Query psy14281
Match_columns 171
No_of_seqs 191 out of 1472
Neff 8.7
Searched_HMMs 46136
Date Fri Aug 16 15:53:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14281.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14281hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PHA02713 hypothetical protein; 99.9 1E-23 2.2E-28 180.9 9.0 115 53-169 3-121 (557)
2 KOG4441|consensus 99.9 3E-23 6.6E-28 178.1 8.9 117 53-169 14-132 (571)
3 PF00651 BTB: BTB/POZ domain; 99.9 4.1E-22 8.9E-27 136.5 7.8 104 66-169 1-109 (111)
4 PHA02790 Kelch-like protein; P 99.8 5.2E-21 1.1E-25 161.8 7.7 104 64-169 11-118 (480)
5 PHA03098 kelch-like protein; P 99.8 1.8E-20 3.8E-25 160.2 6.4 96 72-169 6-103 (534)
6 smart00225 BTB Broad-Complex, 99.8 4.5E-19 9.7E-24 115.8 7.1 88 77-164 1-90 (90)
7 KOG4350|consensus 99.7 1.5E-18 3.3E-23 139.8 4.7 111 57-167 26-141 (620)
8 KOG4591|consensus 99.6 3.2E-16 6.9E-21 115.9 4.8 111 56-168 47-163 (280)
9 KOG2075|consensus 99.6 2.4E-15 5.3E-20 123.3 6.8 117 53-169 92-215 (521)
10 KOG4682|consensus 99.2 4.3E-11 9.4E-16 96.8 5.9 100 65-165 59-164 (488)
11 KOG0783|consensus 99.0 1.6E-09 3.5E-14 94.5 7.5 107 58-164 541-682 (1267)
12 KOG0783|consensus 98.9 5.4E-10 1.2E-14 97.3 3.1 97 73-169 708-813 (1267)
13 KOG2838|consensus 98.7 4.2E-08 9.2E-13 76.3 5.6 101 58-158 113-220 (401)
14 KOG2716|consensus 98.7 8.2E-08 1.8E-12 73.5 7.0 91 78-169 7-103 (230)
15 PF02214 BTB_2: BTB/POZ domain 98.3 2.6E-06 5.6E-11 56.6 6.5 85 78-163 1-94 (94)
16 KOG2838|consensus 98.2 5.6E-07 1.2E-11 70.2 1.2 108 58-165 218-382 (401)
17 smart00512 Skp1 Found in Skp1 97.5 0.00022 4.7E-09 48.3 5.2 78 78-156 4-104 (104)
18 KOG3473|consensus 97.5 0.00043 9.2E-09 45.9 6.0 78 78-156 19-112 (112)
19 KOG2714|consensus 97.3 0.00085 1.8E-08 55.5 7.0 88 78-165 13-109 (465)
20 PF03931 Skp1_POZ: Skp1 family 97.2 0.0027 5.9E-08 38.8 6.8 56 78-134 3-59 (62)
21 KOG0511|consensus 97.2 0.00013 2.9E-09 59.4 1.0 87 75-161 149-236 (516)
22 PF11822 DUF3342: Domain of un 97.0 0.00042 9.1E-09 55.5 2.5 83 85-167 14-100 (317)
23 KOG0511|consensus 96.9 0.00041 8.9E-09 56.7 1.3 72 85-157 301-378 (516)
24 KOG1665|consensus 96.6 0.0073 1.6E-07 46.3 6.4 87 78-165 11-105 (302)
25 KOG1724|consensus 96.2 0.011 2.4E-07 43.2 4.9 82 83-165 13-121 (162)
26 KOG1987|consensus 95.9 0.0026 5.7E-08 50.6 0.5 84 84-167 109-197 (297)
27 COG5201 SKP1 SCF ubiquitin lig 95.8 0.023 4.9E-07 39.8 4.9 86 78-164 4-115 (158)
28 KOG2715|consensus 95.4 0.042 9E-07 40.3 5.0 89 77-165 22-116 (210)
29 KOG3840|consensus 93.0 0.35 7.7E-06 38.9 6.2 83 75-157 95-185 (438)
30 KOG2723|consensus 89.7 1.3 2.7E-05 34.1 6.0 91 74-165 6-104 (221)
31 KOG2832|consensus 87.4 0.13 2.8E-06 42.2 -0.7 41 1-41 328-368 (393)
32 PF01466 Skp1: Skp1 family, di 78.7 0.84 1.8E-05 29.0 0.5 27 140-166 12-38 (78)
33 PF09593 Pathogen_betaC1: Beta 61.4 48 0.001 22.9 6.1 74 83-157 20-96 (117)
34 KOG3713|consensus 55.7 77 0.0017 27.4 7.6 80 77-158 32-126 (477)
35 KOG1778|consensus 51.4 3 6.4E-05 34.0 -1.3 57 79-135 30-88 (319)
36 PHA02790 Kelch-like protein; P 31.3 57 0.0012 27.9 3.4 31 138-168 119-149 (480)
37 KOG3863|consensus 26.9 8.1 0.00018 34.1 -2.5 38 66-108 5-42 (604)
38 KOG4350|consensus 24.1 38 0.00083 28.8 1.0 69 98-168 93-174 (620)
39 PF10905 DUF2695: Protein of u 22.9 97 0.0021 18.2 2.3 21 63-83 33-53 (53)
40 KOG3342|consensus 22.7 44 0.00095 24.4 0.9 17 78-94 84-101 (180)
41 cd00758 MoCF_BD MoCF_BD: molyb 21.9 1.6E+02 0.0035 20.2 3.8 71 56-133 42-130 (133)
42 PHA03098 kelch-like protein; P 20.9 63 0.0014 27.8 1.8 31 138-168 104-134 (534)
43 PF06404 PSK: Phytosulfokine p 20.8 35 0.00076 21.9 0.1 13 124-136 66-78 (81)
No 1
>PHA02713 hypothetical protein; Provisional
Probab=99.90 E-value=1e-23 Score=180.94 Aligned_cols=115 Identities=26% Similarity=0.373 Sum_probs=105.9
Q ss_pred eeecccHHHHHHHHHHHhhCCCceeEEEEeC-CEEEEeehhhhcccChhHHhccccC--CC-CCceEEeCCCCHHHHHHH
Q psy14281 53 LKWNDFQSNMVTSFKHLRNDNSFTDVTLACE-GQTCKAHKMVLSACSPYFKTLLEEN--PS-KHPIIILKDVPFKHLTDI 128 (171)
Q Consensus 53 ~~~~~~~~~l~~~l~~~~~~~~~~Dv~i~~~-~~~~~~Hk~iLaa~S~~F~~~f~~~--~~-~~~~i~l~~v~~~~~~~l 128 (171)
+..+.|...+++.|+++++++.+|||++.++ |++|+|||.|||++|+||++||.++ +. ...+|.|.++++++|+.+
T Consensus 3 ~~~~~h~~~~l~~l~~lr~~~~l~DV~L~v~~~~~f~~Hr~vLaa~S~YF~amF~~~~~e~~~~~~v~l~~v~~~~~~~l 82 (557)
T PHA02713 3 IDDIKHNRRVVSNISNLLDDDILCDVIITIGDGEEIKAHKTILAAGSKYFRTLFTTPMIIRDLVTRVNLQMFDKDAVKNI 82 (557)
T ss_pred cchhhhhHHHHHHHHHHHhCCCCCCEEEEeCCCCEEeehHHHHhhcCHHHHHHhcCCchhhccCceEEeccCCHHHHHHH
Confidence 3456899999999999999999999999997 8999999999999999999999988 44 367899999999999999
Q ss_pred HHHHhcCccccCCCCHHHHHHHhhhcCccchHhhhhhhhcc
Q psy14281 129 LEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAEAPQSSVKR 169 (171)
Q Consensus 129 L~~iYtg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~~~r 169 (171)
|+|+|||+ ++.+++.+++.+|++|+++.|++.|..++.+
T Consensus 83 l~y~Yt~~--i~~~nv~~ll~aA~~lqi~~l~~~C~~~l~~ 121 (557)
T PHA02713 83 VQYLYNRH--ISSMNVIDVLKCADYLLIDDLVTDCESYIKD 121 (557)
T ss_pred HHHhcCCC--CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHh
Confidence 99999997 5788999999999999999999999997754
No 2
>KOG4441|consensus
Probab=99.89 E-value=3e-23 Score=178.09 Aligned_cols=117 Identities=27% Similarity=0.483 Sum_probs=112.5
Q ss_pred eeecccHHHHHHHHHHHhhCCCceeEEEEeCCEEEEeehhhhcccChhHHhccccC--CCCCceEEeCCCCHHHHHHHHH
Q psy14281 53 LKWNDFQSNMVTSFKHLRNDNSFTDVTLACEGQTCKAHKMVLSACSPYFKTLLEEN--PSKHPIIILKDVPFKHLTDILE 130 (171)
Q Consensus 53 ~~~~~~~~~l~~~l~~~~~~~~~~Dv~i~~~~~~~~~Hk~iLaa~S~~F~~~f~~~--~~~~~~i~l~~v~~~~~~~lL~ 130 (171)
+..+.|...+++.|+.++..+.+|||++.+++++|+|||.|||++|+||++||.++ |+...+|.+.++++.+++.+++
T Consensus 14 ~~~~~h~~~~l~~l~~lr~~~~lcDv~L~v~~~~~~aHR~VLAa~S~YFraMFt~~l~e~~~~~i~l~~v~~~~l~~ll~ 93 (571)
T KOG4441|consen 14 FTDPSHSKFLLQGLNELREEGLLCDVTLLVGDREFPAHRVVLAACSPYFRAMFTSGLKESKQKEINLEGVDPETLELLLD 93 (571)
T ss_pred cccHHHHHHHHHHHHHHHHhCCCceEEEEECCeeechHHHHHHhccHHHHHHhcCCcccccceEEEEecCCHHHHHHHHH
Confidence 66788999999999999999999999999999999999999999999999999988 8888999999999999999999
Q ss_pred HHhcCccccCCCCHHHHHHHhhhcCccchHhhhhhhhcc
Q psy14281 131 FMYAGEVNVSQDQLPSFLKTADRLKIKGLAEAPQSSVKR 169 (171)
Q Consensus 131 ~iYtg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~~~r 169 (171)
|+|||++.++.+++++|+.+|++|||+.+.+.|..++.+
T Consensus 94 y~Yt~~i~i~~~nVq~ll~aA~~lQi~~v~~~C~~fL~~ 132 (571)
T KOG4441|consen 94 YAYTGKLEISEDNVQELLEAASLLQIPEVVDACCEFLES 132 (571)
T ss_pred HhhcceEEechHhHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999997654
No 3
>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation []. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule []. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [, , ]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.; GO: 0005515 protein binding; PDB: 3M5B_A 1R28_B 3LBZ_A 3E4U_F 3BIM_B 1R2B_A 1R29_A 2VPK_A 2YY9_B 3GA1_A ....
Probab=99.87 E-value=4.1e-22 Score=136.51 Aligned_cols=104 Identities=36% Similarity=0.606 Sum_probs=92.3
Q ss_pred HHHHhhCCCceeEEEEeC-CEEEEeehhhhcccChhHHhccccC-CCCC--ceEEeCCCCHHHHHHHHHHHhcCccccC-
Q psy14281 66 FKHLRNDNSFTDVTLACE-GQTCKAHKMVLSACSPYFKTLLEEN-PSKH--PIIILKDVPFKHLTDILEFMYAGEVNVS- 140 (171)
Q Consensus 66 l~~~~~~~~~~Dv~i~~~-~~~~~~Hk~iLaa~S~~F~~~f~~~-~~~~--~~i~l~~v~~~~~~~lL~~iYtg~~~~~- 140 (171)
|+++++++.++|++|.++ +..|+|||.+|+++|+||+.+|.+. .... ..|.++++++++|..+++|+|+|++.+.
