BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14282
(119 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O15943|CADN_DROME Neural-cadherin OS=Drosophila melanogaster GN=CadN PE=1 SV=2
Length = 3097
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
Query: 2 ALYPPGTSNLPTLI-YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEEL 60
A+Y G + T YEL L ASD+L EN TTV+IH+ DVND PPVF Y + EE
Sbjct: 1468 AIYVAGALDYETRRRYELRLAASDNLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEED 1527
Query: 61 PGPYPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
P +L+V ATDGDKDR NIVYFLTGQGID DNP NSKFDINRTTGEIF
Sbjct: 1528 DRNLPKRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEIF 1580
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 19/109 (17%)
Query: 16 YELTLVASD----------SLNENKTTVVIHINDVNDMPPVFN--TSLYPAIMEEELPGP 63
YEL + A D +++ + VV+ I DVND PVF ++ YP + EE P
Sbjct: 927 YELNVTAMDDGSCCVNGDQTIHTSTAVVVVFITDVNDNKPVFKDCSTYYPKV-EEGAPNG 985
Query: 64 YPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
P ++KV+ATD DK + Y + Q N +KF ++ TGE+
Sbjct: 986 SP--VIKVVATDEDKGVNGQVKYSIVQQ----PNQKGTKFTVDEETGEV 1028
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 29 NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFL 88
++ TV I + DVND P+F ++E E P + +V A D D NN VY+
Sbjct: 1281 SEATVYIMLEDVNDEIPLFTEREQETVLEGE---PIGTKVTQVNAIDKDGTFPNNQVYYY 1337
Query: 89 TGQGIDA-DNPGNSKFDINRTTGEIF 113
+D+ N G F+IN +GEIF
Sbjct: 1338 I---VDSPRNEGKEFFEINLQSGEIF 1360
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 18 LTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74
+T+ A+D + E + + I DVND PP+F+ Y ++++ ++L+V A+
Sbjct: 1046 VTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQD--ASIGTNILRVSAS 1103
Query: 75 DGDKDRQNNIVYFLTG 90
D D D IVY LT
Sbjct: 1104 DEDADNNGAIVYSLTA 1119
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92
+ I I D ND PP F+ SLY A ++E H++L V A D D + I Y +T
Sbjct: 1400 IRIGIADKNDNPPYFDKSLYEAEVDEN--EDIQHTVLTVTAK--DHDESSRIRYEITSGN 1455
Query: 93 IDADNPGNSKFDINRTTGEIFFA 115
I F + TG I+ A
Sbjct: 1456 I------GGAFAVKNMTGAIYVA 1472
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 15 IYELTLVASDSLNENKTTV--VIHINDVNDMPPVFNTSLYPAI-MEEELPGPYPHSLLKV 71
+Y L + A++ T+V I + DVND P F Y A ++E++ P S+L+V
Sbjct: 722 VYSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDI--PLGTSILRV 779
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPG 99
A D D I Y ++ D+ G
Sbjct: 780 KAMDSDSGSNAEIEYLVSDDHFAVDSNG 807
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 16 YELTLVASDSLNENKT---TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
+++ ++A D + KT T+ + + D+ND P F P ++ E +P P ++++L
Sbjct: 1932 HQVKILAIDDGSPPKTATATLTVIVQDINDNAPKFLKDYRP-VLPEHVP---PRKVVEIL 1987
Query: 73 ATDGDKDRQNN 83
ATD D ++N
Sbjct: 1988 ATDDDDRSKSN 1998
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 3 LYPPGTSNLPTLIYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPG 62
L P T + +I + A +N+ V+I + DVND PP F P +L
Sbjct: 500 LGPEKTIDFWVIITNMGHNAGIKYTDNQR-VIILVKDVNDEPPYFINRPLPMQAVVQLNA 558
Query: 63 PYPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTG 110
P + + A D D D +NI YF+ D G +F+++ +G
Sbjct: 559 PPNTPVFTLQARDPDTD--HNIHYFIV-----RDRTG-GRFEVDERSG 598
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
Query: 16 YELTLVASDSLNENKT-TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74
Y + +VA D T T I + D+NDMPP F + ++E P + + T
Sbjct: 1710 YSIQVVAMDGGGLKGTGTASIRVKDINDMPPQFTKDEWFTEVDETDGTALPEMPI-LTVT 1768
Query: 75 DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINR 107
D+D N Y + ID G KF + R
Sbjct: 1769 VHDEDETNKFQYKV----IDNSGYGADKFTMVR 1797
>sp|Q9VJB6|CADN2_DROME Putative neural-cadherin 2 OS=Drosophila melanogaster GN=CadN2 PE=3
SV=2
Length = 2215
Score = 119 bits (297), Expect = 8e-27, Method: Composition-based stats.
Identities = 60/98 (61%), Positives = 69/98 (70%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATD 75
YEL L A+ + N TTVVI++ DVND PPVF+ Y + EE P +L+V ATD
Sbjct: 218 YELRLEATRNRKNNYTTVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQVTATD 277
Query: 76 GDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
GD DR NIVYFLTGQGID DNP NSKFDINRTTG+IF
Sbjct: 278 GDVDRPINIVYFLTGQGIDPDNPANSKFDINRTTGDIF 315
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 16 YELTLVASDSLNENKT-TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74
Y + +VA D T T I + D+NDMPP F + ++E G Y + T
Sbjct: 502 YSIQVVAMDGGGLKGTGTASIRVKDLNDMPPQFTKDEWVTEVDET-NGTYIPETPILTVT 560
Query: 75 DGDKDRQNNIVY-FLTGQGIDAD 96
D+D N Y + G AD
Sbjct: 561 VQDEDETNTFQYKVVPNSGFGAD 583
>sp|Q967F4|HMR1_CAEEL Cadherin-related hmr-1 OS=Caenorhabditis elegans GN=hmr-1 PE=1 SV=1
Length = 2920
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYP-AIMEEELPGPYPHSLLKVLAT 74
Y L L+ASD + T V IHI DVND P F Y ++EE++ P L V AT
Sbjct: 1405 YHLVLIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDV--DIPKVLFNVHAT 1462
Query: 75 DGDKD-RQNNIVYFLTGQGID 94
D D+D + + IVY L GQG D
Sbjct: 1463 DADQDEKSSRIVYRLEGQGAD 1483
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 14/108 (12%)
Query: 16 YELTLVASD--SLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPH------- 66
Y LTL A+D S + T V+ + DVND+ P F L+ ++EE+ P H
Sbjct: 1178 YTLTLTATDMTSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMT-PNEHLEKTNGK 1236
Query: 67 SLLKVLATDGDKDR-QNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
++ V A D D D QN + Y + G+ A+ F I+ TGEIF
Sbjct: 1237 PIVTVKAIDTDSDGPQNEVHYRIVGE---ANGEETKHFRIDELTGEIF 1281
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 14/102 (13%)
Query: 11 LPTLIYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK 70
LP L ++L + A + E+ + I I+DVND P F LY A + E++ P ++LK
Sbjct: 607 LPKL-HKLKVTAREDNRESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDI--PLNQTILK 663
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
V A D D + I Y + N F IN + GEI
Sbjct: 664 VTAVDKDTGDNSRITYSVD----------NHNFSIN-SNGEI 694
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
Query: 15 IYELTLVASDSL----------NENKTTVVIHINDVNDMPPVFNTSLY-PAIMEEELPGP 63
+Y LT+ ASD N++ V I INDVND P F Y + E E G
Sbjct: 1293 MYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEG- 1351
Query: 64 YPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
H ++ + A D DK +N+ Y L G G G F + +G IF
Sbjct: 1352 --HDVITIKAHDLDK--HSNLRYHLIGAG-----GGRIPFGVRTDSGTIF 1392
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 36/99 (36%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92
V +++ D+ND P+F L+ I E P + +DG VYF+ Q
Sbjct: 1532 VQVNVRDINDNSPIFPERLFGYIEENREP----------IHSDG--------VYFMDVQA 1573
Query: 93 IDADNP------------------GNSKFDINRTTGEIF 113
D D+P G S F I++ TG+IF
Sbjct: 1574 RDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIF 1612
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 32 TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPY---PHSLLKVLATDGDKDRQNNIVYFL 88
T++I I DVN+ P F + + + + G Y P +++KV ATD D +IVY L
Sbjct: 850 TLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSL 909
Query: 89 TGQGIDADNPGNSKFDINRTTGEIFFAPLI 118
+ F I+R TG + +P +
Sbjct: 910 ----YYTQSESRKAFVIDRQTGVLTPSPHV 935
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 27 NENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY 86
E V I + D+ND P F + Y +EE P +++ A D D++ ++N+
Sbjct: 1641 REGFANVTIKVTDMNDNAPFFEKTRYEGSVEE--TAPIGAAVMSFSAFDADEEAKDNVFT 1698
Query: 87 F 87
+
Sbjct: 1699 Y 1699
>sp|Q96JP9|CDHR1_HUMAN Cadherin-related family member 1 OS=Homo sapiens GN=CDHR1 PE=1 SV=2
Length = 859
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 20 LVASDSLNENKTTVVIHINDVNDMPPVF-NTSLYPAIMEEELPGPYPHSLLKVLATDGDK 78
L +D + TTV +++ DV DM PVF T Y + E+ LPG +LKV+A DGD+
Sbjct: 219 LHGADVVFSATTTVTVNVEDVQDMAPVFVGTPYYGYVYEDTLPG---SEVLKVVAMDGDR 275
Query: 79 DRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
+ N I+Y L N + F+IN T+G I
Sbjct: 276 GKPNRILYSLV-------NGNDGAFEINETSGAI 302
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92
V I + DVND PP F S+ M P +K+ A D D + NN+V +
Sbjct: 562 VFITLLDVNDHPPQFGKSVQKKTMVLGTP-------VKIEAIDEDAEEPNNLVDY----S 610
Query: 93 IDADNPGNSKFDINRTTGEIFF 114
I P N FDIN TGEI+
Sbjct: 611 ITHAEPANV-FDINSHTGEIWL 631
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 17 ELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDG 76
E + SD LN VVI + D ND P F Y A++ E++P + KV A D
Sbjct: 105 EAIISISDGLNLVAEKVVILVTDANDEAPRFIQEPYVALVPEDIPA--GSIIFKVHAVDR 162
Query: 77 DKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTG 110
D ++ YFL +S F ++R +G
Sbjct: 163 DTGSGGSVTYFLQNL--------HSPFAVDRHSG 188
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92
VVI + D ND P F++ Y A + E PG S++ V A D D + Y G G
Sbjct: 458 VVIQLLDTNDNVPKFDSLYYVARIPENAPG--GSSVVAVTAVDPDTGPWGEVKYSTYGTG 515
Query: 93 IDADNPGNSKFDINRTTGEIFFAPL 117
D F I+ +TG I+ P
Sbjct: 516 ADL-------FLIHPSTGLIYTQPW 533
>sp|Q9VGW1|CAD86_DROME Cadherin-86C OS=Drosophila melanogaster GN=Cad86C PE=2 SV=3
Length = 1943
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 15 IYELTLVA--------SDSLNENKTTVVIHINDVNDMPPVFN-----TSLYPAIMEEELP 61
+Y LT++A DS N +V+ + DV D PPVF T L P I LP
Sbjct: 326 MYHLTILANDAYAEPGQDSRNIAGMEIVVIVQDVQDQPPVFTSAPPVTKLPPGI----LP 381
Query: 62 GPYPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFF 114
G +L+V A DGDK + Y L + +NP S FDIN T+GEIF
Sbjct: 382 G---DKILQVHAEDGDKGNPREVRYGL----VSENNPFTSFFDINETSGEIFL 427
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 16 YELTLVASDSLNE-NKTTV--VIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y L + A D E N+ V +I + DVND P+F+ LY I+ +L G +++
Sbjct: 674 YHLYVEARDMDGEGNRAQVPLIIKLIDVNDETPIFDKDLYEFILTHDLMGFTTTAVIH-- 731
Query: 73 ATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLIY 119
A D D NN V + G + DN +F +++ TGE+ I+
Sbjct: 732 AEDKDATAPNNEVRYEIING-NYDN----QFVLDKVTGELTVREKIH 773
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATD-----GDKDRQNNIVYF 87
V ++INDVND PVF Y + E + +++VLATD G K R I+ +
Sbjct: 586 VTVYINDVNDNAPVFEQPAYSVELPENMTAGT--KVVQVLATDPDSGLGGKVRYTAILGY 643
Query: 88 L-TGQGIDAD 96
L T +DA+
Sbjct: 644 LNTSLNLDAE 653
>sp|Q8WN91|CDHR1_BOVIN Cadherin-related family member 1 OS=Bos taurus GN=CDHR1 PE=2 SV=1
Length = 867
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 20 LVASDSLNENKTTVVIHINDVNDMPPVF-NTSLYPAIMEEELPGPYPHSLLKVLATDGDK 78
L +D + T V +++ DV DM PVF T Y + E+ LPG +L V+A DGD+
Sbjct: 220 LRGADVVLSATTVVTVNVEDVQDMGPVFVGTPYYGYVYEDTLPG---SEVLMVVAMDGDR 276
Query: 79 DRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
+ N ++Y L N + F+IN T+G I
Sbjct: 277 GKPNRVLYSLV-------NGSDGAFEINETSGAI 303
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92
V I + DVND P F S+ M P +K+ ATD D + NN+V +
Sbjct: 563 VFITLLDVNDHYPQFGKSVQEKTMVLGTP-------VKIEATDQDAEEPNNLVDY----S 611
Query: 93 IDADNPGNSKFDINRTTGEIFF 114
I P N FDIN TGEI+
Sbjct: 612 ITHAEPANV-FDINAHTGEIWL 632
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92
VVI + D ND P F + Y A + E PG ++L V A D D + Y + G G
Sbjct: 459 VVIQLLDTNDNVPKFTSHYYVARIPENAPG--GSNVLAVTAVDPDSGPWGEVKYSIYGSG 516
Query: 93 IDADNPGNSKFDINRTTGEIFFAPL 117
D F I+ ++G I+ P
Sbjct: 517 ADL-------FLIHPSSGIIYTQPW 534
>sp|Q91XU7|CDHR1_RAT Cadherin-related family member 1 OS=Rattus norvegicus GN=Cdhr1 PE=2
SV=1
Length = 859
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 20 LVASDSLNENKTTVVIHINDVNDMPPVF-NTSLYPAIMEEELPGPYPHSLLKVLATDGDK 78
L +D + TTV I++ DV D P+F T Y + E+ LPG +L V+A DGD+
Sbjct: 220 LRGADVVFSATTTVTINVEDVQDTAPIFVGTPYYGYVYEDTLPG---SEVLTVVAIDGDR 276
Query: 79 DRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
+ N+I+Y L N + F+IN T+G I
Sbjct: 277 GKPNHILYRLL-------NESDGLFEINETSGAI 303
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 17 ELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDG 76
E + SD LN VVI + D ND P F Y ++ E P S+ KV A D
Sbjct: 105 EAIISISDGLNLVAEKVVIVVTDANDEAPRFLQEPYNILVPENTPA--GSSIFKVQAEDK 162
Query: 77 DKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTG 110
D ++ YFL Q + + SKF ++R +G
Sbjct: 163 DTGSGGSVTYFL--QSLHS-----SKFTVDRHSG 189
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92
+VI + D ND P F + Y A + E +PG +++ V A D D + Y + G G
Sbjct: 459 IVIQLLDTNDNVPKFTSHYYIARIPENVPG--GSNVVAVTAVDPDTGPWGKVQYSIYGTG 516
Query: 93 IDADNPGNSKFDINRTTGEIFFAPL 117
D F I+ +TG I+ P
Sbjct: 517 SDL-------FLIHPSTGLIYTQPW 534
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92
V + + DVND P F S+ M P LK+ ATD D + NN+V +
Sbjct: 563 VFVTLLDVNDHYPQFVQSVQEKTMVLGTP-------LKIEATDQDAEEPNNLVDY----S 611
Query: 93 IDADNPGNSKFDINRTTGEI 112
I P N FDI+ TGEI
Sbjct: 612 ITRAEPVNV-FDIDAHTGEI 630
>sp|Q8VHP6|CDHR1_MOUSE Cadherin-related family member 1 OS=Mus musculus GN=Cdhr1 PE=1 SV=1
Length = 859
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 20 LVASDSLNENKTTVVIHINDVNDMPPVF-NTSLYPAIMEEELPGPYPHSLLKVLATDGDK 78
L +D + TTV I++ DV D P+F T Y + E+ LPG +L V+A DGD+
Sbjct: 220 LRGADMVFSATTTVTINVEDVQDTAPIFVGTPYYGYVYEDTLPG---SEVLTVVAIDGDR 276
Query: 79 DRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
+ N+I+Y L N + F+IN T+G I
Sbjct: 277 GKPNHILYRLL-------NESDGIFEINETSGAI 303
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Query: 17 ELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDG 76
E + SD LN VVI + D ND P F Y + E +P S+ KV A D
Sbjct: 105 EAIISISDGLNLVAEKVVILVTDANDEAPRFIQEPYIIRVPENIPA--GSSIFKVQAEDK 162
Query: 77 DKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTG 110
D ++ Y L N +SKF ++R +G
Sbjct: 163 DTGSGGSVTYSL-------QNLHSSKFSMDRHSG 189
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92
V + + DVND P F S+ M P LK+ ATD D + NN+V +
Sbjct: 563 VFVTLLDVNDHYPQFVQSVQEKTMVLGTP-------LKIEATDQDAEEPNNLVDY----S 611
Query: 93 IDADNPGNSKFDINRTTGEI 112
I P N FDI+ TGEI
Sbjct: 612 ITRAEPVNV-FDIDAHTGEI 630
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92
+VI + D ND P F + Y A + E PG +++ V A D D + Y + G G
Sbjct: 459 IVIQLLDTNDNVPKFTSHYYIARIPENAPG--GSNVVAVTAVDPDTGPWGKVHYSIYGTG 516
Query: 93 IDADNPGNSKFDINRTTGEIFFAPL 117
D F I+ +TG I+ P
Sbjct: 517 SDL-------FLIHPSTGLIYTQPW 534
>sp|Q8UVJ7|CDHR1_CHICK Cadherin-related family member 1 OS=Gallus gallus GN=CDHR1 PE=2
SV=1
Length = 865
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
Query: 31 TTVVIHINDVNDMPPVF-NTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLT 89
TTV +++ DV D PP+F T Y + E+ LPG +L V+A DGD+ + NNI Y +
Sbjct: 233 TTVTVNVEDVQDTPPMFIGTPYYGYVYEDTLPGS---EVLTVVALDGDRGKPNNIHYCIV 289
Query: 90 GQGIDADNPGNSKFDINRTTGEI 112
N F+I+ TTG I
Sbjct: 290 -------NGSEGSFEISNTTGAI 305
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 17 ELTLVASDSLNENKTTVVIHINDVNDMPPVF-NTSLYPAIMEEELPGPYPHSLLKVLATD 75
E+ + SD L+ V I + D ND P F NT P I++ P S+ K+ A D
Sbjct: 107 EVIVSISDGLSTVSEKVRILVMDANDESPEFINT---PYIVQVPENSPSGSSIFKIEAVD 163
