Query psy14290
Match_columns 332
No_of_seqs 227 out of 746
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 16:05:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14290.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14290hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pvl_A Myosin VIIA isoform 1; 100.0 4.7E-41 1.6E-45 346.0 11.1 291 13-325 178-515 (655)
2 1ef1_A Moesin; membrane, FERM 100.0 7.5E-39 2.6E-43 300.5 20.6 222 96-329 6-238 (294)
3 1h4r_A Merlin; FERM, neurofibr 100.0 7.2E-38 2.5E-42 296.6 20.0 221 96-329 27-258 (314)
4 3qij_A Protein 4.1; cytoskelet 100.0 4.1E-37 1.4E-41 289.6 19.4 210 96-322 22-236 (296)
5 2i1j_A Moesin; FERM, coiled-co 100.0 1.9E-36 6.4E-41 307.7 20.4 222 96-329 9-241 (575)
6 3ivf_A Talin-1; FERM domain, c 100.0 5.8E-36 2E-40 289.9 20.5 228 96-331 90-325 (371)
7 4dxa_B KREV interaction trappe 100.0 3.3E-36 1.1E-40 286.4 14.4 229 96-331 10-270 (322)
8 3au4_A Myosin-X; protein-prote 100.0 1E-34 3.5E-39 294.8 17.7 273 47-330 158-493 (555)
9 2al6_A Focal adhesion kinase 1 100.0 1.9E-32 6.4E-37 265.7 18.4 232 96-330 12-266 (375)
10 1mix_A Talin; focal adhesion, 100.0 2.1E-31 7E-36 237.2 14.2 146 180-330 11-159 (206)
11 4f7g_A Talin-1; alpha-helix bu 100.0 5.4E-31 1.8E-35 237.9 15.6 146 180-330 22-170 (222)
12 4eku_A Protein-tyrosine kinase 99.9 2.5E-27 8.7E-32 230.5 17.6 231 97-331 33-286 (392)
13 2j0j_A Focal adhesion kinase 1 99.8 8.6E-20 2.9E-24 188.5 17.0 215 103-320 23-256 (656)
14 3pvl_A Myosin VIIA isoform 1; 98.6 7.8E-08 2.7E-12 99.0 8.2 120 38-161 470-606 (655)
15 1hbk_A ACBP, acyl-COA binding 97.6 0.00024 8.1E-09 54.3 8.3 82 190-288 5-89 (89)
16 3epy_A Acyl-COA-binding domain 97.5 0.00017 5.9E-09 55.1 6.5 84 187-287 4-88 (89)
17 2cb8_A Acyl-COA-binding protei 97.4 0.00022 7.7E-09 54.2 6.0 80 191-287 6-86 (87)
18 1st7_A ACBP, acyl-COA-binding 97.4 0.00015 5.1E-09 55.1 4.8 80 191-287 5-85 (86)
19 2cop_A Acyl-coenzyme A binding 97.3 0.00086 3E-08 53.1 8.1 85 189-290 10-95 (109)
20 2lbb_A Acyl COA binding protei 97.2 0.00024 8.3E-09 55.0 3.9 81 190-287 13-95 (96)
21 2wh5_A Acyl-COA-binding domain 97.0 0.0018 6E-08 51.0 7.1 76 190-282 11-90 (106)
22 3flv_A Acyl-COA-binding domain 97.0 0.0017 6E-08 52.0 7.0 80 186-282 23-106 (119)
23 2cqu_A Peroxisomal D3,D2-enoyl 96.9 0.002 6.9E-08 51.5 6.8 85 188-289 17-102 (116)
24 3fp5_A Acyl-COA binding protei 96.8 0.0031 1.1E-07 49.6 7.0 76 190-282 7-86 (106)
25 2kc2_A Talin-1, F1; FERM, adhe 91.1 0.31 1.1E-05 39.4 5.3 43 96-138 16-60 (128)
26 1ntv_A Disabled homolog 1; bet 62.5 8.2 0.00028 31.5 4.4 29 302-330 60-88 (152)
27 2cy5_A Epidermal growth factor 60.5 11 0.00036 30.8 4.6 35 297-331 43-77 (140)
28 1p3r_A Disabled homolog 2; PTB 54.9 11 0.00039 31.0 4.0 28 303-330 60-87 (160)
29 3so6_A LDL receptor adaptor pr 53.8 12 0.00042 29.5 4.0 29 302-330 43-71 (137)
30 2ej8_A DCC-interacting protein 53.8 13 0.00045 30.6 4.3 28 303-330 57-84 (160)
31 1aqc_A X11; PTB domain; 2.30A 49.4 15 0.0005 30.7 3.9 28 303-330 64-91 (172)
32 2ela_A Adapter protein contain 47.8 16 0.00056 30.6 4.0 28 303-330 70-97 (175)
33 2eyx_A V-CRK sarcoma virus CT1 46.6 19 0.00066 24.6 3.6 39 127-165 4-43 (67)
34 3f0w_A NUMB-R, NUMB-like prote 45.4 18 0.00062 29.9 3.9 29 302-330 77-105 (168)
35 4dbb_A Amyloid beta A4 precurs 44.5 20 0.00069 29.5 4.0 28 303-330 53-80 (162)
36 2dbk_A CRK-like protein; struc 38.8 30 0.001 25.0 3.8 39 127-165 14-53 (88)
37 2vkn_A Protein SSU81; membrane 36.8 30 0.001 23.7 3.3 35 131-165 7-41 (70)
38 1uti_A GRB2-related adaptor pr 36.7 28 0.00095 22.8 3.0 33 131-165 3-36 (58)
39 1n3h_A SHC transforming protei 36.4 22 0.00076 30.6 3.1 28 303-330 120-147 (207)
40 2ew3_A SH3-containing GRB2-lik 35.4 31 0.001 23.7 3.2 35 129-165 3-38 (68)
41 2i0n_A Class VII unconventiona 35.3 29 0.00098 24.6 3.1 30 127-158 8-37 (80)
42 3d8d_A Amyloid beta A4 precurs 34.4 41 0.0014 27.5 4.2 29 303-331 55-83 (148)
43 2ak5_A RHO guanine nucleotide 32.9 36 0.0012 22.7 3.1 36 128-165 5-41 (64)
44 2iim_A Proto-oncogene tyrosine 32.9 35 0.0012 22.7 3.1 35 129-165 6-40 (62)
45 1uj0_A Signal transducing adap 32.7 39 0.0013 22.5 3.3 29 128-158 4-32 (62)
46 2nwm_A Vinexin; cell adhesion; 32.0 37 0.0013 23.1 3.1 33 131-165 3-36 (65)
47 1zx6_A YPR154WP; SH3 domain, p 31.5 41 0.0014 21.9 3.2 27 130-158 3-29 (58)
48 2dlp_A KIAA1783 protein; SH3 d 31.5 27 0.00093 25.0 2.5 31 127-159 6-36 (85)
49 3rnj_A Brain-specific angiogen 31.2 31 0.0011 23.4 2.6 31 128-159 6-36 (67)
50 1ue9_A Intersectin 2; beta bar 30.8 43 0.0015 23.5 3.4 37 127-165 5-42 (80)
51 1tg0_A BBC1 protein, myosin ta 30.3 41 0.0014 22.8 3.1 34 130-165 8-42 (68)
52 2oaw_A Spectrin alpha chain, b 29.6 48 0.0016 22.0 3.4 33 131-165 3-36 (65)
53 2jte_A CD2-associated protein; 29.5 48 0.0016 22.1 3.3 30 128-159 5-34 (64)
54 1w70_A Neutrophil cytosol fact 29.4 43 0.0015 22.0 3.1 35 129-165 4-39 (60)
55 1g2b_A Spectrin alpha chain; c 29.0 47 0.0016 22.1 3.2 35 129-165 21-56 (62)
56 1cka_A C-CRK N-terminal SH3 do 28.9 44 0.0015 21.6 3.0 33 131-165 3-36 (57)
57 1b07_A Protein (proto-oncogene 28.8 43 0.0015 22.7 3.0 34 130-165 4-38 (65)
58 1sem_A SEM-5; SRC-homology 3 ( 28.1 46 0.0016 21.6 3.0 28 130-159 3-30 (58)
59 1jo8_A ABP1P, actin binding pr 27.7 43 0.0015 21.8 2.8 32 132-165 3-35 (58)
60 2g6f_X RHO guanine nucleotide 27.7 44 0.0015 21.8 2.9 34 130-165 5-39 (59)
61 2fpe_A C-JUN-amino-terminal ki 27.6 46 0.0016 22.0 3.0 34 130-165 4-38 (62)
62 2djq_A SH3 domain containing r 27.6 48 0.0016 22.4 3.1 35 129-165 7-42 (68)
63 2bzy_A CRK-like protein, CRKL 27.2 42 0.0014 22.7 2.7 35 131-165 3-38 (67)
64 2xmf_A Myosin 1E SH3; motor pr 27.2 49 0.0017 21.7 3.0 35 129-165 5-40 (60)
65 2vwf_A Growth factor receptor- 27.1 50 0.0017 21.4 3.0 27 131-159 4-30 (58)
66 4dxa_B KREV interaction trappe 27.1 1E+02 0.0035 27.8 6.2 87 38-129 216-319 (322)
67 2pqh_A Spectrin alpha chain, b 26.8 55 0.0019 23.0 3.4 34 130-165 3-37 (80)
68 2bz8_A SH3-domain kinase bindi 26.8 45 0.0015 21.7 2.7 32 132-165 4-36 (58)
69 1k4u_S Phagocyte NADPH oxidase 26.8 37 0.0013 22.5 2.3 29 128-158 4-32 (62)
70 1y0m_A 1-phosphatidylinositol- 26.7 46 0.0016 22.0 2.8 33 131-165 5-38 (61)
71 2o9s_A Ponsin; SH3 domain, sig 26.6 54 0.0018 22.1 3.2 28 129-158 6-33 (67)
72 2kxc_A Brain-specific angiogen 25.9 36 0.0012 23.0 2.2 33 126-159 3-35 (67)
73 3ulr_B SRC substrate cortactin 25.5 56 0.0019 21.7 3.1 37 127-165 7-44 (65)
74 2d8j_A FYN-related kinase; SH3 25.4 49 0.0017 22.9 2.9 35 129-165 7-42 (77)
75 3c0c_A Endophilin-A2; endocyto 25.3 56 0.0019 22.5 3.1 29 128-158 12-40 (73)
76 2dl4_A Protein STAC; SH3 domai 25.1 55 0.0019 22.1 3.0 30 128-159 6-35 (68)
77 2b86_A Cytoplasmic protein NCK 24.9 51 0.0017 22.6 2.8 35 129-165 4-38 (67)
78 2ed0_A ABL interactor 2; coile 24.8 68 0.0023 22.4 3.6 35 129-165 17-52 (78)
79 2ebp_A SAM and SH3 domain-cont 24.8 76 0.0026 21.9 3.8 36 130-165 10-46 (73)
80 2lj0_A Sorbin and SH3 domain-c 24.6 49 0.0017 22.7 2.7 32 132-165 9-41 (65)
81 2fpf_A C-JUN-amino-terminal ki 24.3 56 0.0019 22.3 3.0 36 128-165 5-41 (71)
82 2drm_A Acanthamoeba myosin IB; 24.1 64 0.0022 20.8 3.1 34 130-165 4-38 (58)
83 2k9g_A SH3 domain-containing k 23.9 69 0.0024 21.9 3.4 30 128-159 8-37 (73)
84 2k2m_A EPS8-like protein 1; al 23.6 63 0.0021 21.9 3.1 35 129-165 8-42 (68)
85 2ed1_A 130 kDa phosphatidylino 23.5 58 0.002 22.6 2.9 36 128-165 9-45 (76)
86 2dmo_A Neutrophil cytosol fact 23.4 64 0.0022 21.8 3.1 35 129-165 7-42 (68)
87 3dxe_A Amyloid beta A4 protein 23.2 73 0.0025 25.6 3.8 26 303-328 46-71 (140)
88 4e6r_A Cytoplasmic protein NCK 23.1 64 0.0022 20.7 2.9 33 131-165 3-36 (58)
89 2ke9_A Caskin-2; SH3 domain, A 23.0 58 0.002 23.3 2.9 35 129-165 18-54 (83)