T Consensus 1 ~~~~~~~~~~~D~~i~v~d~~~~~vhk~iL~~~S~~F~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~Y~~~~~~~~ 80 (111)
T PF00651_consen 1 LNDLFNSNEFSDVTIRVGDGKTFYVHKNILAARSPYFRNLFEGSKFKESTVPEISLPDVSPEAFEAFLEYMYTGEIEINS 80 (111)
T ss_dssp HHHHHHHTTS--EEEEETTTEEEEE-HHHHHHHBHHHHHHHTTTTSTTSSEEEEEETTSCHHHHHHHHHHHHHSEEEEE-
T ss_pred ChHHHcCCCCCCEEEEECCCEEEeechhhhhccchhhhhcccccccccccccccccccccccccccccccccCCcccCCH
Confidence 578999999999999999 7999999999999999999999998 2332 3688899999999999999999999998
Q ss_pred CCCHHHHHHHhhhcCccchHhhhhhhhcc
Q psy14281 141 QDQLPSFLKTADRLKIKGLAEAPQSSVKR 169 (171)
Q Consensus 141 ~~~~~~ll~~A~~~~i~~L~~~c~~~~~r 169 (171)
.+++.+++.+|++|+++.|++.|...+.+
T Consensus 81 ~~~~~~ll~lA~~~~~~~L~~~~~~~l~~ 109 (111)
T PF00651_consen 81 DENVEELLELADKLQIPELKKACEKFLQE 109 (111)
T ss_dssp TTTHHHHHHHHHHTTBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 99999999999999999999999986654
No 4
>PHA02790 Kelch-like protein; Provisional
Probab=99.84 E-value=5.2e-21 Score=161.79 Aligned_cols=104 Identities=19% Similarity=0.292 Sum_probs=92.2
Q ss_pred HHHHHHhhCCCceeEEEEeCCEEEEeehhhhcccChhHHhccccC--CCCCceEEe--CCCCHHHHHHHHHHHhcCcccc
Q psy14281 64 TSFKHLRNDNSFTDVTLACEGQTCKAHKMVLSACSPYFKTLLEEN--PSKHPIIIL--KDVPFKHLTDILEFMYAGEVNV 139 (171)
Q Consensus 64 ~~l~~~~~~~~~~Dv~i~~~~~~~~~Hk~iLaa~S~~F~~~f~~~--~~~~~~i~l--~~v~~~~~~~lL~~iYtg~~~~ 139 (171)
+.+-.++..+.+|||++.+| ++|+|||.|||++|+||++||.++ |+. ..|.+ .++++++++.+|+|+|||++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~-~~~~~HR~VLAa~S~YFraMF~~~~~Es~-~~v~~~~~~v~~~~l~~lldy~YTg~l~i 88 (480)
T PHA02790 11 KNILALSMTKKFKTIIEAIG-GNIIVNSTILKKLSPYFRTHLRQKYTKNK-DPVTRVCLDLDIHSLTSIVIYSYTGKVYI 88 (480)
T ss_pred hhHHHHHhhhhhceEEEEcC-cEEeeehhhhhhcCHHHHHHhcCCccccc-cceEEEecCcCHHHHHHHHHhheeeeEEE
Confidence 34556788899999998877 589999999999999999999998 554 34554 4899999999999999999999
Q ss_pred CCCCHHHHHHHhhhcCccchHhhhhhhhcc
Q psy14281 140 SQDQLPSFLKTADRLKIKGLAEAPQSSVKR 169 (171)
Q Consensus 140 ~~~~~~~ll~~A~~~~i~~L~~~c~~~~~r 169 (171)
+.+++++++.+|++|+++.+++.|.+++.+
T Consensus 89 t~~nV~~ll~aA~~Lqi~~v~~~C~~fL~~ 118 (480)
T PHA02790 89 DSHNVVNLLRASILTSVEFIIYTCINFILR 118 (480)
T ss_pred ecccHHHHHHHHHHhChHHHHHHHHHHHHh
Confidence 999999999999999999999999997754
No 5
>PHA03098 kelch-like protein; Provisional
Probab=99.81 E-value=1.8e-20 Score=160.16 Aligned_cols=96 Identities=24% Similarity=0.449 Sum_probs=90.2
Q ss_pred CCCceeEEEEe--CCEEEEeehhhhcccChhHHhccccCCCCCceEEeCCCCHHHHHHHHHHHhcCccccCCCCHHHHHH
Q psy14281 72 DNSFTDVTLAC--EGQTCKAHKMVLSACSPYFKTLLEENPSKHPIIILKDVPFKHLTDILEFMYAGEVNVSQDQLPSFLK 149 (171)
Q Consensus 72 ~~~~~Dv~i~~--~~~~~~~Hk~iLaa~S~~F~~~f~~~~~~~~~i~l~~v~~~~~~~lL~~iYtg~~~~~~~~~~~ll~ 149 (171)
++.+|||+|.+ +|++|+|||.||+++|+||++||.++.. ...|.+++ ++++|+.+|+|+|||++.++.+++.+++.
T Consensus 6 ~~~~~Dv~l~~~~~~~~~~~Hk~vLaa~S~yF~~mf~~~~~-~~~i~l~~-~~~~~~~~l~y~Ytg~~~i~~~~~~~ll~ 83 (534)
T PHA03098 6 LQKFCDESIIIVNGGGIIKVHKIILSSSSEYFKKMFKNNFK-ENEINLNI-DYDSFNEVIKYIYTGKINITSNNVKDILS 83 (534)
T ss_pred cCCCCCEEEEEEcCCEEEEeHHHHHHhhhHHHHHHHhCCCC-CceEEecC-CHHHHHHHHHHhcCCceEEcHHHHHHHHH
Confidence 88999999998 9999999999999999999999998844 67899999 99999999999999999999999999999
Q ss_pred HhhhcCccchHhhhhhhhcc
Q psy14281 150 TADRLKIKGLAEAPQSSVKR 169 (171)
Q Consensus 150 ~A~~~~i~~L~~~c~~~~~r 169 (171)
+|++|+++.|++.|+.++.+
T Consensus 84 ~A~~l~~~~l~~~C~~~l~~ 103 (534)
T PHA03098 84 IANYLIIDFLINLCINYIIK 103 (534)
T ss_pred HHHHhCcHHHHHHHHHHHHH
Confidence 99999999999999996643
No 6
>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac. Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.
Probab=99.78 E-value=4.5e-19 Score=115.76 Aligned_cols=88 Identities=43% Similarity=0.721 Sum_probs=82.4
Q ss_pred eEEEEeCCEEEEeehhhhcccChhHHhccccCC--CCCceEEeCCCCHHHHHHHHHHHhcCccccCCCCHHHHHHHhhhc
Q psy14281 77 DVTLACEGQTCKAHKMVLSACSPYFKTLLEENP--SKHPIIILKDVPFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRL 154 (171)
Q Consensus 77 Dv~i~~~~~~~~~Hk~iLaa~S~~F~~~f~~~~--~~~~~i~l~~v~~~~~~~lL~~iYtg~~~~~~~~~~~ll~~A~~~ 154 (171)
|+++.++|+.|++||.+|+++|+||+.+|.++. .....+.++++++.+|+.+++|+|++++.+...++..++.+|++|
T Consensus 1 dv~i~v~~~~~~~h~~iL~~~s~~f~~~~~~~~~~~~~~~i~l~~~~~~~f~~~l~~ly~~~~~~~~~~~~~l~~~a~~~ 80 (90)
T smart00225 1 DVTLVVGGKKFKAHKAVLAACSPYFKALFSGDFKESKKSEIYLDDVSPEDFRALLEFLYTGKLDLPEENVEELLELADYL 80 (90)
T ss_pred CeEEEECCEEEehHHHHHhhcCHHHHHHHcCCCccCCCCEEEecCCCHHHHHHHHHeecCceeecCHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999873 356789999999999999999999999999988999999999999
Q ss_pred CccchHhhhh
Q psy14281 155 KIKGLAEAPQ 164 (171)
Q Consensus 155 ~i~~L~~~c~ 164 (171)
+++.|++.|+
T Consensus 81 ~~~~l~~~c~ 90 (90)
T smart00225 81 QIPGLVELCE 90 (90)
T ss_pred CcHHHHhhhC
Confidence 9999999985
No 7
>KOG4350|consensus
Probab=99.74 E-value=1.5e-18 Score=139.82 Aligned_cols=111 Identities=27% Similarity=0.492 Sum_probs=97.8
Q ss_pred ccHHHHHHHHHHHhhCCCceeEEEEeCCEEEEeehhhhcccChhHHhccccC--CCCCceEEeCCCCHHHHHHHHHHHhc
Q psy14281 57 DFQSNMVTSFKHLRNDNSFTDVTLACEGQTCKAHKMVLSACSPYFKTLLEEN--PSKHPIIILKDVPFKHLTDILEFMYA 134 (171)
Q Consensus 57 ~~~~~l~~~l~~~~~~~~~~Dv~i~~~~~~~~~Hk~iLaa~S~~F~~~f~~~--~~~~~~i~l~~v~~~~~~~lL~~iYt 134 (171)
..+.++.+.+.+++-+..++||++++++++|+|||+|||+||.|||+++.++ |+.+..|.|++-+.++|+.+|+||||
T Consensus 26 ~i~~~fS~~~~~l~~~e~y~DVtfvve~~rfpAHRvILAaRs~yFRAlLYgGm~Es~q~~ipLq~t~~eAF~~lLrYiYt 105 (620)
T KOG4350|consen 26 AISNNFSQSFDELFTSEDYSDVTFVVEDTRFPAHRVILAARSSYFRALLYGGMQESHQQLIPLQETNSEAFRALLRYIYT 105 (620)
T ss_pred hhccchhHHHHHHhhcCcccceEEEEeccccchhhhhHHHHHHHHHHHHhhhhhhhhhcccccccccHHHHHHHHHHHhh
Confidence 3445668899999999999999999999999999999999999999999999 78888999999899999999999999
Q ss_pred CccccC---CCCHHHHHHHhhhcCccchHhhhhhhh
Q psy14281 135 GEVNVS---QDQLPSFLKTADRLKIKGLAEAPQSSV 167 (171)
Q Consensus 135 g~~~~~---~~~~~~ll~~A~~~~i~~L~~~c~~~~ 167 (171)
|++.+. .+-+.+.|.+|.+|++..|...-.+++
T Consensus 106 g~~~l~~~~ed~lld~LslAh~Ygf~~Le~aiSeYl 141 (620)
T KOG4350|consen 106 GKIDLAGVEEDILLDYLSLAHRYGFIQLETAISEYL 141 (620)
T ss_pred cceecccchHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 999765 345788899999999998887665543
No 8
>KOG4591|consensus
Probab=99.62 E-value=3.2e-16 Score=115.95 Aligned_cols=111 Identities=23% Similarity=0.423 Sum_probs=96.5
Q ss_pred cccHHHHHHHHHHHhhCCCceeEEEEeC---CEEEEeehhhhcccChhHHhccccC-CCCCceEEeCCCCHHHHHHHHHH
Q psy14281 56 NDFQSNMVTSFKHLRNDNSFTDVTLACE---GQTCKAHKMVLSACSPYFKTLLEEN-PSKHPIIILKDVPFKHLTDILEF 131 (171)
Q Consensus 56 ~~~~~~l~~~l~~~~~~~~~~Dv~i~~~---~~~~~~Hk~iLaa~S~~F~~~f~~~-~~~~~~i~l~~v~~~~~~~lL~~ 131 (171)
..+.+.++....+++..+.|+|++|.++ ++.++|||+|||+||++++ |..+ ..+..+..+.++++++|...++|
T Consensus 47 dSF~SRLLaitadL~Ek~qfSDlk~K~~gns~k~i~AHKfVLAARsD~Wk--faN~~dekse~~~~dDad~Ea~~t~iRW 124 (280)
T KOG4591|consen 47 DSFISRLLAITADLLEKEQFSDLKFKFAGNSDKHIPAHKFVLAARSDFWK--FANGGDEKSEELDLDDADFEAFHTAIRW 124 (280)
T ss_pred hhHHHHHHHHHHHHhhcccccceeEEecCCccccCchhhhhhhhhcchhh--hccCCCcchhhhcccccCHHHHHHhhee
Confidence 4688999999999999999999999997 4789999999999999988 3333 33345677889999999999999
Q ss_pred HhcCccccCCCC--HHHHHHHhhhcCccchHhhhhhhhc
Q psy14281 132 MYAGEVNVSQDQ--LPSFLKTADRLKIKGLAEAPQSSVK 168 (171)
Q Consensus 132 iYtg~~~~~~~~--~~~ll~~A~~~~i~~L~~~c~~~~~ 168 (171)
|||+++++..++ +.+++++|..|+++-|++.|+.++.
