325
IMLGL THEP+F +LRE+V F S K G ++ ET F L++S
Sbjct: 239 IMLGLATHEPHFRVLREDVFFQQGSTKKTKEERLGIKRLDDVSETNKVPVKKPFIWLNVS 298
Query: 326 LMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLL 385
++R+YLE+E L P L FPF +E IDDWV F +GNDF+P+LP L I +GA+ L
Sbjct: 299 ILREYLEVE---LYVPN-LPFPFDLERAIDDWVFFIFFVGNDFLPHLPSLDIRDGAVERL 354
Query: 386 YKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFR 427
++++ LP + GY+ G +NL R E L+ + + + + F+
Sbjct: 355 TEIWRASLPHMGGYLTLDGSVNLARAEVILSAVGNQEDDIFK 396
Score = 182 bits (462), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 122/186 (65%), Gaps = 1/186 (0%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCV 549
++E+E T E G ++ YY K + E +R+ + Y+ + W L YYY GC
Sbjct: 575 TEENENTDTVRLYEPG-YRERYYEQKFHISPDEPEKIREAVKHYVHGLCWVLLYYYQGCP 633
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMT 609
SW+WYYP+HYAP+ +D KD + +++K+E+ +PF P++QLL VLPAASK LPE Q LMT
Sbjct: 634 SWTWYYPYHYAPFAADFKDLASIDVKFELNQPFKPYEQLLGVLPAASKNNLPEKLQTLMT 693
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
ENS I+++YPE F DLNGKK +W+ V L+PFIDE +L+ A+ + LT+EE RN
Sbjct: 694 DENSEIIDFYPENFTIDLNGKKFEWQGVALLPFIDENRLLNAVSKIYPQLTEEESKRNED 753
Query: 670 GPMLVY 675
G L++
Sbjct: 754 GSTLLF 759
>gi|308160579|gb|EFO63060.1| 5'-3' exoribonuclease 2 [Giardia lamblia P15]
Length = 900
Score = 280 bits (716), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 228/771 (29%), Positives = 336/771 (43%), Gaps = 193/771 (25%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPE----------------FDNLYLDMNGIIHNCS 44
MGVP FFR+I +RY + + V E +P+ DNLY D NG+IH C
Sbjct: 1 MGVPSFFRWIVQRYSSVIDNVIE-ALPDTYEANIDGGALPLGFAIDNLYFDTNGLIHPCF 59
Query: 45 HPNDN-DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFR 103
HP P TE ++F++I F ID V
Sbjct: 60 HPEGRPQPE---TEAEVFEEI-----------------FQVIDRV--------------- 84
Query: 104 SAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRF 163
+ C P++L ++A+DG APRAK+NQQR RRF
Sbjct: 85 -----------------------------VSVCRPRRLLYLAVDGPAPRAKLNQQRSRRF 115
Query: 164 RSAKEAEVLEQKAKEK-----GERLP----------------TEKRFDSNCITPGTPFMC 202
+A E ++ +Q+A+E+ G+ P TE DSN ITPGTPFM
Sbjct: 116 MAAYERQI-KQRAQERRHMNLGDTEPSLKKLGFEENKAMDTFTENALDSNAITPGTPFMS 174
Query: 203 RLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKP 262
RL L+Y+V + KLW+ + V+ + +PGEGEHKIM ++R +S+P
Sbjct: 175 RLSVALKYYVANRQANSKLWRH---------LTVLYADAWSPGEGEHKIMSFVRIQRSQP 225
Query: 263 DYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK----------------------- 299
Y+P HC+YGLDADLIML L THEP F +LR+ V
Sbjct: 226 GYDPCTVHCIYGLDADLIMLALGTHEPNFLILRDVVDTDNLKRTCTRCGHLRVSSEYRTG 285
Query: 300 ----FNTK-SNKGG---------SQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLS 345
F T+ ++GG S + F LH+S +R+YL+ EF
Sbjct: 286 TVDPFTTRHEDQGGIDCPFYPGSSLRPVAFRSPFQFLHVSRLREYLQREFDAAD------ 339
Query: 346 FPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLD-GYINEGG 404
E IDD+V + FL+GNDF+P++ L I A+ + Y+++ + G++ G
Sbjct: 340 --VVFERSIDDFVFLTFLVGNDFLPHIQCLDIREDAVIRMIYFYKQLKRSKKIGFLTTGS 397
Query: 405 YLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDP------ 458
+N+ F L +LA + F+ + + GK+ + S V S++ P
Sbjct: 398 DVNMNDFHILLKELAEQESRIFKARAS------GKLNTRHSQVSETPNSRDETPGERAIR 451
Query: 459 --------DLAALIKATDDDY----DDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQ 506
D +IK DDY D + + Y E + ++ G
Sbjct: 452 EYFQFFKRDDKRMIKDAMDDYCTLHDKPLPPTVVAVKHILIKYELEKPGYAQRYYLGIGL 511
Query: 507 HKTDYYHYKLDYAKVTNEVL-RDQAEC--YIRAIQWNLHYYYNGCV-SWSWYYPHHYAPY 562
D+ + E+ R Q C YI + W YY+ V W WYYP+H++P
Sbjct: 512 MD-DFQETDQESDIFKTELRKRIQTMCYHYIDGLIWVFRYYFLPKVEDWGWYYPYHHSPL 570
Query: 563 ISDIKDFSHLNLK----YEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILE 617
+ D+ S + + M PF P++QLLAV+P AS LLP + LMT S + +
Sbjct: 571 LVDLASASQTYTRTWKQHTMSNRPFNPYEQLLAVMPPASATLLPPVMRCLMTDPASILNK 630
Query: 618 YYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
+YP DL+ K W+ V+L+PFI+ +L+ A LT E+ RNR
Sbjct: 631 FYPSLIKCDLSEKTALWKGVLLLPFINSSELVSAAQKSYGQLTPLEQQRNR 681
>gi|385303464|gb|EIF47537.1| 5 -3 exoribonuclease 2 [Dekkera bruxellensis AWRI1499]
Length = 1025
Score = 279 bits (713), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 166/454 (36%), Positives = 231/454 (50%), Gaps = 97/454 (21%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQI-----------------PEFDNLYLDMNGIIHN 42
MGVP FR++S +YP +S V+ + + E DNLYLDMNGI+H
Sbjct: 1 MGVPSLFRWLSRKYPKIISPVIEDDPVIVGGIEQPLDYSAXNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP +N P +E ++ +F Y + M +P+KL +A+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHP-ENKPAPE-SEDEMMLAVFEYTNRVLNMARPRKLLMIAVDGVAPRAKMNQQRSRRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
RSA++AE I KM + GR
Sbjct: 119 RSARDAE------------------------------------ISNEERERKMEEMEGR- 141
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
EV+++ + K K +DSN ITPGTPFM L + LR++V K+ D
Sbjct: 142 ------GEVIDESIRHK-------KTWDSNAITPGTPFMDILAESLRFWVAYKLANDP-- 186
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
W + VI+S PGEGEHKIM++IR +S P+YNPN HC+YGLDADLI L
Sbjct: 187 -------GWSKLQVIISDSSVPGEGEHKIMNFIRSQRSDPEYNPNTTHCIYGLDADLIFL 239
Query: 283 GLCTHEPYFSLLREEV--------------KFNTKSNKGGSQIVTPEETKFFLLHLSLMR 328
L THEP+F +LRE+V +F + ++ F LH+ ++R
Sbjct: 240 SLATHEPHFRVLREDVYAKDQLQRKLRNMDQFGIDQQTRNQIELIDKKKPFIWLHIGILR 299
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
+YL +E + LSF F +E IDDWV M F GNDF+P+LP L + + ++ L +
Sbjct: 300 EYLAVELSIPR----LSFKFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRDSSIDTLVSI 355
Query: 389 YQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFD 422
++ ++P L GYI G L+L E L +L +
Sbjct: 356 WKRIMPRLKGYITCDGQLDLAGVEALLEELGRME 389
Score = 156 bits (395), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 103/153 (67%), Gaps = 2/153 (1%)
Query: 524 EVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFL 583
++ R+ + Y+ I W L YYY GC SW+WYYP HYAP+ D K+ + +++ +E G PF
Sbjct: 574 QICRNMVKGYVEGISWVLLYYYQGCPSWNWYYPFHYAPFALDFKNLTDIDVTFERGXPFK 633
Query: 584 PFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFI 643
F+QL++VLPAASK LP+ + LM E+S I+++YP+EF D+NG K W+ + L+PFI
Sbjct: 634 XFEQLMSVLPAASKHNLPDVFGPLMCDEDSEIIDFYPKEFQVDMNGAKMSWQGISLLPFI 693
Query: 644 DEVKLIKAMDAVEHLLTDEERSRN--RHGPMLV 674
DE +L+KA+ + LT EE RN +H +L+
Sbjct: 694 DEKRLLKAVRSKYGSLTPEEVERNTLKHEILLI 726
>gi|157876822|ref|XP_001686753.1| putative exoribonuclease 2 [Leishmania major strain Friedlin]
gi|68129828|emb|CAJ09134.1| putative exoribonuclease 2 [Leishmania major strain Friedlin]
Length = 895
Score = 278 bits (711), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 195/716 (27%), Positives = 323/716 (45%), Gaps = 126/716 (17%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY--------QIPE-------FDNLYLDMNGIIHNCS 44
MG+ FF ++ Y C+ + ++ +P +DN Y+DMNG+IH C
Sbjct: 1 MGIAGFFLWLQRWYGDCIDNIPQDVVDAAFKGQALPHSHASAYSYDNFYVDMNGLIHPCC 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
H P E+ + +F +++L R+++PKK + +DGVAPR+KMNQQR RRFR+
Sbjct: 61 HDTAPLPEPENEEEMFER-MFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQQRSRRFRA 119
Query: 105 AKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFR 164
A E LE A + D I ++ P+ PR +
Sbjct: 120 ADER--LESDA-------ISNACADSIVSEYHLPR-----------PRVR---------- 149
Query: 165 SAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKD 224
+R+D N ITP T FM R+ L +++ K+ D
Sbjct: 150 ----------------------ERWDHNVITPSTAFMERVALALEWYIMKKLNEDA---- 183
Query: 225 TLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGL 284
W+ + V+ S PGEGEHKIM YIR ++S+P Y+ N H ++G+DADLI LGL
Sbjct: 184 -----AWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTSHVIHGMDADLICLGL 238
Query: 285 CTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVL 344
THE + +LR ++ ++ P+ +F +LS R+ L +F ++
Sbjct: 239 STHEKHVCILRNQL----------TETFQPDHNRFCYFNLSTYREKLMQDFANIE----- 283
Query: 345 SFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGG 404
E ++DD++ + F +GNDF+P++P + I + +L Y L GY+ + G
Sbjct: 284 --GMQFERVVDDFIFLCFFVGNDFLPHVPLVSIKTRGIEMLLDHYVRDF-ALHGYLTQLG 340
Query: 405 YLNLKRFEKFLTKLASFDFEQFREKYADI--------QYLEGKMGKKFSDVFHKEKSKEM 456
++ FL S + ++Y + Q++E ++ K + V E +
Sbjct: 341 EVDYAHLHIFLMNFTSKCMMKLTKEYYGVVRAKERAKQHVEERVTKTEAQV--SEVLGTL 398
Query: 457 DPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKL 516
PD ++ + D +++ A E + + + ++ + ++ YY +K
Sbjct: 399 LPD-----RSNAQEVSDALLGLMSSARKERTRFVVDKQPLGFSYLDK--TYRDAYYQHKF 451
Query: 517 DYAKVTNEV-----LRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSH 571
+ TN +R Y+R +QW + YY GC SW WY+P+HYAP + D+ F+
Sbjct: 452 GWDPSTNRAAFESQIRLCCAEYLRGMQWVMRYYTKGCPSWEWYFPYHYAPLLQDLAAFTA 511
Query: 572 -LNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+N++ M P P +QLLAVLP S LPE + S + ++YP D +
Sbjct: 512 TVNVEMRMSAPLHPVEQLLAVLPRLSVHALPEELHEAVNDPKSVLGKFYPAIVDVDFSEA 571
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTAL 686
++ V+ IPFI+ L KA + L D G +Y + + +L L
Sbjct: 572 NFSYQGVLRIPFINCEALSKACRQLVELEED-------FGSTFLYCHESTSLAKQL 620
>gi|145506154|ref|XP_001439043.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406216|emb|CAK71646.1| unnamed protein product [Paramecium tetraurelia]
Length = 1199
Score = 278 bits (710), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 288/1154 (24%), Positives = 528/1154 (45%), Gaps = 152/1154 (13%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKR---FDSNCI 194
P+ + ++ DGVAPRAK NQQR RRF S+K + K K+ ++L E++ F +N I
Sbjct: 79 PQLVIYLTFDGVAPRAKANQQRQRRFASSKG----DAKIKQLLKQLDLEQQNHTFKNNQI 134
Query: 195 TPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDY 254
T GT FM L++Q+++F+ K D+ + ++ VI SG + PGEGEHKI+++
Sbjct: 135 TAGTEFMYELNEQVKFFINRKFKEDE---------KYANLQVIFSGSDVPGEGEHKILEF 185
Query: 255 IRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIV-- 312
+R +K++ ++NP+ HC+Y DADLIMLGL H Y S++RE+ + ++ +QI
Sbjct: 186 MRGIKNQQNFNPDWTHCIYSADADLIMLGLGIHLKYVSIIREQ----SNMDQIKTQIACK 241
Query: 313 -TPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPN 371
+ E KF L++L ++++YL+LE+ ++ + P++I+ +IDD++L+ FLIGNDF+P
Sbjct: 242 RSIETVKFELINLQIVKEYLDLEYKTIQ----MKIPYNIDRVIDDFLLLFFLIGNDFLPR 297
Query: 372 LPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYA 431
+ I G + LL ++ L D Y+ + G++N K + L+ F+ + ++
Sbjct: 298 VYCFDIKQGTVELLIDTFKSFLEQCDEYVTQDGWINWKSMSLLVQVLSKFEIKAIEKRVE 357
Query: 432 DIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSD 491
+++ K K + +++ + + +L L A + + + V YE D
Sbjct: 358 ELK----KQIKDTDNPEYQDYKIQWESELKIL-DALNIQFSNNNSVVARKLFYESKCQID 412
Query: 492 EDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSW 551
D +E G+ + D K Y+ Q+ L YYY+G SW
Sbjct: 413 ID--------TEEGKKELDKIILK-----------------YLEGFQFVLSYYYHGVPSW 447
Query: 552 SWYYPHHYAPYISDIKDFSHLN----LKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNL 607
WYY ++Y+P D+ + N +++ +P+ PFQQLL +LP + LLP P++ L
Sbjct: 448 EWYYSYYYSPMCFDLCVYLSKNQIEKIQFGQSKPYDPFQQLLLILPPHNANLLPAPFRGL 507
Query: 608 MTLENSPI---LEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEH-LLTDEE 663
LE SP+ +YYP+E+ D G + + + +PF++ LI ++ L + E
Sbjct: 508 YDLE-SPLRKPFDYYPDEYEIDPFGAIWEHQFICKVPFMNSDLLISEYKKIDQSQLNELE 566
Query: 664 RSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQD 723
R R++ G ++ + + G ++ P I +N + + +H + ++ L +
Sbjct: 567 RERSKFGHAYLFVQTKIK-GDSIQSK-LPKIFKNKKYRTEQIQLNGNIHQDA-QEVLSRI 623
Query: 724 VNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPS--------LK 775
N K+ P L + KI ++ + +N+ ++ KV++ S ++
Sbjct: 624 KNQKVKQNELPILPSLHVL-KINKTWLQNKKDKHKNQRVL----KVELASKNLDFLDKIE 678
Query: 776 QVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKS 835
+DQ + YP V V +K S + + ++ D K
Sbjct: 679 SASDQTQTFDCYCGYPQNYYGEVALVVSKKSFLFLKNYQLKNMQILSEFRDDILDEVKND 738
Query: 836 ITDGYYTKLGVDIGNTEVLVYGQPVESRKYFF-----GPRGKVTQQRTFIRSTVTYAYQS 890
I D + + N + + + YF+ P + +R V
Sbjct: 739 IYDHLKYTMQTRLENQGIFLESINAIAVVYFYKEIIRNPDRTLGYNMLNVREEVM---PL 795
Query: 891 AVLNLQQARESLEYKTIDEIFYPGCQCFALSNPH---YGSGGCVISTVKEENSFIKLSFK 947
++ Q+ E ++Y+ ++I + ++N GS GCV + ++ +K+ +
Sbjct: 796 EWISDQKIVELVDYRLENQIDLINQKVIVVNNDKNQICGSIGCVEKKINQDQYIVKILRQ 855
Query: 948 VQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGS--IFIID---STEEGA 1002
+ D + + V + V+ KL+I P ++ G IFI D T+
Sbjct: 856 PILQTDNNKI------KVQKFFDIGFVSEKLNIPPEIIHYILGCIKIFIGDKKKQTDIIV 909
Query: 1003 KRHNIGLNIKFSRKNEEVVGFTRRDETT------------KKWFYTEQVVTLIKNYMKQF 1050
++ +IG N KN+ V R +E +K +E +VT ++ Y K+
Sbjct: 910 QQIDIGFNAVHKGKNQLVPELLRINEAQFDSEGYEKFKQFEKAQLSETLVTDLEEYAKRL 969
Query: 1051 PEVFGFLKDHSSD-----------DIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRP 1099
PE+ FLK + DI+ +DDV G + + +WL P ++ +
Sbjct: 970 PELIKFLKSVGKEKLRSLQQIKITDIF-KDDV--QAGINTILKHYTWLLMLPTSQYTLCN 1026
Query: 1100 CGAAVVDAKVVSLIEHAVDTCEKVEKQITLF------VKPNKLYIPKPTLDKLCPDPDTK 1153
++ ++ + +E + + +KV++ TLF + K Y+P L +
Sbjct: 1027 VASSTYSSQTIKALEESKQS-QKVQR--TLFTHKFWLLNQEKFYVP-----PLMTEHPKI 1078
Query: 1154 FKLFDRVVNIRDCYTVPLGYRGTIIGIV-QGETSYDAMYDVVFDKPFPHGVKI--RCSES 1210
KL DRVV + + YT G G ++G++ GE M +V++DKP + RCS
Sbjct: 1079 HKLGDRVVALNNNYT-NFGAYGVVVGVIDNGEI----MIEVLWDKPRFGQTDLGGRCSPL 1133
Query: 1211 RGYRMPAQAMINLS 1224
RG + + N++
Sbjct: 1134 RGSLVRFLDIFNIT 1147
Score = 85.1 bits (209), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 4/120 (3%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP F+ ++S+RYP ++ + D LYLDMN +I+ C+ N + EK I
Sbjct: 1 MGVPNFYSWLSKRYPMCKYPFTKHHGHQIDFLYLDMNQVIYKCA-TNQTILKDYMIEKSI 59
Query: 61 ---FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 117
+ I +YI+ + ++ P+ + ++ DGVAPRAK NQQR RRF S+K ++Q K+
Sbjct: 60 ESLWTSILNYIDTIINLVDPQLVIYLTFDGVAPRAKANQQRQRRFASSKGDAKIKQLLKQ 119
>gi|401420072|ref|XP_003874525.1| putative exoribonuclease 2 [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490761|emb|CBZ26025.1| putative exoribonuclease 2 [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 893
Score = 275 bits (704), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 189/710 (26%), Positives = 322/710 (45%), Gaps = 114/710 (16%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY--------QIPE-------FDNLYLDMNGIIHNCS 44
MG+ FF ++ Y C+ + ++ +P +DN Y+DMNG+IH C
Sbjct: 1 MGIAGFFLWLQRWYGDCIDNIPQDVVDAAFKGQALPHSHASAYSYDNFYVDMNGLIHPCC 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
H P E+ + +F +++L R+++PKK + +DGVAPR+KMNQQR RRFR+
Sbjct: 61 HDTAPLPEPENEEEMFER-MFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQQRSRRFRA 119
Query: 105 AKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFR 164
A E + + +R+ +E + P+ PR +
Sbjct: 120 ADERLESDAISNACADRIVSE---------YHLPR-----------PRVR---------- 149
Query: 165 SAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKD 224
+R+D N ITP T FM R+ L +++ K+ D
Sbjct: 150 ----------------------ERWDHNVITPSTAFMERVALALEWYIMKKLNEDA---- 183
Query: 225 TLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGL 284
W+ + V+ S PGEGEHKIM YIR ++S+P Y+ N H ++G+DADLI LGL
Sbjct: 184 -----GWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTSHVIHGMDADLICLGL 238
Query: 285 CTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVL 344
THE + +LR ++ ++ P+ +F +LS R+ L +F ++
Sbjct: 239 STHEKHVCILRNQL----------TETFQPDHNRFCYFNLSTYREKLMQDFANIE----- 283
Query: 345 SFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGG 404
E ++DD++ + F +GNDF+P++P + I + +L Y L GY+ + G
Sbjct: 284 --GMQFERVVDDFIFLCFFVGNDFLPHVPLVSIKTRGIEMLLDHYVRDF-ALHGYLTQLG 340
Query: 405 YLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALI 464
++ FL S + ++Y + + + + + K ++ ++ LA L+
Sbjct: 341 EVDYAHLHIFLMNFTSKCMVKLTKEYYGVVRAKERAKQHVEERVTKTEA-QVSEVLATLL 399
Query: 465 --KATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVT 522
++ + D +++ A E + + ++ + ++ YY +K + T
Sbjct: 400 PDRSNAQEVSDALLGLMSSARKERTRLVVDKQPLGFSYLDK--TYRDAYYQHKFGWDPST 457
Query: 523 NEV-----LRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSH-LNLKY 576
N +R Y+R +QW + YY GC SW WY+P+HYAP + D+ F+ +N++
Sbjct: 458 NRAAFERQIRLCCAEYLRGMQWVMRYYTKGCPSWEWYFPYHYAPLLQDLAAFTATVNVEM 517
Query: 577 EMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEA 636
M P P +QLLAVLP S LPE + S + ++YP D + ++
Sbjct: 518 RMSAPLHPVEQLLAVLPRLSVHALPEELHEAVNDPKSVLGKFYPAIVNVDFSEANFSYQG 577
Query: 637 VVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTAL 686
V+ IPFI+ L KA + L D G +Y + + +L L
Sbjct: 578 VLRIPFINCEALSKACRQLVELEED-------FGSTFLYCHESTSLAKQL 620
>gi|171690192|ref|XP_001910021.1| hypothetical protein [Podospora anserina S mat+]
gi|170945044|emb|CAP71155.1| unnamed protein product [Podospora anserina S mat+]
Length = 1078
Score = 275 bits (704), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 247/489 (50%), Gaps = 119/489 (24%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIP-------------------EFDNLYLDMNGII 40
MG+P FR++S +YP +S V+ + I EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDTPITMDDGAVIPVDTTKPNPNGEEFDNLYLDMNGIV 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H CSHP D P + E+++ +IF Y + + M++P+KL +A+ P ++ QR +
Sbjct: 61 HPCSHPEDR-PAPK-DEEEMMVEIFKYTDRVVNMVRPRKLLMIAVGMSNP--SLDYQRQK 116
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RS DGVAPRAKMNQQR
Sbjct: 117 LTRS------------------------------------------DGVAPRAKMNQQRS 134
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKR---------------FDSNCITPGTPFMCRLH 205
RRFR+A++A+ E+ ++ + L +K+ FDSN ITPGTPFM L
Sbjct: 135 RRFRAARDAKEKEEDKEKLLKMLQKDKKSTVQVQPVEEVVQKAFDSNSITPGTPFMDILA 194
Query: 206 QQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYN 265
LRY+ K+ TD W + VI+S PGEGEHKIM+Y+R ++ P ++
Sbjct: 195 ASLRYWCSYKLNTDP---------AWAKIKVIISDATIPGEGEHKIMEYVRSQRNSPGHD 245
Query: 266 PNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV-----------------------KFNT 302
PN RH +YGLDADLIMLGL THEP+F +LRE+V +
Sbjct: 246 PNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFAQDARPRLCKLCGQKGHDAANCRGEA 305
Query: 303 KSNKG--GSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
K +G G + F LH+++ R+YL +E L PG L F F +E IDDWV M
Sbjct: 306 KEKEGEFGEKDRAAPLKPFIWLHVNIFREYLAVE---LNVPG-LPFAFDLERAIDDWVFM 361
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F +GNDF+P+LP L I + L ++++ LP++ GY+ + G+++L+R + + LA
Sbjct: 362 CFFVGNDFLPHLPALEIRENGIDTLVAIWKDNLPSMGGYLTKDGHVDLERAQLIMAGLAK 421
Query: 421 FDFEQFREK 429
+ FR +
Sbjct: 422 QEDAIFRRR 430
Score = 162 bits (410), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 103/160 (64%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y+ + W L YY+ GC SW W+YP+HYAP+ +D D
Sbjct: 609 YYEQKFKVDPKDIEFRHKVARAYVEGLAWVLMYYFQGCPSWEWFYPYHYAPFAADFVDLG 668
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ + ++ G PF+QL++VLPAAS+ +PE + +LMT E+S I+++YPEEF DLNGK
Sbjct: 669 KMTINFDKGRISRPFEQLMSVLPAASRHAIPEVFHDLMTNEDSEIIDFYPEEFDIDLNGK 728
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ + L+PFI+ +L+KAM+ + LL++E+R+RN G
Sbjct: 729 KMSWQGIALLPFIEMPRLLKAMEPKQKLLSEEDRARNEPG 768
>gi|398024282|ref|XP_003865302.1| exoribonuclease 2, putative [Leishmania donovani]
gi|322503539|emb|CBZ38625.1| exoribonuclease 2, putative [Leishmania donovani]
Length = 879
Score = 275 bits (702), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 194/716 (27%), Positives = 321/716 (44%), Gaps = 126/716 (17%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY--------QIPE-------FDNLYLDMNGIIHNCS 44
MG+ FF ++ Y C+ + ++ +P +DN Y+DMNG+IH C
Sbjct: 1 MGIAGFFLWLQRWYGDCIDNIPQDVVDAAFKGQTLPHSHASAYSYDNFYVDMNGLIHPCC 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
H P E+ + +F +++L R+++PKK + +DGVAPR+KMNQQR RRFR+
Sbjct: 61 HDTAPLPEPENEEEMFER-MFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQQRSRRFRA 119
Query: 105 AKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFR 164
A E LE A + D I ++ P+ PR +
Sbjct: 120 ADER--LESDAI-------SNACADRIVSEYHLPR-----------PRVR---------- 149
Query: 165 SAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKD 224
+R+D N ITP T FM R+ L +++ K+ D
Sbjct: 150 ----------------------ERWDHNVITPSTAFMERVALALEWYIMKKLNEDA---- 183
Query: 225 TLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGL 284
W+ + V+ S PGEGEHKIM YIR ++S+P Y+ N H ++G+DADLI LGL
Sbjct: 184 -----AWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTSHVIHGMDADLICLGL 238
Query: 285 CTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVL 344
THE + +LR ++ ++ P+ +F +LS R+ L +F ++
Sbjct: 239 STHEKHVCILRNQL----------TETFQPDHNRFCYFNLSTYREKLMQDFSNIE----- 283
Query: 345 SFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGG 404
E ++DD++ + F +GNDF+P++P + I + +L Y L GY+ + G
Sbjct: 284 --GMQFERVVDDFIFLCFFVGNDFLPHVPLVSIKTRGIEMLLDHYVRDF-ALHGYLTQLG 340
Query: 405 YLNLKRFEKFLTKLASFDFEQFREKYADI--------QYLEGKMGKKFSDVFHKEKSKEM 456
++ FL S + ++Y + Q++E ++ K + V E +
Sbjct: 341 EVDYAHLHIFLMNFTSKCMMKLTKEYYGVVRAKERAKQHVEERVTKTEAQV--SEVLGTL 398
Query: 457 DPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKL 516
PD ++ + D +++ A E + + ++ + ++ YY +K
Sbjct: 399 LPD-----RSNAQEVSDALLALMSSARKERTRLVVDKQPLGFSYLDK--AYRDAYYQHKF 451
Query: 517 DYAKVTNEV-----LRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSH 571
+ N +R Y+R +QW + YY GC SW WY+P+HYAP + D+ F+
Sbjct: 452 GWDPSANRAAFESHIRLCCAEYLRGLQWVMRYYTKGCPSWEWYFPYHYAPLLQDLAAFTA 511
Query: 572 -LNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+N++ M P P +QLLAVLP S LPE + S + ++YP D +
Sbjct: 512 TVNVEMRMSAPLHPVEQLLAVLPRLSVHALPEELHEAVNDPKSVLGKFYPAIVDVDFSEA 571
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTAL 686
++ V+ IPFI+ L KA + L D G +Y + + +L L
Sbjct: 572 NFSYQGVLRIPFINCEALSKACRQLVELEED-------FGSTFLYCHESTSLAKQL 620
>gi|146104232|ref|XP_001469769.1| putative exoribonuclease 2 [Leishmania infantum JPCM5]
gi|134074139|emb|CAM72881.1| putative exoribonuclease 2 [Leishmania infantum JPCM5]
Length = 879
Score = 275 bits (702), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 194/716 (27%), Positives = 321/716 (44%), Gaps = 126/716 (17%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY--------QIPE-------FDNLYLDMNGIIHNCS 44
MG+ FF ++ Y C+ + ++ +P +DN Y+DMNG+IH C
Sbjct: 1 MGIAGFFLWLQRWYGDCIDNIPQDVVDAAFKGQTLPHSHASAYSYDNFYVDMNGLIHPCC 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
H P E+ + +F +++L R+++PKK + +DGVAPR+KMNQQR RRFR+
Sbjct: 61 HDTAPLPEPENEEEMFER-MFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQQRSRRFRA 119
Query: 105 AKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFR 164
A E LE A + D I ++ P+ PR +
Sbjct: 120 ADER--LESDAI-------SNACADRIVSEYHLPR-----------PRVR---------- 149
Query: 165 SAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKD 224
+R+D N ITP T FM R+ L +++ K+ D
Sbjct: 150 ----------------------ERWDHNVITPSTAFMERVALALEWYIMKKLNEDA---- 183
Query: 225 TLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGL 284
W+ + V+ S PGEGEHKIM YIR ++S+P Y+ N H ++G+DADLI LGL
Sbjct: 184 -----AWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTSHVIHGMDADLICLGL 238
Query: 285 CTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVL 344
THE + +LR ++ ++ P+ +F +LS R+ L +F ++
Sbjct: 239 STHEKHVCILRNQL----------TETFQPDHNRFCYFNLSTYREKLMQDFSNIE----- 283
Query: 345 SFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGG 404
E ++DD++ + F +GNDF+P++P + I + +L Y L GY+ + G
Sbjct: 284 --GMQFERVVDDFIFLCFFVGNDFLPHVPLVSIKTRGIEMLLDHYVRDF-ALHGYLTQLG 340
Query: 405 YLNLKRFEKFLTKLASFDFEQFREKYADI--------QYLEGKMGKKFSDVFHKEKSKEM 456
++ FL S + ++Y + Q++E ++ K + V E +
Sbjct: 341 EVDYAHLHIFLMNFTSKCMMKLTKEYYGVVRAKERAKQHVEERVTKTEAQV--SEVLGTL 398
Query: 457 DPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKL 516
PD ++ + D +++ A E + + ++ + ++ YY +K
Sbjct: 399 LPD-----RSNAQEVSDALLALMSSARKERTRLVVDKQPLGFSYLDK--AYRDAYYQHKF 451
Query: 517 DYAKVTNEV-----LRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSH 571
+ N +R Y+R +QW + YY GC SW WY+P+HYAP + D+ F+
Sbjct: 452 GWDPSANRAAFESHIRLCCAEYLRGLQWVMRYYTKGCPSWEWYFPYHYAPLLQDLAAFTA 511
Query: 572 -LNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+N++ M P P +QLLAVLP S LPE + S + ++YP D +
Sbjct: 512 TVNVEMRMSAPLHPVEQLLAVLPRLSVHALPEELHEAVNDPKSVLGKFYPAIVDVDFSEA 571
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTAL 686
++ V+ IPFI+ L KA + L D G +Y + + +L L
Sbjct: 572 NFSYQGVLRIPFINCEALSKACRQLVELEED-------FGSTFLYCHESTSLAKQL 620
>gi|154345762|ref|XP_001568818.1| putative exoribonuclease 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066160|emb|CAM43950.1| putative exoribonuclease 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 899
Score = 274 bits (701), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 197/720 (27%), Positives = 327/720 (45%), Gaps = 134/720 (18%)
Query: 1 MGVPKFFRYISERY-PCLSEVVREY--------QIPE-------FDNLYLDMNGIIHNCS 44
MG+ FF ++ Y C+ V ++ +P +DN Y+DMNG+IH C
Sbjct: 1 MGIAGFFLWLQRWYGDCVDNVPQDVVDAAFKGQALPRSHASAYSYDNFYVDMNGLIHPCC 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
H P E+ + +F +++L R+++PKK + IDGVAPR+KMNQQR RRFR+
Sbjct: 61 HDTAPLPEPENEEEMFER-MFDQLDLLVRVVRPKKCLVLCIDGVAPRSKMNQQRSRRFRA 119
Query: 105 AKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFR 164
A E + + +R+ +E + P+ PR +
Sbjct: 120 ADERLESDAISNACADRIVSE---------YSLPR-----------PRVR---------- 149
Query: 165 SAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKD 224
+R+D N ITP T FM R+ L +++ K+ D
Sbjct: 150 ----------------------ERWDHNVITPSTAFMERVALALEWYIMKKLNEDA---- 183
Query: 225 TLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGL 284
W+ + V+ S PGEGEHKIM YIR ++S+P Y+ N H ++G+DADLI LGL
Sbjct: 184 -----EWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTTHVIHGMDADLICLGL 238
Query: 285 CTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVL 344
THE + +LR ++ ++ P+ +F +L + R L +F ++
Sbjct: 239 STHEKHVCILRNQL----------TETFQPDHNRFCYFNLQMYRMKLMKDFANIE----- 283
Query: 345 SFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGG 404
E ++DD++ + F +GNDF+P++P + I + LL Y L GY+ G
Sbjct: 284 --GMQFERVVDDFIFLCFFVGNDFLPHVPLVSIKTRGIELLLDHYVRDF-ALHGYLTHLG 340
Query: 405 YLNLKRFEKFLTKLASFDFEQFREKYADI--------QYLEGKMGK---KFSDVF----- 448
++ FL AS + ++Y I Q++E ++ K + S+V
Sbjct: 341 EVDYAHLHIFLMNFASKCMIKLTKEYYGIVRARERAKQHVEERITKTEAQVSEVLGTLLP 400
Query: 449 HKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSE-FGQH 507
+ ++E+ L L+ + E + + +S D+ +R ++ + FG
Sbjct: 401 DRSNAQEVSDVLLGLMSSVR------KERTRLVVDKQPLGFSYLDKMYRDAYYQQKFG-- 452
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
+ + ++ A N++ AE Y+R +QW + YY GC SW WY+P+HYAP + D+
Sbjct: 453 ----WDHSINRAAFENQIRLCCAE-YLRGMQWVMRYYTKGCPSWEWYFPYHYAPLLQDLA 507
Query: 568 DFSH-LNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
F+ +N++ M P P +QLLAVLP S LPE + S + ++YP+ D
Sbjct: 508 AFTATVNVEMRMSAPLHPVEQLLAVLPRLSVHALPEELHEAVNDPKSLLGKFYPDMVDVD 567
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTAL 686
+ ++ V+ IPFI+ L +A + L D G +Y + + L L
Sbjct: 568 FSEANFSYQGVLRIPFINCEALSRACRKLVELEED-------FGSTFLYCHESTLLAKQL 620
>gi|407409729|gb|EKF32447.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi marinkellei]
Length = 807
Score = 273 bits (699), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 200/689 (29%), Positives = 309/689 (44%), Gaps = 117/689 (16%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY---------------QIPEFDNLYLDMNGIIHNCS 44
MG+ F+ ++ Y C+ +V E FDN YLDMNG+IH C
Sbjct: 1 MGIAGFYLWLQRWYGDCVEDVPEEVVKAALNGQPLPVSSDATQRFDNFYLDMNGLIHPCC 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
H P E+ + IF +++L+++++P+K + IDGVAP++KMNQQR RRFR+
Sbjct: 61 HDTAPLPEPETEEEMFER-IFAQVDLLYKIVRPRKCLVLCIDGVAPQSKMNQQRSRRFRA 119
Query: 105 AKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFR 164
A+E + +GE + D + G+ P Q R R
Sbjct: 120 AEE--------RIEGEVFSAQCAEDVVK--------------KGLPP----PQTRSR--- 150
Query: 165 SAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKD 224
+D N ITP TPFM R+ + +F+ KI D
Sbjct: 151 ------------------------WDHNVITPSTPFMERVGLAIEWFIMKKINEDP---- 182
Query: 225 TLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGL 284
W+ + VI S PGEGEHKIM YIR ++ + YNP H ++G+DADLI LGL
Sbjct: 183 -----AWRHIAVIFSDAHVPGEGEHKIMHYIRELRVQLGYNPQTSHVIHGMDADLICLGL 237
Query: 285 CTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVL 344
THE + ++LR ++ ++ P+ +F L R L +FG + G +
Sbjct: 238 STHEEHVTILRNQL----------TETFQPDHNRFCYFSLYKYRLRLRDDFGGI---GQM 284
Query: 345 SFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGG 404
F E ++DD+V + F +GNDF+P++P + I + LL Y Y+ GG
Sbjct: 285 DF----ERVLDDFVFLCFFVGNDFLPHVPLISIKTKGIELLLDHYVRGFKD-HSYLTHGG 339
Query: 405 YLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALI 464
+N KFL E+ +++Y + + + K +E+ KE++ +L +
Sbjct: 340 EVNYGNLTKFLRFFVVGYMEKLKQEYGGVLRAKQRAKAKV-----EERVKELEQELEEQL 394
Query: 465 KATDDDYDDGTEEVLNYANYEEYYYSDEDEEWR-------TNFFSEFGQHKTDYYHYKLD 517
+ D + + V N A+ + S E R F H+ YY K
Sbjct: 395 NSLQKDRKNA-QHVSNAAH--KLLLSIMKERARLVVDKEPLGFSYVNDDHRDKYYEKKFG 451
Query: 518 YAKVTNEVLRDQAEC----YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF-SHL 572
+ E + + Y+R QW + YY GC SW WYYP +YAP + D+ F +
Sbjct: 452 WDPADREAFEKKIQLCCAEYLRGTQWVMRYYTTGCPSWDWYYPFYYAPLLQDLAHFPGKV 511
Query: 573 NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQ 632
N+K +G P P QLLAVLP S E LPE + + +S + +YPE+ D +
Sbjct: 512 NVKMTLGAPRHPVLQLLAVLPRLSVEALPEELHDAVKDPDSVLGVFYPEKVDVDFSEAHF 571
Query: 633 DWEAVVLIPFIDEVKLIKAMDAVEHLLTD 661
++ V+ +PF++ L A + L D
Sbjct: 572 SYQGVLRLPFVNNSHLQSACQKLVRLEPD 600
>gi|356553393|ref|XP_003545041.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 1075
Score = 272 bits (696), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 173/474 (36%), Positives = 240/474 (50%), Gaps = 113/474 (23%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + V+ QIP E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVIVDAIEEEPVVIDGVQIPVDTSKKNPNNIEYDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D E +F+ +F YI+ LF M++P++L +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPSPTSFDE--VFECMFDYIDRLFIMVRPRELLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FR+AK+A + E ++ GR
Sbjct: 119 FRAAKDAADAAAEEARLREEF----------------------------------EKEGR 144
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ S E++ FDSN ITPGT FM L L+Y+V L++ D
Sbjct: 145 KLPSKGESQT-----------------FDSNVITPGTEFMAVLSIALQYYVHLRLNNDP- 186
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+++ VILS PGEGEHKIM YIR ++ Y+PN RHCLYGLDADLIM
Sbjct: 187 --------GWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLYGLDADLIM 238
Query: 282 LGLCTHEPYFSLLRE-----------------------EVKFNTKS---NKGGSQIVTPE 315
L L THE +FS+LRE E K K+ ++ G IVT
Sbjct: 239 LALATHEIHFSILREIVFTPGQDKCFLCGQMGHMAANCEGKAKRKAGEFDEKGEAIVT-- 296
Query: 316 ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
+ F L++ +R+YLE E P + F + I+DD++ M F +GNDF+P++P L
Sbjct: 297 KKPFQFLNIWTLREYLEYEMRISNPPSEIDF----DCIVDDFIFMCFFVGNDFLPHMPTL 352
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I GA+ LL VY++ GY+ G +NL R E F+ + S++ + F+++
Sbjct: 353 EIREGAINLLIAVYKKEFREFGGYLTNGSTINLSRVEHFIQAVGSYEDKIFQKR 406
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 114/191 (59%), Gaps = 9/191 (4%)
Query: 477 EVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRA 536
+V N N EE + W+ ++ E KT + + +D Y
Sbjct: 531 DVFNSKNAEEDKIKLGEPGWKERYYEEKFSAKT---------PEELEAIRKDVVLKYTEG 581
Query: 537 IQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAAS 596
+ W +HYYY G SW+W+YP+HYAP+ SD+K L++ +++G PF PF QLL V PAAS
Sbjct: 582 LCWVMHYYYEGVCSWNWFYPYHYAPFASDLKGLGELDISFKLGTPFKPFDQLLGVFPAAS 641
Query: 597 KELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVE 656
LPEPY+ LMT NSPI+++YP +F D+NGK+ W+ + +PFIDEV+L+ + +E
Sbjct: 642 SHALPEPYRRLMTDPNSPIIDFYPIDFEVDMNGKRFAWQGIAKLPFIDEVRLLAEVQKIE 701
Query: 657 HLLTDEERSRN 667
+LLT +E+ RN
Sbjct: 702 NLLTPDEKRRN 712
>gi|342184282|emb|CCC93763.1| putative 5'-3' exoribonuclease 2 [Trypanosoma congolense IL3000]
Length = 785
Score = 272 bits (695), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 174/553 (31%), Positives = 264/553 (47%), Gaps = 59/553 (10%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE--------AEVLEQKAKEKGER 182
+ K P+K M +DGVAP++KMNQQR RRFR+A+E AE L + K+
Sbjct: 85 LVFKIVRPRKCLVMCVDGVAPQSKMNQQRSRRFRAAEESVESGRLSAECLAELRKKGLPE 144
Query: 183 LPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHE 242
R+D N ITP TPFM RL + +F+ K+ D W + V+ S
Sbjct: 145 PDIRPRWDHNVITPATPFMERLGLAVEWFILKKLNEDP---------AWGKIVVVFSDAH 195
Query: 243 TPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV--KF 300
GEGEHKIM YIR ++ +P Y+PN H +YG+DADLI LGL THE ++LR ++ F
Sbjct: 196 VAGEGEHKIMQYIRGLRVQPGYDPNTSHVIYGMDADLICLGLITHERNVTILRNQLTDSF 255
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
N F H++ R+ L F L ++E IIDD+V +
Sbjct: 256 QAAHN------------AFCYFHIAEYRECLRKSFLALSG-------MNLERIIDDFVFL 296
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
F +GNDF+P++P + + L +L Y E L Y+ G +N FL + +
Sbjct: 297 CFFVGNDFLPHIPLISLKAKGLEMLLNHYVEELCN-TSYLTNKGEVNFAVLPGFLERFVA 355
Query: 421 FDFEQFREKYADIQYLEGKMGKKFSDVFH------KEKSKEMDPDLAALIKATDDDY--- 471
Q + +YA + + + + + K ++ PD + K ++ Y
Sbjct: 356 NYMNQLKREYAIMWGMRSRAKCRVKESLEQCNAGVKAALGDLKPDRSNAQKISNVVYGLL 415
Query: 472 -DDGTEEVLNYANYEEYYYSDEDEEWRTNFF-SEFGQHKTDYYHYKLDYAKVTNEVLRDQ 529
E E +S DE +R ++ ++FG ++ ++ A+ E
Sbjct: 416 LSAAKERARFVGGKEPLGFSYSDENFRDKYYETKFGWDPSNRRKFEKKIARCCAE----- 470
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSH-LNLKYEMGEPFLPFQQL 588
Y R QW + YY GC SW W+YP++YAP + D+ FS +N++ +G P P QL
Sbjct: 471 ---YYRGTQWVMRYYTVGCPSWEWFYPYYYAPLLEDLAAFSGTVNVEMHLGVPRHPVVQL 527
Query: 589 LAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKL 648
LAVLP S + LPEP N + +S + E+YP+ D + ++ V+ +PFID KL
Sbjct: 528 LAVLPRLSVKGLPEPLHNAVLDPDSVLGEFYPDTIDVDHSEANFSYQGVLKLPFIDSEKL 587
Query: 649 IKAMDAVEHLLTD 661
A + L+ D
Sbjct: 588 QAACQTLVELVPD 600
Score = 97.4 bits (241), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 77/124 (62%), Gaps = 17/124 (13%)
Query: 1 MGVPKFFRYISERYP-CL--------SEVVREYQIPE-------FDNLYLDMNGIIHNCS 44
MG+ F+ ++ Y C+ S+ +R PE FDNLYLDMNG++H C
Sbjct: 1 MGIAGFYLWLKRWYATCIENIPMDVVSDAMRGIGHPEDGAKGPGFDNLYLDMNGLVHPCC 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
H P +E+++F+ IF ++++F++++P+K M +DGVAP++KMNQQR RRFR+
Sbjct: 61 HDTAPLPE-PASEEEMFERIFAQVDLVFKIVRPRKCLVMCVDGVAPQSKMNQQRSRRFRA 119
Query: 105 AKEA 108
A+E+
Sbjct: 120 AEES 123
>gi|195338777|ref|XP_002036000.1| GM16241 [Drosophila sechellia]
gi|194129880|gb|EDW51923.1| GM16241 [Drosophila sechellia]
Length = 464
Score = 272 bits (695), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/478 (36%), Positives = 240/478 (50%), Gaps = 119/478 (24%)
Query: 1 MGVPKFFRYISERYPCL---------------SEVVREYQIP-----EFDNLYLDMNGII 40
MGVP FFR++S +YP + + + +P EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKQVDADTGRNIYEDATLPNPNGIEFDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C+HP D P + E ++ IF I+ LF +++P+KL +MAIDGVAPRAKMNQQR R
Sbjct: 61 HPCTHPEDK-PAPK-NEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+AKE TEKR
Sbjct: 119 RFRAAKET---------------TEKRL-------------------------------- 131
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKI 216
E + ++ +G +LP EK FDSNCITPGTPFM RL + L YFV ++
Sbjct: 132 -------EVARIREELLSRGCKLPPEKEKGDHFDSNCITPGTPFMDRLSKCLHYFVHDRL 184
Query: 217 TTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLD 276
+ WK + VILS PGEGEHKIMDYIR +++PD++PN +H L G D
Sbjct: 185 NNNP---------AWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGAD 235
Query: 277 ADLIMLGLCTHEPYFSLLREEV------------KFNTKSNKG-GSQIVTP--------- 314
ADLIMLGL THEP F+++REE F + +K G P
Sbjct: 236 ADLIMLGLATHEPNFTIIREEFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPDV 295
Query: 315 ---EETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPN 371
E KF + LS++R+YL+ L+ P L F +S E +DDWV M F +GNDF+P+
Sbjct: 296 PIGAEVKFIFVRLSVLREYLK---QTLEMPN-LPFEYSFERALDDWVFMCFFVGNDFLPH 351
Query: 372 LPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
LP L I G + L ++Y++ + G + G R + +T L + + + F+ +
Sbjct: 352 LPSLEIREGTVDRLVELYKKCV-YRQGLSHRLGRCKSDRVQLIMTDLGNAEDQIFKSR 408
>gi|50550657|ref|XP_502801.1| YALI0D13750p [Yarrowia lipolytica]
gi|74634562|sp|Q6C961.3|XRN2_YARLI RecName: Full=5'-3' exoribonuclease 2
gi|49648669|emb|CAG80989.1| YALI0D13750p [Yarrowia lipolytica CLIB122]
Length = 1010
Score = 272 bits (695), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 161/439 (36%), Positives = 231/439 (52%), Gaps = 73/439 (16%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE--------------YQIP----EFDNLYLDMNGIIH 41
MGVP +R++S++ P +S+V+ + Y P E DNLYLDMNGI+H
Sbjct: 1 MGVPGLYRHLSQKCPKIVSDVIEDETTIVDGEEIPGSDYSAPNPNGELDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP + +E ++ +F Y E + + +P+K+ MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEGEEAP--PSEDEMLLAVFKYTERVLNVCRPRKVLMMAIDGVAPRAKMNQQRARR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FRSAK+A + E L +E + I L Q G
Sbjct: 119 FRSAKDAAI------EAESTLESELKAKTIEL-----------------------QSSGE 149
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ K E + + K+ P ++DSN ITPGTPFM +L LRY+V K+ T+
Sbjct: 150 K---GKSLETILDEFKQGLVNKPG--KWDSNAITPGTPFMEKLAAALRYWVGYKLNTEP- 203
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+D+ V++S PGEGEHKIM++IR + P YN N HC+YGLDADLI
Sbjct: 204 --------GWRDLKVVISDATVPGEGEHKIMEFIRSQRGDPTYNANTSHCIYGLDADLIF 255
Query: 282 LGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEP 341
LGL THEP F LLRE+V + NK P F L++ ++R+YL + + P
Sbjct: 256 LGLATHEPKFKLLREDV---FRQNKTAGHQKKP----FIWLNIDILREYLREDL-RFTHP 307
Query: 342 GVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYIN 401
PF +E IDDWV + F +GNDF+P+LP + +G++ +L ++ + YI
Sbjct: 308 QT-KIPFDLERAIDDWVFLCFFVGNDFLPHLPACDVRDGSINVLVNQWKNGMTRWKDYIT 366
Query: 402 EGGYLNLKRFEKFLTKLAS 420
G++NL + + L A+
Sbjct: 367 CDGHVNLAQAQDLLKNFAT 385
Score = 160 bits (404), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 128/220 (58%), Gaps = 21/220 (9%)
Query: 453 SKEMDPDLAALIKATDDDYDD---GTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKT 509
S E P A A D D + E YA++ +++ S E + N F
Sbjct: 506 SSEATPPTANPSIANDADLSNPNVTVHETTGYADHVQFHKSGYTERYYMNKF-------- 557
Query: 510 DYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF 569
H K D +V N + R AE Y++ + W L YYY+GC SWSW+YP+HYAP D
Sbjct: 558 ---HAKED--EVDN-LRRQVAEEYMKGVCWVLMYYYHGCQSWSWFYPYHYAPLAGDFDQI 611
Query: 570 SHLNLKYEMGE--PFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDL 627
S N+K E GE PF P++QL++VLPAAS LP ++ LM+ ENSPI++YYPE F DL
Sbjct: 612 S--NMKVEFGESAPFRPYEQLMSVLPAASGHNLPAVFRPLMSEENSPIIDYYPENFQLDL 669
Query: 628 NGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
NGKKQ+W+AVVL+PFI+ L++ + A LT EE+ RN
Sbjct: 670 NGKKQEWKAVVLLPFINADHLLEHVQAKYTELTPEEKDRN 709
>gi|242218321|ref|XP_002474952.1| predicted protein [Postia placenta Mad-698-R]
gi|220725867|gb|EED79836.1| predicted protein [Postia placenta Mad-698-R]
Length = 253
Score = 272 bits (695), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/299 (48%), Positives = 186/299 (62%), Gaps = 70/299 (23%)
Query: 12 ERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEIL 71
ERYP S++++E +IPEFDNLY+D NGIIHNCSHPND D HFR++E+Q+F IF Y++ L
Sbjct: 24 ERYPLTSQLIQENKIPEFDNLYVDFNGIIHNCSHPNDGDAHFRLSEEQMFTSIFAYVDHL 83
Query: 72 FRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFI 131
F I+PKKLFFMAIDGVAPRAKMNQQR RRFR+AKEA + +KA++KGE+LP +K FD
Sbjct: 84 FGKIKPKKLFFMAIDGVAPRAKMNQQRSRRFRTAKEAREIREKAEQKGEKLPDQKAFD-- 141
Query: 132 TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDS 191
C FM AK+++Q R F + K +E DS
Sbjct: 142 --SNCITPGTEFM--------AKLSEQL-RYFINKKISE-------------------DS 171
Query: 192 NCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKI 251
N W+D + V+LSGH+ PGEGEHK+
Sbjct: 172 N-----------------------------WRD---------ITVVLSGHDVPGEGEHKV 193
Query: 252 MDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
M+YIR +++PDY+PN+RHCLYGLDADLIMLGL +H+P+F LLREEVKF S G++
Sbjct: 194 MEYIRLSRAQPDYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVKFGPASKSKGNK 252
>gi|378727060|gb|EHY53519.1| 5'-3' exoribonculease Dhp1 [Exophiala dermatitidis NIH/UT8656]
Length = 1075
Score = 271 bits (693), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 174/476 (36%), Positives = 242/476 (50%), Gaps = 111/476 (23%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE--YQIP----------------EFDNLYLDMNGIIH 41
MGVP FR+++++YP +S VV E Y+I E NLYLD NGI+H
Sbjct: 1 MGVPALFRWLTKKYPKIISPVVEEQPYEIDGVQYPVDTTKPNPNGEEMHNLYLDFNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQ---R 98
CSHP + P E ++ +IF Y + + M++P++L +AIDGVAPRAKMNQQ R
Sbjct: 61 PCSHPENKPPP--ANESEMMMEIFKYTDRVVNMVRPRRLLMIAIDGVAPRAKMNQQRARR 118
Query: 99 GRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQ 158
R R AKEA+ EK+ +F TL + QQ
Sbjct: 119 FRAARDAKEAD---------------EKKAEFQTL---------------------LRQQ 142
Query: 159 RGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITT 218
+ R + E EV+ +K +DSN ITPGTPFM L Q +RY+V+ K+ T
Sbjct: 143 QQDRDDVSDEEEVI-------------KKTWDSNVITPGTPFMFILAQSIRYWVQWKLNT 189
Query: 219 DKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDAD 278
D W ++ VI+S PGEGEHKIM +IR +S P+Y+PN RH +YGLDAD
Sbjct: 190 DP---------AWAELKVIISDASVPGEGEHKIMQFIRSQRSDPEYDPNTRHVMYGLDAD 240
Query: 279 LIMLGLCTHEPYFSLLREEV-----------------------KFNTKSNKG--GSQIVT 313
LIMLG+ THEP+F +LRE+V + N K G + T
Sbjct: 241 LIMLGIATHEPHFRVLREDVFTRDAKAKTCKLCGQQGHYAENCRGNAKVKAGEFDEKGTT 300
Query: 314 PEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLP 373
E F LH+ ++R+YL E +P F F +E +DDWV M F +GNDF+P+LP
Sbjct: 301 EELKPFIWLHVPVLREYLAAEMFVPGQP----FRFDLERALDDWVFMCFFVGNDFLPHLP 356
Query: 374 DLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
L I + L ++++ LP + GY+ G +NL R + L LA + F+ +
Sbjct: 357 SLDIHEDGIDKLIAIWRDNLPLMGGYVTCDGNVNLARAQIILQGLAKQEDAIFKRR 412
Score = 173 bits (438), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 106/160 (66%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K + E A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D
Sbjct: 598 YYEQKFHVSPNDIEFRHKVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADFVDID 657
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ +K++ G PF P++QL+ VLPA+S +P + LMT E+S I+++YPE+F DLNGK
Sbjct: 658 KMEVKFDKGTPFRPYEQLMGVLPASSNHAIPPAFHPLMTDEDSEIVDFYPEDFDLDLNGK 717
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
KQ W+AVVL+PFIDE +L+KAM LL+D+ER+RN G
Sbjct: 718 KQSWKAVVLLPFIDEKRLLKAMGTKYPLLSDDERARNEFG 757
>gi|440466364|gb|ELQ35636.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae Y34]
gi|440487857|gb|ELQ67622.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae P131]
Length = 1041
Score = 271 bits (692), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 172/493 (34%), Positives = 251/493 (50%), Gaps = 123/493 (24%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE--------YQIP-----------EFDNLYLDMNGII 40
MG+P FR++S +YP +S V+ + IP EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDKPVEMEDGTSIPVDITKPNPNGEEFDNLYLDMNGIV 60
Query: 41 HNCSHPNDN-DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
H C+HP D P E+++ +IF Y + +F M++P+K+ +A+ G
Sbjct: 61 HPCAHPEDRPAPQ---DEEEMMLEIFKYTDRVFNMVRPRKVLMIAV-------------G 104
Query: 100 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQR 159
+ + + E+ + P + +DGVAPRAKMNQQR
Sbjct: 105 KDSKHYPKCEL------------------------YINPIQPL---LDGVAPRAKMNQQR 137
Query: 160 GRRFRSAKEAEVLEQKAKE----------------KGERLP--TEKRFDSNCITPGTPFM 201
RRFRSA+EA+ +KA++ E L T+K FD+N ITPGTPFM
Sbjct: 138 SRRFRSAQEAK---EKAEDKLELLKLLKQQKGGDVSAETLESVTKKAFDTNSITPGTPFM 194
Query: 202 CRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSK 261
L LRY+ K+ TD W +V +I+S PGEGEHKIMD++R +S
Sbjct: 195 DILAGSLRYWCAYKLNTDP---------GWANVKIIISDATVPGEGEHKIMDFVRSQRSS 245
Query: 262 PDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTK--------SNKGGSQIVT 313
PD++PN RH +YGLDADLIMLGL THEP+F +LRE+V F KG
Sbjct: 246 PDHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQQGKPRLCKLCGQKGHDAQQC 305
Query: 314 PEETK-----------------FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDD 356
E K F LH++++R+YL +E L P L F F +E +DD
Sbjct: 306 KGEVKKKEGEFDEKQNAEPLKPFIWLHVAILREYLNVE---LYVPD-LPFRFDLERAVDD 361
Query: 357 WVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLT 416
W+ + +GNDF+P+LP L I + L ++++ LP + GY+ + G+++L+R + +
Sbjct: 362 WIFLCCFVGNDFLPHLPALEIRENGIITLTSIWKQNLPRMGGYVTKDGHIDLERVQYIMD 421
Query: 417 KLASFDFEQFREK 429
LA + FR++
Sbjct: 422 GLAKQEDSIFRKR 434
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 96/160 (60%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y+ + W L YY+ GC SW W+YP+HYAP+ D
Sbjct: 582 YYEQKFHVDPKNVEFRHKVAHAYVEGLSWVLLYYFQGCPSWEWFYPYHYAPFAQDFVGLK 641
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
L + +E G P++QL++VLPAAS++ LP + +LMT E+S I+++YPE+F DLNGK
Sbjct: 642 DLEISFEKGRKSKPYEQLMSVLPAASRDNLPPIFHDLMTKEDSEIIDFYPEDFEVDLNGK 701
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V L+PFI+ +L+ A+ A L+ +E +RN G
Sbjct: 702 KFAWQGVALLPFIEMDRLLAAVQAKYPELSADEAARNGLG 741
>gi|312371116|gb|EFR19376.1| hypothetical protein AND_22597 [Anopheles darlingi]
Length = 374
Score = 270 bits (691), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 160/416 (38%), Positives = 219/416 (52%), Gaps = 57/416 (13%)
Query: 490 SDEDEEWRTN----------FFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQW 539
DEDEE + + F EF +K +YY K+ YA +V +QAECYIRA+QW
Sbjct: 5 GDEDEESQISVGDIENDPVLFEKEFKSYKRNYYMTKMGYADFNEDVRAEQAECYIRALQW 64
Query: 540 NLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKEL 599
LHYYY G VSWSWYYPHHYAP+ISD+ F HL L+++M PFLPFQQLL+VLPAASK
Sbjct: 65 TLHYYYRGVVSWSWYYPHHYAPFISDVDHFDHLKLEFDMARPFLPFQQLLSVLPAASKSH 124
Query: 600 LPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLL 659
LP Y LM NSP+ ++YP EF+TDLNGK+Q WEAVVLIPFIDE +L+KAM + L
Sbjct: 125 LPAAYHQLMIDPNSPVYDFYPPEFSTDLNGKQQSWEAVVLIPFIDERRLLKAMKTCDEYL 184
Query: 660 TDEERSRNRHGPMLVYTYSNVNLGTALAPDY-FPAINENHAVEKPLYRDDIYVHPNKLRK 718
TDEE+ RN HGPM+ Y Y + N L Y F I+ ++RDD++V NKL
Sbjct: 185 TDEEKQRNVHGPMIQYRY-DANQQDPLEAKYGFERIDILPVKRAEIFRDDLHVAENKLVL 243
Query: 719 GLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVA 778
G + L+ Y T +
Sbjct: 244 GPSKGSLLEGYAT-----------------------------------GAQRAAGYGNTG 268
Query: 779 DQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITD 838
+ I+G+ +++++PHL+E +V +V+ K + + V ER F + KSI +
Sbjct: 269 NGIVGQIVYVSWPHLMEAKVDSVSDKHQLLKRINEAEKVDER-------MFNIWCKSIAE 321
Query: 839 GYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLN 894
T+L + +G LV+ + +Y G V + + + V Y + V N
Sbjct: 322 HNETRLALSVGPIHQLVHVRTCVGTEYVLKGDGFVLNR---LWNNVAMPYPAQVYN 374
>gi|242067311|ref|XP_002448932.1| hypothetical protein SORBIDRAFT_05g001880 [Sorghum bicolor]
gi|241934775|gb|EES07920.1| hypothetical protein SORBIDRAFT_05g001880 [Sorghum bicolor]
Length = 712
Score = 270 bits (691), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 191/591 (32%), Positives = 290/591 (49%), Gaps = 114/591 (19%)
Query: 125 EKRFDFI--TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA--------EVLEQ 174
E F+++ + P +L ++A+DGVAP AKMN+ R RF SA+ A E+ ++
Sbjct: 35 ESLFEYMDRLFRIVRPTRLLYLAVDGVAPCAKMNRVRRGRFHSARMATSEEIEDYEMRKE 94
Query: 175 KAKEKGERLPTE--KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWK 232
+ E P E + D N ITPGT FM +L Q L Y+++ + +D W W+
Sbjct: 95 LRAQGKEETPQEISEVSDPNVITPGTEFMEKLSQALEYYIRGRFNSDP--------W-WR 145
Query: 233 DVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFS 292
D+ VILS PGEGEHKIM ++R + Y+PN RHCL+G DADLIML L +HE +FS
Sbjct: 146 DIMVILSDANVPGEGEHKIMSFVRAQGNMEGYDPNTRHCLFGHDADLIMLALASHEVHFS 205
Query: 293 LLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIEN 352
+LRE L++ ++R+YLE+EF K+ +P + P IE
Sbjct: 206 ILRE------------------------FLNIWVLREYLEIEF-KILDP--VCEP-DIER 237
Query: 353 IIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYI--------NEGG 404
+IDD++ + FL+GNDFIP++P L GA+ LL +VY+ + GYI G
Sbjct: 238 LIDDFIFICFLMGNDFIPHIPSLETHEGAVDLLIEVYKTTFNKMGGYIINTDKVKDKNGA 297
Query: 405 YLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALI 464
YL + R E F +L+ ++ + F ++Y Q L K + + + E+ L L+
Sbjct: 298 YLEVSRLEIFFHELSMYEEKIFLKRYKLEQDLLLKTYHEMLREASESERPELRQKLDDLL 357
Query: 465 KATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSE-FGQHKTDYYHYKLDYAKVTN 523
+ YD + W++ FF E FG A+ +N
Sbjct: 358 FNEERPYDRIRLGLPG---------------WKSRFFREYFG-------------AETSN 389
Query: 524 EVLR---DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGE 580
E+ + D A+ Y+ + W L Y+ SWSWYYP + AP++SD+K S +++ + + +
Sbjct: 390 EIGKLQNDMAQKYLEGLCWVLQCYFADVPSWSWYYPFYVAPFVSDLKGLSRVDISFTVDK 449
Query: 581 PFLPFQQLLAVLPAASKELLPEPYQNLMTLE--NSPILEYYPEEFATDLNGKKQDWEAVV 638
P PF QL+AVLP S LP+ Y+ +M + + P LE+ D G+ W
Sbjct: 450 PLRPFDQLMAVLPMQSWCALPKCYKEMMGRKEFDYPRLEH-------DTKGRHFLWNG-- 500
Query: 639 LIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPD 689
I E L+ A V+ LT E RN + +G +APD
Sbjct: 501 ----ISEELLLSATKVVDKKLTTHESRRN----------TTSGIGGWIAPD 537
>gi|336271881|ref|XP_003350698.1| hypothetical protein SMAC_02370 [Sordaria macrospora k-hell]
gi|380094860|emb|CCC07362.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 955
Score = 270 bits (689), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 170/475 (35%), Positives = 242/475 (50%), Gaps = 117/475 (24%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ---------IP-----------EFDNLYLDMNGII 40
MG+P FR++S +YP + V E Q IP EFDNLYLDMNG
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVVEDQPITMPDGTVIPVDCTKPNPNGEEFDNLYLDMNG-- 58
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
P D E+++ ++F Y + + M++P+KL +A+DGVAPRAKMNQQR R
Sbjct: 59 --PPAPKD--------EEEMMVEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSR 108
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+A+EA +E++ E + F+ L + +Q G
Sbjct: 109 RFRAAREA--MEKE----------EDKQKFVEL---------------------LKKQNG 135
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
+ + E + +KA FDSN ITPGTPFM L L+Y+ K+ TD
Sbjct: 136 NMIQQEEPVETVVKKA------------FDSNSITPGTPFMDILAASLKYWCSYKLNTDP 183
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W ++ VI+S PGEGEHKIM+++R + P+++PN RH +YGLDADLI
Sbjct: 184 ---------AWANMKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGLDADLI 234
Query: 281 MLGLCTHEPYFSLLREEVKFNTKS---------NKGGSQIVTPEETK------------- 318
MLGL THEP+F +LRE+V F S KG + E K
Sbjct: 235 MLGLATHEPHFRVLREDV-FAQDSRPRLCKICGQKGHDAMNCKGEAKEKNGEFDEKDAVI 293
Query: 319 ----FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPD 374
F LH+S++R+YL +E L PG L F F++E IDDWV M F +GNDF+P+LP
Sbjct: 294 PLKPFIWLHVSILREYLAIE---LDVPG-LPFQFNLERAIDDWVFMCFFVGNDFLPHLPA 349
Query: 375 LHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
L I + L ++++ LP + GY+ + G +L+R + + LA + FR +
Sbjct: 350 LEIRENGIDTLTAIWKDNLPVMGGYLTKDGQADLERVQYIMAGLAKQEDAIFRRR 404
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 99/160 (61%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K + + Y + W L YY+ GC SW W+YP+HYAP+ +D D
Sbjct: 584 YYEQKFKVDRKDIDFRHKVGRAYAEGLAWVLEYYFQGCPSWEWFYPYHYAPFAADFVDLG 643
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ +K+E G PF+QL++VLPAAS+ +PE + LMT ENS I+++YPEEF DLNGK
Sbjct: 644 KMEIKFEKGRISRPFEQLMSVLPAASRHAIPEVFHPLMTEENSEIIDFYPEEFEIDLNGK 703
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V L+PFID +L+ AM+ HLL+ E++ RN G
Sbjct: 704 KMAWQGVALLPFIDMPRLLSAMETKTHLLSPEDQLRNTPG 743
>gi|320169903|gb|EFW46802.1| 5'-3' exoribonuclease 2 [Capsaspora owczarzaki ATCC 30864]
Length = 1548
Score = 269 bits (688), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 167/472 (35%), Positives = 235/472 (49%), Gaps = 116/472 (24%)
Query: 1 MGVPKFFRYISERYPCLSEVVR-EYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MGV + R + ERYP + + P FDNLYLD NGI HN SH D+ I+E
Sbjct: 1 MGVIRLTRALVERYPLILRTIGPSNDAPLFDNLYLDFNGIAHNASHGKDDAGAAAISE-- 58
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+E++ M F AID + A+
Sbjct: 59 --------LEMMSAM-------FAAIDRLVEVAR-------------------------- 77
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 179
P+KL ++AIDGVAPRAKMNQQR RR ++A+ AE +A
Sbjct: 78 ------------------PQKLVYIAIDGVAPRAKMNQQRQRRLKTARAAEKARTEASAI 119
Query: 180 G--------ERLPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
G E + E R FD+NCITPGT FM R+ L Y++K KIT W
Sbjct: 120 GDLTGAKPIEEIEAEARALPFDANCITPGTEFMDRMEAYLSYYIKRKITESPQWSS---- 175
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
+ VILSGH TPGEGEHKI+D+IR KS+P YNPN RHC+YGLDADLIML L HE
Sbjct: 176 -----LQVILSGHRTPGEGEHKIVDWIRAQKSQPGYNPNTRHCMYGLDADLIMLSLAMHE 230
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPEETKFFLLHLSLMRDYLELEFG------- 336
P+F++LRE+V F +K + S++ + LL++ L+R+YL++EFG
Sbjct: 231 PHFAILREKVLFRSKKASVNAADARSEVAFQATDELQLLYIGLLREYLDMEFGLSAGFKR 290
Query: 337 ----------KLKE-------PGVLS---FPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
KL E P + S +++E IDD++ + F+IGNDF+P++P
Sbjct: 291 SDGLRHGPLEKLMEQQQKAATPALTSQSVSAWNLERTIDDFIFLCFIIGNDFLPHMPGFD 350
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGG--YLNLKRFEKFLTKLASFDFEQF 426
I +G L ++ Y++V +L+ Y+ +N+ E+ L+ + + F
Sbjct: 351 IDSGGLDFAFEAYRQVRNSLNDYLVNASTVVVNIAFLEQLFAHLSRRERQLF 402
Score = 203 bits (516), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 207/855 (24%), Positives = 350/855 (40%), Gaps = 146/855 (17%)
Query: 505 GQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYIS 564
+K+ YY D LR + Y+ + W LHYY G SWSWY+P+H+AP+ S
Sbjct: 685 ASYKSSYYATYFDDVVSNTPSLRKLIKHYLEGLVWVLHYYTQGLASWSWYFPYHFAPFAS 744
Query: 565 DIKDFSHL--NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
D+ + L + + P P++QLLAVLP AS + LP P + LMT + E+Y +
Sbjct: 745 DMVNLGELYGQIHFPADSPLNPYEQLLAVLPLASAQFLPAPLRPLMT---GALAEFYRTD 801
Query: 623 FATDLNGKKQDWEAVVLIPFID------EVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
+ K ++++ V+LIPFID EV+ A + LT EER+R G ++
Sbjct: 802 HRVIPDEKGREYKDVLLIPFIDIERLRAEVRTALASGS----LTAEERTRGSLGQAQLFV 857
Query: 677 YS-NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVT---- 731
++ L + + A D Y P + K Q + L+ T
Sbjct: 858 HAPGKGLHRRRRLSSSSSSSPLPAFSANASAQD-YTPPARSSK--FQPIILEGCWTGLIP 914
Query: 732 ---HFPTLKHVQFTHKIENAKVKVFQQPSRNESIII---------VQDKV--------QV 771
FP+++ + + + V F S+N S+++ +Q + +V
Sbjct: 915 PPAGFPSIRGLALSPALRAVGVTPFGSASKNASMVLAVPDGDDETLQAAIASADGRLSEV 974
Query: 772 PSLKQV---------ADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAA 822
P+L +V A +LG +NYPHL+E RV AV + + K V
Sbjct: 975 PTLARVITKAKIAQSARALLGSICAVNYPHLLEARVVAVYEPEGVLRLSKKGQIV----R 1030
Query: 823 KDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRS 882
++ + + + + Y G+DI + ++V P E + G + ++ F
Sbjct: 1031 SELTEGWPAMVARLQEQYLKTQGIDIPSMHLIVEAAPFEGMRQTVD--GALIKE--FAEK 1086
Query: 883 TVTYAYQSAVLNLQQARESL---EYKTIDEIFYPGCQCFAL-SNPHYGSGGCVISTVKEE 938
T YA Q + + + E E + + F L + P YG G + +
Sbjct: 1087 TERYAVQVVLRRIPRVDERFVETEARPANARFTLNSPVLLLTAGPTYGQLGNITKLSADA 1146
Query: 939 NSFIKLSFKVQQEPDLSDLVHLQDDTVYN-----YLPSYTVASKLSISPLLLSRFTGSIF 993
++ V DL + N Y VA + +S L+LSR +GSI
Sbjct: 1147 HT---ADVSVSAAASAGDLDSAMSRLLLNTKQEEYFGVANVAQRTGVSALVLSRLSGSIT 1203
Query: 994 IIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTK---------KWFYTEQVVTLIK 1044
I + ++GL IKF R+ +V G+TRR E + +W Y+++ + L+
Sbjct: 1204 IKLDKKLAV---DVGLGIKFHRRALQVHGYTRRVEGSNDDRSRRGGPQWEYSQRAIDLVI 1260
Query: 1045 NYMKQFPEVFGFLKDHSSDDIYLRDDVF-----PHQGE---------------------- 1077
+ + FP++F ++ + + D Y D VF P G+
Sbjct: 1261 AFKEAFPDLFAAVERNPNLDDYPLDFVFGTASAPAAGDANAESTAETVSAEASSDELLKA 1320
Query: 1078 -------------------QRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD 1118
R++Q++SWL+E P AK + C A + VVSLIE
Sbjct: 1321 DPSESSVATALSSIDQHARSRLSQLLSWLRECPAAKLPLISCDAHALSDVVVSLIEGEAQ 1380
Query: 1119 TCEKVEKQITLFVKP---NKLYIP---KPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLG 1172
+ + + VK ++ P + + T + RVV + +VP G
Sbjct: 1381 RINSLADKKRVNVKGLSHTEMLSPCDVPLSRSRATGAGHTVVRPGHRVVYLMSHGSVPFG 1440
Query: 1173 YRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLC 1230
+GT+I ++ G+ +V FD+P G + RC + RG +P ++N++
Sbjct: 1441 EKGTVISVL-GDC-----VEVAFDRPLLSGTTLHNRCQDRRGAAIPLAYLLNITAPTHAV 1494
Query: 1231 GNSNPHVKNINVMQS 1245
SN V+++ V S
Sbjct: 1495 HASN--VRHVEVAAS 1507
>gi|403163709|ref|XP_003323763.2| hypothetical protein PGTG_05665 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164418|gb|EFP79344.2| hypothetical protein PGTG_05665 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1203
Score = 269 bits (688), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 173/463 (37%), Positives = 244/463 (52%), Gaps = 90/463 (19%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FR++S++YP + E V E +P + + + + S N N F
Sbjct: 1 MGVPALFRWLSKKYPKVVEQVIE-DVPAQNAVDGGTEEVPIDMSQRNPNGMEF------- 52
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+ G++ EAE++ + K
Sbjct: 53 ------------------DNLYLDMNGIV--HPCTHPEGKK-PPETEAEMMIEVFKY--- 88
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA---- 176
TE+ + + P+KL +AIDGVAPRAKMNQQR RRFR+A+EA+V E++
Sbjct: 89 ---TERVVNMVR-----PRKLLMIAIDGVAPRAKMNQQRSRRFRAAQEAKVKEEEKQALI 140
Query: 177 ---KEKGERLPTE-----KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
K++G+ LP + K +DSN ITPGTPFM L + LRY++ K+ TDK
Sbjct: 141 EEYKQQGKELPEDYKTDKKAWDSNAITPGTPFMTLLTESLRYWIVYKMNTDK-------- 192
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
W + VILS PGEGEHKIMD++R +++P Y+PN +H +YGLDADLIML L THE
Sbjct: 193 -GWSQIQVILSDASVPGEGEHKIMDFVRRQRTQPSYDPNTKHVIYGLDADLIMLSLATHE 251
Query: 289 PYFSLLREEVKFNTKSNKG----------GSQI-------VTPEETK--------FFLLH 323
P+F +LRE+V + K KG SQ V +TK F L
Sbjct: 252 PHFKVLREDVFADQKKGKGCYTCGQLGHHSSQCQGKPKEKVDEHDTKQKPVERKPFIFLD 311
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
+ ++R+YL +E G L FPF IE IDDWVL+ F +GNDF+P+LP L I GA+
Sbjct: 312 VGILREYLAIELNI----GGLPFPFDIERAIDDWVLLIFFVGNDFLPHLPSLEIREGAID 367
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF 426
L K+++ L + G++ + G LNLKR E L LAS + E F
Sbjct: 368 TLLKIWKTNLGRMGGFLTDCGALNLKRTEIILEGLASREDEIF 410
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 97/143 (67%)
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVL 592
Y+ + W L YYY GC SW W+YP+HY+P+ SD + +K+ +G+PF P++QL+ V
Sbjct: 729 YVEGLAWVLAYYYQGCQSWQWFYPYHYSPFASDFTNLEEFEIKFNLGQPFKPYEQLMGVF 788
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAM 652
PAAS+ +P+ Y +LM ++SPI ++YPEEF D+NGKK W+ V L+PFI++ +L+ +M
Sbjct: 789 PAASRCHIPDVYHDLMMNDDSPIKDFYPEEFEIDMNGKKMLWQGVALLPFIEQDRLLNSM 848
Query: 653 DAVEHLLTDEERSRNRHGPMLVY 675
E L E++ RN G ++++
Sbjct: 849 KDCEDRLAPEDKIRNEPGHVVMF 871
>gi|147866227|emb|CAN79939.1| hypothetical protein VITISV_027778 [Vitis vinifera]
Length = 918
Score = 268 bits (686), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 168/513 (32%), Positives = 251/513 (48%), Gaps = 87/513 (16%)
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
D N ITPGT FM + + L+ ++ ++ + WKD+ VILS PGEGEH
Sbjct: 110 DPNIITPGTVFMHEVSKALQQYICSRMKHEA---------GWKDLKVILSDSNVPGEGEH 160
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV----------- 298
KIM + R +S PDYNPN HCLYGLDADLIML L THE +FS+LRE+V
Sbjct: 161 KIMSFXRLQRSLPDYNPNTLHCLYGLDADLIMLALATHEVHFSILREDVLTLEQRGSCES 220
Query: 299 ---------KFNT---KSNKGGSQIVTPEETKFFL---------------LHLSLMRDYL 331
K N+ KS Q++T ++T F+ LH+ ++R+YL
Sbjct: 221 AVETKTSPPKANSSLVKSRGWFKQVLTVDKTNSFIKNLESKSSIKMPYQFLHVWILREYL 280
Query: 332 ELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQE 391
EL+ K+ +P + E I+DD++ + F +GNDF+P++P L I GA+ LL VY++
Sbjct: 281 ELDM-KISDPPEKLKEINFERIVDDFIFLCFFLGNDFLPHMPTLEIHEGAIDLLMTVYKK 339
Query: 392 VLPTLDGYI-------NEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKF 444
+ GY+ E NL E T + ++ L G ++
Sbjct: 340 EFKNIGGYMVDMERNNEEDQSCNL---EIGSTNRGCTSPSGKARSSSSVENLGTSSGTEY 396
Query: 445 SDVFHKE----KSKEMDPDLAALIKATDDDYDDGTEEV----LNYANYEEYYYSDEDEEW 496
E +KEM L I+A D + G+ + L + ++E YY ++
Sbjct: 397 LITDKSELXTFYTKEMKKRLKENIRAKSDLWRSGSLGIDRVRLGHPGWKERYYKEK---- 452
Query: 497 RTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYP 556
D ++ ++ + Y + W L YY++G SW+W+YP
Sbjct: 453 -----------------CSCDTSQGIESTRKELVQKYTEGLLWVLQYYFSGVPSWTWFYP 495
Query: 557 HHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPIL 616
+HY P+ SD K S + K E G PF PF QL+ VLP +S LP+ YQ LM E+S I+
Sbjct: 496 YHYGPFASDFKGLSRVKAKXEKGSPFKPFDQLMGVLPPSSAHALPKAYQPLMIDEDSNII 555
Query: 617 EYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
++Y F D +GK+ W+ + +PFIDE +L+
Sbjct: 556 DFYNTNFEVDTDGKRFIWQGICKLPFIDEARLL 588
Score = 61.6 bits (148), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 18/87 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIP-----------EFDNLYLDMNGIIHNCSHPNDN 49
MGVP F+R++ +YP + VVR + EFDNLYLDMNGIIH C HP D
Sbjct: 1 MGVPSFYRWLVNKYPEI--VVRAVEDERESSSANPNGIEFDNLYLDMNGIIHPCFHPEDQ 58
Query: 50 --DPHFRITEKQIFQDIFHYIEILFRM 74
P T +++F +++ YI+ +F +
Sbjct: 59 IFPP---TTFEEVFNNMYEYIDRIFSI 82
>gi|356562399|ref|XP_003549459.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 1065
Score = 268 bits (684), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 172/474 (36%), Positives = 242/474 (51%), Gaps = 113/474 (23%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + + V+ QIP E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVIVDAIEEEAVVIDGVQIPVDTSNKNPNNIEYDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D E +F+ +F YI+ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPSPTSFDE--VFECMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FR+AK+A + T R +F ++ GR
Sbjct: 119 FRAAKDAADAAAEE--------TRLREEF--------------------------EKEGR 144
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ E++ + SN ITPGT FM L L+Y+V L++ D
Sbjct: 145 KLPPKGESQTFD-----------------SNVITPGTEFMAVLSIALQYYVHLRLNNDP- 186
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W+++ VILS PGEGEHKIM YIR ++ Y+PN RHCLYGLDADLIM
Sbjct: 187 --------GWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLYGLDADLIM 238
Query: 282 LGLCTHEPYFSLLRE-----------------------EVKFNTKS---NKGGSQIVTPE 315
L L THE +FS+LRE E K K+ ++ G IV
Sbjct: 239 LALATHEIHFSILREVVFTPGQDKCFLCGQMGHMAANCEGKAKRKAGEFDEKGEAIVA-- 296
Query: 316 ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
+ F L++ +R+YLE E ++ P F E I+DD++ M F +GNDF+P++P L
Sbjct: 297 KKPFQFLNIWTLREYLEYEM-RIPNP---PFEIDFECIVDDFIFMCFFVGNDFLPHMPTL 352
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I GA+ LL VY++ GY+ G +NL + E F+ + S++ + F+++
Sbjct: 353 EIREGAINLLIAVYKKEFREFGGYLTNGSTINLSKVEHFIQAVGSYEDKIFQKR 406
Score = 167 bits (422), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 114/191 (59%), Gaps = 9/191 (4%)
Query: 477 EVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRA 536
+V N N EE + W+ ++ E KT + + +D Y
Sbjct: 531 DVFNSKNAEEDKIKLGEPGWKERYYDEKFSAKT---------PEELEAIRKDVVLKYTEG 581
Query: 537 IQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAAS 596
+ W +HYYY G SW+W+YP+HYAP+ SD+K L++ +++G PF P+ QLL V PAAS
Sbjct: 582 LCWVMHYYYEGVCSWNWFYPYHYAPFASDLKGLGELDISFKLGTPFKPYDQLLGVFPAAS 641
Query: 597 KELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVE 656
LPEPY+ LMT +SPI+++YP +F D+NGK+ W+ + +PFIDEV+L+ + +E
Sbjct: 642 SHALPEPYRRLMTDPSSPIIDFYPVDFEVDMNGKRFAWQGIAKLPFIDEVRLLAEVQKIE 701
Query: 657 HLLTDEERSRN 667
+LLT EE+ RN
Sbjct: 702 NLLTPEEKRRN 712
>gi|312384683|gb|EFR29353.1| hypothetical protein AND_01770 [Anopheles darlingi]
Length = 867
Score = 268 bits (684), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 228/424 (53%), Gaps = 87/424 (20%)
Query: 28 EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDG 87
EFDNLYLDMNGIIH C+HP D P + E ++ IF I+ L +++P+K+ +MAIDG
Sbjct: 10 EFDNLYLDMNGIIHPCTHPEDK-PAPK-NEDEMMVAIFECIDRLMNIVRPRKVLYMAIDG 67
Query: 88 VAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAID 147
VAPRAKMNQQR RRFR++KEA +KA E
Sbjct: 68 VAPRAKMNQQRSRRFRASKEA---AEKATEVA---------------------------- 96
Query: 148 GVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQ 207
R R +AK A + + KEKG FDSNCITPGTPFM RL +
Sbjct: 97 -----------RIREELAAKGAILPPE--KEKG------SHFDSNCITPGTPFMDRLSKC 137
Query: 208 LRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPN 267
L+Y++ ++ + WKD+ VILS PGEGEHKIMDYIR + +PDY+PN
Sbjct: 138 LQYYIHDRMN---------NYPGWKDLKVILSDANVPGEGEHKIMDYIRKQRVQPDYDPN 188
Query: 268 MRHCLYGLDADLIMLGLCTHEPYFSLLREE--------------VKFNTKSNKG----GS 309
H L G DADLIMLGL THE +F+++REE + K G
Sbjct: 189 THHVLCGADADLIMLGLATHETHFTIIREEFLPNKDRPCDICQQIGHEMKDCSGLQSERD 248
Query: 310 QIVTP----EETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIG 365
I TP +ET+F + L+++++YL+ E L P L F + E +IDDWV M F +G
Sbjct: 249 MIKTPPGPGKETQFIFVRLNVLKEYLQKE---LDMPN-LPFAYDFERVIDDWVFMCFFVG 304
Query: 366 NDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQ 425
NDF+P+LP L I A+ L +Y++ + GY+ + G + L R E +T L + E
Sbjct: 305 NDFLPHLPSLEIRENAIDRLITLYKKCVYKTRGYLTDSGSVVLDRVEMIMTDLGFAEDEI 364
Query: 426 FREK 429
FR++
Sbjct: 365 FRQR 368
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 104/180 (57%), Gaps = 7/180 (3%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
DE W F K YY K D + + + A Y+R + W L YYY GC S
Sbjct: 478 DEVRLWEDGF-------KDRYYESKFDVSPQNIKFRQTVAWEYVRGLCWVLRYYYQGCAS 530
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
W WY+P+HYAP+ SD K ++N ++ G PF P QQL+ V PAAS+ +P + LM
Sbjct: 531 WEWYFPYHYAPFASDFKHLENVNTHFDRGTPFKPLQQLMGVFPAASRSHVPPAFAELMVD 590
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
SPI+++YP +F DLNGKK W+ V L+PF+DE +L +A D LLT EER RN +G
Sbjct: 591 PRSPIIDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRLFRATDPKVPLLTQEERLRNENG 650
>gi|326498799|dbj|BAK02385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 895
Score = 267 bits (683), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 194/576 (33%), Positives = 282/576 (48%), Gaps = 89/576 (15%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAK-------EAEVLEQKAKEKG-ERLP--TEK 187
P++L ++A+DGVAP AK N+ R F+S K EA +L + + +G E LP T +
Sbjct: 105 PRRLLYLAVDGVAPMAKTNKLRQGYFKSTKQGTDAEAEAVLLTEIFRVQGKEVLPRDTYE 164
Query: 188 RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEG 247
D PGT FM + L +F++ ++ TD WKD+ VILS PGEG
Sbjct: 165 FEDRTVKMPGTEFMETISVVLEWFIRERLNTDP---------EWKDIKVILSDANVPGEG 215
Query: 248 EHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKG 307
EHKIM +IR +S+ +Y+PN RHCLYG DADLIML L +HE + S+LR EV N +
Sbjct: 216 EHKIMSFIRAQRSRENYDPNTRHCLYGHDADLIMLALASHEVHISILR-EVNPNGRIPAR 274
Query: 308 GSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGND 367
Q V ++ ++R+YLELE +K PG E +IDD++ + L+GND
Sbjct: 275 LYQFV----------NIWVLREYLELE---MKTPGCKQ---DTERLIDDFICICCLMGND 318
Query: 368 FIPNLPDLHIINGALPLLYKVYQEVLPTLDGYI--------NEGGYLNLKRFEKFLTKLA 419
FIP +P L I A+ LL + Y+ + GYI G YL + R EKF +L+
Sbjct: 319 FIPRIPSLEIHEFAVDLLIETYKTAFNRMGGYIVNTNKIKDKHGVYLEVSRLEKFFHELS 378
Query: 420 SFDFEQFREKYADIQYLEGKMGKK-------------FSDVFHKEKSKE--------MDP 458
+ + ++Y + L K+ ++ S F ++S +
Sbjct: 379 LCEEKILLKRYELQEKLLCKIQREAAGNEESSDGSDLISKSFVTQRSTSTCSSNEYNVRK 438
Query: 459 DLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSE-FGQHKTDYYHYKLD 517
+ L +A +D + N A +++ W+ F+ E FG
Sbjct: 439 NTRELWRAVNDICCSKDDLFKNRACKQDHI----GPGWKFRFYREKFG------------ 482
Query: 518 YAKVTNEVLRDQAEC---YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNL 574
A+ +NEV R Q E Y+ + W L Y++ SW+W YP +YAP+ SD N+
Sbjct: 483 -AQTSNEVGRLQTEMVQKYLEGLCWMLQCYFSEVPSWTWCYPFYYAPFASDFNCLPQFNI 541
Query: 575 KYEMGEPFLPFQQLLAVLPAASKEL---LPEPYQNLMTLENSPILEYYPEEFATDLNGKK 631
+ M +P PF QL+AVLP L LP+ Y L+ E S I +YP EF D GK+
Sbjct: 542 SFTMDKPLRPFDQLMAVLPPEVHVLSSALPKCYSTLIGCEESTIQMFYPSEFEIDTYGKR 601
Query: 632 QDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
+ V +PFID L+ A VE LT +E RN
Sbjct: 602 FLSQGVAKLPFIDNKLLLSATKMVEKDLTYDEMRRN 637
Score = 73.6 bits (179), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 9/87 (10%)
Query: 29 FDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGV 88
+DNLYLDMN IIH C F Q++ F +++ LFR+++P++L ++A+DGV
Sbjct: 66 YDNLYLDMNEIIHKC---------FGRKNGQVYLRFFDHMDRLFRLVKPRRLLYLAVDGV 116
Query: 89 APRAKMNQQRGRRFRSAKEAEVLEQKA 115
AP AK N+ R F+S K+ E +A
Sbjct: 117 APMAKTNKLRQGYFKSTKQGTDAEAEA 143
>gi|148696569|gb|EDL28516.1| 5'-3' exoribonuclease 2, isoform CRA_d [Mus musculus]
Length = 1002
Score = 267 bits (683), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 239/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 20 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 70
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 71 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 93
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 94 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 153
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 154 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 205
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 206 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 264
Query: 289 PYFSLLREEVKFN-----TKSNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 265 PNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 324
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L FPF +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 325 LNVLREYLERELTM----ASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 380
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 381 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 429
Score = 157 bits (397), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 536 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 595
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ ++ ++E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 596 GIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSSIIDFYPEDFAID 655
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 656 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVLFV 705
>gi|26327149|dbj|BAC27318.1| unnamed protein product [Mus musculus]
Length = 952
Score = 267 bits (682), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 239/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFN-----TKSNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L FPF +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 157 bits (396), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ ++ ++E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVLFV 686
>gi|117606214|ref|NP_036047.2| 5'-3' exoribonuclease 2 [Mus musculus]
gi|30173483|sp|Q9DBR1.1|XRN2_MOUSE RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein Dhm1
gi|12836253|dbj|BAB23573.1| unnamed protein product [Mus musculus]
gi|26343603|dbj|BAC35458.1| unnamed protein product [Mus musculus]
gi|32451718|gb|AAH54743.1| 5'-3' exoribonuclease 2 [Mus musculus]
gi|74188828|dbj|BAE39193.1| unnamed protein product [Mus musculus]
gi|148696571|gb|EDL28518.1| 5'-3' exoribonuclease 2, isoform CRA_f [Mus musculus]
Length = 951
Score = 267 bits (682), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 239/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L FPF +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 157 bits (396), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ ++ ++E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVLFV 686
>gi|149041185|gb|EDL95118.1| 5'-3' exoribonuclease 2 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 951
Score = 266 bits (681), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 239/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L FPF +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + ++E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGSDVLFV 686
>gi|47198701|emb|CAF89019.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 265 bits (678), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/232 (59%), Positives = 164/232 (70%), Gaps = 22/232 (9%)
Query: 197 GTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHE---------TPGEG 247
GT FM RL +QL YFV K++TDKLW++ V V LSGHE TPGEG
Sbjct: 1 GTDFMARLQEQLEYFVHSKLSTDKLWQN---------VRVYLSGHEVRSQSTPTLTPGEG 51
Query: 248 EHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKG 307
EHKIM++IR + P ++PN RHCLYGLDADLIMLGL +HEP FSLLREEV+F K K
Sbjct: 52 EHKIMEFIRSENNGPGHDPNTRHCLYGLDADLIMLGLTSHEPNFSLLREEVRFGGK--KS 109
Query: 308 GSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGND 367
+I PEET F LLHLSLMR+Y++ EF L+ L + +E IIDDW+LMGFLIGND
Sbjct: 110 QKRITAPEETTFHLLHLSLMREYIDYEFSVLRNH--LGSTYDLERIIDDWILMGFLIGND 167
Query: 368 FIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
FIP+LP LHI + ALPLLYK Y VLP+L GY+NE G LNLK FEK+L KL+
Sbjct: 168 FIPHLPHLHISHDALPLLYKTYISVLPSLRGYLNENGNLNLKNFEKYLEKLS 219
>gi|300794747|ref|NP_001179401.1| 5'-3' exoribonuclease 2 [Bos taurus]
gi|296481414|tpg|DAA23529.1| TPA: 5'-3' exoribonuclease 2 [Bos taurus]
Length = 951
Score = 265 bits (677), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 238/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVD-----ASKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE AE+ +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAEIEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G + E E +F +
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDELADSLPCAEGEFIFIR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
LS++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LSVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 157 bits (396), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 125/236 (52%), Gaps = 16/236 (6%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN----------RHGPMLVYT 676
LNGK+ W+ V L+PF+DE +L A++ V LT EE RN +H P+ +
Sbjct: 637 LNGKRYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFI 696
Query: 677 YSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTH 732
G+ + D P + H ++ D+ V PN++ +C + + +TH
Sbjct: 697 LELYKTGSTESVDVPPEL--CHGIQGKFSLDEEAVLPNQV---VCSPIPVLKDLTH 747
>gi|74227371|dbj|BAE21766.1| unnamed protein product [Mus musculus]
Length = 417
Score = 265 bits (677), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 239/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFN-----TKSNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L FPF +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
>gi|190345269|gb|EDK37129.2| hypothetical protein PGUG_01227 [Meyerozyma guilliermondii ATCC
6260]
Length = 909
Score = 265 bits (676), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/322 (43%), Positives = 198/322 (61%), Gaps = 36/322 (11%)
Query: 132 TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVL-EQKAKEKGER-------- 182
L P+K+ +A+DGVAPRAKMNQQR RRFRSA+EA++ E+K ++ ER
Sbjct: 12 VLMMARPRKVLMIAVDGVAPRAKMNQQRSRRFRSAQEAKIADEEKQRQIKERELRGESID 71
Query: 183 --LPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
+ ++ +DSN ITPGTPFM +L LRY+V K+T+D W +V VI+S
Sbjct: 72 EAIKGKRSWDSNAITPGTPFMDKLATALRYWVAYKLTSDP---------GWANVQVIISD 122
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
PGEGEHKIM++IR +S P+Y+PN +HC+YGLDADLI LGL THEP+F +LRE+V
Sbjct: 123 ATVPGEGEHKIMNFIRSQRSDPEYDPNTKHCIYGLDADLIFLGLATHEPHFRVLREDVFA 182
Query: 301 N-TKSNKGGSQIVTPEETK-----------FFLLHLSLMRDYLELEFGKLKEPGVLSFPF 348
N ++ + QI +E K F LH++++R+YLE E L P L F F
Sbjct: 183 NQSRQLRVSDQISMTQEQKDSLAAQDARKPFLWLHINVLREYLETE---LFVPH-LPFTF 238
Query: 349 SIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNL 408
+E IDDW+ M F +GNDF+P+LP L + + + +L ++ V+P L GYI G LN+
Sbjct: 239 DVERAIDDWIFMCFFVGNDFLPHLPSLDVRDNGIDILLGCWKRVVPKLKGYITCDGNLNV 298
Query: 409 KRFEKFLTKLASFDFEQFREKY 430
+ EK + L + E FR+++
Sbjct: 299 ESVEKLMNALTYKEAEIFRKRH 320
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 117/191 (61%), Gaps = 10/191 (5%)
Query: 496 WRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYY 555
W + + Q K + L + +E R Y+ I W L YYY GC SW WYY
Sbjct: 463 WEPGYHDRYYQTK-----FHLTTQEEIDETRRGLVRSYLEGISWALLYYYQGCPSWQWYY 517
Query: 556 PHHYAPYISDIKDFSHL----NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLE 611
P+HYAP+ +D + S + +K+++G PF P++QL+AVLPAAS LPE +++LM+
Sbjct: 518 PYHYAPFAADFVNVSDIIGEEGIKFDLGTPFRPYEQLMAVLPAASGHNLPEVFRDLMSNP 577
Query: 612 NSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR-HG 670
+SPI+++YPEEF D+NGKK W+ + L+PFI+E +L+ +++ LTD+ER RN
Sbjct: 578 DSPIIDFYPEEFEIDMNGKKMSWQGIALLPFIEEKRLLSVLESKYPELTDDERDRNTLKS 637
Query: 671 PMLVYTYSNVN 681
+LV + NVN
Sbjct: 638 EVLVMSAQNVN 648
>gi|335304534|ref|XP_003134355.2| PREDICTED: 5'-3' exoribonuclease 2 [Sus scrofa]
Length = 950
Score = 265 bits (676), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 238/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVD-----ASKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPSAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
LS++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LSVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 686
>gi|378755557|gb|EHY65583.1| hypothetical protein NERG_01190 [Nematocida sp. 1 ERTm2]
Length = 613
Score = 265 bits (676), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 261/553 (47%), Gaps = 100/553 (18%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK+L ++A+DGVAPRAKMNQQR RRFR K G E FD N ITPG
Sbjct: 72 PKQLMYIAVDGVAPRAKMNQQRERRFRP---------KDPTDGH---VEGGFDPNTITPG 119
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
TPFM RLH + +++ + + + WK + VI SG + PGEGEHKI D++R
Sbjct: 120 TPFMYRLHTAITRYIEQR--------QSAGVNGWKQLAVIYSGCDVPGEGEHKIYDFVRS 171
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
+K +RH + GLDADLI L L THE F +LRE+V F + + Q+ +
Sbjct: 172 IKGS-----GVRHVICGLDADLIFLSLATHEQSFRVLREDVFFLEREERSSCQLCKKDGH 226
Query: 318 K-----------FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGN 366
+ L + ++R YL +F ++ F E I+DDW+ + F +GN
Sbjct: 227 STGNCNPNAFPPYIYLDIDIIRRYLYTDFST-----AINARFDFERILDDWIFVCFFVGN 281
Query: 367 DFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF 426
DF+P++P + I A+ + Y L T Y+ + +N++ + L +
Sbjct: 282 DFLPSIPSMDIKVAAIETITGSYLTNLITRRAYLTQDRKINMEELAVLMKTLGEQEDALL 341
Query: 427 REKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEE 486
R K L+ +KA +
Sbjct: 342 RSK------------------------------LSCYVKAAKRRGE-------------- 357
Query: 487 YYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYN 546
+ DE+ R F E G + +YY K+ +A E+ E YI+ + W L YYYN
Sbjct: 358 ---TPRDEDLRIKLFEEKG--RNEYYQMKM-HASTPEEITNSCIE-YIKGLSWILEYYYN 410
Query: 547 GCVSWSWYYPHHYAPYISDIKD--FSHLNL--KYEMGEPFLPFQQLLAVLPAASKELLPE 602
GC SW WYYP H+AP DI + SH N+ ++E+G+ P +Q++AVLP +S +PE
Sbjct: 411 GCPSWEWYYPMHFAPLARDIAETLLSHPNISFEFEVGKARKPLEQVMAVLPQSSSSSIPE 470
Query: 603 PYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDE 662
+ ++ P E YPE D+ GK Q W+ V LIPF+D K++ + L E
Sbjct: 471 GLYPI--FKDMP--ENYPETIKIDMFGKTQAWQGVPLIPFLDCDKMVTLVREYSADLPLE 526
Query: 663 ERSRNRHGPMLVY 675
+ RN G L++
Sbjct: 527 DIYRNVEGQDLLF 539
Score = 112 bits (279), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 75/104 (72%), Gaps = 7/104 (6%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MGVP FR+I++RYP +++V + DNLYLD+NGIIH C HP D +EK+
Sbjct: 1 MGVPSLFRWIAKRYPKSINKVANQ----GVDNLYLDLNGIIHPCCHPRGKDAPG--SEKE 54
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFR 103
+FQ+IF ++ L +++PK+L ++A+DGVAPRAKMNQQR RRFR
Sbjct: 55 MFQEIFRMVDHLVAIVRPKQLMYIAVDGVAPRAKMNQQRERRFR 98
>gi|301069399|ref|NP_001001944.2| 5'-3' exoribonuclease 2 [Danio rerio]
Length = 952
Score = 265 bits (676), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 168/469 (35%), Positives = 240/469 (51%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E++ + + ++ S PN N+ F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCLEEKAKEYNGVKIPVD-----TSKPNPNEVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDM---NGIIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-EVLEQKAK 177
F++I F P+++ +MAIDGVAPRAKMNQQR RRFR++KE E+ E+K K
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRASKEGVELAEEKQK 134
Query: 178 ------EKGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
E+G LP E+ RFDSNCITPGT FM L + LRY+V ++T D
Sbjct: 135 MREEVIERGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYVADRLTNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
W+++ V LS PGEGEHKIMDYIR + +P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWRNITVFLSDASVPGEGEHKIMDYIRRQRGQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFN-----TKSNKGGSQI--------------------VTPEETKFFLLH 323
P F+++REE K N ++ G +I + E +F +
Sbjct: 246 PNFTIIREEFKPNKPRPCALCSQMGHEIKDCQGLPREKQGEHDEFADTIPVSEQEFIFIR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E P FPFS E +DDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LAVLREYLERELTMASLP----FPFSFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y++V+ GY+ E G++NL+R E + + + F+++ D
Sbjct: 362 RLVGIYKDVVHKTGGYLTENGFVNLERVELIMQAVGVAEDNIFKKRKED 410
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D +E + + Y+ + W L YYY GC SW WY+P HYAP+ SD K
Sbjct: 525 KQRYYKTKFDVDATDDEFRKKVVQSYVEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFK 584
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
D + +E G +PF P +QL+ V PAAS LP ++ LM+ S I+++YP++FA D
Sbjct: 585 DIKGMFSDFEKGTKPFKPLEQLMGVFPAASGNFLPTTWRALMSDPESSIIDFYPDDFAID 644
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A+ V + LT EE RN G +++
Sbjct: 645 LNGKKYAWQGVALLPFVDERRLRAALAEVYNDLTPEEVRRNSLGSDVMFV 694
>gi|28503006|gb|AAH47182.1| 5'-3' exoribonuclease 2 [Danio rerio]
gi|182889854|gb|AAI65726.1| Xrn2 protein [Danio rerio]
Length = 540
Score = 265 bits (676), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 168/469 (35%), Positives = 240/469 (51%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E++ + + ++ S PN N+ F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCLEEKAKEYNGVKIPVD-----TSKPNPNEVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-EVLEQKAK 177
F++I F P+++ +MAIDGVAPRAKMNQQR RRFR++KE E+ E+K K
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRASKEGVELAEEKQK 134
Query: 178 ------EKGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
E+G LP E+ RFDSNCITPGT FM L + LRY+V ++T D
Sbjct: 135 MREEVIERGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYVADRLTNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
W+++ V LS PGEGEHKIMDYIR + +P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWRNITVFLSDASVPGEGEHKIMDYIRRQRGQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFN-----TKSNKGGSQI--------------------VTPEETKFFLLH 323
P F+++REE K N ++ G +I + E +F +
Sbjct: 246 PNFTIIREEFKPNKPRPCALCSQMGHEIKDCQGLPREKQGEHDEFADTIPVSEQEFIFIR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L FPFS E +DDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LAVLREYLERELTM----ASLPFPFSFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y++V+ GY+ E G++NL+R E + + + F+++ D
Sbjct: 362 RLVGIYKDVVHKTGGYLTENGFVNLERVELIMQAVGVAEDNIFKKRKED 410
>gi|74207538|dbj|BAE40020.1| unnamed protein product [Mus musculus]
Length = 951
Score = 264 bits (675), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 238/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
+++R+YLE E L FPF +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 PNVLREYLERELTM----ASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 157 bits (396), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ ++ ++E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVLFV 686
>gi|344279981|ref|XP_003411764.1| PREDICTED: 5'-3' exoribonuclease 2 [Loxodonta africana]
Length = 950
Score = 264 bits (675), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 239/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVD-----ASKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKRGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F IE IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y++V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKKVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIASMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGGDVLFV 686
>gi|253743695|gb|EET00027.1| 5'-3' exoribonuclease 2 [Giardia intestinalis ATCC 50581]
Length = 900
Score = 264 bits (675), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 223/772 (28%), Positives = 328/772 (42%), Gaps = 195/772 (25%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPE----------------FDNLYLDMNGIIHNCS 44
MGVP FFR+I +RY + + V E P+ DNLY D NG+I
Sbjct: 1 MGVPSFFRWIVQRYSSVIDNVLE-AFPDTYEANIDGDALPLGFAIDNLYFDTNGLI---- 55
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
HP FH P + Q
Sbjct: 56 HP-----------------CFH-----------------------PEGRAQPQ------- 68
Query: 105 AKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFR 164
EAEV E+ + + C P++L ++A+DG APRAK+NQQR RRF
Sbjct: 69 -TEAEVFEEIFQVLDR-----------VVSICRPRRLLYLAVDGPAPRAKLNQQRSRRFM 116
Query: 165 SAKEAEVLEQKAKEK----GERLPTEKRF----------------DSNCITPGTPFMCRL 204
+A E ++ E+ + + G+ P+ K+ DSN ITPGTPFM RL
Sbjct: 117 AAYERQIKERVQERRLMSFGDVEPSLKKLGSEMNDATESTAQTNLDSNAITPGTPFMSRL 176
Query: 205 HQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDY 264
L+Y+V + KLW+ + V+ + +PGEGEHKIM ++R +S+P Y
Sbjct: 177 SVALKYYVANRQANSKLWRH---------LTVLYADAWSPGEGEHKIMSFVRVQRSQPGY 227
Query: 265 NPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV---------------KFNTKSNKGGS 309
+P HC+YGLDADLIML L THEP F +LR+ V + +++ N G
Sbjct: 228 DPCTIHCIYGLDADLIMLALGTHEPNFLILRDVVDTANLKRTCTRCGHLRISSEHNTG-- 285
Query: 310 QIVTPEETK-------------------------FFLLHLSLMRDYLELEFGKLKEPGVL 344
V P T+ F LH+S +R+YL+ EF
Sbjct: 286 -TVDPFTTRHEDQGGMDCPFYPGSSLRPVAFRSPFQFLHVSRLREYLQREFDATD----- 339
Query: 345 SFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLD-GYINEG 403
E IDD+V + FL+GNDF+P++ L I A+ + Y+++ + G++ G
Sbjct: 340 ---VIFERAIDDFVFLTFLVGNDFLPHIQCLDIREDAVIRMIYFYKQLKRSRKIGFLTTG 396
Query: 404 GYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDP----- 458
+N+ F L +LA + F+ + + GK + + SK+ P
Sbjct: 397 SDVNIGDFHVLLRELAEQEARIFKARAS------GKANARHAQASETPDSKDETPGERAV 450
Query: 459 ---------DLAALIKATDDDY----DDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFG 505
D +IK DDY D + Y E + ++ G
Sbjct: 451 REYFQFFRKDDKRIIKDAMDDYYALHDKPLPPTTVAVKHILIKYELEKPGYAQRYYLGIG 510
Query: 506 QHKTDYYHYKLDYAKVTNEV-LRDQAEC--YIRAIQWNLHYYYNGCV-SWSWYYPHHYAP 561
D+ + K E+ R Q C YI + W YY+ V W WYYP+H++P
Sbjct: 511 L-MDDFPEKNYESDKFKAELKQRIQTMCYHYIDGLIWVFRYYFLPKVEDWGWYYPYHHSP 569
Query: 562 YISDIKDFSHLNLKYE-----MGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPIL 616
+ D+ S + PF P++QLLAV+P AS LLP ++LMT S +
Sbjct: 570 LLVDLAAASQTYTRTWKQHTVSNRPFNPYEQLLAVMPPASAALLPPVMRHLMTDPASDLN 629
Query: 617 EYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
++YP DL+ K W+ V+L+PFI+ +LI A LT E+ RNR
Sbjct: 630 KFYPSLIKCDLSEKTALWKGVLLLPFINSSELISAAQKSYGQLTPLEQQRNR 681
>gi|296200314|ref|XP_002747533.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Callithrix jacchus]
Length = 950
Score = 264 bits (674), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 238/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (391), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 686
>gi|403283597|ref|XP_003933201.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 950
Score = 264 bits (674), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 238/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVD-----ASKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 686
>gi|348581480|ref|XP_003476505.1| PREDICTED: 5'-3' exoribonuclease 2-like [Cavia porcellus]
Length = 950
Score = 264 bits (674), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 238/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKVPVD-----ASKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVLFV 686
>gi|351715914|gb|EHB18833.1| 5'-3' exoribonuclease 2 [Heterocephalus glaber]
Length = 950
Score = 264 bits (674), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 170/469 (36%), Positives = 238/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVD-----ASKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A + +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAIEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEIMAKGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELGDSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGADVLFV 686
>gi|390354844|ref|XP_795068.3| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Strongylocentrotus
purpuratus]
Length = 999
Score = 264 bits (674), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 238/466 (51%), Gaps = 96/466 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S++YP + E + E D + + ++ + PN ND F +
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCLEEKAKEVDEVRIPVD-----TTQPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCCHP----------------------------------ENKPAPKDE 74
Query: 121 RLPTEKRFDFIT--LKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQ---- 174
+ F +I + P++L +MAIDGVAPRAKMNQQR RRFR++KE+ Q
Sbjct: 75 DEMMREIFLYIDRLISIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKESRDKRQDIAR 134
Query: 175 ---KAKEKGERLP----TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
+ ++G LP E FDSNCITPGT FM RL LRY++ ++ +D
Sbjct: 135 IRAEIADRGGYLPPPKAKESHFDSNCITPGTEFMFRLADCLRYYITERLNSDP------- 187
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
WKD+ VILS TPGEGEHKIMDYIR ++ PD++PN HC+ G DADLIMLGL TH
Sbjct: 188 --GWKDIKVILSDANTPGEGEHKIMDYIRKQRANPDHDPNTHHCMCGADADLIMLGLATH 245
Query: 288 EPYFSLLREEVKFNTK-----SNKGGSQ-----------------IVTPE--ETKFFLLH 323
E F+++REE K N + N+ G + I P+ ET+F L
Sbjct: 246 EVNFTIIREEFKPNQRRACELCNQEGHEMKECQGLPKERANELDTIPVPQGAETEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++++YLE E P F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNILKEYLEKELWMTGLP----FTFDLERAIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
L ++Y++ + GY+ E G +NL+R + +T L + E F+++
Sbjct: 362 RLIRLYKKAVYKTKGYLTENGVVNLERVQLMMTDLGEAEDEIFKKR 407
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 100/170 (58%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D ++ CY+ + W L YYY GC SW WY+P+HYAP+ SD
Sbjct: 516 KERYYRNKFDVPSSDHDFRAKVVACYVEGLCWVLRYYYQGCASWKWYFPYHYAPFASDFL 575
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
D L +E G EPF P +QL++V PAAS LP+ ++ M +SPI++ YP++F D
Sbjct: 576 DIKDLPNDFEKGTEPFHPLEQLMSVFPAASGNFLPDSWREKMVDIDSPIIDLYPDDFQID 635
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L+ + V LT E+ RN +GP ++
Sbjct: 636 LNGKKYAWQGVALLPFVDEHRLLTTLAGVYDNLTPIEKKRNSNGPDRLFV 685
>gi|291388948|ref|XP_002710988.1| PREDICTED: 5'-3' exoribonuclease 2 [Oryctolagus cuniculus]
Length = 950
Score = 263 bits (673), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 238/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVD-----ASKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVLFV 686
>gi|73991017|ref|XP_534324.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Canis lupus
familiaris]
Length = 950
Score = 263 bits (673), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 238/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVD-----ASKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGGDVLFV 686
>gi|301775465|ref|XP_002923152.1| PREDICTED: 5'-3' exoribonuclease 2-like [Ailuropoda melanoleuca]
Length = 950
Score = 263 bits (673), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 238/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVD-----ASKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGGDVLFV 686
>gi|218190750|gb|EEC73177.1| hypothetical protein OsI_07223 [Oryza sativa Indica Group]
Length = 790
Score = 263 bits (673), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 205/675 (30%), Positives = 310/675 (45%), Gaps = 156/675 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ----IPEFDNLYLDMNGIIHNCSHPNDNDPHFRIT 56
MG+P F+R++ RYP + +E + I +DNLYLDMN
Sbjct: 1 MGIPSFYRWLVNRYPSIVSPAKESRPADGIVVYDNLYLDMN------------------- 41
Query: 57 EKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 116
QI FH P+ D AP +EV E
Sbjct: 42 --QIIHYSFH----------PQDQMNAGTDVCAP--------------TTVSEVFESM-- 73
Query: 117 EKGERLPTEKRFDFI--TLKFCFPKKLFFMAIDGVAPRAKMN-QQRGRRFRSAKEAEVLE 173
FD++ + P++L ++A+DGVAP AKMN +RGRRF A E E ++
Sbjct: 74 -----------FDYLDRLFRIVRPRRLLYLAVDGVAPCAKMNGMRRGRRFAWASEEEEMQ 122
Query: 174 QKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKD 233
+ +E D N ITPGT FM ++ Q L Y+++ ++ + WK
Sbjct: 123 KI---------SEGVSDPNVITPGTEFMEKISQALTYYIRARLNSSDP--------GWKH 165
Query: 234 VCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSL 293
+ VILS PGEGEHKIM +IR +S Y+PN RHCL+G DADLIML L +HE +FS+
Sbjct: 166 IMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLFGHDADLIMLALASHEVHFSI 225
Query: 294 LREEVKFNTKSNKGGSQIVTPE-ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIEN 352
LRE+ SQ+ + E ++ L++ ++R+YLE+E K+ +P + P IE
Sbjct: 226 LRED----------NSQLTEADPEKQYLFLNIWVLREYLEIEL-KILDP--VCEP-DIER 271
Query: 353 IIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFE 412
+IDD++ + FL+GNDFIP++P L + AL LL +VY+ + GGY+
Sbjct: 272 LIDDFIFICFLMGNDFIPHIPSLEMKEYALDLLIEVYKTTFNKM------GGYI------ 319
Query: 413 KFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYD 472
+ E+ ++K+A YLE + F FH+ E + + +
Sbjct: 320 --------VNIEKVKDKHA--AYLEVSRLEIF---FHQLSMYE-EKIFLKRYELEQESLK 365
Query: 473 DGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAEC 532
+VL A+ E E + D + E D+A+
Sbjct: 366 KSCRDVLREASESERL--------------ELSRKLEDLF--------FNEERPYDKAQK 403
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVL 592
Y+ + W L YY SWSWYYP + AP++SD+K + + + +P PF QL+AVL
Sbjct: 404 YLEGLCWMLQYYLADVPSWSWYYPFYVAPFVSDLKSHCRFEISFTVDKPLRPFDQLMAVL 463
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAM 652
P S LPE Y+ +M + E+ + D GK+ W+ I E +L++A
Sbjct: 464 PLRSSCALPECYRKVMGRK-----EFDHPKLQADTIGKRFLWKC------ISEEELLQAT 512
Query: 653 DAVEHLLTDEERSRN 667
++ L+ E RN
Sbjct: 513 KELDKELSMHEMRRN 527
>gi|83759101|gb|AAI10279.1| XRN2 protein [Bos taurus]
Length = 422
Score = 263 bits (673), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 173/480 (36%), Positives = 241/480 (50%), Gaps = 96/480 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNM 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE AE+ +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAEIEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G + E E +F +
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDELADSLPCAEGEFIFIR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
LS++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LSVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKK 443
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D + KK
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKKK 421
>gi|281339379|gb|EFB14963.1| hypothetical protein PANDA_012248 [Ailuropoda melanoleuca]
Length = 929
Score = 263 bits (673), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 238/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGGDVLFV 686
>gi|432092124|gb|ELK24810.1| 5'-3' exoribonuclease 2 [Myotis davidii]
Length = 925
Score = 263 bits (672), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 238/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKVPVD-----ASKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 152 bits (384), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 96/158 (60%), Gaps = 1/158 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 516 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 575
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ L +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 576 GIADLPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 635
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEER 664
LNGKK W+ V L+PF+DE +L A++ V LT EE+
Sbjct: 636 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEK 673
>gi|390354842|ref|XP_003728421.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Strongylocentrotus
purpuratus]
Length = 1010
Score = 263 bits (672), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 238/466 (51%), Gaps = 96/466 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S++YP + E + E D + + ++ + PN ND F +
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCLEEKAKEVDEVRIPVD-----TTQPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDM---NGIIHPCCHP----------------------------------ENKPAPKDE 74
Query: 121 RLPTEKRFDFIT--LKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQ---- 174
+ F +I + P++L +MAIDGVAPRAKMNQQR RRFR++KE+ Q
Sbjct: 75 DEMMREIFLYIDRLISIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKESRDKRQDIAR 134
Query: 175 ---KAKEKGERLP----TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
+ ++G LP E FDSNCITPGT FM RL LRY++ ++ +D
Sbjct: 135 IRAEIADRGGYLPPPKAKESHFDSNCITPGTEFMFRLADCLRYYITERLNSDP------- 187
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
WKD+ VILS TPGEGEHKIMDYIR ++ PD++PN HC+ G DADLIMLGL TH
Sbjct: 188 --GWKDIKVILSDANTPGEGEHKIMDYIRKQRANPDHDPNTHHCMCGADADLIMLGLATH 245
Query: 288 EPYFSLLREEVKFNTK-----SNKGGSQ-----------------IVTPE--ETKFFLLH 323
E F+++REE K N + N+ G + I P+ ET+F L
Sbjct: 246 EVNFTIIREEFKPNQRRACELCNQEGHEMKECQGLPKERANELDTIPVPQGAETEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++++YLE E P F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNILKEYLEKELWMTGLP----FTFDLERAIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
L ++Y++ + GY+ E G +NL+R + +T L + E F+++
Sbjct: 362 RLIRLYKKAVYKTKGYLTENGVVNLERVQLMMTDLGEAEDEIFKKR 407
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 100/170 (58%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D ++ CY+ + W L YYY GC SW WY+P+HYAP+ SD
Sbjct: 516 KERYYRNKFDVPSSDHDFRAKVVACYVEGLCWVLRYYYQGCASWKWYFPYHYAPFASDFL 575
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
D L +E G EPF P +QL++V PAAS LP+ ++ M +SPI++ YP++F D
Sbjct: 576 DIKDLPNDFEKGTEPFHPLEQLMSVFPAASGNFLPDSWREKMVDIDSPIIDLYPDDFQID 635
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L+ + V LT E+ RN +GP ++
Sbjct: 636 LNGKKYAWQGVALLPFVDEHRLLTTLAGVYDNLTPIEKKRNSNGPDRLFV 685
>gi|354468134|ref|XP_003496522.1| PREDICTED: 5'-3' exoribonuclease 2-like [Cricetulus griseus]
Length = 1045
Score = 263 bits (672), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 200/342 (58%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+ +E
Sbjct: 156 FEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILA 215
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 216 KGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 266
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 267 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 326
Query: 296 EEVKFN-----TKSNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G ++ E E +F + L+++R+Y
Sbjct: 327 EEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFIRLNVLREY 386
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E P FPF +E IDDWV M F +GNDF+P+LP L I GA+ L +Y+
Sbjct: 387 LERELTMASLP----FPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYK 442
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 443 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 484
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 104/193 (53%), Gaps = 24/193 (12%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 589 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 648
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQN-------------LMTL--- 610
+ ++ ++E G +PF P +QL+ V PAAS LP ++N L L
Sbjct: 649 GIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRNSRENIRQGLRETSLRFLVES 708
Query: 611 -------ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEE 663
++S I+++YPE+FA DLNGKK W+ V L+PF+DE +L A++ V LT EE
Sbjct: 709 IAVCSHSQDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 768
Query: 664 RSRNRHGPMLVYT 676
RN G +++
Sbjct: 769 NRRNSLGGDVMFV 781
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 79/112 (70%), Gaps = 12/112 (10%)
Query: 28 EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDG 87
EFDNLYLDMNGIIH C+HP D P + E ++ IF YI+ LF +++P++L +MAIDG
Sbjct: 121 EFDNLYLDMNGIIHPCTHPEDK-PAPK-NEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDG 178
Query: 88 VAPRAKMNQQRGRRFRSAK---EAEVLEQKAKE----KGERLPTE---KRFD 129
VAPRAKMNQQR RRFR++K EA V +Q+ +E KG LP E +RFD
Sbjct: 179 VAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFD 230
>gi|149408751|ref|XP_001505862.1| PREDICTED: 5'-3' exoribonuclease 2 [Ornithorhynchus anatinus]
Length = 950
Score = 263 bits (671), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 170/469 (36%), Positives = 239/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN N+ F +
Sbjct: 1 MGVPAFFRWLSRKYPSIVVNCVEEKPKECNGVKIPVD-----TSKPNPNEVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGAEATVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ +
Sbjct: 135 VREEILAKGGYLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNEP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQI--------------------VTPEETKFFLLH 323
P F+++REE K N N+ G ++ + E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQLGHEVKDCQGLAREKQGEFDELADSLPCSEGEFIYLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L FPF IE IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLEKELTMAS----LPFPFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKSVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 154 bits (389), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 100/170 (58%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTKPFRPLEQLMGVFPAASGNFLPPSWRKLMSDPESSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT +E RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPDENRRNSLGGDVLFV 686
>gi|123410059|ref|XP_001303596.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121884988|gb|EAX90666.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1018
Score = 263 bits (671), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 200/673 (29%), Positives = 311/673 (46%), Gaps = 131/673 (19%)
Query: 127 RFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTE 186
R+ + ++ C P L F+A+DG AP AK +QQR RR+ +A++ +
Sbjct: 64 RYTDMLVQICRPTDLIFIAVDGPAPNAKASQQRSRRYLAARDHSM--------------- 108
Query: 187 KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGE 246
FD I+PGT FM +L+ L F+K K D+ W VI S GE
Sbjct: 109 NSFDRTQISPGTVFMDKLNDALMEFIKDKREKDRTWSRPR---------VIYSSSFVAGE 159
Query: 247 GEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN- 305
GEHKI+D+IR ++ D++P++ HCLY DADLI LGL THE LLRE N + +
Sbjct: 160 GEHKILDFIREGRAISDWDPDLVHCLYSTDADLIFLGLQTHEKNILLLREADAANFQKSL 219
Query: 306 ---KGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGF 362
+ + I F L+H L+R+YL L+FG + IE +IDD++ + F
Sbjct: 220 SPFEAKTAITNYSFDAFELIHFPLLREYLLLDFGCGID--------EIEKVIDDFIAISF 271
Query: 363 LIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFD 422
LIGNDFIP+ D+ I +G + Y++ +I G + + + FL+ +
Sbjct: 272 LIGNDFIPSFTDIDIRSGDYNDVIDQYRKFRDETKSHIVVDGNFDFQNLKIFLSMVV--- 328
Query: 423 FEQFREKYADIQYL-EGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNY 481
++ R+ Y + E ++ KFS E +K
Sbjct: 329 -DKCRQNYGIKNEIPEEELSDKFS-----EANK--------------------------- 355
Query: 482 ANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNL 541
+Y E Y +E ++ DY + E+ ++ + A W L
Sbjct: 356 -SYLESKYPEESQK---------------------DYLGLCREM----SKSILDAFYWVL 389
Query: 542 HYYYNGCVSWSWYYPHHYAPYISDIKDF-SHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
YY +GC+SW+W YP+ YAP + + F ++E G+P LPF Q L++ P S L+
Sbjct: 390 RYYNSGCISWTWSYPYLYAPPLEVVIPFIDEYKPEFETGKPNLPFLQQLSIFPPQSAHLM 449
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
PEP NLM SPI ++YPE+F TDLNGKK ++ AVV++P +D + +A ++V +
Sbjct: 450 PEPLANLMKAP-SPIAKFYPEKFETDLNGKKAEYHAVVVLPILDYAAIQEAYESVISQVD 508
Query: 661 DEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGL 720
E+ RNR + + L P F ++ E D + P+
Sbjct: 509 AEDLKRNRLDDPVEF--------IGLEPKSF-KVSTGQTFES---VDMTEIAPD------ 550
Query: 721 CQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQ 780
C PT + +T +I N VK+F+ PS N S+++ + + K
Sbjct: 551 CT-----------PTFNTLPYTIEIRNVPVKIFEYPSHNASLVVKINPGKEMKCKDCL-P 598
Query: 781 ILGKTIFINYPHL 793
+L K I + YP+L
Sbjct: 599 LLNKQILMGYPYL 611
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNC-----SHPNDNDPHFRI 55
MGVP F+R++ +RYP + + + P + LY+DMNGI + + D P +
Sbjct: 1 MGVPGFYRWMVQRYPMVRRKMADPSRPIINRLYIDMNGIFYKALAATGTGNEDLTPALK- 59
Query: 56 TEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE 107
+IF Y ++L ++ +P L F+A+DG AP AK +QQR RR+ +A++
Sbjct: 60 ------AEIFRYTDMLVQICRPTDLIFIAVDGPAPNAKASQQRSRRYLAARD 105
>gi|387592987|gb|EIJ88011.1| hypothetical protein NEQG_01455 [Nematocida parisii ERTm3]
Length = 613
Score = 262 bits (670), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 182/583 (31%), Positives = 262/583 (44%), Gaps = 115/583 (19%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK L ++A+DGVAPRAKMNQQR RRFR K G E FD N ITPG
Sbjct: 72 PKHLLYIAVDGVAPRAKMNQQRERRFRP---------KDVSDGH---VEGGFDPNTITPG 119
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
TPFM RLH + +++ + + + WK + VI SG + PGEGEHK+ D++R
Sbjct: 120 TPFMYRLHCAIIRYIEQR--------QSAGINGWKQLAVIYSGCDVPGEGEHKVYDFVRS 171
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
+K +RH + GLDADLI L L THE F +LRE+V F K + ++ E
Sbjct: 172 IKGT-----GVRHAICGLDADLIFLSLATHEKSFKVLREDVFFLEKEERSTCKLCKKEGH 226
Query: 318 K-----------FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGN 366
+ L + ++R YL +F ++ F E I+DDW+ + F +GN
Sbjct: 227 STGNCNPNTFPPYIYLDIDIIRRYLYTDFST-----AINARFDFERILDDWIFVCFFVGN 281
Query: 367 DFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF 426
DF+P++P + I A+ + Y L T Y+ E +N+ + L + +
Sbjct: 282 DFLPSIPSMDIKVAAIETITTSYINNLLTRRQYLTEDSKINIAELSVLMDTLGETEEKLL 341
Query: 427 REKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEE 486
R K LA +K + EE L YEE
Sbjct: 342 RAK------------------------------LAGYVKNAKRRGEAPREEDLKVKLYEE 371
Query: 487 YYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYN 546
+ + +YY K+ +A ++ E Y+R + W L YYY
Sbjct: 372 -------------------KGRLEYYSSKM-HANSPEDITNGCVE-YLRGLSWILQYYYK 410
Query: 547 GCVSWSWYYPHHYAPYISDIKD----FSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPE 602
GC SW+WYYP H+AP DI D HL+ + G P +Q++AVLP +S +PE
Sbjct: 411 GCPSWNWYYPLHFAPLAQDIADTLKKMPHLSFDFSKGAARKPLEQVMAVLPPSSASSIPE 470
Query: 603 PYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDE 662
L + N + E YP+E D+ GK Q W+ V L+PF D KL+ + L +
Sbjct: 471 ---GLYPIFNE-MPENYPDEVKIDMFGKTQAWQGVALLPFFDCDKLVSLVREHSRNLPLD 526
Query: 663 ERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLY 705
E RN G L+ + P N+N+A + LY
Sbjct: 527 EIYRNVEGCDLL---------------FLPTANKNYATAETLY 554
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 74/103 (71%), Gaps = 5/103 (4%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FR+I++RYP + + E DNLYLD+NGIIH C HP + +P +E+++
Sbjct: 1 MGVPSLFRWIAKRYP---KSINAASGQEVDNLYLDLNGIIHPCCHPRNREPPG--SEEEM 55
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFR 103
F++IF ++ L +++PK L ++A+DGVAPRAKMNQQR RRFR
Sbjct: 56 FREIFKTVDHLVSIVRPKHLLYIAVDGVAPRAKMNQQRERRFR 98
>gi|71665066|ref|XP_819507.1| 5'-3' exonuclease XRND [Trypanosoma cruzi strain CL Brener]
gi|70884811|gb|EAN97656.1| 5'-3' exonuclease XRND, putative [Trypanosoma cruzi]
Length = 807
Score = 262 bits (669), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 175/551 (31%), Positives = 267/551 (48%), Gaps = 55/551 (9%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE----KGERL 183
+ K P+K + IDGVAP++KMNQQR RRFR+A+E +EV + E KG L
Sbjct: 85 LLYKIVRPRKCLVLCIDGVAPQSKMNQQRSRRFRAAEERIESEVFSAQCAEDVVKKGLPL 144
Query: 184 P-TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHE 242
P T R+D N ITP TPFM R+ + +F+ KI D W+ + VI S
Sbjct: 145 PQTRSRWDHNVITPSTPFMERVGLAIEWFIMKKINEDP---------AWRHIAVIFSDAH 195
Query: 243 TPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNT 302
PGEGEHKIM YIR ++++ YNP H ++G+DADLI LGL THE + ++LR ++
Sbjct: 196 VPGEGEHKIMHYIRELRAQLGYNPQTSHVIHGMDADLICLGLSTHEEHVTILRNQL---- 251
Query: 303 KSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGF 362
++ P+ +F L R L +FG + G + F E ++DD++ + F
Sbjct: 252 ------TETFQPDHNRFCYFSLYKYRLRLRDDFGGI---GQMDF----ERVLDDFIFLCF 298
Query: 363 LIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFD 422
+GNDF+P++P + I + LL Y Y+ GG +N KFL
Sbjct: 299 FVGNDFLPHVPLISIKTKGIELLLDHYVRGFKD-HSYLTHGGEVNYGNLAKFLRFFLVGY 357
Query: 423 FEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYA 482
E+ +++Y + + + K +E+ KE++ +L + + D + ++V N A
Sbjct: 358 MEKLKQEYGGVLRAKQRAKAKV-----EERVKELERELEEQLNSLQKDRKNA-QQVSNAA 411
Query: 483 NYEEYYYSDEDEEWR-------TNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAEC--- 532
+ + S E R F H+ YY K + E + +
Sbjct: 412 H--KLLLSIMRERARLVVDKEPLGFSYVNDDHRDKYYEKKFGWDPADREAFEKKIQLCCA 469
Query: 533 -YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF-SHLNLKYEMGEPFLPFQQLLA 590
Y+R QW + YY GC SW WYYP +YAP + D+ F + +K +G P P QLLA
Sbjct: 470 EYLRGTQWVMRYYTTGCPSWDWYYPFYYAPLLQDLAHFPGKVKVKMTLGAPRHPVLQLLA 529
Query: 591 VLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIK 650
VLP S E LPE + + S + +YPE+ D + ++ V+ +PF++ L
Sbjct: 530 VLPRLSVEALPEELHDAVKDPESVLGVFYPEKVDVDFSEAHFSYQGVLRLPFVNNSHLQS 589
Query: 651 AMDAVEHLLTD 661
A + L D
Sbjct: 590 ACQKLVRLEPD 600
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 85/153 (55%), Gaps = 25/153 (16%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY---------------QIPEFDNLYLDMNGIIHNCS 44
MG+ F+ ++ Y C+ +V E FDN YLDMNG+IH C
Sbjct: 1 MGIAGFYLWLQRWYGDCVEDVPEEVVKAALDGQPLPASSDTTQRFDNFYLDMNGLIHPCC 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
H + +E+++F+ IF +++L+++++P+K + IDGVAP++KMNQQR RRFR+
Sbjct: 61 H-DTAPLPEPESEEEMFERIFAQVDLLYKIVRPRKCLVLCIDGVAPQSKMNQQRSRRFRA 119
Query: 105 AK---EAEVLEQKAKE----KGERLP-TEKRFD 129
A+ E+EV + E KG LP T R+D
Sbjct: 120 AEERIESEVFSAQCAEDVVKKGLPLPQTRSRWD 152
>gi|349604825|gb|AEQ00267.1| 5'-3' exoribonuclease 2-like protein, partial [Equus caballus]
Length = 417
Score = 262 bits (669), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 238/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVSCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
>gi|146419185|ref|XP_001485556.1| hypothetical protein PGUG_01227 [Meyerozyma guilliermondii ATCC
6260]
Length = 909
Score = 261 bits (668), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/322 (43%), Positives = 198/322 (61%), Gaps = 36/322 (11%)
Query: 132 TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVL-EQKAKEKGER-------- 182
L P+K+ +A+DGVAPRAKMNQQR RRFRSA+EA++ E+K ++ ER
Sbjct: 12 VLMMARPRKVLMIAVDGVAPRAKMNQQRSRRFRSAQEAKIADEEKQRQIKERELRGESID 71
Query: 183 --LPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
+ ++ +DSN ITPGTPFM +L LRY+V K+T+D W +V VI+S
Sbjct: 72 EAIKGKRSWDSNAITPGTPFMDKLATALRYWVAYKLTSDP---------GWANVQVIISD 122
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
PGEGEHKIM++IR + P+Y+PN +HC+YGLDADLI LGL THEP+F +LRE+V
Sbjct: 123 ATVPGEGEHKIMNFIRLQRLDPEYDPNTKHCIYGLDADLIFLGLATHEPHFRVLREDVFA 182
Query: 301 N-TKSNKGGSQIVTPEETK-----------FFLLHLSLMRDYLELEFGKLKEPGVLSFPF 348
N ++ + QI+ +E K F LH++++R+YLE E L P L F F
Sbjct: 183 NQSRQLRVLDQILMTQEQKDSLAAQDARKPFLWLHINVLREYLETE---LFVPH-LPFTF 238
Query: 349 SIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNL 408
+E IDDW+ M F +GNDF+P+LP L + + + +L ++ V+P L GYI G LN+
Sbjct: 239 DVERAIDDWIFMCFFVGNDFLPHLPSLDVRDNGIDILLGCWKRVVPKLKGYITCDGNLNV 298
Query: 409 KRFEKFLTKLASFDFEQFREKY 430
+ EK + L + E FR+++
Sbjct: 299 ESVEKLMNALTYKEAEIFRKRH 320
Score = 164 bits (415), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 117/191 (61%), Gaps = 10/191 (5%)
Query: 496 WRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYY 555
W + + Q K + L + +E R Y+ I W L YYY GC SW WYY
Sbjct: 463 WEPGYHDRYYQTK-----FHLTTQEEIDETRRGLVRSYLEGISWALLYYYQGCPSWQWYY 517
Query: 556 PHHYAPYISDIKDFSHL----NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLE 611
P+HYAP+ +D + S + +K+++G PF P++QL+AVLPAAS LPE +++LM+
Sbjct: 518 PYHYAPFAADFVNVSDIIGEEGIKFDLGTPFRPYEQLMAVLPAASGHNLPEVFRDLMSNP 577
Query: 612 NSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR-HG 670
+SPI+++YPEEF D+NGKK W+ + L+PFI+E +L+ +++ LTD+ER RN
Sbjct: 578 DSPIIDFYPEEFEIDMNGKKMSWQGIALLPFIEEKRLLLVLESKYPELTDDERDRNTLKS 637
Query: 671 PMLVYTYSNVN 681
+LV + NVN
Sbjct: 638 EVLVMSAQNVN 648
>gi|395851965|ref|XP_003798517.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Otolemur garnettii]
Length = 951
Score = 261 bits (668), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 169/469 (36%), Positives = 238/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKSKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A + +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAALEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
W+++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWENLTVILSDASVPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 518 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 577
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 578 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 637
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 638 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGSDVLFV 687
>gi|197100138|ref|NP_001126942.1| 5'-3' exoribonuclease 2 [Pongo abelii]
gi|75040978|sp|Q5R4L5.1|XRN2_PONAB RecName: Full=5'-3' exoribonuclease 2
gi|55733236|emb|CAH93301.1| hypothetical protein [Pongo abelii]
Length = 950
Score = 261 bits (668), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 170/469 (36%), Positives = 237/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLLREKKVKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I A+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (391), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDADAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 686
>gi|297260411|ref|XP_001094734.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Macaca mulatta]
Length = 951
Score = 261 bits (667), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 170/469 (36%), Positives = 237/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I A+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 143 bits (360), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 102/172 (59%), Gaps = 4/172 (2%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLM--TLENSPILEYYPEEFA 624
+ + +E G +PF P +QL+ V PAAS E+ + +L+ +++S I+++YPE+FA
Sbjct: 577 GIADMPSDFEKGTKPFKPLEQLMGVFPAAS-EMCDFCFDSLLFSLIQDSSIIDFYPEDFA 635
Query: 625 TDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
DLNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 636 IDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 687
>gi|114681219|ref|XP_514546.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 7 [Pan troglodytes]
gi|397478693|ref|XP_003810674.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Pan paniscus]
gi|410223814|gb|JAA09126.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410252370|gb|JAA14152.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410308366|gb|JAA32783.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410334533|gb|JAA36213.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
Length = 950
Score = 261 bits (667), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 170/469 (36%), Positives = 237/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I A+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 686
>gi|402883351|ref|XP_003905183.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Papio anubis]
gi|355784737|gb|EHH65588.1| 5'-3' exoribonuclease 2 [Macaca fascicularis]
gi|380810654|gb|AFE77202.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
gi|383416591|gb|AFH31509.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
gi|384945858|gb|AFI36534.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
Length = 950
Score = 261 bits (667), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 170/469 (36%), Positives = 237/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I A+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 686
>gi|440911591|gb|ELR61240.1| 5'-3' exoribonuclease 2, partial [Bos grunniens mutus]
Length = 926
Score = 261 bits (667), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 199/342 (58%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE AE+ +Q+ +E
Sbjct: 57 FEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAEIEKQRVREEILA 116
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 117 KGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 167
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 168 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 227
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G + E E +F + LS++R+Y
Sbjct: 228 EEFKPNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDELADSLPCAEGEFIFIRLSVLREY 287
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I GA+ L +Y+
Sbjct: 288 LERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYK 343
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 344 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 385
Score = 157 bits (396), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 125/236 (52%), Gaps = 16/236 (6%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 492 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 551
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 552 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 611
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN----------RHGPMLVYT 676
LNGK+ W+ V L+PF+DE +L A++ V LT EE RN +H P+ +
Sbjct: 612 LNGKRYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFI 671
Query: 677 YSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTH 732
G+ + D P + H ++ D+ V PN++ +C + + +TH
Sbjct: 672 LELYKTGSTESVDVPPEL--CHGIQGKFSLDEEAVLPNQV---VCSPIPVLKDLTH 722
Score = 114 bits (286), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 80/112 (71%), Gaps = 12/112 (10%)
Query: 28 EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDG 87
EFDNLYLDMNGIIH C+HP D P + E ++ IF YI+ LF +++P++L +MAIDG
Sbjct: 22 EFDNLYLDMNGIIHPCTHPEDK-PAPK-NEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDG 79
Query: 88 VAPRAKMNQQRGRRFRSAK---EAEVLEQKAKE----KGERLPTE---KRFD 129
VAPRAKMNQQR RRFR++K EAE+ +Q+ +E KG LP E +RFD
Sbjct: 80 VAPRAKMNQQRSRRFRASKEGMEAEIEKQRVREEILAKGGYLPPEEIKERFD 131
>gi|18860916|ref|NP_036387.2| 5'-3' exoribonuclease 2 [Homo sapiens]
gi|30173484|sp|Q9H0D6.1|XRN2_HUMAN RecName: Full=5'-3' exoribonuclease 2; AltName: Full=DHM1-like
protein; Short=DHP protein
gi|12053189|emb|CAB66775.1| hypothetical protein [Homo sapiens]
gi|119630591|gb|EAX10186.1| 5'-3' exoribonuclease 2, isoform CRA_a [Homo sapiens]
gi|182888117|gb|AAI60100.1| 5'-3' exoribonuclease 2 [synthetic construct]
Length = 950
Score = 261 bits (667), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 170/469 (36%), Positives = 237/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I A+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 686
>gi|355729473|gb|AES09879.1| 5'-3' exoribonuclease 2 [Mustela putorius furo]
Length = 412
Score = 261 bits (667), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 238/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
>gi|193786052|dbj|BAG50941.1| unnamed protein product [Homo sapiens]
Length = 950
Score = 261 bits (667), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 170/469 (36%), Positives = 237/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I A+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 686
>gi|332238204|ref|XP_003268293.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Nomascus leucogenys]
Length = 950
Score = 261 bits (667), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 170/469 (36%), Positives = 237/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I A+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 686
>gi|410954455|ref|XP_003983880.1| PREDICTED: 5'-3' exoribonuclease 2 [Felis catus]
Length = 1093
Score = 260 bits (665), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 199/342 (58%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+ +E
Sbjct: 221 FEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILS 280
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 281 KGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 331
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 332 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 391