90 1x2k_A OSTF1, osteoclast stimu 23.0 71 0.0024 21.5 3.3 29 128-158 6-34 (68)
91 2fei_A CD2-associated protein; 22.9 41 0.0014 22.8 2.0 27 131-159 3-29 (65)
92 4glm_A Dynamin-binding protein 22.8 61 0.0021 21.9 2.9 35 129-165 13-48 (72)
93 2m0y_A Dedicator of cytokinesi 22.3 55 0.0019 22.4 2.6 36 128-165 10-45 (74)
94 1oot_A Hypothetical 40.4 kDa p 22.2 69 0.0023 20.9 3.0 28 130-159 4-31 (60)
95 4fxe_A Antitoxin RELB; toxin/a 22.1 1.4E+02 0.0046 21.5 4.7 33 252-285 11-46 (79)
96 1neg_A Spectrin alpha chain, b 21.8 65 0.0022 23.1 3.0 36 128-165 16-52 (83)
97 1gl5_A Tyrosine-protein kinase 21.8 72 0.0025 21.4 3.1 33 131-165 4-37 (67)
98 1x2q_A Signal transducing adap 21.7 67 0.0023 23.0 3.0 35 129-165 17-52 (88)
99 1zlm_A Osteoclast stimulating 21.7 56 0.0019 21.2 2.4 34 130-165 4-38 (58)
100 2da9_A SH3-domain kinase bindi 21.7 74 0.0025 21.5 3.2 29 129-159 7-35 (70)
101 2cre_A HEF-like protein; SH3 d 21.5 67 0.0023 21.7 2.9 29 129-159 7-35 (71)
102 2dl3_A Sorbin and SH3 domain-c 21.5 77 0.0026 21.2 3.2 29 129-159 7-35 (68)
103 3h0h_A Proto-oncogene tyrosine 21.1 72 0.0025 21.7 3.0 35 129-165 15-50 (73)
104 2ysq_A RHO guanine nucleotide 21.1 71 0.0024 22.4 3.0 36 128-165 9-45 (81)
105 4esr_A Jouberin; AHI-1, AHI1, 21.1 72 0.0025 21.5 3.0 34 130-165 7-41 (69)
106 2yun_A Nostrin; nitric oxide s 20.8 72 0.0025 22.2 3.0 34 130-165 8-42 (79)
107 2gnc_A SLIT-ROBO RHO GTPase-ac 20.8 56 0.0019 21.5 2.3 28 129-158 6-33 (60)
108 3cqt_A P59-FYN, proto-oncogene 20.7 65 0.0022 22.7 2.7 35 129-165 5-40 (79)
109 1yn8_A NBP2, NAP1-binding prot 20.6 67 0.0023 20.8 2.6 26 131-158 3-28 (59)
110 2yuo_A CIP85, RUN and TBC1 dom 20.6 77 0.0026 22.0 3.1 35 129-165 7-42 (78)
111 3thk_A Spectrin alpha chain, b 20.4 84 0.0029 21.3 3.3 34 130-165 6-40 (73)
112 2cud_A SRC-like-adapter; SH3 d 20.4 52 0.0018 23.2 2.1 35 129-165 17-51 (79)
113 2v1q_A SLA1, cytoskeleton asse 20.4 87 0.003 20.3 3.2 28 130-159 3-30 (60)
114 1wxb_A Epidermal growth factor 20.3 60 0.002 22.0 2.4 35 129-165 7-41 (68)
115 3ngp_A Spectrin alpha chain, b 20.2 90 0.0031 20.3 3.3 34 130-165 7-41 (62)
No 1
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=100.00 E-value=4.7e-41 Score=346.04 Aligned_cols=291 Identities=22% Similarity=0.371 Sum_probs=224.3
Q ss_pred hhhhC----ChHHHHHHhccc-----eeEEEecchhhhccccCCCccccceeeeecCCcccccceecc-ccccccccc--
Q psy14290 13 FAQHC----SKTEREVLARGF-----QLVVFLHEEAWTNHRSTGKDRTADLIFHFHPGIAQVTASYHK-CSRKRLQVS-- 80 (332)
Q Consensus 13 ~~~~~----~~~~~~~~~~~~-----~~~v~~~~~~w~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~-- 80 (332)
|||.| .|.......++| |..+|+ ||++|.+||..+.+..+ .+|++ |..+ |+++
T Consensus 178 ycQl~kQ~t~np~~~s~~rgW~Ll~l~~~~f~-----------Ps~~~~~yl~~~l~~~~---~~~a~~c~~~-L~rt~~ 242 (655)
T 3pvl_A 178 YCQISKQLTHNPSKSSYARGWILVSLCVGCFA-----------PSEKFVKYLRNFIHGGP---PGYAPYCEER-LRRTFV 242 (655)
T ss_dssp HHHHHHHTSSCCCHHHHHHHHHHHHHHHHHCC-----------CCTTTHHHHHHHHHTSC---TTTHHHHHHH-HHHHHH
T ss_pred HHHHHHHhhcCCChHHHHHHHHHHHHHHhhcC-----------CcHHHHHHHHHHHHcCc---HHHHHHHHHH-HHHhhc
Confidence 66766 333345566666 444443 56666666766666555 57877 7776 4444
Q ss_pred ------cceeEEeccCCccce----eeeecCCeEEEEcCChhhHHHHHHHHHH--hhcccceeEEEEeecCCCCCCCeee
Q psy14290 81 ------APLVIECASGESKQE----HRPIPGEEFTFQSPNAEDIRDLVVYFLE--GLKKRSSFVIALQDYKAPGEGSSFL 148 (332)
Q Consensus 81 ------~~~~~~~~~~~~~~~----~~tl~g~~~~l~~~~a~~~~elV~~~l~--gL~e~s~f~lal~d~~~~~d~~~~L 148 (332)
.|..+|+++..+..+ |.+|||..+++..++.+++.|+++.+++ ||++..+|++.+.+... ...++
T Consensus 243 ~g~R~~~Ps~~Ei~Ai~~~~~i~~~V~llDgt~~~~~vds~Tt~~ell~~V~~~LgL~e~~~FgL~~~~~dk---~~sll 319 (655)
T 3pvl_A 243 NGTRTQPPSWLELQATKSKKPIMLPVTFMDGTTKTLLTDSATTARELCNALADKISLKDRFGFSLYIALFDK---VSSLG 319 (655)
T ss_dssp HCCCSSCCCHHHHHHHHHTCCEEEEEEETTSCEEEEEECTTCBHHHHHHHHHHHTTCSSCTTEEEEEEETTE---EEEEE
T ss_pred CCCCCcCCCHHHHHHHHcCCceEEEEEecCCceEEEEEccCCcHHHHHHHHHHHcCCcccccceeEEecCCc---eeecc
Confidence 355577765444443 8899999999998888788888777776 56788888877654321 01111
Q ss_pred eccCCceEEe------e---------cCCCceEEEEEEEeccccCCCCCCchhhhhhHhhhhhchhccccccCHH-HHHH
Q psy14290 149 SFHRGDLILL------E---------EGSTGETVFFMKKLWTNTVPGKDRNADLIFHFHQELPKLLRGYHKCSKE-EAAK 212 (332)
Q Consensus 149 ~~~kgd~iiL------e---------q~~~~~~L~Frrk~w~~~~~~~~d~~~~~l~y~Qv~~dil~G~~~~~~e-~a~~ 212 (332)
+++..++ + ....+++|+||+++|.++.+..+|+++++|+|.|+++||+.|+|||+.| ++++
T Consensus 320 ---~~~e~vlD~l~~~E~~~k~~~~~~~~~~~~L~FRvkff~p~~~~~~d~it~~LlYlQ~k~dIl~Grlpc~~E~~a~~ 396 (655)
T 3pvl_A 320 ---SGSDHVMDAISQCEQYAKEQGAQERNAPWRLFFRKEVFTPWHNPSEDNVATNLIYQQVVRGVKFGEYRCEKEDDLAE 396 (655)
T ss_dssp ---TSSCBHHHHHHHHHHHHHTTTCCGGGCCCEEEEEECCCCTTCCGGGCHHHHHHHHHHHHHHHHHTSSCCSSHHHHHH
T ss_pred ---cCceEeecHHHHHHHHHHhhccccCCCCeEEEEEEEEecCCcccccCHHHHHHHHHHHhcccccCccCCChHHHHHH
Confidence 1111111 1 1235899999999999876666889999999999999999999999976 9999
Q ss_pred HHHHHHHHHhCCCchhhccHHHHhhhcCChhhhhc-cCHHHHHHHHHHHHHhc----cCCCHHHHHHHHHHHH-hcCCCC
Q psy14290 213 LAALVYRVRFGESKQELQAIPQMLRELIPSDSIKI-QSSTEWKRCIIAAYNQD----AGMSPEDAKITFLKII-YRWPTF 286 (332)
Q Consensus 213 LAAl~~Q~~~Gd~~~~~~~~~~~l~~~lP~~~~~~-~~~e~w~~~I~~~~~~~----~g~s~~~A~~~yL~~~-~~~p~y 286 (332)
||||++|+++||+++. ..+...+++|+|.+++.. .+.++|+++|.++|+++ +|+++.+|+.+||++| ++||+|
T Consensus 397 LAAl~~Qae~Gd~~~~-~~~~~~L~~~lP~~~l~~~~~~~~w~~~I~~~hkk~~~~~~g~s~~eAk~~yL~~a~~~lp~Y 475 (655)
T 3pvl_A 397 LASQQYFVDYGSEMIL-ERLLSLVPTYIPDREITPLKNLEKWAQLAIAAHKKGIYAQRRTDSQKVKEDVVNYARFKWPLL 475 (655)
T ss_dssp HHHHHHHHHHTTCCCH-HHHHHHHHHHSCGGGCCSSSCHHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHhCCCcch-hhHHHHHHHhCCHHHHhccCCHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhcccc
Confidence 9999999999999542 344457889999999887 48999999999999999 8999999999999999 899999
Q ss_pred CceEEEEEeecCCCCC-ceEEEEEecCceEEEcCCCceee
Q psy14290 287 GSAFFEVKQTTEPNYP-EMLLIAINKHGVSLIHPQTKISL 325 (332)
Q Consensus 287 Gs~~F~v~~~~~~~~p-~~~~LgVn~~Gv~i~~~~~~~~l 325 (332)
|++||+|++.+++++| .+++||||+.||++++++++.++
T Consensus 476 G~~fF~vk~~~g~~lp~~~l~LgVn~~GV~v~d~~~k~ll 515 (655)
T 3pvl_A 476 FSRFYEAYKFSGPPLPKSDVIVAVNWTGVYFVDEQEQVLL 515 (655)
T ss_dssp SCEEEEEEEEESSCCSCSEEEEEEETTEEEEECTTCCEEE
T ss_pred CcEEEEEEecCCCCCCCccEEEEEcCCceEEEcCCCceEE
Confidence 9999999999988888 58999999999999999999655
No 2
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=100.00 E-value=7.5e-39 Score=300.46 Aligned_cols=222 Identities=18% Similarity=0.285 Sum_probs=183.0
Q ss_pred eeeecCCeEEEEcCChhhHHHHHHHHHH--hhcccceeEEEEeecCCCCCCCeeeeccCCceEEeec---CCCceEEEEE
Q psy14290 96 HRPIPGEEFTFQSPNAEDIRDLVVYFLE--GLKKRSSFVIALQDYKAPGEGSSFLSFHRGDLILLEE---GSTGETVFFM 170 (332)
Q Consensus 96 ~~tl~g~~~~l~~~~a~~~~elV~~~l~--gL~e~s~f~lal~d~~~~~d~~~~L~~~kgd~iiLeq---~~~~~~L~Fr 170 (332)
|.+||| ++++..++.+++.|+++.+++ ||++..+|++.+.++. +...||...+. +.+| ...+++|+||
T Consensus 6 V~l~d~-~~~~~v~~~tt~~el~~~v~~~l~L~e~~~FgL~~~~~~---~~~~wLd~~~~---l~~q~~~~~~~~~l~fr 78 (294)
T 1ef1_A 6 VTTMDA-ELEFAIQPNTTGKQLFDQVVKTIGLREVWFFGLQYQDTK---GFSTWLKLNKK---VTAQDVRKESPLLFKFR 78 (294)
T ss_dssp EEETTE-EEEEEECTTCBHHHHHHHHHHHHTCCCGGGEEEEEEBTT---SCEEECCSSSB---GGGSCBCCCSSEEEEEE
T ss_pred EEECCc-eEEEEECCCCcHHHHHHHHHHHcCCCCcceeEEEEECCC---CceeecccccC---HHhhccCCCCCEEEEEE
Confidence 678887 688888777777777776666 5778888998887753 55678876432 2233 3468999999
Q ss_pred EEeccccCC-CCCCchhhhhhHhhhhhchhccccccCHHHHHHHHHHHHHHHhCCCchhh--ccHHHHhhhcCChhhhhc
Q psy14290 171 KKLWTNTVP-GKDRNADLIFHFHQELPKLLRGYHKCSKEEAAKLAALVYRVRFGESKQEL--QAIPQMLRELIPSDSIKI 247 (332)
Q Consensus 171 rk~w~~~~~-~~~d~~~~~l~y~Qv~~dil~G~~~~~~e~a~~LAAl~~Q~~~Gd~~~~~--~~~~~~l~~~lP~~~~~~ 247 (332)
+++|.++.. ...++++++++|.|+++||+.|++||+.|+|++||||++|+++||++++. +.+. ...+|+|++++..