T Consensus 125 IYTDEidfk~dD~~L~el~e~An~FqLe~Lke~C~k~l~ 163 (280)
T KOG4591|consen 125 IYTDEIDFKEDDEFLLELCELANRFQLELLKERCEKGLG 163 (280)
T ss_pred eeccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999987654 6899999999999999999998654
No 9
>KOG2075|consensus
Probab=99.59 E-value=2.4e-15 Score=123.32 Aligned_cols=117 Identities=23% Similarity=0.319 Sum_probs=106.0
Q ss_pred eeecccHHHHHHHHHHHhhCCCceeEEEEeCC-----EEEEeehhhhcccChhHHhccccC--CCCCceEEeCCCCHHHH
Q psy14281 53 LKWNDFQSNMVTSFKHLRNDNSFTDVTLACEG-----QTCKAHKMVLSACSPYFKTLLEEN--PSKHPIIILKDVPFKHL 125 (171)
Q Consensus 53 ~~~~~~~~~l~~~l~~~~~~~~~~Dv~i~~~~-----~~~~~Hk~iLaa~S~~F~~~f~~~--~~~~~~i~l~~v~~~~~ 125 (171)
..|.....++......+++++..+|+.+++++ +.++|||.+|+..|++|.+||.++ +....+|.++++.+.+|
T Consensus 92 ~nwq~~~~t~~er~~~l~~n~~~adv~fivg~~~~~~q~~paHk~vla~gS~VFdaMf~g~~a~~~s~ei~lpdvepaaF 171 (521)
T KOG2075|consen 92 PNWQAQKETMRERQAALFNNELLADVHFIVGEEDGGSQRIPAHKLVLADGSDVFDAMFYGGLAEDASLEIRLPDVEPAAF 171 (521)
T ss_pred cccccchhhHHHhhHhhccCcccceeEEEeccCCCcccccchhhhhhhcchHHHHHHhccCcccccCceeecCCcChhHh
Confidence 34455667899999999999999999999973 579999999999999999999999 55468999999999999
Q ss_pred HHHHHHHhcCccccCCCCHHHHHHHhhhcCccchHhhhhhhhcc
Q psy14281 126 TDILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLAEAPQSSVKR 169 (171)
Q Consensus 126 ~~lL~~iYtg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~~~r 169 (171)
..+|+|+|++.+.+..+++..++.+|++|.++.|.+.|..++-+
T Consensus 172 l~~L~flYsdev~~~~dtvi~tl~~AkKY~VpaLer~CVkflr~ 215 (521)
T KOG2075|consen 172 LAFLRFLYSDEVKLAADTVITTLYAAKKYLVPALERQCVKFLRK 215 (521)
T ss_pred HHHHHHHhcchhhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999985543
No 10
>KOG4682|consensus
Probab=99.17 E-value=4.3e-11 Score=96.82 Aligned_cols=100 Identities=25% Similarity=0.322 Sum_probs=90.5
Q ss_pred HHHHHhhCCCceeEEEEeCCEEEEeehhhhcccChhHHhccccC--CCCCceEEe----CCCCHHHHHHHHHHHhcCccc
Q psy14281 65 SFKHLRNDNSFTDVTLACEGQTCKAHKMVLSACSPYFKTLLEEN--PSKHPIIIL----KDVPFKHLTDILEFMYAGEVN 138 (171)
Q Consensus 65 ~l~~~~~~~~~~Dv~i~~~~~~~~~Hk~iLaa~S~~F~~~f~~~--~~~~~~i~l----~~v~~~~~~~lL~~iYtg~~~ 138 (171)
..+.++.++..+||++-+-|.+++.||..|. .|+||++||.+. |+++..|.| +.++..+|..++.-+|.++++
T Consensus 59 iyq~lf~q~enSDv~l~alg~eWrlHk~yL~-QS~yf~smf~Gtw~es~~~iIqleI~Dp~Id~~al~~a~gsLY~dEve 137 (488)
T KOG4682|consen 59 IYQNLFLQGENSDVILEALGFEWRLHKPYLF-QSEYFKSMFSGTWKESSMNIIQLEIPDPNIDVVALQVAFGSLYRDEVE 137 (488)
T ss_pred HHHHHHhcCCCcceehhhccceeeeeeeeee-ccHHHHHHhccccChhhCceEEEEcCCCcccHHHHHHHHhhhhhhhee
Confidence 3467888999999999999999999999997 578999999999 666666655 359999999999999999999
Q ss_pred cCCCCHHHHHHHhhhcCccchHhhhhh
Q psy14281 139 VSQDQLPSFLKTADRLKIKGLAEAPQS 165 (171)
Q Consensus 139 ~~~~~~~~ll~~A~~~~i~~L~~~c~~ 165 (171)
+..+.+..++.+|.++++++|.+.|.+
T Consensus 138 I~l~dv~gvlAaA~~lqldgl~qrC~e 164 (488)
T KOG4682|consen 138 IKLSDVVGVLAAACLLQLDGLIQRCGE 164 (488)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 999999999999999999999999987
No 11
>KOG0783|consensus
Probab=98.97 E-value=1.6e-09 Score=94.46 Aligned_cols=107 Identities=21% Similarity=0.370 Sum_probs=76.0
Q ss_pred cHHHHHHHHHHHhhCCCceeEEEEeCCEEEEeehhhhcccChhHHhccccCC--------------CCCceEEeCCCCHH
Q psy14281 58 FQSNMVTSFKHLRNDNSFTDVTLACEGQTCKAHKMVLSACSPYFKTLLEENP--------------SKHPIIILKDVPFK 123 (171)
Q Consensus 58 ~~~~l~~~l~~~~~~~~~~Dv~i~~~~~~~~~Hk~iLaa~S~~F~~~f~~~~--------------~~~~~i~l~~v~~~ 123 (171)
+...+.+-+.+--....++||+|.||+..|+|||+||++||++|+.+|.... .....|.+.++++.
T Consensus 541 fe~sf~kLl~e~~~~ds~hDVtf~vg~~~F~aHKfIl~~rs~flrkL~l~~~~~s~~~dIY~~~~~~~~~~~~ve~i~p~ 620 (1267)
T KOG0783|consen 541 FEGSFPKLLSEENYKDSFHDVTFYVGTSMFHAHKFILCARSSFLRKLLLQKKKSSVSNDIYIEEITQSHSTIRVEDIPPL 620 (1267)
T ss_pred chhhhHHHhhccccccccceEEEEecCeecccceEEEEeccHHHHHHHHhhccccccceeeeecccccCceeeeccCCHH
Confidence 3444444444444457789999999999999999999999999999987661 11234457789999
Q ss_pred HHHHHHHHHhcCccc--------------cCCCCHHH-------HHHHhhhcCccchHhhhh
Q psy14281 124 HLTDILEFMYAGEVN--------------VSQDQLPS-------FLKTADRLKIKGLAEAPQ 164 (171)
Q Consensus 124 ~~~~lL~~iYtg~~~--------------~~~~~~~~-------ll~~A~~~~i~~L~~~c~ 164 (171)
+|+.+|.||||+..- .-..|... +...+++|.+.+|.....
T Consensus 621 mfe~lL~~iYtdt~~~P~heDdidci~fs~~k~N~~qrtrtCeMl~~~lekf~l~el~~~~~ 682 (1267)
T KOG0783|consen 621 MFEILLHYIYTDTLLSPWHEDDIDCIRFSPLKENLSQRTRTCEMLANLLEKFHLAELLPFSV 682 (1267)
T ss_pred HHHHHHHHHhcccccCCccccchhhhhccccccChhhcccHHHHHHHHHhhhhHHhhhhhhh
Confidence 999999999997431 11223333 666777777766655433
No 12
>KOG0783|consensus
Probab=98.93 E-value=5.4e-10 Score=97.33 Aligned_cols=97 Identities=27% Similarity=0.413 Sum_probs=75.4
Q ss_pred CCceeEEEEe-CCEEEEeehhhhcccChhHHhccccC--CCCCceEEeCCCCHHHHHHHHHHHhc-Ccccc-----CCCC
Q psy14281 73 NSFTDVTLAC-EGQTCKAHKMVLSACSPYFKTLLEEN--PSKHPIIILKDVPFKHLTDILEFMYA-GEVNV-----SQDQ 143 (171)
Q Consensus 73 ~~~~Dv~i~~-~~~~~~~Hk~iLaa~S~~F~~~f~~~--~~~~~~i~l~~v~~~~~~~lL~~iYt-g~~~~-----~~~~ 143 (171)
+..-|+.|.+ +|+.++||+++|++|++||..||... |+....+....+..+.+..+|+|+|+ .+..+ ..+.
T Consensus 708 ~e~~d~~i~~KDGkvl~aHkc~L~aRlEYF~smf~~~w~E~sS~t~~~~p~~~e~m~ivLdylYs~d~~~~~k~~~~~dF 787 (1267)
T KOG0783|consen 708 EETMDTVIKLKDGKVLKAHKCFLSARLEYFSSMFQFVWMESSSITVNLSPLTVEHMSIVLDYLYSDDKVELFKDLKESDF 787 (1267)
T ss_pred ccceeEEEEecCCcCcccceeEeeeHHHHHHHHHHHHHhhhccceeecCcchHHHHHHHHHHHHccchHHHHhccchhhh
Confidence 3445777777 66779999999999999999999888 44443333334558999999999994 44432 2345
Q ss_pred HHHHHHHhhhcCccchHhhhhhhhcc
Q psy14281 144 LPSFLKTADRLKIKGLAEAPQSSVKR 169 (171)
Q Consensus 144 ~~~ll~~A~~~~i~~L~~~c~~~~~r 169 (171)
+-+++..||.|-|.+|+++|++.+.|
T Consensus 788 ~~~il~iaDqlli~~Lk~Ice~~ll~ 813 (1267)
T KOG0783|consen 788 MFEILSIADQLLILELKSICEQSLLR 813 (1267)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999999999999999987654
No 13
>KOG2838|consensus
Probab=98.66 E-value=4.2e-08 Score=76.33 Aligned_cols=101 Identities=14% Similarity=0.212 Sum_probs=83.6
Q ss_pred cHHHHHHHHHHHhhCCCceeEEEEeCCEEEEeehhhhcccChhHHhccccCCCCCc----eEEeCCCCHHHHHHHHHHHh
Q psy14281 58 FQSNMVTSFKHLRNDNSFTDVTLACEGQTCKAHKMVLSACSPYFKTLLEENPSKHP----IIILKDVPFKHLTDILEFMY 133 (171)
Q Consensus 58 ~~~~l~~~l~~~~~~~~~~Dv~i~~~~~~~~~Hk~iLaa~S~~F~~~f~~~~~~~~----~i~l~~v~~~~~~~lL~~iY 133 (171)
...++++.+.+.+......|+-|+.....|++||.+|++||++|+.+..+.+.... .|...+++.++|+.+|.++|
T Consensus 113 ea~sf~kD~ad~ye~k~c~dldiiFkeTcfpahRA~laaRCpffK~l~nsd~e~~ae~i~dik~ag~dm~~feafLh~l~ 192 (401)
T KOG2838|consen 113 EANSFLKDFADGYERKVCGDLDIIFKETCFPAHRAFLAARCPFFKILANSDEEPEAEDICDIKFAGFDMDAFEAFLHSLI 192 (401)
T ss_pred chhHHHHHHhhhhheeeeccceeeeeeccchHHHHHHHhhCcchhhhccCCCCcchhhhhhhhhhccChHHHHHHHHHHH
Confidence 45778899999988888999999999999999999999999999999988844333 34556789999999999999
Q ss_pred cCccc---cCCCCHHHHHHHhhhcCccc
Q psy14281 134 AGEVN---VSQDQLPSFLKTADRLKIKG 158 (171)
Q Consensus 134 tg~~~---~~~~~~~~ll~~A~~~~i~~ 158 (171)
+|+.- ....++.-|.+++.-||...