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G ++ E E +F L L+++R+Y
Sbjct: 392 EEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREY 451
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I GA+ L +Y+
Sbjct: 452 LERELTMAS----LPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYK 507
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 508 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 549
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 656 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 715
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 716 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 775
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 776 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGGDVLFV 825
Score = 112 bits (281), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 79/112 (70%), Gaps = 12/112 (10%)
Query: 28 EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDG 87
EFDNLYLDMNGIIH C+HP D P + E ++ IF YI+ LF +++P++L +MAIDG
Sbjct: 186 EFDNLYLDMNGIIHPCTHPEDK-PAPK-NEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDG 243
Query: 88 VAPRAKMNQQRGRRFRSAK---EAEVLEQKAKE----KGERLPTE---KRFD 129
VAPRAKMNQQR RRFR++K EA V +Q+ +E KG LP E +RFD
Sbjct: 244 VAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILSKGGFLPPEEIKERFD 295
>gi|426240937|ref|XP_004014350.1| PREDICTED: 5'-3' exoribonuclease 2 [Ovis aries]
Length = 897
Score = 260 bits (665), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 198/342 (57%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A + +Q+ +E
Sbjct: 28 FEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAIEKQRVREEILA 87
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 88 KGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 138
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 139 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 198
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G + E E +F L LS++R+Y
Sbjct: 199 EEFKPNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLSILREY 258
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I GA+ L +Y+
Sbjct: 259 LERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYK 314
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 315 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 356
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 125/236 (52%), Gaps = 16/236 (6%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 463 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 522
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 523 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 582
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN----------RHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN +H P+ +
Sbjct: 583 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFI 642
Query: 677 YSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTH 732
G+ + D P + H ++ D+ V P+++ +C + + +TH
Sbjct: 643 LELYKTGSTESVDVPPEL--CHGIQGKFSLDEEAVLPDQV---VCSPIPVLKDLTH 693
Score = 95.5 bits (236), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 71/104 (68%), Gaps = 12/104 (11%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MNGIIH C+HP D P + E ++ IF YI+ LF +++P++L +MAIDGVAPRAKMN
Sbjct: 1 MNGIIHPCTHPEDK-PAPK-NEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMN 58
Query: 96 QQRGRRFRSAK---EAEVLEQKAKE----KGERLPTE---KRFD 129
QQR RRFR++K EA + +Q+ +E KG LP E +RFD
Sbjct: 59 QQRSRRFRASKEGMEAAIEKQRVREEILAKGGYLPPEEIKERFD 102
>gi|417413149|gb|JAA52920.1| Putative 5'-3' exonuclease xrn1/kem1/sep1 involved in dna strand
exchange and mrna turnover, partial [Desmodus rotundus]
Length = 926
Score = 260 bits (665), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 199/342 (58%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+ +E
Sbjct: 58 FEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILA 117
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 118 KGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 168
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 169 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 228
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G ++ E E +F L L+++R+Y
Sbjct: 229 EEFKPNKPKPCGLCNQFGHEVKDCEGLPREKMGKHDELADSLPCTEGEFIFLRLNVLREY 288
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I GA+ L +Y+
Sbjct: 289 LERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYK 344
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 345 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 386
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 493 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 552
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 553 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 612
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 613 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGSDVLFV 662
Score = 112 bits (281), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 79/112 (70%), Gaps = 12/112 (10%)
Query: 28 EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDG 87
EFDNLYLDMNGIIH C+HP D P + E ++ IF YI+ LF +++P++L +MAIDG
Sbjct: 23 EFDNLYLDMNGIIHPCTHPEDK-PAPK-NEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDG 80
Query: 88 VAPRAKMNQQRGRRFRSAK---EAEVLEQKAKE----KGERLPTE---KRFD 129
VAPRAKMNQQR RRFR++K EA V +Q+ +E KG LP E +RFD
Sbjct: 81 VAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFD 132
>gi|296200318|ref|XP_002747535.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Callithrix jacchus]
Length = 896
Score = 260 bits (664), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 199/342 (58%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+ +E
Sbjct: 28 FEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILA 87
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 88 KGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 138
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 139 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 198
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G ++ E E +F L L+++R+Y
Sbjct: 199 EEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREY 258
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I GA+ L +Y+
Sbjct: 259 LERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYK 314
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 315 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 356
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 463 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 522
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 523 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 582
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 583 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 632
Score = 95.5 bits (236), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 71/104 (68%), Gaps = 12/104 (11%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MNGIIH C+HP D P + E ++ IF YI+ LF +++P++L +MAIDGVAPRAKMN
Sbjct: 1 MNGIIHPCTHPEDK-PAPK-NEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMN 58
Query: 96 QQRGRRFRSAK---EAEVLEQKAKE----KGERLPTE---KRFD 129
QQR RRFR++K EA V +Q+ +E KG LP E +RFD
Sbjct: 59 QQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFD 102
>gi|296200320|ref|XP_002747536.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 4 [Callithrix jacchus]
Length = 874
Score = 260 bits (664), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 199/342 (58%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+ +E
Sbjct: 6 FEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILA 65
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 66 KGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 116
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 117 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 176
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G ++ E E +F L L+++R+Y
Sbjct: 177 EEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREY 236
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I GA+ L +Y+
Sbjct: 237 LERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYK 292
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 293 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 334
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 441 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 500
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 501 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 560
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 561 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 610
Score = 77.4 bits (189), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 10/76 (13%)
Query: 64 IFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK---EAEVLEQKAKE--- 117
IF YI+ LF +++P++L +MAIDGVAPRAKMNQQR RRFR++K EA V +Q+ +E
Sbjct: 5 IFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEIL 64
Query: 118 -KGERLPTE---KRFD 129
KG LP E +RFD
Sbjct: 65 AKGGFLPPEEIKERFD 80
>gi|338719278|ref|XP_003363975.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Equus caballus]
gi|338719280|ref|XP_003363976.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Equus caballus]
Length = 896
Score = 259 bits (663), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 199/342 (58%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+ +E
Sbjct: 28 FEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILA 87
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 88 KGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 138
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 139 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 198
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G ++ E E +F L L+++R+Y
Sbjct: 199 EEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREY 258
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I GA+ L +Y+
Sbjct: 259 LERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYK 314
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 315 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 356
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 463 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 522
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 523 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 582
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 583 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 632
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 71/104 (68%), Gaps = 12/104 (11%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MNGIIH C+HP D P + E ++ IF YI+ LF +++P++L +MAIDGVAPRAKMN
Sbjct: 1 MNGIIHPCTHPEDK-PAPK-NEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMN 58
Query: 96 QQRGRRFRSAK---EAEVLEQKAKE----KGERLPTE---KRFD 129
QQR RRFR++K EA V +Q+ +E KG LP E +RFD
Sbjct: 59 QQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFD 102
>gi|403283599|ref|XP_003933202.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 874
Score = 259 bits (663), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 199/342 (58%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+ +E
Sbjct: 6 FEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILA 65
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 66 KGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 116
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 117 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 176
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G ++ E E +F L L+++R+Y
Sbjct: 177 EEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREY 236
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I GA+ L +Y+
Sbjct: 237 LERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYK 292
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 293 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 334
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 441 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 500
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 501 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 560
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 561 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 610
Score = 77.4 bits (189), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 10/76 (13%)
Query: 64 IFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK---EAEVLEQKAKE--- 117
IF YI+ LF +++P++L +MAIDGVAPRAKMNQQR RRFR++K EA V +Q+ +E
Sbjct: 5 IFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEIL 64
Query: 118 -KGERLPTE---KRFD 129
KG LP E +RFD
Sbjct: 65 AKGGFLPPEEIKERFD 80
>gi|348518303|ref|XP_003446671.1| PREDICTED: 5'-3' exoribonuclease 2 [Oreochromis niloticus]
Length = 982
Score = 259 bits (663), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 166/469 (35%), Positives = 237/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ + PN N+ F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEEKGKECNGVRIPVD-----TTKPNPNEVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDM---NGIIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-EVLEQKAK 177
F++I F P+++ +MAIDGVAPRAKMNQQR RRFR++KE E++E+K++
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRASKEGVELVEEKSR 134
Query: 178 ------EKGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+KG LP E+ RFDSNCITPGT FM L Q LRY+V ++T D
Sbjct: 135 VREEVIQKGGYLPPEEIKERFDSNCITPGTEFMDNLAQCLRYYVAERLTNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ V LS PGEGEHKIMD+IR + +P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNIVVFLSDASVPGEGEHKIMDFIRRQRGQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTKSNKG-----GSQI--------------------VTPEETKFFLLH 323
P F+++REE K N G G +I + E +F +
Sbjct: 246 PNFTIIREEFKPNKPRPCGLCGQTGHEIKACQGMPREKQGQHDEFANTMPAAEQEFIFIR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L ++R+YL E P FPF E +DDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LCVLREYLARELTMASLP----FPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y++V+ GY+ + GY+NL+R E + + + F+++ D
Sbjct: 362 RLVGIYKDVVHKTGGYLTQNGYVNLERVEMIMQAVGVAEDNIFKKRKDD 410
Score = 159 bits (403), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 102/169 (60%), Gaps = 1/169 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WY+P HYAP+ SD K
Sbjct: 525 KQRYYKNKFDVDATDEDFRRKVVQSYVEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFK 584
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
D + +E +PF P +QL+ V PAAS LP ++NLM+ +SPI+++YP++FA D
Sbjct: 585 DIKDMFSDFEKNTKPFKPLEQLMGVFPAASGNFLPPTWRNLMSSPDSPIIDFYPDDFAID 644
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
LNGKK W+ V L+PF+DE +L A+ V LT EE+ RN G +++
Sbjct: 645 LNGKKYAWQGVALLPFVDERRLRAALADVYPDLTSEEKRRNSLGSDVLF 693
>gi|123477106|ref|XP_001321722.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121904554|gb|EAY09499.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 702
Score = 259 bits (663), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 219/691 (31%), Positives = 331/691 (47%), Gaps = 113/691 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++ YP L E ++ E + S PN N TE +
Sbjct: 1 MGVPSFFRWLKGHYPLLLSQCIETELDE-------------DPSQPNPN------TEGDV 41
Query: 61 -FQDIFHYIEILFR-MIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
F +++ + L PK NQ+ + + EV +
Sbjct: 42 EFDNLYLDMNGLIHPCYHPK----------------NQEHPKTY-----LEVFQN----- 75
Query: 119 GERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEV------- 171
EK D I P+K+ FMA+DGVAPRAKMNQQR RRF +AK++E
Sbjct: 76 -----VEKYVDRI-FNLVRPRKVLFMAVDGVAPRAKMNQQRIRRFCAAKDSEYNRYMQCQ 129
Query: 172 -LEQKAKEKGERLP--TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
L +E E + T + D+N ITPGT FM +L + + K T
Sbjct: 130 DLSITKEEIDEIMDPQTIIQSDTNTITPGTEFMMQLSDYITEMINRKQKTSP-------- 181
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
W ++ VI S PGEGEHKIM++IR + + +Y+ + HC+YGLDAD + LGL HE
Sbjct: 182 -AWSNIAVIFSDASVPGEGEHKIMEFIRSQRVEFNYDFSRHHCVYGLDADFLFLGLSCHE 240
Query: 289 PYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPF 348
+F++LREEV FN ++ + P KF + + R YLE + +P + F +
Sbjct: 241 LFFTILREEV-FNVENLTPPAGRFGP--AKFLFANGFVFRQYLERDL----KPAKMGFDW 293
Query: 349 SIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNL 408
E +DD + + GNDF+P +P ++I+ G++ ++++Y+++LP L GYI + G ++
Sbjct: 294 YFERALDDIIFLCVTAGNDFLPQIPGMNILGGSIGKIFELYKKILPELGGYITDNGNVDC 353
Query: 409 KRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATD 468
KR KFL L D E+ L+G M KE S + K
Sbjct: 354 KRAAKFLHSLV--DSEEIA--------LQGIMN---PSNLSKEASINTN-------KIYQ 393
Query: 469 DDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRD 528
+DY E+V + E +D F + YY K + + E ++D
Sbjct: 394 NDYSQ-IEKVPRPISSEITLEKPDD---------AFENLQQRYYKEKHGFDEKDVEKVKD 443
Query: 529 QAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEM---GEPFLPF 585
Y++ + W L YY +GC SWSWYYP++YAP +S + +L++ + +P P
Sbjct: 444 VCINYLKGMAWTLQYYLHGCTSWSWYYPYYYAPLLSSFELLENLDINLSVLDDSKPIPPL 503
Query: 586 QQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDE 645
+QL++VLP S LLP+ LM + SP+ +YYP F+ D+ G Q W+ + IP ID
Sbjct: 504 EQLMSVLPPQSSHLLPQNMAELMK-KGSPLEKYYPTTFSIDMMGGHQPWKGITFIPIIDG 562
Query: 646 VKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
L K + + +LTDEE RN+ G + V+
Sbjct: 563 EFLEKTLKDSKIILTDEEEKRNKTGFVKVFV 593
>gi|1060921|dbj|BAA07524.1| Dhm1 protein [Mus musculus]
Length = 947
Score = 259 bits (662), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/469 (36%), Positives = 235/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAK---EAEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR+ K EA V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRAIKGGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+ +PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNQDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFN-----TKSNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L FPF +E DDW M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFPFDVERSNDDWEFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW W YP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWLYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ ++ ++E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVLFV 686
>gi|222447124|pdb|3FQD|A Chain A, Crystal Structure Of The S. Pombe Rat1-Rai1 Complex
Length = 899
Score = 259 bits (662), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/461 (36%), Positives = 238/461 (51%), Gaps = 101/461 (21%)
Query: 2 GVPKFFRYIS---------------ERYPCLSEVVREYQIP-----EFDNLYLDMNGIIH 41
GVP FR +S E+ P +E+ + +P E DNLYLD NGI+H
Sbjct: 5 GVPALFRLLSRKFAKVITPVIEAPTEKLPDGTEIEPDLSLPNPNGVECDNLYLDXNGIVH 64
Query: 42 NCSHPNDN-DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
CSHP D P TE + +F Y + + ++P++L F+AIDGVAPRAK NQQR R
Sbjct: 65 PCSHPEDRPAPE---TEDEXXVAVFEYTDRILAXVRPRQLLFIAIDGVAPRAKXNQQRSR 121
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFRS++EA + E++ + FI
Sbjct: 122 RFRSSREAALKEEELQA------------FI----------------------------- 140
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
E +Q+ E +K +DSNCITPGTPF L + LRY++ K+ +D
Sbjct: 141 ---------EEAKQQGIPIDENATKKKSWDSNCITPGTPFXDTLAKSLRYYIINKLNSDP 191
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W++V ILS PGEGEHKI ++IR + KP+Y+PN H +YGLDADLI
Sbjct: 192 ---------CWRNVRFILSDASVPGEGEHKIXEFIRSQRVKPEYDPNTHHVVYGLDADLI 242
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNK-------GGSQIVTPEETK-------FFLLHLSL 326
LGL THEP+F +LRE+V F S K G ++ ET F L++S+
Sbjct: 243 XLGLATHEPHFRVLREDVFFQQGSTKKTKEERLGIKRLDDVSETNKVPVKKPFIWLNVSI 302
Query: 327 MRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLY 386
+R+YLE+E L P L FPF +E IDDWV F +GNDF+P+LP L I +GA+ L
Sbjct: 303 LREYLEVE---LYVPN-LPFPFDLERAIDDWVFFIFFVGNDFLPHLPSLDIRDGAVERLT 358
Query: 387 KVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFR 427
++++ LP GY+ G +NL R E L+ + + + + F+
Sbjct: 359 EIWRASLPHXGGYLTLDGSVNLARAEVILSAVGNQEDDIFK 399
Score = 179 bits (455), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 121/186 (65%), Gaps = 1/186 (0%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCV 549
++E+E T E G ++ YY K + E +R+ + Y+ + W L YYY GC
Sbjct: 578 TEENENTDTVRLYEPG-YRERYYEQKFHISPDEPEKIREAVKHYVHGLCWVLLYYYQGCP 636
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMT 609
SW+WYYP+HYAP+ +D KD + +++K+E+ +PF P++QLL VLPAASK LPE Q L T
Sbjct: 637 SWTWYYPYHYAPFAADFKDLASIDVKFELNQPFKPYEQLLGVLPAASKNNLPEKLQTLXT 696
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
ENS I+++YPE F DLNGKK +W+ V L+PFIDE +L+ A+ + LT+EE RN
Sbjct: 697 DENSEIIDFYPENFTIDLNGKKFEWQGVALLPFIDENRLLNAVSKIYPQLTEEESKRNED 756
Query: 670 GPMLVY 675
G L++
Sbjct: 757 GSTLLF 762
>gi|338719282|ref|XP_001489345.3| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Equus caballus]
Length = 874
Score = 259 bits (662), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 199/342 (58%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+ +E
Sbjct: 6 FEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILA 65
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 66 KGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 116
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 117 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 176
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G ++ E E +F L L+++R+Y
Sbjct: 177 EEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREY 236
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I GA+ L +Y+
Sbjct: 237 LERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYK 292
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 293 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 334
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 441 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 500
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 501 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 560
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 561 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 610
Score = 77.8 bits (190), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 10/76 (13%)
Query: 64 IFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK---EAEVLEQKAKE--- 117
IF YI+ LF +++P++L +MAIDGVAPRAKMNQQR RRFR++K EA V +Q+ +E
Sbjct: 5 IFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEIL 64
Query: 118 -KGERLPTE---KRFD 129
KG LP E +RFD
Sbjct: 65 AKGGFLPPEEIKERFD 80
>gi|403416696|emb|CCM03396.1| predicted protein [Fibroporia radiculosa]
Length = 1140
Score = 259 bits (662), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 165/448 (36%), Positives = 230/448 (51%), Gaps = 82/448 (18%)
Query: 2 GVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIF 61
GVP FR++S++YP + V E + + ++ + I + S PN ND F ++
Sbjct: 9 GVPALFRWLSKKYPKIILPVVEEEESKIPDVEGNEVVIPIDISRPNPNDMEF----DNLY 64
Query: 62 QDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGER 121
D+ + I+ P+ G+ +E +LE + ER
Sbjct: 65 LDMNN---IVHPCTHPE--------------------GKPAPETEEEMMLE--VFKYTER 99
Query: 122 LPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK-- 179
L + P++L FMA+DGVAPRAKMNQQR RRFRS++EA+ E+ KE
Sbjct: 100 L----------VNMVRPRRLLFMAVDGVAPRAKMNQQRSRRFRSSQEAKDKEEAHKEAIA 149
Query: 180 -----GERLPTE----KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWV 230
G+ L E K +DSN ITPGTPFM L LRY+V K+ TD
Sbjct: 150 MWEAMGKTLSEEEKNKKSWDSNAITPGTPFMDLLASSLRYWVAHKMNTDP---------G 200
Query: 231 WKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPY 290
W + VI+S PGEGEHKIM++IR +S P ++PN RH +YGLDADLIML L THEPY
Sbjct: 201 WSQLQVIISDANVPGEGEHKIMEFIRRQRSNPGHDPNTRHVIYGLDADLIMLSLATHEPY 260
Query: 291 FSLLREEVKFNTKSNKG----------GSQIVT---------PEETKFFLLHLSLMRDYL 331
F +LRE+V F S +Q PE+ + L ++++R+YL
Sbjct: 261 FRVLREDVFFQEGSRTACRICGQEGHYAAQCTGQKAEISKPPPEKKPYVFLDVAILREYL 320
Query: 332 ELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQE 391
E E P FPF++E IDDWV + F +GNDF+P+LP L I GA+ L ++++E
Sbjct: 321 EAELNLPHAP----FPFNLEQAIDDWVFLIFFVGNDFLPHLPSLEIREGAIDTLLRIWRE 376
Query: 392 VLPTLDGYINEGGYLNLKRFEKFLTKLA 419
LP + GY+ G + L R L LA
Sbjct: 377 ELPRMGGYLTNHGQVELSRAHIILEGLA 404
Score = 171 bits (433), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 113/176 (64%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E + A+ YI + W L YYY G SW WYYP+H+AP+ SD K
Sbjct: 684 YYRQKFGVEYGDVEFRKKVAKHYIEGMAWVLQYYYQGTPSWQWYYPYHFAPFASDFKTAQ 743
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
++++K++ G+PF PF+QL++V PAAS+ L+P+ + LMT E+SPI+++YP F D+NGK
Sbjct: 744 NMSIKFDPGQPFKPFEQLMSVFPAASRHLIPKVFHELMTEESSPIIDFYPSTFQIDMNGK 803
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTAL 686
K W+ V L+PFIDE +L+ AM LTDEE+ RN+ G ++Y + +L +L
Sbjct: 804 KMAWQGVALLPFIDERRLLDAMTPRYSNLTDEEKRRNKWGNNVLYVFEEHSLYPSL 859
>gi|345789898|ref|XP_003433291.1| PREDICTED: 5'-3' exoribonuclease 2 [Canis lupus familiaris]
Length = 874
Score = 259 bits (661), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 199/342 (58%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+ +E
Sbjct: 6 FEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILA 65
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 66 KGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 116
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 117 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 176
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G ++ E E +F L L+++R+Y
Sbjct: 177 EEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREY 236
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I GA+ L +Y+
Sbjct: 237 LERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYK 292
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 293 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 334
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 441 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 500
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 501 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 560
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 561 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGGDVLFV 610
Score = 77.4 bits (189), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 10/76 (13%)
Query: 64 IFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK---EAEVLEQKAKE--- 117
IF YI+ LF +++P++L +MAIDGVAPRAKMNQQR RRFR++K EA V +Q+ +E
Sbjct: 5 IFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEIL 64
Query: 118 -KGERLPTE---KRFD 129
KG LP E +RFD
Sbjct: 65 AKGGFLPPEEIKERFD 80
>gi|38569540|gb|AAR24369.1| 5'-3' exoribonuclease 2 isoform 3 [Homo sapiens]
Length = 907
Score = 259 bits (661), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 204/360 (56%), Gaps = 50/360 (13%)
Query: 110 VLEQKAKEKGERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 167
+E+K K E F++I F P++L +MAIDGVAPRAKMNQQR RRFR++K
Sbjct: 21 CVEEKTSTKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASK 80
Query: 168 E---AEVLEQKAKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKIT 217
E A V +Q+ +E KG LP E+ RFDSNCITPGT FM L + LRY++ ++
Sbjct: 81 EGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLN 140
Query: 218 TDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDA 277
D WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DA
Sbjct: 141 NDP---------GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADA 191
Query: 278 DLIMLGLCTHEPYFSLLREEVKFNTK-----SNKGGSQIVTPE----------------- 315
DLIMLGL THEP F+++REE K N N+ G ++ E
Sbjct: 192 DLIMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSL 251
Query: 316 ---ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
E +F L L+++R+YLE E L F F +E IDDWV M F +GNDF+P+L
Sbjct: 252 PCAEGEFIFLRLNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHL 307
Query: 373 PDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
P L I A+ L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 308 PSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 367
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 474 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 533
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 534 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 593
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 594 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 643
Score = 90.9 bits (224), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 77/139 (55%), Gaps = 36/139 (25%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP II NC + + E ++
Sbjct: 1 MGVPAFFRWLSRKYPS----------------------IIVNCVEEKTSTKN----EDEM 34
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK---EAEVLEQKAKE 117
IF YI+ LF +++P++L +MAIDGVAPRAKMNQQR RRFR++K EA V +Q+ +E
Sbjct: 35 MVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVRE 94
Query: 118 ----KGERLPTE---KRFD 129
KG LP E +RFD
Sbjct: 95 EILAKGGFLPPEEIKERFD 113
>gi|5881961|gb|AAD55138.1|AF064257_1 Dhm1-like protein [Homo sapiens]
Length = 950
Score = 258 bits (660), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 169/469 (36%), Positives = 235/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAK---EAEVLEQK 175
F++I F P++L +MAIDGVAPR KMNQQR RRFR+ K EA V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRVKMNQQRSRRFRAIKRGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNRPKPCGLCNQFGHEVKDCEGLSREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I A+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + ++E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMPSEFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 686
>gi|126303629|ref|XP_001373979.1| PREDICTED: 5'-3' exoribonuclease 2 [Monodelphis domestica]
Length = 947
Score = 258 bits (659), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 167/469 (35%), Positives = 238/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN N+ F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVD-----TSKPNPNEVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE + + +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMESTIEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILSKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQI--------------------VTPEETKFFLLH 323
P F+++REE K N N+ G ++ + E +F +
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCNQLGHEVKDCQGLPREKQGEHDQFEESLPASEGEFIYIR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F IE IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFTFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 153 bits (386), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 99/170 (58%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D ++ R + Y+ + W L YYY GC SW WYYP HYAP+ SD
Sbjct: 517 KQRYYKNKFDVDAADDKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFD 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G PF P +QL+ V PAAS LP ++ LM+ S I+++YPE+FA D
Sbjct: 577 GIADMPSDFEKGTRPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPESSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT +E RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPDETRRNSLGGDVMFV 686
>gi|395851967|ref|XP_003798518.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Otolemur garnettii]
Length = 908
Score = 258 bits (659), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 205/360 (56%), Gaps = 50/360 (13%)
Query: 110 VLEQKAKEKGERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 167
+E+K K E F++I F P++L +MAIDGVAPRAKMNQQR RRFR++K
Sbjct: 21 CVEEKTSPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASK 80
Query: 168 E---AEVLEQKAKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKIT 217
E A + +Q+ +E KG LP E+ RFDSNCITPGT FM L + LRY++ ++
Sbjct: 81 EGMEAALEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLN 140
Query: 218 TDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDA 277
D W+++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DA
Sbjct: 141 NDP---------GWENLTVILSDASVPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADA 191
Query: 278 DLIMLGLCTHEPYFSLLREEVKFNTK-----SNKGGSQIVTPE----------------- 315
DLIMLGL THEP F+++REE K N N+ G ++ E
Sbjct: 192 DLIMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSL 251
Query: 316 ---ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
E +F L L+++R+YLE E L F F +E IDDWV M F +GNDF+P+L
Sbjct: 252 PCAEGEFIFLRLNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHL 307
Query: 373 PDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
P L I GA+ L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 308 PSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 367
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 475 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 534
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 535 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 594
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 595 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGSDVLFV 644
Score = 89.4 bits (220), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 36/139 (25%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP II NC + + E ++
Sbjct: 1 MGVPAFFRWLSRKYP----------------------SIIVNCVEEKTSPKN----EDEM 34
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK---EAEVLEQKAKE 117
IF YI+ LF +++P++L +MAIDGVAPRAKMNQQR RRFR++K EA + +Q+ +E
Sbjct: 35 MVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAALEKQRVRE 94
Query: 118 ----KGERLPTE---KRFD 129
KG LP E +RFD
Sbjct: 95 EILAKGGFLPPEEIKERFD 113
>gi|402883353|ref|XP_003905184.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Papio anubis]
Length = 971
Score = 258 bits (659), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 198/342 (57%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+ +E
Sbjct: 103 FEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILA 162
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 163 KGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 213
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 214 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 273
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G ++ E E +F L L+++R+Y
Sbjct: 274 EEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREY 333
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I A+ L +Y+
Sbjct: 334 LERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYK 389
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 390 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 431
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 538 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 597
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 598 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 657
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 658 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 707
Score = 112 bits (281), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 79/112 (70%), Gaps = 12/112 (10%)
Query: 28 EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDG 87
EFDNLYLDMNGIIH C+HP D P + E ++ IF YI+ LF +++P++L +MAIDG
Sbjct: 68 EFDNLYLDMNGIIHPCTHPEDK-PAPK-NEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDG 125
Query: 88 VAPRAKMNQQRGRRFRSAK---EAEVLEQKAKE----KGERLPTE---KRFD 129
VAPRAKMNQQR RRFR++K EA V +Q+ +E KG LP E +RFD
Sbjct: 126 VAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFD 177
>gi|332858060|ref|XP_001145469.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 5 [Pan troglodytes]
gi|397478697|ref|XP_003810676.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Pan paniscus]
Length = 1028
Score = 258 bits (659), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 198/342 (57%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+ +E
Sbjct: 160 FEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILA 219
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 220 KGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 270
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 271 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 330
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G ++ E E +F L L+++R+Y
Sbjct: 331 EEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREY 390
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I A+ L +Y+
Sbjct: 391 LERELTMAS----LPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYK 446
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 447 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 488
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 595 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 654
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 655 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 714
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 715 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 764
Score = 112 bits (281), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 79/112 (70%), Gaps = 12/112 (10%)
Query: 28 EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDG 87
EFDNLYLDMNGIIH C+HP D P + E ++ IF YI+ LF +++P++L +MAIDG
Sbjct: 125 EFDNLYLDMNGIIHPCTHPEDK-PAPK-NEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDG 182
Query: 88 VAPRAKMNQQRGRRFRSAK---EAEVLEQKAKE----KGERLPTE---KRFD 129
VAPRAKMNQQR RRFR++K EA V +Q+ +E KG LP E +RFD
Sbjct: 183 VAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFD 234
>gi|387596301|gb|EIJ93923.1| hypothetical protein NEPG_01495 [Nematocida parisii ERTm1]
Length = 613
Score = 258 bits (659), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 181/583 (31%), Positives = 261/583 (44%), Gaps = 115/583 (19%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK L ++A+DGVAPRAKMNQQR RRFR K G E FD N ITPG
Sbjct: 72 PKHLLYIAVDGVAPRAKMNQQRERRFRP---------KDVSDGH---VEGGFDPNTITPG 119
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
TPFM RLH + +++ + + + WK + VI SG + PGEGEHK+ D++R
Sbjct: 120 TPFMYRLHCAIIRYIEQR--------QSAGINGWKQLAVIYSGCDVPGEGEHKVYDFVRS 171
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
+K +RH + GLDADLI L L THE F +LRE+V F K + ++ E
Sbjct: 172 IKGT-----GVRHAICGLDADLIFLSLATHEKSFKVLREDVFFLEKEERSTCKLCKKEGH 226
Query: 318 K-----------FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGN 366
+ L + ++R YL +F ++ F E I+DDW+ + F +GN
Sbjct: 227 STGNCNPNTFPPYIYLDIDIIRRYLYTDFST-----AINARFDFERILDDWIFVCFFVGN 281
Query: 367 DFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF 426
DF+P++P + I A+ + L T Y+ E +N+ + L + +
Sbjct: 282 DFLPSIPSMDIKVAAIETITTSCINNLLTRRQYLTEDSKINIAELSVLMDTLGETEEKLL 341
Query: 427 REKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEE 486
R K LA +K + EE L YEE
Sbjct: 342 RAK------------------------------LAGYVKNAKRRGEAPREEDLKVKLYEE 371
Query: 487 YYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYN 546
+ + +YY K+ +A ++ E Y+R + W L YYY
Sbjct: 372 -------------------KGRLEYYSSKI-HANSPEDITNVCVE-YLRGLSWILQYYYK 410
Query: 547 GCVSWSWYYPHHYAPYISDIKD----FSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPE 602
GC SW+WYYP H+AP DI D HL+ + G P +Q++AVLP +S +PE
Sbjct: 411 GCPSWNWYYPLHFAPLAQDIADTLKKMPHLSFDFSKGAARKPLEQVMAVLPPSSASSIPE 470
Query: 603 PYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDE 662
L + N + E YP+E D+ GK Q W+ V L+PF D KL+ + L +
Sbjct: 471 ---GLYPIFNE-MPENYPDEVKIDMFGKTQAWQGVALLPFFDCDKLVSLVREHSRNLPLD 526
Query: 663 ERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLY 705
E RN G L+ + P N+N+A + LY
Sbjct: 527 EIYRNVEGCDLL---------------FLPTANKNYATAETLY 554
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 74/103 (71%), Gaps = 5/103 (4%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FR+I++RYP + + E DNLYLD+NGIIH C HP + +P +E+++
Sbjct: 1 MGVPSLFRWIAKRYP---KSINAASGQEVDNLYLDLNGIIHPCCHPRNREPPG--SEEEM 55
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFR 103
F++IF ++ L +++PK L ++A+DGVAPRAKMNQQR RRFR
Sbjct: 56 FREIFKTVDHLVSIVRPKHLLYIAVDGVAPRAKMNQQRERRFR 98
>gi|388857586|emb|CCF48735.1| related to dna exoribonuclease Dhp1p [Ustilago hordei]
Length = 1245
Score = 258 bits (658), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 174/500 (34%), Positives = 251/500 (50%), Gaps = 102/500 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ-----IPEFDNLYLDMNGIIHNCSHPNDNDPHFRI 55
MGVP FR++S++YP + V+E P+ + L ++ S PN N F
Sbjct: 1 MGVPALFRWLSKKYPRIVTSVQEQDPKTAPGPDGSEIVLPLD-----TSTPNPNGEEF-- 53
Query: 56 TEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA 115
++ ++G+ G+ ++E ++E A
Sbjct: 54 -----------------------DCLYLDMNGIV--HPCTHPEGKPAPESEEEMMIEVFA 88
Query: 116 KEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQK 175
TE+ + + P++L MAIDGVAPRAKMNQQR RRFR+AKEA Q+
Sbjct: 89 Y-------TERVVNMVR-----PRRLLMMAIDGVAPRAKMNQQRSRRFRAAKEAREKHQE 136
Query: 176 -----AKEKGERLP-------TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWK 223
A+ K + LP ++K +DSN ITPGTPFM L LRY+V KI TD
Sbjct: 137 NESALAEWKAKGLPITDHALQSKKAWDSNAITPGTPFMDLLAASLRYWVAQKINTDP--- 193
Query: 224 DTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLG 283
WKDV VI+S PGEGEHKIM++IR +S P+++PN +H +YGLDADLIML
Sbjct: 194 ------GWKDVQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIYGLDADLIMLS 247
Query: 284 LCTHEPYFSLLREEVKFN----------------------TKSNKGGSQI----VTPEET 317
L THEPYF +LRE+V + + NK G P++
Sbjct: 248 LATHEPYFKVLREDVFASDNKPKTCNICGQPGHFAASCKGSPKNKSGEHDEKAQTPPDKK 307
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F L L +R+YL++E + L F F +E IDDWV + F +GNDF+P+LP L I
Sbjct: 308 PFIFLDLPTLREYLQVELNIPQ----LPFAFDLERAIDDWVFLIFFVGNDFLPHLPSLEI 363
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
+GA+ L +++++ LP++ GY+ G + L R + L LAS + + FR + D E
Sbjct: 364 RDGAIDTLLRIWKKELPSMGGYLTNHGKVELSRAQLILNGLASEEDDIFRRRKEDEDRRE 423
Query: 438 GKMGKKFSDVFHKEKSKEMD 457
KK + + + KE+D
Sbjct: 424 NN--KKRREAIQQRREKELD 441
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 103/164 (62%)
Query: 507 HKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI 566
++ YY K + R + YI + W L YYY G SW WYYP H++P+ +D
Sbjct: 650 YRERYYREKFGVDLSDTDFRRQVVKSYIEGLSWVLAYYYQGVPSWQWYYPFHFSPFAADF 709
Query: 567 KDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+D + L++K+E+G PF PF+QL+ VLPA S+ +PEP+ LMT +S I+++YP EF D
Sbjct: 710 EDLASLDIKFELGAPFKPFEQLMGVLPADSRASIPEPFHPLMTESDSEIIDFYPSEFEID 769
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
+NGKK W+ V L+PFIDE +L+ A+ LL+++E RN G
Sbjct: 770 MNGKKMAWQGVALLPFIDEKRLLDALKDKYPLLSEDEVRRNGFG 813
>gi|339237353|ref|XP_003380231.1| 5'-3' exoribonuclease 1 [Trichinella spiralis]
gi|316976968|gb|EFV60153.1| 5'-3' exoribonuclease 1 [Trichinella spiralis]
Length = 614
Score = 258 bits (658), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 175/279 (62%), Gaps = 25/279 (8%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+ F+A+DGVAPRAKMNQQR RRF SAKEAE KA GE +P FDSNCITPG
Sbjct: 65 PRKVLFIAVDGVAPRAKMNQQRSRRFMSAKEAEDSRLKAIRNGEVIPDSDPFDSNCITPG 124
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RLH L+YF+ LK+++D L W++V V SGH+ PGEGEHKI+ +IR+
Sbjct: 125 TEFMERLHIHLKYFINLKLSSDPL---------WQNVDVYYSGHDCPGEGEHKILAFIRF 175
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
M+S+ DY+ N HC+YGLDADLI LG+ HEPYFS+LREEV ++++S K + ++
Sbjct: 176 MRSQADYDSNTTHCIYGLDADLIFLGMAMHEPYFSILREEVVYDSRSKKRYIKCDDDDDN 235
Query: 318 KFFLLHLSLMRDYLELEFGKLKE---PGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPD 374
L Y + +G+ E P V + E IIDDW+ M F IGNDFIPN+P
Sbjct: 236 NNLLRFA-----YGQFAYGRRSEQVKPDV----YDEEKIIDDWIFMSFFIGNDFIPNVPM 286
Query: 375 LHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEK 413
L ALP ++ YQ P +D G+L KR ++
Sbjct: 287 LITNENALPNVWLAYQNAFPNMDA----CGWLESKRAQR 321
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 91/129 (70%), Gaps = 12/129 (9%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP+FFR++SERYP LS++V E QIP +DNLYLD NGIIHNCSHPN D FR TE
Sbjct: 1 MGVPRFFRWLSERYPGLSQLVVESQIPSYDNLYLDFNGIIHNCSHPNSPDATFRCTEG-- 58
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
LF++I+P+K+ F+A+DGVAPRAKMNQQR RRF SAKEAE KA GE
Sbjct: 59 ----------LFQLIKPRKVLFIAVDGVAPRAKMNQQRSRRFMSAKEAEDSRLKAIRNGE 108
Query: 121 RLPTEKRFD 129
+P FD
Sbjct: 109 VIPDSDPFD 117
Score = 140 bits (354), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 99/155 (63%), Gaps = 9/155 (5%)
Query: 554 YYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENS 613
+Y HYAP++SD+ DF+ + +E+GEPFLPFQQLLAVLP +S++LLPEPYQ+LM +S
Sbjct: 452 FYGFHYAPFVSDLCDFNVGEITFELGEPFLPFQQLLAVLPPSSRKLLPEPYQDLMVNPDS 511
Query: 614 PILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPML 673
P+ YPE+ D+NGKK +WE ++ +PFIDE L A+ L D+E+ RNR G
Sbjct: 512 PLSYAYPEDVERDMNGKKYEWECILKLPFIDEEILFDAVYPFNDALKDDEKRRNRFGKCY 571
Query: 674 VYTYSN-------VNLGTALAPDYFPAINENHAVE 701
+Y YS ++L PD FP I EN E
Sbjct: 572 LYRYSGSHGERRTTTFRSSL-PDIFPDI-ENCTCE 604
>gi|194380934|dbj|BAG64035.1| unnamed protein product [Homo sapiens]
Length = 896
Score = 258 bits (658), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 198/342 (57%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+ +E
Sbjct: 28 FEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILA 87
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 88 KGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 138
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 139 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 198
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G ++ E E +F L L+++R+Y
Sbjct: 199 EEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREY 258
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I A+ L +Y+
Sbjct: 259 LERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYK 314
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 315 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 356
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 463 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 522
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 523 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 582
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 583 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 632
Score = 95.5 bits (236), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 71/104 (68%), Gaps = 12/104 (11%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MNGIIH C+HP D P + E ++ IF YI+ LF +++P++L +MAIDGVAPRAKMN
Sbjct: 1 MNGIIHPCTHPEDK-PAPK-NEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMN 58
Query: 96 QQRGRRFRSAK---EAEVLEQKAKE----KGERLPTE---KRFD 129
QQR RRFR++K EA V +Q+ +E KG LP E +RFD
Sbjct: 59 QQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFD 102
>gi|332238206|ref|XP_003268294.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Nomascus leucogenys]
Length = 896
Score = 257 bits (657), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 198/342 (57%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+ +E
Sbjct: 28 FEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILA 87
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 88 KGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 138
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 139 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 198
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G ++ E E +F L L+++R+Y
Sbjct: 199 EEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREY 258
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I A+ L +Y+
Sbjct: 259 LERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYK 314
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 315 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 356
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 463 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 522
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 523 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 582
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 583 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 632
Score = 95.5 bits (236), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 71/104 (68%), Gaps = 12/104 (11%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MNGIIH C+HP D P + E ++ IF YI+ LF +++P++L +MAIDGVAPRAKMN
Sbjct: 1 MNGIIHPCTHPEDK-PAPK-NEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMN 58
Query: 96 QQRGRRFRSAK---EAEVLEQKAKE----KGERLPTE---KRFD 129
QQR RRFR++K EA V +Q+ +E KG LP E +RFD
Sbjct: 59 QQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFD 102
>gi|238593916|ref|XP_002393329.1| hypothetical protein MPER_06950 [Moniliophthora perniciosa FA553]
gi|215460659|gb|EEB94259.1| hypothetical protein MPER_06950 [Moniliophthora perniciosa FA553]
Length = 332
Score = 257 bits (657), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 188/326 (57%), Gaps = 48/326 (14%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAE-----------VLEQKAKEKGERLPTE 186
P+KL FMAIDGVAPRAKMNQQR RRFR+A+EA+ + E+ K E +
Sbjct: 4 PRKLLFMAIDGVAPRAKMNQQRSRRFRAAQEAKEKEEARLESVRLWEEMGKTISEDEKNK 63
Query: 187 KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGE 246
K +DSN ITPGTPFM L LRY+V K+ +D WK++ VI+S PGE
Sbjct: 64 KAWDSNAITPGTPFMTLLAASLRYWVVQKMNSDP---------GWKNLQVIISDASVPGE 114
Query: 247 GEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNK 306
GEHKIMDYIR ++ P ++PN RH +YGLDADLIML L THEPYF +LRE+V F+ SN
Sbjct: 115 GEHKIMDYIRRQRTNPGHDPNTRHVIYGLDADLIMLALATHEPYFRVLREDV-FSDSSNM 173
Query: 307 -----------GGSQIVTPEETK------------FFLLHLSLMRDYLELEFGKLKEPGV 343
TP E + F L +S++R+YLE E + P
Sbjct: 174 ACRMCGQEGHYAAQCTATPAEVQERAKKKVTERKPFIFLDVSILREYLEAELNVPQTP-- 231
Query: 344 LSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEG 403
FPF++E IDDWVL+ F +GN F+P+LP L I GA+ L ++++ LP + GY+
Sbjct: 232 --FPFNLEQAIDDWVLLIFFVGNAFLPHLPSLEIREGAIDTLLRIWKMELPRMGGYLTNH 289
Query: 404 GYLNLKRFEKFLTKLASFDFEQFREK 429
G L L R + L LA + + F+ +
Sbjct: 290 GRLELARAQIILEGLAKREDDIFKRR 315
>gi|332858058|ref|XP_001145394.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 4 [Pan troglodytes]
gi|397478695|ref|XP_003810675.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Pan paniscus]
Length = 874
Score = 257 bits (656), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 198/342 (57%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+ +E
Sbjct: 6 FEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILA 65
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 66 KGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 116
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 117 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 176
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G ++ E E +F L L+++R+Y
Sbjct: 177 EEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREY 236
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I A+ L +Y+
Sbjct: 237 LERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYK 292
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 293 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 334
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 441 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 500
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 501 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 560
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 561 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 610
Score = 77.4 bits (189), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 10/76 (13%)
Query: 64 IFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK---EAEVLEQKAKE--- 117
IF YI+ LF +++P++L +MAIDGVAPRAKMNQQR RRFR++K EA V +Q+ +E
Sbjct: 5 IFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEIL 64
Query: 118 -KGERLPTE---KRFD 129
KG LP E +RFD
Sbjct: 65 AKGGFLPPEEIKERFD 80
>gi|194382024|dbj|BAG64381.1| unnamed protein product [Homo sapiens]
Length = 874
Score = 257 bits (656), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 198/342 (57%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+ +E
Sbjct: 6 FEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILA 65
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 66 KGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 116
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 117 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 176
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G ++ E E +F L L+++R+Y
Sbjct: 177 EEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREY 236
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I A+ L +Y+
Sbjct: 237 LERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYK 292
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 293 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 334
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 441 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 500
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 501 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 560
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 561 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 610
Score = 77.4 bits (189), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 10/76 (13%)
Query: 64 IFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK---EAEVLEQKAKE--- 117
IF YI+ LF +++P++L +MAIDGVAPRAKMNQQR RRFR++K EA V +Q+ +E
Sbjct: 5 IFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEIL 64
Query: 118 -KGERLPTE---KRFD 129
KG LP E +RFD
Sbjct: 65 AKGGFLPPEEIKERFD 80
>gi|332238208|ref|XP_003268295.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Nomascus leucogenys]
Length = 874
Score = 257 bits (656), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 198/342 (57%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+ +E
Sbjct: 6 FEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILA 65
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 66 KGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 116
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 117 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 176
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G ++ E E +F L L+++R+Y
Sbjct: 177 EEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREY 236
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I A+ L +Y+
Sbjct: 237 LERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYK 292
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 293 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 334
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 441 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 500
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 501 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 560
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 561 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 610
Score = 77.4 bits (189), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 10/76 (13%)
Query: 64 IFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK---EAEVLEQKAKE--- 117
IF YI+ LF +++P++L +MAIDGVAPRAKMNQQR RRFR++K EA V +Q+ +E
Sbjct: 5 IFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEIL 64
Query: 118 -KGERLPTE---KRFD 129
KG LP E +RFD
Sbjct: 65 AKGGFLPPEEIKERFD 80
>gi|290978067|ref|XP_002671758.1| predicted protein [Naegleria gruberi]
gi|284085329|gb|EFC39014.1| predicted protein [Naegleria gruberi]
Length = 1261
Score = 257 bits (656), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/296 (47%), Positives = 189/296 (63%), Gaps = 12/296 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT-EKRFDSNCITP 196
P K FF+A+DGVAPRAKMNQQR RRFR + + L +K ++KGE++P + FDSNCITP
Sbjct: 76 PSKHFFLALDGVAPRAKMNQQRSRRFRKVFDEQQLRKKLEQKGEKVPERDNLFDSNCITP 135
Query: 197 GTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIR 256
GT FM +L L+YF+ K+ TD W+ VILSGHE PGEGEHKIM++IR
Sbjct: 136 GTEFMAKLSMHLKYFIHSKMQTD---------IKWQQCKVILSGHEVPGEGEHKIMNFIR 186
Query: 257 YMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVT-PE 315
K + Y PN RHCLYGLDADLI LGL THEP+F LLRE+V ++N + P
Sbjct: 187 GRKMEAGYQPNERHCLYGLDADLICLGLVTHEPHFMLLREDVFEQYRNNDSKEKSSNKPF 246
Query: 316 ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
KF LLHL +R YL+ EF + LSF + +E IIDD+V F GNDF+P++P L
Sbjct: 247 AEKFHLLHLCALRQYLDFEFRQALLEQKLSFEYDLERIIDDFVFFIFFTGNDFLPHMPTL 306
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYA 431
I G++ + +Y+++LP GY+ E G ++L+R + F+ LAS + ++Y
Sbjct: 307 DIKEGSINTMIDIYKQILPK-SGYLTELGDVHLERVQDFVRALASQESSMMEQRYT 361
Score = 154 bits (388), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 95/123 (77%), Gaps = 1/123 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP+ F+++SERYPC++ + E IP DNLYLDMNGIIHNC+H D++ ++TEK++
Sbjct: 1 MGVPRLFKWLSERYPCIASSLTEATIPTVDNLYLDMNGIIHNCTH-KDDELKAQLTEKEM 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
IF YI+ LF++I+P K FF+A+DGVAPRAKMNQQR RRFR + + L +K ++KGE
Sbjct: 60 ILKIFRYIDQLFQLIKPSKHFFLALDGVAPRAKMNQQRSRRFRKVFDEQQLRKKLEQKGE 119
Query: 121 RLP 123
++P
Sbjct: 120 KVP 122
Score = 74.3 bits (181), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 127/584 (21%), Positives = 235/584 (40%), Gaps = 113/584 (19%)
Query: 720 LCQDVNL-KLYVTHFPTL--KHVQFTHKIENAKVKVFQQPSRNESIII-----------V 765
LC V + K + FP L K Q K + + +F PS+ S++I +
Sbjct: 513 LCDGVKIGKHNLEGFPVLDCKTTQVEEK--DVGIALFGHPSKKPSLVINMNPQYSRDQMM 570
Query: 766 QDKVQVPSLKQVADQI---LGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVF--ER 820
D+ + + A + +GK ++I YP+ + ++A D R S+ +NS P + ER
Sbjct: 571 DDEFVIEESVKAAQGLSKYIGKKVYIGYPYPRLGILSSIA--DERASYFENSEPEYHNER 628
Query: 821 AAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFI 880
A+ + + K + Y G+DIGN +VL++ + + K R K +++F
Sbjct: 629 DAEMFRKEYSYHKNVLLRRY----GLDIGNVKVLLFVKLFKGMK-----RDKFGIKKSFH 679
Query: 881 RSTVTYAYQSAVL--NLQQARESLEYKT----IDEIFYPGCQCFALSNPHYGSGGCVIST 934
R Y + VL + + +S +T +++ + L + Y S G V
Sbjct: 680 RDEFAYPHSLIVLPDDYEPTPDSKFAETGPQAVEKEYPVNSTVLVLGDQSYASLGKVAGY 739
Query: 935 VKEENSFIKLSFKV-----QQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFT 989
K+ F+K+S P + + Y+P + + +L ++ L
Sbjct: 740 DKK---FLKVSLTTPYSDQTPRPKFPKEA-VTEFAAEKYVPLHIASKRLGLTKKALGLLI 795
Query: 990 GSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRD---------------------- 1027
GSI + S + N+GL ++ + ++ +VG+ + D
Sbjct: 796 GSIRLELSNTKLTP--NVGLGLRSKKSSKRIVGYCKCDFNEQNLDDSYFLNFDGGSLFTK 853
Query: 1028 ---------ETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVF------ 1072
T W +++ +TLI N+ + FP+ L+ DI R ++F
Sbjct: 854 PLSNKFSVGGTFGDWELSDKAMTLIGNFCQAFPDFVAKLE----QDIPFRCELFFPNTLK 909
Query: 1073 -PHQGEQ----RVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQI 1127
H+ ++ +VA+I W+ EQ V+ + IE A K Q
Sbjct: 910 DNHEKDKYYQTKVAEITKWIDEQGFRSLPFVDIEQDVLPVSALKAIEEAAIEFSKQPAQT 969
Query: 1128 ----TLFVKPNKLYIPKPTLDKLCPDP--DTKFKLFDRVVNIRDCYTVPLGYRGTIIGIV 1181
++ + P +++ KP + CP+ F L RV+ + + G GT++GI
Sbjct: 970 PALQSIVIDP--VFVHKP--EDPCPNLFYIADFALGHRVMQMSGSGSARFGLVGTLVGI- 1024
Query: 1182 QGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINL 1223
G+ V+FD+ F G R S +RG + ++++NL
Sbjct: 1025 DGDNG-----QVIFDEEFVGGSTFGSRLSTARGAIVSLRSLVNL 1063
>gi|402883355|ref|XP_003905185.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Papio anubis]
Length = 874
Score = 257 bits (656), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 198/342 (57%), Gaps = 50/342 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE---- 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+ +E
Sbjct: 6 FEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILA 65
Query: 179 KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++
Sbjct: 66 KGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLT 116
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 117 VILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIR 176
Query: 296 EEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLHLSLMRDY 330
EE K N N+ G ++ E E +F L L+++R+Y
Sbjct: 177 EEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREY 236
Query: 331 LELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQ 390
LE E L F F +E IDDWV M F +GNDF+P+LP L I A+ L +Y+
Sbjct: 237 LERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYK 292
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 293 NVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 334
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 441 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 500
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 501 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 560
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 561 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 610
Score = 77.4 bits (189), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 10/76 (13%)
Query: 64 IFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK---EAEVLEQKAKE--- 117
IF YI+ LF +++P++L +MAIDGVAPRAKMNQQR RRFR++K EA V +Q+ +E
Sbjct: 5 IFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEIL 64
Query: 118 -KGERLPTE---KRFD 129
KG LP E +RFD
Sbjct: 65 AKGGFLPPEEIKERFD 80
>gi|410078313|ref|XP_003956738.1| hypothetical protein KAFR_0C06110 [Kazachstania africana CBS 2517]
gi|372463322|emb|CCF57603.1| hypothetical protein KAFR_0C06110 [Kazachstania africana CBS 2517]
Length = 1039
Score = 256 bits (655), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 134/321 (41%), Positives = 195/321 (60%), Gaps = 35/321 (10%)
Query: 132 TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK-------GE--- 181
L P+K+ MA+DGVAPRAKMNQQR RRFRSA++A++ + +E+ GE
Sbjct: 87 VLNMARPRKVLLMAVDGVAPRAKMNQQRARRFRSARDAQIANEAREEELRERENYGEIID 146
Query: 182 -RLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
L +K +DSN ITPGTPFM +L LRY+ K+ TD WK++ VI+S
Sbjct: 147 DALKKKKTWDSNAITPGTPFMDKLAAALRYWTAFKLATDP---------GWKNLQVIISD 197
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV-- 298
PGEGEHKIM++IR ++ P+YNPN HC+YGLDADLI LGL THEP+F +LRE+V
Sbjct: 198 ATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFLGLATHEPHFKILREDVFA 257
Query: 299 -------KFNTKSNKGGSQIVTPEETK--FFLLHLSLMRDYLELEFGKLKEPGVLSFPFS 349
F+ ++ +++ ++ + F LH+S++R+YL E + LSF F
Sbjct: 258 QDNRKRTTFSDNMSEEEKELIMKKDAEKPFLWLHISVLREYLAAELWIPR----LSFNFD 313
Query: 350 IENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLK 409
+E IDDWV M F GNDF+P+LP L + ++ +L +++ +LP+L Y+ G+LNL+
Sbjct: 314 LERAIDDWVFMCFFCGNDFLPHLPSLDVRENSIDILLDIWKVILPSLKTYMTCDGFLNLE 373
Query: 410 RFEKFLTKLASFDFEQFREKY 430
E L +L + + F+ +Y
Sbjct: 374 SVEILLKQLGDREPDIFKTRY 394
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 117/177 (66%), Gaps = 2/177 (1%)
Query: 507 HKTDYYHYKLDYAKVTNEVLR-DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISD 565
++ YY K +K E++R D Y+ + W L YYY GC SW+WYYP HYAP+ SD
Sbjct: 614 YRERYYTEKFHISKDEIEIVRRDMVRSYVEGVSWVLRYYYQGCASWNWYYPFHYAPFASD 673
Query: 566 IKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFAT 625
D + +++++GEPFLP++QL++VLPAAS LP ++ LM+ +SPI+++YP EF
Sbjct: 674 FFDIKDIKVEFDLGEPFLPYEQLMSVLPAASGHTLPPIFRPLMSEADSPIIDFYPPEFPI 733
Query: 626 DLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN-RHGPMLVYTYSNVN 681
D+NGKK W+ + L+PFIDE +L++ + A L+D ERSRN R +L+ + NVN
Sbjct: 734 DMNGKKMSWQGIALLPFIDEKRLLEVVRAQYPKLSDAERSRNVRKEAILLISNKNVN 790
Score = 118 bits (296), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 80/128 (62%), Gaps = 20/128 (15%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY-------QIP----------EFDNLYLDMNGIIHN 42
MGVP FFR++S +YP + V+ EY +P E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIICPVLEEYPQVVDGVALPIDYASPNPNGELDNLYLDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
CSHP + P TE ++ +F Y + M +P+K+ MA+DGVAPRAKMNQQR RRF
Sbjct: 61 CSHPENKPPP--ETEDEMLLAVFEYTNRVLNMARPRKVLLMAVDGVAPRAKMNQQRARRF 118
Query: 103 RSAKEAEV 110
RSA++A++
Sbjct: 119 RSARDAQI 126
>gi|327270678|ref|XP_003220116.1| PREDICTED: 5'-3' exoribonuclease 2-like [Anolis carolinensis]
Length = 957
Score = 256 bits (655), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 165/469 (35%), Positives = 233/469 (49%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN N+ F
Sbjct: 1 MGVPAFFRWLSRKYPSIIVSCTEEKPKECNGVKIPVD-----TSKPNPNEVEF------- 48
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+ E K K E
Sbjct: 49 ------------------DNLYLDMNGII----------------HPCTHPEDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-EVLEQKAK 177
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE E E+K +
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGVEGAEEKQR 134
Query: 178 ------EKGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
KG LP E+ RFDSNCITPGT FM L + LRY+V ++ D
Sbjct: 135 IREEIMRKGGFLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYVADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTKSNKG-----GSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N G G ++ + E +F +
Sbjct: 246 PNFTIIREEFKPNKPKPCGLCGQFGHEVKECQGLPKEKQGEHDQFADSPPGMEQEFIFIR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L ++++YLE E L F F +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LCVLKEYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTENGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 120/231 (51%), Gaps = 19/231 (8%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQA-ECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI 566
K YY K D V ++ R + + Y+ + W L YYY GC SW WYYP HYAP+ SD
Sbjct: 518 KQRYYKNKFD-VDVNDKKFRHKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDF 576
Query: 567 KDFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFAT 625
+ + + +E G +PF P +QL+ V PAAS LP ++ LMT S I+++YPE+FA
Sbjct: 577 EGIADMFSDFEKGTKPFKPLEQLMGVFPAASGNFLPVTWRKLMTDPESSIIDFYPEDFAI 636
Query: 626 DLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTA 685
DLNGKK W+ V L+PF+DE +L A+ V LT EE+ RN G +++ + L
Sbjct: 637 DLNGKKYAWQGVALLPFVDERRLRAALAEVYPDLTPEEKRRNSLGGDVLFVGKHHPLHDF 696
Query: 686 LAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTL 736
+ Y +E AV P LC + KL + P L
Sbjct: 697 ILEQY--KSDEKQAVGMP--------------PELCHGIQGKLTLNENPVL 731
>gi|328854884|gb|EGG04014.1| hypothetical protein MELLADRAFT_28527 [Melampsora larici-populina
98AG31]
Length = 206
Score = 256 bits (654), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 134/272 (49%), Positives = 164/272 (60%), Gaps = 70/272 (25%)
Query: 30 DNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVA 89
DNLYLDMNGIIHNCSHPN+ D H FR+ + + F+AI G
Sbjct: 1 DNLYLDMNGIIHNCSHPNEEDAH-------------------FRITEEQ--IFLAIFGY- 38
Query: 90 PRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGV 149
E F + P+KLFFMA+DGV
Sbjct: 39 ----------------------------------LEHLFALVK-----PQKLFFMAVDGV 59
Query: 150 APRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLR 209
APRAKMNQQR RRFR+AK+ + + KA+ KGE LP+ + FDSNCITPGTPFM RL +QL+
Sbjct: 60 APRAKMNQQRSRRFRTAKDRKDMIDKAERKGETLPSTEAFDSNCITPGTPFMARLSEQLK 119
Query: 210 YFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMR 269
YF+ K++TD W+ V V+ SGH+ PGEGEHKIM+YIR K++PDYNPN+R
Sbjct: 120 YFINQKVSTDS---------AWQGVQVVFSGHDVPGEGEHKIMEYIRLAKAQPDYNPNVR 170
Query: 270 HCLYGLDADLIMLGLCTHEPYFSLLREEVKFN 301
HCLYGLDADLIML L +H+P+F LLREEVKF
Sbjct: 171 HCLYGLDADLIMLALLSHDPHFCLLREEVKFG 202
>gi|300120088|emb|CBK19642.2| unnamed protein product [Blastocystis hominis]
Length = 574
Score = 256 bits (654), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 179/641 (27%), Positives = 298/641 (46%), Gaps = 146/641 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPE---------------------FDNLYLDMNGI 39
MG+P + R++ +YP + + + + P FDN Y+DMNGI
Sbjct: 1 MGIPTYTRWLCRKYPLILKSLSDPDSPAQRDGNTSSQQQQQQQQQQPPVFDNFYIDMNGI 60
Query: 40 IHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
IH+C+H R T+ + +++ +Y++ L + P+KL FM++DGVAP+AK+ +QRG
Sbjct: 61 IHDCAHGQILGSTPRNTD-DVLENLQNYLDRLITAVNPRKLLFMSVDGVAPKAKVKEQRG 119
Query: 100 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQR 159
RRFRS E+ ++Q L + + + I F FP +
Sbjct: 120 RRFRSGYESVEIKQ--------LEEQLKKEMIAEGFQFPPDVEEE--------------- 156
Query: 160 GRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFV-KLKITT 218
E+ F+S I PGT FM L L Y+V K +
Sbjct: 157 -------------------------EEESFNSLNIFPGTDFMSELQVFLDYYVTKTLQSN 191
Query: 219 DKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDAD 278
+KL +++ V++S + PGEGEHKIM++IR +++PDY PN H ++GLDAD
Sbjct: 192 EKL----------QNLNVLISDSDVPGEGEHKIMEFIRSQRTQPDYLPNQTHIIHGLDAD 241
Query: 279 LIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPE--------------ETKFF---- 320
L ML L +HEP F +L E++ + G T E + KF+
Sbjct: 242 LSMLALSSHEPLFYILVEQLFITRCAICGAPDHSTRECVKLPRKKLGASTKDDKFYHRPL 301
Query: 321 -LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN 379
++ + +RDYL+LE + + P+++E IIDD+V + +GNDF+P+LP I
Sbjct: 302 QVISIKTLRDYLDLEMRPVASQ--MKIPYNLERIIDDYVFLCIFVGNDFLPSLPLFDIRE 359
Query: 380 GALPLLYKVYQEVLPTLDGY-INEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEG 438
GA+ +L +Y+ +LPT Y I GG +N + + + ++ + + R K +Y G
Sbjct: 360 GAVTMLLNLYRRLLPTWTDYIIRPGGEINYLQVQSLMREVYANEGNILRRKRLFGRYTVG 419
Query: 439 KMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYA--NYEEYYYSDEDEEW 496
++ + + S P+L G EE ++Y + + YY
Sbjct: 420 RLKRP-----AVQASSTKPPEL-------------GDEESVDYGKPGWSDAYYR------ 455
Query: 497 RTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYP 556
+FG +D ++ +V E Y+ + W + YY GC SW W+YP
Sbjct: 456 -----QKFGLDPSD----RVSIERVCQE--------YMLGLAWIMRYYCTGCASWDWFYP 498
Query: 557 HHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASK 597
HYAP + D+ +++ + + +G+P + ++AV A S+
Sbjct: 499 EHYAPLLRDLSAMNNVTVSFSLGQPISKLEAVIAVGFACSE 539
>gi|147899710|ref|NP_001091411.1| 5'-3' exoribonuclease 2 [Xenopus laevis]
gi|126631948|gb|AAI33744.1| LOC100049102 protein [Xenopus laevis]
Length = 457
Score = 255 bits (652), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 167/473 (35%), Positives = 237/473 (50%), Gaps = 96/473 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E +N+ + ++ + PN N+ F
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEQKPKECNNIKIPVDT-----TKPNPNEVEF------- 48
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+ E K K E
Sbjct: 49 ------------------DNLYLDMNGII----------------HPCTHPEDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-EVLEQKAK 177
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE E +E+K +
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGVESVEEKNR 134
Query: 178 ------EKGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 IREEVLSKGGYLPKEEMKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P ++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASVPGEGEHKIMDYIRRQRAQPHHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTKSNKG-----GSQI----VTPEETK----------------FFLLH 323
PYF+++REE K N G G +I P E K F +
Sbjct: 246 PYFTIIREEFKPNQPRPCGLCGQFGHEIKECQGMPREKKGEHDEFAGAPPGCEQEFIFIR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F E +DDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNILREYLEKELTM----ASLPFEFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL 436
L +Y+ V+ GY+ E G++NL+R + + + + F+++ D ++
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGFVNLERVQMIMLAVGEVEDNIFKKRKEDDEHF 414
>gi|156097196|ref|XP_001614631.1| exoribonuclease [Plasmodium vivax Sal-1]
gi|148803505|gb|EDL44904.1| exoribonuclease, putative [Plasmodium vivax]
Length = 1353
Score = 255 bits (652), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 174/576 (30%), Positives = 260/576 (45%), Gaps = 185/576 (32%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE---------------------------------YQIP 27
MGVP F+R++ RYP +++ E Y++P
Sbjct: 1 MGVPTFYRWLVTRYPKIAKATYETRDSDVYARRTKIRDGHRDGHRDGHRDGEGKATYRVP 60
Query: 28 E--------------------FDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHY 67
+ FDNLYLDMNGIIH CSH +DN + E +IF +IF Y
Sbjct: 61 DLSDYVNNTDETHCSDNINGYFDNLYLDMNGIIHLCSH-SDNSKRAKSNE-EIFLNIFLY 118
Query: 68 IEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKR 127
IE LF +I+PKKL +MAIDGVAP+AKMNQQR RRF+S +E+ + E+ +E R
Sbjct: 119 IERLFDIIEPKKLLYMAIDGVAPKAKMNQQRSRRFKSILCSEIERNAYIQLREKFLSENR 178
Query: 128 FDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEK 187
P++ F
Sbjct: 179 --------VVPEEFTF-------------------------------------------- 186
Query: 188 RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEG 247
+DSN ITPGT FM L L+YFV+ KIT D+ WK+ + ++ +VC GEG
Sbjct: 187 -WDSNIITPGTQFMYELSVALKYFVEHKITNDEKWKNIVVIFSDANVC---------GEG 236
Query: 248 EHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTK---- 303
EHKI ++I+ +++P Y+PN RH ++G+DADLIML L +HEPYF +LRE + ++K
Sbjct: 237 EHKIFNFIKSQRAQPGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIIILDSKGEEK 296
Query: 304 -----------------------------------------SNKGGSQIVTPEETKFFLL 322
S I + + +L
Sbjct: 297 VQNKDFVGMLKSKQDLPLCTTHMRKTKRMYTKYNDPHYANISRSHNCLINSENWNELQIL 356
Query: 323 HLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGAL 382
L+++R+YL +F +++E IDD++ + FL GNDF+P+LP + I G++
Sbjct: 357 DLTILREYLSKDF-------FFDSTYNLERCIDDFIFICFLCGNDFLPHLPSISIAAGSI 409
Query: 383 PLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGK 442
L +YQ+VLP L Y+ G +NLK F K+++ +A + E F +Y
Sbjct: 410 DQLVLLYQKVLPVLGDYLINEGKINLKPFSKYVSFIAEVERETFISQY------------ 457
Query: 443 KFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEV 478
D K + ++ D +K TD+ +DG+ +
Sbjct: 458 ---DFKKKREKRDQQKDSLKRVKCTDEQ-NDGSGNI 489
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 104/174 (59%), Gaps = 5/174 (2%)
Query: 514 YKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLN 573
+ LD ++ +++ YI + W L YY+ C W WYYP++YAP SD+ ++N
Sbjct: 708 FHLDETDYVDDFVKEVVYKYIEGLAWVLSYYFQSCPMWHWYYPYYYAPLSSDLI-IDNVN 766
Query: 574 LKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQD 633
++ EP LP +QLL VLP+ S LP+ Y+ LM +SPI+++YP+ F + NGKK
Sbjct: 767 FTFQKDEPILPLEQLLCVLPSNSSHCLPKGYRELMVRHDSPIIDFYPKTFKEEENGKKYK 826
Query: 634 WEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALA 687
++ V+L+PF+D+ ++IK + LT+EE+ RNR G +Y +N AL+
Sbjct: 827 YQWVILLPFVDKERIIKHARELNDTLTEEEKKRNRRGMNKIY----MNCSHALS 876
>gi|332021133|gb|EGI61520.1| 5'-3' exoribonuclease 2-like protein [Acromyrmex echinatior]
Length = 867
Score = 254 bits (649), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 166/460 (36%), Positives = 237/460 (51%), Gaps = 88/460 (19%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E ++ D + + +N + PN N F +
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKVVSADGVCIPVNS-----AEPNPNGVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P+ D AP+ E E++E E +
Sbjct: 52 YLDMNG---IIHPCTHPE-------DKPAPK--------------DEDEMMEA-IFECID 86
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-------EVLE 173
RL + P+KL +MAIDGVAPRAKMNQQR RRFR+AKE+ E +
Sbjct: 87 RL----------FRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKESTEKINEIERIR 136
Query: 174 QKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLW 229
+ KG LP EK FDSNCITPGTPFM RL L Y++ ++ D
Sbjct: 137 SELTLKGASLPPEKSKEEHFDSNCITPGTPFMARLSSCLHYYIHDRLNNDP--------- 187
Query: 230 VWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEP 289
W+++ VILS PGEGEHKIMD+IR +++PD++PN +H L G DADLIMLGL THEP
Sbjct: 188 GWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIMLGLATHEP 247
Query: 290 YFSLLREEVKFN--------------TKSNKGGSQIVTPE------ETKFFLLHLSLMRD 329
F+++REE K N + G PE E +F + L+++R+
Sbjct: 248 NFTIIREEFKPNKPKPCDICGQLGHEMRECTGAEPNQKPEENTYGSECQFIFVRLNVLRE 307
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YLE E L P L F + E +DDWV M F +GNDF+P+LP L I GA+ L +Y
Sbjct: 308 YLERE---LHMPN-LPFKYDFERAVDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVALY 363
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
+ + G++ + G +NL R + +++L + E F+++
Sbjct: 364 KRAVYKTGGFLTDSGDVNLDRVQLIMSELGDAEDEIFKKR 403
Score = 157 bits (397), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 8/187 (4%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
DE W F K YY K D + + A Y+R + W L YYY GC S
Sbjct: 514 DEVRLWEDGF-------KDRYYESKFDVSPDNLAFRNNVALQYVRGLCWVLRYYYQGCAS 566
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGE-PFLPFQQLLAVLPAASKELLPEPYQNLMT 609
W WY+P+HYAP+ SD + L+ ++E G PF P +QL+ V PAAS++ +P+P+ LMT
Sbjct: 567 WRWYFPYHYAPFASDFINIGGLSTEFEKGTVPFRPLEQLMGVFPAASRKHVPKPWAKLMT 626
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
S I+++YPE+F DLNGKK W+ V L+PF+DE +L KA+ LT+ E+ RN
Sbjct: 627 DPKSQIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALAPYYDSLTEAEKMRNVR 686
Query: 670 GPMLVYT 676
G +Y
Sbjct: 687 GDDRLYV 693
>gi|429962361|gb|ELA41905.1| hypothetical protein VICG_01089 [Vittaforma corneae ATCC 50505]
Length = 630
Score = 254 bits (649), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 196/678 (28%), Positives = 301/678 (44%), Gaps = 117/678 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP +++I++RYP + + DNLYLD N IIH C N + T+ ++
Sbjct: 1 MGVPSLYKWITQRYPEVKLKPNREEDHLTDNLYLDFNAIIHPCC--NKALENMADTDTEL 58
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++++ Y++ + I+P++L ++++DGVAPRAK+NQQR RRF A+E E+G
Sbjct: 59 YKNLEKYMDEVIARIRPRRLLYISVDGVAPRAKLNQQRSRRFVHARE-------VSEQG- 110
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+F G P R +E E
Sbjct: 111 -------------------NFYFKDDCGNEP-----AHHSRLTVLDQEIENSAVSKNMSD 146
Query: 181 ERLPTE-KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILS 239
E P FD+N I+PGT FM RL L+ + K++ D+ W VI S
Sbjct: 147 EATPNGCGVFDTNAISPGTEFMQRLDAFLQELISFKMSFDQR---------WTGFNVIYS 197
Query: 240 GHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK 299
+ PGEGE KIM+YIR + NP ++ DADLI LGL + +LREE
Sbjct: 198 SYRVPGEGEQKIMEYIRKHQ-----NPKFSSVIFSPDADLIFLGLSLFDHSVMVLREEPP 252
Query: 300 FNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVL 359
+ SN S E F L+ + ++ + +F V+ PF+ ++DW+
Sbjct: 253 KHGNSNGSLSN-----EKDFVLVDIPRLKHLIIRDFKY-----VMKMPFNHRKFLEDWIF 302
Query: 360 MGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
+ F +GNDF+P P I AL L + Q V +I + G +N +F + A
Sbjct: 303 LCFTVGNDFLPCTPCFEIRTDALDKLTHILQTVYLNTRSFITDNGKINYDVLREFFIECA 362
Query: 420 SFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVL 479
+ EK ++ + +M + D +EE
Sbjct: 363 RRENTFIVEKRNNLVNVRQRMNLPY----------------------------DPSEE-- 392
Query: 480 NYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEV-LRDQAECYIRAIQ 538
FF E + K +Y K+ +T+E L E YI+ ++
Sbjct: 393 --------------------FFLETERGKIRFYVEKMG---ITSEKDLLIACEEYIKGLE 429
Query: 539 WNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKE 598
W +YY+ SW WYYP+H+AP+++D+ + K+ G P P +QLL VLP +SK+
Sbjct: 430 WVYNYYFYDMPSWEWYYPYHFAPFMTDLALVKDVKFKFTTGRPLKPLEQLLTVLPPSSKD 489
Query: 599 LLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHL 658
LLP ++ EYYP EF D+ K DW+AV ++PFI+ LIKA + ++
Sbjct: 490 LLPSCLHSVF----DEFKEYYPTEFKLDMFQKCMDWQAVPILPFINVQDLIKAFENRQNE 545
Query: 659 LTDEERSRNRHGPMLVYT 676
L E RN G + Y+
Sbjct: 546 LKFSECERNITGYPIFYS 563
>gi|367024791|ref|XP_003661680.1| hypothetical protein MYCTH_92876 [Myceliophthora thermophila ATCC
42464]
gi|347008948|gb|AEO56435.1| hypothetical protein MYCTH_92876 [Myceliophthora thermophila ATCC
42464]
Length = 1055
Score = 254 bits (648), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 177/302 (58%), Gaps = 77/302 (25%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MNGIIHNC+H + +D H FR+ + + F+AI
Sbjct: 1 MNGIIHNCTHKDSDDVH-------------------FRLTEEE--MFIAI---------- 29
Query: 96 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRA 153
F++I F PKKLFFMA+DGVAPRA
Sbjct: 30 --------------------------------FNYIEHLFSKIKPKKLFFMAVDGVAPRA 57
Query: 154 KMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVK 213
KMNQQR RRFR+A +AE +KA +G+ LP E+ FDSNCITPGT FM +L QQL+YF+
Sbjct: 58 KMNQQRARRFRTALDAEKAREKAIREGKELPKEEPFDSNCITPGTEFMAKLSQQLKYFIN 117
Query: 214 LKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLY 273
K++ D+ W+ ++LSGHE PGEGEHKIM+YIR +++PDY+PN+RHCLY
Sbjct: 118 KKVSEDR---------AWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQPDYSPNVRHCLY 168
Query: 274 GLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLEL 333
GLDADLIMLGL +H+P+F LLREEV F ++ ++ E F+LLHL ++R+YLEL
Sbjct: 169 GLDADLIMLGLLSHDPHFCLLREEVTFGRQAKHKSKEL---EHQNFYLLHLCIVREYLEL 225
Query: 334 EF 335
++
Sbjct: 226 DW 227
Score = 162 bits (410), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 153/529 (28%), Positives = 244/529 (46%), Gaps = 55/529 (10%)
Query: 750 VKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRIS 809
V VFQQ SRNES+++ + + + + A LG+ F+ YP L E ++ V D
Sbjct: 377 VNVFQQDSRNESMVVSLLETDLRTNVESAKVKLGQRCFVGYPFLQEAKI--VKVSDELFD 434
Query: 810 F---DKNSGPVFER--AAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRK 864
+ D SG + R A +++++ + + + I + Y +LG+ IG E LV ++
Sbjct: 435 YTLADDGSGRIVTRNHAPREIEEWTKKADR-IENFYSKRLGILIGPVESLVSVHMLKG-- 491
Query: 865 YFFGPRGKVTQQRTFIRSTVT-YAYQSAVLNLQQARESLEYKT---IDEIFYPGCQCFAL 920
G ++ I T YA Q V + E K ++E F F L
Sbjct: 492 LIKTDEGATVKEYGEIPGMETEYASQIIVDEVVNEDERFIEKAALPVEEEFPVQSTGFFL 551
Query: 921 SNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSI 980
+YG V + + S I L+ ++EP+ + + +YLPSY VA +L +
Sbjct: 552 GEYNYGQPLEVAGHSRGKLS-IWLAVLERREPEFAKKIIHDAQRGMHYLPSYMVAKQLDL 610
Query: 981 SPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVV 1040
PL LS+ T S +I G R N+GLN+KF + ++V+G++R+ ET W ++ V
Sbjct: 611 HPLTLSKITSSYYI---RTVGDLRVNLGLNLKFDARKQKVLGYSRKSETG--WEFSPAAV 665
Query: 1041 TLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVF--PHQGEQRVAQIVSWLKEQPHAKAEVR 1098
LI YM +FP+ F +K + S D++ P RV +I +WLK + E
Sbjct: 666 HLIVEYMTRFPDFFAGVKRNPSGAELKETDLWGDPTVASARVKEIGAWLKTLKTSSMERV 725
Query: 1099 PCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKL-YIPKPTL----DKLCPDPDTK 1153
P A +D+ VV + D + T+F +P K+ +P+ L D + +
Sbjct: 726 PLDAEQLDSDVVMRLATEADRLQLS----TIFSRPKKMNGVPRNALMRPEDAEHRLGNQR 781
Query: 1154 FKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESR 1211
F L DRVV + VP+G+RGT++GI T+ + DVVFD F G + RC R
Sbjct: 782 FSLGDRVVYVARTGKVPIGFRGTVVGISHTPTA--KLLDVVFDVTFMSGNTLGGRCPPFR 839
Query: 1212 GYRMPAQAMINLSYGERLCGNSNPHVKNINVMQSRGERNTNYAQVTRQP 1260
G +P+ ++NLS + + G+ AQV RQP
Sbjct: 840 GQTVPSTTLLNLSNHQVVAGSK--------------------AQVARQP 868
>gi|405969602|gb|EKC34564.1| 5'-3' exoribonuclease 2 [Crassostrea gigas]
Length = 954
Score = 253 bits (646), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 170/473 (35%), Positives = 240/473 (50%), Gaps = 110/473 (23%)
Query: 1 MGVPKFFRYISERYP-----CLSEVVREYQIPEFDNLYLDMNG--IIHNCSHPNDNDPHF 53
MGVP FFR++S + P C+ E RE +NG I + S PN ND F
Sbjct: 1 MGVPAFFRWLSRKNPSILVHCIEEKPRE------------VNGVKIPVDTSQPNPNDYEF 48
Query: 54 RITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQ 113
++ D+ I+ P+ D AP+ + E +L
Sbjct: 49 ----DNLYLDMNG---IIHPCCHPE-------DKPAPK------------NEDEMMILI- 81
Query: 114 KAKEKGERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-E 170
F++I F P+K+ +MAIDGVAPRAKMNQQR RRFR++KE E
Sbjct: 82 --------------FEYIDRIFSIVRPRKVLYMAIDGVAPRAKMNQQRSRRFRASKETKE 127
Query: 171 VLEQKAK------EKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
+E+ ++ KG LP EK FDSNCITPGTPFM RL LRY++ ++ D
Sbjct: 128 KIEEMSRLRDELTTKGFNLPPEKEKGEHFDSNCITPGTPFMFRLADCLRYYIHERLNNDP 187
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W+++ +ILS PGEGEHKIMDYIR +++PD++PN +HCL G DADL+
Sbjct: 188 ---------GWQNIKIILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTKHCLCGADADLL 238
Query: 281 MLGLCTHEPYFSLLREEVKFNTK-----SNKGGSQI-------------------VTPEE 316
MLGL THEP+F+++REE K N + G ++ V E
Sbjct: 239 MLGLATHEPHFTIIREEFKPNQPRPCDLCGQLGHEMKECMGLPKEMCGENDELPKVMGAE 298
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
+F + L+++R+YLE E P F + E IDDWV M F +GNDF+P+LP L
Sbjct: 299 QEFIFIRLNILREYLERELLMDNLP----FKYDFERAIDDWVFMCFFVGNDFLPHLPSLE 354
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I GA+ L K+Y+ + GY+ G +NL+R + ++ L + E F+ +
Sbjct: 355 IREGAIDRLVKLYKSCVRRTGGYLTNSGVVNLERVQVVMSDLGEVEDEIFKRR 407
Score = 156 bits (395), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 98/164 (59%), Gaps = 1/164 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K E + A Y+R + W L YYY GC SW WY+P+HYAP+ SD
Sbjct: 553 KDRYYSSKFGVDGSDQEFRQTVANHYVRGLCWVLRYYYQGCASWKWYFPYHYAPFASDFV 612
Query: 568 DFSHLNLKYEMGE-PFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ L+ +E PF P +QL+ V PAASK+ LP +Q LM SPI+++YP +F D
Sbjct: 613 NIGQLSNSFEKQTVPFRPLEQLMGVFPAASKKHLPVTWQRLMCDPESPIIDFYPIDFKID 672
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
LNGKK W+ V L+PF+DE +L+ A++ V LTD ER RN G
Sbjct: 673 LNGKKYAWQGVALLPFVDEKRLLSALEKVYPDLTDAERERNTWG 716
>gi|410916005|ref|XP_003971477.1| PREDICTED: 5'-3' exoribonuclease 2-like [Takifugu rubripes]
Length = 992
Score = 253 bits (646), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 163/469 (34%), Positives = 236/469 (50%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ + PN N+ F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEEKGKECNGVRIPVD-----TTRPNPNEVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E KA K E
Sbjct: 52 YLDM---NGIIHPCTHP----------------------------------EDKAAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE-AEVLEQKAK 177
F++I F P+++ +MAIDGVAPRAKMNQQR RRFR++KE AE++E K +
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRASKEGAELVEDKKR 134
Query: 178 ------EKGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
++G LP E+ RFDSNCITPGT FM L + LRY++ ++ +
Sbjct: 135 IREEVIQRGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNNP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
W++V V LS PGEGEHKIMD+IR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWRNVTVFLSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFN--------------------TKSNKGG-----SQIVTPEETKFFLLH 323
P F+++REE K N T K G + + E +F +
Sbjct: 246 PNFTIIREEFKPNKPRPCALCGQLGHDIKDCQGTAREKQGEHDEFADSMPVSEQEFIFIR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L ++R+YL E L FPF E +DDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LCVLREYLARELTM----ASLPFPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y++V+ GY+ E GY+ L+R E + + + F+++ D
Sbjct: 362 RLVGIYKDVVHKTGGYLTENGYVKLERVELIMQAVGVAEDNIFKKRKED 410
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 102/169 (60%), Gaps = 1/169 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + + + + Y+ + W L YYY GC SW WY+P HYAP+ SD K
Sbjct: 530 KQRYYKNKFDVDVMDEDFRKKVVQSYVEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFK 589
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
D + +E +PF P +QL++V PAAS LPE ++NLM+ +S I+++YP++FA D
Sbjct: 590 DIKGMFTDFEKDTKPFQPLEQLMSVFPAASGNFLPETWRNLMSSPDSSIIDFYPDDFAID 649
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
LNGKK W+ V L+PF+DE +L A+ V LT EE RN G ++
Sbjct: 650 LNGKKYAWQGVALLPFVDERRLRAALADVYPDLTPEEVKRNSLGSDFIF 698
>gi|429327281|gb|AFZ79041.1| 5'-3' exoribonuclease 2, putative [Babesia equi]
Length = 1356
Score = 253 bits (645), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 206/743 (27%), Positives = 335/743 (45%), Gaps = 136/743 (18%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAE----VLEQKAKEKG-ERLPT--EKRFD 190
P KL ++A+DGVAP AK+NQQR RRFR++ E E V+ + G E P E +FD
Sbjct: 106 PNKLLYLAVDGVAPTAKINQQRERRFRASAEMENQILVMNSIDIQNGVEEKPNTDEYKFD 165
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
ITPGTPFM RL L++F + I +K WK++ V++SG + PGEGEHK
Sbjct: 166 PLQITPGTPFMERLTLHLQFFAQKMIAENK---------SWKNLQVVVSGSDVPGEGEHK 216
Query: 251 IMDYIRYMKSKPDYNPN-----------MRHCLYGLDADLIMLGLCTHEPYFSLLREEVK 299
IM+YIR K++ + N HC+YGLDADLI+L L THEP+ LLRE V
Sbjct: 217 IMEYIRNDKARRHFEANNSSEDVKECKYTSHCIYGLDADLIILSLITHEPFVCLLRERVM 276
Query: 300 FNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVL 359
F N +++ + + LLH+ ++R+Y+ + ++ P + ++ ++DD+VL
Sbjct: 277 FGQMKNSTKMRMMI-NMSNYVLLHIGILREYILNDL--IENPKLRKDVKIMDRVVDDFVL 333
Query: 360 MGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEG---------------G 404
+ +GNDF+P+L +I G L + +Y+ GYI E G
Sbjct: 334 ITLFVGNDFLPHLLLANIPEGGLDAVLGIYK-------GYITESIKSKPLDSIWLTCDCG 386
Query: 405 YLNLKRFEKFLTKLASFDFEQFREKY-ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAAL 463
+N F F+T+ A ++ + K A+ GK+ K V + K ++ DL +
Sbjct: 387 EINFDNFLSFITRWAKYETNCIQNKLLAEPAKKNGKVEKSTITVVNNANLK-IETDLTEM 445
Query: 464 IKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNF-FSEFGQHKTDYYHYKLDYAKVT 522
+ + D + V EW++ + F++ G +D + V+
Sbjct: 446 ----NTRFPDEPKTV---------------NEWKSRYYFAKLGI--SDQIGDGTLFKSVS 484
Query: 523 NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSH----------- 571
V Y IQW L+YYY SWSW Y P++ D+ F
Sbjct: 485 TLV-----SGYFVGIQWILYYYYRSVPSWSWSLSFKYPPFVHDMLLFLKNARVEYIRKQR 539
Query: 572 ------------LNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYY 619
+++K+++ P P +QL+ +LP + LLP+ +M SP+ YY
Sbjct: 540 HNMSMYSTLSQVMDMKFDISSPITPLEQLMMILPPKASYLLPDVLGKIMNDPKSPLSRYY 599
Query: 620 PEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAM------------------DAVEH---- 657
+ D++ W + L+P + L++ M D + H
Sbjct: 600 LTKIEVDMDNTNVKWGGIALLPAVPHGPLLEIMNRNILDERTYPNFENLVNDGILHYMES 659
Query: 658 -LLTDEERSRNRHGPMLVYTYSNVNLGTALAPD--YFPAINENHAVEKPLYRDDI---YV 711
LT++E+ RN+ G +Y+Y N N L +F ++ + KP + + +
Sbjct: 660 PYLTEDEKERNKFGLARIYSY-NANSSKKLVSSLKFFDDLDSCNVECKPFFNPALKKGHT 718
Query: 712 HPNK-LRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESI-IIVQDKV 769
PNK L G V+ FP+L + +T + V VF SR+ S+ + V ++
Sbjct: 719 FPNKLLLTGDEYKVSQIPKNLWFPSLSILPYT-TVYKRGVDVFNYKSRHPSLYLTVFQQL 777
Query: 770 QVPSLKQVADQILGKTIFINYPH 792
+K + I + + YP+
Sbjct: 778 NAEGVKNLQSAIRSNIVAVGYPY 800
Score = 113 bits (283), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 79/138 (57%), Gaps = 29/138 (21%)
Query: 1 MGVPKFFRYISERYPCLSE----------------------------VVREYQIPE-FDN 31
MG+P FFR+++ERYP + E + + PE FDN
Sbjct: 1 MGIPSFFRWLAERYPLICESQIGSASDKVDTFKLLRSTEANNETYDGLYNGFVAPEGFDN 60
Query: 32 LYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPR 91
LYLD+NGIIHNCSH + N +E+ IF IFH I + +++P KL ++A+DGVAP
Sbjct: 61 LYLDVNGIIHNCSHSDANLCQNIHSEEDIFVSIFHCITNIVNIVRPNKLLYLAVDGVAPT 120
Query: 92 AKMNQQRGRRFRSAKEAE 109
AK+NQQR RRFR++ E E
Sbjct: 121 AKINQQRERRFRASAEME 138
Score = 54.3 bits (129), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 108/245 (44%), Gaps = 27/245 (11%)
Query: 994 IIDSTEEGAKRHNIGLNIKFSRKNEE----VVGFTRRDET-------TKKWFYTEQVVTL 1042
I S G + +IG+N+ +E+ + G+TR ++ + Y++Q V L
Sbjct: 1073 IFQSLTVGKYKQDIGMNLVSWDYDEKCPLSLPGYTRISDSMDNEIDLVRMVLYSKQCVRL 1132
Query: 1043 IKNYMKQFPEVFGFLKDHSSDDI--YLRDDVFP----HQGEQRVAQIVSWLKEQPHAKAE 1096
++ Y +FPE+F FL+ +D + + V+P Q E ++ I + + QP + +
Sbjct: 1133 VEEYYNRFPELFSFLEVVELNDKRHIVLNQVYPDLNEEQLEFKLRSIEKFGESQPFKRLK 1192
Query: 1097 VRPCGAAVVDAKVVSLIEHAVDTCEK---VEKQITLFVKPN---KLYIPKPTLDKLCPDP 1150
+ + + V I D +K + K+ FV+ L+IP DP
Sbjct: 1193 LVKGRYSCLSEDRVEKICEMYDDAQKDKNLCKEYCKFVRVQHLRNLHIPAYNTQIPNQDP 1252
Query: 1151 DTKFKLFDRVVNIRDCYTVPLGYRGTIIGI-VQGETSYDAMYDVVFDKPFPHGVKI--RC 1207
F L VV I T+PLG +GTI+G+ + + + +V+ + P + RC
Sbjct: 1253 ADLF-LGQSVVYINHNETIPLGTKGTIVGVYTEDNNRSNTIIEVILESPIVSATDLFGRC 1311
Query: 1208 SESRG 1212
+ RG
Sbjct: 1312 RKMRG 1316
>gi|340714666|ref|XP_003395847.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Bombus terrestris]
Length = 946
Score = 252 bits (644), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/351 (40%), Positives = 200/351 (56%), Gaps = 46/351 (13%)
Query: 112 EQKAKEKGERLPTEKRFDFI--TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA 169
E K K E E F+ I + P+KL +MAIDGVAPRAKMNQQR RRFR++KE
Sbjct: 66 EDKPAPKNEEEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKET 125
Query: 170 -------EVLEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITT 218
+ + + KG LP EK FDSNCITPGTPFM RL + L Y++ ++
Sbjct: 126 IEKVNEIKRIRSELILKGVSLPPEKPKEDHFDSNCITPGTPFMARLSKCLHYYIHDRLNN 185
Query: 219 DKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDAD 278
D W+++ VILS PGEGEHKIMD+IR +++PD++PN +H L G DAD
Sbjct: 186 DP---------GWRNIKVILSDANVPGEGEHKIMDFIRKQRAQPDHDPNTQHVLCGADAD 236
Query: 279 LIMLGLCTHEPYFSLLREEVKFN--------------------TKSNKGGSQIVTPEETK 318
LIMLGL THEP F+++REE K N ++N+G E +
Sbjct: 237 LIMLGLATHEPNFTIIREEFKPNKPKPCDICGQLGHEMQDCTGAEANQGDETDTFGSECQ 296
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
+ + L+++R+YLE E L+ P L F + E +IDDWV M F +GNDF+P+LP L I
Sbjct: 297 YIFVRLNVLREYLERE---LQMPN-LPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIR 352
Query: 379 NGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
GA+ L +Y++ + G++ + G +NL R + +++L + E F+ +
Sbjct: 353 EGAIDRLVNLYKKAVYKTGGFLTDSGDVNLDRVQLIMSELGEVEDEIFKRR 403
Score = 160 bits (405), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 116/211 (54%), Gaps = 13/211 (6%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
DE W F K YY K D + + A Y+R + W L YYY GC S
Sbjct: 509 DEVRLWEDGF-------KDRYYESKFDVSPDNLAFRNNVALQYVRGLCWVLRYYYQGCAS 561
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGE-PFLPFQQLLAVLPAASKELLPEPYQNLMT 609
W WY+P+HYAP+ SD + L+ ++E G PF P +QL+ V PAAS + +P P+ LM
Sbjct: 562 WKWYFPYHYAPFASDFINIGGLSTEFEKGTTPFRPLEQLMGVFPAASSKHIPAPWAKLMI 621
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
SPI+++YPE+F DLNGKK W+ + L+PF+DE +L KA++ LT+ E+ RN
Sbjct: 622 DPRSPIIDFYPEDFKIDLNGKKFAWQGIALLPFVDEKRLFKALEPYYDCLTEAEKKRNVE 681
Query: 670 GPMLVYTYSNVNLGTALAPDYFPAINENHAV 700
G +Y V LG + ++ + NH +
Sbjct: 682 GDNRLY----VGLGNS-GYNFIKGLYTNHVL 707
Score = 121 bits (303), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 93/152 (61%), Gaps = 28/152 (18%)
Query: 1 MGVPKFFRYISERYP-----CLSE---VVREYQIP-----------EFDNLYLDMNGIIH 41
MGVP FFR++S +YP C+ + ++P EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVECIEQKPITTNGVRVPVNSVDPNPNGIEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP D P + E+++ + IF I+ LFR+++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEDK-PAPK-NEEEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEA-------EVLEQKAKEKGERLPTEK 126
FR++KE + + + KG LP EK
Sbjct: 119 FRASKETIEKVNEIKRIRSELILKGVSLPPEK 150
>gi|307183882|gb|EFN70493.1| 5'-3' exoribonuclease 2-like protein [Camponotus floridanus]
Length = 630
Score = 252 bits (643), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 163/460 (35%), Positives = 236/460 (51%), Gaps = 88/460 (19%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + D + + +N + PN N F +
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKTISADGVCIPVNS-----ADPNPNGVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P+ D AP+ E E++E E +
Sbjct: 52 YLDMNG---IIHPCTHPE-------DKPAPK--------------DEDEMME-AIFECID 86
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-------EVLE 173
RL + P+KL +MAIDGVAPRAKMNQQR RRFR++KE + +
Sbjct: 87 RL----------FRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETTEKINEIQRIR 136
Query: 174 QKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLW 229
+ KG LP EK FDSNCITPGTPFM RL L Y++ ++ D
Sbjct: 137 SELANKGAPLPPEKPKEEHFDSNCITPGTPFMARLSACLHYYIHERLNKDP--------- 187
Query: 230 VWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEP 289
W+++ VILS PGEGEHKIMD+IR +S+PD++PN +H L G DADLIMLGL THEP
Sbjct: 188 GWRNIKVILSDANVPGEGEHKIMDFIRRQRSQPDHDPNTQHVLCGADADLIMLGLATHEP 247
Query: 290 YFSLLREEVKFN--------------------TKSNKGGSQIVTPEETKFFLLHLSLMRD 329
F+++REE K N + N+G + E ++ + L+++R+
Sbjct: 248 NFTIIREEFKPNKPKPCDICGQLGHEMRECTGAEPNQGQEENAFGSECQYIFVRLNILRE 307
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YLE E L P L F + E +DDWV M F +GNDF+P+LP L I GA+ L +Y
Sbjct: 308 YLERE---LYMPN-LPFKYDFERAVDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVALY 363
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
++ + G++ + G +NL R + ++ L + E F+++
Sbjct: 364 KKAVYKTGGFLTDSGDVNLDRVQLIMSDLGDVEDEIFKKR 403
Score = 97.8 bits (242), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
DE W F K YY K D + + A Y+R + W L YYY GC S
Sbjct: 510 DEVRLWEDGF-------KDRYYESKFDVSPDNLAFRNNVALQYVRGLCWVLRYYYQGCAS 562
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGE-PFLPFQQLLAVLPAASKELLPEPYQNLMT 609
W WY+P+HYAP+ SD + L+ ++E PF P +QL+ V PAASK+ +P P+ LMT
Sbjct: 563 WRWYFPYHYAPFASDFINIGGLSTEFEKDTVPFRPLEQLMGVFPAASKKHVPAPWAKLMT 622
>gi|341882472|gb|EGT38407.1| hypothetical protein CAEBREN_28761, partial [Caenorhabditis
brenneri]
Length = 274
Score = 251 bits (642), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 148/207 (71%), Gaps = 14/207 (6%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+FFMA+DGVAPRAKMNQQR RRF SA+ A+ KA EKGE +PTEKRFDSNCITPG
Sbjct: 77 PQKVFFMAVDGVAPRAKMNQQRARRFMSARTAQTQLDKAIEKGEVIPTEKRFDSNCITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM RLH QL ++K K +D W+ +ILSGH PGEGEHKIMDYIR
Sbjct: 137 TYFMTRLHDQLDEWIKKKSESDSHWQGRK---------IILSGHNVPGEGEHKIMDYIRT 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
++K DY+PN RHC+YGLDADLIMLG+ +HEP+FSLLREEV FNT+ K + P+ T
Sbjct: 188 ERAKSDYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLREEVTFNTRPRKNEQKNKKPKRT 247
Query: 318 K-----FFLLHLSLMRDYLELEFGKLK 339
F LLHLSL+R+YL EF +K
Sbjct: 248 DSDVKTFHLLHLSLLREYLAWEFADVK 274
Score = 208 bits (529), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/145 (67%), Positives = 115/145 (79%), Gaps = 4/145 (2%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ SERYPCLSEV+ E QIPEFDNLYLDMNGIIHNCSHPND+D FRITE++I
Sbjct: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEEEI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F +IF YIE L+ +I+P+K+FFMA+DGVAPRAKMNQQR RRF SA+ A+ KA EKGE
Sbjct: 61 FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFMSARTAQTQLDKAIEKGE 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMA 145
+PTEKRFD C +FM
Sbjct: 121 VIPTEKRFD----SNCITPGTYFMT 141
>gi|361125661|gb|EHK97694.1| putative 5'-3' exoribonuclease 2 [Glarea lozoyensis 74030]
Length = 1008
Score = 251 bits (642), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/464 (33%), Positives = 227/464 (48%), Gaps = 95/464 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FR++S++YP ++V Q E D + + ++ PN N F
Sbjct: 1 MGVPALFRWLSQKYP---KIVSGEQPREIDGVQIPVD-----TRGPNPNGEEF------- 45
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+ + R K++ E
Sbjct: 46 ------------------DNLYLDMNGIVHPCSHPEDR--------------PPPKDEEE 73
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+ ++ + P+KL +AIDGVAPRAKMNQQR RRFRSA+EA+ E E
Sbjct: 74 MMLEIFKYTDRVVNMVRPRKLLLIAIDGVAPRAKMNQQRSRRFRSAQEAKEKEADKAELA 133
Query: 181 ERLPTE----------KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWV 230
+ L ++ K FDSN ITPGTPFM L LRY++ LK+ TD
Sbjct: 134 KMLKSQGGRTEDAAVKKAFDSNEITPGTPFMDILASSLRYWIALKLNTDP---------A 184
Query: 231 WKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPY 290
W + VI+S PGEGEHKIM++IR +S PD++PN RH +YGLDADLIMLGL THEP+
Sbjct: 185 WAKMKVIISDSTVPGEGEHKIMEFIRSQRSSPDHDPNTRHVIYGLDADLIMLGLATHEPH 244
Query: 291 FSLLREEV-------------------------KFNTKSNKGGSQIVTPEETKFFLLHLS 325
F +LRE+V + K + P F LH+S
Sbjct: 245 FRVLREDVFAQDSKPRTCHMCGQAGHEARECTGQAKVKDGDFDEKDSAPALKPFIWLHVS 304
Query: 326 LMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLL 385
++R+YLE E +P F F +E +DDWV M F +GNDF+P+LP L I + L
Sbjct: 305 ILREYLEAELYVPSQP----FRFDLERALDDWVFMCFFVGNDFLPHLPSLEIRENGIDTL 360
Query: 386 YKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
++++ +P + GY+ + G+++L+R + L LA + FR +
Sbjct: 361 IAIWRDNIPFMGGYLTKDGHVDLERAQLILEGLAKQEDAIFRRR 404
Score = 152 bits (383), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 94/157 (59%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K D E A Y+ + W L YY+ GC SW WYYP+HYAP+ +D D
Sbjct: 580 YYSQKFDVHPSDIEFRHKVARAYVEGLAWVLLYYFQGCPSWDWYYPYHYAPFAADFVDLK 639
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ + + G F P++QL+ VLPAAS++ +P + LMT +S I+++YPE+F DLNGK
Sbjct: 640 DMTISFNKGRIFRPYEQLMGVLPAASRQAIPPAFHELMTNPDSEIIDFYPEDFVVDLNGK 699
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
K W+ V L+PFID +L++AM V L + +RN
Sbjct: 700 KFAWQGVALLPFIDSERLLQAMAKVYPTLAPDVAARN 736
>gi|380025877|ref|XP_003696690.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Apis florea]
Length = 948
Score = 251 bits (640), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 166/463 (35%), Positives = 240/463 (51%), Gaps = 94/463 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIH--NCSHPNDNDPHFRITE 57
MGVP FFR++S +YP + E + + I NGI N + PN N F
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKPI--------TTNGIRVPVNSAEPNPNGIEF---- 48
Query: 58 KQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 117
++ D+ I+ P+ D AP+ E E++E E
Sbjct: 49 DNLYLDM---NGIIHPCTHPE-------DRPAPQ--------------NEDEMME-AIFE 83
Query: 118 KGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-------E 170
+RL + P+KL +MAIDGVAPRAKMNQQR RRFR++KEA +
Sbjct: 84 CIDRL----------FRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKEASEKINEIK 133
Query: 171 VLEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTL 226
+ + KG LP EK FDSNCITPGTPFM RL + L Y++ ++ D
Sbjct: 134 RIRSELSLKGASLPPEKPKEEHFDSNCITPGTPFMARLSKCLHYYIHDRLNNDP------ 187
Query: 227 SLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCT 286
W+++ VILS PGEGEHKIMD+IR +++PD++PN +H L G DADLIMLGL T
Sbjct: 188 ---GWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIMLGLAT 244
Query: 287 HEPYFSLLREEVKFN--------------------TKSNKGGSQIVTPEETKFFLLHLSL 326
HEP F+++REE K N + N+ E ++ + L++
Sbjct: 245 HEPNFTIIREEFKPNKPKPCDICGQLGHEMQECTGAEPNQREEANTFGSECQYIFVRLNV 304
Query: 327 MRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLY 386
+R+YLE E L+ P L F + E +IDDWV M F +GNDF+P+LP L I GA+ L
Sbjct: 305 LREYLERE---LQMPN-LPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLV 360
Query: 387 KVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
+Y++ + G++ + G +NL R + +++L + E F+++
Sbjct: 361 NLYKKTVYKTGGFLTDSGDVNLDRVQLIMSELGDVEDEIFKKR 403
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 112/193 (58%), Gaps = 6/193 (3%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + + A Y+R + W L YYY GC SW WY+P+HYAP+ SD
Sbjct: 520 KDRYYESKFDVSPDNLAFRNNVALQYVRGLCWVLRYYYQGCASWKWYFPYHYAPFASDFI 579
Query: 568 DFSHLNLKYEMGE-PFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ L+ ++E G PF P +QL+ V PAAS + +P P+ LM+ SPI+++YPE+F D
Sbjct: 580 NIGGLSTEFEKGTIPFRPLEQLMGVFPAASSKHVPAPWAKLMSDPKSPIIDFYPEDFKID 639
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTAL 686
LNGKK W+ V L+PF+DE +L KA++ LT+ E+ RN G +Y V LG +
Sbjct: 640 LNGKKFAWQGVALLPFVDEKRLFKALEPYYDCLTEAEKIRNVRGDDRLY----VGLGNS- 694
Query: 687 APDYFPAINENHA 699
++ + NH
Sbjct: 695 GYNFMKGLYTNHV 707
>gi|449673057|ref|XP_002169407.2| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 2-like [Hydra
magnipapillata]
Length = 999
Score = 251 bits (640), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 235/455 (51%), Gaps = 86/455 (18%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S++YP + E + E +++ + ++ S PN ND F
Sbjct: 1 MGVPAFFRWLSKKYPLIVVHCVEEKAKECNDVKVPVD-----TSLPNPNDYEF------- 48
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+ E K K E
Sbjct: 49 ------------------DNLYLDMNGII----------------HPCSHPENKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFR+AK+A E++ +
Sbjct: 75 TEMMLNIFEYIDRIFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRAAKDARERERERER 134
Query: 179 KGERLPTEKRF-DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVI 237
+ R+ + N GT FM RL LRY++ ++T D WK++ VI
Sbjct: 135 LLDDRFYXNRYVNKNFFKXGTEFMDRLAVCLRYYIAHRLTNDP---------GWKNIKVI 185
Query: 238 LSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE 297
LS TPGEGEHKIMD+IR +++PD++PN +HCL G DADLIMLGL THE +F++LREE
Sbjct: 186 LSDANTPGEGEHKIMDFIRKQRAQPDHDPNTKHCLNGADADLIMLGLATHEVHFTILREE 245
Query: 298 VKFNT---------------------KSNKGGSQIVTP--EETKFFLLHLSLMRDYLELE 334
K N K N G + + TP ++ +F + L ++R+YLE E
Sbjct: 246 FKPNQKRPCEICGQIGHEKTDCEGLPKENLGSNCVETPIVQDVEFIFIRLHVLREYLERE 305
Query: 335 FGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLP 394
LK G+ + F E +DDWV M F +GNDF+P+LP L I GA+ L +Y+ LP
Sbjct: 306 ---LKMEGLPFYNF--ERALDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKRCLP 360
Query: 395 TLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
L GY+ + G +NLKR ++ L ++ + E FR++
Sbjct: 361 QLGGYLGDSGIVNLKRAQRILQEVGDVEDEIFRKR 395
Score = 152 bits (383), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 110/175 (62%), Gaps = 6/175 (3%)
Query: 508 KTDYYHYKLDYAKVTNEVL-----RDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
K YY +K +K + V + A Y+ + W L YYY GC SW+W+YP HYAP+
Sbjct: 515 KERYYLHKFSVSKEKDPVYFQKFRKHTANEYVIGLCWVLRYYYQGCCSWNWFYPFHYAPF 574
Query: 563 ISDIKDFSHLNLKYEMGE-PFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
SD D L++K+E G PF P +QL++V PAAS + LP +++LM+ +SPI+++YP
Sbjct: 575 ASDFGDIEDLDVKFEKGTVPFKPLEQLMSVFPAASGKFLPPTWRSLMSSPDSPIIDFYPT 634
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
+F DLNGKK W+ V L+PF+DE +L + + +V + LT++E R+R +++
Sbjct: 635 DFKIDLNGKKFAWQGVALLPFVDEKRLHRTLVSVYNDLTEDEIRRSRRDDEVLFV 689
>gi|212645622|ref|NP_496958.2| Protein XRN-2 [Caenorhabditis elegans]
gi|218511968|sp|Q9U299.2|XRN2_CAEEL RecName: Full=5'-3' exoribonuclease 2 homolog
gi|189309813|emb|CAB54449.2| Protein XRN-2 [Caenorhabditis elegans]
Length = 975
Score = 250 bits (639), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 231/468 (49%), Gaps = 95/468 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR+++++YP + VV + + D D N + +C+ PN N
Sbjct: 1 MGVPAFFRWLTKKYP--ATVVNANEDRQRDQ---DGNRVPVDCTQPNPN----------- 44
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FQ+ + + +I P E + K E
Sbjct: 45 FQEFDNLYLDMNGIIHP------------------------------CTHPEDRPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
F++I + P++L +MAIDGVAPRAKMNQQR RRFR++KE E +E
Sbjct: 75 DEMFALIFEYIDRIYSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEMAEKEASIEE 134
Query: 179 KGERL-------PTEKR----FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
+ RL P +K+ FDSNCITPGTPFM RL LRY++ ++T D
Sbjct: 135 QRNRLMAEGIAVPPKKKEEAHFDSNCITPGTPFMARLADALRYYIHDRVTNDA------- 187
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
W ++ +ILS PGEGEHKIMDY+R + P ++PN HCL G DADLIMLG+ TH
Sbjct: 188 --SWANIEIILSDANVPGEGEHKIMDYVRKQRGNPAHDPNTVHCLCGADADLIMLGIATH 245
Query: 288 EPYFSLLREEVKFNT--------------KSNKG-------GSQIVTPE--ETKFFLLHL 324
E F+++REE N K +G G PE E F L +
Sbjct: 246 EANFNIIREEFVPNQPRACDLCGQYGHELKECRGAENETDLGDDYCKPEQREKNFIFLRI 305
Query: 325 SLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPL 384
++R+YLE E L P L F F +E +DDWV + F +GNDF+P+LP L I GA+
Sbjct: 306 PVLREYLEKE---LSMPN-LPFKFDVERALDDWVFLCFFVGNDFLPHLPSLEIREGAIDR 361
Query: 385 LYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L K+Y+E++ + GY+ + G L R E + L + E F+ + D
Sbjct: 362 LIKLYKEMVYQMKGYLTKDGIPELDRVEMIMKGLGRVEDEIFKRRQQD 409
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D E A Y+ + W L YYY GC SW WY+P+HYAP+ SD +
Sbjct: 543 KDRYYRAKFDVGSDDIEFRHRVAWAYVEGLCWVLRYYYQGCASWDWYFPYHYAPFASDFE 602
Query: 568 DFSHLNLKYEM-GEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ +PF P +QL++V PAASK+ LP +Q LM ++SPI++ YP +F D
Sbjct: 603 TVGEFQPDFTRPTKPFNPLEQLMSVFPAASKQHLPVEWQKLMIQDDSPIIDLYPADFRID 662
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSN 679
LNGKK W+ V L+PF+DE +L+ + +V LT EE+ RN GP ++ N
Sbjct: 663 LNGKKYAWQGVALLPFVDETRLLATLQSVYPTLTAEEKQRNTRGPNRIFIGRN 715
>gi|440639205|gb|ELR09124.1| hypothetical protein GMDG_03704 [Geomyces destructans 20631-21]
Length = 1005
Score = 250 bits (639), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 161/460 (35%), Positives = 231/460 (50%), Gaps = 99/460 (21%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+P F+++S +YP + V E + DN+ + ++ + PN N F
Sbjct: 1 MGIPAAFKWLSTKYPKILSPVIEDHRKDVDNVAIPVD-----ATQPNPNGEEF------- 48
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+ + R A E E++ + K
Sbjct: 49 ------------------DNLYLDMNGIVHPCSHPEDRPP---PANEEEMMLEIFKY--- 84
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAE---------- 170
TE+ F+ + P+KL +A+DGVAPRAKMNQQR RRFRSA+EA+
Sbjct: 85 ---TERVFNMVR-----PRKLLMIAVDGVAPRAKMNQQRSRRFRSAQEAKEKDEDKAELL 136
Query: 171 -VLEQKAKEKGERLPTE----KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
+L +A + E +E K +DSN ITPGTPFM L LRY+ K+ TD
Sbjct: 137 KMLRSQAGGQVEESTSEAMVTKTWDSNAITPGTPFMDILAASLRYWTAYKLNTDP----- 191
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
W V VILS PGEGEHKIM +IR +S PD++PN RH +YGLDADLIMLGL
Sbjct: 192 ----AWAKVKVILSDATVPGEGEHKIMQFIRSQRSSPDHDPNTRHVIYGLDADLIMLGLA 247
Query: 286 THEPYFSLLREEVKFNTKS-------NKGGSQI-------------------VTPEETKF 319
THEP+F +LRE+V F N+ G + V P + F
Sbjct: 248 THEPHFRVLREDVFFQDSKGRTCRLCNQKGHEARECRGQAKEKDGEFDEKDSVQPLKP-F 306
Query: 320 FLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN 379
LH+S++R+YLE E +P F F +E IDDWV M F +GNDF+P+LP L I
Sbjct: 307 IWLHVSVLREYLEAELYVPNQP----FRFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRE 362
Query: 380 GALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
+ L ++++ +P + GY+ + G+++L+R + L LA
Sbjct: 363 NGIDTLMAIWRDNIPHMGGYVTKDGHVDLERAQFILDGLA 402
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 97/160 (60%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A+ Y+ + W L YY+ GC SW WYYP+HYAP+ +D +
Sbjct: 592 YYEQKFKVDPRDTEFRHKVAKAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFVGLA 651
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ + +E G F PF+QL+ V+PAAS+ +P+ + +LMT E+S I+E+YP +F DLNGK
Sbjct: 652 DMKIGFEKGRIFKPFEQLMGVMPAASRHTIPDVFHDLMTNEDSEIIEFYPPDFPIDLNGK 711
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V L+PFID +L+ AM+ LL E +RN G
Sbjct: 712 KFAWQGVALLPFIDAKRLLAAMEQRYPLLPPEVAARNTVG 751
>gi|222615546|gb|EEE51678.1| hypothetical protein OsJ_33030 [Oryza sativa Japonica Group]
Length = 954
Score = 250 bits (638), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 161/447 (36%), Positives = 226/447 (50%), Gaps = 113/447 (25%)
Query: 1 MGVPKFFRYISERYPCL------------SEVVREYQIPEFDNLYLDMNGIIHNCSHPND 48
MGVP F+R++ +YP + S P + NLYLDMNGIIH C HP D
Sbjct: 1 MGVPSFYRWLVGKYPAIVSPANDDDDDVGSSSNGAAAPPVYHNLYLDMNGIIHPCFHPQD 60
Query: 49 N---DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS- 104
T +++F +F Y++ L R+++P L ++A+DGVAPRAKMNQQR RRF+S
Sbjct: 61 QVCPPSPVPTTLEEVFHSMFDYMDRLIRIVRPTSLLYLAVDGVAPRAKMNQQRARRFKSA 120
Query: 105 --AKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
AK+AEV E ++ R
Sbjct: 121 MAAKQAEVEENILRD--------------------------------------------R 136
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
FR A+ +VL ++ E D N IT GT FM +L L+Y+++ ++ +D L
Sbjct: 137 FR-AEGKKVLPRETSSSSE------VSDPNVITLGTEFMDKLSDALKYYIRARLNSDPL- 188
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WKD+ VILS PGEGEHKIM +IR + + Y+PN RHCLYGLDADLIML
Sbjct: 189 --------WKDINVILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHCLYGLDADLIML 240
Query: 283 GLCTHEPYFSLLREEVKFNTKSNKGGSQIVTP------EETKFF---------------- 320
L +HE +FS+LREEV ++N+ + +TP E KF
Sbjct: 241 ALASHEVHFSILREEVLH--QNNQENTIPITPKTFTSQEAEKFKCRAWFPRITEARPEGK 298
Query: 321 -------LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLP 373
L++ ++R+YLEL+ +K P + +E +IDD+V + FL GNDFIP++P
Sbjct: 299 LTKKPYQFLNIWVLREYLELD---MKIPNPIQ-TLDVERMIDDFVFICFLTGNDFIPHIP 354
Query: 374 DLHIINGALPLLYKVYQEVLPTLDGYI 400
L I GA+ LL +VY+ + GYI
Sbjct: 355 SLEIHEGAIDLLIEVYKTSFNKMGGYI 381
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 34/172 (19%)
Query: 496 WRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYY 555
W++ FF E +T K + AK+ NE+++ Y+ + W L YY+ SWSWYY
Sbjct: 537 WKSRFFKEKFDAET-----KDEIAKLQNEMVQK----YLEGLCWVLCYYFADVPSWSWYY 587
Query: 556 PHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPI 615
P +YAP+ SD++ S LP Y LM + S I
Sbjct: 588 PFYYAPFASDVRGLSR-------------------------SFALPGCYSKLMDCDESAI 622
Query: 616 LEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
+YP E D +GK+ W+ + +PFI++ L+ E L E RN
Sbjct: 623 QAFYPSELDIDTDGKRYLWQGIAKLPFIEDKLLLSVTKTAEKDLAVHELRRN 674
>gi|307204797|gb|EFN83355.1| 5'-3' exoribonuclease 2-like protein [Harpegnathos saltator]
Length = 880
Score = 249 bits (636), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 235/460 (51%), Gaps = 88/460 (19%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + D + + +N + PN N F +
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKPVNADGVCIPVNS-----ADPNPNGVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P+ D AP+ E E++E E +
Sbjct: 52 YLDMNG---IIHPCTHPE-------DKPAPK--------------DEDEMME-AIFECID 86
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-------EVLE 173
RL + P+KL +MAIDGVAPRAKMNQQR RRFR++KE + +
Sbjct: 87 RL----------FRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETTEKIDEIQRIR 136
Query: 174 QKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLW 229
+ KG LP EK FDSNCITPGTPFM RL L Y++ ++ D
Sbjct: 137 TELSLKGASLPPEKPKEAHFDSNCITPGTPFMSRLSACLHYYIHERLNNDP--------- 187
Query: 230 VWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEP 289
W+++ +ILS PGEGEHKIMD+IR +S+PD++PN +H L G DADLIMLGL THEP
Sbjct: 188 GWRNIKIILSDANVPGEGEHKIMDFIRRQRSQPDHDPNTQHVLCGADADLIMLGLATHEP 247
Query: 290 YFSLLREEVKFN--------------------TKSNKGGSQIVTPEETKFFLLHLSLMRD 329
F+++REE K N + N+ + E +F + L+++R+
Sbjct: 248 NFTIIREEFKPNKPKPCDICGQLGHEMRDCTGAEPNQKEEENAYGSECQFIFVRLNVLRE 307
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YLE E L P L F + E +DDWV M F +GNDF+P+LP L I GA+ L +Y
Sbjct: 308 YLERE---LSMPN-LPFKYDFERAVDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVTLY 363
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
++ + G++ + G +NL R + ++ L + E F+++
Sbjct: 364 KKAVYKTGGFLTDSGDVNLDRVQLIMSDLGDVEDEIFKKR 403
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 106/187 (56%), Gaps = 8/187 (4%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
DE W F K YY K + + A Y++ + W L YYY GC S
Sbjct: 512 DEVRLWEDGF-------KDRYYESKFGVSPDNLAFRNNVALQYVQGLCWVLRYYYQGCAS 564
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGE-PFLPFQQLLAVLPAASKELLPEPYQNLMT 609
W WY+P+HYAP+ SD + L+ ++E G PF P +QL+AV PAAS + +P P+ LM+
Sbjct: 565 WRWYFPYHYAPFASDFINIGGLSTEFEKGTIPFRPLEQLMAVFPAASSKHVPVPWAKLMS 624
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
S I+++YPE+F DLNGKK W+ V L+PF+DE +L KA+ + LT+ E+ RN
Sbjct: 625 DPRSSIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEQRLFKALASYYDSLTEAEKKRNVR 684
Query: 670 GPMLVYT 676
G +Y
Sbjct: 685 GDDRLYV 691
>gi|259016407|sp|Q60SG7.2|XRN2_CAEBR RecName: Full=5'-3' exoribonuclease 2 homolog
Length = 976
Score = 249 bits (635), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 162/470 (34%), Positives = 230/470 (48%), Gaps = 97/470 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR+++++YP E + +D + +C+ PN N
Sbjct: 1 MGVPAFFRWLTKKYPATVVNANEDR-----QRGVDGRRVPVDCTQPNPN----------- 44
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FQ+ + + +I P E + K E
Sbjct: 45 FQEFDNLYLDMNGIIHP------------------------------CTHPEDRPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE-----AEVLE 173
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A + E
Sbjct: 75 DEMFALIFEYIDRIFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEMAEKAASIEE 134
Query: 174 QKAK--EKGERLPTEKR------FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
Q+ + +G +P +K+ FDSNCITPGTPFM RL LRY++ ++T D
Sbjct: 135 QRRRLIAEGIAVPQKKKDEEEAHFDSNCITPGTPFMARLADALRYYIHDRVTNDP----- 189
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
W ++ +ILS PGEGEHKIMDYIR + P ++PN HCL G DADLIMLG+
Sbjct: 190 ----AWANIEIILSDANVPGEGEHKIMDYIRKQRGNPAHDPNTVHCLCGADADLIMLGIA 245
Query: 286 THEPYFSLLREEVKFNT--------------KSNKG-------GSQIVTPE--ETKFFLL 322
THE F+++REE N K +G G + PE E F L
Sbjct: 246 THEANFNIIREEFVPNQPRACELCGQYGHELKECRGAENDTDLGDEYCKPEQREKNFIFL 305
Query: 323 HLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGAL 382
+ ++R+YLE E L F F++E +DDWV + F +GNDF+P+LP L I GA+
Sbjct: 306 RIPVLREYLEKEMAMPN----LPFQFNLERALDDWVFLCFFVGNDFLPHLPSLEIREGAI 361
Query: 383 PLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L K+Y+E++ + GY+ + G L R E + L + E F+ + D
Sbjct: 362 DRLIKLYKEMVYEMKGYLTKDGIPELDRVEMIMRGLGKVEDEIFKRRQQD 411
Score = 160 bits (405), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCV 549
+DEDEE + + K YY K D + A Y+ + W L YYY GC
Sbjct: 526 TDEDEEPKDDIRLYESGWKERYYRAKFDVGSDDVDFRHRVAWAYVEGLCWVLRYYYQGCS 585
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYEM-GEPFLPFQQLLAVLPAASKELLPEPYQNLM 608
SW WY+P+HYAP+ SD + + +PF P +QL++V PAASK+ LP +Q LM
Sbjct: 586 SWDWYFPYHYAPFASDFETVGEFKPDFTRPTKPFNPLEQLMSVFPAASKQHLPVEWQKLM 645
Query: 609 TLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
T + SPI++ YP +F DLNGKK W+ V L+PF+DE +L++ + +V LTDEE+ RN
Sbjct: 646 TEDESPIIDLYPADFRIDLNGKKYAWQGVALLPFVDEQRLLETLKSVYPTLTDEEKYRNT 705
Query: 669 HGPMLVYTYSN 679
GP ++ N
Sbjct: 706 RGPNRIFIGRN 716
>gi|46138403|ref|XP_390892.1| hypothetical protein FG10716.1 [Gibberella zeae PH-1]
gi|115311956|sp|Q4HWE2.3|XRN2_GIBZE RecName: Full=5'-3' exoribonuclease 2
Length = 980
Score = 249 bits (635), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/470 (33%), Positives = 234/470 (49%), Gaps = 98/470 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MG+P FR++S RYP +S V+ + + + D + I + + PN N F
Sbjct: 1 MGIPAAFRWLSTRYPKIISPVIEDQPL-----VMEDGSTIPVDTTRPNPNGEEF------ 49
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
++ ++G+ + R K++
Sbjct: 50 -------------------DNLYLDMNGIVHPCSHPEDR--------------PAPKDEE 76
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE- 178
E + R+ + P+K+ +A+DGVAPRAKMNQQR RRFRSA+EA+ EQ +E
Sbjct: 77 EMMMEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRFRSAQEAQEKEQDKQEL 136
Query: 179 -------KGERLPTE-------KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKD 224
G L TE K FDSN ITPGTPFM L LRY+ + K+ TD
Sbjct: 137 IKMLKQQNGGNLSTESLETVTKKAFDSNSITPGTPFMDILALSLRYWCQYKLNTDP---- 192
Query: 225 TLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGL 284
W + +I+S PGEGEHKIM+++R ++ PD++PN RH +YGLDADLIMLGL
Sbjct: 193 -----GWAKLKIIISDATVPGEGEHKIMNFVRSQRASPDHDPNTRHVIYGLDADLIMLGL 247
Query: 285 CTHEPYFSLLREEVKFNTK--------SNKG-GSQIVTPEETK----------------F 319
THEP+F +LRE+V F + KG +Q EE K F
Sbjct: 248 ATHEPHFRVLREDVFFQDQKARLCKICGQKGHDAQNCRGEEKKKDGEHDEKDKGVALKPF 307
Query: 320 FLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN 379
LH++++R+YL +E G P F F +E +DDW+ M +GNDF+P+LP L I
Sbjct: 308 IWLHVAVLREYLAVELGVPNLP----FRFDLERAVDDWIFMCCFVGNDFLPHLPALEIRE 363
Query: 380 GALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
+ L K++++ LP + GY+ + G+++L+R + L LA + F+ +
Sbjct: 364 HGIDTLTKIWKDNLPVMGGYVTKDGHIDLERAQVILDGLAQQEDNIFKRR 413
Score = 147 bits (370), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E Y+ + W L YY+ GC SW WYYP+HYAP+ +D KD +
Sbjct: 573 YYEKKFHKDPKDIEFRHGVGRAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFKDIA 632
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+N+ +E G PF+QL++VLPAAS+ LPE + +LM S I+++YPE+F DLNGK
Sbjct: 633 KMNISFEKGRVSKPFEQLMSVLPAASRHALPEVFHDLMLNPESNIIDFYPEDFEIDLNGK 692
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG-PMLVYTYSNVNL 682
K W+ V L+PFI+ +L+ A+ + L+ + +RN G +L+++ + +L
Sbjct: 693 KFAWQGVALLPFIEMPRLLAAVQSKYPELSAADSARNEMGRDVLIFSEGHESL 745
>gi|342889646|gb|EGU88669.1| hypothetical protein FOXB_00813 [Fusarium oxysporum Fo5176]
Length = 3523
Score = 248 bits (632), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 157/459 (34%), Positives = 231/459 (50%), Gaps = 96/459 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+P FR++S RYP + V E Q + D + I + + PN N F
Sbjct: 1 MGIPAAFRWLSSRYPKIISPVIEDQPLTME----DGSTIPVDTTRPNPNGEEF------- 49
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+ + R K++ E
Sbjct: 50 ------------------DNLYLDMNGIVHPCSHPEDR--------------PAPKDEEE 77
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA--------EVL 172
+ R+ + P+K+ +A+DGVAPRAKMNQQR RRFRSA+EA E++
Sbjct: 78 MMMEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRFRSAQEAQEKEKDKQELI 137
Query: 173 EQKAKEKGERLPTE-------KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
+ ++ G L E K FDSN ITPGTPFM L LRY+ + K+ TD
Sbjct: 138 KLLKQQNGGNLTAESEETVLKKAFDSNSITPGTPFMDILALSLRYWCQYKLNTDP----- 192
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
W + +I+S PGEGEHKIM+++R ++ PD++PN RH +YGLDADLIMLGL
Sbjct: 193 ----GWAKLKIIISDATVPGEGEHKIMNFVRSQRASPDHDPNTRHVIYGLDADLIMLGLA 248
Query: 286 THEPYFSLLREEVKFNTK--------SNKG-GSQIVTPEETK----------------FF 320
THEP+F +LRE+V F + KG +Q EE K F
Sbjct: 249 THEPHFRVLREDVFFQEQKARLCKLCGQKGHDAQNCRGEEKKKDGEHDEKDKGVALKPFI 308
Query: 321 LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIING 380
LH++++R+YLE+E L P L F F +E +DDW+ M +GNDF+P+LP L I
