BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14285
(443 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9EQW7|KI13A_MOUSE Kinesin-like protein KIF13A OS=Mus musculus GN=Kif13a PE=1 SV=1
Length = 1749
Score = 294 bits (753), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 152/292 (52%), Positives = 197/292 (67%), Gaps = 56/292 (19%)
Query: 155 VDILELNDAGDYTPVEVTPSRAPDMLTGGTYQLRQGQQRRIQVLVRPVTNSGTLPIICES 214
+ ILELN+ GDY VE+ +A D+ TGG +QLRQG RR+QV V+PV +SGTLP++ E+
Sbjct: 993 ISILELNELGDYAAVEL--HQAKDVNTGGVFQLRQGHSRRVQVTVKPVQHSGTLPLMVEA 1050
Query: 215 VGSIAVGSVCLRS-RLQKPLDSYQEEDLAVLREKWSDALVRRRQYLDQQIQRLINKQDKS 273
+ S+++G V RS +LQ+ LDSYQEEDL +RE+WSDAL++RR+YLD+QI+++ NK++K+
Sbjct: 1051 ILSVSIGCVTARSTKLQRGLDSYQEEDLNCVRERWSDALIKRREYLDEQIKKVSNKKEKT 1110
Query: 274 EQDIEREQSLEEQWVNLTEERNAVLVPAPGSGIPGAPADWNPPSDKSEQDIEREQSLVEQ 333
E D+ERE L EQWV LTEERNAVLVPAPGSGIPGAPADW P
Sbjct: 1111 EDDMEREARLVEQWVGLTEERNAVLVPAPGSGIPGAPADWVP------------------ 1152
Query: 334 WVNLTEERNAVLVPAPGSGIPGAPADWNPPSGMEPHIPVLFLDLNADDLSASNS--GPEL 391
P GME HIPVLFLDLNADDLSA+ GP
Sbjct: 1153 -----------------------------PPGMETHIPVLFLDLNADDLSANEQLVGPH- 1182
Query: 392 DYPVAGLHSILPKEHGTKFYNLPLVRHLNQEVGAVATWDSSVHDSQHLNKIT 443
+G++SILPKEHG++F+ LP+++H + EV A A+WDSSVHDS HLN++T
Sbjct: 1183 ---ASGVNSILPKEHGSQFFYLPIIKHSDDEVSATASWDSSVHDSLHLNRVT 1231
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 44/57 (77%)
Query: 1 MFRRSLGQLKEDIVRANAFVQEANFLAEEMGRQTKFSVTLQIPPANLSPNRRWNCVI 57
+FR+SL +L+E +V+AN V+EANFLAEEM + T + VTLQIP ANLS NR+ ++
Sbjct: 670 LFRQSLAKLREQLVKANTLVREANFLAEEMSKLTDYQVTLQIPAANLSANRKRGAIV 726
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 24/28 (85%)
Query: 73 WSELTRKIELWVDILELNDAGDYTPVEV 100
W+E+TR+IE+W+ ILELN+ GDY VE+
Sbjct: 982 WNEVTRRIEVWISILELNELGDYAAVEL 1009
>sp|Q9H1H9|KI13A_HUMAN Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF13A PE=1 SV=2
Length = 1805
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 151/305 (49%), Positives = 196/305 (64%), Gaps = 69/305 (22%)
Query: 155 VDILELNDAGDYTPVEVTPSRAPDMLTGGTYQLRQGQQRRIQVLVRPVTNSGTLPIICES 214
+ ILELN+ G+Y VE+ +A D+ TGG +QLRQG RR+QV V+PV +SGTLP++ E+
Sbjct: 993 ISILELNELGEYAAVEL--HQAKDVNTGGIFQLRQGHSRRVQVTVKPVQHSGTLPLMVEA 1050
Query: 215 VGSIAVGSVCLRS-RLQKPLDSYQ-------------EEDLAVLREKWSDALVRRRQYLD 260
+ S+++G V RS +LQ+ LDSYQ EEDL +RE+WSDAL++RR+YLD
Sbjct: 1051 ILSVSIGCVTARSTKLQRGLDSYQRDDEDGDDMDSYQEEDLNCVRERWSDALIKRREYLD 1110
Query: 261 QQIQRLINKQDKSEQDIEREQSLEEQWVNLTEERNAVLVPAPGSGIPGAPADWNPPSDKS 320
+QI+++ NK +K+E D+ERE L EQWV LTEERNAVLVPAPGSGIPGAPADW PP
Sbjct: 1111 EQIKKVSNKTEKTEDDVEREAQLVEQWVGLTEERNAVLVPAPGSGIPGAPADWIPP---- 1166
Query: 321 EQDIEREQSLVEQWVNLTEERNAVLVPAPGSGIPGAPADWNPPSGMEPHIPVLFLDLNAD 380
GME HIPVLFLDLNAD
Sbjct: 1167 -------------------------------------------PGMETHIPVLFLDLNAD 1183
