Query psy14282
Match_columns 119
No_of_seqs 260 out of 1149
Neff 9.0
Searched_HMMs 29240
Date Fri Aug 16 15:54:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14282.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14282hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qrb_A Cadherin-1; cell adhesi 100.0 7.1E-30 2.4E-34 174.7 14.6 113 2-118 59-179 (213)
2 2qvi_A Cadherin-2; beta barrel 100.0 8.2E-30 2.8E-34 174.7 12.7 113 2-118 59-178 (215)
3 3mvs_A Cadherin-23, otocadheri 100.0 2E-29 6.8E-34 172.2 13.9 107 2-118 63-170 (210)
4 2a4e_A Cadherin-11; dimer, cal 100.0 4.1E-29 1.4E-33 171.3 15.0 107 2-118 57-172 (215)
5 3k5r_A Cadherin 13; mouse, str 100.0 1.6E-29 5.6E-34 173.4 12.7 110 2-115 59-174 (218)
6 3ppe_A Vascular endothelial ca 100.0 7.5E-29 2.6E-33 168.6 14.9 106 2-118 54-168 (203)
7 3lnd_A CDH6 protein, cadherin 100.0 6.3E-29 2.2E-33 169.3 9.6 107 2-118 56-171 (207)
8 2x2u_A Proto-oncogene tyrosine 99.9 3.1E-29 1.1E-33 174.9 2.3 108 2-118 66-201 (246)
9 3q2w_A Cadherin-2; cell adhesi 99.9 1.7E-26 5.6E-31 176.7 13.9 113 2-118 59-178 (559)
10 2a62_A Cadherin-8; extracellul 99.9 3.7E-27 1.3E-31 170.0 9.4 108 3-118 164-282 (322)
11 1l3w_A EP-cadherin, C-cadherin 99.9 8.7E-26 3E-30 172.3 15.0 113 2-118 65-185 (546)
12 2a62_A Cadherin-8; extracellul 99.9 9.8E-27 3.3E-31 167.8 8.8 107 2-118 56-171 (322)
13 3q2v_A Cadherin-1; cell adhesi 99.9 9.1E-26 3.1E-30 172.3 12.5 113 2-118 59-179 (550)
14 1q55_A EP-cadherin, C-cadherin 99.9 3.5E-25 1.2E-29 176.5 15.0 113 2-118 214-334 (880)
15 3ubf_A Neural-cadherin; cell a 99.9 2.4E-25 8.2E-30 160.0 12.5 107 2-118 51-169 (316)
16 3ubf_A Neural-cadherin; cell a 99.9 1.3E-24 4.6E-29 156.1 14.1 105 2-118 162-275 (316)
17 3ubh_A Neural-cadherin; cell a 99.9 1.2E-24 4.2E-29 161.4 13.4 104 2-118 273-383 (419)
18 4apx_B Protocadherin-15, otoca 99.9 1.9E-25 6.6E-30 155.5 7.6 109 6-118 80-200 (242)
19 3q2v_A Cadherin-1; cell adhesi 99.9 1.1E-23 3.7E-28 160.9 15.2 107 2-118 281-394 (550)
20 3ubh_A Neural-cadherin; cell a 99.9 8.1E-24 2.8E-28 157.0 14.0 107 2-118 56-174 (419)
21 3q2w_A Cadherin-2; cell adhesi 99.9 2.5E-23 8.7E-28 159.1 13.8 107 2-118 284-400 (559)
22 1l3w_A EP-cadherin, C-cadherin 99.9 1.1E-23 3.7E-28 160.8 11.5 107 2-118 287-400 (546)
23 1q55_A EP-cadherin, C-cadherin 99.9 7.4E-23 2.5E-27 163.2 11.5 107 2-118 436-549 (880)
24 2ee0_A Protocadherin-9; Ca dom 99.9 4.2E-24 1.4E-28 133.3 2.3 79 35-118 2-80 (114)
25 2yst_A Protocadherin-7; BH-PCD 99.9 2.3E-23 7.7E-28 130.8 3.0 78 35-118 2-79 (119)
26 2yqg_A Desmoglein-2, HDGC; cad 99.6 4.6E-15 1.6E-19 93.3 6.3 49 2-50 71-123 (123)
27 1ncg_A N-cadherin; cell adhesi 99.6 7.6E-15 2.6E-19 90.6 6.2 46 2-47 61-110 (110)
28 1zvn_A Mn-cadherin; strand dim 99.4 1.7E-13 5.7E-18 83.2 6.0 59 52-118 6-64 (99)
29 1zxk_A Cadherin-8; strand dime 99.4 1.9E-13 6.4E-18 82.8 5.7 59 52-118 5-63 (98)
30 3mvs_A Cadherin-23, otocadheri 99.4 1.3E-13 4.3E-18 93.8 4.5 67 41-118 2-70 (210)
31 1wyj_A Protocadherin beta 14; 99.4 8.3E-14 2.8E-18 87.8 2.2 55 2-56 65-124 (125)
32 2yst_A Protocadherin-7; BH-PCD 99.4 1.3E-12 4.3E-17 81.5 6.7 44 2-45 72-119 (119)
33 2yqg_A Desmoglein-2, HDGC; cad 99.4 5E-14 1.7E-18 88.5 0.2 74 40-118 5-78 (123)
34 3k6d_A T-cadherin; cell adhesi 99.2 1E-11 3.6E-16 75.1 5.2 59 52-118 5-65 (99)
35 2x2u_A Proto-oncogene tyrosine 99.2 1.1E-11 3.7E-16 86.2 4.0 64 46-118 2-73 (246)
36 3k6f_A T-cadherin; cell adhesi 99.2 4.5E-11 1.5E-15 72.4 5.8 59 52-118 6-66 (100)
37 3k6i_A T-cadherin; cell adhesi 99.2 8.5E-11 2.9E-15 71.0 6.2 58 53-118 6-65 (99)
38 2a4e_A Cadherin-11; dimer, cal 99.1 1.1E-10 3.8E-15 79.6 6.4 45 2-46 164-215 (215)
39 1ncg_A N-cadherin; cell adhesi 99.1 1.1E-10 3.8E-15 71.8 5.5 61 51-118 6-68 (110)
40 1wyj_A Protocadherin beta 14; 99.1 2.4E-11 8.3E-16 76.4 2.1 60 49-118 10-72 (125)
41 2omz_B Epithelial-cadherin; le 99.1 1.2E-10 4.1E-15 71.1 5.2 62 52-118 9-70 (105)
42 1wuz_A Pcdha4 protein, CNR-EC1 99.0 1.2E-11 4.2E-16 75.3 -2.1 60 50-118 3-64 (103)
43 2ee0_A Protocadherin-9; Ca dom 98.9 2.8E-09 9.7E-14 65.8 6.8 40 2-41 73-114 (114)
44 2omz_B Epithelial-cadherin; le 98.9 3E-09 1E-13 64.8 6.5 39 2-40 63-105 (105)
45 2qvi_A Cadherin-2; beta barrel 98.9 3.1E-09 1.1E-13 72.3 6.4 61 53-118 6-66 (215)
46 3lnd_A CDH6 protein, cadherin 98.9 7.7E-10 2.6E-14 74.8 2.9 59 52-118 5-63 (207)
47 3k6f_A T-cadherin; cell adhesi 98.8 1.1E-08 3.7E-13 61.8 6.6 38 2-39 59-100 (100)
48 3k6i_A T-cadherin; cell adhesi 98.8 1.3E-08 4.6E-13 61.2 6.7 38 2-39 58-99 (99)
49 3k6d_A T-cadherin; cell adhesi 98.8 1.3E-08 4.6E-13 61.3 6.6 38 2-39 58-99 (99)
50 1zvn_A Mn-cadherin; strand dim 98.8 1.5E-08 5.3E-13 61.1 6.7 38 2-39 57-99 (99)
51 1zxk_A Cadherin-8; strand dime 98.8 1.9E-08 6.6E-13 60.5 6.4 38 2-39 56-98 (98)
52 3qrb_A Cadherin-1; cell adhesi 98.8 1.1E-08 3.6E-13 69.4 5.6 61 53-118 6-66 (213)
53 3ppe_A Vascular endothelial ca 98.6 5.2E-08 1.8E-12 65.6 6.1 55 52-118 5-61 (203)
54 3k5r_A Cadherin 13; mouse, str 98.6 7.3E-08 2.5E-12 65.5 4.8 59 52-118 6-66 (218)
55 1wuz_A Pcdha4 protein, CNR-EC1 98.3 6.2E-07 2.1E-11 54.3 4.3 40 2-43 57-103 (103)
56 4apx_B Protocadherin-15, otoca 98.0 7.7E-06 2.6E-10 56.5 5.6 57 50-115 20-77 (242)
57 3rb5_A Na/Ca exchange protein; 93.3 1.5 5E-05 31.0 10.6 76 11-92 87-165 (298)
58 1op4_A Neural-cadherin; beta s 89.9 0.32 1.1E-05 31.4 3.4 64 41-118 30-93 (159)
59 2yrl_A KIAA1837 protein; PKD d 85.7 2.4 8.3E-05 24.8 5.4 29 14-42 69-98 (102)
60 2kpn_A Bacillolysin; solution 84.3 3.9 0.00013 24.2 5.8 43 3-45 47-91 (103)
61 3pdd_A Glycoside hydrolase, fa 78.0 12 0.0004 24.3 7.7 67 14-89 61-132 (190)
62 2y72_A Collagenase, collagenas 72.6 10 0.00035 21.1 5.0 28 11-38 55-84 (85)
63 3pe9_A Fibronectin(III)-like m 72.3 8.8 0.0003 22.3 4.7 26 14-39 61-88 (98)
64 3gin_A Sodium/calcium exchange 70.2 9.8 0.00033 24.2 4.9 57 31-92 10-66 (160)
65 3ead_A Na/Ca exchange protein; 58.0 16 0.00054 22.4 4.1 11 68-78 106-116 (137)
66 3pdd_A Glycoside hydrolase, fa 44.9 40 0.0014 21.7 4.6 26 14-39 153-180 (190)
67 1b4r_A Protein (PKD1_human); P 44.5 40 0.0014 18.7 4.0 24 14-37 55-78 (80)
68 1wgo_A VPS10 domain-containing 44.1 27 0.00091 21.3 3.3 28 11-38 90-118 (123)
69 2lv4_A Putative outer membrane 43.7 13 0.00044 22.9 1.9 27 18-44 50-79 (146)
70 3us9_A Sodium/calcium exchange 43.3 81 0.0028 22.0 10.8 56 31-92 128-183 (295)
71 3kvp_A Uncharacterized protein 37.1 25 0.00087 19.2 2.2 19 100-118 40-58 (72)
72 2kzw_A Uncharacterized protein 27.9 1.1E+02 0.0038 18.9 5.1 30 11-40 110-140 (145)
73 1row_A SSP-19, MSP-domain prot 26.2 81 0.0028 18.5 3.4 24 82-112 29-52 (109)
74 2c4x_A Endoglucanase, ctcel9D- 24.8 1.4E+02 0.0049 20.3 4.9 66 10-77 64-146 (260)
75 2qvk_A CBD2, sodium/calcium ex 23.8 1.6E+02 0.0054 19.3 6.0 47 41-92 2-48 (192)
76 1m1s_A WR4; structural genomic 23.0 1.1E+02 0.0036 18.3 3.5 24 82-112 37-60 (116)
77 2e7m_A Protein KIAA0319; PKD d 20.3 47 0.0016 20.0 1.5 24 15-38 81-104 (113)
No 1
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.97 E-value=7.1e-30 Score=174.68 Aligned_cols=113 Identities=28% Similarity=0.336 Sum_probs=100.9
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCC---ceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEECC
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNE---NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGD 77 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~---~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~D 77 (119)
.|++.++||||. ..|.|+|.|+|++.+ +++.|.|+|.|+|||+|+|.+..|.+.|+|+. ++|+.|++|.|+|+|
T Consensus 59 ~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~--~~gt~v~~v~A~D~D 136 (213)
T 3qrb_A 59 WLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGA--VPGTSVMKVSATDAD 136 (213)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTC--CTTCEEEECCEECCS
T ss_pred EEEECCccCcccCceEEEEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCC--CCCcEEEEEEEEeCC
Confidence 478899999999 999999999998865 67999999999999999999999999999996 999999999999999
Q ss_pred CC---CCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEc-ccc
Q psy14282 78 KD---RQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA-PLI 118 (119)
Q Consensus 78 ~~---~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~-~~L 118 (119)
.+ .|+.++|+|.++. +..+...+|.|++.||.|+++ +.|
T Consensus 137 ~~~~~~n~~i~Y~i~~~~--~~~~~~~~F~Id~~tG~i~~~~~~L 179 (213)
T 3qrb_A 137 DDVNTYNAAIAYTIVSQD--PELPHKNMFTVNRDTGVISVLTSGL 179 (213)
T ss_dssp CTTTSSTTCCEEEEEEEE--SCCSCSCSEEECTTTCEEEECSSCC
T ss_pred CCCCCcCcEEEEEEccCC--CCCCcCCeEEEECCCcEEEEccCCC
Confidence 98 8999999998765 222245799999999999986 544
No 2
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.97 E-value=8.2e-30 Score=174.74 Aligned_cols=113 Identities=23% Similarity=0.286 Sum_probs=100.8
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCC---ceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEECC
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNE---NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGD 77 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~---~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~D 77 (119)
.|++.++||||. +.|.|+|.|+|+|.+ +++.|.|+|.|+|||+|+|.+..|.+.|+|+. ++|+.|++|.|+|+|
T Consensus 59 ~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~--~~gt~v~~v~A~D~D 136 (215)
T 2qvi_A 59 QLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGS--KPGTYVMTVTAIDAD 136 (215)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSC--CTTCEEEECCCBCSS
T ss_pred EEEECcccCcccCCeEEEEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCC--CCCCEEEEEEEEeCC
Confidence 478899999999 999999999999876 67899999999999999999999999999996 899999999999999
Q ss_pred C--CCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEc-ccc
Q psy14282 78 K--DRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA-PLI 118 (119)
Q Consensus 78 ~--~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~-~~L 118 (119)
. |.|+.++|+|.+++ +..+..+.|.|++.||.|++. ++|
T Consensus 137 ~~~g~n~~i~Y~i~~~~--~~~~~~~~F~Id~~tG~i~~~~~~L 178 (215)
T 2qvi_A 137 DPNALNGMLRYRILSQA--PSTPSPNMFTINNETGDIITVAAGL 178 (215)
T ss_dssp CTTSTTTCCCCEEEECS--SCCSSTTCEEECTTTCEEEECSCCC
T ss_pred CCCCCCcEEEEEEecCC--CCCCcCCeEEEcCCCcEEEEecCCC
Confidence 8 68999999999875 122246899999999999985 554
No 3
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.97 E-value=2e-29 Score=172.17 Aligned_cols=107 Identities=21% Similarity=0.310 Sum_probs=100.6
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCCceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEECCCCC
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDR 80 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~D~~~ 80 (119)
.|++.++||||. ..|.|+|.|+|++++.++.|.|+|.|+|||+|+|.+..|.+.|+|+. ++|+.|+++.|+|+|.|.