Sbjct: 309 WLHVAVLREYLEVE---LSVPN-LPFRFDVERAVDDWIFMCCFVGNDFLPHLPALEIREH 364
Query: 381 ALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
+ L K++++ LP + GY+ + G+++L+R + L+ LA
Sbjct: 365 GIDTLTKIWKDNLPVMGGYVTKDGHIDLERAQVILSGLA 403
Score = 147 bits (371), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 105/173 (60%), Gaps = 1/173 (0%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E + A Y+ + W L YY+ GC SW WYYP+HYAP+ +D +D
Sbjct: 572 YYEKKFHKDPQDIEFRHEVARAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFQDID 631
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ + +E G PF+QL++VLPAAS+ LPE + +LM S I+++YPE+F DLNGK
Sbjct: 632 KMKISFEKGRISKPFEQLMSVLPAASRHALPEVFHDLMLNPESNIIDFYPEDFEIDLNGK 691
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG-PMLVYTYSNVNL 682
K W+ V L+PFI+ +L+ A+ A L+ + +RN G +L+++ ++ +L
Sbjct: 692 KMAWQGVALLPFIEMPRLLAAVQAKYPELSAADSARNEMGRDVLIFSEAHESL 744
>gi|294899194|ref|XP_002776531.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239883563|gb|EER08347.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 421
Score = 248 bits (632), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 231/467 (49%), Gaps = 123/467 (26%)
Query: 1 MGVPKFFRYISERYP----------CL------SEVVREYQIP-----------EFDNLY 33
MGVP FFR++ RYP C+ + Y +P EFDNLY
Sbjct: 1 MGVPTFFRWLCTRYPKVIKDAVEKVCIEVPGEGGDGANTYDVPVDFEEPNPNGIEFDNLY 60
Query: 34 LDMNGIIHNCSHPNDN-DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRA 92
LD+NGIIH C HP D P E +F +I Y++ L R+++P+KL ++AIDGVAPRA
Sbjct: 61 LDLNGIIHPCCHPEDGMTPE---NEDVMFLNIMRYVDRLVRIVRPRKLLYVAIDGVAPRA 117
Query: 93 KMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPR 152
KMNQQR RRF++A+EA TE
Sbjct: 118 KMNQQRARRFKAAQEA---------------TE--------------------------- 135
Query: 153 AKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKR--FDSNCITPGTPFMCRLHQQLRY 210
+M ++ R + KE G P++K +DSN ITPGTPF+ ++ L +
Sbjct: 136 -QMKEEEKLRRQMVKE-----------GREPPSKKGVPWDSNVITPGTPFLDKVAHMLHW 183
Query: 211 FVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRH 270
++ ++T D LW+ L ++ ILS +PGEGEHKIMD+IR + YNPN H
Sbjct: 184 YISDRMTNDPLWQ----LLGFR---CILSDAGSPGEGEHKIMDFIRKQRMMEGYNPNTTH 236
Query: 271 CLYGLDADLIMLGLCTHEPYFSLLREEV--KFNTKSNKGGSQIVTPEETK---------- 318
LYG DADLIMLGL THE F ++RE V K G P E
Sbjct: 237 MLYGADADLIMLGLATHEISFYIIREVVLKPEERKCYLCGKVGHLPSECTGDDQQPDLGD 296
Query: 319 -------------FFLLHLSLMRDYLELEFGKLKEP----GVLSFPFSIENIIDDWVLMG 361
F ++ L ++R+YL +F P +L FPF +E +IDD+V M
Sbjct: 297 ESEEDEDMLEMKPFQIISLPVLREYLVEQFTTAFCPPNQKCILPFPFDVERVIDDFVFMC 356
Query: 362 FLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNL 408
F +GNDF+P+LP L+I +G++ + +Y E+LPTL Y+ G +NL
Sbjct: 357 FFVGNDFLPHLPSLNIRDGSIDQMICLYVEILPTLTDYLTCQGEVNL 403
>gi|449528758|ref|XP_004171370.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 373
Score = 247 bits (630), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 168/435 (38%), Positives = 225/435 (51%), Gaps = 112/435 (25%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------YQIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + +V+ E IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVVIDGIAIPVDTSKPNPNKLEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D T ++FQ +F YI+ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPSP--TTFSEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FR+AK+A + T R +F ++ GR
Sbjct: 119 FRAAKDAIDAAAEE--------TRLREEF--------------------------EKEGR 144
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ +E++V FDSN ITPGT FM L L+Y+V +++ D
Sbjct: 145 KLPPKEESQV-----------------FDSNVITPGTDFMAVLSIALQYYVHIRLNNDP- 186
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
WK++ VILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLIM
Sbjct: 187 --------GWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 238
Query: 282 LGLCTHEPYFSLLRE------------------------EVKFNTKSNKGGSQI--VTPE 315
L L THE +FS+LRE E K KS + ++ VT +
Sbjct: 239 LALATHEVHFSILREIVFTPGQQEKCFLCGQMGHFAADCEGKAKRKSGEFDEKVEEVTIK 298
Query: 316 ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
+ F LH+ +R+YLE E ++ P F IE I+DD+V M F +GNDF+P++P L
Sbjct: 299 KPYQF-LHIWTLREYLEYEM-RIPNP---PFAIDIERIVDDFVFMCFFVGNDFLPHMPTL 353
Query: 376 HIINGALPLLYKVYQ 390
I L L+ +Y
Sbjct: 354 EIREVNLMLVLTIYM 368
>gi|148696566|gb|EDL28513.1| 5'-3' exoribonuclease 2, isoform CRA_a [Mus musculus]
Length = 915
Score = 247 bits (630), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 162/430 (37%), Positives = 219/430 (50%), Gaps = 96/430 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L FPF +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVL 393
L +Y+ V+
Sbjct: 362 RLVNIYKNVV 371
Score = 157 bits (396), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 481 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 540
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ ++ ++E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 541 GIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSSIIDFYPEDFAID 600
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 601 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVLFV 650
>gi|308503096|ref|XP_003113732.1| CRE-XRN-2 protein [Caenorhabditis remanei]
gi|308263691|gb|EFP07644.1| CRE-XRN-2 protein [Caenorhabditis remanei]
Length = 988
Score = 247 bits (630), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 162/468 (34%), Positives = 227/468 (48%), Gaps = 95/468 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR+++++YP + VV + + D D + +C+ PN N
Sbjct: 1 MGVPAFFRWLTKKYP--ATVVNANEDRQRD---ADGKRVPVDCTQPNPN----------- 44
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
FQ+ + + +I P E + K E
Sbjct: 45 FQEFDNLYLDMNGIIHP------------------------------CTHPEDRPPPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE-----AEVLE 173
F++I + P++L +MAIDGVAPRAKMNQQR RRFR++KE A + E
Sbjct: 75 DEMFALIFEYIDRIYSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEMAEKAASIEE 134
Query: 174 QKAKEKGERLPT------EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
Q+ + E + E FDSNCITPGTPFM RL LRY++ ++T D
Sbjct: 135 QRNRLMAEGIAVPPPKKEEAHFDSNCITPGTPFMARLADALRYYIHDRVTNDA------- 187
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
W ++ +ILS PGEGEHKIMDYIR + P ++PN HCL G DADLIMLG+ TH
Sbjct: 188 --SWANIEIILSDANVPGEGEHKIMDYIRKQRGNPAHDPNTVHCLCGADADLIMLGIATH 245
Query: 288 EPYFSLLREEVKFNT--------------KSNKG-------GSQIVTPE--ETKFFLLHL 324
E F+++REE N K +G G PE E F L +
Sbjct: 246 EANFNIIREEFVPNQPRACELCGQYGHELKECRGAENDTDLGDDYCKPEQREKNFIFLRI 305
Query: 325 SLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPL 384
++R+YLE E L F F +E +DDWV + F +GNDF+P+LP L I GA+
Sbjct: 306 PVLREYLEKEMAMPN----LPFKFDLERALDDWVFLCFFVGNDFLPHLPSLEIREGAIDR 361
Query: 385 LYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L K+Y+E++ + GY+ + G L R E + L + E F+ + D
Sbjct: 362 LIKLYKEMVYEMRGYLTKDGIPELDRVEMIMKGLGKVEDEIFKRRQQD 409
Score = 157 bits (396), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
+EDEE + + K YY K D + A Y+ + W L YYY GC S
Sbjct: 526 EEDEEPKDDIRLFESGWKDRYYRAKFDVGSDDVDFRHRVAWAYVEGLCWVLRYYYQGCSS 585
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKY-EMGEPFLPFQQLLAVLPAASKELLPEPYQNLMT 609
W WY+P+HYAP+ SD + + + +PF P +QL++V PAASK+ LP +Q LM
Sbjct: 586 WDWYFPYHYAPFASDFETVGEFKPDFTKPTKPFNPLEQLMSVFPAASKQHLPVEWQKLMI 645
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
++SPI++ YP +F DLNGKK W+ V L+PF+DE +L+ + +V LTDEE+ RN
Sbjct: 646 EDDSPIIDLYPADFRIDLNGKKYAWQGVALLPFVDEQRLLATLKSVYPTLTDEEKQRNTR 705
Query: 670 GPMLVYTYSN 679
GP ++ N
Sbjct: 706 GPNRIFIGRN 715
>gi|429849601|gb|ELA24966.1| GTPase-activator protein for Ras-like GTPase, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 3409
Score = 246 bits (629), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 227/459 (49%), Gaps = 96/459 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+P FR++S +YP + V E Q + D D + I + + PN N
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEEQPVKMD----DGSEIPVDTTGPNPNGEEL------- 49
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+ + R K++ E
Sbjct: 50 ------------------DNLYLDMNGIVHPCSHPEDR--------------PAPKDEEE 77
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA--------EVL 172
+ R+ + P+KL +A+DGVAPRAKMNQQR RRFRSA++A EV+
Sbjct: 78 MMLEVFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFRSAQDAQQKEEDKEEVM 137
Query: 173 EQKAKEKGERLP-------TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
+ ++ G +P T+K FDSN ITPGTPFM L LRY+ K++TD
Sbjct: 138 KLLKQQNGGVIPEETLESMTKKAFDSNSITPGTPFMDILAASLRYWCAYKLSTDP----- 192
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
W + +I+S PGEGEHKIM ++R + PDY+PN RH +YGLDADLIMLGL
Sbjct: 193 ----AWARLKIIISDATVPGEGEHKIMSFVRSQRISPDYDPNTRHVIYGLDADLIMLGLA 248
Query: 286 THEPYFSLLREEVKFN----------------TKSNKGGS---------QIVTPEETKFF 320
THEP+F +LRE+V F ++ +G + Q P F
Sbjct: 249 THEPHFRVLREDVFFQDSKPRVCRICGQKGHEARNCRGEAKEKVGEFDEQEKAPALKPFI 308
Query: 321 LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIING 380
LH+S++R+YL +E L PG L F F +E +DDWV M +GNDF+P+LP L I
Sbjct: 309 WLHVSILREYLAVE---LNVPG-LPFRFDLERALDDWVFMCCFVGNDFLPHLPALEIREN 364
Query: 381 ALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
+ L ++++ LP + GY+ + G+++L R + L LA
Sbjct: 365 GIDTLTAIWKDNLPHMGGYVTKDGHVDLARAQLILNGLA 403
Score = 150 bits (379), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 98/160 (61%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K + E A Y+ + W L YY+ GC SW WYYP+HYAP+ +D +
Sbjct: 572 YYEQKFHVDRKDIEFRHQVARAYVEGLSWVLLYYFQGCPSWEWYYPYHYAPFAADFVELD 631
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ + +E G PF+QL++VLPAAS+ LPE + +LM E+S ++++YP +F DLNGK
Sbjct: 632 KMEIAFEKGRISRPFEQLMSVLPAASRHALPEVFHDLMLNEDSEVIDFYPTDFEIDLNGK 691
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V L+PFI+ +L+ A++ LL+ +R+RN G
Sbjct: 692 KMAWQGVALLPFIEMPRLLAAVEKKYPLLSAADRARNGVG 731
>gi|149041186|gb|EDL95119.1| 5'-3' exoribonuclease 2 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 915
Score = 246 bits (628), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 162/430 (37%), Positives = 219/430 (50%), Gaps = 96/430 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THE
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L FPF +E IDDWV M F +GNDF+P+LP L I GA+
Sbjct: 306 LNVLREYLERELTM----ASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAID 361
Query: 384 LLYKVYQEVL 393
L +Y+ V+
Sbjct: 362 RLVNIYKNVV 371
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 481 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 540
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + ++E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 541 GIADMPSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSSIIDFYPEDFAID 600
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 601 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGSDVLFV 650
>gi|340375702|ref|XP_003386373.1| PREDICTED: 5'-3' exoribonuclease 2-like [Amphimedon queenslandica]
Length = 1066
Score = 246 bits (628), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/346 (41%), Positives = 198/346 (57%), Gaps = 52/346 (15%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-------EVLEQKAKE 178
F++I F P++L +MAIDGVAPRAKMNQQR RRFRSAKE+ + + Q+ E
Sbjct: 82 FEYIDRIFNIVRPRRLVYMAIDGVAPRAKMNQQRSRRFRSAKESVDKLEEIKKVRQELAE 141
Query: 179 KGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDV 234
+G LP K FDSNCITPGT FM L L+Y++ ++ + WK +
Sbjct: 142 RGVGLPPLKPDSAHFDSNCITPGTQFMANLAICLQYYIHDRMNHNP---------AWKGL 192
Query: 235 CVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLL 294
VILS PGEGEHKIMDYIR ++ ++PN HCLYG DADLIMLGL THEPYF++L
Sbjct: 193 KVILSDANVPGEGEHKIMDYIRKQRASVGHDPNTHHCLYGADADLIMLGLATHEPYFTIL 252
Query: 295 REEVKFN---------------------TKSNKGG-SQIVTPE---ETKFFLLHLSLMRD 329
RE+ K N + KG ++ T E +F + ++++R+
Sbjct: 253 REDFKPNQPRPCEICNQYGHSMTECTGEAREKKGEFDELATANIAMEKEFIFIRINVLRE 312
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YL+ E L+ G L F F E IDDWV M F +GNDF+P+LP L I GA+ L +Y
Sbjct: 313 YLQRE---LRIDG-LDFKFDFERAIDDWVFMCFFVGNDFLPHLPSLQIREGAIDRLINLY 368
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF-REKYADIQ 434
++ LP+ Y+ E G++++K + L +L + E F R + DI+
Sbjct: 369 KKFLPSTKSYLTENGFVDVKNVQLILFELGKVEDEIFIRRRDQDIR 414
Score = 150 bits (380), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 102/171 (59%), Gaps = 1/171 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K + + +R E Y + W + YYY GC SW WYYP HYAP+ SD +
Sbjct: 564 KERYYQSKFCVSSNDIDFVRQVVESYSEGLCWVMSYYYQGCPSWKWYYPFHYAPFASDFR 623
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ ++E G +PF P +QL++V PAAS + LP +Q LM ++S I+++YP F D
Sbjct: 624 YIRDVRDRFETGSKPFRPLEQLMSVFPAASAKFLPPSWQTLMLDDDSSIIDFYPTNFKID 683
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
LNGKK W+ V L+PF+DE +L +A++ + H+L E RN G L++ +
Sbjct: 684 LNGKKFAWQGVALLPFVDECRLHEALEPLYHMLDPLETVRNSLGNDLIFVH 734
Score = 126 bits (317), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 95/153 (62%), Gaps = 30/153 (19%)
Query: 1 MGVPKFFRYISERYP-----CLSEVVREYQ---IP-----------EFDNLYLDMNGIIH 41
MGVP FFR++S++YP C+ E ++ Q +P EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCVEEKRKKLQGIDVPIDATLPNPNEVEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDN-DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
C HP D P TE ++ IF YI+ +F +++P++L +MAIDGVAPRAKMNQQR R
Sbjct: 61 PCCHPEDKPAPE---TEDEMMVAIFEYIDRIFNIVRPRRLVYMAIDGVAPRAKMNQQRSR 117
Query: 101 RFRSAKEA-------EVLEQKAKEKGERLPTEK 126
RFRSAKE+ + + Q+ E+G LP K
Sbjct: 118 RFRSAKESVDKLEEIKKVRQELAERGVGLPPLK 150
>gi|308805434|ref|XP_003080029.1| putative 5-3 exoribonuclease (ISS) [Ostreococcus tauri]
gi|116058488|emb|CAL53677.1| putative 5-3 exoribonuclease (ISS) [Ostreococcus tauri]
Length = 1057
Score = 246 bits (627), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 240/476 (50%), Gaps = 82/476 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP F+R++S++YP + E V E + D L + + S N N F +
Sbjct: 1 MGVPSFYRWLSQKYPKIVEDVVEDE--PMDEL---GRAVALDASRANPNGIEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I F P+ D AP E EV E
Sbjct: 52 YLDMNGIIHPCF---HPE-------DRPAP--------------TTEGEVFENI------ 81
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 178
FD+I F P+K+ +MAIDGVAPRAKMNQQR RRFR+A+EA+ + ++
Sbjct: 82 -------FDYIDRLFLMIRPRKVLYMAIDGVAPRAKMNQQRSRRFRAAQEAKEKAMEEEK 134
Query: 179 KGERLPTEKR----------FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
E+L E FDSN ITPGTPFM RL + L+Y+V ++ D
Sbjct: 135 LREKLTREGVKVQPKVESGVFDSNVITPGTPFMGRLSEALKYYVHDRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
W+ + VI S PGEGEHK M YIR + P NPN RH +YGLDADLIMLGL THE
Sbjct: 187 -GWRGIEVIFSDASVPGEGEHKAMHYIRQQRGLPGANPNTRHVVYGLDADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNTKSNKGGSQIVTPEETK---------FFLLHLSLMRDYLELEFGKLK 339
P+F +LRE V +N + + EETK + LL +S++R+YL LE L+
Sbjct: 246 PHFWILRELVFQKKDTNAPQTLGMGTEETKKKVAIARKPYQLLSVSVLREYLALE---LR 302
Query: 340 EPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGY 399
F E + DD++ M F +GNDF+P+ P L I GA+ LL +Y+ +LPTL GY
Sbjct: 303 PVAPTPFKLDPERLFDDFIFMCFFVGNDFLPHSPTLEIREGAIDLLMTLYRNLLPTLGGY 362
Query: 400 INEGGYLNLKRFEKFLTKLASFD---FEQFREKYADIQYLEGKMGKKFSDVFHKEK 452
+ G NL E F+ +A + F++ +K A ++ + +K D + +++
Sbjct: 363 LCADGRPNLPVVENFVQVVAQHEDAIFQKRAKKEAQMRSRRHREKQKAKDYYDRQR 418
Score = 168 bits (425), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 106/161 (65%), Gaps = 1/161 (0%)
Query: 508 KTDYYHYKLDYAKVTNE-VLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI 566
K YY K+ T E + R Y+R + W YY+ GC SW W+YP+HYAP+ SD+
Sbjct: 641 KDRYYEAKMKATPQTREQIARGMVVEYVRGLIWVCRYYFEGCCSWGWFYPYHYAPFASDL 700
Query: 567 KDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + ++ +E+G+PF PF QL+ VLPAAS LP Y LM+ ++SPI+++YPE+F D
Sbjct: 701 TNLAGISTDFELGKPFKPFSQLMGVLPAASSHALPAAYAPLMSDKDSPIIDFYPEDFDLD 760
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
+NGK+ W+AV L+P+ID +L++ D +E+ LT EE+ RN
Sbjct: 761 MNGKRFTWQAVALLPWIDSRRLLEQTDMLEYTLTAEEKRRN 801
>gi|156034478|ref|XP_001585658.1| hypothetical protein SS1G_13542 [Sclerotinia sclerotiorum 1980]
gi|154698945|gb|EDN98683.1| hypothetical protein SS1G_13542 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 931
Score = 246 bits (627), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 232/473 (49%), Gaps = 145/473 (30%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ--------IP-----------EFDNLYLDMNGIIH 41
MGVP FR+++++YP + V E Q IP E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLTKQYPKIVSPVIEEQPREIDGQIIPIDIRGPNPNGEECDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
CSHP D P E+++ +IF Y + + M++P+KL +AIDGVAPRAKMNQQR RR
Sbjct: 61 PCSHPEDRPPP--KDEEEMMLEIFKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FR+A+EA ++KA++K E L KM + +G
Sbjct: 119 FRAAQEA---KEKAEDKAELL-------------------------------KMLKSQGT 144
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+ A+E EV +K +DSN ITPGTPFM L LRY++ K+ TD
Sbjct: 145 Q---AEETEV--------------KKAWDSNEITPGTPFMDILAASLRYWIAYKLNTDP- 186
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
W + VI+S PGEGEHKIM+++R +S PD++PN RH +YGLDADLIM
Sbjct: 187 --------AWAKMKVIISDSTVPGEGEHKIMEFVRSQRSSPDHDPNTRHVMYGLDADLIM 238
Query: 282 LGLCTHEPYFSLLREEVKFN----------------TKSNKGGSQI---------VTPEE 316
LGL THEP+F +LRE+V FN + KG +I P
Sbjct: 239 LGLATHEPHFRILREDVFFNDGKPRTCKLCGQHGHEARECKGMYKIKDGEFDEKASAPTL 298
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F LH+S++R+YL E +++E G+ +
Sbjct: 299 KPFIWLHVSILREYLAAEILEIREDGINT------------------------------- 327
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
L ++++ +P + GY+ + G+++L+R + L LA + FR +
Sbjct: 328 --------LIAIWRDNIPYMGGYLTKDGHVDLERAQFILDGLAKQEDAIFRRR 372
Score = 152 bits (384), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 98/160 (61%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K + E + Y+ + W L YY+ GC SW WYYP+HYAP+ +D +
Sbjct: 544 YYEQKFNRDPKDIEFRHQVGKAYVEGLAWVLLYYFQGCPSWDWYYPYHYAPFAADFANLK 603
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ + ++ G F PF+QL+ VLPAAS++ +PE + +LMT E+S I+++YPE+F DLNGK
Sbjct: 604 DMKINFQKGRIFRPFEQLMGVLPAASRQAIPEQFHHLMTNEDSEIIDFYPEDFIVDLNGK 663
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V L+PFID +L+ AM V L + +RN G
Sbjct: 664 KFAWQGVALLPFIDSERLLDAMAKVYPTLPVDVSARNGLG 703
>gi|406861589|gb|EKD14643.1| 5'->3' exoribonculease Dhp1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 988
Score = 245 bits (626), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 157/466 (33%), Positives = 226/466 (48%), Gaps = 96/466 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDN--LYLDMNGIIHNCSHPNDNDPHFRITEK 58
MGVP FR++S++YP + V E Q E D + +D G PN N F
Sbjct: 1 MGVPALFRWLSQKYPKIISNVIEEQPREIDGQEIPIDTRG-------PNPNGEEF----- 48
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
++ ++G+ + R K++
Sbjct: 49 --------------------DNLYLDMNGIVHPCSHPEDR--------------PAPKDE 74
Query: 119 GERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA--------E 170
E + ++ + P+KL +AIDGVAPRAKMNQQR RRFRSA+EA E
Sbjct: 75 EEMMLAIFKYTDRVVNMVRPRKLLLIAIDGVAPRAKMNQQRSRRFRSAQEAQEKEADKAE 134
Query: 171 VLEQKAKEKG--ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+L+ + G E +K +DSN ITPGTPFM L LRY++ K+ TD
Sbjct: 135 LLKMLKSQGGHIEEPEIKKAWDSNEITPGTPFMDILAASLRYWIAYKLNTDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
W + VI+S PGEGEHKIM++IR +S P ++PN RH +YGLDADLIMLGL THE
Sbjct: 187 -AWAKMKVIISDSTVPGEGEHKIMEFIRSQRSSPHHDPNTRHVIYGLDADLIMLGLGTHE 245
Query: 289 PYFSLLREEV-------------------------KFNTKSNKGGSQIVTPEETKFFLLH 323
P+F +LRE+V K K + + P F LH
Sbjct: 246 PHFRVLREDVFAQERGPRLCRLCGQAGHEARECTGKAKVKDGEFDEKASAPALKPFIWLH 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
+S++R+YL E +P + F +E IDDWV M F +GNDF+P+LP L I +
Sbjct: 306 VSVLREYLAAELYVPDQP----YRFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRENGID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
L ++++ +P + GY+ + G+++L+R + L LA + FR +
Sbjct: 362 TLIAIWRDNIPHMGGYLTKDGHVDLERAQFILDGLAKQEDAIFRRR 407
Score = 153 bits (387), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 105/163 (64%), Gaps = 1/163 (0%)
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
A+ Y+ + W L YY+ GC SW WYYP+HYAP+ +D + S + + +E G F PF+QL+
Sbjct: 597 AKAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFANLSDIKISFEKGRIFRPFEQLM 656
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
VLPAAS++ +PE + +LMT S I+++YPE+F DLNGKK W+ V L+PFID +L+
Sbjct: 657 GVLPAASRQAIPETFHDLMTDPESEIIDFYPEDFVVDLNGKKFAWQGVALLPFIDSDRLL 716
Query: 650 KAMDAVEHLLTDEERSRNRHGP-MLVYTYSNVNLGTALAPDYF 691
AM +L E +RN G +L+ ++ +L +A +++
Sbjct: 717 SAMAKKYPMLPPEVAARNGVGKDVLLVAEAHESLYADIATNFY 759
>gi|302663765|ref|XP_003023520.1| hypothetical protein TRV_02267 [Trichophyton verrucosum HKI 0517]
gi|291187523|gb|EFE42902.1| hypothetical protein TRV_02267 [Trichophyton verrucosum HKI 0517]
Length = 1037
Score = 243 bits (621), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 229/459 (49%), Gaps = 97/459 (21%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FR++S +YP + V E Q E +D I + + PN N +
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQE-----IDGQEIPVDITKPNPNGEEM----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P +G P A +GE
Sbjct: 52 YLDMNG---IVHPCTHP--------EGKPPPAN------------------------EGE 76
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+ ++ + P+K+ +A+DGVAPRAKMNQQR RRFRSA++A+ ++K E
Sbjct: 77 MMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRFRSAQDAKAEDEKKVEFA 136
Query: 181 ERLPTEKR---------------FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
+ L +KR +D+N ITPGTPFM L LRY+V K++TD
Sbjct: 137 KLLKKQKRGKKDVTITEEVITKTWDTNVITPGTPFMDILALALRYWVAYKLSTDP----- 191
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
W+ + VI+S PGEGEHKIM++IR ++ P+Y+PN RH +YGLDADLIMLGL
Sbjct: 192 ----GWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYGLDADLIMLGLG 247
Query: 286 THEPYFSLLREEVKFN---TKSNKGGSQIVTPEET----------------------KFF 320
THEP+F +LRE+V F ++ K Q EE F
Sbjct: 248 THEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKRGEFDEKQKGNPLKPFI 307
Query: 321 LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIING 380
LH+S++R+YL +E ++P FPF +E +DDWV M F +GNDF+P+LP L I
Sbjct: 308 WLHVSVLREYLAVEMQVPQQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLEIREN 363
Query: 381 ALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
+ L ++++ +P + GY+ + G ++L + + L LA
Sbjct: 364 GIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLA 402
Score = 173 bits (438), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 102/141 (72%)
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D +++++ G PF PF+QL+
Sbjct: 606 ARAYVEGLSWVLLYYFQGCPSWTWYYPYHYAPFAADFVDIGEMDVQFTKGTPFKPFEQLM 665
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
VLPAAS +PE +++LM+ ENS I+++YPE+F DLNGKK W+ V L+PFIDE +L+
Sbjct: 666 GVLPAASNHAIPEVFRDLMSDENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLL 725
Query: 650 KAMDAVEHLLTDEERSRNRHG 670
AMD HLL++EE++RN G
Sbjct: 726 AAMDKRYHLLSEEEQARNAMG 746
>gi|449452066|ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 1101
Score = 243 bits (620), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 174/501 (34%), Positives = 253/501 (50%), Gaps = 110/501 (21%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MGVP F+R+++E+YP + +V+ E + + +D I + S PN N F
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEE------EPVVIDGIAIPVDTSKPNPNKLEF----DN 50
Query: 60 IFQDIFHYIEILFR-MIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
++ D+ I F +P F +EV +
Sbjct: 51 LYLDMNGIIHPCFHPEDRPSPTTF-------------------------SEVFQCM---- 81
Query: 119 GERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAK-------EA 169
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFR+AK E
Sbjct: 82 ---------FDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKDAIDAAAEE 132
Query: 170 EVLEQKAKEKGERLPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTL 226
L ++ +++G +LP ++ FDSN ITPGT FM L L+Y+V +++ D
Sbjct: 133 TRLREEFEKEGRKLPPKEESQVFDSNVITPGTDFMAVLSIALQYYVHIRLNNDP------ 186
Query: 227 SLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCT 286
WK++ VILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLIML L T
Sbjct: 187 ---GWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALAT 243
Query: 287 HEPYFSLLRE------------------------EVKFNTKSNKGGSQI--VTPEETKFF 320
HE +FS+LRE E K KS + ++ VT ++ F
Sbjct: 244 HEVHFSILREIVFTPGQQEKCFLCGQMGHFAADCEGKAKRKSGEFDEKVEEVTIKKPYQF 303
Query: 321 LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIING 380
LH+ +R+YLE E ++ P F IE I+DD+V M F +GNDF+P++P L I G
Sbjct: 304 -LHIWTLREYLEYEM-RIPNP---PFAIDIERIVDDFVFMCFFVGNDFLPHMPTLEIREG 358
Query: 381 ALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKM 440
A+ LL VY++ L GY+ +G NL+R E F+ + S++ + F+++ ++
Sbjct: 359 AINLLLAVYKKEFRALGGYLTDGSKPNLQRVEHFIQAVGSYEDKIFQKR--------ARL 410
Query: 441 GKKFSDVFHKEKSKEMDPDLA 461
+K +D +EK + D A
Sbjct: 411 HQKQADRIKREKGQTRRGDDA 431
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 105/172 (61%), Gaps = 9/172 (5%)
Query: 496 WRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYY 555
WR +++E + + + +++ D Y + W +HYYY G SW W+Y
Sbjct: 559 WRERYYNE---------KFSANTPEELDDIRNDVVLRYTEGLCWVMHYYYEGVCSWQWFY 609
Query: 556 PHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPI 615
P+HYAP+ SD+K LN+ + +G PF PF QLL V PAAS LPE Y+ LMT +NSPI
Sbjct: 610 PYHYAPFASDLKGLGELNISFNLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNSPI 669
Query: 616 LEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
+++YP +F D+NGK+ W+ + +PFIDE +L+ + VEH LT+EE RN
Sbjct: 670 IDFYPTDFEVDMNGKRYSWQGIAKLPFIDETRLLAEVAKVEHTLTEEEARRN 721
>gi|302509948|ref|XP_003016934.1| hypothetical protein ARB_05228 [Arthroderma benhamiae CBS 112371]
gi|291180504|gb|EFE36289.1| hypothetical protein ARB_05228 [Arthroderma benhamiae CBS 112371]
Length = 1038
Score = 243 bits (620), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 229/459 (49%), Gaps = 97/459 (21%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FR++S +YP + V E Q E +D I + + PN N +
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQE-----IDGQEIPVDITKPNPNGEEM----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P +G P A +GE
Sbjct: 52 YLDMNG---IVHPCTHP--------EGKPPPAN------------------------EGE 76
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+ ++ + P+K+ +A+DGVAPRAKMNQQR RRFRSA++A+ ++K E
Sbjct: 77 MMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRFRSAQDAKAEDEKKVEFA 136
Query: 181 ERLPTEKR---------------FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
+ L +KR +D+N ITPGTPFM L LRY+V K++TD
Sbjct: 137 KLLKKQKRGKKDVTITEEVITKTWDTNVITPGTPFMDILALALRYWVAYKLSTDP----- 191
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
W+ + VI+S PGEGEHKIM++IR ++ P+Y+PN RH +YGLDADLIMLGL
Sbjct: 192 ----GWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYGLDADLIMLGLG 247
Query: 286 THEPYFSLLREEVKFN---TKSNKGGSQIVTPEET----------------------KFF 320
THEP+F +LRE+V F ++ K Q EE F
Sbjct: 248 THEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKRGEFDEKQKGNPLKPFI 307
Query: 321 LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIING 380
LH+S++R+YL +E ++P FPF +E +DDWV M F +GNDF+P+LP L I
Sbjct: 308 WLHVSVLREYLAVEMQVPQQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLEIREN 363
Query: 381 ALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
+ L ++++ +P + GY+ + G ++L + + L LA
Sbjct: 364 GIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLA 402
Score = 170 bits (431), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 101/141 (71%)
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D +++++ G PF PF+QL+
Sbjct: 606 ARAYVEGLSWVLLYYFQGCPSWTWYYPYHYAPFAADFVDIGEMDVQFTKGTPFKPFEQLM 665
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
VLPAAS +PE +++LM+ ENS I+++YPE+F DLNGKK W+ V L+PFIDE +L+
Sbjct: 666 GVLPAASNHAIPEVFRDLMSDENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLL 725
Query: 650 KAMDAVEHLLTDEERSRNRHG 670
AM HLL++EE++RN G
Sbjct: 726 AAMGKRYHLLSEEEQARNAMG 746
>gi|326479818|gb|EGE03828.1| hypothetical protein TEQG_02862 [Trichophyton equinum CBS 127.97]
Length = 1035
Score = 243 bits (619), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 229/459 (49%), Gaps = 97/459 (21%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FR++S +YP + V E Q E +D I + + PN N +
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQE-----IDGQEIPVDITKPNPNGEEM----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P +G P A +GE
Sbjct: 52 YLDMNG---IVHPCTHP--------EGKPPPAN------------------------EGE 76
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+ ++ + P+K+ +A+DGVAPRAKMNQQR RRFRSA++A+ ++K E
Sbjct: 77 MMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRFRSAQDAKAEDEKKVEFA 136
Query: 181 ERLPTEKR---------------FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
+ L +KR +D+N ITPGTPFM L LRY+V K++TD
Sbjct: 137 KLLKKQKRGKKDVTVAEEVITKTWDTNVITPGTPFMDILALALRYWVAYKLSTDP----- 191
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
W+ + VI+S PGEGEHKIM++IR ++ P+Y+PN RH +YGLDADLIMLGL
Sbjct: 192 ----GWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYGLDADLIMLGLG 247
Query: 286 THEPYFSLLREEVKFN---TKSNKGGSQIVTPEET----------------------KFF 320
THEP+F +LRE+V F ++ K Q EE F
Sbjct: 248 THEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKRGEFDEKQKGNPLKPFI 307
Query: 321 LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIING 380
LH+S++R+YL +E ++P FPF +E +DDWV M F +GNDF+P+LP L I
Sbjct: 308 WLHVSVLREYLAVEMQVPQQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLEIREN 363
Query: 381 ALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
+ L ++++ +P + GY+ + G ++L + + L LA
Sbjct: 364 GIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLA 402
Score = 173 bits (438), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 102/141 (72%)
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D +++++ G PF PF+QL+
Sbjct: 606 ARAYVEGLSWVLLYYFQGCPSWTWYYPYHYAPFAADFVDIGEMDVQFTKGTPFKPFEQLM 665
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
VLPAAS +PE +++LM+ ENS I+++YPE+F DLNGKK W+ V L+PFIDE +L+
Sbjct: 666 GVLPAASNHAIPEVFRDLMSDENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLL 725
Query: 650 KAMDAVEHLLTDEERSRNRHG 670
AMD HLL++EE++RN G
Sbjct: 726 AAMDKRYHLLSEEEQARNAMG 746
>gi|315040952|ref|XP_003169853.1| 5'-3' exoribonuclease 2 [Arthroderma gypseum CBS 118893]
gi|311345815|gb|EFR05018.1| 5'-3' exoribonuclease 2 [Arthroderma gypseum CBS 118893]
Length = 1038
Score = 243 bits (619), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 229/459 (49%), Gaps = 97/459 (21%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FR++S +YP + V E Q E +D I + + PN N +
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQE-----IDGQEIPVDITKPNPNGEEM----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P +G P A +GE
Sbjct: 52 YLDMNG---IVHPCTHP--------EGKPPPAN------------------------EGE 76
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+ ++ + P+KL +A+DGVAPRAKMNQQR RRFRSA++A+ ++K E
Sbjct: 77 MMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFRSAQDAKAEDEKKVEFA 136
Query: 181 ERLPTEKR---------------FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
+ L +KR +D+N ITPGTPFM L LRY+V K++TD
Sbjct: 137 KLLKKQKRGKSDVTIAEEVIKKTWDTNVITPGTPFMDILALALRYWVAYKLSTDP----- 191
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
W+ + +I+S PGEGEHKIM+++R ++ P+Y+PN RH +YGLDADLIMLGL
Sbjct: 192 ----GWEKLKIIISDATVPGEGEHKIMEFVRSQRACPEYDPNTRHVIYGLDADLIMLGLG 247
Query: 286 THEPYFSLLREEVKFN---TKSNKGGSQIVTPEET----------------------KFF 320
THEP+F +LRE+V F ++ K Q EE F
Sbjct: 248 THEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKQGEFDEKQKGSPLKPFI 307
Query: 321 LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIING 380
LH+S++R+YL +E ++P FPF +E +DDWV M F +GNDF+P+LP L I
Sbjct: 308 WLHVSILREYLAVEMQVPQQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLEIREN 363
Query: 381 ALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
+ L ++++ +P + GY+ + G ++L + + L LA
Sbjct: 364 GIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLA 402
Score = 171 bits (432), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 101/141 (71%)
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D +++++ G PF PF+QL+
Sbjct: 605 ARAYVEGLSWVLLYYFQGCPSWTWYYPYHYAPFAADFVDIGEMDVQFNKGTPFKPFEQLM 664
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
VLPAAS +PE +++LM+ ENS I+++YPE+F DLNGKK W+ V L+PFIDE +L+
Sbjct: 665 GVLPAASNHAIPEVFRDLMSDENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLL 724
Query: 650 KAMDAVEHLLTDEERSRNRHG 670
AMD HLL++ E++RN G
Sbjct: 725 AAMDKRYHLLSEAEQARNAMG 745
>gi|327302674|ref|XP_003236029.1| 5'-3' exoribonuclease [Trichophyton rubrum CBS 118892]
gi|326461371|gb|EGD86824.1| 5'-3' exoribonuclease [Trichophyton rubrum CBS 118892]
Length = 1034
Score = 243 bits (619), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 229/459 (49%), Gaps = 97/459 (21%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FR++S +YP + V E Q E +D I + + PN N +
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQE-----IDGQEIPVDITKPNPNGEEM----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P +G P A +GE
Sbjct: 52 YLDMNG---IVHPCTHP--------EGKPPPAN------------------------EGE 76
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+ ++ + P+K+ +A+DGVAPRAKMNQQR RRFRSA++A+ ++K E
Sbjct: 77 MMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRFRSAQDAKAEDEKKVEFA 136
Query: 181 ERLPTEKR---------------FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
+ L +KR +D+N ITPGTPFM L LRY+V K++TD
Sbjct: 137 KLLKKQKRGKKDVTVAEEVITKTWDTNVITPGTPFMDILALALRYWVAYKLSTDP----- 191
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
W+ + VI+S PGEGEHKIM++IR ++ P+Y+PN RH +YGLDADLIMLGL
Sbjct: 192 ----GWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYGLDADLIMLGLG 247
Query: 286 THEPYFSLLREEVKFN---TKSNKGGSQIVTPEET----------------------KFF 320
THEP+F +LRE+V F ++ K Q EE F
Sbjct: 248 THEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKRGEFDEKQKGNPLKPFI 307
Query: 321 LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIING 380
LH+S++R+YL +E ++P FPF +E +DDWV M F +GNDF+P+LP L I
Sbjct: 308 WLHVSVLREYLAVEMQVPQQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLEIREN 363
Query: 381 ALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
+ L ++++ +P + GY+ + G ++L + + L LA
Sbjct: 364 GIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLA 402
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 102/141 (72%)
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D +++++ G PF PF+QL+
Sbjct: 606 ARAYVEGLSWVLLYYFQGCPSWTWYYPYHYAPFAADFVDIGKMDVQFTKGTPFKPFEQLM 665
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
VLPAAS +PE +++LM+ ENS I+++YPE+F DLNGKK W+ V L+PFIDE +L+
Sbjct: 666 GVLPAASNHAIPEVFRDLMSDENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLL 725
Query: 650 KAMDAVEHLLTDEERSRNRHG 670
AMD HLL++EE++RN G
Sbjct: 726 AAMDKRYHLLSEEEQARNAMG 746
>gi|145515211|ref|XP_001443505.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410894|emb|CAK76108.1| unnamed protein product [Paramecium tetraurelia]
Length = 1303
Score = 242 bits (618), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 285/557 (51%), Gaps = 73/557 (13%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P++L F+A DGVAPRAKMNQQR RRF+S K + L ++ G + + +N +PG
Sbjct: 78 PQQLLFLAFDGVAPRAKMNQQRQRRFQSQKRYKYLSAHLQQIG-LFQKNETYKNNQFSPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L+QQ++++++ K + D +K++ +I SG + PGEGEHK++ +IR
Sbjct: 137 TEFMTQLNQQIKFYIERKYSEDP---------KFKNLKIIFSGCDVPGEGEHKLLSFIRN 187
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
++ +PN H +YG DADLIMLGL T ++RE++KF ++ +++V E
Sbjct: 188 LQC----DPNSVHMIYGADADLIMLGLLTQLKNVLIIREDLKFKQTASAAANRVVKIPE- 242
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F ++++S++R+YL+LEF LK+ + P+ I IIDD++L+ F +GNDF+P + I
Sbjct: 243 -FLVINISIVREYLDLEFAVLKDK--MKVPYDINRIIDDFILLCFFVGNDFLPRIFCFDI 299
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD-IQYL 436
G + L +++ L + Y+ G +N K L L F+ ++ + + YL
Sbjct: 300 RIGTIEPLVDLFKNHLTNANDYLVHRGDINYKELISLLDLLQGFEKLCINDRQQEMLNYL 359
Query: 437 EGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEW 496
K + V KEK E+++ N +Y+ E E
Sbjct: 360 NTKHQNR--QVIAKEK------------------------ELID--NILKYFSLQEQTEG 391
Query: 497 RTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYP 556
R ++ Q D +LD K L D Y+ I + L YY+ G SW WYY
Sbjct: 392 RKFYYKAKCQITKD---DELDLDK-----LGDMCVNYMEGIYFVLQYYFKGVPSWEWYYK 443
Query: 557 HHYAPYISDIKD-----FSHLNLKYE-----MGEPFLPFQQLLAVLPAASKELLPEPYQN 606
++YAP D+ L K E GEP+ PF+QLL++L + +LLPEPY
Sbjct: 444 YYYAPLCGDLVGVVSNMVKQLQDKEEPILLTKGEPYPPFKQLLSILTPENAQLLPEPYGR 503
Query: 607 LMTLENSPIL----EYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDE 662
L+T + + IL +YYPE F TD G + + + IPF+D K ++ + + D
Sbjct: 504 LLTDKENSILRTPIDYYPENFETDSYGTMYEHQHITKIPFLD----CKIVEEAYNSVPDT 559
Query: 663 ERSRNRHGPMLVYTYSN 679
+ RN+ + Y Y +
Sbjct: 560 QDKRNQQAQSIFYQYDS 576
Score = 74.7 bits (182), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 15/103 (14%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEK- 58
MGVP F+ ++ R+P CL E R ++ D YLDMN II+ C+ DP ++
Sbjct: 1 MGVPNFYSWLMRRFPLCLYEHTRAQRV---DYFYLDMNQIIYKCA----TDPTVLFKDQL 53
Query: 59 ------QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
I+ I +Y++++ ++ P++L F+A DGVAPRAKMN
Sbjct: 54 RERDFDDIWVSILNYLDMIINLVNPQQLLFLAFDGVAPRAKMN 96
>gi|427778459|gb|JAA54681.1| Putative 5'-3' exonuclease xrn1/kem1/sep1 involved in dna strand
exchange and mrna turnover, partial [Rhipicephalus
pulchellus]
Length = 856
Score = 242 bits (618), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 236/492 (47%), Gaps = 122/492 (24%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + D + + ++ + PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIVAHCVEEKPQVVDGVKIPVD-----TTKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDM---NGIIHPCCHP----------------------------------ENKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE-AEVLEQKAK 177
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE AE +E+ ++
Sbjct: 75 DEMMVDIFEYIDRIFSVVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKESAEKVEEMSR 134
Query: 178 ------EKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
++G LP EK FDSNCITPGTPFM RL + L Y++ ++ D
Sbjct: 135 IRAELRDRGVPLPPEKDKSEHFDSNCITPGTPFMDRLAKCLHYYIHDRLNNDP------- 187
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
WK++ VILS PGEGEHKIMD+IR ++ P ++PN HCL G DADLIMLGL TH
Sbjct: 188 --GWKNIQVILSDANVPGEGEHKIMDFIRRQRANPKHDPNTHHCLCGADADLIMLGLATH 245
Query: 288 EPYFSLLREEVKFN--------------TKSNKGGSQIVTPE------------------ 315
EP F+++REE K N K +G + T E
Sbjct: 246 EPNFTIIREEFKPNQPRPCELCGQLGHEMKDCQGLPKEKTGEFDELEKPIGSETEFIFLX 305
Query: 316 ------------------ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDW 357
ET+F L L+++ +YLE E P F F+IE IDDW
Sbjct: 306 XPKEKTGEFDELEKPIGSETEFIFLRLNVLHEYLERELRMDNLP----FDFNIERAIDDW 361
Query: 358 VLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTK 417
V M F +GNDF+P+LP L I GA+ L +Y++ + GY+ E G++ L R + +++
Sbjct: 362 VFMCFFVGNDFLPHLPSLEIREGAIDRLVNLYKKAVYRTGGYLTENGFVALNRVQLIMSE 421
Query: 418 LASFDFEQFREK 429
L + E F+ +
Sbjct: 422 LGDAEDEIFKRR 433
Score = 148 bits (373), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 94/146 (64%), Gaps = 1/146 (0%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K D + D A Y+ + W L YYY GC SW W++P+HYAP+ SD +
Sbjct: 559 YYVSKFDISPDNVAFRHDVASAYVEGLCWVLRYYYQGCASWKWFFPYHYAPFASDFINVG 618
Query: 571 HLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNG 629
L +++E G +PF P +QL++V PAASK+ LP P+ +LM +SPI+++YP +F DLNG
Sbjct: 619 DLKIEFERGTQPFKPMEQLMSVFPAASKQHLPLPWADLMDDPDSPIIDFYPTDFKIDLNG 678
Query: 630 KKQDWEAVVLIPFIDEVKLIKAMDAV 655
KK W+ V L+PF+DE +L++ + V
Sbjct: 679 KKYAWQGVALLPFVDEKRLLETVQTV 704
Score = 100 bits (249), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 77/132 (58%), Gaps = 16/132 (12%)
Query: 580 EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVL 639
+PF P +QL++V PAASK+ LP P+ +LM +SPI+++YP +F DLNGKK W+ V L
Sbjct: 711 QPFKPMEQLMSVFPAASKQHLPLPWADLMDDPDSPIIDFYPTDFKIDLNGKKYAWQGVAL 770
Query: 640 IPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT------YS----------NVNLG 683
+PF+DE +L++ + V LT++ER RN G + Y YS + N+
Sbjct: 771 LPFVDEKRLLETVQTVYPHLTEDERKRNTRGDDVFYVRKGHRGYSYLVGLYEACKDYNME 830
Query: 684 TALAPDYFPAIN 695
L P YF I
Sbjct: 831 FDLEPKYFSGIG 842
>gi|33337899|gb|AAQ13577.1|AF152169_1 DHP protein [Homo sapiens]
Length = 950
Score = 242 bits (618), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 162/469 (34%), Positives = 230/469 (49%), Gaps = 96/469 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S + P + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKCPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPR KMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRVKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK++ VILS PGEGEHKIMDYIR +++P+++PN HCL G DADLIML
Sbjct: 187 -GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLAFPHMN 245
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 246 PNFTIIREEFKPNRPKPCGLCNQFGHEVKDCEGLSREKKGKHDELADSLPCAEGEFIFLR 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+Y+E E L F F +E IDDWV M F +GNDF+P+LP L I A+
Sbjct: 306 LNVLREYVERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAID 361
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 362 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 410
Score = 157 bits (396), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 517 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 576
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ ++ ++E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 577 GIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 636
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 637 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 686
>gi|322709893|gb|EFZ01468.1| 5'->3' exoribonculease Dhp1 [Metarhizium anisopliae ARSEF 23]
Length = 930
Score = 242 bits (617), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/336 (40%), Positives = 190/336 (56%), Gaps = 61/336 (18%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA--------KEKGERLP----- 184
P+KL +A+DGVAPRAKMNQQR RRFRSA++A+ E+ ++ G LP
Sbjct: 95 PRKLLMIAVDGVAPRAKMNQQRSRRFRSAQDAKEKEENKKELLKLVKQQNGGVLPPDHIE 154
Query: 185 --TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHE 242
+K FD+N ITPGTPFM L LRY+ + K+ TD W + V++S
Sbjct: 155 SVAKKVFDNNSITPGTPFMDILAVSLRYWCQYKLNTDP---------AWAKMKVLISDAT 205
Query: 243 TPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF-- 300
PGEGEHKIM +IR ++ P+Y+PN RH +YGLDADLIMLGL THEP+F +LRE+V F
Sbjct: 206 VPGEGEHKIMSFIRSQRASPEYDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQE 265
Query: 301 ---------------------------NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLEL 333
+ +K G+ + P F LH+S++R+YL
Sbjct: 266 GRARTCQLCGQKGHEARNCRGEAKEKADDVDDKPGNVTLKP----FIWLHVSVLREYLAA 321
Query: 334 EFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVL 393
E L PG L F F +E IDDWV M +GNDF+P+LP L I + L +++ L
Sbjct: 322 E---LAVPG-LPFRFDLERAIDDWVFMCCFVGNDFLPHLPALEIREHGIDTLTTIWRNNL 377
Query: 394 PTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
PT+ GY+ + G+++L+R ++ L LA + E F+ +
Sbjct: 378 PTMGGYVTKDGHIDLERAQRILDGLAKQEDEIFKRR 413
Score = 159 bits (402), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 496 WRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYY 555
W + + Q K +H D +EV R Y+ + W L YY+ GC SW WYY
Sbjct: 567 WEDGYADRYYQQK---FHRSPDDISFRHEVAR----AYVEGLAWVLLYYFQGCPSWEWYY 619
Query: 556 PHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPI 615
P+HYAP+ +D KD +++++ +E G PF+QL++VLPAAS+ LPE + LMT E+S I
Sbjct: 620 PYHYAPFAADFKDLANMDIIFEKGRVSKPFEQLMSVLPAASRHALPEVFHPLMTDEDSEI 679
Query: 616 LEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
+++YPE+F DLNGKK W+ V L+PFID +L+ A+ LL+ E +RN G
Sbjct: 680 IDFYPEDFEVDLNGKKMAWQGVALLPFIDMPRLLAAVQTKYPLLSSAEAARNATG 734
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 24/129 (18%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ---------IP-----------EFDNLYLDMNGII 40
MG+P FR++S +YP + V E Q +P EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEDQPVVMPDGSIVPVDTSSRNPNGEEFDNLYLDMNGIV 60
Query: 41 HNCSHPNDN-DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
H CSHP D P E+ + ++F Y + + M++P+KL +A+DGVAPRAKMNQQR
Sbjct: 61 HPCSHPEDKPAPE---DEEAMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRS 117
Query: 100 RRFRSAKEA 108
RRFRSA++A
Sbjct: 118 RRFRSAQDA 126
>gi|402074937|gb|EJT70408.1| 5'-3' exoribonuclease 2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1040
Score = 242 bits (617), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/472 (32%), Positives = 231/472 (48%), Gaps = 102/472 (21%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+P FR++S +YP + V E + E D D I + + PN N F
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDKPIEMD----DGTVIPVDTAKPNPNGEEF------- 49
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
++ ++G+ + R K++ E
Sbjct: 50 ------------------DNLYLDMNGIVHPCAHPEDR--------------PAPKDEEE 77
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+ R+ + P+K+ +A+DGVAPRAKMNQQR RRFRSA+EA+ +KA++K
Sbjct: 78 MMLEIFRYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRFRSAQEAK---EKAEDKM 134
Query: 181 ERLP------------------TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
E L T+K FD+N ITPGTPFM L LRY+ K+ TD
Sbjct: 135 ELLKLLKQQNGGDVAPETLESVTKKAFDTNSITPGTPFMLILAASLRYWCAYKLNTDP-- 192
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
W ++ +I+S PGEGEHKIMD++R +S PD++PN RH +YGLDADLIML
Sbjct: 193 -------AWANLKIIISDATVPGEGEHKIMDFVRSQRSSPDHDPNTRHVIYGLDADLIML 245
Query: 283 GLCTHEPYFSLLREEV---------------------KFNTKSNKGGSQIVTPEETK--- 318
GL THEP+F +LRE+V ++ K + E+ +
Sbjct: 246 GLATHEPHFRVLREDVFAQQGKARMCKLCGQKGHDAQNCRGEAKKKEGEFDEKEKAEPLK 305
Query: 319 -FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F LH+S++R+YL +E E L F F +E +DDW+ + +GNDF+P+LP L I
Sbjct: 306 PFIWLHVSVLREYLAVEL----EVSNLPFRFDLERAVDDWIFLCCFVGNDFLPHLPALEI 361
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
+ L +++ L T+ GY+ + G+++L+R + + LA + FR++
Sbjct: 362 RENGINTLTNIWKRNLATMGGYVTKDGHIDLERIQVIMNGLAQQEDSIFRKR 413
Score = 154 bits (388), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 98/141 (69%)
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
A Y+ + W L YY+ GC SW WYYP+HYAP+ +D + + L + +E G P++QL+
Sbjct: 597 AHAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFQGLADLKISFEKGRTSRPYEQLM 656
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
+VLPAAS++ LP + +LMT E+S I+++YPE+F DLNGKK W+ VVL+PFI+ +L+
Sbjct: 657 SVLPAASRDNLPPVFHDLMTNEDSEIIDFYPEDFELDLNGKKFAWQGVVLLPFIEMDRLL 716
Query: 650 KAMDAVEHLLTDEERSRNRHG 670
A++A LLT EE +RN G
Sbjct: 717 AAVEAKYPLLTPEEAARNGVG 737
>gi|298713655|emb|CBJ33698.1| putative 5\'-3\' exoribonuclease (XRN3) [Ectocarpus siliculosus]
Length = 708
Score = 242 bits (617), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/349 (39%), Positives = 206/349 (59%), Gaps = 52/349 (14%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVL-------EQKAKE 178
D+I F P++L ++AIDGVAPRAKMNQQR RRFRSA+EAE Q KE
Sbjct: 82 MDYIDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKE 141
Query: 179 KGERLPTEKR--FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCV 236
G ++P + + +DSN ITPGT FM +L + LR++V+ ++ DK W+++ V
Sbjct: 142 MGVKVPPKAKPAWDSNIITPGTEFMHKLSRYLRFYVQDRVNRDK---------AWQNIKV 192
Query: 237 ILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLRE 296
ILS PGEGEHKIMD++R +++P Y+PN H L+GLDADLIMLGL THE F++LRE
Sbjct: 193 ILSDASEPGEGEHKIMDFVRRQRTQPGYDPNQHHILHGLDADLIMLGLATHERSFTILRE 252
Query: 297 EVKFNTKSNKGGSQI-----------------------------VTPEETKFFLLHLSLM 327
+V F + + + V+P + +L L +
Sbjct: 253 QVLFGRQQKEASERKAAAMNAARDALAGVGQKAKRGEHGEHDGDVSPHKP-LQMLQLWTL 311
Query: 328 RDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYK 387
R+YLE EF +L+ PG + F + E ++DD+V + F +GNDF+P+LP L I +GAL L+
Sbjct: 312 REYLENEFKELEAPGRVPFGYDFERVVDDFVFLCFFVGNDFLPHLPSLGIRDGALDYLFN 371
Query: 388 VYQEVLPTLDGYIN-EGGYLNLKRFEKFLTKLASFDFEQF-REKYADIQ 434
VY+ V+ +L Y+ GG +NLK+ + ++++ + E F R K A+++
Sbjct: 372 VYKRVISSLGDYLTASGGRVNLKQVDVIMSEVGEIEDEVFKRRKQAEVK 420
Score = 120 bits (301), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 94/149 (63%), Gaps = 28/149 (18%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP-----------EFDNLYLDMNGIIH 41
MGVP F+R++SE+YP + + V +IP EFDNLY+DMNGIIH
Sbjct: 1 MGVPAFYRWLSEKYPKIVVDMLEDHAARVEGTEIPLDLTAENPNGIEFDNLYIDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
CSHP D P +E++++++I YI+ LF ++P++L ++AIDGVAPRAKMNQQR RR
Sbjct: 61 PCSHPEDKPPP--ESEEEMYKNIMDYIDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEVL-------EQKAKEKGERLP 123
FRSA+EAE Q KE G ++P
Sbjct: 119 FRSAQEAEEAAELMEETRQAMKEMGVKVP 147
Score = 60.8 bits (146), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQA-ECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI 566
K YYH K + R++ + Y+ + W + YYY GC SW+WY+P HYAP+ SD+
Sbjct: 644 KDRYYHDKCKLEDIEGGGGRERLFQTYVEGLCWVMLYYYQGCPSWTWYFPFHYAPFASDL 703
>gi|300176532|emb|CBK24197.2| unnamed protein product [Blastocystis hominis]
Length = 1028
Score = 241 bits (615), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 157/466 (33%), Positives = 237/466 (50%), Gaps = 94/466 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MGVP F++++++YP + V E+ D LY I + S PN N F
Sbjct: 1 MGVPTLFKWLAKKYPKSIMNCVEEFGT-MVDGLY-----IPPDVSLPNPNGIEF------ 48
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
F++ ++G+ N+ + ++K+
Sbjct: 49 -------------------DNFYIDMNGIIHNCSHNEGLDKVPETSKDT----------- 78
Query: 120 ERLPTEKRFDFITLKF--CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 177
E F ++ F P+KL ++A+DGVAPRAKMNQQR RRF + +E + +
Sbjct: 79 ----FENMFMYLDRLFEIVRPRKLIYLAVDGVAPRAKMNQQRSRRFSAFQERQDRKDAED 134
Query: 178 EKGERL---------PTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
E R+ P FDSN ITPGT +M + LR+++ +++ +
Sbjct: 135 EIRSRMLAAGKKVPPPRTSSFDSNKITPGTEYMMEICDNLRWYIADRMSHNP-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
W++V VILS PGEGEHKIMDYIR +++P Y+PN +H ++GLDADLIMLGL THE
Sbjct: 187 -AWQNVTVILSDGSVPGEGEHKIMDYIRRERAQPGYDPNTKHIIHGLDADLIMLGLATHE 245
Query: 289 PYFSLLREEVKFNT-------------------KSNKGGSQIVTPEETKFF-----LLHL 324
YF +LREEV +T + K + E+K+ +L L
Sbjct: 246 AYFYILREEVTSSTLQVTRCALCGSDGHLAAQCQGKKPQPRGALTRESKYMKQPLQILQL 305
Query: 325 SLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPL 384
++R+YL+ EFG L+ V+SFP+ E+++DD VL+ FL+GNDF+P LP L I GAL L
Sbjct: 306 PVLREYLQGEFGLLER--VISFPYDFEHVLDDIVLLCFLVGNDFLPRLPCLSIREGALDL 363
Query: 385 LYKVYQEVLPTLDGYIN-EGGYLNLKRFEKFLTKLASFDFEQFREK 429
L+ +Y+ +LP GY+ +GG ++L R + +LA + E R +
Sbjct: 364 LFNLYKSILPAERGYLTADGGKIDLPRLHRIFEELAKVEGEILRRR 409
Score = 125 bits (313), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 101/189 (53%), Gaps = 10/189 (5%)
Query: 493 DEEWRTNFFSE-FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSW 551
+E W+ ++ E F + D +LD A R Y+ ++W + YYY GC SW
Sbjct: 569 EEGWKQRYYREKFCRKPGD----RLDGA-----FYRSICTSYVEGLRWIMLYYYKGCPSW 619
Query: 552 SWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLE 611
W++P H+AP S + +FS+ ++ G+PF P QL+A P LLP+P+Q LMT
Sbjct: 620 DWFFPFHFAPCASTLAEFSYEATPFKEGKPFRPLDQLMANQPPGCAYLLPKPFQELMTSP 679
Query: 612 NSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGP 671
NSPI ++YP+ D +G W LI FID+ +L+ A+D+V LT + RN G
Sbjct: 680 NSPIRDFYPKRIEYDTDGLPFRWLWTALISFIDKDRLLAAIDSVMDQLTPADLIRNHVGV 739
Query: 672 MLVYTYSNV 680
L+ ++
Sbjct: 740 DLLCVRRSI 748
>gi|116204849|ref|XP_001228235.1| hypothetical protein CHGG_10308 [Chaetomium globosum CBS 148.51]
gi|115311955|sp|Q2GNZ6.3|XRN2_CHAGB RecName: Full=5'-3' exoribonuclease 2
gi|88176436|gb|EAQ83904.1| hypothetical protein CHGG_10308 [Chaetomium globosum CBS 148.51]
Length = 1039
Score = 241 bits (614), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 160/471 (33%), Positives = 234/471 (49%), Gaps = 99/471 (21%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MG+P FR++S +YP +S VV E + D + ++ + PN N F
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVVEEKALVMEDGTVVPVD-----ATQPNPNGEEF------ 49
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
++ ++G+ + R + E E++ + K
Sbjct: 50 -------------------DNLYLDMNGIVHPCSHPEDRPA---PSDEEEMMVEVFKY-- 85
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAI-DGVAPRAKMNQQRGRRFRSAKEA--------E 170
TE+ + + P+KL +A+ DGVAPRAKMNQQR RRFR+A++A +
Sbjct: 86 ----TERVVNMVR-----PRKLLMIAVADGVAPRAKMNQQRSRRFRAAQDAKEKEEDKQQ 136
Query: 171 VLEQKAKEKGERLPTE-------KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWK 223
+L+ KEKG E K FDSN ITPGTPFM L LRY+ K+ TD
Sbjct: 137 LLKMLQKEKGSTAKEEPIETVVKKAFDSNSITPGTPFMDILAASLRYWCAYKLNTDP--- 193
Query: 224 DTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLG 283
W + VI+S PGEGEHKIM+++R ++ P+++PN RH +YGLDADLIMLG
Sbjct: 194 ------AWAKMKVIISDATVPGEGEHKIMEFVRSQRNSPEHDPNTRHVIYGLDADLIMLG 247
Query: 284 LCTHEPYFSLLREEVKFNTK--------SNKGGSQIVTPEETK----------------- 318
L THEP+F +LRE+V F KG + E K
Sbjct: 248 LATHEPHFRVLREDVFFQQGKARMCKLCGQKGHDERNCRGEAKEKAGEFDEKDKAEPLKP 307
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
F LH+S++R+YL +E L P L F + +E IDDWV M F +GNDF+P+LP L I
Sbjct: 308 FIWLHVSILREYLAIE---LNIPN-LPFRWDLERAIDDWVFMCFFVGNDFLPHLPALEIR 363
Query: 379 NGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
+ L ++++ LP + GY+ + G+++L R + L+ LA + FR +
Sbjct: 364 ENGIETLMAIWKDNLPVMGGYVTKDGHVDLDRAQYILSGLAKQEDSIFRRR 414
Score = 166 bits (419), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 129/224 (57%), Gaps = 5/224 (2%)
Query: 450 KEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKT 509
KE++ E +AL K + ++GT + A+ E + EE + + +
Sbjct: 519 KEENPEAKTPPSALGKRKAELIEEGTATASDAASDTETPATTSSEEGPIDTVRLWEEGYA 578
Query: 510 DYYH---YKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI 566
D Y+ +K+D + A Y+ + W L YY+ GC SW W+YP+HYAP+ +D
Sbjct: 579 DRYYEQKFKVDAKDIA--FRHKVARAYVEGLAWVLMYYFQGCPSWEWFYPYHYAPFAADF 636
Query: 567 KDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
D + + +E G PF+QL++VLPAAS+ +PE + +LMT E+SPIL++YPE+F D
Sbjct: 637 VDLGKMKISFEKGRISRPFEQLMSVLPAASRHAIPEVFHDLMTQEDSPILDFYPEDFEID 696
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
LNGKK W+ + L+PFI+ +L+ AM HLL+ E+++RN G
Sbjct: 697 LNGKKMSWQGIALLPFIEMPRLLDAMKTKSHLLSAEDKARNAPG 740
>gi|407040013|gb|EKE39937.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 560
Score = 239 bits (611), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 133/304 (43%), Positives = 182/304 (59%), Gaps = 40/304 (13%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLE-QKAKEKGERL-------PTEKRF 189
P+KL ++A+DGVAPRAKMNQQR RRF+SAK+AE E ++A++ +RL P K
Sbjct: 88 PRKLLYLAVDGVAPRAKMNQQRSRRFKSAKDAENAELRQAEDNKKRLMNGLPEVPYVKPL 147
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSNCITPGT FM + + L+ ++K +++ W + VILS PGEGEH
Sbjct: 148 DSNCITPGTEFMSVVSKTLKKYIKERMSQSS---------YWNKLVVILSDSGVPGEGEH 198
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGS 309
KIMD+IR K PDYNPN HC+YGLDADLIML L THE +FS++RE+V F +
Sbjct: 199 KIMDFIRRQKESPDYNPNTHHCMYGLDADLIMLSLATHERFFSIIREKVFFEDDRCYICN 258
Query: 310 QIVTPEETK--------------FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIID 355
+ P++ + F LH ++R YL++ LK G F E +D
Sbjct: 259 GVHPPDKCQRRKEVGAMDTIIKPFQFLHCHILRGYLQI---TLKVEG-----FEFERCVD 310
Query: 356 DWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFL 415
D++ FL+GNDF+P++P L I +GA+ LL KVY+E LP GYI E G LN+ + FL
Sbjct: 311 DFIFFCFLVGNDFLPHIPSLDIRDGAVDLLMKVYREFLPH-GGYITESGSLNVTNAKNFL 369
Query: 416 TKLA 419
++
Sbjct: 370 QEVG 373
Score = 108 bits (269), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 85/136 (62%), Gaps = 16/136 (11%)
Query: 1 MGVPKFFRYISERYP-----CLSEVVREY--------QIPEFDNLYLDMNGIIHNCSHPN 47
MGVP FFR++ +R+P C +Y E+DN Y+DMNG+IH C HP
Sbjct: 1 MGVPSFFRWLKQRFPKIIVDCKPSSQEKYGDLNEPNASGVEYDNFYIDMNGLIHPCFHPQ 60
Query: 48 DNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE 107
D +I + + + Y++ + +++P+KL ++A+DGVAPRAKMNQQR RRF+SAK+
Sbjct: 61 DRQSPEKIEDMMVL--LTRYLDYIIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFKSAKD 118
Query: 108 AEVLE-QKAKEKGERL 122
AE E ++A++ +RL
Sbjct: 119 AENAELRQAEDNKKRL 134
>gi|157138197|ref|XP_001664171.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108880656|gb|EAT44881.1| AAEL003800-PA [Aedes aegypti]
Length = 958
Score = 239 bits (610), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 167/464 (35%), Positives = 236/464 (50%), Gaps = 94/464 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDN-LYLDMNGIIHNCSHPNDNDPHFRITEK 58
MGVP FFR++S +YP + E V + Q E N LY DM + PN N F
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECVEQKQTDEHGNPLYDDM-------TQPNPNKVEF----D 49
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
++ D+ I+ P+ D AP K+ + + E
Sbjct: 50 NLYLDMNG---IIHPCTHPE-------DKPAP---------------KDEDEMMVAIFEC 84
Query: 119 GERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE-------AEV 171
+RL + P+KL +MAIDGVAPRAKMNQQR RRFR++KE +
Sbjct: 85 IDRL----------MNIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKEAAEKAAEVQK 134
Query: 172 LEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
+ + + KG LP EK FDSNCITPGTPFM RL + L+Y+V ++ +
Sbjct: 135 IRDELRAKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYVHDRMNNNP------- 187
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
WK + +ILS PGEGEHKIMDYIR +++PD++PN H L G DADLIMLGL TH
Sbjct: 188 --GWKGLKIILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLIMLGLATH 245
Query: 288 EPYFSLLREEVKFNTKSNKGGSQIVTPE----------------------ETKFFLLHLS 325
E +F+++REE N + QI+ E ET++ + L+
Sbjct: 246 ETHFTIIREEFLPNKERPCDICQIMGHEMKDCTGLQSERDINRTPPPPGAETQYIFVRLN 305
Query: 326 LMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLL 385
++++YL E L P L F + E +IDDWV M F +GNDF+P+LP L I A+ L
Sbjct: 306 VLKEYLAKE---LDMPN-LPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRL 361
Query: 386 YKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
+Y++ + GY+ + G + + R E +T L + E FR++
Sbjct: 362 VTLYKKCVYKTKGYLTDSGSVTVDRVELIMTDLGYAEDEIFRQR 405
Score = 170 bits (430), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 112/201 (55%), Gaps = 7/201 (3%)
Query: 475 TEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYI 534
+E L A EE DE W F K YY K D A + + A Y+
Sbjct: 490 ADEPLTPAAVEEAETPDEVRLWEDGF-------KDRYYESKFDVAPQNMKFRQTVAWEYV 542
Query: 535 RAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPA 594
R + W L YYY GC SW WY+P+HYAP+ SD K S++N ++ G PF P QQL+ V PA
Sbjct: 543 RGLCWVLKYYYQGCASWEWYFPYHYAPFASDFKGLSNVNTHFDRGTPFKPLQQLMGVFPA 602
Query: 595 ASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDA 654
AS+ +P + LM SPI+++YP +F DLNGKK W+ V L+PF+DE +L KA D
Sbjct: 603 ASRNHVPPAFAELMVDPKSPIIDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRLFKATDP 662
Query: 655 VEHLLTDEERSRNRHGPMLVY 675
LT EER RN +G +Y
Sbjct: 663 KVPSLTHEERLRNENGLARLY 683
>gi|326435791|gb|EGD81361.1| hypothetical protein PTSG_11834 [Salpingoeca sp. ATCC 50818]
Length = 1592
Score = 239 bits (609), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 162/275 (58%), Gaps = 58/275 (21%)
Query: 23 EYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFF 82
E+ EFDNLYLDMNGIIH C HP D +P TE+ + + IF YI+ +F +++P++L +
Sbjct: 314 EHDGIEFDNLYLDMNGIIHPCCHPEDREPP--ATEEAMMEAIFEYIDHVFTLVRPRRLLY 371
Query: 83 MAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLF 142
+AIDGVAPRAKMNQQR RRFRSA+EAE K K++
Sbjct: 372 LAIDGVAPRAKMNQQRARRFRSAQEAE----------------------DRKRVIEKRVE 409
Query: 143 FMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMC 202
+ DGVAP+ Q K+K FDSNCITPGTPFM
Sbjct: 410 ALEADGVAPK------------------YYYQVTKKK-------MSFDSNCITPGTPFMA 444
Query: 203 RLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKP 262
RL Q+LR ++ ++ ++ WKDV VILS PGEGEHKIMD+IR +S P
Sbjct: 445 RLAQRLREYIDDRLHSNA---------AWKDVQVILSDASVPGEGEHKIMDFIRQQQSLP 495
Query: 263 DYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE 297
Y+PNMRH LYG DADLIMLGL THEP+F ++REE
Sbjct: 496 SYDPNMRHVLYGADADLIMLGLATHEPHFYIIREE 530
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 93/168 (55%), Gaps = 4/168 (2%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK--D 568
YY K + A LRD A Y + W + YY+ GC SWSWYY +HYAP+ SD D
Sbjct: 1223 YYRKKFESAASGATFLRDLATAYTEGVCWVMLYYFQGCPSWSWYYKYHYAPFCSDFAALD 1282
Query: 569 FSHLNLKY-EMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDL 627
++L + + PF P +QL+ V P AS LP + LMT S + +YP F DL
Sbjct: 1283 MDTVSLPFPDDSTPFRPLEQLMGVFPPASSSFLPARWAKLMT-GKSAVSRFYPSSFRVDL 1341
Query: 628 NGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
NGKK W+ V L+PF+DE L+ A+D V LT EE RN G L++
Sbjct: 1342 NGKKYAWQGVTLLPFMDEDVLLTALDRVYPSLTGEEAHRNAFGHDLLF 1389
Score = 76.3 bits (186), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Query: 319 FFLLHLSLMRDYLELEF-----GKLKEPGVLSFPFSIEN--IIDDWVLMGFLIGNDFIPN 371
F L+ + +R L+ EF ++ G F + ++DDWVL+ L+GNDF+P+
Sbjct: 761 FLLVDIPALRRCLQAEFTGGGNDARRQSGRERFKMNERGARMVDDWVLLCCLVGNDFLPH 820
Query: 372 LPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYA 431
LP L I GA+ L ++Y + +L G++++ G++NL R FL +L + + R+++
Sbjct: 821 LPSLSIHEGAIDTLTRLYATMQRSLGGFLHDNGHVNLPRLGMFLARLGTMEDHVIRQRFV 880
Query: 432 D 432
+
Sbjct: 881 E 881
>gi|440299483|gb|ELP92037.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 661
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 174/553 (31%), Positives = 267/553 (48%), Gaps = 95/553 (17%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+KL ++A+DGV P AK+ QQR RR+ SA R + FDSNCITPG
Sbjct: 86 PRKLVYIAVDGVCPFAKIVQQRKRRYISA---------------RGNSGTSFDSNCITPG 130
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
TPFM RL L +V ++ T+ W + VILS PGEGEHKI D++R
Sbjct: 131 TPFMERLSVALHAYVTNRMDTN---------LYWSSLSVILSNPNVPGEGEHKIFDFLRK 181
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF------------NTKSN 305
D+ N++HC+YG+DADLIML L ++ P+ ++REE++F N ++N
Sbjct: 182 ESKNTDF-ANLKHCVYGMDADLIMLTLASNLPFVYIIREEMEFTKPNIICDVCHLNHRTN 240
Query: 306 KGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIG 365
+ G + L +++ +L E K E + S +I+D+VL+ FL+G
Sbjct: 241 QHGKPV------NLILCDPNVLSTWLITECAKTCEMKMEDI--SRVELINDFVLITFLVG 292
Query: 366 NDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQ 425
NDF+P +P L + +G + ++ K Y + EG K LT + +
Sbjct: 293 NDFLPKIPSLKVQSGGMEIILKYYWPLF-------KEG---------KRLTNGININLHL 336
Query: 426 FREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYE 485
+E +A I E ++ K V +KS+E+ A L +D +++ Y
Sbjct: 337 LKEMFAKITTEESELLKMV--VRTTKKSQEVKQYDAGLY------FDSADTIMIHTQGYH 388
Query: 486 EYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYY 545
YY + FG+ YK ++ E YI + W YY
Sbjct: 389 TRYYD-----------THFGKANNTENFYK----QIVGE--------YIEGLFWVFQYYT 425
Query: 546 NGCVSWSWYYPHHYAPYISDIKDFSHLNLK--YEMGEPFLPFQQLLAVLPAASKELLPEP 603
G SW W+YP HYAP+ DI + LN + +E EP LP +QL++VLP S +P
Sbjct: 426 VGVPSWRWFYPEHYAPFAEDIYKYIDLNQEGLFEPDEPILPMEQLISVLPPQSFNNIPST 485
Query: 604 YQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAM-DAVEHLLTDE 662
+L+ + SPIL Y+ F TD+NG+ + ++ V + FID K+ + + + + L E
Sbjct: 486 LASLVVSKQSPILNYFNTTFRTDINGEAKLFKGVPQLDFIDLSKIEELVAERMAELKGRE 545
Query: 663 ERSRNRHGPMLVY 675
R +R+G L+Y
Sbjct: 546 MRRNSRYGENLLY 558
Score = 80.9 bits (198), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 19/120 (15%)
Query: 1 MGVPKFFRYISERYPC------LSEVVREYQIPE-------FDNLYLDMNGIIHNCSHP- 46
MGVP FF ++ C L + ++E + E FD ++D NGI+HNCSHP
Sbjct: 1 MGVPSFFAWVCSM--CKDYTKYLPKNIQEDDLREQNHCGRDFDTFFIDFNGIVHNCSHPA 58
Query: 47 NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 106
+D P ++E ++F IF ++ ++P+KL ++A+DGV P AK+ QQR RR+ SA+
Sbjct: 59 HDVAP---VSEAELFDRIFAQLDHYINYVRPRKLVYIAVDGVCPFAKIVQQRKRRYISAR 115
>gi|358342156|dbj|GAA49686.1| 5'-3' exoribonuclease 2 [Clonorchis sinensis]
Length = 314
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/322 (43%), Positives = 178/322 (55%), Gaps = 82/322 (25%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIP---------------------EFDNLYLDMNGI 39
MGVP FFR++S +YP + E + P EFDNLYLDMNGI
Sbjct: 1 MGVPAFFRWLSMKYPSIVSHCVEKRGPILDNQGTRGPVDTTEPNPNGQEFDNLYLDMNGI 60
Query: 40 IHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
IH C+HP ++ P + E ++F IF YI+ LF +I+P+++ +MAIDGVAPRAKMNQQR
Sbjct: 61 IHPCTHP-ESKPAPK-NEAEMFVAIFEYIDRLFAIIRPRRILYMAIDGVAPRAKMNQQRS 118
Query: 100 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQR 159
RRFR+AKE AKEK M +R
Sbjct: 119 RRFRAAKE-------AKEK-----------------------------------HMTIER 136
Query: 160 GRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTD 219
R A+ A + K++ E+ FDSNCITPGTPFM RL LRY++ ++ +D
Sbjct: 137 LRNELQARGAHLPPAKSE--------EEHFDSNCITPGTPFMARLAVALRYYIYDRLNSD 188
Query: 220 KLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADL 279
WK+ + V LS PGEGEHKIMD+IR +S PD++ N RHCL G DADL
Sbjct: 189 PGWKNIM---------VFLSDANVPGEGEHKIMDFIRRQRSAPDHDANTRHCLCGADADL 239
Query: 280 IMLGLCTHEPYFSLLREEVKFN 301
IMLGL THEPYF+++REE K N
Sbjct: 240 IMLGLATHEPYFTIIREEFKPN 261
>gi|340992664|gb|EGS23219.1| hypothetical protein CTHT_0008830 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1066
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 164/460 (35%), Positives = 231/460 (50%), Gaps = 98/460 (21%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MG+P FR++S +YP +S VV E I + D I + + PN N F
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEERPI-----VMPDGTEIPVDATRPNPNGEEF----DN 51
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
++ D+ I+ P+ D AP K++
Sbjct: 52 LYLDMNG---IVHPCSHPE-------DKPAP-------------------------KDEE 76
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA--- 176
E + ++ +K P+K+ +A+DGVAPRAKMNQQR RRFR+A+EA+ E++
Sbjct: 77 EMMIEIFKYTDRIVKMVRPRKILMIAVDGVAPRAKMNQQRSRRFRAAQEAKEKEEEKKQL 136
Query: 177 -----KEKGERLPTE-------KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKD 224
KEKG + E K FDSN ITPGTPFM L LRY+ K+ TD
Sbjct: 137 LKMLRKEKGSNMQEEPLETVVKKAFDSNSITPGTPFMDILAASLRYWCAYKLNTDP---- 192
Query: 225 TLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGL 284
W + VI+S PGEGEHKIM++IR +S P++NPN RH +YGLDADLIMLGL
Sbjct: 193 -----AWAKLKVIISDATVPGEGEHKIMEFIRSQRSSPEHNPNTRHVIYGLDADLIMLGL 247
Query: 285 CTHEPYFSLLREEVKFNTK--------SNKGGSQIVTPEETK-----------------F 319
THEP+F +LRE+V F KG + E K F
Sbjct: 248 ATHEPHFRVLREDVFFQEAKARLCKLCGQKGHDERSCKGEAKQKQGEFDEKDHAQPLKPF 307
Query: 320 FLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN 379
LH+S++R+YL E L+ P L F + +E IDDWV + F +GNDF+P+LP L I
Sbjct: 308 IWLHVSILREYLAAE---LEVPN-LPFRWDLERAIDDWVFLCFFVGNDFLPHLPALEIRE 363
Query: 380 GALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
+ L ++++ LP + GY+ + G+++L+R + L LA
Sbjct: 364 NGIDTLTAIWKDNLPIMGGYLTKDGHVDLERAQYILNGLA 403
Score = 171 bits (433), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 102/160 (63%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E Y + W L YYY GC SW W+YP+HYAP+ +D D +
Sbjct: 583 YYEQKFKVDPKDIEFRHKVGRAYAEGLAWVLQYYYQGCPSWEWFYPYHYAPFAADFVDLA 642
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ +K+E G PF+QL++VLPAAS+ +PE Y +LMT NSPI+++YPEEF DLNGK
Sbjct: 643 KMEIKFEKGRISRPFEQLMSVLPAASRHAIPEVYHDLMTDPNSPIIDFYPEEFEIDLNGK 702
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V L+PFI+ +L+ AM EHLL++E+R+RN G
Sbjct: 703 KMAWQGVALLPFIEMPRLLAAMKEREHLLSEEDRARNEPG 742
>gi|322692778|gb|EFY84668.1| 5'-3' exoribonuclease 2 [Metarhizium acridum CQMa 102]
Length = 929
Score = 238 bits (606), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 134/336 (39%), Positives = 187/336 (55%), Gaps = 61/336 (18%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA--------KEKGERLP----- 184
P+KL +A+DGVAPRAKMNQQR RRFRSA++A+ E+ ++ G LP
Sbjct: 95 PRKLLMIAVDGVAPRAKMNQQRSRRFRSAQDAKEKEENKEELLKLVKQQNGGVLPPDHIE 154
Query: 185 --TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHE 242
+K FD+N ITPGTPFM L LRY+ + K+ TD W + V++S
Sbjct: 155 SVAKKIFDNNSITPGTPFMDILAVSLRYWCQYKLNTDP---------AWAKMKVLISDAT 205
Query: 243 TPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNT 302
PGEGEHKIM +IR ++ P+Y+PN RH +YGLDADLIMLGL THEP+F +LRE+V F
Sbjct: 206 VPGEGEHKIMSFIRSQRASPEYDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQE 265
Query: 303 K-----------------------------SNKGGSQIVTPEETKFFLLHLSLMRDYLEL 333
+K G+ + P F LH+S++R+YL
Sbjct: 266 GKARTCQLCGQKGHEARNCRGEAKEKAGDIDDKPGNATLKP----FIWLHVSVLREYLAA 321
Query: 334 EFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVL 393
E L P L F F +E IDDWV M +GNDF+P+LP L I + L +++ L
Sbjct: 322 E---LAVPA-LPFRFDLERAIDDWVFMCCFVGNDFLPHLPALEIREHGIDTLTTIWRNNL 377
Query: 394 PTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
PT+ GY+ + G+++L+R ++ L LA + F+ +
Sbjct: 378 PTMGGYVTKDGHIDLERAQRILDGLAKQEDAIFKRR 413
Score = 158 bits (399), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 496 WRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYY 555
W + + Q K +H D ++V R Y+ + W L YY+ GC SW WYY
Sbjct: 567 WEDGYADRYYQQK---FHRSPDDISFRHKVAR----AYVEGLAWVLLYYFQGCPSWEWYY 619
Query: 556 PHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPI 615
P+HYAP+ +D KD +++++ +E G PF+QL++VLPAAS+ LPE + LMT E+S I
Sbjct: 620 PYHYAPFAADFKDLANMDIAFEKGRVSKPFEQLMSVLPAASRHALPEVFHPLMTDEDSEI 679
Query: 616 LEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
+++YPE+F DLNGKK W+ V L+PFID +L+ A+ LL+ E +RN G
Sbjct: 680 IDFYPEDFEVDLNGKKMAWQGVALLPFIDMPRLLAAVQNKYPLLSSAEAARNARG 734
Score = 110 bits (276), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 79/129 (61%), Gaps = 24/129 (18%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ---------IP-----------EFDNLYLDMNGII 40
MG+P FR++S +YP + V E Q +P EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEDQPVVMPDGSTVPVDTTSRNPNGEEFDNLYLDMNGIV 60
Query: 41 HNCSHPNDN-DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
H C+HP D P E+ + ++F Y + + M++P+KL +A+DGVAPRAKMNQQR
Sbjct: 61 HPCAHPEDKPAPE---DEEAMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRS 117
Query: 100 RRFRSAKEA 108
RRFRSA++A
Sbjct: 118 RRFRSAQDA 126
>gi|389640341|ref|XP_003717803.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae 70-15]
gi|351640356|gb|EHA48219.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae 70-15]
Length = 1020
Score = 237 bits (605), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 161/472 (34%), Positives = 238/472 (50%), Gaps = 102/472 (21%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+P FR++S +YP + V E + E + D I + + PN N F +
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDKPVEME----DGTSIPVDITKPNPNGEEF----DNL 52
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P+ D AP+ E E++ + K
Sbjct: 53 YLDMNG---IVHPCAHPE-------DRPAPQ--------------DEEEMMLEIFKY--- 85
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE-- 178
T++ F+ + P+K+ +A+DGVAPRAKMNQQR RRFRSA+EA+ +KA++
Sbjct: 86 ---TDRVFNMVR-----PRKVLMIAVDGVAPRAKMNQQRSRRFRSAQEAK---EKAEDKL 134
Query: 179 --------------KGERLP--TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
E L T+K FD+N ITPGTPFM L LRY+ K+ TD
Sbjct: 135 ELLKLLKQQKGGDVSAETLESVTKKAFDTNSITPGTPFMDILAGSLRYWCAYKLNTDP-- 192
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
W +V +I+S PGEGEHKIMD++R +S PD++PN RH +YGLDADLIML
Sbjct: 193 -------GWANVKIIISDATVPGEGEHKIMDFVRSQRSSPDHDPNTRHVIYGLDADLIML 245
Query: 283 GLCTHEPYFSLLREEVKFNTK--------SNKGGSQIVTPEETK---------------- 318
GL THEP+F +LRE+V F KG E K
Sbjct: 246 GLATHEPHFRVLREDVFFQQGKPRLCKLCGQKGHDAQQCKGEVKKKEGEFDEKQNAEPLK 305
Query: 319 -FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F LH++++R+YL +E L P L F F +E +DDW+ + +GNDF+P+LP L I
Sbjct: 306 PFIWLHVAILREYLNVE---LYVPD-LPFRFDLERAVDDWIFLCCFVGNDFLPHLPALEI 361
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
+ L ++++ LP + GY+ + G+++L+R + + LA + FR++
Sbjct: 362 RENGIITLTSIWKQNLPRMGGYVTKDGHIDLERVQYIMDGLAKQEDSIFRKR 413
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 96/160 (60%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y+ + W L YY+ GC SW W+YP+HYAP+ D
Sbjct: 561 YYEQKFHVDPKNVEFRHKVAHAYVEGLSWVLLYYFQGCPSWEWFYPYHYAPFAQDFVGLK 620
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
L + +E G P++QL++VLPAAS++ LP + +LMT E+S I+++YPE+F DLNGK
Sbjct: 621 DLEISFEKGRKSKPYEQLMSVLPAASRDNLPPIFHDLMTKEDSEIIDFYPEDFEVDLNGK 680
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V L+PFI+ +L+ A+ A L+ +E +RN G
Sbjct: 681 KFAWQGVALLPFIEMDRLLAAVQAKYPELSADEAARNGLG 720
>gi|312075567|ref|XP_003140474.1| single-stranded RNA 5'-3' exonuclease [Loa loa]
gi|307764361|gb|EFO23595.1| single-stranded RNA 5'-3' exonuclease [Loa loa]
Length = 258
Score = 237 bits (605), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 137/183 (74%), Gaps = 11/183 (6%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT 185
F++I F P+K+FFMA+DGVAPRAKMNQQR RRF SAK A+ KA++ G ++P
Sbjct: 65 FNYINFLFGIIKPRKVFFMAVDGVAPRAKMNQQRARRFMSAKNAQEAMNKARKNGVKIPD 124
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPG 245
EK FDSNCITPGT FM RLH+QL+YFV++KITTD W+ + + LSGH PG
Sbjct: 125 EKPFDSNCITPGTHFMARLHEQLQYFVQMKITTDS---------CWQGLRIYLSGHNCPG 175
Query: 246 EGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN 305
EGEHKIMD+IR +S+ DY+ N RHCLYGLDADLIMLG+C+HEP+F+LLREEVKF + N
Sbjct: 176 EGEHKIMDFIRSERSRSDYDANTRHCLYGLDADLIMLGICSHEPHFALLREEVKFGRQRN 235
Query: 306 KGG 308
G
Sbjct: 236 HNG 238
Score = 199 bits (505), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/129 (69%), Positives = 111/129 (86%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV++ QIPEFDNLYLDMNGIIH+CSHP+D D FRI+E++I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVQDEQIPEFDNLYLDMNGIIHSCSHPDDEDVSFRISEEEI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F+DIF+YI LF +I+P+K+FFMA+DGVAPRAKMNQQR RRF SAK A+ KA++ G
Sbjct: 61 FRDIFNYINFLFGIIKPRKVFFMAVDGVAPRAKMNQQRARRFMSAKNAQEAMNKARKNGV 120
Query: 121 RLPTEKRFD 129
++P EK FD
Sbjct: 121 KIPDEKPFD 129
>gi|406701694|gb|EKD04809.1| strand exchange protein (5'-3' exoribonuclease) [Trichosporon
asahii var. asahii CBS 8904]
Length = 1632
Score = 236 bits (602), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 190/338 (56%), Gaps = 56/338 (16%)
Query: 132 TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK-----------EAEVLEQKAKEKG 180
+ P+K+ FMAIDGVAPRAKMNQQR RRFR+++ + + E +
Sbjct: 34 VVNMARPRKVLFMAIDGVAPRAKMNQQRSRRFRASQEAAEKEEERKQQIAMFEAMGQTVS 93
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
+ +K +DSN ITPGTPFM L L+Y+V K++TD WKD VI+S
Sbjct: 94 DETKNKKSWDSNAITPGTPFMDLLSASLKYWVSHKLSTDPGWKD-----------VIISD 142
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV-- 298
PGEGEHKI+D+IR ++ P+++PN H +YGLDADLIML L THEP F +LRE+V
Sbjct: 143 ASVPGEGEHKIVDWIRRERTYPEWDPNTSHAIYGLDADLIMLALATHEPNFRVLREDVFA 202
Query: 299 --------------KFNTKSNKGGSQIV---------TPEETK-FFLLHLSLMRDYLELE 334
+ + K+N G + + PE+ K F L ++ +RDYL +E
Sbjct: 203 QSSRGPRVCDNCGKEGHIKANCKGEKKMPDPNVVAKAKPEDPKPFIWLDVACLRDYLAVE 262
Query: 335 FGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLP 394
L P SFPF E IDDW+ M F +GNDF+P+LP L I GA+ L ++++ L
Sbjct: 263 ---LNVP--TSFPFDQELAIDDWIFMIFFVGNDFLPHLPSLEIREGAIDTLLEIWKRELD 317
Query: 395 TLDGYINEGGYLNLKRFEKFLTKLASFD---FEQFREK 429
+ GY+ G +NL R + L +A+ + F+Q +E+
Sbjct: 318 RMGGYLTNHGKVNLGRAQIILDGIAAREDNIFQQRKEQ 355
Score = 164 bits (414), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 107/182 (58%), Gaps = 7/182 (3%)
Query: 489 YSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGC 548
Y D W + + + K + +L K +E+ R Y+ + W L YYY G
Sbjct: 574 YEDTVRLWEPGYRERYYRQK---FGVELSDKKFMSEITR----SYMEGLCWVLEYYYQGV 626
Query: 549 VSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLM 608
+W WYYP+HYAP+ D D L++K+ G PF PF QLL V PAAS+ LPEP Q LM
Sbjct: 627 PAWDWYYPYHYAPFAQDFHDVGSLDIKFRKGNPFTPFGQLLGVFPAASRIHLPEPLQTLM 686
Query: 609 TLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
E+SPI+++YP +F D+NGKK W+ V L+PFID+ +L+ A+ + E L+ +E+ RN
Sbjct: 687 IEEDSPIIDFYPSDFEIDMNGKKMAWQGVALLPFIDQHRLLAALKSKEPELSQDEKRRNT 746
Query: 669 HG 670
G
Sbjct: 747 WG 748
Score = 87.0 bits (214), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MNGI+H C+HP D TE+ + ++F Y E + M +P+K+ FMAIDGVAPRAKMN
Sbjct: 1 MNGIVHPCTHPEGRDAP--PTEQDMMVEVFKYTERVVNMARPRKVLFMAIDGVAPRAKMN 58
Query: 96 QQRGRRFRSAK 106
QQR RRFR+++
Sbjct: 59 QQRSRRFRASQ 69
>gi|449330168|gb|AGE96430.1| ribonucleic trafficking protein 1 [Encephalitozoon cuniculi]
Length = 655
Score = 236 bits (602), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 211/729 (28%), Positives = 323/729 (44%), Gaps = 142/729 (19%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FR++ + + E P D LYLD N IIH C P E+ +
Sbjct: 1 MGVPSLFRWLQLSHKETIHSIMEK--PSVDALYLDFNAIIHTCIKPGLGSEE--EIERDL 56
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSA---KEAEVLEQKAK- 116
++ + +I+ + +P+KL ++A+DGVAPRAK++ QR RR++SA KE + AK
Sbjct: 57 YKTVGDFIDHILLKTRPRKLLYIAVDGVAPRAKLSHQRARRYKSALGKKEGSAVIAAAKT 116
Query: 117 EKGERLPTEKRFDFITLKFCFPKKLF--FMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQ 174
+ P+EK+ + +F L+ F+A D E+ L
Sbjct: 117 DPTMSSPSEKKDEIPNEEFTGESSLYDKFIAED------------------PSESSSLAI 158
Query: 175 KAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDV 234
+ TEK FD NCITPGTPFM RLH+ L +++ K+++D ++
Sbjct: 159 DVE-------TEK-FDLNCITPGTPFMERLHKVLISYIQCKLSSDP---------EVSNL 201
Query: 235 CVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH------- 287
+I S + PGEGE KIM +IR S+ N H +Y D DLI LGL
Sbjct: 202 RIIYSSYLVPGEGEQKIMSFIR---SQGSIARNDVHMIYSPDGDLIFLGLSLQRNRVLIM 258
Query: 288 EPYFSLLREEVKFN-TKSNKGG---SQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGV 343
YFS +E K TK + G + F +++S +R L EF +
Sbjct: 259 RDYFSPSKERRKRTCTKCGRTGHSDEECGVFTNYHFVYVNISELRTRLIREFRRHTAQR- 317
Query: 344 LSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEG 403
FS E I+DDW+ + FL+GNDF+P +P L I ++ + ++ + + YI
Sbjct: 318 ----FSEERILDDWIFLCFLLGNDFVPPIPCLDIRFHSIETITEIMMKSFSEMKSYITCN 373
Query: 404 GYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAAL 463
+N + F LAS + D + KS+ +D L
Sbjct: 374 KMINYQALRNFYAILASKE-----------------------DALYHRKSQSLDKFREGL 410
Query: 464 IKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTN 523
G ++ YE + ++ G K YY KL+ T
Sbjct: 411 ---------KGMPRIV----YE-----------KIPIHTKTG--KVQYYTSKLN--ATTE 442
Query: 524 EVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFL 583
+++ Y++ + W YY G W WYYP+H+AP +D+ S +++ G P
Sbjct: 443 SDIKNICYEYVKGLYWVYSYYVLGWTGWDWYYPYHFAPLAADLSKLSINDIQISPGHPLR 502
Query: 584 PFQQLLAVLPAASKELLPEPYQNLMTLENSPIL----EYYPEEFATDLNGKKQDWEAVVL 639
P +QLL VLP S+ ++PE Q PI +YYPE+ TD+ K W+ +VL
Sbjct: 503 PLEQLLVVLPPMSRGMVPEGLQ--------PIFDDYKDYYPEDVKTDMFDKVYLWQEIVL 554
Query: 640 IPFIDEVKLIKAMDAVE-HLLTDEERSRNRHGPMLVYTY----SNVNLG---------TA 685
+PF+D + I + +AV+ + L E+ SRN L++T S V LG +
Sbjct: 555 LPFMD-FRPILSENAVKFNTLGYEDLSRNLRSLDLLFTTDKKSSEVILGMYSKLKPMCSI 613
Query: 686 LAPDYFPAI 694
+P YF I
Sbjct: 614 RSPGYFGTI 622
>gi|443927373|gb|ELU45871.1| 5'-3' exoribonculease Dhp1 [Rhizoctonia solani AG-1 IA]
Length = 1086
Score = 235 bits (599), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/333 (42%), Positives = 186/333 (55%), Gaps = 56/333 (16%)
Query: 132 TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA--------------EVLEQKAK 177
+ P+KL FMAI VAPRAKMNQQR RRFR+A+EA E L
Sbjct: 88 VVSMARPRKLLFMAI--VAPRAKMNQQRSRRFRAAQEAKEKEEERKEAIKMFEALGHSVS 145
Query: 178 EKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVI 237
E+ T+K +DSN ITPGTPFM L Q LRY+V K +D WK++ VI
Sbjct: 146 EET----TKKAWDSNAITPGTPFMDLLAQSLRYWVVQKQNSDP---------GWKNLQVI 192
Query: 238 LSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE 297
+S PGEGEHKIMD+IR + P ++PN RH +YGLDADLIML L THEP+F +LRE+
Sbjct: 193 ISDASVPGEGEHKIMDFIRRQRVNPGHDPNTRHVIYGLDADLIMLALATHEPHFRVLRED 252
Query: 298 VKFNTKSNKGGSQIVT---------------------PEETKFFLLHLSLMRDYLELEFG 336
V + SNK +I PE+ F L ++++R+YL +E
Sbjct: 253 VFAD--SNKNSCRICGQEGHFAAQCTGKPKEKDTSKPPEKKPFIFLDVAVLREYLAIE-- 308
Query: 337 KLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTL 396
L P + F F +E IDDWV + F +GNDF+P+LP L I GA+ L K++++ LP +
Sbjct: 309 -LNVPNI-PFAFDLERAIDDWVFLIFFVGNDFLPHLPSLEIREGAIDTLLKIWKDELPRM 366
Query: 397 DGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
GY+ E G N + L LA + E FR++
Sbjct: 367 GGYLAEHGQANKANVQIMLEGLAKREDEIFRKR 399
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 131/219 (59%), Gaps = 13/219 (5%)
Query: 507 HKTDYYHYKLDYAKVTNEVLRDQ-AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISD 565
+K YY K A++ + LR Q Y+ + W L YYY G SW+W+YP+H+AP+ +D
Sbjct: 657 YKERYYRSKFG-AELNDTELRKQITTSYMEGLCWVLQYYYQGAPSWTWFYPYHFAPFAAD 715
Query: 566 IKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFAT 625
+D H+++K+ +G+PF P++QL+ V PAAS+ +P P+Q+LMT E+SPI+++YP EF
Sbjct: 716 FEDVEHMDIKFNLGQPFKPYEQLMGVFPAASRVHIPTPFQSLMTDEDSPIIDFYPTEFEI 775
Query: 626 DLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTA 685
D+NGKK W+ V L+PFIDE +L+ AM L+D+E RN+ G +Y +L
Sbjct: 776 DMNGKKMSWQGVALLPFIDEKRLLGAMAERYPELSDDEVRRNKWGSNHIYVSDGNDLY-- 833
Query: 686 LAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDV 724
D+F + EKP+ D +L +G+ V
Sbjct: 834 ---DFFCGLYTKQRSEKPIPLD------TRLSRGISGTV 863
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 68/126 (53%), Gaps = 38/126 (30%)
Query: 2 GVPKFFRYISERYP-CLSEVVRE------------YQIP-----------EFDNLYLDMN 37
GVP FR++S++YP +S+VV E ++P E D LYLDMN
Sbjct: 7 GVPALFRWLSKKYPKIVSQVVEEEPTRVPDADGNLVELPMDTSTPNPNGFELDCLYLDMN 66
Query: 38 GIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQ 97
GI P TE+ + ++F+Y + + M +P+KL FMAI VAPRAKMNQQ
Sbjct: 67 GI----PAPE--------TEEDMMVEVFNYTDRVVSMARPRKLLFMAI--VAPRAKMNQQ 112
Query: 98 RGRRFR 103
R RRFR
Sbjct: 113 RSRRFR 118
>gi|303285348|ref|XP_003061964.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456375|gb|EEH53676.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 252
Score = 235 bits (599), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 165/301 (54%), Gaps = 70/301 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R++SERYP L+ +P DNLYLDMNG+IHNCSH D + R+TE ++
Sbjct: 1 MGVPKFYRWLSERYPLLNHTCGAGTVPIIDNLYLDMNGVIHNCSHGAGTDINTRMTEDEM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+F Y++ +FRM++P++L +MAIDGVAPRAKMNQQR RRFRSA EA+ +++A KGE
Sbjct: 61 MAKVFAYLDHIFRMVRPRRLLYMAIDGVAPRAKMNQQRSRRFRSALEAKKAKEEAIAKGE 120
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
P+ + FD C FMA
Sbjct: 121 PEPSGEPFD----SNCITPGTPFMA----------------------------------- 141
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
RL RF +V K T D W+ VILSG
Sbjct: 142 -RLSEHLRF---------------------YVMKKQTEDPQWQKA---------TVILSG 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HE GEGEHKIM++IR+ + +P ++PN HCLYGLDADLIML L THEP+F LLRE VKF
Sbjct: 171 HEVRGEGEHKIMEHIRWARGEPGWDPNQTHCLYGLDADLIMLALVTHEPHFCLLREVVKF 230
Query: 301 N 301
Sbjct: 231 G 231
>gi|384483989|gb|EIE76169.1| hypothetical protein RO3G_00873 [Rhizopus delemar RA 99-880]
Length = 1163
Score = 234 bits (598), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/343 (39%), Positives = 194/343 (56%), Gaps = 41/343 (11%)
Query: 117 EKGERLPTEKRFDFITLKFCF------PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAE 170
++ RL E+ I K C+ PKK+FF+ +DGV PR KMNQ+R ++F+SAKE+
Sbjct: 47 DRYHRLNEEQILPRIFNKICYIYGQIKPKKIFFLTVDGVTPRIKMNQERSKQFQSAKESL 106
Query: 171 VLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWV 230
+ +R P ++ + PGT FM +L QLRY V KI+ D
Sbjct: 107 I---------KREPL-----ADVVLPGTAFMAKLTAQLRYLVAKKISEDI---------E 143
Query: 231 WKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPY 290
W+DV VI+SG + PGE +HKI +YIR KS+ DY+PN +HC+YG+ DL+++ L THEP
Sbjct: 144 WRDVEVIVSGPDVPGESKHKIAEYIRLCKSQADYDPNTKHCMYGIRDDLLLVSLATHEPN 203
Query: 291 FSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSI 350
F+L+ E+ + SQ +FLLHLSL+R+ LE EF LK L F +
Sbjct: 204 FALVCEQDDAQNADERKKSQ--------YFLLHLSLIRECLEREFSSLK--SSLPFKYDF 253
Query: 351 ENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKR 410
E I+DD+VL+ + ND +P L L + G L +L K+Y+EVLPT D YI GG + L R
Sbjct: 254 ERILDDFVLLSLITSNDLLPRLSGLQVNRGGLNILMKIYKEVLPTCDDYIQNGGQITLTR 313
Query: 411 FEKFLTKLASF-DFEQFREKYAD-IQYLEGKMGKKFSDVFHKE 451
EK + ++ + + F E+Y + I L K F D H++
Sbjct: 314 LEKIFARASTIVESKLFEEQYVEPICKLSPPYTKPFDDPQHQQ 356
Score = 159 bits (403), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 182/364 (50%), Gaps = 23/364 (6%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY LD +++L YI +IQ +YY G +SW W+YP+HYAP +SD+K
Sbjct: 501 KAAYYKEMLDIDFFASDLLEHAVASYILSIQLINSFYYQGILSWRWFYPYHYAPKLSDLK 560
Query: 568 DFSHL-NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
D + +PF + L+AVLP K L+P PYQ LMT SPI +YP F TD
Sbjct: 561 DLGRFQGFNFPADQPFTLHEYLMAVLPPCHKRLVPVPYQGLMTDYKSPISLFYPTRFYTD 620
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTAL 686
N D E + IPF+DE +L++A+ + + LL + E NR G + + Y
Sbjct: 621 FNKNDLDEECIPKIPFVDEKQLLEAIQSKQGLLREHELRSNRFGEIYHFAYDKDQNRIYK 680
Query: 687 APDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKL--------YVTHFPTLKH 738
P Y + + V L R+ +Y HP + QD + L FP+L H
Sbjct: 681 NPSYNSRLPD---VRPCLARETVY-HP----PAVIQDKPILLPGAKLGKDSPVGFPSLDH 732
Query: 739 VQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIR 797
+ + V VF++ S +++II ++++ SL+++A+ ++ + + + YP+L E
Sbjct: 733 ISHDSLLTKHDVCVFKKESSKDTMIISIKNRYTDTSLQELANLLIARQVHVGYPYLKEAI 792
Query: 798 VQAVATKDSRI---SFDKNSGPVFER--AAKDMQDAFQLSKKSITDGYYTKLGVDIGNTE 852
+ V+ + + S ++ F + ++ ++A+ K +I Y +LG+ IG+TE
Sbjct: 793 IVGVSNSEYKYFIKSKEEGESHNFSKHQWTEEEREAWYKKKCAIQHKYNKRLGLLIGDTE 852
Query: 853 VLVY 856
+++
Sbjct: 853 FMIH 856
Score = 99.8 bits (247), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 71/110 (64%), Gaps = 5/110 (4%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
M +PK ++ ERYP S+V+ E IPEFD + I++N N D + R+ E+QI
Sbjct: 3 MIIPKLVEFVCERYPLSSQVITEQYIPEFD-----ITDIVYNSCQTNSFDRYHRLNEEQI 57
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEV 110
IF+ I ++ I+PKK+FF+ +DGV PR KMNQ+R ++F+SAKE+ +
Sbjct: 58 LPRIFNKICYIYGQIKPKKIFFLTVDGVTPRIKMNQERSKQFQSAKESLI 107
Score = 72.4 bits (176), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 16/123 (13%)
Query: 968 YLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRD 1027
YLP+ VA+ IS L LS+ T S+ +++S + N+GLN+KF + E V+G+TR++
Sbjct: 1033 YLPAREVANDCKISALTLSKITSSLLVMES---NGNKLNVGLNLKFEHRKERVIGYTRKN 1089
Query: 1028 ETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWL 1087
W Y+++ + LI ++ FPE L +++ PH E W
Sbjct: 1090 SIAGYWEYSDRAIGLIHEFIAAFPEFVDLLNTR-------KENTIPHTEE------FMWT 1136
Query: 1088 KEQ 1090
EQ
Sbjct: 1137 TEQ 1139
>gi|296813543|ref|XP_002847109.1| 5'-3' exoribonuclease 2 [Arthroderma otae CBS 113480]
gi|238842365|gb|EEQ32027.1| 5'-3' exoribonuclease 2 [Arthroderma otae CBS 113480]
Length = 1027
Score = 234 bits (598), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 228/471 (48%), Gaps = 109/471 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FR++S +YP + V E Q E +D I + + PN N +
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQE-----IDGQEIPVDTTKPNPNGEEM----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P +G P A +GE
Sbjct: 52 YLDMNG---IVHPCTHP--------EGKPPPAN------------------------EGE 76
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+ ++ + P+K+ +A+DGVAPRAKMNQQR RRFRSA++A+ ++K E
Sbjct: 77 MMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRFRSAQDAKAEDEKKVEFA 136
Query: 181 ERLPTEKR---------------FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
L +KR +D+N ITPGTPFM L LRY+V K++TD
Sbjct: 137 RLLKKQKRGKTDVTIAEEVITKTWDTNVITPGTPFMDILALALRYWVAYKLSTDP----- 191
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGL---------- 275
W+ + VI+S PGEGEHKIM++IR ++ P+Y+PN RH +YGL
Sbjct: 192 ----GWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYGLVSDTNIYTSR 247
Query: 276 --DADLIMLGLCTHEPYFSLLREEVKFN---TKSNKGGSQIVTPEET------------- 317
DADLIMLGL THEP+F +LRE+V F ++ K Q EE
Sbjct: 248 LDDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKQGEFD 307
Query: 318 ---------KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDF 368
F LH+S++R+YL +E ++P FPF +E +DDWV M F +GNDF
Sbjct: 308 EKQKGSPLKPFIWLHVSILREYLAVEMQVPQQP----FPFDLERALDDWVFMCFFVGNDF 363
Query: 369 IPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
+P+LP L I + L ++++ +P + GY+ + G ++L + + L LA
Sbjct: 364 LPHLPSLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLA 414
Score = 169 bits (429), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 102/141 (72%)
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
A Y+ + W L YY+ GC SW+WYYP+HYAP+ +D D +++++ G PF PF+QL+
Sbjct: 608 ARAYVEGLSWVLLYYFQGCPSWTWYYPYHYAPFAADFVDIGAMDVQFTKGIPFKPFEQLM 667
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
VLPAAS +PE +++LM+ ENS I+++YPE+F DLNGKK W+ V L+PFIDE +L+
Sbjct: 668 GVLPAASNHAIPEVFRDLMSDENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLL 727
Query: 650 KAMDAVEHLLTDEERSRNRHG 670
KAMD LL++EE++RN G
Sbjct: 728 KAMDKRYPLLSEEEQARNAMG 748
>gi|255538898|ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223551215|gb|EEF52701.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 1113
Score = 234 bits (598), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/342 (41%), Positives = 194/342 (56%), Gaps = 55/342 (16%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEV-------LEQKAKE 178
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFR+AK+ E L Q+ +
Sbjct: 82 FDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKDREEAAAEEERLRQEFER 141
Query: 179 KGERLP---TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
+G +LP + + FDSN ITPGT FM L L+Y++ L++ D WK V
Sbjct: 142 EGRKLPPKESSQVFDSNIITPGTEFMAVLSIALQYYIHLRLNNDP---------GWKKVK 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHK+M YIR ++ P Y+PN RHCLYGLDADLIML L THE +FS+LR
Sbjct: 193 VILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEIHFSILR 252
Query: 296 E------------------------EVKFNTKSN----KGGSQIVTPEETKFFLLHLSLM 327
E E K K+ KG V + +F L++ +
Sbjct: 253 EIVFTPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDEKGDEGAVAKKPYQF--LNIWTL 310
Query: 328 RDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYK 387
R+YLELE ++ P F E I+DD++ M F +GNDF+P++P L I GA+ LL
Sbjct: 311 REYLELEM-RIPNP---PFKIDFECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLLA 366
Query: 388 VYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
VY++ + GY+ +G NL + E F+ + S++ + F+++
Sbjct: 367 VYKKEFTAMGGYLTDGCKPNLSKVEHFIQAVGSYEDKIFQKR 408
Score = 170 bits (431), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 120/210 (57%), Gaps = 9/210 (4%)
Query: 477 EVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRA 536
+ N N EE D W+ ++ E KT + ++ RD Y
Sbjct: 538 DAFNSKNPEEDKIRLGDPGWKERYYEEKFSGKT---------PEELEDIRRDVVLRYTEG 588
Query: 537 IQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAAS 596
+ W +HYYY G SW W+YP+HYAP+ SD+K L++K+E+G PF PF QLL V PAAS
Sbjct: 589 LCWVMHYYYEGVCSWQWFYPYHYAPFASDLKHLGQLDIKFELGSPFKPFNQLLGVFPAAS 648
Query: 597 KELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVE 656
LP Y+ LM+ NSPI+++YP +F D+NGK+ W+ + +PFIDEV+L+ + +E
Sbjct: 649 SHALPVHYRKLMSDPNSPIIDFYPTDFEVDMNGKRYAWQGIAKLPFIDEVRLLAEVKKIE 708
Query: 657 HLLTDEERSRNRHGPMLVYTYSNVNLGTAL 686
H LT+EE RN +++ S+ +L ++
Sbjct: 709 HTLTEEEARRNSAMFDMLFVLSSHSLAESI 738
Score = 119 bits (299), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 100/176 (56%), Gaps = 29/176 (16%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + V+ +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDAIEEEPVVIDGVKIPVDASRPNPNNIEYDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D E +FQ +F YI+ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPSPTSFEE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FRSAKEAEV-------LEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVA 150
FR+AK+ E L Q+ + +G +LP ++ P FMA+ +A
Sbjct: 119 FRAAKDREEAAAEEERLRQEFEREGRKLPPKESSQVFDSNIITPGTE-FMAVLSIA 173
>gi|118388580|ref|XP_001027386.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila]
gi|89309156|gb|EAS07144.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 1793
Score = 234 bits (598), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 222/433 (51%), Gaps = 71/433 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP F+ +++ RYP + +++ ++P D YLDMNGII+ CS E +
Sbjct: 1 MGVPGFYSWLARRYPLILHQIKKGEVPNIDCFYLDMNGIIYKCSK----------DEGTV 50
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F+D+ +L R IQ ++F M + + + +
Sbjct: 51 FKDL-----LLQRNIQ--EIFSMIFNYIDEMVNLVE------------------------ 79
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
PKK+ ++ +DG PRAK NQQR RRF+SA+ + L + G
Sbjct: 80 -----------------PKKVLYLFLDGPCPRAKQNQQRTRRFQSAQSWKDLNDSLRNCG 122
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
L + +N I+ GT FM L++QL +++ K D W + + V SG
Sbjct: 123 -FLSEGETMKNNSISTGTEFMHDLNKQLHFYICKKFEQDPRWSN---------LEVFFSG 172
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
PGEGEHKI++++ S DY+P HC+YG DADLIMLGL TH Y S+LREE+KF
Sbjct: 173 SNVPGEGEHKIINFMHQYCSSQDYDPTTTHCIYGADADLIMLGLSTHIKYVSILREEMKF 232
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
++ + E F +++L+++R+Y+ELE+ K+ V F+IE +IDD++L+
Sbjct: 233 QPPVSRAAKR--DRESVTFQMIYLNIVREYMELEY-KMLWKKVKKLEFNIERVIDDFLLI 289
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
IGNDF+P L +I G +L ++Y++ L D Y+N+ G++N ++ + ++A
Sbjct: 290 CCFIGNDFLPRLYCFNIREGQFEILIQIYKDYLVEADSYLNDNGHINWVGLQQIIQRIAE 349
Query: 421 FDFEQFREKYADI 433
+ + +K DI
Sbjct: 350 VELDFIGDKATDI 362
Score = 134 bits (337), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 190/778 (24%), Positives = 333/778 (42%), Gaps = 137/778 (17%)
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF-----SHLN--LKYEMGEPFLPF 585
Y+ +Q+ L YYY GC SWSWY+P +YAP SDI F HL+ + +++ EP+ P
Sbjct: 529 YLEGLQFVLLYYYQGCPSWSWYFPFYYAPMTSDISLFLNYKAEHLSQEIVFDLSEPYPPM 588
Query: 586 QQLLAVLPAASKELLPEPYQNLMTLENSPI---LEYYPEEFATDLNGKKQDWEAVVLIPF 642
+QL+ ++ + LLP+P+ L+T NS + ++YYP++F D G E +V++PF
Sbjct: 589 KQLMCIIHPENANLLPKPFAQLLTDPNSKLRSPVDYYPDKFTIDPYGGVFSHEYIVVLPF 648
Query: 643 IDEVKLIKAMDAVEHL--LTDEERSRNRHGPMLVYTYSN----VNLGTALAPDYFPAINE 696
+D+ + +++ + LT +ER RN+ G + Y + + + + + L P+Y+
Sbjct: 649 MDQKLIDDVYSSIDQVKTLTPQERERNQFGKNIKYKFDHNFAPITIQSTL-PNYYKDFQV 707
Query: 697 NHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKV-KVFQQ 755
VE +Y P + ++ FPTL H + E KV K Q
Sbjct: 708 TLKVE-TFDIGKVYSPPTNPQGEA---------LSRFPTL-HAKQVIGCEIDKVEKGLQM 756
Query: 756 PSRNESIIIVQDKVQVPSLKQVADQILGK---TIFINYPHLIEIRVQAVATKDSRISFDK 812
R +S + D + +++ GK + YP+ +++V T+ + + K
Sbjct: 757 KIRVKSDLTEAD---------IVNKVRGKPKYDAYCKYPNCEKVQVTGFLTESTFKNIWK 807
Query: 813 NSG-PVFERA--AKDMQDAFQLS-KKSITDGYYTKLGVDIGNTEVLVYGQPVES--RKYF 866
N + E ++D +F L K ++ +Y K G+ + + PV + KY
Sbjct: 808 NKNLSILENLDYSEDSHHSFYLKIKDELSQTFYKKGGI------IYNHSNPVIAILLKY- 860
Query: 867 FGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLE-------YKTIDEIFYPGCQCFA 919
G+ T + T I ++ Y L+L + +E I++ F GC+
Sbjct: 861 --TEGRRTLKGTIIENSDKYEEMFCPLDLLMKEQKIEKVIQVTKCDNIEKEFPIGCKVVI 918
Query: 920 LSNPHY-GSGGCVISTVK---EENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVA 975
+ G G V K + ++L K D + +DD + L +
Sbjct: 919 AQKGNLDGHTGIVTGYTKGKLAQELLVQLKTKPVYLTDNQLKFYSKDDEAFITLKFLSFK 978
Query: 976 SKLSISPLLLSRFTGSIFI---IDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKK 1032
+LS LL + SI I + S + K ++GLNI NE V R +E ++
Sbjct: 979 LQLSQDVLLDILDSFSIKIEPNLPSANKLPKMLDVGLNIIRRHLNEVVPELARINEASQN 1038
Query: 1033 WFYTEQ------------VVTLIKNYMKQFPEVFGF------LKDHSSDDIYLRDDVFPH 1074
E+ +V LI Y +P++F F L+ + + ++
Sbjct: 1039 ISGREKYQQFRELELSPSLVKLIIEYYNAYPKIFAFVAKLSQLRKKDKNANFYSGQIWSK 1098
Query: 1075 QGEQ---RVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITL-- 1129
+G+ + ++ WL + K E + C + V S + H+ +K+E+ +
Sbjct: 1099 EGQDPNIELVKLYIWLMK----KKESQFCSST-----VASKVMHS----QKIEQLVKFQD 1145
Query: 1130 -FVKPNKLYIPKP--TLDKLCPD---------------PDTKF--KLFDRVVNIRDCYT- 1168
FV+ KL IP+ T+ ++ + D F ++ D+V+ I T
Sbjct: 1146 EFVQ-TKLNIPQKDQTIHQIDANNAIPAVYSSKQYIYFKDQPFYHEVGDQVIYIGTYNTK 1204
Query: 1169 -VPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINL 1223
P G +GTI+GI+ D ++VVF KPF GV + RC RG + + NL
Sbjct: 1205 NAPFGLQGTIVGIM------DDKFEVVFIKPFIGGVNLGGRCPPQRGLVVQFDEIYNL 1256
>gi|322801233|gb|EFZ21920.1| hypothetical protein SINV_00544 [Solenopsis invicta]
Length = 809
Score = 234 bits (596), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 159/425 (37%), Positives = 215/425 (50%), Gaps = 90/425 (21%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MGVP FFR++S +YP + E + + I D I N + PN N F
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKPISA------DGTCIPVNSADPNPNGVEF----DN 50
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
++ D+ I+ P+ D AP+ E E++E E
Sbjct: 51 LYLDMNG---IIHPCTHPE-------DKPAPK--------------DEDEMMEA-IFECI 85
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-------EVL 172
+RL + P+KL +MAIDGVAPRAKMNQQR RRFR++KE E +
Sbjct: 86 DRL----------FRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETMEKIDEIERI 135
Query: 173 EQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+ KG LP EK FDSNCITPGTPFM RL L Y++ ++ D
Sbjct: 136 RSELTLKGASLPPEKPKEAHFDSNCITPGTPFMARLSACLHYYIHERLNNDP-------- 187
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
W+++ VILS PGEGEHKIMD+IR +++PD++PN +H L G DADLIMLGL THE
Sbjct: 188 -GWRNIQVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIMLGLATHE 246
Query: 289 PYFSLLREEVKFN--------------TKSNKGGSQIVTPEETK------FFLLHLSLMR 328
P F+++REE K N + G PEE F + L+++R
Sbjct: 247 PNFTIIREEFKPNKPKPCDICGQLGHEMRDCTGAEPNQRPEENTFGSECLFIFVRLNVLR 306
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
+YLE E L P L F + E +DDWV M F +GNDF+P+LP L I GA+ L +
Sbjct: 307 EYLERE---LYMPN-LPFKYDFERAVDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVAL 362
Query: 389 YQEVL 393
Y++ +
Sbjct: 363 YKKAV 367
Score = 157 bits (396), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 106/187 (56%), Gaps = 8/187 (4%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
DE W F K YY K D + + A Y+R + W L YYY GC S
Sbjct: 497 DEVRLWEDGF-------KDRYYESKFDVSPDNFAFRNNVALQYVRGLCWVLRYYYQGCAS 549
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGE-PFLPFQQLLAVLPAASKELLPEPYQNLMT 609
W WY+P+HYAP+ SD + L+ ++E PF P +QL+ V PAAS++ +PEP+ LMT
Sbjct: 550 WRWYFPYHYAPFASDFINIGGLSTEFEKNTVPFRPLEQLMGVFPAASRKHVPEPWAKLMT 609
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
S I+++YPE+F DLNGKK W+ V L+PF+DE +L KA+ LT+ E+ RN
Sbjct: 610 DPKSQIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALAPYYDSLTEAEKKRNVR 669
Query: 670 GPMLVYT 676
G +Y
Sbjct: 670 GDDRLYV 676
>gi|412993025|emb|CCO16558.1| predicted protein [Bathycoccus prasinos]
Length = 1062
Score = 233 bits (595), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 167/456 (36%), Positives = 241/456 (52%), Gaps = 86/456 (18%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNG--IIHNCSHPNDNDPHFRITEK 58
MGVP F+R++S +YP + V E ++ +D+NG + + S N N F
Sbjct: 1 MGVPAFYRWLSVKYPKIIADVVEDEV-------VDINGNKVFVDSSKSNPNGQEF----D 49
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
++ D+ I F P+ R E EV E
Sbjct: 50 NLYLDMNGIIHPCF---HPED---------------------RPPPTTEEEVF-LNIFEY 84
Query: 119 GERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA-- 176
ERL F+ ++ P+K+ +MAIDGVAPRAKMNQQR RRFR+A+EAE + +
Sbjct: 85 IERL-------FLMIR---PRKVLYMAIDGVAPRAKMNQQRSRRFRAAQEAEEKKIEEEK 134
Query: 177 -----KEKGERLPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+ G +P + FDSN ITPGTPFM RL + L+++V+ K TDK
Sbjct: 135 LREKLRRDGIEVPPKIESGVFDSNVITPGTPFMGRLAEALKFYVRKKQNTDK-------- 186
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPD---YNPNMRHCLYGLDADLIMLGLC 285
WK++ VI+S PGEGEHK M YIR ++ + Y+PN RH +YGLDADLIML L
Sbjct: 187 -GWKNIKVIVSDASVPGEGEHKAMHYIRQQRACANGGGYDPNTRHVVYGLDADLIMLALA 245
Query: 286 THEPYFSLLREEV---KFNTKSNKGGSQIVTPEETK-------FFLLHLSLMRDYLELEF 335
THEP+F +LRE V K N + GG+ + + F LL ++++R+YL L+
Sbjct: 246 THEPHFHILREVVFQQKPNESAQNGGAGAIDKNAKQIAIARKPFQLLSVTILREYLALDL 305
Query: 336 GKLKEPGVLSFPFSI--ENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVL 393
P VL F+I E + DD+V M F +GNDF+P+ P L I GA+ LL +Y++ L
Sbjct: 306 ----SPHVLPQTFTIDRERLFDDFVFMCFFVGNDFLPHSPTLEIREGAIDLLMTIYKQEL 361
Query: 394 PTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
L G++ E G NL+R +F+ +A F+ + F+++
Sbjct: 362 GNLGGHLVEDGTPNLRRVGQFVRAVAQFEEQIFQKR 397
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 119/198 (60%), Gaps = 4/198 (2%)
Query: 492 EDEEWRTNF-FSEFGQHKTDYYHYKLDYAKVTN--EVLRDQAECYIRAIQWNLHYYYNGC 548
EDE N E G K YY K+ + + +V+R E +IR + W YYY GC
Sbjct: 646 EDEMEADNIRLGEIG-WKERYYDAKMGSHDLNSRRKVVRGMVEEFIRGLLWVCKYYYEGC 704
Query: 549 VSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLM 608
SW W+YP+HYAP+ +D+ D ++ ++E+G+PF PF QL+ VLPAAS LP + LM
Sbjct: 705 CSWGWFYPYHYAPFATDMVDLELISTEFELGKPFKPFDQLMGVLPAASAHALPPAFYPLM 764
Query: 609 TLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
T E+SPI+++YP+ F D+NGK+ W+AV L+P+ID +L+ ++ LT EE +RN
Sbjct: 765 TDEDSPIIDFYPKHFDLDMNGKRFAWQAVALLPWIDADRLLTETRNLDCTLTPEEANRNT 824
Query: 669 HGPMLVYTYSNVNLGTAL 686
L+Y + +++ +
Sbjct: 825 INIELLYAHEQLSISKCM 842
>gi|336386148|gb|EGO27294.1| hypothetical protein SERLADRAFT_381861 [Serpula lacrymans var.
lacrymans S7.9]
Length = 318
Score = 233 bits (594), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 148/378 (39%), Positives = 197/378 (52%), Gaps = 105/378 (27%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE-------------YQIP-----------EFDNLYLDM 36
MGVP FR++S++YP + + V E ++P EFDNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVQSVAEEEETEMPDAEGINIKVPVNMATPNPNGTEFDNLYLDM 60
Query: 37 NGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQ 96
NGI+H C+HP DN P TE+++ DIF Y E + M++P+K+ FMAIDGVAPRAKMNQ
Sbjct: 61 NGIVHPCTHP-DNKPAPE-TEEEMMVDIFSYTERVVNMVRPRKVLFMAIDGVAPRAKMNQ 118
Query: 97 QRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMN 156
QR RRFRSA+EA K KE+ R + VA M
Sbjct: 119 QRSRRFRSAQEA-----KDKEEARR-------------------------EAVAEWEAM- 147
Query: 157 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKI 216
G+ ++ +V +DSN ITPGTPFM L LRY+V K+
Sbjct: 148 ---GKTISDDEKNKVA----------------WDSNAITPGTPFMDLLALSLRYWVVQKM 188
Query: 217 TTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLD 276
TD WKD+ VI+S PGEGEHKIMD+IR ++ ++PN RH +YGLD
Sbjct: 189 NTDP---------GWKDLQVIISDASVPGEGEHKIMDFIRRQRTNVGHDPNSRHVIYGLD 239
Query: 277 ADLIMLGLCTHEPYFSLLREEVKFNTKSNKG-----------------GSQIVTP--EET 317
ADLIML L THEP+F +LRE+V F+ G ++I P E+
Sbjct: 240 ADLIMLALATHEPHFKVLREDV-FSQDKGTGCRICGEEGHYAAQCTGVKTEIKKPPTEKK 298
Query: 318 KFFLLHLSLMRDYLELEF 335
F L ++++R+YLE+E
Sbjct: 299 PFIFLDVAILREYLEVEL 316
>gi|359479538|ref|XP_002272207.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1072
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 144/382 (37%), Positives = 206/382 (53%), Gaps = 83/382 (21%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIP-----------EFDNLYLDMNGIIHNCSHPNDN 49
MGVP F+R++ +YP + VVR + EFDNLYLDMNGIIH C HP D
Sbjct: 1 MGVPSFYRWLVNKYPEI--VVRAVEDERESSSANPNGIEFDNLYLDMNGIIHPCFHPEDQ 58
Query: 50 --DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE 107
P T +++F +++ YI+ +F +++P+KL +MAIDGVAPRAKMNQQR RRF++AK+
Sbjct: 59 IFPP---TTFEEVFNNMYEYIDRIFSIVRPRKLLYMAIDGVAPRAKMNQQRRRRFQTAKD 115
Query: 108 AEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 167
E+ E + E+R ++ F M + P+ +
Sbjct: 116 NEIAEAE----------EQRL----------RRQFEMEGKPLVPK--------------Q 141
Query: 168 EAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
E++V D N ITPGT FM + + L+ ++ ++ +
Sbjct: 142 ESQV-----------------SDPNIITPGTVFMHEVSKALQQYICSRMKHEA------- 177
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
WKD+ VILS PGEGEHKIM +IR +S PDYNPN HCLYGLDADLIML L TH
Sbjct: 178 --GWKDLKVILSDSNVPGEGEHKIMSFIRLQRSLPDYNPNTLHCLYGLDADLIMLALATH 235
Query: 288 EPYFSLLREEVKFNTKSNKGGSQIVT----PEETKFFLLHLSLMRDYLELEFGKLKEPGV 343
E +FS+LRE+V + S + T P+ LH+ ++R+YLEL+ K+ +P
Sbjct: 236 EVHFSILREDVLTLEQRGSCESAVETKTSPPKANSSLFLHVWILREYLELDM-KISDPPE 294
Query: 344 LSFPFSIENIIDDWVLMGFLIG 365
+ E I+DD++ + F +G
Sbjct: 295 KLKEINFERIVDDFIFLCFFLG 316
Score = 139 bits (350), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 25/219 (11%)
Query: 453 SKEMDPDLAALIKATDDDYDDGTEEV----LNYANYEEYYYSDEDEEWRTNFFSEFGQHK 508
+KEM L I+A D + G+ + L + ++E YY ++
Sbjct: 563 TKEMKKRLKENIRAKSDLWRSGSLGIDRVRLGHPGWKERYYKEK---------------- 606
Query: 509 TDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKD 568
D ++ ++ + Y + W L YY++G SW+W+YP+HY P+ SD K
Sbjct: 607 -----CSCDTSQGIESTRKELVQKYTEGLLWVLQYYFSGVPSWTWFYPYHYGPFASDFKG 661
Query: 569 FSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLN 628
S + K+E G PF PF QL+ VLP +S LP+ YQ LM E+S I+++Y F D +
Sbjct: 662 LSRVKGKFERGSPFKPFDQLMGVLPPSSAHALPKAYQPLMIDEDSNIIDFYNTNFEVDTD 721
Query: 629 GKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
GK+ W+ + +PFIDE +L+ +E L D+E RN
Sbjct: 722 GKRFIWQGICKLPFIDEARLLAETRKLEKELEDQEAVRN 760
>gi|125528546|gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indica Group]
Length = 1068
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/341 (40%), Positives = 196/341 (57%), Gaps = 54/341 (15%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK------ 179
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFR+AK+A + +
Sbjct: 82 FDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLREEFER 141
Query: 180 -GERLPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
G +LP +++ DSN ITPGT FM L L+Y++ L++ D WK V
Sbjct: 142 EGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIHLRLNYDP---------GWKQVK 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ P +NPN RHCLYGLDADLIML L THE +FS+LR
Sbjct: 193 VILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLALATHEVHFSILR 252
Query: 296 E------------------------EVKFNTKS---NKGGSQIVTPEETKFFLLHLSLMR 328
E E K K+ ++ G IV + +F L++ +R
Sbjct: 253 EVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGEAIVPKKPYQF--LNIWTLR 310
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
+YLE EF +++ P FP E I+DD++ M F +GNDF+P++P L I GA+ LL V
Sbjct: 311 EYLEYEF-RMQNP---PFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 366
Query: 389 YQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
Y++ P++ GY+ + +L + E F+ + S++ + F+++
Sbjct: 367 YKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKR 407
Score = 169 bits (429), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 116/217 (53%), Gaps = 15/217 (6%)
Query: 452 KSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSE-FGQHKTD 510
+ +E DL ++K + D V N N EE + WR ++ E FG
Sbjct: 503 QERENKEDLKTMLKDALREKSD----VFNSENPEEDKIKLGEPGWRERYYEEKFGARTPG 558
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
E+ RD Y + W +HYYY G SW W+YP+HYAP+ SD+
Sbjct: 559 ----------QIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLG 608
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
LN+ +E+G PF PF QL+ V PAAS LP Y+ LMT NSPI+++YP +F D+NGK
Sbjct: 609 QLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMTDANSPIIDFYPTDFEVDMNGK 668
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
+ W+ + +PFIDE +L+ + VEH LT EE RN
Sbjct: 669 RYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRN 705
Score = 114 bits (286), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 21/122 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREY--------QIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + V E ++P EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D T ++FQ +F YI+ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRP--SPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FR 103
FR
Sbjct: 119 FR 120
>gi|115441335|ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group]
gi|56785082|dbj|BAD82721.1| putative 5'-3' exoribonuclease (XRN3) [Oryza sativa Japonica Group]
gi|113534478|dbj|BAF06861.1| Os01g0872700 [Oryza sativa Japonica Group]
gi|215713440|dbj|BAG94577.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1068
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/341 (40%), Positives = 196/341 (57%), Gaps = 54/341 (15%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK------ 179
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFR+AK+A + +
Sbjct: 82 FDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLREEFER 141
Query: 180 -GERLPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
G +LP +++ DSN ITPGT FM L L+Y++ L++ D WK V
Sbjct: 142 EGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIHLRLNYDP---------GWKQVK 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ P +NPN RHCLYGLDADLIML L THE +FS+LR
Sbjct: 193 VILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLALATHEVHFSILR 252
Query: 296 E------------------------EVKFNTKS---NKGGSQIVTPEETKFFLLHLSLMR 328
E E K K+ ++ G IV + +F L++ +R
Sbjct: 253 EVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGEAIVPKKPYQF--LNIWTLR 310
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
+YLE EF +++ P FP E I+DD++ M F +GNDF+P++P L I GA+ LL V
Sbjct: 311 EYLEYEF-RMQNP---PFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 366
Query: 389 YQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
Y++ P++ GY+ + +L + E F+ + S++ + F+++
Sbjct: 367 YKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKR 407
Score = 169 bits (429), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 116/217 (53%), Gaps = 15/217 (6%)
Query: 452 KSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSE-FGQHKTD 510
+ +E DL ++K + D V N N EE + WR ++ E FG
Sbjct: 503 QERENKEDLKTMLKDALREKSD----VFNSENPEEDKIKLGEPGWRERYYEEKFGARTPG 558
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
E+ RD Y + W +HYYY G SW W+YP+HYAP+ SD+
Sbjct: 559 Q----------IEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLG 608
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
LN+ +E+G PF PF QL+ V PAAS LP Y+ LMT NSPI+++YP +F D+NGK
Sbjct: 609 QLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMTDANSPIIDFYPTDFEVDMNGK 668
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
+ W+ + +PFIDE +L+ + VEH LT EE RN
Sbjct: 669 RYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRN 705
Score = 114 bits (286), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 21/122 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREY--------QIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + V E ++P EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D T ++FQ +F YI+ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRP--SPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FR 103
FR
Sbjct: 119 FR 120
>gi|19571126|dbj|BAB86550.1| putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
Length = 1064
Score = 232 bits (592), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/341 (40%), Positives = 196/341 (57%), Gaps = 54/341 (15%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK------ 179
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFR+AK+A + +
Sbjct: 82 FDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLREEFER 141
Query: 180 -GERLPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
G +LP +++ DSN ITPGT FM L L+Y++ L++ D WK V
Sbjct: 142 EGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIHLRLNYDP---------GWKQVK 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ P +NPN RHCLYGLDADLIML L THE +FS+LR
Sbjct: 193 VILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLALATHEVHFSILR 252
Query: 296 E------------------------EVKFNTKS---NKGGSQIVTPEETKFFLLHLSLMR 328
E E K K+ ++ G IV + +F L++ +R
Sbjct: 253 EVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGEAIVPKKPYQF--LNIWTLR 310
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
+YLE EF +++ P FP E I+DD++ M F +GNDF+P++P L I GA+ LL V
Sbjct: 311 EYLEYEF-RMQNP---PFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 366
Query: 389 YQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
Y++ P++ GY+ + +L + E F+ + S++ + F+++
Sbjct: 367 YKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKR 407
Score = 169 bits (429), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 124/238 (52%), Gaps = 19/238 (7%)
Query: 452 KSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSE-FGQHKTD 510
+ +E DL ++K + D V N N EE + WR ++ E FG
Sbjct: 503 QERENKEDLKTMLKDALREKSD----VFNSENPEEDKIKLGEPGWRERYYEEKFGARTPG 558
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
E+ RD Y + W +HYYY G SW W+YP+HYAP+ SD+
Sbjct: 559 Q----------IEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLG 608
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
LN+ +E+G PF PF QL+ V PAAS LP Y+ LMT NSPI+++YP +F D+NGK
Sbjct: 609 QLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMTDANSPIIDFYPTDFEVDMNGK 668
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAP 688
+ W+ + +PFIDE +L+ + VEH LT EE RN +++ VN L+P
Sbjct: 669 RYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNS----IMFNMLFVNGSHPLSP 722
Score = 114 bits (286), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 21/122 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREY--------QIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + V E ++P EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D T ++FQ +F YI+ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPS--PTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FR 103
FR
Sbjct: 119 FR 120
>gi|396082120|gb|AFN83732.1| 5-3 exoribonuclease [Encephalitozoon romaleae SJ-2008]
Length = 656
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 195/701 (27%), Positives = 309/701 (44%), Gaps = 135/701 (19%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQI---PEFDNLYLDMNGIIHNCSHPNDNDPHFRITE 57
MGVP FR++ LS V + I P D LYLD N IIH C P E
Sbjct: 1 MGVPSLFRWLQ-----LSHKVAIHSILENPSVDCLYLDFNAIIHTCIKPGLESEE--EIE 53
Query: 58 KQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 117
+ + + + +I+ + +P+KL ++AIDGVAPRAK++ QR RR++SA K+
Sbjct: 54 RDLHKTVGDFIDYILLKARPRKLLYIAIDGVAPRAKLSHQRARRYKSA--------LGKK 105
Query: 118 KGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRA-KMNQQRGRRFRSAKEAE-----V 171
+G + + + +F AP++ K ++ GR E+ +
Sbjct: 106 EGSSVKSISKTEF-------------------APQSEKERKEEGRDEEFTGESSLYDKFI 146
Query: 172 LEQKAKEKGERLPTE-KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWV 230
+E ++ + E + FD NCITPGTPFM RLH L +++ K++ D
Sbjct: 147 VEDISESSSLAVDVETENFDLNCITPGTPFMERLHNVLISYIQYKLSNDP---------G 197
Query: 231 WKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPY 290
+ +I S + PGEGE KIM +IR S+ N H +Y D DL+ LGL H
Sbjct: 198 VSHLKIIYSSYLVPGEGEQKIMSFIR---SQESVARNDVHMIYSPDGDLMFLGLSLHRSK 254
Query: 291 FSLLREEVKFN-----------TKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLK 339
++R+ N +S + F +++S +R L EF +
Sbjct: 255 VLIMRDYFSPNKARMKKTCAKCKRSGHSDEECGVFTNYHFVYVNISELRIRLIREFRRYT 314
Query: 340 EPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGY 399
F+ E I++DW+ + FL+GNDF+P P L I ++ + ++ + Y
Sbjct: 315 TQR-----FNEERILNDWIFLCFLLGNDFVPPTPCLDIRFHSIETITEIMAKNFSVTKSY 369
Query: 400 INEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPD 459
I +N + + F T LA+ K ++H+ KS+ +
Sbjct: 370 ITCSSTINFQALKNFCTILAA----------------------KEDGLYHR-KSQSL--- 403
Query: 460 LAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYA 519
D + +G ++V N YE + ++ G K YY KL+
Sbjct: 404 ---------DKFREGLKDVPN-ITYE-----------KIPIHTKTG--KIQYYASKLNAN 440
Query: 520 KVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG 579
T +++ YI+ + W YY G W WYYP+H+AP D+ S ++ G
Sbjct: 441 --TESDIKNVCYEYIKGLYWVYSYYILGSTGWDWYYPYHFAPLAVDLSKISISEIRINPG 498
Query: 580 EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPIL----EYYPEEFATDLNGKKQDWE 635
P P +QLLAVLP SK ++P+ Q PI + YPE+ TD+ K W+
Sbjct: 499 LPLRPLEQLLAVLPPMSKGMVPKVLQ--------PIFNDYKDCYPEDVKTDMFDKVYLWQ 550
Query: 636 AVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
VVL+PF+D ++ + + L E+ SRN L++T
Sbjct: 551 EVVLLPFVDFRSILSENASRFNSLGYEDLSRNLRSLDLLFT 591
>gi|167516040|ref|XP_001742361.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778985|gb|EDQ92599.1| predicted protein [Monosiga brevicollis MX1]
Length = 290
Score = 231 bits (588), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 128/307 (41%), Positives = 168/307 (54%), Gaps = 73/307 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP+ F+ + ERYP + E+ +PEFDN YLD NGI+HNC+H N+ D Q+
Sbjct: 1 MGVPRLFKLLVERYPAILRGTEEHPMPEFDNFYLDFNGIVHNCTHGNEGDVR---KSSQV 57
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
QD+ I F IQ
Sbjct: 58 TQDMMMAI---FHEIQ-------------------------------------------- 70
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
FD I P++L ++AIDGVAPRAKM QQR RRF++ +++E +Q
Sbjct: 71 -----TLFDIIR-----PQRLLYIAIDGVAPRAKMQQQRQRRFKATRDSEAAQQITAVVA 120
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
+P E+ FDSNCITPGT FM L + L YF++ K+ D W+ V V+LSG
Sbjct: 121 PPMP-EEHFDSNCITPGTEFMDLLQRHLVYFIQRKLEEDD---------DWRKVEVVLSG 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV-- 298
H+ PGEGEHKIMD+IR +KS+P Y+PN RHCL+GLDADLIML L THEP+F++LRE
Sbjct: 171 HQVPGEGEHKIMDFIRSLKSQPAYDPNTRHCLHGLDADLIMLALATHEPHFAILRENTVR 230
Query: 299 -KFNTKS 304
FN+K+
Sbjct: 231 RSFNSKN 237
>gi|224082986|ref|XP_002306919.1| predicted protein [Populus trichocarpa]
gi|222856368|gb|EEE93915.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 229 bits (585), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 160/469 (34%), Positives = 237/469 (50%), Gaps = 101/469 (21%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MGVP F+R+++E+YP + +V+ E + + ++ I + S PN N+ I
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEE------EPVVIEGVKIPVDTSKPNPNN----IEYDN 50
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
++ D+ I F P+ R EV +
Sbjct: 51 LYLDMNGIIHPCF---HPED---------------------RPSPTSFGEVFQCM----- 81
Query: 120 ERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 177
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFR+AK+A + +
Sbjct: 82 --------FDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKDASDAAAEEE 133
Query: 178 EK-------GERLP---TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
G +LP T + FDSN ITPGT FM L L+Y++ L++ D
Sbjct: 134 RLREEFEREGRKLPPKETSQTFDSNVITPGTEFMAVLSIALQYYIHLRLNYDP------- 186
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
WK + V+LS PGEGEHK+M YIR ++ P Y+PN RHCLYGLDADLIML L TH
Sbjct: 187 --GWKKIKVVLSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLALATH 244
Query: 288 EPYFSLLRE------------------------EVKFNTKS---NKGGSQIVTPEETKFF 320
E +FS+LRE E K K+ ++ G+ + P++ F
Sbjct: 245 EVHFSILREIVFTPGQQDKCFICGQAGHLAAACEGKAKRKAGEFDEKGNDVAVPKKPYQF 304
Query: 321 LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIING 380
L++ +R+YLE EF ++ P F +E +DD++ + F +GNDF+P++P L I G
Sbjct: 305 -LNIWTLREYLEYEF-RIPNP---PFEIDLERTVDDFIFICFFVGNDFLPHMPTLEIREG 359
Query: 381 ALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
A+ LL VY++ L GY+ +G NL R E F+ + +++ + F+++
Sbjct: 360 AINLLMAVYKKEFRVLGGYLTDGSKPNLSRVEHFIQAVGAYEDKIFQKR 408
Score = 169 bits (429), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 111/191 (58%), Gaps = 9/191 (4%)
Query: 477 EVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRA 536
+V N N+EE + W+ ++ E K+ LD + V RD Y
Sbjct: 527 DVFNSKNHEEDKVKLGEPGWKERYYEEKFSAKS------LDEMEA---VRRDVVLRYTEG 577
Query: 537 IQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAAS 596
+ W +HYYY G SW W+YP+HYAP+ SD+ D LN+ +E+G PF PF QLL V PAAS
Sbjct: 578 LCWVMHYYYEGVCSWQWFYPYHYAPFASDLTDLGQLNISFELGSPFKPFNQLLGVFPAAS 637
Query: 597 KELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVE 656
LP Y+ LMT NSPI ++YP +F D+NGK+ W+ + +PFIDE +L+ + +E
Sbjct: 638 SHALPVHYRKLMTDPNSPIFDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIE 697
Query: 657 HLLTDEERSRN 667
H LT+EE RN
Sbjct: 698 HTLTEEEARRN 708
>gi|167521441|ref|XP_001745059.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776673|gb|EDQ90292.1| predicted protein [Monosiga brevicollis MX1]
Length = 235
Score = 229 bits (583), Expect = 1e-56, Method: Composition-based stats.