Query: 76 GDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTG 110
D +I YFL Q I A+ KF I+R +G
Sbjct: 164 RDTGSGGSITYFL--QNIHAN-----KFTIDRHSG 191
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92
V I + DVND P FN ++ M P +K+ A D D + NNIV + Q
Sbjct: 565 VFITVLDVNDHSPEFNENIQEKTMIIGSP-------VKIEAIDQDAEEPNNIVDYSIMQA 617
Query: 93 IDADNPGNSKFDINRTTGEIFFAPLI 118
+P N FDI+++TGEI I
Sbjct: 618 ----DPANV-FDIDQSTGEIKLKSYI 638
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92
+ I + D ND P F++ Y A + E PG +++ V ATD D + Y + G G
Sbjct: 461 IAIRLLDTNDNVPKFSSDYYIARIPENSPG--GSNVVAVTATDPDSGLWGEVKYSIYGTG 518
Query: 93 IDADNPGNSKFDINRTTGEIFFAPL 117
D F I+ +TG I+ P
Sbjct: 519 ADL-------FLIHPSTGIIYTQPW 536
>sp|Q9NYQ8|FAT2_HUMAN Protocadherin Fat 2 OS=Homo sapiens GN=FAT2 PE=1 SV=2
Length = 4349
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 13 TLIYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEEL-PGPYPHSLLKV 71
T Y L + ASD + TV I + DVND P + LY + E++ PG H +LKV
Sbjct: 2977 TAKYLLRVTASDGKFQASVTVEIFVLDVNDNSPQCSQLLYTGKVHEDVFPG---HFILKV 3033
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
ATD D D I Y L G PG +F ++ TGE+
Sbjct: 3034 SATDLDTDTNAQITYSLHG-------PGAHEFKLDPHTGEL 3067
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 29 NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFL 88
++ TV + + DVND PP F+ +Y + E LP P ++++LA+D D R ++ Y +
Sbjct: 2254 SEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP--VIQLLASDQDSGRNRDVSYQI 2311
Query: 89 TGQGIDADNPGNSKFDINRTTGEI 112
G D + F IN +TGE+
Sbjct: 2312 VEDGSDV----SKFFQINGSTGEM 2331
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 13 TLIYELTLVASDSLNENKTTVV---IHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLL 69
T +Y++ ++A N + ++V I + DVND PVF Y A++ E + P S++
Sbjct: 2760 TKLYQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADPYKAVLTENM--PVGTSVI 2817
Query: 70 KVLATDGDKDRQNNIVYFLTG 90
+V A D D R + Y L+
Sbjct: 2818 QVTAIDKDTGRDGQVSYRLSA 2838
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 28 ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYF 87
E T VV+HI D ND+ P+F+ Y + E++P P + KV ATD D QN Y+
Sbjct: 129 EALTRVVVHILDQNDLKPLFSPPSYRVTISEDMPLKSP--ICKVTATDADLG-QNAEFYY 185
Query: 88 LTGQGIDADNPGNSKFDINRTTGEIFFA 115
A N + F I+ T+G + A
Sbjct: 186 -------AFNTRSEMFAIHPTSGVVTVA 206
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 28 ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYF 87
+ T VVI I D N+ P+FN S Y ++E +P S+L V ATD D + Y
Sbjct: 439 QASTVVVIDIVDCNNHAPLFNRSSYDGTLDENIPPGT--SVLAVTATDRDHGENGYVTYS 496
Query: 88 LTG 90
+ G
Sbjct: 497 IAG 499
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 28 ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYF 87
++ + VV+ I DVND PP+F+ L+ + E L P + +++A+D D+ + Y
Sbjct: 1223 KSTSRVVVGILDVNDNPPIFSHKLFNVRLPERLSPVSPGPVYRLVASDLDEGLNGRVTYS 1282
Query: 88 LTGQGIDADNPGNSKFDINRTTGEI 112
+ D+D F I+ TG +
Sbjct: 1283 IE----DSD---EEAFSIDLVTGVV 1300
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 33 VVIHINDVNDMPPVFNTSLYP-AIMEEELPGPYPHSLLKVLATDGDKD 79
V+IH+ DVND PP F+ +Y AI+ PG LL V A+D D +
Sbjct: 1858 VIIHVRDVNDSPPRFSEQIYEVAIVGPIHPG---MELLMVRASDEDSE 1902
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 30 KTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLT 89
+T VV++++D+ND PP F Y A + E H +LKV A D D + + Y +
Sbjct: 2362 ETLVVVNVSDINDNPPEFRQPQYEANVSE--LATCGHLVLKVQAIDPDSRDTSRLEYLIL 2419
Query: 90 GQGIDADNPGNSKFDINRTTGEI 112
D F IN ++G I
Sbjct: 2420 SGNQD------RHFFINSSSGII 2436
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 16 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSL-YPAIMEEELPGPYPHSLLKV 71
Y LT++A D + + T V I + D ND PP + ++ YP+I E+ P S+L++
Sbjct: 1103 YWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQED---APVGTSVLQL 1159
Query: 72 LATDGDKDRQNNIVYFLT 89
A D D + + + +T
Sbjct: 1160 DAWDPDSSSKGKLTFNIT 1177
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 17/106 (16%)
Query: 16 YELTLVASDS---LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEEL-PGPYPHSLLKV 71
+ LT++ D + N V IH+ D N PP F Y A + + + PG LL+V
Sbjct: 1521 HTLTVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQLHYEASVPDTIAPGT---ELLQV 1577
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSK--FDINRTTGEIFFA 115
A D D+ + Y L GNS+ F+IN G I A
Sbjct: 1578 RAMDADRGVNAEVHYSLL--------KGNSEGFFNINALLGIITLA 1615
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY 86
TV I + D ND PP F S Y ++ + P +++VLA D D+ + ++ Y
Sbjct: 2569 CTVKIILTDENDNPPQFKASEYTVSIQSNVSKDSP--VIQVLAYDADEGQNADVTY 2622
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 16 YELTLVASDS----LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKV 71
Y L L A+DS L+E+ T + I + DVND PP F Y ++E P +L++
Sbjct: 3392 YSLKLRATDSGQPPLHED-TDIAIQVADVNDNPPRFFQLNYSTTVQEN--SPIGSKVLQL 3448
Query: 72 LATDGD 77
+ +D D
Sbjct: 3449 ILSDPD 3454
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLT 89
TTV+++I DVN+ P F Y ++E L G +L V ATD D ++I Y L
Sbjct: 3305 TTVMVNITDVNEHRPQFPQDPYSTRVLENALVGDV---ILTVSATDEDGPLNSDITYSLI 3361
Query: 90 G 90
G
Sbjct: 3362 G 3362
>sp|Q24298|CADE_DROME DE-cadherin OS=Drosophila melanogaster GN=shg PE=1 SV=2
Length = 1507
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATD 75
YEL + A D + ++ TTVVI I DVND PPVF I+EE Y +L V A D
Sbjct: 592 YELKVRAFDGIYDDYTTVVIKIEDVNDNPPVFKQDYSVTILEETT---YDDCILTVEAYD 648
Query: 76 GD-KDR--QNNIVYFL---TGQGIDADNPG 99
D KDR +IVY + G DN G
Sbjct: 649 PDIKDRNADQHIVYSIHQNDGNRWTIDNSG 678
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 16 YELTLVASDSLN-ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74
Y LT++ ++ + + I + DVND P + I+E E PG +++V A
Sbjct: 380 YTLTMIVRNTHELGTEHQIKIQVEDVNDNIPYYTEVKSGTILENEPPGT---PVMQVRAF 436
Query: 75 DGDKDRQNNIVYF 87
D D NNIV F
Sbjct: 437 DMDGTSANNIVSF 449
>sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2
Length = 4588
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYP-AIMEEELPGPYPHSLLKVLAT 74
Y LT+ A+D +K V + + D ND PV +LY I E+ LPG ++++ AT
Sbjct: 2992 YLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDVLPGKL---IMQISAT 3048
Query: 75 DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
D D I Y L G G + KF +N TGE+
Sbjct: 3049 DADIRSNAEITYTLLGSGAE-------KFKLNPDTGEL 3079
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 16 YELTLVASDSLNENKTTVVIHI--NDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLA 73
Y+L++ A+DSL V + I +D+ND PPVF Y + E S+++V A
Sbjct: 2250 YKLSIRATDSLTGAHAEVFVDIIVDDINDNPPVFAQQSYAVTLSE--ASVIGTSVVQVRA 2307
Query: 74 TDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
TD D + I Y + G + + F ++ +TG I
Sbjct: 2308 TDSDSEPNRGISYQMFGN----HSKSHDHFHVDSSTGLI 2342
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 13 TLIYELTLVASDSLNENKTT----VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSL 68
T Y+ +++A + ++++ V I + D ND PVF +S Y A + E LPG +
Sbjct: 2771 TKWYQFSILARCTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPG--GSRV 2828
Query: 69 LKVLATDGDKDRQNNIVYFL-TGQGIDADNPGNSKFDINRTTGEI 112
+++ A+D D ++Y L Q ++ F IN TG I
Sbjct: 2829 IQIRASDADSGTNGQVMYSLDQSQSVEVIE----SFAINMETGWI 2869
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 16 YELTLVASDSLNE---NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y LT+ ASD+ + N TTV I ++DVND PVF+ Y I++E P + S+L+++
Sbjct: 3406 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGF--SVLQLV 3463
Query: 73 ATDGDKDRQNNIVYFLTGQGID 94
TD D +F G D
Sbjct: 3464 VTDEDSSHNGPPFFFTIVTGND 3485
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 16 YELTLVASD---SLNENKTTVV-IHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKV 71
Y++ +VASD + + T +V + + DVND PP F +Y + E+ P ++L
Sbjct: 2883 YQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPQGGVIAILST 2942
Query: 72 LATDGDKDRQN-NIVYFLTG 90
TD D + N + YF+TG
Sbjct: 2943 --TDADSEEINRQVTYFITG 2960
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 28 ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYF 87
E V +H+ D+ND PPVF LY A + LP ++ V ATD D + ++Y
Sbjct: 1860 EYAANVTVHVIDINDCPPVFAKPLYEASL--LLPTYKGVKVITVNATDADSSAFSQLIYS 1917
Query: 88 LTGQGIDADNPGNSKFDINRTTGEI 112
+T I KF ++ TG +
Sbjct: 1918 ITEGNI------GEKFSMDYKTGAL 1936
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHS-LLKVLAT 74
Y LT+ A+D T V I + D ND P F+TS Y ++ E+ P + +L++ A
Sbjct: 1425 YNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTA---PETEILQISAV 1481
Query: 75 DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
D+D +N ++Y L D KF ++ TG ++
Sbjct: 1482 --DQDEKNKLIYTLQSS---RDPLSLKKFRLDPATGSLY 1515
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 15 IYELTLVASDS-LNENKT---TVVIHINDVNDMPPVFNTSLYPAIMEEE-LPGPYPHSLL 69
+Y L+L A D L T TV++ + D+ND PPVF Y A + E+ L G +L
Sbjct: 3194 VYTLSLKAVDQGLPRRLTATGTVIVSVLDINDNPPVFEYREYGATVSEDILVGT---EVL 3250
Query: 70 KVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFF 114
+V A D + I Y + I + G KF I+ TG +F
Sbjct: 3251 QVYAASRDIEANAEITYSI----ISGNEHG--KFSIDSKTGAVFI 3289
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Query: 16 YELTLVASD----SLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKV 71
Y LT+ A+D SL+ + TV +++ D+ND PVF+ Y ++ E+ S++ V
Sbjct: 3301 YYLTVEATDGGTPSLS-DVATVNVNVTDINDNTPVFSQDTYTTVISED--AVLEQSVITV 3357
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118
+A D D ++I Y + ID N G+S F I+ GE+ L+
Sbjct: 3358 MADDADGPSNSHIHYSI----IDG-NQGSS-FTIDPVRGEVKVTKLL 3398
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 15 IYELTLVASDSLNE-NKTTVVIHINDVNDMPPVFNTSLYP-AIMEEELPGPYPHSLLKVL 72
+Y L + A+D + ++V+ + DVND P F+ Y + E PG L +V
Sbjct: 3092 VYHLLVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTL---LTRVQ 3148
Query: 73 ATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
ATD D I+Y L ID+ + +F IN +G I
Sbjct: 3149 ATDADAGLNRKILYSL----IDS---ADGQFSINELSGII 3181
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 20/108 (18%)
Query: 13 TLIYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSL---- 68
TLI + T +A S N TTV++H+ D ND PVF + Y ++ E +S+
Sbjct: 1734 TLIIQGTNMAGLSTN---TTVLVHLQDENDNAPVFMQAEYTGLISESAS---INSVVLTD 1787
Query: 69 ----LKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
L + A D DKD +VY + + ++ F I+ +TG I
Sbjct: 1788 RNVPLVIRAADADKDSNALLVYHIVEPSV------HTYFAIDSSTGAI 1829
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY-FLTG 90
V + + D+ND PP+F +Y A + E P+ H + V A D D + + Y L+G
Sbjct: 2376 VTVDVTDLNDNPPLFEQQIYEARISEH--APHGHFVTCVKAYDADSSDIDKLQYSILSG 2432
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 14/102 (13%)
Query: 16 YELTLVASDSLNENK---TTVVIHIN--DVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK 70
+ L + A D E +TVV+ ++ DVND PP F Y + E+LP ++
Sbjct: 891 HSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLPEGT--VIMW 948
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
+ A D D + + Y L G GN FD+++ +G +
Sbjct: 949 LEAHDPDLGQSGQVRYSLLDHG-----EGN--FDVDKLSGAV 983
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLT 89
TV + + D ND P F + Y I G S++KVLA+D D+ +I Y
Sbjct: 2580 CTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGT---SVVKVLASDADEGSNADITY--- 2633
Query: 90 GQGIDADNPG-NSKFDINRTTGEI 112
I+AD+ +IN+ +G I
Sbjct: 2634 --AIEADSESVKENLEINKLSGVI 2655
>sp|O88277|FAT2_RAT Protocadherin Fat 2 OS=Rattus norvegicus GN=Fat2 PE=1 SV=1
Length = 4351
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 29 NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFL 88
++ TV + + D+ND PP F+ +Y + E P P ++++LA+D D + ++ Y +
Sbjct: 2254 SEATVEVLVEDINDNPPTFSQLVYTTSVSEGSPAQTP--VIQLLASDQDSGQNQDVSYQI 2311
Query: 89 TGQGIDADNPGNSKFDINRTTGEIF 113
G D + F IN +TGEIF
Sbjct: 2312 VEDGSDV----SKFFRINGSTGEIF 2332
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 25 SLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNI 84
SL + TTV+I I D N+ PVFN S Y ++E +P S+L V ATD D +I
Sbjct: 436 SLGQATTTVIIDIVDCNNHAPVFNRSSYEGTLDENIPPGT--SVLTVTATDQDHGDNGHI 493
Query: 85 VYFLTG 90
Y + G
Sbjct: 494 TYSIAG 499
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEEL-PGPYPHSLLKVLAT 74
Y L + ASD + V + + D+ND P + LY + E++ PG H +LKV A
Sbjct: 2982 YLLRVTASDGKFQASVPVEVFVVDINDNSPQCSQLLYTGKVREDVTPG---HFILKVSAI 3038
Query: 75 DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
D D D I Y L G PG +F ++ TGE+
Sbjct: 3039 DVDMDTNAQITYSLHG-------PGAQEFKLDPHTGEL 3069
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 16 YELTLVASD-SLN-ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLA 73
Y L + ASD SL E T VV+HI D ND+ P+F+ Y + E+ P P + KV A
Sbjct: 115 YTLIVQASDKSLEFEALTQVVVHILDQNDLKPLFSPPSYRVTISEDRPLKSP--ICKVTA 172
Query: 74 TDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA 115
TD D QN Y+ A N + F I+ T+G + A
Sbjct: 173 TDADLG-QNAEFYY-------AFNARSEVFAIHPTSGVVTVA 206
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 32 TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLT 89
+V I + DVND PVF Y A + E +PG ++++V A D D + Y L+
Sbjct: 2784 SVSIQVEDVNDNRPVFEADPYKAFLTENMPGGT--TVIQVTANDQDTGSDGQVSYRLS 2839
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 28 ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY 86
+ + VV+ I DVND PP+F+ L+ + E L P + +++A+D D+ ++ Y
Sbjct: 1223 RSTSRVVVCILDVNDNPPMFSHKLFNVRLSERLSPLSPEPVYRLVASDPDEGLNGSVTY 1281
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 14/81 (17%)
Query: 33 VVIHINDVNDMPPVFNTSLYP-AIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQ 91
V+IH+ DVND PP F+ +Y A++E PG LL V A D D + + Y +
Sbjct: 1858 VIIHVRDVNDSPPRFSEQIYEVAVVEPIHPG---MGLLTVQAEDND----SRVTYSIKTS 1910
Query: 92 GIDADNPGNSKFDINRTTGEI 112
D I+ TTG+I
Sbjct: 1911 NAD------EAVTIHPTTGQI 1925
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 30 KTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLT 89
+T VV++++D+ND PP F Y A + E H +LKV A D D + + Y +
Sbjct: 2362 ETLVVVNVSDINDNPPKFREPQYEANVSE--LATCGHLVLKVQALDPDIGDTSRLEYLIL 2419
Query: 90 GQGIDADNPGNSKFDINRTTGEI 112
D F IN T+G I
Sbjct: 2420 SGNQD------RHFSINSTSGII 2436
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 15 IYELTLVASDSLNEN-KTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLA 73
+Y L A+D ++ + V +HI DVND P F S + + P ++ V A
Sbjct: 3082 VYNLVAKATDGGGQSCQAEVTLHIEDVNDNAPRFFPSHCDVAVFDNTTVKTPVAV--VFA 3139
Query: 74 TDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
D D+ +VY LT + + +F I+ T+G I
Sbjct: 3140 RDPDQGANAQVVYSLT-------DSADGQFSIDATSGVI 3171
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLT 89
TT+VI++ DVN+ P F LY ++E + G +L V A+D D + I Y L
Sbjct: 3307 TTIVINVTDVNEHHPRFTHDLYTVRVLENAVVGDV---ILTVSASDDDGPVNSAITYSLV 3363
Query: 90 GQ---GIDADNPGNSKFDINR 107
G G NP K + +
Sbjct: 3364 GGNQLGHFTINPKKGKLQVAK 3384
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTG 90
TV I + D ND P F S Y + + P +++VLA D D+ R ++ Y +