T Consensus 63 ~i~~~~~LD~E~~~~y~l~v~a~D~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~--~~gt~v~~v~A~D~D~g~ 140 (210)
T 3mvs_A 63 VVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPTFHNQPYSVRIPENT--PVGTPIFIVNATDPDLGA 140 (210)
T ss_dssp EEEESSCCCTTTCCEEEEEEEEECSSCEEEEEEEEEEECCCCCCCEECSCSEEEEEETTC--CTTCEEEECCEECCSSGG
T ss_pred EEEECCccCCcccceEEEEEEEEeCCCCEEEEEEEEEEeCCCCCCcCCCceEEEEEECCC--CCCCEEEEEEEEeCCCCC
Confidence 478899999999 99999999999988888999999999999999999999999999996 999999999999999999
Q ss_pred CCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 81 QNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 81 ~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
|+.++|+|..+ .++|.|++.+|.|++.++|
T Consensus 141 n~~v~Y~i~~~--------~~~F~Id~~tG~i~~~~~L 170 (210)
T 3mvs_A 141 GGSVLYSFQPP--------SPFFAIDSARGIVTVIQEL 170 (210)
T ss_dssp GGCEEEEESSC--------CSSEEECTTTCEEEECSCC
T ss_pred CceEEEEEeCC--------CCCEEEeCCcEEEEECCcC
Confidence 99999999763 4799999999999998876
No 4
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.96 E-value=4.1e-29 Score=171.32 Aligned_cols=107 Identities=25% Similarity=0.371 Sum_probs=97.8
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCC-C---ceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEEC
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLN-E---NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDG 76 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~-~---~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~ 76 (119)
.|++.++||||. +.|.|+|.|+|++. + +.+.|.|+|.|+|||+|+|.+..|.+.|+|+. ++|+.|++|.|+|+
T Consensus 57 ~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~--~~Gt~v~~v~A~D~ 134 (215)
T 2a4e_A 57 NIHATKTLDREERAQYTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERS--NVGTSVIQVTASDA 134 (215)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTC--CTTCEEEECCEECS
T ss_pred EEEECCccCCccCCEEEEEEEEEECCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCC--CCCCEEEEEEEEEC
Confidence 478899999999 99999999999874 2 57899999999999999999999999999996 99999999999999
Q ss_pred CC---CCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEc-ccc
Q psy14282 77 DK---DRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA-PLI 118 (119)
Q Consensus 77 D~---~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~-~~L 118 (119)
|. |.|+.++|+|.++ ..+|.|++.||.|+++ ++|
T Consensus 135 D~~~~G~n~~i~Y~i~~~--------~~~F~Id~~tG~I~~~~~~L 172 (215)
T 2a4e_A 135 DDPTYGNSAKLVYSILEG--------QPYFSVEAQTGIIRTALPNM 172 (215)
T ss_dssp SCTTTCSSSCCEEEEEES--------TTTEEECTTTCEEEECSSCC
T ss_pred CCCCCCCceEEEEEEeCC--------CCcEEEeCCccEEEEcccCC
Confidence 97 7889999999985 3689999999999998 655
No 5
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.96 E-value=1.6e-29 Score=173.41 Aligned_cols=110 Identities=22% Similarity=0.325 Sum_probs=98.6
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCC---ceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEECC
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNE---NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGD 77 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~---~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~D 77 (119)
.|++.++||||. +.|.|+|.|+|+|.+ +++.|.|+|.|+|||+|+|.+..|.+.|+|+. ++|+.|++|.|+|+|
T Consensus 59 ~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~--~~gt~v~~v~A~D~D 136 (218)
T 3k5r_A 59 SVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGS--PTGTTVMRMTAFDAD 136 (218)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTC--CTTCEEEECCCSCSS
T ss_pred EEEECCcCCcccCCEEEEEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCC--CCCCEEEEEEEEeCC
Confidence 478899999999 999999999999876 67899999999999999999999999999996 999999999999999
Q ss_pred C--CCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEc
Q psy14282 78 K--DRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA 115 (119)
Q Consensus 78 ~--~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~ 115 (119)
. |.|+.++|+|.++.. ..+..++|.|++.||.|++.
T Consensus 137 ~~~g~n~~i~Y~i~~~~~--~~~~~~~F~Id~~tG~i~~~ 174 (218)
T 3k5r_A 137 DPATDNALLRYNIRQQTP--DKPSPNMFYIDPEKGDIVTV 174 (218)
T ss_dssp SSCGGGGCEEEEEEEEES--CCSCSCSEEECTTTCEEEEC
T ss_pred CCCCCCcEEEEEEecCCC--CCCcCCEEEEECCccEEEEe
Confidence 9 679999999998651 11224789999999999976
No 6
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.96 E-value=7.5e-29 Score=168.63 Aligned_cols=106 Identities=25% Similarity=0.373 Sum_probs=97.3
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCC----ceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEEC
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNE----NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDG 76 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~----~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~ 76 (119)
.|++.++||||. +.|.|+|.|+|+|.+ +++.|.|+|.|+|||+|+|.+..|.+.|+|+. ++|+.|++|.|+|+
T Consensus 54 ~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~--~~gt~v~~v~A~D~ 131 (203)
T 3ppe_A 54 DIYAFERLDREKKAEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMS--RLGTSVTKVTAEDA 131 (203)
T ss_dssp EEEESSCCCTTTCCEEEEEEEEEETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTC--CTTCEEEECCEECC
T ss_pred EEEECccccccccceEEEEEEEEECCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccC--CCCcEEEEEEEEcC
Confidence 478899999999 999999999999864 67899999999999999999999999999996 99999999999999
Q ss_pred C---CCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEc-ccc
Q psy14282 77 D---KDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA-PLI 118 (119)
Q Consensus 77 D---~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~-~~L 118 (119)
| .|.|+.++|+|.+++ .+|.|+ .+|.|+++ ++|
T Consensus 132 D~~~~g~n~~i~Y~i~~~~--------~~F~I~-~tG~i~~~~~~L 168 (203)
T 3ppe_A 132 DDPTVAGHATVTYQIIKGN--------EYFTVD-DSGVIFTARADL 168 (203)
T ss_dssp SCTTSSSTTCEEEEEEEST--------TTEEEC-TTSEEEESCSCC
T ss_pred CCcCCCCceEEEEEEeCCC--------CcEEEe-CCeEEEECCcCC
Confidence 9 478999999999853 589999 99999998 665
No 7
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.96 E-value=6.3e-29 Score=169.34 Aligned_cols=107 Identities=23% Similarity=0.336 Sum_probs=93.6
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCC-C---ceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEEC
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLN-E---NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDG 76 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~-~---~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~ 76 (119)
.|++.++||||. +.|.|+|.|+|++. + +++.|.|+|.|+|||+|+|.+..|.+.|+|+. ++|+.|++|.|+|+
T Consensus 56 ~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~--~~gt~v~~v~A~D~ 133 (207)
T 3lnd_A 56 DIQATKRLDREEKPVYILRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMA--DVGTFVVQVTATDA 133 (207)
T ss_dssp EEEECSCCCGGGCCEEEC----CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSC--CTTCEEEECCEECS
T ss_pred EEEECCCcCcccCCEEEEEEEEEECCCCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCC--CCCCEEEEEEEEeC
Confidence 478899999999 99999999999863 2 67889999999999999999999999999996 99999999999999
Q ss_pred CC---CCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEc-ccc
Q psy14282 77 DK---DRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA-PLI 118 (119)
Q Consensus 77 D~---~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~-~~L 118 (119)
|. |.|+.++|+|.+++ .+|.|++.+|.|+++ ++|
T Consensus 134 D~~~~g~n~~i~Y~i~~~~--------~~F~Id~~tG~i~~~~~~l 171 (207)
T 3lnd_A 134 DDPTYGNSAKVVYSILQGQ--------PYFSVESETGIIKTALLNM 171 (207)
T ss_dssp SCTTSSSTTCCEEEEEESG--------GGEEECTTTCEEEECCSSC
T ss_pred CCCCCCCCcEEEEEEcCCC--------CCEEEcCCCcEEEECcccC
Confidence 98 78899999999853 599999999999988 654
No 8
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.95 E-value=3.1e-29 Score=174.93 Aligned_cols=108 Identities=14% Similarity=-0.033 Sum_probs=96.5
Q ss_pred EEEcCCCCCCCC-ceE------------EEEEEEEeCCCC-----ceEEEEEEEeeCCCCCCe----------ecCCCcc
Q psy14282 2 ALYPPGTSNLPT-LIY------------ELTLVASDSLNE-----NKTTVVIHINDVNDMPPV----------FNTSLYP 53 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y------------~l~v~a~D~~~~-----~~~~v~I~V~DvNDn~P~----------f~~~~y~ 53 (119)
.|++.++||||. +.| .|+|.|+|+|.+ +++.|.|+|.|+|||+|+ |.+..|.