T Consensus 193 tgEfgmEd~~fqn~diL~QL~edFG~~k 220 (401)
T KOG2838|consen 193 TGEFGMEDLGFQNSDILEQLCEDFGCFK 220 (401)
T ss_pred hcccchhhcCCchHHHHHHHHHhhCCch
Confidence 99873 44567777888888887654
No 14
>KOG2716|consensus
Probab=98.66 E-value=8.2e-08 Score=73.51 Aligned_cols=91 Identities=33% Similarity=0.527 Sum_probs=76.8
Q ss_pred EEEEeCCEEEEeehhhhcccChhHHhccccC---CCC-CceEEeCCCCHHHHHHHHHHHhcCccccCCC--CHHHHHHHh
Q psy14281 78 VTLACEGQTCKAHKMVLSACSPYFKTLLEEN---PSK-HPIIILKDVPFKHLTDILEFMYAGEVNVSQD--QLPSFLKTA 151 (171)
Q Consensus 78 v~i~~~~~~~~~Hk~iLaa~S~~F~~~f~~~---~~~-~~~i~l~~v~~~~~~~lL~~iYtg~~~~~~~--~~~~ll~~A 151 (171)
|.+.|||+.|..++.-|.....+|+.|+... +.. ...|-| |-++..|+.+|+||-.|.+.++.. ++.+|++-|
T Consensus 7 vkLnvGG~~F~Tsk~TLtk~dg~fk~m~e~~i~~~~d~s~~IFI-DRSpKHF~~ILNfmRdGdv~LPe~~kel~El~~EA 85 (230)
T KOG2716|consen 7 VKLNVGGTIFKTSKSTLTKFDGFFKTMLETDIPVEKDESGCIFI-DRSPKHFDTILNFMRDGDVDLPESEKELKELLREA 85 (230)
T ss_pred EEEecCCeEEEeehhhhhhhhhHHHHHhhcCCccccCCcCcEEe-cCChhHHHHHHHhhhcccccCccchHHHHHHHHHH
Confidence 4578899999999999999999999999988 222 233544 679999999999999999887654 578999999
Q ss_pred hhcCccchHhhhhhhhcc
Q psy14281 152 DRLKIKGLAEAPQSSVKR 169 (171)
Q Consensus 152 ~~~~i~~L~~~c~~~~~r 169 (171)
.+|.+++|+++|+..+.+
T Consensus 86 ~fYlL~~Lv~~C~~~i~~ 103 (230)
T KOG2716|consen 86 EFYLLDGLVELCQSAIAR 103 (230)
T ss_pred HHhhHHHHHHHHHHHhhh
Confidence 999999999999986543
No 15
>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ]. They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. The Kv family can be divided into several subfamilies on the basis of sequence similarity and function. Four of these subfamilies, Kv1 (Shaker), Kv2 (Shab), Kv3 (Shaw) and Kv4 (Shal), consist of pore-forming alpha subunits that associate with different types of beta subunit. Each alpha subunit comprises six hydrophobic TM domains with a P-domain between the fifth and sixth, which partially resides in the membrane. The fourth TM domain has positively charged residues at every third residue and acts as a voltage sensor, which triggers the conformational change that opens the channel pore in response to a displacement in membrane potential []. More recently, 4 new electrically-silent alpha subunits have been cloned: Kv5 (KCNF), Kv6 (KCNG), Kv8 and Kv9 (KCNS). These subunits do not themselves possess any functional activity, but appear to form heteromeric channels with Kv2 subunits, and thus modulate Shab channel activity []. When highly expressed, they inhibit channel activity, but at lower levels show more specific modulatory actions. The N-terminal, cytoplasmic tetramerization domain (T1) of voltage-gated potassium channels encodes molecular determinants for subfamily-specific assembly of alpha-subunits into functional tetrameric channels []. This domain is found in a subset of a larger group of proteins that contain the BTB/POZ domain.; GO: 0005249 voltage-gated potassium channel activity, 0006813 potassium ion transport, 0008076 voltage-gated potassium channel complex, 0016020 membrane; PDB: 1NN7_A 3KVT_A 1EXB_E 1QDV_A 1DSX_E 1QDW_F 3LUT_B 3LNM_B 2A79_B 3DRY_C ....
Probab=98.31 E-value=2.6e-06 Score=56.57 Aligned_cols=85 Identities=16% Similarity=0.237 Sum_probs=66.0
Q ss_pred EEEEeCCEEEEeehhhhc-ccChhHHhccccC-----CCCCceEEeCCCCHHHHHHHHHHHhc-CccccC-CCCHHHHHH
Q psy14281 78 VTLACEGQTCKAHKMVLS-ACSPYFKTLLEEN-----PSKHPIIILKDVPFKHLTDILEFMYA-GEVNVS-QDQLPSFLK 149 (171)
Q Consensus 78 v~i~~~~~~~~~Hk~iLa-a~S~~F~~~f~~~-----~~~~~~i~l~~v~~~~~~~lL~~iYt-g~~~~~-~~~~~~ll~ 149 (171)
|.+.|||+.|.+-+..|. ....+|..++... ......+-+ +-++..|+.+|+|+.+ +.+..+ ...+..+++
T Consensus 1 V~lNVGG~~f~~~~~tL~~~~~s~l~~~~~~~~~~~~~~~~~~~fi-DRdp~~F~~IL~ylr~~~~l~~~~~~~~~~l~~ 79 (94)
T PF02214_consen 1 VRLNVGGTIFETSRSTLTRYPDSLLARLFSGERSDDYDDDDGEYFI-DRDPELFEYILNYLRTGGKLPIPDEICLEELLE 79 (94)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTSHHHTGHGGGEETTTTEEEE-SS-HHHHHHHHHHHHHTSSB---TTS-HHHHHH
T ss_pred CEEEECCEEEEEcHHHHhhCCCChhhhHHhhccccccCCccceEEe-ccChhhhhHHHHHHhhcCccCCCCchhHHHHHH
Confidence 678999999999999998 4567899988863 344466666 5799999999999999 677664 556889999
Q ss_pred HhhhcCccch-Hhhh
Q psy14281 150 TADRLKIKGL-AEAP 163 (171)
Q Consensus 150 ~A~~~~i~~L-~~~c 163 (171)
-|++|+++.+ ++.|
T Consensus 80 Ea~fy~l~~l~i~~c 94 (94)
T PF02214_consen 80 EAEFYGLDELFIEDC 94 (94)
T ss_dssp HHHHHT-HHHHBHHC
T ss_pred HHHHcCCCccccCCC
Confidence 9999999999 7877
No 16
>KOG2838|consensus
Probab=98.18 E-value=5.6e-07 Score=70.18 Aligned_cols=108 Identities=21% Similarity=0.311 Sum_probs=76.0
Q ss_pred cHHHHHHHHHHHhhCCCceeEEEE-e-CC--------------EEEEeehhhhcccChhHHhccccC-----CC------
Q psy14281 58 FQSNMVTSFKHLRNDNSFTDVTLA-C-EG--------------QTCKAHKMVLSACSPYFKTLLEEN-----PS------ 110 (171)
Q Consensus 58 ~~~~l~~~l~~~~~~~~~~Dv~i~-~-~~--------------~~~~~Hk~iLaa~S~~F~~~f~~~-----~~------ 110 (171)
...++-..++.++...-..|++|+ + +| .++.||+.|.++||++||.++... +.
T Consensus 218 ~~kkLd~Dmkglfd~~c~~d~li~~ssD~elveafggeeNc~deeikahkai~aaRS~ffRnLL~RkiregeE~sdrtlr 297 (401)
T KOG2838|consen 218 CFKKLDEDMKGLFDQDCKHDDLIIESSDGELVEAFGGEENCEDEEIKAHKAIAAARSKFFRNLLLRKIREGEEGSDRTLR 297 (401)
T ss_pred CchhhhHHHHHHHHhhcccCcEEEEeccchhhhhcCCcccchhHHHHHHHHHHHhhhHHHHHHHHHHhhccccccccccc
Confidence 345677788888887666665554 3 33 268999999999999999987654 11
Q ss_pred CCceEEeCC--CCHHHHHHHHHHHhcCccccCC----------------------------CCHHHHHHHhhhcCccchH
Q psy14281 111 KHPIIILKD--VPFKHLTDILEFMYAGEVNVSQ----------------------------DQLPSFLKTADRLKIKGLA 160 (171)
Q Consensus 111 ~~~~i~l~~--v~~~~~~~lL~~iYtg~~~~~~----------------------------~~~~~ll~~A~~~~i~~L~ 160 (171)
....|.+.+ ++..---.+|.++||+.++++. ...++|+..|-+|.++-|.
T Consensus 298 ~PkRIifdE~I~PkafA~i~lhclYTD~lDlSl~hkce~SigSLSeakAitnaGkpn~~qaaeAleL~~IAlFfEfemLa 377 (401)
T KOG2838|consen 298 RPKRIIFDELIFPKAFAPIFLHCLYTDRLDLSLAHKCEDSIGSLSEAKAITNAGKPNDLQAAEALELIEIALFFEFEMLA 377 (401)
T ss_pred CCceeechhhhcchhhhhhhhhhheecccchhhcccCCcccccHHHHHHHHcCCCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 124566654 3333445678999998763321 2346788999999999999
Q ss_pred hhhhh
Q psy14281 161 EAPQS 165 (171)
Q Consensus 161 ~~c~~ 165 (171)
..|+.
T Consensus 378 Qa~e~ 382 (401)
T KOG2838|consen 378 QACED 382 (401)
T ss_pred HHHHH
Confidence 99987
No 17
>smart00512 Skp1 Found in Skp1 protein family. Family of Skp1 (kinetochore protein required for cell cycle progression) and elongin C (subunit of RNA polymerase II transcription factor SIII) homologues.
Probab=97.53 E-value=0.00022 Score=48.31 Aligned_cols=78 Identities=22% Similarity=0.303 Sum_probs=58.5
Q ss_pred EEEEe-CCEEEEeehhhhcccChhHHhccccCC---CCCceEEeCCCCHHHHHHHHHHHhcCc-cc--------------
Q psy14281 78 VTLAC-EGQTCKAHKMVLSACSPYFKTLLEENP---SKHPIIILKDVPFKHLTDILEFMYAGE-VN-------------- 138 (171)
Q Consensus 78 v~i~~-~~~~~~~Hk~iLaa~S~~F~~~f~~~~---~~~~~i~l~~v~~~~~~~lL~~iYtg~-~~-------------- 138 (171)
+++.. +|.+|.+.+.+. ..|..++.++.+.. .+...|.+++++..+++.+++|++... ..