T Consensus 79 ~kf~~~~~~~~l~~~~~~~l~y~Q~~~dil~g~~~~~~e~a~~Laal~~q~~~Gd~~~~~~~~~~l-~~~~~lP~~~~~~ 157 (294)
T 1ef1_A 79 AKFYPEDVSEELIQDITQRLFFLQVKEGILNDDIYCPPETAVLLASYAVQSKYGDFNKEVHKSGYL-AGDKLLPQRVLEQ 157 (294)
T ss_dssp ESSCCSCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTT-TTCCCSCHHHHHH
T ss_pred EEEECCChHHhhccHHHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHHHhCCCCccccChhhc-cccccCCHHHHhh
Confidence 999987543 34678999999999999999999999999999999999999999997653 2221 1378999999876
Q ss_pred --cCHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCCCceEEEEEeecCCCCCceEEEEEecCceEEEcCCCc-ee
Q psy14290 248 --QSSTEWKRCIIAAYNQDAGMSPEDAKITFLKIIYRWPTFGSAFFEVKQTTEPNYPEMLLIAINKHGVSLIHPQTK-IS 324 (332)
Q Consensus 248 --~~~e~w~~~I~~~~~~~~g~s~~~A~~~yL~~~~~~p~yGs~~F~v~~~~~~~~p~~~~LgVn~~Gv~i~~~~~~-~~ 324 (332)
.+.++|+++|.++|++++|+|+.+|+.+||++|++||+||+++|+|++.++ .+++||||+.||++++++++ .+
T Consensus 158 ~~~~~~~~~~~I~~~~~~~~g~s~~~A~~~yL~~~~~lp~yG~~~f~v~~~~g----~~~~Lgv~~~Gi~v~~~~~k~~~ 233 (294)
T 1ef1_A 158 HKLNKDQWEERIQVWHEEHRGMLREDAVLEYLKIAQDLEMYGVNYFSIKNKKG----SELWLGVDALGLNIYEQNDRLTP 233 (294)
T ss_dssp BCCCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTTSTTTTCEEEEEECTTC----CEEEEEEETTEEEEEETTCSSSC
T ss_pred cCCCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHcccCccCceEEeeecCCC----CEEEEEEecCcEEEEeCCCcccc
Confidence 458999999999999999999999999999999999999999999987655 58999999999999999998 44
Q ss_pred eeeec
Q psy14290 325 LDYKS 329 (332)
Q Consensus 325 l~~~~ 329 (332)
+..++
T Consensus 234 ~~~f~ 238 (294)
T 1ef1_A 234 KIGFP 238 (294)
T ss_dssp SEEEE
T ss_pred ceEEE
Confidence 44443
No 3
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=100.00 E-value=7.2e-38 Score=296.61 Aligned_cols=221 Identities=18% Similarity=0.352 Sum_probs=181.1
Q ss_pred eeeecCCeEEEEcCChhhHHHHHHHHHH--hhcccceeEEEEeecCCCCCCCeeeeccCCceEEeec---CCCceEEEEE
Q psy14290 96 HRPIPGEEFTFQSPNAEDIRDLVVYFLE--GLKKRSSFVIALQDYKAPGEGSSFLSFHRGDLILLEE---GSTGETVFFM 170 (332)
Q Consensus 96 ~~tl~g~~~~l~~~~a~~~~elV~~~l~--gL~e~s~f~lal~d~~~~~d~~~~L~~~kgd~iiLeq---~~~~~~L~Fr 170 (332)
|.+||| ++.+..++.+++.|+++.+++ ||++..+|++.+. .. +...||...+. +.++ ...+++|+||
T Consensus 27 V~lldg-~~~~~v~~~t~~~el~~~v~~~l~L~e~~~FgL~~~-~~---~~~~wL~~~~~---i~~q~~~~~~~~~l~fr 98 (314)
T 1h4r_A 27 IVTMDA-EMEFNCEMKWKGKDLFDLVCRTLGLRETWFFGLQYT-IK---DTVAWLKMDKK---VLDHDVSKEEPVTFHFL 98 (314)
T ss_dssp EECSSC-EEEEEEETTCBHHHHHHHHHHHHTCCCGGGEEEEEE-ET---TEEEECCTTSB---GGGSSCCCSSSEEEEEE
T ss_pred EEeCCc-eEEEEeCCCCcHHHHHHHHHHHhCCCCCccceEEEE-eC---CcCeeCCCccC---HHHcCCCCCCCEEEEEE
Confidence 788888 788887666666666555554 6788888988876 21 55678876532 2233 2367999999
Q ss_pred EEeccccCC-CCCCchhhhhhHhhhhhchhccccccCHHHHHHHHHHHHHHHhCCCchhh--ccHHHHhhhcCChhhhhc
Q psy14290 171 KKLWTNTVP-GKDRNADLIFHFHQELPKLLRGYHKCSKEEAAKLAALVYRVRFGESKQEL--QAIPQMLRELIPSDSIKI 247 (332)
Q Consensus 171 rk~w~~~~~-~~~d~~~~~l~y~Qv~~dil~G~~~~~~e~a~~LAAl~~Q~~~Gd~~~~~--~~~~~~l~~~lP~~~~~~ 247 (332)
+++|..+.. ...++++++++|.|+++||++|++||+.|+|++||||++|+++||++++. +.+. .+.+|+|+++++.
T Consensus 99 ~kf~~~~~~~~l~~~~~~~l~y~Q~~~dil~g~~~~~~e~a~~Laal~~Qa~~Gd~~~~~~~~~~~-~~~~~lP~~~~~~ 177 (314)
T 1h4r_A 99 AKFYPENAEEELVQEITQHLFFLQVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFL-AQEELLPKRVINL 177 (314)
T ss_dssp ESSCCSSHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTT-TTCCCSCHHHHTT
T ss_pred EEEecCCchhhhcCHHHHHHHHHHHHHHHhCCCccCCHHHHHHHHHHHHHHHHCCCCccccchhhc-chhhcCCHHHHhh
Confidence 999998653 35678999999999999999999999999999999999999999997653 2221 2578999999886
Q ss_pred --cCHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCCCceEEEEEeecCCCCCceEEEEEecCceEEEcCCCce-e
Q psy14290 248 --QSSTEWKRCIIAAYNQDAGMSPEDAKITFLKIIYRWPTFGSAFFEVKQTTEPNYPEMLLIAINKHGVSLIHPQTKI-S 324 (332)
Q Consensus 248 --~~~e~w~~~I~~~~~~~~g~s~~~A~~~yL~~~~~~p~yGs~~F~v~~~~~~~~p~~~~LgVn~~Gv~i~~~~~~~-~ 324 (332)
.++++|+++|.++|++++|+|+.+|+.+||++|++||+||+++|.|++.++ .+++||||..||++++++++. +
T Consensus 178 ~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~lp~yG~~~f~v~~~~g----~~~~LgI~~~Gi~v~~~~~k~~~ 253 (314)
T 1h4r_A 178 YQMTPEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKG----TELLLGVDALGLHIYDPENRLTP 253 (314)
T ss_dssp SCCCHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTSTTTTCEEEEEEETTC----CEEEEEECSSEEEEECTTCSSSC
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHhccCccCceEEEeecCCC----CEEEEEEeCCceEEEeCCCCccc
Confidence 357899999999999999999999999999999999999999999998665 489999999999999999986 4
Q ss_pred eeeec
Q psy14290 325 LDYKS 329 (332)
Q Consensus 325 l~~~~ 329 (332)
+..++
T Consensus 254 ~~~f~ 258 (314)
T 1h4r_A 254 KISFP 258 (314)
T ss_dssp SEEEE
T ss_pred ceEEe
Confidence 44443
No 4
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=100.00 E-value=4.1e-37 Score=289.59 Aligned_cols=210 Identities=14% Similarity=0.221 Sum_probs=172.0
Q ss_pred eeeecCCeEEEEcCChhhHHHHHHHHHH--hhcccceeEEEEeecCCCCCCCeeeeccCCceEEeecC-CCceEEEEEEE
Q psy14290 96 HRPIPGEEFTFQSPNAEDIRDLVVYFLE--GLKKRSSFVIALQDYKAPGEGSSFLSFHRGDLILLEEG-STGETVFFMKK 172 (332)
Q Consensus 96 ~~tl~g~~~~l~~~~a~~~~elV~~~l~--gL~e~s~f~lal~d~~~~~d~~~~L~~~kgd~iiLeq~-~~~~~L~Frrk 172 (332)
|.+|||...++..++.+++.|+++.+++ ||++..+|++++.+.. +...|+...+. +.+|. ..+++|+||++
T Consensus 22 V~lldgt~~~~~vd~~tt~~el~~~v~~~l~L~e~~~FgL~~~~~~---~~~~wLd~~k~---i~~q~~~~~~~l~frvk 95 (296)
T 3qij_A 22 VSLLDDTVYECVVEKHAKGQDLLKRVCEHLNLLEEDYFGLAIWDNA---TSKTWLDSAKE---IKKQVRGVPWNFTFNVK 95 (296)
T ss_dssp EECTTSCEEEEECCTTCBHHHHHHHHHHHHTCSSGGGEEEEEEEET---TEEEECCTTSB---HHHHC---CCEEEEEES
T ss_pred EEccCCCEEEEEECCCCCHHHHHHHHHHHcCCCCcceeEEEEEcCC---Cccchhccchh---HHHhcCCCCcEEEEEEE
Confidence 7899999999998766666666665555 6889999999998753 44678876532 22332 35799999999
Q ss_pred eccccCCCCCCchhhhhhHhhhhhchhccccccCHHHHHHHHHHHHHHHhCCCchhhccHHHHh--hhcCChhhhhccCH
Q psy14290 173 LWTNTVPGKDRNADLIFHFHQELPKLLRGYHKCSKEEAAKLAALVYRVRFGESKQELQAIPQML--RELIPSDSIKIQSS 250 (332)
Q Consensus 173 ~w~~~~~~~~d~~~~~l~y~Qv~~dil~G~~~~~~e~a~~LAAl~~Q~~~Gd~~~~~~~~~~~l--~~~lP~~~~~~~~~ 250 (332)
+|.+......++++++|+|.|+++||+.|++||+.|+|++||||++|+++||++++... .+.+ ..++|.+ .