T Consensus 66 ~i~~~~~LDrE~~~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~ 145 (246)
T 2x2u_A 66 LLYLQRSLDHSSWEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPS 145 (246)
T ss_dssp EEEESSCBCHHHHHHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCC
T ss_pred EEEECCcCChhHhhhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEE
Confidence 478899999999 999 999999999864 578999999999999999 9999999
Q ss_pred EEEeCCCCCCCCcEEEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 54 AIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 54 ~~v~E~~~~~~g~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
+.|+|+. ++|+.|++|.|+|+|.|.|+.++|+|.+++ ..+|.|++.||.|++.++|
T Consensus 146 ~~v~En~--~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~-------~~~F~Id~~tG~i~~~~~L 201 (246)
T 2x2u_A 146 FRIRENR--PPGTFHQFRLLPVQFLCPQISVAYRLLEGE-------GLPFRSAPDSLEVSTRWAL 201 (246)
T ss_dssp EEEEBTS--CCCEEEECSCHHHHHHCTTSCEEEEEESCT-------TSSEECCTTCCEEEESSCB
T ss_pred EEEECCC--CCCcEEEEEEEEcCCCCCCcEEEEEEccCC-------CCCEEEECCcCEEEeCCcc
Confidence 9999997 999999999999999999999999999863 5789999999999999876
No 9
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.94 E-value=1.7e-26 Score=176.68 Aligned_cols=113 Identities=23% Similarity=0.285 Sum_probs=100.0
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCC---ceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEECC
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNE---NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGD 77 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~---~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~D 77 (119)
.|++.++||||+ ..|.|++.|+|+|++ +++.|.|+|.|+|||+|+|.+..|.++|+|+. ++|+.|+++.|+|+|
T Consensus 59 ~l~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~--~~Gt~v~~v~A~D~D 136 (559)
T 3q2w_A 59 QLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGS--KPGTYVMTVTAIDAD 136 (559)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTSCEEEEEEEEEEEEECCCCCCCEESCSEEEEEEETTC--CTTCEEEECCEECSS
T ss_pred EEEECCccCCCCCceEEEEEEEEECCCCccceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCC--CCCcEEEEEEEEcCC
Confidence 478899999999 999999999999876 57899999999999999999999999999996 999999999999999
Q ss_pred CC--CCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcc-cc
Q psy14282 78 KD--RQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAP-LI 118 (119)
Q Consensus 78 ~~--~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~-~L 118 (119)
.| .|+.++|+|.++. +..+..++|.|++.||.|++.+ .|
T Consensus 137 ~g~~~n~~v~Ysi~~~~--~~~~~~~~F~Id~~tG~i~~~~~~L 178 (559)
T 3q2w_A 137 DPNALNGMLRYRILSQA--PSTPSPNMFTINNETGDIITVAAGL 178 (559)
T ss_dssp CTTSGGGCCEEEEEEEE--SCCSCTTCEEECTTTCEEEECCSCC
T ss_pred CCCCCceEEEEEEecCC--CCCCCcceEEEeCCceEEEEEeccC
Confidence 87 6899999998764 1122237899999999999876 54
No 10
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.94 E-value=3.7e-27 Score=169.98 Aligned_cols=108 Identities=24% Similarity=0.336 Sum_probs=96.4
Q ss_pred EEcC-CCCCCCC-ceEEEEEEEEeCCCC-----ceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEE
Q psy14282 3 LYPP-GTSNLPT-LIYELTLVASDSLNE-----NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATD 75 (119)
Q Consensus 3 l~~~-~~LDrE~-~~y~l~v~a~D~~~~-----~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D 75 (119)
|++. +.||||. ..|.|+|.|+|+|.+ +++.|+|+|.|+|||+|+|.+..|.+.|+|+. ++|+.|++|.|+|
T Consensus 164 i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~--~~gt~v~~v~A~D 241 (322)
T 2a62_A 164 IKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDV--VLGTAIGRVKAND 241 (322)
T ss_dssp EEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCC--SSCCEEEEEECCC
T ss_pred EEecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCC--CCCcEEEEEEEEe
Confidence 5666 8999999 999999999998754 68999999999999999999999999999996 8999999999999
Q ss_pred CCCCCCCeEEEEEecCCcCCCCCCCCcEEEe----CCCceEEEcccc
Q psy14282 76 GDKDRQNNIVYFLTGQGIDADNPGNSKFDIN----RTTGEIFFAPLI 118 (119)
Q Consensus 76 ~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~----~~tG~i~~~~~L 118 (119)
+|.|.|+.++|+|..++ ..+.|.|+ +.+|.|+++++|
T Consensus 242 ~D~g~n~~i~Y~i~~g~------~~~~F~I~~d~~~~tG~i~~~~~L 282 (322)
T 2a62_A 242 QDIGENAQSSYDIIDGD------GTALFEITSDAQAQDGVIRLRKPL 282 (322)
T ss_dssp SSCGGGTCCEEEEC---------CCSSBCCBCCTTTSEEEEEBCSCC
T ss_pred CCCCCCceEEEEEECCC------CCCcEEEeccCCCceEEEEECCcC
Confidence 99999999999998765 46899998 458999998876
No 11
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.94 E-value=8.7e-26 Score=172.31 Aligned_cols=113 Identities=22% Similarity=0.275 Sum_probs=100.0
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCC---ceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEECC
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNE---NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGD 77 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~---~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~D 77 (119)
.|++.++||||+ ..|.|+|.|+|+|++ +++.|.|+|.|+|||+|+|.+..|.++|+|+. ++|+.|+++.|+|+|
T Consensus 65 ~l~~~~~LDrE~~~~y~l~v~A~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~--~~gt~v~~v~A~D~D 142 (546)
T 1l3w_A 65 WMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGV--QPGTQVMAVSATDED 142 (546)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTC--CSSEEEEECCEECCS
T ss_pred EEEECCcCCcccCceEEEEEEEEeCCCCcccceEEEEEEEEecccCcCEecCceeEEEEECCC--CCCCEEEEEEEEcCC
Confidence 478899999999 999999999999865 57899999999999999999999999999996 999999999999999
Q ss_pred CC---CCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEc-ccc
Q psy14282 78 KD---RQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA-PLI 118 (119)
Q Consensus 78 ~~---~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~-~~L 118 (119)
.| .|+.++|+|.++. +..+..++|.|++.||.|++. +.|
T Consensus 143 ~g~~~~n~~v~Ysi~~~~--~~~~~~~~F~Id~~tG~i~~~~~~L 185 (546)
T 1l3w_A 143 DNIDSLNGVLSYSILKQD--PEEPIPNLFTINRETGVISLIGTGL 185 (546)
T ss_dssp CCSSSSTTCCEEEEEEES--SCCSCSCSEEECTTTCEEEECSCCC
T ss_pred CCCCCCCCEEEEEEeCCC--CCcccCCcEEEeCCCceEEEeccCC
Confidence 98 6899999999864 112235799999999999985 444
No 12
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.94 E-value=9.8e-27 Score=167.79 Aligned_cols=107 Identities=26% Similarity=0.290 Sum_probs=97.0
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCC--C--ceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEEC
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLN--E--NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDG 76 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~--~--~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~ 76 (119)
.|++.++||||. ..|.|+|.|+|++. + +.+.|.|+|.|+|||+|+|.+..|.+.|+|+. ++|+.|+++.|+|+
T Consensus 56 ~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~--~~gt~v~~v~A~D~ 133 (322)
T 2a62_A 56 DIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMS--ILGTSVTNVTATDA 133 (322)
T ss_dssp EEEECSCCCTTTCSBCCEEEEEECTTTCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSC--CTTCBCCCCCCCBC
T ss_pred EEEEeccCCcccccEEEEEEEEEECCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCC--CCCCEEEEEEEEeC
Confidence 478899999999 99999999999864 2 57889999999999999999999999999996 99999999999999
Q ss_pred CC---CCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEc-ccc
Q psy14282 77 DK---DRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA-PLI 118 (119)
Q Consensus 77 D~---~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~-~~L 118 (119)
|. |.|+.++|+|.++ .++|.|++.+|.|+++ +.|
T Consensus 134 D~~~~G~n~~i~Y~i~~~--------~~~F~Id~~tG~i~~~~~~L 171 (322)
T 2a62_A 134 DDPVYGNSAKLVYSILEG--------QPYFSIEPETAIIKTALPNM 171 (322)
T ss_dssp SCSSSTTSSCEEEEEEEC--------TTTEEECTTTCCEEECSSCC
T ss_pred CCCCCCccEEEEEEEccC--------CCCEEEecCCCEEEecccCC
Confidence 96 7789999999975 3689999999999987 554
No 13
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.93 E-value=9.1e-26 Score=172.30 Aligned_cols=113 Identities=28% Similarity=0.336 Sum_probs=100.1
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCC---ceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEECC
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNE---NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGD 77 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~---~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~D 77 (119)
.|++.++||||+ ..|.|++.|+|++++ +++.|.|+|.|+|||+|+|.+..|.++|+|+. ++|+.++++.|+|+|
T Consensus 59 ~l~~~~~LDrE~~~~y~l~v~a~d~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~--~~Gt~v~~v~A~D~D 136 (550)
T 3q2v_A 59 WLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGA--VPGTSVMKVSATDAD 136 (550)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTC--CTTCEEEECCBCCCS
T ss_pred EEEECCccCcccCCeeEEEEEEEeCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCC--CCCCEEEEEEEEeCC
Confidence 478899999999 999999999998764 67899999999999999999999999999996 999999999999999
Q ss_pred CC---CCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEc-ccc
Q psy14282 78 KD---RQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA-PLI 118 (119)
Q Consensus 78 ~~---~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~-~~L 118 (119)
.| .|+.++|+|.++. +..+..++|.|++.||.|++. +.|
T Consensus 137 ~g~~~~N~~i~Ysi~~~~--~~~~~~~~F~id~~tG~i~~~~~~L 179 (550)
T 3q2v_A 137 DDVNTYNAAIAYTIVSQD--PELPHKNMFTVNRDTGVISVLTSGL 179 (550)
T ss_dssp CTTTCGGGCCEEEEEEEE--SCCSSSCSEEECTTTCEEEECSSCC
T ss_pred CCCCCcceEEEEEEecCC--CCCCcCCceEEcCCCeEEEEccCCC
Confidence 98 7899999999865 222346799999999999874 444
No 14
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.93 E-value=3.5e-25 Score=176.49 Aligned_cols=113 Identities=22% Similarity=0.275 Sum_probs=100.1
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCC---ceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEECC
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNE---NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGD 77 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~---~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~D 77 (119)
.|++.++||||+ ..|.|+|.|+|++++ +++.|.|+|.|+|||+|+|.+..|.++|+|+. ++|+.|++|.|+|+|
T Consensus 214 ~l~~~~~LDrE~~~~y~l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~--~~Gt~V~~v~AtD~D 291 (880)
T 1q55_A 214 WMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGV--QPGTQVMAVSATDED 291 (880)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTC--CSSEEEEECCEECCS
T ss_pred EEEECCccCccccCccEEEEEEEECCCCceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCC--CCCceeEEEEEEcCC
Confidence 478899999999 999999999999765 67899999999999999999999999999996 899999999999999
Q ss_pred CC---CCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEc-ccc
Q psy14282 78 KD---RQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA-PLI 118 (119)
Q Consensus 78 ~~---~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~-~~L 118 (119)
.| .|+.++|+|.++. +..+..++|.|++.||.|++. +.|
T Consensus 292 ~g~~~~N~~v~Ysi~~~~--~~~~~~~~F~Id~~tG~I~~~~~~L 334 (880)
T 1q55_A 292 DNIDSLNGVLSYSILKQD--PEEPIPNLFTINRETGVISLIGTGL 334 (880)
T ss_dssp CCSSSSTTCCEEEEEEES--SCCSCSCSEEECTTTCEEEECSCCC
T ss_pred CCCCCcCcEEEEEEcCCC--CCcccCCeEEEccCCccEEEecccC
Confidence 98 6899999999864 112245799999999999985 444
No 15
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.93 E-value=2.4e-25 Score=159.97 Aligned_cols=107 Identities=20% Similarity=0.301 Sum_probs=90.8
Q ss_pred EEEcCCCCCCCC-c-----eEEEEEEEEeCCCC----ceEEEEEEEeeCCCCCCeecCCC--ccEEEeCCCCCCCCcEEE
Q psy14282 2 ALYPPGTSNLPT-L-----IYELTLVASDSLNE----NKTTVVIHINDVNDMPPVFNTSL--YPAIMEEELPGPYPHSLL 69 (119)
Q Consensus 2 ~l~~~~~LDrE~-~-----~y~l~v~a~D~~~~----~~~~v~I~V~DvNDn~P~f~~~~--y~~~v~E~~~~~~g~~v~ 69 (119)
.|++.++||||. . .|.|++.|.|++.+ +++.|.|+|.|+|||+|+|.+.. |.+.|+|+. ++|+.|+
T Consensus 51 ~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~--~~gt~v~ 128 (316)
T 3ubf_A 51 AVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNA--PPNTPVF 128 (316)
T ss_dssp EEEESSCCCGGGSCTTCEEEEEEEEEC-------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTC--CTTCEEE
T ss_pred EEEECCccChhhcccccceEEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCC--CCCCEEE
Confidence 478899999997 3 58888889998753 68999999999999999999887 899999996 9999999
Q ss_pred EEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 70 KVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 70 ~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
++.|+|+|.|.| ++|+|..++ ..++|.|++.+|.|++.++|
T Consensus 129 ~v~A~D~D~g~n--i~Y~i~~~~------~~~~F~Id~~tG~i~~~~~l 169 (316)
T 3ubf_A 129 TLQARDPDTDHN--IHYFIVRDR------TGGRFEVDERSGVVRTRGTD 169 (316)
T ss_dssp ECCEECSSTTCC--EEEEEEEEE------SSSCEEECTTTCEEEECSSC
T ss_pred EEEEECCCCCCc--eEEEEEeCC------CCCEEEEECCccEEEECCcC
Confidence 999999999876 999998754 46899999999999998865
No 16
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.92 E-value=1.3e-24 Score=156.07 Aligned_cols=105 Identities=21% Similarity=0.275 Sum_probs=94.5
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCC-------ceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEE
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNE-------NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLA 73 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~-------~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A 73 (119)
.|++.++||||. ..|.|+|.|+|+|++ +++.|+|+|.| |||+|+|.+..|.+.|+|+. ++|+.|++|.|
T Consensus 162 ~i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~--~~gt~v~~v~A 238 (316)