T Consensus 4 v~L~S~Dg~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~Ipl~~v~~~~L~~Vi~yc~~h~~~~~~~~~~~~~~~wD~ 82 (104)
T smart00512 4 IKLISSDGEVFEVEREVA-RQSKTIKAMIEDLGVDDENNNPIPLPNVTSKILSKVIEYCEHHVDDPPSVADKDDIPTWDA 82 (104)
T ss_pred EEEEeCCCCEEEecHHHH-HHHHHHHHHHHccCcccCCCCCccCCCcCHHHHHHHHHHHHHcccCCCCccccccccHHHH
Confidence 45544 778999999976 58899999997651 122579999999999999999996321 10
Q ss_pred ----cCCCCHHHHHHHhhhcCc
Q psy14281 139 ----VSQDQLPSFLKTADRLKI 156 (171)
Q Consensus 139 ----~~~~~~~~ll~~A~~~~i 156 (171)
+..+.+.+|+.||++++|
T Consensus 83 ~F~~~d~~~l~dLl~AAnyL~I 104 (104)
T smart00512 83 EFLKIDQETLFELILAANYLDI 104 (104)
T ss_pred HHHcCCHHHHHHHHHHHHhhCC
Confidence 333467889999999875
No 18
>KOG3473|consensus
Probab=97.50 E-value=0.00043 Score=45.86 Aligned_cols=78 Identities=15% Similarity=0.322 Sum_probs=60.6
Q ss_pred EEEEe-CCEEEEeehhhhcccChhHHhccccC----CCCCceEEeCCCCHHHHHHHHHHH-h----cCc------cccCC
Q psy14281 78 VTLAC-EGQTCKAHKMVLSACSPYFKTLLEEN----PSKHPIIILKDVPFKHLTDILEFM-Y----AGE------VNVSQ 141 (171)
Q Consensus 78 v~i~~-~~~~~~~Hk~iLaa~S~~F~~~f~~~----~~~~~~i~l~~v~~~~~~~lL~~i-Y----tg~------~~~~~ 141 (171)
|.++. +|.+|-.-|-+ |.-|+-.|+|+.++ +....++.+++++...++.+..|+ | ++. .+++.
T Consensus 19 VkLvS~Ddhefiikre~-AmtSgTiraml~gpg~~se~~~n~v~f~di~shiLeKvc~Yl~Yk~rY~~~s~eiPeF~Ipp 97 (112)
T KOG3473|consen 19 VKLVSSDDHEFIIKREH-AMTSGTIRAMLSGPGVFSEAEKNEVYFRDIPSHILEKVCEYLAYKVRYTNSSTEIPEFDIPP 97 (112)
T ss_pred eEeecCCCcEEEEeehh-hhhhhHHHHHHcCCccccccccceEEeccchHHHHHHHHHHhhheeeeccccccCCCCCCCH
Confidence 44444 56677666654 66789999999987 556678999999999999999998 3 433 35677
Q ss_pred CCHHHHHHHhhhcCc
Q psy14281 142 DQLPSFLKTADRLKI 156 (171)
Q Consensus 142 ~~~~~ll~~A~~~~i 156 (171)
+-.++||.+|+++.+
T Consensus 98 emaleLL~aAn~Lec 112 (112)
T KOG3473|consen 98 EMALELLMAANYLEC 112 (112)
T ss_pred HHHHHHHHHhhhhcC
Confidence 888999999998853
No 19
>KOG2714|consensus
Probab=97.31 E-value=0.00085 Score=55.54 Aligned_cols=88 Identities=18% Similarity=0.198 Sum_probs=67.8
Q ss_pred EEEEeCCEEEEeehhhhcccC--hhHHhccccC---CCCCceEEeCCCCHHHHHHHHHHHhcCccccCCCCHHHHHH-Hh
Q psy14281 78 VTLACEGQTCKAHKMVLSACS--PYFKTLLEEN---PSKHPIIILKDVPFKHLTDILEFMYAGEVNVSQDQLPSFLK-TA 151 (171)
Q Consensus 78 v~i~~~~~~~~~Hk~iLaa~S--~~F~~~f~~~---~~~~~~i~l~~v~~~~~~~lL~~iYtg~~~~~~~~~~~ll~-~A 151 (171)
|.+.|+|+.|.-.+.-|+... .+|-+++.+. ........+-|-+|+.|..+|+|+-||+++++......++. -|
T Consensus 13 V~lNVGGriF~Ts~qTL~~~~~DSffsaL~s~~~~s~~~~~~~iFIDRDPdlFaviLn~LRTg~L~~~g~~~~~llhdEA 92 (465)
T KOG2714|consen 13 VKLNVGGRIFETSAQTLTWIPRDSFFSALLSGRINSLKDESGAIFIDRDPDLFAVILNLLRTGDLDASGVFPERLLHDEA 92 (465)
T ss_pred EEEecCceEEecchhhhhcCCcchHHHHHhcCccccccCCCCceEecCCchHHHHHHHHHhcCCCCCccCchhhhhhhhh
Confidence 677899999998888887765 6888888765 22222234446789999999999999999997665555444 99
Q ss_pred hhcCccchHh---hhhh
Q psy14281 152 DRLKIKGLAE---APQS 165 (171)
Q Consensus 152 ~~~~i~~L~~---~c~~ 165 (171)
.+|+++.|.. +|+.
T Consensus 93 ~fYGl~~llrrl~~~~~ 109 (465)
T KOG2714|consen 93 MFYGLTPLLRRLTLCEE 109 (465)
T ss_pred hhcCcHHHHHHhhcCcc
Confidence 9999999987 5655
No 20
>PF03931 Skp1_POZ: Skp1 family, tetramerisation domain; InterPro: IPR016073 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex []. It was found to bind several F-box containing proteins (e.g., Cdc4, Skp2, cyclin F) and to be involved in the ubiquitin protein degradation pathway. A yeast homologue of SKP1 (P52286) was identified in the centromere bound kinetochore complex [] and is also involved in the ubiquitin pathway []. In Dictyostelium discoideum (Slime mold) FP21 was shown to be glycosylated in the cytosol and has homology to SKP1 []. This entry represents a POZ domain with a core structure consisting of beta(2)/alpha(2)/beta(2)/alpha(2) in two layers, alpha/beta. This domain is found at the N-terminal of SKP1 proteins [] as well as in subunit D of the centromere DNA-binding protein complex Cbf3 []. ; GO: 0006511 ubiquitin-dependent protein catabolic process; PDB: 1LM8_C 2XAI_E 1VCB_E 3ZRC_K 3ZRF_E 3DCG_B 2C9W_C 1LQB_B 2IZV_C 1HV2_A ....
Probab=97.19 E-value=0.0027 Score=38.82 Aligned_cols=56 Identities=23% Similarity=0.305 Sum_probs=44.0
Q ss_pred EEEEe-CCEEEEeehhhhcccChhHHhccccCCCCCceEEeCCCCHHHHHHHHHHHhc
Q psy14281 78 VTLAC-EGQTCKAHKMVLSACSPYFKTLLEENPSKHPIIILKDVPFKHLTDILEFMYA 134 (171)
Q Consensus 78 v~i~~-~~~~~~~Hk~iLaa~S~~F~~~f~~~~~~~~~i~l~~v~~~~~~~lL~~iYt 134 (171)
+++.. ||..|.+.+.+.. .|..++.|+.........|.+++++..+++.+++|++.
T Consensus 3 v~L~SsDg~~f~V~~~~a~-~S~~i~~ml~~~~~~~~~Ipl~~v~~~~L~kViewc~~ 59 (62)
T PF03931_consen 3 VKLVSSDGQEFEVSREAAK-QSKTIKNMLEDLGDEDEPIPLPNVSSRILKKVIEWCEH 59 (62)
T ss_dssp EEEEETTSEEEEEEHHHHT-TSHHHHHHHHCTCCCGTEEEETTS-HHHHHHHHHHHHH
T ss_pred EEEEcCCCCEEEeeHHHHH-HhHHHHHHHhhhcccccccccCccCHHHHHHHHHHHHh
Confidence 44544 7889999988855 88999999987633333799999999999999999963
No 21
>KOG0511|consensus
Probab=97.17 E-value=0.00013 Score=59.43 Aligned_cols=87 Identities=20% Similarity=0.173 Sum_probs=63.4
Q ss_pred ceeEEEEe-CCEEEEeehhhhcccChhHHhccccCCCCCceEEeCCCCHHHHHHHHHHHhcCccccCCCCHHHHHHHhhh
Q psy14281 75 FTDVTLAC-EGQTCKAHKMVLSACSPYFKTLLEENPSKHPIIILKDVPFKHLTDILEFMYAGEVNVSQDQLPSFLKTADR 153 (171)
Q Consensus 75 ~~Dv~i~~-~~~~~~~Hk~iLaa~S~~F~~~f~~~~~~~~~i~l~~v~~~~~~~lL~~iYtg~~~~~~~~~~~ll~~A~~ 153 (171)
..|+++.. +|..|-||++.|+++|.+|..-+..-.-...+|.-..+-+..|..+++|+|-..-.+-.+...+++.+..+
T Consensus 149 ~~di~f~~q~g~~f~ahkfll~arSs~~~~k~v~~~~~~heI~~~~v~~~~f~~flk~lyl~~na~~~~qynallsi~~k 228 (516)
T KOG0511|consen 149 CHDIDFLQQEGANFDAHKFLLEARSSNYFPKDVMFYVQGHEIEAHRVILSAFSPFLKQLYLNTNAEWKDQYNALLSIEVK 228 (516)
T ss_pred ccchHHHhhccccccHHHHHHHhhhcccCchhhhhccccCchhhhhhhHhhhhHHHHHHHHhhhhhhhhHHHHHHhhhhh
Confidence 45888876 67789999999999999886554433223355655567789999999999976444445555778888888
Q ss_pred cCccchHh
Q psy14281 154 LKIKGLAE 161 (171)
Q Consensus 154 ~~i~~L~~ 161 (171)
|+++.|..
T Consensus 229 F~~e~l~~ 236 (516)
T KOG0511|consen 229 FSKEKLSL 236 (516)
T ss_pred ccHHHhHH
Confidence 88776653
No 22
>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised. This family is found in bacteria. This presumed domain is typically between 170 to 303 amino acids in length. The N-terminal half of this family is a BTB-like domain.
Probab=97.03 E-value=0.00042 Score=55.54 Aligned_cols=83 Identities=12% Similarity=0.203 Sum_probs=69.8
Q ss_pred EEEEeehhhhcccChhHHhcccc---CCCCCceEEeC-CCCHHHHHHHHHHHhcCccccCCCCHHHHHHHhhhcCccchH
Q psy14281 85 QTCKAHKMVLSACSPYFKTLLEE---NPSKHPIIILK-DVPFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKIKGLA 160 (171)
Q Consensus 85 ~~~~~Hk~iLaa~S~~F~~~f~~---~~~~~~~i~l~-~v~~~~~~~lL~~iYtg~~~~~~~~~~~ll~~A~~~~i~~L~ 160 (171)
+.|.|.+-+|-..=.||+..+.. ......+|+|. .-+..+|+-+++|+....-.++..|+..++.-|++++|+.|+
T Consensus 14 rdF~C~~~lL~~~M~YF~~~l~~~~~~~~~~~~idisVhCDv~iF~WLm~yv~~~~p~l~~~NvvsIliSS~FL~M~~Lv 93 (317)
T PF11822_consen 14 RDFTCPRDLLVSEMRYFAEYLSRYINDSQRWEEIDISVHCDVHIFEWLMRYVKGEPPSLTPSNVVSILISSEFLQMESLV 93 (317)
T ss_pred eeeeccHHHHHHhhHHHHHHHhhcccccCcCCCcceEEecChhHHHHHHHHhhcCCCcCCcCcEEEeEehhhhhccHHHH
Confidence 57999999999999999999965 32333445554 467789999999999877889999999999999999999999
Q ss_pred hhhhhhh
Q psy14281 161 EAPQSSV 167 (171)
Q Consensus 161 ~~c~~~~ 167 (171)
+.|-.+.