T Consensus 96 fy~~~~~~l~~~~tr~l~ylQ~~~dil~G~~~c~~e~a~~LAAl~~Qae~Gd~~~~~~~-~~yl~~~~~~P~~------~ 168 (296)
T 3qij_A 96 FYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALLGSYTIQSELGDYDPELHG-VDYVSDFKLAPNQ------T 168 (296)
T ss_dssp SCCSCGGGSSCHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHCSCCHHHHT-TCCCTTSCCSSSC------C
T ss_pred EeCCCchhccCHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHhcCCCCccccc-hhhCcHhhcCCcC------H
Confidence 99964445578899999999999999999999999999999999999999999764321 1122 3567764 4
Q ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCCCceEEEEEeecCCCCCceEEEEEecCceEEEcCCCc
Q psy14290 251 TEWKRCIIAAYNQDAGMSPEDAKITFLKIIYRWPTFGSAFFEVKQTTEPNYPEMLLIAINKHGVSLIHPQTK 322 (332)
Q Consensus 251 e~w~~~I~~~~~~~~g~s~~~A~~~yL~~~~~~p~yGs~~F~v~~~~~~~~p~~~~LgVn~~Gv~i~~~~~~ 322 (332)
++|+++|.++|++++|+|+.+|+.+||++|++||+||++||.|++..+ .+++||||+.||++++++++
T Consensus 169 ~~~~~~I~~~h~~~~g~s~~eA~~~yL~~a~~l~~yG~~~f~vk~~~~----~~~~LgV~~~Gi~v~~~~~k 236 (296)
T 3qij_A 169 KELEEKVMELHKSYRSMTPAQADLEFLENAKKLSMYGVDLHKAKDLEG----VDIILGVCSSGLLVYKDKLR 236 (296)
T ss_dssp HHHHHHHHHHHHTCCSCCHHHHHHHHHHHHTTSTTTTCEEEEEECTTS----CEEEEEECSSEEEEEETTEE
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHhcccccCceEEEEEcCCC----CEEEEEECCCeEEEEeCCCe
Confidence 789999999999999999999999999999999999999999987554 48999999999999999876
No 5
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=100.00 E-value=1.9e-36 Score=307.71 Aligned_cols=222 Identities=18% Similarity=0.310 Sum_probs=181.9
Q ss_pred eeeecCCeEEEEcCChhhHHHHHHHHHH--hhcccceeEEEEeecCCCCCCCeeeeccCCceEEeec---CCCceEEEEE
Q psy14290 96 HRPIPGEEFTFQSPNAEDIRDLVVYFLE--GLKKRSSFVIALQDYKAPGEGSSFLSFHRGDLILLEE---GSTGETVFFM 170 (332)
Q Consensus 96 ~~tl~g~~~~l~~~~a~~~~elV~~~l~--gL~e~s~f~lal~d~~~~~d~~~~L~~~kgd~iiLeq---~~~~~~L~Fr 170 (332)
|.+||| ++.|.+++.+++.+++..+++ ||++..+|++.+.++. +...||.+.+. +.++ ...+|+|+||
T Consensus 9 V~llDg-t~e~~vd~~tt~~ell~~V~~~LgL~e~~~FGL~~~d~~---~~~~WLd~~k~---i~~q~~~~~~~~~L~FR 81 (575)
T 2i1j_A 9 VTTMDA-ELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSK---GDLTWIKLYKK---VMQQDVKKENPLQFKFR 81 (575)
T ss_dssp EECSSC-EEEEEEETTCBHHHHHHHHHHHHTCCCGGGEEEEEEBTT---SCEEECCTTSB---GGGSCBCCCSSEEEEEE
T ss_pred EEeCCC-eEEEEECCCCCHHHHHHHHHHHcCCCCccceeEEEEecC---cchhHhhcccc---HHHhcccCCCCeEEEEE
Confidence 788887 688887666666666655554 6778899999988753 55678876432 2233 3468999999
Q ss_pred EEeccccCC-CCCCchhhhhhHhhhhhchhccccccCHHHHHHHHHHHHHHHhCCCchhh--ccHHHHhhhcCChhhhhc
Q psy14290 171 KKLWTNTVP-GKDRNADLIFHFHQELPKLLRGYHKCSKEEAAKLAALVYRVRFGESKQEL--QAIPQMLRELIPSDSIKI 247 (332)
Q Consensus 171 rk~w~~~~~-~~~d~~~~~l~y~Qv~~dil~G~~~~~~e~a~~LAAl~~Q~~~Gd~~~~~--~~~~~~l~~~lP~~~~~~ 247 (332)
+++|.++.. ...++++++|+|.|+++||+.|+|||+.++++.||||++|+++|||++.. +.+. ...+|+|..++..
T Consensus 82 vkfy~~~~~~~l~d~~t~~LlYlQvk~dIl~G~l~c~~e~a~~LAAL~lQae~GDy~~~~~~~~yl-~~~~~lP~~vl~~ 160 (575)
T 2i1j_A 82 AKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLASYAVQARHGDHNPAVHGPGFL-ANDRLLPQRVTDQ 160 (575)
T ss_dssp ESSCCSSHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTCCTTTT-TTCCCSCHHHHHT
T ss_pred EEEcCCChhhhcCCHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHhcCCChhhcccccc-cccccCCHHHHhh
Confidence 999997543 34678999999999999999999999999999999999999999997653 2222 1378999999876
Q ss_pred c--CHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCCCceEEEEEeecCCCCCceEEEEEecCceEEEcCCCc-ee
Q psy14290 248 Q--SSTEWKRCIIAAYNQDAGMSPEDAKITFLKIIYRWPTFGSAFFEVKQTTEPNYPEMLLIAINKHGVSLIHPQTK-IS 324 (332)
Q Consensus 248 ~--~~e~w~~~I~~~~~~~~g~s~~~A~~~yL~~~~~~p~yGs~~F~v~~~~~~~~p~~~~LgVn~~Gv~i~~~~~~-~~ 324 (332)
. +.+.|.+.|...|++++|+|+.+|+..||++|++||+||++||.|++..| .++|||||+.||+|++++++ .+
T Consensus 161 ~~~s~e~~~~~I~~~hk~l~G~s~~eA~~~yL~~a~~lp~YG~~~F~vkd~~g----~~l~LGV~~~GI~v~~~~~k~~~ 236 (575)
T 2i1j_A 161 HKMSREEWEQSITNWWQEHRGMLREDAMMEYLKIAQDLEMYGVNYFEIRNKKN----TELWLGVDALGLNIYEKDDKLTP 236 (575)
T ss_dssp BCCCHHHHHHHHHHHHGGGTTCCHHHHHHHHHHHHTTSTTTTCEEEEEECTTC----CEEEEEECSSEEEEEETTCSSSC
T ss_pred cCCCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhccccCCEEEEEEecCC----CEEEEEEcCCeeEEEeCCCCccc
Confidence 4 58899999999999999999999999999999999999999999987654 58999999999999999997 44
Q ss_pred eeeec
Q psy14290 325 LDYKS 329 (332)
Q Consensus 325 l~~~~ 329 (332)
+.+++
T Consensus 237 l~~f~ 241 (575)
T 2i1j_A 237 KIGFP 241 (575)
T ss_dssp SEEEE
T ss_pred ceEec
Confidence 44443
No 6
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=100.00 E-value=5.8e-36 Score=289.85 Aligned_cols=228 Identities=21% Similarity=0.343 Sum_probs=183.0
Q ss_pred eeeecCCeEEEEcCChhhHHHHHHHHHH--hhcccceeEEEEeecCC-CCCCCeeeeccCCceEEeecCC-CceEEEEEE
Q psy14290 96 HRPIPGEEFTFQSPNAEDIRDLVVYFLE--GLKKRSSFVIALQDYKA-PGEGSSFLSFHRGDLILLEEGS-TGETVFFMK 171 (332)
Q Consensus 96 ~~tl~g~~~~l~~~~a~~~~elV~~~l~--gL~e~s~f~lal~d~~~-~~d~~~~L~~~kgd~iiLeq~~-~~~~L~Frr 171 (332)
|.++||...++..++.+++.|+++.+++ ||++..+|++.+.+... ..+...|+...+ .+.+|+. .+++|+||+
T Consensus 90 V~l~dg~~~~~~vd~~tt~~el~~~v~~~l~L~e~~~FgL~~~~~~~~~~~~~~wL~~~k---~l~~q~~~~~~~l~frv 166 (371)
T 3ivf_A 90 IRMLDGTVKTIMVDDSKTVTDMLMTICARIGITNHDEYSLVRELMEEKKDDELNWLDHGR---TLREQGVEEHETLLLRR 166 (371)
T ss_dssp EECTTSCEEEEEEETTSBHHHHHHHHHHHTTCSCGGGEEEECCC----------CCCTTS---BTGGGTCCTTCEEEEEE
T ss_pred EECcCCCEEEEEECCCCCHHHHHHHHHHHcCCCCccccEEEEEecccccchHHHHHhcCc---hhHhhCCCCCceEEEEE
Confidence 7899999999988877888888887776 56788888887765421 124457776533 2334443 468999999
Q ss_pred Eeccc-cCCCCCCchhhhhhHhhhhhchhccccccCHHHHHHHHHHHHHHHhCCCchhhc--cHHHHhhhcCChhhhhcc
Q psy14290 172 KLWTN-TVPGKDRNADLIFHFHQELPKLLRGYHKCSKEEAAKLAALVYRVRFGESKQELQ--AIPQMLRELIPSDSIKIQ 248 (332)
Q Consensus 172 k~w~~-~~~~~~d~~~~~l~y~Qv~~dil~G~~~~~~e~a~~LAAl~~Q~~~Gd~~~~~~--~~~~~l~~~lP~~~~~~~ 248 (332)
++|.. +....+|+.+++++|.|+++||+.|++||+.|+|++||||++|+++||+++... .+ ..+.+|+|++++...