T 3ubf_A 162 VVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQ--KKDSDIISIKA 238 (316)
T ss_dssp EEEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTC--CTTCEEEECCE
T ss_pred EEEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCC--CCCCEEEEEEE
Confidence 478899999999 999999999999741 67889999999 99999999999999999996 99999999999
Q ss_pred EECCCCCCCeEEEEEe-cCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 74 TDGDKDRQNNIVYFLT-GQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 74 ~D~D~~~~~~i~y~i~-~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
+|+| |+.++|+|. .++ ..++|.|++.+|.|++.++|
T Consensus 239 ~D~D---n~~i~Y~i~~~~~------~~~~F~Id~~tG~i~~~~~L 275 (316)
T 3ubf_A 239 KSFA---DREIRYTLKAQGQ------GAGTFNIGPTSGIVKLAKEL 275 (316)
T ss_dssp ECTT---CCCEEEEEEEESS------CTTTEEECTTTCEEEECSCC
T ss_pred EeCC---CCEEEEEEEcCCC------CCCeEEEECCeEEEEECCcC
Confidence 9998 678999998 343 46899999999999999876
No 17
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.92 E-value=1.2e-24 Score=161.44 Aligned_cols=104 Identities=24% Similarity=0.438 Sum_probs=93.5
Q ss_pred EEEcCCCCCCCC-c---eEEEEEEEEeCCCC--ceEEEEEEEeeCCCCCCeecCCCccE-EEeCCCCCCCCcEEEEEEEE
Q psy14282 2 ALYPPGTSNLPT-L---IYELTLVASDSLNE--NKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKVLAT 74 (119)
Q Consensus 2 ~l~~~~~LDrE~-~---~y~l~v~a~D~~~~--~~~~v~I~V~DvNDn~P~f~~~~y~~-~v~E~~~~~~g~~v~~v~A~ 74 (119)
.|++.++||||. . .|.|+|.|+|.+++ +++.|.|+|.|+|||+|+|..+.|.. .|+|+. ++|+.|++|.|+
T Consensus 273 ~i~~~~~LD~E~~~~~~~y~l~V~a~dd~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~--~~gt~v~~v~A~ 350 (419)
T 3ubh_A 273 IVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDI--PLGTSILRVKAM 350 (419)
T ss_dssp EEEECSCCCTTCTTSCSEEEEEEEEECTTTSCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTC--CTTCEEEECCEE
T ss_pred EEEECcccCccccccccEEEEEEEEEeCCCCcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCC--CCCCEEEEEEEE
Confidence 478899999998 6 79999999964433 78899999999999999999999987 799996 899999999999
Q ss_pred ECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 75 DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 75 D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
|+|.|.|+.++|+|.+ ++|.|++ +|.|++.+.|
T Consensus 351 D~D~g~n~~v~Y~i~~----------~~F~Id~-~G~i~~~~~l 383 (419)
T 3ubh_A 351 DSDSGSNAEIEYLVSD----------DHFAVDS-NGIIVNNKQL 383 (419)
T ss_dssp CSSCGGGGCEEEEESC----------TTEEECT-TCEEEECSCS
T ss_pred eCCCCCCCEEEEEEcC----------CcEEECC-CeEEEECccc
Confidence 9999999999999963 4799998 8999999876
No 18
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.92 E-value=1.9e-25 Score=155.48 Aligned_cols=109 Identities=22% Similarity=0.243 Sum_probs=88.6
Q ss_pred CCCCCCCC-ceEEEEEEE---EeCCCC--ceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEE-----EEEE
Q psy14282 6 PGTSNLPT-LIYELTLVA---SDSLNE--NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK-----VLAT 74 (119)
Q Consensus 6 ~~~LDrE~-~~y~l~v~a---~D~~~~--~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~-----v~A~ 74 (119)
.+.||||. ..|.+.+.+ .+.+.. ..+.|.|.|.|+|||+|+|.+..|.+.|+|+. ++|+.|++ |.|+
T Consensus 80 ~~~LDrE~~~~~~~~~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~--~~Gt~v~~~~~~~v~A~ 157 (242)
T 4apx_B 80 GRVLDRDPPMNIHSIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELT--PVGTTIFTGFSGDNGAT 157 (242)
T ss_dssp TSCCCCSTTTCCCEEEEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTC--CTTCEEECTTTTTTSEE
T ss_pred CCceeccCCCceEEEEEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeecc--CCCCEEEEeeecccccc
Confidence 47899999 766555444 444332 56789999999999999999999999999997 99999986 7899
Q ss_pred ECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeC-CCceEEEcccc
Q psy14282 75 DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINR-TTGEIFFAPLI 118 (119)
Q Consensus 75 D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~-~tG~i~~~~~L 118 (119)
|+|.|.|+.++|+|..+.. .......|.|++ .||.|++++.|
T Consensus 158 D~D~g~N~~v~Ysi~~~~~--~~~~~~~F~Id~~~tG~i~~~~~L 200 (242)
T 4apx_B 158 DIDDGPNGQIEYVIQYNPE--DPTSNDTFEIPLMLTGNVVLRKRL 200 (242)
T ss_dssp CCSSGGGGCEEEEEECCTT--STTHHHHEECSSTTTCCEEECSCC
T ss_pred cCCCCcCCceEEEEecCCC--CcccccceEEcCCCceEEEECCcC
Confidence 9999999999999998641 111235799985 59999999876
No 19
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.91 E-value=1.1e-23 Score=160.86 Aligned_cols=107 Identities=20% Similarity=0.261 Sum_probs=98.2
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCC------CceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEE
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLN------ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~------~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~ 74 (119)
.|++.++||||. ..|.|+|.|+|++. .+++.|.|+|.|+|| +|+|....|.+.|+|+. ++|+.|+++.|+
T Consensus 281 ~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~--~~gt~v~~v~A~ 357 (550)
T 3q2v_A 281 ILKTAKGLDFEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDF--GVGQEITSYTAR 357 (550)
T ss_dssp EEEESSCCCTTTCSEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETTC--CSSCEEEECCEE
T ss_pred EEEecccCCccccceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEEEEecCC--CCCCEEEEEeCC
Confidence 477899999999 99999999999863 278999999999999 99999999999999996 999999999999
Q ss_pred ECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 75 DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 75 D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
|+|.|.|+.++|+|.+. ..++|.|++.+|.|++.+.|
T Consensus 358 D~D~g~n~~i~y~i~~~-------~~~~f~id~~tG~i~~~~~l 394 (550)
T 3q2v_A 358 EPDTFMDQKITYRIWRD-------TANWLEINPETGAIFTRAEM 394 (550)
T ss_dssp CCCCSTTCCCEEEEEEC-------TTCCEEECTTTCEEEECSCC
T ss_pred CCCCCCCCCEEEEEecC-------CCCcEEEeCCCcEEEECCcc
Confidence 99999999999999764 36789999999999998765
No 20
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.91 E-value=8.1e-24 Score=157.02 Aligned_cols=107 Identities=20% Similarity=0.329 Sum_probs=93.3
Q ss_pred EEEcCCCCCCCC-c---eEEEEEEEEeCCCC------ceEEEEEEEeeCCCCCCeecCCC--ccEEEeCCCCCCCCcEEE
Q psy14282 2 ALYPPGTSNLPT-L---IYELTLVASDSLNE------NKTTVVIHINDVNDMPPVFNTSL--YPAIMEEELPGPYPHSLL 69 (119)
Q Consensus 2 ~l~~~~~LDrE~-~---~y~l~v~a~D~~~~------~~~~v~I~V~DvNDn~P~f~~~~--y~~~v~E~~~~~~g~~v~ 69 (119)
.|++.++||||+ . .|.+.|.|+|.|.+ +.+.|.|+|.|+|||+|+|.+.. |.+.|+|+. ++|+.|+
T Consensus 56 ~i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~--~~gt~v~ 133 (419)
T 3ubh_A 56 AVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNA--PPNTPVF 133 (419)
T ss_dssp EEEESSCCCGGGSCTTCEEEEEEEEEC--CCSSSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTC--CTTCEEE
T ss_pred EEEECCccCccccCccceEEEEEEEEeCCCCCCCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCC--CCCCEEE
Confidence 478899999998 4 79999999998743 56899999999999999999887 789999996 9999999
Q ss_pred EEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 70 KVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 70 ~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
++.|+|+|.|.| ++|+|..+. ..++|.|++.+|.|++.+.|
T Consensus 134 ~v~A~D~D~g~n--~~y~i~~~~------~~~~F~I~~~tG~i~~~~~l 174 (419)
T 3ubh_A 134 TLQARDPDTDHN--IHYFIVRDR------TGGRFEVDERSGVVRTRGTD 174 (419)
T ss_dssp ECCEECSSTTCC--EEEEEEEES------SSSCEEECTTTCEEEECSSS
T ss_pred EEEEECCCCCce--eEEEEEeCC------CCCeEEEeCCceEEEEeccc
Confidence 999999999876 899998765 46899999999999998754
No 21
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.90 E-value=2.5e-23 Score=159.09 Aligned_cols=107 Identities=23% Similarity=0.271 Sum_probs=97.3
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCC-----C----CceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEE
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSL-----N----ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKV 71 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~-----~----~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v 71 (119)
.|++.++||||. ..|.|+|.|+|++ . .+++.|.|+|.|+|| +|.|.+..|.+.|+|+. ++|+.|++|
T Consensus 284 ~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~~v~En~--~~g~~v~~v 360 (559)
T 3q2w_A 284 LVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKIIRQEEGL--HAGTMLTTL 360 (559)
T ss_dssp EEEECSCCCTTTCSEEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEEEEEESCC--CTTCEEEEC
T ss_pred EEEeCCCCCCccCceEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccceEEEEeCCC--CCCCEEEEE
Confidence 477899999999 9999999999973 1 278999999999999 59999999999999996 899999999
Q ss_pred EEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 72 LATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 72 ~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
.|+|+|.|.|+.++|+|.+. ...+|.|++.+|.|++.+.|
T Consensus 361 ~A~D~D~g~n~~i~Ysi~~~-------~~~~f~Id~~tG~i~~~~~l 400 (559)
T 3q2w_A 361 TAQDPDRYMQQNIRYTKLSD-------PANWLKIDPVNGQITTIAVL 400 (559)
T ss_dssp CEECSCSSSCCCEEEEEEEC-------TTCCEEECTTTCEEEESSCC
T ss_pred EEECCCCCCCCceEEEEccC-------CccceEecCCceEEEEcccc
Confidence 99999999999999999875 36799999999999998765
No 22
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.90 E-value=1.1e-23 Score=160.79 Aligned_cols=107 Identities=19% Similarity=0.327 Sum_probs=97.8
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCC------CceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEE
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLN------ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~------~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~ 74 (119)
.|++.++||||. ..|.|+|.|+|++. .+++.|.|+|.|+|| +|+|.+..|.+.|+|+. ++|+.|++|.|+
T Consensus 287 ~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y~~~V~En~--~~g~~v~~v~A~ 363 (546)
T 1l3w_A 287 ILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDL--SRGEKIISLVAQ 363 (546)
T ss_dssp EEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTC--CSSEEEEECCEE
T ss_pred EEEECccCCcccccEEEEEEEEEECCCCCCCCcceeEEEEEEEEcCCC-CCcEecceEEEEEeCCC--CCCCEEEEEEEE
Confidence 477899999999 99999999999863 278999999999999 99999999999999996 899999999999
Q ss_pred ECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 75 DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 75 D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
|+|.|.|+.++|+|.++ ..++|.|++.+|.|++.+.|
T Consensus 364 D~D~g~n~~i~ysi~~~-------~~~~F~Id~~tG~i~~~~~l 400 (546)
T 1l3w_A 364 DPDKQQIQKLSYFIGND-------PARWLTVNKDNGIVTGNGNL 400 (546)
T ss_dssp CCCTTCCCCEEEEECCC-------SSCCCEEETTTTEEEECSCC
T ss_pred CCCCCCCceEEEEECCC-------CCCcEEEeCCcEEEEECCcc
Confidence 99999999999999874 25799999999999998765
No 23
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.89 E-value=7.4e-23 Score=163.17 Aligned_cols=107 Identities=19% Similarity=0.327 Sum_probs=98.0
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCC------CceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEE
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLN------ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLAT 74 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~------~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~ 74 (119)
.|++.++||||. ..|.|+|.|+|++. .++++|+|+|.|+|| +|+|.+..|.+.|+|+. ++|+.|++|.|+
T Consensus 436 ~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~En~--~~Gt~V~~v~A~ 512 (880)
T 1q55_A 436 ILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDL--SRGEKIISLVAQ 512 (880)
T ss_dssp EEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTC--CSSEEEEECCEE
T ss_pred EEecccCCCcccCCcEEEEEEEEECCCCCCCCcceeEEEEEEEEeCCC-CCEEecCceEEEEeCCC--CCCCEEEEEEEE
Confidence 477899999999 99999999999863 278999999999999 99999999999999996 899999999999
Q ss_pred ECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 75 DGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 75 D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
|+|.|.|+.++|+|.+. ..++|.|++.+|.|++.+.|
T Consensus 513 D~D~g~n~~v~Ysi~~~-------~~~~F~Id~~tG~I~~~~~L 549 (880)
T 1q55_A 513 DPDKQQIQKLSYFIGND-------PARWLTVNKDNGIVTGNGNL 549 (880)
T ss_dssp CCCTTCCCCEEEEECCC-------SSCCCEEETTTTEEEECSCC
T ss_pred eCCCCCCCcEEEEECCC-------CCCCEEEeCCccEEEECCcc
Confidence 99999999999999874 36899999999999998765
No 24
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.88 E-value=4.2e-24 Score=133.31 Aligned_cols=79 Identities=27% Similarity=0.317 Sum_probs=70.1
Q ss_pred EEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEE
Q psy14282 35 IHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFF 114 (119)
Q Consensus 35 I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~ 114 (119)
|+|.|+|||+|+|.+..|.++|+|+. ++|+.|+++.|+|+|.|.|+.++|+|.++. +.....+|.|++.||.|++
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~--~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~---~~~~~~~F~Id~~tG~I~~ 76 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENA--PVGTSVIQLHATDADIGSNAEIRYIFGAQV---APATKRLFALNNTTGLITV 76 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTC--CTTCEEEECCCCSCSSCCCSCCEEEECSSC---CHHHHHHEEECTTTCEEEE
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCC--CCCCEEEEEEEEeCCCCCCcEEEEEEccCC---CCCccceEEEeCCeeEEEE
Confidence 57899999999999999999999996 999999999999999999999999998632 0113579999999999999
Q ss_pred cccc
Q psy14282 115 APLI 118 (119)
Q Consensus 115 ~~~L 118 (119)
+++|
T Consensus 77 ~~~L 80 (114)
T 2ee0_A 77 QRSL 80 (114)
T ss_dssp CSCC
T ss_pred CccC
Confidence 9876
No 25
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=2.3e-23 Score=130.76 Aligned_cols=78 Identities=22% Similarity=0.241 Sum_probs=70.0