Identities = 129/300 (43%), Positives = 170/300 (56%), Gaps = 69/300 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIP----EFDNLYLDMNGIIHNCSHPNDNDPHFRIT 56
MGVP+FF ++++RYP + V+RE + EFDNLYLDMNGIIH C HP D P + +
Sbjct: 1 MGVPQFFAWLAQRYPSIVTVLRETRPNPLGLEFDNLYLDMNGIIHPCCHPEDR-PSPK-S 58
Query: 57 EKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 116
E ++ IF YI+ LFR+I+P++L FMA+DGVAPRAKMNQQR RRFR+A+E Q +
Sbjct: 59 EAEMMLAIFTYIDRLFRVIRPRRLVFMAVDGVAPRAKMNQQRARRFRAAQEGREARQDLQ 118
Query: 117 EKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA 176
G+ L FR
Sbjct: 119 ASGDNLSA--------------------------------------FR------------ 128
Query: 177 KEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCV 236
+ + ER+P FDSNCITPGT FM RL L+++V L+++ D W ++ V
Sbjct: 129 QRRKERMP----FDSNCITPGTEFMSRLSAALQHYVVLRLSEDP---------GWANLQV 175
Query: 237 ILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLRE 296
I S PGEGEHKI+D+IR ++ P+Y+PN RH LYG DADLI+LGL THEP +LRE
Sbjct: 176 IFSDASVPGEGEHKILDFIRNARNGPNYDPNQRHVLYGADADLILLGLATHEPAIYVLRE 235
>gi|357126119|ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Brachypodium distachyon]
Length = 1061
Score = 228 bits (581), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 193/341 (56%), Gaps = 54/341 (15%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK------ 179
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFR+AK+A + ++
Sbjct: 82 FDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEEKLREEFER 141
Query: 180 -GERLPTE---KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
G +LP + + DSN ITPGT FM L L+Y++ L++ D WK +
Sbjct: 142 EGRKLPPKLQSQTCDSNVITPGTEFMAVLSVALQYYIHLRLNYDP---------GWKQIK 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHK+M YIR ++ P +NPN RHCLYGLDADLIML L THE +FS+LR
Sbjct: 193 VILSDANVPGEGEHKVMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLALATHEVHFSILR 252
Query: 296 E------------------------EVKFNTKS---NKGGSQIVTPEETKFFLLHLSLMR 328
E E K K+ ++ G IV + +F L++ +R
Sbjct: 253 EVVFTPGQQEKCFLCGQVGHLAAKCEGKAKRKAGEFDEKGDAIVPKKPYQF--LNIWTLR 310
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
+Y+E EF P F +E IIDD++ M F +GNDF+P++P L I GA+ LL V
Sbjct: 311 EYIEYEFRMPNPP----FQIDLERIIDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 366
Query: 389 YQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
Y++ P++ GY+ + +L R E F+ + S++ + F+++
Sbjct: 367 YKKEFPSMGGYLTDACTPDLNRVEHFIQAVGSYEDKIFQKR 407
Score = 164 bits (414), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 125/238 (52%), Gaps = 19/238 (7%)
Query: 452 KSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSE-FGQHKTD 510
+ +E D+ +++K + D + N N EE + WR ++ + FG +
Sbjct: 503 QERENKEDMKSMLKDALREKSD----LFNSENPEEDKVKLGEPGWRERYYEDKFGARTPE 558
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
E+ RD Y + W +HYYY G SW W+YP+HYAP+ SD+K
Sbjct: 559 Q----------IEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKGLG 608
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
LN+ + +G PF PF QL+ V PAAS LP Y+ LM+ NSPI+++YP +F D+NGK
Sbjct: 609 ELNITFNLGSPFKPFDQLMGVFPAASSHALPLQYRKLMSDPNSPIIDFYPIDFEVDMNGK 668
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAP 688
+ W+ + +PFIDE +L+ + VEH LT EE RN +Y VN L+P
Sbjct: 669 RFSWQGIAKLPFIDESRLLAEIKKVEHTLTPEEARRNS----TMYNMLFVNGSHPLSP 722
Score = 114 bits (286), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 21/122 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREY--------QIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + V E ++P EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKVPVDTSKPNPNSLEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D T ++FQ +F YI+ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPS--PTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FR 103
FR
Sbjct: 119 FR 120
>gi|444523968|gb|ELV13670.1| 5'-3' exoribonuclease 1 [Tupaia chinensis]
Length = 592
Score = 227 bits (579), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 173/302 (57%), Gaps = 43/302 (14%)
Query: 310 QIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFI 369
++ PEET F LLHLSLMR+Y++ EF LKE ++F + IE IIDDW+LMGFL+GNDFI
Sbjct: 103 RVCAPEETTFHLLHLSLMREYIDYEFSALKEK--ITFKYDIERIIDDWILMGFLVGNDFI 160
Query: 370 PNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
P+LP LHI + ALPLLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E
Sbjct: 161 PHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEV 220
Query: 430 YADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD------YDDGTEEVLNYAN 483
+ D+++ E K+G K+ + ++E ++ D EV+ +
Sbjct: 221 FVDLKWFESKVGNKYLNEAAGVAAEEAKNYKEKKKLKGQENSLCWAALDKSEGEVVTSKD 280
Query: 484 YEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHY 543
E D+D F +EF Q+K YY K+
Sbjct: 281 NLEDEAEDDDL-----FETEFRQYKRTYYMTKM--------------------------- 308
Query: 544 YYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEP 603
G S +YP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP
Sbjct: 309 ---GVDIVSEFYPYHYAPFLSDIRNISTLEIHFELGKPFKPFEQLLAVLPAASKNLLPTC 365
Query: 604 YQ 605
YQ
Sbjct: 366 YQ 367
Score = 195 bits (496), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 83/103 (80%), Positives = 98/103 (95%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEF NLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFANLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFR 103
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFR
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFR 103
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 1119 TC---EKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRG 1175
TC K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+G RG
Sbjct: 364 TCYQQRKSNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPVGLRG 423
Query: 1176 TIIGI 1180
TIIGI
Sbjct: 424 TIIGI 428
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFR 164
+ + P+K+FFMA+DGVAPRAKMNQQRGRRFR
Sbjct: 70 VLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFR 103
>gi|47214629|emb|CAG01470.1| unnamed protein product [Tetraodon nigroviridis]
Length = 836
Score = 226 bits (577), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 150/460 (32%), Positives = 222/460 (48%), Gaps = 102/460 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ + PN N+ F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEEKGKECNGVRIPVD-----TTRPNPNEVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE-AEVLEQKAK 177
F++I F P+++ +MAIDGVAPRAKMNQQR RRFR++KE AE++E+K +
Sbjct: 75 DEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRASKEGAELVEEKKR 134
Query: 178 EKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVI 237
+ E GT FM L + LRY++ ++ D W+++ V
Sbjct: 135 IREE---------------GTEFMDNLAKCLRYYIADRLNNDP---------GWRNITVF 170
Query: 238 LSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE 297
LS PGEGEHKIMD+IR +++P+++PN HCL G DADLIMLGL THEP F+++REE
Sbjct: 171 LSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREE 230
Query: 298 VKFN--------------------TKSNKGG-----SQIVTPEETKFFLLHLSLMRDYLE 332
K N T K G + + E +F + L ++R+YL
Sbjct: 231 FKPNKPRPCALCGQLGHEIKDCQGTAREKKGEHDEFADSMPVAEQEFIFIRLCVLREYLA 290
Query: 333 LEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEV 392
E L FPF E +DDWV M F +GNDF+P+LP L I GA+ L +Y++V
Sbjct: 291 RELTM----ASLPFPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKDV 346
Query: 393 LPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
+ GY+ E GY+ L+R E + + + F+++ D
Sbjct: 347 VHKTGGYLTENGYVKLERVEMIMQAVGVAEDNIFKKRKED 386
Score = 162 bits (410), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 103/169 (60%), Gaps = 1/169 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + + R + Y+ + W L YYY GC SW WY+P HYAP+ SD K
Sbjct: 504 KQRYYKNKFDVDVMDEDFRRKVVQSYVEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFK 563
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
D + ++E G +PF P +QL+ V PAAS LPE ++NLM+ +S I+++YPE+FA D
Sbjct: 564 DIKGMFSEFEKGTKPFKPLEQLMGVFPAASGNFLPETWRNLMSSPDSSIIDFYPEDFAID 623
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
LNGKK W+ V L+PF+DE +L A+ V LT EE RN G ++
Sbjct: 624 LNGKKYAWQGVALLPFVDERRLRAALADVYPDLTPEEEKRNSLGSDFIF 672
>gi|242056911|ref|XP_002457601.1| hypothetical protein SORBIDRAFT_03g010040 [Sorghum bicolor]
gi|241929576|gb|EES02721.1| hypothetical protein SORBIDRAFT_03g010040 [Sorghum bicolor]
Length = 1066
Score = 226 bits (576), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 202/372 (54%), Gaps = 57/372 (15%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK------ 179
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFR+AK+A + +
Sbjct: 82 FDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLREEFER 141
Query: 180 -GERLPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
G +LP +++ DSN ITPGT FM L L+Y++ L++ D WK +
Sbjct: 142 EGRKLPPKQQSQTCDSNVITPGTEFMAVLSVALQYYIHLRLNYDP---------GWKQIK 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ +NPN RHCLYGLDADLIML L THE +FS+LR
Sbjct: 193 VILSDANVPGEGEHKIMSYIRGQRNLSGFNPNTRHCLYGLDADLIMLALATHEVHFSILR 252
Query: 296 EEVKFNTKSNK---------------------------GGSQIVTPEETKFFLLHLSLMR 328
E V + +K G IV + +F L++ +R
Sbjct: 253 EVVYTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEFDEKGDAIVPKKPYQF--LNIWTLR 310
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
+YLE EF P F E I+DD++ M F +GNDF+P++P L I GA+ LL V
Sbjct: 311 EYLEYEFRMPNPP----FKIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 366
Query: 389 YQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVF 448
Y++ P++ GY+ + +L R E F+ + S++ + F +K A + + + K+ D
Sbjct: 367 YKKEFPSMGGYLTDSCTPDLSRVEHFIQAVGSYEDKIF-QKRARLHQRQAERIKR--DKA 423
Query: 449 HKEKSKEMDPDL 460
++ ++DP +
Sbjct: 424 QAKRGDDLDPHV 435
Score = 166 bits (421), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 109/192 (56%), Gaps = 11/192 (5%)
Query: 477 EVLNYANYEEYYYSDEDEEWRTNFFSE-FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIR 535
++ N N +E + WR ++ E FG + E+ RD Y
Sbjct: 524 DIFNSDNPDEDKVKLGEPGWRERYYEEKFGARTPEQ----------IEEIRRDVVLKYTE 573
Query: 536 AIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAA 595
+ W +HYYY G SW W+YP+HYAP+ SD+ LN+K+E+G PF PF QL+ V PAA
Sbjct: 574 GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNIKFELGTPFKPFDQLMGVFPAA 633
Query: 596 SKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
S LP Y+ LMT +SPI+++YP +F D+NGK+ W+ + +PFIDE +L+ + V
Sbjct: 634 SAHALPLQYRQLMTDPHSPIIDFYPIDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKV 693
Query: 656 EHLLTDEERSRN 667
EH LT EE RN
Sbjct: 694 EHTLTPEEARRN 705
Score = 115 bits (287), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 21/122 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREY--------QIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + V E ++P EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D T ++FQ +F YI+ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPS--PTTFAEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FR 103
FR
Sbjct: 119 FR 120
>gi|162606084|ref|XP_001713557.1| very similar to mouse Dhm1 and Dhm2 [Guillardia theta]
gi|13794477|gb|AAK39852.1|AF165818_60 very similar to mouse Dhm1 and Dhm2 [Guillardia theta]
Length = 542
Score = 226 bits (575), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 153/424 (36%), Positives = 213/424 (50%), Gaps = 86/424 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +++ +I EK
Sbjct: 1 MGVPKFFRWLSERYPLINQ----------------------------------KIFEKSE 26
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F F++ ++G+ + F ++L QK + E
Sbjct: 27 FD-----------------CFYLDMNGIIHTCFQKIASEQNFNK----DILFQKIFDYTE 65
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
L T PKKL ++AIDGVAPRAKMNQQR RRFR+ K+ E K +
Sbjct: 66 YLYT----------IIHPKKLLYLAIDGVAPRAKMNQQRSRRFRAIKDNE----KKSDFD 111
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
R DSNCITPGT FM L + +++ KI TD W+ +I SG
Sbjct: 112 HRNRLNLTLDSNCITPGTSFMAELSYAFKIWLEKKIKTDIEWQTGCD--------IIFSG 163
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNM--RHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
E PGEGEHKIM++IR +K+ + NP++ HCLYGLDADLIMLGL +HE F+LLRE++
Sbjct: 164 AEVPGEGEHKIMNFIRKLKNLKN-NPDLILSHCLYGLDADLIMLGLVSHEKNFTLLREKL 222
Query: 299 KFNTKSNKGGSQIVTPEET---KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIID 355
+ SN E++ F LL +SL+R+ L LEF + L +++E I+D
Sbjct: 223 AWKGTSNVKEGYNYEFEKSPSDDFHLLEISLLREMLYLEF---RPREFLDQDYNMERIVD 279
Query: 356 DWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFL 415
D+V M LIGNDF+P +P L I G L LL + Y+E+ + GY+ +++ R E F
Sbjct: 280 DFVFMCMLIGNDFLPGIPHLDIGYGGLNLLVRSYKEIQKHIHGYLTNKSKIHVGRAELFF 339
Query: 416 TKLA 419
KL+
Sbjct: 340 EKLS 343
Score = 144 bits (362), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 117/189 (61%), Gaps = 5/189 (2%)
Query: 485 EEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTN-EVLRDQAECYIRAIQWNLHY 543
EE Y+ ++ + N S +K +YY KL+ + N E + D + YI + W L+Y
Sbjct: 347 EELYFLNKGNDIENNLCS--NDYKMEYYVKKLNCSVSNNKERINDLIQTYIEGLHWCLYY 404
Query: 544 YYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEP 603
Y+ GC SW+W+YP +YAP SD+K + +K++ G+PF P QLLAVLP S+ LLP
Sbjct: 405 YHKGCPSWNWFYPEYYAPLASDLKSLKKIKIKFKKGKPFEPLVQLLAVLPPNSRNLLPIS 464
Query: 604 YQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVE--HLLTD 661
+ LM ++SP+++YYP E+ D+NGKK WE VV++PFI+E L+ +D ++ L D
Sbjct: 465 FSRLMVKKDSPVIDYYPLEYKIDMNGKKNLWEGVVILPFINESNLVLTLDNMKTRSTLND 524
Query: 662 EERSRNRHG 670
EE +RN G
Sbjct: 525 EENTRNSFG 533
>gi|385303535|gb|EIF47601.1| 5 -3 exoribonuclease 1 [Dekkera bruxellensis AWRI1499]
Length = 646
Score = 225 bits (573), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/320 (39%), Positives = 184/320 (57%), Gaps = 13/320 (4%)
Query: 503 EFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
+F K YY KL + + + D E Y+ +QW L+YYY G SW WYY +HYAP
Sbjct: 101 KFLDWKNQYYKEKLHFTLDDEDKITDLTENYVEGLQWVLNYYYKGVCSWPWYYHYHYAPR 160
Query: 563 ISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
ISD+ + L ++MG+PF PFQQL+ VLPA S+ LLP YQ LMT SPI+++YP +
Sbjct: 161 ISDVSRGLGVKLNFKMGQPFKPFQQLMGVLPARSRRLLPACYQELMTDAKSPIIDFYPND 220
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS--NV 680
TD+NGK WEAVVL+ F+DE +LIK M ++ LT EE+ RN G L++ ++
Sbjct: 221 CETDMNGKTAPWEAVVLLSFVDEKRLIKVMTPLDKYLTPEEKQRNTFGRNLLFQFNPQVK 280
Query: 681 NLGTALAPDYFPAINE---NHAVEKPLYRDDIYVHPNKLRKGLCQD-VNLKLYVTHFPTL 736
N + P++ P E P + YV KG+C+D ++ K + FPTL
Sbjct: 281 NPIRSXLPEWLPDFESRCVQSVFELPSMKGLTYV------KGMCKDALSGKHALAGFPTL 334
Query: 737 KHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIE 795
+ +T K+E A + VFQQPSR+ S+I+ +++ + S++Q A Q LG I+ NYP+L E
Sbjct: 335 STIPYTAKLEYAHLCVFQQPSRSVSMILTLKNIYKGLSVEQFAKQHLGNIIYANYPYLRE 394
Query: 796 IRVQAVATKDSRISFDKNSG 815
++ + R F + G
Sbjct: 395 YKLCHIDDGXKRFEFIRXRG 414
>gi|221054456|ref|XP_002258367.1| exoribonuclease [Plasmodium knowlesi strain H]
gi|193808436|emb|CAQ39139.1| exoribonuclease, putative [Plasmodium knowlesi strain H]
Length = 1324
Score = 225 bits (573), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 161/538 (29%), Positives = 254/538 (47%), Gaps = 117/538 (21%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPE-------FDNLYLDMNGIIHNCSHPNDNDPHF 53
MGVP F+R++ RYP +++ E + + + + D G P+ +D
Sbjct: 1 MGVPTFYRWLVTRYPKIAKATYETRDSDVYARRTKIQDGHRDAEGKA-TYRVPDLSDYVN 59
Query: 54 RITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQ 113
E +I Y + L+ + ++G+ + RR +S +E +
Sbjct: 60 NTDENHCSDNINGYFDNLY----------LDMNGIIHLCS-HSDNSRRAKSNEEIFL--- 105
Query: 114 KAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLE 173
L E+ FD I P+KL +MAIDGVAP+AKMNQQR RRF+S +E+
Sbjct: 106 -----NIFLYIERLFDIIE-----PRKLLYMAIDGVAPKAKMNQQRSRRFKSILCSEIER 155
Query: 174 QKAKEKGERLPTEKR--------FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
+ E E+ +E R +DSN ITPGT FM L L+YFV+ KIT D WK+
Sbjct: 156 KAYIELREKFLSENREVPEEFTFWDSNIITPGTQFMYELSVALKYFVEHKITNDDKWKNI 215
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
+ ++ +VC GEGEHKI ++I+ + +P Y+PN RH ++G+DADLIML L
Sbjct: 216 VVIFSDANVC---------GEGEHKIYNFIKSQRGQPGYDPNTRHVIHGMDADLIMLSLA 266
Query: 286 THEPYFSLLREEVKFNTKS----------------------------------------- 304
+HEPYF +LRE + ++K
Sbjct: 267 SHEPYFYILREIIILDSKGEEKVQDKDFVGKLKSKQDLPLCTTHMRKTKKIYTKYNDPHY 326
Query: 305 ---NKGGSQIVTPEE-TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
NK + + E + +L L+++R+YL EF +++E IDD++ +
Sbjct: 327 ANINKSPNYSINDENWNELQILDLTILREYLSKEF-------FFDSSYNLERCIDDFIFI 379
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
FL GNDF+P+LP + I G++ L +YQ+VLP L Y+ G +NLK F K+++ +A
Sbjct: 380 CFLCGNDFLPHLPSISIAAGSIDQLVLLYQKVLPVLGDYLINEGKINLKPFSKYVSFIAE 439
Query: 421 FDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEV 478
+ E F +Y D K + ++ D +K TD++ +DG+ +
Sbjct: 440 VERETFISQY---------------DFKKKREKRDQQKDSLKRVKCTDEE-NDGSGNI 481
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 99/162 (61%), Gaps = 1/162 (0%)
Query: 514 YKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLN 573
+ LD ++ +++ YI + W L YY+ C W WYYP++YAP SD+ ++N
Sbjct: 734 FHLDETDYIDDFVKEVVYKYIEGLAWVLSYYFQSCPMWHWYYPYYYAPLSSDLI-IDNVN 792
Query: 574 LKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQD 633
++ EP LP +QLL VLP+ S LP+ Y+ LM +SPI+++YP+ F + NGKK
Sbjct: 793 FIFQKDEPILPLEQLLCVLPSNSSHCLPKGYRELMVRPDSPIIDFYPKTFKEEENGKKYK 852
Query: 634 WEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
++ V+L+PF+D+ ++IK + LT+EE+ RNR G +Y
Sbjct: 853 YQWVILLPFVDKERIIKHARELNDTLTEEEKKRNRRGMNKIY 894
>gi|124506737|ref|XP_001351966.1| exoribonuclease, putative [Plasmodium falciparum 3D7]
gi|23504994|emb|CAD51777.1| exoribonuclease, putative [Plasmodium falciparum 3D7]
Length = 1311
Score = 224 bits (571), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 154/488 (31%), Positives = 238/488 (48%), Gaps = 101/488 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP F+R++ RYP +++ V E + + + + ++N +F++ +
Sbjct: 1 MGVPTFYRWLVTRYPKIAKAVYETRDSD----------VYSRRTKYDENGEYFKVHD--- 47
Query: 61 FQDIFHYIEILFRMIQPKKLF---FMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 117
D + + L F ++ ++G+ + +R +S +E +
Sbjct: 48 LNDYVNNTDELHCSDNINGYFDNMYLDMNGIIHLCS-HSDNSKRAKSNEEIFL------- 99
Query: 118 KGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 177
L E+ FD I PKKL +MAIDGVAP+AKMNQQR RRF+S +E+ ++
Sbjct: 100 -NVFLYVERLFDIIE-----PKKLLYMAIDGVAPKAKMNQQRSRRFKSISCSEIEKRAYL 153
Query: 178 EKGERLPTEKR--------FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLW 229
E ER E + +DSN ITPGT FM L L+YF++ KIT D+
Sbjct: 154 ELKERFIAENKMVPEETTYWDSNVITPGTEFMHELSIALKYFIEHKITNDE--------- 204
Query: 230 VWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEP 289
WK+V VI S GEGEHKI ++I+ +++P Y+PN RH ++G+DADLIML L +HEP
Sbjct: 205 KWKNVVVIFSDSNVCGEGEHKIFNFIKSQRAQPGYDPNTRHVIHGMDADLIMLSLASHEP 264
Query: 290 YFSLLRE--------------------------------------EVKFNTKSNKGGSQI 311
YF +LRE E K K N
Sbjct: 265 YFYILREIIDLDPKSEEKEKTKKKEYVGMLKSYDDLHFCTRYAKKEKKLFNKYNDPNYAN 324
Query: 312 VTPEE---------TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGF 362
VT + + +L L+++R+YL LK+ F++E +DD++ + F
Sbjct: 325 VTISKNASLNYEYWNELQILDLTILREYL------LKDL-FFDTSFNMERCLDDFIFICF 377
Query: 363 LIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFD 422
GNDF+P+LP + I G++ L +YQ+VLPTL Y+ G +NLK F K+++ +A +
Sbjct: 378 FCGNDFLPHLPSISIAGGSIDQLILLYQKVLPTLGDYLINEGSINLKSFTKYISFIAEVE 437
Query: 423 FEQFREKY 430
E F +Y
Sbjct: 438 RETFVSQY 445
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 101/174 (58%), Gaps = 1/174 (0%)
Query: 514 YKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLN 573
+ LD + ++D Y+ + W L YY+ C W WYYP++YAP SD+ ++
Sbjct: 712 FHLDDNDAIEDFIKDVVYKYVEGLAWVLAYYFQSCPMWHWYYPYYYAPLSSDLI-VDNIT 770
Query: 574 LKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQD 633
+E EP LPF+QLL VLPA S LP+ Y+ LM ++SPI+++YP F + NGKK
Sbjct: 771 FNFEKDEPLLPFEQLLCVLPANSSHCLPKMYKQLMLHKDSPIIDFYPHTFKEEQNGKKYK 830
Query: 634 WEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALA 687
++ ++L+PF+D+ ++IK + L ++E+ RNR G +Y SN L +
Sbjct: 831 YQWIILLPFVDKERIIKHARPLHDTLNNDEKKRNRRGLNKIYVSSNHPLSKTIT 884
>gi|224587591|gb|ACN58687.1| 5-3 exoribonuclease 2 [Salmo salar]
Length = 713
Score = 224 bits (570), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 208/447 (46%), Gaps = 61/447 (13%)
Query: 284 LCTHEPYFSLLREEVKFN-----TKSNKGGSQI--------------------VTPEETK 318
L THEP F+++REE K N + G ++ + E +
Sbjct: 1 LATHEPNFTIIREEFKPNQPRPCAMCGQKGHELKDCQGVAREKQGEHDEFADAMPASEQE 60
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
F + L ++R+YLE E P FPF E +DDWV M F +GNDF+P+LP L I
Sbjct: 61 FIFIRLCVLREYLERELTMASLP----FPFDFERTVDDWVFMCFFVGNDFLPHLPSLEIR 116
Query: 379 NGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL-- 436
GA+ L +Y++V+ GYI E G++ L+ E + + + F+++ D +
Sbjct: 117 EGAIDRLVGIYKDVVHKTGGYITENGFVKLESVELIMQAIGVAEDNIFKKRKEDDEGFKR 176
Query: 437 --------------------------EGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD 470
+ G+ +V + + D + +
Sbjct: 177 RNKEKKKRMKAQQQGPSFLTSGQFAPQALGGRGRPEVVQNARHQAFDMRMQGRDQHNRAG 236
Query: 471 YDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQA 530
DG ++ E S+ D E + + K YY K D ++ +
Sbjct: 237 TSDG-QDGRGVKRKAEDSDSEPDPEDNVRLWED--GWKQRYYKTKFDVDATDDDFRKKVV 293
Query: 531 ECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG-EPFLPFQQLL 589
Y+ + W L YYY GC SW WY+P HYAP+ SD KD + +E+G +PF P +QL+
Sbjct: 294 MSYVEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFKDIKGMFTDFELGTKPFKPLEQLM 353
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
V PAAS LPE +++LM+ S I+++YP++FA DLNGKK W+ V L+PF+DE +L
Sbjct: 354 GVFPAASGNFLPETWRSLMSNPESSIIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLR 413
Query: 650 KAMDAVEHLLTDEERSRNRHGPMLVYT 676
A+ V L+ EE RN G +++
Sbjct: 414 AALAEVYPNLSPEENKRNSLGSDMLFV 440
>gi|359492219|ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1065
Score = 224 bits (570), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 190/342 (55%), Gaps = 55/342 (16%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK------ 179
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFR+AK+A + +
Sbjct: 82 FDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLREEFEK 141
Query: 180 -GERLPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
G +LP +++ DSN ITPGT FM L L+Y++ L++ D WK +
Sbjct: 142 EGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIHLRLNNDP---------GWKSIK 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLIML L THE +FS+LR
Sbjct: 193 VILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATHEVHFSILR 252
Query: 296 EEV----------------------------KFNTKSNKGGSQIVTPEETKFFLLHLSLM 327
E V K KG S V + +F L++ +
Sbjct: 253 EIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVVKKPYQF--LNIWTL 310
Query: 328 RDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYK 387
R+YLE E ++ P L F E+I+DD++ M F +GNDF+P++P L I GA+ LL
Sbjct: 311 REYLEYE---MRIPN-LPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMA 366
Query: 388 VYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
VY++ L + GY+ + NL E F+ + S++ + F+++
Sbjct: 367 VYKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKR 408
Score = 169 bits (429), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 102/159 (64%), Gaps = 4/159 (2%)
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVL 592
Y + W +HYYY G SW W+YP+HYAP+ SD+KD LN+ +E+G PF PF QLL V
Sbjct: 572 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVF 631
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAM 652
PAAS LPE Y+ LMT NSPI+++YP +F D+NGK+ W+ + +PFIDE +L+ +
Sbjct: 632 PAASSHALPEEYRKLMTDPNSPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEV 691
Query: 653 DAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYF 691
+EH LT+EE RN +++ V L L+P F
Sbjct: 692 QKIEHTLTEEEFRRNS----VMFDMLFVALSHPLSPYIF 726
Score = 117 bits (292), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 79/122 (64%), Gaps = 21/122 (17%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------YQIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + +V+ E IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D T ++FQ +F YI+ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPS--PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FR 103
FR
Sbjct: 119 FR 120
>gi|294953215|ref|XP_002787652.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239902676|gb|EER19448.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 982
Score = 223 bits (569), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 134/351 (38%), Positives = 201/351 (57%), Gaps = 46/351 (13%)
Query: 133 LKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-------EVLEQKAKEKGERLPT 185
++ P+KL ++AIDGVAPRAKMNQQR RRF++A+EA E L ++ ++G P+
Sbjct: 97 VRIVRPRKLLYVAIDGVAPRAKMNQQRARRFKAAQEATEQMKEEEKLRRQMVKEGREPPS 156
Query: 186 EKR--FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHET 243
+K +DSN ITPGTPF+ ++ L +++ ++T D LW+ L ++ ILS +
Sbjct: 157 KKGVPWDSNVITPGTPFLDKVAHMLHWYISDRMTNDPLWQ----LLGFR---CILSDAGS 209
Query: 244 PGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV----- 298
PGEGEHKIMD+IR + YNPN H LYG DADLIMLGL THE F ++RE V
Sbjct: 210 PGEGEHKIMDFIRKQRMMEGYNPNTTHMLYGADADLIMLGLATHEISFYIIREVVLKPEE 269
Query: 299 ----------KFNTKSNKGGSQIVTPEETK----------FFLLHLSLMRDYLELEFGKL 338
++ Q +E++ F ++ L ++R+YL +F
Sbjct: 270 RKCYLCGKVGHLPSECTGDDQQPDLGDESEEDEDMLEMKPFQIISLPVLREYLVEQFTTA 329
Query: 339 KEP----GVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLP 394
P +L FPF +E +IDD+V M F +GNDF+P+LP L+I +G++ + +Y E+LP
Sbjct: 330 FCPPNQKCILPFPFDVERVIDDFVFMCFFVGNDFLPHLPSLNIRDGSIDQMICLYVEILP 389
Query: 395 TLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYA-DIQYLEGKMGKKF 444
TL Y+ G +NL + E FL L + E FR + A D ++ + ++ +F
Sbjct: 390 TLTDYLTCQGEVNLVQVEVFLDYLGRVEDEVFRRRLARDDRFKQQRLQGRF 440
Score = 140 bits (354), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 106/196 (54%), Gaps = 11/196 (5%)
Query: 501 FSEFGQHKTDYYHYKLDYAKVTNEVLRD----QAECYIRAIQWNLHYYYNGCVSWSWYYP 556
E G+H +Y D VT E D + Y+ I W L YYY G VSW W+YP
Sbjct: 557 LGEGGEHSWKQRYYT-DKFHVTQEDFADFIPRIRKAYVEGICWVLQYYYQGVVSWDWFYP 615
Query: 557 HHYAPYISDIKDFSHLNLK----YEMGEPFLPFQQLLAVLPAASK--ELLPEPYQNLMTL 610
+HYAP+ +D+ S L Y G+PFLP QQL++VLP S +P Q LMT
Sbjct: 616 YHYAPFATDLVGCSALECNKASYYTKGKPFLPLQQLMSVLPPRSGPPADIPVEMQKLMTE 675
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
NS I+++YPE+FA DLNGKK W+AV+L+PFI + +LI A+ L E + RN
Sbjct: 676 PNSSIIDFYPEDFALDLNGKKFTWQAVILLPFIIQDRLIAALQPFIDKLDGERKRRNTPA 735
Query: 671 PMLVYTYSNVNLGTAL 686
++ + N L L
Sbjct: 736 EPRLFVHMNDTLAPQL 751
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 38/161 (23%)
Query: 1 MGVPKFFRYISERYP----------CL------SEVVREYQIP-----------EFDNLY 33
MGVP FFR++ RYP C+ + Y +P EFDNLY
Sbjct: 1 MGVPTFFRWLCTRYPKVIKDAVEKVCIEVPGEGGDGANTYDVPVDFEEPNPNGIEFDNLY 60
Query: 34 LDMNGIIHNCSHPNDN-DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRA 92
LD+NGIIH C HP D P E +F +I Y++ L R+++P+KL ++AIDGVAPRA
Sbjct: 61 LDLNGIIHPCCHPEDGMTPE---NEDVMFLNIMRYVDRLVRIVRPRKLLYVAIDGVAPRA 117
Query: 93 KMNQQRGRRFRSAKEA-------EVLEQKAKEKGERLPTEK 126
KMNQQR RRF++A+EA E L ++ ++G P++K
Sbjct: 118 KMNQQRARRFKAAQEATEQMKEEEKLRRQMVKEGREPPSKK 158
>gi|449019490|dbj|BAM82892.1| 5'->3' exoribonuclease [Cyanidioschyzon merolae strain 10D]
Length = 1363
Score = 223 bits (569), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 233/477 (48%), Gaps = 101/477 (21%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNL----YLDMNGIIH-NCSHPNDNDPHFR 54
MG+ FFR++ RYP L V E + + L YLD N +H + S PN N F
Sbjct: 1 MGIASFFRWVVARYPRALQAAVEEAPVTDQAALENGNYLDDNDYLHVDVSLPNPNGEEF- 59
Query: 55 ITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQK 114
L+F ++GV M R A E ++ +
Sbjct: 60 -----------------------SNLYF-DLNGVV---HMCTHPEDRPPPATEEDMFQD- 91
Query: 115 AKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEV--- 171
+ D I + P++L ++AIDGVAPRAK+NQQR RRFR+AKEA
Sbjct: 92 ---------VFRYMDRI-VALVRPRRLIYIAIDGVAPRAKINQQRTRRFRAAKEAREKTE 141
Query: 172 ----LEQKAKEKGERLPTE--KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
L +E+G R+P + K FDSN ITPGT FM RL LR +++ +I
Sbjct: 142 EEEKLRALWREQGLRVPPKPKKPFDSNVITPGTLFMERLAVALRRYIRERIR-------- 193
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
S W+ + VILS PGEGEHKI ++IR +++P Y+P RH LYGLDADLIML L
Sbjct: 194 -SCPAWRSLVVILSDASVPGEGEHKIAEFIRTQRAQPGYDPETRHVLYGLDADLIMLALA 252
Query: 286 THEPYFSLLREEVKFNTKSNK--------------------------GGSQIVTPEETKF 319
THEP+F +LRE + F+++++K G + PE F
Sbjct: 253 THEPHFFILRERIYFDSRADKAIQAVKAMNAQQTPAGDRIDHKTGTSAGPGLPLPER-PF 311
Query: 320 FLLHLSLMRDYLELEF------GKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLP 373
+ +R+YL+ EF +++P P +E +DD+V + F +GNDF+P+LP
Sbjct: 312 DFFRIDRLREYLQAEFRDALQHDAVRQP---REPLDVEIALDDFVFLCFFVGNDFLPHLP 368
Query: 374 DLHIINGALPLLYKVYQEVLPTLDGYINEG-GYLNLKRFEKFLTKLASFDFEQFREK 429
L I GA+ L +VY+ + G++ +G G ++ R + L +A + FRE+
Sbjct: 369 SLEIREGAIDFLLEVYKYKFQRI-GHLTDGHGGIHFDRVRELLRDVAHVEDSVFRER 424
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 103/198 (52%), Gaps = 16/198 (8%)
Query: 496 WRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYY 555
WR ++ ++ + H+ + + L+ Y + W YYY GC SW W+Y
Sbjct: 813 WRERYY------QSKFPHWPPLDTEAGAQALQRLCRAYYEGLLWVYRYYYAGCPSWGWFY 866
Query: 556 PHHYAPYISDIKD--FSHLNLKYEMGEPFLPFQQLLAVLPAAS-KELLPEPYQNLMTLEN 612
P+HYAP SD+ ++ +E G PF P +QL+AVLPA+S + LP LM +
Sbjct: 867 PYHYAPLASDLAQCCVDQKDIVFERGAPFTPLEQLMAVLPASSGAQCLPRILYELMINPH 926
Query: 613 SPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGP- 671
SPI+EYYP +FA D NGK+ W+ V L+PF+DE +L A+ +V L D + H P
Sbjct: 927 SPIIEYYPTDFAIDYNGKRFAWQGVALLPFVDEQRLRLAIQSV---LQDGRAADREHDPD 983
Query: 672 ---MLVYTYSNVNLGTAL 686
ML GTA+
Sbjct: 984 KRRMLERADPTRAFGTAI 1001
>gi|414876883|tpg|DAA54014.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea mays]
Length = 1066
Score = 223 bits (569), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 136/342 (39%), Positives = 191/342 (55%), Gaps = 56/342 (16%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK------ 179
FD+I F P++L +MAIDGVAPRAKMNQQR RRFR+AK+A + +
Sbjct: 82 FDYIDRLFVMVRPRRLLYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLREEFER 141
Query: 180 -GERLPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
G +LP +++ DSN ITPGT FM L L+Y++ ++ D WK +
Sbjct: 142 EGRKLPPKQQSQTCDSNVITPGTEFMAVLSVALQYYIHRRLNYDP---------GWKQIK 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ +NPN RHCLYGLDADLIML L THE +FS+LR
Sbjct: 193 VILSDANVPGEGEHKIMSYIRGQRNLSGFNPNTRHCLYGLDADLIMLALATHEVHFSILR 252
Query: 296 E------------------------EVKFNTKSN----KGGSQIVTPEETKFFLLHLSLM 327
E E K K+ KGG+ + P++ F L++ +
Sbjct: 253 EVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGGA--IVPKKPYQF-LNIWTL 309
Query: 328 RDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYK 387
R+YLE EF P F E I+DD++ M F +GNDF+P++P L I GA+ LL
Sbjct: 310 REYLEYEFRMPNPP----FKIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMA 365
Query: 388 VYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
VY++ P++ GY+ + +L R E F+ + S++ + F+++
Sbjct: 366 VYKKEFPSMGGYLTDSCTPDLSRVEHFIQAVGSYEDKIFQKR 407
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 109/192 (56%), Gaps = 11/192 (5%)
Query: 477 EVLNYANYEEYYYSDEDEEWRTNFFSE-FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIR 535
++ N N EE + WR ++ E FG + E+ RD Y
Sbjct: 524 DIFNSDNPEEDKVKLGEPGWRERYYEEKFGARTPEQ----------IEEIRRDVVLKYTE 573
Query: 536 AIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAA 595
+ W +HYYY G SW W+YP+HYAP+ SD+ LN+K+E+G PF PF QL+ V PAA
Sbjct: 574 GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNIKFELGTPFKPFDQLMGVFPAA 633
Query: 596 SKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
S LP Y+ LMT NSPI+++YP +F D+NGK+ W+ + +PFIDE +L+ + V
Sbjct: 634 SAHALPLQYRRLMTDPNSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEDRLLAEIKKV 693
Query: 656 EHLLTDEERSRN 667
EH LT EE RN
Sbjct: 694 EHTLTPEEARRN 705
Score = 114 bits (284), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 78/122 (63%), Gaps = 21/122 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREY--------QIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + V E ++P EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKVPVDTSKPNPNSLEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D T ++FQ +F YI+ LF M++P++L +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPS--PTTFGEVFQCMFDYIDRLFVMVRPRRLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FR 103
FR
Sbjct: 119 FR 120
>gi|302142638|emb|CBI19841.3| unnamed protein product [Vitis vinifera]
Length = 870
Score = 223 bits (567), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 190/342 (55%), Gaps = 55/342 (16%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK------ 179
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFR+AK+A + +
Sbjct: 82 FDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLREEFEK 141
Query: 180 -GERLPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
G +LP +++ DSN ITPGT FM L L+Y++ L++ D WK +
Sbjct: 142 EGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIHLRLNNDP---------GWKSIK 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLIML L THE +FS+LR
Sbjct: 193 VILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATHEVHFSILR 252
Query: 296 EEV----------------------------KFNTKSNKGGSQIVTPEETKFFLLHLSLM 327
E V K KG S V + +F L++ +
Sbjct: 253 EIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVVKKPYQF--LNIWTL 310
Query: 328 RDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYK 387
R+YLE E ++ P L F E+I+DD++ M F +GNDF+P++P L I GA+ LL
Sbjct: 311 REYLEYE---MRIPN-LPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMA 366
Query: 388 VYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
VY++ L + GY+ + NL E F+ + S++ + F+++
Sbjct: 367 VYKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKR 408
Score = 170 bits (430), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 102/159 (64%), Gaps = 4/159 (2%)
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVL 592
Y + W +HYYY G SW W+YP+HYAP+ SD+KD LN+ +E+G PF PF QLL V
Sbjct: 572 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVF 631
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAM 652
PAAS LPE Y+ LMT NSPI+++YP +F D+NGK+ W+ + +PFIDE +L+ +
Sbjct: 632 PAASSHALPEEYRKLMTDPNSPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEV 691
Query: 653 DAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYF 691
+EH LT+EE RN +++ V L L+P F
Sbjct: 692 QKIEHTLTEEEFRRNS----VMFDMLFVALSHPLSPYIF 726
Score = 117 bits (293), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 79/122 (64%), Gaps = 21/122 (17%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------YQIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + +V+ E IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D T ++FQ +F YI+ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPSP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FR 103
FR
Sbjct: 119 FR 120
>gi|413921160|gb|AFW61092.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
Length = 1079
Score = 222 bits (565), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 190/341 (55%), Gaps = 54/341 (15%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGER--- 182
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFR+AK+A + + E
Sbjct: 82 FDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLREEFER 141
Query: 183 ----LPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
LP +++ DSN ITPGT FM L L+Y++ ++ D WK +
Sbjct: 142 EGRRLPAKQQSQTCDSNVITPGTEFMAVLSVALQYYIHQRLNYDP---------GWKKIK 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ P +NPN RHCLYGLDADLIML L THE +FS+LR
Sbjct: 193 VILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLALATHEVHFSILR 252
Query: 296 E------------------------EVKFNTKS---NKGGSQIVTPEETKFFLLHLSLMR 328
E E K K+ ++ G IV + +F L++ +R
Sbjct: 253 EVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEYDEKGEAIVPKKPYQF--LNIWTLR 310
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
+YLE EF P F E I+DD++ M F +GNDF+P++P L I GA+ LL V
Sbjct: 311 EYLEYEFRMPNPP----FQIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 366
Query: 389 YQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
Y++ P++ GY+ + +L R E F+ + S++ + F+++
Sbjct: 367 YKKEFPSMGGYLTDSCTPDLNRVEHFIQAVGSYEDKIFQKR 407
Score = 166 bits (419), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 109/192 (56%), Gaps = 11/192 (5%)
Query: 477 EVLNYANYEEYYYSDEDEEWRTNFFSE-FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIR 535
+V N N EE + WR ++ E FG + E+ RD A Y
Sbjct: 521 DVFNSENSEEDKVKLGEPGWRDRYYEEKFGARTPER----------MEEIRRDVALKYTE 570
Query: 536 AIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAA 595
+ W +HYYY G SW W+YP+HYAP+ SD+ S LN+ +E+G PF PF QL+ V PAA
Sbjct: 571 GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLTSLSQLNITFELGSPFKPFDQLMGVFPAA 630
Query: 596 SKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
S LP Y+ LMT NSPI+++YP +F D+NGK+ W+ + +PFI+E +L+ + V
Sbjct: 631 SAHALPLKYRQLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIEEDRLLAEIKKV 690
Query: 656 EHLLTDEERSRN 667
E LT EE RN
Sbjct: 691 EDTLTPEEARRN 702
Score = 114 bits (286), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 21/122 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREY--------QIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + V E ++P EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVRVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D T ++FQ +F YI+ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPS--PTTFAEVFQCMFDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FR 103
FR
Sbjct: 119 FR 120
>gi|297795249|ref|XP_002865509.1| hypothetical protein ARALYDRAFT_917497 [Arabidopsis lyrata subsp.
lyrata]
gi|297311344|gb|EFH41768.1| hypothetical protein ARALYDRAFT_917497 [Arabidopsis lyrata subsp.
lyrata]
Length = 1053
Score = 222 bits (565), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 207/370 (55%), Gaps = 59/370 (15%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK------ 179
FD+I F P+KL FMAIDGVAPRAKMNQQR RRFR+AK+A + ++
Sbjct: 83 FDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARRFRAAKDAAEAAAEEEQLREEFER 142
Query: 180 -GERLPTE---KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
G++LP + + FDSN ITPGT FM L LRY++ +++ +D WK++
Sbjct: 143 EGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYIHVRLNSDP---------GWKNIK 193
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR K+ P YNPN HCLYGLDADLIML L THE +FS+LR
Sbjct: 194 VILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIMLSLATHEIHFSILR 253
Query: 296 EEVKF--------------------NTKSNKGGSQIVTPEETKFFL------LHLSLMRD 329
E V F K + +++ E + +++ ++R+
Sbjct: 254 EVVFFPGEEDKCFLCGQVGHRAADCEGKMKRKAGEMLDDTEADVVVKKPYEFVNIWILRE 313
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YLE + ++ P S +++ +IDD++ + F +GNDF+P++P L I GA+ LL VY
Sbjct: 314 YLEHD---MQIPNQRSKK-NLDRLIDDFIFICFFVGNDFLPHMPTLEIREGAIELLMSVY 369
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFH 449
+ + Y+ + LNL+ E+F+ + +++ + F +K A +Q ++ S F
Sbjct: 370 KNKFRSAKKYLTDSSKLNLRNVERFIKAVGTYENQIF-QKRAQVQ-------QRQSGRFI 421
Query: 450 KEKSKEMDPD 459
++K++E D
Sbjct: 422 RDKAREKARD 431
Score = 160 bits (406), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 105/172 (61%), Gaps = 9/172 (5%)
Query: 496 WRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYY 555
WR ++ E + A+ + RD Y + W +HYYY+G SW+W+Y
Sbjct: 573 WRERYYEE---------KFTAKSAEEMELIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFY 623
Query: 556 PHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPI 615
P+HYAP+ SD+K L++K+E+G PF PF QLLAVLP+AS LP+ Y+ LMT SPI
Sbjct: 624 PYHYAPFASDLKGLDSLDIKFELGSPFKPFNQLLAVLPSASAHALPQCYRTLMTDPASPI 683
Query: 616 LEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
++Y +F D+NGK+ W+ + +PF+DE +L++A VE LT+EE RN
Sbjct: 684 ADFYAADFEIDMNGKRYSWQGISKLPFVDERRLLEAAALVEKSLTNEEIRRN 735
Score = 121 bits (304), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 78/123 (63%), Gaps = 22/123 (17%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE--------YQIP-----------EFDNLYLDMNGII 40
MGVP F+R++ +RYP + EV+ E IP E+DNLYLDMNGII
Sbjct: 1 MGVPSFYRWLIQRYPLIIQEVIEEEPLEVNGGVTIPIDTSKPNPNGYEYDNLYLDMNGII 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H C HP D TE +FQ +F YI+ LF M++P+KL FMAIDGVAPRAKMNQQR R
Sbjct: 61 HPCFHPEDKPSPTTFTE--VFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRAR 118
Query: 101 RFR 103
RFR
Sbjct: 119 RFR 121
>gi|413921159|gb|AFW61091.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
Length = 1058
Score = 222 bits (565), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 190/341 (55%), Gaps = 54/341 (15%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGER--- 182
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFR+AK+A + + E
Sbjct: 82 FDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLREEFER 141
Query: 183 ----LPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
LP +++ DSN ITPGT FM L L+Y++ ++ D WK +
Sbjct: 142 EGRRLPAKQQSQTCDSNVITPGTEFMAVLSVALQYYIHQRLNYDP---------GWKKIK 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ P +NPN RHCLYGLDADLIML L THE +FS+LR
Sbjct: 193 VILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLALATHEVHFSILR 252
Query: 296 E------------------------EVKFNTKS---NKGGSQIVTPEETKFFLLHLSLMR 328
E E K K+ ++ G IV + +F L++ +R
Sbjct: 253 EVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEYDEKGEAIVPKKPYQF--LNIWTLR 310
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
+YLE EF P F E I+DD++ M F +GNDF+P++P L I GA+ LL V
Sbjct: 311 EYLEYEFRMPNPP----FQIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 366
Query: 389 YQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
Y++ P++ GY+ + +L R E F+ + S++ + F+++
Sbjct: 367 YKKEFPSMGGYLTDSCTPDLNRVEHFIQAVGSYEDKIFQKR 407
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 109/192 (56%), Gaps = 11/192 (5%)
Query: 477 EVLNYANYEEYYYSDEDEEWRTNFFSE-FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIR 535
+V N N EE + WR ++ E FG + E+ RD A Y
Sbjct: 521 DVFNSENSEEDKVKLGEPGWRDRYYEEKFGARTPER----------MEEIRRDVALKYTE 570
Query: 536 AIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAA 595
+ W +HYYY G SW W+YP+HYAP+ SD+ S LN+ +E+G PF PF QL+ V PAA
Sbjct: 571 GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLTSLSQLNITFELGSPFKPFDQLMGVFPAA 630
Query: 596 SKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
S LP Y+ LMT NSPI+++YP +F D+NGK+ W+ + +PFI+E +L+ + V
Sbjct: 631 SAHALPLKYRQLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIEEDRLLAEIKKV 690
Query: 656 EHLLTDEERSRN 667
E LT EE RN
Sbjct: 691 EDTLTPEEARRN 702
Score = 114 bits (286), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 21/122 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREY--------QIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + V E ++P EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVRVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D T ++FQ +F YI+ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPS--PTTFAEVFQCMFDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FR 103
FR
Sbjct: 119 FR 120
>gi|429964640|gb|ELA46638.1| hypothetical protein VCUG_01864 [Vavraia culicis 'floridensis']
Length = 707
Score = 221 bits (564), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 203/737 (27%), Positives = 299/737 (40%), Gaps = 145/737 (19%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPE--FDNLYLDMNGIIHNCSHPNDNDPHFRITEK 58
MGVP FR+++++YP V E P D LY+D N IIH P+D + E
Sbjct: 32 MGVPSLFRWLTKKYP----QVIEKATPNNPTDVLYIDFNAIIHISCAPSDGPTP--VNED 85
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA--- 115
++ Q++ I+ + P+K+ ++ DGVAPRAK+NQQR RR+RS EA L +K+
Sbjct: 86 EMMQNVEKNIDSIVSKCLPRKMIVISTDGVAPRAKLNQQRSRRYRSIIEALELSKKSFES 145
Query: 116 ----------KEKGERLPT------EKRFDFITLKFCFPKKLFFMAIDGVAPRAK---MN 156
KEK ++L E + DF+ L +D K +
Sbjct: 146 TKSVNFVEKTKEKIQKLAKASTIKDEYKVDFVGL------------MDNSTSDEKNSGAD 193
Query: 157 QQRGRRFRSAKEAEVLEQKAKEKGE------------RLPTEKRFDSNCITPGTPFMCRL 204
+ GRR E E + E GE L ++ FD N ITPGT FM L
Sbjct: 194 EANGRRKERKCNEENAEPEDVEIGEYDKHASDLLEESSLTEDEAFDKNAITPGTRFMYDL 253
Query: 205 HQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDY 264
+++ F++ ++ D +K++C I S GEGE KIM IR MK
Sbjct: 254 EKRMDQFIRNRLVNDP---------KYKNLCFIYSNGRRAGEGEQKIMTLIRKMK----- 299
Query: 265 NPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF--------NTKSNKGGSQIVTPEE 316
N N++H +Y DADLI LG H ++RE+++F K K G +
Sbjct: 300 NRNLKHTIYSPDADLIFLGTSLHGRNVKIMREDLEFVHLQRQHYCEKCGKKGHLSTYCNK 359
Query: 317 TKFF---LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLP 373
F L +++ L E L + ++DDW+LM FL GNDF+P L
Sbjct: 360 LALFSCIFFDLIVLKRILSEELSMLVHTS-----YEFNRMVDDWILMSFLAGNDFLPTLQ 414
Query: 374 DLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADI 433
+ A+ +L K+ E N + +K++T DF R +
Sbjct: 415 CFDVRFEAIEILTKLLAE---------------NFNQTKKYITYKGEIDFSVLRNFF--- 456
Query: 434 QYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDED 493
K+ + D + +K K + T + E
Sbjct: 457 -----KILSQHEDSLYVKKKKLLA----------------DTRRRFQIKGFFE------- 488
Query: 494 EEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSW 553
N E KT YY KL K EV+ E YI + W YY G +W W
Sbjct: 489 -----NIPLETTYGKTRYYDTKLS-LKSEREVITVCRE-YILGLSWVFKYYVKGATNWEW 541
Query: 554 YYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENS 613
+YP+ YAP+ DI + + + EP QQ + V+P SK L+P+ E
Sbjct: 542 FYPYDYAPFACDIANVRSMPYLNKRTEPLDCLQQQMLVMPPQSKGLVPK--------EMH 593
Query: 614 PILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPML 673
PI +P E D+ K W+ V ++P ID L+ + L+ + L
Sbjct: 594 PIFNSFPTEIKIDMFDKLLPWQGVAILPIIDIETLLYQIKEKRSLIKYNDAILGIESRDL 653
Query: 674 VYTYSNVNLGTALAPDY 690
Y SN L L Y
Sbjct: 654 FYVGSNNKLFKCLKSLY 670
>gi|414876882|tpg|DAA54013.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea mays]
Length = 591
Score = 221 bits (563), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/342 (39%), Positives = 191/342 (55%), Gaps = 56/342 (16%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK------ 179
FD+I F P++L +MAIDGVAPRAKMNQQR RRFR+AK+A + +
Sbjct: 82 FDYIDRLFVMVRPRRLLYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLREEFER 141
Query: 180 -GERLPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
G +LP +++ DSN ITPGT FM L L+Y++ ++ D WK +
Sbjct: 142 EGRKLPPKQQSQTCDSNVITPGTEFMAVLSVALQYYIHRRLNYDP---------GWKQIK 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ +NPN RHCLYGLDADLIML L THE +FS+LR
Sbjct: 193 VILSDANVPGEGEHKIMSYIRGQRNLSGFNPNTRHCLYGLDADLIMLALATHEVHFSILR 252
Query: 296 E------------------------EVKFNTKSN----KGGSQIVTPEETKFFLLHLSLM 327
E E K K+ KGG+ + P++ F L++ +
Sbjct: 253 EVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGGA--IVPKKPYQF-LNIWTL 309
Query: 328 RDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYK 387
R+YLE EF P F E I+DD++ M F +GNDF+P++P L I GA+ LL
Sbjct: 310 REYLEYEFRMPNPP----FKIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMA 365
Query: 388 VYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
VY++ P++ GY+ + +L R E F+ + S++ + F+++
Sbjct: 366 VYKKEFPSMGGYLTDSCTPDLSRVEHFIQAVGSYEDKIFQKR 407
Score = 114 bits (284), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 78/122 (63%), Gaps = 21/122 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREY--------QIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + V E ++P EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKVPVDTSKPNPNSLEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D T ++FQ +F YI+ LF M++P++L +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPSP--TTFGEVFQCMFDYIDRLFVMVRPRRLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FR 103
FR
Sbjct: 119 FR 120
>gi|350289466|gb|EGZ70691.1| hypothetical protein NEUTE2DRAFT_92294 [Neurospora tetrasperma FGSC
2509]
Length = 531
Score = 220 bits (561), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 129/318 (40%), Positives = 178/318 (55%), Gaps = 77/318 (24%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ---------IP-----------EFDNLYLDMNGII 40
MG+P FR++S +YP + V E Q IP EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDQPITMPDGTVIPVDATKPNPNGEEFDNLYLDMNGIV 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H CSHP D P + E+++ ++F Y + + M++P+KL +A+DGVAPRAKMNQQR R
Sbjct: 61 HPCSHPEDR-PAPK-DEEEMMVEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+A+EA +E++ E + F+ L + +Q G
Sbjct: 119 RFRAAREA--MEKE----------EDKQKFVEL---------------------LKKQNG 145
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
+ +E E +E + +K FDSN ITPGTPFM L LRY+ K+ TD
Sbjct: 146 K----PQEEEPVE---------IVVKKAFDSNSITPGTPFMDILAASLRYWCSYKLNTDP 192
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W ++ VI+S PGEGEHKIM+++R + P+++PN RH +YGLDADLI
Sbjct: 193 ---------AWANIKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGLDADLI 243
Query: 281 MLGLCTHEPYFSLLREEV 298
MLGL THEP+F +LRE+V
Sbjct: 244 MLGLATHEPHFRVLREDV 261
>gi|336468281|gb|EGO56444.1| hypothetical protein NEUTE1DRAFT_130400 [Neurospora tetrasperma
FGSC 2508]
Length = 513
Score = 220 bits (561), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 129/318 (40%), Positives = 178/318 (55%), Gaps = 77/318 (24%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ---------IP-----------EFDNLYLDMNGII 40
MG+P FR++S +YP + V E Q IP EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDQPITMPDGTVIPVDATKPNPNGEEFDNLYLDMNGIV 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H CSHP D P + E+++ ++F Y + + M++P+KL +A+DGVAPRAKMNQQR R
Sbjct: 61 HPCSHPEDR-PAPK-DEEEMMVEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+A+EA +E++ E + F+ L + +Q G
Sbjct: 119 RFRAAREA--MEKE----------EDKQKFVEL---------------------LKKQNG 145
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
+ +E E +E + +K FDSN ITPGTPFM L LRY+ K+ TD
Sbjct: 146 K----PQEEEPVE---------IVVKKAFDSNSITPGTPFMDILAASLRYWCSYKLNTDP 192
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W ++ VI+S PGEGEHKIM+++R + P+++PN RH +YGLDADLI
Sbjct: 193 ---------AWANIKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGLDADLI 243
Query: 281 MLGLCTHEPYFSLLREEV 298
MLGL THEP+F +LRE+V
Sbjct: 244 MLGLATHEPHFRVLREDV 261
>gi|242080797|ref|XP_002445167.1| hypothetical protein SORBIDRAFT_07g005160 [Sorghum bicolor]
gi|241941517|gb|EES14662.1| hypothetical protein SORBIDRAFT_07g005160 [Sorghum bicolor]
Length = 945
Score = 220 bits (560), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 136/341 (39%), Positives = 190/341 (55%), Gaps = 54/341 (15%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGER--- 182
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFR+AK+A + + E
Sbjct: 82 FDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLREEFER 141
Query: 183 ----LPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
LP +++ DSN ITPGT FM L L+Y++ ++ D WK +
Sbjct: 142 EGRRLPAKQQSQTCDSNVITPGTEFMAVLSIALQYYIHQRLNYDP---------GWKKIK 192
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ P +NPN RHCLYGLDADLIML L THE +FS+LR
Sbjct: 193 VILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLALATHEVHFSILR 252
Query: 296 E------------------------EVKFNTKS---NKGGSQIVTPEETKFFLLHLSLMR 328
E E K K+ ++ G IV + +F L++ +R
Sbjct: 253 EVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEYDEKGEAIVPKKPYQF--LNIWTLR 310
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
+YLE EF P F E I+DD++ + F +GNDF+P++P L I GA+ LL V
Sbjct: 311 EYLEYEFRMPNPP----FQIDFERIVDDFIFICFFVGNDFLPHMPTLEIREGAINLLMAV 366
Query: 389 YQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
Y++ P++ GY+ + +L R E F+ + S++ + F+++
Sbjct: 367 YKKEFPSMGGYLTDSCTPDLNRVEHFIQAVGSYEDKIFQKR 407
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 118/213 (55%), Gaps = 11/213 (5%)
Query: 464 IKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSE-FGQHKTDYYHYKLDYAKVT 522
+K+ D G +V N N EE + WR ++ + FG +
Sbjct: 508 LKSMLKDALRGKSDVFNSENPEEDKVKLGEPGWRDRYYEDKFGARTPER----------M 557
Query: 523 NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPF 582
E+ RD A Y + W +HYYY G SW W+YP+HYAP+ SD++ S LN+ +E+G PF
Sbjct: 558 EEIRRDVALKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLRSLSQLNITFELGLPF 617
Query: 583 LPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPF 642
PF QL+ V PAAS LP Y+ LMT NSPI+++YP +F D+NGK+ W+ + +PF
Sbjct: 618 KPFDQLMGVFPAASAHALPLKYRQLMTDPNSPIVDFYPTDFEVDMNGKRFSWQGIAKLPF 677
Query: 643 IDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
IDE +L+ + VEH LT E + P+L +
Sbjct: 678 IDEDRLLAEIKKVEHTLTSVEAGDLKPPPVLWH 710
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 78/122 (63%), Gaps = 21/122 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREY--------QIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + V E ++P EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVRVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D T ++F+ +F YI+ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPS--PTTFAEVFKCMFDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FR 103
FR
Sbjct: 119 FR 120
>gi|367035618|ref|XP_003667091.1| hypothetical protein MYCTH_109078 [Myceliophthora thermophila ATCC
42464]
gi|347014364|gb|AEO61846.1| hypothetical protein MYCTH_109078 [Myceliophthora thermophila ATCC
42464]
Length = 561
Score = 219 bits (559), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/320 (39%), Positives = 177/320 (55%), Gaps = 76/320 (23%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQI-------------------PEFDNLYLDMNGII 40
MG+P FR++S +YP +S V+ E + EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSAKYPKIISPVIEEKPLVLEDGTVVPVDTTQPNPNGEEFDNLYLDMNGIV 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H CSHP D P R E+++ ++F Y + + M++P+K+ +A+DGVAPRAKMNQQR R
Sbjct: 61 HPCSHPEDK-PAPR-DEEEMMIEVFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFR+A++A K KE+G+ ++L M + ++ G
Sbjct: 119 RFRAAQDA-----KEKEEGK------------------QQLLKM----------LKKENG 145
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
+ E + +KA FDSN ITPGTPFM L LRY+ K+ TD
Sbjct: 146 SDATKEESVEAVVKKA------------FDSNSITPGTPFMDILAASLRYWCAYKLNTDP 193
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
W + VI+S PGEGEHKIM+++R ++ P+++PN RH +YGLDADLI
Sbjct: 194 ---------AWAKLKVIISDATVPGEGEHKIMEFVRSQRNSPEHDPNTRHVIYGLDADLI 244
Query: 281 MLGLCTHEPYFSLLREEVKF 300
MLGL THEP+F +LRE+V F
Sbjct: 245 MLGLATHEPHFRVLREDVFF 264
>gi|302697115|ref|XP_003038236.1| hypothetical protein SCHCODRAFT_255205 [Schizophyllum commune H4-8]
gi|300111933|gb|EFJ03334.1| hypothetical protein SCHCODRAFT_255205 [Schizophyllum commune H4-8]
Length = 1480
Score = 219 bits (558), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/319 (40%), Positives = 171/319 (53%), Gaps = 80/319 (25%)
Query: 2 GVPKFFRYISERYPCLSEVVREYQ--------IP-----------EFDNLYLDMNGIIHN 42
GVP FR++S++YP + + V E + IP EFDNLYLDMNGI+H
Sbjct: 10 GVPALFRWLSKKYPKIVQPVIEEEPRQIGDEVIPIDASGRNPNGVEFDNLYLDMNGIVHP 69
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
C+HP + P TE+++ +IF+Y E + M++P+KL FMAIDGVAPRAKMNQQR RRF
Sbjct: 70 CTHP-EGKPAPE-TEEEMMVEIFNYTERVVNMVRPRKLLFMAIDGVAPRAKMNQQRSRRF 127
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
R+++EA ++K + E L K M ++
Sbjct: 128 RASQEA---QEKEDARAESLELWK---------------------------SMGKELTDE 157
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
++ K A +DSN ITPGTPFM L LRY+ K+ D
Sbjct: 158 MKNPKAA-------------------WDSNAITPGTPFMTLLANSLRYWTVQKMNEDP-- 196
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK + VI+S PGEGEHKIMD+IR + P ++PN H +YGLDADLIML
Sbjct: 197 -------AWKGIQVIISDASVPGEGEHKIMDFIRRQRVNPGHDPNTEHVIYGLDADLIML 249
Query: 283 GLCTHEPYFSLLREEVKFN 301
L THEP+F +LRE+V FN
Sbjct: 250 SLATHEPHFRVLREDV-FN 267
>gi|123507009|ref|XP_001329319.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121912273|gb|EAY17096.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1017
Score = 219 bits (557), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 261/1110 (23%), Positives = 449/1110 (40%), Gaps = 213/1110 (19%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+ L F+A+DG AP AK QQR RRF +A++ E + F + I+ G
Sbjct: 75 PESLLFIAVDGPAPLAKCAQQRSRRFVAARDHE---------------DGTFSTAAISVG 119
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM LH+ L F+ +I D +W VI S H TPGEGE+K +Y+R
Sbjct: 120 TEFMEELHEHLLKFINSRIENDPIWSQPK---------VIYSSHRTPGEGENKFFNYMRE 170
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF---NTKSNKGGSQIVTP 314
+++ HC+Y DADL+ L L T L+RE + N G +
Sbjct: 171 HMFTEEHDEFATHCIYSPDADLVFLALQTGLKNIYLMREWGSWMGPNEDVANGEIDKLRV 230
Query: 315 EETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPD 374
F LLHL L+RDY + EF + P +I+D+V + FLIGNDFIP+ P+
Sbjct: 231 SPGDFELLHLPLLRDYFQKEFPESDLP----------RLINDFVAISFLIGNDFIPHFPE 280
Query: 375 LHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQ 434
+ I NG + Y+ L L R + +T+ ++D E +
Sbjct: 281 IDIHNGDFDNILTAYRLSL--------------LDRKKYLITEEITYDKENL------LA 320
Query: 435 YLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDE 494
+L+ + S K P K+T+ +G Y S
Sbjct: 321 FLKAVVANVRSKARPSGK-----PAKTKHAKSTELHTKEGA---------RSYLKSKYKS 366
Query: 495 EWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWY 554
+ F E D +++ L Y Y+ GC ++W
Sbjct: 367 GFNKEFEEELCHSVIDSFNWVLKY-------------------------YFEGCPDYTWQ 401
Query: 555 YPHHYAPYISDIKDFS-HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENS 613
+ + Y P + + ++ +E G P LPF+QLL++LP LLP P +LM S
Sbjct: 402 FHYFYPPPLVLVAEYVLDYEPNFEQGRPPLPFEQLLSILPPKMSYLLPYPIASLM-FSPS 460
Query: 614 PILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPML 673
P+ EYYP++F DLNG+K ++E V LIPF+D K+ V L+ +E+ RN +
Sbjct: 461 PLAEYYPDKFEIDLNGRKYEYEGVTLIPFVDMEKIRTETSRVFGALSPKEKKRNEFDELK 520
Query: 674 VYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHF 733
+ ++P K + L +D
Sbjct: 521 I------------------------------------MNPGKPQTKLTKD------PPGL 538
Query: 734 PTLKHV-QFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLK-----QVADQILGKTIF 787
PTL + Q+ ++ + ++ +F +PSR S+ IV D +V + + A Q++GK +
Sbjct: 539 PTLNGIFQYDYENSSNELAIFGKPSRYPSMFIVPDFEEVGENEKYKDLETAKQLIGKIVL 598
Query: 788 INYPHLIEIRVQAV-ATKDSRISFDKNSGPVFE-RAAKDMQDAFQLSKKSITDGYYTKLG 845
N+P LI +V KD + ++ G + AK M++ K++ G
Sbjct: 599 CNWPTLIPGKVMGCFNNKDCFVVDSRSPGNLLTCGGAKKMENLISNLKRT--------KG 650
Query: 846 VDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYK 905
+D V + QP + + + I+S + + + ++ Y
Sbjct: 651 LDCEKCTVGLIVQPYAIK----------SINGSVIKSDEEFLFPAELIVTDTVETMKRYL 700
Query: 906 TIDEIFYP--GCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDD 963
T + P G + + G V S V + +I + D S L++D
Sbjct: 701 TPEPPKLPEVGSRVIIIEGADQGKVAKVTS-VDQGTGYITAKLILSTPFDGS---FLRND 756
Query: 964 TVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGF 1023
+ L +A+ L + P ++S ++ +++ + + ++ L + + + +
Sbjct: 757 SY--PLSINELATDLELKPEVVSCMLSTVKVLN-FQGDVRVPDVALTLSYRDLVMDGIAQ 813
Query: 1024 TRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKD---HSSDDIYLRDDVF-------P 1073
+RD + Y+ V+ + K Y++ + K +S+ + +F P
Sbjct: 814 KQRDGSI---MYSRSVLNICKEYLENTGLADFYSKKAKIQTSEKGRPKLTIFGDTLAGKP 870
Query: 1074 HQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKV-------VSLIEHAVDTCEKVEKQ 1126
+ ++ +I +W+ H ++EV G ++D + +++E +D + E +
Sbjct: 871 EKAPAKIEEIQNWI----HNQSEV--AGLFLIDTSISIVTRTSSTMLEVRLDKLKFEETE 924
Query: 1127 ITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI-VQGET 1185
+ K +I + P +K + DRV +I VP G GT+IG Q
Sbjct: 925 GSEVTLNPKQFIVRGGY----PASRSKISIGDRVTSIAPNGPVPFGTHGTVIGFNYQTHD 980
Query: 1186 SYDAMYDVVFDKPFPHG--VKIRCSESRGY 1213
Y VV D PF G +++R + RG+
Sbjct: 981 VY-----VVADTPFDLGSTLRMRLNSQRGF 1005
Score = 84.0 bits (206), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGV F+R++ +RYP + + P +N Y+D N II+N P +
Sbjct: 1 MGVAGFYRWLVQRYPLIRQRANRLSYPRINNFYIDFNCIIYNSIRLVK--PSLDGDNTVL 58
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAE 109
F +I Y+++L + I+P+ L F+A+DG AP AK QQR RRF +A++ E
Sbjct: 59 FNEICRYVDLLVQTIKPESLLFIAVDGPAPLAKCAQQRSRRFVAARDHE 107
>gi|440492471|gb|ELQ75035.1| 5'-3' exonuclease HKE1/RAT1 [Trachipleistophora hominis]
Length = 606
Score = 219 bits (557), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 190/686 (27%), Positives = 291/686 (42%), Gaps = 140/686 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPE--FDNLYLDMNGIIHNCSHPNDNDPHFRITEK 58
MGVP FR+++++YP + E P+ D LY+D N IIH P+D + E
Sbjct: 1 MGVPSLFRWLTKKYP----QIIEKATPKNPTDILYIDFNAIIHISCTPSDGPTP--VNED 54
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA--- 115
++ +I I+ + P+K+ ++ DGVAPRAK+NQQR RR+RS EA L +K+
Sbjct: 55 EMMNNIEKNIDSIVSKCLPRKMIVISTDGVAPRAKLNQQRARRYRSIIEALELSKKSFEN 114
Query: 116 ----------KEKGERL---PT---EKRFDFITLKFCFPKKLFFMAIDGVAPRAK---MN 156
KEK ++L PT E + DF+ L ++ K ++
Sbjct: 115 TKGANFVEKTKEKIQKLAKTPTIKDEYKVDFVGL------------MENSTSDEKTGVVD 162
Query: 157 QQRGRRFRSAKEAEVLEQKAKEKG-------ERLPTEKRFDSNCITPGTPFMCRLHQQLR 209
+ + E E +E EK L ++ FD N ITPGT FM L +++
Sbjct: 163 ETNNEKKEEDNELEDVEIDGFEKHPSDLLEESSLTEDEAFDKNAITPGTRFMYDLEKRMD 222
Query: 210 YFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMR 269
F++ ++ + ++K+ +C I S GEGE KIM IR MK N N++
Sbjct: 223 KFIRERLANNPMYKN---------LCFIYSNGRRAGEGEQKIMTLIRKMK-----NRNLK 268
Query: 270 HCLYGLDADLIMLGLCTHEPYFSLLREEVKF--------NTKSNKGGSQIVTPEETKFF- 320
H +Y DADLI LG H ++RE+++F K K G + F
Sbjct: 269 HTIYSPDADLIFLGTSLHGRNVKIMREDLEFVYLQRQHFCEKCGKKGHLSTYCNKLALFS 328
Query: 321 --LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
L +++ L E L ++ + + DDW+LM FL GNDF+P L +
Sbjct: 329 CIFFDLIVLKRILSEELSML-----ITTSYEFNRMADDWILMSFLAGNDFLPTLQCFDVR 383
Query: 379 NGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEG 438
A+ +L K+ E YI G ++ + F LA Y D Y++
Sbjct: 384 FEAIEILTKLLAENFNRTKKYITYKGEIDFAVLKNFFRILAH---------YEDHLYIKK 434
Query: 439 KMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRT 498
K K +D + + K +++
Sbjct: 435 K--KLLTDTRRRFQIKGFFENISL------------------------------------ 456
Query: 499 NFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHH 558
E KT YY KL + K EV+ E YI + W YY G +W W+YP+
Sbjct: 457 ----ETTYGKTRYYDTKL-HLKSEREVITVCRE-YILGLSWVFKYYVKGATNWEWFYPYD 510
Query: 559 YAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEY 618
YAP+ DI + + + EP QQ + V+P SK L+P+ E PI +
Sbjct: 511 YAPFACDIANVRSMPYLNKRTEPLDCLQQQMLVMPPQSKGLVPK--------EMHPIFDS 562
Query: 619 YPEEFATDLNGKKQDWEAVVLIPFID 644
+P E D+ K W+ V ++P ID
Sbjct: 563 FPTEIKIDMFDKLLPWQGVAILPIID 588
>gi|355563402|gb|EHH19964.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
Length = 926
Score = 218 bits (554), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 153/469 (32%), Positives = 219/469 (46%), Gaps = 120/469 (25%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S +YP + E + E + + + ++ S PN ND F +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDA-----SKPNPNDVEF----DNL 51
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ D+ I+ P E K K E
Sbjct: 52 YLDMNG---IIHPCTHP----------------------------------EDKPAPKNE 74
Query: 121 RLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQK 175
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++KE A V +Q+
Sbjct: 75 DEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQR 134
Query: 176 AKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK+
Sbjct: 135 VREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKN---- 190
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
+ ++P+++PN HCL G DADLIMLGL THE
Sbjct: 191 -----------------------------LTAQPNHDPNTHHCLCGADADLIMLGLATHE 221
Query: 289 PYFSLLREEVKFNTK-----SNKGGSQIVTPE--------------------ETKFFLLH 323
P F+++REE K N N+ G ++ E E +F L
Sbjct: 222 PNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLR 281
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L I A+
Sbjct: 282 LNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAID 337
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 338 RLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 386
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 493 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 552
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 553 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 612
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 613 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 662
>gi|328850703|gb|EGF99864.1| hypothetical protein MELLADRAFT_68240 [Melampsora larici-populina
98AG31]
Length = 406
Score = 217 bits (553), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 168/325 (51%), Gaps = 78/325 (24%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE-----------YQIPEFD-------NLYLDMNGIIHN 42
MGVP FR++S++YP + E V E Y+ D + DMNGI+H
Sbjct: 1 MGVPALFRWLSKKYPKIVEQVIEDVPIRTEVEGGYEETPLDMSKRNPNGVEFDMNGIVHP 60
Query: 43 CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
C+HP P TE+++ ++F Y E + M++P+KL +AIDGVAPRAKMNQQR RRF
Sbjct: 61 CTHPEGKKPPE--TEEEMMIEVFKYTERVVNMVRPRKLLMIAIDGVAPRAKMNQQRSRRF 118
Query: 103 RSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
R+A+EA+ E+ E T M ++
Sbjct: 119 RAAQEAQTKEEAKLAAIEEWKT------------------------------MGKELSEE 148
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
F+S K+A +DSN ITPGTPFM L + LRY++ K+ TD
Sbjct: 149 FKSDKKA-------------------WDSNAITPGTPFMTLLTESLRYWIVHKMNTDP-- 187
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WK + VILS PGEGEHKIMD+IR ++ Y+PN H +YGLDADLIML
Sbjct: 188 -------GWKQIQVILSDASVPGEGEHKIMDFIRRQRTHSSYDPNTSHVIYGLDADLIML 240
Query: 283 GLCTHEPYFSLLREEVKFNTKSNKG 307
L THEP+F +LRE+V + K +G
Sbjct: 241 SLATHEPHFKVLREDVFADQKKGRG 265
>gi|298204908|emb|CBI34215.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 216 bits (550), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/331 (40%), Positives = 191/331 (57%), Gaps = 42/331 (12%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEV-------LEQKAKE 178
FD+I F P++L +MAIDGVAPRAKMNQQR RRFR+AK+A L ++ +
Sbjct: 79 FDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFRAAKDAAEAEAEEERLRKEFEV 138
Query: 179 KGERL-PTEK--RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
+G+ L P EK DSN ITPGT FM L L+Y++ ++ + W T
Sbjct: 139 EGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIHSRLNRNPGWCSTK--------- 189
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM YIR ++ +NPN RHCLYGLDADLIML L THE +FS+LR
Sbjct: 190 VILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLYGLDADLIMLSLATHEVHFSILR 249
Query: 296 EEVKFNTKSNKG--------------GSQIV--TP-EETKFFLLHLSLMRDYLELEFGKL 338
E + + K G ++V TP + K+ L++ ++R+YL+ + L
Sbjct: 250 EMITPPGQQEKCYLCGQVGHLAAECRGIEVVDDTPIHKKKYQFLNIWVLREYLQYDLEIL 309
Query: 339 KEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDG 398
P F + E ++DD+V + F +GNDF+P++P L I GA+ LL VY+ + G
Sbjct: 310 NPP----FEINFERLLDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFSAMGG 365
Query: 399 YINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
Y+ + G + L R E F+ +A ++ + F+++
Sbjct: 366 YLTDAGEVLLDRVEHFIESVAVYEDQIFQKR 396
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 109/182 (59%), Gaps = 2/182 (1%)
Query: 507 HKTDYY--HYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYIS 564
+K YY + L + ++V ++ Y+ + W YYY G SW WYYP HYAP+ S
Sbjct: 678 YKERYYTEKFNLSNPEEIDKVRKEIVMKYVEGLCWVCRYYYQGVCSWQWYYPFHYAPFAS 737
Query: 565 DIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFA 624
D+KD L + + +GEPF PF QL+ LPAAS LPE Y+ LMT ++SPIL++YP +F
Sbjct: 738 DLKDLVDLEITFFLGEPFKPFDQLMGTLPAASASSLPENYRKLMTDQSSPILDFYPSDFE 797
Query: 625 TDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGT 684
D+NGK+ W+ V +PFIDE KL+ +E LT EE+ RN L+Y ++ L T
Sbjct: 798 IDMNGKRYAWQGVAKLPFIDEEKLLAETKKLEVTLTVEEQVRNSVMFDLLYVHAVHPLAT 857
Query: 685 AL 686
+
Sbjct: 858 QI 859
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 78/119 (65%), Gaps = 18/119 (15%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE----------YQIP-----EFDNLYLDMNGIIHNCS 44
MGVP F+R++++RYP + +VV E P EFDNLYLDMNGIIH C
Sbjct: 1 MGVPAFYRWLADRYPLAVMDVVEEEPSEGGAEIDVSRPNPNGMEFDNLYLDMNGIIHPCF 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFR 103
HP D P T +F+ IF YI+ LF +++P++L +MAIDGVAPRAKMNQQR RRFR
Sbjct: 61 HP-DGKPA-PTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 117
>gi|312089591|ref|XP_003146304.1| hypothetical protein LOAG_10732 [Loa loa]
Length = 686
Score = 216 bits (549), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 160/455 (35%), Positives = 230/455 (50%), Gaps = 101/455 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNG--IIHNCSHPNDNDPHFRITE 57
MGVP FFR+++ +YP + + V E DMNG I N PN N
Sbjct: 1 MGVPAFFRWLTRKYPSVIVDAVEEKP--------RDMNGVRIPVNTVDPNPN-------- 44
Query: 58 KQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 117
FQ+ + ++ ++G+ + R S K E + E
Sbjct: 45 ---FQEFDN--------------LYLDMNGIIHPCTHPEDRP----SPKTEEEMFTLIFE 83
Query: 118 KGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-EVLEQKA 176
+RL F ++ P+KL +MAIDGVAPRAKMNQQR RRFR++KEA E +EQ A
Sbjct: 84 YIDRL-------FAIVR---PRKLLYMAIDGVAPRAKMNQQRSRRFRASKEAIEKVEQIA 133
Query: 177 KEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCV 236
+ + RL +E G P L LRY+V ++ +D W+ V V
Sbjct: 134 ETRS-RLESE----------GYP----LAVALRYYVHQRLNSDP---------GWEKVAV 169
Query: 237 ILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLRE 296
ILS PGEGEHKIMD+IR ++ P ++PN HCL G DADLIMLGL THEP F+++RE
Sbjct: 170 ILSDANVPGEGEHKIMDFIRRQRASPSHDPNTVHCLCGADADLIMLGLATHEPNFNIIRE 229
Query: 297 EVKFNTK-----SNKGGSQI---------------VTP--EETKFFLLHLSLMRDYLELE 334
E N + + G + +P +ET F + L ++R+YLE E
Sbjct: 230 EFMPNQQRPCDLCGQYGHDLNDCKGLALDDDSECQSSPLQKETNFIFVRLPVLREYLERE 289
Query: 335 FGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLP 394
L P S PF +E IDDWV M F +GNDF+P+LP L I A+ L K+Y++++
Sbjct: 290 ---LHIPNS-SIPFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVKLYKDMVY 345
Query: 395 TLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
+ G++ + G ++++R + L KL + E F+ +
Sbjct: 346 EMKGHLTDSGVVHIERAQIILNKLGEVEDEIFKSR 380
Score = 153 bits (387), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 101/183 (55%), Gaps = 2/183 (1%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCV 549
S EDE + E G K YY K R A Y+ + W LHYYY GC
Sbjct: 469 SSEDEVFDEVRLWEDGW-KDRYYKSKFQVDGKDIVFRRKVALAYVEGLCWVLHYYYQGCA 527
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYE-MGEPFLPFQQLLAVLPAASKELLPEPYQNLM 608
SW WYYP HYAP+ SD S + EPF P QQL++V PAAS+ LPE +Q LM
Sbjct: 528 SWDWYYPFHYAPFASDFDAVSQFKPDFSACTEPFKPLQQLMSVFPAASRVHLPEAWQELM 587
Query: 609 TLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
SPI+++YP+ F DLNGKK W+ V L+PF+DE +L++ + +E L E+ RN
Sbjct: 588 ISPTSPIIDFYPDNFVIDLNGKKCAWQGVALLPFVDEKRLLEVLKPMEDKLDAFEKERNS 647
Query: 669 HGP 671
GP
Sbjct: 648 RGP 650
>gi|403221749|dbj|BAM39881.1| 5'-3' exoribonuclease 2 [Theileria orientalis strain Shintoku]
Length = 1374
Score = 215 bits (548), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 183/717 (25%), Positives = 310/717 (43%), Gaps = 171/717 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+P FFR+++ERYP + E +Y + + D + +
Sbjct: 1 MGIPSFFRWLAERYPLICE--SQY------------------VTTSDKGDAFKLLKSPET 40
Query: 61 FQDIFHYIEILFRMIQPKKL--FFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
F+D F+ E LF P ++ ++G+ S A++ + E
Sbjct: 41 FKDSFN--EPLFTYRPPDGFDNLYLDVNGIVHNC-----------SHSIADLCQNITSED 87
Query: 119 GERLPTEKRFDFITLKFCF--------PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA- 169
F+++ C PK L ++A+DGVAPRAK+ QQR RRFRSA EA
Sbjct: 88 DI---------FVSIFQCIINLVNIVRPKSLLYLAVDGVAPRAKIIQQRERRFRSASEAT 138
Query: 170 ----------EVLEQKAKEKGERLPTEK-RFDSNCITPGTPFMCRLHQQLRYFVKLKITT 218
E+ +Q +GE E+ +FD ITPGT FM RL +L++F I
Sbjct: 139 IQQLILESLTELGDQDEDTQGEETQKEEFKFDPIQITPGTAFMERLTTRLQFFALKMINE 198
Query: 219 DKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSK-------------PDYN 265
++LW++ + +++SG E PGEGEHKIM+YIR K++ P
Sbjct: 199 NELWRN---------LKIVVSGSEVPGEGEHKIMEYIRNDKARRHAEFESEVHRREPGDT 249
Query: 266 PNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLS 325
P++ HC+YGLDADLI+L L THEPY LLRE+V F N +++
Sbjct: 250 PHISHCVYGLDADLIVLSLATHEPYICLLREQVVFGHMKNSSKLRMMVN----------- 298
Query: 326 LMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLL 385
M Y+ ++ ++DD+V + F +GNDF+P+L +I G L L
Sbjct: 299 -MNSYI------------------MDRVVDDFVFLTFFVGNDFLPHLLLANIPEGGLNEL 339
Query: 386 YKVY--------------------QEVLP---TLDGYIN-EGGYLNLKRFEKFLTKLASF 421
++Y Q LP D ++ G +N F TK A +
Sbjct: 340 LQIYREYLDESFKSGPSSTAVGNHQNTLPQRNARDPWLTCNCGEVNFDNLMIFFTKWAKY 399
Query: 422 DFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNY 481
E + YL +++ + SK + + ++ + + + + V+++
Sbjct: 400 ------ENFKIQNYLT-------NEIVSRTSSKNQNTNNNKVV-SFNSNRVVMSHSVVDH 445
Query: 482 ANYEEYYYSDEDEEWR-----TNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRA 536
+ + + + + ++F S++ T YK Y + +C + +
Sbjct: 446 SKHSSLITVIDVKNCKIETDLSDFISKYPNEPTTLLDYKNRYYLAKMGISNQLIKCDMSS 505
Query: 537 IQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAAS 596
+ + NG + P +S + L++K++ G+P P++QL+ VLP S
Sbjct: 506 VNSRRYVLENGRIVV-------LTPLLSQV-----LDIKFDKGKPITPYEQLMLVLPRQS 553
Query: 597 KELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMD 653
LP + L+T + SP+ +YYP F D++ K W + L+P + +++ M+
Sbjct: 554 AHFLPSVFSALITEQESPLHQYYPIHFDVDMDNTKVPWGGITLLPSVPYSLMLQCMN 610
Score = 44.3 bits (103), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 20/176 (11%)
Query: 1035 YTEQVVTLIKNYMKQFPEVFGFLK----DHSSDDIYLRDDVFPHQGEQ----RVAQIVSW 1086
Y+ V LI NY +FPE+F FL+ +H + + + +++PH E+ ++ +I +
Sbjct: 1116 YSGDCVELINNYRDKFPELFEFLERVDVNHENRPLEMT-EIYPHLSEEQARFKLGRINKF 1174
Query: 1087 LKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQ----------ITLFVKPNKL 1136
QP + ++ + + ++ + C +V K+ + L
Sbjct: 1175 CDSQPFRRLKLTQGNYTCMTKNQIQIVVDYQNECSRVAKEAGAEGEKDVKMVRVSHMRNL 1234
Query: 1137 YIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYD 1192
+IP + D F L VV I VP+G RG ++GI ++S + D
Sbjct: 1235 HIPAYNTKAIRYDLANVF-LGQVVVYISHNEKVPIGSRGVVVGIYPNDSSSEGEAD 1289
>gi|218185281|gb|EEC67708.1| hypothetical protein OsI_35184 [Oryza sativa Indica Group]
Length = 944
Score = 215 bits (547), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 211/462 (45%), Gaps = 130/462 (28%)
Query: 1 MGVPKFFRYISERYPCL------------SEVVREYQIPEFDNLYLDMNGIIHNCSHPND 48
MGVP F+R++ +YP + S P + NLYLDMNGIIH C HP D
Sbjct: 1 MGVPSFYRWLVGKYPAIVSPANDDDDDVGSSSNGAAAPPVYHNLYLDMNGIIHPCFHPQD 60
Query: 49 N---DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS- 104
T +++F +F Y++ L R+++P L ++A+DGVAPRAKMNQQR RRF+S
Sbjct: 61 QVCPPSPVPTTLEEVFHSMFDYMDRLIRIVRPTSLLYLAVDGVAPRAKMNQQRARRFKSA 120
Query: 105 --AKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRR 162
AK+AEV E ++ R
Sbjct: 121 MPAKQAEVEENILRD--------------------------------------------R 136
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
FR A+ +VL Q+ E D N ITPGT FM +L L+Y+++ + D L
Sbjct: 137 FR-AEGKKVLPQETSSSSE------VSDPNVITPGTEFMDKLSDALKYYIRAHLNNDPL- 188
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
WKD+ VILS PGEGEHKIM +IR + + Y+PN RHCLYGLDADLIML
Sbjct: 189 --------WKDINVILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHCLYGLDADLIML 240
Query: 283 GLCTHEPYFSLLREEVKFNTKSNKGGSQIVTP-----EETKFFLLHLSLMRDYLELEFGK 337
L +HE +FS+LREEV ++N+ + +TP +E + F R GK
Sbjct: 241 ALASHEVHFSILREEVLH--QNNQENTIPITPKTFTSQEAEKFKCRAWFPRITEARPEGK 298
Query: 338 L-KEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTL 396
L K+P GA+ LL +VY+ +
Sbjct: 299 LTKKP------------------------------------YQGAIDLLIEVYKTSFNKM 322
Query: 397 DGYI--------NEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
GYI YL + R EKF KL+ ++ + F + Y
Sbjct: 323 GGYIVDTDKVKDKHAAYLKVSRLEKFFHKLSLYEEKIFLKCY 364
Score = 85.5 bits (210), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 34/172 (19%)
Query: 496 WRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYY 555
W++ FF E +T K + AK+ NE+++ Y+ + W L YY+ SWSWYY
Sbjct: 527 WKSRFFKEKFDAET-----KDEIAKLQNEMVQK----YLEGLCWVLCYYFADVPSWSWYY 577
Query: 556 PHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPI 615
P +YAP+ SD++ S LP Y LM + S I
Sbjct: 578 PFYYAPFASDVRGLSR-------------------------SFALPGCYSKLMDCDESAI 612
Query: 616 LEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
+YP E D +GK+ W+ + +PFI++ L+ E L E RN
Sbjct: 613 QAFYPSELDIDTDGKRYLWQGIAKLPFIEDKLLLSVTKTAEKDLAVHELRRN 664
>gi|307136058|gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo]
Length = 934
Score = 214 bits (546), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 151/441 (34%), Positives = 220/441 (49%), Gaps = 96/441 (21%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MGVP F+R++++RYP +++VV E + + + L ++ S PN N F
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPLDGPNGVLLPID-----VSKPNPNGMEF----DN 51
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
++ D+ I F +G P A + F+S
Sbjct: 52 LYLDMNGIIHPCFHP-----------EGKPPPATYDAV----FKSI-------------- 82
Query: 120 ERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEV------ 171
FD+I F P+K+ +MAIDGVAPRAKMNQQR RRFR+AK+A
Sbjct: 83 --------FDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRFRAAKDAAEAEAEEE 134
Query: 172 -LEQKAKEKGERL-PTEK--RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
L ++ + +G+ L P EK DSN ITPGT FM L L+Y+ + ++ + W+ T
Sbjct: 135 RLRKEFEAEGQTLLPKEKPETCDSNVITPGTEFMGVLSVALQYYAQSRLNHNPGWRFTK- 193
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
VILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLIML L TH
Sbjct: 194 --------VILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATH 245
Query: 288 EPYFSLLREEVKFNTKSNK------------------------GGSQIVTPEETKFFLLH 323
E +FS+LRE + + K G+ + K+ L+
Sbjct: 246 EVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLN 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
+ ++R+YL+ E P F + E I+DD+V + F +GNDF+P++P L I GA+
Sbjct: 306 IWVLREYLQYELDIPNPP----FEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAIN 361
Query: 384 LLYKVYQEVLPTLDGYINEGG 404
LL +Y++ P + GY+ + G
Sbjct: 362 LLMHIYRKEFPAIGGYLTDAG 382
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 111/173 (64%), Gaps = 3/173 (1%)
Query: 507 HKTDYYHYKLDYAKVTN--EVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYIS 564
+K YY K + A N E+ +D Y+ + W YYY+G SW WYYP+HY+P+ S
Sbjct: 418 YKERYYAEKFN-ANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFAS 476
Query: 565 DIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFA 624
D+K+ + L + + +GEPF PF QL+ LPAAS LPE Y+NLMT +SPILE+YP +F
Sbjct: 477 DLKNLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDPSSPILEFYPSDFE 536
Query: 625 TDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
D+NGK+ W+ V +PFIDE KL+ +E LTDEE++RN L+YT+
Sbjct: 537 IDMNGKRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSIMLDLLYTH 589
>gi|409080083|gb|EKM80444.1| hypothetical protein AGABI1DRAFT_113625, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 315
Score = 214 bits (544), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 183/377 (48%), Gaps = 106/377 (28%)
Query: 1 MGVPKFFRYISERYPCL---SEVVREYQIP---------------------EFDNLYLDM 36
MGVP FR++S++YP + E E +IP EFDNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIIYPVEEEEESKIPDDNGDEVTVPVNMLLPNPNGVEFDNLYLDM 60
Query: 37 NGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQ 96
NGI+H C+HP E + F Y + + MI+P+KL FMAIDGVAPRAKMNQ
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEV--FKYTDRVVNMIRPRKLLFMAIDGVAPRAKMNQ 118
Query: 97 QRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMN 156
QR RRFRS+ +A K KE
Sbjct: 119 QRSRRFRSSHDA-----KEKEDA------------------------------------- 136
Query: 157 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKI 216
+Q + A E+ E++ KE +DSN ITPGTPFM L LRY+V K+
Sbjct: 137 RQESLKIWKAMGKEITEEEHKEA---------WDSNAITPGTPFMDLLATSLRYWVVQKM 187
Query: 217 TTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLD 276
TD WK++ V++S PGEGEHKIMD+IR +S P ++PN +H +YGLD
Sbjct: 188 NTDP---------AWKNIQVLISDAGVPGEGEHKIMDFIRRQRSNPGHDPNTQHVIYGLD 238
Query: 277 ADLIMLGLCTHEPYFSLLREEVKFN--------------------TKSNKGGSQIVTPEE 316
ADLIML L THEP F +LRE+V N T + + P++
Sbjct: 239 ADLIMLALATHEPNFRVLREDVFANDTKPTACRMCGQEGHYAAQCTGTKAEIEKKTPPDK 298
Query: 317 TKFFLLHLSLMRDYLEL 333
F L ++++R+YLE+
Sbjct: 299 KPFIFLDVAILREYLEV 315
>gi|452818702|gb|EME25927.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 645
Score = 214 bits (544), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 206/391 (52%), Gaps = 59/391 (15%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAE-------VLEQKAKEKGERLP----TE 186
P+KL ++A+DGVAPRAK+NQQR RRFR+AKEAE + + K+KG R+P
Sbjct: 96 PRKLVYLAVDGVAPRAKINQQRSRRFRAAKEAEEKQKELLRVRDEWKKKGLRVPEYDPNR 155
Query: 187 KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGE 246
K FDSN ITPGTPFM L L+ F+ ++ D + + VI S PGE
Sbjct: 156 KPFDSNVITPGTPFMTNLSVALKQFIADRVAHDP---------AYNKISVIYSDSSVPGE 206
Query: 247 GEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNK 306
GEHKI ++IR +++ Y+PN H LYGLDADLIML L THE F +LRE V + + ++
Sbjct: 207 GEHKIAEFIRTQRAQEGYDPNTSHVLYGLDADLIMLALATHELNFYVLRERVFPSPQQSE 266
Query: 307 GGSQIVTPEETK------------------FFLLHLSLMRDYLELEFGKLKEPGV----- 343
Q +++K F LL + ++R+ LE EF + E G
Sbjct: 267 QKRQPQEAQDSKIQDSSDIQNAAAIGARNSFQLLSIDILRECLEAEFMEPLEIGFEMESS 326
Query: 344 ---LSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYI 400
F +E +IDD+V + F +GNDF+P+LP L I GA+ L ++Y++++P
Sbjct: 327 SRHQRLEFDLERVIDDFVFLCFFVGNDFLPHLPSLDIREGAIDYLIELYKKLVPRFGYLS 386
Query: 401 NEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDL 460
++ G ++ R FL +LA+ + F+++ + E K K+ ++ + K E+ D
Sbjct: 387 DDKGEIHFGRVRLFLNELATTEDYIFQKRKLE----EEKKQKQQAERATENKQSEVQNDR 442
Query: 461 AALI---------KATDDDYDDGTEEVLNYA 482
L KA DD T + LN+A
Sbjct: 443 TKLSRTREDYENRKAEDDANLKETRDSLNFA 473
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 94/151 (62%), Gaps = 30/151 (19%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIP---------------------EFDNLYLDMNGI 39
MGVP FFR++S +YP + V E P EFDNLYLDMNGI
Sbjct: 1 MGVPAFFRWLSLKYPKVLCDVIELVGPYDQQQGDFVSIDPTEPNPNGREFDNLYLDMNGI 60
Query: 40 IHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
IH C+HP + P TE+++F++IF YI+ L MI+P+KL ++A+DGVAPRAK+NQQR
Sbjct: 61 IHPCTHPENRPPP--TTEEEMFEEIFRYIDRLVYMIRPRKLVYLAVDGVAPRAKINQQRS 118
Query: 100 RRFRSAKEAE-------VLEQKAKEKGERLP 123
RRFR+AKEAE + + K+KG R+P
Sbjct: 119 RRFRAAKEAEEKQKELLRVRDEWKKKGLRVP 149
Score = 63.9 bits (154), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAEC---YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYIS 564
K YY K ++ + R + E Y + W + YYY GCVSW+WY+P+HYAP+ S
Sbjct: 575 KERYYEKKFHWSPQSETSQRKREELAYKYFEGLLWVMRYYYRGCVSWTWYFPYHYAPFAS 634
Query: 565 DI 566
D+
Sbjct: 635 DL 636
>gi|426198151|gb|EKV48077.1| hypothetical protein AGABI2DRAFT_191725, partial [Agaricus bisporus
var. bisporus H97]
Length = 315
Score = 214 bits (544), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 183/377 (48%), Gaps = 106/377 (28%)
Query: 1 MGVPKFFRYISERYPCL---SEVVREYQIP---------------------EFDNLYLDM 36
MGVP FR++S++YP + E E +IP EFDNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIIYPVEEEEESKIPDDNGVEVTVPVNMLLPNPNGVEFDNLYLDM 60
Query: 37 NGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQ 96
NGI+H C+HP E + F Y + + MI+P+KL FMAIDGVAPRAKMNQ
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEV--FKYTDRVVNMIRPRKLLFMAIDGVAPRAKMNQ 118
Query: 97 QRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMN 156
QR RRFRS+ +A K KE
Sbjct: 119 QRSRRFRSSHDA-----KEKEDA------------------------------------- 136
Query: 157 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKI 216
+Q + A E+ E++ KE +DSN ITPGTPFM L LRY+V K+
Sbjct: 137 RQESIKIWKAMGKEITEEEHKEA---------WDSNAITPGTPFMDLLATSLRYWVVQKM 187
Query: 217 TTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLD 276
TD WK++ V++S PGEGEHKIMD+IR +S P ++PN +H +YGLD
Sbjct: 188 NTDP---------AWKNIQVLISDAGVPGEGEHKIMDFIRRQRSNPGHDPNTQHVIYGLD 238
Query: 277 ADLIMLGLCTHEPYFSLLREEVKFN--------------------TKSNKGGSQIVTPEE 316
ADLIML L THEP F +LRE+V N T + + P++
Sbjct: 239 ADLIMLALATHEPNFRVLREDVFANDTKPTACRMCGQEGHYAAQCTGTKAEIEKKTPPDK 298
Query: 317 TKFFLLHLSLMRDYLEL 333
F L ++++R+YLE+
Sbjct: 299 KPFIFLDVAILREYLEV 315
>gi|449442897|ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cucumis sativus]
Length = 934
Score = 213 bits (543), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 150/441 (34%), Positives = 218/441 (49%), Gaps = 96/441 (21%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MGVP F+R++++RYP +++VV E + + ++ S PN N F
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPID-----VSKPNPNGMEF----DN 51
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
++ D+ I F +G P A + F+S
Sbjct: 52 LYLDMNGIIHPCFHP-----------EGKPPPATYDAV----FKSI-------------- 82
Query: 120 ERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEV------ 171
FD+I F P+K+ +MAIDGVAPRAKMNQQR RRFR+AK+A
Sbjct: 83 --------FDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRFRAAKDAAEAEAEEE 134
Query: 172 -LEQKAKEKGERL-PTEK--RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
L ++ + +G+ L P EK DSN ITPGT FM L L+Y+ + ++ + W+ T
Sbjct: 135 RLRKEFEAEGQTLLPKEKPETCDSNVITPGTEFMGVLSVALQYYAQSRLNHNPGWRFTK- 193
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
VILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLIML L TH
Sbjct: 194 --------VILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATH 245
Query: 288 EPYFSLLREEVKFNTKSNK------------------------GGSQIVTPEETKFFLLH 323
E +FS+LRE + + K G+ + K+ L+
Sbjct: 246 EVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLN 305
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
+ ++R+YL+ E P F + E I+DD+V + F +GNDF+P++P L I GA+
Sbjct: 306 IWVLREYLQYELDIPNPP----FEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAIN 361
Query: 384 LLYKVYQEVLPTLDGYINEGG 404
LL +Y++ P + GY+ + G
Sbjct: 362 LLMHIYRKEFPAIGGYLTDAG 382
Score = 164 bits (415), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 111/173 (64%), Gaps = 3/173 (1%)
Query: 507 HKTDYYHYKLDYAKVTN--EVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYIS 564
+K YY K + A N E+ +D Y+ + W YYY+G SW WYYP+HY+P+ S
Sbjct: 418 YKERYYAEKFN-ANPANIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFAS 476
Query: 565 DIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFA 624
D+K+ + L + + +GEPF PF QL+ LPAAS LPE Y+NLMT +SPILE+YP +F
Sbjct: 477 DLKNLADLEITFFIGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDPSSPILEFYPSDFE 536
Query: 625 TDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
D+NGK+ W+ V +PFIDE KL+ +E LTDEE++RN ++YT+
Sbjct: 537 IDMNGKRFQWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSVMLDMLYTH 589
>gi|326437826|gb|EGD83396.1| single-stranded RNA 5'-3' exonuclease [Salpingoeca sp. ATCC 50818]
Length = 1780
Score = 213 bits (541), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 164/295 (55%), Gaps = 54/295 (18%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+ F+AIDGVAPRAKM QQR RRF++A+ + +Q E G+ FDSNCITPG
Sbjct: 75 PRKVLFIAIDGVAPRAKMIQQRQRRFKAARARKQFQQDNPEHGDA------FDSNCITPG 128
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM L + L YF++ K+ D W+D+ V+LSGH PGEGEHKIMD++R
Sbjct: 129 TEFMATLEEYLIYFIQRKVEEDA---------AWRDLEVVLSGHRVPGEGEHKIMDFVRR 179
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNK-----GGSQIV 312
+KS+ Y+PN RHC++GLDADLIML L THEP+F ++RE+V + K V
Sbjct: 180 LKSQESYDPNTRHCIHGLDADLIMLALATHEPHFCIVREKVLVRKRGRKIVNDLTSKATV 239
Query: 313 TPEETKFFLLHLSLMRDYLELEF-----GKLKEPGVLSFPFS------------------ 349
+ L+H+ L+R+YL LE G G++S +
Sbjct: 240 FQHTQELQLIHIGLLREYLHLELSLRNIGPDFRQGLVSSAAALRDAMVDAKFRQLPEEMQ 299
Query: 350 -----------IENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVL 393
+E +IDD+V + FL+GNDF+P+L + + L ++ Y+E +
Sbjct: 300 ALRTSVVQSRNVERLIDDFVFLTFLLGNDFLPHLVCADLDDDGLDAIFSAYREAI 354
Score = 185 bits (469), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 203/816 (24%), Positives = 346/816 (42%), Gaps = 111/816 (13%)
Query: 510 DYYHYKLDYAK---VTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI 566
DYY K + + V VL + Y+ + W L+YYY G SWSW+YPH+ AP +D+
Sbjct: 981 DYYRVKFEDVEGHPVDRVVLVKE---YLEGLLWTLNYYYQGVASWSWFYPHYAAPLPTDV 1037
Query: 567 KDFSHL--NLKYEM-GEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEF 623
+ ++ ++ P LPFQQLL VLPA S +LL +L L + E+YP E+
Sbjct: 1038 LAACDVLPSIAFDAETTPLLPFQQLLTVLPAESSQLL---PPSLRPLPLDQLKEFYPSEY 1094
Query: 624 ATDLNGKKQDWEAVVLIPFIDEVKL----IKAMDAVEHLLTDEERSRNRHGPMLVYTYSN 679
+ + ++W +V+IP ID KL +A+ A L+DEE +RN H P +T+ +
Sbjct: 1095 PCVPDVRGREWRDIVVIPVIDGEKLHSAYTRAIAAAP--LSDEETARNSHAPATRFTFDS 1152
Query: 680 VNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVT-------H 732
P P A + + P L +G + V L T
Sbjct: 1153 SAAHMNKPP---PGAEMLRAHTTRCSSAPLELGP--LPEGRFKPVVLPKCNTGPFAPPPA 1207
Query: 733 FPTLKHVQFTHKIENAKVKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYP 791
FPTLK ++FT +++ V+V SR S+ I ++D +Q PS + A++ N P
Sbjct: 1208 FPTLKFLRFTATLDDIGVRVLGPRSRLPSLCIRLEDGLQPPSARPSAEEQRATAKAANDP 1267
Query: 792 HLIEIRVQAVATKDSRI--------------------------SFDKNSGPVFERAAKDM 825
++ V+ + K +RI ++D+ F R +
Sbjct: 1268 ENFDLYVEDI--KRARIAQTIRLLLNKTYTVDYPFPCVGKVVSAYDEEGHHRFHRGQVKV 1325
Query: 826 Q-DA-FQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTF---- 879
Q DA ++ + ++ + Y TK GVD+G+ E+L+ P+ RG V Q ++
Sbjct: 1326 QADATWEEKRTTVRNEYLTKRGVDVGDIELLLEVAPL---------RG-VVQTTSYNVVE 1375
Query: 880 ---IRSTVTYAYQSAVLNLQQARESLEYKTIDE---IFYPGCQCFALSNPHYGSGGCVIS 933
+++TV Q+ +A + E + D + G C L ++G V
Sbjct: 1376 DFDMQNTVLVPAQAIPSTKPRADKRFETRQRDRSKPLLEKGDACVCLLEDNFGVTARVTG 1435
Query: 934 TVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVY-----NYLPSYTVASKLSISPLLLSRF 988
T + + + + PD + ++ A + I + SR
Sbjct: 1436 TTSKHEQLLYVIKSIPSPPDEFESAAAFAAKRLAAQEEEFMDEPKAARAVGIKTITFSRL 1495
Query: 989 TGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFT------RRDETTKKWFYTEQVVTL 1042
I + +G +R +IGL IKFSR+ + G++ RR +W YT+ V+L
Sbjct: 1496 ASCISV--RLPDG-QRADIGLGIKFSRRQLYMAGYSRAVPDKRRGNGAVRWQYTQAAVSL 1552
Query: 1043 IKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQG--EQRVAQIVSWLKEQPHAKAEVRPC 1100
++ +F + + D++ + H E Q++++L + P A+ + C
Sbjct: 1553 MQELKTKFSALMAVIDSDPKQDLFDLKQLLRHDSDVESTADQLLAFLADLPTAQQPLTSC 1612
Query: 1101 GAAVVDAKVVSLIEHAVDTCEKVEKQI---TLFVKPNKLYIPKPTLDKLCPDPD-TKFKL 1156
+ + ++ +E A+D K + TL V L +P + D F +
Sbjct: 1613 DSRAMPPHAIAQLEQAIDDARSAHKDLLTETLRVAEFGL---RPAVRLPTAHRDHASFGI 1669
Query: 1157 FDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYR 1214
RVV I D VP G GT +G+ + V+FD+PF G + RC RGY
Sbjct: 1670 GHRVVCICDSGPVPFGLTGTAVGV----EARGQRVQVLFDEPFLSGNNLGGRCRGFRGYT 1725
Query: 1215 MPAQAMINL-SYGERLCGNSNPHVKNINVMQSRGER 1249
+P +++NL + R+ P + + RG++
Sbjct: 1726 LPHWSLLNLTTRAGRVAKRYQPKSSGGSGGKQRGKK 1761
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 79/120 (65%), Gaps = 2/120 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP+ FR + ERYP + + E PEFDNLYLD NGI+H C+H N+ +++++
Sbjct: 1 MGVPRLFRLLVERYPLILRGLDEPPPPEFDNLYLDFNGIVHTCTH--GNELAATRSQQEM 58
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
IF IE L I+P+K+ F+AIDGVAPRAKM QQR RRF++A+ + +Q E G+
Sbjct: 59 MMAIFSAIEQLVDAIKPRKVLFIAIDGVAPRAKMIQQRQRRFKAARARKQFQQDNPEHGD 118
>gi|403331887|gb|EJY64917.1| 5'-3' exonuclease [Oxytricha trifallax]
Length = 1130
Score = 208 bits (530), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/452 (32%), Positives = 209/452 (46%), Gaps = 92/452 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR++S RYP ++ + + ++LY D + PN+ + +
Sbjct: 1 MGVPAFFRWLSVRYPKVA--INALSDEDLEHLYDDFKKTSDDNKDPNEINL--------L 50
Query: 61 FQDIFHYIEILFRMIQPK-KLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
D+ IE R P+ ++ ++G+ Q + + E E+
Sbjct: 51 DGDLDGEIEKRVRENNPEFDNLYLDMNGIIHPCTHPQDKPQ---PTSETEMFNNI----- 102
Query: 120 ERLPTEKRFDFI--TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSA----------- 166
FD+ +K P++L +MA+DGVAPRAKMNQQR RRFR A
Sbjct: 103 --------FDYTDKIMKIVRPQRLIYMAVDGVAPRAKMNQQRSRRFRGALDTEEREQREE 154
Query: 167 -------KEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTD 219
KE QK K E +FD N ITPGT FM RL + L+Y+V ++ TD
Sbjct: 155 EIRGKWSKEGIKFSQK---KDEEDGDSDKFDQNVITPGTEFMFRLSKALQYYVMERLQTD 211
Query: 220 KLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADL 279
LWKD + VI S PGEGEHKI+D+IR + + YNPN RHC+YG DADL
Sbjct: 212 SLWKD---------IKVIFSDASNPGEGEHKILDFIRSQRLQAGYNPNTRHCIYGADADL 262
Query: 280 IMLGLCTHEPYFSLLREEVKFNT--KSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGK 337
IMLGL THEP+F++LRE V ++ K G E K
Sbjct: 263 IMLGLSTHEPHFAILREAVLMDSDKKCTYCGQNGHLNSECK------------------- 303
Query: 338 LKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLD 397
P + P + NDF+P+LP LHI GAL + +Y+ +LP+L
Sbjct: 304 -SNPDIAGGP-----------KVQLSRSNDFLPHLPSLHIREGALDAILVIYKNLLPSLG 351
Query: 398 GYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
Y+ + G ++ + + +A + E F+ K
Sbjct: 352 DYLTKNGEIDFGKVDIIFNDIAKIEEESFKMK 383
Score = 150 bits (378), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 121/219 (55%), Gaps = 15/219 (6%)
Query: 494 EEWRTNFFSEFGQHKTDYYHYKL-DYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWS 552
E W+ ++ D +H + D+ + T+++ + YI +QW YYY GCVSW
Sbjct: 547 EGWKLRYYQ-------DKFHIDVNDFQEFTDKI----KQAYIEGLQWVYSYYYKGCVSWY 595
Query: 553 WYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLEN 612
W+YP+HYAP+ SD+ + + +K+EMG P PF+QL+ V+P S +P Y++L++
Sbjct: 596 WFYPYHYAPFASDLVNCDRVKIKFEMGVPAQPFEQLMGVMPKQSAHCIPPCYRHLLSSPK 655
Query: 613 SPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEH---LLTDEERSRNRH 669
S I+++YP +F D+NG + W V L+PFID +LIKAM + LT E+ RNR
Sbjct: 656 SEIIDFYPIDFRLDINGARYAWMGVNLLPFIDRQRLIKAMRKADQDGAKLTPIEQDRNRT 715
Query: 670 GPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDD 708
G ++++ N +AL +N N + R D
Sbjct: 716 GTVMLFFARNEKSESALQQTLDKKLNGNLELFASFQRKD 754
>gi|221482303|gb|EEE20658.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii GT1]
Length = 1239
Score = 207 bits (527), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 129/353 (36%), Positives = 179/353 (50%), Gaps = 75/353 (21%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE--------AEVLEQKAKEKGERLPTEKRF 189
P++L ++AIDGVAPRAKMNQQR RRF++AK+ AE+ Q E E P + R+
Sbjct: 116 PRQLLYLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKKMRW 175
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSN ITPGTPFM RL L Y+++ ++ T++ WK + VI S PGEGEH
Sbjct: 176 DSNVITPGTPFMHRLADALTYYIQDRLATNE---------NWKGLRVIFSDATVPGEGEH 226
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLRE------------- 296
KIMD+IR + ++ PN+RH L+G DADLIMLGL THE FS+LRE
Sbjct: 227 KIMDFIRQQRKSGEFCPNLRHVLHGADADLIMLGLATHEANFSILREAVVDRTPEQVCSA 286
Query: 297 --EVKFNTKSNKGGSQIVTPEETKFF---------------------------------- 320
V + ++ S + P++ F
Sbjct: 287 CGAVGHSAENCPASSSVQAPDDRAFRVFEQDKRGLKRHLEARGVELREDWATGLESHRRA 346
Query: 321 -----LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
+L L ++R+YL EF +E G F +E IDD+V + FL GNDF+P+LP
Sbjct: 347 WKPLQMLQLPVLREYLAYEFITSQEEGQ---SFDLERCIDDFVFLCFLCGNDFLPHLPHQ 403
Query: 376 HIINGALPLLYKVYQEVLP-TLDGYINEGGYLNLKRFEKFLTKLASFDFEQFR 427
I G++ L ++Y ++ P L Y+ G +NL FL LA + E R
Sbjct: 404 SIQRGSIDALVQLYLQLRPQVLTDYLTREGRVNLPELYTFLHHLAIVEKEVVR 456
Score = 125 bits (315), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 96/209 (45%), Gaps = 41/209 (19%)
Query: 520 KVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLK---- 575
K ++ D A YI +QW L YYY GC S+ W++P HYAP D+ D LK
Sbjct: 695 KDVEQLASDVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAPLAVDLADELQRRLKLDDQ 754
Query: 576 -------------------------------------YEMGEPFLPFQQLLAVLPAASKE 598
+ +G PF F+QL+AVLP S
Sbjct: 755 KEERERRGSALGSVQGLPRCGHSRGVSLGQDGNFEISFTLGTPFRAFEQLMAVLPPYSAS 814
Query: 599 LLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHL 658
LP + +M S I ++YP + D NGK+ W+ VVL+PFIDE +L++ +E
Sbjct: 815 CLPREHAAVMMNPRSAIADFYPSDVKMDPNGKRHQWQWVVLLPFIDENRLLRTCKPLEKF 874
Query: 659 LTDEERSRNRHGPMLVYTYSNVNLGTALA 687
LT EER RNR G +Y + + L LA
Sbjct: 875 LTLEERERNRRGSDRLYVHRSHPLARTLA 903
Score = 103 bits (257), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 88/178 (49%), Gaps = 51/178 (28%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPE-------------------------------- 28
MGVP F+R++ RYP + V E + E
Sbjct: 1 MGVPTFYRWLCSRYPRVVIDVGENHVQEMREELRQKKEQQRQQAAKEKEATSTDGQENND 60
Query: 29 ---------FDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKK 79
+D LYLDMNGIIH C H +D TE+++F IF Y++ + +I+P++
Sbjct: 61 AETTEEDFAYDCLYLDMNGIIHPCCHTDDGS--CPATEEEMFLSIFQYVDRIVDIIRPRQ 118
Query: 80 LFFMAIDGVAPRAKMNQQRGRRFRSAKE--------AEVLEQKAKEKGERLPTEKRFD 129
L ++AIDGVAPRAKMNQQR RRF++AK+ AE+ Q E E P + R+D
Sbjct: 119 LLYLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKKMRWD 176
>gi|237842105|ref|XP_002370350.1| exoribonuclease, putative [Toxoplasma gondii ME49]
gi|211968014|gb|EEB03210.1| exoribonuclease, putative [Toxoplasma gondii ME49]
Length = 1239
Score = 207 bits (527), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 129/353 (36%), Positives = 179/353 (50%), Gaps = 75/353 (21%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE--------AEVLEQKAKEKGERLPTEKRF 189
P++L ++AIDGVAPRAKMNQQR RRF++AK+ AE+ Q E E P + R+
Sbjct: 116 PRQLLYLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKKMRW 175
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSN ITPGTPFM RL L Y+++ ++ T++ WK + VI S PGEGEH
Sbjct: 176 DSNVITPGTPFMHRLADALTYYIQDRLATNE---------NWKGLRVIFSDATVPGEGEH 226
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLRE------------- 296
KIMD+IR + ++ PN+RH L+G DADLIMLGL THE FS+LRE
Sbjct: 227 KIMDFIRQQRKSGEFCPNLRHVLHGADADLIMLGLATHEANFSILREAVVDRTPEQVCSA 286
Query: 297 --EVKFNTKSNKGGSQIVTPEETKFF---------------------------------- 320
V + ++ S + P++ F
Sbjct: 287 CGAVGHSAENCPASSSVQAPDDRAFRVFEQDKRGLKRHLEARGVELREDWATGLESHRRA 346
Query: 321 -----LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
+L L ++R+YL EF +E G F +E IDD+V + FL GNDF+P+LP
Sbjct: 347 WKPLQMLQLPVLREYLAYEFITSQEEGQ---SFDLERCIDDFVFLCFLCGNDFLPHLPHQ 403
Query: 376 HIINGALPLLYKVYQEVLP-TLDGYINEGGYLNLKRFEKFLTKLASFDFEQFR 427
I G++ L ++Y ++ P L Y+ G +NL FL LA + E R
Sbjct: 404 SIQRGSIDALVQLYLQLRPQVLTDYLTREGRVNLPELYTFLHHLAIVEKEVVR 456
Score = 125 bits (315), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 96/209 (45%), Gaps = 41/209 (19%)
Query: 520 KVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLK---- 575
K ++ D A YI +QW L YYY GC S+ W++P HYAP D+ D LK
Sbjct: 695 KDVEQLASDVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAPLAVDLADELQRRLKLDDQ 754
Query: 576 -------------------------------------YEMGEPFLPFQQLLAVLPAASKE 598
+ +G PF F+QL+AVLP S
Sbjct: 755 KEERERRGSALGSVQGLPRCGHSRGVSLGQDGNFEISFTLGTPFRAFEQLMAVLPPYSAS 814
Query: 599 LLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHL 658
LP + +M S I ++YP + D NGK+ W+ VVL+PFIDE +L++ +E
Sbjct: 815 CLPREHAAVMMNPRSAIADFYPSDVKMDPNGKRHQWQWVVLLPFIDENRLLRTCKPLEKF 874
Query: 659 LTDEERSRNRHGPMLVYTYSNVNLGTALA 687
LT EER RNR G +Y + + L LA
Sbjct: 875 LTLEERERNRRGSDRLYVHRSHPLARTLA 903
Score = 103 bits (257), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 88/178 (49%), Gaps = 51/178 (28%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPE-------------------------------- 28
MGVP F+R++ RYP + V E + E
Sbjct: 1 MGVPTFYRWLCSRYPRVVIDVGENHVQEMREELRQKKEQQRQQAAKEKEATSTDGQENND 60
Query: 29 ---------FDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKK 79
+D LYLDMNGIIH C H +D TE+++F IF Y++ + +I+P++
Sbjct: 61 AETTEEDFAYDCLYLDMNGIIHPCCHTDDGS--CPATEEEMFLSIFQYVDRIVDIIRPRQ 118
Query: 80 LFFMAIDGVAPRAKMNQQRGRRFRSAKE--------AEVLEQKAKEKGERLPTEKRFD 129
L ++AIDGVAPRAKMNQQR RRF++AK+ AE+ Q E E P + R+D
Sbjct: 119 LLYLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKKMRWD 176
>gi|221502801|gb|EEE28515.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii VEG]
Length = 1239
Score = 207 bits (527), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 129/353 (36%), Positives = 179/353 (50%), Gaps = 75/353 (21%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE--------AEVLEQKAKEKGERLPTEKRF 189
P++L ++AIDGVAPRAKMNQQR RRF++AK+ AE+ Q E E P + R+
Sbjct: 116 PRQLLYLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKKMRW 175
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSN ITPGTPFM RL L Y+++ ++ T++ WK + VI S PGEGEH
Sbjct: 176 DSNVITPGTPFMHRLADALTYYIQDRLATNE---------NWKGLRVIFSDATVPGEGEH 226
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLRE------------- 296
KIMD+IR + ++ PN+RH L+G DADLIMLGL THE FS+LRE
Sbjct: 227 KIMDFIRQQRKSGEFCPNLRHVLHGADADLIMLGLATHEANFSILREAVVDRTPEQVCSA 286
Query: 297 --EVKFNTKSNKGGSQIVTPEETKFF---------------------------------- 320
V + ++ S + P++ F
Sbjct: 287 CGAVGHSAENCPASSSVQAPDDRAFRVFEQDKRGLKRHLEARGVELREDWDTGLESHRRA 346
Query: 321 -----LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
+L L ++R+YL EF +E G F +E IDD+V + FL GNDF+P+LP
Sbjct: 347 WKPLQMLQLPVLREYLAYEFITSQEEGQ---SFDLERCIDDFVFLCFLCGNDFLPHLPHQ 403
Query: 376 HIINGALPLLYKVYQEVLP-TLDGYINEGGYLNLKRFEKFLTKLASFDFEQFR 427
I G++ L ++Y ++ P L Y+ G +NL FL LA + E R
Sbjct: 404 SIQRGSIDALVQLYLQLRPQVLTDYLTREGRVNLPELYTFLHHLAIVEKEVVR 456
Score = 125 bits (315), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 96/209 (45%), Gaps = 41/209 (19%)
Query: 520 KVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLK---- 575
K ++ D A YI +QW L YYY GC S+ W++P HYAP D+ D LK
Sbjct: 695 KDVEQLASDVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAPLAVDLADELQRRLKLDDQ 754
Query: 576 -------------------------------------YEMGEPFLPFQQLLAVLPAASKE 598
+ +G PF F+QL+AVLP S
Sbjct: 755 KEERERRGSALGSVQGLPRCGHSRGVSLGQDGNFEISFTLGTPFRAFEQLMAVLPPYSAS 814
Query: 599 LLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHL 658
LP + +M S I ++YP + D NGK+ W+ VVL+PFIDE +L++ +E
Sbjct: 815 CLPREHAAVMMNPRSAIADFYPSDVKMDPNGKRHQWQWVVLLPFIDENRLLRTCKPLEKF 874
Query: 659 LTDEERSRNRHGPMLVYTYSNVNLGTALA 687
LT EER RNR G +Y + + L LA
Sbjct: 875 LTLEERERNRRGSDRLYVHRSHPLARTLA 903
Score = 103 bits (257), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 88/178 (49%), Gaps = 51/178 (28%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPE-------------------------------- 28
MGVP F+R++ RYP + V E + E
Sbjct: 1 MGVPTFYRWLCSRYPRVVIDVGENHVQEMREELRQKKEQQRQQAAKEKEATSTDGQENND 60
Query: 29 ---------FDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKK 79
+D LYLDMNGIIH C H +D TE+++F IF Y++ + +I+P++
Sbjct: 61 AETTEEDFAYDCLYLDMNGIIHPCCHTDDGS--CPATEEEMFLSIFQYVDRIVDIIRPRQ 118
Query: 80 LFFMAIDGVAPRAKMNQQRGRRFRSAKE--------AEVLEQKAKEKGERLPTEKRFD 129
L ++AIDGVAPRAKMNQQR RRF++AK+ AE+ Q E E P + R+D
Sbjct: 119 LLYLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKKMRWD 176
>gi|66359900|ref|XP_627128.1| Rat1 Kar1/Rat1 like 5'-3' exonuclease [Cryptosporidium parvum Iowa
II]
gi|46228551|gb|EAK89421.1| Rat1 Kar1/Rat1 like 5'-3' exonuclease [Cryptosporidium parvum Iowa
II]
Length = 1350
Score = 207 bits (526), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 178/360 (49%), Gaps = 82/360 (22%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-------EVLEQKAKEKGERLPTE-KRF 189
P++L +MAIDGVAPRAKMNQQR RR+++A E E+ +++ + G + P +++
Sbjct: 91 PRRLIYMAIDGVAPRAKMNQQRSRRYKTALEMDYNRRAYEIAQEEFSKIGYKCPEYVEKW 150
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSN ITPGTPFM RL L +++ K TD+ W+ + VI S PGEGEH
Sbjct: 151 DSNVITPGTPFMERLTMCLHAYIRRKFETDE---------SWRSISVIFSDSNIPGEGEH 201
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK---------- 299
KI+++IR +S DYNPN RH LYG DADLIMLGL THE YF ++RE V+
Sbjct: 202 KILEFIRNQRSNEDYNPNTRHVLYGSDADLIMLGLSTHESYFYIIREAVRDFKVESPSSI 261
Query: 300 ------------------------------------FNTKSNKGGSQIVTPEETKFFLLH 323
F N G + + ++
Sbjct: 262 SILYNTWIEKINNNHLGSSFGDNGTNNSSDIILNGIFQNGPNFGKKLRIYSWWSDIEIVD 321
Query: 324 LSLMRDYLELEFGKLKEP-GVLS------------------FPFSIENIIDDWVLMGFLI 364
LS++R+YL +FG++++ G ++ F + E IDD++ + F I
Sbjct: 322 LSMLREYLNFDFGEIRDQIGYINNNIGENLVNEYGMKNNSDFQYDFERCIDDFIFLCFFI 381
Query: 365 GNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFE 424
GNDF+PNLP I G+L + +Y VLP + Y+ G + +F L ++E
Sbjct: 382 GNDFLPNLPVFSIYKGSLDQILGIYIRVLPRIGDYLTLEGNIIPNSIIQFFKYLRDLEYE 441
Score = 127 bits (318), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 101/167 (60%), Gaps = 12/167 (7%)
Query: 523 NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF-----------SH 571
NE+ Y+R + W L YYY+G SW WYYP+HYAPY+ DI +
Sbjct: 695 NEISDQVCIHYLRGLSWVLGYYYHGVPSWDWYYPYHYAPYVMDIVELLSDVKNENKIKES 754
Query: 572 LNLKYEMGEPFLPFQQLLAVLPAASKEL-LPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
L ++ +G+PF F+QL++VLP S ++ LP+ + N+M +++P+ E+YP +F D NG
Sbjct: 755 LIGEFNLGKPFTQFEQLMSVLPPKSGKICLPKEFYNMMIDKDNPLSEFYPSKFKQDPNGN 814
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
KQ W+ V L+PFID+ L++ + +E+ + + RN+ G ++Y++
Sbjct: 815 KQRWKWVALLPFIDQKVLLETVIPLENEMDVLSKYRNKLGCDILYSF 861
Score = 107 bits (266), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 81/126 (64%), Gaps = 20/126 (15%)
Query: 1 MGVPKFFRYISERYP--------------CLSEV-VREYQI-PEFDNLYLDMNGIIHNCS 44
MGVP F+R++ RYP CL+++ + E I EFD LYLDMNGIIH C
Sbjct: 1 MGVPTFYRWLCNRYPLIVKELKDAVDEETCLNDLDLTEPNINGEFDCLYLDMNGIIHPCC 60
Query: 45 HPNDND-PHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFR 103
+P+ D P E ++F + YI+ L+ M++P++L +MAIDGVAPRAKMNQQR RR++
Sbjct: 61 NPSGGDKPK---DEAEMFTRVCDYIDRLYAMVKPRRLIYMAIDGVAPRAKMNQQRSRRYK 117
Query: 104 SAKEAE 109
+A E +
Sbjct: 118 TALEMD 123
>gi|255941486|ref|XP_002561512.1| Pc16g12130 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586135|emb|CAP93883.1| Pc16g12130 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1015
Score = 207 bits (526), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 152/475 (32%), Positives = 220/475 (46%), Gaps = 122/475 (25%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FR++S +YP + V E Q P+ +D I + + PN N
Sbjct: 1 MGVPALFRWLSNKYPKIVSPVIEEQ-PQV----VDGEEIPIDITRPNPNG---------- 45
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ + ++ ++G+ E A E+
Sbjct: 46 ---------------EEQDNLYLDMNGIV-------------HPCTHPEGKPPPADEQEM 77
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAE---------- 170
+ K D + + P+KL +AIDGVAPRAKMNQQR RRFRSA+EA+
Sbjct: 78 MMEIYKYTDRV-VNMVRPRKLLMIAIDGVAPRAKMNQQRARRFRSAQEAKENDQKKEELH 136
Query: 171 --VLEQKAKEKGERLPTE----KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKD 224
+ +Q A + GE+L E K +DSN ITPGTPFM L LRY++ K+ TD
Sbjct: 137 KMLAQQHATKTGEQLIREEVVQKTWDSNVITPGTPFMDILAASLRYWIAYKLNTDP---- 192
Query: 225 TLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGL 284
W+++ +I+S PGEGEHKIM++ DADLIMLGL
Sbjct: 193 -----GWENLKIIISDATVPGEGEHKIMNF---------------------DADLIMLGL 226
Query: 285 CTHEPYFSLLREEVKFNTKSNKGGSQIVT------------PEETK-------------- 318
THEPYF +LRE+V F S G ++ P+E
Sbjct: 227 GTHEPYFRVLREDV-FAQDSRPRGCRLCGQNGHKAEECLGRPKEKSGEFDEKQHAAPLKP 285
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
F LH++++R+YL +E ++P FPF +E +DDWV M F +GNDF+P+LP L I
Sbjct: 286 FIWLHVAVLREYLAVELRVPQQP----FPFDLERALDDWVFMCFFVGNDFLPHLPSLDIR 341
Query: 379 NGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF-REKYAD 432
+ L ++++ LP + Y+ + G + LK + L LA + F R + AD
Sbjct: 342 ENGIDTLIAIWRDSLPAMGSYLTKDGSVELKNAQIILQGLAKQEDAIFARRRQAD 396
Score = 163 bits (413), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 102/160 (63%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y + W L YY+ GC SW+WYYP HYAP+ +D D +
Sbjct: 581 YYEQKFGVDPKDLEFRHQVAREYAIGLCWVLRYYFQGCPSWTWYYPRHYAPFAADFVDIA 640
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+++K+E G F PF+QL+ VLPA+S LP+ + LM +S I+++YPE+F DLNGK
Sbjct: 641 DMDVKFEKGTIFKPFEQLMGVLPASSNHALPKVFHPLMESPDSEIIDFYPEDFPLDLNGK 700
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V+L+PFIDE +L+ AM V LLT++E+SRN HG
Sbjct: 701 KFAWQGVILLPFIDETRLLNAMAKVYPLLTEDEKSRNTHG 740
>gi|74184155|dbj|BAE37081.1| unnamed protein product [Mus musculus]
Length = 109
Score = 206 bits (524), Expect = 1e-49, Method: Composition-based stats.