T Consensus 94 e~cl~y~ 100 (317)
T PF11822_consen 94 EECLQYC 100 (317)
T ss_pred HHHHHHH
Confidence 9887754
No 23
>KOG0511|consensus
Probab=96.88 E-value=0.00041 Score=56.66 Aligned_cols=72 Identities=21% Similarity=0.276 Sum_probs=54.9
Q ss_pred EEEEeehhhhcccChhHHhccccC--CCC-C---ceEEeCCCCHHHHHHHHHHHhcCccccCCCCHHHHHHHhhhcCcc
Q psy14281 85 QTCKAHKMVLSACSPYFKTLLEEN--PSK-H---PIIILKDVPFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKIK 157 (171)
Q Consensus 85 ~~~~~Hk~iLaa~S~~F~~~f~~~--~~~-~---~~i~l~~v~~~~~~~lL~~iYtg~~~~~~~~~~~ll~~A~~~~i~ 157 (171)
.+++||..+++.. +||+.||.++ ++. + ....+|.....+.+.+++|+|+.+.++..+...+++-.|+++.+.
T Consensus 301 ~RyP~hla~i~R~-eyfk~mf~g~f~e~s~n~~~p~lslp~~~~~vveI~lr~lY~d~tdi~~~~A~dvll~ad~lal~ 378 (516)
T KOG0511|consen 301 DRYPAHLARILRV-EYFKSMFVGDFIESSVNDTRPGLSLPSLADVVVEIDLRNLYCDQTDIIFDVASDVLLFADKLALA 378 (516)
T ss_pred ccccHHHHHHHHH-HHHHHHhccchhhhcCCccccccccchHHHHHHHHHHHHhhcccccchHHHHhhHHHHhhHhhhh
Confidence 4599999998755 7999999999 422 2 233556677889999999999998888777777777777666544
No 24
>KOG1665|consensus
Probab=96.64 E-value=0.0073 Score=46.28 Aligned_cols=87 Identities=18% Similarity=0.217 Sum_probs=67.7
Q ss_pred EEEEeCCEEEEeehhhhcccC--hhHHhccccC-----CCCCceEEeCCCCHHHHHHHHHHHhcCcccc-CCCCHHHHHH
Q psy14281 78 VTLACEGQTCKAHKMVLSACS--PYFKTLLEEN-----PSKHPIIILKDVPFKHLTDILEFMYAGEVNV-SQDQLPSFLK 149 (171)
Q Consensus 78 v~i~~~~~~~~~Hk~iLaa~S--~~F~~~f~~~-----~~~~~~i~l~~v~~~~~~~lL~~iYtg~~~~-~~~~~~~ll~ 149 (171)
|.+.++|+.|....--|..+- ..+.+||.+. ++....+ +-+-++..|+.+|+|+-.|.+.. +..++..+++
T Consensus 11 vrlnigGk~f~TTidTlv~rEPDSMLa~MF~~~g~~~~~d~kGa~-lIDRsp~yFepIlNyLr~Gq~~~~s~i~~lgvLe 89 (302)
T KOG1665|consen 11 VRLNIGGKKFCTTIDTLVIREPDSMLAAMFSGRGAMCQEDKKGAV-LIDRSPKYFEPILNYLRDGQIPSLSDIDCLGVLE 89 (302)
T ss_pred heeecCCeEEEEeehhhcccCchHHHHHHHccCCCccccccCceE-EEccCchhhHHHHHHHhcCceeecCCccHHHHHH
Confidence 667789998887777666663 4677888877 3333334 44678999999999999999864 6678999999
Q ss_pred HhhhcCccchHhhhhh
Q psy14281 150 TADRLKIKGLAEAPQS 165 (171)
Q Consensus 150 ~A~~~~i~~L~~~c~~ 165 (171)
.|++|+|-.|++--+.
T Consensus 90 eArff~i~sL~~hle~ 105 (302)
T KOG1665|consen 90 EARFFQILSLKDHLED 105 (302)
T ss_pred HhhHHhhHhHHhHHhh
Confidence 9999999999886554
No 25
>KOG1724|consensus
Probab=96.19 E-value=0.011 Score=43.24 Aligned_cols=82 Identities=23% Similarity=0.276 Sum_probs=60.4
Q ss_pred CCEEEEeehhhhcccChhHHhccccCCCCC--ceEEeCCCCHHHHHHHHHHHhcCcc-----------------------
Q psy14281 83 EGQTCKAHKMVLSACSPYFKTLLEENPSKH--PIIILKDVPFKHLTDILEFMYAGEV----------------------- 137 (171)
Q Consensus 83 ~~~~~~~Hk~iLaa~S~~F~~~f~~~~~~~--~~i~l~~v~~~~~~~lL~~iYtg~~----------------------- 137 (171)
+|+.|.+-..+ +..|..+..++....... ..|.|++|+..+|..++.|++.-.-
T Consensus 13 DG~~f~ve~~~-a~~s~~i~~~~~~~~~~~~~~~IPl~nV~~~iL~kVIewC~~Hk~d~~~~~~~~~~~~~~~i~~WD~~ 91 (162)
T KOG1724|consen 13 DGEIFEVEEEV-ARQSQTISAHMIEDGCADENDPIPLPNVTSKILKKVIEWCKKHKDDDPANPEDKELPEETDIPEWDAE 91 (162)
T ss_pred CCceeehhHHH-HHHhHHHHHHHHHcCCCccCCccccCccCHHHHHHHHHHHHHcccccccccccccccccCCccHHHHH
Confidence 67777776665 445667777666542222 4799999999999999999986321
Q ss_pred --ccCCCCHHHHHHHhhhcCccchHhhhhh
Q psy14281 138 --NVSQDQLPSFLKTADRLKIKGLAEAPQS 165 (171)
Q Consensus 138 --~~~~~~~~~ll~~A~~~~i~~L~~~c~~ 165 (171)
.+....+.+++.+|.+++|++|.++|-+
T Consensus 92 Flk~d~~tLfdli~AAnyLdi~gLl~~~ck 121 (162)
T KOG1724|consen 92 FLKVDQGTLFDLILAANYLDIKGLLDLTCK 121 (162)
T ss_pred HHhcCHHHHHHHHHHhhhcccHHHHHHHHH
Confidence 1122467889999999999999998865
No 26
>KOG1987|consensus
Probab=95.88 E-value=0.0026 Score=50.62 Aligned_cols=84 Identities=21% Similarity=0.155 Sum_probs=65.4
Q ss_pred CEEEEeehhhhcccChhHHhccccC--CCCCceEEeCCCCHHHHHHHHHHHhcCccccCCCCH---HHHHHHhhhcCccc
Q psy14281 84 GQTCKAHKMVLSACSPYFKTLLEEN--PSKHPIIILKDVPFKHLTDILEFMYAGEVNVSQDQL---PSFLKTADRLKIKG 158 (171)
Q Consensus 84 ~~~~~~Hk~iLaa~S~~F~~~f~~~--~~~~~~i~l~~v~~~~~~~lL~~iYtg~~~~~~~~~---~~ll~~A~~~~i~~ 158 (171)
++.+.+|+.++++++++|+.++... ......+.+.+.++..++.+..|.|+..-....... ..++.++..++.+.
T Consensus 109 ~g~~~~~~~~~~a~~~V~~~~~~~d~~~~~~~~~~~~d~~~~~~~~~~~F~~~~s~~~~~~~~~~~~~~~a~~f~~~~~~ 188 (297)
T KOG1987|consen 109 NGFLVAHKLVLVARSEVFEAMGKSDVFKESSKLITLLEEKPEVLEALNGFQVLPSQVSSVERIFEKHPDLAAAFKYKNRH 188 (297)
T ss_pred CcEEEcCceEEEeeecceeeecccccchhccccccccccchhhHhhhceEEEeccchHHHHHhhcCChhhhhccccccHH
Confidence 5669999999999999999999887 333445577788999999999999985433222223 36777899999999
Q ss_pred hHhhhhhhh
Q psy14281 159 LAEAPQSSV 167 (171)
Q Consensus 159 L~~~c~~~~ 167 (171)
++..|...+
T Consensus 189 lk~~~~~~l 197 (297)
T KOG1987|consen 189 LKLACMPVL 197 (297)
T ss_pred HHHHHHHHH
Confidence 999988744
No 27
>COG5201 SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones]
Probab=95.85 E-value=0.023 Score=39.79 Aligned_cols=86 Identities=20% Similarity=0.223 Sum_probs=63.0
Q ss_pred EEEE-eCCEEEEeehhhhcccChhHHhccccCCCCCceEEeCCCCHHHHHHHHHHHhcCcccc-----------------
Q psy14281 78 VTLA-CEGQTCKAHKMVLSACSPYFKTLLEENPSKHPIIILKDVPFKHLTDILEFMYAGEVNV----------------- 139 (171)
Q Consensus 78 v~i~-~~~~~~~~Hk~iLaa~S~~F~~~f~~~~~~~~~i~l~~v~~~~~~~lL~~iYtg~~~~----------------- 139 (171)
+.+. .+|..|.+.+.+ |-+|-..+.|+.........|..++|...+|..+++|+-..+-+.
T Consensus 4 i~l~s~dge~F~vd~~i-AerSiLikN~l~d~~~~n~p~p~pnVrSsvl~kv~ew~ehh~~s~sede~d~~~rks~p~D~ 82 (158)
T COG5201 4 IELESIDGEIFRVDENI-AERSILIKNMLCDSTACNYPIPAPNVRSSVLMKVQEWMEHHTSSLSEDENDLEIRKSKPSDF 82 (158)
T ss_pred eEEEecCCcEEEehHHH-HHHHHHHHHHhccccccCCCCcccchhHHHHHHHHHHHHhccccCCCccChHhhhccCCccH
Confidence 4444 466777777665 788989999877664444557788999999999999996432211
Q ss_pred --------CCCCHHHHHHHhhhcCccchHhhhh
Q psy14281 140 --------SQDQLPSFLKTADRLKIKGLAEAPQ 164 (171)
Q Consensus 140 --------~~~~~~~ll~~A~~~~i~~L~~~c~ 164 (171)
..+.+.++.-+|.++.++.|.++|=
T Consensus 83 wdr~Fm~vDqemL~eI~laaNYL~ikpLLd~gC 115 (158)
T COG5201 83 WDRFFMEVDQEMLLEICLAANYLEIKPLLDLGC 115 (158)
T ss_pred HHHHHHHhhHHHHHHHHHhhccccchHHHHHHH
Confidence 1134567888999999999999874
No 28
>KOG2715|consensus
Probab=95.36 E-value=0.042 Score=40.29 Aligned_cols=89 Identities=18% Similarity=0.156 Sum_probs=66.3
Q ss_pred eEEEEeCCEEEEeehhhhcccChhH-HhccccC---CC--CCceEEeCCCCHHHHHHHHHHHhcCccccCCCCHHHHHHH
Q psy14281 77 DVTLACEGQTCKAHKMVLSACSPYF-KTLLEEN---PS--KHPIIILKDVPFKHLTDILEFMYAGEVNVSQDQLPSFLKT 150 (171)
Q Consensus 77 Dv~i~~~~~~~~~Hk~iLaa~S~~F-~~~f~~~---~~--~~~~i~l~~v~~~~~~~lL~~iYtg~~~~~~~~~~~ll~~ 150 (171)
=|.+.|||+.|-.-|.-|+.-+.-| +.+.... ++ ...--.+-+-+|..|..+|+|+-.|++-+..-.=..+|.-
T Consensus 22 wVRlNVGGt~f~TtktTl~rdp~sFl~rl~q~~~~l~sdrDetGAYlIDRDP~~FgpvLNylRhgklvl~~l~eeGvL~E 101 (210)
T KOG2715|consen 22 WVRLNVGGTVFLTTKTTLPRDPKSFLYRLCQREKDLPSDRDETGAYLIDRDPFYFGPVLNYLRHGKLVLNKLSEEGVLEE 101 (210)
T ss_pred EEEEecCCEEEEeeeeccccCcHHHHHHHHhcccCCCCCccccCceEeccCcchHHHHHHHHhcchhhhhhhhhhccchh
Confidence 3666789999999999999988555 4444433 11 2223345567889999999999999998876334568999
Q ss_pred hhhcCccchHhhhhh
Q psy14281 151 ADRLKIKGLAEAPQS 165 (171)
Q Consensus 151 A~~~~i~~L~~~c~~ 165 (171)
|++|+++.|..+-..