Q ss_pred EEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEE
Q psy14282 35 IHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFF 114 (119)
Q Consensus 35 I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~ 114 (119)
++|.|+|||+|+|.+..|.+.|+|+. ++|+.|+++.|+|+|.|.|+.++|+|.++. .+...+|.|++.||.|++
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~--~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~----~~~~~~F~Id~~tG~I~~ 75 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENS--APGTPILQLRAADLDVGVNGQIEYVFGAAT----ESVRRLLRLDETSGWLSV 75 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTC--CTTCEEEECCCCCSSSSCCSCCCCEECSCC----TTHHHHEEECTTTCEEEE
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCC--CCCCEEEEEEEEeCCCCCCCeEEEEEecCC----CccccEEEEeCCceEEEE
Confidence 57899999999999999999999996 899999999999999999999999998753 112468999999999999
Q ss_pred cccc
Q psy14282 115 APLI 118 (119)
Q Consensus 115 ~~~L 118 (119)
+++|
T Consensus 76 ~~~L 79 (119)
T 2yst_A 76 LHRI 79 (119)
T ss_dssp CSCC
T ss_pred CccC
Confidence 9876
No 26
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=4.6e-15 Score=93.31 Aligned_cols=49 Identities=24% Similarity=0.281 Sum_probs=44.9
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCC---ceEEEEEEEeeCCCCCCeecCC
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNE---NKTTVVIHINDVNDMPPVFNTS 50 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~---~~~~v~I~V~DvNDn~P~f~~~ 50 (119)
.|++.++||||. +.|.|+|.|+|+|.+ +++.|.|+|.|+|||+|+|.++
T Consensus 71 ~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~~ 123 (123)
T 2yqg_A 71 ELNVTSILDREETPFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQD 123 (123)
T ss_dssp EEEECSCCBTTTBSEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCCC
T ss_pred EEEECcccCcccCceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCCC
Confidence 478899999999 999999999999876 6789999999999999999864
No 27
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.55 E-value=7.6e-15 Score=90.62 Aligned_cols=46 Identities=26% Similarity=0.287 Sum_probs=34.1
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCC---ceEEEEEEEeeCCCCCCee
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNE---NKTTVVIHINDVNDMPPVF 47 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~---~~~~v~I~V~DvNDn~P~f 47 (119)
.|++.++||||. +.|.|+|.|+|+|.+ +++.|.|+|.|+|||+|+|
T Consensus 61 ~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 61 QLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEECTTSCBCSCCEEEEEEEC---------
T ss_pred EEEECCcCCcccCCeEEEEEEEEECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 478899999999 999999999999865 6899999999999999998
No 28
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.44 E-value=1.7e-13 Score=83.18 Aligned_cols=59 Identities=31% Similarity=0.459 Sum_probs=51.2
Q ss_pred ccEEEeCCCCCCCCcEEEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 52 YPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 52 y~~~v~E~~~~~~g~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
+.++|+||.+.+.|+.|++|. +|+|.| |+.++|+|.++. ..+.|.|++.||.|+++++|
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~------~~~~F~Id~~tG~i~~~~~L 64 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEG------AGIVFTIDDTTGDIHAIQRL 64 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETT------BTTTEEECTTTCEEEECSCC
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCC------CCceEEEeCCCCCEEECeec
Confidence 578999996334689999999 999999 999999998754 34789999999999999876
No 29
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.43 E-value=1.9e-13 Score=82.78 Aligned_cols=59 Identities=32% Similarity=0.504 Sum_probs=49.0
Q ss_pred ccEEEeCCCCCCCCcEEEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 52 YPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 52 y~~~v~E~~~~~~g~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
+.++|+||.+.+.|+.|+++. +|+|.| |+.++|+|.++. ..++|.||+.||.|+++++|
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~------~~~~F~Id~~tG~i~~~~~L 63 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDG------AGTIFQINDITGDIHAIKRL 63 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETT------BTTTEEECTTTCEEEECSCC
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCC------CCCEEEEECCccEEEECccC
Confidence 678999996334899999997 999999 999999998754 34689999999999999876
No 30
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.42 E-value=1.3e-13 Score=93.76 Aligned_cols=67 Identities=21% Similarity=0.460 Sum_probs=58.9
Q ss_pred CCCCCeecCCCcc--EEEeCCCCCCCCcEEEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 41 NDMPPVFNTSLYP--AIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 41 NDn~P~f~~~~y~--~~v~E~~~~~~g~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
-|++|+|.+..|. +.|+|+. ++|+.|+++.|+|+|. +.++|+|.++. ..++|.|++.||.|++.++|
T Consensus 2 vn~~P~F~~~~y~~~~~V~E~~--~~Gt~v~~v~A~D~D~---~~~~y~i~~~~------~~~~F~Id~~tG~i~~~~~L 70 (210)
T 3mvs_A 2 VNRLPFFTNHFFDTYLLISEDT--PVGSSVTQLLARDMDN---DPLVFGVSGEE------ASRFFAVEPDTGVVWLRQPL 70 (210)
T ss_dssp CCCCCEECCGGGTSCEEEETTC--CTTCEEEECCEECTTC---CCCEEEEESHH------HHHHEEECTTTCEEEESSCC
T ss_pred CCCCCccCCCccceEEEEeCCC--CCCCEEEEEEEEeCCC---CcEEEEEeCCC------CCCcEEEeCCCCEEEECCcc
Confidence 3679999999998 6999997 9999999999999995 46899998754 35789999999999999876
No 31
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.39 E-value=8.3e-14 Score=87.82 Aligned_cols=55 Identities=16% Similarity=0.000 Sum_probs=47.0
Q ss_pred EEEcCCCCCCCC-----ceEEEEEEEEeCCCCceEEEEEEEeeCCCCCCeecCCCccEEE
Q psy14282 2 ALYPPGTSNLPT-----LIYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIM 56 (119)
Q Consensus 2 ~l~~~~~LDrE~-----~~y~l~v~a~D~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v 56 (119)
.|++.++||||+ +.|.|.+.|.+......+.|.|+|.|+|||+|+|.++.|.+++
T Consensus 65 ~i~~~~~LDRE~~c~~~~~y~l~v~a~~~~p~~~~~V~I~V~DvNDN~P~F~~~~y~vs~ 124 (125)
T 1wyj_A 65 NLLLKEKLDREELCGSTNPCILHFQVLLKSPVQFIQGEIQLQDVNDHAPEFMEDESGPSS 124 (125)
T ss_dssp EEEESSCCCSTTTCTTCSSCCBCCEEEETTTTEEECCCEEECCCCCCCCCCCCCCCCCCC
T ss_pred EEEECccccchhhcccCCcEEEEEEEEECCCCeEEEEEEEEEEccCCCCcCCCcEEEEec
Confidence 478899999998 3689999999865447788999999999999999999997653
No 32
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=1.3e-12 Score=81.50 Aligned_cols=44 Identities=30% Similarity=0.269 Sum_probs=41.0
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCC---ceEEEEEEEeeCCCCCC
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNE---NKTTVVIHINDVNDMPP 45 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~---~~~~v~I~V~DvNDn~P 45 (119)
.|++.++||||. ..|.|+|.|+|+|.+ +++.|.|+|.|+|||+|
T Consensus 72 ~I~~~~~LD~E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 72 WLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp EEEECSCCCTTTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred EEEECccCCcccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 478899999999 999999999999876 68999999999999998
No 33
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=5e-14 Score=88.54 Aligned_cols=74 Identities=24% Similarity=0.350 Sum_probs=62.6
Q ss_pred CCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 40 VNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 40 vNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
.+.+.|.|..+.|.+.+.|+. ++|+.|++|. +|+|.|.|+.++|+|.++.. ......+|.|++.||.|+++++|
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~--~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~--~~~~~~~F~Id~~tG~i~~~~~L 78 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDL--SKKNPIAKIH-SDLAEERGLKITYKYTGKGI--TEPPFGIFVFNKDTGELNVTSIL 78 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCC--CSSCCCBCCC-CHHHHHHTCCCEEEEEEBTT--TBSSCSSEEEETTTTEEEECSCC
T ss_pred ccccCCccCCCCEEEEecCCC--CCCCEEEEEE-ECCCCCCCceEEEEEecCCC--CCCcCCCEEEeCCcCEEEECccc
Confidence 478999999998888888885 9999999999 69999999999999997531 11235799999999999999876
No 34
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.24 E-value=1e-11 Score=75.11 Aligned_cols=59 Identities=22% Similarity=0.316 Sum_probs=48.8
Q ss_pred ccEEEeCCCCCCC--CcEEEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 52 YPAIMEEELPGPY--PHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 52 y~~~v~E~~~~~~--g~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
+.++|+||. ++ |+.|++|+|+|+|. .++|+|.+... .....+.|.||+.||.|+++++|
T Consensus 5 ~~~~V~En~--~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~--~~~~~~~F~Id~~tG~i~~~~~L 65 (99)
T 3k6d_A 5 PSISIPENQ--RIPFPKIVGRVVVSDRIP----GSKIKLYGKGV--DQEPKGIFKINENSGEVSVTKAL 65 (99)
T ss_dssp CCEEEETTC--CSCSSEEEEECBCSSCCT----TCEEEEESBTT--TBSSTTSEEECTTTCEEEECSCC
T ss_pred CcEEEeCCC--CCCCCcEEEEEEEECCCC----cEEEEEecCcC--CCCCCCEEEEECCceEEEECcCC
Confidence 578999997 77 99999999999997 69999986320 11246899999999999999876
No 35
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.19 E-value=1.1e-11 Score=86.18 Aligned_cols=64 Identities=17% Similarity=0.168 Sum_probs=53.3
Q ss_pred eecCCCccEEEeCCCCCCCCcEEEEEEEEECCCCC--CCeEE------EEEecCCcCCCCCCCCcEEEeCCCceEEEccc
Q psy14282 46 VFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDR--QNNIV------YFLTGQGIDADNPGNSKFDINRTTGEIFFAPL 117 (119)
Q Consensus 46 ~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~D~~~--~~~i~------y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~ 117 (119)
.|.+..|.+.|+|+. ++|+.|++|.|+|+|.|. +..+. |+|..+ ...+|.|++.||.|+++++
T Consensus 2 ~F~~~~Y~~~V~E~~--~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~-------~~~~F~Id~~tG~i~~~~~ 72 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQ--AAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLH-------ENNWIRIQEDTGLLYLQRS 72 (246)
T ss_dssp EESCSEEEEEEETTB--CTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEE-------ECCSEEECTTTCEEEESSC
T ss_pred CccCCceEEEeeCCC--CCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCC-------CCCEEEECCCcEEEEECCc
Confidence 599999999999997 999999999999999864 44454 555443 2578999999999999987
Q ss_pred c
Q psy14282 118 I 118 (119)
Q Consensus 118 L 118 (119)
|
T Consensus 73 L 73 (246)
T 2x2u_A 73 L 73 (246)
T ss_dssp B
T ss_pred C
Confidence 6
No 36
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.18 E-value=4.5e-11 Score=72.40 Aligned_cols=59 Identities=27% Similarity=0.474 Sum_probs=47.9
Q ss_pred ccEEEeCCCCCCC--CcEEEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 52 YPAIMEEELPGPY--PHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 52 y~~~v~E~~~~~~--g~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
..+.|+||. +. |+.|++|.|+|+|. .++|+|.+... .....+.|.||+.||.|+++++|
T Consensus 6 ~~~~V~EN~--~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~--~~~~~~~F~Id~~tG~i~~~~~L 66 (100)
T 3k6f_A 6 SPILIPENQ--RQPFPRDVGKVVDSDRPE----GSKFRLTGKGV--DQDPKGTFRINENTGSVSVTRTL 66 (100)
T ss_dssp CCEEEETTC--CSSSCEEEEECEETTCCT----TCEEEEEEBTT--TBSSTTSEEECTTTCEEEECSCC
T ss_pred CcEEEeCCC--CCCCCcEEEEEEEEcCCC----CEEEEEeCCCC--CCCcCCEEEEECCCCEEEECccc
Confidence 368999997 55 89999999999997 58999986321 11245799999999999999876
No 37
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.15 E-value=8.5e-11 Score=71.04 Aligned_cols=58 Identities=26% Similarity=0.519 Sum_probs=47.2
Q ss_pred cEEEeCCCCCCCC--cEEEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 53 PAIMEEELPGPYP--HSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 53 ~~~v~E~~~~~~g--~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
.++|+||. +.| +.|++|.|+|+|. .++|+|.+... .....+.|.||+.||.|+++++|
T Consensus 6 ~~~v~EN~--~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~--~~~~~~~F~Id~~tG~i~~~~~L 65 (99)
T 3k6i_A 6 PILIPENQ--RPPFPRSVGKVIRSEGTE----GAKFRLSGKGV--DQDPKGIFRINEISGDVSVTRPL 65 (99)
T ss_dssp CEEEETTC--CSSSCEEEEECEETTCCS----SEEEEEESBTT--TBSSTTSEEECTTTCEEEECSCC
T ss_pred cEEEeCCC--CCCCCeEEEEEEEEcCCC----eEEEEEeCCCC--CCCcCCEEEEECCCcEEEECccc
Confidence 57999997 554 8999999999998 79999986421 11235799999999999999876
No 38
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.12 E-value=1.1e-10 Score=79.59 Aligned_cols=45 Identities=16% Similarity=0.110 Sum_probs=33.8
Q ss_pred EEEcC-CCCCCCC-ceEEEEEEEEeCCCC-----ceEEEEEEEeeCCCCCCe
Q psy14282 2 ALYPP-GTSNLPT-LIYELTLVASDSLNE-----NKTTVVIHINDVNDMPPV 46 (119)
Q Consensus 2 ~l~~~-~~LDrE~-~~y~l~v~a~D~~~~-----~~~~v~I~V~DvNDn~P~ 46 (119)
.|++. ++||||. ..|.|.|.|+|+|.+ +++.|.|+|.|+|||+|+
T Consensus 164 ~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 164 IIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp EEEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEEEEEEEEEEC-------
T ss_pred EEEEcccCCCcccCCEEEEEEEEEECCCCCCCceeEEEEEEEEEECCCCCCC
Confidence 36777 8999999 999999999999853 688999999999999995
No 39
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.11 E-value=1.1e-10 Score=71.75 Aligned_cols=61 Identities=25% Similarity=0.462 Sum_probs=48.4
Q ss_pred CccEEEeCCCCCCCCcE--EEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 51 LYPAIMEEELPGPYPHS--LLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 51 ~y~~~v~E~~~~~~g~~--v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
.|.++|+||. ++|+. |+++ |.|.+.|+.++|+|.++.. .....++|.|++.||.|+++++|
T Consensus 6 ~~~~~v~En~--~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~--~~~~~~~F~Id~~tG~i~~~~~L 68 (110)
T 1ncg_A 6 IPPINLPENS--RGPFPQELVRI---RSGRDKNLSLRYSVTGPGA--DQPPTGIFIINPISGQLSVTKPL 68 (110)
T ss_dssp CCCEEECSSC--CCCSSEEEEEC---CCGGGGGSCCEEEEESBTT--TBSSTTSEEECTTTCEEEECSCC
T ss_pred eeeEEEeCCC--CCCCcEEEEEE---eCCCCCCCEEEEEEeCCCC--CCCcCCEEEEECCCCEEEECCcC