Identities = 90/109 (82%), Positives = 105/109 (96%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R+ISERYPCLSEVV+E+QIPEFDNLYLDMNGIIH CSHPND+D HFRI++ +I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAE 109
F DIFHY+E+LFR+I+P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAE 109
Score = 68.9 bits (167), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAE 170
P+K+FFMA+DGVAPRAKMNQQRGRRFRSAKEAE
Sbjct: 77 PRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAE 109
>gi|85014269|ref|XP_955630.1| 5-3 exoribonuclease [Encephalitozoon cuniculi GB-M1]
gi|19171324|emb|CAD27049.1| RIBONUCLEIC TRAFFICKING PROTEIN 1 (5'3'exoribonuclease)
[Encephalitozoon cuniculi GB-M1]
Length = 655
Score = 206 bits (523), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 185/636 (29%), Positives = 282/636 (44%), Gaps = 148/636 (23%)
Query: 129 DFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSA---KEAEVLEQKAK-------- 177
D I LK P+KL ++A+DGVAPRAK++ QR RR++SA KE + AK
Sbjct: 65 DHILLK-TRPRKLLYIAVDGVAPRAKLSHQRARRYKSALGKKEGSAVIAAAKADPTMSSP 123
Query: 178 -EKGERLPTEK-----------------------------RFDSNCITPGTPFMCRLHQQ 207
EK + +P E+ +FD NCITPGTPFM RLH+
Sbjct: 124 SEKKDEIPNEEFTGESSLYDKFIAEDPSESSSLAIDVETEKFDLNCITPGTPFMERLHKV 183
Query: 208 LRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPN 267
L +++ K+++D ++ +I S + PGEGE KIM +IR S+ N
Sbjct: 184 LISYIQCKLSSDP---------EVSNLRIIYSSYLVPGEGEQKIMSFIR---SQGSIARN 231
Query: 268 MRHCLYGLDADLIMLGLCTHE-------PYFSLLREEVKFN-TKSNKGG---SQIVTPEE 316
H +Y D DLI LGL YFS +E K TK + G +
Sbjct: 232 DVHMIYSPDGDLIFLGLSLQRNRVLIMRDYFSPSKERRKRTCTKCGRTGHSDEECGVFTN 291
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F +++S +R L EF + FS E I+DDW+ + FL+GNDF+P +P L
Sbjct: 292 YHFVYVNISELRTRLIREFRRHTAQR-----FSEERILDDWIFLCFLLGNDFVPPIPCLD 346
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL 436
I ++ + ++ + + YI +N ++ R YA
Sbjct: 347 IRFHSIETITEIMMKSFSEMKSYITCNKMIN---------------YQALRNFYA----- 386
Query: 437 EGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEW 496
+ K ++H+ KS+ +D L G ++ YE
Sbjct: 387 --ILASKEDGLYHR-KSQSLDKFREGL---------KGMPRIV----YE----------- 419
Query: 497 RTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYP 556
+ ++ G K YY KL+ T +++ Y++ + W YY G W WYYP
Sbjct: 420 KIPIHTKTG--KVQYYTSKLN--ATTESDIKNICYEYVKGLYWVYSYYVLGWTGWDWYYP 475
Query: 557 HHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPIL 616
+H+AP +D+ S +++ G P P +QLL VLP S+ ++PE Q PI
Sbjct: 476 YHFAPLAADLSKLSINDIQISPGHPLRPLEQLLVVLPPMSRGMVPEGLQ--------PIF 527
Query: 617 ----EYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVE-HLLTDEERSRNRHGP 671
+YYPE+ TD+ K W+ +VL+PF+D + I + +AV+ + L E+ SRN
Sbjct: 528 DDYKDYYPEDVKTDMFDKVYLWQEIVLLPFMD-FRPILSENAVKFNTLGYEDLSRNLRSL 586
Query: 672 MLVYTY----SNVNLG---------TALAPDYFPAI 694
L++T S V LG + +P YF I
Sbjct: 587 DLLFTTDKKSSEVILGMYSKLKPMCSIRSPGYFGTI 622
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 203/437 (46%), Gaps = 64/437 (14%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FR++ + + E P D LYLD N IIH C P E+ +
Sbjct: 1 MGVPSLFRWLQLSHKETIHSIMEK--PSVDALYLDFNAIIHTCIKPGLGSEE--EIERDL 56
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSA---KEAEVLEQKAK- 116
++ + +I+ + +P+KL ++A+DGVAPRAK++ QR RR++SA KE + AK
Sbjct: 57 YKTVGDFIDHILLKTRPRKLLYIAVDGVAPRAKLSHQRARRYKSALGKKEGSAVIAAAKA 116
Query: 117 EKGERLPTEKRFDFITLKFCFPKKLF--FMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQ 174
+ P+EK+ + +F L+ F+A D E+ L
Sbjct: 117 DPTMSSPSEKKDEIPNEEFTGESSLYDKFIAED------------------PSESSSLAI 158
Query: 175 KAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDV 234
+ TEK FD NCITPGTPFM RLH+ L +++ K+++D ++
Sbjct: 159 DVE-------TEK-FDLNCITPGTPFMERLHKVLISYIQCKLSSDP---------EVSNL 201
Query: 235 CVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH------- 287
+I S + PGEGE KIM +IR S+ N H +Y D DLI LGL
Sbjct: 202 RIIYSSYLVPGEGEQKIMSFIR---SQGSIARNDVHMIYSPDGDLIFLGLSLQRNRVLIM 258
Query: 288 EPYFSLLREEVKFN-TKSNKGG---SQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGV 343
YFS +E K TK + G + F +++S +R L EF +
Sbjct: 259 RDYFSPSKERRKRTCTKCGRTGHSDEECGVFTNYHFVYVNISELRTRLIREFRRHTAQR- 317
Query: 344 LSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEG 403
FS E I+DDW+ + FL+GNDF+P +P L I ++ + ++ + + YI
Sbjct: 318 ----FSEERILDDWIFLCFLLGNDFVPPIPCLDIRFHSIETITEIMMKSFSEMKSYITCN 373
Query: 404 GYLNLKRFEKFLTKLAS 420
+N + F LAS
Sbjct: 374 KMINYQALRNFYAILAS 390
>gi|326436856|gb|EGD82426.1| hypothetical protein PTSG_11962 [Salpingoeca sp. ATCC 50818]
Length = 1282
Score = 204 bits (520), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/332 (39%), Positives = 190/332 (57%), Gaps = 33/332 (9%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA--EVLEQKAKEKGERLPTEK----RFDS 191
P+KL FMAIDGVAPRAKMNQQR RRF+SAK VL G + FDS
Sbjct: 137 PRKLLFMAIDGVAPRAKMNQQRSRRFKSAKVCLNAVLWWGCVVGGGGVCISVCVCVTFDS 196
Query: 192 NCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKI 251
N ITPGTPFM +L + LR F+ K+++D W + VILS PGEGEHKI
Sbjct: 197 NVITPGTPFMDKLAEYLRCFIHEKVSSDP---------GWTGIKVILSDATVPGEGEHKI 247
Query: 252 MDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV----KFNTKSNKG 307
MD+IR ++ P+Y+ N H ++GLDADLI+L L THEP+F++LREEV + + K
Sbjct: 248 MDFIRRQRAHPEYDANTSHVIHGLDADLILLALATHEPHFTILREEVTPRNREKSAQEKA 307
Query: 308 GSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFP----FSIENIIDDWVLMGFL 363
+ + + L ++++R+YLE KE V F F +E +IDD+V M
Sbjct: 308 MAALAVRRVCIWIFLQVNVLREYLE------KEMRVADFSAAGGFDLERVIDDFVFMCCF 361
Query: 364 IGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDF 423
+GNDF+P+LP L I GA+ + +Y++ P GY+ + +NL+R + L LA +
Sbjct: 362 VGNDFLPHLPSLKINEGAIDTILDLYRKDFPAFGGYLTQSSEVNLERVQLLLHGLAEVE- 420
Query: 424 EQFREKYADIQYLEGKMGKKFSDVFHKEKSKE 455
+ +D ++ E + +K D+ +K+ ++E
Sbjct: 421 ---NKILSDRRFKEQRRKQKDVDITNKKTTRE 449
Score = 173 bits (439), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 111/185 (60%), Gaps = 2/185 (1%)
Query: 504 FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYI 563
G H +YKL + RD A Y+ + W + YYY GC SW+W+YP+HYAP+
Sbjct: 631 LGLHGYHERYYKLKFGDSVQP--RDVARAYVEGLCWVMKYYYEGCPSWNWFYPYHYAPFA 688
Query: 564 SDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEF 623
D D + ++++++ G PF PFQQL+AV P AS LP+ Y+NLM SPI ++YP EF
Sbjct: 689 QDFVDVAGMSIRFDGGSPFTPFQQLMAVFPPASSHALPQAYRNLMLDPKSPIADFYPREF 748
Query: 624 ATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLG 683
D +G + W+AV L+PFIDE +L+ A+ +E LT+EER RN G L++ + L
Sbjct: 749 ELDFDGARFAWQAVALLPFIDETRLLTAIAPLESTLTEEERRRNARGVNLLHVHQRHPLA 808
Query: 684 TALAP 688
+ P
Sbjct: 809 LQVVP 813
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 80/127 (62%), Gaps = 25/127 (19%)
Query: 1 MGVPKFFRYISERYP-CLSEVVR--------EYQIP-----------EFDNLYLDMNGII 40
+GVP F+R++S +YP C+ +VV EY +P EFDNLYLDMNGII
Sbjct: 44 VGVPSFYRWLSRKYPKCVKDVVEDRPQNIGGEY-VPVDISQPNPNKREFDNLYLDMNGII 102
Query: 41 HNCSHPNDN-DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRG 99
H SHP D P TE +F + Y++ + ++P+KL FMAIDGVAPRAKMNQQR
Sbjct: 103 HPASHPEDRPAPE---TEDDMFVAVLEYLDRVVACVRPRKLLFMAIDGVAPRAKMNQQRS 159
Query: 100 RRFRSAK 106
RRF+SAK
Sbjct: 160 RRFKSAK 166
>gi|71030174|ref|XP_764729.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351685|gb|EAN32446.1| hypothetical protein TP02_0165 [Theileria parva]
Length = 1726
Score = 204 bits (519), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 197/393 (50%), Gaps = 77/393 (19%)
Query: 29 FDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGV 88
FDNLYLD+NGI+HNCSH + E IF IF I + +++P+KL ++A+DGV
Sbjct: 104 FDNLYLDVNGIVHNCSHSVVDLCQNITCEDDIFVSIFQCIIKIVNIVRPRKLLYLAVDGV 163
Query: 89 APRAKMNQQRGRRFRSAKEAE---VLEQKAKEKGERL-PTEKRFDFITLKFCFPKKLFFM 144
APRAK+ QQR RRFR+A E+ ++ Q K L P+ C P +
Sbjct: 164 APRAKIIQQRERRFRAALESTQQLIISQSLKSTNTHLEPSLHNLQ------CEPDESV-- 215
Query: 145 AIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRL 204
Q ++ R E +FD ITPGT FM RL
Sbjct: 216 -----------------------------QCEPDESVRDKEEFKFDPIQITPGTAFMERL 246
Query: 205 HQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIR-------- 256
+L++F I ++ W+++ +++SG + PGEGEHKIM+YIR
Sbjct: 247 TVRLQFFALKMINENE---------QWRNLKIVVSGSDVPGEGEHKIMEYIRNNKAHRHS 297
Query: 257 ---YMKSKPDYNPN-------------MRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
+ +++ D N + HC+YGLDADLI+L L THEPY LLRE+V F
Sbjct: 298 QFHHPRTQLDNRNNTTQLDSVSGERNCVSHCVYGLDADLIVLSLATHEPYICLLREQVVF 357
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
N +++ + LLH+ ++R+YL + +++P + S P I+ ++DD+V +
Sbjct: 358 GHMKNSSKLRMMV-NMNSYILLHVGILREYLVTDL--VEDPRLRSDPSVIDRVVDDFVFL 414
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVL 393
+GNDF+P+L I +G ++Y+E L
Sbjct: 415 TMFVGNDFLPHLLMASIPDGGFNHTLQIYREYL 447
Score = 62.4 bits (150), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 572 LNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKK 631
L + + G P P++QL+ VLP S LP + L+T ++SP+ +YYP F D++
Sbjct: 754 LRITFVRGRPITPYEQLMLVLPPQSAHFLPSVFSKLITDQDSPLHQYYPLHFDVDMDNTN 813
Query: 632 QDWEAVVLIPFIDEVKLIKAMD 653
W + LIP + L++ M+
Sbjct: 814 VPWGGITLIPHVPYPLLLQHMN 835
Score = 53.9 bits (128), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 1022 GFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKD------HSSDDIYLRDDVFPHQ 1075
G+ + T+ Y+ + + LI+ Y ++FPE+F FL++ S D L ++ P+Q
Sbjct: 1451 GYDTELDPTEMVQYSAECIQLIQLYKEKFPELFDFLENTELTEKKSLDLAELYPNLTPNQ 1510
Query: 1076 GEQRVAQIVSWLKEQPHAKAEVRPCG-AAVVDAKVVSLIEHAVDTCEKVEK----QITLF 1130
+ QI+ + QP + ++ + +++ LIEH + + +E ++
Sbjct: 1511 SSYMLKQIMKFCDSQPFRRLKLTQGNYKCMTRSQIQLLIEHQNEYTKNLEPPNAVKLVRV 1570
Query: 1131 VKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDA 1189
L++P T + DP F L VV I VPLG +GTI+GI +T D
Sbjct: 1571 SHLKNLHVPAYTTTLVNFDPSLIF-LGQSVVYINHNEQVPLGTKGTIVGIYPNQTPQDT 1628
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 522 TNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF 569
T + D Y+ IQW L+YYY G SW+W+ P Y P+++DI F
Sbjct: 634 TVNTVEDVVREYLHGIQWILYYYYRGVPSWNWFLPCKYPPFVNDILTF 681
>gi|407040062|gb|EKE39962.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 666
Score = 203 bits (517), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 170/563 (30%), Positives = 260/563 (46%), Gaps = 92/563 (16%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+ F+ +DGV P AK+ QQR RR+ S L FDSNCITPG
Sbjct: 86 PRKMIFIGVDGVCPVAKIIQQRKRRYCSI----------------LNNTGGFDSNCITPG 129
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM ++ L ++ ++ D W + VILS + GEGEHKI ++IR
Sbjct: 130 TKFMEKIGIALHGYIVNRMDND---------LYWSGLKVILSDSKVAGEGEHKIYEFIRK 180
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE---VKFNTKSNKGGSQIVTP 314
K RHC+YG+D DLI+L L + ++LREE +K N K + G + T
Sbjct: 181 EIEKNKKFKEERHCIYGMDGDLIILTLGINITNMTILREEQEIIKKNNKCDICGKKHKTK 240
Query: 315 E---ETKFFLLHLSLMRDYLELEFGK---------LKEPGVLSFPFSIENIIDDWVLMGF 362
+ ETK + + + +R +L E K +E E II D++L+ F
Sbjct: 241 DHGKETKLIMCYPNELRKWLINEAKKNLIETKKEEGEEYKEEDIQIIEEEIIKDFILISF 300
Query: 363 LIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFD 422
L+GNDF+P +P + I G + +L K Y ++ Y+ KR L+K +
Sbjct: 301 LVGNDFLPRIPSIKIQTGGMEMLLKNYWKL------------YVKGKR----LSKGTEIN 344
Query: 423 FEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYA 482
+ F+E + I G++ S++ L +I+ T D +EV
Sbjct: 345 IKNFKELFKMI-------GEEESNI------------LKGIIQNTKKD-----KEV---K 377
Query: 483 NYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLH 542
Y++ Y D +E + N + G H +Y++ + E +++ Y I W +
Sbjct: 378 EYDQNIYFDSSKEIKLN---QEGYHDR---YYQIHFNTTNIEFIQNIVHHYFEGISWVFN 431
Query: 543 YYYNGCVSWSWYYPHHYAPYISDIKDFSHLN--LKYEMGEPFLPFQQLLAVLPAASKELL 600
YY N SW WYY HYAP+ D + + N + + P LP +QLLAVLP S L
Sbjct: 432 YYLNTLPSWRWYYKFHYAPFALDFALYLNENDSISFSSDTPILPLEQLLAVLPPHSFINL 491
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P + + SPIL Y+ F D+NG+ + ++ V L+P ID L + +EH L
Sbjct: 492 PSKLAHFVLSPTSPILHYFNTSFKIDINGENKLYKGVPLLPDIDINLLHSFVFNLEHSLP 551
Query: 661 DEERSRNRHGPM-LVYTYSNVNL 682
+ RN P ++Y N +L
Sbjct: 552 PSDLKRNLLLPFNILYVTKNSSL 574
Score = 67.4 bits (163), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 17/117 (14%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQI-------------PEFDNLYLDMNGIIHNCSHPN 47
MGVP F ++ R C V R Q E+DNLY+D NGIIH CSH
Sbjct: 1 MGVPSLFAWV--RQICPGYVKRLPQKIQGEEKREKNETGEEYDNLYIDFNGIIHQCSHSE 58
Query: 48 DNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
+ +E++I + IF ++ ++P+K+ F+ +DGV P AK+ QQR RR+ S
Sbjct: 59 KEEE--AASEEEIMERIFKAMDRYVNYVRPRKMIFIGVDGVCPVAKIIQQRKRRYCS 113
>gi|83317292|ref|XP_731098.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491026|gb|EAA22663.1| Drosophila melanogaster CG10354 gene product-related [Plasmodium
yoelii yoelii]
Length = 1286
Score = 203 bits (516), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 154/526 (29%), Positives = 232/526 (44%), Gaps = 165/526 (31%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE-------------------YQIPE------------- 28
MGVP F++++ RYP +++ V E Y++ +
Sbjct: 1 MGVPTFYKWLVTRYPKIAKAVYETRDNDVYIRRARINENGEFYKVCDLGAYVNNTDENHC 60
Query: 29 -------FDNLYLDMNGIIHNCSHPNDNDPHFRI-TEKQIFQDIFHYIEILFRMIQPKKL 80
FDN+YLDMNGIIH CSH D ++ T+++IF +IF YIE LF +I+P+KL
Sbjct: 61 SDNVNGYFDNMYLDMNGIIHLCSH---GDGSKKVKTDEEIFLNIFLYIERLFDIIEPQKL 117
Query: 81 FFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKK 140
+MAIDGVAP+AKMNQQR RRF+S +E+ +R E R F++ P +
Sbjct: 118 LYMAIDGVAPKAKMNQQRSRRFKSILASEI--------EKRAYIELRNKFLSENRNVPDE 169
Query: 141 LFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPF 200
+ + P G +F
Sbjct: 170 FHHWDSNIITP--------GTQF------------------------------------- 184
Query: 201 MCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKS 260
M L L+YF++ KIT D+ WK + ++ +VC GEGEHKI ++I+ ++
Sbjct: 185 MHELSVALKYFIEHKITNDEKWKKIVVIFSDANVC---------GEGEHKIYNFIKSQRA 235
Query: 261 KPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKS---------------N 305
+ Y+PN RH ++G+DADLIML L +HEPYF +LRE + + K
Sbjct: 236 QKGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIINLDPKEENKPQVKDKYVGVFKG 295
Query: 306 KGGSQIVTPEETKFFLLHLSLMRD-------------YLELEFGKLKEPGVLSFPFSIEN 352
KG Q TKF + S D Y + + + S + N
Sbjct: 296 KGDLQYC----TKFLRNNNSTTIDGNNNKGKKKYCNKYDDRNYANINISSTCSINYENWN 351
Query: 353 ---IIDDWVLMGFL-------------------------IGNDFIPNLPDLHIINGALPL 384
I+D +L +L GNDF+P+LP + I +G++
Sbjct: 352 ELQILDLSILREYLYKDFFFDTKYNLERCIDDFIFICFLCGNDFLPHLPSISIASGSIDQ 411
Query: 385 LYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
L +YQ+VLP L Y+ G +N + F KF++ +A + E F +Y
Sbjct: 412 LLLLYQKVLPVLGDYLINEGSMNFQSFIKFISFIAEVERETFVSQY 457
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 110/184 (59%), Gaps = 7/184 (3%)
Query: 508 KTDYYHYK--LDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISD 565
+T YY K LD + +E +++ YI + W L YY+ C W WYYP++YAP SD
Sbjct: 701 RTRYYKSKFHLDESDNVDEFVQEVVYKYIEGLAWVLCYYFQECPMWHWYYPYYYAPLSSD 760
Query: 566 --IKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEF 623
IKD +N+ +E EP LPF+QLL VLP+ S LP+ Y+ LM SPI+++YP+ F
Sbjct: 761 LLIKD---INISFEKDEPLLPFEQLLCVLPSNSSHCLPKMYRELMLKNESPIVDFYPKTF 817
Query: 624 ATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLG 683
+ NGKK ++ +VL+PF+++ ++I+ ++ LTDEE+ RNR G +Y S L
Sbjct: 818 KEEENGKKFKYQWIVLLPFVEKERIIRFARNLDDTLTDEEKKRNRRGLNKIYMSSTHTLS 877
Query: 684 TALA 687
+
Sbjct: 878 KKIT 881
>gi|395510147|ref|XP_003759342.1| PREDICTED: 5'-3' exoribonuclease 2-like, partial [Sarcophilus
harrisii]
Length = 273
Score = 202 bits (515), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/278 (40%), Positives = 156/278 (56%), Gaps = 41/278 (14%)
Query: 183 LPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILS 239
LP E+ RFDSNCITPGT FM L + LRY++ ++ D WK++ VILS
Sbjct: 3 LPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP---------GWKNLTVILS 53
Query: 240 GHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK 299
PGEGEHKIMDYIR +++P+++PN HCL G DADLIMLGL THEP F+++REE K
Sbjct: 54 DASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFK 113
Query: 300 FNTK-----SNKGGSQI--------------------VTPEETKFFLLHLSLMRDYLELE 334
N N+ G ++ + E +F + L+++R+YLE E
Sbjct: 114 PNKPKPCGLCNQLGHEVKDCQGLPREKQGEHDQFEESLPASEGEFIYIRLNVLREYLERE 173
Query: 335 FGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLP 394
P F F IE IDDWV M F +GNDF+P+LP L I GA+ L +Y+ V+
Sbjct: 174 LTMASLP----FTFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVH 229
Query: 395 TLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
GY+ E GY+NL+R + + + + F+++ D
Sbjct: 230 KTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 267
>gi|345487550|ref|XP_001601647.2| PREDICTED: 5'-3' exoribonuclease 2 homolog [Nasonia vitripennis]
Length = 828
Score = 202 bits (514), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 155/275 (56%), Gaps = 37/275 (13%)
Query: 179 KGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDV 234
KG LP EK FDSNCITPGTPFM RL L Y++ ++ D WK++
Sbjct: 11 KGAFLPPEKPKEDHFDSNCITPGTPFMARLSACLHYYIHDRLNNDP---------GWKNI 61
Query: 235 CVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLL 294
VILS PGEGEHKIMDYIR +++PD++PN +H L G DADLIMLGL THEP F+++
Sbjct: 62 KVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIMLGLATHEPNFTII 121
Query: 295 REEVKFN--------------------TKSNKGGSQIVTPEETKFFLLHLSLMRDYLELE 334
REE K N + NK + + E +F + L+++R+YLE E
Sbjct: 122 REEFKPNKPRPCDICGQLGHDMQDCLGAEPNKKEEEKIFGSECQFIFVRLNVLREYLERE 181
Query: 335 FGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLP 394
L+ P L F + E IDDWV M F +GNDF+P+LP L I A+ L +Y++ +
Sbjct: 182 ---LQMPN-LPFKYDFERAIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVTLYKKTVY 237
Query: 395 TLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
G++ G +NL R + L L + + E F+++
Sbjct: 238 KTGGFLTNSGDVNLDRVQLILNDLGNVEDEIFKKR 272
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 113/212 (53%), Gaps = 8/212 (3%)
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
DE W F K YY K D + A Y+R + W L YYY GC S
Sbjct: 386 DEVRLWEDGF-------KDRYYESKFDVLPDNLAFRNNVALQYVRGLCWVLRYYYQGCAS 438
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGE-PFLPFQQLLAVLPAASKELLPEPYQNLMT 609
W WY+P+HYAP+ SD + L+ ++E G PF P +QL+ V PAAS + +P P+ LM
Sbjct: 439 WKWYFPYHYAPFASDFINIGGLSTEFERGTIPFRPLEQLMGVFPAASCKHVPAPWATLMK 498
Query: 610 LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRH 669
SPI+++YPE+F DLNGKK W+ V L+PF+DE +L KA++ LT E+ RN
Sbjct: 499 DSTSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLFKALEPYYGQLTVAEKKRNVR 558
Query: 670 GPMLVYTYSNVNLGTALAPDYFPAINENHAVE 701
G +Y + + T L Y I + VE
Sbjct: 559 GDDRLYVGPDNSGFTFLKGLYENKIGYDQEVE 590
>gi|401828471|ref|XP_003887949.1| 5'-3' exonuclease [Encephalitozoon hellem ATCC 50504]
gi|392998957|gb|AFM98968.1| 5'-3' exonuclease [Encephalitozoon hellem ATCC 50504]
Length = 656
Score = 202 bits (514), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 165/604 (27%), Positives = 268/604 (44%), Gaps = 133/604 (22%)
Query: 129 DFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSA---KEAEVLE------------ 173
D+I LK P+KL ++AIDGVAPRAK++ QR RR++SA KE ++
Sbjct: 65 DYILLK-VRPRKLLYIAIDGVAPRAKLSHQRARRYKSALGKKEGSAIKPTLQTDFAVQPP 123
Query: 174 QKAKEKGE------------RLPTE--------------KRFDSNCITPGTPFMCRLHQQ 207
++ K++GE + E ++FD NCITPGTPFM RLH
Sbjct: 124 KEGKDEGEDGEFTGESSLYDKFTAEDISESSSLAVDVEAEKFDLNCITPGTPFMERLHSV 183
Query: 208 LRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPN 267
L +++ K+++D + +I S + PGEGE KIM +IR +S N
Sbjct: 184 LISYIQYKLSSDP---------GASHLRIIYSSYLVPGEGEQKIMSFIRNQESAAR---N 231
Query: 268 MRHCLYGLDADLIMLGLCTHEPYFSLLR--------EEVKFNTKSNKGG---SQIVTPEE 316
H +Y D DL+ LGL H ++R ++ K TK + G +
Sbjct: 232 DVHMIYSPDGDLMFLGLSLHRSKVLIMRDYFSPNRAQKKKVCTKCGRTGHSNEECGVFTN 291
Query: 317 TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLH 376
F +++S +R L EF + FS E I++DW+ + FL+GNDF+P++P L
Sbjct: 292 YHFVYVNISELRTRLIREFRRYTAQR-----FSEERILNDWIFLCFLLGNDFVPSIPCLD 346
Query: 377 IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYL 436
I ++ + ++ + N + ++T ++ D++ + Y +
Sbjct: 347 IRFHSIETITEIMMK---------------NFSETKSYITCNSAIDYQVLKNFYTILASK 391
Query: 437 EGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEW 496
E D + KS+ +D L + Y+
Sbjct: 392 E--------DSLYYRKSQSLDRFREELKDMPNITYE------------------------ 419
Query: 497 RTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYP 556
+ ++ G K YY KL+ + T +R Y++ + W YY G W WYYP
Sbjct: 420 KIPIHTKTG--KIQYYASKLNAS--TESEIRSVCYEYVKGLYWVYSYYILGSTGWDWYYP 475
Query: 557 HHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPIL 616
+H+AP +D+ S ++ G P P +QLLAVLP SK ++P+ Q PI
Sbjct: 476 YHFAPLAADLSKLSISEIRINPGLPLRPLEQLLAVLPPMSKSMVPKALQ--------PIF 527
Query: 617 ----EYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPM 672
++YPE+ TD+ K W+ VV++PF+D ++ + + L E+ +RN
Sbjct: 528 NEYKDFYPEDVKTDMFDKVFLWQEVVILPFVDFRSILSENASKFNSLEYEDLNRNLRSLD 587
Query: 673 LVYT 676
L +T
Sbjct: 588 LFFT 591
Score = 167 bits (424), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 212/461 (45%), Gaps = 76/461 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE-YQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MGVP FR++ + E + + P D LYLD N IIH C P EK
Sbjct: 1 MGVPSLFRWLQLSH---REAIHNILENPSVDCLYLDFNAIIHTCIKPGLGSEE--EIEKD 55
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+++ + +I+ + ++P+KL ++AIDGVAPRAK++ QR RR++SA K++G
Sbjct: 56 LYKTVGDFIDYILLKVRPRKLLYIAIDGVAPRAKLSHQRARRYKSA--------LGKKEG 107
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE- 178
+ + DF V P K + G E+ + ++ E
Sbjct: 108 SAIKPTLQTDF-----------------AVQP-PKEGKDEGEDGEFTGESSLYDKFTAED 149
Query: 179 --KGERLPTE---KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKD 233
+ L + ++FD NCITPGTPFM RLH L +++ K+++D
Sbjct: 150 ISESSSLAVDVEAEKFDLNCITPGTPFMERLHSVLISYIQYKLSSDP---------GASH 200
Query: 234 VCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSL 293
+ +I S + PGEGE KIM +IR +S N H +Y D DL+ LGL H +
Sbjct: 201 LRIIYSSYLVPGEGEQKIMSFIRNQESAAR---NDVHMIYSPDGDLMFLGLSLHRSKVLI 257
Query: 294 LR--------EEVKFNTKSNKGG---SQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPG 342
+R ++ K TK + G + F +++S +R L EF +
Sbjct: 258 MRDYFSPNRAQKKKVCTKCGRTGHSNEECGVFTNYHFVYVNISELRTRLIREFRRYTAQR 317
Query: 343 VLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINE 402
FS E I++DW+ + FL+GNDF+P++P L I ++ + ++ + YI
Sbjct: 318 -----FSEERILNDWIFLCFLLGNDFVPSIPCLDIRFHSIETITEIMMKNFSETKSYITC 372
Query: 403 GGYLNLKRFEKFLTKLASFD----------FEQFREKYADI 433
++ + + F T LAS + ++FRE+ D+
Sbjct: 373 NSAIDYQVLKNFYTILASKEDSLYYRKSQSLDRFREELKDM 413
>gi|327408309|emb|CCA30120.1| GF20490, related [Neospora caninum Liverpool]
Length = 1253
Score = 202 bits (513), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 177/350 (50%), Gaps = 80/350 (22%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-------EVLEQKAKEKGERLPTEK-RF 189
P+KL ++AIDGVAPRAKMNQQR RRF++AK+ E L+ + + +G +P +K R+
Sbjct: 123 PRKLLYLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYEELKAQFESEGREVPPKKIRW 182
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSN ITPGTPFM RL + Y+++ ++ T W+ + VI S PGEGEH
Sbjct: 183 DSNVITPGTPFMHRLAIAITYYIQDRLATRS---------SWQGLKVIFSDATVPGEGEH 233
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV------KFNTK 303
KIMD+IR + ++ PN+RH L+G DADLIMLGL THE FS+LRE V + +
Sbjct: 234 KIMDFIRQQRKSGEFRPNLRHVLHGADADLIMLGLATHEANFSILREAVVDRTPEQVCST 293
Query: 304 SNKGGSQI-------------VTPEETKFF------------------------------ 320
N G TPEE + F
Sbjct: 294 CNAVGHSAENCKGGFAAGAPAATPEEERAFQVLEQDKRGLKRHLEERGVELREDWAAGLE 353
Query: 321 ----------LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
+L L ++R+YL EF + G + +E IDD+V + FL GNDF+P
Sbjct: 354 SHRRAWKPLQMLQLPVLREYLTYEFITQQAEG---HSYDLERCIDDFVFLCFLCGNDFLP 410
Query: 371 NLPDLHIINGALPLLYKVYQEVLP-TLDGYINEGGYLNLKRFEKFLTKLA 419
+LP I G++ L +Y + P L Y+ G +NL++ FL LA
Sbjct: 411 HLPHQSIQRGSIDALVHLYLHLRPQVLTDYLTHEGRVNLRQLYTFLHHLA 460
Score = 115 bits (288), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 91/200 (45%), Gaps = 43/200 (21%)
Query: 528 DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLK------------ 575
D A YI +QW L YYY GC S+ W++P HYAP D+ D LK
Sbjct: 693 DVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAPLAVDLADELQRRLKLDASKEETQRRD 752
Query: 576 ----------------------------YEMGEPFLPFQQLLAVLPAASKELLPEPYQNL 607
+ +G PF F+QL+AVLP S LP + +
Sbjct: 753 SSIGNARAAHSLKCTTSRGVSIEGKQISFTLGMPFRAFEQLMAVLPPYSASCLPREHAAV 812
Query: 608 MTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
MT S I ++YP + D N W+ VVL+PFIDE +L++ +E LT EER RN
Sbjct: 813 MTNPRSAIADFYPADVKMDPN---HQWQWVVLLPFIDENRLLRVCKPLEQFLTLEERERN 869
Query: 668 RHGPMLVYTYSNVNLGTALA 687
R G ++ + + L LA
Sbjct: 870 RRGSDRLFVHRSHPLAETLA 889
Score = 102 bits (255), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 88/175 (50%), Gaps = 50/175 (28%)
Query: 1 MGVPKFFRYISERYPC------------LSEVVREYQIPE-------------------- 28
MGVP F+R++ RYP + E +R+ + E
Sbjct: 1 MGVPTFYRWLCSRYPRVVIDVGDNHVQDMREEIRQKRERERARQETKENEETSDRSAPAA 60
Query: 29 ----------------FDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILF 72
+D LYLDMNGIIH C H +D TE+++F IF Y++ +
Sbjct: 61 ENAEKTDQPDLEEEFGYDCLYLDMNGIIHPCCHTDDGS--CPATEEEMFLSIFQYVDRIV 118
Query: 73 RMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKR 127
+IQP+KL ++AIDGVAPRAKMNQQR RRF++AK+ + E+ +E + +E R
Sbjct: 119 DIIQPRKLLYLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYEELKAQFESEGR 173
>gi|449703901|gb|EMD44256.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 670
Score = 202 bits (513), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 171/563 (30%), Positives = 260/563 (46%), Gaps = 92/563 (16%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+ F+ +DGV P AK+ QQR RR+ S L FDSNCITPG
Sbjct: 86 PRKMIFIGVDGVCPVAKIIQQRKRRYCSV----------------LNNTGGFDSNCITPG 129
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM ++ L ++ ++ D W + VILS + GEGEHKI ++IR
Sbjct: 130 TKFMEKIGIALHGYIVNRMDND---------LYWSGLKVILSDSKVAGEGEHKIYEFIRK 180
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE---VKFNTKSNKGGSQIVTP 314
K + RHC+YG+D DLI+L L + ++LREE +K N K + G + T
Sbjct: 181 EIKKNERFKEERHCIYGMDGDLIILTLGINIRNMTILREEQEIIKKNNKCDICGKKHKTK 240
Query: 315 E---ETKFFLLHLSLMRDYLELEFGK---------LKEPGVLSFPFSIENIIDDWVLMGF 362
+ ETK + + + +R +L E K +E E II D++L+ F
Sbjct: 241 DHGKETKLIMCYPNELRKWLINEAKKNLIETKKEEGEEYKEEDIEIIEEEIIKDFILISF 300
Query: 363 LIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFD 422
L+GNDF+P +P + I G + +L K Y ++ Y+ KR L+K +
Sbjct: 301 LVGNDFLPRIPSIKIQTGGMEMLLKNYWKL------------YVKGKR----LSKGTEIN 344
Query: 423 FEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYA 482
F+E + I G++ S++ L +I+ T D +EV
Sbjct: 345 ITNFKELFKMI-------GEEESNI------------LKGIIQNTKKD-----KEV---K 377
Query: 483 NYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLH 542
Y++ Y D +E + N + G H +Y++ + E +++ Y I W +
Sbjct: 378 EYDQNIYFDSSKEIKLN---KEGYHDR---YYQIHFNTTNIEFIQNIVHHYFEGISWIFN 431
Query: 543 YYYNGCVSWSWYYPHHYAPYISDIKDFSHLN--LKYEMGEPFLPFQQLLAVLPAASKELL 600
YY N SW WYY HYAP+ D + + N + + P LP +QLLAVLP S L
Sbjct: 432 YYLNTLPSWRWYYKFHYAPFALDFALYLNENDSISFSSDTPILPLEQLLAVLPPQSFINL 491
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P + + SPIL Y+ F D+NG+ + ++ V L+P ID L + +EH L
Sbjct: 492 PSKLAHFVLSPTSPILHYFNTSFKIDINGENKLYKGVPLLPDIDINLLHSFVFNLEHSLP 551
Query: 661 DEERSRNRHGPM-LVYTYSNVNL 682
E RN P ++Y N +L
Sbjct: 552 PSELKRNILLPFNILYVTKNSSL 574
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 13/116 (11%)
Query: 1 MGVPKFFRYISERYPCL---------SEVVREYQ--IPEFDNLYLDMNGIIHNCSHPNDN 49
MGVP F ++ + P E RE E+DNLY+D NGIIH CSH
Sbjct: 1 MGVPSLFAWVRQICPGYVKRLPPKIQGEEKREKNEIGEEYDNLYIDFNGIIHQCSHSEKE 60
Query: 50 DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 105
+ +E++I + IF ++ ++P+K+ F+ +DGV P AK+ QQR RR+ S
Sbjct: 61 EE--ATSEEEIMERIFKAMDRYVNYVRPRKMIFIGVDGVCPVAKIIQQRKRRYCSV 114
>gi|67480967|ref|XP_655833.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56472997|gb|EAL50447.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 666
Score = 202 bits (513), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 171/563 (30%), Positives = 260/563 (46%), Gaps = 92/563 (16%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+ F+ +DGV P AK+ QQR RR+ S L FDSNCITPG
Sbjct: 86 PRKMIFIGVDGVCPVAKIIQQRKRRYCSV----------------LNNTGGFDSNCITPG 129
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM ++ L ++ ++ D W + VILS + GEGEHKI ++IR
Sbjct: 130 TKFMEKIGIALHGYIVNRMDND---------LYWSGLKVILSDSKVAGEGEHKIYEFIRK 180
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE---VKFNTKSNKGGSQIVTP 314
K + RHC+YG+D DLI+L L + ++LREE +K N K + G + T
Sbjct: 181 EIKKNERFKEERHCIYGMDGDLIILTLGINIRNMTILREEQEIIKKNNKCDICGKKHKTK 240
Query: 315 E---ETKFFLLHLSLMRDYLELEFGK---------LKEPGVLSFPFSIENIIDDWVLMGF 362
+ ETK + + + +R +L E K +E E II D++L+ F
Sbjct: 241 DHGKETKLIMCYPNELRKWLINEAKKNLIETKKEEGEEYKEEDIEIIEEEIIKDFILISF 300
Query: 363 LIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFD 422
L+GNDF+P +P + I G + +L K Y ++ Y+ KR L+K +
Sbjct: 301 LVGNDFLPRIPSIKIQTGGMEMLLKNYWKL------------YVKGKR----LSKGTEIN 344
Query: 423 FEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYA 482
F+E + I G++ S++ L +I+ T D +EV
Sbjct: 345 ITNFKELFKMI-------GEEESNI------------LKGIIQNTKKD-----KEV---K 377
Query: 483 NYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLH 542
Y++ Y D +E + N + G H +Y++ + E +++ Y I W +
Sbjct: 378 EYDQNIYFDSSKEIKLN---KEGYHDR---YYQIHFNTTNIEFIQNIVHHYFEGISWIFN 431
Query: 543 YYYNGCVSWSWYYPHHYAPYISDIKDFSHLN--LKYEMGEPFLPFQQLLAVLPAASKELL 600
YY N SW WYY HYAP+ D + + N + + P LP +QLLAVLP S L
Sbjct: 432 YYLNTLPSWRWYYKFHYAPFALDFALYLNENDSISFSSDTPILPLEQLLAVLPPQSFINL 491
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P + + SPIL Y+ F D+NG+ + ++ V L+P ID L + +EH L
Sbjct: 492 PSKLAHFVLSPTSPILHYFNTSFKIDINGENKLYKGVPLLPDIDINLLHSFVFNLEHSLP 551
Query: 661 DEERSRNRHGPM-LVYTYSNVNL 682
E RN P ++Y N +L
Sbjct: 552 PSELKRNILLPFNILYVTKNSSL 574
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 13/116 (11%)
Query: 1 MGVPKFFRYISERYPCL---------SEVVREYQ--IPEFDNLYLDMNGIIHNCSHPNDN 49
MGVP F ++ + P E RE E+DNLY+D NGIIH CSH
Sbjct: 1 MGVPSLFAWVRQICPGYVKRLPPKIQGEEKREKNEIGEEYDNLYIDFNGIIHQCSHSEKE 60
Query: 50 DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 105
+ +E++I + IF ++ ++P+K+ F+ +DGV P AK+ QQR RR+ S
Sbjct: 61 EE--ATSEEEIMERIFKAMDRYVNYVRPRKMIFIGVDGVCPVAKIIQQRKRRYCSV 114
>gi|291236957|ref|XP_002738405.1| PREDICTED: C. briggsae CBR-XRN-2 protein-like [Saccoglossus
kowalevskii]
Length = 1810
Score = 201 bits (512), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 158/564 (28%), Positives = 244/564 (43%), Gaps = 172/564 (30%)
Query: 112 EQKAKEKGERLPT--EKRFDFIT------LKFCFPKKLFFMAIDGVAPRAKMNQQRGRRF 163
E+ ++ G LP E++F+ ++ ++ PKK+ F+A++GV P AK N +R ++F
Sbjct: 1039 ERNKEDDGWPLPISEEEKFEGMSKFIDTLMEIVRPKKMLFIAMEGVTPFAKNNNRRQKKF 1098
Query: 164 RSAK-----EAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITT 218
+ K EA + + A E G FD N + PGT FM RLH LR ++ +I T
Sbjct: 1099 LNYKKDREAEAGIERRSADEFG--------FDYNSLCPGTDFMSRLHVHLRAYIADRIRT 1150
Query: 219 DKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDAD 278
W + VILS PGEGEHKIM+ IR +
Sbjct: 1151 QPRWVG---------IKVILSDASVPGEGEHKIMEIIRSQRGH----------------- 1184
Query: 279 LIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKL 338
++ C + P R+E ++V +E K +HL ++R
Sbjct: 1185 --IVRDCENAP-----RQE-----------REVV--QEEKLIFVHLKVLR---------- 1214
Query: 339 KEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY--------- 389
+ IDDWV + L+GNDF+P LP L+I GAL L ++Y
Sbjct: 1215 ------------KRTIDDWVFLCCLLGNDFLPKLPSLNIKEGALDRLVRMYKTAVTHTMI 1262
Query: 390 -------QEVLPTLDG-------------YINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
+E+ LDG Y+ + G +NL + LT+L
Sbjct: 1263 NDLKSKIRELSLALDGKSEEIDPDDGDKRYLTDNGIVNLHMLQMILTEL----------- 1311
Query: 430 YADIQYLEGKMGKKFSDVFHKEKSK-EMDPDLAALIKATDDDYDDGTEEVLNYANYEEYY 488
GK+ +F + + K EM+ I+ +D
Sbjct: 1312 -----------GKEEDVIFRERRQKNEMNSKYKCEIQHESED------------------ 1342
Query: 489 YSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTN-EVLRDQAECYIRAIQWNLHYYYNG 547
N K YY YK D + E + + A+ Y++ + W YY++G
Sbjct: 1343 ----------NVRLGMDGWKDRYYEYKFDVSPSHEPEFINNLADSYVKGLCWISMYYFHG 1392
Query: 548 CVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNL 607
C SW W+YP+HYAP+ D K+ +HL +E+GEP P +QL+A+LP ++ LLP ++ L
Sbjct: 1393 CPSWQWFYPYHYAPFAMDFKNITHLQNDFEVGEPLKPLEQLMAILPPSNDHLLPITWRPL 1452
Query: 608 MTLE--NSPILEYYPEEFATDLNG 629
M E +SPI ++YP +F DL+G
Sbjct: 1453 MIGEPGDSPIRDFYPGDFEIDLSG 1476
Score = 152 bits (384), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 137/282 (48%), Gaps = 38/282 (13%)
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAE--------V 171
E+ +F + ++ PKK+ ++A+DGV P AK N +R RRF S KE +
Sbjct: 47 EKFEGMSKFIDMLMEIVRPKKMLYIAVDGVTPFAKNNSRRSRRFLSDKEERMSDTELDLI 106
Query: 172 LEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVW 231
+K + E E F+ N I PGT FM RLH L ++ KI T W
Sbjct: 107 WHEKGFSESESSADELEFNRNLICPGTKFMSRLHVHLHEYIANKINTQP---------SW 157
Query: 232 KDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYF 291
+ VILS PGEGEHKIM+ +R K+ P ++ N RHC+Y D GL THEP
Sbjct: 158 VGIKVILSDATVPGEGEHKIMEIVRRQKATPTHDINSRHCIYSND------GLATHEPNL 211
Query: 292 SLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIE 351
S++R+E+ + FF+ L + + + G+ S +I
Sbjct: 212 SIIRKEIPL--------GDWCKDKVPYFFITKLQCLEKEMYV-------AGLGSGVHNIN 256
Query: 352 NIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVL 393
IDDWV + L+GNDF+P LP L+I AL L ++Y+ +
Sbjct: 257 RTIDDWVFLCCLLGNDFLPKLPSLNINEKALDRLIRMYKTAV 298
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 97/148 (65%), Gaps = 4/148 (2%)
Query: 530 AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLL 589
A Y++ + W YYY+GC SW W+YP+HYAP+ D + ++L +E+GEP P +QL+
Sbjct: 321 ANSYVKGLCWISMYYYHGCPSWQWFYPYHYAPFAMDFINITNLQNDFEVGEPLKPLEQLM 380
Query: 590 AVLPAASKELLPEPYQNLMT--LENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVK 647
A+L ++ LLP ++ LMT L +SPI ++YP++F TDLNG+K V IPF+DE +
Sbjct: 381 AILTPSNDHLLPTTWRPLMTDELGDSPISDFYPDDFETDLNGEKYTSRGVARIPFVDETR 440
Query: 648 LIKAMDAVEHLLTDEERSRNRHGPMLVY 675
L +A++ + HL DEE RNR G V+
Sbjct: 441 LKEALEGL-HLTRDEE-CRNRFGHNAVF 466
Score = 47.4 bits (111), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 55 ITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF---RSAKEAEV 110
I+E++ F+ + +I+ L +++PKK+ F+A++GV P AK N +R ++F + +EAE
Sbjct: 1051 ISEEEKFEGMSKFIDTLMEIVRPKKMLFIAMEGVTPFAKNNNRRQKKFLNYKKDREAEA 1109
>gi|71415930|ref|XP_810014.1| 5'-3' exonuclease XRNA [Trypanosoma cruzi strain CL Brener]
gi|70874484|gb|EAN88163.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 266
Score = 201 bits (511), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 123/178 (69%), Gaps = 15/178 (8%)
Query: 125 EKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLP 184
EK F+ I P+K FF+A+DGVAPRAKMNQQR RR+RS E V Q+A +GE +P
Sbjct: 69 EKLFNVIQ-----PRKYFFLAVDGVAPRAKMNQQRQRRYRSGYELMVARQEAIAQGEEVP 123
Query: 185 TEKR-FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHET 243
EK FDSNCITPGT FM R+ +Q +YF+ +KI TD W++ V+ SGH+
Sbjct: 124 DEKDVFDSNCITPGTNFMVRVSEQFQYFITMKIATDP---------AWQNCQVVYSGHDN 174
Query: 244 PGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFN 301
PGEGEHKI+D+IR K +P Y+PN HC+YGLDADL+ML L THEP+F LLRE V F
Sbjct: 175 PGEGEHKIVDFIRRRKMQPGYSPNETHCMYGLDADLVMLSLATHEPHFLLLREVVTFG 232
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/127 (56%), Positives = 91/127 (71%), Gaps = 2/127 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEKQ 59
MGVPKFFR+++ER P + R+ P DNLYLDMNGIIHNC+H ND D + TEK
Sbjct: 1 MGVPKFFRWVAERCPTVITPFRD-SPPPVDNLYLDMNGIIHNCTHTNDVDATQKSPTEKA 59
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ + +F Y+E LF +IQP+K FF+A+DGVAPRAKMNQQR RR+RS E V Q+A +G
Sbjct: 60 MMEAMFAYLEKLFNVIQPRKYFFLAVDGVAPRAKMNQQRQRRYRSGYELMVARQEAIAQG 119
Query: 120 ERLPTEK 126
E +P EK
Sbjct: 120 EEVPDEK 126
>gi|269861191|ref|XP_002650309.1| 5'-3' exonuclease [Enterocytozoon bieneusi H348]
gi|220066257|gb|EED43747.1| 5'-3' exonuclease [Enterocytozoon bieneusi H348]
Length = 623
Score = 201 bits (510), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 175/589 (29%), Positives = 269/589 (45%), Gaps = 125/589 (21%)
Query: 133 LKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA---EVLEQKAKEKGERLPTEKRF 189
+ +C PKKL ++AIDGVAP+AKMNQQR RRFR AKE ++ EK + E F
Sbjct: 50 IAYCKPKKLIYIAIDGVAPKAKMNQQRTRRFRGAKEVYENNIVYLDEHEKYDNPYLEVAF 109
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
D N ITPGT FM +L + + ++ K++TD LW + VI S ++ PGEGE
Sbjct: 110 DHNAITPGTIFMEQLDEFISNLIQFKLSTDPLWANK---------TVIYSNYKVPGEGEQ 160
Query: 250 KIMDYIRYMKSKPDYNPNMR--HCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKG 307
KIM+Y+R K N+R H +Y DADLI LGL ++REEVK+ K
Sbjct: 161 KIMEYLRIHKK------NLRESHVIYSPDADLIFLGLTLPNYNIRIMREEVKY-----KE 209
Query: 308 GSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGV------LSFPFSIENIIDDWVLMG 361
++I P++ + H L+ + KLK + L F+ E ++ D++ +
Sbjct: 210 DTEI--PKDRNYLDNHFVLINE------NKLKNLIIDQLKTGLEDNFNGERLLFDFIFLC 261
Query: 362 FLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINE-GGYLNLKRFEKFLTKLAS 420
F IGNDF+P+ P I A+ + + YI + GG +N K ++F +
Sbjct: 262 FTIGNDFLPSAPCFEIRTNAVEKIAEFLIRAYKRSRTYITDFGGIVNFKALKEFFIECEK 321
Query: 421 FDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLN 480
+ +EK ++Q +M +F++ D +++ EE
Sbjct: 322 DENINLKEKRINLQKSRNRMDLEFNE---------------------DVEFEICEEE--- 357
Query: 481 YANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWN 540
K YY K+D + E L + YI+ + W
Sbjct: 358 --------------------------GKLKYYIEKMDIN--SEEKLMIACKEYIKGMVWI 389
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
YY+ C SW +YYP+++AP++ D+ NL + +P PF+QLL VLPA S LL
Sbjct: 390 YQYYFFNCPSWDYYYPYYFAPFMFDLMALEVENLYFTPSKPLKPFEQLLCVLPALSMHLL 449
Query: 601 PEPYQ-----NLMT--------LENSPILEY-------------------YPE-EFATDL 627
PEPY+ N M +N I EY +P+ F D
Sbjct: 450 PEPYRKYYYDNKMIKLLVPGELTKNGYIKEYNSIYKTNNNENYNLKDIFEFPDLNFKIDS 509
Query: 628 NGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
K +W+ +IPF++ +++ ++ LT EE +RN G +++T
Sbjct: 510 FHKIMNWQYTAIIPFVNNKNILEYSRKYQNSLTYEEINRNIIGFPVLFT 558
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 10/83 (12%)
Query: 30 DNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFH----YIEILFRMIQPKKLFFMAI 85
DNLYLD N IIH C++ D ++ +D++H Y++ L +PKKL ++AI
Sbjct: 10 DNLYLDFNAIIHPCTNRELKDL------DKLNEDLYHNLEAYLDALIAYCKPKKLIYIAI 63
Query: 86 DGVAPRAKMNQQRGRRFRSAKEA 108
DGVAP+AKMNQQR RRFR AKE
Sbjct: 64 DGVAPKAKMNQQRTRRFRGAKEV 86
>gi|389582934|dbj|GAB65670.1| exoribonuclease [Plasmodium cynomolgi strain B]
Length = 1327
Score = 200 bits (509), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 154/538 (28%), Positives = 241/538 (44%), Gaps = 132/538 (24%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSH-------PNDNDPHF 53
MGVP F+R++ RYP +++ E + + + HN P+ +D
Sbjct: 1 MGVPTFYRWLVTRYPKIAKATYETRDSDVYARRTKIRDGHHNGEKKKDTYRVPDLSDYVN 60
Query: 54 RITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQ 113
E +I Y + L+ + ++G+ + RR +S +E +
Sbjct: 61 NTDENHCSDNINGYYDNLY----------LDMNGIIHLCS-HSDNSRRAKSNEEIFL--- 106
Query: 114 KAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLE 173
L E+ FD I PKKL +MAIDGVAP+AKMNQQR RRF+S +E+
Sbjct: 107 -----NIFLYIERLFDIIE-----PKKLLYMAIDGVAPKAKMNQQRSRRFKSILCSEIER 156
Query: 174 QKAKEKGERLPTEKR--------FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
E E+ +E R +DSN ITPGT FM L L+YFV+ KIT D+
Sbjct: 157 NAYIELREKFLSENRTVPEELTFWDSNIITPGTQFMYELSVALKYFVEHKITNDE----- 211
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
WK++ VI S +S+P Y+PN RH ++G+DADLIML L
Sbjct: 212 ----KWKNIVVIFSDAN----------------RSQPGYDPNTRHVIHGMDADLIMLSLA 251
Query: 286 THEPYFSLLREEVKFNTKS----------------------------------------- 304
+HEPYF +LRE + ++K
Sbjct: 252 SHEPYFYILREIIILDSKGEEKVQNKDFVGVLKSKQDLPLCTTHIRKTKKMYTKYNDPHY 311
Query: 305 ---NKGGSQIVTPEE-TKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
N+ + ++ E + +L L+++R+YL +F +++E IDD++ +
Sbjct: 312 ANINRSHNCMINSENWNELQILDLTILREYLSKDF-------FFDSTYNLERCIDDFIFI 364
Query: 361 GFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLAS 420
FL GNDF+P+LP + I G++ L +YQ+VLP L Y+ G +NLK F K+++ +A
Sbjct: 365 CFLCGNDFLPHLPSISIAAGSIDQLVLLYQKVLPVLGDYLINEGKINLKPFSKYVSFIAE 424
Query: 421 FDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEV 478
+ E F +Y D K + ++ D +K TD+ +DG+ +
Sbjct: 425 VERETFISQY---------------DFKKKREKRDQQKDSLKRVKCTDEQ-NDGSGNI 466
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 99/162 (61%), Gaps = 1/162 (0%)
Query: 514 YKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLN 573
+ LD + ++ +++ YI + W L YY+ C W WYYP++YAP SD+ ++N
Sbjct: 707 FHLDESDHVDDFVKEVVYKYIEGLSWVLLYYFQSCPMWHWYYPYYYAPLSSDLI-IDNVN 765
Query: 574 LKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQD 633
+ EP LP +QLL VLP+ S LP+ YQ LM +SPI+++YP+ F + NGKK
Sbjct: 766 FIFHKDEPILPLEQLLCVLPSNSSHCLPKSYQELMVRYDSPIIDFYPKTFKEEENGKKYK 825
Query: 634 WEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
++ V+L+PF+D+ ++IK + LT+EER RNR G +Y
Sbjct: 826 YQWVILLPFVDKERIIKHARELNDTLTEEERKRNRRGMNKIY 867
>gi|303390661|ref|XP_003073561.1| 5-3 exoribonuclease [Encephalitozoon intestinalis ATCC 50506]
gi|303302708|gb|ADM12201.1| 5-3 exoribonuclease [Encephalitozoon intestinalis ATCC 50506]
Length = 656
Score = 199 bits (507), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 189/703 (26%), Positives = 300/703 (42%), Gaps = 139/703 (19%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FR++ + + E P D LYLD N IIH C P E+ +
Sbjct: 1 MGVPSLFRWLQLSHREAVHSIMEK--PSVDCLYLDFNAIIHTCIKPGLGSEE--EIERDL 56
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA-KEKG 119
++ + +I+ + +P+KL ++AIDGVAPRAK++ QR RR++SA + E KA G
Sbjct: 57 YKTVGDFIDYILLRTRPRKLLYIAIDGVAPRAKLSHQRARRYKSALGKK--EGKAPVSTG 114
Query: 120 ERLPT-----EKRFDFITLKFCFPKKLF--FMAIDGVAPRAKMNQQRGRRFRSAKEAEVL 172
+ PT EK + ++F L+ F+A D S + +
Sbjct: 115 KTDPTASSISEKTEEATDVEFTGESSLYDKFIAED----------------LSESSSLAM 158
Query: 173 EQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWK 232
+ +A ++FD NCITPGTPFM RLH L +++ K++ D
Sbjct: 159 DVEA----------EKFDLNCITPGTPFMERLHNVLISYIQYKLSKDP---------EVS 199
Query: 233 DVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFS 292
+ +I S + PGEGE KIM +IR ++ N H +Y D DLI LGL ++
Sbjct: 200 HLRIIYSSYLVPGEGEQKIMSFIR---NQIPAAKNDVHMIYSPDGDLIFLGLSLYKSRVL 256
Query: 293 LLRE--------EVKFNTKSNKGG---SQIVTPEETKFFLLHLSLMRDYLELEFGKLKEP 341
++R+ + K TK + G + + F ++++ +R L EF K
Sbjct: 257 IMRDYFSPSKARKKKICTKCGRTGHSNDECGVFDNYHFVYVNIAELRSRLIREFRKHTTQ 316
Query: 342 GVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYIN 401
F+ E ++ DW+ + FL+GNDF+P++P L I ++ L ++ + YI
Sbjct: 317 R-----FNEERLLSDWIFLCFLLGNDFVPSIPCLDIRFHSIDTLTEIMMKNFSETKSYIT 371
Query: 402 EGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHK----EKSKEMD 457
+N + F T LA + + K + L ++ + ++ K K+ ++
Sbjct: 372 CNTSINYQVLRNFYTILARKEDGLYHRKSQSLDRLREELKDMPNIIYEKIPIHTKTGKIQ 431
Query: 458 PDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLD 517
+ L TD D + E + A Y Y Y Y L
Sbjct: 432 YYTSKLNAKTDSDIKNICYEYIK-ALYWVYSY------------------------YILG 466
Query: 518 YAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYE 577
Y W+ +Y PHH+AP +D+ S ++
Sbjct: 467 YT------------------GWDWYY------------PHHFAPLAADLSKLSISEIRIN 496
Query: 578 MGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPIL----EYYPEEFATDLNGKKQD 633
G P P +QLL VLP SK ++P Q PI +YYPE+ TD+ K
Sbjct: 497 SGLPLRPLEQLLVVLPPMSKGMVPRELQ--------PIFNNYKDYYPEDVETDMFDKVYL 548
Query: 634 WEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
W+ VVL+PF+D ++ + + L E+ SRN L +T
Sbjct: 549 WQEVVLLPFMDFRSILSENASRFNSLGYEDLSRNLRSLDLFFT 591
>gi|154295528|ref|XP_001548199.1| hypothetical protein BC1G_13389 [Botryotinia fuckeliana B05.10]
Length = 854
Score = 199 bits (505), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 171/330 (51%), Gaps = 89/330 (26%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLP------------- 184
P+KL +AIDGVAPRAKMNQQR RRFRSA+EA+ +KA++K E L
Sbjct: 17 PRKLLMIAIDGVAPRAKMNQQRSRRFRSAQEAK---EKAEDKAELLKMLKSQGSHIEETE 73
Query: 185 TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETP 244
+K +DSN ITPGTPFM L LRY++ K+ TD W + VI+S P
Sbjct: 74 VKKAWDSNEITPGTPFMDILALSLRYWIAYKLNTDP---------AWAKMKVIISDSTVP 124
Query: 245 GEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFN--- 301
GEGEHKIM+++R +S PD+NPN RH +YGLDADLIMLGL THEP+F +LRE+V FN
Sbjct: 125 GEGEHKIMEFVRSQRSSPDHNPNTRHVMYGLDADLIMLGLATHEPHFRILREDVFFNDGK 184
Query: 302 -------------TKSNKGGSQI---------VTPEETKFFLLHLSLMRDYLELEFGKLK 339
+ KG +I P F LH+S++R+YL E +++
Sbjct: 185 PRTCKLCGQHGHEARECKGMYKIKDGEFDEKASAPTLKPFIWLHVSVLREYLAAEILEIR 244
Query: 340 EPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGY 399
E G+ + L ++++ +P + GY
Sbjct: 245 EDGINT---------------------------------------LIAIWRDNIPYMGGY 265
Query: 400 INEGGYLNLKRFEKFLTKLASFDFEQFREK 429
+ + G+++L+R + L LA + FR++
Sbjct: 266 LTKDGHVDLERAQFILDGLAKQEDAIFRKR 295
Score = 155 bits (391), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 99/160 (61%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K + E + Y+ + W L YY+ GC SW WYYP+HYAP+ +D +
Sbjct: 463 YYEQKFNRDPKDIEFRHEVGRAYVEGLAWVLLYYFQGCPSWDWYYPYHYAPFAADFANLK 522
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ + ++ G F PF+QL+ VLPAAS++ +PE + +LMT E+S I+++YPE+F DLNGK
Sbjct: 523 DMKIDFQKGRIFRPFEQLMGVLPAASRQAIPEQFHHLMTNEDSEIIDFYPEDFVVDLNGK 582
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
K W+ V L+PFID +L+ AM V L ++ +RN G
Sbjct: 583 KFAWQGVALLPFIDSERLLDAMAKVYPTLPEDVSARNGLG 622
>gi|71416427|ref|XP_810246.1| 5'-3' exonuclease XRNA [Trypanosoma cruzi strain CL Brener]
gi|70874749|gb|EAN88395.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 230
Score = 199 bits (505), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 122/175 (69%), Gaps = 15/175 (8%)
Query: 125 EKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLP 184
EK F+ I P+K FF+A+DGVAPRAKMNQQR RR+RS E V Q+A +GE +P
Sbjct: 69 EKLFNVIQ-----PRKYFFLAVDGVAPRAKMNQQRQRRYRSGYELMVARQEAIAQGEEVP 123
Query: 185 TEKR-FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHET 243
EK FDSNCITPGT FM R+ +Q +YF+ +KI TD W++ V+ SGH+
Sbjct: 124 DEKDVFDSNCITPGTNFMVRVSEQFQYFITMKIATDPAWQNCQ---------VVYSGHDN 174
Query: 244 PGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
PGEGEHKI+D+IR K +P Y+PN HC+YGLDADL+ML L THEP+F LLRE V
Sbjct: 175 PGEGEHKIVDFIRRRKMQPGYSPNETHCMYGLDADLVMLSLATHEPHFLLLREVV 229
Score = 144 bits (362), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/127 (56%), Positives = 91/127 (71%), Gaps = 2/127 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEKQ 59
MGVPKFFR+++ER P + R+ P DNLYLDMNGIIHNC+H ND D + TEK
Sbjct: 1 MGVPKFFRWVAERCPTVITPFRD-SPPPVDNLYLDMNGIIHNCTHTNDVDATQKSPTEKA 59
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ + +F Y+E LF +IQP+K FF+A+DGVAPRAKMNQQR RR+RS E V Q+A +G
Sbjct: 60 MMEAMFAYLEKLFNVIQPRKYFFLAVDGVAPRAKMNQQRQRRYRSGYELMVARQEAIAQG 119
Query: 120 ERLPTEK 126
E +P EK
Sbjct: 120 EEVPDEK 126
>gi|310831294|ref|YP_003969937.1| putative 5'-3' exonuclease [Cafeteria roenbergensis virus BV-PW1]
gi|309386478|gb|ADO67338.1| putative 5'-3' exonuclease [Cafeteria roenbergensis virus BV-PW1]
Length = 562
Score = 197 bits (502), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 163/553 (29%), Positives = 260/553 (47%), Gaps = 90/553 (16%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P + ++A+DGVAP AK+ QQR RRF+S + L + K+K +P K ++++ ITPG
Sbjct: 83 PTEGLYIAVDGVAPVAKIKQQRSRRFKSVSD-NALYDRLKDK-HNIPKNKFWNNSSITPG 140
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM ++ + ++ + T + +K +I S TPGEGEHKI+D+IR
Sbjct: 141 TDFMMKITKYIK-----EWATKQSYK------------IIFSSGNTPGEGEHKILDFIR- 182
Query: 258 MKSKPDYNPNMR---HCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTP 314
+ + +Y + + +YGLDADLI L + + L+RE N KG I+
Sbjct: 183 -QRQINYTNELNSGPYVIYGLDADLIFLSIALNRNDVYLMREAEHLN----KGKGDILQ- 236
Query: 315 EETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPD 374
L+ L +M++ + ++ E GV P + +I+D++ + + +GNDF+P+
Sbjct: 237 ------LIDLEVMKESINYTMLQMLE-GVEIKPTKTQ-LINDFIFICYFLGNDFLPHYQS 288
Query: 375 LHIINGALPLLYKVYQEV-----LPTLDGYINEGGYLNLKRFEKFLTKLASFD---FEQF 426
L I + LP+L K Y V LP L N N K +F+ LA + +
Sbjct: 289 LDIYDDGLPILLKTYATVISNTILPILKIQNNSTVQFNQKTLIEFIKLLAEQEEDILLKI 348
Query: 427 REKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEE 486
+K+ LEG +K + K DP L + T DDY YE
Sbjct: 349 SKKHIYKPRLEGTDYEKEVKRIEWLRFKINDP--VRLGEGTFDDYSKRY--------YEH 398
Query: 487 YYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYN 546
Y+Y +E + K+ E YI+ + W +YY+
Sbjct: 399 YFYGSNNE----------------------NIIKICYE--------YIKGLTWVTNYYFY 428
Query: 547 GCVSWSWYYPHHYAPYISDIKDFSHL----NLKYEMGEPFLPFQQLLAVLPAASKELLPE 602
G SW +YYP+ AP++ D+ +L + K++ G P P +QLLAV+P SK LLP
Sbjct: 429 GVPSWDYYYPYDQAPFLKDLSKVINLLDMTHFKFKKGTPLKPLEQLLAVMPPQSKYLLPT 488
Query: 603 PYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDE 662
Q L E SP+ YP +F D K++ W+ + L+PF++ + K +E LT +
Sbjct: 489 KVQRLFN-EESPLGHLYPIDFKQDFIHKRKYWQGIPLLPFLEIDTIQKEFSKIEKTLTPK 547
Query: 663 ERSRNRHGPMLVY 675
+ +NR +Y
Sbjct: 548 DLHKNRVDKEFIY 560
Score = 68.2 bits (165), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 1 MGVPKFFRYISERYPCLSEV--VREYQIPEFDNLYLDMNGIIH-NCSHPNDNDPHFR--- 54
MGVP FF ++ + Y V + E+ +F L LD N +IH C +P F+
Sbjct: 1 MGVPGFFLWLMKNYKKNKFVNNINEFNKTDFKWLCLDANCLIHPKCFEVLAENPDFKNLN 60
Query: 55 ITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQK 114
E ++ YIE L +++P + ++A+DGVAP AK+ QQR RRF+S + L +
Sbjct: 61 SLENKMISRCLEYIEKLVLLVKPTEGLYIAVDGVAPVAKIKQQRSRRFKSVSD-NALYDR 119
Query: 115 AKEK 118
K+K
Sbjct: 120 LKDK 123
>gi|194385576|dbj|BAG65165.1| unnamed protein product [Homo sapiens]
Length = 249
Score = 196 bits (499), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/164 (57%), Positives = 121/164 (73%), Gaps = 5/164 (3%)
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKE 340
MLGL +HE +FSLLREEV+F K + ++ PEET F LLHLSLMR+Y++ EF LKE
Sbjct: 1 MLGLTSHEAHFSLLREEVRFGGKKTQ---RVCAPEETTFHLLHLSLMREYIDYEFSVLKE 57
Query: 341 PGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYI 400
++F + IE IIDDW+LMGFL+GNDFIP+LP LHI + ALPLLY Y +LP L GYI
Sbjct: 58 K--ITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGTYVTILPELGGYI 115
Query: 401 NEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKF 444
NE G+LNL RFEK+L KL+ FD E F E + D+++ E K+G K+
Sbjct: 116 NESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFESKVGNKY 159
>gi|224065931|ref|XP_002301985.1| predicted protein [Populus trichocarpa]
gi|222843711|gb|EEE81258.1| predicted protein [Populus trichocarpa]
Length = 851
Score = 194 bits (492), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 130/342 (38%), Positives = 181/342 (52%), Gaps = 65/342 (19%)
Query: 128 FDFITLKFCF--PKKLFFMAI-DGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK----- 179
FD+I F P+KL +MAI + +MNQQR RRFR+AK+A + +
Sbjct: 82 FDYIDRLFVVVRPRKLLYMAIGEWSCTSYEMNQQRSRRFRAAKDAADAAAEEERLREEFE 141
Query: 180 --GERLP---TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDV 234
G +LP + + FDSN ITPGT FM L L Y WK +
Sbjct: 142 REGRKLPPKESSQTFDSNVITPGTEFMAVL---LNYDPG-----------------WKKI 181
Query: 235 CVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLL 294
ILS PGEGEHKIM YIR + P YNPN RHCLYGLDADLIML L THE FS+L
Sbjct: 182 KAILSDANVPGEGEHKIMSYIRLQSNLPGYNPNTRHCLYGLDADLIMLSLATHEVLFSIL 241
Query: 295 RE------------------------EVKFNTKS---NKGGSQIVTPEETKFFLLHLSLM 327
RE E K K+ ++ G+ + P++ F L++ ++
Sbjct: 242 REIVFTPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDEKGNDVAVPKKPYQF-LNIWIL 300
Query: 328 RDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYK 387
R+YLE EF ++ P F +E I+DD++ + F +GNDF+P++P L I GA+ LL
Sbjct: 301 REYLEYEF-RIPNP---PFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIREGAINLLMA 356
Query: 388 VYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
VY++ LDGY+ +G NL R E F+ + S++ + F+++
Sbjct: 357 VYKKEFRVLDGYLTDGSKPNLNRVEHFIQAVGSYEDKIFQKR 398
Score = 158 bits (400), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 120/217 (55%), Gaps = 16/217 (7%)
Query: 451 EKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTD 510
E +E+ L L++ D V N N+ E + W+ ++ + KT
Sbjct: 499 ENQEELKTKLKELLREKSD--------VFNSKNHGEDKVKLGEPGWKERYYEQKFSAKT- 549
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
+++ + +VLR Y + W +HYYY G SW W+YP+HYAP+ SD+KD
Sbjct: 550 --LEEMEDIRRDVKVLR-----YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLG 602
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
L++ +E+G PF PF QLL V PAAS LP Y+ LMT +SP +++YP +F D+NGK
Sbjct: 603 QLDISFELGSPFKPFNQLLGVFPAASSHALPVHYRKLMTDPSSPFIDFYPTDFEVDMNGK 662
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
+ W+ + +P IDE +L+ + +EH LT+EE RN
Sbjct: 663 RYAWQGIAKLPLIDESRLLAEVQKIEHTLTEEEARRN 699
Score = 91.7 bits (226), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 22/123 (17%)
Query: 1 MGVPKFFRYISERYPCL--------SEVVREYQIP-----------EFDNLYLDMNGIIH 41
MGVP F+R+++E+YP + V+ +IP E+DNLYLDMNGI+H
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVVIEGVKIPVDTSRPNPNNIEYDNLYLDMNGIVH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAI-DGVAPRAKMNQQRGR 100
C HP D E +FQ +F YI+ LF +++P+KL +MAI + +MNQQR R
Sbjct: 61 PCFHPEDRPSPTSFDE--VFQCMFDYIDRLFVVVRPRKLLYMAIGEWSCTSYEMNQQRSR 118
Query: 101 RFR 103
RFR
Sbjct: 119 RFR 121
>gi|222622867|gb|EEE56999.1| hypothetical protein OsJ_06746 [Oryza sativa Japonica Group]
Length = 391
Score = 193 bits (491), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 137/415 (33%), Positives = 200/415 (48%), Gaps = 110/415 (26%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ----IPEFDNLYLDMNGIIHNCSHPNDNDPHFRIT 56
MG+P F+R++ RYP + +E + I +DNLYLDMN
Sbjct: 1 MGIPSFYRWLVNRYPSIVSPAKESRPADGIVVYDNLYLDMN------------------- 41
Query: 57 EKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 116
QI FH P+ D AP +EV E
Sbjct: 42 --QIIHYSFH----------PQDQMNAGTDVCAP--------------TTVSEVFESM-- 73
Query: 117 EKGERLPTEKRFDFI--TLKFCFPKKLFFMAIDGVAPRAKMN-QQRGR--------RFRS 165
FD++ + P++L ++A+DGVAP AKMN +RGR R R
Sbjct: 74 -----------FDYLDRLFRIVRPRRLLYLAVDGVAPCAKMNGMRRGRPAEAIDRSRKRH 122
Query: 166 AKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDT 225
+L+ +E+ +++ +E D N ITPGT FM ++ Q L Y+++ ++ +
Sbjct: 123 PCFGSILQASEEEEMQKI-SEGVSDPNVITPGTEFMEKISQALTYYIRARLNSSDPG--- 178
Query: 226 LSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
WK + VILS PGEGEHKIM +IR +S Y+PN RHCL+G DADLIML L
Sbjct: 179 -----WKHIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLFGHDADLIMLALA 233
Query: 286 THEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLS 345
+HE +FS+LRE L++ ++R+YLE+E K+ +P +
Sbjct: 234 SHEVHFSILRE------------------------FLNIWVLREYLEIEL-KILDP--VC 266
Query: 346 FPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYI 400
P IE +IDD++ + FL+GNDFIP++P L + AL LL +VY+ + GYI
Sbjct: 267 EP-DIERLIDDFIFICFLMGNDFIPHIPSLEMKEYALDLLIEVYKTTFNKMGGYI 320
>gi|196007658|ref|XP_002113695.1| hypothetical protein TRIADDRAFT_26537 [Trichoplax adhaerens]
gi|190584099|gb|EDV24169.1| hypothetical protein TRIADDRAFT_26537 [Trichoplax adhaerens]
Length = 142
Score = 193 bits (490), Expect = 8e-46, Method: Composition-based stats.
Identities = 80/103 (77%), Positives = 97/103 (94%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR+ISERYPCLS++++E+QIPEFDNLYLDMNGIIHNCSHP+D + HFRI+E++I
Sbjct: 1 MGVPKFFRWISERYPCLSQIIKEHQIPEFDNLYLDMNGIIHNCSHPDDANAHFRISEEKI 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFR 103
F DIF YIE+LFR+I+P+K+ FMAIDG+APRAKMNQQR RRFR
Sbjct: 61 FLDIFSYIEVLFRIIKPRKVLFMAIDGIAPRAKMNQQRSRRFR 103
Score = 55.5 bits (132), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFR 164
F +I + F P+K+ FMAIDG+APRAKMNQQR RRFR
Sbjct: 65 FSYIEVLFRIIKPRKVLFMAIDGIAPRAKMNQQRSRRFR 103
>gi|123469088|ref|XP_001317758.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121900500|gb|EAY05535.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1020
Score = 192 bits (488), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 257/1108 (23%), Positives = 442/1108 (39%), Gaps = 205/1108 (18%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+ + F+++DG AP AK QQR RRF +A+++ F++ I+ G
Sbjct: 75 PQIVLFISVDGPAPFAKCTQQRSRRFVAARDS---------------VGAAFNTTAISVG 119
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM LHQ L + K K+ +D+ W +I S H TPGEGEHK +YIR
Sbjct: 120 TTFMEDLHQHLLEYFKRKVNSDRAWSTPQ---------LIYSSHRTPGEGEHKFFNYIRE 170
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLRE-EVKFNTKSNKGGSQI--VTP 314
++ DY+PN HC+Y DADLI L L + E Y ++RE + N G ++ +
Sbjct: 171 IRKTADYDPNSTHCIYSPDADLIFLALQSKEKYIYIMREWDAWVGPNENVGNGKLAKLKT 230
Query: 315 EETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPD 374
F LLHL ++++YL +F PG+ P S N++DD+ FLIGNDFIP+ PD
Sbjct: 231 GADDFELLHLPILKEYLSYDF-----PGI---PLS--NLVDDFAGFSFLIGNDFIPHFPD 280
Query: 375 LHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQ 434
+ I +G + YQ+ L Y+ G N + FL
Sbjct: 281 VIIQHGDFDQVVIAYQKSLLETKQYLIVDGKFNKPALQIFL------------------- 321
Query: 435 YLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSD--- 491
V H+ K+K + KA D +++ NY Y S+
Sbjct: 322 ----------RSVVHQLKNKSKKQE-----KAEQD------KQMQNYLKTARTYISEKYP 360
Query: 492 EDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYN-GCVS 550
E+ + F + D + + L+Y C + W Y+Y +
Sbjct: 361 EETKRDPEFEKKLSFSVLDSFDWVLEYY---------TEGC--PSWTWCFQYFYAPPLII 409
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTL 610
S Y H + + + S L +E LP Q +LP+A L+ P
Sbjct: 410 VSEYVLEHSSHF-----ELSRPPLPFEQLLCILP-PQSANLLPSALSSLMFSP------- 456
Query: 611 ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
SPI YYP F+ DLNG+ + E VVLIPF+D K+ + + + L E RN
Sbjct: 457 --SPISSYYPTSFSIDLNGRAVEHEGVVLIPFVDVEKVRELVSSNLSKLGPNETERNTII 514
Query: 671 PMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYV 730
P + + E P D+ K K C L L+
Sbjct: 515 PSYIISSEG---------------------EVPF---DVTFPRPKSTKSYCIPPGLPLFS 550
Query: 731 THFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVA-------DQILG 783
+ ++ V +FQ+PS+ ES++I D + + ++LG
Sbjct: 551 NPPMPMSIIRTV-----VPVNIFQRPSQGESLLISVDCSRYEEFPPMGLSDFEDPGEVLG 605
Query: 784 KTIFINYPHLIEIRVQAVATKDSRISFDKNSG----PVFERAAKDMQDAFQLSKKSITDG 839
K + +N+P L V V +S K+ P +M ++ K D
Sbjct: 606 KVVLVNWPFLRPCLVCQVGDCAGALSISKDGSICAIPSLSTEFCNM--IYKYKKDYALDV 663
Query: 840 YYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTF-IRSTVTYAYQSAVLNLQQA 898
K+ I +L E+R F V + + T T N++
Sbjct: 664 KQCKV---ILGVRLLCISNSGETRFTFANEITYVPFELCVPVSKTNTLERFFTTQNIESL 720
Query: 899 RESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLV 958
RE G + + G+ G VI +K + +K+ ++ +
Sbjct: 721 RE-------------GMKVVVTCGEYSGNVG-VIQQIKGDGVDVKIFKRIYPTSMKQEFE 766
Query: 959 HLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNE 1018
+D N++ +V + + P S F ++ + + E K N+ L + + K
Sbjct: 767 GSRD----NWVSYDSVLQEFGVDP---SLFHAALSSLPVSRE--KDLNVALTLFYDDKFL 817
Query: 1019 EVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDH-SSDDIYLRD--DVF--- 1072
E GF T + +++ +I Y K+ ++ FL+++ S ++ D D+F
Sbjct: 818 E--GFVNYSGKTLQ--LSKEAKFIIAEYFKRSGKLLDFLRNYDDSRELKFVDKTDLFDGS 873
Query: 1073 PHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKV-------EK 1125
P + +++ ++V W++E +VD K +++ + +++ E++ ++
Sbjct: 874 PSEVDRKTRELVQWIREVSKTSK------FYLVDNKYMTIEQSTLESLERLLIGSRIEDE 927
Query: 1126 QITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGET 1185
+I P + + + + + +RV+ I +C + P G G+I+G+ + +
Sbjct: 928 EICEVTIPISSILSR----GMQKSENQSAAISNRVICISECGSTPFGTFGSIVGLDRKKR 983
Query: 1186 SYDAMYDVVFDKPFPHGVKIRCSESRGY 1213
+ D V + F ++ R + RG+
Sbjct: 984 EAFVLSDEVLE--FGTNMRKRLTTLRGF 1009
Score = 84.0 bits (206), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP F+R++++RYP + + + P+ D Y+D N II+N I Q+
Sbjct: 1 MGVPGFYRWVTQRYPLVRRRMNDPARPKIDYFYIDFNCIIYNALRSISMSSGGTIL--QL 58
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA 108
F ++ Y+++L ++I+P+ + F+++DG AP AK QQR RRF +A+++
Sbjct: 59 FNEVCRYLDVLVQVIKPQIVLFISVDGPAPFAKCTQQRSRRFVAARDS 106
>gi|300706190|ref|XP_002995390.1| hypothetical protein NCER_101741 [Nosema ceranae BRL01]
gi|239604457|gb|EEQ81719.1| hypothetical protein NCER_101741 [Nosema ceranae BRL01]
Length = 616
Score = 192 bits (487), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 177/704 (25%), Positives = 296/704 (42%), Gaps = 180/704 (25%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MGVP F ++++++P C+++ E + D LY+D N IIHNC +PN + +
Sbjct: 1 MGVPILFSWLNKKFPDCITQKPPE----QVDILYIDYNAIIHNCYNPNLG------SLDK 50
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
I++D+ I+ L +M+ D + +AK
Sbjct: 51 IYEDM---IDRLTKMV----------DNIVEKAK-------------------------- 71
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE----------- 168
P+K+ ++A+DGVAP AK+ QRGRR+++A E
Sbjct: 72 ------------------PRKILYIAVDGVAPAAKLAHQRGRRYKAASEKAGPNGYIDFS 113
Query: 169 --AEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTL 226
E+ Q+ + PT FDSN ITPGT M LH+ + + + T+
Sbjct: 114 SNVEITTQEGALTS-KPPTANIFDSNSITPGTELMKFLHKNIIDMLIYNLNTNP------ 166
Query: 227 SLWVWKDVCVILSGHETPGEGEHKIMDYIR-YMKSKPDYNPNMRHCLYGLDADLIMLGLC 285
+KD+ ++ S + PGEGE KIM ++R Y S NP H +Y D D+I LG+
Sbjct: 167 ---NYKDLKILYSSYLVPGEGEQKIMAFLRKYHLS----NPKDTHVMYSPDGDIIFLGVS 219
Query: 286 THEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLS--------LMRDYLELEFGK 337
++ ++RE+ FN+K+ K ++ + + H S L+ Y+++ K
Sbjct: 220 LYDVNLYIMREDT-FNSKNKKEICRMCSR------MGHFSEQCNRPDLLIYSYIDVP--K 270
Query: 338 LKEPGVLSFPFSIE----NIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVL 393
+ + F IE ++ DWVL+ FL+GNDF+P +P + I G++ L +
Sbjct: 271 FRASLLKIFNIKIEYVEKRMLTDWVLVCFLLGNDFLPGIPCVDIKIGSIENLTSTLCDNF 330
Query: 394 PTLDGYI-NEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEK 452
YI E +N K E F L++ + + + K KM + + +E
Sbjct: 331 TNCKDYITTEDKNINFKILECFFVLLSTRENDWYNNK--------TKMLNRSCNFIREEI 382
Query: 453 SKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYY 512
LN + YY+ S+FG H
Sbjct: 383 Q-------------------------LNTPQGRQKYYN-----------SKFGAHC---- 402
Query: 513 HYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHL 572
+ D+ ++ E YI I W +YY G SW W YP+H+AP++ D+ +
Sbjct: 403 --EADFNNISQE--------YITGILWTFNYYIGGKTSWDWVYPYHFAPFVRDLVNVVRA 452
Query: 573 NLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQ 632
+ + G PF+QL+ V+P SK L+ E + + + YP D+ K
Sbjct: 453 HYDLKKGCVLTPFEQLMVVIPPQSKNLVTEKLRYIF----DEYKDLYPLTIKFDMFDKYL 508
Query: 633 DWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
W VVL+P + ++ A+ + ++ E RN L++
Sbjct: 509 LWTGVVLLPPFNSQVVLNAVKGKINEISASELDRNTEESELLFV 552
>gi|188501630|gb|ACD54753.1| 5-3 exoribonuclease 2 isoform 9-like protein [Adineta vaga]
Length = 510
Score = 192 bits (487), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 157/565 (27%), Positives = 266/565 (47%), Gaps = 88/565 (15%)
Query: 111 LEQKAKEKGERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE 168
L+ + K E + F++I F P+ L +M+IDGVAP+AKM+Q+R + AK+
Sbjct: 11 LDDLSTLKSEDEIIQGVFEYIDEIFSIIHPRNLIYMSIDGVAPKAKMHQERVSLYNYAKK 70
Query: 169 AEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
++F I PGT FM +L +LR ++ ++ S+
Sbjct: 71 HS-------------SDNEQFTKCDIKPGTMFMSKLSDKLRSYIHDRMN---------SI 108
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
WK + VILS PGEGEHK MD+IR K N N H L+ D+D+++LGL
Sbjct: 109 PAWKSIIVILSDANVPGEGEHKTMDFIRSQKFS---NSNTNHVLFSGDSDMVLLGLTMPS 165
Query: 289 PYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEF-GKLKEPGVLSFP 347
++R K+NK ++ T + L L+R+ ++ EF G LK
Sbjct: 166 DNVRIMRR------KTNK--IEVYTFRD-------LKLLREEIKNEFIGDLK-------- 202
Query: 348 FSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGAL-PLLYKVYQEVLPTLDGYINEGGYL 406
+IIDDW+ + L GNDF+PNLP + + +++ Y+E + D Y+ E
Sbjct: 203 ----SIIDDWIFLCLLAGNDFLPNLPSIEFNQTEINNVIFDTYKEYIRKKDVYLIENMEP 258
Query: 407 NLKRFEKFLTKLASFDFEQFREKYADIQYLE-GKMGKKFSDVFHKEKSKEMDPDLAALIK 465
NL+ F+ L + + ++ + LE + +S +++ +P
Sbjct: 259 NLEYFKILLKHIGEIEEDKV------MSLLERSQTATNYSLDEIRKQEPITNPSAIRFAP 312
Query: 466 ATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKV-TNE 524
+ + T + +++ YY D +FG +K D K + E
Sbjct: 313 PSFQKSRNPTSSTESATHWQRQYYKD-----------KFG--------FKGDQLKTKSTE 353
Query: 525 VLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEM-GEPFL 583
V++ AE + W LHYYY G SW WYY ++Y P S + ++ + + +P
Sbjct: 354 VVQHYAE----GLCWVLHYYYKGVPSWDWYYSYYYPPLASTFSNLENIPMNFNRNSKPLK 409
Query: 584 PFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFI 643
P + +LA+ P+ LP+ +Q L++ S I+++Y + A D +GK+ + + +V +PF+
Sbjct: 410 PLEHMLAIFPSKYARYLPKNWQELISDMKSSIIDFYRSDPAIDAHGKRYEEQYIVKLPFV 469
Query: 644 DEVKLIKAMDAVEHLLTDEERSRNR 668
DE L +A+ +++ L+ EE RNR
Sbjct: 470 DEKCLFEALKSIDSTLSKEEEKRNR 494
Score = 63.2 bits (152), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MN II+ C+ N +D +E +I Q +F YI+ +F +I P+ L +M+IDGVAP+AKM+
Sbjct: 1 MNEIIYLCA--NLDDLSTLKSEDEIIQGVFEYIDEIFSIIHPRNLIYMSIDGVAPKAKMH 58
Query: 96 QQRGRRFRSAKE 107
Q+R + AK+
Sbjct: 59 QERVSLYNYAKK 70
>gi|340508935|gb|EGR34531.1| hypothetical protein IMG5_008400 [Ichthyophthirius multifiliis]
Length = 263
Score = 189 bits (480), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/322 (36%), Positives = 162/322 (50%), Gaps = 91/322 (28%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQI-------PEFDNLYLDMNGIIHNCSHPNDNDPH 52
MGVP FFR++ R P + + Y+ PE NLYLDMNGIIH C + +
Sbjct: 1 MGVPAFFRWLCSRNPQFILDAFENYENFSEPSNNPEIHNLYLDMNGIIHPCCRSDGS--- 57
Query: 53 FRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLE 112
+ QD+F+ I FM ID +
Sbjct: 58 -AMPIPNTIQDMFNNI-------------FMYIDKL------------------------ 79
Query: 113 QKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVL 172
+ C P+++ +MAIDGVAPRAKMNQQR RRF+ AKEA L
Sbjct: 80 --------------------MDICRPQRILYMAIDGVAPRAKMNQQRARRFKGAKEAVEL 119
Query: 173 EQKA-------KEKGERLP------TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTD 219
++K +++GE +P E +FD+N ITPGT FM L L+++V ++
Sbjct: 120 QKKKLEIINEQRQQGEDIPEEVMRFVESKFDTNVITPGTQFMRDLSIALQHYVLDRVNNH 179
Query: 220 KLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADL 279
LWK+ + V+ S PGEGEHKI+++IR +S+ Y+PN +HCLYG DADL
Sbjct: 180 PLWKN---------LKVVFSDASIPGEGEHKILNFIRIQRSQDQYDPNSKHCLYGADADL 230
Query: 280 IMLGLCTHEPYFSLLREEVKFN 301
+MLGL THEPYF ++RE++ N
Sbjct: 231 LMLGLSTHEPYFYIIREQIISN 252
>gi|219111223|ref|XP_002177363.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411898|gb|EEC51826.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 156
Score = 187 bits (474), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 115/165 (69%), Gaps = 13/165 (7%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE-AEVLEQKAKEKGERLPTEKRFDSNCITP 196
PK +MAIDGVAPRAK+NQQR RRFRSA + AE + EKG + + FDSNCITP
Sbjct: 4 PKVSVYMAIDGVAPRAKLNQQRSRRFRSAMDMAEATKDLKDEKGNQ---REVFDSNCITP 60
Query: 197 GTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIR 256
GT F+ ++ ++YF++ KI D W + VI SGH+ PGEGEHKIM +IR
Sbjct: 61 GTEFLAKVSNTIQYFIRKKIKEDP---------SWHGLTVIFSGHDVPGEGEHKIMQHIR 111
Query: 257 YMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFN 301
M+++P+Y PN RHC+YG DADLIMLGL THEP+F++LRE + FN
Sbjct: 112 EMRAQPNYAPNTRHCIYGQDADLIMLGLVTHEPHFTILREVIDFN 156
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 74 MIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE-AEVLEQKAKEKG 119
+++PK +MAIDGVAPRAK+NQQR RRFRSA + AE + EKG
Sbjct: 1 IVKPKVSVYMAIDGVAPRAKLNQQRSRRFRSAMDMAEATKDLKDEKG 47
>gi|167377811|ref|XP_001734553.1| 5'->3' exoribonuclease [Entamoeba dispar SAW760]
gi|165903890|gb|EDR29281.1| 5'->3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 662
Score = 187 bits (474), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 158/551 (28%), Positives = 250/551 (45%), Gaps = 104/551 (18%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K+ F+ +DGV P AK+ QQR RR+ S + FDSN ITPG
Sbjct: 86 PRKMIFIGVDGVCPVAKIIQQRKRRYCSI----------------INNNGGFDSNSITPG 129
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM ++ L ++ ++ D W + VILS + GEGEHKI ++IR
Sbjct: 130 TKFMEKIGIALHGYIVNRMDNDI---------YWSGLRVILSDSKVAGEGEHKIYEFIRK 180
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE---VKFNTKSNKGGSQIVTP 314
K RHC+YG+D DLI+L L + ++LREE +K N K + G + T
Sbjct: 181 EIEKNCKFKEERHCIYGMDGDLIILTLGINITNMTILREEQEIIKKNIKCDICGKKHKTK 240
Query: 315 E---ETKFFLLHLSLMRDYLELEFGK---------------LKEPGVLSFPFSIENIIDD 356
+ ETK + + + +R +L E K + E II+D
Sbjct: 241 DHGKETKLIMCYPNELRKWLINEAKKNLIETKKEEKEKKGEEYKEEEEEINIIEEEIIND 300
Query: 357 WVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLT 416
++L+ FL+GNDF+P +P + I + +L K Y ++ Y+ KR L+
Sbjct: 301 FILISFLVGNDFLPRIPSIKIQTRGMEILLKNYWKL------------YVKGKR----LS 344
Query: 417 KLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTE 476
K + + F+E + I G++ S++ L +I+ T D +
Sbjct: 345 KGTEINIKNFKELFKMI-------GEEESNI------------LKEIIQNTKKD-----K 380
Query: 477 EVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRA 536
EV Y++ Y D +E + N + G H +Y++ + E +++ Y
Sbjct: 381 EV---KVYDQNIYFDSSKEIKLN---QEGYHDR---YYQIHFNTTNIEFIQNIVHHYFEG 431
Query: 537 IQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLN--LKYEMGEPFLPFQQLLAVLPA 594
I W +YY N SW WYY HYAP+ D + + N + + P LP +QLL+VLP
Sbjct: 432 ISWVFNYYLNKLPSWRWYYKFHYAPFALDFALYLNENDSISFSSDTPILPLEQLLSVLPP 491
Query: 595 ASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDA 654
S +P + + NSPIL Y+ F D+NG+ + ++ + L+P ID +D
Sbjct: 492 HSFNNIPSKLAHFVLSPNSPILHYFNTSFKIDINGENKLYKGIPLLPNID-------IDL 544
Query: 655 VEHLLTDEERS 665
+ + D E S
Sbjct: 545 LHSFVFDLELS 555
Score = 68.9 bits (167), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 13/115 (11%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIP----------EFDNLYLDMNGIIHNCSHPNDN 49
MGVP F ++ + P + + +E Q E+DNLY+D NGIIH CSH
Sbjct: 1 MGVPSLFAWVKQICPKYVKRLPKEIQGKDKREKNETGEEYDNLYIDFNGIIHQCSHSEKE 60
Query: 50 DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
+ +E++I + IF I+ ++P+K+ F+ +DGV P AK+ QQR RR+ S
Sbjct: 61 EE--AKSEEEIMERIFKEIDRYVNYVRPRKMIFIGVDGVCPVAKIIQQRKRRYCS 113
>gi|355729461|gb|AES09875.1| 5'-3' exoribonuclease 1 [Mustela putorius furo]
Length = 190
Score = 186 bits (473), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 131/195 (67%), Gaps = 10/195 (5%)
Query: 547 GCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQN 606
G SWSWYYP+HYAP++SDI++ S L + +E+G+PF PF+QLLAVLPAASK LLP YQ+
Sbjct: 1 GVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQH 60
Query: 607 LMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSR 666
LMT E+SPI+EYYP +F TDLNGK+Q+WEAVVLIPFIDE +L++AM+ H L EER R
Sbjct: 61 LMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKR 120
Query: 667 NRHGPMLVYTYSNVNLGT--ALAPDYFPAINENHAVEKPLYRDD--IYVHPNKLRKGLCQ 722
N+H L+ Y T + P+ FPAI K + D I + NK+ +
Sbjct: 121 NQHSECLMCWYDRDTEFTYPSPWPEKFPAIEHCCTRYKIISLDAWRIDISKNKITR---- 176
Query: 723 DVNLK-LYVTHFPTL 736
V+ K LY FPTL
Sbjct: 177 -VDQKALYFCGFPTL 190
>gi|407849157|gb|EKG03993.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 383
Score = 185 bits (470), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 162/306 (52%), Gaps = 35/306 (11%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE---AEVLEQKAKE----KGERLP-TEKRF 189
P+K + IDGVAP++KMNQQR RRFR+A+E +EV + E KG LP T R+
Sbjct: 92 PRKCLVLCIDGVAPQSKMNQQRSRRFRAAEERIESEVFSAQCAEEVVKKGLPLPQTRSRW 151
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
D N ITP TPFM R+ + +F+ KI D W+ + VI S PGEGEH
Sbjct: 152 DHNVITPSTPFMERVGLAIEWFIMKKINEDP---------AWRHIAVIFSDAHVPGEGEH 202
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGS 309
KIM YIR ++++ YNP H ++G+DADLI LGL THE + ++LR ++ +
Sbjct: 203 KIMHYIRELRAQLGYNPQTSHVIHGMDADLICLGLSTHEEHVTILRNQL----------T 252
Query: 310 QIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFI 369
+ P+ +F L R L +FG + G + F E ++DD++ + F +GNDF+
Sbjct: 253 ETFQPDHNRFCYFSLYKYRLRLRDDFGGI---GQMDF----ERVLDDFIFLCFFVGNDFL 305
Query: 370 PNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
P++P + I + LL Y Y+ GG +N KFL E+ +++
Sbjct: 306 PHVPLISIKTKGIELLLDHYVRGFKD-HSYLTHGGEVNYGNLTKFLRFFVVGYMEKLKQE 364
Query: 430 YADIQY 435
Y + +
Sbjct: 365 YGGVLW 370
Score = 84.7 bits (208), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 81/153 (52%), Gaps = 25/153 (16%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREY---------------QIPEFDNLYLDMNGIIHNCS 44
MG+ F+ ++ Y C+ +V E FDN YLDMNG+IH C
Sbjct: 1 MGIAGFYLWLQRWYGDCVEDVPEEVVKAALDGQPLPASSDTTQRFDNFYLDMNGLIHPCC 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
H P E+ + IF +++L+++++P+K + IDGVAP++KMNQQR RRFR+
Sbjct: 61 HDTAPLPEPESEEEMFER-IFAQVDLLYKIVRPRKCLVLCIDGVAPQSKMNQQRSRRFRA 119
Query: 105 AK---EAEVLEQKAKE----KGERLP-TEKRFD 129
A+ E+EV + E KG LP T R+D
Sbjct: 120 AEERIESEVFSAQCAEEVVKKGLPLPQTRSRWD 152
>gi|428182412|gb|EKX51273.1| hypothetical protein GUITHDRAFT_157234 [Guillardia theta CCMP2712]
Length = 252
Score = 185 bits (470), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 115/175 (65%), Gaps = 10/175 (5%)
Query: 133 LKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSN 192
+K P++L F+A+DG APRAKMNQQR RRFR+A E A+E+GE +P + FDSN
Sbjct: 72 MKVVRPQRLLFLAVDGCAPRAKMNQQRQRRFRAASELSKSLMNARERGEEIPQDP-FDSN 130
Query: 193 CITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIM 252
CITPGT FM RL L YF++ KI D +W +ILSG E PGEGEHKIM
Sbjct: 131 CITPGTQFMARLTNFLNYFIQSKIKDDP---------IWAKAKIILSGAEVPGEGEHKIM 181
Query: 253 DYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKG 307
+YIR KS+ + N+RHC++G DADLIML L THEP+F+LLRE ++G
Sbjct: 182 EYIRREKSQESWPSNLRHCIFGNDADLIMLSLATHEPHFALLRETYDAQQGGDRG 236
Score = 142 bits (357), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 93/126 (73%), Gaps = 2/126 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQI-PEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MG+PKFFR++SERYP +++ ++ I PEFDNLYLDMNGIIH C+H ND + R+TE
Sbjct: 1 MGIPKFFRWLSERYPLINQDIKAGTIFPEFDNLYLDMNGIIHPCTHGNDGEV-VRMTEND 59
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+F I +++ L ++++P++L F+A+DG APRAKMNQQR RRFR+A E A+E+G
Sbjct: 60 MFVAIGKFVDELMKVVRPQRLLFLAVDGCAPRAKMNQQRQRRFRAASELSKSLMNARERG 119
Query: 120 ERLPTE 125
E +P +
Sbjct: 120 EEIPQD 125
>gi|223993125|ref|XP_002286246.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977561|gb|EED95887.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 182
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/184 (49%), Positives = 118/184 (64%), Gaps = 19/184 (10%)
Query: 128 FDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEV---------LEQKAKE 178
D I PK+L F+AIDGVAPRAK+NQQR RR+RS E E+ + + E
Sbjct: 8 LDRIVSDIVQPKQLVFLAIDGVAPRAKLNQQRSRRYRSGSEKEIEMHLMTLQPISINSDE 67
Query: 179 KGERLPTEKR-FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVI 237
E E F SNCITPGTPF+ + Q++ F++ K+ TD W D+ +I
Sbjct: 68 SAELSQDENHGFHSNCITPGTPFLYKCSQRILEFIRHKLQTDP---------KWHDLTII 118
Query: 238 LSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE 297
SGH+ PGEGEHKIMD++R+ K+KP Y+PN+RHC+YG D DL+MLGL THEP+ LLREE
Sbjct: 119 FSGHDVPGEGEHKIMDFMRHEKNKPGYDPNLRHCIYGQDGDLVMLGLATHEPHLCLLREE 178
Query: 298 VKFN 301
V F+
Sbjct: 179 VVFD 182
>gi|255072731|ref|XP_002500040.1| predicted protein [Micromonas sp. RCC299]
gi|226515302|gb|ACO61298.1| predicted protein [Micromonas sp. RCC299]
Length = 249
Score = 183 bits (464), Expect = 1e-42, Method: Composition-based stats.