Sbjct: 2569 CTVKIILTDENDNAPQFKASGYTVSIPSNVSRDSP--IIQVLAYDADEGRNADVTYSVDS 2626
Query: 91 QGIDADNPGNSKFDINRTTGEI 112
++ ++N TTG +
Sbjct: 2627 ----TEDLAEEIIEVNPTTGVV 2644
>sp|Q8TDW7|FAT3_HUMAN Protocadherin Fat 3 OS=Homo sapiens GN=FAT3 PE=2 SV=2
Length = 4589
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 15 IYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74
IY L + A+D L + V + ++DVND PV + Y A++ E++P +LKV A
Sbjct: 2997 IYFLNITATDGLFVTQAMVEVSVSDVNDNSPVCDQVAYTALLPEDIPS--NKIILKVSAK 3054
Query: 75 DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
D D I Y L G GNS+F ++ +GE+
Sbjct: 3055 DADIGSNGYIRYSLYGS-------GNSEFFLDPESGEL 3085
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 13 TLIYELTLVASDSLNENKTTVVIH--INDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK 70
T Y+LT+ ASD+L + V + +NDVND PP+F+ Y + E P +L+
Sbjct: 2251 TSAYKLTIRASDALTGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTP--VLQ 2308
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118
V++ D D + N +V++ Q D N + F I+ ++G I A ++
Sbjct: 2309 VVSIDADSE-NNKMVHYQIVQ--DTYNSTD-YFHIDSSSGLILTARML 2352
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 30 KTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY 86
K V I I D ND P F LY A + E + P S+L V A+D DK I Y
Sbjct: 455 KAQVTISIEDANDHTPEFQQPLYDAYVNESV--PVGTSVLTVSASDKDKGENGYITY 509
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY 86
V I+I+DVND PPVFN +Y + + E P H + V A+D D + + Y
Sbjct: 2380 VHIYISDVNDNPPVFNQLIYESYVSE--LAPRGHFVTCVQASDADSSDFDRLEY 2431
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 16 YELTLVASDS---LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y L + A DS + TV I I+DVND PVF + Y A+++E P S+L+++
Sbjct: 3412 YSLLVQAVDSGIPAMSSTATVNIDISDVNDNSPVFTPANYTAVIQEN--KPVGTSILQLV 3469
Query: 73 ATDGD 77
TD D
Sbjct: 3470 VTDRD 3474
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 27 NENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY 86
N V++++ D ND P F LY A + E ++L+V A D DK ++Y
Sbjct: 1546 RRNLARVIVNVEDANDHSPYFTNPLYEASVFES--AALGSAVLQVTALDKDKGENAELIY 1603
Query: 87 FLTGQGIDADNPGN 100
I+A N GN
Sbjct: 1604 -----TIEAGNTGN 1612
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 14/91 (15%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPAIM-EEELPGPYPHSLLKVLATDGDKDRQNNIVYFLT 89
TTV I + D+ND PPVF Y + E+ PG +L V AT D I Y +
Sbjct: 3220 TTVTITVLDINDNPPVFERRDYLVTVPEDTSPGT---QVLAVFATSKDIGTNAEITYLI- 3275
Query: 90 GQGIDADNPGNS--KFDINRTTGEIFFAPLI 118
GN KF IN TG I + ++
Sbjct: 3276 -------RSGNEQGKFKINPKTGGISVSEVL 3299
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 28 ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYF 87
E+ V I + DVND PPVF +++ I+ LP +LKV ATD D + + Y
Sbjct: 1864 ESPVEVNIEVTDVNDNPPVFTQAVFETIL--LLPTYVGVEVLKVSATDPDSEVPPELTYS 1921
Query: 88 LTGQGID 94
L +D
Sbjct: 1922 LMEGSLD 1928
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 28 ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYF 87
E T V I + D+ND+ P+F+ + Y + E P S+ +V ATD D Y+
Sbjct: 139 EAWTKVNIQVLDMNDLRPLFSPTTYSVTIAEST--PLRTSVAQVTATDADIGSNGEFYYY 196
Query: 88 LTGQ 91
+
Sbjct: 197 FKNK 200
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 16 YELTLVASD---SLNENKTTVV-IHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKV 71
+ ++VASD + + + T +V + + D+ND PVF +Y ++E P P ++ V
Sbjct: 2889 FTFSVVASDLGEAFSLSSTALVSVRVTDINDNAPVFAQEVYRGNVKESDP---PGEVVAV 2945
Query: 72 LAT-DGD-KDRQNNIVYFLTG 90
L+T D D D + Y +TG
Sbjct: 2946 LSTWDRDTSDVNRQVSYHITG 2966
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 32 TVVIHINDVNDMPPVFNTSLYPAIMEEE-LPGPYPHSLLKVLATDGDKDRQNNIVYFLTG 90
TV I++ DVND PP F+ +Y A++ E+ L G S++ ++A D D + N ++F
Sbjct: 3326 TVNINLTDVNDNPPKFSQDVYSAVISEDALVG---DSVILLIAEDVDS-QPNGQIHFSIV 3381
Query: 91 QGIDADN 97
G D DN
Sbjct: 3382 NG-DRDN 3387
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
Query: 15 IYELTLVAS---DSLNENKTTVVIHINDVNDMPPVF-NTSLYPAIMEEELPGPYPHSLLK 70
+YEL + AS D L + V ++I D+ND PVF Y A+ + PG + +
Sbjct: 2049 LYELVVEASRELDHLRVARVVVRVNIEDINDNSPVFVGLPYYAAVQVDAEPGTL---IYQ 2105
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFF 114
V A D DK + Y L D+ G+ F+IN +G +
Sbjct: 2106 VTAIDKDKGPNGEVTYVL------QDDYGH--FEINPNSGNVIL 2141
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 15 IYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKVLA 73
IY +++ +D N T V I + D ND P F+ Y I E+ LP +L++ A
Sbjct: 1428 IYNMSVEVTDGTNVAVTQVFIKVLDNNDNGPEFSQPNYDVTISEDVLPDT---EILQIEA 1484
Query: 74 TDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA 115
T D+D ++ + Y + D+ KF I+ +TG ++ A
Sbjct: 1485 T--DRDEKHKLSYTVHSS---IDSISMRKFRIDPSTGVLYTA 1521
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFL 88
V I + D+ND PVF TS Y I+ E + P L +V A D D + Y L
Sbjct: 2800 VDIKVLDLNDNKPVFETSSYDTIIMEGM--PVGTKLTQVRAIDMDWGANGQVTYSL 2853
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 15 IYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74
+Y L + SD L + V I + N P F+ S Y A + E + ++ V AT
Sbjct: 2464 LYSLNVSVSDGLFTSTAQVHIRVLGANLYSPAFSQSTYVAEVRENVAA--GTKVIHVRAT 2521
Query: 75 DGDKDRQNNIVYFL 88
DGD I Y +
Sbjct: 2522 DGDPGTYGQISYAI 2535
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 16/103 (15%)
Query: 16 YELTLVASDSLNENK-----TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK 70
Y L + A D + T+ + ++DVND P F S Y + E+LP +++
Sbjct: 900 YSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYSVKVLEDLP---VGTVIA 956
Query: 71 VLAT-DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
L T D D + Y L N N +F+I++ +G I
Sbjct: 957 WLETHDPDLGLGGQVRYSLV-------NDYNGRFEIDKASGAI 992
>sp|Q8R508|FAT3_RAT Protocadherin Fat 3 OS=Rattus norvegicus GN=Fat3 PE=1 SV=1
Length = 4555
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 15 IYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74
IY L + ASD L + V + ++DVND PV + Y A + E++P +LKV A
Sbjct: 2996 IYFLNITASDGLFVTQAMVEVTVSDVNDNSPVCDQVAYSASLPEDIPS--NKIILKVSAK 3053
Query: 75 DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
D D +I Y L G GNS F ++ +GE+
Sbjct: 3054 DADIGSNGDIRYSLYGS-------GNSDFFLDPESGEL 3084
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 8/106 (7%)
Query: 15 IYELTLVASDSLNENKTTVVIH--INDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
+Y+LT+ ASD+L + V + ++DVND PPVF+ Y + E P +L+++
Sbjct: 2252 VYKLTVRASDALTGARAEVTVDLLVDDVNDNPPVFDQPTYNTTLSESSLIGTP--VLQLV 2309
Query: 73 ATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118
+TD D NN+V++ Q D N + F I+ ++G I A ++
Sbjct: 2310 STDADSG-NNNLVHYQIVQ--DTYNSTD-YFHIDSSSGLILTARML 2351
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 15 IYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74
+Y+L + SD + K V I I D ND P F +LY + E + P ++L V A+
Sbjct: 441 VYKLEV--SDKEGDAKAQVTIGIEDANDHTPEFQETLYETFVNESV--PVGTNVLTVSAS 496
Query: 75 DGDKDRQNNIVY 86
D DK I Y
Sbjct: 497 DKDKGENGYITY 508
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 16 YELTLVASDS---LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y L + A DS + TTV I I+DVND PVF + Y A+++E P S+L+++
Sbjct: 3411 YSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANYTAVIQEN--KPVGTSILQLV 3468
Query: 73 ATDGD 77
TD D
Sbjct: 3469 VTDRD 3473
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY 86
V I+I+DVND PPVFN +Y + + E P H + V A+D D + + Y
Sbjct: 2379 VQIYISDVNDNPPVFNQLIYESYVSE--LAPRGHFVTCVQASDADSSDFDRLEY 2430
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 27 NENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKVLATDGDKDRQNNIV 85
N V++++ D ND P F LY A + E G +L+V A D DK ++
Sbjct: 1545 RRNLARVIVNVEDANDHSPYFTNPLYEASVFESAALGSV---VLQVTALDKDKGENAELI 1601
Query: 86 YFLTGQGIDADNPGNS 101
Y I+A N GN+
Sbjct: 1602 Y-----SIEAGNTGNT 1612
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 15 IYELTLVASDSLNE-NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLA 73
+Y L A+D +TV++ + DVND PPVF+++ Y A + E L +V A
Sbjct: 3097 VYNLIARATDGGGRFCSSTVLLLLEDVNDNPPVFSSNHYTACVYENT--ATKALLTRVQA 3154
Query: 74 TDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
D D +VY L ++ + F I+ ++G I
Sbjct: 3155 VDPDVGINRKVVYSL-------EDSASGVFSIDSSSGVI 3186
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 28 ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYF 87
E+ V I + DVND PPVF +++ ++ LP +LKV ATD D + + Y
Sbjct: 1863 ESPVEVNIEVTDVNDNPPVFTQAVFETVL--LLPTYVGVEVLKVSATDPDSEVPPELTYS 1920
Query: 88 LTGQGID 94
L +D
Sbjct: 1921 LMEGSVD 1927
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 32 TVVIHINDVNDMPPVFNTSLYPAIMEEE-LPGPYPHSLLKVLATDGDKDRQNNIVYFLTG 90
TV I + DVND PP F+ +Y A++ E+ L G S++ ++A D D I + + G
Sbjct: 3325 TVSIDLTDVNDNPPRFSQDVYSAVISEDALEG---DSVILLIAEDVDSKPNGQIRFSIVG 3381
Query: 91 QGIDADN 97
D DN
Sbjct: 3382 G--DRDN 3386
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
Query: 15 IYELTLVAS---DSLNENKTTVVIHINDVNDMPPVF-NTSLYPAIMEEELPGPYPHSLLK 70
+YEL + AS D L + V ++I DVND PVF Y A+ + PG + +
Sbjct: 2048 LYELVVEASRELDHLRVARVVVRVNIEDVNDNSPVFVGLPYYAAVQVDAEPGTL---IYR 2104
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFF 114
V A D DK + Y L D+ G+ F+IN +G +
Sbjct: 2105 VTAIDKDKGANGEVTYVL------QDDYGH--FEINPNSGNVIL 2140
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 16 YELTLVASDSLN-ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP-----GPYPHSLL 69
Y+L + A++ + TV + + D ND PPVF S Y + E P +S L
Sbjct: 1736 YQLIIQATNMAGMASNATVSVQVVDENDNPPVFLFSQYSGSLSEAAPINSLVRSLDNSPL 1795
Query: 70 KVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
+ ATD D ++ +VY + ++ F ++ +TG I
Sbjct: 1796 VIRATDADSNQNALLVYQI------VESTAKKFFTVDSSTGAI 1832
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 28 ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYF 87
E T V I + D+ND+ P+F+ + Y + E P S+ +V ATD D Y+
Sbjct: 138 EAWTKVNIQVLDMNDLRPLFSPTTYSVTIAEST--PLRTSVAQVTATDADIGSNGEFYYY 195
Query: 88 LTGQ 91
+
Sbjct: 196 FKNK 199
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFL 88
V + + D+ND PVF TS Y I+ E + P L +V A D D + Y L
Sbjct: 2799 VDVKVLDLNDNKPVFETSSYETIIMEGM--PVGTKLAQVRAIDTDWGANGQVTYSL 2852
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTG 90
T+V I + D+ND PPVF Y + E+ +L V AT D I Y +
Sbjct: 3219 TSVTITVLDINDNPPVFERRDYLVTVPEDT--SLGTQVLSVFATSKDIGTNAEITYLI-- 3274
Query: 91 QGIDADNPGNS--KFDINRTTGEI 112
GN KF IN TG I
Sbjct: 3275 ------RSGNEQGKFRINPKTGGI 3292
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQN---NIVYFLT 89
V + + D+ND PVF +Y ++E P P ++ VL+T DKD N + Y +T
Sbjct: 2909 VSVKVTDINDNAPVFAHEVYRGNVKESDP---PGEVVAVLST-LDKDTSNINRQVSYHIT 2964
Query: 90 G 90
G
Sbjct: 2965 G 2965
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 14/102 (13%)
Query: 16 YELTLVASDSLNENK-----TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK 70
Y L + A D + T+ I ++DVND P F S Y + E+LP + L+
Sbjct: 899 YSLKIEARDKAESGQQLFSVVTLKIFLDDVNDCSPAFIPSSYSVKVLEDLPVGTVIAWLE 958
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
D D + Y L N N +F+I++ +G I
Sbjct: 959 --TQDPDLGLGGQVRYSLV-------NDYNGRFEIDKASGAI 991
>sp|Q5F226|FAT2_MOUSE Protocadherin Fat 2 OS=Mus musculus GN=Fat2 PE=2 SV=1
Length = 4351
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 29 NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFL 88
++ TV + + D+ND PP F+ +Y + E P P ++++LA+D D + ++ Y +
Sbjct: 2254 SEATVEVLVEDINDNPPTFSQLVYSTSVSEGSPAQTP--VIQLLASDQDSGQNQDVSYQI 2311
Query: 89 TGQGIDADNPGNSKFDINRTTGEIF 113
G D + F IN +TGE+F
Sbjct: 2312 VEDGSDV----SKFFRINGSTGEMF 2332
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 25 SLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNI 84
SL + TTV+I I D N+ PVFN S Y ++E +P S+L V ATD D +I
Sbjct: 436 SLGQATTTVIIDIVDCNNHAPVFNRSSYEGTLDENIPPGT--SVLTVTATDQDHGDNGHI 493
Query: 85 VYFLTG 90
Y + G
Sbjct: 494 TYSIAG 499
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEEL-PGPYPHSLLKVLAT 74
Y L + ASD + V + + D+ND P + LY + E++ PG H +LKV A
Sbjct: 2982 YLLRITASDGKFQASVPVEVFVLDINDNSPQCSQLLYTGKVREDVTPG---HFILKVSAI 3038
Query: 75 DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
D D D I Y L G PG +F ++ TGE+
Sbjct: 3039 DVDMDTNAQITYSLHG-------PGAQEFKLDPHTGEL 3069
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 16 YELTLVASD-SLN-ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLA 73
Y L + ASD SL E T VV+HI D ND+ P+F+ Y + E+ P P + KV A
Sbjct: 115 YTLVVQASDKSLEFEALTQVVVHILDQNDLKPLFSPPSYRFTISEDRPLKSP--ICKVTA 172
Query: 74 TDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA 115
TD D QN Y+ A N + F I+ T+G + A
Sbjct: 173 TDADLG-QNAEFYY-------AFNARSEVFAIHPTSGVVTVA 206
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 32 TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLT 89
+V I + DVND PVF Y A + E +PG ++++V A D D + Y L+
Sbjct: 2784 SVNIQVEDVNDNRPVFEADPYKAFLTENMPGGT--TVIQVTANDQDTGSDGQVSYRLS 2839
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 33 VVIHINDVNDMPPVFNTSLYP-AIMEEELPGPYPHSLLKVLATDGD 77
V+IH+ DVND PP F+ +Y A++E PG LL V A D D
Sbjct: 1858 VIIHVRDVNDSPPRFSEQIYEVAVVEPIHPG---MELLTVQAEDND 1900
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 30 KTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLT 89
+T VV++++D+ND PP F Y A + E H +LKV A D D + + Y +
Sbjct: 2362 ETLVVVNVSDINDNPPEFREPQYEANVSE--LATCGHLVLKVQALDPDIGDTSRLEYLIL 2419
Query: 90 GQGIDADNPGNSKFDINRTTGEI 112
D F IN T+G I
Sbjct: 2420 SGNQD------RHFSINSTSGII 2436
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 28 ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY 86
+ + VV+ + DVND P+F+ L+ + E L P + +++A+D D+ +I Y
Sbjct: 1223 RSTSRVVVCVLDVNDNSPMFSHKLFNVRLSERLSPLSPEPVYRLVASDPDEGLNGSITY 1281
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 15 IYELTLVASDSLNEN-KTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLA 73
+Y L A+D ++ + V +HI DVND P F S + + P ++ V A
Sbjct: 3082 VYNLVAKATDGGGQSCQAEVTLHIEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAV--VFA 3139
Query: 74 TDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
D D+ +VY LT + + +F I+ T+G I
Sbjct: 3140 RDPDQGVNAQVVYSLT-------DSADGQFSIDATSGVI 3171
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLT 89
TT+VI++ DVN+ P F LY ++E + G +L V A+D D + I Y L
Sbjct: 3307 TTIVINVTDVNEHHPRFTHDLYTVRVLENAIVGDV---ILTVSASDDDGPVNSVITYSLV 3363
Query: 90 G 90
G
Sbjct: 3364 G 3364
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTG 90
TV I + D ND P F S Y + + P +++VLA D D+ R ++ Y +
Sbjct: 2569 CTVKIILTDENDNAPQFKASGYTVSIPSNVSRDSP--IIQVLAYDADEGRNADVTYSVDS 2626
Query: 91 QGIDADNPGNSKFDINRTTGEI 112
++ ++N TTG +
Sbjct: 2627 ----TEDLAEEIIEVNPTTGVV 2644
>sp|Q8BNA6|FAT3_MOUSE Protocadherin Fat 3 OS=Mus musculus GN=Fat3 PE=1 SV=2
Length = 4555
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 15 IYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74
IY L + ASD L + V + ++DVND PV + Y A + E++P +LKV A