T Consensus 102 Aefyn~~~li~likd 116 (210)
T KOG2715|consen 102 AEFYNDPSLIQLIKD 116 (210)
T ss_pred hhccCChHHHHHHHH
Confidence 999999988877654
No 29
>KOG3840|consensus
Probab=93.03 E-value=0.35 Score=38.90 Aligned_cols=83 Identities=11% Similarity=0.199 Sum_probs=62.6
Q ss_pred ceeEEEEeCCEEEEeehhhhcccC-hhHHhccccC-----CCCCceEEe-CCCCHHHHHHHHHHHhcCccccCC-CCHHH
Q psy14281 75 FTDVTLACEGQTCKAHKMVLSACS-PYFKTLLEEN-----PSKHPIIIL-KDVPFKHLTDILEFMYAGEVNVSQ-DQLPS 146 (171)
Q Consensus 75 ~~Dv~i~~~~~~~~~Hk~iLaa~S-~~F~~~f~~~-----~~~~~~i~l-~~v~~~~~~~lL~~iYtg~~~~~~-~~~~~ 146 (171)
.--++..+++..|-+-+.+|.+.- ..+-.||.++ +....+.++ ++++..+|+.+|+|--+|.+.-+. -.+.+
T Consensus 95 ~~~~t~lvd~~rf~v~q~llt~~p~Tmlg~mf~~g~~f~~pNErgEyeVAdGi~s~vFRAILdYYksG~iRCP~~vSvpE 174 (438)
T KOG3840|consen 95 GDKVCLLVDQTRFLVSQRLLTSKPDTMLGRMFSMGADLVSPNERDEFEVADGMTSSCFRAILDYYQSGTMRCPSSVSVSE 174 (438)
T ss_pred CcceEEEeeeEEEEeeeeeecCCcchhhhhhhcccccccCCCcCCceehhcchhHHHHHHHHHHHhcCceeCCCCCchHH
Confidence 334777788899999999988763 3445666655 344456666 469999999999999999997654 46888
Q ss_pred HHHHhhhcCcc
Q psy14281 147 FLKTADRLKIK 157 (171)
Q Consensus 147 ll~~A~~~~i~ 157 (171)
|-++++++.|+
T Consensus 175 LrEACDYLlip 185 (438)
T KOG3840|consen 175 LREACDYLLVP 185 (438)
T ss_pred HHhhcceEEee
Confidence 99999988665
No 30
>KOG2723|consensus
Probab=89.69 E-value=1.3 Score=34.13 Aligned_cols=91 Identities=8% Similarity=0.142 Sum_probs=57.5
Q ss_pred CceeEEEE-eCCEEEEeehhhhcc-cChhHHhccccC----CCCCceEEeCCCCHHHHHHHHHHHhcCccccCC--CCHH
Q psy14281 74 SFTDVTLA-CEGQTCKAHKMVLSA-CSPYFKTLLEEN----PSKHPIIILKDVPFKHLTDILEFMYAGEVNVSQ--DQLP 145 (171)
Q Consensus 74 ~~~Dv~i~-~~~~~~~~Hk~iLaa-~S~~F~~~f~~~----~~~~~~i~l~~v~~~~~~~lL~~iYtg~~~~~~--~~~~ 145 (171)
.+.|++-. +||..|..-..-|.. .-..+..||.+. ........| +-+-..|+.+|+|+-+....++. .++.
T Consensus 6 ~~~~~v~lnvGG~~ytt~l~tL~~~~ds~L~~~f~~~~~~~~d~~g~~fI-DRDG~lFRyvL~~LRt~~l~lpe~f~e~~ 84 (221)
T KOG2723|consen 6 EYPDVVELNVGGAIYTTRLGTLTKFPDSMLARMFSGELPLLRDSKGRYFI-DRDGFLFRYVLDYLRTKALLLPEDFAEVE 84 (221)
T ss_pred ccCCceeeccCCeEEEeeccceeechHHHHHhhcCCCCCccccccccEEE-cCCcchHHHHHHHhcccccccchhhhhHH
Confidence 34555544 555544433332443 345567777654 111122222 34567899999999986666666 5688
Q ss_pred HHHHHhhhcCccchHhhhhh
Q psy14281 146 SFLKTADRLKIKGLAEAPQS 165 (171)
Q Consensus 146 ~ll~~A~~~~i~~L~~~c~~ 165 (171)
.+..-|++|+++.+..++.+
T Consensus 85 ~L~rEA~f~~l~~~~~~l~~ 104 (221)
T KOG2723|consen 85 RLVREAEFFQLEAPVTYLLN 104 (221)
T ss_pred HHHHHHHHHccccHHHHHhc
Confidence 99999999999988876654
No 31
>KOG2832|consensus
Probab=87.38 E-value=0.13 Score=42.17 Aligned_cols=41 Identities=44% Similarity=0.627 Sum_probs=34.8
Q ss_pred CCCCCchhhhHHhhhhccccChHHHHHhhhccCCCCccccc
Q psy14281 1 VAEKSPEDVRQILSYYKQFSDPLENFRDSQRKLPELPEISK 41 (171)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~q~~~~~~~~~~~ 41 (171)
|+..+++|||-+++++.+..||.++|+..|+++.++...+.
T Consensus 328 ia~~~~eDvR~vL~~y~~~~D~~~~F~~rqk~l~eq~~~~~ 368 (393)
T KOG2832|consen 328 IAQQQVEDVRPVLQSYSQEKDPAKEFRDRQKKLQEQQYESE 368 (393)
T ss_pred HHHccHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999998885544333
No 32
>PF01466 Skp1: Skp1 family, dimerisation domain; InterPro: IPR016072 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex []. It was found to bind several F-box containing proteins (e.g., Cdc4, Skp2, cyclin F) and to be involved in the ubiquitin protein degradation pathway. A yeast homologue of SKP1 (P52286) was identified in the centromere bound kinetochore complex [] and is also involved in the ubiquitin pathway []. In Dictyostelium discoideum (Slime mold) FP21 was shown to be glycosylated in the cytosol and has homology to SKP1 []. This entry represents a dimerisation domain found at the C-terminal of SKP1 proteins [], as well as in subunit D of the centromere DNA-binding protein complex Cbf3 []. This domain is multi-helical in structure, and consists of an interlocked herterodimer in F-box proteins.; GO: 0006511 ubiquitin-dependent protein catabolic process; PDB: 2P1O_A 3OGL_G 3OGM_A 3C6O_A 2P1N_A 2P1Q_A 3OGK_I 3C6N_A 3C6P_A 2P1P_A ....
Probab=78.67 E-value=0.84 Score=29.01 Aligned_cols=27 Identities=33% Similarity=0.418 Sum_probs=21.7
Q ss_pred CCCCHHHHHHHhhhcCccchHhhhhhh
Q psy14281 140 SQDQLPSFLKTADRLKIKGLAEAPQSS 166 (171)
Q Consensus 140 ~~~~~~~ll~~A~~~~i~~L~~~c~~~ 166 (171)
....+.+|+.+|.+++|+.|.++|...
T Consensus 12 ~~~~L~~l~~AA~yL~I~~L~~~~~~~ 38 (78)
T PF01466_consen 12 DNDELFDLLNAANYLDIKGLLDLCCKY 38 (78)
T ss_dssp -HHHHHHHHHHHHHHT-HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcchHHHHHHHHH
Confidence 445688999999999999999998763
No 33
>PF09593 Pathogen_betaC1: Beta-satellite pathogenicity beta C1 protein; InterPro: IPR018583 Cotton leaf-curl disease - CLCuD - is of major economic importance in cotton-growing areas of the far-east. The infectious agent appears to be a single-stranded DNA molecule of approx 1350 nucleotides in length, which, when inoculated with the Begomovirus into cotton, induces symptoms typical of CLCuD. This molecule requires the Begomovirus for replication and encapsidation []. DNA beta encodes a single protein, betaC1. The intracellular distribution of betaC1 is consistent with the hypothesis that it has a role in transporting the DNA A of Begomovirus from the nuclear site of replication to the plasmodesmatal exit sites of the infected cell. The DNA beta-encoded protein, betaC1, is the determinant of both pathogenicity and suppression of gene silencing [].
Probab=61.36 E-value=48 Score=22.93 Aligned_cols=74 Identities=20% Similarity=0.193 Sum_probs=43.6
Q ss_pred CCEEEEeehhhhcccChhHHhccccCCCCCceEEeC-C--CCHHHHHHHHHHHhcCccccCCCCHHHHHHHhhhcCcc
Q psy14281 83 EGQTCKAHKMVLSACSPYFKTLLEENPSKHPIIILK-D--VPFKHLTDILEFMYAGEVNVSQDQLPSFLKTADRLKIK 157 (171)
Q Consensus 83 ~~~~~~~Hk~iLaa~S~~F~~~f~~~~~~~~~i~l~-~--v~~~~~~~lL~~iYtg~~~~~~~~~~~ll~~A~~~~i~ 157 (171)
++..+.+|--+++++||.+...=.--+-....+..| + --.+.....++++|.|.- +..-.-.++..+-|.+-|+
T Consensus 20 ~~~~i~V~i~l~ST~sP~l~k~~f~IpY~~~~ii~PFDFNglEe~I~~~l~~mY~~s~-~~efk~EDmve~IDIlmme 96 (117)
T PF09593_consen 20 EDMSIFVHIQLFSTRSPALIKKKFIIPYTHEGIIPPFDFNGLEEGIKNTLKIMYKDSK-IEEFKQEDMVEAIDILMME 96 (117)
T ss_pred CCCEEEEEEEEEECCChHHheEEEEEeccCCCeECCcccCcHHHHHHHHHHHHhCCCC-cccccHHHHHhhhheeeec
Confidence 467899999999999999853311112222223333 2 236789999999997643 2222334455554444333
No 34
>KOG3713|consensus
Probab=55.72 E-value=77 Score=27.37 Aligned_cols=80 Identities=18% Similarity=0.133 Sum_probs=49.6
Q ss_pred eEEEEeCCEEEEeehhhhccc--------------ChhHHhccccCCCCCceEEeCCCCHHHHHHHHHHHhcCccccCCC
Q psy14281 77 DVTLACEGQTCKAHKMVLSAC--------------SPYFKTLLEENPSKHPIIILKDVPFKHLTDILEFMYAGEVNVSQD 142 (171)
Q Consensus 77 Dv~i~~~~~~~~~Hk~iLaa~--------------S~~F~~~f~~~~~~~~~i~l~~v~~~~~~~lL~~iYtg~~~~~~~ 142 (171)
-+++.|||..+..-+..|... .+-++..-.. ....++..+ |-+|.+|..+++|.+||++-.+.+
T Consensus 32 ~i~lNVGG~r~~l~~~tL~~~P~TRL~rL~~~~~~~~~l~~cDdy-d~~~~EyfF-DR~P~~F~~Vl~fYrtGkLH~p~~ 109 (477)
T KOG3713|consen 32 RVRLNVGGTRHELYWSTLKRFPLTRLGRLADCNSHEERLELCDDY-DPVTNEYFF-DRHPGAFAYVLNFYRTGKLHVPAD 109 (477)
T ss_pred EEEEeeCCeeEEehHHHHhhCchhHHHHHHhcccchhhhhhcccc-CcccCeeee-ccChHHHHHHHHHHhcCeeccccc
Confidence 477788998776666555441 1111111111 122344544 467899999999999999977766
Q ss_pred CH-HHHHHHhhhcCccc
Q psy14281 143 QL-PSFLKTADRLKIKG 158 (171)
Q Consensus 143 ~~-~~ll~~A~~~~i~~ 158 (171)
-. ....+--++|+|+.