Identities = 113/263 (42%), Positives = 142/263 (53%), Gaps = 62/263 (23%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MNGIIH C HP D TE+++F+ IF YI+ LF MI+P+KL +MAIDGVAPRAKMN
Sbjct: 1 MNGIIHPCFHPEDRPA--PTTEEEVFECIFDYIDRLFAMIRPRKLLYMAIDGVAPRAKMN 58
Query: 96 QQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKM 155
QQR RRFR+A+EA+ E++ ++ E+L E V PR K
Sbjct: 59 QQRSRRFRAAQEAKEKEEEDEKLREKLRREGV--------------------NVPPRQK- 97
Query: 156 NQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLK 215
+ FDSN ITPGTPFM RL L+Y+V +
Sbjct: 98 ------------------------------SEAFDSNVITPGTPFMGRLSAALQYYVHQR 127
Query: 216 ITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGL 275
+ TD W+ V VI+S PGEGEHK M YIR + ++PN +H +YGL
Sbjct: 128 MNTDP---------AWRGVKVIMSDASVPGEGEHKAMHYIRQQRGLKGFDPNTKHVVYGL 178
Query: 276 DADLIMLGLCTHEPYFSLLREEV 298
DADLIML L THEP F +LRE V
Sbjct: 179 DADLIMLALATHEPNFWILREVV 201
>gi|198413911|ref|XP_002125004.1| PREDICTED: similar to 5-3 exoribonuclease 1, partial [Ciona
intestinalis]
Length = 670
Score = 182 bits (463), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 194/362 (53%), Gaps = 21/362 (5%)
Query: 885 TYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIK 943
T+A Q+ + ++ ++++ T+ E+F Q F L PHYG G V ST + +
Sbjct: 3 TFALQTVLKDITVKEQTMKSVTTVAEMFPQDAQVFNLGVPHYGCMGKVCSTHGGNATVL- 61
Query: 944 LSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAK 1003
FK+ EP+L+ + + T+ +Y P + +AS + I+ LLSR TGSI+I +
Sbjct: 62 --FKIPPEPNLTKIFK-KMHTMSSYHPGWKIASNVGITGYLLSRITGSIYIYYPE---TR 115
Query: 1004 RHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDH--- 1060
+ +IGLN+KF+++ + GFT+R + +W Y++ V L+ Y ++FP V +L++
Sbjct: 116 KWSIGLNLKFTKEKSGIAGFTKRKDN--EWLYSDAVTKLLLAYKQRFPRVLQYLEESLMK 173
Query: 1061 SSDDIYLRDDVFPHQGE-QRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDT 1119
+S+D + + +G +++ ++ WLK P + ++ VVS I+ +
Sbjct: 174 TSEDSLDLEAMMGSEGIIEKLQELSKWLKSLPSYGGTKVHESSNTIEPIVVSAIDEEIQL 233
Query: 1120 CEKVEK----QITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRG 1175
+ K ++ L V + LY P L PD K DRVVN+R+ +TVPLG RG
Sbjct: 234 FKNKTKDKTTEVKLSVLSHYLYRPLVQQGTLTPDKQAKHHELDRVVNVREGHTVPLGLRG 293
Query: 1176 TIIGI-VQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGN 1232
TIIGI +G + ++DV+FD F G+ + RC RGY +P ++INL++GER
Sbjct: 294 TIIGIHTRGSSEQGVVFDVMFDDEFMGGLTLGGRCPPRRGYSLPIYSVINLTHGERTMNK 353
Query: 1233 SN 1234
+N
Sbjct: 354 NN 355
>gi|320586314|gb|EFW98993.1| RasGAP [Grosmannia clavigera kw1407]
Length = 3016
Score = 181 bits (460), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 148/456 (32%), Positives = 215/456 (47%), Gaps = 119/456 (26%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ---------IP-----------EFDNLYLDMNGII 40
MG+P FR++S +YP + V E Q IP EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEQQPQTMEDGTIIPVDTSGPNPNGEEFDNLYLDMNGIV 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H CSHP D P + E+++ +IF Y + + M++P+KL +A+DGVAPRAKMNQQR R
Sbjct: 61 HPCSHPEDR-PAPK-DEEEMMLEIFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFRSA+EA+ E+ KE + L + GV P
Sbjct: 119 RFRSAQEAQEKEEDKKELLKLLKQQN--------------------GGVLP--------- 149
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYF-VKLKITTD 219
E LE AK K FDSN ITPGTPFM L LRY+ V + D
Sbjct: 150 --------TETLETAAK---------KAFDSNSITPGTPFMDILAASLRYWHVIYGLDAD 192
Query: 220 KLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDY-NPNMRHCLYGLDAD 278
+ + L+ HE Y R ++ + + R C
Sbjct: 193 L-------------IMLSLATHEP----------YFRVLREDVFFQDSKARTCR------ 223
Query: 279 LIMLGLCTHEPYFSLLREEVK-----FNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLEL 333
+ G HE S + EVK F+ K + + P F LH+S++R+YL +
Sbjct: 224 --LCGQKGHEA--SACKGEVKEKDGEFDEKDKE---HPLKP----FIWLHVSVLREYLAV 272
Query: 334 EFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVL 393
E L PG L F + +E IDDW+ + +GNDF+P+LP L I + L ++++ L
Sbjct: 273 E---LDVPG-LPFRWDLERAIDDWIFLCCFVGNDFLPHLPALEIRENGINTLTGLWKDNL 328
Query: 394 PTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
++GY+ + G+++L+R + ++ LA + FR +
Sbjct: 329 QYMNGYVTKDGHVDLERAQYIMSGLAKQEDGIFRRR 364
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 102/164 (62%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E A Y+ + W L YY+ GC SW WYYP+HYAP+ +D D
Sbjct: 543 YYEQKFHVDPRDVEFRHGVARSYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFVDLG 602
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
++L ++ G PF+QL++VLPAAS+ +PE + +LMT E+S I+++YP +F DLNGK
Sbjct: 603 KMDLVFQKGRISRPFEQLMSVLPAASRHAIPEIFHDLMTNEDSEIIDFYPVDFDIDLNGK 662
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLV 674
K W+ V L+PFID +L+ A++ LL+ E++ RN G +++
Sbjct: 663 KFAWQGVALLPFIDMKRLLAAVEKKYPLLSPEDQVRNGVGKVVM 706
>gi|84995660|ref|XP_952552.1| 5'-3' exoribonuclease 2 [Theileria annulata strain Ankara]
gi|65302713|emb|CAI74820.1| 5'-3' exoribonuclease 2, putative [Theileria annulata]
Length = 1467
Score = 181 bits (459), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 202/422 (47%), Gaps = 76/422 (18%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+P FFR+++ERYP + E + S + D + +
Sbjct: 1 MGIPSFFRWLAERYPLICES--------------------QDVSTADKGDAFMLLKNPES 40
Query: 61 FQDIFHYIEILFRMIQPKKL--FFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
F+D F + + + P ++ ++G+ + L Q +
Sbjct: 41 FRDKFENLNL--NLTPPDGFDNLYLDVNGIVHNC------------SHSVVDLCQNITCE 86
Query: 119 GERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAE----VLEQ 174
+ + + + PKKL ++A+DGVAPRAK+ QQR RRFR+A E+ +L+
Sbjct: 87 DDIFVSIFQCIINIVNIVRPKKLLYLAVDGVAPRAKIIQQRERRFRAAMESTQQQIILDS 146
Query: 175 -KAKEKGERLPT------EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
K E GE E +FD ITPGT FM RL +L++F I ++
Sbjct: 147 LKDMENGEESADLNEKEEEFKFDPIQITPGTAFMERLTSRLQFFALKMINENQ------- 199
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIR---------YMKSKPDYN------PNMRHCL 272
W+++ +++SG + PGEGEHKIM+YIR Y K + N P + HC+
Sbjct: 200 --QWRNLKIVVSGSDVPGEGEHKIMEYIRNDKAIRHAEYEKMIRNGNKEKKGVPYVSHCV 257
Query: 273 YGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLE 332
YGLDADLI+L L THEPY LLRE+V F N +++ + LLH+ ++R+YL
Sbjct: 258 YGLDADLIVLSLATHEPYICLLREQVVFGHMKNSSKMRMMV-NMNNYILLHIGILREYL- 315
Query: 333 LEFGKLKEPGVLSFPFSI-ENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQE 391
L E L ++ + ++DD+V + +GNDF+P++ +I G + ++Y+E
Sbjct: 316 --VADLVEDLRLRSDLNVMDRVVDDFVFLTMFVGNDFLPHIHMANIPEGGFNHMLQIYRE 373
Query: 392 VL 393
L
Sbjct: 374 YL 375
Score = 94.7 bits (234), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 23/151 (15%)
Query: 526 LRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI----------------KDF 569
+ D Y+ +QW L+YYY G SW+W+ P Y P+++D+ F
Sbjct: 536 VEDVVREYLHGVQWILYYYYRGVPSWNWHLPCKYPPFVNDMLLFLKNTKRKLTMTDKAQF 595
Query: 570 SH-------LNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEE 622
S+ L++ + G+P PF+QL+ VLP S LP + L+T + SP+ +YYP
Sbjct: 596 SYPLLLSDVLHISFVKGKPITPFEQLMLVLPPQSAHFLPSVFSRLITDQESPLHQYYPLH 655
Query: 623 FATDLNGKKQDWEAVVLIPFIDEVKLIKAMD 653
F D++ W + LIP + L++ M+
Sbjct: 656 FDVDMDNTNVPWGGITLIPLVPYPLLLQQMN 686
>gi|358400793|gb|EHK50119.1| hypothetical protein TRIATDRAFT_280608 [Trichoderma atroviride IMI
206040]
Length = 454
Score = 177 bits (450), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 159/322 (49%), Gaps = 69/322 (21%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MG+P FR++S +YP +S V+ + I D + + ++ + PN N
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEQTPIVTEDGITIPVD-----TTQPNPNGEEL------ 49
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
++ ++G+ + R A E+
Sbjct: 50 -------------------DNLYLDMNGIVHPCSHPEDR-------------PAPADEEE 77
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 179
L K D + + P+K+ +A+DGVAPRAKMNQQR RRFRSA+EA+ E+ +
Sbjct: 78 MMLEVFKYTDRV-VNMVRPRKILMIAVDGVAPRAKMNQQRSRRFRSAQEAKEKEEDKQAL 136
Query: 180 GERLP---------------TEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKD 224
E L +K FDSN ITPGTPFM L LRY+ + K+ TD
Sbjct: 137 IELLKRQNGGTFAAADSETVVKKAFDSNSITPGTPFMDILALSLRYWCQYKLNTDP---- 192
Query: 225 TLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGL 284
W + +I+S PGEGEHKIM+++R ++ P+Y+PN RH +YGLDADLIMLGL
Sbjct: 193 -----AWAKLKIIISDATVPGEGEHKIMNFVRSQRASPNYDPNTRHVIYGLDADLIMLGL 247
Query: 285 CTHEPYFSLLREEVKFNTKSNK 306
THEP+F +LRE+V F N+
Sbjct: 248 ATHEPHFRVLREDVFFQDGKNR 269
>gi|154317858|ref|XP_001558248.1| hypothetical protein BC1G_02912 [Botryotinia fuckeliana B05.10]
Length = 185
Score = 177 bits (448), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 105/129 (81%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKFFR++SERYP +S+++ E +IPEFD LYLDMNGIIHNC+H + +D FR+TE+Q+
Sbjct: 1 MGVPKFFRWMSERYPSISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDDATFRMTEEQM 60
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF+YIE L+ I+PK+LF+MA+DGVAPRAKMNQQR RRFR+A + E +KA ++G+
Sbjct: 61 FIAIFNYIEHLYGKIKPKQLFYMAVDGVAPRAKMNQQRARRFRTALDVENAREKAIKEGK 120
Query: 121 RLPTEKRFD 129
+P E FD
Sbjct: 121 EMPKEDAFD 129
Score = 117 bits (293), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 74/107 (69%), Gaps = 9/107 (8%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK+LF+MA+DGVAPRAKMNQQR RRFR+A + E +KA ++G+ +P E FDSN ITPG
Sbjct: 77 PKQLFYMAVDGVAPRAKMNQQRARRFRTALDVENAREKAIKEGKEMPKEDAFDSNSITPG 136
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETP 244
T FM +L QL+YF+ KI+ D W+ T ++LSGHE P
Sbjct: 137 TEFMQKLTLQLKYFIAKKISEDVDWQGTE---------IVLSGHEVP 174
>gi|428673024|gb|EKX73937.1| XRN 5'-3' exonuclease family protein [Babesia equi]
Length = 1049
Score = 176 bits (447), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 158/619 (25%), Positives = 261/619 (42%), Gaps = 161/619 (26%)
Query: 132 TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK------------------------ 167
T K P+K+ ++A+DGV P AK+NQQR RRFR K
Sbjct: 510 TFKLVKPRKVMYIAVDGVCPSAKINQQRTRRFRLCKVIDKVKSILEPEEDTESEEDSEEP 569
Query: 168 -----EAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLW 222
E VL + + + + F+ N I+PGT FM RL +++ ++ L+
Sbjct: 570 KPLTPENYVLRKSKIDGYDNIS----FNPNYISPGTDFMTRLDNEIKNWIALQT------ 619
Query: 223 KDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIML 282
L W D V+ SG PGEGEHKI D IR + + H +YGLDADL++L
Sbjct: 620 ----HLGTWGDCYVVYSGTNVPGEGEHKIYDLIRKVTTLDRKTRLESHLVYGLDADLMIL 675
Query: 283 GLCTHEPYFSLLREE-----------------------VKFNTKSNKGGSQIVTPEETKF 319
L T +LREE V F++K + + F
Sbjct: 676 SLITKMSKMYILREEKDSTPHVLAKIKPDPYYAKDTGLVHFHSK------DYIGLKSDNF 729
Query: 320 FLLHLSLMR--------DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPN 371
+L + +R +Y+ +F K K+ L+ + + DD+ L+ F GNDF+P+
Sbjct: 730 EVLSMRKLRAGMYNRCVNYVNTKF-KPKDSAFLTKKGTPARLTDDFALLSFFAGNDFLPH 788
Query: 372 LPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYA 431
LP++ + + + L Y +LP +G++ G ++ +R + + ++ + + F+ K A
Sbjct: 789 LPNVDLKDSSFTDLINTYYSLLPKFNGFLTHGLKIHTRRLQSLMKAISPNEAKYFKIK-A 847
Query: 432 DIQYL-EGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYS 490
+++ + E ++ +++EK +D + I+ +DY +G L+
Sbjct: 848 EVESVPEFADSSGYAKFYYEEKCG-IDYNDKRAIRKMCEDYIEGLFWNLS---------- 896
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVS 550
YYH + C W+ Y Y+
Sbjct: 897 --------------------YYH----------------SGC----PSWDWCYKYH---- 912
Query: 551 WSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQ----- 605
YAP SD+ S +++ + G P P + LLAV P + ELLP Y+
Sbjct: 913 --------YAPLASDLARVSSISVTFYKGNPITPLEHLLAVTPPSGNELLPPRYRFVIFH 964
Query: 606 ---NLMTLENSP---ILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLL 659
+L L + P + EY+PE+F +GK+ +WE V +PF++ KL K +V
Sbjct: 965 SACSLFRLLSEPKGELCEYFPEDFEICQDGKEHEWEYTVKLPFLNTRKLSKIARSV---- 1020
Query: 660 TDEERSRNRHGPMLVYTYS 678
DE R + +L Y +S
Sbjct: 1021 NDELEYRTLYRFVLYYLFS 1039
Score = 74.7 bits (182), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Query: 2 GVPKFFRYISERYPCLSEVVREYQIPE-FDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
GVP+ + ++ E + + + ++ + D Y+DMN +IH+ +H N P I ++Q
Sbjct: 441 GVPRLYSWMIENFYGMRKPLKSSDLENGVDYFYVDMNALIHSATHGNIY-PVVTIEDQQR 499
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 106
+ I + F++++P+K+ ++A+DGV P AK+NQQR RRFR K
Sbjct: 500 MKRITAALLNTFKLVKPRKVMYIAVDGVCPSAKINQQRTRRFRLCK 545
>gi|307106569|gb|EFN54814.1| hypothetical protein CHLNCDRAFT_24310, partial [Chlorella
variabilis]
Length = 326
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/260 (42%), Positives = 147/260 (56%), Gaps = 47/260 (18%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEV-------LEQKAKE 178
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFR+A+EAE L + +
Sbjct: 82 FDYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAQEAEEREKEEEKLRDEFAK 141
Query: 179 KGERLPTEKR--FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCV 236
+G ++P ++ FDSN ITPGTPFM RL L+Y++ L++ D W+ + V
Sbjct: 142 QGIKVPKKESAVFDSNVITPGTPFMHRLSVALQYYIHLRLNADP---------GWRGIKV 192
Query: 237 ILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLRE 296
ILS +PGEGEHKIM YIR + P Y+PN RHC+YGLDADLIML L THEP F++LRE
Sbjct: 193 ILSDANSPGEGEHKIMAYIREQRGLPGYSPNTRHCIYGLDADLIMLALATHEPRFAILRE 252
Query: 297 -----------------EVKFNTKSNKG---GSQIVTPEETKFFLLHLSLMRDYLELEFG 336
+ G G V + +F L + ++R+YLE +
Sbjct: 253 VGCWQGWGAGRGGVGCWGARAGRDGGAGMQVGGMWVAKKPYQFLL--VGVLREYLERDL- 309
Query: 337 KLKEPGVLSFPFSIENIIDD 356
++ P FP+ E + DD
Sbjct: 310 RVHTP----FPWDKERVYDD 325
Score = 117 bits (293), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 79/121 (65%), Gaps = 21/121 (17%)
Query: 1 MGVPKFFRYISERYPCLS--------EVVREYQIP-----------EFDNLYLDMNGIIH 41
MGVP ++R++S+RYP + +V+ ++P EFDNLYLDMNGIIH
Sbjct: 1 MGVPSYYRWLSQRYPKVVKDVVEDEVQVINGVEVPVDTSQPNPNGLEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C HP D TE+++F +F YI+ LF +++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCFHPEDRPAP--TTEQEVFTTMFDYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 F 102
F
Sbjct: 119 F 119
>gi|84998436|ref|XP_953939.1| 5'-3' exoribonuclease (XRN2, DHM1 ) [Theileria annulata]
gi|65304937|emb|CAI73262.1| 5'-3' exoribonuclease (XRN2, DHM1 homologue), putative [Theileria
annulata]
Length = 619
Score = 174 bits (442), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 178/692 (25%), Positives = 278/692 (40%), Gaps = 200/692 (28%)
Query: 2 GVPKFFRYISERYPCLSEVVREYQIPE-FDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
GVP+ + ++ E + + + + +I + D Y+DMN +IH+ +H N
Sbjct: 79 GVPRLYGWMMENFSRVRIPLDDSEISKGVDYFYVDMNAVIHSATHGN------------- 125
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKM-NQQRGRRFRSAKEAEVLEQKAKEKG 119
+ P M +QQR RR +A
Sbjct: 126 ---------------------------IFPILMMEDQQRMRRIVAAL------------- 145
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-------EVL 172
T PKK+ ++ +DGV P AK+NQQR RRFR K + +V
Sbjct: 146 ----------LNTFNLVKPKKMMYIGVDGVCPSAKINQQRTRRFRLYKSSNSDNEYYKVE 195
Query: 173 EQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSL 228
+ K K K +L F+ + I+PGT FM + ++R ++ L+
Sbjct: 196 DGKMKYKVNKLKIGAYDNVSFNPSYISPGTQFMSMMDSEIRNWIALQNYEG--------- 246
Query: 229 WVWKDVCVILSGHETPGEGEHKIMDYIRYM-KSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
W D ++ +G + PGEGEHKI D IR M + PD N H +YGLDADL+ML L T
Sbjct: 247 -TWNDCYIVYNGTDVPGEGEHKIYDTIRKMLELDPDVR-NSTHLVYGLDADLVMLSLITK 304
Query: 288 EPYFSLLREEVKFNTK-----------SNKGG------SQIVTPEETKFFLLHLSLMRDY 330
P +LREE + S K G + + + +L ++L+R
Sbjct: 305 LPKMYILREEYSYTPHILSKEKPDPYYSKKTGLLHIHGKDFIDLKSNNYEVLSMNLLRKT 364
Query: 331 LELEF----GKLKEP--GVLSFPFSIENIIDDWVLMGFLIG-NDFIPNLPDLHIINGALP 383
+ G +K L P + + DD+ L+ F+ G NDF+P+LP + + N +
Sbjct: 365 MYSRCMSISGSVKNDLNRFLFIPNAKNRLTDDFSLLSFMAGRNDFLPHLPSVELCNSSFN 424
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKK 443
L +Y K L KL F ++ + +Q L ++ KK
Sbjct: 425 DLINMYY----------------------KMLPKLRGFLTLNYKINMSRLQLLMKELCKK 462
Query: 444 FSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSE 503
D F K KS + DY D + Y +YYY ++ + +
Sbjct: 463 EFDYF-KMKS----------VSEKISDYSDPKK-------YAKYYYENKCD-------ID 497
Query: 504 FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYI 563
F K IR + C Y +HYAP +
Sbjct: 498 FNNKKA------------------------IRKM----------C------YKYHYAPLV 517
Query: 564 SDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEF 623
SD+ S +K+ GEP P + LLA+ P + +LLP Y++L + S + +Y+PE+F
Sbjct: 518 SDLAKISGTTIKFYKGEPITPLEHLLAITPPNNSQLLPPVYRSLSGPDGS-LCQYFPEDF 576
Query: 624 ATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
+GK +WE VV +PF+D L + +V
Sbjct: 577 EICQDGKDNEWEHVVKLPFLDTKHLCQVARSV 608
>gi|358389627|gb|EHK27219.1| hypothetical protein TRIVIDRAFT_207716 [Trichoderma virens Gv29-8]
Length = 904
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 99/134 (73%), Gaps = 11/134 (8%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKKLFFMAIDGVAPRAKMNQQR RRFR+A +AE +KA +G LP E+ FDSNCITPG
Sbjct: 43 PKKLFFMAIDGVAPRAKMNQQRARRFRTALDAEKAREKAIREGIELPKEEPFDSNCITPG 102
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC-VILSGHETPGEGEHKIMDYIR 256
T FM +L QQLRYFV K++ D W+ C ++LSGHE PGEGEHKIM+YIR
Sbjct: 103 TEFMAKLSQQLRYFVNKKVSEDTDWQG----------CDIVLSGHEVPGEGEHKIMEYIR 152
Query: 257 YMKSKPDYNPNMRH 270
K++P+Y+PN R+
Sbjct: 153 NAKAQPNYDPNARN 166
Score = 155 bits (391), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 165/637 (25%), Positives = 287/637 (45%), Gaps = 64/637 (10%)
Query: 633 DWEA--VVL----IPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NVN-LGT 684
DW+ +VL +P E K+++ + + + +RN G + +TYS VN +
Sbjct: 126 DWQGCDIVLSGHEVPGEGEHKIMEYIRNAKAQPNYDPNARNGFGVPIKFTYSPEVNFVYP 185
Query: 685 ALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGLCQD--VNLKLYVTHFPTLKH 738
+ P FP + +E +I+ PN + GL +N+K + FPTL
Sbjct: 186 SPLPGIFPEVQYCRCIE------NIFDLPNVEGLEYVSGLTNGALINIKA-LAGFPTLHT 238
Query: 739 VQFTHK-IENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIR 797
+ ++ + +E A V VFQQ SRN S+I+ ++ + LGK F+ YP L E +
Sbjct: 239 LPYSAQLVEGAGVNVFQQDSRNPSVIVTLTDTEMRTKVGTWKSKLGKRCFVGYPFLQEAK 298
Query: 798 VQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKS--ITDGYYTKLGVDIGNTEVLV 855
V V + +N + + + +DA +K++ + + + +LG+ +G E LV
Sbjct: 299 VIKVQDELFTYELAENEQDIITKDHSN-RDAADYAKEAEFLENWHAKRLGITVGQVECLV 357
Query: 856 YGQPVESRKYFFGPRGKV-TQQRTFIRSTV-------TYAYQSAVLNLQQARESLEYK-- 905
+ + +G + T++ I+ YA Q+ V + E +
Sbjct: 358 HVHML---------KGLIRTEEGALIKEYAENPSLRKVYAAQTIVEEVVNEDERFIERPA 408
Query: 906 -TIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDT 964
I+E F G + F L YG V+ V + + + +S +EP+++ + Q +
Sbjct: 409 LPIEEEFPQGTRAFFLGEFAYGRPLEVMGHVNGKANIV-VSVPKNKEPEITKQMIFQAER 467
Query: 965 VYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFT 1024
Y PS+ +A KL I PL+LS+ T S +I S N+KF + +V+G++
Sbjct: 468 NNPYTPSFAIAKKLGIHPLILSKITSSFQVISSAGLKLNLGL---NLKFEGRKLKVLGYS 524
Query: 1025 RRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVF--PHQGEQRVAQ 1082
R+ ET W ++ Q V LI YM FP+ F ++ D++ P QR+
Sbjct: 525 RKSET--GWEFSNQAVKLIAEYMVAFPDFFAAIQREPQKSETYETDLWNDPSVAPQRIKD 582
Query: 1083 IVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLYIPKPT 1142
IV+WLK+Q +K E P A +D++VV + A + + + T + +P+
Sbjct: 583 IVAWLKKQETSKFERVPLDAEQLDSEVVMALAKAGEQLHQASLEATAKTLNS---VPRTA 639
Query: 1143 L----DKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKP 1198
L D + FKL DRV + VP+ RGT+ GI + T+ + DVV+D P
Sbjct: 640 LLKPADAEMVLGNQSFKLGDRVTFVAAAGKVPIATRGTVAGISR--TATAVLLDVVWDVP 697
Query: 1199 FPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNS 1233
F G + R RG + + ++N + + + +S
Sbjct: 698 FMSGTTLGERAPMFRGQTVSSSTVLNTTNWQVVSASS 734
>gi|357610537|gb|EHJ67026.1| putative 5-3 exoribonuclease 1 [Danaus plexippus]
Length = 770
Score = 170 bits (430), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 163/295 (55%), Gaps = 9/295 (3%)
Query: 645 EVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPL 704
+ L+ AM LT+EE RN HGPMLVY ++ +LG ++P+YFP+I ENHAVEK +
Sbjct: 22 QTNLLSAMSPCYQRLTEEELKRNSHGPMLVYNWTADSLGPIISPEYFPSIKENHAVEKAV 81
Query: 705 YRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESII- 763
+R ++ V + L++G+ D + + FPT++H+++ I+ KVKVF QPSRNE+++
Sbjct: 82 WRHELDVPLHLLKRGMLPDADKDVLYPGFPTMRHLKYKTSIKKCKVKVFDQPSRNENMML 141
Query: 764 -IVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVF---- 818
IV P+L+++A +ILG+ +++ +PHL +V +++ + R+ ++ N P
Sbjct: 142 QIVPTATTDPALEELAAKILGQVVWVGWPHLTRAKVLSISNEKIRLHYN-NQNPELPYTT 200
Query: 819 ERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRT 878
E ++ + + +I + +LG+++G+ +V+++ + KY + +
Sbjct: 201 EHNTGNLHQQWISERSTIIEHNMNRLGIELGDVKVIIHAVNLRGYKYVIQDGSCMVMEDQ 260
Query: 879 FIRSTVTYAYQSAVLNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVIS 933
+ YA+Q+ V ++Y+T E + PG F L+ Y GC+ +
Sbjct: 261 WCSVPCGYAWQAVVCGALAPSAPVKYRTPLEAYPPGDHVFLLTMGQY--YGCIAT 313
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 93/175 (53%), Gaps = 15/175 (8%)
Query: 1076 GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDT----CEKVEKQITLFV 1131
G+ +V I +WLK QPH+ A R CG+ ++ + + + + ++T + EK +TL V
Sbjct: 322 GKNKVQDIAAWLKSQPHSSAPRRECGSEALEPEEMRALYNTLETQIRDLKDKEKNVTLHV 381
Query: 1132 KPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQ---GET--- 1185
K + LY + + PD ++++DRVV + TVPLG +GTI I Q G T
Sbjct: 382 KWSLLYKCELHEGNIQPDVKADYRMYDRVVCVASNITVPLGSKGTITAIYQPSNGNTVRL 441
Query: 1186 ----SYDAMYDVVFDKPFPHGVKIRC-SESRGYRMPAQAMINLSYGERLCGNSNP 1235
+ Y V+FD+PFP +K E+R YRM ++N+SYG +L S P
Sbjct: 442 SDKLNASPSYQVMFDEPFPGAMKEDLFEEARFYRMQPAHILNISYGRKLRTASEP 496
>gi|393910764|gb|EJD76029.1| CBR-XRN-2 protein [Loa loa]
Length = 764
Score = 170 bits (430), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 140/251 (55%), Gaps = 35/251 (13%)
Query: 201 MCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKS 260
M RL LRY+V ++ +D W+ V VILS PGEGEHKIMD+IR ++
Sbjct: 1 MARLAVALRYYVHQRLNSDP---------GWEKVAVILSDANVPGEGEHKIMDFIRRQRA 51
Query: 261 KPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTK-----SNKGGSQI---- 311
P ++PN HCL G DADLIMLGL THEP F+++REE N + + G +
Sbjct: 52 SPSHDPNTVHCLCGADADLIMLGLATHEPNFNIIREEFMPNQQRPCDLCGQYGHDLNDCK 111
Query: 312 -----------VTP--EETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWV 358
+P +ET F + L ++R+YLE E L P S PF +E IDDWV
Sbjct: 112 GLALDDDSECQSSPLQKETNFIFVRLPVLREYLERE---LHIPNS-SIPFDLERAIDDWV 167
Query: 359 LMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
M F +GNDF+P+LP L I A+ L K+Y++++ + G++ + G ++++R + L KL
Sbjct: 168 FMCFFVGNDFLPHLPSLEIRENAIDRLVKLYKDMVYEMKGHLTDSGVVHIERAQIILNKL 227
Query: 419 ASFDFEQFREK 429
+ E F+ +
Sbjct: 228 GEVEDEIFKSR 238
Score = 154 bits (388), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 101/183 (55%), Gaps = 2/183 (1%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCV 549
S EDE + E G K YY K R A Y+ + W LHYYY GC
Sbjct: 327 SSEDEVFDEVRLWEDGW-KDRYYKSKFQVDGKDIVFRRKVALAYVEGLCWVLHYYYQGCA 385
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYE-MGEPFLPFQQLLAVLPAASKELLPEPYQNLM 608
SW WYYP HYAP+ SD S + EPF P QQL++V PAAS+ LPE +Q LM
Sbjct: 386 SWDWYYPFHYAPFASDFDAVSQFKPDFSACTEPFKPLQQLMSVFPAASRVHLPEAWQELM 445
Query: 609 TLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
SPI+++YP+ F DLNGKK W+ V L+PF+DE +L++ + +E L E+ RN
Sbjct: 446 ISPTSPIIDFYPDNFVIDLNGKKCAWQGVALLPFVDEKRLLEVLKPMEDKLDAFEKERNS 505
Query: 669 HGP 671
GP
Sbjct: 506 RGP 508
>gi|358253113|dbj|GAA52094.1| 5'-3' exoribonuclease 2 [Clonorchis sinensis]
Length = 1234
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 137/267 (51%), Gaps = 33/267 (12%)
Query: 427 REKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEE 486
R+ I+ G +G +D K K+ D D DD D +EV +
Sbjct: 488 RKPRLSIEQKRGLLGGVGADAVMKSLPKDSDYD--------QDDVADANDEVRLW----- 534
Query: 487 YYYSDEDEEWRTNFF-SEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYY 545
++ WRT ++ S+FG D + + K Y + + W L YYY
Sbjct: 535 ------EDGWRTRYYQSKFGVDPADAPEFCIQVGKE-----------YAKGLCWVLAYYY 577
Query: 546 NGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEM--GEPFLPFQQLLAVLPAASKELLPEP 603
GC SW WY+P+HYAP+ SD L+ ++ +PF P +QL+ V PA S+ +P
Sbjct: 578 QGCASWDWYFPYHYAPFASDFIGIDQLDPGFDKVKTQPFRPLEQLMGVFPADSRSHVPPA 637
Query: 604 YQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEE 663
+Q LMT +SPI+++YP +F DLNGK+ W V L+PF+DEV+L+KA+D HLL+DEE
Sbjct: 638 WQTLMTDPDSPIIDFYPTDFKVDLNGKRYLWMGVALLPFVDEVRLLKALDERRHLLSDEE 697
Query: 664 RSRNRHGPMLVYTYSNVNLGTALAPDY 690
+RN GP ++ L +AL Y
Sbjct: 698 VARNIRGPDRLFCRDTHPLASALEALY 724
Score = 87.0 bits (214), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 69/114 (60%), Gaps = 4/114 (3%)
Query: 316 ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
+ F +HL+++R+YL + LK G L+F + +E +IDDWV M F +GNDF+P+LP L
Sbjct: 246 RSDFIFIHLNVLREYLAQD---LKLTG-LTFEWDLERVIDDWVFMCFFVGNDFLPHLPSL 301
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
I GA+ L ++Y+ + T G++ G +++ R + + +L + E F+ +
Sbjct: 302 EIREGAIDRLIEIYKSAVQTTGGWLTHSGKVHMDRVQLIMVELGKMEDEIFKNR 355
>gi|147771605|emb|CAN69284.1| hypothetical protein VITISV_028679 [Vitis vinifera]
Length = 321
Score = 168 bits (425), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 170/322 (52%), Gaps = 54/322 (16%)
Query: 110 VLEQKAKEKGERLPT-----EKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRR 162
++E + G RLP + FD+I F P++L +MAIDGVAPRAKMNQQR RR
Sbjct: 14 IVENGIPKIGLRLPPMNDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRR 73
Query: 163 FRSAKEAEV-------LEQKAKEKGERL-PTEK--RFDSNCITPGTPFMCRLHQQLRYFV 212
FR+AK+A L ++ + +G+ L P EK DSN ITPGT FM L L+Y++
Sbjct: 74 FRAAKDAAEAEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYI 133
Query: 213 KLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCL 272
++ + W T VILS PGEGEHKIM YIR ++ +NPN RHCL
Sbjct: 134 HSRLNRNPGWCSTK---------VILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCL 184
Query: 273 YGL-------DADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIV--TP-EETKFFLL 322
YGL + G H L E + G ++V TP + K+ L
Sbjct: 185 YGLMITPPGQQEKCYLCGQVGH------LAAECR--------GIEVVDDTPIHKKKYQFL 230
Query: 323 HLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGAL 382
++ ++R+YL+ + L P F + E ++DD+V + F +GNDF+P++P L I GA+
Sbjct: 231 NIWVLREYLQYDLEILNPP----FEINFERLLDDFVFLCFFVGNDFLPHMPTLEIREGAI 286
Query: 383 PLLYKVYQEVLPTLDGYINEGG 404
LL VY+ + GY+ + G
Sbjct: 287 NLLMHVYRREFSAMGGYLTDAG 308
Score = 69.7 bits (169), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 38/44 (86%)
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFR 103
+F+ IF YI+ LF +++P++L +MAIDGVAPRAKMNQQR RRFR
Sbjct: 32 VFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 75
>gi|321466088|gb|EFX77085.1| hypothetical protein DAPPUDRAFT_24169 [Daphnia pulex]
Length = 288
Score = 167 bits (424), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 146/285 (51%), Gaps = 45/285 (15%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+KL ++A+DGVAPRAK QQR RRF +K P + FD NC++PG
Sbjct: 49 PRKLLYVALDGVAPRAKRTQQRIRRFGRSK----------------PNQDEFDGNCVSPG 92
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FMC L + L +V K++ D WK++ VI S PGEGEHKI D+IR
Sbjct: 93 TSFMCTLSKNLMLYVDRKLSNDP---------QWKNISVIFSDSNVPGEGEHKIADFIRQ 143
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
+++P ++P +H + G DADLI+LGL +HE +LLR + P
Sbjct: 144 QRTQPCHDPVTKHVICGNDADLILLGLASHETNVTLLRGD----------------PNSR 187
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
K+ + + ++R+ L EF P F + +E I+DDW+ + L+GNDF+P+
Sbjct: 188 KWIFVGIHILRECLNEEFRGSDFP----FDYHLERIVDDWIFLCILLGNDFLPSFQIFKN 243
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFD 422
+ L L ++ ++ ++ G +N + + +++L +
Sbjct: 244 PDRTLTHLVRICKDAYNKNQDWLTHNGSINSVQVKHIMSELGRME 288
Score = 75.5 bits (184), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 56/83 (67%), Gaps = 9/83 (10%)
Query: 28 EFDNLYLDMNGIIHNCSHP----NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFM 83
E+DNLY+D+N I+HNC N +D E++I + +F I+ +F +++P+KL ++
Sbjct: 1 EYDNLYIDLNEIVHNCVRAARFHNADD-----RERRIMEILFEKIDQIFSIVRPRKLLYV 55
Query: 84 AIDGVAPRAKMNQQRGRRFRSAK 106
A+DGVAPRAK QQR RRF +K
Sbjct: 56 ALDGVAPRAKRTQQRIRRFGRSK 78
>gi|321466089|gb|EFX77086.1| hypothetical protein DAPPUDRAFT_31800 [Daphnia pulex]
Length = 288
Score = 167 bits (424), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 48/312 (15%)
Query: 113 QKAKEKGERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAE 170
KA ++ ER E F+ I F P+KL ++A+DGVAPRAK QQR RRF +K
Sbjct: 23 HKADDR-ERRIMEILFEKIDQIFSIVRPRKLLYVALDGVAPRAKRTQQRIRRFGRSK--- 78
Query: 171 VLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWV 230
P + FD NC++PGT FMC L + L +V K++ D
Sbjct: 79 -------------PNQDEFDGNCVSPGTSFMCTLSKNLMLYVDRKLSNDP---------Q 116
Query: 231 WKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPY 290
WK++ VI S PGEGEHKI D+IR +++P ++P +H + G DADLI+LGL +HE
Sbjct: 117 WKNISVIFSDSNVPGEGEHKIADFIRQQRTQPCHDPVTKHVICGNDADLILLGLASHETN 176
Query: 291 FSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSI 350
+LLR + P K+ + + ++R+ L EF P F + +
Sbjct: 177 VTLLRGD----------------PNSRKWIFVGIHILRECLNEEFRGSDFP----FDYHL 216
Query: 351 ENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKR 410
E I+DDW+ + L+GNDF+P+ + L L ++ ++ ++ G +N +
Sbjct: 217 ERIVDDWIFLCILLGNDFLPSFQIFKNPDRTLTHLVRICKDAYNKNQDWLTHNGSINSVQ 276
Query: 411 FEKFLTKLASFD 422
+ +++L +
Sbjct: 277 VKHIMSELGRME 288
Score = 74.3 bits (181), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%), Gaps = 11/84 (13%)
Query: 28 EFDNLYLDMNGIIHNCS-----HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFF 82
++DNLY+D+N I+HNC H D+ E++I + +F I+ +F +++P+KL +
Sbjct: 1 DYDNLYIDLNEIVHNCVRAARFHKADD------RERRIMEILFEKIDQIFSIVRPRKLLY 54
Query: 83 MAIDGVAPRAKMNQQRGRRFRSAK 106
+A+DGVAPRAK QQR RRF +K
Sbjct: 55 VALDGVAPRAKRTQQRIRRFGRSK 78
>gi|302828800|ref|XP_002945967.1| hypothetical protein VOLCADRAFT_115887 [Volvox carteri f.
nagariensis]
gi|300268782|gb|EFJ52962.1| hypothetical protein VOLCADRAFT_115887 [Volvox carteri f.
nagariensis]
Length = 229
Score = 167 bits (422), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/184 (49%), Positives = 112/184 (60%), Gaps = 40/184 (21%)
Query: 126 KRFDFI--TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERL 183
K FD++ ++ P+KL FMAIDGVAPRAKMNQQR RRF+SA E RL
Sbjct: 63 KVFDYLEKLIQIVRPQKLLFMAIDGVAPRAKMNQQRSRRFKSAME-------------RL 109
Query: 184 PTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHET 243
FM RL + LR+F++ K+ D LW+ V+ SGHE
Sbjct: 110 K---------------FMARLGKHLRFFIRRKMAEDPLWQKP---------TVVFSGHEV 145
Query: 244 PGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTK 303
PGEGEHKIM+YIR+ K +P Y PN RHC+YGLDADLIML L +HEP+F LLRE V + T
Sbjct: 146 PGEGEHKIMEYIRWDKRQPTYAPNQRHCMYGLDADLIMLSLVSHEPHFCLLREVVSY-TG 204
Query: 304 SNKG 307
SN+G
Sbjct: 205 SNRG 208
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 83/108 (76%), Gaps = 2/108 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIP-EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MG+PKF+R++SERYP L++ + + P E DNLYLDMNGIIHNC+H N D +TE+
Sbjct: 1 MGIPKFYRWLSERYPLLNQKLTLTEGPPEIDNLYLDMNGIIHNCTHANRKDVG-NVTEED 59
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE 107
+ +F Y+E L ++++P+KL FMAIDGVAPRAKMNQQR RRF+SA E
Sbjct: 60 MMLKVFDYLEKLIQIVRPQKLLFMAIDGVAPRAKMNQQRSRRFKSAME 107
>gi|145552342|ref|XP_001461847.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429683|emb|CAK94474.1| unnamed protein product [Paramecium tetraurelia]
Length = 351
Score = 166 bits (421), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 167/272 (61%), Gaps = 18/272 (6%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P++L F+A DGVAPRAKMNQQR RRF+S K + L ++ G + + +N +PG
Sbjct: 66 PQQLLFLAFDGVAPRAKMNQQRQRRFQSQKRYKYLSAHLQQIG-LFQKNETYKNNQFSPG 124
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L+QQ++++++ K + D +K++ +I SG + PGEGEHK++ +IR
Sbjct: 125 TEFMTQLNQQIKFYIERKYSEDP---------KFKNLKIIFSGCDVPGEGEHKLLSFIRN 175
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
M+ ++PN H +YG DADLIMLGL T ++RE++KF ++ ++++ E
Sbjct: 176 MQ----FDPNSVHMIYGADADLIMLGLLTQLKNVLIIREDLKFKQTASAAANRVIKIPE- 230
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F ++++S++R+YL+LEF LK+ + + I IIDD++L+ F +GNDF+P + I
Sbjct: 231 -FLVINISIVREYLDLEFAVLKDK--MKVAYDIHRIIDDFILLCFFVGNDFLPRIYCFDI 287
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLK 409
G + L ++++ L + YI + G +N K
Sbjct: 288 RIGTIEPLVDLFKKHLTNANDYIVQRGDINYK 319
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 25/102 (24%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEK-- 58
MGVP F+ +++E+ D YLDMN II+ C+ DP ++
Sbjct: 1 MGVPNFYSWVNEK--------------RVDYFYLDMNQIIYKCA----TDPSVLFKDQLR 42
Query: 59 -----QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
++ I +Y++++ ++ P++L F+A DGVAPRAKMN
Sbjct: 43 ERDFDDVWVSIINYLDMIINLVNPQQLLFLAFDGVAPRAKMN 84
>gi|324502945|gb|ADY41287.1| 5'-3' exoribonuclease 2 [Ascaris suum]
Length = 578
Score = 166 bits (421), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 111/193 (57%), Gaps = 10/193 (5%)
Query: 485 EEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYY 544
EE Y DE W T + K YY K + A Y+ + W L YY
Sbjct: 143 EEVY--DEVRLWETGW-------KERYYRSKFEVDGNDIAFRHKVAWAYVEGLCWVLKYY 193
Query: 545 YNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEM-GEPFLPFQQLLAVLPAASKELLPEP 603
Y GCVSW+WY+P+HYAP+ SD S + EPF P +QL+AV PAASK+ LPE
Sbjct: 194 YQGCVSWNWYFPYHYAPFASDFDTISQFKPDFSAHTEPFKPLEQLMAVFPAASKKHLPES 253
Query: 604 YQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEE 663
+Q+LMT E SPI+++YPE+F DLNGKK W+ V L+PF+DE +L++ + V L D E
Sbjct: 254 WQDLMTSEESPIIDFYPEDFQVDLNGKKYAWQGVALLPFVDEHRLLETLATVYDKLDDFE 313
Query: 664 RSRNRHGPMLVYT 676
R RN GP ++
Sbjct: 314 RERNSRGPDRIFV 326
>gi|242070073|ref|XP_002450313.1| hypothetical protein SORBIDRAFT_05g003583 [Sorghum bicolor]
gi|241936156|gb|EES09301.1| hypothetical protein SORBIDRAFT_05g003583 [Sorghum bicolor]
Length = 555
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 203/440 (46%), Gaps = 83/440 (18%)
Query: 270 HCLYGLDADLIMLGLCTHEPYFSLLREEVK---------------FNTKSNKGGSQIVTP 314
HCLYGLDADLIML L +HE +FS+LRE+V F T+ + + P
Sbjct: 2 HCLYGLDADLIMLALASHELHFSILREDVLRSTQPENCIPLSKELFKTEDSSRKCRGWFP 61
Query: 315 EETK------------FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGF 362
T+ + L++ ++R+YLEL+ K+ P V + IE +IDD++ + F
Sbjct: 62 RMTETTASRDRSPKKPYQFLNIWVLREYLELDL-KIPNPVVKT---DIERLIDDFIFICF 117
Query: 363 LIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFD 422
L GNDFIP++P + I GA+ LL +VY++ + GYI KR ++ L + A+
Sbjct: 118 LTGNDFIPHIPSVEIHEGAIDLLLEVYKQAFNKMGGYIVSTE----KRLQRNLVRRAA-- 171
Query: 423 FEQFREKYAD-----------IQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDY 471
E+++E+ D G ++ + E+ +L ++ D
Sbjct: 172 -EEWKERNYDNMEENPDGPDLTVKSSSTNGGICTNSQVTANTLELRRNLKDTLRNKQDLV 230
Query: 472 DDGTEE----VLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLR 527
G + L +A ++ ++ ++ ++N E G+ K D + N++L
Sbjct: 231 KSGACKHDAIRLGFAGWKSRFFREKFGVEKSN---EVGKLKNDMVM--IFSCLCANKILI 285
Query: 528 DQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQ 587
+ Y+ + W L YY+ SWSWYYP +YAP+ SD + SH
Sbjct: 286 PVVQKYLEGLCWVLRYYFADVPSWSWYYPFYYAPFTSDFEGLSH---------------- 329
Query: 588 LLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVK 647
LP+ Y+ LM E S I ++YP + D +GK+ W+ + ++PFIDE
Sbjct: 330 ---------SCALPKCYRELMENEESLIKKFYPSDLQIDTHGKRFLWQGIAMLPFIDEKL 380
Query: 648 LIKAMDAVEHLLTDEERSRN 667
L A VE L E +RN
Sbjct: 381 LTSATKTVEDKLAVHEINRN 400
>gi|303277183|ref|XP_003057885.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460542|gb|EEH57836.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 398
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 116/183 (63%), Gaps = 21/183 (11%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEV-------LEQKAKE 178
FD+I F P+KL +MAIDGVAPRAKMNQQR RRFR+A+EA+ L + +
Sbjct: 54 FDYIDRLFAMIRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAQEAQEKEEEEEKLRETLRA 113
Query: 179 KGERLPTEKR---FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVC 235
+G ++P + + FDSN ITPGTPFM RL L+Y+V ++ TD W+ V
Sbjct: 114 EGVKVPDKVKSEAFDSNVITPGTPFMGRLSAALQYYVHQRLNTDP---------GWRGVK 164
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VI+S PGEGEHK M YIR + ++PN RH +YGLDADLIML L THEP F +LR
Sbjct: 165 VIMSDASVPGEGEHKAMHYIRQQRGLNGFDPNTRHVVYGLDADLIMLALATHEPNFHILR 224
Query: 296 EEV 298
E V
Sbjct: 225 EVV 227
Score = 109 bits (272), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 60/76 (78%), Gaps = 2/76 (2%)
Query: 28 EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDG 87
EFDNLYLDMNGIIH C HP D TE+++F+ IF YI+ LF MI+P+KL +MAIDG
Sbjct: 19 EFDNLYLDMNGIIHPCFHPEDRPAP--TTEEEVFECIFDYIDRLFAMIRPRKLLYMAIDG 76
Query: 88 VAPRAKMNQQRGRRFR 103
VAPRAKMNQQR RRFR
Sbjct: 77 VAPRAKMNQQRSRRFR 92
>gi|357472639|ref|XP_003606604.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355507659|gb|AES88801.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 909
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 4/163 (2%)
Query: 508 KTDYYHYKLDYAKVTNEVL---RDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYIS 564
K YY K AK E++ +D Y + W +HYYY G SW W+YP+HYAP+ S
Sbjct: 370 KERYYEEKFS-AKTPEELVAIRKDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 428
Query: 565 DIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFA 624
D+K S LN+ +E+G PF PF QL+ V PAAS LPE Y+ LMT +SPI+++YP +F
Sbjct: 429 DLKGLSELNINFELGAPFKPFDQLIGVFPAASSHALPETYRKLMTDPSSPIIDFYPIDFE 488
Query: 625 TDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
D+NGK+ W+ + +PFIDE +L+ A+ +E+ LT EE+ RN
Sbjct: 489 VDMNGKRFAWQGIAKLPFIDETRLLAAVQKIENFLTPEEKRRN 531
Score = 156 bits (395), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 130/254 (51%), Gaps = 41/254 (16%)
Query: 201 MCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKS 260
M L L+Y++ L++ D WK++ VILS PGEGEHKI YIR ++
Sbjct: 1 MAVLSVALQYYIHLRLNNDP---------GWKNIKVILSDANVPGEGEHKITSYIRLQRN 51
Query: 261 KPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV---------------------- 298
Y+PN +HCLYGLDADLIMLGL THE +FS+LRE V
Sbjct: 52 LKGYDPNTQHCLYGLDADLIMLGLATHEIHFSILREVVFTPGQDKCFLCGQMGHMAAECE 111
Query: 299 ---KFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIID 355
K T KG + + + F L++ +R+YLE E P F E I+D
Sbjct: 112 GKAKRKTDDEKGDAIVA---KLPFQFLNIWTLREYLEYEMRIPNSP----FEIDFECILD 164
Query: 356 DWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFL 415
D++ + F +GNDF+P++P L I GA+ L VY+ L GY+ G NL R E F+
Sbjct: 165 DFIFICFFVGNDFLPHMPTLDIREGAIDSLMTVYKNEFTKLGGYLTNGSKPNLSRVEHFI 224
Query: 416 TKLASFDFEQFREK 429
+ S + E F+++
Sbjct: 225 QAVGSHEDEIFQKR 238
>gi|385303536|gb|EIF47602.1| 5 -3 exoribonuclease 1 [Dekkera bruxellensis AWRI1499]
Length = 174
Score = 164 bits (416), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 99/129 (76%), Gaps = 1/129 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+PKFFR+ISER+P S+ V ++ EFDN+YLDMN I+HNC+H ND ++E+Q+
Sbjct: 1 MGIPKFFRFISERWPLTSQEVDGQEMIEFDNMYLDMNSILHNCTHTNDGTI-IHLSEEQM 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F IF YI+ LF +I+PKK+F+MAIDGVAPRAKMNQQR RRFRSA EAE +KA E+G+
Sbjct: 60 FGAIFAYIDHLFNLIKPKKVFYMAIDGVAPRAKMNQQRARRFRSAVEAEXNMKKAIERGD 119
Query: 121 RLPTEKRFD 129
+P E FD
Sbjct: 120 EIPKEAPFD 128
Score = 116 bits (291), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 67/86 (77%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKK+F+MAIDGVAPRAKMNQQR RRFRSA EAE +KA E+G+ +P E FDSN ITPG
Sbjct: 76 PKKVFYMAIDGVAPRAKMNQQRARRFRSAVEAEXNMKKAIERGDEIPKEAPFDSNAITPG 135
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWK 223
T FM ++ + L+Y++ K++TD W+
Sbjct: 136 TDFMAKVTEHLKYYINQKVSTDSNWQ 161
>gi|449482933|ref|XP_004156447.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
Length = 685
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 111/173 (64%), Gaps = 3/173 (1%)
Query: 507 HKTDYYHYKLDYAKVTN--EVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYIS 564
+K YY K + A N E+ +D Y+ + W YYY+G SW WYYP+HY+P+ S
Sbjct: 169 YKERYYAEKFN-ANPANIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFAS 227
Query: 565 DIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFA 624
D+K+ + L + + +GEPF PF QL+ LPAAS LPE Y+NLMT +SPILE+YP +F
Sbjct: 228 DLKNLADLEITFFIGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDPSSPILEFYPSDFE 287
Query: 625 TDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
D+NGK+ W+ V +PFIDE KL+ +E LTDEE++RN ++YT+
Sbjct: 288 IDMNGKRFQWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSVMLDMLYTH 340
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
K+ L++ ++R+YL+ E P F + E I+DD+V + F +GNDF+P++P L I
Sbjct: 51 KYQFLNIWVLREYLQYELDIPNPP----FEINFERIVDDFVFLCFFVGNDFLPHMPTLEI 106
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGG 404
GA+ LL +Y++ P + GY+ + G
Sbjct: 107 REGAINLLMHIYRKEFPAIGGYLTDAG 133
>gi|326488040|dbj|BAJ89859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 164 bits (415), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 109/192 (56%), Gaps = 11/192 (5%)
Query: 477 EVLNYANYEEYYYSDEDEEWRTNFFSE-FGQHKTDYYHYKLDYAKVTNEVLRDQAECYIR 535
++ N N EE + WR ++ + FG + E+ RD Y
Sbjct: 11 DLFNSENPEEDKIKLGEPGWRERYYEDKFGARTPE----------QIEEIRRDVVLKYTE 60
Query: 536 AIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAA 595
+ W +HYYY G SW W+YP+HYAP+ SD+K LN+ +E+G PF PF QL+ V PAA
Sbjct: 61 GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKGLGQLNITFELGSPFKPFDQLMGVFPAA 120
Query: 596 SKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
S LP Y+ LMT +SPI+++YP +F D+NGK+ W+ + +PFIDE +L+ + V
Sbjct: 121 SSHALPVQYRQLMTDPSSPIIDFYPIDFEVDMNGKRFSWQGIAKLPFIDEDRLLSEIKKV 180
Query: 656 EHLLTDEERSRN 667
EH LT EE RN
Sbjct: 181 EHTLTPEEARRN 192
>gi|70926599|ref|XP_735814.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56509808|emb|CAH84865.1| hypothetical protein PC301271.00.0 [Plasmodium chabaudi chabaudi]
Length = 260
Score = 164 bits (414), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 117/192 (60%), Gaps = 22/192 (11%)
Query: 122 LPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 181
L E+ FD I P+KL +MAIDGVAP+AKMNQQR RRF+S +E+ ++ E
Sbjct: 6 LYIERLFDIIE-----PQKLLYMAIDGVAPKAKMNQQRSRRFKSILASEIEKRAYIELRN 60
Query: 182 RLPTEKR--------FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKD 233
+ +E R +DSN ITPGT FM L L+YF++ KIT D+ WK
Sbjct: 61 KFLSENRNVPDEYNHWDSNIITPGTQFMHELSIALKYFIEHKITNDE---------KWKK 111
Query: 234 VCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSL 293
+ VI S GEGEHKI ++I+ +++ Y+PN RH ++G+DADLIML L +HEPYF +
Sbjct: 112 IVVIFSDANVCGEGEHKIYNFIKSQRAQKGYDPNTRHVIHGMDADLIMLSLASHEPYFYI 171
Query: 294 LREEVKFNTKSN 305
LRE + + K +
Sbjct: 172 LREIINLDQKED 183
Score = 74.3 bits (181), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F +IF YIE LF +I+P+KL +MAIDGVAP+AKMNQQR RRF+S +E+ ++ E
Sbjct: 1 FLNIFLYIERLFDIIEPQKLLYMAIDGVAPKAKMNQQRSRRFKSILASEIEKRAYIELRN 60
Query: 121 RLPTEKR 127
+ +E R
Sbjct: 61 KFLSENR 67
>gi|109287937|ref|YP_654631.1| hypothetical protein MIV059L [Invertebrate iridescent virus 3]
gi|123808652|sp|Q197A1.1|EX0N_IIV3 RecName: Full=Putative exonuclease 059L
gi|106073560|gb|ABF82089.1| hypothetical protein MIV059L [Aedes taeniorhynchus iridescent
virus]
Length = 560
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 140/547 (25%), Positives = 245/547 (44%), Gaps = 114/547 (20%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P++L + IDGVAP +K QQR RRF + K T+ FDSNCI+PG
Sbjct: 97 PRELV-LCIDGVAPVSKQIQQRQRRFITHK-----------------TDGGFDSNCISPG 138
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T F+ +L L+ ++ K+ +K W + +++ + PGEGEHK+ D++R
Sbjct: 139 TEFLFQLGLYLKTHLESKL--EKEWLNVSTIYFMDSL--------VPGEGEHKLFDFLRT 188
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPY-----FSLLREEVKFNTKSNKGGSQIV 312
+++ + + G DADLIML L + S+LRE++
Sbjct: 189 HQTRI-VDTKFNIVVVGNDADLIMLSLLVSVLFIKENPLSILREDL-------------- 233
Query: 313 TPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
T ++ + L+ ++L++D + + K P+ E +I D+V+M F+IGNDF+P++
Sbjct: 234 TSKKLDYLLVDINLLKDTIYQNASRDKPRFT---PYDFEFVICDFVVMCFMIGNDFLPSV 290
Query: 373 PDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
P +I +G L +L K Y GY+ + KF + E+ + +
Sbjct: 291 PLFNIYDGGLDMLLKY----------YFTTAGYITCRSVSKFYGRNKGKKMEKIKINFKH 340
Query: 433 IQ----YLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYY 488
+Q Y+ + + + + + L ++K E +L
Sbjct: 341 LQPYLHYIATAVNPQAIEHYRNRNYGYPNVLLDVVLKK---------EAMLT-------- 383
Query: 489 YSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNG- 547
E+ T++ + H +++ + Y+ I+W +YY G
Sbjct: 384 -----EDVTTHYLKAYSPH---------------HKITKSLVHSYLEEIKWIFNYYAYGA 423
Query: 548 -CVSWSWYYPHHYAPYISDIKDFSHLNLKYEMG----EPFL--PFQQLLAVLPAASKELL 600
C+ W+ YYP +AP D+ F+ L + G + L PF QLL +LP S +LL
Sbjct: 424 VCIDWNMYYPSQFAPTALDLS-FATLTFTSQSGLKERKKCLTDPFFQLLCILPPHSSDLL 482
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P+P L+ +++ +P E D +GK +WEA+ ++P +D K++K + H +
Sbjct: 483 PDPLNKLLV---QKLVDGHPIEIKMDYDGKLNEWEAIPILPPLDYNKILKMYNDHIHQCS 539
Query: 661 DEERSRN 667
E+ RN
Sbjct: 540 KEDLKRN 546
Score = 49.7 bits (117), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 27/129 (20%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDN---------LYLDMNGIIHNCSH------ 45
MG+ FFR+ + +P V +Y L LD+NGIIH
Sbjct: 1 MGIKYFFRWYKDSFP---NTVTKYSTKNHKKSQDTDEPFLLLLDLNGIIHTSCQKIYKYG 57
Query: 46 ---PND---NDPHFRITEKQI--FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQ 97
P + P EK + ++D+ I+ L +++P++L + IDGVAP +K QQ
Sbjct: 58 SFEPKNLLKKSPPVYKGEKDVLVYEDVLASIDSLVALVEPRELV-LCIDGVAPVSKQIQQ 116
Query: 98 RGRRFRSAK 106
R RRF + K
Sbjct: 117 RQRRFITHK 125
>gi|195338779|ref|XP_002036001.1| GM16250 [Drosophila sechellia]
gi|194129881|gb|EDW51924.1| GM16250 [Drosophila sechellia]
Length = 431
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 103/169 (60%), Gaps = 1/169 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D A + A Y+R + W L YYY GC SW+WY+P+HYAP+ SD
Sbjct: 24 KDRYYESKFDVAPGNQQFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPYHYAPFASDFV 83
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ L+ +E G +PF P +QL+ V PAAS +PEP+ LM+ SPI+++YPE+F D
Sbjct: 84 NIQGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKLMSDPESPIIDFYPEDFKID 143
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
LNGKK W+ V L+PF+DE +L KA+ LT EE RN+ G +Y
Sbjct: 144 LNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEEVKRNKRGDNYLY 192
>gi|343424057|emb|CCD17964.1| 5'-3' exonuclease, putative [Trypanosoma vivax Y486]
Length = 996
Score = 160 bits (406), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 158/339 (46%), Gaps = 48/339 (14%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRIT-EKQ 59
MGVPKF ++ +YP +VV LY+D+NG+IH C H ++NDP + E +
Sbjct: 1 MGVPKFASWLRNKYP---DVVSNNCPTSVHGLYVDLNGLIHPCCH-SENDPSIALLPEGE 56
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSA-------------- 105
+ I + +E+L ++P+++ ++A+DGVAPRAKMNQQR RR+ S
Sbjct: 57 KLECICYEVELLVETVRPQEVLYIAVDGVAPRAKMNQQRARRYMSRAVPARADKSPSRAS 116
Query: 106 -----KEAEVLEQKAKEKGERLPTEKRFDFITLK-FCFPKKLFFMAIDGVAPRAKMNQQR 159
+ A+V+E+ +E E D ++ L+ + +
Sbjct: 117 HAKNNRCADVVEEVVREFTSDEIAEANNDLNEVRNLLLQDSLYGQPVPDASVGGNTTVFV 176
Query: 160 GRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTD 219
R S + +E FDSNCI+PGT FM ++ ++ ++ +T+D
Sbjct: 177 PRSDTSTADISAVE---------------FDSNCISPGTAFMSKVADKVLAMLQRNMTSD 221
Query: 220 KLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADL 279
W +CVI S TPGEGE KI+D++R S P +N H + GLDADL
Sbjct: 222 DS--------KWSRLCVIFSDSRTPGEGEQKIIDFLRTQSSYPGFNGRGSHVIVGLDADL 273
Query: 280 IMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETK 318
I L L H P ++LR+ + K Q P K
Sbjct: 274 IFLALSLHIPGVTILRDTTRNPHKRRAAAQQQRGPRSGK 312
Score = 100 bits (248), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 137/328 (41%), Gaps = 51/328 (15%)
Query: 348 FSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY-QEVLPTLDGYINEGGYL 406
F+ +IDD +L+ L+GNDFIP+LP AL ++Y +VLP G+L
Sbjct: 463 FANSKVIDDIILIAMLMGNDFIPHLPSAFCGESALDNFLELYVTDVLPY--------GFL 514
Query: 407 NLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKA 466
+ +E L +L + E YA I+ + + K +D + +E
Sbjct: 515 TIDSYEISLPQL-----RRLLESYAKIEAVLFRRHKLLADADQNVRREE---------AG 560
Query: 467 TDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVL 526
T DG +++ + E S D WR + S G +E +
Sbjct: 561 TGTGVSDG--DLMTVSRAAEPLNSSVDVGWRNAYLSTTG----------------LSERV 602
Query: 527 RDQAECYIRAIQWNLHYYYNGC-VSWSWYYPHHYAPYISDIK------DFSHL-NLKYEM 578
+ E Y+ +++ YY + WSWYYP H+ P D+ D L +
Sbjct: 603 HEACEAYVNGLRFVWRYYTSSSGTCWSWYYPFHHGPLALDMAAYLQSCDVGRLPPVSNPA 662
Query: 579 GEPFLPFQQLLAVLPAASKELLPEPYQNLMT--LENSPILEYYPEEFATDLNGKKQDWEA 636
EP Q+L V P S LLP + M ++ + +P+ ++ D + + A
Sbjct: 663 TEPPNTLLQMLCVFPPTSHALLPAILGSAMLEKYKSQQLSSSFPKSWSVDYHDSNEKHLA 722
Query: 637 VVLIPFIDEVKLIKAMDAVEHLLTDEER 664
+ +IPF D +L +DA E LT+EER
Sbjct: 723 IAMIPFADVRELQPLVDAAEPHLTEEER 750
>gi|449531061|ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
Length = 254
Score = 160 bits (404), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 159/309 (51%), Gaps = 68/309 (22%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MGVP F+R++++RYP +++VV E + + ++ S PN N F
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPID-----VSKPNPNGMEF----DN 51
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
++ D+ I F +G P A + F+S
Sbjct: 52 LYLDMNGIIHPCFHP-----------EGKPPPATYDAV----FKSI-------------- 82
Query: 120 ERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEV------ 171
FD+I F P+K+ +MAIDGVAPRAKMNQQR RRFR+AK+A
Sbjct: 83 --------FDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRFRAAKDAAEAEAEEE 134
Query: 172 -LEQKAKEKGERL-PTEK--RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLS 227
L ++ + +G+ L P EK DSN ITPGT FM L L+Y+ + ++ + W+ T
Sbjct: 135 RLRKEFEAEGQTLLPKEKPETCDSNVITPGTEFMGVLSVALQYYAQSRLNHNPGWRFT-- 192
Query: 228 LWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTH 287
VILS PGEGEHKIM YIR ++ P ++PN RHCLYGLDADLIML L TH
Sbjct: 193 -------KVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATH 245
Query: 288 EPYFSLLRE 296
E +FS+LRE
Sbjct: 246 EVHFSILRE 254
>gi|68068571|ref|XP_676196.1| exoribonuclease [Plasmodium berghei strain ANKA]
gi|56495779|emb|CAH94068.1| exoribonuclease, putative [Plasmodium berghei]
Length = 1136
Score = 159 bits (403), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 151/301 (50%), Gaps = 75/301 (24%)
Query: 189 FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGE 248
+DSN ITPGT FM L L+YF++ KIT D+ WK + ++ +VC GEGE
Sbjct: 16 WDSNIITPGTQFMHELSVALKYFIEHKITNDEKWKKIVVIFSDANVC---------GEGE 66
Query: 249 HKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLRE------------ 296
HKI ++I+ +++ Y+PN RH ++G+DADLIML L +HEPYF +LRE
Sbjct: 67 HKIYNFIKSQRAQKGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIINLDPKEENKP 126
Query: 297 --------------EVKFNTK-------------SNKGGSQIVTPEETKFF--------- 320
++++ TK SNKG + + +
Sbjct: 127 QVKDNYVGVFKGKGDLQYCTKFLRNNNSTTIDGNSNKGKKKYCNKYNDRNYANINISSTC 186
Query: 321 -----------LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFI 369
+L L+++R+YL +F +++E IDD++ + FL GNDF+
Sbjct: 187 SINYENWNELQILDLTILREYLYKDF-------FFDAKYNLERCIDDFIFICFLCGNDFL 239
Query: 370 PNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
P+LP + I +G++ L +YQ+V P L Y+ G +N + F K+++ +A + E F +
Sbjct: 240 PHLPSISIASGSIDQLLLLYQKVFPVLGDYLINEGSMNFQSFIKYISFIAEVERETFVSQ 299
Query: 430 Y 430
Y
Sbjct: 300 Y 300
Score = 140 bits (353), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 105/176 (59%), Gaps = 5/176 (2%)
Query: 514 YKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISD--IKDFSH 571
+ LD +E +++ YI + W L YY+ C W WYYP++YAP SD IKD
Sbjct: 559 FHLDENDNVDEFVQEVVYKYIEGLAWVLCYYFQECPMWHWYYPYYYAPLSSDLLIKD--- 615
Query: 572 LNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKK 631
+N+ +E EP LPF+QLL VLP+ S LP+ Y+ LM SPI+++YP+ F + NGKK
Sbjct: 616 INISFEKDEPLLPFEQLLCVLPSNSSHCLPKMYRELMLKSESPIIDFYPKTFKEEENGKK 675
Query: 632 QDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALA 687
++ +VL+PF+++ ++I+ ++ LTDEE+ RNR G +Y S L +
Sbjct: 676 FKYQWIVLLPFVEKERIIRFARNLDDTLTDEEKKRNRRGLNKIYMSSTHTLSKKIT 731
>gi|402582266|gb|EJW76212.1| hypothetical protein WUBG_12878 [Wuchereria bancrofti]
Length = 410
Score = 159 bits (403), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 124/216 (57%), Gaps = 26/216 (12%)
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIMD+IR ++ P ++PN HCL G DADLIMLGL THEP F+++R
Sbjct: 6 VILSDANVPGEGEHKIMDFIRRQRASPSHDPNTVHCLCGADADLIMLGLATHEPNFNIIR 65
Query: 296 EEVKFNTK--------------------SNKGGSQIVTP--EETKFFLLHLSLMRDYLEL 333
EE N + S+ +P +ET F + L ++R+YLE
Sbjct: 66 EEFVPNQQRPCDLCGQYGHDLNDCKGLASDDNSECQSSPLQKETNFIFIRLPVLREYLER 125
Query: 334 EFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVL 393
E L P S PF +E IDDWV M F +GNDF+P+LP L I A+ L K+Y++++
Sbjct: 126 E---LHIPNC-SIPFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVKLYKDMV 181
Query: 394 PTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
+ G++ + G ++++R + L KL + E F+ +
Sbjct: 182 CEMKGHLTDSGIVHIERVQIILDKLGEVEDEIFKSR 217
Score = 49.3 bits (116), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 64 IFHYIEILFRMIQPKKLFFMAIDGVAPRAKM 94
IF YI+ LF +++P+KL +MAIDGVAPRAK+
Sbjct: 374 IFEYIDRLFAIVRPRKLLYMAIDGVAPRAKV 404
>gi|224587081|gb|ACN58600.1| 5-3 exoribonuclease 2 [Salmo salar]
Length = 575
Score = 157 bits (398), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D ++ + Y+ + W L YYY GC SW WY+P HYAP+ SD K
Sbjct: 133 KQRYYKTKFDVDATDDDFRKKVVMSYVEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFK 192
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
D + +E+G +PF P +QL+ V PAAS LPE +++LM+ S I+++YP++FA D
Sbjct: 193 DIKGMFTDFELGTKPFKPLEQLMGVFPAASGNFLPETWRSLMSNPESSIIDFYPDDFAID 252
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A+ V L+ EE RN G +++
Sbjct: 253 LNGKKYAWQGVALLPFVDERRLRAALAEVYPNLSPEENKRNSLGSDMLFV 302
>gi|260944866|ref|XP_002616731.1| hypothetical protein CLUG_03972 [Clavispora lusitaniae ATCC 42720]
gi|238850380|gb|EEQ39844.1| hypothetical protein CLUG_03972 [Clavispora lusitaniae ATCC 42720]
Length = 327
Score = 157 bits (398), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 136/227 (59%), Gaps = 32/227 (14%)
Query: 132 TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSA---------KEAEVLEQKAKEKG-- 180
L P+K+ +A+DGVAPRAKMNQQR RRFR+A KE ++ E +A+ +
Sbjct: 85 VLMMARPRKVLMIAVDGVAPRAKMNQQRARRFRAAQDARAAAEEKERQIREFEARGQAID 144
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
+ + +K +D+N ITPGTPFM L LRY+V K+ +D W+D+ VI+S
Sbjct: 145 DAIKGKKSWDTNAITPGTPFMDGLALALRYWVAHKLASDP---------GWRDLQVIVSD 195
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV-- 298
PGEGEHK+M +IR ++ P Y+ N RHC+YGLDADLI LGL THEP+F +LRE+V
Sbjct: 196 ATVPGEGEHKLMSFIRSQRADPQYDANTRHCIYGLDADLIFLGLATHEPHFRVLREDVFA 255
Query: 299 KFNTKSNKGGSQIVTPEETK----------FFLLHLSLMRDYLELEF 335
+ N + +T ++ F LH++++R+YLE+E
Sbjct: 256 QGNGRMRVADQLQITQDQRDAIAEQDAKKPFLWLHVNVLREYLEVEL 302
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 68/112 (60%), Gaps = 20/112 (17%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEF---------------DNLYLDMNGIIHNCS 44
MGVP FFR+IS +YP +S VV + P+F DNLYLDMNGI+H CS
Sbjct: 1 MGVPAFFRWISRKYPKIISPVVEDVGDPQFGRVPQYSDPNPNGELDNLYLDMNGIVHPCS 60
Query: 45 HPNDN-DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
HP P TE ++F D+F Y E + M +P+K+ +A+DGVAPRAKMN
Sbjct: 61 HPEHKPAPE---TEDEMFLDVFKYTERVLMMARPRKVLMIAVDGVAPRAKMN 109
>gi|13278447|gb|AAH04028.1| Xrn2 protein [Mus musculus]
gi|148696567|gb|EDL28514.1| 5'-3' exoribonuclease 2, isoform CRA_b [Mus musculus]
Length = 561
Score = 157 bits (397), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 127 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 186
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ ++ ++E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 187 GIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSSIIDFYPEDFAID 246
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 247 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVLFV 296
>gi|407400385|gb|EKF28636.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative,
partial [Trypanosoma cruzi marinkellei]
Length = 1026
Score = 157 bits (397), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 160/315 (50%), Gaps = 31/315 (9%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRIT-EKQ 59
MGVPKF +++++YP E+V + + LY+D+NG+IH C H ++ DP E++
Sbjct: 48 MGVPKFALWLTKKYP---EMVSDVIPADVHGLYIDLNGLIHPCCH-SERDPSVAARPEEE 103
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE-----AEVLEQK 114
Q I +E+L ++P + ++A DGVAPRAKMNQQR RR+ + + A ++E+
Sbjct: 104 KLQCICSEVEVLLATVRPHDILYIATDGVAPRAKMNQQRARRYMNRAKIMTSGAAIVEEV 163
Query: 115 AKEKGERLPTEKRFDFITLKFCFPKKLFFMAI----------DGVAPRA-KMNQQRGRRF 163
+E E D ++ + + + +GVA A +
Sbjct: 164 VREFTPNEMAEVDDDLDDIRQLLMQDALYGGVMFQEDTTETLNGVANIADTLTPVTPCND 223
Query: 164 RSAKEAEVLEQKAKEKGERLPTEK--RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+S + V AK G T + FDS+CI+PGT FM ++ + V+ K+ +
Sbjct: 224 KSQNDEIVAGASAKFDGRTDGTLEVTEFDSSCISPGTAFMAKVTNAILTLVQDKLANGEP 283
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
+W + V+ SG TPGEGEHKI+D++R S P +N H + GLDADL+
Sbjct: 284 --------LWAGLRVVFSGASTPGEGEHKIIDFLRTQSSYPGFNGKGAHVIVGLDADLVF 335
Query: 282 LGLCTHEPYFSLLRE 296
L L H P+ +LR+
Sbjct: 336 LSLSLHIPHIFILRD 350
Score = 92.0 bits (227), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 136/328 (41%), Gaps = 72/328 (21%)
Query: 353 IIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY-QEVLPTLDGYINEGGY-LNLKR 410
+IDD+++MG L+GNDF+P LP + L ++Y VLP G++ G + + L +
Sbjct: 519 VIDDFIVMGMLMGNDFLPRLPGAFCGESVMDNLLELYVSHVLPY--GFLTSGYHEIYLPQ 576
Query: 411 FEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD 470
++ L A + +FR +F+ +K+M P AA
Sbjct: 577 LQRLLRSYAKIETVKFR---------------RFA-----VSNKKMTPKEAA-------- 608
Query: 471 YDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQA 530
E YS DE+WR + + G L +
Sbjct: 609 ---------------EPLYSPLDEQWREPYLTSTGLAGN----------------LEEAC 637
Query: 531 ECYIRAIQWNLHYYYNGC--VSWSWYYPHHYAPYISDIKDF------SHLNLKYEMGEPF 582
+ Y+ +++ YY SWSWYYP H+AP+ DI D+ ++L P
Sbjct: 638 KKYVEGLRFVWRYYSGNASTCSWSWYYPFHHAPFALDIADYLQRCDLTNLPPPPLETTPP 697
Query: 583 LPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK-KQDWEAVVLIP 641
F QLL +LP S LLP ++M + E +P + D +D+ A VL+P
Sbjct: 698 DMFLQLLCILPPTSHALLPAVLGDVMLNPPEGLRETFPSMWRVDYTAAYGKDYLAEVLLP 757
Query: 642 FIDEVKLIKAMDAVEHLLTDEERSRNRH 669
F + +L + +++ T +E+ R R
Sbjct: 758 FANVSELCELVESSRPYFTKDEQERGRQ 785
>gi|62321273|dbj|BAD94484.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 157 bits (396), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 101/143 (70%)
Query: 541 LHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELL 600
+HYYY+G SW+W+YP+HYAP+ SD+K L++K+E+G PF PF QLLAVLP+AS L
Sbjct: 1 MHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHAL 60
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
PE Y++LMT +SPI ++YP +F D+NGK+ W+ + +PF++E +L++A VE LT
Sbjct: 61 PECYRSLMTNPDSPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLT 120
Query: 661 DEERSRNRHGPMLVYTYSNVNLG 683
+EE RN +++ ++ LG
Sbjct: 121 NEEIRRNSALFDMLFVVASHPLG 143
>gi|261328233|emb|CBH11210.1| 5'-3' exonuclease, putative [Trypanosoma brucei gambiense DAL972]
Length = 1036
Score = 156 bits (395), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 160/340 (47%), Gaps = 53/340 (15%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRIT-EKQ 59
MGVPKF ++ +YP +V + LY+D+NGIIH C H ND+D + E++
Sbjct: 1 MGVPKFASWLRNKYP---AIVTKNCPSSVHGLYIDLNGIIHPCCH-NDSDTAIALLPEEE 56
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS----AKEAEVLEQKA 115
+ I +E+L + +QPK++ ++A+DGVAPRAKMNQQR RR+ A+ EV
Sbjct: 57 KLECICSELELLVQTVQPKEVMYIAVDGVAPRAKMNQQRARRYMGRAAPAQTGEVASTYM 116
Query: 116 KEK-GERLPTEKRFDFITLKFC-------------FPKKLFFMAI--------------- 146
K G + E +F + + L+ A+
Sbjct: 117 PNKSGMAIVEEVVREFTSTEMAQANDDLDEVRQTLLEDPLYSGALYNEGEEEAGDALNDG 176
Query: 147 DGV----APRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERL---PTEKRFDSNCITPGTP 199
DGV + + R + +V++ +GE + PT FDSNCI+PGT
Sbjct: 177 DGVNSFCVRSTDDDYESTHENRYVESNQVVDDVFGHRGEVIVDDPTAFEFDSNCISPGTD 236
Query: 200 FMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMK 259
FM ++ + + K++ + W +CVI SG TPGEGEHKI+D++R
Sbjct: 237 FMAKVSDAVLNMLNEKMSGNDP--------TWTRLCVIFSGSNTPGEGEHKIIDFLRTQS 288
Query: 260 SKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK 299
S + H + GLDADLI L L H +LR+ +
Sbjct: 289 SLAQFGGKANHVIVGLDADLIFLALSLHITQVFILRDTTR 328
Score = 74.7 bits (182), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 139/328 (42%), Gaps = 54/328 (16%)
Query: 353 IIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY-QEVLPTLDGYINEGGY-LNLKR 410
IIDD +++ L+GNDF+P+ P AL L ++Y EVLP G++ +G + +NL +
Sbjct: 510 IIDDIIVLSILLGNDFLPHAPSAFSGESALDNLLELYVSEVLPY--GFLTKGPHEINLPQ 567
Query: 411 FEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD 470
++ A + +FR +F + K +KE A K +++D
Sbjct: 568 LQRLFEAYAKIEAVKFR---------------RF--LLFKSTNKENSNSGAEFRKGSNND 610
Query: 471 YDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQA 530
+ A+ +S D+ WR + G ++N V ++
Sbjct: 611 N-------VTVADVAVALHSTIDDRWRDTYLKSTG---------------LSNSV-QEAC 647
Query: 531 ECYIRAI--QWNLHYYYNGCVSWSWYYPHHYAPYISDI------KDFSHLNLKYEMGEPF 582
E Y+ + W + WSWYYP ++AP + D+ + + L P
Sbjct: 648 EKYVEGVCFVWRYYTTTTTDSDWSWYYPFYHAPPVIDLAIYLKEANIKRMPLPVVKSTPP 707
Query: 583 LPFQQLLAVLPAASKELLPEPYQNLMTL--ENSPILEYYPEEFATDLNGKKQDWEAVVLI 640
QLL++LP S LLP +M + + + +P ++ D + A V++
Sbjct: 708 DTLVQLLSILPPTSHALLPMVLGEVMVRSPQQAELESTFPLQWNVDYHDSNVVHLATVML 767
Query: 641 PFIDEVKLIKAMDAVEHLLTDEERSRNR 668
PF D L + +DA LT+EER R +
Sbjct: 768 PFADMDVLQQVVDAAWPQLTEEERWRTQ 795
>gi|148696568|gb|EDL28515.1| 5'-3' exoribonuclease 2, isoform CRA_c [Mus musculus]
Length = 725
Score = 156 bits (395), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 291 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 350
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ ++ ++E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 351 GIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSSIIDFYPEDFAID 410
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 411 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVLFV 460
Score = 95.1 bits (235), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 68/117 (58%), Gaps = 4/117 (3%)
Query: 316 ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
E +F L L+++R+YLE E L FPF +E IDDWV M F +GNDF+P+LP L
Sbjct: 72 EGEFIFLRLNVLREYLERELTM----ASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSL 127
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
I GA+ L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 128 EIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 184
>gi|290992973|ref|XP_002679108.1| 5'-3' exoribonuclease 1 [Naegleria gruberi]
gi|284092723|gb|EFC46364.1| 5'-3' exoribonuclease 1 [Naegleria gruberi]
Length = 968
Score = 156 bits (395), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 143/479 (29%), Positives = 206/479 (43%), Gaps = 124/479 (25%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPE------------FDNLYLDMNGIIHNCSHPN- 47
MGVP F ++ P E+++E IP D+LYLDMNGIIH N
Sbjct: 1 MGVPFLFSFLLSECP---EMIKEI-IPSSSASSSSNTTMTIDHLYLDMNGIIHTFKDTNL 56
Query: 48 --------------------DNDPHFRI---TEKQIFQDIFHYIEILFRMIQPKKLFFMA 84
N+ I EK IF + + E+++R +P K A
Sbjct: 57 QTKLLERLVSSSSSSSSSSSSNNEEVEIPMTMEKFIFSILLYLEEVIYRF-RPSKTLMFA 115
Query: 85 IDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFM 144
+DG AP AK+NQQR RR+ S L PK+
Sbjct: 116 LDGSAPCAKINQQRERRWVSFNNHSGL--------------------------PKRHHHH 149
Query: 145 AIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRL 204
G + + G R KE E L FDS IT GT FM L
Sbjct: 150 HQHGNHHGEQHDLHHGEENRKKKEDESL----------------FDSISITSGTSFMKEL 193
Query: 205 HQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDY 264
+ L++F+K K+ D W++ + +I S GEGEHKIM +IR ++ P+
Sbjct: 194 SEHLQFFIKRKLQDDPNWRNIEN--------IIFSDSSVFGEGEHKIMSHIRKVQQIPNR 245
Query: 265 NPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV------------------KFNTKSNK 306
+ +YG+D+DLI+L L THE +LR+ + F KSN
Sbjct: 246 KSE-KFMIYGMDSDLILLSLVTHEEDIYVLRDWMPSVSDSFNQVYSRWKVRRNFKKKSN- 303
Query: 307 GGSQIVTPE--ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLI 364
S+ V + + KF L+ +SL+R +E +++ S F + +IDD++LM F+
Sbjct: 304 SSSRTVDKDRFDHKFHLVEISLVRKLIE---KYMRQDLNSSIEFDLNRVIDDFILMLFVC 360
Query: 365 GNDFIPNLPDLHI--INGALPLLYKVYQEVLPTL--DGYI----NEGGYLNLKRFEKFL 415
GNDFI +LP L I AL L+KVY+ + T+ YI N +NL+R E F+
Sbjct: 361 GNDFISSLPTLDIGKDENALGYLFKVYRTLFSTVFKGCYITNSSNPSELINLERLETFM 419
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 508 KTDYYHYKLDY-----AKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
K +YY KL+ +K +R+ + Y++A+ W +YYY G SW + Y HYAP
Sbjct: 721 KVNYYSRKLNITYDSSSKGGGPQVRELVKEYLKAMYWTFYYYYFGVPSWEYSYNFHYAPA 780
Query: 563 ISDIKDFSHL--NLKYEMGEPFLPFQQLLAVLPAASKELLPE 602
SD + L + + G P P + LLAV+P +L+ E
Sbjct: 781 ASDFVNLKELFTEITFHKGLPLNPIESLLAVIPLHKIKLVHE 822
>gi|157817638|ref|NP_001102066.1| 5'-3' exoribonuclease 2 [Rattus norvegicus]
gi|149041187|gb|EDL95120.1| 5'-3' exoribonuclease 2 (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 561
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 127 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 186
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + ++E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 187 GIADMPSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSSIIDFYPEDFAID 246
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 247 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGSDVLFV 296
>gi|156086892|ref|XP_001610853.1| 5'-3' exonuclease [Babesia bovis T2Bo]
gi|154798106|gb|EDO07285.1| 5'-3' exonuclease, putative [Babesia bovis]
Length = 509
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 141/518 (27%), Positives = 222/518 (42%), Gaps = 120/518 (23%)
Query: 30 DNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVA 89
D+LY+DMN +IH +H N ++
Sbjct: 26 DHLYMDMNAVIHVATHGN----------------------------------------IS 45
Query: 90 PRAKM-NQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDG 148
P +M N+QR RR SA E FD + P+K+ +MA+DG
Sbjct: 46 PVVQMANEQRLRRITSA------------------IEMMFDIVR-----PRKMLYMAVDG 82
Query: 149 VAPRAKMNQQRGRRFRSAKE----AEVLEQKAKEKG-----ERLPTEK----RFDSNCIT 195
V P AK+NQQRGRRF ++K A++ + E G +RLP ++ F+ N I+
Sbjct: 83 VCPTAKINQQRGRRFLTSKNVDPLADICSAVSAEDGYTYIAKRLPFDEYDNVSFNPNYIS 142
Query: 196 PGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYI 255
PGT FM + ++ ++ LK T + + + V +G PGEGEHKI I
Sbjct: 143 PGTDFMKIVDSEISNWLALK-TEEGFFGKCM---------VTYNGVTVPGEGEHKIFQCI 192
Query: 256 RYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF--NTKSNKGGS---- 309
R M + H +YGLDADL+ML + P +LREE + + S K G
Sbjct: 193 RKMNKVCKRSRKDVHLVYGLDADLMMLSMAVKMPNIKVLREERNYAPHVVSKKKGEPYFS 252
Query: 310 -----------QIVTPEETKFFLLHLSLMR--------DYLELEFGKLKEPGVLSFPFSI 350
+ ++T F + L +R Y+ ++G L+ P +
Sbjct: 253 TDTGIVHLHKWDFIDLKKTHFEVASLHSLRKRMYERCWGYIMRKYGP-SSSSFLNRPEAP 311
Query: 351 ENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKR 410
I DD+VL+ FL GNDF+P LP + + N + + Y ++ G++ +G +++ R
Sbjct: 312 YRITDDFVLLSFLAGNDFLPRLPTVDLANDSFKQMLVTYYGLMHKWQGFLTDGSKIHVPR 371
Query: 411 FEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD 470
+ LA + E F+EK E K ++D +H+ K + D A +K D
Sbjct: 372 LQTLFKSLAKHEMEWFKEKGIIEGVPEYSDRKLYADYYHENKCQ---VDSKANVKKMCID 428
Query: 471 YDDGTEEVLNYANYE----EYYYSDEDEEWRTNFFSEF 504
Y G +L Y +++ ++ S E R F +EF
Sbjct: 429 YIKGLFWILIYYHHDCPSWDWKLSASTGELRQYFPTEF 466
>gi|7019942|dbj|BAA90934.1| unnamed protein product [Homo sapiens]
Length = 560
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 127 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 186
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 187 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 246
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 247 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 296
>gi|62913987|gb|AAH06417.2| XRN2 protein, partial [Homo sapiens]
Length = 580
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 147 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 206
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 207 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 266
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 267 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 316
>gi|355729458|gb|AES09874.1| 5'-3' exoribonuclease 1 [Mustela putorius furo]
Length = 154
Score = 155 bits (392), Expect = 2e-34, Method: Composition-based stats.
Identities = 71/121 (58%), Positives = 91/121 (75%), Gaps = 2/121 (1%)
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
LSLMR+Y++ EF LK+ +SF + IE IIDDW+LMGFL+GNDFIP+LP LHI + ALP
Sbjct: 1 LSLMREYIDYEFSVLKDK--ISFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDALP 58
Query: 384 LLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKK 443
LLY Y +LP L GYINE G+LNL RFEK+L KL+ FD E F E + D+++ E K+G K
Sbjct: 59 LLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFESKVGNK 118
Query: 444 F 444
+
Sbjct: 119 Y 119
>gi|449687658|ref|XP_002169199.2| PREDICTED: 5'-3' exoribonuclease 1-like [Hydra magnipapillata]
Length = 354
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 152/268 (56%), Gaps = 18/268 (6%)
Query: 968 YLPSYTVASKLSISPLLLSRFTGSIFII-DSTEEGAKRHNIGLNIKFSRKNEEVVGFTRR 1026
Y+ S+++A ++ I +LSR TG +F+ S + G +N+GL IK+++KN E++G+ RR
Sbjct: 9 YVSSHSIAKQMQIPIDVLSRITGDVFVTKGSNQTGIMSYNLGLKIKYTKKNLEMLGYARR 68
Query: 1027 DETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDI--YLRDDVFPHQGEQRVAQIV 1084
+ WFY+ V L+ YMK+FPEVF L+ +S D+ + D+FP Q E + +
Sbjct: 69 --SAFGWFYSASAVNLLNEYMKKFPEVFRGLESMASSDVDSFNFSDLFPQQSEDYLDHVS 126
Query: 1085 SWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLF-VKPNKLYIPKPTL 1143
+LK P ++ C + V++ VV+ IE AV+ + +K+ F VKP L++P
Sbjct: 127 LYLKNLPCYDGQLIRCQSNVLEEPVVNRIEQAVNEIKDQQKKSFKFQVKPENLFLPT--- 183
Query: 1144 DKLCPDP-DTKFKLFDRVVNIRDCYTVPLGYRGTIIGI---VQGETSYDA----MYDVVF 1195
D L P D + LFDRVVNI++ VP G RGT+IGI + E S A Y+V+F
Sbjct: 184 DSLYNVPQDREIFLFDRVVNIQNGINVPFGMRGTVIGIHKVLIDENSIRAKSELRYEVLF 243
Query: 1196 DKPFPHGVKIRCSESRGYRMPAQAMINL 1223
D G +R + RGY + A ++I L
Sbjct: 244 DDVLL-GASVRSKDPRGYILKADSLIGL 270
>gi|444520441|gb|ELV12993.1| 5'-3' exoribonuclease 2 [Tupaia chinensis]
Length = 669
Score = 155 bits (391), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 298 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 357
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA D
Sbjct: 358 GIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAID 417
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT EE RN G +++
Sbjct: 418 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFV 467
Score = 91.7 bits (226), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
Query: 316 ETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDL 375
E +F L L+++R+YLE E L F F +E IDDWV M F +GNDF+P+LP L
Sbjct: 79 EGEFIFLRLNVLREYLERELTM----ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSL 134
Query: 376 HIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
I GA+ L +Y+ V+ GY+ E GY+NL+R + + + + F+++ D
Sbjct: 135 EIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD 191
Score = 55.1 bits (131), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 7/64 (10%)
Query: 168 EAEVLEQKAKE----KGERLPTEK---RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
EA V +Q+ +E KG LP E+ RFDSNCITPGT FM L + LRY++ ++ D
Sbjct: 2 EAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP 61
Query: 221 LWKD 224
WK+
Sbjct: 62 GWKN 65
>gi|399218119|emb|CCF75006.1| unnamed protein product [Babesia microti strain RI]
Length = 759
Score = 153 bits (386), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 163/668 (24%), Positives = 271/668 (40%), Gaps = 160/668 (23%)
Query: 2 GVPKFFRYISERYPCLSEVVREYQIPE-FDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
GVP+ + +I + P +++ + +I + D LYLD+NGI H +H N I + Q
Sbjct: 36 GVPRLYGWIMDTVPFVTKTLASSKIGKNIDCLYLDLNGIYHPATHGNV-PIQLDIGQSQR 94
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F+ IF I ++ +I+PKKL ++A DGV P AK+NQQR RR RS+ + +Q E
Sbjct: 95 FKRIFTAISNIYSIIKPKKLLYLASDGVCPAAKINQQRTRRNRSSI-GNIQDQINPE--- 150
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
RF A + +Q LE G
Sbjct: 151 ------RF------------------------ANIQKQ-------------LETVLSSCG 167
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
+ + + F N I+PGT F+ L +LR ++ LK++ + + V+ SG
Sbjct: 168 DNRTSTQPFTPNMISPGTEFIVTLENELRKWLFLKVSEG----------FFGNCDVVFSG 217
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE--- 297
+ PGEGEHKI I+ + +YGLDADL++L T +LRE+
Sbjct: 218 SDVPGEGEHKIFQSIKSAS-------RLSSMVYGLDADLMLLASLTQGNKCIILREKRGY 270
Query: 298 ---VKFNTKSN---KGGSQIVTPEETKFFLLHLSLMRDYLELE---------FGKL--KE 340
V K N + +V + F L+L + + EL + +L K+
Sbjct: 271 TPHVAARRKPNPYYNSTTGLVHFHKRDF----LTLQKRHFELVNLKAVAMHFYNRLVTKD 326
Query: 341 PGVLSFPFSIENIID----DWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTL 396
+++ S ++ ++ D+V + FL GNDF+P +P + + + + Y + +
Sbjct: 327 KKKINYNGSEDDFVNSLTRDFVFLTFLAGNDFLPRVPAVDLADESFTPFILSYFKNFDQI 386
Query: 397 DGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEM 456
G+I G ++ RF+KFL ++F+ FR + + E +++ ++K K
Sbjct: 387 GGFITNGDSYSISRFKKFLEFPSTFEQNWFRLRGLKLGIAEFTTN-EYAKYYYKIKFGVD 445
Query: 457 DPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKL 516
D IK +DY G ++ +YY+ W ++ + TD YK
Sbjct: 446 VTDQPEFIKGLVNDYLTG-------LHWNMFYYNRSYSCWNWSYKHHYAPLLTDMCKYKY 498
Query: 517 DYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKY 576
+ K + NG
Sbjct: 499 KFNK---------------------QMFKNG----------------------------- 508
Query: 577 EMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEA 636
+P LL+V P LLPE +++ L +Y+P + D +G +WE
Sbjct: 509 ---KPVSQLTHLLSVCPPEDNYLLPEQLRDIDELN-----QYFPSDVEVDKDGYNNEWEY 560
Query: 637 VVLIPFID 644
VV +PFID
Sbjct: 561 VVKMPFID 568
>gi|395510133|ref|XP_003759335.1| PREDICTED: 5'-3' exoribonuclease 2-like, partial [Sarcophilus
harrisii]
Length = 349
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 99/170 (58%), Gaps = 1/170 (0%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIK 567
K YY K D + R + Y+ + W L YYY GC SW WYYP HYAP+ SD +
Sbjct: 47 KQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFE 106
Query: 568 DFSHLNLKYEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATD 626
+ + +E G PF P +QL+ V PAAS LP ++ LM+ S I+++YPE+FA D
Sbjct: 107 GIADMPSDFEKGTRPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPESSIIDFYPEDFAID 166
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYT 676
LNGKK W+ V L+PF+DE +L A++ V LT +E RN G +++
Sbjct: 167 LNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPDETRRNSLGGDVMFV 216
>gi|357289551|gb|AET72864.1| 5'-3' exoribonuclease [Phaeocystis globosa virus 12T]
gi|357292303|gb|AET73639.1| 5'-3' exoribonuclease [Phaeocystis globosa virus 14T]
Length = 526
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 236/524 (45%), Gaps = 100/524 (19%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P K +A DGV P AK+NQQ+ RR++++ ++ + + +D+ ITPG
Sbjct: 74 PTKNIILAFDGVPPFAKLNQQKNRRYKTSYQSTLFSKNVP-----------WDTTAITPG 122
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +L+ L+ K ++ L ILS + PGEGEHK+ +++R
Sbjct: 123 TEFMDKLNDTLKNHFGDKYKSNNL---------------ILSLTDIPGEGEHKLFEFVR- 166
Query: 258 MKSKPDYNPNMRH---CLYGLDADLIMLGLCTHEPY---FSLLREEVKFNTKSNKGGSQI 311
N N +H +YG+D+DLIML L H+ Y L RE F + +
Sbjct: 167 -------NNNHKHDNTVIYGMDSDLIMLSL-NHKKYTNSIYLYRETPHFISSLDS----- 213
Query: 312 VTPEETKFFLLHLSLMRDYL-ELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIP 370
T + K + + ++ + D + L K +P S + N I D++L+ FL+GNDF
Sbjct: 214 -TLDPAKEYFIDINHLADQIYHLLTDKTFDPEKQSIE-AYYNKISDYILICFLLGNDFNE 271
Query: 371 NLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+ P +++ N + +L +Y+E+ I +G +N F+K++ KLA+ + + +E Y
Sbjct: 272 HFPAINLRNNGITILLDLYREIFGVSQNIIKDGE-INWVNFKKYIFKLANNEHQFIKENY 330
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYS 490
K+ + S F+ E + E L T ++ E+ +N
Sbjct: 331 --------KIRDRLSKKFYPETTDEE----KELKFNTTPSWERNIEQFIN---------- 368
Query: 491 DEDEEWRTNFFSEFGQHKTDYYH--YKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGC 548
++ W+ YYH + +D K TN L Y+ +QW +YY C
Sbjct: 369 PHEKHWQYR-----------YYHSLFHIDTDKDTN-ALASVCNNYLMTLQWTFYYYSRDC 416
Query: 549 VSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQ-------LLA-VLPAASKELL 600
VSW Y +HY P + D+ + N+ Y E +P + LLA VLP S L+
Sbjct: 417 VSWKHSYQYHYPPLLEDL----YKNIPYFNSELVIPVDKSIIHPHLLLAYVLPRNSLNLI 472
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFID 644
P + ++N P ++Y E+F + WE V+ P ID
Sbjct: 473 PNTKISRFLIKNYP--DHYKEDFKFQYAFCRYFWEGHVMFPEID 514
Score = 58.2 bits (139), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPN--DNDPHFRITEK 58
MG+P +F + + + V+ I NLY+D N II++ + N F E
Sbjct: 1 MGIPYYFANLIRTHKKI--VIDLSSIGNIQNLYIDSNSIIYDAIDFSLFQNKSQF---EN 55
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA 115
I Q + IE++ I+P K +A DGV P AK+NQQ+ RR++++ ++ + +
Sbjct: 56 HIIQTVIDKIELIITTIKPTKNIILAFDGVPPFAKLNQQKNRRYKTSYQSTLFSKNV 112
>gi|402588112|gb|EJW82046.1| hypothetical protein WUBG_07043 [Wuchereria bancrofti]
Length = 442
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 100/183 (54%), Gaps = 2/183 (1%)
Query: 490 SDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCV 549
S EDE + E G K YY K R A Y+ + W LHYYY GC
Sbjct: 10 SSEDEAFDEVRLWEDGW-KDRYYKSKFQVDGKDIVFRRKVALAYVEGLCWVLHYYYQGCA 68
Query: 550 SWSWYYPHHYAPYISDIKDFSHLNLKYEM-GEPFLPFQQLLAVLPAASKELLPEPYQNLM 608
SW WYYP HYAP+ SD S + EPF P QQL+ V PAAS+ LPE +Q LM
Sbjct: 69 SWDWYYPFHYAPFASDFDAVSQFKPDFSAYTEPFKPLQQLMGVFPAASRMHLPEAWQELM 128
Query: 609 TLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNR 668
SPI+++YP+ F DLNGKK W+ V L+PF+DE +L++ + +E L E+ RN
Sbjct: 129 ISPVSPIIDFYPDNFVIDLNGKKCAWQGVALLPFVDEKRLLEVLKPMEDKLDAFEKERNS 188
Query: 669 HGP 671
GP
Sbjct: 189 RGP 191
>gi|312371115|gb|EFR19375.1| hypothetical protein AND_22596 [Anopheles darlingi]
Length = 1169
Score = 152 bits (383), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 164/345 (47%), Gaps = 37/345 (10%)
Query: 910 IFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYL 969
IF C+ GC+ + I+ F V +EP++ ++ + ++ Y
Sbjct: 8 IFLRATDCY----------GCMGEVADISDKRIQGKFLVYEEPEVREVFQMHKQSLQGYR 57
Query: 970 PSYTVASKLSISPLLLSRFTGSIFIIDSTE-----EGAKRHNIGLNIKFSRKNEEVVGFT 1024
A+KL IS +L + TG+I + E K NIGL ++ KNE VGF
Sbjct: 58 SPNDTAAKLGISVSVLLQLTGTILVAHGGHRSLNIENEKTVNIGLRLRMMSKNEAAVGFC 117
Query: 1025 RRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIV 1084
RR + W ++++ V L++ Y + P +F L+ S ++++ D+F E ++ ++
Sbjct: 118 RRLHN-RTWVFSDRTVNLLQRYDEYAPGLFEKLEG-SRNNVHFESDLFGEGNEGKLDELH 175
Query: 1085 SWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQI----TLFVKPNKLYIPK 1140
WLKEQ H +AE R C +++ + + VD E +KQI T+ V P L P
Sbjct: 176 KWLKEQEHNEAERRSCSIELLERNAIERLVTLVD--EHNDKQIPRVRTMLVPPKDLLRPG 233
Query: 1141 PTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGI--------VQGET--SYDAM 1190
K DP+ F+L DRVV + P+G RGTIIGI V+ E D
Sbjct: 234 MKKAKTL-DPNAHFELLDRVVVASEAEDAPVGRRGTIIGIHKVTDPNPVRREAIGQEDNY 292
Query: 1191 YDVVFDKPFPHGVKI---RCSESRGYRMPAQAMINLSYGERLCGN 1232
Y+V+FD FP GV + +E R RM A++N+SYG G+
Sbjct: 293 YEVLFDHSFPKGVSVYGLVGTEKRVQRMAQGALLNISYGRASNGH 337
>gi|403221200|dbj|BAM39333.1| 5'-3' exoribonuclease 1 [Theileria orientalis strain Shintoku]
Length = 642
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 214/504 (42%), Gaps = 132/504 (26%)
Query: 2 GVPKFFRYISERYPCLSEVVREYQI-PEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
GVP+ + ++ E + + +++ I + D Y+DMN +IH +H N
Sbjct: 88 GVPRLYGWMMENFSKMRIPLQDSDIYGKVDYFYVDMNAVIHAATHGN------------- 134
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKM-NQQRGRRFRSAKEAEVLEQKAKEKG 119
V+P M +QQR RR +A +L+
Sbjct: 135 ---------------------------VSPSLMMEDQQRMRRIVTA----LLK------- 156
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA---------E 170
K PKK+ ++ +DGV P AK+NQQR RRFR K +
Sbjct: 157 ------------IFKLVKPKKMMYIGVDGVCPSAKINQQRTRRFRLYKSTTKPGFKPYYK 204
Query: 171 VLEQKAKEKGERLPTEK----RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTL 226
E K + ++LP + FD + I+PGT FM + +LR ++ L+
Sbjct: 205 SEEGKYEYTVKKLPIQSYDNVSFDPSYISPGTEFMSMMDSELRNWIALQTYEG------- 257
Query: 227 SLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCT 286
W+D ++ SG + PGEGEHKI D IR M H +YGLDADL+ML L T
Sbjct: 258 ---TWEDRYIVYSGTDVPGEGEHKIYDAIRRMAECDPKVKQENHLVYGLDADLMMLSLIT 314
Query: 287 HEPYFSLLREEVKFNTKSNKGGSQIVTPEETK-FFLLHLSLMRDYLELEFGKLKEPGVLS 345
P +LRE K++ +K P +K LLH M DY++ K+ + VLS
Sbjct: 315 KMPNMYILRE--KYDHAPHKLAKIKPNPYYSKETGLLHFHGM-DYIDF---KISDYEVLS 368
Query: 346 FPF----------------------------SIENIIDDWVLMGFL---------IGNDF 368
F S + DD+ L+ FL +GNDF
Sbjct: 369 MRFLRRIMYSRCIRTSEAVSNDANKFLFNQNSRNRLTDDFSLLSFLAVDKLCTTNVGNDF 428
Query: 369 IPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFRE 428
+P+LP + + N + L Y ++LP G++ E +N+ R ++ + +L+ + + F++
Sbjct: 429 LPHLPTVELCNSSFNDLVNTYYKMLPKFRGFLTESYKINMSRLQQLMKELSKLEIKYFKQ 488
Query: 429 KYADIQYLEGKMGKKFSDVFHKEK 452
K + E KK++ +++ K
Sbjct: 489 KSTLEKISEFSDPKKYAKYYYENK 512
Score = 40.8 bits (94), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 617 EYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
EY+PE+F GK+ +WE VV +PF+D L K +V L +N+ G VY
Sbjct: 570 EYFPEDFEICEEGKENEWEHVVKLPFLDTRHLSKVARSVNDELKYTNLYKNKPGYTNVY 628
>gi|393238424|gb|EJD45961.1| hypothetical protein AURDEDRAFT_63788 [Auricularia delicata TFB-10046
SS5]
Length = 639
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 143/502 (28%), Positives = 233/502 (46%), Gaps = 54/502 (10%)
Query: 750 VKVFQQPSRNESIII-VQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRI 808
V VF SRN+S II ++++ + + +Q+A Q+LG+ F+ +P L E V VA DS+
Sbjct: 7 VNVFNSDSRNKSTIIHIENQYENKTAEQLAQQMLGRRAFLGWPFLHEGLV--VAISDSQY 64
Query: 809 SFDKNSGPVF-ERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFF 867
+ K G V R + + ++ + +T Y + GV +G+ +VLV +P++ +
Sbjct: 65 KYTKPQGQVVASRMQYEASNVWRRKVERLTHLYSKRFGVIVGDVDVLVQARPLKGLRR-- 122
Query: 868 GPRGKVTQQRTFIR----STVTYAYQSAVLNLQQARESLEYKT-----IDEIFYPGCQCF 918
T I+ + + A Q + + A E Y + E F G + F
Sbjct: 123 ------TASGALIKDYEDTEIEQAMQLVITKV--ASEDPRYLEKRPPPLSEEFPIGTRVF 174
Query: 919 ALSNPHYGSGGCVISTVKEENSFIKLSFKVQ-QEPDLSDLVHLQDDTVYNYLPSYTVASK 977
L YG+ V T S + + + +EPD + L Y PSY VA K
Sbjct: 175 FLGEHAYGTAAQVSETTDTTLSIMIAFIRTEAREPDRFKEI-LGTRIASRYFPSYIVAEK 233
Query: 978 LSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTE 1037
L++SPL LSR T + +I +G+K N+GL +KF K +V+ +TR++ T W +++
Sbjct: 234 LNMSPLALSRITSAFMVIGP--DGSKV-NLGLGLKFEAKGLKVMEYTRKEGRT--WEFSD 288
Query: 1038 QVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQG-EQRVAQIVSWLKEQ------ 1090
+ + LI+NY FPE+F L+ ++DD+ DVF + R+ + SWL +Q
Sbjct: 289 KAMQLIRNYKTMFPELFRSLEGRNNDDMLRAADVFKGADPDMRLREAKSWLSKQGVRDFE 348
Query: 1091 PHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLYIPKPTLDKLCPD- 1149
P A + + A+ + V IE D K K F K IP+ + L P
Sbjct: 349 PVALSCDQLDKASKPRLETVREIEKLADELTKA-KHAETFKKALVKGIPREAV--LLPAH 405
Query: 1150 -----PDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVK 1204
F L DRV + + VPL +G ++ + + DVV+D PF G
Sbjct: 406 AQYRLQTQSFSLGDRVTMVEETGGVPLSAKGVVVAL------NASSMDVVWDIPFMSGTT 459
Query: 1205 I--RCSESRGYRMPAQAMINLS 1224
+ RCS+ RG + + +NL+
Sbjct: 460 LHDRCSQYRGSTVSFSSCLNLT 481
>gi|297611272|ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
Length = 1601
Score = 150 bits (378), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 129/238 (54%), Gaps = 43/238 (18%)
Query: 230 VWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEP 289
+ + VILS PGEGEHKIM +IR + + Y+PN RHCLYGLDADLIML L +HE
Sbjct: 818 TYSEAIVILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHCLYGLDADLIMLALASHEV 877
Query: 290 YFSLLREEVKFNTKSNKGGSQIVTP------EETKFF----------------------- 320
+FS+LREEV ++N+ + +TP E KF
Sbjct: 878 HFSILREEVLH--QNNQENTIPITPKTFTSQEAEKFKCRAWFPRITEARPEGKLTKKPYQ 935
Query: 321 LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIING 380
L++ ++R+YLEL+ +K P + +E +IDD+V + FL GNDFIP++P L I G
Sbjct: 936 FLNIWVLREYLELD---MKIPNPIQ-TLDVERMIDDFVFICFLTGNDFIPHIPSLEIHEG 991
Query: 381 ALPLLYKVYQEVLPTLDGYI--------NEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
A+ LL +VY+ + GYI YL + R EKF +L+ ++ + F + Y
Sbjct: 992 AIDLLIEVYKTSFNKMGGYIVDTDKVKDKHAAYLKVSRLEKFFHELSLYEEKIFLKCY 1049
Score = 48.5 bits (114), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 600 LPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLL 659
LP Y LM + S I +YP E D +GK+ W+ + +PFI++ L+ E L
Sbjct: 1254 LPGCYSKLMDCDESAIQAFYPSELDIDTDGKRYLWQGIAKLPFIEDKLLLSVTKTAEKDL 1313
Query: 660 TDEERSRN 667
E RN
Sbjct: 1314 AVHELRRN 1321
>gi|413932822|gb|AFW67373.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 541
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 93/140 (66%)
Query: 529 QAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQL 588
Q + Y+ + W + YYY G SW W+YP+HYAP+ SD+K + L + + +G+PF PF QL
Sbjct: 17 QVQKYVEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKGLAELEITFFLGQPFKPFDQL 76
Query: 589 LAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKL 648
+ LPAAS LP+ Y +LM+ +SP+ +YP++F D+NGK+ W+ V +PFIDE +L
Sbjct: 77 MGTLPAASSNALPKYYGDLMSDPDSPLKSFYPKDFEIDMNGKRFAWQGVAKLPFIDERRL 136
Query: 649 IKAMDAVEHLLTDEERSRNR 668
+ +E LT+EE+ RNR
Sbjct: 137 LAETRKLEDTLTEEEKFRNR 156
>gi|238609845|ref|XP_002397575.1| hypothetical protein MPER_01971 [Moniliophthora perniciosa FA553]
gi|215472342|gb|EEB98505.1| hypothetical protein MPER_01971 [Moniliophthora perniciosa FA553]
Length = 150
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 94/142 (66%)
Query: 511 YYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFS 570
YY K E + + Y+ + W L YYY G SW WYYP+H+AP+ +D ++
Sbjct: 2 YYQQKFGVEYTDKEFRKKLTQSYVEGMSWVLCYYYQGTPSWQWYYPYHFAPFAADFEEVD 61
Query: 571 HLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+N+ +E+G+PF P++QL+ V PAAS++ +P+P+ +LMT E SPI+++YP F D+NGK
Sbjct: 62 EMNIHFEIGQPFKPYEQLMGVFPAASRKHIPDPFHHLMTEEESPIIDFYPSTFQVDMNGK 121
Query: 631 KQDWEAVVLIPFIDEVKLIKAM 652
K W+ + L+PFIDE +L+ +M
Sbjct: 122 KMAWQGIALLPFIDEKRLLDSM 143
>gi|62701868|gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gi|77548751|gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 127/232 (54%), Gaps = 43/232 (18%)
Query: 236 VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR 295
VILS PGEGEHKIM +IR + + Y+PN RHCLYGLDADLIML L +HE +FS+LR
Sbjct: 1535 VILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHCLYGLDADLIMLALASHEVHFSILR 1594
Query: 296 EEVKFNTKSNKGGSQIVTP------EETKFF-----------------------LLHLSL 326
EEV ++N+ + +TP E KF L++ +
Sbjct: 1595 EEVLH--QNNQENTIPITPKTFTSQEAEKFKCRAWFPRITEARPEGKLTKKPYQFLNIWV 1652
Query: 327 MRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLY 386
+R+YLEL+ +K P + +E +IDD+V + FL GNDFIP++P L I GA+ LL
Sbjct: 1653 LREYLELD---MKIPNPIQ-TLDVERMIDDFVFICFLTGNDFIPHIPSLEIHEGAIDLLI 1708
Query: 387 KVYQEVLPTLDGYI--------NEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
+VY+ + GYI YL + R EKF +L+ ++ + F + Y
Sbjct: 1709 EVYKTSFNKMGGYIVDTDKVKDKHAAYLKVSRLEKFFHELSLYEEKIFLKCY 1760
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 115/243 (47%), Gaps = 71/243 (29%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQI------------PEFDNLYLDMNGIIHNCSHPND 48
MGVP F+R++ +YP + + P + NLYLDMNGIIH C HP D
Sbjct: 1 MGVPSFYRWLVGKYPAIVSPANDDDDDVGSSSNGAAAPPVYHNLYLDMNGIIHPCFHPQD 60
Query: 49 N----DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
P T +++F +F Y++ L R+++P L ++A+DGVAPRAKMNQQR RRF+S
Sbjct: 61 QVCPPSP-VPTTLEEVFHSMFDYMDRLIRIVRPTSLLYLAVDGVAPRAKMNQQRARRFKS 119
Query: 105 ---AKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
AK+AEV E ++
Sbjct: 120 AMAAKQAEVEENILRD-------------------------------------------- 135
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
RFR A+ +VL ++ E D N IT GT FM +L L+Y+++ ++ +D L
Sbjct: 136 RFR-AEGKKVLPRETSSSSE------VSDPNVITLGTEFMDKLSDALKYYIRARLNSDPL 188
Query: 222 WKD 224
WKD
Sbjct: 189 WKD 191
Score = 82.8 bits (203), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 74/180 (41%), Gaps = 33/180 (18%)
Query: 496 WRTNFFSEFGQHKTDYYHYKLDYAKVT--------NEVLRDQAECYIRAIQWNLHYYYNG 547
W++ FF E +T KL VT N +L + Y+ + W L YY+
Sbjct: 1906 WKSRFFKEKFDAETKDEIAKLQNEMVTISCFLNYANGILYLTVQKYLEGLCWVLCYYFAD 1965
Query: 548 CVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNL 607
SWSWYYP +YAP+ SD++ S LP Y L
Sbjct: 1966 VPSWSWYYPFYYAPFASDVRGLSR-------------------------SFALPGCYSKL 2000
Query: 608 MTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
M + S I +YP E D +GK+ W+ + +PFI++ L+ E L E RN
Sbjct: 2001 MDCDESAIQAFYPSELDIDTDGKRYLWQGIAKLPFIEDKLLLSVTKTAEKDLAVHELRRN 2060
>gi|350646476|emb|CCD58875.1| 5'-3' exoribonuclease, putative [Schistosoma mansoni]
Length = 1638
Score = 149 bits (376), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 111/178 (62%), Gaps = 10/178 (5%)
Query: 273 YGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLE 332
Y D +I GL THE +LRE V +Q + + F + +LS++R+Y++
Sbjct: 58 YSFDPCVISPGLTTHEINICILRENVV--------KAQNCSADNKPFCITYLSVLREYID 109
Query: 333 LEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEV 392
LEF +LK+ L FP+ +E +IDDWV M FL+GNDFIP++P+LHI +L ++ YQ V
Sbjct: 110 LEFTELKK--TLPFPYDLERLIDDWVFMAFLLGNDFIPHIPNLHIHAESLLTVWDTYQVV 167
Query: 393 LPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHK 450
LP LDGY+ E GYLNL RF K+L +L+ F+ + F E+ A +++ GK G + ++ K
Sbjct: 168 LPKLDGYLVELGYLNLPRFHKYLEELSQFERDWFEEREAAFRWMRGKQGARMANELEK 225
Score = 92.0 bits (227), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 143/333 (42%), Gaps = 67/333 (20%)
Query: 504 FGQHKTDYYHYKL---------DYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWY 554
+ H+ DYY KL D + N L + YIR +QW L+YY+ W ++
Sbjct: 369 YKMHRRDYYSSKLGIQLDEMSGDLGE--NSTLMSLIQDYIRMLQWILNYYFLNVADWDFF 426
Query: 555 YPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSP 614
Y +HYAP++ D+ ++ K+E + F + S+ +LP
Sbjct: 427 YAYHYAPFVHDLILYTK---KFENCQNFNGIKLSWTNFQTNSQPVLP------------- 470
Query: 615 ILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLV 674
LIPF+D+ LI AM + LT++E+ RN+H L
Sbjct: 471 -----------------------FLIPFLDQQLLINAMKDGDTKLTEQEKQRNQHKSHLF 507
Query: 675 YTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFP 734
Y + G +P IN + YR + ++L + + V FP
Sbjct: 508 YRACPI--GRVKSP--VELINHD------FYRKSVNCGESELSQFYASIT--RSVVDDFP 555
Query: 735 TLKHVQFTHKIENAKVKVFQQPSRNESIIIVQ----DKVQVPSLKQVADQILGKTIFINY 790
+L + FTHKI+ V VF++PS+ +S+ + + + SL Q+A+ ILG+ I + +
Sbjct: 556 SLSRLPFTHKIQRIPVYVFERPSKLDSMALTMKPHPEFSKYDSLGQLAESILGRPIRVRW 615
Query: 791 PHLIEIR-VQAVATKDSRISFDKNSGPVFERAA 822
P + V+ ++T + D N P+ + ++
Sbjct: 616 PFCATVMPVRLMSTGEIWELVDFNVEPIIKPSS 648
Score = 77.0 bits (188), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 146/355 (41%), Gaps = 54/355 (15%)
Query: 906 TIDEIFYPGCQCFALSNPHYGSGGCVIST-VKEENSFIKLSFKVQQEPDLSDLVHLQDDT 964
++ IF+PG F+L+ YGS G VI+ K+ ++ V DL + ++
Sbjct: 835 SLHTIFHPGKIVFSLAKESYGSVGEVIAVDQKKGKVMVRFYPDVSSSTDLMEFCSQVEEW 894
Query: 965 VY-NYLPSYTVASKLSISPLLLSRFTGSIFI------------------IDSTEEGAKRH 1005
+ N+ + VA +L S + I I+ + G K
Sbjct: 895 EHDNFYTNIMVADQLITFESCSSSGDNNEIIGKHNQYSETIPDNNGENNIEKKKCGQKSF 954
Query: 1006 -NIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDD 1064
NIGLN+K +R +V+G++R W ++++ V L+K + ++FP V+ K S D
Sbjct: 955 ANIGLNLKRNRSGAQVLGWSRFCTVRHTWLFSDRTVDLLKKFSEKFPSVWE--KVLKSSD 1012
Query: 1065 IYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDA----KVVSLIEHAVD-- 1118
R++ + V +I+ ++ A V P +D K+ SL +D
Sbjct: 1013 SCKRNNSCIKLNSKEVDEIMEFIANSECRNAPVLPQKGIYLDKEWLQKLKSLYLKDMDKT 1072
Query: 1119 TCEKVEKQI------------TLFVKPNKLYIPKPTLDKLCP-----------DPDTKFK 1155
CE V+ QI TLFV N P+ L P + F
Sbjct: 1073 VCEPVDHQIWNKKPPVNCSPTTLFVSVNSDTRIYPSSYNLSPFDRCYYSSNCSSVFSSFT 1132
Query: 1156 LFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDA--MYDVVFDKPFPHGVKIRCS 1208
L D+VV I +PLG G +IG+ G S + + +V+F + F + IR S
Sbjct: 1133 LLDKVVYIGIGQNIPLGLHGIVIGVPSGVGSQKSEQLVEVMFCRTFTDAIDIRGS 1187
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K FF+A+DGVAPRAKM QQR RRF+SA E + ++ K+ P FD I+PG
Sbjct: 12 PRKTFFLAVDGVAPRAKMTQQRARRFQSALEGRIAKENLKDNS---PETYSFDPCVISPG 68
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 76 QPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 117
+P+K FF+A+DGVAPRAKM QQR RRF+SA E + ++ K+
Sbjct: 11 KPRKTFFLAVDGVAPRAKMTQQRARRFQSALEGRIAKENLKD 52
>gi|256077064|ref|XP_002574828.1| 5'-3' exoribonuclease [Schistosoma mansoni]
Length = 1637
Score = 149 bits (376), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 111/178 (62%), Gaps = 10/178 (5%)
Query: 273 YGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLE 332
Y D +I GL THE +LRE V +Q + + F + +LS++R+Y++
Sbjct: 58 YSFDPCVISPGLTTHEINICILRENVV--------KAQNCSADNKPFCITYLSVLREYID 109
Query: 333 LEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEV 392
LEF +LK+ L FP+ +E +IDDWV M FL+GNDFIP++P+LHI +L ++ YQ V
Sbjct: 110 LEFTELKK--TLPFPYDLERLIDDWVFMAFLLGNDFIPHIPNLHIHAESLLTVWDTYQVV 167
Query: 393 LPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHK 450
LP LDGY+ E GYLNL RF K+L +L+ F+ + F E+ A +++ GK G + ++ K
Sbjct: 168 LPKLDGYLVELGYLNLPRFHKYLEELSQFERDWFEEREAAFRWMRGKQGARMANELEK 225
Score = 90.1 bits (222), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 138/341 (40%), Gaps = 84/341 (24%)
Query: 504 FGQHKTDYYHYKL---------DYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWY 554
+ H+ DYY KL D + N L + YIR +QW L+YY+ W ++
Sbjct: 369 YKMHRRDYYSSKLGIQLDEMSGDLGE--NSTLMSLIQDYIRMLQWILNYYFLNVADWDFF 426
Query: 555 YPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSP 614
Y +HYAP++ D+
Sbjct: 427 YAYHYAPFVHDL------------------------------------------------ 438
Query: 615 ILEYYPEEFATDLNGKKQDWE--------AVVLIPFIDEVKLIKAMDAVEHLLTDEERSR 666
IL E + NG K W LIPF+D+ LI AM + LT++E+ R
Sbjct: 439 ILYTKKFENCQNFNGIKLSWTNFQTNSQPVFTLIPFLDQQLLINAMKDGDTKLTEQEKQR 498
Query: 667 NRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNL 726
N+H L Y + G +P IN + YR + ++L +
Sbjct: 499 NQHKSHLFYRACPI--GRVKSP--VELINHD------FYRKSVNCGESELSQFYASIT-- 546
Query: 727 KLYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQ----DKVQVPSLKQVADQIL 782
+ V FP+L + FTHKI+ V VF++PS+ +S+ + + + SL Q+A+ IL
Sbjct: 547 RSVVDDFPSLSRLPFTHKIQRIPVYVFERPSKLDSMALTMKPHPEFSKYDSLGQLAESIL 606
Query: 783 GKTIFINYPHLIEIR-VQAVATKDSRISFDKNSGPVFERAA 822
G+ I + +P + V+ ++T + D N P+ + ++
Sbjct: 607 GRPIRVRWPFCATVMPVRLMSTGEIWELVDFNVEPIIKPSS 647
Score = 77.0 bits (188), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 146/355 (41%), Gaps = 54/355 (15%)
Query: 906 TIDEIFYPGCQCFALSNPHYGSGGCVIST-VKEENSFIKLSFKVQQEPDLSDLVHLQDDT 964
++ IF+PG F+L+ YGS G VI+ K+ ++ V DL + ++
Sbjct: 834 SLHTIFHPGKIVFSLAKESYGSVGEVIAVDQKKGKVMVRFYPDVSSSTDLMEFCSQVEEW 893
Query: 965 VY-NYLPSYTVASKLSISPLLLSRFTGSIFI------------------IDSTEEGAKRH 1005
+ N+ + VA +L S + I I+ + G K
Sbjct: 894 EHDNFYTNIMVADQLITFESCSSSGDNNEIIGKHNQYSETIPDNNGENNIEKKKCGQKSF 953
Query: 1006 -NIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDD 1064
NIGLN+K +R +V+G++R W ++++ V L+K + ++FP V+ K S D
Sbjct: 954 ANIGLNLKRNRSGAQVLGWSRFCTVRHTWLFSDRTVDLLKKFSEKFPSVWE--KVLKSSD 1011
Query: 1065 IYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDA----KVVSLIEHAVD-- 1118
R++ + V +I+ ++ A V P +D K+ SL +D
Sbjct: 1012 SCKRNNSCIKLNSKEVDEIMEFIANSECRNAPVLPQKGIYLDKEWLQKLKSLYLKDMDKT 1071
Query: 1119 TCEKVEKQI------------TLFVKPNKLYIPKPTLDKLCP-----------DPDTKFK 1155
CE V+ QI TLFV N P+ L P + F
Sbjct: 1072 VCEPVDHQIWNKKPPVNCSPTTLFVSVNSDTRIYPSSYNLSPFDRCYYSSNCSSVFSSFT 1131
Query: 1156 LFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDA--MYDVVFDKPFPHGVKIRCS 1208
L D+VV I +PLG G +IG+ G S + + +V+F + F + IR S
Sbjct: 1132 LLDKVVYIGIGQNIPLGLHGIVIGVPSGVGSQKSEQLVEVMFCRTFTDAIDIRGS 1186
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+K FF+A+DGVAPRAKM QQR RRF+SA E + ++ K+ P FD I+PG
Sbjct: 12 PRKTFFLAVDGVAPRAKMTQQRARRFQSALEGRIAKENLKDNS---PETYSFDPCVISPG 68
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 76 QPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKE 117
+P+K FF+A+DGVAPRAKM QQR RRF+SA E + ++ K+
Sbjct: 11 KPRKTFFLAVDGVAPRAKMTQQRARRFQSALEGRIAKENLKD 52
>gi|281206450|gb|EFA80636.1| 5'-3' exoribonuclease [Polysphondylium pallidum PN500]
Length = 538
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 107/160 (66%), Gaps = 18/160 (11%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK----GERLPTEKRFDSNC 193
PKKL +MAIDGVAPR+K+NQQR RRF S LE KAK+K G+ +P E F
Sbjct: 337 PKKLLYMAIDGVAPRSKLNQQRQRRFLSV----FLEDKAKQKMISEGKEIP-EVIFSRTA 391
Query: 194 ITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMD 253
ITPGT FM L L++F+K KI D W++V +I SG E PGEGEHKI+D
Sbjct: 392 ITPGTEFMSNLSDCLQFFIKKKINED---------MSWREVEIIFSGPENPGEGEHKIID 442
Query: 254 YIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSL 293
YIR K+ PD++PN HCLYGLDADLI+L L THEP+F+L
Sbjct: 443 YIRKNKASPDWDPNQSHCLYGLDADLILLALVTHEPHFNL 482
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 89/127 (70%), Gaps = 9/127 (7%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP+FFR++SERYP + + + + PE+DNLYLDMNGIIH CS N +E+++
Sbjct: 262 MGVPRFFRWVSERYPQIIQNLVDSTAPEYDNLYLDMNGIIHACSQEISNSL-LTFSEEEL 320
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK-- 118
+ + +YI+ LF +I+PKKL +MAIDGVAPR+K+NQQR RRF S LE KAK+K
Sbjct: 321 IRKVCNYIDKLFHIIRPKKLLYMAIDGVAPRSKLNQQRQRRFLSV----FLEDKAKQKMI 376
Query: 119 --GERLP 123
G+ +P
Sbjct: 377 SEGKEIP 383
>gi|323455278|gb|EGB11147.1| hypothetical protein AURANDRAFT_22633 [Aureococcus anophagefferens]
Length = 356
Score = 147 bits (370), Expect = 7e-32, Method: Composition-based stats.
Identities = 114/277 (41%), Positives = 148/277 (53%), Gaps = 25/277 (9%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK----EKGERLPTEKRFDSNC 193
P KL ++A+DGVAPRAKMNQQR RRF SA+EA+ + +G R + R+D N
Sbjct: 72 PTKLVYLALDGVAPRAKMNQQRTRRFCSAREADEAAAATRELLARRGHRPAAKARWDHNA 131
Query: 194 ITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMD 253
ITPGT FM +L R W ++L + + VI+S TPGEGEHKIMD
Sbjct: 132 ITPGTEFMAKLAAFCRR-----------WAESL-VARCPQLSVIVSDAATPGEGEHKIMD 179
Query: 254 YIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVT 313
+IR ++ PD RH + G DADL+ L L H P +LRE V+ K GG
Sbjct: 180 WIRRSQADPDRRGE-RHAVCGQDADLMFLSLALHAPRVYVLRERVETRRKPRGGGKGGPP 238
Query: 314 PEETKFF----LLHLS---LMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGN 366
PE K F L +LS L R + G L FP E +DD+VL+ F +GN
Sbjct: 239 PEPRKAFGPPRLQYLSCQRLRRCLIGDASLNAAADGALPFPRDDERFLDDFVLLCFFVGN 298
Query: 367 DFIPNLPDLHIINGALPLLYKVYQEVLPT-LDGYINE 402
DF+P LP L I +G L LL +Y+ LP L GY+ +
Sbjct: 299 DFLPQLPSLSIPDGGLDLLLLLYRRALPRHLGGYLTD 335
Score = 98.6 bits (244), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/104 (45%), Positives = 67/104 (64%), Gaps = 5/104 (4%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP FFR+++ RYP L E + + +NLY+D NG++H C HP TE+++
Sbjct: 1 MGVPAFFRWLAARYPPL-----EARWVQVENLYVDCNGVVHPCCHPEGPGAVQPATEEEM 55
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
++ Y++ L +P KL ++A+DGVAPRAKMNQQR RRF S
Sbjct: 56 LDNVGAYLDRLVAAARPTKLVYLALDGVAPRAKMNQQRTRRFCS 99
>gi|157867636|ref|XP_001682372.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
gi|68125825|emb|CAJ03874.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
Length = 1164
Score = 147 bits (370), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 158/348 (45%), Gaps = 62/348 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEKQ 59
MGVPKF +++ +YP +V + + LY+D+NG+IH C H +++DP + T+++
Sbjct: 1 MGVPKFAAWLARKYP---SMVMDSCPGDVHGLYIDLNGLIHPCCH-DEHDPSVALRTQEE 56
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ I IE L ++P+++ ++AIDGV PRAKMNQQR RR+ S+ K G
Sbjct: 57 KLRSICLAIETLVVTVRPQRVIYIAIDGVVPRAKMNQQRARRYMSSAAPLTDTDKPIHGG 116
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPR-AKMNQQ-RGRRFRSAKEAEVLEQKAK 177
+ T+ K+ DGV A ++Q G L + A
Sbjct: 117 SHKMSA------TIVAAIEKEFTQAECDGVERELADVSQALMGDVLYGGCATMALAEDAT 170
Query: 178 EKGE-------------------------------RLP----TEKRFDSNCITPGTPFMC 202
EK E R P + +FDSNCI+PGT FM
Sbjct: 171 EKAEAHTLAAAPWTIPPTLASEGKKDACCAAAQVGRQPAAAASPAKFDSNCISPGTAFMD 230
Query: 203 RLHQQLRYFVKLKIT---TDKLWKD-----------TLSLWVWKDVCVILSGHETPGEGE 248
+ +R +++ K+ D K T + W + VI S T GEGE
Sbjct: 231 AVATAVRDYIRRKLAPKENDAGGKAEAEAGASPAAITATCAHWAGLTVIFSDSNTAGEGE 290
Query: 249 HKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLRE 296
HKI D++R + P +N + H + GLDADLI L L H P +LR+
Sbjct: 291 HKISDFLRTQSAFPGFNGSGCHVIAGLDADLIFLSLSLHIPRVVILRD 338
Score = 100 bits (249), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 141/338 (41%), Gaps = 81/338 (23%)
Query: 349 SIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY-QEVLPTLDGYINEGGYLN 407
S IIDD++ +G L+GNDF+P+LP ++ A+ L VY + VLP GY+ GG +
Sbjct: 564 SNSKIIDDFIALGVLLGNDFLPHLPSVYCGESAMDTLMDVYVRAVLPY--GYLT-GGEYD 620
Query: 408 LKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKAT 467
++ + A E R + IQ G M H
Sbjct: 621 IQLLQLERLLRAYAAVEAARFRQFAIQ--SGAM------TLH------------------ 654
Query: 468 DDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLR 527
D T E+ + A+ WR D Y V LR
Sbjct: 655 ----DAATPELCSAADRRC---------WR------------DVY--------VRTTSLR 681
Query: 528 D----QAEC--YIRAIQWNLHYYYNGC--VSWSWYYPHHYAPYISDIKDFSHL---NLKY 576
D QA C Y+ +++ YY + VSW+WYYP H+AP DI DF ++
Sbjct: 682 DEAGAQAACRSYVEGMRFVWRYYSSISLQVSWAWYYPFHHAPLALDIADFLRAQGPQVQT 741
Query: 577 EMGEPFL------PFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ P L PF QLL +LP S++L+P+ + M + + + +P + D G
Sbjct: 742 TLAAPKLEWQPPSPFCQLLCILPPPSRQLVPDALRATMASPPAELADTFPHRWVVDRTGA 801
Query: 631 -KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
+D VL+PF D ++L + + A T+ E+ RN
Sbjct: 802 YGKDHLVTVLLPFADVLRLQELVAAASGTYTEAEQQRN 839
>gi|71033443|ref|XP_766363.1| 5'-3' exonuclease [Theileria parva strain Muguga]
gi|68353320|gb|EAN34080.1| 5'-3' exonuclease, putative [Theileria parva]
Length = 534
Score = 146 bits (369), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 175/402 (43%), Gaps = 89/402 (22%)
Query: 30 DNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVA 89
D Y+DMN +IH+ +H N P + ++Q + I + F+++ PKK+ ++ +DGV
Sbjct: 66 DYFYVDMNAVIHSATHGNLF-PVLMMEDQQRMRRIVTAMLNTFKLVNPKKMMYIGVDGVC 124
Query: 90 PRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGV 149
P AK+NQQR RRFR K + KGE + + + KL A D V
Sbjct: 125 PSAKINQQRTRRFRLYKSSS--SDNEYYKGENGEMKYKVN----------KLKVGAYDNV 172
Query: 150 APRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLR 209
F+ + I+PGT FM + ++R
Sbjct: 173 T--------------------------------------FNPSYISPGTQFMSMMDSEIR 194
Query: 210 YFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMR 269
++ L+ W D ++ SG + PGEGEHKI D IR M D
Sbjct: 195 NWIALQNYEG----------TWNDCYIVYSGTDVPGEGEHKIYDTIRKMVELDDNVKKST 244
Query: 270 HCLYGLDADLIMLGLCTHEPYFSLLREEVKF--NTKSNKGGSQIVTPEETKFFLLHLSLM 327
H +YGLDADL+ML L T P +LREE F + S + + + E F ++ S
Sbjct: 245 HLVYGLDADLVMLSLITKLPKMYILREEHNFTPHILSKEKPNPYFSKETDHVFKVYESF- 303
Query: 328 RDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYK 387
++ FS L+ F+ GNDF+P+LP + + N + L
Sbjct: 304 ----------------WNYDFS---------LLSFMAGNDFLPHLPTVELCNSSFNDLIN 338
Query: 388 VYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
+Y ++LP L G++ + +N R + + +L +FE F+ K
Sbjct: 339 MYYKMLPKLRGFLTQTYKINTSRLQLLMKELCKNEFEYFKMK 380
Score = 41.6 bits (96), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 602 EPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
+ +Q L+ S + +Y+PE+F +GK +WE VV +PF+D L + +V
Sbjct: 462 QTWQRFQELQLSSLCQYFPEDFEICEDGKDNEWEHVVKLPFLDTKHLCEVARSV 515
>gi|253744666|gb|EET00835.1| 5'-3' exoribonuclease 2 [Giardia intestinalis ATCC 50581]
Length = 1956
Score = 145 bits (367), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 196/479 (40%), Gaps = 122/479 (25%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGV + FR+I ERYP + DNLY+D N +IH + P F+ TE +
Sbjct: 1 MGVARLFRWIYERYPFAITTPGASFVSRIDNLYIDFNALIHESIRKDSYIP-FKFTEAML 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F +I YI++L +QP+K F+A DGVAP AK QQR RR+ + + E G
Sbjct: 60 FGEIADYIQVLVSTVQPRKRIFIATDGVAPDAKTKQQRVRRYMGSYQKE---------GS 110
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
L EK I G A EAE+L + G
Sbjct: 111 TLYKEK-------------------IAGTA-------------NVLSEAELLASRHIANG 138
Query: 181 ----ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCV 236
LP + I+PGT FM RLH L FV + ++ W V
Sbjct: 139 NSDDRSLPPQNV--KTAISPGTLFMDRLHSFLIAFVAKNVDSEAPG--------WVHPSV 188
Query: 237 ILSGHETPGEGEHKIMDYIRYM---------------KSKPDYNP-NMRHCLYGLDADLI 280
+SG + GEGEHKIM I+ + KS ++ P + HC+ GLDAD+I
Sbjct: 189 TISGWDMCGEGEHKIMTEIKRIKQLEEQAAIGVDYSEKSFSEFFPYHESHCICGLDADII 248
Query: 281 MLGLCTHEPYFSLLR-EEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYL--ELEFGK 337
+LGL H LLR + F T + P + + ++ LS R+ + EL +
Sbjct: 249 LLGLGVHVQNVYLLRLWQPPFVTDTLDILDSKKHPTDNELIVVDLSCFRECIVGELISNR 308
Query: 338 LKEPGVL------SFPFSI---------------------------------------EN 352
P +L SFP S
Sbjct: 309 FHNPKLLHALCCQSFPDSYMQRLRNCYPRLSKELHDDGVLSRLSLNVLQEAFVWSPLGSA 368
Query: 353 IIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRF 411
+I D++++ +GNDF+P +P + I NG+L +Y+E+L D Y+ + N+K+
Sbjct: 369 LIVDFIILTLFVGNDFLPEVPGMLIKNGSLDNCIAIYRELLA--DTYLLDDLCKNIKKI 425
>gi|401418979|ref|XP_003873980.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490213|emb|CBZ25474.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1161
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 158/346 (45%), Gaps = 60/346 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEKQ 59
MGVPKF +++ +YP +V + + LY+D+NG+IH C H +++DP + T+++
Sbjct: 1 MGVPKFAAWLTRKYP---SMVMDSCPGDVHGLYIDLNGLIHPCCH-DEHDPSVALRTQEE 56
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ I IE L ++P+++ ++AIDGV PRAK+NQQR RR+ S+ K G
Sbjct: 57 KLRSICLAIETLVVTVRPQRVIYIAIDGVVPRAKLNQQRARRYMSSAVPLTDTDKPTRGG 116
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPR-AKMNQQ-RGRRFRSAKEAEVLEQKAK 177
+ T+ K+ DGV A ++Q G A L +
Sbjct: 117 SHKMSA------TIVAAIEKEFTQAECDGVERELADVSQALMGDVLYGGCAAMALAEDTT 170
Query: 178 EKGE----------RLPT-----EK---------------------RFDSNCITPGTPFM 201
EK E +PT EK +FDSNCI+PGT FM
Sbjct: 171 EKAEVHTLAAAPWVTVPTLASQGEKGACCAAAAQIGRQPAAAASPAKFDSNCISPGTAFM 230
Query: 202 CRLHQQLRYFVKLKIT-----------TDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
+ +R +++ K+ + + W + V+ S T GEGEHK
Sbjct: 231 DAVATAVRDYIRRKLAPKESDGGGEAVAEAGASPAATCAHWAGLTVVFSDSNTAGEGEHK 290
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLRE 296
I D++R + P +N + H + GLDADLI L L H P +LR+
Sbjct: 291 IFDFLRTQSAFPGFNGSGCHVIAGLDADLIFLSLSLHIPRVVILRD 336
Score = 107 bits (268), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 146/337 (43%), Gaps = 83/337 (24%)
Query: 351 ENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY-QEVLPTLDGYINEGGY-LNL 408
IIDD++++G L+GNDF+P+LP ++ A+ L VY + VLP GY+ G Y + L
Sbjct: 563 SKIIDDFIVLGVLLGNDFLPHLPSVYCGESAMDTLMDVYVRAVLPY--GYLTGGEYEIQL 620
Query: 409 KRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATD 468
+ E+ A+ + +FR Q++ +S M P
Sbjct: 621 LQLERLFRAYAAVEAARFR------QFVI--------------QSGAMTP---------- 650
Query: 469 DDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRD 528
+D T E+ + A+ WR D Y V LRD
Sbjct: 651 --HDAATPELCSAAD---------RRCWR------------DVY--------VRTTSLRD 679
Query: 529 ----QAEC--YIRAIQWNLHYYYNGC--VSWSWYYPHHYAPYISDIKDFSHL---NLKYE 577
QA C Y+ +++ YY + VSW+WYYP H+AP DI DF ++
Sbjct: 680 EAGAQAACRSYVEGMRFVWRYYSSISLQVSWAWYYPFHHAPLALDIADFLRAQGPQVQTT 739
Query: 578 MGEPFL------PFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK- 630
+ P L PF QLL +LP+ S +L+P+ + M + + + +P + D G
Sbjct: 740 LAAPKLEWQPPSPFCQLLCILPSPSCQLVPDALRATMASPPAELADTFPRRWVVDRTGAY 799
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
+D A L+PF + +L + + A T+ E+ RN
Sbjct: 800 GKDHLATALLPFANVPRLQELVAAASGTYTEAEQQRN 836
>gi|145507550|ref|XP_001439730.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406925|emb|CAK72333.1| unnamed protein product [Paramecium tetraurelia]
Length = 394
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 90/144 (62%), Gaps = 1/144 (0%)
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVL 592
Y+ A+ W L YYY GCV W W+YP+HYAP+ D+ + ++ + PF P+QQLLAVL
Sbjct: 123 YLEALAWTLKYYYQGCVDWGWFYPYHYAPFAQDLTNLDQCMFEFSLNTPFKPYQQLLAVL 182
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAM 652
P S + LP PYQ LM +S I ++YP +F DL GKK W V++PF+D +LI A
Sbjct: 183 PPQSAQFLPRPYQQLMLESSSSIADFYPTDFVVDLKGKKFAWLGEVVLPFVDADRLISAS 242
Query: 653 DAVEHLLTDEERSRNRHGPMLVYT 676
+ + L+ E+ R+R G L+++
Sbjct: 243 NIGVN-LSKLEQERDRLGQTLIFS 265
>gi|147862841|emb|CAN82967.1| hypothetical protein VITISV_021856 [Vitis vinifera]
Length = 500
Score = 144 bits (363), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 553 WYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLEN 612
W+YP+HYAP+ SD+KD LN+ +E+G PF PF QLL V PAAS LPE Y+ LMT N
Sbjct: 27 WFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPEEYRKLMTDPN 86
Query: 613 SPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
SPI+++YP +F D+NGK+ W+ + +PFIDE +L+ + +EH LT+EE RN
Sbjct: 87 SPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRN 141
>gi|307109532|gb|EFN57770.1| hypothetical protein CHLNCDRAFT_143098, partial [Chlorella
variabilis]
Length = 234
Score = 144 bits (362), Expect = 7e-31, Method: Composition-based stats.