Sbjct: 2996 IYFLNITASDGLFVTQAMVEVTVSDVNDNSPVCDQVAYSASLPEDIPS--NKIILKVSAK 3053
Query: 75 DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
D D +I Y L G GN++F ++ +GE+
Sbjct: 3054 DADIGSNGDIRYSLYGS-------GNNEFFLDPESGEL 3084
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 13 TLIYELTLVASDSLNENKTTVVIH--INDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK 70
T +Y+LT+ ASD+L + V + ++D+ND PPVF+ Y + E P +L+
Sbjct: 2250 TSVYKLTVRASDALTGARAEVTVDLLVDDINDNPPVFDQPTYNTTLSESSLIGTP--VLQ 2307
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118
+++TD D + Y + ++ + F I+ ++G I A ++
Sbjct: 2308 LVSTDADSGNNKLVRYQIVQDTYNSTD----YFHIDSSSGLILTARML 2351
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 16 YELTLVASDS---LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y L + A DS + TTV I I+DVND PVF + Y A+++E P S+L+++
Sbjct: 3411 YSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANYTAVIQEN--KPVGTSILQLV 3468
Query: 73 ATDGD 77
TD D
Sbjct: 3469 VTDRD 3473
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY 86
V I+I+DVND PPVFN +Y + + E P H + V A+D D + + Y
Sbjct: 2379 VQIYISDVNDNPPVFNQLIYESYVSE--LAPRGHFVTCVQASDADSSDLDRLEY 2430
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 15 IYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74
+Y+L + SD + K V I I D ND P F +LY + E + ++L V A+
Sbjct: 441 VYKLEV--SDKEGDAKAQVTIGIEDANDHTPEFQEALYETFVNESV--RVGTNVLTVSAS 496
Query: 75 DGDKDRQNNIVY 86
D DK I Y
Sbjct: 497 DKDKGENGYITY 508
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 27 NENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKVLATDGDKDRQNNIV 85
N V++++ D ND P F LY A + E G +L+V A D DK ++
Sbjct: 1545 RRNLARVIVNVEDANDHSPYFTNPLYEASVFESAALGSV---VLQVTALDKDKGENAELI 1601
Query: 86 YFLTGQGIDADNPGNS 101
Y I+A N GN+
Sbjct: 1602 Y-----SIEAGNTGNT 1612
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 28 ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYF 87
E+ V I + DVND PPVF +++ ++ LP +LKV ATD D + + Y
Sbjct: 1863 ESPVEVNIEVTDVNDNPPVFTQAVFETVL--LLPTYIGVEVLKVSATDPDSEVPPELTYS 1920
Query: 88 LTGQGID 94
L +D
Sbjct: 1921 LMEGSVD 1927
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 32 TVVIHINDVNDMPPVFNTSLYPAIMEEE-LPGPYPHSLLKVLATDGDKDRQNNIVYFLTG 90
TV I + DVND PP F+ +Y A++ E+ L G S++ ++A D D I + + G
Sbjct: 3325 TVSIDLTDVNDNPPRFSQDVYSAVISEDALEG---DSVILLIAEDVDSKPNGQIRFSIVG 3381
Query: 91 QGIDADN 97
D DN
Sbjct: 3382 G--DRDN 3386
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
Query: 15 IYELTLVAS---DSLNENKTTVVIHINDVNDMPPVF-NTSLYPAIMEEELPGPYPHSLLK 70
+YEL + AS D L + V ++I DVND PVF Y A+ + PG + +
Sbjct: 2048 LYELVVEASRELDHLRVARVVVRVNIEDVNDNSPVFVGLPYYAAVQVDAEPGTL---IYR 2104
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFF 114
V A D DK + Y L D+ G+ F+IN +G +
Sbjct: 2105 VTAIDKDKGANGEVTYVL------QDDYGH--FEINPNSGNVIL 2140
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 15 IYELTLVASDSLNE-NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLA 73
+Y L A+D ++V++ + DVND PPVF+++ Y A + E L +V A
Sbjct: 3097 VYNLIARATDGGGRFCSSSVLLLLEDVNDNPPVFSSNHYTACVYENT--ATKALLTRVQA 3154
Query: 74 TDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
D D +VY L ++ + F I+ ++G I
Sbjct: 3155 MDPDVGINRKVVYSL-------EDSASGVFSIDSSSGVI 3186
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 16 YELTLVASDSLN-ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP-----GPYPHSLL 69
Y+L + A++ + T+ + I D ND PPVF S Y + E P +S L
Sbjct: 1736 YQLIIQATNMAGMASNATISVQIVDENDNPPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 1795
Query: 70 KVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
+ ATD D ++ +VY + ++ F ++ +TG I
Sbjct: 1796 VIRATDADSNQNALLVYQI------VESTAKKFFTVDSSTGAI 1832
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 28 ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYF 87
E T V I + D+ND+ P+F+ + Y + E P S+ +V ATD D Y+
Sbjct: 138 EAWTKVNIQVLDMNDLRPLFSPTTYSVTIAEST--PLRTSVAQVTATDADIGSNGEFYYY 195
Query: 88 LTGQ 91
+
Sbjct: 196 FKNK 199
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFL 88
V + + D+ND PVF TS Y I+ E + P L +V A D D + Y L
Sbjct: 2799 VDVKVLDLNDNKPVFETSTYETIIMEGM--PVGTKLAQVRAIDMDWGANGQVTYSL 2852
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQN---NIVYFLT 89
V + + D+ND PVF +Y ++E P P ++ VL+T DKD N + Y +T
Sbjct: 2909 VSVKVTDINDNAPVFAHEVYRGNVKESDP---PGEVVAVLST-LDKDTSNINRQVSYHIT 2964
Query: 90 G 90
G
Sbjct: 2965 G 2965
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 12/83 (14%)
Query: 32 TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQ 91
+V I + D+ND PPVF Y + E+ +L V AT D I Y +
Sbjct: 3220 SVTITVLDINDNPPVFERRDYLVTVPEDT--SLGTQVLSVFATSKDIGTNAEITYLI--- 3274
Query: 92 GIDADNPGNS--KFDINRTTGEI 112
GN KF IN TG I
Sbjct: 3275 -----RSGNEQGKFSINPKTGGI 3292
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 14/102 (13%)
Query: 16 YELTLVASDSLNENK-----TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK 70
Y L + A D + T+ I ++DVND P F S Y + E+LP + L+
Sbjct: 899 YSLKIEARDKAESGQQLFSVVTLKIFLDDVNDCSPAFIPSSYSVKVLEDLPVGTVIAWLE 958
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
D D + Y L N N +F++++ +G I
Sbjct: 959 --TQDPDLGLGGQVRYSLV-------NDYNGRFEVDKASGAI 991
>sp|Q96JQ0|PCD16_HUMAN Protocadherin-16 OS=Homo sapiens GN=DCHS1 PE=2 SV=1
Length = 3298
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHS-LLKVLAT 74
Y+L L+A D +E + + + + DVND P F+ SLY ++ E P P S +L V AT
Sbjct: 2345 YQLQLLAHDGPHEGRANLTVLVEDVNDNAPAFSQSLYQVMLLEHTP---PGSAILSVSAT 2401
Query: 75 DGDKDRQNNIVYFLT----GQGIDADN 97
D D +I Y L G +D +N
Sbjct: 2402 DRDSGANGHISYHLASPADGFSVDPNN 2428
Score = 37.4 bits (85), Expect = 0.026, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 39 DVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNP 98
D+ND P FN S Y A++ E L P +L+V A+D D + Y + + + D P
Sbjct: 247 DINDHAPAFNQSRYHAVVSESLAPGSP--VLQVFASDADAGVNGAVTYEINRRQSEGDGP 304
Query: 99 GNSKFDINRTTG 110
F I+ TG
Sbjct: 305 ----FSIDAHTG 312
Score = 35.8 bits (81), Expect = 0.075, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 16 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLY--PAIMEEELPGPYPHSLLK 70
Y L + A+DS + + V+H+ DVND P F+ LY + E LPG + +++
Sbjct: 438 YNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLPEVALPGSF---VVR 494
Query: 71 VLATDGDKDRQNNIVYFL 88
V A D D+ + Y L
Sbjct: 495 VTARDPDQGTNGQVTYSL 512
Score = 33.1 bits (74), Expect = 0.55, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL-ATDGDKDRQNNIVYFLTGQ 91
V I + DVND P F +L + E P P +L+ L A DGD + Y L
Sbjct: 2692 VTIEVQDVNDHGPAFPLNLLSTSVAENQP---PGTLVTTLHAIDGDAGAFGRLRYSLLEA 2748
Query: 92 GIDADNPGNSKFDINRTTGEI 112
G + G F +N +TGE+
Sbjct: 2749 GPGPE--GREAFALNSSTGEL 2767
Score = 32.3 bits (72), Expect = 0.80, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 18 LTLVASDSLNENKTT---VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74
LT+VASD + ++ + + + DVND P F Y ++ E P SLL + AT
Sbjct: 1617 LTVVASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEYSVLLREN--NPPGTSLLTLRAT 1674
Query: 75 DGDKDRQNNIVY 86
D D + Y
Sbjct: 1675 DPDVGANGQVTY 1686
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 30 KTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIV 85
+ TV + + D ND P F S Y + E+LP +LL + ATD D R + V
Sbjct: 2465 RATVHVQLQDQNDHAPSFTLSHYRVAVTEDLPP--GSTLLTLEATDADGSRSHAAV 2518
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 29 NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHS-LLKVLATDGDKDRQNNIVYF 87
+ TV + + DVND P F + Y A + E G P + L+V ATD D + Y
Sbjct: 560 SSATVSVALQDVNDNEPQFQRTFYNASLPE---GTQPGTCFLQVTATDADSGPFGLLSYS 616
Query: 88 LTGQGIDADNPGNSKFDINRTTGEI 112
L G G+ + G+ F I+ +G++
Sbjct: 617 L-GAGLGSS--GSPPFRIDAHSGDV 638
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Query: 32 TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT----DGDKDRQNNIVYF 87
+V I + DVND P F TS P + PGP + LAT D D +I+Y
Sbjct: 1945 SVTITVRDVNDHAPTFPTS--PLRLRLPRPGPSFSTPTLALATLRAEDRDAGANASILYR 2002
Query: 88 LTGQGIDADNPGNSKFDINRTTGEIFFA 115
L G PG + ++ TGEI A
Sbjct: 2003 LAG----TPPPGTT---VDSYTGEIRVA 2023
>sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster GN=ds PE=1 SV=3
Length = 3503
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNT-------SLYPAIMEEELPGPYPHSL 68
YEL ++ASD+ +E +T + + +ND ND PVF ++ PAI E L
Sbjct: 2448 YELDVIASDAAHEARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDL 2507
Query: 69 LKVLATDGDKDRQNNIVYFL 88
L V ATD D + N+ V ++
Sbjct: 2508 LTVNATDADSEGNNSKVIYI 2527
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Query: 16 YELTLVASDS----LNENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLK 70
Y L++VA+D L+ +K+ + + I DVND PP F LY A +ME PG S+L+
Sbjct: 417 YTLSVVATDKGTPPLHASKS-IFLRITDVNDNPPEFEQDLYHANVMEVADPGT---SVLQ 472
Query: 71 VLATDGDKDRQNNIVYFLT 89
VLA D D+ + + Y L
Sbjct: 473 VLAHDRDEGLNSALTYSLA 491
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 17 ELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLY-PAIMEEELPGPYPHSLLKVL 72
+LT+VA D + TV++ I+DVND P+F+ S Y ++ E E P +LKV
Sbjct: 525 QLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENE---PVGRCILKVS 581
Query: 73 ATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA 115
A+D D N +V + G+G ++F++ +GEI A
Sbjct: 582 ASDPDCG-VNAMVNYTIGEGFKH----LTEFEVRSASGEICIA 619
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 32 TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQ 91
TV I I DVND P+FN S Y A + E S+L+V A+D D D + Y + +
Sbjct: 218 TVNITIQDVNDNQPIFNQSRYFATVPEN--ATVGTSVLQVYASDTDADENGLVEYAINRR 275
Query: 92 GIDADNPGNSKFDINRTTGEIFF 114
D + F I+ TG I+
Sbjct: 276 QSDKEQ----MFRIDPRTGAIYI 294
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 15/101 (14%)
Query: 16 YELTLVASDS---LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y+LT++A+D+ KT V++ + D ND P F S Y +EE L S++ V+
Sbjct: 1066 YQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENL---RRGSVVGVV 1122
Query: 73 -ATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
A+D D I Y L P NS F ++ TGEI
Sbjct: 1123 TASDLDLGENAAIRYSLL--------PINSSFQVHPVTGEI 1155
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 15 IYELTLVASDS---LNENKTTVVIHINDVNDMPPVFN--TSLYPAIMEEELPGPYPHSLL 69
+Y+L + A D + + V IH++DVND P ++ EE+ PG ++
Sbjct: 1168 LYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGT---EVV 1224
Query: 70 KVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
+V A D D + +I Y + +G D+D G+ F I+ T+G I
Sbjct: 1225 RVRAVDRDHGQNASITYSIV-KGRDSD--GHGLFSIDPTSGVI 1264
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 16 YELTLVASDSLNENKTTVV-IHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74
Y++ L+ASD + + V + I ++ P F Y ++ + P + + +V AT
Sbjct: 2884 YDMELLASDMGGKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTAT 2943
Query: 75 DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFF 114
D D +VY L+ +S F +NR++G +
Sbjct: 2944 DSDSGPDGRVVYQLSAP--------HSHFKVNRSSGAVLI 2975
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 14/104 (13%)
Query: 16 YELTLVASDSLNENKTTVV-IHINDVNDMPPVFNTSLYPAIMEEELPGPYPHS---LLKV 71
YE ++A+D + T ++ + + DVND PVF Y + E S ++ V
Sbjct: 630 YEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAV 689
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSK--FDINRTTGEIF 113
+ATD D + Y + GN F I+R+TGEIF
Sbjct: 690 VATDPDYGNFGQVSYRIVA--------GNEAGIFRIDRSTGEIF 725
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
Query: 16 YELTLVASDS--LNENKTTVVIHIN--DVNDMPPVFNTSLY----PAIMEEELPGPYPHS 67
Y ++A+D TV + IN D+ND P+F Y PA+++ PG +
Sbjct: 1969 YNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQ---PG---QT 2022
Query: 68 LLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
LLKV A D D IVY L + ++ ++KF IN +TG +
Sbjct: 2023 LLKVQALDADLGANAEIVYSLNAE----NSAVSAKFRINPSTGAL 2063
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 8 TSNLPTLIYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHS 67
+S TLI T SL+ N T+++ + DVND PPVF Y + E
Sbjct: 945 SSQRHTLIVTATDGGVPSLSTN-LTILVDVQDVNDNPPVFEKDEYSVNVSESR--SINAQ 1001
Query: 68 LLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTG 110
+++V A+D D I Y + G+D S D+++ G
Sbjct: 1002 IIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFG 1044
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 31 TTVVIHINDVNDMPPVFN-TSLYP-AIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFL 88
T+ I + DVND P F S Y ++ E PG + V+A+D D+ +++Y +
Sbjct: 1778 ATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPG----VIHTVVASDLDEGPNADLIYSI 1833
Query: 89 TGQGIDADNPGNSKFDINRTTGEIFFAPL 117
TG N GN KF I+ ++GE+ PL
Sbjct: 1834 TG-----GNLGN-KFSIDSSSGELSARPL 1856
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 33 VVIHINDVNDMPPVFNTSL-YPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQ 91
V+I I D ND P+F+ S Y A + E P Y + L+ + D + + +VY +T
Sbjct: 2685 VIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITS- 2743
Query: 92 GIDADNPGNSK--FDINRTTGEIF 113
GN + F I+ TG +F
Sbjct: 2744 -------GNDEHMFTIDLVTGVLF 2760
>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2
Length = 4981
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 32 TVVIHINDVNDMPPVFNTSLYPAIMEEEL-PGPYPHSLLKVLATDGDKDRQNNIVY-FLT 89
++VI +ND+ND PPVF +Y + EE+ PG Y + V ATDGD N+ Y ++
Sbjct: 460 SLVIFVNDINDHPPVFEQQVYRVNLSEEVPPGSY---VSGVSATDGDSGLNANLRYSIVS 516
Query: 90 GQGI 93
G G+
Sbjct: 517 GNGL 520
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 16 YELTLVASDSLNENKT---TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y LT+ A+D + +T TV I + D+ND PVF S Y + E L G P ++L+V+
Sbjct: 2225 YTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPENL-GTLPRAILQVV 2283
Query: 73 ATDGDKDRQNNIVYFLTG 90
A D D+ + + Y L G
Sbjct: 2284 ARDDDQGPNSQLSYVLLG 2301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATD 75
Y + + A DS T V I + D+ND P F+ Y + ELP + +V ATD
Sbjct: 2843 YRIRVSAHDSGWTVSTDVTIFVTDINDNTPRFSRPSY-YLDCPELP-ELGSRVTQVSATD 2900
Query: 76 GDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
D+ + YF+ Q + F IN TTGEIF
Sbjct: 2901 PDEGSNGQVFYFIKSQ--------SEYFRINATTGEIF 2930
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 17/106 (16%)
Query: 16 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEE-LPGPYPHSLLKV 71
Y LT+VA+D + T VV+ + D+ND PVF ++Y ++E L G +++V
Sbjct: 2120 YSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENILTGT---DIIQV 2176
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNS--KFDINRTTGEIFFA 115
A D D+ + Y + G GN+ +F I+ TG I A
Sbjct: 2177 SAADNDEGTNGQVRYGIVG--------GNTHQEFRIDSVTGAITVA 2214
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 33 VVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQ 91
V + + D+ND PPVF +S Y A + E+ + G S+L+V A D D+ +I Y L +
Sbjct: 236 VNVTVQDINDNPPVFGSSHYQAGVPEDAVVG---SSVLQVAAADADEGTNADIRYRLQDE 292
Query: 92 G 92
G
Sbjct: 293 G 293