T Consensus 110 vC~~~F~eEL~yWgI~~ 126 (477)
T KOG3713|consen 110 VCPLSFEEELDYWGIDE 126 (477)
T ss_pred cchHHHHHHHHHhCCCh
Confidence 54 34555667787765
No 35
>KOG1778|consensus
Probab=51.44 E-value=3 Score=33.96 Aligned_cols=57 Identities=26% Similarity=0.374 Sum_probs=41.2
Q ss_pred EEEeCCEEEEeehhhhcccChhHHhccccC--CCCCceEEeCCCCHHHHHHHHHHHhcC
Q psy14281 79 TLACEGQTCKAHKMVLSACSPYFKTLLEEN--PSKHPIIILKDVPFKHLTDILEFMYAG 135 (171)
Q Consensus 79 ~i~~~~~~~~~Hk~iLaa~S~~F~~~f~~~--~~~~~~i~l~~v~~~~~~~lL~~iYtg 135 (171)
++..+...+++|+.+|+..|+.|..+.... .+....+.+..++...+..+.+++|..
T Consensus 30 ~~~~~~~~~~~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~l~~~ 88 (319)
T KOG1778|consen 30 IVTDVKDLIPAHSLVLGPASPVFKKVLKQPCRKSLVKGNKILGVPCKAVNVFIRFLYSS 88 (319)
T ss_pred hhhhhhhhhHHHHhcccccchHHHHHHhhhcchhhhhcceeecccccccchhhhhhccc
Confidence 333455678999999999999998776655 233345666667777888888888865
No 36
>PHA02790 Kelch-like protein; Provisional
Probab=31.33 E-value=57 Score=27.90 Aligned_cols=31 Identities=3% Similarity=-0.008 Sum_probs=26.9
Q ss_pred ccCCCCHHHHHHHhhhcCccchHhhhhhhhc
Q psy14281 138 NVSQDQLPSFLKTADRLKIKGLAEAPQSSVK 168 (171)
Q Consensus 138 ~~~~~~~~~ll~~A~~~~i~~L~~~c~~~~~ 168 (171)
.+..+|..+++.+|+.|++++|.+.+..++.
T Consensus 119 ~l~~~NCl~i~~~A~~y~~~~L~~~a~~fi~ 149 (480)
T PHA02790 119 DFRKEYCVECYMMGIEYGLSNLLCHTKDFIA 149 (480)
T ss_pred hCCcchHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 5778899999999999999999998876543
No 37
>KOG3863|consensus
Probab=26.94 E-value=8.1 Score=34.06 Aligned_cols=38 Identities=32% Similarity=0.552 Sum_probs=32.1
Q ss_pred HHHHhhCCCceeEEEEeCCEEEEeehhhhcccChhHHhccccC
Q psy14281 66 FKHLRNDNSFTDVTLACEGQTCKAHKMVLSACSPYFKTLLEEN 108 (171)
Q Consensus 66 l~~~~~~~~~~Dv~i~~~~~~~~~Hk~iLaa~S~~F~~~f~~~ 108 (171)
++..+.....||+++.+.++.|.+|+ ++.||.....+.
T Consensus 5 ~~~qr~~~~~~~~~~~~~~~~f~~~~-----~~e~~~~~~~G~ 42 (604)
T KOG3863|consen 5 LNDQRKKDVLCDVTAFVERQGFRAHR-----CSEYFTSRIVGQ 42 (604)
T ss_pred ccccccccccchhHHHHhccccccee-----ccchhhhhhccc
Confidence 45567778899999999999999999 889998776665
No 38
>KOG4350|consensus
Probab=24.06 E-value=38 Score=28.78 Aligned_cols=69 Identities=19% Similarity=0.157 Sum_probs=43.3
Q ss_pred ChhHHhccccCCCCCceEEeCCCCHHHHHHHHHHH--hcC-cc----------ccCCCCHHHHHHHhhhcCccchHhhhh
Q psy14281 98 SPYFKTLLEENPSKHPIIILKDVPFKHLTDILEFM--YAG-EV----------NVSQDQLPSFLKTADRLKIKGLAEAPQ 164 (171)
Q Consensus 98 S~~F~~~f~~~~~~~~~i~l~~v~~~~~~~lL~~i--Ytg-~~----------~~~~~~~~~ll~~A~~~~i~~L~~~c~ 164 (171)
+.-|+.++..- ....+.+.++..+.+-.+|... |.- ++ -+..+|+.-++.+|.+|++++|.+.|-
T Consensus 93 ~eAF~~lLrYi--Ytg~~~l~~~~ed~lld~LslAh~Ygf~~Le~aiSeYl~~iL~~~NvCmifdaA~ly~l~~Lt~~C~ 170 (620)
T KOG4350|consen 93 SEAFRALLRYI--YTGKIDLAGVEEDILLDYLSLAHRYGFIQLETAISEYLKEILKNENVCMIFDAAYLYQLTDLTDYCM 170 (620)
T ss_pred HHHHHHHHHHH--hhcceecccchHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHcccceeeeeeHHHHhcchHHHHHHH
Confidence 44555554432 2245777777776555554433 211 01 234577888899999999999999997
Q ss_pred hhhc
Q psy14281 165 SSVK 168 (171)
Q Consensus 165 ~~~~ 168 (171)
.+.-
T Consensus 171 mfmD 174 (620)
T KOG4350|consen 171 MFMD 174 (620)
T ss_pred HHHh
Confidence 6443
No 39
>PF10905 DUF2695: Protein of unknown function (DUF2695); InterPro: IPR024248 This bacterial family of proteins has no known function.
Probab=22.89 E-value=97 Score=18.20 Aligned_cols=21 Identities=14% Similarity=0.355 Sum_probs=15.6
Q ss_pred HHHHHHHhhCCCceeEEEEeC
Q psy14281 63 VTSFKHLRNDNSFTDVTLACE 83 (171)
Q Consensus 63 ~~~l~~~~~~~~~~Dv~i~~~ 83 (171)
...+.-+.++|-+||+.|..+
T Consensus 33 ~~vl~~l~~nGg~CDCEVl~N 53 (53)
T PF10905_consen 33 EDVLEWLRENGGYCDCEVLYN 53 (53)
T ss_pred HHHHHHHHHcCCCcceeeecC
Confidence 445566778899999988653
No 40
>KOG3342|consensus
Probab=22.70 E-value=44 Score=24.37 Aligned_cols=17 Identities=24% Similarity=0.516 Sum_probs=13.3
Q ss_pred EEEEeCCEEEE-eehhhh
Q psy14281 78 VTLACEGQTCK-AHKMVL 94 (171)
Q Consensus 78 v~i~~~~~~~~-~Hk~iL 94 (171)
+++.++|++++ +||+|-
T Consensus 84 vVf~vegR~IPiVHRviK 101 (180)
T KOG3342|consen 84 VVFKVEGREIPIVHRVIK 101 (180)
T ss_pred EEEEECCccCchhHHHHH
Confidence 45578999988 688884
No 41
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=21.94 E-value=1.6e+02 Score=20.21 Aligned_cols=71 Identities=21% Similarity=0.243 Sum_probs=40.7
Q ss_pred cccHHHHHHHHHHHhhCCCceeEEEEeCCEEE----------------Eee--hhhhcccChhHHhccccCCCCCceEEe
Q psy14281 56 NDFQSNMVTSFKHLRNDNSFTDVTLACEGQTC----------------KAH--KMVLSACSPYFKTLLEENPSKHPIIIL 117 (171)
Q Consensus 56 ~~~~~~l~~~l~~~~~~~~~~Dv~i~~~~~~~----------------~~H--k~iLaa~S~~F~~~f~~~~~~~~~i~l 117 (171)
++....+.+.++++.++ +|++|..+|.-. ..| +.-+.-.++.+-... .+...+.+
T Consensus 42 ~Dd~~~i~~~i~~~~~~---~DlvittGG~g~g~~D~t~~ai~~~g~~~~~g~~~~~~pg~~~~~~~~----~~~~i~~L 114 (133)
T cd00758 42 PDDADSIRAALIEASRE---ADLVLTTGGTGVGRRDVTPEALAELGEREAHGKGVALAPGSRTAFGII----GKVLIINL 114 (133)
T ss_pred CCCHHHHHHHHHHHHhc---CCEEEECCCCCCCCCcchHHHHHHhcCEEeccCcccccCCCceEEEEE----CCEEEEEC
Confidence 56777888888888765 799999977422 222 222222222111111 22346777
Q ss_pred CCCCHHHHHHHHHHHh
Q psy14281 118 KDVPFKHLTDILEFMY 133 (171)
Q Consensus 118 ~~v~~~~~~~lL~~iY 133 (171)
|+.+..++..+..|++
T Consensus 115 PG~p~a~~~~~~~~v~ 130 (133)
T cd00758 115 PGSPKSALTTFEALVL 130 (133)
T ss_pred CCCHHHHHHHHHHhhe
Confidence 8877776666655543
No 42
>PHA03098 kelch-like protein; Provisional
Probab=20.87 E-value=63 Score=27.78 Aligned_cols=31 Identities=10% Similarity=0.041 Sum_probs=26.9
Q ss_pred ccCCCCHHHHHHHhhhcCccchHhhhhhhhc
Q psy14281 138 NVSQDQLPSFLKTADRLKIKGLAEAPQSSVK 168 (171)
Q Consensus 138 ~~~~~~~~~ll~~A~~~~i~~L~~~c~~~~~ 168 (171)
.++.+|+..++.+|+.|+.+.|.+.|.+++.
T Consensus 104 ~l~~~nc~~~~~~a~~~~~~~L~~~~~~~i~ 134 (534)
T PHA03098 104 IIDDNNCIDIYRFSFFYGCKKLYSAAYNYIR 134 (534)
T ss_pred hCCHhHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 3677899999999999999999999987543
No 43
>PF06404 PSK: Phytosulfokine precursor protein (PSK); InterPro: IPR009438 This family consists of several plant specific phytosulfokine precursor proteins. Phytosulfokines, are active as either a pentapeptide or a C-terminally truncated tetrapeptide. These compounds were first isolated because of their ability to stimulate cell division in somatic embryo cultures of Asparagus officinalis [].; GO: 0008083 growth factor activity, 0008283 cell proliferation, 0005576 extracellular region
Probab=20.79 E-value=35 Score=21.92 Aligned_cols=13 Identities=23% Similarity=0.613 Sum_probs=8.6
Q ss_pred HHHHHHHHHhcCc
Q psy14281 124 HLTDILEFMYAGE 136 (171)
Q Consensus 124 ~~~~lL~~iYtg~ 136 (171)
++.+=++||||..
T Consensus 66 tL~AHlDYIYTQ~ 78 (81)
T PF06404_consen 66 TLAAHLDYIYTQH 78 (81)
T ss_pred HHHHHhhheeccC
Confidence 3445578888864
Done!