Identities = 104/326 (31%), Positives = 132/326 (40%), Gaps = 141/326 (43%)
Query: 3 VPKFFRYISERYPCLSEVVREYQIPEFDNLYLDM-------------------------- 36
+PKF+R++SERYP +++ +P DNLYLDM
Sbjct: 4 IPKFYRWLSERYPLVNQPGGATVVPIIDNLYLDMVSEAAGGSMGAAKGSSSSSSARRAHA 63
Query: 37 -----------NGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAI 85
NGIIHNC+H N+P R+TE+++ IF Y++ KLF +
Sbjct: 64 ACRCLRQGGAPNGIIHNCTH--GNNPDVRLTEEEMILKIFTYLD---------KLFHI-- 110
Query: 86 DGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMA 145
V P+A KL FMA
Sbjct: 111 --VKPQAGGG--------------------------------------------KLLFMA 124
Query: 146 IDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPT-EKRFDSNCITPGTP----- 199
IDG APRAKMNQQR RRF+SA+EA+ + A +GE +P + RFDSNCITPGT
Sbjct: 125 IDGSAPRAKMNQQRARRFKSAREAQEAMEAAVRRGEPVPEPDARFDSNCITPGTREGTLP 184
Query: 200 ---FMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIR 256
+C L L+ W
Sbjct: 185 RCGTLCMLGDAALRCAALRCAALPCW---------------------------------- 210
Query: 257 YMKSKPDYNPNMRHCLYGLDADLIML 282
K +PDY PNMRHCLYGLDADLIML
Sbjct: 211 --KRRPDYAPNMRHCLYGLDADLIML 234
>gi|146083592|ref|XP_001464783.1| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
gi|134068877|emb|CAM59811.1| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
Length = 1158
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 157/351 (44%), Gaps = 66/351 (18%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEKQ 59
MGVPKF +++ +YP +V + + LY+D+NG+IH C H +++DP + T+++
Sbjct: 1 MGVPKFAAWLTRKYP---SMVMDSCPGDVHGLYIDLNGLIHPCCH-DEHDPSVALRTQEE 56
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ I IE L ++P+ + ++A+DGV PRAKMNQQR RR+ S+ K G
Sbjct: 57 KLRSICLAIETLVVTVRPQHVIYIAVDGVVPRAKMNQQRARRYMSSAAPLTDTDKPIHGG 116
Query: 120 ERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPR-AKMNQQ-RGRRFRSAKEAEVLEQKAK 177
+ T+ K+ DGV A ++Q G L + A
Sbjct: 117 SHELSA------TIVAAIEKEFTQAECDGVERELADVSQALMGDVLYGGCATMALAEDAT 170
Query: 178 EKGE-------------------------------RLP----TEKRFDSNCITPGTPFMC 202
EK E R P + +FDSNCI+PGT FM
Sbjct: 171 EKAEAHTLAAAPWTTALTLASEGAEGACCAAAQVGRQPAAAASPAKFDSNCISPGTAFMD 230
Query: 203 RLHQQLRYFVKLKITTDKLWKD----------------TLSLWVWKDVCVILSGHETPGE 246
+ +R +++ K+ K D + W + VI S T GE
Sbjct: 231 AVAAAVRDYIRHKLAPKK--NDDGGKAEAEAGASPAAINATCAHWAGLTVIFSDSNTAGE 288
Query: 247 GEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE 297
GEHKI D++R + P +N + H + GLDADLI L L H P +LR++
Sbjct: 289 GEHKIFDFLRTQSAFPGFNGSGCHVIAGLDADLIFLSLSLHIPRVVILRDQ 339
Score = 100 bits (248), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 146/338 (43%), Gaps = 81/338 (23%)
Query: 349 SIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY-QEVLPTLDGYINEGGYLN 407
S IIDD++++G L+GNDF+P+LP ++ A+ L VY + VLP GY+ G Y
Sbjct: 558 SNSKIIDDFIVLGVLLGNDFLPHLPSVYCGESAMDTLMDVYVRAVLPY--GYLTGGEY-- 613
Query: 408 LKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKAT 467
+ E+ YA + E ++F+ +S M P
Sbjct: 614 ---------DIRLLQLERLLRAYAAV---EAACFRQFA-----IQSGAMKP--------- 647
Query: 468 DDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLR 527
+D T E+ + +++ WR D Y + LR
Sbjct: 648 ---HDAATPELCS---------AEDRRCWR------------DVY--------LRTTSLR 675
Query: 528 D----QAEC--YIRAIQWNLHYYYNGC--VSWSWYYPHHYAPYISDIKDFSHL---NLKY 576
D QA C Y+ +++ YY + VSW+WYYP H+AP DI DF ++
Sbjct: 676 DEAGSQAACRSYVEGMRFVWRYYSSISLQVSWAWYYPFHHAPLALDIADFLRAQGPQVQT 735
Query: 577 EMGEPFL------PFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
+ P L PF QLL +LP S++L+P+ + M + + + +P + D G
Sbjct: 736 TLAAPKLEWQPPSPFCQLLCILPPPSRQLVPDALRATMASPPAELADTFPHRWVVDRTGA 795
Query: 631 -KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
+D A VL+PF + +L + + A T+ E+ RN
Sbjct: 796 YGKDHLATVLLPFANVSRLQELVAAASGTYTEAEQQRN 833
>gi|308160629|gb|EFO63105.1| 5'-3' exoribonuclease 2 [Giardia lamblia P15]
Length = 1954
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 183/461 (39%), Gaps = 120/461 (26%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGV + FR+I ERYP + DNLY+D N +IH + P F TE I
Sbjct: 1 MGVGRLFRWIYERYPLAVTTPGASFVSRIDNLYIDFNALIHESIRKDSYIP-FTFTEAMI 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F +I YI++L +QP+K F+A DGVAP AK QQR RR+ A E+ +
Sbjct: 60 FGEIADYIQVLVSTVQPRKRIFIATDGVAPSAKAKQQRTRRYMGAYESVGV--------- 110
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
KL+ I G A E E L K G
Sbjct: 111 -------------------KLYRNNIAGTA-------------TILSEVEFLTSKHIANG 138
Query: 181 ----ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCV 236
+ LP + I+PGT FM RLH L FV + ++ W V
Sbjct: 139 NNDDQTLPPQNL--KAAISPGTLFMDRLHSFLIAFVAKNVDSEAPG--------WVQPAV 188
Query: 237 ILSGHETPGEGEHKIMDYIRYMKSKPD----------------YNPNMRHCLYGLDADLI 280
+SG + GEGEHKIM IR +K D + + HC+ GLDAD++
Sbjct: 189 TISGWDMCGEGEHKIMAEIRRLKRLEDLATIGVDYSEKSFSEFFPHHESHCICGLDADIV 248
Query: 281 MLGLCTHEPYFSLLR-EEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYL--ELEFGK 337
+LGL H +LR + F T + P + ++ LS R+ + EL +
Sbjct: 249 LLGLGLHVHNVYILRLWQPPFVTDTVDILESKRHPTDKGLIVVDLSCFRECIVAELISNR 308
Query: 338 LKEPGVL------SFPFSI---------------------------------------EN 352
+P +L SFP S
Sbjct: 309 FHDPKLLHALCHQSFPHSYMQRLRNCYPRLSREMNDSGMLSRMSLSVLQEAFVWSPLGSA 368
Query: 353 IIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVL 393
+I D++++ +GNDF+P +P + I N +L +Y+E+L
Sbjct: 369 LIVDFIILTLFVGNDFLPEVPGMLIKNNSLDNCIAIYRELL 409
>gi|290992975|ref|XP_002679109.1| 5'-3' exoribonuclease [Naegleria gruberi]
gi|284092724|gb|EFC46365.1| 5'-3' exoribonuclease [Naegleria gruberi]
Length = 1047
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 177/379 (46%), Gaps = 77/379 (20%)
Query: 30 DNLYLDMNGIIHNCSHP-------NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFF 82
DN Y+D+NG+IH C HP N++D RIT ++ Q L R +QP LF+
Sbjct: 48 DNFYIDLNGLIHPCCHPQTGKKPENEDDMMKRIT-AELLQ--------LARTVQPNNLFY 98
Query: 83 MAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTE--KRFDFITLKFCFPKK 140
+A+DGVAP AK QQR RRF + E EQK K G R+ +E K D +T K+
Sbjct: 99 IAVDGVAPAAKQEQQRHRRFVAISEN---EQKLKFIG-RIQSEITKEKDELT------KE 148
Query: 141 LFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPF 200
+ +D + QQR + SA + +AK + +D N I+PGTPF
Sbjct: 149 IKESEVDKI-------QQREKLLDSA----IARMEAK--------KNHWDHNVISPGTPF 189
Query: 201 MCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKS 260
M + + KL I T+ + + VI+S PGEGEHKI+ Y++ K+
Sbjct: 190 MMKCMSTVHQAAKL-IATE-----------FPHIKVIVSDSSVPGEGEHKILSYMKREKA 237
Query: 261 KPDYN-PNMRHCLYGLDADLIMLGLCTHEP-YFSLLREEVKFNTKSNKGGSQIVTPEETK 318
M H ++GLDADLIML P FS E N + NK ++ E
Sbjct: 238 INSKEFSEMLHVVHGLDADLIMLTSLIGLPKIFSYRDSE---NVRMNKRDKELFNISE-- 292
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLS----FPFSIENIIDDWVLMGFLIGNDFIPNLPD 374
L R + + + + E S +S N + D VL+ +GNDF+PN+P
Sbjct: 293 -------LGRHFARVIYSSIAELDTSSKSQNIDWSNANFVSDVVLLLMFVGNDFLPNVPS 345
Query: 375 LHIINGALPLLYKVYQEVL 393
L + N A ++ Y + L
Sbjct: 346 LVMHNHAASIIMYSYAKYL 364
Score = 100 bits (250), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 108/191 (56%), Gaps = 20/191 (10%)
Query: 510 DYYHYKL-DYAKVTNEVLRDQAECYIRAIQWNLHYY-YNGCVSWSWYYPHHYAPYISDIK 567
+YYH K D + + + L + Y+R I W +YY YN SW W YP HYAP + DI
Sbjct: 530 EYYHKKFGDSSLLFRKTLVKE---YLRGIVWAFNYYSYNDPPSWYWRYPEHYAPVMCDIL 586
Query: 568 D-FSHLNLKY-------EMGEPFLPFQQLLAVLPAASKE-LLPEPYQNLMTLENSPILE- 617
D + +N +Y E GEP +QQL+++LP S E LP+ Y +++ N+P L+
Sbjct: 587 DCYDEINDEYIKDITTFEKGEPLTAYQQLISILPKESMEACLPKTYTDIL---NNPKLDK 643
Query: 618 YYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAM-DAVEHLLTDEERSRNRHGPMLVYT 676
++P+EF D N ++AV L+P ID + L+K + ++ LL++EE +N+ G ++YT
Sbjct: 644 FFPKEFEKDGNFSGIVYKAVSLLPSID-LDLVKNITKEIDPLLSEEESRKNKFGIDVIYT 702
Query: 677 YSNVNLGTALA 687
+ + L+
Sbjct: 703 AVDSEVNKKLS 713
>gi|452819063|gb|EME26163.1| 5'-3' exoribonuclease, partial [Galdieria sulphuraria]
Length = 537
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 107/182 (58%), Gaps = 6/182 (3%)
Query: 508 KTDYYHYKLDYAKVTNEVLRDQAEC---YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYIS 564
K YY K ++ + R + E Y + W + YYY GCVSW+WY+P+HYAP+ S
Sbjct: 125 KERYYEKKFHWSPQSETSQRKREELAYKYFEGLLWVMRYYYRGCVSWTWYFPYHYAPFAS 184
Query: 565 DIKD--FSHLNLKYEMGEPFLPFQQLLAVLP-AASKELLPEPYQNLMTLENSPILEYYPE 621
D+ F +++YE G+PF P +QL+AVLP +++KE+LP+ LM +S + +YP+
Sbjct: 185 DLAACPFEADSVQYERGKPFRPLEQLMAVLPPSSAKEVLPKSLTQLMMDPHSELKPFYPD 244
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVN 681
+F DL GK+ W+ V L+PF+D L A+ E T EER RN G ++ T+ +
Sbjct: 245 DFVIDLEGKRFVWQGVALLPFVDAFLLENAVRNAEESFTLEERERNSIGETILATHKSTL 304
Query: 682 LG 683
LG
Sbjct: 305 LG 306
>gi|355729467|gb|AES09877.1| 5'-3' exoribonuclease 1 [Mustela putorius furo]
Length = 215
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 109/170 (64%), Gaps = 5/170 (2%)
Query: 1064 DIYLRDDVFPHQ---GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTC 1120
D++ DD++P + G ++V +I++WLK P + C ++DA +V IE V+ C
Sbjct: 1 DVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVEKC 60
Query: 1121 E--KVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTII 1178
+ K K++ + VKP+ LY P + PD D +F+LFDRVVN+R+ ++VP+G RGTII
Sbjct: 61 KQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVREYFSVPVGLRGTII 120
Query: 1179 GIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
GI D +++V+FD+ FP G+ IRCS RGYR+P A++NL++G R
Sbjct: 121 GIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLTHGSR 170
>gi|70946141|ref|XP_742816.1| exoribonuclease [Plasmodium chabaudi chabaudi]
gi|56522004|emb|CAH76803.1| exoribonuclease, putative [Plasmodium chabaudi chabaudi]
Length = 742
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 102/167 (61%), Gaps = 5/167 (2%)
Query: 514 YKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISD--IKDFSH 571
+ LD +E +++ YI + W L YY+ C W WYYP++YAP SD IKD S
Sbjct: 165 FHLDETDNVDEFVKEVVYKYIEGLAWVLCYYFQACPMWHWYYPYYYAPLSSDLLIKDIS- 223
Query: 572 LNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKK 631
+ +E EP LPF+QLL VLP+ S LP+ Y+ LM SPI+++YP+ F + NGKK
Sbjct: 224 --ISFEEDEPLLPFEQLLCVLPSNSSHCLPKMYRELMLKNESPIVDFYPKTFKEEENGKK 281
Query: 632 QDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS 678
++ +VL+PF+++ ++I+ ++ LTDEE+ RNR G +Y S
Sbjct: 282 FKYQWIVLLPFVEKERIIRFARDLDDTLTDEEKKRNRRGLNKIYMSS 328
>gi|159474632|ref|XP_001695429.1| single-stranded RNA 5'->3' exonuclease [Chlamydomonas reinhardtii]
gi|158275912|gb|EDP01687.1| single-stranded RNA 5'->3' exonuclease [Chlamydomonas reinhardtii]
Length = 171
Score = 138 bits (348), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 93/126 (73%), Gaps = 2/126 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIP-EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MG+PKF+R++SERYP L++ + + P E DNLYLDMNGIIHNC+H N D +TE+
Sbjct: 1 MGIPKFYRWLSERYPLLNQKLTLTEGPPEMDNLYLDMNGIIHNCTHANRKDIG-GVTEED 59
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
+ +F Y++ L ++++P+KL FMAIDGVAPRAKMNQQR RRF+SA E E++ + KG
Sbjct: 60 MMLKVFDYLDKLVQIVRPQKLLFMAIDGVAPRAKMNQQRSRRFKSAMERLKNEEEQRRKG 119
Query: 120 ERLPTE 125
E +P +
Sbjct: 120 EVVPDD 125
Score = 111 bits (277), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 72/100 (72%), Gaps = 3/100 (3%)
Query: 126 KRFDFI--TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERL 183
K FD++ ++ P+KL FMAIDGVAPRAKMNQQR RRF+SA E E++ + KGE +
Sbjct: 63 KVFDYLDKLVQIVRPQKLLFMAIDGVAPRAKMNQQRSRRFKSAMERLKNEEEQRRKGEVV 122
Query: 184 PTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWK 223
P + FDSNCITPGT FM RL + LR+F++ K+ D LW+
Sbjct: 123 PDDA-FDSNCITPGTEFMARLGKHLRFFIRRKMAEDPLWQ 161
>gi|449519150|ref|XP_004166598.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 590
Score = 137 bits (346), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 80/114 (70%)
Query: 554 YYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENS 613
+YP+HYAP+ SD+K LN+ + +G PF PF QLL V PAAS LPE Y+ LMT +NS
Sbjct: 97 FYPYHYAPFASDLKGLGELNISFNLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQNS 156
Query: 614 PILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
PI+++YP +F D+NGK+ W+ + +PFIDE +L+ + VEH LT+EE RN
Sbjct: 157 PIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDETRLLAEVAKVEHTLTEEEARRN 210
>gi|159110732|ref|XP_001705612.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
gi|157433699|gb|EDO77938.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
Length = 1956
Score = 137 bits (346), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 188/461 (40%), Gaps = 120/461 (26%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGV + FR+I ERYP + DNLY+D N +IH + P F TE I
Sbjct: 1 MGVARLFRWIYERYPLAVTTPGASFVSRIDNLYIDFNALIHESIRKDSYIP-FTFTEAMI 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
F +I YI++L QP+K F+A DGVAP AK QQR RR+ A E K K
Sbjct: 60 FGEIADYIQVLVSTAQPRKRIFIATDGVAPDAKAKQQRTRRYMGAYE------KIGTKIY 113
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
R D +A A + EAE+L + G
Sbjct: 114 R-------------------------DSIAGTATV----------LSEAELLTSQHIANG 138
Query: 181 ----ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCV 236
+ LP + I+PGT FM RLH L FV + ++ W V
Sbjct: 139 NDDDQTLPPQNV--KAAISPGTLFMDRLHSFLIAFVAKNVDSEAPG--------WVQPSV 188
Query: 237 ILSGHETPGEGEHKIMDYIRYMK---------------SKPDYNPNMR-HCLYGLDADLI 280
+SG + GEGEHKIM IR ++ S ++ P+ HC+ GLDAD++
Sbjct: 189 TISGWDMCGEGEHKIMAEIRRLRQLEELAASRADCSETSFSEFFPHHESHCICGLDADIV 248
Query: 281 MLGLCTHEPYFSLLR-EEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYL--ELEFGK 337
+LGL H +LR + F + P + + ++ LS R+ + EL +
Sbjct: 249 LLGLGLHVHNVYVLRLWQPPFVADTVDILESKRHPTDRELIVVDLSCFRECIVAELISNR 308
Query: 338 LKEPGVL------SFPFS----IEN----------------------------------- 352
P +L SFP + ++N
Sbjct: 309 FHNPKLLHALCHQSFPHTYMQRLKNCYPRLSREMNDSGMLSRMSLNVLQEAFIWSPLASA 368
Query: 353 IIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVL 393
+I D++++ +GNDF+P +P + + N +L +Y+E+L
Sbjct: 369 LIVDFIILTLFVGNDFLPEVPGMLVKNNSLDNCIAIYRELL 409
>gi|67466759|ref|XP_649521.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56465985|gb|EAL44135.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449704666|gb|EMD44867.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 628
Score = 136 bits (343), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 143/591 (24%), Positives = 238/591 (40%), Gaps = 132/591 (22%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+ L ++AIDGV P AKM QQR RRF T + N ITPG
Sbjct: 79 PRNLLYIAIDGVCPIAKMIQQRKRRF---------------------TTDCLEGNAITPG 117
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T M ++ + F+ ++ L W+ + VI+SG PGEGEHKI++YIR
Sbjct: 118 TELMEKISVGIESFILNQMNNK-------GLDYWRRIKVIVSGVHVPGEGEHKIIEYIRS 170
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
+ N H +YG DADL++L L H +LR++ + NK GS+
Sbjct: 171 QER-----INESHVIYGEDADLLLLSLVLHYDSIFILRKDTRQIFDKNKKGSKPARNGTG 225
Query: 318 KFFLLHLSLMRDYLELE---------------FGKLKEPGVLSFPFSIENII-------- 354
K +M+D ++ FG + ++ F F+ ++I
Sbjct: 226 K-----SKVMKDKIKKVENEKIEKEKKELKKVFGSDDDEFLIPFEFANISLISKKLLELS 280
Query: 355 -------------DDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYIN 401
+D++ + + GNDF+PN+ + I GAL + +Y + L + I
Sbjct: 281 SQYENSIERLELENDFIYLMSIAGNDFLPNIEGIDIYAGALNTVLNIYFQ-LHSKGIKIT 339
Query: 402 EGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLA 461
E G +N F T+LA EQ + +E +M + + ++ D
Sbjct: 340 ENGKVNNNGVLAFFTELAQ--HEQ--------RLIESQMKTRRGSA--QPICGFINIDTN 387
Query: 462 ALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKV 521
+IK Y + Y + Y+ +++E
Sbjct: 388 KIIKLGQSGYKE---------RYVQTYFMNKEE--------------------------- 411
Query: 522 TNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF---SHLNLKYEM 578
++D + Y+ + W +YY SW W Y HYAP + D+ E
Sbjct: 412 ---YIKDSVKSYLEGMNWVFNYYCGNAFSWKWGYKCHYAPLLCHFVDYFQPVEFTTIAED 468
Query: 579 GEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVV 638
P P +QL+AVLP S L+P+ Q + L + PE+ D +G+ ++ +
Sbjct: 469 DGPIHPIEQLIAVLPPKSIHLIPKQLQEIYNLPEFK--KTIPEQVIIDAHGQDVSYKGIA 526
Query: 639 LIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNV-NLGTALAP 688
L+ F D + + +++ L E RN+ +++ Y+ + N T + P
Sbjct: 527 LVGFPDISLIHQYVESHIKELNKLEVIRNQLSQEVLFVYNKIPNFSTIIQP 577
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 30/136 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE-YQIP---------EFDNLYLDMNGIIHNCSHPNDND 50
MGVP +R++ + P LS +E + I EFDNLY+D+NG+IH+
Sbjct: 1 MGVPSLYRWLCKTVPNLSRKAKEQFDIDLTRNNPNGREFDNLYIDVNGLIHSS------- 53
Query: 51 PHFRITEKQIFQDIFHYIE----ILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 106
+KQ +++ +I+ + +++P+ L ++AIDGV P AKM QQR RRF +
Sbjct: 54 -----IDKQTIEEVIEHIQNQLMRIIMIVRPRNLLYIAIDGVCPIAKMIQQRKRRFTT-- 106
Query: 107 EAEVLEQKAKEKGERL 122
+ LE A G L
Sbjct: 107 --DCLEGNAITPGTEL 120
>gi|302684459|ref|XP_003031910.1| hypothetical protein SCHCODRAFT_68178 [Schizophyllum commune H4-8]
gi|300105603|gb|EFI97007.1| hypothetical protein SCHCODRAFT_68178 [Schizophyllum commune H4-8]
Length = 609
Score = 135 bits (341), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/480 (27%), Positives = 222/480 (46%), Gaps = 43/480 (8%)
Query: 777 VADQILGKTIFINYPHLIEIRVQAVAT---KDSRISFDKNSGP--VFERAAKDMQDAFQL 831
+A Q +G+ + N+P L E +V AV+ K +S + P V ++ ++
Sbjct: 17 IARQFIGQRTYANWPFLQEGKVVAVSDALFKYELLSVSPGAPPKVVSSPHSQAGLGHWKT 76
Query: 832 SKKSITDGYYTKLGVDIGNTEVLVYGQPVESR---------KYFFGPRGKVTQQRTFIRS 882
+ I D Y + GV G+ ++L++ +P++ K + GP ++ T ++
Sbjct: 77 KAERIQDVYSKRCGVLTGDVDILLHVRPLKGLTRLDTGAFVKDYEGPDKEI---ETALQM 133
Query: 883 TVTYAYQSAVLNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFI 942
V++ +++ E + E F G + F L YG V ST K+ S I
Sbjct: 134 AVSHVVSEDPRYMER-----EAPPLAEEFPDGTKIFFLGEHAYGVAAQVSSTTKDTLSVI 188
Query: 943 KLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGA 1002
F +++ + + YLPS+ VA L +S LSR T S ++ T +G
Sbjct: 189 LAFFPTEKQENEKFKAIVDHRKSARYLPSFQVAQMLGMSGRALSRITSSFMVV--TSDGN 246
Query: 1003 KRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSS 1062
K N+GL++KF K +VV ++R+ + + W ++E+ + L++ Y + +P+VF L D
Sbjct: 247 KT-NLGLSLKFEAKGMKVVDYSRK--SGRNWEFSEKAIDLLREYKQAYPDVFKAL-DQDG 302
Query: 1063 DDIYLRDDVFPHQ-GEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCE 1121
D + DV P + + RV ++ +WLK + E + ++V IE D
Sbjct: 303 DAMARASDVLPGENSDARVKEVKAWLKNKGVRDFEPVTLFCDQLGKEIVKEIETLADEFN 362
Query: 1122 KVEKQITLFVKPNKLYIPKPTLDKLCPDP----DTKFKLFDRVVNIRDCYTVPLGYRGTI 1177
K + F K IP+ + K P + KF L DRV I+D VPL +GT+
Sbjct: 363 -ASKSTSGFKKAIVKAIPRQAVLKPAHAPYRLQNQKFALGDRVTMIQDSGAVPLSVKGTV 421
Query: 1178 IGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNP 1235
IG+ + +M DVV+D PF G + RCS+ RG + +NLS + ++NP
Sbjct: 422 IGL-----NAKSM-DVVWDVPFMAGTTLGDRCSQYRGSTVEFNTCLNLS-NPQFVASTNP 474
>gi|407040580|gb|EKE40208.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 628
Score = 135 bits (341), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 150/593 (25%), Positives = 238/593 (40%), Gaps = 136/593 (22%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+ L ++AIDGV P AKM QQR RRF T + N ITPG
Sbjct: 79 PRNLLYIAIDGVCPIAKMIQQRKRRF---------------------TTDCLEGNAITPG 117
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T M ++ + F+ ++ L W+ + VI+SG PGEGEHKI++YIR
Sbjct: 118 TELMEKISVGIESFILNQMNNK-------GLDYWRRIKVIVSGVHVPGEGEHKIIEYIRS 170
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
+ N H +YG DADL++L L H +LR++ + NK GS+
Sbjct: 171 QER-----INESHVIYGEDADLLLLSLVLHYDSIFILRKDTRQIFDKNKKGSKPARNGTG 225
Query: 318 KFFLLHLSLMRDYLELE---------------FGKLKEPGVLSFPFSIENII-------- 354
K +M+D ++ FG + ++ F F+ ++I
Sbjct: 226 KS-----KVMKDKIKKVENEKIEKEKKELKKVFGSDDDEFLIPFEFANISLISKKLLELS 280
Query: 355 -------------DDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYIN 401
+D++ + + GNDF+PN+ + I GAL + +Y + L + I
Sbjct: 281 SQYENSIERLELENDFIYLMSIAGNDFLPNIEGIDIYAGALNTVLNIYFQ-LHSKGIKIT 339
Query: 402 EGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLA 461
E G +N F T+LA EQ + +E +M K + P
Sbjct: 340 ENGKVNNNGVLAFFTELAQ--HEQ--------RLIESQM---------KTRRGSAQPICG 380
Query: 462 ALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKV 521
+ + D L + Y+E Y Y+ K +Y
Sbjct: 381 FI------NIDTNKTIKLGQSGYKERYVQ-------------------TYFMNKEEY--- 412
Query: 522 TNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF---SHLNLKYEM 578
++D + Y+ + W +YY SW W Y HYAP + D+ L E
Sbjct: 413 ----IKDSVKSYLEGMNWVFNYYCGNAFSWKWGYKCHYAPLLCHFVDYFQPVELTTIAED 468
Query: 579 GEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVV 638
P P +QL+AVLP S L+P+ Q + L + PE D +G+ ++ +
Sbjct: 469 DGPIHPIEQLIAVLPPKSIHLIPKQLQEIYNLPEFK--KTIPEHVIIDAHGQDVSYKGIA 526
Query: 639 LIPFIDEVKLIKAMDAVEHL--LTDEERSRNRHGPMLVYTYSNV-NLGTALAP 688
L+ F D + LI +H+ L E RN+ +++ Y+ + N T + P
Sbjct: 527 LVGFPD-ISLIHQY-VEDHIKELNKLEVIRNQLSQEVLFVYNKIPNFSTIIEP 577
Score = 72.8 bits (177), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 30/136 (22%)
Query: 1 MGVPKFFRYISERYPCLSEVVREY----------QIPEFDNLYLDMNGIIHNCSHPNDND 50
MGVP +R++ + P LS +E+ EFDNLY+D+NG+IH+
Sbjct: 1 MGVPSLYRWLCKTVPNLSRKAKEHFDIDLTRNNPNGREFDNLYIDVNGLIHSS------- 53
Query: 51 PHFRITEKQIFQDIFHYIE----ILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 106
+KQ +++ +I+ + +++P+ L ++AIDGV P AKM QQR RRF +
Sbjct: 54 -----IDKQTIEEVIEHIQNQLMRIIMIVRPRNLLYIAIDGVCPIAKMIQQRKRRFTT-- 106
Query: 107 EAEVLEQKAKEKGERL 122
+ LE A G L
Sbjct: 107 --DCLEGNAITPGTEL 120
>gi|302853934|ref|XP_002958479.1| hypothetical protein VOLCADRAFT_108142 [Volvox carteri f.
nagariensis]
gi|300256207|gb|EFJ40479.1| hypothetical protein VOLCADRAFT_108142 [Volvox carteri f.
nagariensis]
Length = 1602
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 133/307 (43%), Gaps = 94/307 (30%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDN------LYLDMNGIIHNCSHPNDNDPHFR 54
MGVP F ++ RY ++ + + + +D LY+DMN IIH+C+H N
Sbjct: 1 MGVPGLFAFLKRRYGVIARFISKKEDGSWDGAAPADALYVDMNHIIHSCTHANTGSDGLP 60
Query: 55 ITEKQIFQDIFHYIEILFRMI------------------------QPKKLFFMAIDGVAP 90
E F+ + Y+ L + P +L F+AIDGVAP
Sbjct: 61 YDENAAFERMDAYLTALLEIADGGGAAAGADTAAAAAKATNSRPPSPLRLLFVAIDGVAP 120
Query: 91 RAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVA 150
AKMNQQR RRF SA AEV + +E
Sbjct: 121 IAKMNQQRTRRFLSAHVAEVTDHVEREV-------------------------------- 148
Query: 151 PRAKMNQQRGRRFRSAKEAEVLEQKAKEKGER-LP--TEKRFDSNCITPGTPFMCRLHQQ 207
RA+M Q G G R +P + RFD N I+ GT FM R+ +
Sbjct: 149 -RAEMTSQAG-------------------GSRTIPDTSSSRFDPNIISIGTVFMSRVADR 188
Query: 208 LRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPN 267
+R ++ K+ TD + + VI+S P EGEHKIM +IR+++++P+Y+PN
Sbjct: 189 VRAMLRTKVQTDPR---------FTQLRVIVSDSYEPAEGEHKIMRFIRHLRTRPEYDPN 239
Query: 268 MRHCLYG 274
RH +YG
Sbjct: 240 TRHIIYG 246
Score = 48.1 bits (113), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 365 GNDFIPNLP--DLHIINGALPLLYKVYQEVLPTLDGYINEG-GYLNLKRFEKFLTKLASF 421
GNDF+P++P D++ + L LL Y+E+LP + G I +G G +N R + KLA
Sbjct: 471 GNDFLPHVPSIDIYDLPSGLELLMVSYKELLPQMKGCITQGVGQINATRLTQLFNKLARD 530
Query: 422 DFEQFREKYA 431
+ F + A
Sbjct: 531 EEAAFVRRAA 540
>gi|390600636|gb|EIN10031.1| hypothetical protein PUNSTDRAFT_66463 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 625
Score = 135 bits (339), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 138/565 (24%), Positives = 242/565 (42%), Gaps = 75/565 (13%)
Query: 774 LKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDA----- 828
L+ +A++++GK +I +P L E V VA D ++K + + K +++
Sbjct: 14 LEDIAEEMIGKKAYIQWPFLQEGLV--VAISDPLFKYEK-AAIIAGTPTKVIKNPHSHQA 70
Query: 829 ---FQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVT 885
+++ SI + Y + GV G EVLV+ +P+ K G +
Sbjct: 71 LGFWKMKSDSIENHYSKRCGVITGEIEVLVHVRPLRGLKRM--EDGAFVKDYEGQDKEKE 128
Query: 886 YAYQSAVLNLQQARESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFI 942
A Q A+ + + + E F G + F L YG V ST ++ S I
Sbjct: 129 QALQMALSEISSEDPRFLERAAPPLSEEFPEGSKVFFLGEHAYGVAAQVSSTSEKTLSVI 188
Query: 943 KLSFKVQQEPDLSDLVHLQDDTVYN-YLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEG 1001
L+F + + + + V N ++PS+ V + +S LS+ T S ++ S +
Sbjct: 189 -LAFFPSDKSENEKFKEVVKNRVSNRFIPSFRVGDMVGLSGRALSKITSSFMVLTSDNQ- 246
Query: 1002 AKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHS 1061
+ N+GL++KF K +V+G++R++ + W +TEQ + LIK Y FPEVF L DH
Sbjct: 247 --KVNLGLSLKFEAKALKVIGYSRKE--NRYWEFTEQAIDLIKEYKAAFPEVFRQL-DHG 301
Query: 1062 SDDIYLRDDVFPH---QGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD 1118
+D+ DVFP + + +V ++ +WL ++ E +D V+ I+ D
Sbjct: 302 GNDMARATDVFPGSNAEADAKVKEVKAWLSKRGVRDFEPVSLFCDQLDKAAVAEIQKLAD 361
Query: 1119 ------TCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLG 1172
T ++K I + + P + +L + +F L DRV +RD VPL
Sbjct: 362 SFTENRTPATIKKAIVKGIPRQAVIKPSHAVYRLQ---NQRFGLGDRVTMVRDSGGVPLS 418
Query: 1173 YRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLC 1230
+G +IG+ DVV+D PF G + RC+ RG + + +NL+ + +
Sbjct: 419 VKGVVIGL------NPKSMDVVWDVPFMAGTTLGDRCAPYRGATVEFNSCLNLTEPQYIA 472
Query: 1231 GNSNPHVKNINVMQSRGERNTNYAQVTRQPQRTTFYKENAPLVNSNLQVTSPYHVKVSRC 1290
++NP V AP NS + H +
Sbjct: 473 -STNPQV------------------------------PTAPNTNSAFKPRFGPHPTIQPA 501
Query: 1291 NSQQSSVSQSPSSTMISQQSSPFNV 1315
N QQ++ + T++ Q +P ++
Sbjct: 502 NGQQAASGFRAAPTVVRHQGAPVHI 526
>gi|398013576|ref|XP_003859980.1| 5'-3' exonuclease, putative, partial [Leishmania donovani]
gi|322498198|emb|CBZ33273.1| 5'-3' exonuclease, putative, partial [Leishmania donovani]
Length = 486
Score = 135 bits (339), Expect = 3e-28, Method: Composition-based stats.
Identities = 105/352 (29%), Positives = 157/352 (44%), Gaps = 68/352 (19%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEKQ 59
MGVPKF +++ +YP + V + + LY+D+NG+IH C H +++DP + T+ +
Sbjct: 1 MGVPKFAAWLTRKYPSM---VMDSCPGDVHGLYIDLNGLIHPCCH-DEHDPSVALRTQGE 56
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF-RSAKEAEVLEQKAKEK 118
+ I IE L ++P+ + ++A+DGV PRAKMNQQR RR+ SA ++
Sbjct: 57 KLRSICLAIETLVVTVRPQHVIYIAVDGVVPRAKMNQQRARRYMSSAAPLTDTDKPIHGG 116
Query: 119 GERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPR-AKMNQQ-RGRRFRSAKEAEVLEQKA 176
G L T+ K+ DGV A ++Q G L + A
Sbjct: 117 GHELSA-------TIVAAIEKEFTQAECDGVERELADVSQALMGDVLYGGCATMALAEDA 169
Query: 177 KEKGE-------------------------------RLP----TEKRFDSNCITPGTPFM 201
EK E R P + +FDSNCI+PGT FM
Sbjct: 170 TEKAEAHTLGAAPWTTALTLASEGAEGACCAAAQVGRQPAAAASPAKFDSNCISPGTAFM 229
Query: 202 CRLHQQLRYFVKLKITTDKLWKD----------------TLSLWVWKDVCVILSGHETPG 245
+ +R +++ K+ K D + W + VI S T G
Sbjct: 230 DAVAAAVRDYIRHKLAPKK--NDDGGKAEAEAGASPAAINATCAHWAGLTVIFSDSNTAG 287
Query: 246 EGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE 297
EGEHKI D++R + P +N + H + GLDADLI L L H P +LR++
Sbjct: 288 EGEHKIFDFLRTQSAFPGFNGSGCHVIAGLDADLIFLSLSLHIPRVVILRDQ 339
>gi|71407725|ref|XP_806311.1| 5'-3' exonuclease XRNB [Trypanosoma cruzi strain CL Brener]
gi|70870021|gb|EAN84460.1| 5'-3' exonuclease XRNB, putative [Trypanosoma cruzi]
Length = 979
Score = 134 bits (337), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 148/316 (46%), Gaps = 33/316 (10%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRIT-EKQ 59
MGVPKF +++++YP E+V + + LY+D+NG+IH C H ++ DP E++
Sbjct: 1 MGVPKFASWLTKKYP---EMVSDVIPADVHGLYIDLNGLIHPCCH-SERDPSVAARPEEE 56
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPR-------AKMNQQRGRRFRSAKEAEVLE 112
Q I +E+L ++P + ++A DGVAPR A+ R + S E
Sbjct: 57 KLQCICCEVEVLLATVRPHDILYIATDGVAPRAKMNQQRARRYMSRAKIMSSGTEVVEEV 116
Query: 113 QKAKEKGERLPTEKRFDFITLKFCFPKKLFFMA---------IDGVAPRA-KMNQQRGRR 162
+ E + D I + L+ ++GVA A +
Sbjct: 117 VREFTPNEMAEADDDLDDIR-QLLMQDALYGGVMVQDDTTETLNGVANIADSLTPVTPCH 175
Query: 163 FRSAKEAEVLEQKAKEKGERLPTEK--RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
+S E A G T + FDSNCI+PGT FM ++ + V+ K+T
Sbjct: 176 DKSNNHEAHAETWAAFDGLTDGTMEVTEFDSNCISPGTAFMVKVTNAILTMVQDKLTN-- 233
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
D L W + V+ SG TPGEGEHKI+D++R S P +N H + GLDADLI
Sbjct: 234 --GDPL----WAGLRVVFSGANTPGEGEHKIVDFLRTQSSYPGFNGKGAHVIAGLDADLI 287
Query: 281 MLGLCTHEPYFSLLRE 296
L L H P+ LLR+
Sbjct: 288 FLSLSLHIPHILLLRD 303
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 134/327 (40%), Gaps = 72/327 (22%)
Query: 353 IIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY-QEVLPTLDGYINEGGY-LNLKR 410
+IDD+++MG L+GNDF+P LP + L ++Y VLP G++ G + + L +
Sbjct: 472 VIDDFIVMGMLMGNDFLPRLPGAFCGESVMDNLLELYVSNVLPY--GFLTSGYHEIYLPQ 529
Query: 411 FEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD 470
++ L A + +FR +F+ + +M P AA
Sbjct: 530 LQRLLRSYAKIETVKFR---------------RFA-----LSNNKMTPKEAA-------- 561
Query: 471 YDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQA 530
E YS DE+WR + + G L +
Sbjct: 562 ---------------EPLYSPLDEQWRQTYLTSTGLTGN----------------LEEAC 590
Query: 531 ECYIRAIQWNLHYYYNGC--VSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLP---- 584
+ Y+ +++ YY SWSWYYP H+AP+ DI D+ + P L
Sbjct: 591 KKYVEGLRFVWRYYSGNASTCSWSWYYPFHHAPFALDIADYLQRCDLTNLPSPPLETTPP 650
Query: 585 --FQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK-KQDWEAVVLIP 641
F QLL +LP S LLP ++M + E +P + D +D+ A VL+P
Sbjct: 651 DMFLQLLCILPPTSHALLPAVLGDVMLNPPEELRETFPSMWRVDYTAAYGKDYLAEVLLP 710
Query: 642 FIDEVKLIKAMDAVEHLLTDEERSRNR 668
F + +L + +++ T EE+ R R
Sbjct: 711 FANVSELRELVESSRPYFTKEEQERGR 737
>gi|339906034|ref|YP_004732831.1| hypothetical protein WIV_gp048 [Wiseana iridescent virus]
gi|308051904|gb|ADO00391.1| hypothetical protein [Wiseana iridescent virus]
Length = 566
Score = 134 bits (336), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 144/560 (25%), Positives = 234/560 (41%), Gaps = 140/560 (25%)
Query: 144 MAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCR 203
+ IDGVAP +K QQR RRF S K T FDSNCI+PGT F+ +
Sbjct: 113 LCIDGVAPISKQIQQRQRRFLSKK-----------------TNGGFDSNCISPGTEFLYK 155
Query: 204 LHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPD 263
L L+ ++ K+ D W + +++ + PGEGEHK+ D++R ++K
Sbjct: 156 LGLYLKSNIEKKLEKD--WLNVTTIYFMDSL--------VPGEGEHKLFDFLRSNQAKI- 204
Query: 264 YNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLH 323
N NM + G DADLIML L + L+E + + + + +T ++ + L+
Sbjct: 205 INENMGIIVVGNDADLIMLSLLISTIF---LKENLIYILRED------LTSKKLDYLLIS 255
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALP 383
++ ++ + L F +++P + F E ++ D+V++ F++GNDF+P +P +I +G L
Sbjct: 256 ITQLKKNI-LNFA-MEKPKFKHYDF--EYVVCDFVILCFMVGNDFLPPIPLFNIYDGGLD 311
Query: 384 LLYKVYQEVLPTLDGYI-----------NEGGYLNLKRFEKFLTKLASFDFEQFREKYAD 432
L+ K Y T GY+ + +NLK K+ L Q + Y
Sbjct: 312 LMMKYYF----TTPGYLTNVPLSNTVQGTKNLKINLKNLMKYFNHLLVVTSPQAIQHYKT 367
Query: 433 IQY----------------LEGKMGKKFS--DVFHKEKSKEMDPDLAALIKATDDDYDDG 474
+Y LEG F + HK K L L Y
Sbjct: 368 REYGFPNILLDIASKKEITLEGITSHYFKSYSIHHKINKK-----LVQL-------YVKE 415
Query: 475 TEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYI 534
E V NY Y Y +W+ + S+F D HY
Sbjct: 416 IEWVFNY-----YTYGGFTVDWKMYYPSQFAPTPVDLLHY-------------------- 450
Query: 535 RAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPA 594
++ + H + C + S H P F QLL +LP
Sbjct: 451 --LKTSKHQFAQSCGT-SIPQTHQIDP-----------------------FYQLLCILPP 484
Query: 595 ASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDA 654
S +LLP+P N + LEN + ++P+E DL+GK +WE + ++P ++ ++ A
Sbjct: 485 HSSDLLPKPL-NKVLLEN--LSHFHPKEIDIDLSGKLNEWEGIPILPPLNHNEIFNIYTA 541
Query: 655 VEHLLTDEERSRNRHGPMLV 674
L + ++ RN+ L+
Sbjct: 542 NIKLCSKDDLKRNKSSNQLM 561
Score = 45.8 bits (107), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 60/137 (43%), Gaps = 32/137 (23%)
Query: 1 MGVPKFFRYISERYP------------CLSEVVR--EYQIPEFDN---LYLDMNGIIHNC 43
MG+ FF++ + +P L + + E + +N L LD+NGIIH
Sbjct: 1 MGIKYFFKWFKDSFPKTVKKPFGREDQNLRDALANCEDDVDGLNNPFLLLLDLNGIIHTS 60
Query: 44 SH---------PND---NDPHFRITEKQ--IFQDIFHYIEILFRMIQPKKLFFMAIDGVA 89
P P EK +F+D+ + I L I PK++ + IDGVA
Sbjct: 61 CQKIYKYGSFEPKSLLKKSPPINSGEKDLLVFEDVLNSINSLVVKIDPKEIV-LCIDGVA 119
Query: 90 PRAKMNQQRGRRFRSAK 106
P +K QQR RRF S K
Sbjct: 120 PISKQIQQRQRRFLSKK 136
>gi|123432925|ref|XP_001308510.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121890194|gb|EAX95580.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 966
Score = 134 bits (336), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 142/298 (47%), Gaps = 41/298 (13%)
Query: 127 RFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTE 186
RF I + P KL ++++DG AP AK +QR RRF + EV E
Sbjct: 64 RFLDILVHVVQPTKLLYISVDGPAPLAKCIEQRSRRFSGQGKKEVAEG------------ 111
Query: 187 KRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGE 246
F N IT GT FM LH ++ ++K ++ D +W +I + TPGE
Sbjct: 112 --FTKNSITIGTKFMNDLHLKILDYLKERVNRDPIWAMP---------HIIYDSYHTPGE 160
Query: 247 GEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLRE---EVKFNTK 303
GEHK++++IRY +++ +N + C+Y DAD+ + L TH ++L++ ++K K
Sbjct: 161 GEHKLINFIRYQRAQGTWNEDYSCCIYSPDADIFFIALNTHMKKIAILKDSSGDLKLADK 220
Query: 304 SNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFL 363
K S V F ++LS++R L EF E V NI DD+ + L
Sbjct: 221 --KYNSASVRFWAGDFIYVYLSILRQLLAAEFFNSNEDMV-------NNITDDFCAISSL 271
Query: 364 IGNDFIPNLPDLHI--INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLA 419
+GNDFIP+ P +I N AL + + Y LP YI E G N FL +A
Sbjct: 272 LGNDFIPSFPFFNIDNFNNALEVYFTQY---LPK-SKYIVENGEFNYSNLSDFLRDVA 325
Score = 80.9 bits (198), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGV FF+++ RYP + P FD ++D N IIHN + E ++
Sbjct: 1 MGVAGFFKWLISRYPSICRGASSGISPSFDCFFVDFNCIIHNAIRTIQGSKD--LIEDEL 58
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 116
++ +++IL ++QP KL ++++DG AP AK +QR RRF + EV E K
Sbjct: 59 ITEVLRFLDILVHVVQPTKLLYISVDGPAPLAKCIEQRSRRFSGQGKKEVAEGFTK 114
Score = 50.1 bits (118), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 539 WNLHYYYNGCVSWSWYYPHHYAPYISDI-KDFSHLNLKYEMGEPFLPFQQLLAVLPAASK 597
W L+ Y G +SW WYYP+ AP + I K + G P + L+++LPA S
Sbjct: 378 WVLNLYTKGILSWEWYYPYSSAPPLLIISKYLQGYKPNFTQGAPPKSLEVLVSLLPANSA 437
Query: 598 ELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEH 657
LLP Q + SP+ + ++G + + + EVK K + E+
Sbjct: 438 NLLPSCLQ-FLAEPGSPVYDI--------MSGSARSFTR----EYFAEVK--KIIQEKEN 482
Query: 658 LLTDEERSRN 667
+TDEE+ RN
Sbjct: 483 EMTDEEKIRN 492
>gi|284504336|ref|YP_003407051.1| XRN1 5'-3' exonuclease [Marseillevirus]
gi|282935774|gb|ADB04089.1| XRN1 5'-3' exonuclease [Marseillevirus]
Length = 490
Score = 133 bits (335), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 166/661 (25%), Positives = 250/661 (37%), Gaps = 181/661 (27%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP F +I +R+ + +++ + E DNLY+D +H C+
Sbjct: 1 MGVPGLFYWIQQRHAQHTRTIQKREPIEVDNLYIDAVCFVHTCA---------------- 44
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
QD++ Y G ++ + +K KE E
Sbjct: 45 -QDVYGY-------------------------------GNSVSFSETYKNFTEKQKEL-E 71
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+ F K+ P K F++ DGV+P AK +QQR RRF +
Sbjct: 72 VFRLTRNAIFALTKYVRPTKRFYVLFDGVSPVAKQSQQRHRRFLGS-------------- 117
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
PTE FD N IT GT F+ RL +R ++ + +K +I S
Sbjct: 118 ---PTEG-FDPNSITCGTEFLDRLQGYVRRGLENFCSKEKFE-------------LIFSD 160
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
GEGEHK + + R P HC Y D DL++L + P LLR++
Sbjct: 161 TSIAGEGEHKALFFAR------QNGPEESHCFYSPDGDLVILAMTLEFPKTFLLRKD--- 211
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
H+ R L + +S F E I D+V +
Sbjct: 212 ----------------------HIQQWRHLL-------TDISGISQEFEKEIPIKDFVFL 242
Query: 361 GFLIGNDFIPNLPDLH--IINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKL 418
L+GNDF+P L + A LL K Q+ L G +L F K L L
Sbjct: 243 SCLLGNDFLPRLGMFEGKFSDTAEFLLAKYKQKGLHIFSR--KTGKFLAKNTF-KILKFL 299
Query: 419 ASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEV 478
+F+ E F E+ Y E K+K + +D L + DG V
Sbjct: 300 GTFEKELFDERC----YFE----------LTKQKEERVDRTLLSAY--------DGKSGV 337
Query: 479 LNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQ 538
+ Y+E EFG K + +N+ R+ Y+R
Sbjct: 338 -DMDKYKE----------------EFGLKK-----------QRSNQQTRE----YLRGCL 365
Query: 539 WNLHYYYNGCVSWSWYYPHHYAPYISDI--KDFSHLNLKYEMGE-PFLPFQQLLAVLPAA 595
W YY GC W Y + Y P++SDI +D H + + F QLL VLP
Sbjct: 366 WVTLYYTQGCPDNGWSYKYFYPPFLSDIEQEDLVHEPFEQTLAHNQFSQLLQLLCVLPPH 425
Query: 596 SKELLPEPYQNLMTL-ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDA 654
S LLP ++ + + + E+YP+E D GK +D+E+V L+P +D K+ + +
Sbjct: 426 SSHLLPRKWKKYACVYQRKELAEFYPKEIEVDYEGKFRDYESVPLLPHVDVSKVRRCCET 485
Query: 655 V 655
+
Sbjct: 486 L 486
>gi|367037641|ref|XP_003649201.1| hypothetical protein THITE_40223, partial [Thielavia terrestris
NRRL 8126]
gi|346996462|gb|AEO62865.1| hypothetical protein THITE_40223, partial [Thielavia terrestris
NRRL 8126]
Length = 120
Score = 132 bits (332), Expect = 2e-27, Method: Composition-based stats.
Identities = 61/96 (63%), Positives = 78/96 (81%)
Query: 34 LDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAK 93
LDMNGIIHNC+H + +D HFR++E+++F IF+YIE LF I+PKKLFFMA+DGVAPRAK
Sbjct: 1 LDMNGIIHNCTHKDSDDVHFRLSEEEMFIAIFNYIEHLFGKIKPKKLFFMAVDGVAPRAK 60
Query: 94 MNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
MNQQR RRFR+A +AE +KA +G+ LP E+ FD
Sbjct: 61 MNQQRARRFRTALDAERAREKAIREGKELPKEEPFD 96
Score = 89.0 bits (219), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/58 (70%), Positives = 48/58 (82%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCIT 195
PKKLFFMA+DGVAPRAKMNQQR RRFR+A +AE +KA +G+ LP E+ FDSNCIT
Sbjct: 44 PKKLFFMAVDGVAPRAKMNQQRARRFRTALDAERAREKAIREGKELPKEEPFDSNCIT 101
>gi|407838780|gb|EKG00159.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative
[Trypanosoma cruzi]
Length = 1070
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 149/315 (47%), Gaps = 31/315 (9%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRIT-EKQ 59
MGVPKF +++++YP E+V + + LY+D+NG+IH C H ++ DP E++
Sbjct: 92 MGVPKFASWLTKKYP---EMVSDVIPADVHGLYIDLNGLIHPCCH-SERDPSVAARPEEE 147
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPR-------AKMNQQRGRRFRSAKEAEVLE 112
Q I +E+L +++P + ++A DGVAPR A+ R + S E
Sbjct: 148 KLQCICCEVEVLLAIVRPHDILYIATDGVAPRAKMNQQRARRYMSRAKIMSSGTEVVEEV 207
Query: 113 QKAKEKGERLPTEKRFDFI---TLKFCFPKKLFFM-----AIDGVAPRA-KMNQQRGRRF 163
+ E + D I ++ + F ++GVA A +
Sbjct: 208 VREFTPNEMAEVDDDLDDIRQLLMQDALYGGVMFQDDTSETLNGVANIADSLTPVTPCHD 267
Query: 164 RSAKEAEVLEQKAKEKGERLPTEK--RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKL 221
+S E A G T + FDSNCI+PGT FM ++ + V+ K+
Sbjct: 268 KSNNHEAHTEAWAAFDGLTDGTLEVTEFDSNCISPGTAFMVKVKNAILTMVQDKLAN--- 324
Query: 222 WKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIM 281
D L W + V+ SG TPGEGEHKI+D++R S P +N H + GLDADLI
Sbjct: 325 -GDPL----WAGLRVVFSGANTPGEGEHKIIDFLRTQSSYPGFNGKGAHVIAGLDADLIF 379
Query: 282 LGLCTHEPYFSLLRE 296
L L H P+ LLR+
Sbjct: 380 LLLSLHIPHILLLRD 394
Score = 86.3 bits (212), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 133/327 (40%), Gaps = 72/327 (22%)
Query: 353 IIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY-QEVLPTLDGYINEGGY-LNLKR 410
+IDD+++MG L+GNDF+P LP + L ++Y VLP G++ G + + L +
Sbjct: 563 VIDDFIVMGMLMGNDFLPRLPGAFCGESVMDNLLELYVSNVLPY--GFLTSGYHEIYLPQ 620
Query: 411 FEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD 470
++ L A + +FR +F+ +K KE L
Sbjct: 621 LQRLLRSYAKIETVKFR---------------RFALSNNKMTPKEAAGPL---------- 655
Query: 471 YDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQA 530
YS DE+WR + + G L +
Sbjct: 656 ------------------YSPLDEQWRQTYLTSTGLTGN----------------LEEAC 681
Query: 531 ECYIRAIQWNLHYYYNGC--VSWSWYYPHHYAPYISDIKDF------SHLNLKYEMGEPF 582
+ Y+ +++ YY SWSW+YP H+AP+ DI D+ ++L P
Sbjct: 682 KKYVEGLRFVWRYYSGNASTCSWSWHYPFHHAPFALDIADYLQRCDLTNLPPPPLETTPP 741
Query: 583 LPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK-KQDWEAVVLIP 641
F QLL +LP S LLP ++M + E +P + D +D+ A VL+P
Sbjct: 742 DMFLQLLCILPPTSHALLPAVLGDVMLNPPEELRETFPSMWRVDYTAAYGKDYLAEVLLP 801
Query: 642 FIDEVKLIKAMDAVEHLLTDEERSRNR 668
F + +L + +++ T EE+ R R
Sbjct: 802 FANVSELRELVESSRPYFTKEEQERGR 828
>gi|281201939|gb|EFA76147.1| hypothetical protein PPL_10728 [Polysphondylium pallidum PN500]
Length = 2230
Score = 132 bits (331), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 156/337 (46%), Gaps = 68/337 (20%)
Query: 353 IIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDG------YINEGGYL 406
+I+D+ +M L+GNDF+P+LP + I G++ L+ Y++ L + Y+ +G +
Sbjct: 590 MINDFTMMCMLLGNDFLPHLPTMAIKEGSIELMMTWYRDWLSSFKDESSTIQYLTDGPNI 649
Query: 407 NLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKA 466
N K F K L L+ ++ F +K LE KM KK ++F + + P L + +
Sbjct: 650 NYKPFHKLLLMLSKWESLYFPDK------LE-KMYKK--EIFRLDNLLKTSPHLESHRRN 700
Query: 467 TDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEV- 525
D D +NY YKL ++V
Sbjct: 701 LDGD--------INY--------------------------------YKLKIGVTIDKVE 720
Query: 526 --LRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSH---------LNL 574
D + ++ + W L YY GC +WSWYYP+HYAP ISD+ F ++
Sbjct: 721 ETANDICKAFVDGLAWVLRYYTVGCPAWSWYYPYHYAPLISDLAKFVEKQSQVYNDTKHI 780
Query: 575 KYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDW 634
++ G P P+ LL+VLP S +LLP + + E +P+ + E F D NG++ W
Sbjct: 781 VFDYGAPLEPYIHLLSVLPHYSSKLLPPKLADSIVREPAPLSRLFEERFRIDPNGEEVSW 840
Query: 635 EAVVLIPFIDEVKLIK-AMDAVEHLLTDEERSRNRHG 670
+ VVL+ FI+ L + A ++ L+ EE RN+ G
Sbjct: 841 KGVVLLDFINTNVLKEHASPIIKDQLSAEELERNKFG 877
Score = 117 bits (293), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 99/176 (56%), Gaps = 26/176 (14%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTE---KRFDSNCI 194
P L ++A+DGV PRAK +QR RRFRSAK+A+ +RLP++ + FDSNCI
Sbjct: 108 PTNLLYIAMDGVPPRAKAIEQRKRRFRSAKDAK------DALSKRLPSDPVFEPFDSNCI 161
Query: 195 TPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDY 254
+P T FMC++++ + + + + V +++S PGEGEHKI+D+
Sbjct: 162 SPATEFMCKVNEWVLTYAQALVKR------------MPSVSIVVSDASVPGEGEHKIIDF 209
Query: 255 IRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLRE---EVKFNTKSNKG 307
IR + + + H YG+DADLI LGL T +F +LR+ ++ +T N G
Sbjct: 210 IR--AHREHWPSDTSHVFYGMDADLIFLGLSTQLSHFFVLRDLGAQIYCSTCKNNG 263
Score = 80.9 bits (198), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 37/160 (23%)
Query: 1 MGVPKFFRYISERYP---CLSEVV---------------------------REYQIPEFD 30
MGVP F+++++E+YP C + ++ +E + +
Sbjct: 1 MGVPSFYKWLTEKYPKITCTNYLLENIENNNNNDNNNNENGNGNNNNNHGNKEKKKLRLN 60
Query: 31 NLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQ-DIFHYIEILFRMIQPKKLFFMAIDGVA 89
NLY+DMNG+IHN +H ++ + + + ++ ++ L +QP L ++A+DGV
Sbjct: 61 NLYIDMNGVIHNSTHAKNSTTLSPVESDDVCRMNLLKNLDELVGTVQPTNLLYIAMDGVP 120
Query: 90 PRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 129
PRAK +QR RRFRSAK+A+ +RLP++ F+
Sbjct: 121 PRAKAIEQRKRRFRSAKDAK------DALSKRLPSDPVFE 154
>gi|167379332|ref|XP_001735097.1| 5'->3' exoribonuclease [Entamoeba dispar SAW760]
gi|165903060|gb|EDR28720.1| 5'->3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 628
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 148/588 (25%), Positives = 240/588 (40%), Gaps = 126/588 (21%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+ L ++AIDGV P AKM QQR RRF T + N ITPG
Sbjct: 79 PRNLLYIAIDGVCPIAKMIQQRKRRF---------------------TTDCLEGNAITPG 117
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T M ++ + F+ ++ L W+ V VI+SG PGEGEHKI++YIR
Sbjct: 118 TELMEKISTGIESFILNQMNNK-------GLDYWRRVKVIVSGVHVPGEGEHKIIEYIRS 170
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ------- 310
+ N H +YG DADL++L L H +LR++ + +K GS+
Sbjct: 171 QERT-----NESHVIYGEDADLLLLSLVLHYDSIFILRKDTRQIFDKSKKGSKPARNGIG 225
Query: 311 -IVTPEETKFFLLHLSLMRDYLELE--FGKLKEPGVLSFPFSIENII------------- 354
++ + + + ++ EL+ FG + ++ F F+ ++I
Sbjct: 226 KSKVIKDKIKKIENEKVAKEKKELKKVFGSDDDEFLIPFEFANISLISKRLSELSSQYGN 285
Query: 355 --------DDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYL 406
+D++ + + GNDF+PN+ + I GAL + Y + L + I E G +
Sbjct: 286 PIERLELENDFIYLMSIAGNDFLPNIEGIDIYAGALNTVLSTYFQ-LHSKGIKITENGKV 344
Query: 407 NLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKA 466
N F +L Q+ +K +E +M K + P +
Sbjct: 345 NNNGVHTFFIELV-----QYEQKL-----IENQM---------KTRRGSAQPICGFV--- 382
Query: 467 TDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVL 526
+ D L + Y+E Y +T F ++ E +
Sbjct: 383 ---NIDTNKTIKLGQSGYKERYV-------QTYFMNK-------------------EEYI 413
Query: 527 RDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSH---LNLKYEMGEPFL 583
+D + Y+ + W +YY SW W Y HYAP + D+ + E P
Sbjct: 414 KDTVKSYLEGMNWVFNYYCGNTFSWKWGYKPHYAPLLCHFVDYFQPIEVTTIAEDDGPVH 473
Query: 584 PFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFI 643
P +QL+AVLP S L+P+P Q + L + PE D++G+ ++ L+ F
Sbjct: 474 PIEQLIAVLPPKSIHLIPKPLQAIYNL--PEFKKTIPEHVIIDVHGQDVSYKGTPLVGFP 531
Query: 644 DEVKLIKAMDAVEHL--LTDEERSRNRHGPMLVYTYSNV-NLGTALAP 688
D + LI EH+ L E RN+ +++ Y + N T + P
Sbjct: 532 D-ISLIHQY-VEEHIKELNKLELIRNQLSQEVLFVYYKIPNFNTIIEP 577
Score = 73.9 bits (180), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 30/136 (22%)
Query: 1 MGVPKFFRYISERYPCLSE-VVREYQIP---------EFDNLYLDMNGIIHNCSHPNDND 50
MGVP +R++ + P LS + + I EFDNLY+D+NG+IHN
Sbjct: 1 MGVPSLYRWLCKTVPNLSRRAIEHFDIDLTRNNPNGREFDNLYIDVNGLIHNS------- 53
Query: 51 PHFRITEKQIFQDIFHYIE----ILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 106
+KQ +++ +I+ + +++P+ L ++AIDGV P AKM QQR RRF +
Sbjct: 54 -----IDKQTIEEVIEHIQNQLMRIIMIVRPRNLLYIAIDGVCPIAKMIQQRKRRFTT-- 106
Query: 107 EAEVLEQKAKEKGERL 122
+ LE A G L
Sbjct: 107 --DCLEGNAITPGTEL 120
>gi|358378678|gb|EHK16359.1| hypothetical protein TRIVIDRAFT_8924, partial [Trichoderma virens
Gv29-8]
Length = 189
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 114/236 (48%), Gaps = 68/236 (28%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIP-------------------EFDNLYLDMNGII 40
MG+P FR++S +YP +S V+ + I E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEQTPITTEDGITIPVDTTQPNPNGEELDNLYLDMNGIV 60
Query: 41 HNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
H CSHP D E+++ ++F Y + + M++P+K+ +A+DGVAPRAKMNQQR R
Sbjct: 61 HPCSHPEDRPAP--ADEEEMMLEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSR 118
Query: 101 RFRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRG 160
RFRSA+EA+ E+ K E L +Q G
Sbjct: 119 RFRSAREAQEKEEDKKALIELL---------------------------------KRQNG 145
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKI 216
F +A V+ +K FDSN ITPGTPFM L LRY+ + K+
Sbjct: 146 GVFPAADSETVV-------------KKAFDSNSITPGTPFMDILALSLRYWCQYKL 188
>gi|409049068|gb|EKM58546.1| hypothetical protein PHACADRAFT_117592 [Phanerochaete carnosa
HHB-10118-sp]
Length = 626
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 220/478 (46%), Gaps = 46/478 (9%)
Query: 781 ILGKTIFINYPHLIEIRVQAVATKDSRISFDK------NSGPVFERAAKDMQDAFQLSKK 834
++G+ IF+ +P L E V AV+ DS ++K N V + SK
Sbjct: 1 MIGQRIFVGWPFLQEGMVSAVS--DSLFKYEKIVVVPGNPPKVVSNPHAQQGLSLWKSKA 58
Query: 835 SITDGYYTK-LGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVL 893
+ +Y+K GV G+ +VLV+ +P++ K G + A Q AV
Sbjct: 59 EKIEYFYSKRCGVITGDIDVLVHVRPLKGLKRL--ESGAFVKDYEGPDKETEQAAQMAVS 116
Query: 894 NL--QQAR-ESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQ 950
+ + AR E + E F G + F L YG V T K+ S + L+F +
Sbjct: 117 EVASEDARFMEKEAPPLSEEFPNGSKVFFLGEHAYGVAAQVFETTKDTLSIV-LAFFPSE 175
Query: 951 EPD---LSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNI 1007
+ D D+V+ + T Y PS+ VA+ + +S L ++R T + +I + ++HN+
Sbjct: 176 KADNDRFKDIVNKR--TSQQYFPSFKVANMVGLSGLSVARITSNFMVIMTD---GQKHNL 230
Query: 1008 GLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYL 1067
GL +KF K +V+ ++R+D + W ++E+ V L+ Y ++PEV L+ D +
Sbjct: 231 GLGLKFEAKGLKVIDYSRKD--GRHWEFSEKAVDLLHEYKGRWPEVMAVLR-RPGDAMVT 287
Query: 1068 RDDVFPHQG--EQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTC----- 1120
DVFP+ + V ++ +WLK + E + + V IE D+C
Sbjct: 288 SADVFPNADNPDANVREVQAWLKSKSVRNFEPVSLFCDQLKKETVKEIEAFADSCTTKQS 347
Query: 1121 -EKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIG 1179
+ ++K I + + P + +L + F L DRV ++D VPL +G IIG
Sbjct: 348 RDAIKKAIVKGIPRQAVLKPAHAVYRL---QNQHFALGDRVTMVQDSGGVPLSVKGVIIG 404
Query: 1180 IVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNP 1235
+ + +M DVV+D PF G + RCS+ RG + + +NL+ + ++NP
Sbjct: 405 M-----NAKSM-DVVWDVPFMSGTTLGDRCSQYRGSTVEFTSCLNLT-NSQFIASTNP 455
>gi|393910763|gb|EJD76028.1| hypothetical protein LOAG_16951 [Loa loa]
Length = 159
Score = 130 bits (327), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 99/154 (64%), Gaps = 30/154 (19%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------YQIP-----------EFDNLYLDMNGIIH 41
MGVP FFR+++ +YP + + V E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTRKYPSVIVDAVEEKPRDMNGVRIPVNTVDPNPNFQEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDN-DPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGR 100
C+HP D P TE+++F IF YI+ LF +++P+KL +MAIDGVAPRAKMNQQR R
Sbjct: 61 PCTHPEDRPSPK---TEEEMFTLIFEYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
Query: 101 RFRSAKEA-EVLEQKAKEK------GERLPTEKR 127
RFR++KEA E +EQ A+ + G LP EK+
Sbjct: 118 RFRASKEAIEKVEQIAETRSRLESEGYPLPPEKK 151
>gi|402224897|gb|EJU04959.1| hypothetical protein DACRYDRAFT_20531 [Dacryopinax sp. DJM-731 SS1]
Length = 685
Score = 130 bits (327), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 217/479 (45%), Gaps = 40/479 (8%)
Query: 775 KQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERA-----AKDMQDAF 829
+++A+Q++GK +F+N+P L E AV+ + F G V + M D +
Sbjct: 10 EELAEQLVGKRVFLNWPFLQEGLCVAVSDQH----FIHEEGLVAGETRIVTKPQTMPDTW 65
Query: 830 QLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQ 889
+ I Y + V G+ + LV+ +P+ K G + + A Q
Sbjct: 66 RRKADKIEHIYSKRFAVLTGDIDALVHVRPLRGLKRL--DTGAFVKDYEDADKEIEQAVQ 123
Query: 890 SAVLNLQQARESL---EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSF 946
AV + + E + E F G + L YG V T + + L+F
Sbjct: 124 LAVTEVFSEDQRFLEKEAPPLSEEFPDGSKVIFLGEHAYGVAAQVRETSATSLTVV-LAF 182
Query: 947 KVQQEPDLSDLVHL-QDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRH 1005
++ + + L + + Y+ ++ V+ L IS L +R T S +I T+EG K
Sbjct: 183 FPNEKAENDQFIQLVRSRPLDRYIEAHLVSRMLGISGLAFARITSSFMVI--TKEGQKT- 239
Query: 1006 NIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDI 1065
NIGL++KF K +V+G+TR+ + W ++E+ + LI+ Y KQF F D DD+
Sbjct: 240 NIGLSLKFEAKGMKVLGYTRKGR-GRNWEFSEKAIQLIREY-KQFAPDFFHRLDQRRDDV 297
Query: 1066 YLRDDVFPH-QGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD------ 1118
+ D+FP + RV +I +WL ++ E + +D V IE +
Sbjct: 298 TMAQDLFPSGDSDARVKEIRNWLHDKGIPDLEPTSLLSEQLDKDTVGKIEQLANNFSSSK 357
Query: 1119 TCEKVEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTII 1178
+ + ++K + + + P T+ +L F L DRV ++D +VPL +G ++
Sbjct: 358 SADMIKKALVKGIPRQAVLKPSHTVYRLL---HQTFALGDRVTMVQDSGSVPLTVKGVVV 414
Query: 1179 GIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNP 1235
G+ TS D ++DV PF G + RCS+ RG + + +NLS+ + + ++NP
Sbjct: 415 GL--NTTSIDVVWDV----PFMSGTTLGSRCSQYRGSTVSFNSCLNLSHKQYVM-STNP 466
>gi|294884785|gb|ADF47408.1| exoribonuclease-1, partial [Dugesia japonica]
Length = 532
Score = 130 bits (326), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 126/227 (55%), Gaps = 6/227 (2%)
Query: 1007 IGLNIKFSRKNEEVVGFTRR---DETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSD 1063
IGL++K ++ N ++ G+ + + + KW Y+ +V+ ++ +Y ++FPEVF F+K + +
Sbjct: 31 IGLDLKNNKSNLQIPGWVMKVKCENSANKWVYSMKVIEVVNDYKEKFPEVFEFIKKPNFE 90
Query: 1064 DIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKV 1123
+ + D Q++ + +L P E ++ ++ IEH++D+ V
Sbjct: 91 KLSMEDVFDKEVLPQKLLDLQEYLNNLPFKNLERISNDCEIISDSNIAFIEHSMDSVTPV 150
Query: 1124 EKQITLFVKPN--KLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIV 1181
+ ++ + LY P +L + PD T ++L DRVV D YTVPLG +G +IGI
Sbjct: 151 VTNESCRIELDFRDLYTPHHSLHGVEPDKSTTYELLDRVVCSTDGYTVPLGLKGIVIGI- 209
Query: 1182 QGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
+ +++ D +V+FDK F + IR S+ R YRMP+ +IN++YG R
Sbjct: 210 EHKSNKDLRLEVLFDKVFKSAISIRGSKQRCYRMPSHTLINITYGMR 256
>gi|15078725|ref|NP_149475.1| 012L [Invertebrate iridescent virus 6]
gi|82013011|sp|Q9QSK5.1|EXON_IIV6 RecName: Full=Putative exonuclease 012L
gi|5725643|gb|AAD48147.1|AF083915_1 012L [Invertebrate iridescent virus 6]
Length = 624
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 174/729 (23%), Positives = 276/729 (37%), Gaps = 228/729 (31%)
Query: 1 MGVPKFFRYI----SERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRIT 56
MG+ FF+++ SE C+ R D L +DMNGIIHN +
Sbjct: 1 MGIKYFFKWLKTNHSESIKCID---RHDNSQCIDVLLIDMNGIIHNSA------------ 45
Query: 57 EKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 116
Q+++ Y F PK + A
Sbjct: 46 -----QEVYGYGSFSF----PK----------------------------------ENAC 62
Query: 117 EKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA 176
+K ++ D + ++F PK+L + IDGVAPR+K QQR RRF +A + + +
Sbjct: 63 DKKVYSLVCRQIDRMVIQFK-PKELI-LCIDGVAPRSKQIQQRQRRFLAAHDRKKPGTEF 120
Query: 177 KEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKI--------TTD---KLWKDT 225
+ T K FDSN I+PGT FM L + + +K K TTD W++
Sbjct: 121 NFDCNKGNTSK-FDSNSISPGTEFMHNLGRYIDIHIKKKQKPAFTGRETTDAPQNNWRNK 179
Query: 226 LSLWV--------WKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDA 277
W W ++ V+ + + GEGEHK++DYIR N +C+YG DA
Sbjct: 180 DQSWRQKVDDTAEWSNLTVVFANDKVSGEGEHKLLDYIRKYG-----NSYYTYCIYGSDA 234
Query: 278 DLIMLGLC----THEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHL-----SLMR 328
DLIML + T +LR+E K +P + L+++ +L++
Sbjct: 235 DLIMLSMSALTTTAIKNIYVLRDEYK-------------SPN---YLLINIPNFVKNLIK 278
Query: 329 DYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKV 388
D KL E + I+D++ M F++GNDF+P++P + I+ + +
Sbjct: 279 DVKSNWTDKLDE----------KRFINDFIFMCFMVGNDFLPHIPSIEIMTNGIESMLAF 328
Query: 389 YQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVF 448
Y + YI + L F++E D++ LE +
Sbjct: 329 YTKN----KNYITDNNGLG-----------EIFNYESLLPILKDLEGLEQSL-------- 365
Query: 449 HKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHK 508
E+V N EY+ D E +EFGQ K
Sbjct: 366 -------------------------CNEKV----NNSEYFRDDLLESSSFLVTNEFGQQK 396
Query: 509 -TDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI- 566
+ Y+ Y K E + + Y+ +QW L YY W W Y + YAP ++ I
Sbjct: 397 CVNINEYREKYMKKHFESSSEASLMYLEGMQWVLSYYTLKVPDWEWSYKYDYAPNLTSII 456
Query: 567 -----KDFSHLNLKYEMGEPFLP---------------FQQLLAVL-------------- 592
K + K + P FQ+ +++
Sbjct: 457 EAMSFKQIGGTSKKEKNQYKLFPVNSVNSTEVATSSSGFQKSFSMVFQNSLQNTKDWRDK 516
Query: 593 -PAASKELLPEPYQNLMTL--ENSPILEY-------------YPEEFATDLNGKKQDWEA 636
S + +P +Q L L ++S +L Y P+E D GK+Q+WE
Sbjct: 517 KTKTSSDAIPPFHQLLFILPPDSSDLLPYPLCEALTNELKIYAPKELIIDRAGKRQEWEG 576
Query: 637 VVLIPFIDE 645
+VL+P +D+
Sbjct: 577 IVLLPKLDQ 585
>gi|440298458|gb|ELP91094.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 608
Score = 128 bits (322), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 137/572 (23%), Positives = 238/572 (41%), Gaps = 119/572 (20%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+ L F++IDGV P AKM QQR RRF E D N ITPG
Sbjct: 79 PRSLLFISIDGVCPVAKMVQQRKRRFTPDNE---------------------DGNKITPG 117
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM ++ + F+ ++ + + L ++ + I+SG +PGEGEHKI+++IR
Sbjct: 118 TDFMEKISTGVESFILSQM-------NNVGLDYFRRIKTIVSGVHSPGEGEHKIIEFIRS 170
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR------EEVKFNTKSNKGGSQI 311
K + H + G DADL++L L H +LR ++ K+ G +++
Sbjct: 171 QKRVTE-----SHVICGEDADLLLLSLTLHTDNIFILRKFTPPTKQYSRPKKNGHGHAKV 225
Query: 312 VTPEETK-----------FFLLHLSLMRDYL---ELEFGKLKEPGVLSFPFSIENIIDDW 357
+ K F ++++L+ + L E GK + + +D+
Sbjct: 226 AKDKSAKSEKPQKSDVQLFDFVNITLLSNKLVSMSAEMGK---------EINRTQLENDF 276
Query: 358 VLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTK 417
V + L GNDF+PN+P + + +G+ + Y + ++ GG FLTK
Sbjct: 277 VFLMSLAGNDFVPNVPGVDVYSGSFKMALTCYFK--------LSSGGV--------FLTK 320
Query: 418 LASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEE 477
+F F+E ++ E M K + ++ + K T+ G
Sbjct: 321 NDDINFPAFKEFLEKLRENEEMMVKTMV----RTRTTTCPGVTGYVTKDTNKLVRIG--- 373
Query: 478 VLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAI 537
+ WR+ + Q +Y ++ + YI+ I
Sbjct: 374 ---------------EANWRSRYEKVLFQSNEEY--------------MKRGVKEYIKGI 404
Query: 538 QWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEM--GEPFLPFQQLLAVLPAA 595
W YY +SW + Y YAP ++ + + +++K + P P QL+ VLP
Sbjct: 405 VWVYLYYTGHPISWEFGYRPFYAPTLTMLNTYFEVDIKEVITPTPPLSPLVQLVLVLPPK 464
Query: 596 SKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
S LP P Q + E E P++ DLNG+ ++ + L+ F + + ++A
Sbjct: 465 SSRFLPLPLQTI--FEEDWFSEISPKKPTIDLNGECVGYKGIPLVNFPSIERAKEYVNAR 522
Query: 656 EHLLTDEERSRNRHGPMLVYTYSNV-NLGTAL 686
LT E++R+R +++ ++ + N G L
Sbjct: 523 ISSLTPLEKARDRVLDDILFVFNGIPNFGNVL 554
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 18/112 (16%)
Query: 1 MGVPKFFRYISERYPCLSEVVR-----EYQIP-----EFDNLYLDMNGIIHNCSHPNDND 50
MGVP F+Y+ P + R ++ P E+DNLY+D+NG+IH
Sbjct: 1 MGVPSLFKYLCRLVPNFTRRARWNDDFDFSQPNPNGREYDNLYIDLNGLIHGSLD----- 55
Query: 51 PHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
T +Q + + I L +++P+ L F++IDGV P AKM QQR RRF
Sbjct: 56 ---YTTIEQTIESLNQKILELVSIVRPRSLLFISIDGVCPVAKMVQQRKRRF 104
>gi|389750234|gb|EIM91405.1| hypothetical protein STEHIDRAFT_48337 [Stereum hirsutum FP-91666 SS1]
Length = 635
Score = 128 bits (321), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 219/487 (44%), Gaps = 46/487 (9%)
Query: 762 IIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDK----NSGP- 816
+I +++ + + VA +++GK FIN+P L E V V+ D ++K GP
Sbjct: 2 VIHIENMYEGKKAEDVARELIGKKTFINWPFLQEGLV--VSVSDPLFKYEKVRIVQGGPE 59
Query: 817 -VFERAAKDMQDAFQLSKKSITDGYYTK-LGVDIGNTEVLVYGQPVESRKYFFGPRGKVT 874
V M K + +Y+K GV G+ E+L++ +P++ K G
Sbjct: 60 KVVSNPHSQMGLGHWKGKTERINYFYSKKCGVLTGDIEMLLHVRPLKGLKRL--ENGAFV 117
Query: 875 QQRTFIRSTVTYAYQSAVLNLQQARESLEYKT-----IDEIFYPGCQCFALSNPHYGSGG 929
+ + + A Q +V + E Y + E F G + F L YG
Sbjct: 118 KDYEEAQKEIEQAVQMSVPEV--VSEDPRYAERAPPPLSEEFPEGSRIFFLGEHAYGVAA 175
Query: 930 CVISTVKEENSFIKLSF----KVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLL 985
V T ++ S + L+F K + E S ++ + Y PS+TVA L IS +
Sbjct: 176 QVSGTTEDSLSVV-LAFSPSDKAENEKFKSAVI---NRLPTKYYPSFTVAEILRISSRAI 231
Query: 986 SRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKN 1045
+R T S ++ S + + N+GL++KF K ++V+ ++R+D K W ++++ V L++
Sbjct: 232 ARITSSFMVLTSDNQ---KINLGLSLKFEAKAQKVLDYSRKD--GKFWEFSDKAVELLRE 286
Query: 1046 YMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGE--QRVAQIVSWLKEQPHAKAEVRPCGAA 1103
Y +++PEVF L D DD+ D+FP++ + + + SWL + E
Sbjct: 287 YREKYPEVFRLL-DRGGDDMARASDMFPNEADPNAKAKEARSWLATKGVRDFEPVSLFCD 345
Query: 1104 VVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLYIPKPTLDK----LCPDPDTKFKLFDR 1159
+ VS IE DT K + K IP+ + K + + +F L DR
Sbjct: 346 QLKKTTVSEIETLADTFNANRKSAAAYKKALVKNIPRRAVLKPTHAVYRLQNQRFALGDR 405
Query: 1160 VVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPA 1217
V ++D VPL +G +IG+ DVV+D F G + RCS+ RG +
Sbjct: 406 VTMVQDSGGVPLAAKGVVIGL------NTKNMDVVWDVAFMSGTTLNNRCSQYRGSTVDF 459
Query: 1218 QAMINLS 1224
Q+ +NL+
Sbjct: 460 QSCLNLT 466
>gi|409078654|gb|EKM79017.1| hypothetical protein AGABI1DRAFT_114526 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 569
Score = 127 bits (320), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 187/410 (45%), Gaps = 53/410 (12%)
Query: 840 YYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQAR 899
Y K GV G EVL++ +P++ K + ++ Y+ A ++QA
Sbjct: 2 YSKKFGVLTGRVEVLLHIRPLKGLKRL--------ENGALVKD-----YEDADKEIEQAL 48
Query: 900 ESLEYKTIDE-------------IFYP-GCQCFALSNPHYGSGGCVISTVKEENSFIKLS 945
+ + + E + +P G + F L YG V T S + L+
Sbjct: 49 QMCLSEVVSEDPRFLEREPPPLNVEFPDGSKVFFLGEHAYGVAAQVTGTTDTSLSVV-LA 107
Query: 946 FKVQQEPDLSDL-VHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKR 1004
F ++ ++ + + Y+PS+ A L ISP LSR T S ++ T ++
Sbjct: 108 FFPSEKAEMEKFKAVVNNRRASRYIPSFRAAESLRISPRALSRITSSFMVV--TGHDKQK 165
Query: 1005 HNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDD 1064
N+GL++KF K+ +VV +TR+D + W Y+E+ + L++ Y FPE+F L D SD
Sbjct: 166 INLGLSLKFEAKSLKVVDYTRKD--GRHWEYSEKAMELLREYKAAFPEIFRCL-DADSDA 222
Query: 1065 IYLRDDVFPHQG--EQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEK 1122
+ L DVF ++RV +I +WLK++ E + + V +E D+ K
Sbjct: 223 MALASDVFSESSKPDERVREIKAWLKQKGVTNLEPVSLFCDQLSKETVVELEQLADSLTK 282
Query: 1123 ------VEKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGT 1176
+K I + + P + +L + F L DRV +RD VPL +G
Sbjct: 283 SKSPSDFKKAIVKGIPRQAVLKPAHAVYRL---QNQWFGLGDRVAMVRDSGAVPLSVKGL 339
Query: 1177 IIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
+IGI + ++M DV++D PF GV + RCS RG + + +NLS
Sbjct: 340 VIGI-----NANSM-DVLWDVPFMSGVTLGDRCSPYRGMTVEFNSCLNLS 383
>gi|67596043|ref|XP_666049.1| pacman protein [Cryptosporidium hominis TU502]
gi|54656955|gb|EAL35817.1| pacman protein [Cryptosporidium hominis]
Length = 734
Score = 127 bits (319), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 101/167 (60%), Gaps = 12/167 (7%)
Query: 523 NEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF-----------SH 571
NE+ Y+R + W L YYY+G SW WYYP+HYAPY+ DI +
Sbjct: 111 NEISDQVCIHYLRGLSWVLGYYYHGVPSWDWYYPYHYAPYVMDIVELLSDVKNENKIKES 170
Query: 572 LNLKYEMGEPFLPFQQLLAVLPAASKEL-LPEPYQNLMTLENSPILEYYPEEFATDLNGK 630
L ++ +G+PF F+QL++VLP S ++ LP+ + N+M +N+P+ E+YP +F D NG
Sbjct: 171 LIGEFNLGKPFTQFEQLMSVLPPKSGKICLPKEFYNMMIDKNNPLSEFYPSKFKQDPNGN 230
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTY 677
KQ W+ V L+PFID+ L++ + +E+ + + RN+ G ++Y++
Sbjct: 231 KQRWKWVALLPFIDQKVLLETVIPLENEMDVLSKYRNKLGCDILYSF 277
>gi|380470784|emb|CCF47584.1| 5'-3' exoribonuclease, partial [Colletotrichum higginsianum]
Length = 278
Score = 127 bits (318), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 133/258 (51%), Gaps = 16/258 (6%)
Query: 608 MTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
MT NSPI ++YP +F D+NGK+ +WEAVV IPFIDE +L+ AM+ LL+ +++ RN
Sbjct: 1 MTNPNSPIYDFYPRDFELDMNGKRMEWEAVVKIPFIDEKRLLSAMEPKNKLLSQDQKERN 60
Query: 668 RHGPMLVYTYS---NVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPN----KLRKGL 720
G L +TY+ ++ ++L FP I+ H VE +I+ PN R GL
Sbjct: 61 GFGVALKFTYNPEVSITYPSSLL-GVFPDISPCHCVE------NIFELPNTEGLTYRNGL 113
Query: 721 CQDVNLKL-YVTHFPTLKHVQFTHK-IENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVA 778
V + + + FPTL + +T +EN V VFQ S+N S+I+ ++ + + A
Sbjct: 114 TDGVKINVEALAGFPTLHTLPYTAMLVENFGVNVFQADSKNPSMIVTLTDSELRTRAEQA 173
Query: 779 DQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITD 838
Q LGK F+ YP L E ++ V + D N V + D F I +
Sbjct: 174 SQKLGKRCFVGYPFLQEAKIVKVTDELFDYELDGNGSIVQKHHGPKDIDFFNKESGYIEN 233
Query: 839 GYYTKLGVDIGNTEVLVY 856
+ +LG+ I + E LV+
Sbjct: 234 WHSKRLGIVINSVESLVH 251
>gi|397626482|gb|EJK68154.1| hypothetical protein THAOC_10694 [Thalassiosira oceanica]
Length = 759
Score = 127 bits (318), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLK---YEMGEPFLPFQQLL 589
Y++ + W + YYY+GC SW WYYP HYAP+ SD+++ ++ EPF P +QL+
Sbjct: 136 YVKGLCWVMRYYYDGCPSWKWYYPFHYAPFASDLRNIERFQKDCDIFDKSEPFGPVEQLM 195
Query: 590 AVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLI 649
AVLP S+ +P+ + LM SPI+++YP++ D NGK W VVL+PFIDE +L+
Sbjct: 196 AVLPEDSRHAVPKGSRWLMRDSESPIIDFYPKDVPCDPNGKAMPWLWVVLLPFIDEGRLL 255
Query: 650 KAMDAVEHLLTDEERSRNRHG 670
A+ T +E N G
Sbjct: 256 DALRPTMAKWTQKELLCNSRG 276
>gi|330800198|ref|XP_003288125.1| hypothetical protein DICPUDRAFT_87898 [Dictyostelium purpureum]
gi|325081816|gb|EGC35318.1| hypothetical protein DICPUDRAFT_87898 [Dictyostelium purpureum]
Length = 171
Score = 126 bits (317), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 86/123 (69%), Gaps = 1/123 (0%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP+FFR++SERYP + + + + PE+DNLYLDMNGIIH CS N +E+++
Sbjct: 1 MGVPRFFRWVSERYPQILQKIIDSTPPEYDNLYLDMNGIIHACSQEFANS-LIEFSEEEL 59
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
+ + +Y++ LF I+P KLF+MAIDGVAPR+K+NQQR RRF S E L+Q+ G+
Sbjct: 60 IRKVCNYVDRLFHTIRPTKLFYMAIDGVAPRSKINQQRQRRFLSVHRDEKLKQQLIADGK 119
Query: 121 RLP 123
+P
Sbjct: 120 PVP 122
Score = 88.6 bits (218), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 67/106 (63%), Gaps = 10/106 (9%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P KLF+MAIDGVAPR+K+NQQR RRF S E L+Q+ G+ +P E F+ ITPG
Sbjct: 76 PTKLFYMAIDGVAPRSKINQQRQRRFLSVHRDEKLKQQLIADGKPVP-EVIFNRTAITPG 134
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHET 243
T FM L + L++++K KI+ D LS W++V VI SG E
Sbjct: 135 TQFMYNLSEALQFYIKKKISED------LS---WREVQVIFSGPEV 171
>gi|123428648|ref|XP_001307542.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121889177|gb|EAX94612.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 498
Score = 126 bits (317), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 142/302 (47%), Gaps = 53/302 (17%)
Query: 120 ERLPTEKRFDFITLKF------CFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLE 173
+RLP + + I +K PKK+ +A+DG P AK++QQR RR+ + +
Sbjct: 50 DRLPNQDLVNEIVIKIDELVKMARPKKIILIAVDGCPPTAKISQQRSRRYAYSANYQ--- 106
Query: 174 QKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKD 233
+ FD + + PGT FM L++ L + KIT D++W L+
Sbjct: 107 ------------DSSFDLSNVFPGTEFMINLNKLLESQLLNKITNDEIWSKA-KLYYSDV 153
Query: 234 VCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSL 293
C PGEGEHKI+D+IR + + P+Y+ + +Y +D D+I L L H P +SL
Sbjct: 154 FC--------PGEGEHKIVDFIRSISNDPEYSHSEWSYIYTVDTDVIFLALSIHNPNYSL 205
Query: 294 LREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENI 353
+ E + GSQ + ++H+ +R+Y+ +F +P E I
Sbjct: 206 IFEP--------QNGSQ--------YTVIHIDSIREYIFQQFEPYCKP-------DFERI 242
Query: 354 IDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEK 413
IDD+V + FL NDF +L + + Y+ L G+I G +N++ +K
Sbjct: 243 IDDYVFLSFLFKNDFFAGFKELEFCTQSKDTIITNYRAARKALGGFIVNGNDINIELLKK 302
Query: 414 FL 415
F+
Sbjct: 303 FI 304
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 7/104 (6%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHF--RITEK 58
MGVP + ++I R ++ + +DNLY+DMN II+ N +F R+ +
Sbjct: 1 MGVPGYLQWILTRISD-TQFHHSAKSSPYDNLYIDMNSIIYYAI----NKINFKDRLPNQ 55
Query: 59 QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
+ +I I+ L +M +PKK+ +A+DG P AK++QQR RR+
Sbjct: 56 DLVNEIVIKIDELVKMARPKKIILIAVDGCPPTAKISQQRSRRY 99
>gi|380481835|emb|CCF41612.1| 5'-3' exoribonuclease [Colletotrichum higginsianum]
Length = 544
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 170/335 (50%), Gaps = 21/335 (6%)
Query: 907 IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVY 966
I+E + G Q F L +YG ++ + I++S +EPD + + +QD
Sbjct: 51 IEEEYPTGTQAFFLGEYNYGRA-LEVTGHANNKANIRVSVLKNKEPDFAKPI-IQDMKRQ 108
Query: 967 N-YLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTR 1025
N Y PSY VA L++ PL+LS+ S + +++ G R N+GLN+KF K ++V+G+++
Sbjct: 109 NRYTPSYAVAKMLNLHPLILSKILSS-YQVNTV--GGLRVNLGLNLKFDAKKQKVLGYSQ 165
Query: 1026 RDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDH--SSD--DIYLRDDVFPHQGEQRVA 1081
+ ++ W ++ + L+ Y+ FP+ F ++ + SSD D L D P QRV
Sbjct: 166 KSDS--GWEFSNAAIELLARYIAAFPDFFAAIQQNPQSSDVSDTDLWKD--PKVAAQRVK 221
Query: 1082 QIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTC--EKVEKQITLFVKPNKLYIP 1139
+I +WLK +K E P A +D+ VV + A + + ++ + I
Sbjct: 222 EIGAWLKAAQTSKFERVPLEAEQLDSVVVMKLAEAGAQVFLQSHDVEVKNMKGVPRSAIM 281
Query: 1140 KPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPF 1199
KPT +L + KF L DRV + VPLG RGT++G+ T+ + + DVV+D F
Sbjct: 282 KPTDAELFLS-NQKFALGDRVSFLSSSGKVPLGSRGTVVGL--SRTANNLLLDVVWDLTF 338
Query: 1200 PHGVKI--RCSESRGYRMPAQAMINLSYGERLCGN 1232
G + R RG + + +++N +Y + + G+
Sbjct: 339 MSGTTLGERAPPFRGMTVASSSVLNTTYKQVVSGS 373
>gi|449689861|ref|XP_004212165.1| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Hydra
magnipapillata]
Length = 99
Score = 124 bits (311), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 65/72 (90%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVPKF+R++SERYPCLS+ +RE++IPEFDNLY+DMNGIIH CSHPND DPHF+ITE++I
Sbjct: 17 MGVPKFYRWLSERYPCLSQTIREHKIPEFDNLYIDMNGIIHPCSHPNDEDPHFQITEEEI 76
Query: 61 FQDIFHYIEILF 72
+IF YIE++
Sbjct: 77 MMNIFDYIELML 88
>gi|157111508|ref|XP_001651597.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108868328|gb|EAT32553.1| AAEL015316-PA, partial [Aedes aegypti]
Length = 188
Score = 124 bits (310), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 111/238 (46%), Gaps = 85/238 (35%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPE------------------FDNLYLDMNGIIH 41
MGVP FFR++S +YP + E V + Q E FDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECVEQKQTDEHGNPLYDDMTQPNPNKVEFDNLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP D P + E ++ IF I+ L +++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 61 PCTHPEDK-PAPK-DEDEMMVAIFECIDRLMNIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
Query: 102 FR-------SAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAK 154
FR A E + + + + KG LP EK
Sbjct: 119 FRASKEAAEKAAEVQKIRDELRAKGCILPPEK---------------------------- 150
Query: 155 MNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFV 212
EKG FDSNCITPGTPFM RL + L+Y+V
Sbjct: 151 -----------------------EKG------AHFDSNCITPGTPFMDRLSKCLQYYV 179
>gi|328869830|gb|EGG18205.1| hypothetical protein DFA_03692 [Dictyostelium fasciculatum]
Length = 1061
Score = 124 bits (310), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 189/412 (45%), Gaps = 52/412 (12%)
Query: 275 LDADLIMLGLCTHEPYFSLLREE-VKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLE- 332
LD+ LGL + F E +KF +K + +T E KF ++L +R Y++
Sbjct: 597 LDSSYFYLGLAEWD--FERANELFIKFGRALSKQEDEYLTVER-KFEFVNLDNLRQYIKY 653
Query: 333 -LEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQE 391
L FG E I N I+D +M L+GNDF+P+LP + I +G++ L+ Y++
Sbjct: 654 YLTFGLENES-----QLDINNCINDITVMCMLMGNDFLPHLPAVSIKDGSIELILGWYKD 708
Query: 392 VLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKE 451
+ I G +N +LT + + F E L +G S ++ +
Sbjct: 709 ---WIHNSIKSTGKVN------YLTVDTNIIYSNFSE-------LLNVLGNWESVIYPDK 752
Query: 452 KSKEMDPDLAAL--IKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKT 509
+ DLA L I + +D +E + +E + T+ + + +
Sbjct: 753 LERMGKKDLARLTHILKVSKEREDKEKEEAEANGRMASEFEEERNDILTSQLANLQEGEL 812
Query: 510 DYYHYKLDYAKVTNEVLRDQ-AECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI-- 566
+YY KL + E ++ + Y+R + W L YY GC W W Y HYAP +D+
Sbjct: 813 NYYKLKLQASTSEVENVKQWVCQSYVRGLSWVLKYYTVGCPDWKWSYNFHYAPLAADLAA 872
Query: 567 -----------KDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPI 615
KD SH+ K +G P P LL+VLP S + LP P +LM ++ +
Sbjct: 873 YCKEMVVGKGFKDTSHIEFK--LGAPLQPLAHLLSVLPVYSGKFLPAPLADLM--KSKQL 928
Query: 616 LEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
+Y E + DLNG++ W+ VVL+ FID + A++++ + + E+ S+N
Sbjct: 929 STFYRERYRIDLNGEEVSWKGVVLVNFID----VSALESLANPIA-EQLSKN 975
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 13/111 (11%)
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPG 245
+K FDSN I+P T FM +++ + ++ + + V+LS PG
Sbjct: 212 DKVFDSNSISPATEFMNKVNHWIGEYISTVLAKSH-----------PHLAVVLSDTTVPG 260
Query: 246 EGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLRE 296
EGEHKIMD+IR + +++ + H YG+DADLI LGL H F +LR+
Sbjct: 261 EGEHKIMDFIR--GNHKNWSESTSHIFYGMDADLIFLGLSVHLQRFFVLRD 309
Score = 74.3 bits (181), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 35/152 (23%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIP----------------------------EFDNL 32
MG+P F+R++ ++YP + ++ Q +F+NL
Sbjct: 1 MGIPAFYRWLVDKYPKSIQYFQQQQQVEEQQEQDEVSSSSTTTTPLKIDPRCNNVKFNNL 60
Query: 33 YLDMNGIIHNCSHPNDNDPHFRI------TEKQIFQDIFHYIEILFRMIQPKKLFFMAID 86
Y+DMNG+IHN +H I T+ I ++IF + + P L ++A+D
Sbjct: 61 YIDMNGVIHNSTHAKGEPSVESIMASKPNTDDTIKENIFKRLNDIIVTTNPSDLVYIALD 120
Query: 87 GVAPRAKMNQQRGRRFRSAKEA-EVLEQKAKE 117
GV PRAK +QR RRFRSAK+ E+L + K+
Sbjct: 121 GVPPRAKATEQRRRRFRSAKDIREILSKGPKQ 152
Score = 46.6 bits (109), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-EVLEQKAKE 178
P L ++A+DGV PRAK +QR RRFRSAK+ E+L + K+
Sbjct: 111 PSDLVYIALDGVPPRAKATEQRRRRFRSAKDIREILSKGPKQ 152
>gi|170574442|ref|XP_001892815.1| hypothetical protein Bm1_06725 [Brugia malayi]
gi|158601436|gb|EDP38350.1| hypothetical protein Bm1_06725 [Brugia malayi]
Length = 205
Score = 123 bits (309), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 69/96 (71%)
Query: 344 LSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEG 403
L F +++E++IDDW+LMGFLIGNDFIP+LP +HI ALPLLY Y EVLP LDGYINE
Sbjct: 14 LPFDYNLESVIDDWILMGFLIGNDFIPHLPHVHIHEDALPLLYATYNEVLPQLDGYINEA 73
Query: 404 GYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGK 439
G LNLKRF+ FL A D + F E+ D YL K
Sbjct: 74 GVLNLKRFQIFLKNFAKNDKKNFLEQMDDEAYLSSK 109
>gi|406601834|emb|CCH46557.1| 5'-3' exoribonuclease 1 [Wickerhamomyces ciferrii]
Length = 491
Score = 123 bits (308), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 202/477 (42%), Gaps = 89/477 (18%)
Query: 130 FITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRF 189
+T +C P KL ++AIDGV P K+ Q RR Q + G +
Sbjct: 59 MVTAAYC-PHKLLYIAIDGVPPLGKLKGQALRR-----------QSYIKSGNGI------ 100
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
D N +TPGT FM L Q F+ K T L K + +V VI+S PGEGE
Sbjct: 101 DPNALTPGTEFMNMLSQ----FIT-KCTGSHLPK------LSSNVKVIISDSNVPGEGEF 149
Query: 250 KIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGS 309
KI+++IR + + +M+ +YG+DADLI L L SL + +V + K G
Sbjct: 150 KIVNHIR------EQDIDMKVVIYGIDADLIALSL-------SLKQRQVFLARQKYKRGV 196
Query: 310 QIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFI 369
+ ++ ++ SL +LE + K + NI+ D VL+ L+GNDF+
Sbjct: 197 TTSRSRQCEYLIVS-SLKNKFLEPYSNEQKSS------LNTTNILKDIVLLLILLGNDFL 249
Query: 370 PNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREK 429
P L++ + L Q + I + ++ F KFL K FDF+ F E
Sbjct: 250 PKPEGLYVNSDTYYELSWFLQRFHREENKTIIKDNRIDTDVFTKFLKKFIEFDFQTFDES 309
Query: 430 YADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAAL-IKATDDDYDDGTEEVLNYANYEEYY 488
M +K D K + LA + I T+ D ++ +++ +EE
Sbjct: 310 TI--------MDQKVID------EKIISIKLAGISISNTEKDEEENVKKLAQMECFEE-- 353
Query: 489 YSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGC 548
HK Y L E+++ Y + + W L YY C
Sbjct: 354 ------------------HKKKVYEQNLCEKYDELELIKQ----YYKGLHWVLRYYLGKC 391
Query: 549 VSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQ 605
S+ + YP+ AP++SD+ + ++++ EP QL V+P S LLP Y+
Sbjct: 392 PSYDYVYPYDNAPFLSDLVKVNQ-DVEFVNTEPINALHQLALVIPKKSSILLPSRYK 447
Score = 47.8 bits (112), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
M +P F+ + E SE + + DNLY+DMN I H C ++ F+
Sbjct: 1 MAIPYFYSMLKEND---SECFKNGG-KQCDNLYIDMNCIFHICLRDAKSEKDFK------ 50
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
I +++++ P KL ++AIDGV P K+ Q RR
Sbjct: 51 -DLILAHLQMVTAAYCPHKLLYIAIDGVPPLGKLKGQALRR 90
>gi|392595105|gb|EIW84429.1| hypothetical protein CONPUDRAFT_50671 [Coniophora puteana RWD-64-598
SS2]
Length = 576
Score = 122 bits (307), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 212/470 (45%), Gaps = 43/470 (9%)
Query: 777 VADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLS---- 832
VA +++G+ F+ +P L E V AV+ + + + ER LS
Sbjct: 17 VAREMVGRRTFVGWPFLQEGTVVAVSDSLFKYEVMRVAPGAPERVVSTPHAPQALSHWKG 76
Query: 833 -KKSITDGYYTKLGVDIGNTEVLVYGQPVESRKY---------FFGPRGKVTQQRTFIRS 882
+ I Y K GV G+ +VLV+ +P++ K + GP ++ Q + S
Sbjct: 77 KAERIESFYSKKCGVITGDVDVLVHVRPLKGLKRLESGAFVKDYEGPEKEMEQAAQMVLS 136
Query: 883 TVTYAYQSAVLNLQQARESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFI 942
V A + ++A + + F G F L YG+ V S +E I
Sbjct: 137 EV--ACEDPRFMEKEA------PALADEFPEGSNIFFLGEHAYGTAARV-SKTEETTLSI 187
Query: 943 KLSFKVQQEPDLSDLVH--LQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEE 1000
L+F + D S+ +++ + Y ++ AS L +S LSR T S +++
Sbjct: 188 VLAF-IPASKDESERFREVVRNRVSHEYFLAHKAASMLGMSGRALSRITSSFMVLEPGAG 246
Query: 1001 GAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDH 1060
G K NIGL++KF K +V+ ++R++ ++W ++++ V LI+ Y +FPEVF L D
Sbjct: 247 GGKA-NIGLSLKFEAKALKVINWSRKE--GRQWEFSDRAVDLIREYKAKFPEVFRCL-DQ 302
Query: 1061 SSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTC 1120
+ D + +D++P ++ ++ WLKE+ E + +D V +E +
Sbjct: 303 NGDAMTRVEDIWPENSHAQLKEVKVWLKEKGVKDFEPVSLFSDQLDKATVGQLEELANDV 362
Query: 1121 EKV------EKQITLFVKPNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYR 1174
K +K I + + + P+ + +L + +F L DRV ++D +VP+ +
Sbjct: 363 AKTAQSTAYKKAIVKGIPRHAVLKPQHAVYRL---QNQRFVLGDRVTMVQDSGSVPMAVK 419
Query: 1175 GTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRCSESRGYRMPAQAMINLS 1224
G +IG+ S D ++DV F G RCS RG + + +NL+
Sbjct: 420 GVVIGL--NSKSMDVLWDVAFMAGTTLG--DRCSSYRGSTVEFASCLNLT 465
>gi|330804007|ref|XP_003289991.1| hypothetical protein DICPUDRAFT_80750 [Dictyostelium purpureum]
gi|325079889|gb|EGC33468.1| hypothetical protein DICPUDRAFT_80750 [Dictyostelium purpureum]
Length = 1065
Score = 122 bits (306), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 99/171 (57%), Gaps = 22/171 (12%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE--AEVLEQKAKEK----GERLP--TEKRF 189
P KL ++ IDGV PRAK +QR RRF+S KE A +L + K K E L K F
Sbjct: 81 PSKLLYIGIDGVPPRAKAVEQRRRRFKSVKESKANILTELKKSKPYVSDEELSEIQSKVF 140
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSN I+P T F+ +++Q ++ + + K++T++ + ++LS PGEGEH
Sbjct: 141 DSNSISPATEFIEKINQWIKEYCE-KLSTER-----------PSLTIVLSDSTVPGEGEH 188
Query: 250 KIMDYIRYMKSK--PDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEV 298
KIMDYIR SK + HC YG+DADLI LGL TH P F +LR+ +
Sbjct: 189 KIMDYIRSNHSKLIATGEKQLTHCFYGMDADLIFLGLETHLPNFYILRDSL 239
Score = 87.0 bits (214), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 73/127 (57%), Gaps = 12/127 (9%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIP--EFDNLYLDMNGIIHNCSHPNDNDPHF----- 53
MG+P FFR++ E YP +V+ I +FDNLY+DMNG+IHN + +
Sbjct: 1 MGIPLFFRWLVENYP---KVLANGYIDKIQFDNLYIDMNGVIHNSIKVDKRGKYGLIYKD 57
Query: 54 RITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE--AEVL 111
I ++ I Q ++ ++ + + P KL ++ IDGV PRAK +QR RRF+S KE A +L
Sbjct: 58 DIKDEDIKQSVYWRLDQMILSVNPSKLLYIGIDGVPPRAKAVEQRRRRFKSVKESKANIL 117
Query: 112 EQKAKEK 118
+ K K
Sbjct: 118 TELKKSK 124
>gi|281206449|gb|EFA80635.1| 5'-3' exoribonuclease [Polysphondylium pallidum PN500]
Length = 1127
Score = 121 bits (304), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 166/704 (23%), Positives = 304/704 (43%), Gaps = 107/704 (15%)
Query: 589 LAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKL 648
++VLP S LLP PY+ LM ++SPI ++YP+EF D + ++ + +I F D +L
Sbjct: 1 MSVLPPQSAYLLPAPYRRLMESDDSPIADFYPKEFEVDTSDPHY-FDGIAIIGFPDLARL 59
Query: 649 IKAM-DAVEHLLTDEERSRN--RHGPMLVYTYSNVNLGTAL-APD--YFPAINENHAVEK 702
++A D + LT ER RN RH V Y + + ++ P+ F + +++A +
Sbjct: 60 VEATKDEDSYDLTPRERMRNTLRHA---VIIYHDAQIEQSVETPNAKLFDDLEKSNATIE 116
Query: 703 PLYRDDIYVHPNK--LRK-GLCQDVNLKLYV-THFPTLKHVQFTHKIENAKVKVFQQPSR 758
L I PN+ L+ LC V + + + FPT + + F + N ++ SR
Sbjct: 117 EL----ILPEPNENSLKPFRLCDGVLVGNHSPSGFPTFQSIDFDWEYMNGVANLWGNTSR 172
Query: 759 NESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVF 818
+S+I+ ++ +L+ + ++GK ++N+P+ IE ++ + + I+ D V
Sbjct: 173 KDSMIVNPPLPELCTLRDLKP-LIGKRCYVNWPYHIEAKIVGFSDSNQHITRDSTIDYV- 230
Query: 819 ERAAKDMQDAFQLSKKSITDGYYTKLGVDIGN---TEVLVYGQPVESRKYFFGPRGKVTQ 875
A + +Q QL K Y + G++I + VLV+ Q + G R +
Sbjct: 231 --AFQKIQYLDQLKKLPFD---YLRRGINIKDLLENTVLVHVQKIVGVDTEVGGR----R 281
Query: 876 QRTFIRSTVTYAYQSAVLNLQQARESLEYKTIDEI-----FYPGCQCFALSNPHYGSGGC 930
+ + T+ Q ++ + + Y+ +E+ F G Q +++ HYGS G
Sbjct: 282 VKRYSDKEDTFPLQ-LMVEYDRVKADSRYEECEELPFEKRFPIGKQVIYVNSDHYGSVGT 340
Query: 931 VISTVKEENSFIKLSFKVQQ-EPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFT 989
V+ ++ ++L KVQ+ + ++D Y P V ++S +S T
Sbjct: 341 VLHHF---DNTLELELKVQKMDTKFGHQCAREED---EYYPIQQVCKMTNLSTQQISLLT 394
Query: 990 GSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTR----RDETT---KKWFYTEQVVTL 1042
G++FI +IGLN+KF+ + ++++G+ R D+T KKW ++ V +
Sbjct: 395 GALFI------DKPMTDIGLNMKFTGRQQQLLGYCRGITMSDKTGNSFKKWEFSSLAVEV 448
Query: 1043 IKNYMKQFPEVFGFLKDHSSDDIYLR----DDVFPHQGEQRVA---QIVSWLKEQPHAKA 1095
IK Y+ FP + L ++ D + + P + + RVA +I ++KE
Sbjct: 449 IKKYLAAFPVLNSILTMYADDKTGKKAIDISSLIPEKSD-RVALIKKIDEFMKESKIRHQ 507
Query: 1096 EVRPCGAAVVDAKVVSLIEHAVDTCEKVEK-QITLFVKPNKLYIP--------------- 1139
+ PC + + + +E K EK + P + P
Sbjct: 508 RLVPCDTITMKREAIKKVEDFYLKQSKHEKVSVITRTSPEHVIEPASYESVISYERHQSQ 567
Query: 1140 ---------KPTLDK--------LCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQ 1182
P+L L + F L DRVV + + +P G GT++ + +
Sbjct: 568 THLQQRNNNSPSLASSNISNGGFLESNKSKIFNLGDRVVTLLEKGNIPFGLYGTVVSVQE 627
Query: 1183 GETSYDAMYDVVFDKPF--PHGVKIRCSESRGYRMPAQAMINLS 1224
+ DVV D+ + + C E RG + + NLS
Sbjct: 628 HKV------DVVLDQECFSANSLDGFCLEKRGICISKWRVYNLS 665
>gi|393219170|gb|EJD04658.1| hypothetical protein FOMMEDRAFT_83761 [Fomitiporia mediterranea
MF3/22]
Length = 677
Score = 121 bits (303), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 129/531 (24%), Positives = 236/531 (44%), Gaps = 68/531 (12%)
Query: 762 IIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVAT---KDSRISF-DKNSGPV 817
I+ +Q+ + +++A +++G F+ +P + E V AV+ K ++SF D S V
Sbjct: 2 IVHIQNPREGEKTEKIAREMVGHRAFVGWPFVHEAMVVAVSDHLFKYEQVSFGDGRSTRV 61
Query: 818 FERAAKDMQDAFQLSKKSITDGYYTK-LGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQ 876
F +K + +Y+K LGV G EVL++ +P++ K
Sbjct: 62 LSNPHTPQAINFWKAKAEKIEHFYSKRLGVITGPVEVLLHVRPLKGLKRL--------DT 113
Query: 877 RTFIRSTVTYAYQSAVLNLQQARESL--------------EYKTIDEIFYPGCQCFALSN 922
F++ Y+ +QA + + E + E F G + F L +
Sbjct: 114 GAFVKK-----YEGQDNEFEQALQMVLPQVISEDPRFMEKEAPPLSEEFPTGSKVFFLGD 168
Query: 923 PHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTV-YNYLPSYTVASKLSIS 981
YG V T + S + L+F ++ ++ + + + Y PSY VA ++ IS
Sbjct: 169 HAYGVAAQVSETTVKSLS-VMLAFFPSEKAEVDKFKAVVANRLGARYYPSYRVAEQVGIS 227
Query: 982 PLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVT 1041
LS+ T S ++ S ++ N+GL++KF K+ +V+G++R++ + W ++E+ +
Sbjct: 228 GHALSKITSSFLVLTSD---GQKTNLGLSLKFEAKSLKVLGYSRKN--GRFWEFSEKAIE 282
Query: 1042 LIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIV---SWLKEQPHAKAEVR 1098
LI+ Y FPE+F L + S D I D+F G++ AQ+ +WL ++ E
Sbjct: 283 LIREYKDAFPELFQKLIN-SGDHIARASDIF--TGDKPDAQVREAKTWLSKKGVRDLEAV 339
Query: 1099 PCGAAVVDAKVVSLIEHAVDTCEK------VEKQITLFVKPNKLYIPKPTLDKLCPDPDT 1152
+D + V + D C K ++K I + + P + +L +
Sbjct: 340 SLFCDQLDKECVIQVVELADECTKNKIPGTIKKAIVKGIPRQAILKPSHAVYRLQ---NQ 396
Query: 1153 KFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSES 1210
F L DRVV ++D +VPL +G ++G+ DV +D PF G + RC
Sbjct: 397 TFSLGDRVVMVKDSGSVPLAVKGIVVGL------NAKSLDVAWDVPFMSGTTLGGRCPLY 450
Query: 1211 RGYRMPAQAMINLSYGERLCGNSNPHVKNINVMQSRGERNTNYAQVTRQPQ 1261
RG + +NL+ ++ ++NP N ++ ++ Y Q QP+
Sbjct: 451 RGSTVEFNTCLNLTR-QQFIVSTNP-----NAHAAQQQKPAFYQQRGEQPR 495
>gi|323456482|gb|EGB12349.1| hypothetical protein AURANDRAFT_20690, partial [Aureococcus
anophagefferens]
Length = 186
Score = 120 bits (302), Expect = 5e-24, Method: Composition-based stats.