T Consensus 167 Kf~~~d~~~~~~D~~~~~l~y~Q~~~dil~G~~~c~~e~a~~LAAl~~qae~Gd~~~~~~~~~~-~~l~~~lP~~~~~~~ 245 (371)
T 3ivf_A 167 KFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGF-LDLKDFLPKEYVKQK 245 (371)
T ss_dssp CCCCBCSSCBTTCHHHHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTC-SCGGGTSCGGGTTSC
T ss_pred EEecCCccccCCCHHHHHHHHHHhhHHHhCceeecCHHHHHHHHHHHHHHHhCCCChhhcccch-hcccccCCHHHhCch
Confidence 99985 333357899999999999999999999999999999999999999999976432 22 247899999988654
Q ss_pred CHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCCCceEEEEEeec-CCCCCceEEEEEecCceEEEcCCCceeeee
Q psy14290 249 SSTEWKRCIIAAYNQDAGMSPEDAKITFLKIIYRWPTFGSAFFEVKQTT-EPNYPEMLLIAINKHGVSLIHPQTKISLDY 327 (332)
Q Consensus 249 ~~e~w~~~I~~~~~~~~g~s~~~A~~~yL~~~~~~p~yGs~~F~v~~~~-~~~~p~~~~LgVn~~Gv~i~~~~~~~~l~~ 327 (332)
+ +++|.+.|++++|+|+.+|+.+||++|++||+||++||.|++.. |++.|.+++||||++||+++++++++++.+
T Consensus 246 ~----e~~I~~~~~~~~g~s~~eA~~~yL~~~~~l~~yG~~~f~vk~~~~g~~~~~~~~LgI~~~GI~v~~~~~k~~l~~ 321 (371)
T 3ivf_A 246 G----ERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQE 321 (371)
T ss_dssp H----HHHHHHHHHHTTTCCHHHHHHHHHHHHHHSTTTTCEEEEEEEECTTSSCEEEEEEEECSSEEEEEETTTCCEEEE
T ss_pred H----HHHHHHHHHHccCCCHHHHHHHHHHHHhcccccCcEEEEEEEeccCCCCCccEEEEEcCCcEEEEcCCCCceEEe
Confidence 3 67899999999999999999999999999999999999998654 566677899999999999999999998887
Q ss_pred eccc
Q psy14290 328 KSIS 331 (332)
Q Consensus 328 ~~~~ 331 (332)
++|+
T Consensus 322 ~~~~ 325 (371)
T 3ivf_A 322 WSLT 325 (371)
T ss_dssp EEGG
T ss_pred eehh
Confidence 7653
No 7
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=100.00 E-value=3.3e-36 Score=286.40 Aligned_cols=229 Identities=18% Similarity=0.287 Sum_probs=175.9
Q ss_pred eeeecCCeEEEEcCC--hhhHHHHHHHHHHhhc--ccceeEEEEeecCCCCCCCeeeeccC--CceEE--------e-ec
Q psy14290 96 HRPIPGEEFTFQSPN--AEDIRDLVVYFLEGLK--KRSSFVIALQDYKAPGEGSSFLSFHR--GDLIL--------L-EE 160 (332)
Q Consensus 96 ~~tl~g~~~~l~~~~--a~~~~elV~~~l~gL~--e~s~f~lal~d~~~~~d~~~~L~~~k--gd~ii--------L-eq 160 (332)
|.+|||..+.+..++ .+++.|+++. + ||. +.++|++.+.++.. +..+.... .|.+. + .+
T Consensus 10 V~l~dg~~~~~~i~~~~~tt~~el~e~-l-gL~~~~~~~FaL~~~~~~~----e~~L~~~~~~~d~~~~W~~~l~~~~~~ 83 (322)
T 4dxa_B 10 IYRMDGSYRSVELKHGNNTTVQQIMEG-M-RLSQETQQYFTIWICSENL----SLQLKPYHKPLQHVRDWPEILAELTNL 83 (322)
T ss_dssp EECTTSCEEEEECTTGGGCCHHHHHTT-S-SCCTTGGGGEEEEEECSSC----EEECCTTCCHHHHHHTHHHHHHHHCSC
T ss_pred EEEECCcEEEEEEcCCCCCcHHHHHHH-h-CcCccccCeeEEEEECCcc----ccccCccccHHHHHHHHHHHHHHhcCC
Confidence 788999999999887 7789999765 4 676 45677777765432 22221110 00000 0 00
Q ss_pred --CCCceEEEEEEEeccccCC--CCCCchhhhhhHhhhhhchhccccccCHHHHHHHHHHHHHHHhCCCchh--hccH--
Q psy14290 161 --GSTGETVFFMKKLWTNTVP--GKDRNADLIFHFHQELPKLLRGYHKCSKEEAAKLAALVYRVRFGESKQE--LQAI-- 232 (332)
Q Consensus 161 --~~~~~~L~Frrk~w~~~~~--~~~d~~~~~l~y~Qv~~dil~G~~~~~~e~a~~LAAl~~Q~~~Gd~~~~--~~~~-- 232 (332)
.....+|+||+++|.++++ ...|+++++|+|.|+++||+.|+|||+.|+|++||||++|+++||+++. .+.+
T Consensus 84 ~~~~~~p~l~~rr~~f~~~~~~~~~~d~~t~~l~y~Q~~~dil~G~~~c~~e~a~~LAAl~~q~e~Gd~~~~~~~~~~l~ 163 (322)
T 4dxa_B 84 DPQRETPQLFLRRDVRLPLEVEKQIEDPLAILILFDEARYNLLKGFYTAPDAKLITLASLLLQIVYGNYESKKHKQGFLN 163 (322)
T ss_dssp CCCCCCCEEEEEECTTCCHHHHTTCCCHHHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHCSCCHHHHSSSCSC
T ss_pred CCCCCceEEEEEEeecccccccccccCHHHHHHHHHHHHHHHHCCcccCCHHHHHHHHHHHHHHHhCCCCcccccccccc
Confidence 1123489999999997543 4578999999999999999999999999999999999999999999754 2333
Q ss_pred HHHhhhcCChhhhhccCHHHHHHHHHHHHHhc---cCCCHH--HHHHHHHHHHhcCCCCCceEEEEEeecCCCCC----c
Q psy14290 233 PQMLRELIPSDSIKIQSSTEWKRCIIAAYNQD---AGMSPE--DAKITFLKIIYRWPTFGSAFFEVKQTTEPNYP----E 303 (332)
Q Consensus 233 ~~~l~~~lP~~~~~~~~~e~w~~~I~~~~~~~---~g~s~~--~A~~~yL~~~~~~p~yGs~~F~v~~~~~~~~p----~ 303 (332)
.+.+.+|+|++++... .++|+++|.++|+++ +|+|++ +|+.+||++|++||+||++||.|+..++++.| .
T Consensus 164 ~~~l~~~lP~~~~~~~-~~~~~~~I~~~h~~~~~~~g~s~~~a~a~~~yL~~~~~lp~yG~~~f~v~~~~~~~g~~~~~~ 242 (322)
T 4dxa_B 164 EENLKSIVPVTKLKSK-APHWTNRILHEYKNLSTSEGVSKEMHHLQRMFLQNCWEIPTYGAAFFTGQIFTKASPSNHKVI 242 (322)
T ss_dssp HHHHTTTSCTTTTTTT-GGGSHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHTSTTTTCEEEEEEEECC-------EE
T ss_pred hhhhhhhCCHHHHhcC-HHHHHHHHHHHHHhcccccCCChhHHHHHHHHHHHHhcCCCcCeEEEEEEEeccCCCCccCCC
Confidence 2357899999998764 457999999999999 999875 56999999999999999999999976543322 5
Q ss_pred eEEEEEecCceEEEcCCCceeeeeeccc
Q psy14290 304 MLLIAINKHGVSLIHPQTKISLDYKSIS 331 (332)
Q Consensus 304 ~~~LgVn~~Gv~i~~~~~~~~l~~~~~~ 331 (332)
++|||||++||+++++++++++.+++|+
T Consensus 243 ~~~LgV~~~Gv~v~~~~tk~~l~~~~~~ 270 (322)
T 4dxa_B 243 PVYVGVNIKGLHLLNMETKALLISLKYG 270 (322)
T ss_dssp EEEEEECSSEEEEEETTTCCEEEEEETT
T ss_pred eEEEEEccCceEEEcCCCceeeeccccc
Confidence 8999999999999999999999877764
No 8
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=100.00 E-value=1e-34 Score=294.75 Aligned_cols=273 Identities=19% Similarity=0.261 Sum_probs=205.2
Q ss_pred CCccccceeeeecCCccc-c----cceecc-ccccccc-----cccceeEEeccCCccce----eeeecCCeEEEEcCCh
Q psy14290 47 GKDRTADLIFHFHPGIAQ-V----TASYHK-CSRKRLQ-----VSAPLVIECASGESKQE----HRPIPGEEFTFQSPNA 111 (332)
Q Consensus 47 ~~~~~~~~l~~~~~~~~~-~----~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~----~~tl~g~~~~l~~~~a 111 (332)
||++|.+||..+.....- . ...|+. |..+ |+ ...|..+|+++....++ |.++||+..++..++.
T Consensus 158 Ps~~~~~~l~~~l~~~~~~~~~~~~~~~a~~c~~~-L~rtg~R~~~Ps~~Ei~a~~~~~~~~~~V~l~dg~~~~~~v~~~ 236 (555)
T 3au4_A 158 PSRGILKYLKFHLKRIREQFPGTEMEKYALFTYES-LKKTKCREFVPSRDEIEALIHRQEMTSTVYCHGGGSCKITINSH 236 (555)
T ss_dssp CCHHHHHHHHHHHHHHHHHSTTSHHHHHHHHHHHH-HTTCCCCSSCCCHHHHHHHHTTCCEEEEEEETTSCEEEEEECTT
T ss_pred CcHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHH-HHhcCCCCCCCCHHHHHHHHhCCCcceEEEecCCCeEEEEeCCC
Confidence 567666666444322110 0 134666 7654 22 24555577765433332 8899999999998888
Q ss_pred hhHHHHHHHHHH--hhcc-cceeEEEEeecCCCCCCCeeeeccCCceEEe------e-------cCCCceEEEEEEEecc
Q psy14290 112 EDIRDLVVYFLE--GLKK-RSSFVIALQDYKAPGEGSSFLSFHRGDLILL------E-------EGSTGETVFFMKKLWT 175 (332)
Q Consensus 112 ~~~~elV~~~l~--gL~e-~s~f~lal~d~~~~~d~~~~L~~~kgd~iiL------e-------q~~~~~~L~Frrk~w~ 175 (332)
+++.|+++.+++ ||++ ..+|++.+... +...|+..+ ..++ + .+..+++|+||+++|.
T Consensus 237 tt~~el~~~v~~~lgL~e~~~~FgL~~~~~----~~~~~L~~~---~~i~D~~~~we~~~~~~~~~~~~~~l~fR~~ff~ 309 (555)
T 3au4_A 237 TTAGEVVEKLIRGLAMEDSRNMFALFEYNG----HVDKAIESR---TVVADVLAKFEKLAATSEVGDLPWKFYFKLYCFL 309 (555)
T ss_dssp CBHHHHHHHHHHHTTCTTCCSEEEEEEESS----SCEEECCTT---SBHHHHHHHHHHHTTSCCTTCCCCEEEEEEEECS
T ss_pred CcHHHHHHHHHHHcCCCCCCCceEEEEEeC----CeeEecCCC---CchhHHHHHHHHHhhccCCCCCceEEEEEEEeec
Confidence 888888887777 4555 45677765431 334444332 1111 1 1235899999999999
Q ss_pred ccCCCCCCchhhhhhHhhhhhchhccccccCHHHHHHHHHHHHHHHhCCCchhhccHHHHhhhcCChhhhhc--------
Q psy14290 176 NTVPGKDRNADLIFHFHQELPKLLRGYHKCSKEEAAKLAALVYRVRFGESKQELQAIPQMLRELIPSDSIKI-------- 247 (332)
Q Consensus 176 ~~~~~~~d~~~~~l~y~Qv~~dil~G~~~~~~e~a~~LAAl~~Q~~~Gd~~~~~~~~~~~l~~~lP~~~~~~-------- 247 (332)
+|....+|+++++|+|.|+++||+.|++||+.|++++||||++|+++||+++.. .. ..+++|+|..+++.