Query: 381 DLSASNS--GPELDYPVAGLHSILPKEHGTKFYNLPLVRHLNQEVGAVATWDSSVHDSQH 438
DLSA+ GP +G++SILPKEHG++F+ LP+++H + EV A A+WDSSVHDS H
Sbjct: 1184 DLSANEQLVGPH----ASGVNSILPKEHGSQFFYLPIIKHSDDEVSATASWDSSVHDSVH 1239
Query: 439 LNKIT 443
LN++T
Sbjct: 1240 LNRVT 1244
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 44/57 (77%)
Query: 1 MFRRSLGQLKEDIVRANAFVQEANFLAEEMGRQTKFSVTLQIPPANLSPNRRWNCVI 57
+FR+SL +L+E +V+AN V+EANFLAEEM + T + VTLQIP ANLS NR+ ++
Sbjct: 670 LFRQSLAKLREQLVKANTLVREANFLAEEMSKLTDYQVTLQIPAANLSANRKRGAIV 726
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 73 WSELTRKIELWVDILELNDAGDYTPVEV 100
W+E+TR+IE+W+ ILELN+ G+Y VE+
Sbjct: 982 WNEVTRRIEMWISILELNELGEYAAVEL 1009
>sp|Q9NQT8|KI13B_HUMAN Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF13B PE=1 SV=1
Length = 1826
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 173/302 (57%), Gaps = 66/302 (21%)
Query: 155 VDILELNDAGDYTPVEVTPSRAPDMLTGGTYQLRQGQQRRIQVLVRPVTNSGTLPIICES 214
V ILE N+ G+Y PVEV ++ D+ TGG +QLRQGQ RR+QV V+ V SGTLP++ E
Sbjct: 993 VQILEQNENGEYCPVEVISAK--DVPTGGIFQLRQGQSRRVQVEVKSVQESGTLPLMEEC 1050
Query: 215 VGSIAVGSVCLRSRLQKP------------LDSYQEEDLAVLREKWSDALVRRRQYLDQQ 262
+ S+ +G V +R L+ P +DSYQ+ DL LR KW +AL +R++YLDQQ
Sbjct: 1051 ILSVGIGCVKVRP-LRAPRTHETFHEEEEDMDSYQDRDLERLRRKWLNALTKRQEYLDQQ 1109
Query: 263 IQRLINKQDKSEQDIEREQSLEEQWVNLTEERNAVLVPAPGSGIPGAPADWNPPSDKSEQ 322
+Q+L++K+D K+E
Sbjct: 1110 LQKLVSKRD-----------------------------------------------KTED 1122
Query: 323 DIEREQSLVEQWVNLTEERNAVLVPAPGSGIPGAPADWNPPSGMEPHIPVLFLDLNADDL 382
D +RE L+E + LTEERNAV+VP+ GSGIPGAPA+W P GME HIPV+FLDLNADD
Sbjct: 1123 DADREAQLLEMRLTLTEERNAVMVPSAGSGIPGAPAEWTPVPGMETHIPVIFLDLNADDF 1182
Query: 383 SASNSGPELDYPVA-GLHSILPKEHGTKFYNLPLVRHLNQEVGAVATWDSSVHDSQHLNK 441
S+ ++ LD P A G + L E +F+ L +V+ + EV A A+WDS+VH L++
Sbjct: 1183 SSQDN---LDDPEAGGWDATLTGEEEEEFFELQIVKQHDGEVKAEASWDSAVHGCPQLSR 1239
Query: 442 IT 443
T
Sbjct: 1240 GT 1241
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 41/53 (77%)
Query: 5 SLGQLKEDIVRANAFVQEANFLAEEMGRQTKFSVTLQIPPANLSPNRRWNCVI 57
SL +L+E IV+AN V+EAN++AEE+ ++T++ VTLQIP ++L NR+ ++
Sbjct: 682 SLMRLREQIVKANLLVREANYIAEELDKRTEYKVTLQIPASSLDANRKRGSLL 734
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 25/32 (78%)
Query: 73 WSELTRKIELWVDILELNDAGDYTPVEVTPSR 104
WSE+TRK+E WV ILE N+ G+Y PVEV ++
Sbjct: 982 WSEVTRKLEFWVQILEQNENGEYCPVEVISAK 1013
>sp|Q02873|YP107_YEAST UPF0651 protein YPL107W, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YPL107W PE=1 SV=1
Length = 248
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Query: 357 PADWNPPSGMEPHIPVLFLDLNADDLSASNSGPELDYPVAGLHSILPKEHG--------T 408
P DWNPP G+ H+ + ++L L + E + ++ + S+ PK G
Sbjct: 125 PKDWNPPLGL-LHMENVPVELREKKLETDSKKAEQPHDLSAIRSLFPKRKGPLPKSVLAA 183
Query: 409 KFYNLPLVRHLNQEVGAVATWDSSVHDS 436