Confidence 4789999997 88984 5555 7888889999999997420 11246799999999999999876
No 40
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.10 E-value=2.4e-11 Score=76.45 Aligned_cols=60 Identities=10% Similarity=0.130 Sum_probs=50.5
Q ss_pred CCCccEEEeCCCCCCCCcEEEEEEEEECCCCCCCeE---EEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 49 TSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNI---VYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 49 ~~~y~~~v~E~~~~~~g~~v~~v~A~D~D~~~~~~i---~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
...|.++|+|+. ++|+.|++| |+|+|.+. +.+ +|+|.++. ..++|.||+.||.|+++++|
T Consensus 10 ~~~~~~~V~E~~--~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~------~~~~F~Id~~tG~i~~~~~L 72 (125)
T 1wyj_A 10 SATITYSVLEET--DRGSLVGNL-AKDLGLSL-RELITRGAQILSKG------NKQLLQLEQKSGNLLLKEKL 72 (125)
T ss_dssp CCCCCEEECSSC--CTTCEEEES-TTTTTCCH-HHHHHTTCEEECSS------SSCSEEECSSSSEEEESSCC
T ss_pred CceEEEEEECCC--CCCCEEEEE-EecCCCCC-CceeeEEEEEecCC------CCCeEEEECCccEEEECccc
Confidence 456788999996 999999999 99998764 344 89998754 46799999999999999876
No 41
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.10 E-value=1.2e-10 Score=71.11 Aligned_cols=62 Identities=32% Similarity=0.587 Sum_probs=47.2
Q ss_pred ccEEEeCCCCCCCCcEEEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 52 YPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 52 y~~~v~E~~~~~~g~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
+.++|+||.+.+.|..|++|.| |.+.|+.++|+|.+++. ..+..++|.||+.||.|+++++|
T Consensus 9 ~~~~V~En~~~~~~~~v~~v~A---d~g~N~~i~Ysi~~~~~--~~~~~~~F~Id~~tG~I~~~~~L 70 (105)
T 2omz_B 9 PPISCPENEKGPFPKNLVQIKS---NKDKEGKVFYSITGQGA--DTPPVGVFIIERETGWLKVTEPL 70 (105)
T ss_dssp CCCCEESSCCSSSSEEEEECEE---GGGGSSCCEEEEEEBTT--TBSSTTSEEECTTTCEEEECSCC
T ss_pred cCEEEeCCCCCCCCcEEEEEEC---CCCCCCeEEEEEeCCCC--CCCccCEEEEeCCCCEEEECccC
Confidence 3678999962114789999999 34679999999988541 11124689999999999999876
No 42
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.00 E-value=1.2e-11 Score=75.34 Aligned_cols=60 Identities=15% Similarity=0.145 Sum_probs=49.8
Q ss_pred CCccEEEeCCCCCCCCcEEEEEEEEECCCCCC--CeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 50 SLYPAIMEEELPGPYPHSLLKVLATDGDKDRQ--NNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 50 ~~y~~~v~E~~~~~~g~~v~~v~A~D~D~~~~--~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
..+.++|+|+. ++|+.|++| |.|.|.+.+ +.++|+|.++. ..++|.||+.||.|++++.|
T Consensus 3 ~~~~~~V~E~~--~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~------~~~~F~Id~~tG~i~~~~~L 64 (103)
T 1wuz_A 3 SQIHYSIPEEA--KHGTFVGRI-AQDLGLELTELVPRLFRVASKD------RGDLLEVNLQNGILFVNSRI 64 (103)
T ss_dssp CEEEEEEESSC--CTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSS------CSCSEEEETTTTEEEECSCC
T ss_pred eeEEEEEECCC--CCCCEEEEE-EeccCCCCcccccEEEEEEeCC------CccEEEEECCeEEEEECCcC
Confidence 34678999996 999999999 999886532 45899998754 46899999999999998865
No 43
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.94 E-value=2.8e-09 Score=65.78 Aligned_cols=40 Identities=28% Similarity=0.361 Sum_probs=37.1
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCC-ceEEEEEEEeeCC
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNE-NKTTVVIHINDVN 41 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~-~~~~v~I~V~DvN 41 (119)
.|++.++||||. +.|.|.|.|+|+|.+ ++++|.|+|+|+|
T Consensus 73 ~I~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~~v~I~V~DvN 114 (114)
T 2ee0_A 73 LITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVN 114 (114)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEESSSSSCEEEEEEEEEECCC
T ss_pred EEEECccCCcccCcEEEEEEEEEECCCCceEEEEEEEEEECC
Confidence 478899999999 999999999999876 7899999999998
No 44
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=98.92 E-value=3e-09 Score=64.81 Aligned_cols=39 Identities=18% Similarity=0.134 Sum_probs=35.0
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCC---ceEEEEEEEeeC
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNE---NKTTVVIHINDV 40 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~---~~~~v~I~V~Dv 40 (119)
.|++.++||||+ +.|+|+|.|+|+|.+ +++.|.|+|.|+
T Consensus 63 ~I~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 63 WLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEECTTSCBSSCCEEEEEEEEC-
T ss_pred EEEECccCCcCCCCeEEEEEEEEECCCCceeeEEEEEEEEEeC
Confidence 478899999999 999999999999876 679999999986
No 45
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=98.90 E-value=3.1e-09 Score=72.35 Aligned_cols=61 Identities=23% Similarity=0.372 Sum_probs=51.2
Q ss_pred cEEEeCCCCCCCCcEEEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 53 PAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 53 ~~~v~E~~~~~~g~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
.++|+||. + |+.++++.|.|.|.+.|+.++|+|.++.. ..+..++|.|++.||.|+++++|
T Consensus 6 ~~~V~En~--~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~--~~~~~~~F~Id~~tG~i~~~~~L 66 (215)
T 2qvi_A 6 PINLPENS--R-GPFPQELVRIRSDRDKNLSLRYSVTGPGA--DQPPTGIFIINPISGQLSVTKPL 66 (215)
T ss_dssp CEEEESSC--C-CCSSEEEEECCCGGGGTSCEEEEEESTTS--SSTTCSSEEECTTTCEEEECSCC
T ss_pred cEEEcCCC--C-CCCCEEEEEEeCCCCCCceEEEEEECCCC--CCCCCCcEEEeCCccEEEECccc
Confidence 68999995 5 88899999999999999999999997541 11235799999999999999876
No 46
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=98.88 E-value=7.7e-10 Score=74.83 Aligned_cols=59 Identities=27% Similarity=0.416 Sum_probs=48.1
Q ss_pred ccEEEeCCCCCCCCcEEEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 52 YPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 52 y~~~v~E~~~~~~g~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
..+.|+|+.+.+.+..++++ |+|+|.| ++.++|+|.++. ..++|.|++.||.|++.++|
T Consensus 5 ~~~~v~En~~~~~~~~v~~~-a~D~D~g-~~~i~Y~l~~~~------~~~~F~Id~~tG~i~~~~~L 63 (207)
T 3lnd_A 5 NQFFLLEEYTGSDYQYVGKL-HSDQDRG-DGSLKYILSGDG------AGDLFIINENTGDIQATKRL 63 (207)
T ss_dssp CCEEEESCBCSSSCEEEEEC-CCTTCCS-STTBCCCCCSSS------BTTTEEECTTTCEEEECSCC
T ss_pred cccEEEeecCCCCCEEEEEE-EeCCCCC-CceEEEEEECCC------CCCeEEEECCceEEEECCCc
Confidence 36789999733345688888 9999999 678999998754 34699999999999998876
No 47
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=98.83 E-value=1.1e-08 Score=61.78 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=34.4
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCC---ceEEEEEEEee
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNE---NKTTVVIHIND 39 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~---~~~~v~I~V~D 39 (119)
.|++.++||||+ +.|.|+|.|+|+|.+ +++.|.|+|.|
T Consensus 59 ~i~~~~~LDrE~~~~y~l~V~A~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 59 SVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEECcccCCcCCCEEEEEEEEEECCCCcccceEEEEEEEEC
Confidence 478899999999 999999999999987 67889999987
No 48
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=98.82 E-value=1.3e-08 Score=61.24 Aligned_cols=38 Identities=16% Similarity=0.153 Sum_probs=34.4
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCC---ceEEEEEEEee
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNE---NKTTVVIHIND 39 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~---~~~~v~I~V~D 39 (119)
.|++.++||||+ +.|.|+|.|+|+|.+ +++.|.|+|.|
T Consensus 58 ~i~~~~~LDrE~~~~y~l~v~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 58 DVSVTRPLDREAIANYELEVEVTDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEEETTSCEEEEEEEEEEEEEC
T ss_pred EEEECcccCCccCCEEEEEEEEEECCCCceeeeEEEEEEEEC
Confidence 478899999999 999999999999986 67889999987
No 49
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=98.82 E-value=1.3e-08 Score=61.26 Aligned_cols=38 Identities=13% Similarity=0.155 Sum_probs=34.3
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCCC---ceEEEEEEEee
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLNE---NKTTVVIHIND 39 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~~---~~~~v~I~V~D 39 (119)
.|++.++||||+ +.|.|+|.|+|+|.+ +++.|.|+|.|
T Consensus 58 ~i~~~~~LDrE~~~~y~l~V~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 58 EVSVTKALDREAIPSYQLQVETTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEECcCCCcccCceEEEEEEEEECCCCceeeEEEEEEEEEC
Confidence 478899999999 999999999999887 57889999887
No 50
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=98.81 E-value=1.5e-08 Score=61.07 Aligned_cols=38 Identities=18% Similarity=0.189 Sum_probs=33.8
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCC-C---ceEEEEEEEee
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLN-E---NKTTVVIHIND 39 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~-~---~~~~v~I~V~D 39 (119)
.|++.++||||+ +.|.|+|.|+|+|. + +++.|.|+|.|
T Consensus 57 ~i~~~~~LDrE~~~~y~l~V~A~D~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 57 DIHAIQRLDREERSQYTLRAQALDRRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEEEC
T ss_pred CEEECeecCCccCCeEEEEEEEEECCCCCCcceeEEEEEEEeC
Confidence 478889999999 99999999999983 4 78899999987
No 51
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=98.78 E-value=1.9e-08 Score=60.51 Aligned_cols=38 Identities=18% Similarity=0.177 Sum_probs=34.0
Q ss_pred EEEcCCCCCCCC-ceEEEEEEEEeCCC-C---ceEEEEEEEee
Q psy14282 2 ALYPPGTSNLPT-LIYELTLVASDSLN-E---NKTTVVIHIND 39 (119)
Q Consensus 2 ~l~~~~~LDrE~-~~y~l~v~a~D~~~-~---~~~~v~I~V~D 39 (119)
.|++.++||||+ +.|.|+|.|+|+|. + +++.|.|+|.|
T Consensus 56 ~i~~~~~LDrE~~~~y~l~v~A~D~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 56 DIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEECC
T ss_pred EEEECccCCCcCCCeEEEEEEEEECCCCCCcceeEEEEEEEEC
Confidence 478899999999 99999999999986 3 78899999987
No 52
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=98.77 E-value=1.1e-08 Score=69.45 Aligned_cols=61 Identities=30% Similarity=0.513 Sum_probs=48.3
Q ss_pred cEEEeCCCCCCCCcEEEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 53 PAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 53 ~~~v~E~~~~~~g~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
.++|+|+.+.+.|+.|+++.| |.|. |+.++|+|.++.. ..+..++|.|++.||.|++.++|
T Consensus 6 ~~~V~En~~~~~~~~v~~v~a-D~d~--n~~v~Ysi~~~~~--~~~~~~~F~Id~~tG~i~~~~~L 66 (213)
T 3qrb_A 6 AISCPENEKGEFPKNLVQIKS-NRDK--ETKVFYSITGQGA--DKPPVGVFIIERETGWLKVTQPL 66 (213)
T ss_dssp EEEEETTCCSSSSEEEEECCC-GGGG--TSCEEEEEESBTT--TBSSTTSEEECTTTCEEEECSCC
T ss_pred CEEEeCCCCCCCCcEEEEEEE-CCCC--CceEEEEEEcCCC--CCCCCCeEEEECCCCEEEECCcc
Confidence 689999973337888999999 7775 7899999998541 12245699999999999998876
No 53
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=98.64 E-value=5.2e-08 Score=65.63 Aligned_cols=55 Identities=20% Similarity=0.411 Sum_probs=46.7
Q ss_pred ccEEEeCCCCCCCC--cEEEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 52 YPAIMEEELPGPYP--HSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 52 y~~~v~E~~~~~~g--~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
..++|+||. +.| ..|+++. +|+|.|.+ +|+|.+++ ..++|.|++.||.|+++++|
T Consensus 5 ~~~~V~En~--~~~~~~~v~~v~-~D~D~g~~---~Y~i~~~~------~~~~F~Id~~tG~i~~~~~L 61 (203)
T 3ppe_A 5 NRMHIREEI--DSPLPHHVGKLT-SSVGNKNA---MYIIEGES------ANTIFKVQGYDGDIYAFERL 61 (203)
T ss_dssp SEEEEETTC--CSSSCEEEEECC-BCCCCTTE---EEEEEETT------BTTTEEEETTTTEEEESSCC
T ss_pred ccEEEEccC--CCCCCEEEEEEE-ecCCCCCc---EEEEecCC------CCCeEEEECCcCEEEECccc
Confidence 568999997 555 8889988 99998866 99999865 45799999999999998876
No 54
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=98.55 E-value=7.3e-08 Score=65.48 Aligned_cols=59 Identities=27% Similarity=0.474 Sum_probs=47.3
Q ss_pred ccEEEeCCCCCCCC--cEEEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 52 YPAIMEEELPGPYP--HSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 52 y~~~v~E~~~~~~g--~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
..++|+|+. +.| ..++++.|+|+|. .++|+|.+... .....++|.|++.||.|++.++|
T Consensus 6 ~~~~V~En~--~~g~~~~v~~v~a~D~d~----~i~Y~i~~~~~--~~~~~~~F~Id~~tG~i~~~~~L 66 (218)
T 3k5r_A 6 SPILIPENQ--RQPFPRDVGKVVDSDRPE----GSKFRLTGKGV--DQDPKGTFRINENTGSVSVTRTL 66 (218)
T ss_dssp CCEEEETTC--CSSCCEEEEECBCTTCCT----TCEEEEEEBTT--TBSSTTSEEECTTTCEEEECSCC
T ss_pred CcEEEecCC--CCCCCEEEEEEEecCCCc----eEEEEEEcCCC--CCCCCCeEEEeCCceEEEECCcC
Confidence 478999997 666 8899999998876 68999986431 12246899999999999999876
No 55
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=98.32 E-value=6.2e-07 Score=54.27 Aligned_cols=40 Identities=15% Similarity=0.188 Sum_probs=30.6
Q ss_pred EEEcCCCCCCCC-c------eEEEEEEEEeCCCCceEEEEEEEeeCCCC
Q psy14282 2 ALYPPGTSNLPT-L------IYELTLVASDSLNENKTTVVIHINDVNDM 43 (119)
Q Consensus 2 ~l~~~~~LDrE~-~------~y~l~v~a~D~~~~~~~~v~I~V~DvNDn 43 (119)
.|++.++||||+ . .|.+.+.+ ......+.|.|+|+|+|||
T Consensus 57 ~i~~~~~LDRE~~~~~~~~~~~~~~v~~--~~p~~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 57 ILFVNSRIDREELCGRSAECSIHLEVIV--DRPLQVFHVEVEVRDINDN 103 (103)
T ss_dssp EEEECSCCSHHHHCSSSSSCEEEEEEEE--TTTTEEEEEEEEEECCSCC
T ss_pred EEEECCcCccccccCCCCcEEEEEEEEE--CCCCEEEEEEEEEEEcCCC
Confidence 478899999998 4 45555555 3223688999999999998
No 56
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=98.04 E-value=7.7e-06 Score=56.51 Aligned_cols=57 Identities=12% Similarity=0.092 Sum_probs=46.3
Q ss_pred CCccEEEeCCCCCCCCcEEEEEEEEEC-CCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEc
Q psy14282 50 SLYPAIMEEELPGPYPHSLLKVLATDG-DKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFA 115 (119)
Q Consensus 50 ~~y~~~v~E~~~~~~g~~v~~v~A~D~-D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~ 115 (119)
+.|.++|+|+. ++|+.+..+.+.|. |.+.|+.++|+|.+.. ..+|.|++.+|.+++.