T Consensus 310 ~~~~~~~d~~~~~lly~Q~~~dil~G~~~~~~e~a~~LAAl~lQ~~~GD~~~~~-~~-~~l~~~lP~~~l~~~~~~~~k~ 387 (555)
T 3au4_A 310 DTDNVPKDSVEFAFMFEQAHEAVIHGHHPAPEENLQVLAALRLQYLQGDYTLHA-AI-PPLEEVYSLQRLKARISQSTKT 387 (555)
T ss_dssp CCTTCCTTSHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHCSCCTTC-CC-CCGGGTSCCHHHHHHHHHTTCC
T ss_pred CcccCCcchHHHHhhHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHcCCCcccc-ch-hhhhhhCCHHHhhhhhcccccc
Confidence 888777888999999999999999999999999999999999999999997642 22 35678999976532
Q ss_pred ----------------cCHHHH--------HHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCCCceEEEEEeecCCCCCc
Q psy14290 248 ----------------QSSTEW--------KRCIIAAYNQDAGMSPEDAKITFLKIIYRWPTFGSAFFEVKQTTEPNYPE 303 (332)
Q Consensus 248 ----------------~~~e~w--------~~~I~~~~~~~~g~s~~~A~~~yL~~~~~~p~yGs~~F~v~~~~~~~~p~ 303 (332)
.+.++| +++|.+.|++++|+|+.+|+.+||++|++||+||++||+|+... +++|.
T Consensus 388 ~s~~~~~l~~~~~~~~~~~~~W~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~lp~yG~~~F~v~~~~-~~~~~ 466 (555)
T 3au4_A 388 FSFRTGSVVRQKVEEEQMLDMWIKEEVSSARASIIDKWRKFQGMNQEQAMAKYMALIKEWPGYGSTLFDVECKE-GGFPQ 466 (555)
T ss_dssp EECCTTSCCEECCCCHHHHHHHTHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTSTTTTCEEEEEEEEE-SSSCS
T ss_pred ccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCcCceEEEEEecC-CCCCc
Confidence 235667 78999999999999999999999999999999999999998643 44678
Q ss_pred eEEEEEecCceEEEcCCCceeeeeecc
Q psy14290 304 MLLIAINKHGVSLIHPQTKISLDYKSI 330 (332)
Q Consensus 304 ~~~LgVn~~Gv~i~~~~~~~~l~~~~~ 330 (332)
+++||||..||+++++++++++.+++|
T Consensus 467 ~l~LgV~~~GI~v~~~~~k~~l~~~~~ 493 (555)
T 3au4_A 467 ELWLGVSADAVSVYKRGEGRPLEVFQY 493 (555)
T ss_dssp EEEEEECSSEEEEEETTCSSCSEEEEG
T ss_pred eEEEEEcccceEEECCCCCeeEEEEEh
Confidence 999999999999999999988876665
No 9
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=100.00 E-value=1.9e-32 Score=265.74 Aligned_cols=232 Identities=16% Similarity=0.220 Sum_probs=184.6
Q ss_pred eeeecCC----eEEEEcCChhhHHHHHHHHHH--hhcccceeEEEEeecCCCCCCCeeeeccCCceEEeec-----CCCc
Q psy14290 96 HRPIPGE----EFTFQSPNAEDIRDLVVYFLE--GLKKRSSFVIALQDYKAPGEGSSFLSFHRGDLILLEE-----GSTG 164 (332)
Q Consensus 96 ~~tl~g~----~~~l~~~~a~~~~elV~~~l~--gL~e~s~f~lal~d~~~~~d~~~~L~~~kgd~iiLeq-----~~~~ 164 (332)
|.+++|+ ...|..++.+++.|+|+.+++ ||.+..+|++.+.+... +...||.+.+.-..++++ ...+
T Consensus 12 V~l~~g~~~~~~~~~~~~~~tt~~dl~~~v~~~lgL~~~~~FgL~~~~~~~--~~~~wL~~~~~l~~~~~k~~~~~~~~~ 89 (375)
T 2al6_A 12 YFENSSEPTTWASIIRHGDATDVRGIIQKIVDCHKVKNVACYGLRLSHLQS--EEVHWLHLDMGVSNVREKFELAHPPEE 89 (375)
T ss_dssp CCCCSSCGGGCEEEEEECTTCBHHHHHHHHHHHTTCSCGGGEEEEEEETTS--SCEEEECTTSBHHHHHHHHHTTSCGGG
T ss_pred EEecCCCCCCceEEEEeCCCCCHHHHHHHHHHHcCCCeEeEEEEEEEEcCC--CceEeeCCccchhhhhhhhhcccCCCc
Confidence 3445555 788888877778888777776 56677888887766432 556788775421111111 2357
Q ss_pred eEEEEEEEeccc-cCC-CCCCchhhhhhHhhhhhchhccc-cccCHHHHHHHHHHHHHHHhCCCchh-------hccHHH
Q psy14290 165 ETVFFMKKLWTN-TVP-GKDRNADLIFHFHQELPKLLRGY-HKCSKEEAAKLAALVYRVRFGESKQE-------LQAIPQ 234 (332)
Q Consensus 165 ~~L~Frrk~w~~-~~~-~~~d~~~~~l~y~Qv~~dil~G~-~~~~~e~a~~LAAl~~Q~~~Gd~~~~-------~~~~~~ 234 (332)
++|.||.++|.. |.. ..+|+++++++|.|+++||++|+ +||+.|+|+.||||++|+++||++.. ...+.+
T Consensus 90 ~~l~fRvrF~~~~~~~l~~~D~~t~~~~y~Q~r~Dil~g~~~~~~~e~al~LAaL~~q~~~gD~~~~~~~~k~~~~~l~k 169 (375)
T 2al6_A 90 WKYELRIRYLPKGFLNQFTEDKPTLNFFYQQVKNDYMLEIADQVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEK 169 (375)
T ss_dssp EEEEEEECCCCTTHHHHHTTCHHHHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHH
T ss_pred eEEEEEEEEecCCHHHhhhcCHHHHHHHHHHHHHHHHcCCCccCCHHHHHHHHHHHHHHHhhhccchhhcccCCHHHhhh
Confidence 999999999876 221 23678899999999999999999 89999999999999999999998532 111222
Q ss_pred H--hhhcCChhhhhccCHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCCCceEEEEEeecCCCCCceEEEEEecC
Q psy14290 235 M--LRELIPSDSIKIQSSTEWKRCIIAAYNQDAGMSPEDAKITFLKIIYRWPTFGSAFFEVKQTTEPNYPEMLLIAINKH 312 (332)
Q Consensus 235 ~--l~~~lP~~~~~~~~~e~w~~~I~~~~~~~~g~s~~~A~~~yL~~~~~~p~yGs~~F~v~~~~~~~~p~~~~LgVn~~ 312 (332)
. +++|||+.++.....+.|+++|.+.|++++|+++++|+.+||+++++||+||+++|.|+..++++.|..++||++.
T Consensus 170 ~~~l~~flP~~~~~~~~~~~~~k~I~~~~k~~~g~s~~eAk~~yL~~~~~l~~yG~~~F~v~~~~~~~~~~~l~lg~~~- 248 (375)
T 2al6_A 170 DVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESILKFFEILSPVYRFDKECFKCALGSSWIISVELAIGPEE- 248 (375)
T ss_dssp TTCGGGTSCHHHHHSSCHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTTCCCSCEEEEEEECSSSCEEEEEEEETTT-
T ss_pred cccHHHhCCHHHHHHhChHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHhhcccCCcEEEEEeecCCCCcceEEEEecCC-
Confidence 2 6789999999999999999999999999999999999999999999999999999999998877778899999985
Q ss_pred ceEEEcCCCceeeeeecc
Q psy14290 313 GVSLIHPQTKISLDYKSI 330 (332)
Q Consensus 313 Gv~i~~~~~~~~l~~~~~ 330 (332)
||+++++++++....+.|
T Consensus 249 GI~~~~~~~~~~~~~~~f 266 (375)
T 2al6_A 249 GISYLTDKGANPTHLADF 266 (375)
T ss_dssp EEEEESSTTSCEEEEECG
T ss_pred CEEEEeCCCCceEEEech
Confidence 999999888776665544
No 10
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=99.97 E-value=2.1e-31 Score=237.20 Aligned_cols=146 Identities=25% Similarity=0.359 Sum_probs=131.3
Q ss_pred CCCCchhhhhhHhhhhhchhccccccCHHHHHHHHHHHHHHHhCCCchh--hccHHHHhhhcCChhhhhccCHHHHHHHH
Q psy14290 180 GKDRNADLIFHFHQELPKLLRGYHKCSKEEAAKLAALVYRVRFGESKQE--LQAIPQMLRELIPSDSIKIQSSTEWKRCI 257 (332)
Q Consensus 180 ~~~d~~~~~l~y~Qv~~dil~G~~~~~~e~a~~LAAl~~Q~~~Gd~~~~--~~~~~~~l~~~lP~~~~~~~~~e~w~~~I 257 (332)
..+|+++++++|.|+++||++|++||+.|+|++||||++|+++||++++ .+.+. .+.+|+|+++++... +++|
T Consensus 11 ~~~d~~~~~l~y~Q~~~dil~g~~~~~~~~a~~Laal~~qa~~Gd~~~~~~~~~~~-~~~~~lP~~~~~~~~----~~~i 85 (206)
T 1mix_A 11 DSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGYQCQIQFGPHNEQKHKPGFL-ELKDFLPKEYIKQKG----ERKI 85 (206)
T ss_dssp HTSCHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCS-CGGGTSCGGGSTTCC----HHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHCCccccCHHHHHHHHHHhhhheecCCCcccccCCcc-chHhhCCHHHhhccc----HHHH
Confidence 4578999999999999999999999999999999999999999999764 23443 378999999987665 7899
Q ss_pred HHHHHhccCCCHHHHHHHHHHHHhcCCCCCceEEEEEeec-CCCCCceEEEEEecCceEEEcCCCceeeeeecc
Q psy14290 258 IAAYNQDAGMSPEDAKITFLKIIYRWPTFGSAFFEVKQTT-EPNYPEMLLIAINKHGVSLIHPQTKISLDYKSI 330 (332)
Q Consensus 258 ~~~~~~~~g~s~~~A~~~yL~~~~~~p~yGs~~F~v~~~~-~~~~p~~~~LgVn~~Gv~i~~~~~~~~l~~~~~ 330 (332)
.++|++++|+|+.+|+.+||++|++||+||+++|.|+... +++.|.+++||||.+||+++++++++++.+++|
T Consensus 86 ~~~~~~~~g~s~~~A~~~yL~~~~~l~~yG~~~f~v~~~~~g~~~~~~~~Lgi~~~Gi~~~~~~~~~~l~~~~~ 159 (206)
T 1mix_A 86 FMAHKNCGNMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSL 159 (206)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHHHSTTTTCEEEEEEECCSSCSSCEEEEEEECSSEEEEEETTTCCEEEEEEG