Identities = 67/172 (38%), Positives = 95/172 (55%), Gaps = 18/172 (10%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRF-------RSAKEAEVLEQKAKEKGERLPTEK--R 188
P + A+DGVAPRAKMNQQR RR+ +A + L + G+ P +K +
Sbjct: 18 PTAFVYFALDGVAPRAKMNQQRTRRYVAAQERAEAAAAEDALRDELAATGQPAPEKKAAK 77
Query: 189 FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGE 248
+D N ITPGT FM +L LR + + + WK + +LS PGEGE
Sbjct: 78 WDHNVITPGTEFMRKLADFLRAYCARRARSHPRWKH---------ISFLLSDATVPGEGE 128
Query: 249 HKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
HKI+ Y+R ++ + Y+P +HC+ G DADLIML L HE F +LR+ +K+
Sbjct: 129 HKIISYVRALRQQEGYDPATQHCIVGEDADLIMLSLALHEENFLVLRKRMKW 180
Score = 47.0 bits (110), Expect = 0.12, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
+ + I +++ L +++P + A+DGVAPRAKMNQQR RR+
Sbjct: 1 MLRRIEAHLDRLMELMRPTAFVYFALDGVAPRAKMNQQRTRRY 43
>gi|83317922|ref|XP_731370.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491393|gb|EAA22935.1| very similar to mouse Dhm1 and Dhm2-related [Plasmodium yoelii
yoelii]
Length = 387
Score = 118 bits (296), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 70/293 (23%)
Query: 339 KEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDG 398
KE ++ FSI ++DD V + FL+GNDF+P++P++ I G++ ++ Y +
Sbjct: 165 KEKNII---FSINRVVDDIVFLSFLVGNDFLPHIPNIDINEGSMNEIFNSYIFYIYKYSN 221
Query: 399 YINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDP 458
YI ++++R + L L+ G++F F K E P
Sbjct: 222 YITYKDKVHIERLKIVLKILS---------------------GQEFQ-YFKKRGINENIP 259
Query: 459 DLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDY 518
+ TD+ Y+ YYY F +FG +
Sbjct: 260 EF------TDE------------KKYKSYYY-----------FHKFG----------VSD 280
Query: 519 AKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEM 578
+K ++++ YI + WNLHYY+ GC SW W YP+HYAP SD+ F + +E
Sbjct: 281 SKEIQQIVKK----YIEGLFWNLHYYHFGCASWHWEYPYHYAPLCSDLLSFEKSDFFFEK 336
Query: 579 GEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKK 631
G+P+ + L++VLP K LLP+PY+N+ + + ++P+ D NGKK
Sbjct: 337 GKPYSAYTHLISVLPQKDKNLLPDPYKNVYAED--EVKSFFPDNVKIDPNGKK 387
Score = 46.2 bits (108), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%)
Query: 267 NMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKS 304
N HC+YGLDADLIML L TH +LR++ K S
Sbjct: 10 NWNHCIYGLDADLIMLSLVTHLNNIFILRDKFKLTNDS 47
>gi|339237355|ref|XP_003380232.1| conserved hypothetical protein [Trichinella spiralis]
gi|316976967|gb|EFV60152.1| conserved hypothetical protein [Trichinella spiralis]
Length = 814
Score = 117 bits (294), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/454 (21%), Positives = 196/454 (43%), Gaps = 70/454 (15%)
Query: 782 LGKTIFINYPHLIEIRVQAVATKDSRISF---DKNSGPVFERAAKDMQDAFQLSKKSITD 838
LGK I +++P+ I V+T DS + D N + + + ++ +
Sbjct: 47 LGKRILLSWPYSIIGLCVKVSTLDSNCAILGEDGNCNITYVAHDGNAKIMWKRLANICEE 106
Query: 839 GYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQA 898
Y K G+ + ++L++ + + K+ G + Q +
Sbjct: 107 QYLDKFGIKM-KVKILLHYKLISGWKHVLNNNGNFELIPFWSDKEAETPVQLVLPKFVID 165
Query: 899 RESLEYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDL--SD 956
+ + I++ F+L Y + + + E + ++L +++ P L +
Sbjct: 166 DKYFTERPIEKFAPLASYAFSLHRKCYAA----MCQILEYKTNMRLLVSLRRFPALRFNI 221
Query: 957 LVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRK 1016
+ + ++T+ N+ + + + P L R TGS+ +I ++ ++ NIGLN+K + K
Sbjct: 222 TLDMMEETLANWYSTRELIEMFQLLPSTLGRLTGSL-LIAKNKDLERKVNIGLNLKSNHK 280
Query: 1017 NEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDI--YLRDDVFPH 1074
+ E +G+ R ++ ++W Y+E V LI+ Y+ +FP++ +L+ ++ D + + D++ +
Sbjct: 281 SAEKLGYAMRIDS-RRWIYSEDAVKLIEGYILEFPDIIDYLEMNNCDAVKYLIATDIWEN 339
Query: 1075 QGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPN 1134
+ +W H K + CG
Sbjct: 340 E---------NW----THTKMPLLCCGP-------------------------------- 354
Query: 1135 KLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVV 1194
+ DP+T F+LFDRV+N+R VP G GT+I + G + +V+
Sbjct: 355 -----------IAADPETDFQLFDRVINVRAGCCVPYGMAGTVISLPGGASHPKGNLEVL 403
Query: 1195 FDKPFPHGVKIRCSESRGYRMPAQAMINLSYGER 1228
FD+PF G+ IR S+ +R+P+ A+IN +Y +R
Sbjct: 404 FDRPFVGGMSIRGSKPSAFRLPSYALINFTYSQR 437
>gi|221487913|gb|EEE26145.1| XRN 5'-3' exonuclease N-terminus domain-containing protein, putative
[Toxoplasma gondii GT1]
Length = 2089
Score = 117 bits (292), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 136/331 (41%), Gaps = 51/331 (15%)
Query: 339 KEPGVLSFP-------------FSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLL 385
K PGV+SF E +IDD+V + F +GNDF+P LP L I G L L
Sbjct: 1273 KAPGVVSFSQGEGRRGFADPRLLDPERLIDDFVFLSFFVGNDFLPGLPHLDIFQGGLATL 1332
Query: 386 YKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE-------- 437
+ Y LP L GY+ +NL+R + LA ++ F +++ D L
Sbjct: 1333 VRSYTAALPALGGYLTLKTKINLERLRRLFQILALYEGPHF-QRHLDPGLLRSISRAQAG 1391
Query: 438 ----GKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNY-----------A 482
G G + D+ + K + + P L+ + + + D + Y
Sbjct: 1392 LSGHGAEGTRHDDLVEEAK-RRISPLLSRVSRQPAQEVDCSDPHAVLYYTSKFPLATLLG 1450
Query: 483 NYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLH 542
+ S T+ + + + +A ++ D Y+ + + L
Sbjct: 1451 RGDSRAKSGASPACPTSPSAAPLVPSLARGPWAVPFANFRAQLALD----YVTGLFFLLR 1506
Query: 543 YYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEP-------FLPFQQLLAVLPAA 595
YY+ WSW++PH +AP SD+ L + P F P+ QLLAVLPA+
Sbjct: 1507 YYHTSKPCWSWFFPHEFAPLCSDLARLDPQALARAVALPSLREDFMFSPYAQLLAVLPAS 1566
Query: 596 SKELLPEPYQNLMTLENSPILEYYPEEFATD 626
S LLP Y++L + + + +P+ F D
Sbjct: 1567 SAALLPRIYRHLPQTRD--VADMFPDTFPVD 1595
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 189 FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGE 248
D+NCI+PGT FM Q L+ F+ K+ T LW++ CV L+ H PGEGE
Sbjct: 811 LDTNCISPGTTFMTLCEQTLKKFIVHKLRTSPLWRNL--------QCVCLNTHSVPGEGE 862
Query: 249 HKIMDYIRYMK 259
HK++ +R+ K
Sbjct: 863 HKLLHLLRFGK 873
Score = 57.4 bits (137), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 29 FDNLYLDMNGIIHNCSH---PNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAI 85
D L+LD N IIH CSH P+ P + + Q + Y+ L +++P+KL + +
Sbjct: 654 IDALFLDFNAIIHLCSHGHLPSTLPPPLMHCQPLLLQRVCAYLHRLVSLVRPRKLLVLTL 713
Query: 86 DGVAPRAKMNQQR 98
DGV P AK+NQQR
Sbjct: 714 DGVPPLAKVNQQR 726
>gi|237831033|ref|XP_002364814.1| XRN 5'-3' exonuclease N-terminus domain-containing protein
[Toxoplasma gondii ME49]
gi|211962478|gb|EEA97673.1| XRN 5'-3' exonuclease N-terminus domain-containing protein
[Toxoplasma gondii ME49]
gi|221507695|gb|EEE33299.1| hypothetical protein TGVEG_101580 [Toxoplasma gondii VEG]
Length = 2089
Score = 116 bits (291), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 136/331 (41%), Gaps = 51/331 (15%)
Query: 339 KEPGVLSFP-------------FSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLL 385
K PGV+SF E +IDD+V + F +GNDF+P LP L I G L L
Sbjct: 1274 KAPGVVSFSQGEGRRGFADPRLLDPERLIDDFVFLSFFVGNDFLPGLPHLDIFQGGLATL 1333
Query: 386 YKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE-------- 437
+ Y LP L GY+ +NL+R + LA ++ F +++ D L
Sbjct: 1334 VRSYTAALPALGGYLTLKTKINLERLRRLFQILALYEGPHF-QRHLDPGLLRSISRAQAG 1392
Query: 438 ----GKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNY-----------A 482
G G + D+ + K + + P L+ + + + D + Y
Sbjct: 1393 LSGHGADGTRHDDLVEEAK-RRISPLLSRVSRQPAQEVDCSDPHAVLYYTSKFPLATLLG 1451
Query: 483 NYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLH 542
+ S T+ + + + +A ++ D Y+ + + L
Sbjct: 1452 RGDSRAKSGASPACPTSPSAAPLVPSLARGPWAVPFANFRAQLALD----YVTGLFFLLR 1507
Query: 543 YYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEP-------FLPFQQLLAVLPAA 595
YY+ WSW++PH +AP SD+ L + P F P+ QLLAVLPA+
Sbjct: 1508 YYHTSKPCWSWFFPHEFAPLCSDLARLDPQALARAVALPSLREDFMFSPYAQLLAVLPAS 1567
Query: 596 SKELLPEPYQNLMTLENSPILEYYPEEFATD 626
S LLP Y++L + + + +P+ F D
Sbjct: 1568 SAALLPRIYRHLPQTRD--VADMFPDTFPVD 1596
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 189 FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGE 248
D+NCI+PGT FM Q L+ F+ K+ T LW++ CV L+ H PGEGE
Sbjct: 812 LDTNCISPGTTFMTLCEQTLKKFIVHKLRTSPLWRNL--------QCVCLNTHSVPGEGE 863
Query: 249 HKIMDYIRYMK 259
HK++ +R+ K
Sbjct: 864 HKLLHLLRFGK 874
Score = 57.0 bits (136), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 29 FDNLYLDMNGIIHNCSH---PNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAI 85
D L+LD N IIH CSH P+ P + + Q + Y+ L +++P+KL + +
Sbjct: 655 IDALFLDFNAIIHLCSHGHLPSTLPPPLMHCQPLLLQRVCAYLHRLVSLVRPRKLLVLTL 714
Query: 86 DGVAPRAKMNQQR 98
DGV P AK+NQQR
Sbjct: 715 DGVPPLAKVNQQR 727
>gi|66804489|ref|XP_635977.1| hypothetical protein DDB_G0289921 [Dictyostelium discoideum AX4]
gi|60464324|gb|EAL62473.1| hypothetical protein DDB_G0289921 [Dictyostelium discoideum AX4]
Length = 1235
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 163/377 (43%), Gaps = 71/377 (18%)
Query: 319 FFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHII 378
F +++ R YLE F + E + +I+D+ ++ F +GNDF+P+LP + I
Sbjct: 616 FDYVNIDSFRTYLEYYFFEKIEKSKRE-KINFNRVINDFTVLCFYLGNDFLPHLPSVGIQ 674
Query: 379 NGALPLLYKVYQEVLPT-LDG------YINE-GGYLNLKRFEKFLTKLASFDFEQFREKY 430
+G++ L+ Y+E + L+G +NE +LN + L LA ++ + E
Sbjct: 675 SGSIELIMCWYREWIQNCLNGDDDIKYIVNEQSTHLNFENCLPLLESLADWESSLYPEN- 733
Query: 431 ADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYS 490
LE ++ K F V S E + ++ + YDD
Sbjct: 734 -----LEKQVKKDFIKVNKNSTSNESS---SIVMVPPEFKYDDLL--------------- 770
Query: 491 DEDEEWRTNFFSEFGQHKTDYYHYKLDYA----KVTNEVLRDQAECYIRAIQWNLHYYYN 546
YY K D +++ D Y + W L YY +
Sbjct: 771 --------------------YYRVKFDLIGKPDDQVKKLVDDMCYQYTLGLHWVLRYYVS 810
Query: 547 GCVSWSWYYPHHYAPY----------ISDIKDFSHLN--LKYEMGEPFLPFQQLLAVLPA 594
GC +W WYYP+HYAP +S I+D +N +++ P P L +VLP
Sbjct: 811 GCQAWDWYYPYHYAPLAKDLLNYQKRLSKIQDREMVNNQFNFKLSSPLPPLIHLASVLPR 870
Query: 595 ASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIK-AMD 653
S LP+ ++++ ENSP Y +++ D NG+ W+A+VL+ F+D K + +
Sbjct: 871 NSVAFLPDSMKHIVN-ENSPFTASYRDDYKYDFNGENVAWKAIVLLDFMDIEKFKEYLLP 929
Query: 654 AVEHLLTDEERSRNRHG 670
V + LTD E+ RN G
Sbjct: 930 IVNNELTDNEKKRNLIG 946
Score = 111 bits (277), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 98/172 (56%), Gaps = 23/172 (13%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE-AEVLEQKAKEKGERLPTEK-------RF 189
P L ++ +DGV PRAK +QR RRF+S+KE +V+ ++ K K + + + F
Sbjct: 106 PSSLLYIGVDGVPPRAKAIEQRKRRFKSSKETVDVIIKQLKSKSKPITRDSIIEQFSLIF 165
Query: 190 DSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEH 249
DSN I+P T F+ ++ ++ + K LSL +++ +ILS PGEGEH
Sbjct: 166 DSNSISPATEFIEKVDDWIKDYCK-----------QLSL-KRQNLSIILSDSTVPGEGEH 213
Query: 250 KIMDYIRYMKSKPDYNPN-MRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
KIMDYIR ++ P + M HC YG+DADLI LGL +H F +LR+ +
Sbjct: 214 KIMDYIR--QNHPILKKDGMSHCFYGMDADLIFLGLESHLSNFYILRDPISL 263
Score = 73.6 bits (179), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 86/166 (51%), Gaps = 32/166 (19%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNC----------------- 43
MG+P F+R++ E +P + E +I +F+NLY+DMNG++HN
Sbjct: 1 MGIPSFYRWLIENFPKVLENNLNGEI-KFNNLYIDMNGVVHNAIKLDHSPTSSSSSSSTT 59
Query: 44 ---------SHPNDNDPHF----RITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAP 90
++ D + ++++++ + IF+ ++ + + P L ++ +DGV P
Sbjct: 60 TTPPTTPTTTYSKDKEVVLMLKSELSDEKLKERIFYRLDQMVNNVNPSSLLYIGVDGVPP 119
Query: 91 RAKMNQQRGRRFRSAKE-AEVLEQKAKEKGERLPTEKRFDFITLKF 135
RAK +QR RRF+S+KE +V+ ++ K K + + + + +L F
Sbjct: 120 RAKAIEQRKRRFKSSKETVDVIIKQLKSKSKPITRDSIIEQFSLIF 165
>gi|170105467|ref|XP_001883946.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641126|gb|EDR05388.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 112
Score = 115 bits (287), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 72/112 (64%), Gaps = 16/112 (14%)
Query: 1 MGVPKFFRYISE---------------RYPCLSEVVREYQIPEF-DNLYLDMNGIIHNCS 44
MG+PKFFRY+SE + ++ R Y + DNLYLD NGIIHNCS
Sbjct: 1 MGIPKFFRYVSEIPIDLAVDTREQHSRVWWVAYDLERAYPMTLLSDNLYLDFNGIIHNCS 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQ 96
PND D HFR+TE+Q IF Y++ LF I+ KKLFFMA+DGVAPRAKMNQ
Sbjct: 61 RPNDEDAHFRLTEEQNNTSIFTYVDRLFGKIKLKKLFFMAVDGVAPRAKMNQ 112
Score = 42.7 bits (99), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/19 (94%), Positives = 19/19 (100%)
Query: 139 KKLFFMAIDGVAPRAKMNQ 157
KKLFFMA+DGVAPRAKMNQ
Sbjct: 94 KKLFFMAVDGVAPRAKMNQ 112
>gi|118373913|ref|XP_001020149.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila]
gi|89301916|gb|EAR99904.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 874
Score = 114 bits (286), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 209/452 (46%), Gaps = 66/452 (14%)
Query: 1 MGVPKFFRYISERYPC-LSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MGVP +F +I +YP + +V R + D LY+D+NGI + + +++ ++ + K
Sbjct: 1 MGVPGYFSWIHRKYPYQVRKVRRNGRKKHIDCLYIDVNGICYQYAR-DEHQYNYLLKPKS 59
Query: 60 ---IFQDIFHYIEILFRMIQPK-KLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA 115
IF+ + +I+ + +++P+ +++ M + P S E+ +
Sbjct: 60 LETIFKQVIDHIDSIIELVEPQLQVYLMLANPFQPNL-----------SGFESYFCMMRF 108
Query: 116 KEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQK 175
K+ +L K F ++ KK DG PRAKMNQQR RRF + L+ +
Sbjct: 109 KKNQFQL---KLFAIFYIQKIILKK------DGPCPRAKMNQQRQRRFHAEMHHLTLKDE 159
Query: 176 AKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKIT------TDKLWKDTLSLW 229
K+ G + E+ +N I PGTPFM L++QLR +++ +I TD
Sbjct: 160 LKKHGFDV-KEETVPNNSIAPGTPFMYELNEQLRRYIETRIALSNKAMTDGEADHKEHQV 218
Query: 230 VWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEP 289
+K + ILS PGEGEHKI++ + HC+ G DADL++L L T
Sbjct: 219 SYKKLQFILSDSNAPGEGEHKILE--------------LTHCIVGADADLLLLSLATIGK 264
Query: 290 YFSLLREEVKF------------NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGK 337
+LRE KF K Q+ +E ++ L+ ++ ++ + ++ K
Sbjct: 265 RILILRENSKFKGDKTDLEKELQKLKEELSHPQLDLHKEREYDLVDINGLKRVILDKYKK 324
Query: 338 L-KEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIIN------GALPLLYKVYQ 390
+ V + ++ +++DD+V + GNDF+P + I + L L + Y
Sbjct: 325 MFDNKQVQNLKYNPMSLMDDFVFLSLFAGNDFLPRQNYMQIKSEKGHKPNILDKLIEKYD 384
Query: 391 EVLPTLDGYINEGGYLNLKRFEKFLTKLASFD 422
L T Y+++ G++ + +F ++A+ +
Sbjct: 385 SYLETATSYLSDRGFIKYNQIIEFFKQVATIE 416
Score = 74.3 bits (181), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 90/180 (50%), Gaps = 16/180 (8%)
Query: 533 YIRAIQWNLHYYYNGC--VSWSWYYPHHYAPYISDIKDFSHLNLKYEMG----EPFLPFQ 586
Y+ ++ L YY+ G SW+++YPH+YAP D+ +F N K+E+ +PF P++
Sbjct: 585 YLEGFEFTLLYYFRGIEKASWNYFYPHYYAPLTQDVVEFLERNPKFEVKFVKTQPFQPYK 644
Query: 587 QLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEV 646
QLLA+L ++ LLP ++ L P + P+ D G + ++ +PFID
Sbjct: 645 QLLAILHPDNEALLPAEFKGLFKKYLQP---FCPQILDIDKYGATMEHMQIIKLPFIDVN 701
Query: 647 KLIKAMD----AVEHLLTDEERSRNRHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEK 702
L +A A+E + +++RN ++ Y +L +++ F + + +EK
Sbjct: 702 VLEQAYQEGEKALEKSKNEYDKNRNIRSQDFIFEY---DLNSSINIPVFNKLVHHQIIEK 758
>gi|170043136|ref|XP_001849255.1| 5'-3' exoribonuclease [Culex quinquefasciatus]
gi|167866569|gb|EDS29952.1| 5'-3' exoribonuclease [Culex quinquefasciatus]
Length = 340
Score = 114 bits (285), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 139/280 (49%), Gaps = 16/280 (5%)
Query: 745 IENAKVKVFQQPSRNESIIIVQDK-VQVPSLKQVADQILGKTIFINYPHLIEIRVQAVAT 803
++ +VKVF PSRN S+++ DK S Q+A ++LG +++++PHL E +V VA
Sbjct: 47 LKEIRVKVFNFPSRNASMVVAIDKEGDDKSTAQLAQELLGSIVYVSWPHLTEAKVVKVAD 106
Query: 804 KDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESR 863
+ D+ P E+ F K+I + + +L +D+G LV+ +
Sbjct: 107 AKTVYEKDREERPNNEKF-------FGTCVKAIVEHHSNRLAIDLGEIRQLVHVKTCVGS 159
Query: 864 KYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLE-YKTIDEIFYPGCQCFALSN 922
+Y + + + + Y Q+ V +L++A +L+ Y+ + E+F C F +
Sbjct: 160 EYVLKD-DRYVLNKLWNQGETMYPVQAIVTDLREALRTLKPYQEVQEMFPENCVVFLRAT 218
Query: 923 PHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISP 982
YGS G V+ V + IK F++ +EP+L ++ + D+ +YL +Y AS + IS
Sbjct: 219 QWYGSMGHVVD-VTAGHKRIKTRFEIYEEPNLDTVLKIDDEARSHYLTTYDAASSIGISA 277
Query: 983 LLLSRFTGSIFIIDSTEEGAK-----RHNIGLNIKFSRKN 1017
LLSR + +I+++ + NIGL + + R+
Sbjct: 278 NLLSRLSSTIYMVTGGRRSLNVDEKGKMNIGLQLSWCRRT 317
>gi|322511261|gb|ADX06572.1| putative XRN family 5'-3' exonuclease [Organic Lake phycodnavirus]
Length = 467
Score = 113 bits (283), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 191/473 (40%), Gaps = 137/473 (28%)
Query: 144 MAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCR 203
+ DGVAP AKM QQ+ RR++S ++L Q + F++NCITPGT FM
Sbjct: 68 ICFDGVAPLAKMVQQKQRRYKSHLTKKILNQSSS-----------FNTNCITPGTLFMNG 116
Query: 204 LHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPD 263
L+ L+ +KL DT ++LSG + PGEGE+KI +IR K+ +
Sbjct: 117 LNVYLK---------EKLDNDT---------TIVLSGSDEPGEGEYKIFQHIRTCKNNQE 158
Query: 264 YNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFF--L 321
H +YGLDADLIML L + QI ETK+F L
Sbjct: 159 -----NHIIYGLDADLIMLSLL--------------------QLPKQIYLYRETKYFKYL 193
Query: 322 LHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGA 381
++ +DYL L+ L E S SIEN + + F GNDF+P+ P ++I N
Sbjct: 194 NYIQENQDYL-LDVSLLGEQICQS--MSIEN----YCFLCFFCGNDFLPHFPSINIRNHG 246
Query: 382 LPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQF--REKYADIQYLEGK 439
+D + LNL + K + FE+ +E Q ++ K
Sbjct: 247 --------------IDHLLEHALSLNLIQNHKIVWSELYILFERLSKQEHERIAQQIQWK 292
Query: 440 MGKKFSDVFHKEKSKEM---DPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEW 496
+K ++ H+++ + D D +KA D Y+
Sbjct: 293 TTRKAHNITHEDRLNYLPLYDHDEEDYLKAHPDKYN------------------------ 328
Query: 497 RTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAEC--YIRAIQWNLHYYYNGCVSWSWY 554
F QH DQ+ C Y+ ++W YY + Y
Sbjct: 329 ----MILFRQH-------------------NDQSICKQYLEMLEWTWDYYIGNPIDLYKY 365
Query: 555 YPHHYAPYISDIKDFSHLNLKYEMGEP-----FL-PFQQLLAVLPAASKELLP 601
YP YAP + + ++ + P F+ P QLL VLP + +L+P
Sbjct: 366 YPMGYAPLFQSLLNEISIDDDERLLSPNKNTTFVNPITQLLYVLPYENYDLIP 418
Score = 56.2 bits (134), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 15/115 (13%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+P +F YI + + + + R + I DNLYLD N II++ D +P
Sbjct: 1 MGIPSYFSYILKHHKHI--LKRHFIIC--DNLYLDANSIIYDQIQKGD-EP--------- 46
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKA 115
++ I+ I + QPK+ + DGVAP AKM QQ+ RR++S ++L Q +
Sbjct: 47 YEHIYQAIMTIINKFQPKQTR-ICFDGVAPLAKMVQQKQRRYKSHLTKKILNQSS 100
>gi|70933012|ref|XP_737941.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56513750|emb|CAH81056.1| hypothetical protein PC000391.04.0 [Plasmodium chabaudi chabaudi]
Length = 314
Score = 113 bits (283), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 75/117 (64%), Gaps = 9/117 (7%)
Query: 189 FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGE 248
+DSN ITPGT FM L L+YF++ KIT D+ WK + VI S GEGE
Sbjct: 6 WDSNIITPGTQFMHELSIALKYFIEHKITNDE---------KWKKIVVIFSDANVCGEGE 56
Query: 249 HKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN 305
HKI ++I+ +++ Y+PN RH ++G+DADLIML L +HEPYF +LRE + + K +
Sbjct: 57 HKIYNFIKSQRAQKGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIINLDQKED 113
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 66/110 (60%), Gaps = 7/110 (6%)
Query: 321 LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIING 380
+L L+++R+YL +F +++E IDD++ + FL GNDF+P+LP + I +G
Sbjct: 188 ILDLTILREYLYKDF-------FFDTKYNLERCIDDFIFICFLCGNDFLPHLPSISIASG 240
Query: 381 ALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKY 430
++ L +YQ+VLP L Y+ G +N + F K+++ +A + E F +Y
Sbjct: 241 SIDQLILLYQKVLPVLGDYLINEGSMNFQAFTKYISFIAEVERETFVSQY 290
>gi|258597213|ref|XP_001347750.2| exonuclease, putative [Plasmodium falciparum 3D7]
gi|254832599|gb|AAN35663.2| exonuclease, putative [Plasmodium falciparum 3D7]
Length = 734
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVL 592
YI + WNLHYY+ GC SW W YP+HYAP SD+ F + +E G+P+ F L++VL
Sbjct: 592 YIEGLFWNLHYYHFGCASWYWEYPYHYAPLCSDLLSFEKSDFFFEKGKPYSAFTHLISVL 651
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFID 644
P K LLP+ Y+N+ + ++PE D NGKK+ WE +V +PFI+
Sbjct: 652 PQKDKNLLPDAYKNIYV--EDEVKSFFPENVKIDPNGKKETWEYIVHLPFIN 701
Score = 111 bits (277), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 85/162 (52%), Gaps = 21/162 (12%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PKKL ++ +DGV+P+AKMNQQR RRF S + + T F+ NCIT G
Sbjct: 121 PKKLIYIGVDGVSPKAKMNQQRKRRFLSIFKI----------NDNDNTSNLFNPNCITTG 170
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +++ L + K+ D VI SG + GEGEHKI+ YIR
Sbjct: 171 TDFMYKINLSLNKWFKILKKKKVFEFD-----------VIFSGSDVAGEGEHKILKYIRE 219
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVK 299
+ N HC+YGLDADLIML L TH +LR++ K
Sbjct: 220 NCKRDSNFKNYNHCIYGLDADLIMLSLVTHLNNIFILRDKFK 261
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 72/105 (68%), Gaps = 4/105 (3%)
Query: 2 GVPKFFRYISERYPCL-SEVVREYQIPEFDNLYLDMNGIIHNCSHPN-DNDPHFRITEKQ 59
G+P+ +++++ YP + E++ + D Y+DMNG+IH+C+H N + P + E +
Sbjct: 46 GIPRMYKWLTSYYPTVREELINNEKQKSVDIFYIDMNGVIHHCTHANKEKLPIY--DEHE 103
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
+F +I Y++ LF +I+PKKL ++ +DGV+P+AKMNQQR RRF S
Sbjct: 104 LFSNILQYLKNLFYLIKPKKLIYIGVDGVSPKAKMNQQRKRRFLS 148
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%)
Query: 348 FSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLN 407
FSI ++DD V + FL+GNDF+P++P++ I G++ + Y + YI ++
Sbjct: 472 FSISRVVDDIVFLSFLVGNDFLPHIPNIDINEGSMNEILNSYIFYIYKYSNYITYKDKVH 531
Query: 408 LKRFEKFLTKLASFDFEQFREK 429
++R + L L++ +FE F+++
Sbjct: 532 IERLKIILKILSAQEFEYFKKR 553
>gi|221055850|ref|XP_002259063.1| 5'-3' exoribonuclease [Plasmodium knowlesi strain H]
gi|193809134|emb|CAQ39836.1| 5'-3' exoribonuclease, putative [Plasmodium knowlesi strain H]
Length = 648
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVL 592
YI + WNLHYY+ GC SW W YP+HYAP SD+ F + +E G+P+ + L++VL
Sbjct: 516 YIEGLFWNLHYYHFGCASWCWEYPYHYAPLCSDLLSFEKSDFFFEKGKPYSAYTHLISVL 575
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFID 644
P LLPE Y+N+ + + ++PE D NGKK+ WE +V +PFI+
Sbjct: 576 PQKDNNLLPEAYKNIYS--EDEVKSFFPENVRIDPNGKKETWEYIVHLPFIN 625
Score = 110 bits (274), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 89/167 (53%), Gaps = 21/167 (12%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+KL ++ +DGV+P+AKMNQQR RRF S + + G L F+ NCIT G
Sbjct: 137 PRKLVYVGVDGVSPKAKMNQQRKRRFLS-----LFKVSDNSNGTNL-----FNPNCITTG 186
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +++ L + ++ + D VI SG + PGEGEHKI+ +IR
Sbjct: 187 TDFMYKINLSLNKWFQILKKKEIFPFD-----------VIFSGSDVPGEGEHKILKFIRE 235
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKS 304
+ N HC+YGLDADLIML L TH +LR++ K S
Sbjct: 236 NCKRDVAFRNYSHCIYGLDADLIMLSLVTHLNNIFILRDKYKMTNDS 282
Score = 90.1 bits (222), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Query: 1 MGVPKFFRYISERYPCL-SEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
G+P+ +++++ YP + E++ E D Y+DMNG+IH+C+H N E +
Sbjct: 61 FGIPRMYKWLTSYYPTVREELMTNDGQKEVDIFYVDMNGVIHHCTHANKETLPVH-DEHE 119
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
+ +I Y++ LF +++P+KL ++ +DGV+P+AKMNQQR RRF S
Sbjct: 120 LLSNILKYLKNLFHLVKPRKLVYVGVDGVSPKAKMNQQRKRRFLS 164
Score = 43.5 bits (101), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 339 KEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDG 398
KE V+ F+I ++DD V + FL+GNDF+P +P + I G++ + Y + +
Sbjct: 390 KEKNVI---FNISRVVDDIVFLSFLVGNDFLPQIPHIDINEGSMNEILNAYIYYIYRYNN 446
Query: 399 YINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDP 458
YI ++++R + L L++ +F F ++ + LE +++ ++ +K DP
Sbjct: 447 YITLKDKVHIQRLKIILKILSAQEFSYFLKRGNEENILEFTDERRYKSYYYLQKFGVEDP 506
>gi|219125787|ref|XP_002183154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405429|gb|EEC45372.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 151
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 86/145 (59%), Gaps = 35/145 (24%)
Query: 1 MGVPKFFRYISERYPCL---------SEVVREY-------------------QIPEFDNL 32
MGVPKFFR++SERYP + +E +E+ PE D L
Sbjct: 1 MGVPKFFRWLSERYPKVIQRHGCPPNAETTQEHFGTDPPANMPKPDPLSTCGLAPEIDRL 60
Query: 33 YLDMNGIIHNCSH------PNDNDPHFRITEKQIFQDIFHYIEILFRMI-QPKKLFFMAI 85
Y+DMNGIIH CSH N + I+E +IF++I +Y++ + + I +PK+L +MAI
Sbjct: 61 YIDMNGIIHGCSHNNSEAEENGEEGVANISEDEIFRNICYYLDRVVKDIAKPKQLVYMAI 120
Query: 86 DGVAPRAKMNQQRGRRFRSAKEAEV 110
DGVAPRAK+NQQR RR+RS KE E+
Sbjct: 121 DGVAPRAKLNQQRSRRYRSGKEGEI 145
>gi|355729455|gb|AES09873.1| 5'-3' exoribonuclease 1 [Mustela putorius furo]
Length = 74
Score = 112 bits (281), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/83 (61%), Positives = 63/83 (75%), Gaps = 9/83 (10%)
Query: 204 LHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPD 263
LH+ L+YFV +KI+TDK W+ V + SGHETPGEGEHKIM++IR K+KPD
Sbjct: 1 LHEHLKYFVNMKISTDK---------SWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPD 51
Query: 264 YNPNMRHCLYGLDADLIMLGLCT 286
++PN RHCLYGLDADLIMLGL +
Sbjct: 52 HDPNTRHCLYGLDADLIMLGLTS 74
>gi|156098318|ref|XP_001615191.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804065|gb|EDL45464.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 587
Score = 112 bits (280), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVL 592
YI + WNLHYY+ GC SW W YP+HYAP SD+ F + +E G+P+ + L++VL
Sbjct: 455 YIEGLFWNLHYYHFGCASWCWEYPYHYAPLCSDLLSFEKSDFFFEKGKPYSAYTHLISVL 514
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFID 644
P LLPE Y+N+ + + ++PE D NGKK+ WE +V +PFI+
Sbjct: 515 PQKDNNLLPEAYKNIYS--EDEVKSFFPENVRIDPNGKKETWEYIVHLPFIN 564
Score = 109 bits (273), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 99/205 (48%), Gaps = 30/205 (14%)
Query: 110 VLEQKAKEKGERLPTEKRFDFIT-----LKFCF----PKKLFFMAIDGVAPRAKMNQQRG 160
V+ E LP + +T LK F P+KL ++ +DGV+P+AKMNQQR
Sbjct: 35 VIHHCTHANKETLPVHDEHELLTNILKYLKNLFHLVKPRKLVYVGVDGVSPKAKMNQQRK 94
Query: 161 RRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDK 220
RRF S + + + F+ NCIT GT FM +++ L + ++
Sbjct: 95 RRFLSLFKV----------SDNSNSAHLFNPNCITTGTDFMYKINLALNKWFQILKKKGI 144
Query: 221 LWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
D VI SG + PGEGEHKI+ +IR + N HC+YGLDADLI
Sbjct: 145 FPFD-----------VIFSGSDVPGEGEHKILKFIREHCKRDGAFRNYSHCIYGLDADLI 193
Query: 281 MLGLCTHEPYFSLLREEVKFNTKSN 305
ML L TH +LR++ K S+
Sbjct: 194 MLSLVTHLNSIFILRDKYKMANDSH 218
Score = 82.8 bits (203), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 7 FRYISERYPCLSE--VVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDI 64
+++++ YP + E + E Q + D Y+DMNG+IH+C+H N E ++ +I
Sbjct: 2 YKWLTSYYPTVREELITNEGQ-KDVDIFYVDMNGVIHHCTHANKETLPVH-DEHELLTNI 59
Query: 65 FHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
Y++ LF +++P+KL ++ +DGV+P+AKMNQQR RRF S
Sbjct: 60 LKYLKNLFHLVKPRKLVYVGVDGVSPKAKMNQQRKRRFLS 99
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 15/178 (8%)
Query: 348 FSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLN 407
F+I ++DD V + FL+GNDF+P++P++ I G++ + Y + YI ++
Sbjct: 335 FNISRVVDDIVFLSFLVGNDFLPHIPNVDINEGSMNEILNAYIFYIYKYGNYITLKDKVH 394
Query: 408 LKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKAT 467
++R + L L++ +F F ++ D E + + ++ +K DP LI
Sbjct: 395 IQRLKIILKILSAQEFSYFLKRGNDENVREFTDERTYKGYYYLQKFGVEDPQQIQLIV-- 452
Query: 468 DDDYDDGTEEVLNYANYE------EYYY------SDEDEEWRTNFFSEFGQHKTDYYH 513
+ Y +G L+Y ++ EY Y SD +++FF E G+ + Y H
Sbjct: 453 -NKYIEGLFWNLHYYHFGCASWCWEYPYHYAPLCSDLLSFEKSDFFFEKGKPYSAYTH 509
>gi|449542916|gb|EMD33893.1| hypothetical protein CERSUDRAFT_55746 [Ceriporiopsis subvermispora B]
Length = 516
Score = 112 bits (280), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 161/345 (46%), Gaps = 29/345 (8%)
Query: 903 EYKTIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPD--LSDLVHL 960
E + E F G + F L YG + T + S I F ++ + +V
Sbjct: 4 EAPPLSEEFPDGTKVFFLGEHAYGVAAQIAGTTESTLSIILAFFPSEKAENDKFKSIVEK 63
Query: 961 QDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEV 1020
+ T Y PS+ VA L +S LS+ T S ++ S ++ + N+GL++KF K +V
Sbjct: 64 RRST--QYFPSFRVAQILGMSGKALSKITSSFMVVTSNDQ---KINLGLSLKFEAKGLKV 118
Query: 1021 VGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQ-GEQR 1079
+ ++R+D + W ++E+ V LI+ Y +++PEV L D S D + +VFP + + +
Sbjct: 119 IDYSRKD--GRYWEFSEKAVDLIREYKEKYPEVMRTL-DRSGDAMIKASNVFPGEDADTK 175
Query: 1080 VAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEK------VEKQITLFVKP 1133
++ SWL ++ E + V IE DT ++K + +
Sbjct: 176 AKEVRSWLMQKGIRDFEPVSLFCDQLKKDTVKEIEQLADTVAANKSPAAIKKAMVKNIPR 235
Query: 1134 NKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDV 1193
+ P + +L + F L DRV I+D VPL ++G +IG+ + +M DV
Sbjct: 236 QAVLKPSHAIYRLQ---NQHFALGDRVTMIQDSGAVPLSFKGVVIGM-----NAKSM-DV 286
Query: 1194 VFDKPFPHGVKI--RCSESRGYRMPAQAMINLSYGERLCGNSNPH 1236
V+D PF G + RCS+ RG + + +NL+ + ++NP
Sbjct: 287 VWDAPFMAGTTLGDRCSQYRGATVEFTSCLNLT-NPQFIASTNPQ 330
>gi|351706558|gb|EHB09477.1| 5'-3' exoribonuclease 2 [Heterocephalus glaber]
Length = 176
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 104/229 (45%), Gaps = 72/229 (31%)
Query: 1 MGVPKFFRYISERY-----PCLSEV---VREYQIP-----------EFDNLYLDMNGIIH 41
MGVP FF ++S +Y C+ E +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPAFFCWLSSKYLSIIVNCVEEKPPKCNGIKIPVDASKPNPNDVEFDKLYLDMNGIIH 60
Query: 42 NCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRR 101
C+HP D + E+++ IF Y++ LF +++ ++L +MAIDGVAPRAKMNQQ RR
Sbjct: 61 PCTHPEDKPTSKK--EEEMMVAIFEYLDGLFNIVRARRLLYMAIDGVAPRAKMNQQLSRR 118
Query: 102 FRSAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGR 161
FR++KE A M +Q R
Sbjct: 119 FRASKEGM------------------------------------------EAAMEKQHVR 136
Query: 162 RFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPGTPFMCRLHQQLRY 210
AK + ++ KE RFDS C TPGT FM L + L Y
Sbjct: 137 EETLAKGGYLPPEQIKE---------RFDSYCTTPGTEFMDNLAKSLCY 176
>gi|389600932|ref|XP_001563893.2| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504577|emb|CAM37939.2| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1108
Score = 111 bits (278), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 150/335 (44%), Gaps = 83/335 (24%)
Query: 353 IIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY-QEVLPTLDGYINEGGYLNLKRF 411
I+DD++++G L+GNDF+P+LP ++ A+ L VY + VLP GYL +
Sbjct: 521 IVDDFIVLGMLLGNDFLPHLPSVYCGESAMDTLMDVYTRAVLPY--------GYLTGVKC 572
Query: 412 EKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDY 471
E L +L E+ YA + E ++F+ +S M P AA
Sbjct: 573 EIQLAQL-----ERLLRAYAAV---EAVRFRQFAI-----QSGTMTPQEAA--------- 610
Query: 472 DDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRD--- 528
T E+ + A++ WR D Y V LRD
Sbjct: 611 ---TPELCSAADHRC---------WR------------DVY--------VRTTSLRDEAG 638
Query: 529 -QAEC--YIRAIQWNLHYYYNGC--VSWSWYYPHHYAPYISDIKDF----------SHLN 573
QA C Y+ +Q+ YY + V+W+WYYP ++AP DI DF +
Sbjct: 639 TQAACRSYVEGLQFVWRYYSSVSLQVNWAWYYPFYHAPLALDIADFLRAQGPQVQTTLAA 698
Query: 574 LKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK-KQ 632
L+ E G+P PF QLL +LP S++L+PE + MT + +++ +P + D G +
Sbjct: 699 LELE-GQPPSPFCQLLCILPPPSRQLVPEALRAAMTSPPAELVDTFPHRWVVDRTGAYGK 757
Query: 633 DWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
D A VL+PF + L + A + T EE+ RN
Sbjct: 758 DHLAAVLLPFANLPPLQGLVAAASGIYTAEEKQRN 792
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 68/106 (64%), Gaps = 5/106 (4%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEKQ 59
MGVPKF ++ ++YP +V + LY+D+NG+IH C H N++DP + TE+
Sbjct: 1 MGVPKFAAWLRKKYP---SMVMARCPGDVHGLYIDLNGLIHPCCH-NEHDPSVALRTEEG 56
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSA 105
+ I IE L ++P+ L ++AIDGVAPRAKMNQQR RR+ SA
Sbjct: 57 KLRSICLAIETLVVTVRPQHLLYIAIDGVAPRAKMNQQRLRRYMSA 102
Score = 79.0 bits (193), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 21/151 (13%)
Query: 167 KEAEVLEQKAKEKGERLPTE----KRFDSNCITPGTPFMCRLHQQLRYFVKLKIT----- 217
E E + + R PT RFDSNCI+PGT FM + +R ++ K+
Sbjct: 191 SEGEGAACGSAAQAGRQPTACAPPARFDSNCISPGTVFMDAVAAAVRDYIHRKLAPKAND 250
Query: 218 ------TDKLWKDTLSLWV------WKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYN 265
+ + S + W + V+ S T GEGEHK++D++R + P +N
Sbjct: 251 GGDSAEVEAGSSPSSSTTINAPCAHWAGLTVVFSDSNTAGEGEHKLVDFLRTQSAFPGFN 310
Query: 266 PNMRHCLYGLDADLIMLGLCTHEPYFSLLRE 296
+ H + GLDADLI L L H P +LR+
Sbjct: 311 GSGCHVIAGLDADLIFLSLSLHIPRVVILRD 341
Score = 48.5 bits (114), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 25/29 (86%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSA 166
P+ L ++AIDGVAPRAKMNQQR RR+ SA
Sbjct: 74 PQHLLYIAIDGVAPRAKMNQQRLRRYMSA 102
>gi|389583613|dbj|GAB66347.1| 5'-3' exoribonuclease [Plasmodium cynomolgi strain B]
Length = 638
Score = 111 bits (277), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 89/170 (52%), Gaps = 21/170 (12%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
PK L ++ +DGV+P+AKMNQQR RRF S + + G L F+ NCIT G
Sbjct: 72 PKNLVYVGVDGVSPKAKMNQQRKRRFLS-----LFKVSDNSNGANL-----FNPNCITTG 121
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +++ L + ++ + D VI SG + PGEGEHKI+ +IR
Sbjct: 122 TDFMYKINLALNKWFQILKKKNIFPFD-----------VIFSGSDVPGEGEHKILKFIRE 170
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKG 307
+ N HC+YGLDADLIML L TH +LR++ K S+
Sbjct: 171 NCKRDAAFRNYNHCIYGLDADLIMLSLVTHLNNIFILRDKYKMTNDSHAA 220
Score = 101 bits (252), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 69/132 (52%), Gaps = 22/132 (16%)
Query: 533 YIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVL 592
YI + WNLHYY+ GC SW W YP+HYAP SD+ F + +E G+P+ + L++VL
Sbjct: 477 YIEGLFWNLHYYHFGCASWCWEYPYHYAPLCSDLLSFEKSDFFFEKGKPYSAYTHLISVL 536
Query: 593 PAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKK--------------------Q 632
P LLPE Y+N+ + + ++PE D NGKK +
Sbjct: 537 PQKDNNLLPEAYKNIYS--EDEVKSFFPENVRIDPNGKKYVLEEGAILTGLPPAQSPIGE 594
Query: 633 DWEAVVLIPFID 644
WE +V +PFI+
Sbjct: 595 TWEYIVHLPFIN 606
Score = 85.1 bits (209), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
Query: 7 FRYISERYPCL-SEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIF 65
+++++ YP + E++ + E D Y+DMNG+IH+C+H N E ++ +I
Sbjct: 2 YKWLTSYYPTVREELINNERQKEVDIFYVDMNGVIHHCTHANKETLPVH-DEHELLSNIL 60
Query: 66 HYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
Y++ LF +++PK L ++ +DGV+P+AKMNQQR RRF S
Sbjct: 61 KYLKNLFHLVKPKNLVYVGVDGVSPKAKMNQQRKRRFLS 99
Score = 43.9 bits (102), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 339 KEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGAL 382
KE V+ F+I ++DD V + FL+GNDF+P++P++ I G++
Sbjct: 351 KEKNVI---FNITRVVDDIVFLSFLVGNDFLPHIPNIDINEGSM 391
>gi|401412103|ref|XP_003885499.1| putative XRN 5'-3' exonuclease N-terminus domain-containing protein
[Neospora caninum Liverpool]
gi|325119918|emb|CBZ55471.1| putative XRN 5'-3' exonuclease N-terminus domain-containing protein
[Neospora caninum Liverpool]
Length = 1754
Score = 110 bits (276), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 130/317 (41%), Gaps = 55/317 (17%)
Query: 351 ENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKR 410
E +IDD+V + F +GNDF+P LP L I G L L + Y LP L GY+ +NL+R
Sbjct: 982 ERLIDDFVFLSFFVGNDFLPGLPHLDIFQGGLATLVRTYTAALPALGGYLTLKTKINLER 1041
Query: 411 FEKFLTKLASFDFEQFREKYADIQYLE-----------GKMGKKFSDVFHKEKSKEMDPD 459
+ LA ++ F E + D L+ G D E + + P
Sbjct: 1042 LRRLFQILALYEGPHF-ESHIDSALLQSIARAQAGLSCGYREDARRDDLLDEAKRRIRPL 1100
Query: 460 LAALIKATDDDYDDGTE-------EVLNY----------------ANYEEYYYSDEDEEW 496
LA +A ++G E VL Y AN + +
Sbjct: 1101 LANAPRAP--PRENGREIDCTDPHAVLYYTSKFPLATLLGRPETRANRDGPSAACPASPS 1158
Query: 497 RTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYP 556
R+ F S + + + +A + D Y+ + + L YY+ WSW++P
Sbjct: 1159 RSLFASNLSRSP-----WAVPFADFRARLALD----YVTGLFFLLRYYHTSKPCWSWFFP 1209
Query: 557 HHYAPYISDIKDFSHLNLKYEMGEP-------FLPFQQLLAVLPAASKELLPEPYQNLMT 609
H +AP SD+ L + P F P+ QLLAVLPA+S LLP Y++L
Sbjct: 1210 HEFAPLCSDLARLDPAALARSVALPSVREDFKFSPYAQLLAVLPASSAALLPRVYRHLPR 1269
Query: 610 LENSPILEYYPEEFATD 626
+ + +P+ F D
Sbjct: 1270 ERE--LADMFPDGFPVD 1284
Score = 53.1 bits (126), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 29 FDNLYLDMNGIIHNCSH---PNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAI 85
D L+LD N IIH CSH P+ P + Q + Y+ L +++P+KL + +
Sbjct: 424 IDALFLDFNAIIHLCSHGHLPSTLPPPLARFLPLLLQRVCGYLHRLVSLVRPRKLLVLTL 483
Query: 86 DGVAPRAKMN 95
DGV P AK+
Sbjct: 484 DGVPPLAKVT 493
>gi|68067452|ref|XP_675691.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56495020|emb|CAH99326.1| hypothetical protein PB000181.03.0 [Plasmodium berghei]
Length = 167
Score = 110 bits (275), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 92/166 (55%), Gaps = 41/166 (24%)
Query: 1 MGVPKFFRYISERYPCLSEVVRE-------------------YQIPE------------- 28
MGVP F++++ RYP +++ V E Y++ +
Sbjct: 1 MGVPTFYKWLVTRYPKIAKAVYETRDNDVYIRRARINENGEFYKVCDLGAYVNNTDENHC 60
Query: 29 -------FDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLF 81
FDN+YLDMNGIIH CSH D + T+++IF +IF YIE LF +I+P+KL
Sbjct: 61 SDNVNGYFDNMYLDMNGIIHLCSH-GDGSKKVK-TDEEIFLNIFLYIERLFDIIEPQKLL 118
Query: 82 FMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKR 127
+MAIDGVAP+AKMNQQR RRF+S +E+ ++ E + +E R
Sbjct: 119 YMAIDGVAPKAKMNQQRSRRFKSILASEIEKRAYIELRNKFLSENR 164
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 122 LPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 181
L E+ FD I P+KL +MAIDGVAP+AKMNQQR RRF+S +E+ ++ E
Sbjct: 103 LYIERLFDIIE-----PQKLLYMAIDGVAPKAKMNQQRSRRFKSILASEIEKRAYIELRN 157
Query: 182 RLPTEKR 188
+ +E R
Sbjct: 158 KFLSENR 164
>gi|260944870|ref|XP_002616733.1| hypothetical protein CLUG_03974 [Clavispora lusitaniae ATCC 42720]
gi|238850382|gb|EEQ39846.1| hypothetical protein CLUG_03974 [Clavispora lusitaniae ATCC 42720]
Length = 483
Score = 109 bits (272), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 67/90 (74%)
Query: 578 MGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAV 637
+GEPF P++QL+AVLPAAS LPE +++LM+ +S I+++YPE F D+NG K W+ +
Sbjct: 87 LGEPFNPYEQLMAVLPAASGHTLPEVFRSLMSHPDSEIIDFYPETFQIDMNGAKMSWQGI 146
Query: 638 VLIPFIDEVKLIKAMDAVEHLLTDEERSRN 667
L+PFIDE +L+ A+ A LLTD+ER RN
Sbjct: 147 ALLPFIDEKRLLTAVRAKYSLLTDDERERN 176
>gi|330837844|ref|XP_003292059.1| hypothetical protein DICPUDRAFT_24625 [Dictyostelium purpureum]
gi|325077732|gb|EGC31426.1| hypothetical protein DICPUDRAFT_24625 [Dictyostelium purpureum]
Length = 126
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 81/126 (64%), Gaps = 18/126 (14%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQ----------------IPEFDNLYLDMNGIIHNCS 44
MG+P FFR++ ++Y L + E + E+DNLYLDMNGIIH C+
Sbjct: 1 MGIPAFFRWLIDKYGGLIQETTEPREGDGSRSKVDFTEMNPNGEYDNLYLDMNGIIHPCA 60
Query: 45 HPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
HP + P + + I Q I+ Y+++LF +I+P+KL +MA+DGVAPRAKMNQQR RRFR+
Sbjct: 61 HP-EKGPKPQSVDDMI-QSIYEYLDLLFAIIRPRKLIYMAVDGVAPRAKMNQQRTRRFRA 118
Query: 105 AKEAEV 110
A ++ +
Sbjct: 119 ALDSRL 124
Score = 57.4 bits (137), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 36/46 (78%), Gaps = 2/46 (4%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEV 171
++++ L F P+KL +MA+DGVAPRAKMNQQR RRFR+A ++ +
Sbjct: 79 YEYLDLLFAIIRPRKLIYMAVDGVAPRAKMNQQRTRRFRAALDSRL 124
>gi|68070139|ref|XP_676981.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496914|emb|CAH93788.1| conserved hypothetical protein [Plasmodium berghei]
Length = 635
Score = 108 bits (270), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 88/152 (57%), Gaps = 12/152 (7%)
Query: 501 FSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYA 560
F++ ++K+ YY +K + ++ ++ + YI + WNLHYY+ GC SW W YP+HYA
Sbjct: 461 FTDEKKYKSYYYLHK--FGVSDSKQIQQIVKKYIEGLFWNLHYYHFGCASWHWEYPYHYA 518
Query: 561 PYISDIKDFSHLNLKYE--------MGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLEN 612
P SD+ F + +E +G+P+ + L++VLP K LLP+PY+N+
Sbjct: 519 PLCSDLLSFEKSDFFFEKVTMPHKIIGKPYSAYTHLISVLPQKDKNLLPDPYKNVYA--E 576
Query: 613 SPILEYYPEEFATDLNGKKQDWEAVVLIPFID 644
+ ++P+ D NGKK+ WE +V +PFI+
Sbjct: 577 DEVKSFFPDNVKIDPNGKKETWEYIVHLPFIN 608
Score = 108 bits (270), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 88/168 (52%), Gaps = 23/168 (13%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+KL ++ +DGV+P+AKMNQQR RRF S + + F+ NCIT G
Sbjct: 111 PQKLVYIGVDGVSPKAKMNQQRKRRFLSLFKI----------NDNSKITNLFNPNCITTG 160
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
T FM +++ L + K+ D +I SG + PGEGEHKI+ +IR
Sbjct: 161 TDFMYKINLSLNKWFKILKKKKVFNFD-----------IIYSGSDVPGEGEHKILKFIR- 208
Query: 258 MKSKPDYN-PNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKS 304
K D N N HC+YGLDADLIML L TH +LR++ K S
Sbjct: 209 ENCKNDSNFKNWNHCIYGLDADLIMLSLVTHLNNIFILRDKFKLTNDS 256
Score = 99.0 bits (245), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 72/104 (69%), Gaps = 2/104 (1%)
Query: 2 GVPKFFRYISERYPCLSEVVREY-QIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
G+P+ +++++ YP + E + Y Q + D Y+DMNG+IH+C+H N + E ++
Sbjct: 36 GIPRMYKWLTSYYPTVREELINYGQKKKVDIFYIDMNGVIHHCTHANKDALPIH-DEHEL 94
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
F +I HY++ LF +++P+KL ++ +DGV+P+AKMNQQR RRF S
Sbjct: 95 FSNILHYLKNLFYLVKPQKLVYIGVDGVSPKAKMNQQRKRRFLS 138
Score = 50.8 bits (120), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 48/82 (58%)
Query: 348 FSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLN 407
FSI ++DD V + FL+GNDF+P++P++ I G++ + Y + YI ++
Sbjct: 371 FSINRVVDDIVFLSFLVGNDFLPHIPNIDINEGSMNEILNSYIFYIYKYSNYITYKDKVH 430
Query: 408 LKRFEKFLTKLASFDFEQFREK 429
++R + L L+ +++ F+++
Sbjct: 431 IERLKIILKILSGQEYQYFKKR 452
>gi|395510109|ref|XP_003759325.1| PREDICTED: 5'-3' exoribonuclease 2-like, partial [Sarcophilus
harrisii]
Length = 117
Score = 108 bits (270), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 71/94 (75%), Gaps = 5/94 (5%)
Query: 28 EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDG 87
EFDNLYLDMNGIIH C+HP D P + E ++ IF YI+ LF +++P++L +MAIDG
Sbjct: 22 EFDNLYLDMNGIIHPCTHPEDK-PAPK-NEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDG 79
Query: 88 VAPRAKMNQQRGRRFRSAK---EAEVLEQKAKEK 118
VAPRAKMNQQR RRFR++K EA + +Q+ +E+
Sbjct: 80 VAPRAKMNQQRSRRFRASKEGMEATIEKQRVREE 113
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAK---EAEVLEQKAKEK 179
F++I F P++L +MAIDGVAPRAKMNQQR RRFR++K EA + +Q+ +E+
Sbjct: 57 FEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEATIEKQRVREE 113
>gi|67583943|ref|XP_665025.1| CG10354-PA [Cryptosporidium hominis TU502]
gi|54655348|gb|EAL34795.1| CG10354-PA [Cryptosporidium hominis]
Length = 171
Score = 106 bits (264), Expect = 2e-19, Method: Composition-based stats.
Identities = 58/126 (46%), Positives = 81/126 (64%), Gaps = 20/126 (15%)
Query: 1 MGVPKFFRYISERYP--------------CLSEV-VREYQIP-EFDNLYLDMNGIIHNCS 44
MGVP F+R++ RYP CL+++ + E I EFD LYLDMNGIIH C
Sbjct: 1 MGVPTFYRWLCNRYPLIVKELKDAIDEETCLNDLDLTEPNINGEFDCLYLDMNGIIHPCC 60
Query: 45 HPNDND-PHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFR 103
+P+ D P E ++F + YI+ L+ M++P++L +MAIDGVAPRAKMNQQR RR++
Sbjct: 61 NPSGGDKPK---DEAEMFTRVCDYIDRLYAMVKPRRLIYMAIDGVAPRAKMNQQRSRRYK 117
Query: 104 SAKEAE 109
+A E +
Sbjct: 118 TALEMD 123
Score = 75.1 bits (183), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 8/75 (10%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-------EVLEQKAKEKGERLPTE-KRF 189
P++L +MAIDGVAPRAKMNQQR RR+++A E E+ +++ + G + P +++
Sbjct: 91 PRRLIYMAIDGVAPRAKMNQQRSRRYKTALEMDYNRRAYEIAQEEFYKIGYKCPEYVEKW 150
Query: 190 DSNCITPGTPFMCRL 204
DSN ITPGTPFM RL
Sbjct: 151 DSNVITPGTPFMERL 165
>gi|70925173|ref|XP_735320.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56508876|emb|CAH84746.1| hypothetical protein PC301213.00.0 [Plasmodium chabaudi chabaudi]
Length = 241
Score = 103 bits (258), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 72/120 (60%), Gaps = 5/120 (4%)
Query: 514 YKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISD--IKDFSH 571
+ LD +E +++ YI + W L YY+ C W WYYP++YAP SD IKD S
Sbjct: 120 FHLDETDNVDEFVKEVVYKYIEGLAWVLCYYFQACPMWHWYYPYYYAPLSSDLLIKDIS- 178
Query: 572 LNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKK 631
+ +E EP LPF+QLL VLP+ S LP+ Y+ LM SPI+++YP+ F + NGKK
Sbjct: 179 --ISFEEDEPLLPFEQLLCVLPSNSSHCLPKMYRELMLKNESPIVDFYPKTFKEEENGKK 236
>gi|170105585|ref|XP_001884005.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641185|gb|EDR05447.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 350
Score = 103 bits (256), Expect = 1e-18, Method: Composition-based stats.
Identities = 72/176 (40%), Positives = 90/176 (51%), Gaps = 36/176 (20%)
Query: 547 GCVSWSWYYPHHYAPYISDIK-----------DFSHLNLKYEMGEPFLPFQQLLAVLPAA 595
G SW W+Y +HYAP IS + + L EM F P + AV PAA
Sbjct: 144 GVASWGWFYDYHYAPRISGVHRRLGCWTLLVLPIADLRGADEMSFDFQPGNAVEAV-PAA 202
Query: 596 SKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAV 655
+ + LM NSPIL++YP EFA DLNGKKQDWEA+V FIDE + +KAM A
Sbjct: 203 YGRVA----RYLMYDPNSPILDFYPLEFAQDLNGKKQDWEAIV--TFIDEERPLKAMTAR 256
Query: 656 EHLLTDEERSRNRHGPMLVYTYSNVNLGT-----ALAPDYFPAINENHAVEKPLYR 706
+H LT EER RN G +++ NLG + P +FP PLYR
Sbjct: 257 DHCLTPEERKRNAWGSSSKFSF---NLGEPTLYPSSLPGFFP----------PLYR 299
>gi|238598186|ref|XP_002394541.1| hypothetical protein MPER_05556 [Moniliophthora perniciosa FA553]
gi|215463717|gb|EEB95471.1| hypothetical protein MPER_05556 [Moniliophthora perniciosa FA553]
Length = 255
Score = 102 bits (255), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 124/249 (49%), Gaps = 26/249 (10%)
Query: 968 YLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRD 1027
Y+PSY A+++++S LS+ T S +I S + +HN+GL +K+ K +VVG+TR+D
Sbjct: 13 YVPSYMAANQVNLSGRALSKITSSFMVITSDNQ---KHNLGLCLKYEAKALKVVGYTRKD 69
Query: 1028 -ETTKKWFYTEQVVTLIKNYMKQFPEVFGFLK---DHSSDDIYLRDDVFPHQGEQ---RV 1080
E + W Y+++ + LI+ Y+++FPEVF L+ D+ +R D+F E +V
Sbjct: 70 KEGGRHWEYSQKALALIREYIQRFPEVFDGLEMEGKSGHGDMMVRADMFFGNAENPDAKV 129
Query: 1081 AQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD------TCEKVEKQITLFVKPN 1134
++ +WLK + E +D + V+ IE D + ++K I +
Sbjct: 130 KEVKAWLKSKGVRDFEPVSLFCDQLDKETVAQIEKLADSYISSRSSATIKKAIVKGIPRQ 189
Query: 1135 KLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGET-SYDAMYDV 1193
+ P + +L +F L DRV ++D VPL +GT G+ Y V
Sbjct: 190 AVLKPSDAIYRL---QGQQFALGDRVTMVKDSGGVPLSAKGT------GDWPRYQKHXMV 240
Query: 1194 VFDKPFPHG 1202
V+D PF G
Sbjct: 241 VWDAPFMSG 249
>gi|298707209|emb|CBJ29956.1| 5\'-3\' exoribonuclease 1 (Exonuclease 2) (Exonuclease II) (Exo II)
(p140) [Ectocarpus siliculosus]
Length = 662
Score = 102 bits (253), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 155/682 (22%), Positives = 274/682 (40%), Gaps = 120/682 (17%)
Query: 627 LNGKKQDWEAVVLIPFIDEVKLIKAMDAV--EHLLTDEERSRNRHGPMLVYTYSNVNLGT 684
+NGK+ WEAV ++PFID +L A+ + L+ +E RN G ++ Y +
Sbjct: 1 MNGKRNPWEAVNVLPFIDAYRLRAAVKELCPPTALSPQEAERNTRGQVVEYFH------- 53
Query: 685 ALAPDYFPAINENHA------VEKPLYRDDIYVHPNKLRKGLCQDVNLK----LYVTHFP 734
D F + E + P + P + G C L + FP
Sbjct: 54 ----DAFVSRKEMSCNPEIGLADIPQCTASSRIVPFSIEPGECFRPELPHDAIIPSAGFP 109
Query: 735 TLKHVQFTHKIENAKVKV--FQQPSRNESIIIVQDKVQV-PSLKQVADQILGKTIFINYP 791
+L HV +E KV V F SR E++++ + V P ++ ++LG++ ++N+P
Sbjct: 110 SL-HVLTVGSVEERKVPVNCFGTASRYETLVLELKRPPVLPPASALSGKVLGRSAYLNWP 168
Query: 792 HLIEIRVQAVA--------------------TKDSRISFDKNSGPVFERAAKDMQDAFQL 831
+ E +V ++ T+ +F + + A + Q A+
Sbjct: 169 LMHEAQVVGISDEKEEYRLEEVKGGGGKKRKTRVKVSTFTDEAAGRWRLKAAEEQGAYIT 228
Query: 832 SKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKY--FFGPRGKV--TQQRTFIRSTVTYA 887
+ G GVDIG ++++ +P++ + G R KV ++ V ++
Sbjct: 229 GRGVPGSG-----GVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWS 283
Query: 888 YQSAVLNLQQARESLEYKTIDEIFYPGCQ--CFALSNPHYGSGGCVISTVKEENSFIKLS 945
S + RE++ T++E F G + C N H G V + + + L
Sbjct: 284 CPSEDPRFVE-RENV---TLEERFPLGSRVTCLHGGNGHGCGGEVVAHSKGKVDVLADL- 338
Query: 946 FKVQQEPDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRH 1005
+ P+ + + Y P + L ISP + R GS+ S + G R
Sbjct: 339 ----RPPEPPFGLAIVQSVKTAYFPQHKACQTLGISPQVFGRIVGSV----SVDPG--RV 388
Query: 1006 NIGLNIK---------FSR---KNE---------EVVGF--TRRDETTKKWFYTEQVVTL 1042
++ LN+K +SR +NE VVG D + W ++ + + L
Sbjct: 389 DLALNLKQNGRYQLLGYSRCVLRNEPAWSTSDTVRVVGSAPVTEDMEARSWEFSLEAIKL 448
Query: 1043 IKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGA 1102
I Y + FP++F L H + + + + G+ ++ +I WL E A + P
Sbjct: 449 ITRYARAFPQLFHGLARHGGERFFEAEMLLGKGGKSKMEKISKWLSELETAGLQRVPLTT 508
Query: 1103 AVVDAKVVSLIEHAVDTCEK-------VEKQITLFVKPNKL---YIPKPT---LDKLCPD 1149
+ + V +E D + V+K + ++P++L ++ T +D
Sbjct: 509 RALSREAVKAVERGADVRQAVLVKNAMVKKTLLKNLEPSQLLAYHVADHTDAPMDTGGEK 568
Query: 1150 PDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIR--C 1207
PD L DR+VN+R VP G GT++ S+ A +VVFD+ F G + C
Sbjct: 569 PD----LGDRIVNMR-AKGVPFGVWGTVVAC----HSHSACVEVVFDEEFIGGGTLHGVC 619
Query: 1208 SESRGYRMPAQAMINLSYGERL 1229
S RG +P + + RL
Sbjct: 620 SNYRGALVPWATVAKIHTKARL 641
>gi|170091348|ref|XP_001876896.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648389|gb|EDR12632.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 507
Score = 102 bits (253), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 24/274 (8%)
Query: 960 LQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEE 1019
+Q+ +Y PS+ A + IS L + T S +I S E+ + N+GL++KF K +
Sbjct: 76 VQNRRSSHYFPSFKAAEMVGISGRALGKITSSFMVITSDEQ---KTNVGLSLKFEVKALK 132
Query: 1020 VVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPH-QGEQ 1078
VV ++R++ + W Y ++ + LI+ Y +FPEVF L D+S D + D+ +
Sbjct: 133 VVDYSRKE--GRHWEYNDRAIDLIREYKAKFPEVFLSL-DNSGDAMARASDILSGPDPDG 189
Query: 1079 RVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVD------TCEKVEKQITLFVK 1132
RV I +WLK + E + + + IE D + + +K I +
Sbjct: 190 RVRVIKAWLKTKGVRDFEPVSLFCDQLGKETIGEIERMADEFTKNKSSAQFKKAIVKGIP 249
Query: 1133 PNKLYIPKPTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYD 1192
+ P T +L + F L DRV ++D +VPL +G +IG+ D
Sbjct: 250 RQAVLKPAHTAYRL---QNQHFALGDRVTMVQDSGSVPLSVKGVVIGL------DSKTID 300
Query: 1193 VVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
+V+D PF G+ + RCS+ RG + +NLS
Sbjct: 301 IVWDVPFMSGITLGDRCSQYRGSTVEFNTCLNLS 334
>gi|16768996|gb|AAL28717.1| LD13761p [Drosophila melanogaster]
Length = 346
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 576 YEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDW 634
+E G +PF P +QL+ V PAAS +PEP+ LM+ SPI+++YPE+F DLNGKK W
Sbjct: 2 FEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKLMSDPESPIIDFYPEDFKIDLNGKKFAW 61
Query: 635 EAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVY 675
+ V L+PF+DE +L KA+ LT EE RN+ G +Y
Sbjct: 62 QGVALLPFVDEKRLFKALVPYYDQLTGEEVKRNKRGDNYLY 102
>gi|123490419|ref|XP_001325606.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121908508|gb|EAY13383.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 939
Score = 100 bits (250), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 191/486 (39%), Gaps = 120/486 (24%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P KL ++++DG P AK R RS++ A ++ + ++K ++ +F+ I G
Sbjct: 75 PTKLIYLSVDGTPPYAKC-----VRNRSSRLAGFMKNQKQDK-----SQIQFE---IVAG 121
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
+ FM +LHQ+L ++ K+ TD W I S + PGE EHKI +IR
Sbjct: 122 SVFMEKLHQELIKTIENKVKTD---------IAWSTPKFIYSSYHVPGEAEHKITKFIRD 172
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEET 317
++ ++ + H ++ +D+D I L L + Y +RE F S
Sbjct: 173 STTQNNFLNDYVHLVFSVDSDTIFLLLGLNMKYLVTMREAKNFTVNEKSSSSA------- 225
Query: 318 KFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
F L+++S++++Y+ E S II+D++ + FL GNDFIP +
Sbjct: 226 -FELIYISIIQEYIMEELK------------SDRRIINDFIALVFLCGNDFIPEFSE--- 269
Query: 378 INGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLE 437
LP + ++ +L I E G L KFL FE + I
Sbjct: 270 ----LPSSPETFESILDCYVKTIKEKGLFLLNENRKFL-------FENLEMLFDKIM--- 315
Query: 438 GKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWR 497
L A IK G+ N +E++ DE
Sbjct: 316 ----------------------LNAAIK--------GSTTSCASDNLKEHF---PDEYKN 342
Query: 498 TNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPH 557
+F +E + + + L Y Y+ SWS+ YP+
Sbjct: 343 QDFVNELLEQTLTNFEFVLSY-------------------------YFGKTPSWSYCYPY 377
Query: 558 HYAPYISDIKDF--SHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLEN-SP 614
++P S + + +H + + +P PF+ L P K +P+ L EN +
Sbjct: 378 EHSPPFSFLLNALKNHKETNFVLDKPLEPFEASLITAPREGKSGIPKELIALTLEENQNK 437
Query: 615 ILEYYP 620
I +Y+P
Sbjct: 438 ISKYFP 443
Score = 62.0 bits (149), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIH-NCSHPNDNDPHFRITEKQ 59
MGV F R+++ERYP + + P FD Y+D N II+ S+ N P
Sbjct: 1 MGVTFFTRWLAERYPLAFRQMDDVSKPTFDCFYIDFNAIIYFALSYYN---PESEGNFDG 57
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF 102
I +I Y++ + ++++P KL ++++DG P AK + R R
Sbjct: 58 IITEIIRYLDTIIQIVRPTKLIYLSVDGTPPYAKCVRNRSSRL 100
>gi|407849156|gb|EKG03992.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative
[Trypanosoma cruzi]
Length = 389
Score = 100 bits (249), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 507 HKTDYYHYKLDYAKVTNEVLRDQAE--C--YIRAIQWNLHYYYNGCVSWSWYYPHHYAPY 562
H+ YY K + E + + C Y+R QW + YY GC SW WYYP +YAP
Sbjct: 23 HRDKYYEKKFGWDPADREAFEKKIQLCCAEYLRGTQWVMRYYTTGCPSWDWYYPFYYAPL 82
Query: 563 ISDIKDF-SHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPE 621
+ D+ F +N+K +G P P QLLAVLP S E LPE + + S + +YPE
Sbjct: 83 LQDLAHFPGKVNVKMTLGAPRHPVLQLLAVLPRLSVEALPEELHDAVKDPESVLGVFYPE 142
Query: 622 EFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSNVN 681
+ D + ++ V+ +PF++ L A + L D G L+ + +
Sbjct: 143 KVDVDFSEAHFSYQGVLRLPFVNNSHLQSACQKLVRLEPD-------FGFTLLLCHESSR 195
Query: 682 LGTALAPDYFPAINENHAVEKPL 704
L AL + A + V KP+
Sbjct: 196 LSRAL--ESLLADKDGEKVMKPI 216
>gi|384249414|gb|EIE22896.1| single-stranded RNA 5, partial [Coccomyxa subellipsoidea C-169]
Length = 167
Score = 100 bits (248), Expect = 1e-17, Method: Composition-based stats.
Identities = 64/167 (38%), Positives = 94/167 (56%), Gaps = 20/167 (11%)
Query: 1 MGVPKFFRYISERYPCL-------SEVVREYQIPEFDNLYLDMNGIIHNCSHPN-DNDPH 52
MGVP F ++ ++YP + +E ++ DNLY+DMN +IH C+HP+ P+
Sbjct: 1 MGVPGLFGWLRKKYPLIVRPASAGAEEIQGDGDSFCDNLYIDMNHVIHACTHPSWRCTPY 60
Query: 53 FRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLE 112
++E+++F D+ Y++ LF +P++LF +A+DGVAP+AKMNQQR RRF SA E+
Sbjct: 61 --LSEEEMFLDMQIYLDHLFNTARPRRLFMVAMDGVAPQAKMNQQRTRRFFSAYREEL-- 116
Query: 113 QKAKEKGERLPTEKRFD--FITLKFCFPKKL------FFMAIDGVAP 151
K E R+P FD IT F +L FF A G P
Sbjct: 117 SKELEIEARIPELPSFDGNVITPSTAFMARLAGMLRAFFAAKLGADP 163
Score = 84.0 bits (206), Expect = 9e-13, Method: Composition-based stats.
Identities = 43/85 (50%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P++LF +A+DGVAP+AKMNQQR RRF SA E+ K E R+P FD N ITP
Sbjct: 83 PRRLFMVAMDGVAPQAKMNQQRTRRFFSAYREEL--SKELEIEARIPELPSFDGNVITPS 140
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLW 222
T FM RL LR F K+ D W
Sbjct: 141 TAFMARLAGMLRAFFAAKLGADPCW 165
>gi|402582600|gb|EJW76545.1| hypothetical protein WUBG_12547, partial [Wuchereria bancrofti]
Length = 123
Score = 97.8 bits (242), Expect = 5e-17, Method: Composition-based stats.
Identities = 54/114 (47%), Positives = 73/114 (64%), Gaps = 23/114 (20%)
Query: 1 MGVPKFFRYISERYP-CLSEVVRE-------YQIP-----------EFDNLYLDMNGIIH 41
MGVP FFR+++ +YP + + V E ++P EFDNLYLDMNGIIH
Sbjct: 7 MGVPAFFRWLTRKYPSVVVDAVEEKPRDLNGIRVPVNTVDPNPNFQEFDNLYLDMNGIIH 66
Query: 42 NCSHPNDND-PHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKM 94
C+HP D P TE+++F IF YI+ LF +++P+KL +MAIDGVAPRAK+
Sbjct: 67 PCTHPEDRPCPK---TEEEMFMLIFEYIDRLFAIVRPRKLLYMAIDGVAPRAKV 117
>gi|340501949|gb|EGR28676.1| hypothetical protein IMG5_170600 [Ichthyophthirius multifiliis]
Length = 698
Score = 97.8 bits (242), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 7/160 (4%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSNCITPG 197
P+ ++ +DG PRAKMNQQR RRF + K ++ K +G ++ E+ SN ++PG
Sbjct: 79 PQSQVYLMMDGTCPRAKMNQQRQRRFHAQKNLNQTKEDFKNQGIQIK-EQTVPSNSVSPG 137
Query: 198 TPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYIRY 257
TPFM L++++R + KI ++ + + +K + +I+S GEGEHKI++ IR
Sbjct: 138 TPFMFELNKRIREHFEKKIQEEQPLNEKTD-FTYKRLHIIISDSNCQGEGEHKILEVIRK 196
Query: 258 MKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREE 297
K N + HC+ DADLI+L L +LRE+
Sbjct: 197 HK-----NFKLTHCIVSPDADLILLSLSAIGRKILILREQ 231
Score = 77.4 bits (189), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEK- 58
MGVP +F +I RYP C+ ++ + + D LY+D+N + + D+ + + +
Sbjct: 1 MGVPGYFGWICRRYPFCIRKIYQSGKKKYVDCLYIDVNSFCY--QYIKDDLNQYLLNPQS 58
Query: 59 --QIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAK 116
QI+Q+I +IE + ++I+P+ ++ +DG PRAKMNQQR RRF + K ++ K
Sbjct: 59 LDQIYQNILTHIESIIQLIEPQSQVYLMMDGTCPRAKMNQQRQRRFHAQKNLNQTKEDFK 118
Query: 117 EKG 119
+G
Sbjct: 119 NQG 121
>gi|449687660|ref|XP_004211506.1| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Hydra
magnipapillata]
Length = 300
Score = 97.1 bits (240), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 139/294 (47%), Gaps = 17/294 (5%)
Query: 647 KLIKAMDAVEHLLTDEERSRNRHGPMLVYTYS-NVNLGTALAPDYFPAINE-------NH 698
+L+ AM LT+EE+SRN G + Y N+NL P P +N+
Sbjct: 2 RLLDAMAQNYDQLTEEEKSRNTFGNAYEFMYDENLNLT---YPSSHPGLNDITPCKVKQV 58
Query: 699 AVEKPLYRDDIYVHPNKLRKGLCQDVNLKLYVTHFPTLKHVQFTHKIENAKVKVFQQPSR 758
+ + LYR I N ++KGL + L +Y FPTLKH++ A +KVF+ S+
Sbjct: 59 EISQDLYRLKI----NDIKKGLSKGAQLDIYSPGFPTLKHLKHKCFFTQAGIKVFKHKSK 114
Query: 759 NESIIIVQDKVQVPSLKQVADQILGKTIFINYPHLIEIRVQAVATKDSRISFDKNSGPVF 818
E+ II + + +++ A+ ++GK++F+ +P+++E V +V +D +
Sbjct: 115 IENAIIKITEQKSMDIEETANLMIGKSVFVEWPYMVEALVTSVMNEDLCYYLTNENELAM 174
Query: 819 ERAAKDMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRT 878
+ + F+ I+ + + G+++G+ +V + + KY F GK + +
Sbjct: 175 KMVDGEDYSNFKKEIAVISSYHLFERGINLGDVTTIVAAKLLLGEKYKFDG-GKASLVKE 233
Query: 879 FIRSTVTYAYQSAVLNLQQA-RESLEYKTIDEIFYPGCQCFALSNPHYGSGGCV 931
+ ++ Y Q+ V ++ RE K+ ++F C LS PHYG G V
Sbjct: 234 WSQTPTFYPLQTVVQDVSVCKREKNVIKSTSDLFPVHSPCVILSQPHYGFTGKV 287
>gi|322510814|gb|ADX06128.1| putative XRNA family 5'-3' exonuclease [Organic Lake phycodnavirus
1]
Length = 465
Score = 97.1 bits (240), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 121/256 (47%), Gaps = 72/256 (28%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
+ L+ F K F+ DGVAP AKM QQ+ RR++S +L ++ D
Sbjct: 55 LNLQKLFSPKKTFICFDGVAPLAKMVQQKQRRYKSLLTNTILGTQS-------------D 101
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
+N ITPGT FM L+ LR DK+ D ILSG + PGEGE+K
Sbjct: 102 TNKITPGTLFMNELNTYLR---------DKM-----------DTHTILSGTDEPGEGENK 141
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQ 310
I ++R + D H +YGLDADLIML SLL++ K
Sbjct: 142 IFHFMR--RESED----EHHIIYGLDADLIML---------SLLQQNYK----------- 175
Query: 311 IVTPEETKFF--LLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIID--DWVLMGFLIGN 366
I ETK+F L +++ DY+ L+ L + I I+D ++ + FL GN
Sbjct: 176 IFLYRETKYFEYLNYINKKYDYI-LDIDLLGK--------QICEIVDVEEYCFLCFLCGN 226
Query: 367 DFIPNLPDLHIINGAL 382
DF+P+ P ++I NG +
Sbjct: 227 DFLPHFPSINIRNGGI 242
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 15/111 (13%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MG+P +F YI + + +++ I NLYLD N II+ H N E I
Sbjct: 1 MGIPSYFSYILKHH---KHILKRNNIV-CHNLYLDANSIIY--EHLN--------KEGNI 46
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVL 111
++ ++H I L ++ PKK F + DGVAP AKM QQ+ RR++S +L
Sbjct: 47 YEHVYHSILNLQKLFSPKKTF-ICFDGVAPLAKMVQQKQRRYKSLLTNTIL 96
>gi|123493433|ref|XP_001326289.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909201|gb|EAY14066.1| hypothetical protein TVAG_478910 [Trichomonas vaginalis G3]
Length = 868
Score = 96.7 bits (239), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 159/360 (44%), Gaps = 75/360 (20%)
Query: 219 DKLWKDTLSLWV---------WKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMR 269
+++++D L W+ W+ VI SG + PGE E KI D++R KP+++PN R
Sbjct: 106 NQIFEDDLKRWIEELINFDEYWQKPRVIFSGSKVPGEAETKIFDFLRQEIHKPEWDPNKR 165
Query: 270 HCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRD 329
HC+ D+DLI++ L +H P + + + N N ++ +++++L+R+
Sbjct: 166 HCIVTNDSDLILMSLRSHIPNIDIYND-IYQNKIKNGMLEPYISFSAGSVDVININLLRE 224
Query: 330 YLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY 389
YL +FG + E I DD+VL+ L ND+ P D + ++ L + Y
Sbjct: 225 YLFHDFG-----------INDERIFDDFVLLVNLYSNDYRPKF-DSDLSKISIDDLIETY 272
Query: 390 QEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFH 449
+ + +I E +NL++ + F+ K ++ Q +IQ +
Sbjct: 273 KSEPSCI--FITEKDNVNLEKLKIFIMKFMERNYLQ------EIQNQQQN---------- 314
Query: 450 KEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKT 509
K +++ D+ T+ N+ ++E Y S +DE +FS+
Sbjct: 315 ---------------KTSENQNDNTTKIEENHLDFESYIKSKKDE-----YFSK------ 348
Query: 510 DYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDF 569
K T E + C I +I + Y +G SWSW Y +H+AP + + D+
Sbjct: 349 ---------RKTTPEETEKISHCLIDSILFTYKEYSSGIPSWSWIYKYHFAPPLCVVIDY 399
>gi|336373302|gb|EGO01640.1| hypothetical protein SERLA73DRAFT_132069 [Serpula lacrymans var.
lacrymans S7.3]
Length = 70
Score = 94.7 bits (234), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Query: 36 MNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMN 95
MNGI+H C+HP DN P TE+++ DIF Y E + M++P+K+ FMAIDGVAPRAKMN
Sbjct: 1 MNGIVHPCTHP-DNKPAPE-TEEEMMVDIFSYTERVVNMVRPRKVLFMAIDGVAPRAKMN 58
Query: 96 QQRGRRFRSAKE 107
QQR RRFRSA+E
Sbjct: 59 QQRSRRFRSAQE 70
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/31 (83%), Positives = 29/31 (93%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE 168
P+K+ FMAIDGVAPRAKMNQQR RRFRSA+E
Sbjct: 40 PRKVLFMAIDGVAPRAKMNQQRSRRFRSAQE 70
>gi|343959368|dbj|BAK63541.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
Length = 370
Score = 94.0 bits (232), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 576 YEMG-EPFLPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDW 634
+E G +PF P +QL+ V PAAS LP ++ LM+ +S I+++YPE+FA DLNGKK W
Sbjct: 5 FEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAW 64
Query: 635 EAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHG 670
+ V L+PF+DE +L A++ V LT EE RN G
Sbjct: 65 QGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLG 100
>gi|71425179|ref|XP_813034.1| 5'-3' exonuclease XRNB [Trypanosoma cruzi strain CL Brener]
gi|70877881|gb|EAN91183.1| 5'-3' exonuclease XRNB, putative [Trypanosoma cruzi]
Length = 1068
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 8/108 (7%)
Query: 189 FDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGE 248
FDSNCI+PGT FM ++ + V+ K+ D L W + V+ SG TPGEGE
Sbjct: 293 FDSNCISPGTAFMVKVTNAILTMVQDKLAN----GDPL----WAGLRVVFSGANTPGEGE 344
Query: 249 HKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLRE 296
HKI+D++R S P +N H + GLDADLI L L H P+ LLR+
Sbjct: 345 HKIVDFLRTQSSYPGFNGKGAHVIAGLDADLIFLSLSLHIPHILLLRD 392
Score = 90.1 bits (222), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRIT-EKQ 59
MGVPKF +++++YP E+V + + LY+D+NG+IH C H ++ DP E++
Sbjct: 90 MGVPKFASWLTKKYP---EMVSDVIPADVHGLYIDLNGLIHPCCH-SERDPSVAARPEEE 145
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRS 104
Q I +E+L ++P + ++A DGVAPRAKMNQQR RR+ S
Sbjct: 146 KLQCICFKVEVLLATVRPHDILYIATDGVAPRAKMNQQRARRYMS 190
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 135/327 (41%), Gaps = 72/327 (22%)
Query: 353 IIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY-QEVLPTLDGYINEGGY-LNLKR 410
+IDD+++MG L+GNDF+P LP + L ++Y VLP G++ G + + L +
Sbjct: 561 VIDDFIVMGMLMGNDFLPRLPGAFCGESVMDNLLELYVSNVLPY--GFLTSGYHEIYLPQ 618
Query: 411 FEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD 470
++ L A + +FR +F+ +K+M P AA
Sbjct: 619 LQRLLRSYAKIETVKFR---------------RFA-----LSNKKMTPKEAA-------- 650
Query: 471 YDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQA 530
E YS DE+WR + + G L +
Sbjct: 651 ---------------EPLYSPLDEQWRQTYLTSTGLTGN----------------LEEAC 679
Query: 531 ECYIRAIQWNLHYYYNGC--VSWSWYYPHHYAPYISDIKDF------SHLNLKYEMGEPF 582
+ Y+ +++ YY SWSW+YP H+AP+ DI D+ ++L P
Sbjct: 680 KKYVEGLRFVWRYYSGNASTCSWSWHYPFHHAPFALDIADYLQRCDLTNLPPPPLETTPP 739
Query: 583 LPFQQLLAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGK-KQDWEAVVLIP 641
F QLL +LP S LLP ++M + E +P + D +D+ A VL+P
Sbjct: 740 DMFLQLLCILPPTSHALLPAVLGDVMLNPPEELRETFPSMWRVDYTAAYGKDYLAEVLLP 799
Query: 642 FIDEVKLIKAMDAVEHLLTDEERSRNR 668
F + L + +++ T EE+ R R
Sbjct: 800 FANVSALREVVESSRPYFTKEEQERGR 826
Score = 45.1 bits (105), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRRFRS 165
P + ++A DGVAPRAKMNQQR RR+ S
Sbjct: 163 PHDILYIATDGVAPRAKMNQQRARRYMS 190
>gi|71665017|ref|XP_819483.1| 5'-3' exonuclease XRNC [Trypanosoma cruzi strain CL Brener]
gi|70884786|gb|EAN97632.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 880
Score = 91.7 bits (226), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 125/272 (45%), Gaps = 41/272 (15%)
Query: 128 FDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEK 187
D I L+ P+ L ++A+DG++P K+ QQR RR R + +
Sbjct: 67 LDDIVLRLVRPRFLVYLAVDGISPMGKLAQQRSRRRRRSGGGSRGRNAVE---------- 116
Query: 188 RFDSNCITPGTPFMCRLHQQLRYFVKLK---ITTDKLWKDTLSLWVWKD----------V 234
+DSN I+ GTPFM RL + L ++ + I ++L +D L + +
Sbjct: 117 -WDSNSISVGTPFMSRLTEALHFYCASRAERINGERL-RDELQQVARGNTTGGDVPVTPI 174
Query: 235 CVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLL 294
I+ PGEGE KI D IR +S+ Y+PN H + D D+ + L HEP +L
Sbjct: 175 TFIVDDVWRPGEGESKIADAIRRFRSQSTYDPNTSHVICSSDTDVTVCSLILHEPRIHVL 234
Query: 295 REEVK---FNTKSNKGG------SQIVTPEETKFFLLHL--SLMRDYLELEFGK---LKE 340
R E + +++GG +Q+ + FF +H +R+ L L+ + +E
Sbjct: 235 RYECSPSHHSGGASRGGDSGSWRNQVGDAWASTFFSIHAFREELRNKLRLQTSRKDSAEE 294
Query: 341 PGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
+ F E + D V + L GNDF+P++
Sbjct: 295 AERRNRQF--ERALHDVVFVLLLFGNDFLPSV 324
Score = 57.8 bits (138), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 1 MGVPKFFRYISERY-PCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEK 58
MGVP ++ R+ PC + P D LY+D+NG+++ + + +
Sbjct: 1 MGVPLLLTWLKRRFAPCF---LSSSSCPAADCLYIDVNGLVYQAAALATASEASAVDIDA 57
Query: 59 QIFQDIFHYIE-ILFRMIQPKKLFFMAIDGVAPRAKMNQQ 97
I + +F ++ I+ R+++P+ L ++A+DG++P K+ QQ
Sbjct: 58 AILRKLFDILDDIVLRLVRPRFLVYLAVDGISPMGKLAQQ 97
>gi|407400381|gb|EKF28633.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative,
partial [Trypanosoma cruzi marinkellei]
Length = 243
Score = 91.3 bits (225), Expect = 5e-15, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 76/123 (61%), Gaps = 10/123 (8%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEKQ 59
MGVPKF +++++YP E+V + + LY+D+NG+IH C H ++ DP E++
Sbjct: 95 MGVPKFALWLTKKYP---EMVSDVIPADVHGLYIDLNGLIHPCCH-SERDPSVAARPEEE 150
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE-----AEVLEQK 114
Q I +E+L ++P +F++A DGVAPRAKMNQQR RR+ + + A ++E+
Sbjct: 151 KLQCICSEVEVLLATVRPHDIFYIATDGVAPRAKMNQQRARRYMNRAKIMTSGAAIVEEV 210
Query: 115 AKE 117
+E
Sbjct: 211 VRE 213
Score = 48.9 bits (115), Expect = 0.029, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 104 SAKEAEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRF 163
S ++ V + +EK + + +E T++ P +F++A DGVAPRAKMNQQR RR+
Sbjct: 137 SERDPSVAARPEEEKLQCICSEVEVLLATVR---PHDIFYIATDGVAPRAKMNQQRARRY 193
Query: 164 RSAKE-----AEVLEQKAKE 178
+ + A ++E+ +E
Sbjct: 194 MNRAKIMTSGAAIVEEVVRE 213
>gi|407868229|gb|EKG08789.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 879
Score = 90.9 bits (224), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 124/272 (45%), Gaps = 41/272 (15%)
Query: 128 FDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEK 187
D I L+ P+ L ++A+DG++P K+ QQR RR R + +
Sbjct: 67 IDDIVLRLVRPRFLVYLAVDGISPMGKLAQQRSRRRRRSGGGSRGRNAVE---------- 116
Query: 188 RFDSNCITPGTPFMCRLHQQLRYFVKLK---ITTDKLWKDTLSLWVWKD----------V 234
+DSN I+ GTPFM RL + L ++ + I ++L +D L + +
Sbjct: 117 -WDSNSISVGTPFMSRLTEALHFYCASRAERINGERL-RDELQQVARGNTTGGDVPVTPI 174
Query: 235 CVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLL 294
I+ PGEGE KI D IR +S+ Y+PN H + D D+ + L HEP +L
Sbjct: 175 TFIVDDVWRPGEGESKIADAIRRFRSQSTYDPNTSHIICSSDTDVTVCSLILHEPRIHVL 234
Query: 295 REEVK---FNTKSNKGG------SQIVTPEETKFFLLHL--SLMRDYLELEFGK---LKE 340
R E +++GG +Q+ + FF +H +R+ L L+ + +E
Sbjct: 235 RYECSPSHHGGGASRGGDSGSWRNQVGDAWASTFFSIHAFRGELRNKLRLQTSRKDSAEE 294
Query: 341 PGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
+ F E + D V + L GNDF+P++
Sbjct: 295 AERRNRQF--ERALHDVVFVLLLFGNDFLPSV 324
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 1 MGVPKFFRYISERY-PCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEK 58
MGVP ++ R+ PC + P D LY+D+NG+++ + + +
Sbjct: 1 MGVPLLLTWLKRRFAPCF---LSSSSCPAADCLYIDVNGLVYQAAALATASEASAVDIDA 57
Query: 59 QIFQDIFHYIE-ILFRMIQPKKLFFMAIDGVAPRAKMNQQ 97
I + +F I+ I+ R+++P+ L ++A+DG++P K+ QQ
Sbjct: 58 AILRKLFDIIDDIVLRLVRPRFLVYLAVDGISPMGKLAQQ 97
>gi|291336199|gb|ADD95772.1| hypothetical protein [uncultured organism MedDCM-OCT-S08-C195]
Length = 293
Score = 90.9 bits (224), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 123/266 (46%), Gaps = 40/266 (15%)
Query: 131 ITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFD 190
I +++ P + ++A DGVAP AKMNQQR RR + +++ + + ++
Sbjct: 44 IYIEYIQPSETVYIAFDGVAPFAKMNQQRTRRHKGMITSKINNVIGVNE-----NQMKWT 98
Query: 191 SNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHK 250
++ ITPGT FM +L ++ K + + K +I+S + GEGEHK
Sbjct: 99 TSHITPGTLFMNKLSNRV----------TKAFGGLEGHYGVKK--IIVSCSDEAGEGEHK 146
Query: 251 IMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGL--CTHEPYFSLLREEVKFNTKSNKGG 308
+ Y+R S D + +YGLD+DLIML L C + RE +F G
Sbjct: 147 LFQYVR---SHKDTFQDTNMVIYGLDSDLIMLSLFHCEMFKNLYIFRETPEF-------G 196
Query: 309 SQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENI--IDDWVLMGFLIGN 366
I++ E+ DY+ + L ++ + D++ M FL+GN
Sbjct: 197 KGILSEEQCSM---------DYMYMHIHSLARAILIEMSCDEGQYFRLYDYMFMCFLLGN 247
Query: 367 DFIPNLPDLHIINGALPLLYKVYQEV 392
DF+P+ P L+I + +L Y+++
Sbjct: 248 DFLPHFPSLNIRTMGIEVLLDNYKKI 273
Score = 48.1 bits (113), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 34 LDMNGIIHN----------CSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFM 83
+D N II++ +H D F E ++ Q + + I I IQP + ++
Sbjct: 1 MDCNSIIYDEVRKLQEEYTSNHTEFEDEQF---ENKLIQCVINTIGIYIEYIQPSETVYI 57
Query: 84 AIDGVAPRAKMNQQRGRRFRSAKEAEV 110
A DGVAP AKMNQQR RR + +++
Sbjct: 58 AFDGVAPFAKMNQQRTRRHKGMITSKI 84
>gi|154422101|ref|XP_001584063.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121918308|gb|EAY23077.1| hypothetical protein TVAG_183130 [Trichomonas vaginalis G3]
Length = 859
Score = 90.5 bits (223), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 102/190 (53%), Gaps = 18/190 (9%)
Query: 230 VWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEP 289
+WK VI +G PGE E KI DYIR +KPD++ N RHC++ D+DLI++ L +H
Sbjct: 132 IWKRPKVIFAGSAVPGEAETKIFDYIRQEMNKPDWDLNKRHCIFTPDSDLILMTLRSHIQ 191
Query: 290 YFSLLREEVKFN-TKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPF 348
F L+ + +FN + + + +TP + ++ ++++R+YL+L+F
Sbjct: 192 NFDLIYQNYRFNLVRGTRTPNFPITP--SSLTVISINILREYLKLDFE-----------I 238
Query: 349 SIENIIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNL 408
+ E I DD+V + ++G+D+ L D ++N L L + Y+ P + +I + N
Sbjct: 239 ADEQIFDDFVTICDILGSDYCAPLED--VVNLDLESLIQSYKSE-PHCN-FITDCDNFNF 294
Query: 409 KRFEKFLTKL 418
+ FL K+
Sbjct: 295 DNLKIFLNKI 304
>gi|407394522|gb|EKF26964.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi marinkellei]
Length = 367
Score = 87.8 bits (216), Expect = 5e-14, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 123/270 (45%), Gaps = 37/270 (13%)
Query: 128 FDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEK 187
D I L+ P+ L ++A+DG++P K+ QQR RR R + +
Sbjct: 67 LDDIVLRLVRPRFLVYLAVDGISPMGKLAQQRSRRRRRSGGGSRGRNAVE---------- 116
Query: 188 RFDSNCITPGTPFMCRLHQQLRYFVKLK---ITTDKLWKDTLSLWVWKD----------V 234
+DSN I+ GTPFM RL + L ++ + + ++L +D L + +
Sbjct: 117 -WDSNSISVGTPFMSRLTEALHFYCASRAERMNGERL-RDELQQAARGNTRGGDDPVTPI 174
Query: 235 CVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLL 294
I+ PGEGE KI D IR +S+P Y+PN H + D D+ + L HEP +L
Sbjct: 175 TFIVDDVWRPGEGESKIADAIRRFRSQPTYDPNTSHIICSSDTDVTVCSLILHEPRIHVL 234
Query: 295 REEVKFNTKS---NKGG------SQIVTPEETKFFLLHL--SLMRDYLELEFG-KLKEPG 342
R E + S ++GG +Q+ + FF ++ +R+ L L+ K
Sbjct: 235 RYECSPSHHSGGASRGGDSGSWRNQVGDAWASTFFSIYAFREALRNKLRLQTSRKDSTEE 294
Query: 343 VLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
V E + D V + L GNDF+P++
Sbjct: 295 VERRNRQFERALHDVVFVLLLFGNDFLPSV 324
Score = 52.0 bits (123), Expect = 0.003, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 1 MGVPKFFRYISERY-PCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEK 58
MGVP ++ R+ PC + P D LY+D+NG+++ + + +
Sbjct: 1 MGVPLLLTWLKRRFAPCF---LSSSSCPAADCLYIDVNGLVYQAAALATASEASAVDIDA 57
Query: 59 QIFQDIFHYIE-ILFRMIQPKKLFFMAIDGVAPRAKMNQQ 97
I + +F ++ I+ R+++P+ L ++A+DG++P K+ QQ
Sbjct: 58 AILRKLFDILDDIVLRLVRPRFLVYLAVDGISPMGKLAQQ 97
>gi|342181047|emb|CCC90525.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 244
Score = 87.8 bits (216), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 104/243 (42%), Gaps = 45/243 (18%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP+F ++ +YP + + LY+D+NGIIH C H + + + E++
Sbjct: 1 MGVPRFTSWLRNKYP---ATISKGGPSTAHGLYVDLNGIIHPCCHSDFDSTIALLPEEEK 57
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRF-----RSAKEAEVLEQKA 115
I +++L ++++P + ++AIDGVAPRAKMNQQR RR+ S +
Sbjct: 58 LSCICSELDLLVKIVKPTDVLYIAIDGVAPRAKMNQQRARRYMVHATHSKPSTRASDCDG 117
Query: 116 KEKGERLPTEKRFDFITLKFC-FPKKLFFMAIDGVA------------------------ 150
K G TE F + P F A G+
Sbjct: 118 KNSGSST-TEDVFQGTSSGGVEMPDDRFHEARQGLLEDPLYNGSLFVQESSSSGGLCDVM 176
Query: 151 -----PRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEK----RFDSNCITPGTPFM 201
P + + R RS EA + +A + +P + +FD NCI+PGT FM
Sbjct: 177 ETNFPPHSGDHDDRNMSHRS--EAVNDDGEAFDIVSEIPVDDVGVTKFDHNCISPGTEFM 234
Query: 202 CRL 204
++
Sbjct: 235 SKV 237
>gi|145552344|ref|XP_001461848.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429684|emb|CAK94475.1| unnamed protein product [Paramecium tetraurelia]
Length = 920
Score = 84.3 bits (207), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 19/169 (11%)
Query: 526 LRDQAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDI-----KDFSHLN-----LK 575
L D Y+ I + L YY+ G SW WYY ++YAP DI + L+ +
Sbjct: 46 LEDMCINYMEGIYFVLQYYFKGVPSWEWYYHYYYAPLCGDIVGVVSQIVQQLSDQEQPII 105
Query: 576 YEMGEPFLPFQQLL-AVLPAASKELLPEPYQNLMTLENSPIL----EYYPEEFATDLNGK 630
+ +P+ PF+QLL ++L + LLPEPY L+T + + IL +YYPE F TD G
Sbjct: 106 FTKDKPYPPFKQLLPSILTPENAMLLPEPYGKLLTDKENSILRTPIDYYPESFETDSYGT 165
Query: 631 KQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRNRHGPMLVYTYSN 679
+ + + IPF+D + +A +++ D SRN + Y Y +
Sbjct: 166 MYEHQHITKIPFLDCNLVEQAYNSI----PDTHDSRNEQALSIFYQYDS 210
>gi|302814256|ref|XP_002988812.1| hypothetical protein SELMODRAFT_427492 [Selaginella moellendorffii]
gi|300143383|gb|EFJ10074.1| hypothetical protein SELMODRAFT_427492 [Selaginella moellendorffii]
Length = 298
Score = 83.6 bits (205), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 34/265 (12%)
Query: 138 PKKLFFMAIDGVAPRAKMNQQRGRR-FRSAKEAEVLEQKAK---------EKGERLPTEK 187
P KL F+A+DG P K+ + ++ R ++A + + + G+ +P +
Sbjct: 55 PTKLVFLALDGRPPTPKLFSKLFKKPCRYNRDASLSSLSSSEDELDSTKGQTGDLIPRNR 114
Query: 188 RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEG 247
+ + GTPFM RL +LR FV + + + I+S E GEG
Sbjct: 115 KAKMAMVRHGTPFMNRLESELRRFVASMMLSSSDDHRRRRSMTSSRLQWIVSTSEEDGEG 174
Query: 248 EHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKG 307
E KI ++IR + +N + HC+ G DADLIML L S L ++ ++ K
Sbjct: 175 ELKIFNHIRALP----FNAHDFHCVVGRDADLIMLALA------SPLSRKINIVRQTPKD 224
Query: 308 GSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGND 367
G I + +L+RD+ E++ ++EP + + + + D V + FL+GND
Sbjct: 225 GVMIYKLISIE------TLVRDF-EVQ---MEEPCSVR----LRSTMRDLVFLCFLLGND 270
Query: 368 FIPNLPDLHIINGALPLLYKVYQEV 392
F+P L L I N + L + Y EV
Sbjct: 271 FLPGLEALTIRNNGIDKLQQTYMEV 295
>gi|440796943|gb|ELR18040.1| 5'3' exoribonuclease, putative [Acanthamoeba castellanii str. Neff]
Length = 1117
Score = 82.8 bits (203), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 153/429 (35%), Gaps = 161/429 (37%)
Query: 1 MGVPKFFRYISERYP-CLSEVVREYQIPE------------FDNLYLDMNGIIHNCSHPN 47
MG+ F +++ + YP C V + P FD++Y+D+NG IH
Sbjct: 1 MGIAGFQKWLEKHYPHCFIPVPDAPRRPAPGERAPPAVKDYFDHIYVDLNGYIHTVGRRA 60
Query: 48 DNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKE 107
N E+Q+F L F +DG+
Sbjct: 61 AN-------EEQLF-----------------TLLFRELDGL------------------- 77
Query: 108 AEVLEQKAKEKGERLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAK 167
K C ++ F+AIDG A AK+ QR RR +A
Sbjct: 78 -------------------------FKVCVARQSIFLAIDGPASAAKLITQRKRRLGAAS 112
Query: 168 ------------EAEVLEQKAKEKG-----ERLPTEKRFDSNCITPGTPFMCRLHQQLRY 210
+ +V E +A+ +R+ + F+ +T GTPFM RL L +
Sbjct: 113 KQDRQAKAKAQPQPQVAESEAQTGAPAVSKKRVKKKGEFNLLQVTAGTPFMYRLKNALCF 172
Query: 211 FVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIMDYI---RYMKSKPDYNPN 267
+ ++ +D + T + +SG + PGEGE KIM++I S P NP
Sbjct: 173 WACSRLQSDPKYHFTR---------IYISGPDVPGEGELKIMEFIVSHANADSSPPPNPQ 223
Query: 268 MR----------------------HCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSN 305
R H + G DADLI+LGL S+L+ NT+
Sbjct: 224 ERVFAYQTGFADQERNAEKFRRDSHLIVGTDADLILLGLS------SMLQNVFILNTQRG 277
Query: 306 KGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIID--DWVLMGFL 363
+ + + E L H SFPF + D+VL+ L
Sbjct: 278 QSSKLLFSIWEFCRSLEH---------------------SFPFRGHCNMTRLDFVLISLL 316
Query: 364 IGNDFIPNL 372
GND++P L
Sbjct: 317 QGNDYLPKL 325
>gi|219111221|ref|XP_002177362.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411897|gb|EEC51825.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 642
Score = 82.8 bits (203), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 122/536 (22%), Positives = 215/536 (40%), Gaps = 93/536 (17%)
Query: 771 VPSLKQVADQILGKTIFINYPHLIEIRVQAV--ATKDSRISFDKN-----SGPVFERAAK 823
+P ++ +A IL K++FIN+P + E +V A+ TK+ RI K + R A
Sbjct: 55 LPGVELLAPNILDKSLFINWPMMHEGKVVAICDGTKEVRIVNGKLQTNQLTPSAAARWAS 114
Query: 824 DMQDAFQLSKKSITDGYYTKLGVDIGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRST 883
+ + Q+ +G GV I ++ + P++ K + ++ F
Sbjct: 115 ESEAMAQMYHTG--NGVPGSGGVQIDEIKIRLKLLPLQGMKTN---PANGSSKKLFGIEE 169
Query: 884 VTYAYQSAVLNLQQARESLEYK---TIDEIFYPGCQCFALSNPHYGSGGCVISTVKEENS 940
Q A+ + T+ E F + G G V+ ++
Sbjct: 170 ADVPLQLALWQAPAPDPRFVERGPMTLSERFPESSSVVLTKGKYRGCKGRVVGVADRKS- 228
Query: 941 FIKLSFKVQQEP-DLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTE 999
+ KV+ P +L + + +++ S A L ++P L + TG + E
Sbjct: 229 ---VGVKVEVIPAELPFGLAIARSVRESHISSSDAAKILKMNPGLFGKVTGRLQF----E 281
Query: 1000 EGAKRHNIGLNIK---------FSRKNEE-----------------------VVGFTRRD 1027
+G R+++GLN+K ++RK E VVG +R
Sbjct: 282 QG--RYDLGLNLKSSDGMCVVGYTRKKWEPQSDLGKKGASLNNAWMAGDSLLVVGSSRNQ 339
Query: 1028 -----ETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQ 1082
E +W YT + + L+++Y ++FP++F + ++ Y + +F +GE +
Sbjct: 340 IEEDREDRIQWEYTPKAIRLVEDYRREFPQLFANIAKKPNEKKYDANKIFGSKGEAWLPV 399
Query: 1083 IVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLYIPKPT 1142
I WL + AK P + + V+ ++ A D + + + K + + IP
Sbjct: 400 IREWLDKHETAKMPRTPVSTQSMSHEAVAAVQKAAD-VRSIALKKKGYPKESLIKIPGSA 458
Query: 1143 L---------DKLCPD-------PDTKFKLFDRVVNIRDCY-TVPLGYRGTIIGIVQGET 1185
L D L P+ PD L DRVVN+ C +P G RGTI+GI + T
Sbjct: 459 LYREGSTGATDVLSPEDLNENVAPD----LGDRVVNL--CADGIPFGARGTIVGIHKAST 512
Query: 1186 SYDAMYDVVFDKPFPHGVKIR--CSESRGYRMPA--QAMINLSYGERLCGNSNPHV 1237
+ +VV D+ F G ++ CS RG A + + N+ G + N HV
Sbjct: 513 T--GSVEVVMDEEFMGGSSLQGACSNFRGSGRAAVERIIANIELGVQQDANRKAHV 566
>gi|344302259|gb|EGW32564.1| hypothetical protein SPAPADRAFT_61629 [Spathaspora passalidarum NRRL
Y-27907]
Length = 483
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 27/231 (11%)
Query: 1006 NIGLNIKFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDI 1065
NIGL +KF K E+V+G+TR+ K W ++ +TLI +Y +FP++F L SS DI
Sbjct: 10 NIGLELKFETKREKVLGYTRKSNNGKFWEFSPLAITLINSYKTKFPQLFAKLSALSSKDI 69
Query: 1066 YLRDDVFPHQGEQRVAQIVSWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEK 1125
V + + ++ SWLKE AKA++ P V + SL + + E+ +
Sbjct: 70 ---PKVAEISSSEEIKEVRSWLKE---AKADLIP-----VSLESESLTKFSFRAIEQYME 118
Query: 1126 QITLFVKPNK----LYIPKPTLDKLCPD----PDTKFKLFDRVVNIRDCYTVPLGYRGTI 1177
L P +P+ + D +F+L DR+V ++D VP+ +GT+
Sbjct: 119 TYILDQVPTVDRAIRGVPRDAILNASESYQLLGDQRFELGDRIVYVQDFGKVPIMSKGTV 178
Query: 1178 IGI--VQGETSYDAMYDVVFDKPFPHGVKI--RCSESRGYRMPAQAMINLS 1224
I V +TS V+FD P G + + + RG + + ++NL+
Sbjct: 179 ASILTVGSKTS----LGVIFDHPLLGGSDMNGKLTSKRGLVIDSSLVLNLT 225
>gi|308081609|ref|NP_001182843.1| uncharacterized protein LOC100501093 [Zea mays]
gi|238007642|gb|ACR34856.1| unknown [Zea mays]
Length = 435
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 589 LAVLPAASKELLPEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKL 648
+ V PAAS LP Y+ LMT NSPI+++YP +F D+NGK+ W+ + +PFI+E +L
Sbjct: 1 MGVFPAASAHALPLKYRQLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIEEDRL 60
Query: 649 IKAMDAVEHLLTDEERSRN 667
+ + VE LT EE RN
Sbjct: 61 LAEIKKVEDTLTPEEARRN 79
>gi|327409880|ref|YP_004347300.1| XRN1 5'-3' exoribonuclease [Lausannevirus]
gi|326785054|gb|AEA07188.1| XRN1 5'-3' exoribonuclease [Lausannevirus]
Length = 495
Score = 81.6 bits (200), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 140/372 (37%), Gaps = 118/372 (31%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP F +I +R+ ++ +++ Q DNLY+D +H C+
Sbjct: 11 MGVPGLFYWIQQRHSRYTKNIQKGQ-NTVDNLYVDAVCFVHTCA---------------- 53
Query: 61 FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGE 120
QDI+ Y G+ + + + +K KE+ E
Sbjct: 54 -QDIYGY-------------------------------GKNISLSDTFKDMTEKQKEQ-E 80
Query: 121 RLPTEKRFDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 180
+ + F K+ P K F++ DGVAP AK NQQR RRF K +
Sbjct: 81 LFRSVRNAIFRLTKYVTPTKKFYVVFDGVAPIAKQNQQRHRRFLGGKPS----------- 129
Query: 181 ERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSG 240
FD N IT GT F+ RL + + + ++ K+ L + S
Sbjct: 130 ------CGFDPNSITCGTEFLDRLQRYVE-----RGLSNFCQKEKFDL--------VFSS 170
Query: 241 HETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKF 300
GEGEHK + + R + HC Y D DL++L + SLLR++
Sbjct: 171 SSEAGEGEHKALAFAR------NNGNGESHCFYSPDGDLVLLTMALGFDKVSLLRQD--- 221
Query: 301 NTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLM 360
++ K+ L +S LS F + I D+V +
Sbjct: 222 ------------HIQQWKYLLTDIS-----------------GLSQEFQKDVPIKDFVFL 252
Query: 361 GFLIGNDFIPNL 372
L+GNDF+P L
Sbjct: 253 SCLLGNDFLPRL 264
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
Query: 529 QAECYIRAIQWNLHYYYNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQ-- 586
QA YIR W YY+ GC W Y HY P++SDIK H + + +P Q
Sbjct: 366 QAFDYIRGCIWVTVYYFRGCPDNGWSYKWHYPPFLSDIKK-EHFTGQKPFKQSVVPNQLL 424
Query: 587 QLLAVLPAASKELLPEPYQNLMTL-ENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDE 645
QLL VLP S +LLP ++ + + + E++P+E D GK +D+E V L+P +D
Sbjct: 425 QLLCVLPPHSMDLLPRRWRKYGGITKREELSEFFPKEVEIDYEGKFRDYENVPLLPHVD- 483
Query: 646 VKLIK 650
V LI+
Sbjct: 484 VALIQ 488
>gi|340055310|emb|CCC49623.1| putative 5'-3' exonuclease XRNC [Trypanosoma vivax Y486]
Length = 871
Score = 81.3 bits (199), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 110/266 (41%), Gaps = 29/266 (10%)
Query: 128 FDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEK 187
D I L+ P+ L ++A+DG++P K+ QQR RR R + +
Sbjct: 68 LDDIILRLVQPRSLVYLAVDGISPMGKLAQQRSRRRRRRHDNNFPSNHNRNV-------- 119
Query: 188 RFDSNCITPGTPFMCRLHQQLRYFVKLK---ITTDKL--WKDTLSLWVWKDVCVILSGHE 242
+DSN IT GTPFM L L ++ + I ++L ++ T D +
Sbjct: 120 EWDSNSITVGTPFMSTLTYALHFYCSSRAERINVERLRQYRSTAGGNAPGDTVPVPVTFV 179
Query: 243 T-----PGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLR-- 295
PGEGE KI D IR +S+P YNPN H + D D+ + L HEP +LR
Sbjct: 180 VDDVWRPGEGESKIADAIRRFRSQPSYNPNTSHVICSSDTDMTVCSLILHEPRMHVLRYV 239
Query: 296 ---EEVKFNTKSNKGGSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPF---- 348
E V S + + FF + ++L + +S
Sbjct: 240 YAAENVSHCDGSGSRHNHTGDSWASTFFSIFAFREELRIKLRLPPCNDDAEMSAEELEQR 299
Query: 349 --SIENIIDDWVLMGFLIGNDFIPNL 372
E + D V + L GNDF+P+L
Sbjct: 300 HQRFERALHDVVFVLQLFGNDFLPSL 325
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI 60
MGVP ++ R+ S + P+ D LY+D+NG+++ + + TE I
Sbjct: 1 MGVPLLLTWLKRRFA--SCFLPSNSSPDTDCLYIDVNGLVYQAAALVTSGEG--STEGDI 56
Query: 61 FQDIFHYI-----EILFRMIQPKKLFFMAIDGVAPRAKMNQQ 97
I + + +I+ R++QP+ L ++A+DG++P K+ QQ
Sbjct: 57 GTAITYRLFDLLDDIILRLVQPRSLVYLAVDGISPMGKLAQQ 98
>gi|261330307|emb|CBH13291.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei gambiense
DAL972]
Length = 960
Score = 80.1 bits (196), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 120/277 (43%), Gaps = 47/277 (16%)
Query: 128 FDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEK 187
D I L+ P+ L ++A+DG++P K+ + + + ++ ++ + T +
Sbjct: 159 LDDIVLRLVRPRSLVYLAVDGISPMGKL---------AQQRSRRRRRRRQDPHSHVRTTE 209
Query: 188 RFDSNCITPGTPFMCRLHQQLRYFVKLK---ITTDKLWKDTLSLWVWKDVC--------- 235
+DSN I+ GT FM L L ++ + I ++L ++ V KDV
Sbjct: 210 -WDSNSISVGTSFMSSLTDALHFYCASRAERINVERL-REYKQRDVGKDVASAGFPANEK 267
Query: 236 -------VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
+ PGEGE KI D IR +S+P+Y+PN H + D D+ + L HE
Sbjct: 268 AAPSLITFVSDNVWRPGEGESKIADAIRRFRSQPNYDPNTAHVICSSDTDVTVCSLILHE 327
Query: 289 PYFSLLREEVKFNTKSNKGGS---QIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLS 345
P +LR E + + KGG+ Q + + R+ L L +L+ S
Sbjct: 328 PNIHVLRYE-HVSASTAKGGNNNWQTYAGDSWASTFFSIYAFREELRL---RLRIEQTCS 383
Query: 346 FPFSIENI----------IDDWVLMGFLIGNDFIPNL 372
S E + + D V + L GNDF+P++
Sbjct: 384 NTMSAEELEKLNKQFEAALHDVVFVLLLFGNDFLPSV 420
Score = 49.7 bits (117), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 18/103 (17%)
Query: 1 MGVPKFFRYISERY-----PCLSEVVREYQIPEFDNLYLDMNGIIHNCSH---PNDNDPH 52
MGVP ++ R+ P S V D LY+D+NG+++ + DP
Sbjct: 93 MGVPLLLTWLRRRFAACFLPSNSNV-------SADCLYIDVNGLVYQAATLATSGGGDPA 145
Query: 53 FRITEKQIFQDIFHYIE-ILFRMIQPKKLFFMAIDGVAPRAKM 94
E I + +F ++ I+ R+++P+ L ++A+DG++P K+
Sbjct: 146 --DIEAAILRRLFDLLDDIVLRLVRPRSLVYLAVDGISPMGKL 186
>gi|71656489|ref|XP_816791.1| 5'-3' exonuclease XRNC [Trypanosoma cruzi strain CL Brener]
gi|70881942|gb|EAN94940.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 282
Score = 80.1 bits (196), Expect = 1e-11, Method: Composition-based stats.
Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 32/216 (14%)
Query: 129 DFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKR 188
D I L+ P+ L ++A+DG++P K+ QQR RR R + +
Sbjct: 68 DDIVLRLVRPRFLVYLAVDGISPMGKLAQQRSRRRRRSGGGSRGRNAVE----------- 116
Query: 189 FDSNCITPGTPFMCRLHQQLRYFVKLKITT-------DKLWKDTLSLWVWKDVCV----- 236
+DSN I+ GTPFM RL + L ++ + D+L + DV V
Sbjct: 117 WDSNSISVGTPFMSRLTEALHFYCASRAERINGERLRDELQQVARGNTTGGDVPVTPITF 176
Query: 237 ILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLRE 296
I+ PGEGE KI D IR +S+ Y+PN H + D D+ + L HEP +LR
Sbjct: 177 IVDDVWRPGEGESKIADAIRRFRSQSTYDPNTSHVICSSDTDVTVCSLILHEPRIHVLRY 236
Query: 297 EVKFNTKS---NKGG------SQIVTPEETKFFLLH 323
E + S ++GG +Q+ + FF +H
Sbjct: 237 ECSPSHHSGGASRGGDSGSWRNQVGDAWASTFFSIH 272
Score = 53.9 bits (128), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 1 MGVPKFFRYISERY-PCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRI-TEK 58
MGVP ++ R+ PC + P D LY+D+NG+++ + + +
Sbjct: 1 MGVPLLLTWLKRRFAPCF---LSSSSCPAADCLYIDVNGLVYQAAALATASEASAVDIDA 57
Query: 59 QIFQDIFHYIE-ILFRMIQPKKLFFMAIDGVAPRAKMNQQ 97
I + +F I+ I+ R+++P+ L ++A+DG++P K+ QQ
Sbjct: 58 AILRKLFDIIDDIVLRLVRPRFLVYLAVDGISPMGKLAQQ 97
>gi|283771378|gb|ADB28925.1| exonuclease XRN1 domain [Zea mays subsp. mays]
Length = 236
Score = 80.1 bits (196), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 46/229 (20%)
Query: 380 GALPLLYKVYQEVLPTLDGYINE--------GGYLNLKRFEKFLTKLASFDFEQFREKYA 431
GA+ LL +VY+ + GYI G YL + R E F +L+ ++ + F ++Y
Sbjct: 1 GAVDLLIEVYKTTFNKMGGYITNTDKVKDKYGAYLEVSRLETFFHELSMYEDKIFLKRY- 59
Query: 432 DIQYLEGKMGKKFSDVFHK---EKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEYY 488
D++ + + + + ++ + + E+ L L+ ++ YD +
Sbjct: 60 DLK--QDSLLETYHEMLREAPESERPELRQKLDDLLFNEENPYDSIRLGLPG-------- 109
Query: 489 YSDEDEEWRTNFFSE-FGQHKTDYYHYKLDYAKVTNEVLR---DQAECYIRAIQWNLHYY 544
W++ FF E FG AK ++E+ + D A+ Y+ + W L Y
Sbjct: 110 -------WKSRFFREHFG-------------AKTSSEIGKLQNDMAQKYLEGLCWVLQCY 149
Query: 545 YNGCVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLP 593
+ SWSWYYP + AP++SD+K S + + + + +P PF QL+AVLP
Sbjct: 150 FADVPSWSWYYPFYVAPFVSDLKGLSRIEISFTVDKPLRPFDQLMAVLP 198
>gi|72392625|ref|XP_847113.1| 5'-3' exonuclease XRNC [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176006|gb|AAX70128.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei]
gi|70803143|gb|AAZ13047.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 868
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 119/277 (42%), Gaps = 47/277 (16%)
Query: 128 FDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEK 187
D I L+ P+ L ++A+DG++P K+ + + + ++ ++ + T +
Sbjct: 67 LDDIVLRLVRPRSLVYLAVDGISPMGKL---------AQQRSRRRRRRRQDPHSHVRTTE 117
Query: 188 RFDSNCITPGTPFMCRLHQQLRYFVKLK---ITTDKLWKDTLSLWVWKDVC--------- 235
+DSN I+ GT FM L L ++ + I ++L ++ V KDV
Sbjct: 118 -WDSNSISVGTSFMSSLTDALHFYCASRAERINVERL-REYKQRDVGKDVASAGFPANEK 175
Query: 236 -------VILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
+ PGEGE KI D IR +S+P Y+PN H + D D+ + L HE
Sbjct: 176 AAPSLITFVSDNVWRPGEGESKIADAIRRFRSQPSYDPNTAHVICSSDTDVTVCSLILHE 235
Query: 289 PYFSLLREEVKFNTKSNKGGS---QIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLS 345
P +LR E + + KGG+ Q + + R+ L L +L+ S
Sbjct: 236 PNIHVLRYE-HVSASTAKGGNNNWQTYAGDSWASTFFSIYAFREELRL---RLRIEQTRS 291
Query: 346 FPFSIENI----------IDDWVLMGFLIGNDFIPNL 372
S E + + D V + L GNDF+P++
Sbjct: 292 NTMSAEELEKLNKQFEAALHDVVFVLLLFGNDFLPSV 328
Score = 50.8 bits (120), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 18/103 (17%)
Query: 1 MGVPKFFRYISERY-----PCLSEVVREYQIPEFDNLYLDMNGIIHNCSH---PNDNDPH 52
MGVP ++ R+ P S V D LY+D+NG+++ + DP
Sbjct: 1 MGVPLLLTWLRRRFAACFLPSNSNV-------SADCLYIDVNGLVYQAATLATSGGGDPA 53
Query: 53 FRITEKQIFQDIFHYIE-ILFRMIQPKKLFFMAIDGVAPRAKM 94
E I + +F ++ I+ R+++P+ L ++A+DG++P K+
Sbjct: 54 --DIEAAILRRLFDLLDDIVLRLVRPRSLVYLAVDGISPMGKL 94
>gi|398393908|ref|XP_003850413.1| hypothetical protein MYCGRDRAFT_74677, partial [Zymoseptoria tritici
IPO323]
gi|339470291|gb|EGP85389.1| hypothetical protein MYCGRDRAFT_74677 [Zymoseptoria tritici IPO323]
Length = 335
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 146/336 (43%), Gaps = 36/336 (10%)
Query: 733 FPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIFINYPH 792
FP+L+ + T + V VFQQ SRNES I+ + + A LGK++ I YP
Sbjct: 14 FPSLRTLPHTANLGFHGVSVFQQESRNESAIVTLSDGEEKNTTAHAKTRLGKSVHIGYPF 73
Query: 793 LIEIRVQAVATKDSRISF----------DKN--SGPVFERAAKDMQDAFQLSKKSITDGY 840
L E RV +V D ++ D+N P R +D + K + + +
Sbjct: 74 LQEGRVCSVT--DEMFTYRLANPELPPTDQNIIQAPHEYRGVEDWK-----KKANRIEAH 126
Query: 841 YTK-LGVDIGNTEVLVYGQP-VESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQA 898
Y+K LG+ IG E LV +P V RK G K I YA Q+ V +
Sbjct: 127 YSKRLGIIIGTVESLVQIEPLVGLRKTETGATIKEYAPMQGIEP--DYATQTVVDEVISE 184
Query: 899 RESLEYKT---IDEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQ----E 951
+ K I E F G + F L + YG V + + + K V Q E
Sbjct: 185 DQRFLEKAALPIQEEFPVGTRAFFLGDMAYGRPLEVTNHIAGGDGADKAEIWVSQLAVRE 244
Query: 952 PDLSDLVHLQDDTVYNYLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNI 1011
P+ + ++ Y PSY VA +L + PL+LS+ T + + S + N+
Sbjct: 245 PEFGIDIARSAESRNPYTPSYVVARQLQLHPLVLSKLTSAFNVTSSGLKLNLGL----NL 300
Query: 1012 KFSRKNEEVVGFTRRDETTKKWFYTEQVVTLIKNYM 1047
KF K +V+G++R+ + W Y+ + V L++ YM
Sbjct: 301 KFEAKKLKVLGYSRK--SANGWEYSPKAVDLLRQYM 334
>gi|342182575|emb|CCC92054.1| putative exoribonuclease 2 [Trypanosoma congolense IL3000]
Length = 867
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 119/273 (43%), Gaps = 43/273 (15%)
Query: 128 FDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEK 187
D I LK P+ L ++A+DGV+P K++QQR + + ++ G
Sbjct: 67 LDDIVLKLVRPRSLVYLAVDGVSPMGKLSQQR----SRRRRRRRQDPHSQAHG------T 116
Query: 188 RFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCV----------- 236
+DSN I+ GT FM L L ++ + + + + V +
Sbjct: 117 EWDSNSISVGTSFMSSLANALHFYCVSRTEQVNVERLREHRRRSRPVDIGSSLTEEQPPL 176
Query: 237 ---ILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSL 293
++ G PGEGE KI D IR +S+P+Y+PN H + D D+ + L HEP+ +
Sbjct: 177 ITFVVDGVWRPGEGECKITDAIRRFRSQPNYDPNTSHVICSSDTDMTVCSLILHEPHIHV 236
Query: 294 LREEVKFNTKSNKGGSQIVTPEETK---------FFLLHL--SLMRDYLELEF---GKLK 339
LR E + +G S+ V+ T+ FF ++ +R L LE
Sbjct: 237 LRYE-----HAPRGTSKGVSDGWTRSAGDSWASTFFSINAFREELRSRLRLERCANNTDT 291
Query: 340 EPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNL 372
GV E+ + D V + L GNDF+P++
Sbjct: 292 AGGVERCDRLFESALHDVVFVLLLFGNDFLPSV 324
Score = 50.4 bits (119), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSH-PNDNDPHFRITEKQ 59
MGVP ++ R+ S + + D LY+D+NG+++ + +
Sbjct: 1 MGVPLLLTWLRRRFS--SCFLPSNTVLSTDCLYIDVNGLVYQAAALVTSGGVDCTDIDAA 58
Query: 60 IFQDIFHYIE-ILFRMIQPKKLFFMAIDGVAPRAKM 94
I Q +F ++ I+ ++++P+ L ++A+DGV+P K+
Sbjct: 59 IIQRVFDLLDDIVLKLVRPRSLVYLAVDGVSPMGKL 94
>gi|339898255|ref|XP_003392512.1| putative 5'-3' exonuclease XRNC [Leishmania infantum JPCM5]
gi|321399477|emb|CBZ08676.1| putative 5'-3' exonuclease XRNC [Leishmania infantum JPCM5]
Length = 1068
Score = 78.2 bits (191), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 128 FDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLP--T 185
D + + PK L ++A+DGV+P KM+QQR RR R A+ + +
Sbjct: 78 LDDLVMNLVQPKALVYIAVDGVSPLGKMSQQRARRRRGARRQPSASSSSPSRHHEPAGNI 137
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFV--------------------KLKITTDKLWKDT 225
+DSNCI+ GT FM ++ + L ++ K + D D+
Sbjct: 138 NDLWDSNCISVGTRFMAKVTEALHFYAVSRTERINAKRLREERVRIDKADASVDSAAGDS 197
Query: 226 LSL-WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGL 284
+V+ + +I+ PGEGE+KI ++IR +++ P Y PN H + D D+ + L
Sbjct: 198 AGAPYVFPFLSIIVDDVLRPGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDVTVTSL 257
Query: 285 CTHEPYFSLLREE 297
HEP +LR E
Sbjct: 258 ILHEPRIHVLRYE 270
Score = 49.3 bits (116), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 1 MGVPKFFRYISERYP-CL---SEVVREYQIPEFDNLYLDMNGIIH------NCSHPNDND 50
MGVP ++ +R+ C V +Y DNL++D+N ++ +H +
Sbjct: 1 MGVPLLLTWLRKRFADCFMPADSAVTDYIRESTDNLFIDLNSFLYQAATIITATHRSLRF 60
Query: 51 PHFRITEKQIFQDIFHYIE-ILFRMIQPKKLFFMAIDGVAPRAKMN 95
E + + +F ++ ++ ++QPK L ++A+DGV+P KM+
Sbjct: 61 NSVDEVEDVVLRKLFDLLDDLVMNLVQPKALVYIAVDGVSPLGKMS 106
>gi|398015544|ref|XP_003860961.1| 5'-3' exonuclease XRNC, putative [Leishmania donovani]
gi|322499185|emb|CBZ34256.1| 5'-3' exonuclease XRNC, putative [Leishmania donovani]
Length = 1068
Score = 78.2 bits (191), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 128 FDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLP--T 185
D + + PK L ++A+DGV+P KM+QQR RR R A+ + +
Sbjct: 78 LDDLVMNLVQPKALVYIAVDGVSPLGKMSQQRARRRRGARRQPSASSSSPSRHHEPAGNI 137
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFV--------------------KLKITTDKLWKDT 225
+DSNCI+ GT FM ++ + L ++ K + D D+
Sbjct: 138 NDLWDSNCISVGTRFMAKVTEALHFYAVSRTERINAKRLREERVRIDKADASVDSAAGDS 197
Query: 226 LSL-WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGL 284
+V+ + +I+ PGEGE+KI ++IR +++ P Y PN H + D D+ + L
Sbjct: 198 AGAPYVFPFLSIIVDDVLRPGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDVTVTSL 257
Query: 285 CTHEPYFSLLREE 297
HEP +LR E
Sbjct: 258 ILHEPRIHVLRYE 270
Score = 49.7 bits (117), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 1 MGVPKFFRYISERYP-CL---SEVVREYQIPEFDNLYLDMNGIIH------NCSHPNDND 50
MGVP ++ +R+ C V +Y DNL++D+N ++ +H +
Sbjct: 1 MGVPLLLTWLRKRFADCFMPADSAVTDYIRESTDNLFIDLNSFLYQAATIITATHRSLRF 60
Query: 51 PHFRITEKQIFQDIFHYIE-ILFRMIQPKKLFFMAIDGVAPRAKMN 95
E + + +F ++ ++ ++QPK L ++A+DGV+P KM+
Sbjct: 61 DSVDEVEDVVLRKLFDLLDDLVMNLVQPKALVYIAVDGVSPLGKMS 106
>gi|449017059|dbj|BAM80461.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 695
Score = 78.2 bits (191), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 23/157 (14%)
Query: 133 LKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDSN 192
L+ C PKK F+A DG AP AK+ Q+ RR VLE + + + D
Sbjct: 66 LRLCVPKKSVFIAFDGPAPLAKLVTQKRRR--------VLESRKLHRTRKRKRRCGVDVL 117
Query: 193 CITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKIM 252
++PGT M Q + ++V ++ + + ++++V ++SG PGEGE KI+
Sbjct: 118 SLSPGTELMQLTLQAVEFYVCSRLQSKRH--------LYQNVRFVVSGPTVPGEGEIKII 169
Query: 253 DYI-RYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHE 288
DYI RY+ +P + G DADL++LGL T +
Sbjct: 170 DYIHRYV------DPQHSVVVIGSDADLVVLGLATQK 200
Score = 60.8 bits (146), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPE-FDNLYLDMNGIIHNCSHPNDNDPHFRITEKQ 59
MG+ F R+ E +P V PE FD++ D+N +IH + N Q
Sbjct: 1 MGIAGFQRWYLENFPSTVVTVTGESAPEHFDHVLFDLNQLIHLAARVARN-------RDQ 53
Query: 60 IFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKG 119
F +F +++ + R+ PKK F+A DG AP AK+ Q+ RR +++ ++ + G
Sbjct: 54 FFIRLFRWLDNILRLCVPKKSVFIAFDGPAPLAKLVTQKRRRVLESRKLHRTRKRKRRCG 113
>gi|157869656|ref|XP_001683379.1| putative 5'-3' exonuclease XRNC [Leishmania major strain Friedlin]
gi|68126444|emb|CAJ04205.1| putative 5'-3' exonuclease XRNC [Leishmania major strain Friedlin]
Length = 1068
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 31/197 (15%)
Query: 128 FDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFR------SAKEAEVLEQKAKEKGE 181
D + + PK L ++A+DGV+P KM+QQR RR R SA +
Sbjct: 78 LDDLVMNLVQPKALVYIAVDGVSPLGKMSQQRARRRRGARRQPSASPSSPFHHHEPAGN- 136
Query: 182 RLPTEKRFDSNCITPGTPFMCRLHQQLRYFV--------------------KLKITTDKL 221
+DSNCI+ GT FM ++ + L ++ K + D
Sbjct: 137 ---INDLWDSNCISVGTRFMAKVTEALHFYAVSRTERINAKRLREEQVRIDKADASVDSA 193
Query: 222 WKDTLSL-WVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLI 280
D+ +V+ + +I+ PGEGE+KI ++IR +++ P Y PN H + D D+
Sbjct: 194 ASDSAGAPYVFPFISIIVDDVLRPGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDVT 253
Query: 281 MLGLCTHEPYFSLLREE 297
+ L HEP +LR E
Sbjct: 254 VTSLILHEPRIHVLRYE 270
Score = 50.1 bits (118), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 1 MGVPKFFRYISERYP-CL---SEVVREYQIPEFDNLYLDMNGIIH------NCSHPNDND 50
MGVP ++ +R+ C V +Y DNL++D+N ++ +H +
Sbjct: 1 MGVPLLLTWLRKRFADCFMPADSAVTDYIRESTDNLFIDLNSFLYQAATIITATHRSLRF 60
Query: 51 PHFRITEKQIFQDIFHYIE-ILFRMIQPKKLFFMAIDGVAPRAKMN 95
E + + +F ++ ++ ++QPK L ++A+DGV+P KM+
Sbjct: 61 NSVDEVENAVLRKLFDLLDDLVMNLVQPKALVYIAVDGVSPLGKMS 106
>gi|343469292|emb|CCD17697.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 415
Score = 77.4 bits (189), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 54/259 (20%)
Query: 353 IIDDWVLMGFLIGNDFIPNLPDLHIINGALPLLYKVY-QEVLPTLDGYINEGGY-LNLKR 410
IIDD +++ L+GNDF+P+ P + AL L ++Y VLP G++ G + +NL++
Sbjct: 163 IIDDIIVLSMLLGNDFLPHSPSVLCGESALDNLLELYVSSVLPY--GFLTSGSHEINLEQ 220
Query: 411 FEKFLTKLASFDFEQFREKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDD 470
+ A+ + +FR Q L+G S + ++ A +
Sbjct: 221 LRRLFESCATIEAVKFRR----FQLLKG-------------TSAPVGAEVGATVNGG--- 260
Query: 471 YDDGTEEVLNYANYEEYYYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQA 530
++ A+ + +S D+ WR + G + VL+
Sbjct: 261 ------RIMTVADAAKPLHSAIDDGWRDTYLGSTG---------------LKENVLK-AC 298
Query: 531 ECYIRAIQWNLHYYYNGCVS--WSWYYPHHYAPYISDI------KDFSHLNLKYEMGEPF 582
E Y+ I++ YY + VS W+WYYP ++AP D+ K+ + + + P
Sbjct: 299 EKYVEGIRFVWRYYTDTVVSCDWAWYYPFYHAPLSHDVAAYLNGKNIAQITSPSVVTSPP 358
Query: 583 LPFQQLLAVLPAASKELLP 601
+ QLL+VLP S LLP
Sbjct: 359 HIYVQLLSVLPPTSHALLP 377
>gi|401422387|ref|XP_003875681.1| putative 5'-3' exonuclease XRNC [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491920|emb|CBZ27193.1| putative 5'-3' exonuclease XRNC [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1070
Score = 77.0 bits (188), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 128 FDFITLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLP--T 185
D + + PK L ++A+DGV+P KM+QQR RR R A+ + +
Sbjct: 78 LDDLVMNLVQPKALVYIAVDGVSPLGKMSQQRARRRRGARRQSSASPSSSFRHHEPAGNI 137
Query: 186 EKRFDSNCITPGTPFMCRLHQQLRYFV--------------------KLKITTDKLWKD- 224
+DSNCI+ GT FM ++ + L ++ K + D D
Sbjct: 138 NDLWDSNCISVGTRFMAKVTEALHFYAVSRTERINAKRLREERVRIDKADASVDSAAGDS 197
Query: 225 TLSLWVWKDVCVILSGHETPGEGEHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGL 284
T +V+ + +I+ PGEGE+KI ++IR +++ P Y PN H + D D+ + L
Sbjct: 198 TGESYVFPFISIIVDDVLRPGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDVTVTSL 257
Query: 285 CTHEPYFSLLREE 297
HEP +LR E
Sbjct: 258 ILHEPRIHVLRYE 270
Score = 48.9 bits (115), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 1 MGVPKFFRYISERYP-CL---SEVVREYQIPEFDNLYLDMNGIIH------NCSHPNDND 50
MGVP ++ +R+ C V +Y DNL++D+N ++ +H
Sbjct: 1 MGVPLLLTWLRKRFADCFMPADSAVTDYIRRSTDNLFIDLNSFLYQAATIITATHRTHRF 60
Query: 51 PHFRITEKQIFQDIFHYIE-ILFRMIQPKKLFFMAIDGVAPRAKM 94
E + + +F ++ ++ ++QPK L ++A+DGV+P KM
Sbjct: 61 HSVDEVEDVVLRKLFDLLDDLVMNLVQPKALVYIAVDGVSPLGKM 105
>gi|402576527|gb|EJW70485.1| hypothetical protein WUBG_18607 [Wuchereria bancrofti]
Length = 81
Score = 76.3 bits (186), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 7/71 (9%)
Query: 64 IFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-EVLEQKA------K 116
IF YI+ LF +++P+KL +MAIDGVAPRAKMNQQR RRFR++KEA E +EQ A +
Sbjct: 3 IFEYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKEAIEKVEQIAEIRSRLE 62
Query: 117 EKGERLPTEKR 127
+G LP EK+
Sbjct: 63 SEGYPLPPEKK 73
Score = 64.7 bits (156), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 48/70 (68%), Gaps = 9/70 (12%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA-EVLEQKA------KE 178
F++I F P+KL +MAIDGVAPRAKMNQQR RRFR++KEA E +EQ A +
Sbjct: 4 FEYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKEAIEKVEQIAEIRSRLES 63
Query: 179 KGERLPTEKR 188
+G LP EK+
Sbjct: 64 EGYPLPPEKK 73
>gi|167377817|ref|XP_001734556.1| 5'->3' exoribonuclease [Entamoeba dispar SAW760]
gi|165903893|gb|EDR29284.1| 5'->3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 201
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query: 543 YYYNGCVSWSWYYPHHYAPYISDIKDFSHLN--LKYEMGEPFLPFQQLLAVLPAASKELL 600
YY+N SW WYY HYAP+ D + + N + + P LP +QLL+VLP S +
Sbjct: 4 YYFNKLPSWRWYYKFHYAPFALDFALYLNENDSISFSSDTPILPLEQLLSVLPPHSFNNI 63
Query: 601 PEPYQNLMTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLT 660
P + + NSPIL Y+ F D+NG+ + ++ + L+P ID +D + +
Sbjct: 64 PSKLAHFVLSPNSPILHYFNTSFKIDINGENKLYKGIPLLPNID-------IDLLHSFVF 116
Query: 661 DEERS 665
D E S
Sbjct: 117 DLELS 121
>gi|238613508|ref|XP_002398460.1| hypothetical protein MPER_00943 [Moniliophthora perniciosa FA553]
gi|215475037|gb|EEB99390.1| hypothetical protein MPER_00943 [Moniliophthora perniciosa FA553]
Length = 98
Score = 75.9 bits (185), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/67 (56%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 28 EFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFMAIDG 87
EFD LYLDMNGI+H C+HP + P TE+ + ++F Y E + M++P+KL FMAIDG
Sbjct: 34 EFDCLYLDMNGIVHPCTHP-EGKPAPE-TEEDMMVEVFKYTERVVNMVRPRKLLFMAIDG 91
Query: 88 VAPRAKM 94
VAPRAKM
Sbjct: 92 VAPRAKM 98
>gi|384246301|gb|EIE19792.1| hypothetical protein COCSUDRAFT_58521 [Coccomyxa subellipsoidea
C-169]
Length = 852
Score = 75.5 bits (184), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 24/155 (15%)
Query: 132 TLKFCFPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEKGERLPTEKRFDS 191
TL+ P+K A+DG AP AK+ QR RR + A QK + G RL S
Sbjct: 60 TLRLVEPQKSVVFALDGPAPLAKLLTQRLRRKKEA-------QKEAKSGPRL-----LSS 107
Query: 192 NCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDTLSLWVWKDVCVILSGHETPGEGEHKI 251
+TPGTP M + + L Y++ ++ T W+ + LSG GEGE KI
Sbjct: 108 LGLTPGTPLMAMIQESLTYYICRRLQTS----------AWQHLHFELSGATVKGEGEVKI 157
Query: 252 MDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCT 286
+ R ++ D P H + D+D++++ L T
Sbjct: 158 LS--RLLRPWADVQPEDTHVVIANDSDVVLMALVT 190
Score = 50.1 bits (118), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 22/124 (17%)
Query: 1 MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHN-CSHPNDNDPHFRITEKQ 59
MGV F + +++P V+ + +D+LY+DM +H ND D HF
Sbjct: 1 MGVKGFNTWFRKQFPGAYVGVKRH----YDHLYIDMASYLHEELRRANDVD-HF------ 49
Query: 60 IFQDIFHY-IEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEVLEQKAKEK 118
+ H ++ R+++P+K A+DG AP AK+ QR RR + A QK +
Sbjct: 50 --HKLLHARLDKTLRLVEPQKSVVFALDGPAPLAKLLTQRLRRKKEA-------QKEAKS 100
Query: 119 GERL 122
G RL
Sbjct: 101 GPRL 104
>gi|321444979|gb|EFX60557.1| hypothetical protein DAPPUDRAFT_19557 [Daphnia pulex]
Length = 74
Score = 75.5 bits (184), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 9/79 (11%)
Query: 28 EFDNLYLDMNGIIHNCSHP----NDNDPHFRITEKQIFQDIFHYIEILFRMIQPKKLFFM 83
E+DNLY+D+N I+HNC N +D E++I + +F I+ +F +++P+KL ++
Sbjct: 1 EYDNLYIDLNEIVHNCVRAARFHNADD-----RERRIMEILFEKIDQIFSIVRPRKLLYV 55
Query: 84 AIDGVAPRAKMNQQRGRRF 102
A+DGVAPRAK QQR RRF
Sbjct: 56 ALDGVAPRAKRTQQRIRRF 74
Score = 43.5 bits (101), Expect = 1.3, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 120 ERLPTEKRFDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRF 163
ER E F+ I F P+KL ++A+DGVAPRAK QQR RRF
Sbjct: 29 ERRIMEILFEKIDQIFSIVRPRKLLYVALDGVAPRAKRTQQRIRRF 74
>gi|356533625|ref|XP_003535362.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 351
Score = 74.3 bits (181), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 43/53 (81%)
Query: 56 TEKQIFQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEA 108
T +F+ IF YI+ L+ +++P+KL ++AIDGVAPRAKMNQQR RRFR+AK+
Sbjct: 125 TYDDVFKSIFDYIDHLYSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFRTAKDV 177
Score = 73.9 bits (180), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 66/114 (57%), Gaps = 15/114 (13%)
Query: 275 LDADLIMLGLCTHEPYFSLLREEVKF------NTKSNKGGSQIVTPEET-----KFFLLH 323
+DADLIML L THE +FS+LRE+ F + ++ TP+++ K+ L+
Sbjct: 219 MDADLIMLSLATHEVHFSVLREDKCFLCGQVGHFAADCQAEDFDTPDDSSIHKKKYEFLN 278
Query: 324 LSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGNDFIPNLPDLHI 377
+ ++R+YL+ E P F IE I+DD+V + F +GNDF+P++P L I
Sbjct: 279 IWVLREYLQFELEIPNPP----FEIDIERIVDDFVFLCFFVGNDFLPHMPTLEI 328
Score = 71.2 bits (173), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 12/86 (13%)
Query: 128 FDFITLKFCF--PKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEV-------LEQKAKE 178
FD+I + P+KL ++AIDGVAPRAKMNQQR RRFR+AK+ L +K
Sbjct: 134 FDYIDHLYSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFRTAKDVAEAEAEEERLRKKFMS 193
Query: 179 KGERLPTEKR---FDSNCITPGTPFM 201
+G+ L ++ + DSN ITPGT FM
Sbjct: 194 EGKVLSSKDKPETSDSNVITPGTQFM 219
>gi|323456483|gb|EGB12350.1| hypothetical protein AURANDRAFT_17211, partial [Aureococcus
anophagefferens]
Length = 99
Score = 74.3 bits (181), Expect = 7e-10, Method: Composition-based stats.
Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 558 HYAPYISDIKDFSHLNL----KYEMGEPFLPFQQLLAVLPAASKELLPEPYQNLMTLENS 613
HYAP+ D+ ++ L K GEPF P QLLAV+P S LPE + +M L+
Sbjct: 1 HYAPFACDLAAYAPLCPPFWDKKAAGEPFKPLAQLLAVIPPGSAHCLPEACRLVMGLDRG 60
Query: 614 PILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMD 653
L +P + D NG+K WE V L+PF+DE KL +D
Sbjct: 61 LEL-MFPTKIKMDPNGRKHQWEWVALLPFLDERKLTTVID 99
>gi|398393910|ref|XP_003850414.1| hypothetical protein MYCGRDRAFT_74675 [Zymoseptoria tritici IPO323]
gi|339470292|gb|EGP85390.1| hypothetical protein MYCGRDRAFT_74675 [Zymoseptoria tritici IPO323]
Length = 364
Score = 73.9 bits (180), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 25/192 (13%)
Query: 1047 MKQFPEVFGFLKDHSSDDIYLRDDVF---PHQGEQRVAQIVSWLKEQPHAKAEVRPCGAA 1103
M +FPE + + + D + D F P + + ++ +I WLK E P A
Sbjct: 1 MIKFPEFIARIAANPTGDAW-EDTAFYPDPQEAKLKMKEIGQWLKSVETKSFEKVPLEAE 59
Query: 1104 VVDAKVVSLIEHAVDTCEKVEKQITLFVKPNK----LYIPKPTLDKLCPDPDTK-----F 1154
+D V IE A D Q T +P K +P+ L K D + + F
Sbjct: 60 QLDGDTVMAIEQAAD-------QNTAAAQPTKGKKIAGVPRVALLKPA-DAEQRTQNQNF 111
Query: 1155 KLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKI--RCSESRG 1212
KL RVV + + VP+ RGT++G+ Q T+ + + D+VFD F G + RCS RG
Sbjct: 112 KLGHRVVYVLETGRVPVALRGTVVGMTQ--TTRNTLLDIVFDATFMSGTSLNGRCSPFRG 169
Query: 1213 YRMPAQAMINLS 1224
+P+ A++N++
Sbjct: 170 STVPSNAVLNIT 181
>gi|303285350|ref|XP_003061965.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456376|gb|EEH53677.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 762
Score = 72.8 bits (177), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 115/267 (43%), Gaps = 21/267 (7%)
Query: 973 TVASKLSISPLLLSRFTGSIFIIDSTEEGA-KRHNIGLNIKFSRKNEEVVGFTRRDETTK 1031
VA KL ++P LS+ TG ++I + + G R ++GLN+K K V +TR +
Sbjct: 140 AVARKLGLNPRALSQLTGPLWIAPTKDCGRFDRVDVGLNLKSGNKGLCVSDYTRPQKEGN 199
Query: 1032 KWFYTEQVVTLIKNYMKQFPEVFGFLK---DHSSDDIYLRDDVFPHQGE----QRVAQIV 1084
W Y++ + L++ Y + VF + D+ + + L DD H E + +
Sbjct: 200 GWEYSQHAIKLMQEYKAKHGWVFNAIMADPDNGFEGLLL-DDALKHVAEPSRLGMLKDLK 258
Query: 1085 SWLKEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQ---ITL-FVKPNKLYIPK 1140
+WLK P A+ + + V + + + A E + I L V P L P
Sbjct: 259 AWLKATPAARKPLVSKFSKVAAEEAIRALYAATGAREVAGGRPPPIALESVSPLALMQPV 318
Query: 1141 PTLDKLCPDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFP 1200
+ L F L DRV + D G RG ++ V GE + +V+FD F
Sbjct: 319 RAGEILDLYAGGDFDLGDRVAMVGDSGAPAFGTRGYVV-AVHGEAA-----EVMFDVDFV 372
Query: 1201 HGVKIRCS--ESRGYRMPAQAMINLSY 1225
+ + E RG +P ++NLS+
Sbjct: 373 GATDLHGALPERRGALLPTAQLVNLSH 399
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,932,587,075
Number of Sequences: 23463169
Number of extensions: 1390318323
Number of successful extensions: 5049463
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 5309
Number of HSP's that attempted gapping in prelim test: 4951815
Number of HSP's gapped (non-prelim): 65056
length of query: 1891
length of database: 8,064,228,071
effective HSP length: 158
effective length of query: 1733
effective length of database: 8,652,014,665
effective search space: 14993941414445
effective search space used: 14993941414445
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 85 (37.4 bits)