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 16 YELTLVASD-SLNENKTTVV--IHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y++ +VASD + + ++++ ++++DVND PPVF+ Y + E P KV
Sbjct: 962 YQVEIVASDMGVPQLSSSILLTVYVHDVNDNPPVFDQISYEVTLSES--EPVNSRFFKVQ 1019
Query: 73 ATDGDKDRQNNIVYFLT 89
A+D D I Y +T
Sbjct: 1020 ASDKDSGANGEIAYTIT 1036
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYP-AIMEEELPGPYPHSLLKVLAT 74
Y L + A D L + + I I+DVND P F+ +Y I E+ PG + +LAT
Sbjct: 1810 YSLLVRADDGLQSSDMRINITISDVNDHTPRFSRPVYSFDIPEDTTPGSL---VAAILAT 1866
Query: 75 DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTG 110
D D I Y + ++ G+ F +N TG
Sbjct: 1867 DDDSGVNGEISYVV------EEDDGDGVFFLNLVTG 1896
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 11/106 (10%)
Query: 16 YELTLVASDSLNENKT---TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y LT+ A + +E K TV I + N+ P F + LY E ++ +V
Sbjct: 3266 YHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLY--YFEVSEAASRGTAVGEVF 3323
Query: 73 ATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118
A+D D + Y + G N F IN+ TG+I+ + L+
Sbjct: 3324 ASDRDMGADGEVHYLIFG------NSRKKGFQINKMTGQIYVSGLL 3363
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Query: 15 IYELTLVASDSLN---ENKTTVVIHINDVNDMPPVF-NTSLYPAIMEEELPGPYPHSLLK 70
+Y+L + A D + +VVI + D ND PP F ++ +I+E P S++
Sbjct: 1385 LYKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSFPPGDIFKSIVENI---PLGTSVIS 1441
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118
V A D D D + Y + Q P + F I+ G I+ + I
Sbjct: 1442 VTAHDPDADINGQLSYAIIQQ-----MPRGNHFSIDEVKGTIYTSAEI 1484
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 16 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y+L +VA+D N N+ V + + D D PPVF+ + Y ++ E + Y + V
Sbjct: 759 YQLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFENVALGY--HVGSVS 816
Query: 73 ATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118
AT D NI Y +T D G F +N TG++ A +I
Sbjct: 817 AT--TMDLNANISYLIT----TGDQRG--MFAMNPVTGQLTTASVI 854
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 16 YELTLVASDSLNENKTTVVIHIN--DVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLA 73
Y LT+ A D ++ TT+ + N DVND PPVF+ S Y + E L P ++L
Sbjct: 1912 YILTVRAEDGGGQS-TTIRAYFNILDVNDNPPVFSMSSYSTSLMENL--PLGSTVLVFNV 1968
Query: 74 TDGDKDRQNNIVY 86
TD D + + Y
Sbjct: 1969 TDADDGVNSQLSY 1981
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATD 75
Y+L +VAS T V I + D+ND P F ++ E HS+ + A D
Sbjct: 862 YQLKIVASGGAVTGDTVVNITVKDLNDNAPHFLQAVESINAVENWQA--GHSIFQAKAVD 919
Query: 76 GDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
D+ ++Y L NP N F IN G I
Sbjct: 920 PDEGVNGRVLYSL------KQNPKN-LFTINEQNGNI 949
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 16 YELTLVASDSLNE---NKTTVVIHINDVNDMPPVFNTSLYPAIMEEE-LPGPYPHSLLKV 71
Y L +VASD E V + + DVND P+FN++ Y EEE G + + KV
Sbjct: 1066 YVLLVVASDRAVEPLSATVNVTVLLEDVNDNRPLFNSTNYTFYFEEEQRAGSF---VGKV 1122
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
A D D + Y + P F+++ TGEI
Sbjct: 1123 SAVDKDFGPNGEVRY-----AFEVTQP---NFELHAVTGEI 1155
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 16 YELTLVASDS----LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKV 71
Y L +VASD+ + T+V++ I DVND PP F +P + P P + V
Sbjct: 2433 YTLVVVASDAGSPESLSSSTSVLVTITDVNDNPPRFQH--HPYVTHIPSPTPPGSFVFAV 2490
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA 115
TD D + + Y L+G+ + KF I+ G I A
Sbjct: 2491 TVTDADIGSNSELHYSLSGR-------NSEKFHIDPLRGAIMAA 2527
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 32 TVVIHINDVNDMPPVFNTSLY-PAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTG 90
T+ I ++D+ND P F ++Y +I E+ G +L V A+D D I Y + G
Sbjct: 2349 TINIIVDDINDNVPTFANNMYLTSIAEDARTGT---DVLLVNASDADAAANAVISYSIIG 2405
Query: 91 QGIDADNPGNSKFDINRTTGEIFFAPLI 118
GNS+F IN +TG+I + L+
Sbjct: 2406 --------GNSQFTINPSTGQIITSALL 2425
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 7 GTSNLPTLIYELTLVASDSLNEN---KTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGP 63
G SN+ + + ASD N + +TTV I+ D ND PP F + Y + + +
Sbjct: 2942 GFSNVNINRHSFIVTASDRGNPSLLSETTVTINTVDSNDNPPQFLQNKYFTPVTKNV--K 2999
Query: 64 YPHSLLKVLATDGDKD--RQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA 115
L+KV A D DKD + + YF++ D ++ G KF ++ TG I A
Sbjct: 3000 VGTKLIKVTAVD-DKDFGLNSEVEYFVS----DGNHLG--KFKLDNDTGWISIA 3046
>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan OS=Drosophila
melanogaster GN=stan PE=1 SV=4
Length = 3579
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 16 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKV 71
Y LT+ A D N + T V I + DVND P F + LY A I+E+ L G S+++V
Sbjct: 973 YLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGT---SVIQV 1029
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
A+D D I Y L+ + I+ + F I+ T+G I
Sbjct: 1030 AASDPDVGLNGRIKYLLSDRDIE-----DGSFVIDPTSGTI 1065
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 16 YELTLVASDSLNENKT-TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74
+ LT+ A+DS + T TV I+I D N+ P+F + Y A + E+ P ++L V AT
Sbjct: 865 FLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFED--APVGTTVLVVSAT 922
Query: 75 DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFF-APL 117
D D I Y L + I+ + F IN TG I APL
Sbjct: 923 DSDVGVNAQITYSLNEESINGLGSPDP-FSINPQTGAIVTNAPL 965
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQ 81
++VVI + DVND P FN Y A + E+ P P + V ATD D+D +
Sbjct: 778 SSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTP--VTTVTATDPDEDSR 826
>sp|Q9VGG5|CAD87_DROME Cadherin-87A OS=Drosophila melanogaster GN=Cad87A PE=1 SV=4
Length = 1975
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 14 LIYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLA 73
++Y + A+D ++ +TT + DV D PPVF SL I E+ P +L V A
Sbjct: 212 MVYHFQIEATDGPHKTQTTFEARVKDVQDKPPVFQGSLSTVIDED---SPINTLVLTVHA 268
Query: 74 TDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA 115
DGD IVY L NP N F ++ TGE+ A
Sbjct: 269 RDGDTGEPRKIVYDLRT------NP-NDYFLLDAQTGELRTA 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 15 IYELTL--VASD---SLNENKTTVVIHIN--DVNDMPPVFNTSLYPAIMEEELPGPYPHS 67
I ELTL VA D + + T IHIN DVND PVF +Y + + E P +
Sbjct: 1172 IKELTLSVVAQDKAPAAVQKSATATIHINILDVNDNAPVFTRDVYNSTVAENAAYQPPAA 1231
Query: 68 LLKVLATDGDKDRQNNIVYFLTG 90
LL+V A D D+ ++ Y +T
Sbjct: 1232 LLQVQAIDQDEGLYGDVRYIITA 1254
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Query: 16 YELTLVASDSLNENKTTVV---IHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y L+ A+D +VV I + D ND PPV + LY A ++E S L V
Sbjct: 635 YFLSYKATDDNGRGSASVVSLRISVTDANDSPPVCESPLYRASVDE--GAVVFDSPLIVK 692
Query: 73 ATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAP 116
A D D + I Y + G S FDI+R TG+I P
Sbjct: 693 ARDADT--MSRISYRIRGS-----EQVESIFDIDRETGQIIIRP 729
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Query: 22 ASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQ 81
A+D L V I + DVN+ P F Y A++EE S+ +V ATD D +
Sbjct: 749 ANDGLFTAHCGVNITVRDVNNHVPNFEQQSYSAVVEEN--SEIGTSVERVHATDLDTGKN 806
Query: 82 NNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA 115
+ Y + D F I TTGE+F +
Sbjct: 807 AELRYRIQQGSFD-------DFGIVETTGEVFVS 833
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
Query: 32 TVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKVLATDGDKDR--QNNIVYFL 88
T+ + + D ND PVF Y A + E LPG Y + + A D D + I Y L
Sbjct: 457 TITVSVLDANDNKPVFEQESYSASVSEAALPGQY---IATITARDVDSGSYGDSGIRYSL 513
Query: 89 TGQGIDADNPGNSKFDINRTTGEIFFA 115
+G G + F +N TG I A
Sbjct: 514 SGTGAEL-------FHVNEQTGVISLA 533
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 14/119 (11%)
Query: 3 LYPPGTSNLPTLIYELTLVASDSLN----ENKTTVVIHINDVNDMPPVFNTSLYPAIMEE 58
+YP + + YELT+ A D+ E+ T +I + VN P F + PA+
Sbjct: 1270 VYPAQSLSGKHGAYELTISARDTQGSGTMESTTKAIITVLRVNRHKPEF---VIPALSNA 1326
Query: 59 --ELPGPY---PHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
E+PG + LL V A D D + + Y L + G +F I+ TGE+
Sbjct: 1327 TIEIPGDIVQPDYLLLTVRAMDNDTEENGKVSYHLQVNNRNEQQTG--EFKIDEVTGEL 1383
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 22 ASDSLNENKTTVVIHINDVNDMPPVFNTSLYP-AIMEEELPG 62
+ D L + I DVND PPVFN Y +++E LPG
Sbjct: 333 SDDPLTSATAKATVTIRDVNDSPPVFNHKEYSVSLLENTLPG 374
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 25 SLNENKTT--VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQN 82
+LN + T V I + DVND PPVF +Y A + ++ V ATD D+ +
Sbjct: 1529 TLNRDNTVAKVAITVLDVNDNPPVFEKPIYYAGVNAN--AKMGAAITLVNATDADQGKNA 1586
Query: 83 NIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPL 117
I + + + KF ++TG I +P
Sbjct: 1587 KIEFMIVASNL-------YKFGATKSTGSIVPSPF 1614
>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus
GN=Celsr3 PE=2 SV=1
Length = 3313
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 20/111 (18%)
Query: 16 YELTLVASDSLNE---NKTTVVIHIN--DVNDMPPVFNTSLYPAIMEEELPGPYPHSL-L 69
YEL + ASD E TV +HI D ND P F+ Y A + E++ PH++ L
Sbjct: 500 YELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVREDV---RPHTVVL 556
Query: 70 KVLATDGDKDRQNNIVYFLTGQGIDADNPGNSK--FDINRTTGEI-FFAPL 117
+V ATD DKD + Y + GNS+ F I+ TGEI APL
Sbjct: 557 RVTATDKDKDANGLVHYNIIS--------GNSRGHFAIDSLTGEIQVMAPL 599
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 16 YELTLVASDS----LNENKTTVVIHINDVNDMPPVF-NTSLYPAIMEEELPGPYPHSLLK 70
Y L + A D+ L+ N I + D+ND P+F +T +++E P HS++
Sbjct: 607 YALRIRAQDAGRPPLSNNTGLASIQVVDINDHSPIFVSTPFQVSVLEN---APLGHSVIH 663
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTG 110
+ A D D + + Y LT G+ +D P F IN TG
Sbjct: 664 IQAVDADHGENSRLEYSLT--GVASDTP----FVINSATG 697
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 14 LIYELTLVASDS---LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK 70
+ Y L + A D+ + T V + +NDVND P F S Y ++ E+ P P+ S+L+
Sbjct: 916 VTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP-PFT-SVLQ 973
Query: 71 VLATDGDKDRQNNIVY-FLTGQGIDADNPGNSKFDINRTTG 110
+ ATD D + Y F G+ D D F I T+G
Sbjct: 974 ISATDRDAHANGRVQYTFQNGEDGDGD------FTIEPTSG 1008
Score = 38.1 bits (87), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTG 90
T V + + D ND PVF + Y + E + YP +L++ ATDGD N+ Y G
Sbjct: 408 TMVAVTVADRNDHAPVFEQAQYRETLRENVEEGYP--ILQLRATDGDAPPNANLRYRFVG 465
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 11/105 (10%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATD 75
++L L ASD + V I+I D N PVF ++ Y M E+ P +++ + A+D
Sbjct: 818 FKLVLTASDRALHDHCYVHINITDANTHRPVFQSAHYSVSMNEDR--PVGSTVVVISASD 875
Query: 76 GDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFF-APLIY 119
D I Y L DN +F I+ +G I APL Y
Sbjct: 876 DDVGENARITYLL------EDNL--PQFRIDADSGAITLQAPLDY 912
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus
GN=Celsr3 PE=2 SV=2
Length = 3301
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 20/111 (18%)
Query: 16 YELTLVASDSLNE---NKTTVVIHIN--DVNDMPPVFNTSLYPAIMEEELPGPYPHSL-L 69
YEL + ASD E TV +HI D ND P F+ Y A + E++ PH++ L
Sbjct: 500 YELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVREDV---RPHTVVL 556
Query: 70 KVLATDGDKDRQNNIVYFLTGQGIDADNPGNSK--FDINRTTGEI-FFAPL 117
+V ATD DKD + Y + GNS+ F I+ TGEI APL
Sbjct: 557 RVTATDKDKDANGLVHYNIIS--------GNSRGHFAIDSLTGEIQVMAPL 599
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 16 YELTLVASDS----LNENKTTVVIHINDVNDMPPVF-NTSLYPAIMEEELPGPYPHSLLK 70
Y L + A D+ L+ N I + D+ND P+F +T +++E P HS++
Sbjct: 607 YALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLEN---APLGHSVIH 663
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTG 110
+ A D D + + Y LT G+ +D P F IN TG
Sbjct: 664 IQAVDADHGENSRLEYSLT--GVASDTP----FVINSATG 697
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 14 LIYELTLVASDS---LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK 70
+ Y L + A D+ + T V + +NDVND P F S Y ++ E+ P P+ S+L+
Sbjct: 916 VTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP-PFT-SVLQ 973
Query: 71 VLATDGDKDRQNNIVY-FLTGQGIDADNPGNSKFDINRTTG 110
+ ATD D + Y F G+ D D F I T+G
Sbjct: 974 ISATDRDAHANGRVQYTFQNGEDGDGD------FTIEPTSG 1008
Score = 38.1 bits (87), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTG 90
T V + + D ND PVF + Y + E + YP +L++ ATDGD N+ Y G
Sbjct: 408 TMVAVTVADRNDHAPVFEQAQYRETLRENVEEGYP--ILQLRATDGDAPPNANLRYRFVG 465
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 11/105 (10%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATD 75
++L L ASD + V I+I D N PVF ++ Y M E+ P +++ + A+D
Sbjct: 818 FKLVLTASDRALHDHCYVHINITDANTHRPVFQSAHYSVSMNEDR--PVGSTVVVISASD 875
Query: 76 GDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFF-APLIY 119
D I Y L DN +F I+ +G I APL Y
Sbjct: 876 DDVGENARITYLL------EDNL--PQFRIDADSGAITLQAPLDY 912
>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens
GN=CELSR3 PE=1 SV=2
Length = 3312
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 20/111 (18%)
Query: 16 YELTLVASDSLNE---NKTTVVIHIN--DVNDMPPVFNTSLYPAIMEEELPGPYPHSL-L 69
YEL + ASD E TV +HI D ND P F+ Y A + E++ PH++ L
Sbjct: 509 YELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVREDV---RPHTVVL 565
Query: 70 KVLATDGDKDRQNNIVYFLTGQGIDADNPGNSK--FDINRTTGEI-FFAPL 117
+V ATD DKD + Y + GNS+ F I+ TGEI APL
Sbjct: 566 RVTATDRDKDANGLVHYNIIS--------GNSRGHFAIDSLTGEIQVVAPL 608
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 14 LIYELTLVASDS---LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK 70
+ Y L + A D+ + T V + +NDVND P F S Y ++ E+ P P+ S+L+
Sbjct: 925 VTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP-PFT-SVLQ 982
Query: 71 VLATDGDKDRQNNIVY-FLTGQGIDADNPGNSKFDINRTTG 110
+ ATD D + Y F G+ D D F I T+G
Sbjct: 983 ISATDRDAHANGRVQYTFQNGEDGDGD------FTIEPTSG 1017
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 16 YELTLVASDS----LNENKTTVVIHINDVNDMPPVF-NTSLYPAIMEEELPGPYPHSLLK 70
Y L + A D+ L+ N I + D+ND P+F +T +++E P HS++
Sbjct: 616 YALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLEN---APLGHSVIH 672
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTG 110
+ A D D + Y LT G+ D P F IN TG
Sbjct: 673 IQAVDADHGENARLEYSLT--GVAPDTP----FVINSATG 706
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTG 90
T V + + D ND PVF + Y + E + YP +L++ ATDGD N+ Y G
Sbjct: 417 TMVAVTVADRNDHSPVFEQAQYRETLRENVEEGYP--ILQLRATDGDAPPNANLRYRFVG 474
Score = 36.6 bits (83), Expect = 0.051, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 11/105 (10%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATD 75
++L L ASD + V I+I D N PVF ++ Y + E+ P +++ + A+D
Sbjct: 827 FKLVLTASDRALHDHCYVHINITDANTHRPVFQSAHYSVSVNEDR--PMGSTIVVISASD 884
Query: 76 GDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFF-APLIY 119
D I Y L DN +F I+ +G I APL Y
Sbjct: 885 DDVGENARITYLL------EDNL--PQFRIDADSGAITLQAPLDY 921
>sp|Q6V1P9|PCD23_HUMAN Protocadherin-23 OS=Homo sapiens GN=DCHS2 PE=2 SV=1
Length = 2916
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATD 75