K N+ L + Q+ G D SV +S
Sbjct: 184 KRKNIALRHNYEQKDGG----DQSVSES 207
>sp|P23678|UN104_CAEEL Kinesin-like protein unc-104 OS=Caenorhabditis elegans GN=unc-104
PE=2 SV=3
Length = 1584
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 82 LWVDILELNDAGDYTPVEV-----TPSRAPDMLTQIII--LNVTLCYVNKTVGGHPRVER 134
+W +I EL + G+Y P V P+ +L Q I + +T+C+ G + +
Sbjct: 1057 VWFEICELANNGEYVPTIVDHAQGLPTHGIFLLHQGIQRRIKITICHEK----GELKWKD 1112
Query: 135 CRGLHAGRSHSLPRARHADGVDILEL 160
C+ L GR + P D VD+L L
Sbjct: 1113 CQELVVGRIRAGPEWAGGDDVDVLSL 1138
>sp|Q67704|RDRP_GVAIS RNA replication protein OS=Grapevine virus A (isolate Is 151)
GN=ORF1 PE=3 SV=1
Length = 1707
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 249 SDALVRRRQYLDQQIQRLINKQDKSEQDIEREQSLEEQWVNLTEERNAVLVPAPGSGIPG 308
S AL+ RQYL ++ R + ++ +DIE Q+ E+ V EE L+P I
Sbjct: 509 SRALIHFRQYL-IKLGRFSFMESRAIKDIEDIQAGLEEGVITEEEAELRLLPTTKPKITE 567
Query: 309 APADWNPPSDKSEQDIEREQSL 330
D + P E D+E+ +S+
Sbjct: 568 IHMDDDTPGTSGESDVEKFKSV 589
>sp|Q82UP3|ARGD_NITEU Acetylornithine aminotransferase OS=Nitrosomonas europaea (strain
ATCC 19718 / NBRC 14298) GN=argD PE=3 SV=1
Length = 393
Score = 32.7 bits (73), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 67 TIPSCTWSELTRKIELWVDILELNDAGDYTPVEV---TPSRAPDMLTQIIILNVT 118
TI + W E R+++ W D+L++ G +E+ P+ L + +++NVT
Sbjct: 301 TIGNFMWEEFGRRLQAWQDVLKIRGQGMMIGIELPVPCSELVPEALKRRVLVNVT 355
>sp|Q5V4K3|HIS8_HALMA Histidinol-phosphate aminotransferase OS=Haloarcula marismortui
(strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)
GN=hisC PE=3 SV=1
Length = 360
Score = 32.7 bits (73), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 132 VERCRGLHAGRSHSLPRARHADGVDILELNDAGDYTPVEVTPSRAPD 178
VE RG A R HS P+A HAD VD EL D D TP +V S D
Sbjct: 49 VEAIRG-SAERMHSYPKASHADLVD--ELADMWDVTPEQVWLSNGGD 92
>sp|Q54T01|Y2105_DICDI Probable protein phosphatase DDB_G0282105 OS=Dictyostelium
discoideum GN=DDB_G0282105 PE=3 SV=1
Length = 958
Score = 32.3 bits (72), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Query: 228 RLQKPLDSYQEEDLAVLREKW------SDALVRRRQYLDQQIQRLINKQDKSEQDIEREQ 281
+LQK L S Q++ + L++++ S+ L Q L+ QIQ+L+ KQ+K +Q +E+++
Sbjct: 265 QLQKKL-SDQKDQYSTLKKEFDEKVKKSNKLENSIQSLESQIQKLLQKQEKEKQKLEKDK 323
Query: 282 SLE 284
E
Sbjct: 324 ERE 326
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 177,692,699
Number of Sequences: 539616
Number of extensions: 8027995
Number of successful extensions: 23758
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 23626
Number of HSP's gapped (non-prelim): 174
length of query: 443
length of database: 191,569,459
effective HSP length: 121
effective length of query: 322
effective length of database: 126,275,923
effective search space: 40660847206
effective search space used: 40660847206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)