T Consensus 20 P~~~vsV~E~s--p~GTvv~~~~~~~~~d~~~n~~i~ysl~~~~-------~~~f~id~~tg~~~l~ 77 (242)
T 4apx_B 20 PATIVAIDEES--RNGTILVDNMLIKGTAGGPDPTIELSLKDNV-------DYWVLLDPVKQMLFLN 77 (242)
T ss_dssp SSEEEEEETTC--CTTCEEESCCCBSSCBSSSSCSEEEEEESCG-------GGCEEEETTTTEEEEC
T ss_pred CeEEEEeeCCC--CCCCEEEEEEEecCCCCCCCCEEEEEEecCC-------CceEEECCCCCEEEEE
Confidence 45788999996 99999887666555 4567889999998753 5789999999999874
No 57
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=93.35 E-value=1.5 Score=31.00 Aligned_cols=76 Identities=14% Similarity=0.149 Sum_probs=44.2
Q ss_pred CCC-ceEEEEEEEEeCCCC--ceEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEECCCCCCCeEEEE
Q psy14282 11 LPT-LIYELTLVASDSLNE--NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYF 87 (119)
Q Consensus 11 rE~-~~y~l~v~a~D~~~~--~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~D~~~~~~i~y~ 87 (119)
+|. ..|.+.+..-.++.. .....+|+|.| ||++|.|.-..-...|.|+. |...++|.-+-.-. ..-.+.|+
T Consensus 87 ~E~dEtF~v~Ls~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~----g~~~~~V~Rs~~~~-g~vtV~~~ 160 (298)
T 3rb5_A 87 FEEDECFYIRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV----GRFELKVMRYSGAR-GTVIVPYW 160 (298)
T ss_dssp CCCCEEEEEEEECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC----CCEEEEEEEESCCC-SCEEEEEE
T ss_pred ccCcEEEEEEEeCCCCCcEECCCceEEEEEec-cccccccccccccEEeecCC----ceEEEEEEEEecCC-CCEEEEEE
Confidence 455 666666654332221 22345566666 68899876655577889973 66666666554322 23457888
Q ss_pred EecCC
Q psy14282 88 LTGQG 92 (119)
Q Consensus 88 i~~~~ 92 (119)
...+.
T Consensus 161 T~dGT 165 (298)
T 3rb5_A 161 TENDT 165 (298)
T ss_dssp EEEC-
T ss_pred ecCCc
Confidence 76664
No 58
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=89.87 E-value=0.32 Score=31.36 Aligned_cols=64 Identities=14% Similarity=0.328 Sum_probs=47.5
Q ss_pred CCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEECCCCCCCeEEEEEecCCcCCCCCCCCcEEEeCCCceEEEcccc
Q psy14282 41 NDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQGIDADNPGNSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 41 NDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i~~~~~L 118 (119)
-.+-|-|.+..|...++-+. ..|..+++|.-.|-.. +..+.|.-.+ ...|.|+++ |.|++++.+
T Consensus 30 ~~C~pGF~~~~~~~~vp~~l--~~g~~lgkV~F~dC~g--~~~~~~~ssD---------p~dFkV~~D-GtVya~r~v 93 (159)
T 1op4_A 30 ALCKTGFPEDVYSAVLPKDV--HEGQPLLNVKFSNCNR--KRKVQYESSE---------PADFKVDED-GTVYAVRSF 93 (159)
T ss_dssp CCCCCBCCSCEEEECCCCSS--CSSCCEEECCCBCCSS--CCCEEEECCC---------SSEEEEETT-TEEEEESCC
T ss_pred ccccCCcCcceeEEeccccc--cCCceeceeecccCCC--CCceeEEcCC---------CCCeEEeCC-CcEEEecce
Confidence 34678999999966676776 8899999999888753 4567776432 227999875 888888764
No 59
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.72 E-value=2.4 Score=24.80 Aligned_cols=29 Identities=21% Similarity=0.306 Sum_probs=23.6
Q ss_pred ceEEEEEEEEeCCCC-ceEEEEEEEeeCCC
Q psy14282 14 LIYELTLVASDSLNE-NKTTVVIHINDVND 42 (119)
Q Consensus 14 ~~y~l~v~a~D~~~~-~~~~v~I~V~DvND 42 (119)
..|.|.+.++|..+. ++..+.|+|...+.
T Consensus 69 G~y~f~LTVtD~~G~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 69 GTYVFTLTVKDERNLQSQSSVNVIVKEESG 98 (102)
T ss_dssp SEEEEEEEEEBTTCCEEEEEEEEEEECCSS
T ss_pred eEEEEEEEEEeCCCCEEEeEEEEEEcCCCC
Confidence 689999999998654 78888999887654
No 60
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=84.32 E-value=3.9 Score=24.22 Aligned_cols=43 Identities=14% Similarity=0.173 Sum_probs=32.8
Q ss_pred EEcCCCCCCCC-ceEEEEEEEEeCCCC-ceEEEEEEEeeCCCCCC
Q psy14282 3 LYPPGTSNLPT-LIYELTLVASDSLNE-NKTTVVIHINDVNDMPP 45 (119)
Q Consensus 3 l~~~~~LDrE~-~~y~l~v~a~D~~~~-~~~~v~I~V~DvNDn~P 45 (119)
|.+....|--+ -.|.++..++|..+. .++..+|.|.+..+..|
T Consensus 47 I~V~g~Vdt~k~G~Y~VtY~VtDs~Gn~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 47 IKVDGEVDTTKAGTYVLTYTVTDSKGHEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp CEEESCCCSSSCEEEEEEEEEECTTSCEEEEEEEEEEECSSCCCC
T ss_pred EEEeCcccCCCceEEEEEEEEEcCCCCEEEEEEEEEEeCCCcccC
Confidence 34456788888 899999999997554 77888899888665544
No 61
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=77.98 E-value=12 Score=24.34 Aligned_cols=67 Identities=13% Similarity=0.072 Sum_probs=37.9
Q ss_pred ceEEEEEEEEeCCCC-c-eEEEEEEEeeCCCCCCeecCCCccEEEeCCCCCC--CC-cEEEEEEEEECCCCCCCeEEEEE
Q psy14282 14 LIYELTLVASDSLNE-N-KTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGP--YP-HSLLKVLATDGDKDRQNNIVYFL 88 (119)
Q Consensus 14 ~~y~l~v~a~D~~~~-~-~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~--~g-~~v~~v~A~D~D~~~~~~i~y~i 88 (119)
..|.|+++|.|..+. + ...+.|.|.+ ..+|.-. +.-+.+. +. .| ..-++..|.|.|.+ =..+.|.+
T Consensus 61 G~htlta~A~D~aGn~s~s~~v~vtV~~--~~~Ptv~-----itsP~~g-~~~~~~~~vtl~~~AsD~~g~-V~~Ve~~~ 131 (190)
T 3pdd_A 61 GAYNLKAVAVLSDGRRIESPVTPVLVKV--IVKPTVK-----LTAPKSN-VVAYGNEFLKITATASDSDGK-ISRVDFLV 131 (190)
T ss_dssp EEEEEEEEEEETTSCEEECCCEEEEEEC--CCCCEEE-----EEECCTT-CCCBTTSEEEEEEEEECSSSC-EEEEEEEE
T ss_pred ccEEEEEEEEECCCCEeeecceeEEecc--CCCCcee-----ecCCCCC-cEEecCCeEEEEEEEECCCCc-EEEEEEEE
Confidence 579999999998654 2 2346777766 5567532 3334332 11 23 34556777776532 12345554
Q ss_pred e
Q psy14282 89 T 89 (119)
Q Consensus 89 ~ 89 (119)
.
T Consensus 132 d 132 (190)
T 3pdd_A 132 D 132 (190)
T ss_dssp T
T ss_pred C
Confidence 3
No 62
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=72.59 E-value=10 Score=21.08 Aligned_cols=28 Identities=21% Similarity=0.304 Sum_probs=19.3
Q ss_pred CCC-ceEEEEEEEEeCCCC-ceEEEEEEEe
Q psy14282 11 LPT-LIYELTLVASDSLNE-NKTTVVIHIN 38 (119)
Q Consensus 11 rE~-~~y~l~v~a~D~~~~-~~~~v~I~V~ 38 (119)
|.. -.|.+++.++|..+. .+..+.|.|.
T Consensus 55 y~~~G~Y~v~LtVtd~~G~~~t~~~~V~V~ 84 (85)
T 2y72_A 55 YKKAGTYNVTLKVTDDKGATATESFTIEIK 84 (85)
T ss_dssp CSSCEEEEEEEEEEETTSCEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEEECCCCEEEEEEEEEEc
Confidence 344 578889999987554 5666666664
No 63
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=72.29 E-value=8.8 Score=22.34 Aligned_cols=26 Identities=19% Similarity=0.247 Sum_probs=19.2
Q ss_pred ceEEEEEEEEeCCCC--ceEEEEEEEee
Q psy14282 14 LIYELTLVASDSLNE--NKTTVVIHIND 39 (119)
Q Consensus 14 ~~y~l~v~a~D~~~~--~~~~v~I~V~D 39 (119)
-.|.|.++|+|..+. ....|.|+|.+
T Consensus 61 G~htl~a~AtD~~G~~~tS~~v~vtV~~ 88 (98)
T 3pe9_A 61 GNHEISVIAYDDDDAASTPDSVKIFVKQ 88 (98)
T ss_dssp EEEEEEEEEEETTCCBCCCEEEEEEEEC
T ss_pred ccEEEEEEEEECCCCEEeeeEEEEEECc
Confidence 468899999998654 46677777764
No 64
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=70.22 E-value=9.8 Score=24.20 Aligned_cols=57 Identities=7% Similarity=-0.047 Sum_probs=29.0
Q ss_pred EEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEECCCCCCCeEEEEEecCC
Q psy14282 31 TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92 (119)
Q Consensus 31 ~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~D~~~~~~i~y~i~~~~ 92 (119)
+.+.+.|.| ||..+.|.-..-...|.|+. |..-++|.-+..+.+....+.|+...+.
T Consensus 10 ~~~~~~i~d-dd~~g~i~F~~~~y~V~E~~----G~v~vtV~R~~G~~~~~v~V~y~T~dGT 66 (160)
T 3gin_A 10 AALEVLFQG-PGPVSKIFFEQGTYQCLENC----GTVALTIIRRGGDLTNTVFVDFRTEDGT 66 (160)
T ss_dssp ------------CEEEEEESCSEEEEETTS----SEEEEEEEEESSCTTSCEEEEEEEEESS
T ss_pred ceEEEEEec-CCCccEEEEeCCEEEEEcCc----EEEEEEEEEccCCCCcEEEEEEEEECCc
Confidence 445566666 45566665444567788974 6555566555444433456899988776
No 65
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=57.95 E-value=16 Score=22.37 Aligned_cols=11 Identities=27% Similarity=0.483 Sum_probs=6.0
Q ss_pred EEEEEEEECCC
Q psy14282 68 LLKVLATDGDK 78 (119)
Q Consensus 68 v~~v~A~D~D~ 78 (119)
.++|.-.|.|.