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHhCcccCceEEEEEEccCCCCCcCcEEEEEcccceEEeCCCCCceeeeeeh
Confidence 9999999999999999999999999999999999999876 566778999999999999999999988776654
No 11
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=99.97 E-value=5.4e-31 Score=237.87 Aligned_cols=146 Identities=24% Similarity=0.349 Sum_probs=128.0
Q ss_pred CCCCchhhhhhHhhhhhchhccccccCHHHHHHHHHHHHHHHhCCCchhh--ccHHHHhhhcCChhhhhccCHHHHHHHH
Q psy14290 180 GKDRNADLIFHFHQELPKLLRGYHKCSKEEAAKLAALVYRVRFGESKQEL--QAIPQMLRELIPSDSIKIQSSTEWKRCI 257 (332)
Q Consensus 180 ~~~d~~~~~l~y~Qv~~dil~G~~~~~~e~a~~LAAl~~Q~~~Gd~~~~~--~~~~~~l~~~lP~~~~~~~~~e~w~~~I 257 (332)
...||++++++|.|+++||+.|++||+.|+|++||||++|+++||+++.. +.+ ..+.+|+|++++... |+++|
T Consensus 22 ~~~Dp~~l~l~ylQ~~~dil~G~~~~~~e~a~~LAal~~Qae~Gd~~~~~~~~~~-~~l~~~lP~~~~~~~----~~~~I 96 (222)
T 4f7g_A 22 SSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGF-LDLKDFLPKEYVKQK----GERKI 96 (222)
T ss_dssp ----CCHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCSSC-SCGGGTSCGGGGGGC----CHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHhCCcccCCHHHHHHHHHHHHHHHHCCCCchhcccCc-cchhhccCHHHHhhh----hHHHH
Confidence 44789999999999999999999999999999999999999999997642 233 257899999987654 57889
Q ss_pred HHHHHhccCCCHHHHHHHHHHHHhcCCCCCceEEEEEeec-CCCCCceEEEEEecCceEEEcCCCceeeeeecc
Q psy14290 258 IAAYNQDAGMSPEDAKITFLKIIYRWPTFGSAFFEVKQTT-EPNYPEMLLIAINKHGVSLIHPQTKISLDYKSI 330 (332)
Q Consensus 258 ~~~~~~~~g~s~~~A~~~yL~~~~~~p~yGs~~F~v~~~~-~~~~p~~~~LgVn~~Gv~i~~~~~~~~l~~~~~ 330 (332)
.+.|++++|+|+.+|+.+||++|++||+||++||.|+... +++.|.+++||||.+||+++++++++++..++|
T Consensus 97 ~~~h~~~~g~s~~eA~~~yL~~~~~l~~yG~~~f~v~~~~~g~~~~~~~~LgI~~~GI~v~~~~tk~~l~~~~~ 170 (222)
T 4f7g_A 97 FQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSL 170 (222)
T ss_dssp HHHHHTTTTCCHHHHHHHHHHHHHTSTTTTCEEEEEEEECTTSSCEEEEEEEECSSEEEEECTTTCCEEEEEEG
T ss_pred HHHHHhccCCCHHHHHHHHHHHHhhccccCcEEEEEEEecCCCCCCCCEEEEEcCCcEEEEcCCCCceeEeccH
Confidence 9999999999999999999999999999999999999976 656677899999999999999999998887765
No 12
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens}
Probab=99.95 E-value=2.5e-27 Score=230.48 Aligned_cols=231 Identities=13% Similarity=0.190 Sum_probs=183.1
Q ss_pred eeecCCeEEEEcCChhhHHHHHHHHH--H--h--hcccceeEEEEeecCCCCCCCeeeeccCCceEEeecC-----CCce
Q psy14290 97 RPIPGEEFTFQSPNAEDIRDLVVYFL--E--G--LKKRSSFVIALQDYKAPGEGSSFLSFHRGDLILLEEG-----STGE 165 (332)
Q Consensus 97 ~tl~g~~~~l~~~~a~~~~elV~~~l--~--g--L~e~s~f~lal~d~~~~~d~~~~L~~~kgd~iiLeq~-----~~~~ 165 (332)
..|+|....+.++..++++|+|..++ . | ++...+|++.+..... +...||.+.+.-..+++.. ..+|
T Consensus 33 ~~~~~~~k~v~~d~~ttV~dVi~~i~~~~kiG~~i~~~~~FgL~~~~~~~--~~~~wL~~~~~l~~v~~k~~~~~~~~~~ 110 (392)
T 4eku_A 33 FNPGKNFKLVKCTVQTEIREIITSILLSGRIGPNIRLAECYGLRLKHMKS--DEIHWLHPQMTVGEVQDKYECLHVEAEW 110 (392)
T ss_dssp SCGGGEEEEEEEETTCBHHHHHHHHHHTTTTCSSCCCGGGEEEEEEESSS--CCEEEECTTSBHHHHHHHSTTTSCGGGE
T ss_pred cCCCCCeEEEEeCCCCcHHHHHHHHHHHhhcCCCcCccceEEEEEEECCC--CceEECCCCCcHHHHHhhhhhccCCCce
Confidence 34777777888999999999999998 3 3 2467788888765332 5668887654322222211 1478
Q ss_pred EEEEEEEecccc-CC-CCCCchhhhhhHhhhhhchhccc-cccCHHHHHHHHHHHHHHHhCCCchh-------hccHHHH
Q psy14290 166 TVFFMKKLWTNT-VP-GKDRNADLIFHFHQELPKLLRGY-HKCSKEEAAKLAALVYRVRFGESKQE-------LQAIPQM 235 (332)
Q Consensus 166 ~L~Frrk~w~~~-~~-~~~d~~~~~l~y~Qv~~dil~G~-~~~~~e~a~~LAAl~~Q~~~Gd~~~~-------~~~~~~~ 235 (332)
+++||+++|... .. ..+|+...+++|.|+++|+++|. ++|+.|+|++||||++|+++||++.. ...+.+.
T Consensus 111 ~~~fRvrF~p~d~~~l~~~D~~~~~ylY~Q~r~D~l~g~~~~~~~e~al~LAaL~~q~~~gd~~~~a~~~k~~~~~l~k~ 190 (392)
T 4eku_A 111 RYDLQIRYLPEDFMESLKEDRTTLLYFYQQLRNDYMQRYASKVSEGMALQLGCLELRRFFKDMPHNALDKKSNFELLEKE 190 (392)
T ss_dssp EEEEEECSCCTTTHHHHTTCHHHHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHH
T ss_pred EEEEEEEEEcCCHHHhhhcChHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhhhcchhhhccCCCHHHHhhh
Confidence 999999986542 11 23688999999999999999998 78999999999999999999998532 1112222
Q ss_pred --hhhcCChhhhhccCHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCCCceEEEEEeecCCCCCceEEEEEecCc
Q psy14290 236 --LRELIPSDSIKIQSSTEWKRCIIAAYNQDAGMSPEDAKITFLKIIYRWPTFGSAFFEVKQTTEPNYPEMLLIAINKHG 313 (332)
Q Consensus 236 --l~~~lP~~~~~~~~~e~w~~~I~~~~~~~~g~s~~~A~~~yL~~~~~~p~yGs~~F~v~~~~~~~~p~~~~LgVn~~G 313 (332)
+++|+|+.++.......|+.+|.+.|+++.|+++.+|+..||+.+++||+||+++|.|+..++++.|..+.||+ +|
T Consensus 191 ~~lk~flP~~l~~~ik~k~~rk~I~~~~kk~~~ls~~eakl~YL~~l~~Lp~yG~e~F~vk~~s~~~~~~~L~Vg~--~G 268 (392)
T 4eku_A 191 VGLDLFFPKQMQENLKPKQFRKMIQQTFQQYASLREEECVMKFFNTLAGFANIDQETYRCELIQGWNITVDLVIGP--KG 268 (392)
T ss_dssp TCGGGTSCHHHHHHSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTSSCCSCEEEEEEEESSSCCCEEEEEET--TE
T ss_pred ccHHHhcCHHHHhhcCHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhccCcEEEEEEeccCCcceeEEEEcC--Cc
Confidence 67899999999888899999999999999999999999999999999999999999999877776666666666 49
Q ss_pred eEEEcCCCceeeeeeccc
Q psy14290 314 VSLIHPQTKISLDYKSIS 331 (332)
Q Consensus 314 v~i~~~~~~~~l~~~~~~ 331 (332)
|++.+++++++...+.|+
T Consensus 269 Is~~~~k~~~~~~~~~f~ 286 (392)
T 4eku_A 269 IRQLTSQDAKPTCLAEFK 286 (392)
T ss_dssp EEEECSSCSCCEEEECGG
T ss_pred EEEECCCCCceeEEechH
Confidence 999999998887776653
No 13
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.82 E-value=8.6e-20 Score=188.47 Aligned_cols=215 Identities=16% Similarity=0.247 Sum_probs=167.2
Q ss_pred eEEEEcCChhhHHHHHHHHHH--hhcccceeEEEEeecCCCCCCCeeeeccCCceEEee---c--CCCceEEEEEEEecc
Q psy14290 103 EFTFQSPNAEDIRDLVVYFLE--GLKKRSSFVIALQDYKAPGEGSSFLSFHRGDLILLE---E--GSTGETVFFMKKLWT 175 (332)
Q Consensus 103 ~~~l~~~~a~~~~elV~~~l~--gL~e~s~f~lal~d~~~~~d~~~~L~~~kgd~iiLe---q--~~~~~~L~Frrk~w~ 175 (332)
-..|..+..+++.+++...++ ++.+..+|++.+.+... +...||.+.+.-..+.+ + ...+|++.||.|+|.
T Consensus 23 ~~~v~~~~~~~~~~i~~~v~~~l~i~~~~~fgL~~~~~~~--~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~rvrf~p 100 (656)
T 2j0j_A 23 ASIIRHGDATDVRGIIQKIVDCHKVKNVACYGLRLSHLQS--EEVHWLHLDMGVSNVREKFELAHPPEEWKYELRIRYLP 100 (656)
T ss_dssp EEEEEECTTCBHHHHHHHHHHHTTCSCGGGEEEEEEESSS--CCEEEECTTSBHHHHHHHHTTTSCTTSEEEEEEECCCC
T ss_pred eeEEEeCCCCcHHHHHHHHHHhcCcceeeeEEEEEeeccc--CceeeeCCCCcHHHHHhhhcccCCCcceEEEEEEEEcC
Confidence 566667777777887777776 45688889999887632 66789987543222111 1 346899999999988
Q ss_pred c-cCCC-CCCchhhhhhHhhhhhchhccccc-cCHHHHHHHHHHHHHHHhCCCchh-------hccHHHH--hhhcCChh
Q psy14290 176 N-TVPG-KDRNADLIFHFHQELPKLLRGYHK-CSKEEAAKLAALVYRVRFGESKQE-------LQAIPQM--LRELIPSD 243 (332)
Q Consensus 176 ~-~~~~-~~d~~~~~l~y~Qv~~dil~G~~~-~~~e~a~~LAAl~~Q~~~Gd~~~~-------~~~~~~~--l~~~lP~~ 243 (332)
. +... .+|..++.++|.|++.|+++|+.+ |+.++|+.||+|.+|..+||++.. .+.+.+. +++|||+.