YEL + SDS++ + +V+ + DVND PPVF+ Y + E +P Y S+L + ATD
Sbjct: 1961 YELLIQISDSVHYTEGALVVRVLDVNDNPPVFSQDFYQVTVPESIPVGY--SVLTLSATD 2018
Query: 76 GDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
+ + NI Y + + +F I+ G IF
Sbjct: 2019 LESNE--NISYRILS--------SSKEFSIDPKNGTIF 2046
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 14/81 (17%)
Query: 33 VVIHINDVNDMPPVFNTSLY-PAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQ 91
V + + DVND PVFN S Y +I +E PG ++ VLATD D + Y L
Sbjct: 163 VRVDLEDVNDNHPVFNPSTYVTSISDETQPGT---EIINVLATDQDSGIYGTVAYELI-- 217
Query: 92 GIDADNPGN--SKFDINRTTG 110
PGN S F I+ TTG
Sbjct: 218 ------PGNVSSLFTIDSTTG 232
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 29 NKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKVLATDGDKDRQNNIVYF 87
+ T+ + + DVND PVF LY A + E + PG + + +V A D D + + +
Sbjct: 1251 SSQTLTVTVLDVNDEAPVFKQHLYEASVKENQNPGEF---VTRVEALDRDSGVNSKLQFE 1307
Query: 88 LTGQGIDADNPGNS--KFDINRTTGEI 112
+ PG S F+IN TGE+
Sbjct: 1308 IM--------PGASFELFEINSDTGEV 1326
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 26 LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLL-KVLATDGDKDRQNNI 84
L TTV++ + D ND P F L+ + + P P ++ K+ A D D + +
Sbjct: 671 LQNVSTTVIVRVWDENDNSPTF---LHDVLFLKVEESPVPQGVIGKITAIDMDSGKNGQL 727
Query: 85 VYFLTGQG 92
+YFL G
Sbjct: 728 LYFLLSDG 735
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 17 ELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKVLATD 75
+L ++A S + V + I D ND P F S+Y A + E +L Y +++V ATD
Sbjct: 1757 QLIVLAESSGHRAYCKVAVLIQDENDNSPCFEQSIYQASVSESQL---YNAHVIQVFATD 1813
Query: 76 GDKDRQNNIVY-FLTGQGIDADNPGNSKFDINRTTGEI 112
D I Y L+G +A F I+ +G I
Sbjct: 1814 LDSGLNGLIEYSILSGNQEEA-------FQIDALSGVI 1844
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 29 NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFL 88
N T + + + D+ND P F S I E+ LPG ++ + D D + ++
Sbjct: 1874 NTTVIKVQVTDINDNAPAFLPSEAVEITEDSLPG-----VIVTHVSVHDVDLNSAFIFSF 1928
Query: 89 TGQGIDADNPGNSKFDINRTTG 110
+ NPG +KF I++ TG
Sbjct: 1929 AKES----NPG-TKFAIDQNTG 1945
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 18/111 (16%)
Query: 16 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP-GPYPHSLLKV 71
+EL ++ASDS + + I + DVND PP F++ Y ++E P G + + V
Sbjct: 2176 HELVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSH---ITVV 2232
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSK--FDINRTTGEIFF-APLIY 119
A D D I+Y + GN K F + TG ++ PL Y
Sbjct: 2233 SANDRDTGSHAEIIYNIIS--------GNEKGHFYLEENTGVLYLIKPLDY 2275
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTG 90
TT++ + D ND P F S Y E L P + VLA+D D + Y +
Sbjct: 1358 TTILCTVEDENDHAPEFIVSSYDI---EVLENQEPEVVYTVLASDMDAGNNRAVEYHII- 1413
Query: 91 QGIDADNPGNSKFDINRTTGEI 112
D + F IN +GE+
Sbjct: 1414 -----DGNTDECFTINEMSGEL 1430
>sp|Q9Y5G2|PCDGE_HUMAN Protocadherin gamma-B2 OS=Homo sapiens GN=PCDHGB2 PE=2 SV=1
Length = 931
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 15 IYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKV 71
+++L L A D + T + I + D ND PPVF+ +Y + E++P + +L+V
Sbjct: 207 LHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLREDVPPGF--FVLQV 264
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
ATD D+ I Y + D F++N TGEI
Sbjct: 265 TATDRDEGINAEITYSFH----NVDEQVKHFFNLNEKTGEI 301
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 16 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKV 71
Y LT+ A+D + V +HI+DVND PVF + Y + E PG S+ ++
Sbjct: 418 YNLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGA---SIAQI 474
Query: 72 LATDGDKDRQNNIVY 86
A+D D + Y
Sbjct: 475 SASDPDLGPSGQVSY 489
>sp|Q9H251|CAD23_HUMAN Cadherin-23 OS=Homo sapiens GN=CDH23 PE=1 SV=2
Length = 3354
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 16 YELTLVASDSLNENKT---TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y+L +VASD+ K+ T+ IH+ DVND P F ++Y + E++P + L
Sbjct: 961 YQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLN-- 1018
Query: 73 ATDGDKDRQNNIVYFLTGQGIDA 95
TD D + YF+TG +D
Sbjct: 1019 CTDNDVGLNAELSYFITGGNVDG 1041
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 16 YELTLVASDS-------LNENKTTVVIHINDVNDMPPVFNTSLYP-AIMEEELPGPYPHS 67
Y LT +A D+ EN VVI + DVND P F+ + ++ E E P S
Sbjct: 2471 YILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSVYENE---PAGTS 2527
Query: 68 LLKVLATDGDKDRQNNIVYFLTGQGIDA 95
++ ++ATD D+ + Y L G G++A
Sbjct: 2528 VITMMATDQDEGPNGELTYSLEGPGVEA 2555
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 20/112 (17%)
Query: 14 LIYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLY-PAIMEEELPGPYPHSLL 69
LIY LT++A D+ N + V I + D ND PP F+ Y +++E + G ++L
Sbjct: 636 LIY-LTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIMAGA---TVL 691
Query: 70 KVLATDGDKDR---QNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118
+ ATD D+ R Q +I+Y L G+++F IN +GEI L+
Sbjct: 692 FLNATDLDRSREYGQESIIYSL---------EGSTQFRINARSGEITTTSLL 734
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 32 TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY-FLTG 90
TV + + DVND P+F S Y A + E++ P HS+L++ ATD D+ + Y L G
Sbjct: 1087 TVFVTVLDVNDNRPIFLQSSYEASVPEDI--PEGHSILQLKATDADEGEFGRVWYRILHG 1144
Query: 91 QGIDADNPGNSKFDINRTTGEIFFAP 116
N GN+ F I+ + G + P
Sbjct: 1145 ------NHGNN-FRIHVSNGLLMRGP 1163
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK--VLATDGDKDRQNNIVYFLTG 90
++I ++D ND P+F S Y A + E P P ++L +LA D D+D + Y L G
Sbjct: 1945 LLIFLSDENDNHPLFTKSTYQAEVMENSPAGTPLTVLNGPILALDADQDIYAVVTYQLLG 2004
Query: 91 QGIDADNPGNSKFDINRTTGEI 112
+ FDIN +TG +
Sbjct: 2005 -------AQSGLFDINSSTGVV 2019
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92
V + I D+ND P+F+ Y + E++ P +L V ATD D I Y L
Sbjct: 2388 VYLEIVDINDNNPIFDQPSYQEAVFEDV--PVGTIILTVTATDADSGNFALIEYSL---- 2441
Query: 93 IDADNPGNSKFDINRTTGEIF 113
G SKF IN TTG+I+
Sbjct: 2442 ----GDGESKFAINPTTGDIY 2458
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 16 YELTLVASDSLNENKT-TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74
+ LT++A D E T V I++ DVND P F Y + E P L+++ AT
Sbjct: 529 FTLTIIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPS--VTQLVRLRAT 586
Query: 75 DGDKDRQNNIVY 86
D D N I Y
Sbjct: 587 DEDSPPNNQITY 598
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 28 ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY- 86
+ V++++ D+ND PVF Y + E G S++ V ATD D + Y
Sbjct: 1189 RSSVRVIVYVEDINDEAPVFTQQQYSRLGLRETAG-IGTSVIVVQATDRDSGDGGLVNYR 1247
Query: 87 FLTGQGIDADNPGNSKFDINRTTGEIF 113
L+G KF+I+ +TG I
Sbjct: 1248 ILSG--------AEGKFEIDESTGLII 1266
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 16 YELTLVASDSLNENK--TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLA 73
Y+ L A++S+ ++ V I + + ND P+F+ LY + E + S+L VLA
Sbjct: 427 YDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNISLYENVT--VGTSVLTVLA 484
Query: 74 TDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFF 114
TD D + YF +D+P +F +++ TG I
Sbjct: 485 TDNDAGTFGEVSYFF------SDDP--DRFSLDKDTGLIML 517
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 15 IYELTLVASD-SLNENKTTVVIHINDVNDMPPVFN-TSLYPAIMEEELPGPYPHSLLKVL 72
I EL L+A D L + ++I I D ND P F+ +L ++E PG S+L+V
Sbjct: 2036 ILELLLLAEDIGLLNSTAHLLITILDDNDNRPTFSPATLTVHLLENCPPG---FSVLQVT 2092
Query: 73 ATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
ATD D +VY + D +F I+ TG I
Sbjct: 2093 ATDEDSGLNGELVYRIEAGAQD-------RFLIHLVTGVI 2125
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 18 LTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGD 77
L LVA +L E V + + D+ND PP F + Y A + + L++VLA D D
Sbjct: 2821 LDLVADLTLQE----VRVVLEDINDQPPRFTKAEYTAGVATD--AKVGSELIQVLALDAD 2874
Query: 78 KDRQNNIVYF 87
N++V++
Sbjct: 2875 IG-NNSLVFY 2883
>sp|Q5DRA9|PCDGE_PANTR Protocadherin gamma-B2 OS=Pan troglodytes GN=PCDHGB2 PE=3 SV=1
Length = 931
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 15 IYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKV 71
+++L L A D + T + + + D ND PPVF+ +Y + E++P + +L+V
Sbjct: 207 LHQLVLTAVDGGDPPQSGTTQIRVKVTDANDNPPVFSQDVYRVTLREDVPPGF--FVLQV 264
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
ATD D+ I Y + D F++N TGEI
Sbjct: 265 TATDRDEGVNAEITYSFH----NVDEQVKHFFNLNEKTGEI 301
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 16 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKV 71
Y LT+ A+D + V +HI+DVND PVF + Y + E PG S+ ++
Sbjct: 418 YNLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGA---SIAQI 474
Query: 72 LATDGDKDRQNNIVY 86
A+D D + Y
Sbjct: 475 SASDPDLGPNGQVSY 489
>sp|Q5DRA7|PCDGH_PANTR Protocadherin gamma-B5 OS=Pan troglodytes GN=PCDHGB5 PE=3 SV=1
Length = 923
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 17/102 (16%)
Query: 16 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
+ L L A D N T + I + D ND PPVFN +Y + E +P ++L+V
Sbjct: 208 HRLVLTALDGGNPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRENVPPGT--TVLQVS 265
Query: 73 ATDGDKDRQNNIVY--FLTGQGIDADNPGNSKFDINRTTGEI 112
ATD D+ + I Y + TGQ F +N +GEI
Sbjct: 266 ATDQDEGINSEITYSFYRTGQ----------IFSLNSKSGEI 297
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 16 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLY-PAIMEEELPGPYPHSLLKV 71
Y +T+ A+D + +V++HI DVND PVF+ + Y ++ E PG S+ +V
Sbjct: 414 YNVTITATDRGKPPLSSSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGA---SIAQV 470
Query: 72 LATDGDKDRQNNIVYFLTGQGID 94
A+D D + Y + ++
Sbjct: 471 CASDLDLGLNGQVSYSIMASDLE 493
>sp|Q6V0I7|FAT4_HUMAN Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2
Length = 4981
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 32 TVVIHINDVNDMPPVFNTSLYPAIMEEEL-PGPYPHSLLKVLATDGDKDRQNNIVY-FLT 89
++VI +ND+ND PPVF+ +Y + EE PG Y + + ATDGD N+ Y ++
Sbjct: 460 SLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSY---VSGISATDGDSGLNANLRYSIVS 516
Query: 90 GQGI 93
G G+
Sbjct: 517 GNGL 520
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 16 YELTLVASDSLNENKT---TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y LT+ A+D + +T TV I + D+ND PVF S Y + E L G P ++L+V+
Sbjct: 2225 YHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENL-GTLPRTILQVV 2283
Query: 73 ATDGDKDRQNNIVYFLTG 90
A D D+ + + Y L G
Sbjct: 2284 ARDDDRGSNSKLSYVLFG 2301
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 18/102 (17%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLY----PAIMEEELPGPYPHSLLKV 71
Y + + A DS T V I + D+ND P F+ + Y P + E + +V
Sbjct: 2841 YRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRTSYYLDCPELTE------IGSKVTQV 2894
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
ATD D+ + YF+ Q + F IN TTGEIF
Sbjct: 2895 FATDPDEGSNGQVFYFIKSQ--------SEYFRINATTGEIF 2928
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 13/104 (12%)
Query: 16 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKV 71
Y LT+VA+D + T VV+ + D+ND P+F +LY I E L G +++V
Sbjct: 2120 YTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGT---DIIQV 2176
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA 115
A DGD+ + Y GI N N +F I+ TG I A
Sbjct: 2177 FAADGDEGTNGQVRY-----GIVNGNT-NQEFRIDSVTGAITVA 2214
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 33 VVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQ 91
V + + D+ND PPVF +S Y A + E+ + G S+L+V A D D+ +I Y L +
Sbjct: 236 VNVTVQDINDNPPVFGSSHYQAGVPEDAVVG---SSVLQVAAADADEGTNADIRYRLQDE 292
Query: 92 G 92
G
Sbjct: 293 G 293
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 16 YELTLVASDSLNENKT---TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
+ L + A+DS + T T+ + ++DVND P F + Y + E+ P +L V
Sbjct: 2330 FVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPED--APTGTDVLLVN 2387
Query: 73 ATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118
A+D D + N V + G GNS+F IN +TG+I + L+
Sbjct: 2388 ASDADASK--NAVIRIIG--------GNSQFTINPSTGQIITSALL 2423
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYP-AIMEEELPGPYPHSLLKVLAT 74
Y L + A D L + + I ++DVND P F+ +Y I E+ +PG + +LAT
Sbjct: 1810 YSLLVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSL---VAAILAT 1866
Query: 75 DGDKDRQNNIVYFLT---GQGIDADNPGNSKFDINR 107
D D I Y + GI NP F++ R
Sbjct: 1867 DDDSGVNGEITYIVNEDDEDGIFFLNPITGVFNLTR 1902
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 15 IYELTLVASDSLN---ENKTTVVIHINDVNDMPPVF-NTSLYPAIMEEELPGPYPHSLLK 70
+Y+L + A D + +VVIH+ D ND PP F ++ +I+E P S++
Sbjct: 1385 LYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENI---PIGTSVIS 1441
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
V A D D D + Y + Q P + F I+ G I+
Sbjct: 1442 VTAHDPDADINGQLSYTIIQQ-----MPRGNHFTIDEVKGTIY 1479
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 16 YELTLVASDSLN----ENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLK 70
Y L +V SD+ + + T+V++ + DVND PP F Y I LPG + +
Sbjct: 2431 YTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSF---VFA 2487
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA 115
V TD D + + Y L+G+ + KF I+ G I A
Sbjct: 2488 VTVTDADIGPNSELHYSLSGR-------NSEKFHIDPLRGAIMAA 2525
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 16 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y+L +VA+D N N+ V I + D D PPVF+ Y ++ E + Y + V
Sbjct: 759 YQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGY--HVGSVS 816
Query: 73 ATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118
A+ D +NI Y +T D G F IN+ TG++ A +I
Sbjct: 817 AS--TMDLNSNISYLIT----TGDQKG--MFAINQVTGQLTTANVI 854
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 13 TLIYELTLVASDSLN----ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSL 68
T ++ T++A+D +++ TV +++ D+ND P F Y A + E +
Sbjct: 1172 TAVFSFTVIATDQGIPQPLKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLT--QV 1229
Query: 69 LKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
L+V A+D D+ N ++++ +G + +F I+ T+G++
Sbjct: 1230 LRVSASDVDEG-NNGLIHYSIIKGNE-----ERQFAIDSTSGQV 1267
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 16 YELTLVASD-SLNENKTTVV--IHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y++ ++ASD + + ++V+ ++++DVND PVF+ Y + E P KV
Sbjct: 962 YQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSES--EPVNSRFFKVQ 1019
Query: 73 ATDGDKDRQNNIVY 86
A+D D I Y
Sbjct: 1020 ASDKDSGANGEIAY 1033
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 12/104 (11%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKVLAT 74
Y+L +VAS T V I + D+ND P F ++ ++E G HS+ + A
Sbjct: 862 YQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAG---HSIFQAKAV 918
Query: 75 DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI-FFAPL 117
D D+ ++Y L NP N F IN G I PL
Sbjct: 919 DPDEGVNGMVLYSL------KQNPKN-LFAINEKNGTISLLGPL 955
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 16 YELTLVASDSLNENKTTVVIHIN--DVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLA 73
Y LT+ A D + TT+ ++ N DVND PP+F+ + Y + E L P ++L