T Consensus 106 ~atvtI~ddD~ 116 (137)
T 3ead_A 106 IATVMILDDDH 116 (137)
T ss_dssp EEEEEEECCC-
T ss_pred EEEEEEECCCC
Confidence 45666666654
No 66
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=44.90 E-value=40 Score=21.74 Aligned_cols=26 Identities=19% Similarity=0.247 Sum_probs=18.3
Q ss_pred ceEEEEEEEEeCCCC--ceEEEEEEEee
Q psy14282 14 LIYELTLVASDSLNE--NKTTVVIHIND 39 (119)
Q Consensus 14 ~~y~l~v~a~D~~~~--~~~~v~I~V~D 39 (119)
..|.|+++|+|..+. ....|.|+|.+
T Consensus 153 G~~tl~a~A~D~aGn~s~s~~vtvtv~~ 180 (190)
T 3pdd_A 153 GNHEISVIAYDDDDAASTPDSVKIFVKQ 180 (190)
T ss_dssp EEEEEEEEEEETTCCBCCCEEEEEEEBC
T ss_pred eeEEEEEEEEECCCCEEecceEEEEECC
Confidence 568899999997554 45566676654
No 67
>1b4r_A Protein (PKD1_human); PKD domain 1 from human polycystein-1, polycystin (precursor), membrane protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=44.54 E-value=40 Score=18.74 Aligned_cols=24 Identities=13% Similarity=0.048 Sum_probs=16.4
Q ss_pred ceEEEEEEEEeCCCCceEEEEEEE
Q psy14282 14 LIYELTLVASDSLNENKTTVVIHI 37 (119)
Q Consensus 14 ~~y~l~v~a~D~~~~~~~~v~I~V 37 (119)
-.|.+++.+++++....+...|.|
T Consensus 55 G~YtV~Ltv~~g~~~~~a~~~V~V 78 (80)
T 1b4r_A 55 GRYHVTAVLALGAGSALLGTDVQV 78 (80)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEEE
T ss_pred cEEEEEEEEEeCCceEEEEEEEEE
Confidence 568888888866655555555555
No 68
>1wgo_A VPS10 domain-containing receptor sorcs2; polycystic kidney disease, PKD, structural genomics, KIAA1329 protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=44.07 E-value=27 Score=21.34 Aligned_cols=28 Identities=11% Similarity=0.382 Sum_probs=22.5
Q ss_pred CCC-ceEEEEEEEEeCCCCceEEEEEEEe
Q psy14282 11 LPT-LIYELTLVASDSLNENKTTVVIHIN 38 (119)
Q Consensus 11 rE~-~~y~l~v~a~D~~~~~~~~v~I~V~ 38 (119)
||. -.|.+++.|....+..++.+.|+|.
T Consensus 90 Y~~~GiyrVt~~AeN~~G~d~a~l~l~Vt 118 (123)
T 1wgo_A 90 YESPGIYRVSVRAENTAGHDEAVLFVQVS 118 (123)
T ss_dssp CSSCSCEEEEEEEECSSCEEEEEEEECBC
T ss_pred EeCCCEEEEEEEEEccCCceeEEEEEEEe
Confidence 566 7899999999888877888877764
No 69
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=43.73 E-value=13 Score=22.95 Aligned_cols=27 Identities=22% Similarity=0.409 Sum_probs=19.4
Q ss_pred EEEEEEeCCC--C-ceEEEEEEEeeCCCCC
Q psy14282 18 LTLVASDSLN--E-NKTTVVIHINDVNDMP 44 (119)
Q Consensus 18 l~v~a~D~~~--~-~~~~v~I~V~DvNDn~ 44 (119)
|++...|... | ..+.|++.|.|+|.||
T Consensus 50 LtvisiDk~vL~PGESA~it~IvKDid~nP 79 (146)
T 2lv4_A 50 LTVMSIDKSVLSPGESATITTIVKDIDGNP 79 (146)
T ss_dssp GCEEECCCCCBCTTCEEEEEEECBBTTSCB
T ss_pred cEEEecCccccCCCcceEEEEEEEeCCCCc
Confidence 4555566543 3 5789999999998764
No 70
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=43.31 E-value=81 Score=21.97 Aligned_cols=56 Identities=21% Similarity=0.198 Sum_probs=34.4
Q ss_pred EEEEEEEeeCCCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEECCCCCCCeEEEEEecCC
Q psy14282 31 TTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92 (119)
Q Consensus 31 ~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~D~~~~~~i~y~i~~~~ 92 (119)
...+|+|.| ||++|.|.-..-...|.|+. |...++|.-+-. ....-.+.|....+.
T Consensus 128 ~~atVtI~D-dD~agv~sf~~~~~~V~E~~----G~~~v~V~Rs~~-~~g~VtV~y~T~~GT 183 (295)
T 3us9_A 128 STATVTIFD-DDHAGIFTFEEPVTHVSESI----GIMEVKVLRTSG-ARGNVIVPYKTIEGT 183 (295)
T ss_dssp CEEEEEEEC-CCCCCEEEESCSEEEEESCS----SEEEEEEEEESC-CCSCEEEEEEEECCS
T ss_pred ceeEEEEcc-cccccccccCCCeEEEecCC----CeEEEEEEEEcC-CCccEEEEEEecCCC
Confidence 445666676 58899875544467888973 555566655432 222335778877665
No 71
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=37.13 E-value=25 Score=19.17 Aligned_cols=19 Identities=11% Similarity=0.162 Sum_probs=14.0
Q ss_pred CCcEEEeCCCceEEEcccc
Q psy14282 100 NSKFDINRTTGEIFFAPLI 118 (119)
Q Consensus 100 ~~~F~i~~~tG~i~~~~~L 118 (119)
-..|.-|+.+++|.+.+..
T Consensus 40 iKIykyde~tNeI~LkKE~ 58 (72)
T 3kvp_A 40 IKIYEYNESRNEVKLKKEY 58 (72)
T ss_dssp EEEEEEETTTTEEEEEEEE
T ss_pred EEEEEeCCCCCeEEEEEee
Confidence 4567778888888887653
No 72
>2kzw_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina mazei}
Probab=27.88 E-value=1.1e+02 Score=18.89 Aligned_cols=30 Identities=17% Similarity=0.230 Sum_probs=22.1
Q ss_pred CCC-ceEEEEEEEEeCCCCceEEEEEEEeeC
Q psy14282 11 LPT-LIYELTLVASDSLNENKTTVVIHINDV 40 (119)
Q Consensus 11 rE~-~~y~l~v~a~D~~~~~~~~v~I~V~Dv 40 (119)
|.. -.|.+++.++|..+.......+.|+.-
T Consensus 110 Y~~~G~YtVtLtvtn~~G~~~~t~~~~i~~~ 140 (145)
T 2kzw_A 110 FFNEGEYIVSLIVSNENDSDSASVTIRALEH 140 (145)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEEEEEECT
T ss_pred cCCCcEEEEEEEEEcCCCCeeEEEeeeeeec
Confidence 445 679999999988777666677777654
No 73
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=26.16 E-value=81 Score=18.46 Aligned_cols=24 Identities=21% Similarity=0.444 Sum_probs=17.9
Q ss_pred CeEEEEEecCCcCCCCCCCCcEEEeCCCceE
Q psy14282 82 NNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112 (119)
Q Consensus 82 ~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i 112 (119)
.++.|.+-..+ ...|.|.|..|.|
T Consensus 29 ~~vaFKVKtT~-------p~~y~VrP~~G~I 52 (109)
T 1row_A 29 EKIVFKIKSSN-------NNEYRIAPVFGFV 52 (109)
T ss_dssp SCEEEEEEESC-------SSSEEEECSEEEE
T ss_pred CeEEEEEEeCC-------CCceEEcCCceEE
Confidence 45788887653 6788888888866
No 74
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=24.79 E-value=1.4e+02 Score=20.32 Aligned_cols=66 Identities=15% Similarity=0.152 Sum_probs=39.5
Q ss_pred CCCC-ceEEEEEEEEeCCCC-ceEEEEEEEeeCCCCCC--eecC---CCccEE----------EeCCCCCCCCcEEEEEE
Q psy14282 10 NLPT-LIYELTLVASDSLNE-NKTTVVIHINDVNDMPP--VFNT---SLYPAI----------MEEELPGPYPHSLLKVL 72 (119)
Q Consensus 10 DrE~-~~y~l~v~a~D~~~~-~~~~v~I~V~DvNDn~P--~f~~---~~y~~~----------v~E~~~~~~g~~v~~v~ 72 (119)
-|.+ -.|.+++.++|..+. .+....|.|....-++- .|.. ..|.-. -++.. ..|..-.++.
T Consensus 64 tY~~~GtYtVtLTVtD~~G~s~t~t~~ItV~~~~a~~~tv~Ftd~s~~~~~Wdfgdg~~s~~~~~~y~--~~G~YtV~Lt 141 (260)
T 2c4x_A 64 KYKNPGTYKVKLIVTDNQGASSSFTATIKVTSATGDNSKFNFEDGTLGGFTTSGTNATGVVVNTTEKA--FKGERGLKWT 141 (260)
T ss_dssp CCSSCEEEEEEEEEEETTSCEEEEEEEEEEBCSSSCCSSBCCTTSSCTTCEEEEEEEEEEEEEESSCC--SSSSCEEEEE
T ss_pred EeCCCEEEEEEEEEEeCCCCeEEEEEEEEECCCCCcceeEEEeCCCCcceEEECCCCCCcccccceee--CCceEEEEEE
Confidence 3556 789999999998654 56777888876532111 2221 122211 12232 4577778888
Q ss_pred EEECC
Q psy14282 73 ATDGD 77 (119)
Q Consensus 73 A~D~D 77 (119)
++|.+
T Consensus 142 Vtn~~ 146 (260)
T 2c4x_A 142 VTSEG 146 (260)
T ss_dssp EEEEE
T ss_pred EECCC
Confidence 88876
No 75
>2qvk_A CBD2, sodium/calcium exchanger 1; calcium binding domain, metal binding protein; 1.45A {Canis lupus familiaris} PDB: 2qvm_A 2fwu_A 2kls_A
Probab=23.84 E-value=1.6e+02 Score=19.27 Aligned_cols=47 Identities=17% Similarity=0.092 Sum_probs=29.2
Q ss_pred CCCCCeecCCCccEEEeCCCCCCCCcEEEEEEEEECCCCCCCeEEEEEecCC
Q psy14282 41 NDMPPVFNTSLYPAIMEEELPGPYPHSLLKVLATDGDKDRQNNIVYFLTGQG 92 (119)
Q Consensus 41 NDn~P~f~~~~y~~~v~E~~~~~~g~~v~~v~A~D~D~~~~~~i~y~i~~~~ 92 (119)
+|++..|.-..-...|.|+. |...++|.-+.. ......+.|.-..+.
T Consensus 2 DD~~Gv~sF~~~~y~V~E~~----G~v~vtV~R~gg-~~g~VsV~y~T~dGT 48 (192)
T 2qvk_A 2 PGHAGIFTFEEPVTHVSESI----GIMEVKVLRTSG-ARGNVIVPYKTIEGT 48 (192)
T ss_dssp --CCCEEEESCSEEEEETTC----CEEEEEEEEESC-CCSCEEEEEEEEESS
T ss_pred CCCceEEEEcCCeEEEEcCc----eEEEEEEEEeCC-CCceEEEEEEeeCCc
Confidence 56777776666677889973 666666655533 222345788887775
No 76
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=23.01 E-value=1.1e+02 Score=18.30 Aligned_cols=24 Identities=8% Similarity=0.343 Sum_probs=17.9
Q ss_pred CeEEEEEecCCcCCCCCCCCcEEEeCCCceE
Q psy14282 82 NNIVYFLTGQGIDADNPGNSKFDINRTTGEI 112 (119)
Q Consensus 82 ~~i~y~i~~~~~~~~~~~~~~F~i~~~tG~i 112 (119)
.++.|.+-..+ ...|.|.|..|.|
T Consensus 37 ~~vAFKVKtT~-------p~~YrVrP~~G~I 60 (116)
T 1m1s_A 37 SRLAFKVKSSN-------NEHYRVRPVYGFV 60 (116)
T ss_dssp SEEEEEEEESC-------TTTEEEECSEEEE
T ss_pred CeEEEEEEecC-------CCceEEcCCceEE
Confidence 46888887653 5788888888866
No 77
>2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.25 E-value=47 Score=19.95 Aligned_cols=24 Identities=13% Similarity=0.205 Sum_probs=12.3
Q ss_pred eEEEEEEEEeCCCCceEEEEEEEe
Q psy14282 15 IYELTLVASDSLNENKTTVVIHIN 38 (119)
Q Consensus 15 ~y~l~v~a~D~~~~~~~~v~I~V~ 38 (119)
.|.|.+.++|..+.....+.|+|.
T Consensus 81 ~Y~FqltVtd~~~~ge~~vnVTV~ 104 (113)
T 2e7m_A 81 LYVFKVTVSSENAFGEGFVNVTVK 104 (113)
T ss_dssp EEEECCEEEETTEEEECCEEEEEE
T ss_pred EEEEEEEEECCCCCccceEEEEEc
Confidence 466666666665433333444443
Done!