Sbjct: 1912 YILTVRAEDGGGQ-FTTIRVYFNILDVNDNPPIFSLNSYSTSLMENL--PVGSTVLVFNV 1968
Query: 74 TDGDKDRQNNIVY 86
TD D + + Y
Sbjct: 1969 TDADDGINSQLTY 1981
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 16 YELTLVASDSLNE---NKTTVVIHINDVNDMPPVFNTSLYPAIMEEE-LPGPYPHSLLKV 71
Y L +VASD E V + + DVND P+FN++ Y EEE G + + KV
Sbjct: 1066 YVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSF---VGKV 1122
Query: 72 LATDGD 77
A D D
Sbjct: 1123 SAVDKD 1128
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 16 YELTLVASDSLNENKT---TVVIHINDVNDMPPVF-NTSLYPAIMEEELPGPYPHSLLKV 71
+E+T+ A D +T +V +++ DVND PVF + +P ++E P +++ +
Sbjct: 3160 HEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLEN---APSGTTVIHL 3216
Query: 72 LATDGDKDRQNNIVYFLTGQGIDAD 96
ATD D I Y T Q D+D
Sbjct: 3217 NATDADSGTNAVIAY--TVQSSDSD 3239
>sp|Q5DRB0|PCDGD_PANTR Protocadherin gamma-B1 OS=Pan troglodytes GN=PCDHGB1 PE=3 SV=1
Length = 927
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTG 90
T + I + D ND PVF+ +Y ++E + P+ S+L+V+ATD D+ I Y
Sbjct: 223 THIWIRVTDANDNAPVFSQEVYRVSLQENV--PWGTSVLRVMATDQDEGINAEITYAFLN 280
Query: 91 QGIDADNPGNSKFDINRTTGEI 112
I S F++N TG+I
Sbjct: 281 SPI-----STSLFNLNPNTGDI 297
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 13 TLIYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLL 69
T Y +T++A+D ++T++ +HI+D+ND PVF+ + Y + E P S+
Sbjct: 411 TADYNVTIIATDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSEN--NPPGASIA 468
Query: 70 KVLATDGD 77
+V A+D D
Sbjct: 469 QVSASDPD 476
>sp|Q9Y5G3|PCDGD_HUMAN Protocadherin gamma-B1 OS=Homo sapiens GN=PCDHGB1 PE=2 SV=1
Length = 927
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTG 90
T + I + D ND PVF+ +Y ++E + P+ S+L+V+ATD D+ I Y
Sbjct: 223 THIWIRVTDANDNAPVFSQEVYRVSLQENV--PWGTSVLRVMATDQDEGINAEITYAFLN 280
Query: 91 QGIDADNPGNSKFDINRTTGEI 112
I S F++N TG+I
Sbjct: 281 SPI-----STSLFNLNPNTGDI 297
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 13 TLIYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLL 69
T Y +T++A+D ++T++ +HI+D+ND PVF+ + Y + E P S+
Sbjct: 411 TADYNVTIIATDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSEN--NPPGASIA 468
Query: 70 KVLATDGDKDRQNNIVY 86
+V A+D D + Y
Sbjct: 469 QVSASDPDLGPNGRVSY 485
>sp|Q9Y5G0|PCDGH_HUMAN Protocadherin gamma-B5 OS=Homo sapiens GN=PCDHGB5 PE=2 SV=1
Length = 923
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 14/84 (16%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY--FL 88
T + I + D ND PPVFN +Y + E +P ++L+V ATD D+ + I Y +
Sbjct: 226 TELRIQVTDANDNPPVFNRDVYRVSLRENVPPGT--TVLQVSATDQDEGINSEITYSFYR 283
Query: 89 TGQGIDADNPGNSKFDINRTTGEI 112
TGQ F +N +GEI
Sbjct: 284 TGQ----------IFSLNSKSGEI 297
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 16 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLY-PAIMEEELPGPYPHSLLKV 71
Y +T+ A+D + +V++HI DVND PVF+ + Y ++ E PG S+ +V
Sbjct: 414 YNVTITATDRGKPPLSSSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGA---SIAQV 470
Query: 72 LATDGDKDRQNNIVYFLTGQGID 94
A+D D + Y + ++
Sbjct: 471 CASDLDLGLNGQVSYSIMASDLE 493
>sp|Q9Y5F6|PCDGM_HUMAN Protocadherin gamma-C5 OS=Homo sapiens GN=PCDHGC5 PE=2 SV=1
Length = 944
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 16 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKV 71
Y + L+ASD+ + T+ ++I+DVND P FN LY A I+E PG L V
Sbjct: 420 YIIELLASDAGSPSLHKHLTIRLNISDVNDNAPRFNQQLYTAYILENRPPGSL---LCTV 476
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
A+D D + Y + G + P +S +N G IF
Sbjct: 477 AASDPDTGDNARLTYSIVGNQVQG-APASSFVYVNPEDGRIF 517
>sp|A7MB46|PCD18_BOVIN Protocadherin-18 OS=Bos taurus GN=PCDH18 PE=2 SV=1
Length = 1134
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 15/97 (15%)
Query: 16 YELTLVASDSLNENKTTV---VIHINDVNDMPPVFNTSLYP-AIMEEELPGPYPHSLLKV 71
Y LT++A D + +TV + IND+ND PP F S Y AI E PG Y + V
Sbjct: 431 YSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFAISENNSPGAY---ITTV 487
Query: 72 LATDGDKDRQNNIVY-----FLTGQGI---DADNPGN 100
ATD D + Y F+ G I D +P N
Sbjct: 488 TATDPDLGENGQVTYTILESFILGSSITTYDTIDPSN 524
>sp|Q5DRB2|PCDG8_PANTR Protocadherin gamma-A8 OS=Pan troglodytes GN=PCDHGA8 PE=3 SV=1
Length = 932
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 15 IYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLK 70
IY +T++ASD +T + +H+ D+ND PP F + Y A I+E L G S+
Sbjct: 417 IYNITVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGA---SIFS 473
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
+ A D D + Y +T + P +S IN TG ++
Sbjct: 474 LTAHDPDSQENAQVTYSVTEDTLQG-APLSSYISINSDTGVLY 515
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Query: 16 YELTLVASDSLNENKT-TVVIHIN--DVNDMPPVFNTSLYPAIMEEELPGPYPHS-LLKV 71
+ L L ASD ++ TV IH+ D ND PVF +Y + E +P P + LL V
Sbjct: 208 HHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVLENMP---PGTRLLTV 264
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA 115
A+D D+ + Y + F +N TGEI A
Sbjct: 265 TASDPDEGINGKVAYKFR----KINEKQTPLFQLNENTGEISIA 304
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 16 YELTLVASD-SLNENKTTVVIHINDVND-MPPVFNTSLYPAIMEEELPG 62
YE+ + A D +T ++I + DVND P V TSL+ ++E LPG
Sbjct: 315 YEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPG 363
>sp|Q9Y5G5|PCDG8_HUMAN Protocadherin gamma-A8 OS=Homo sapiens GN=PCDHGA8 PE=2 SV=1
Length = 932
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 15 IYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLK 70
IY +T++ASD +T + +H+ D+ND PP F + Y A I+E L G S+
Sbjct: 417 IYNITVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGA---SIFS 473
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
+ A D D + Y +T + P +S IN TG ++
Sbjct: 474 LTAHDPDSQENAQVTYSVTEDTLQG-APLSSYISINSDTGVLY 515
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 16 YELTLVASDSLNE-NKTTVVIHIN--DVNDMPPVFNTSLYPAIMEEELPGPYPHS-LLKV 71
+ L L ASD +TV IH+ D ND PVF +Y + E +P P + LL V
Sbjct: 208 HHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVLENMP---PGTRLLTV 264
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA 115
A+D D+ + Y + F +N TGEI A
Sbjct: 265 TASDPDEGINGKVAYKFR----KINEKQTPLFQLNENTGEISIA 304
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 16 YELTLVASD-SLNENKTTVVIHINDVND-MPPVFNTSLYPAIMEEELPG 62
YE+ + A D +T ++I + DVND P V TSL+ ++E LPG
Sbjct: 315 YEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPG 363
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATD 75
Y L + ASD ++ +V+++ D N PVF +S Y + E+ P +++ + ATD
Sbjct: 681 YVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGT--TVVLISATD 738
Query: 76 GDKDRQNNIVYFLTGQ----GIDAD 96
D I YF+ IDAD
Sbjct: 739 EDTGENARITYFMEDSIPQFRIDAD 763
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 32 TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY-FLTG 90
T+ I + D ND PVF Y + E L Y +L V ATDGD NI+Y L G
Sbjct: 274 TLTILVTDTNDHDPVFEQQEYKESLRENLEVGY--EVLTVRATDGDAPPNANILYRLLEG 331
Query: 91 QG 92
G
Sbjct: 332 SG 333
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92
V + + D+ND P+F ++ + A + E +P Y +L V A D D + Y L G G
Sbjct: 491 VTVQVLDINDNAPIFVSTPFQATVLESVPLGY--LVLHVQAIDADAGDNARLEYRLAGVG 548
Query: 93 IDADNPGNSKFDINRTTGEIFFA 115
D F IN TG I A
Sbjct: 549 HDF------PFTINNGTGWISVA 565
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92
V + + DVND PPVF + +EE P ++ +V ATD D+ I+Y Q
Sbjct: 907 VTVTVLDVNDNPPVFEQDEFDVFVEEN--SPIGLAVARVTATDPDEGTNAQIMY----QI 960
Query: 93 IDADNPGNSKFDI 105
++ + P + DI
Sbjct: 961 VEGNIPEVFQLDI 973
Score = 33.5 bits (75), Expect = 0.39, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 16 YELTLVASDS---LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y L + A D+ + T + I +NDVND P F Y + E++P P+ S+L++
Sbjct: 781 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVP-PFT-SVLQIS 838
Query: 73 ATDGDKDRQNNIVY 86
ATD D + Y
Sbjct: 839 ATDRDSGLNGRVFY 852
>sp|O35161|CELR1_MOUSE Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus
GN=Celsr1 PE=2 SV=3
Length = 3034
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 16 YELTLVASDS----LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKV 71
Y L + A D L + V + + DVND P+F +S + A + E + P HS+L +
Sbjct: 545 YTLRIKAQDGGRPPLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENV--PLGHSVLHI 602
Query: 72 LATDGDKDRQNNIVYFLT--------GQGIDADNPGNS---KFDINRTTGEI 112
A D D + Y L G +D++NP ++ F I+ ++G I
Sbjct: 603 QAVDADAGENARLQYRLVDTASTIVGGSSVDSENPASAPDFPFQIHNSSGWI 654
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATD 75
Y L + ASD + V I++ D N PVF +S Y + E+ P S+ + ATD
Sbjct: 773 YVLAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSEDR--PVGTSIATISATD 830
Query: 76 GDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
D I Y L ++P +F I+ TG I+
Sbjct: 831 EDTGENARITYVL-------EDP-VPQFRIDPDTGTIY 860
Score = 35.8 bits (81), Expect = 0.091, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 31 TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY-FLT 89
T + + ++D ND PVF S Y + E L Y +L + ATDGD N+ Y L
Sbjct: 352 TYLTVTVSDTNDHSPVFEQSEYRERIRENLEVGY--EVLTIRATDGDAPSNANMRYRLLE 409
Query: 90 GQG 92
G G
Sbjct: 410 GAG 412
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 15 IYELTLVASDSLNENKTTVVIHIN----DVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK 70
+Y L +A D + N + + I D+ND PPVF +EE P + +
Sbjct: 978 VYNLWALAVDRGSPNPLSASVGIQVSVLDINDNPPVFEKDELELFVEEN--SPVGSVVAR 1035
Query: 71 VLATDGDKDRQNNIVY 86
+ A D D+ I+Y
Sbjct: 1036 IRANDPDEGPNAQIMY 1051
>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft
PE=1 SV=3
Length = 5147
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 16 YELTLVASDSLNENKTT---VVIHINDVNDMPPVFNTSLYPAIMEEELP-GPYPHSLLKV 71
Y LT+VA D +TT ++I +NDVND PVF S Y A++ E P G + + +
Sbjct: 460 YNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSF---VASI 516
Query: 72 LATDGD 77
ATD D
Sbjct: 517 TATDED 522
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 16 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y LTLVA D+ + V + + D+ND PVF Y A + E LP +L
Sbjct: 2457 YTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPSGT--HVLTPR 2514
Query: 73 ATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA 115
ATD D+ + + L G+ + +F I+ TGEI A
Sbjct: 2515 ATDKDEGLNAKLRFNLLGEHM-------HRFHIDSETGEISTA 2550
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 13 TLIYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSL 68
T +YE+ + A+D + T + +++ D ND PV +Y A ++EEE P P +
Sbjct: 2773 THLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNAEVLEEESP---PQLI 2829
Query: 69 LKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
V A+D D N++Y L N + F+I +GEI+
Sbjct: 2830 AVVKASDRDSGDNGNVIYRL-------QNDFDGTFEITE-SGEIY 2866
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 19/103 (18%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLY----PAIMEE-ELPGPYPHSLLK 70
Y L +VASD +T + I I D ND P F S Y P + + L G +
Sbjct: 2982 YILKVVASDGAWRAETPITITIQDQNDNAPEFEHSFYSFSFPELQQSIALVG-------Q 3034
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
++ATD DK N+++ + Q + F I+ TGE+F
Sbjct: 3035 IIATDRDKQGPNSVISYSLQQ-------PSPMFSIDPATGEVF 3070
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATD 75
YEL + SD + + I ++D ND PP+F ++Y + E Y + +++A D
Sbjct: 1891 YELRIRVSDGVQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGY--QVGQIVARD 1948
Query: 76 GDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTG 110
D + + Y G+ +D N F +N TG
Sbjct: 1949 ADLGQNAQLSY-----GVVSD-WANDVFSLNPQTG 1977
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 15/103 (14%)
Query: 13 TLIYELTLVASDS-LNENKTTVV---IHINDVNDMPPVFNTSLYPAIMEEEL-PGPYPHS 67
T +Y LTL+A DS + E + + V I ++DVND P F+++ Y + E + G +
Sbjct: 2558 TSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERISKGEF--- 2614
Query: 68 LLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTG 110
+ A D D D +N +V++ T G D FDIN TG
Sbjct: 2615 VFGARALDLD-DGENAVVHY-TISGRD-----QHYFDINTKTG 2650
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 13/108 (12%)
Query: 16 YELTLVASDSLNEN----KTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLK 70
Y LT+ A D EN + I+I D+ND P F S Y A +ME +P P +L
Sbjct: 2349 YSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLARVMENTVP-PNGGYVLT 2407
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI-FFAPL 117
V A D D N+ V + +G D+D F IN ++G+I PL
Sbjct: 2408 VNAYDADTPPLNSQVRYFLKEG-DSD-----LFRINASSGDIALLKPL 2449
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 16 YELTLVASDSLNENKTTVVIH---INDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y L + ASD + +T V++ + D ND PP+F ++ ++E +P P ++ V
Sbjct: 1455 YTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIPLKTP--IVTVT 1512
Query: 73 ATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
A D D + Y ++ Q + P F IN TG I
Sbjct: 1513 ADDPDSGLNGKVSYAISKQ--EPQLPQGRHFGINTETGVI 1550
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 33 VVIHINDVNDMPPVFNTSLY-PAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFL 88
V + I DVND PP+F+ S Y ++ E LPG ++ V+A+D D + I Y+L
Sbjct: 256 VNVTILDVNDNPPIFDHSDYNVSLNETALPGT---PVVTVMASDNDLGDNSKITYYL 309
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 16 YELTLVASDSLNENKTTVV---IHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y LT+ D+ ++++VV IH+ D ND P F S + + E P + K+
Sbjct: 1119 YALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADT--FVGKLT 1176
Query: 73 ATDGDKDRQNNIVYFLTGQGID 94
A D D R + + L+ Q D
Sbjct: 1177 AVDRDIGRNAELSFTLSSQTQD 1198
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 18/110 (16%)
Query: 16 YELTLVASD-------SLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHS- 67
+ LT+VA+D L+ K VI + D+ND PVF S+ AI+ + S
Sbjct: 1564 FRLTVVATDRAQPSERQLSTEKLVTVI-VEDINDNAPVF-VSMNAAILPPKFSTSKGSST 1621
Query: 68 -LLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAP 116
+++V A D D + Y + P F + R TG I F P
Sbjct: 1622 AVMQVHAKDADSSSNGLVTYEIVS------GP-QELFKLQRNTGIITFTP 1664
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92
V I I DVND PVF ++ AIME ++ V A D D+ R N + +L +
Sbjct: 2153 VTILIKDVNDEVPVFISANETAIMENVAINTV---VIAVKAVDNDEGR-NGYIDYLMKEA 2208
Query: 93 IDADNPGNSK---FDINRTTGEI 112
D D G S F +N T G++
Sbjct: 2209 RDED-MGQSDPLPFSLNPTDGQL 2230
>sp|Q5DRA2|PCDGM_PANTR Protocadherin gamma-C5 OS=Pan troglodytes GN=PCDHGC5 PE=3 SV=1
Length = 944
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 16 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLL-KV 71
Y + L+ASD+ + T+ ++I+DVND P FN LY A + E P P SLL V
Sbjct: 420 YIIELLASDAGSPSLHKHLTIRLNISDVNDNAPRFNQQLYTAYILENRP---PGSLLCTV 476
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
A+D D + Y + G + P +S +N G +F
Sbjct: 477 AASDPDTGDNARLTYSVVGNQVQG-APASSFVYVNPEDGRVF 517
>sp|Q9R0M0|CELR2_MOUSE Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculus
GN=Celsr2 PE=1 SV=2
Length = 2920
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 32 TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY-FLTG 90
T+ I + D ND PVF Y + E L Y +L V ATDGD NI+Y L G
Sbjct: 274 TLTILVTDTNDHDPVFEQQEYKESLRENLEVGY--EVLTVRATDGDAPPNANILYRLLEG 331
Query: 91 QGIDADNPGNSKFDINRTTGEI 112
G D+P ++ F+I+ +G I
Sbjct: 332 AG---DSPSDA-FEIDPRSGVI 349
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 16 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATD 75
Y L + ASD ++ +V+++ D N PVF +S Y E+ P +++ + ATD
Sbjct: 682 YVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNGNEDRPAGT--TVVLISATD 739
Query: 76 GDKDRQNNIVYFL 88
D I YF+
Sbjct: 740 EDTGENARITYFM 752
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 16 YELTLVASDS---LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y L + A D+ + T + I +NDVND P F Y + E++P P+ S+L++L
Sbjct: 782 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGTVYEDVP-PFT-SVLQIL 839
Query: 73 ATDGDKDRQNNIVY 86
ATD D + Y
Sbjct: 840 ATDRDSGLNGRVFY 853
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92
V + + D ND PPVF + +EE P ++ +V ATD D+ I+Y Q
Sbjct: 908 VTVTVLDGNDNPPVFEQDEFDVFVEEN--SPIGLAVARVTATDPDEGTNAQIMY----QI 961
Query: 93 IDADNPGNSKFDI 105
++ + P + DI
Sbjct: 962 VEGNIPEVFQLDI 974
>sp|Q5DRB8|PCDG2_PANTR Protocadherin gamma-A2 OS=Pan troglodytes GN=PCDHGA2 PE=3 SV=1
Length = 932
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 15 IYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKV 71
++ L LVASD + + + + + D ND PVF Y + E P +L V
Sbjct: 207 VHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIPENTP--VGTRILTV 264
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSK--FDINRTTGEI 112
ATD D+ +VYFL +PG + F++ T+GE+
Sbjct: 265 TATDADEGYYAQVVYFLE------KSPGETSEVFELKSTSGEL 301
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 15 IYELTLVASDSLNENKTT---VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKV 71
Y +TL A D N + +T +++ + D+ND P F+ + Y + E P S+ V
Sbjct: 417 FYNITLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPEN--NPRGASVFSV 474
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
A D D + ++ Y + P +S IN TG ++
Sbjct: 475 TAHDPDSNDNAHVTYSFVEDTVQG-APLSSYISINSDTGVLY 515
>sp|Q99PF4|CAD23_MOUSE Cadherin-23 OS=Mus musculus GN=Cdh23 PE=1 SV=2
Length = 3354
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 11/88 (12%)
Query: 16 YELTLVASDS-------LNENKTTVVIHINDVNDMPPVFNTSLYP-AIMEEELPGPYPHS 67
Y LT +A D+ EN VVI + DVND P F+ + ++ E E P S
Sbjct: 2471 YILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSVYENE---PAGTS 2527
Query: 68 LLKVLATDGDKDRQNNIVYFLTGQGIDA 95
++ +LATD D+ + + Y L G G++A
Sbjct: 2528 VITMLATDQDEGSNSQLTYSLEGPGMEA 2555
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 20/112 (17%)
Query: 14 LIYELTLVASDSLNE---NKTTVVIHINDVNDMPPVFNTSLY-PAIMEEELPGPYPHSLL 69
LIY LT++A D+ N + V I + D ND PP F+ Y +++E + G ++L
Sbjct: 636 LIY-LTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVLENIMAGA---TVL 691
Query: 70 KVLATDGDKDR---QNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118
+ ATD D+ R Q +I+Y L G+S+F IN +GEI L+
Sbjct: 692 FLNATDLDRSREYGQESIIYSL---------EGSSQFRINARSGEITTTSLL 734
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 16 YELTLVASDSLNENKT---TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y+L +VASD+ K+ T+ + + DVND P F ++Y + E++P + L
Sbjct: 961 YQLRVVASDAGTPTKSSTSTLTVRVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLN-- 1018
Query: 73 ATDGDKDRQNNIVYFLTGQGIDA 95
TD D + YF+T +D
Sbjct: 1019 CTDNDVGLNAELSYFITAGNVDG 1041
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 GTSNLPTLIYELTLVASDS--LNENKT---TVVIHINDVNDMPPVFNTSLYPAIMEEELP 61
G T Y L L A D+ + + +T TV + + DVND P+F S Y A + E++
Sbjct: 1057 GLDRETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDI- 1115
Query: 62 GPYPHSLLKVLATDGDKDRQNNIVY 86
P HS++++ ATD D+ + Y
Sbjct: 1116 -PEGHSIVQLKATDADEGEFGRVWY 1139
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 16 YELTLVASDSLNENKT-TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74
+ LT++A D E T V I++ DVND P F Y + E P L+++ AT
Sbjct: 529 FTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPS--VTQLVRLRAT 586
Query: 75 DGDKDRQNNIVY 86
D D N I Y
Sbjct: 587 DEDSPPNNLITY 598
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 28 ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY- 86
+ V++++ DVND PVF Y + E G S++ V ATD D + Y
Sbjct: 1189 RSSVRVIVYVEDVNDEAPVFTQQQYNRLGLRETAG-IGTSVIVVRATDKDTGDGGLVNYR 1247
Query: 87 FLTGQGIDADNPGNSKFDINRTTGEI 112
L+G KF+I+ +TG I
Sbjct: 1248 ILSG--------AEGKFEIDESTGLI 1265
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 33 VVIHINDVNDMPPVFNTSLYP-AIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQ 91
V + I D+ND P+F+ Y A+ E+ G +L+V ATD D I Y L
Sbjct: 2388 VYLEIVDINDNNPIFDQPSYQEAVFEDIAVGTV---ILRVTATDADSGNFALIEYSLVD- 2443
Query: 92 GIDADNPGNSKFDINRTTGEI 112
G KF IN TG+I
Sbjct: 2444 -------GEGKFAINPNTGDI 2457
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 16 YELTLVASDSL---NENKTTVVIHINDVNDMPPVFNTSL-YPAIMEEELPGPYPHSLLKV 71
Y L +VASD + + + I DVND PPV + Y + E + G S+++V
Sbjct: 1493 YILKVVASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGG--GTSVVQV 1550
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAP 116
ATD D + + Y++T D F ++R +GEI P
Sbjct: 1551 RATDRDIGINSVLSYYITEGNEDM------TFRMDRISGEIATRP 1589
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK--VLATDGDKDRQNNIVYFLTG 90
+++ + D ND P+F Y A + E P P ++L +LA D D+D + Y L G
Sbjct: 1945 LLVSLADENDNHPLFTEGTYQAEVMENSPAGTPLTVLNGPILALDADEDVYAVVTYQLLG 2004
Query: 91 QGID 94
D
Sbjct: 2005 THSD 2008
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 16 YELTLVASDSLNEN--KTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLA 73
Y+ L A++S+ ++ V I + + ND P+F+ LY + E + S+L VLA
Sbjct: 427 YDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVSLYENIT--VGTSVLTVLA 484
Query: 74 TDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFF 114
TD D + YF +D+P +F +++ TG I
Sbjct: 485 TDNDVGTFGEVNYFF------SDDP--DRFSLDKDTGLIML 517
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 17 ELTLVASDSLNENKTT-VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATD 75
EL L+A D N T + I I D ND P F+ Y + E P + S+L+V ATD
Sbjct: 2038 ELLLLAEDIGQLNGTAHLFITILDDNDNWPTFSPPTYTVHLLENCPPGF--SVLQVTATD 2095
Query: 76 GDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
D +VY + D +F I+ TG I
Sbjct: 2096 EDSGLNGELVYRIEAGAQD-------RFLIHPVTGVI 2125
>sp|Q5DRE7|PCDA5_PANTR Protocadherin alpha-5 OS=Pan troglodytes GN=PCDHA5 PE=3 SV=1
Length = 936
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 16 YELTLVASDSLNENKTTVV---IHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
+ L ++A+D T V I++ D ND P F+ S+Y + E P ++K+
Sbjct: 207 HRLLVIATDGGKPELTGTVQLLINVLDANDNAPEFDKSIYNVRLLEN--APSGTLVIKLN 264
Query: 73 ATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
A+D D+ IVYF + +D SKF IN TGEI
Sbjct: 265 ASDADEGINKEIVYFFSNLVLD---DVKSKFIINSNTGEI 301
>sp|P58365|CAD23_RAT Cadherin-23 OS=Rattus norvegicus GN=Cdh23 PE=2 SV=1
Length = 3317
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 16 YELTLVASDS-------LNENKTTVVIHINDVNDMPPVFNTSLYP-AIMEEELPGPYPHS 67
Y LT +A D+ EN VVI + DVND P F+ + ++ E E P S
Sbjct: 2469 YILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSVYENE---PAGTS 2525
Query: 68 LLKVLATDGDKDRQNNIVYFLTGQGIDA 95
++ +LATD D+ + Y L G G++A
Sbjct: 2526 VITMLATDQDEGSNGQLTYSLEGPGMEA 2553
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 16 YELTLVASDSLNENKT---TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
Y+L +VASD+ K+ T+ I + DVND P F ++Y + E++P + L
Sbjct: 959 YQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLN-- 1016
Query: 73 ATDGDKDRQNNIVYFLTGQGIDA 95
TD D + YF+T +D
Sbjct: 1017 CTDNDVGLNAELSYFITAGNVDG 1039
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 20/112 (17%)
Query: 14 LIYELTLVASDSLNE---NKTTVVIHINDVNDMPPVFNTSLY-PAIMEEELPGPYPHSLL 69
LIY LT++A D+ N + V I + D ND PP F+ Y +++E + G ++L
Sbjct: 634 LIY-LTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIMAGA---TVL 689
Query: 70 KVLATDGDKDR---QNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118
+ ATD D+ R Q +I+Y L G+S+F IN +GEI L+
Sbjct: 690 FLNATDLDRSREYGQESIIYSL---------EGSSQFRINARSGEITTTSLL 732
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 7 GTSNLPTLIYELTLVASDSLNENK-----TTVVIHINDVNDMPPVFNTSLYPAIMEEELP 61
G T Y L L A D++ K TV + + DVND P+F S Y A + E++
Sbjct: 1055 GLDRETTAAYTLVLEAIDNVPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDI- 1113
Query: 62 GPYPHSLLKVLATDGDKDRQNNIVY 86
P HS++++ ATD D+ + Y
Sbjct: 1114 -PEGHSIVQLKATDADEGEFGRVWY 1137
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 16 YELTLVASDSLNENKT-TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74
+ LT++A D E T V I++ DVND P F Y + E P L+++ AT
Sbjct: 527 FTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPS--VTQLVRLRAT 584
Query: 75 DGDKDRQNNIVY 86
D D N I Y
Sbjct: 585 DEDSPPNNLITY 596
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 28 ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVY- 86
+ V++++ DVND PVF Y + E G S++ V ATD D + Y
Sbjct: 1187 RSSVRVIVYVEDVNDEAPVFTQQQYNRLGLRETAG-IGTSVIVVRATDRDTGDGGLVNYR 1245
Query: 87 FLTGQGIDADNPGNSKFDINRTTGEI 112
L+G KF+I+ +TG I
Sbjct: 1246 ILSG--------AEGKFEIDESTGLI 1263
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 33 VVIHINDVNDMPPVFNT-SLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQ 91
V + I D+ND P+F+ S A+ E+ G +L+V ATD D I Y L
Sbjct: 2386 VYLEIVDINDNNPIFDQLSYQEAVFEDVAVGTV---ILRVTATDADSGNFALIEYSLVD- 2441
Query: 92 GIDADNPGNSKFDINRTTGEIF 113
G KF IN TG+I+
Sbjct: 2442 -------GEGKFAINPNTGDIY 2456
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 16 YELTLVASDSL---NENKTTVVIHINDVNDMPPVFNTSL-YPAIMEEELPGPYPHSLLKV 71
Y L +VASD + + + I DVND PPV + Y + E + G S+++V
Sbjct: 1491 YILKIVASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGG--GTSVVQV 1548
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAP 116
ATD D + + Y++T D F ++R +GEI P
Sbjct: 1549 RATDRDIGINSVLSYYITEGNEDM------TFRMDRISGEIATRP 1587
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 33 VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK--VLATDGDKDRQNNIVYFLTG 90
+++ + D ND P+F Y A + E P P ++L +LA D D+D + Y L G
Sbjct: 1943 LLVSLADENDNHPLFTEGTYQAEVMENSPAGTPLTVLNGPILALDADEDVYAVVTYQLLG 2002
Query: 91 QGID 94
D
Sbjct: 2003 THSD 2006
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 16 YELTLVASDSLNENK--TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLA 73
Y+ L A++S+ ++ V I + + ND P+F+ LY + E + S+L VLA
Sbjct: 425 YDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVSLYENIT--VGTSVLTVLA 482
Query: 74 TDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFF 114
TD D + YF +D+P +F +++ TG I
Sbjct: 483 TDNDVGTFGEVNYFF------SDDP--DRFSLDKDTGLIML 515
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 14/82 (17%)
Query: 13 TLIYELTLVASDSLNENKTT-------VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYP 65
T Y+LT+ A+D ++KT + I I DV DM P+F Y + E P P
Sbjct: 198 TQAYQLTVNATD---QDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHSP---P 251
Query: 66 HSLLKVL-ATDGDKDRQNNIVY 86
+ ++V+ A D DK R I Y
Sbjct: 252 GTTVRVITAVDQDKGRPRGIGY 273
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 17 ELTLVASDSLNENKTT-VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATD 75
EL L+A D N T + I I D ND P F+ Y + E P + S+L++ ATD
Sbjct: 2036 ELLLLAEDVGQLNGTAYLFITILDDNDNWPTFSPPAYTVHLLENCPPGF--SVLQITATD 2093
Query: 76 GDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
D +VY + D +F I+ TG I
Sbjct: 2094 EDSGLNGELVYRIEAGAQD-------RFLIHPVTGVI 2123
>sp|Q9Y5H1|PCDG2_HUMAN Protocadherin gamma-A2 OS=Homo sapiens GN=PCDHGA2 PE=2 SV=1
Length = 932
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 15 IYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYP-AIMEEELPGPYPHSLLK 70
++ L LVASD + + + + + D ND PVF Y +I E L G +L
Sbjct: 207 VHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIPENTLVGT---RILT 263
Query: 71 VLATDGDKDRQNNIVYFLTGQGIDADNPGNSK--FDINRTTGEI 112
V ATD D+ +VYFL +PG + F++ T+GE+
Sbjct: 264 VTATDADEGYYAQVVYFLE------KSPGETSEVFELKSTSGEL 301
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 15 IYELTLVASDSLNENKTT---VVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKV 71
Y +TL A D N + +T +++ + D+ND P F+ + Y + E P S+ V
Sbjct: 417 FYNITLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPEN--NPRGASVFSV 474
Query: 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIF 113
A D D + ++ Y + P +S IN TG ++
Sbjct: 475 TAHDPDSNDNAHVTYSFAEDTVQG-APLSSYISINSDTGVLY 515
>sp|Q9Y5G1|PCDGF_HUMAN Protocadherin gamma-B3 OS=Homo sapiens GN=PCDHGB3 PE=2 SV=3
Length = 929
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 16 YELTLVASDSLNENK---TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVL 72
+ L L A D ++ T + + + D ND PPVF +Y + E LP S+LKV+
Sbjct: 208 HHLVLTAVDGGEPSRSCTTQIRVIVADANDNPPVFTQDMYRVNVAENLPA--GSSVLKVM 265
Query: 73 ATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112
A D D+ I+Y G + F ++ TGE+
Sbjct: 266 AIDMDEGINAEIIYAFINIGKEV----RQLFKLDSKTGEL 301
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 16 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKV 71
Y +T+ A+D N + T+ +HI DVND PVF+ + Y + E PG S+ V
Sbjct: 418 YNVTITATDKGNPPLSSSKTITLHILDVNDNVPVFHQASYTVHVAENNPPGA---SIAHV 474
Query: 72 LATDGDKDRQNNIVYFLTGQGID 94
A+D D + Y++ ++
Sbjct: 475 RASDPDLGPNGLVSYYIVASDLE 497
>sp|Q9HC56|PCDH9_HUMAN Protocadherin-9 OS=Homo sapiens GN=PCDH9 PE=1 SV=2
Length = 1237
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 13 TLIYELTLVASDSLNE--NKTTVV-IHINDVNDMPPVFNTSLYP-AIMEEELPGPYPHSL 68
T + +VASDS N+T +V + + D ND PP+FN + ++ E G Y L
Sbjct: 432 TKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLY---L 488
Query: 69 LKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTG 110
+ ATD D + +IVY L P S FD++R TG
Sbjct: 489 TTISATDEDSGKNADIVYQL--------GPNASFFDLDRKTG 522
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 13 TLIYELTLVASD-SLNENKTTVVIHINDVNDMPP 45
T I+++T++ASD S + TV I++ DVND PP
Sbjct: 323 TAIHKVTVLASDGSSTPARATVTINVTDVNDNPP 356
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.138 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,315,961
Number of Sequences: 539616
Number of extensions: 2044622
Number of successful extensions: 5636
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 203
Number of HSP's that attempted gapping in prelim test: 4631
Number of HSP's gapped (non-prelim): 1144
length of query: 119
length of database: 191,569,459
effective HSP length: 86
effective length of query: 33
effective length of database: 145,162,483
effective search space: 4790361939
effective search space used: 4790361939
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 55 (25.8 bits)