T Consensus 101 ~~~~~l~~~d~~~~~ylf~Q~r~D~~~~~~~~~~~~~al~La~l~~~~~~~d~~~~a~~~~~~~~~~~k~~~~~~fiP~~ 180 (656)
T 2j0j_A 101 KGFLNQFTEDKPTLNFFYQQVKNDYMLEIADQVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKS 180 (656)
T ss_dssp TTHHHHHHTCHHHHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTTGGGTSCHH
T ss_pred CCHHHHHhccHHHHHHHHHHHHHHHHhcccccccHhHHHHHHHHHHHHHhhhccchhhhcCCCHHHHHhhccHHHhCCHH
Confidence 7 3222 267778999999999999999997 889999999999999999999422 1122222 36899999
Q ss_pred hhhccCHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCCCceEEEEEeecCCCCCceEEEEEecCceEEEcCC
Q psy14290 244 SIKIQSSTEWKRCIIAAYNQDAGMSPEDAKITFLKIIYRWPTFGSAFFEVKQTTEPNYPEMLLIAINKHGVSLIHPQ 320 (332)
Q Consensus 244 ~~~~~~~e~w~~~I~~~~~~~~g~s~~~A~~~yL~~~~~~p~yGs~~F~v~~~~~~~~p~~~~LgVn~~Gv~i~~~~ 320 (332)
++.......++.+|.+.|+++.++++.+|+.+||+.++.+++||+..|.|+..++.+.+.++.||.+. ||+....+
T Consensus 181 ~~~~~~~~~~~k~i~~~~k~~~~~~~~~~~lk~l~~l~~~~~yg~e~f~~~~~~g~~~~~~l~vg~~~-GI~~~~~~ 256 (656)
T 2j0j_A 181 LLDSVKAKTLRKLIQQTFRQFANLNREESILKFFEILSPVYRFDKECFKCALGSSWIISVELAIGPEE-GISYLTDK 256 (656)
T ss_dssp HHHHSCHHHHHHHHHHHHGGGTTCCHHHHHHHHHHHHGGGCCTTSEEEEEEEESSSEEEEEEEEETTT-EEEECCSS
T ss_pred HHHHhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccCceEEeeccCCCCcccEEEEECCCC-CeEEECCC
Confidence 99998888899999999999999999999999999999999999999999998775333445555433 99977654
No 14
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=98.58 E-value=7.8e-08 Score=99.01 Aligned_cols=120 Identities=42% Similarity=0.643 Sum_probs=90.3
Q ss_pred hhhhccccC--------CCc--cccceeeeecCCcccccceeccccccccccccceeEEeccCCcc----ce--eeeecC
Q psy14290 38 EAWTNHRST--------GKD--RTADLIFHFHPGIAQVTASYHKCSRKRLQVSAPLVIECASGESK----QE--HRPIPG 101 (332)
Q Consensus 38 ~~w~~~~~~--------~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~tl~g 101 (332)
..|+.|+++ ++. +-.-+|++.+.|+-. |.+-++..+.+.++++..+..++.. +. +.++++
T Consensus 470 ~~lp~YG~~fF~vk~~~g~~lp~~~l~LgVn~~GV~v----~d~~~k~ll~f~~~eI~~is~~~~~~~~~~~ftl~~~~~ 545 (655)
T 3pvl_A 470 FKWPLLFSRFYEAYKFSGPPLPKSDVIVAVNWTGVYF----VDEQEQVLLELSFPEIMAVSSSRGTKMMAPSFTLATIKG 545 (655)
T ss_dssp HHCTTTSCEEEEEEEEESSCCSCSEEEEEEETTEEEE----ECTTCCEEEEEEGGGEEEEEEECCCSSSCCEEEEEETTS
T ss_pred HhccccCcEEEEEEecCCCCCCCccEEEEEcCCceEE----EcCCCceEEEechhHceEEeccCcccccccEEEEEeccC
Confidence 789999988 210 013678888888764 3343444456788888887654421 22 567788
Q ss_pred CeEEEEcCChhhHHHHHHHHHHhhcccceeEEEEeecCCC-CCCCeeeeccCCceEEeecC
Q psy14290 102 EEFTFQSPNAEDIRDLVVYFLEGLKKRSSFVIALQDYKAP-GEGSSFLSFHRGDLILLEEG 161 (332)
Q Consensus 102 ~~~~l~~~~a~~~~elV~~~l~gL~e~s~f~lal~d~~~~-~d~~~~L~~~kgd~iiLeq~ 161 (332)
++|+|.+++|.++.+||..++++|++||.|++|++|+..+ ++++.+|+|+|||+|+|.++
T Consensus 546 ~~~~F~T~~a~~I~~LI~~yi~~Lk~rs~~~~Al~d~~~~~~~~~~~L~f~kGDlI~l~~~ 606 (655)
T 3pvl_A 546 DEYTFTSSNAEDIRDLVVTFLEGLRKRSKYVVALQDNPNPAGEESGFLSFAKGDLIILDHD 606 (655)
T ss_dssp CEEEEECTTHHHHHHHHHHHHHHHHHHCCEEEESSCCCC-----CCBCCCCTTCEEEESSC
T ss_pred ceEEEEcCCHHHHHHHHHHHHHHHhhcchhhhHHhhcccCCCCCCCcccccCCCEEEEccc
Confidence 8999999999999999999999999999999999999743 48899999999999988543
No 15
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=97.62 E-value=0.00024 Score=54.34 Aligned_cols=82 Identities=13% Similarity=0.131 Sum_probs=59.8
Q ss_pred hHhhhhhchhccc--cccCHHHHHHHHHHHHHHHhCCCchhhccHHHHhhhcCChhhhhccCHHHHHHHHHHHHHhccCC
Q psy14290 190 HFHQELPKLLRGY--HKCSKEEAAKLAALVYRVRFGESKQELQAIPQMLRELIPSDSIKIQSSTEWKRCIIAAYNQDAGM 267 (332)
Q Consensus 190 ~y~Qv~~dil~G~--~~~~~e~a~~LAAl~~Q~~~Gd~~~~~~~~~~~l~~~lP~~~~~~~~~e~w~~~I~~~~~~~~g~ 267 (332)
-|.++...|..-. ...+.|+.++|=||-=|+..||++...|...+ ...+.=..+|+++.||
T Consensus 5 ~F~~A~~~v~~l~~~~~~~~~~~L~LYalyKQAt~Gd~~~~~Pg~~d-----------------~~~~aKw~AW~~l~gm 67 (89)
T 1hbk_A 5 VFEECVSFINGLPRTINLPNELKLDLYKYYKQSTIGNCNIKEPSAHK-----------------YIDRKKYEAWKSVENL 67 (89)
T ss_dssp HHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTS-----------------HHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHhcCCcCCCCHHHHHHHHHHHHHhhcCCCCCCCCCccC-----------------HHhHHHHHHHHHhcCC
Confidence 4666666665544 56788999999999999999999754333211 0112235789999999
Q ss_pred CHHHHHHHHHHHH-hcCCCCCc
Q psy14290 268 SPEDAKITFLKII-YRWPTFGS 288 (332)
Q Consensus 268 s~~~A~~~yL~~~-~~~p~yGs 288 (332)
|+++|+..|++++ .-.|-|+.
T Consensus 68 s~eeA~~~YI~~v~~l~~~~~~ 89 (89)
T 1hbk_A 68 NREDAQKRYVDIVSEIFPYWQD 89 (89)
T ss_dssp CHHHHHHHHHHHHHHHCTTTTC
T ss_pred CHHHHHHHHHHHHHHHcccccC
Confidence 9999999999999 44577763
No 16
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=97.53 E-value=0.00017 Score=55.10 Aligned_cols=84 Identities=17% Similarity=0.241 Sum_probs=61.8
Q ss_pred hhhhHhhhhhchhccccccCHHHHHHHHHHHHHHHhCCCchhhccHHHHhhhcCChhhhhccCHHHHHHHHHHHHHhccC
Q psy14290 187 LIFHFHQELPKLLRGYHKCSKEEAAKLAALVYRVRFGESKQELQAIPQMLRELIPSDSIKIQSSTEWKRCIIAAYNQDAG 266 (332)
Q Consensus 187 ~~l~y~Qv~~dil~G~~~~~~e~a~~LAAl~~Q~~~Gd~~~~~~~~~~~l~~~lP~~~~~~~~~e~w~~~I~~~~~~~~g 266 (332)
++--|.++...|..-.-..+.|+..+|=||-=|+..||++...|...+. .... =..+|+++.|
T Consensus 4 L~~~F~~A~~~vk~l~~~p~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~------------~~~a-----Kw~AW~~l~g 66 (89)
T 3epy_A 4 LQADFDRAAEDVRKLKARPDDGELKELYGLYKQAIVGDINIACPGMLDL------------KGKA-----KWEAWNLKKG 66 (89)
T ss_dssp HHHHHHHHHHHGGGCSSCCCHHHHHHHHHHHHHHHTCSCCSCCTTTTCH------------HHHH-----HHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHcCCCcCHHHHHHHHHHHHHHhhCCCCCCCCcccch------------HHHH-----HHHHHHHhhC
Confidence 3445788888887666667889999999999999999996543332110 0112 2458999999
Q ss_pred CCHHHHHHHHHHHHhcC-CCCC
Q psy14290 267 MSPEDAKITFLKIIYRW-PTFG 287 (332)
Q Consensus 267 ~s~~~A~~~yL~~~~~~-p~yG 287 (332)
||+++|+..|++++.++ |-||
T Consensus 67 ~s~eeA~~~Yi~~v~~l~~ky~ 88 (89)
T 3epy_A 67 LSTEDATSAYISKAKELIEKYG 88 (89)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999554 6555
No 17
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=97.44 E-value=0.00022 Score=54.23 Aligned_cols=80 Identities=19% Similarity=0.196 Sum_probs=57.8
Q ss_pred HhhhhhchhccccccCHHHHHHHHHHHHHHHhCCCchhhccHHHHhhhcCChhhhhccCHHHHHHHHHHHHHhccCCCHH
Q psy14290 191 FHQELPKLLRGYHKCSKEEAAKLAALVYRVRFGESKQELQAIPQMLRELIPSDSIKIQSSTEWKRCIIAAYNQDAGMSPE 270 (332)
Q Consensus 191 y~Qv~~dil~G~~~~~~e~a~~LAAl~~Q~~~Gd~~~~~~~~~~~l~~~lP~~~~~~~~~e~w~~~I~~~~~~~~g~s~~ 270 (332)
|.++...|..-.-..+.|+.++|=||-=|+..||++...|...+ ...+.=.++|.++.|||++
T Consensus 6 F~~A~~~vk~l~~~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d-----------------~~~~aKw~AW~~l~gms~e 68 (87)
T 2cb8_A 6 FEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLD-----------------FTGKAKWDAWNELKGTSKE 68 (87)
T ss_dssp HHHHHHHGGGCSSCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTC-----------------HHHHHHHHHHHTTTTCCHH
T ss_pred HHHHHHHHHHccCCcCHHHHHHHHHHHHhhhhCCCCCCCCCccc-----------------HHHHHHHHHHHHcCCCCHH
Confidence 56666666554445688999999999999999999754343211 0112235789999999999
Q ss_pred HHHHHHHHHHhcC-CCCC
Q psy14290 271 DAKITFLKIIYRW-PTFG 287 (332)
Q Consensus 271 ~A~~~yL~~~~~~-p~yG 287 (332)
+|+..|++++.++ |-||
T Consensus 69 eA~~~Yi~~v~~l~~~~~ 86 (87)
T 2cb8_A 69 DAMKAYINKVEELKKKYG 86 (87)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 9999999999543 5444
No 18
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=97.42 E-value=0.00015 Score=55.12 Aligned_cols=80 Identities=21% Similarity=0.258 Sum_probs=56.9
Q ss_pred HhhhhhchhccccccCHHHHHHHHHHHHHHHhCCCchhhccHHHHhhhcCChhhhhccCHHHHHHHHHHHHHhccCCCHH
Q psy14290 191 FHQELPKLLRGYHKCSKEEAAKLAALVYRVRFGESKQELQAIPQMLRELIPSDSIKIQSSTEWKRCIIAAYNQDAGMSPE 270 (332)
Q Consensus 191 y~Qv~~dil~G~~~~~~e~a~~LAAl~~Q~~~Gd~~~~~~~~~~~l~~~lP~~~~~~~~~e~w~~~I~~~~~~~~g~s~~ 270 (332)
|.++...|..-.-..+.++.++|=||-=|+..||++...|...+ ...+.=..+|+++.|||++
T Consensus 5 F~~A~~~v~~l~~~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d-----------------~~~raKw~AW~~l~gms~e 67 (86)
T 1st7_A 5 FEEKAKAVNELPTKPSTDELLELYALYKQATVGDNDKEKPGIFN-----------------MKDRYKWEAWENLKGKSQE 67 (86)
T ss_dssp HHHHHHHHTSCSSCCCHHHHHHHHHHHHHHHHCSCCCCCCCSSC-----------------HHHHHHHHHHHTTTTTHHH
T ss_pred HHHHHHHHHHccCCcCHHHHHHHHHHHHHHhhCCCCCCCCCccC-----------------HHHHHHHHHHHHcCCCCHH
Confidence 55666655544345678999999999999999999744333211 0112235789999999999
Q ss_pred HHHHHHHHHHhcC-CCCC
Q psy14290 271 DAKITFLKIIYRW-PTFG 287 (332)
Q Consensus 271 ~A~~~yL~~~~~~-p~yG 287 (332)
+|+..|++++.++ |-||
T Consensus 68 eA~~~YI~~v~~l~~~~~ 85 (86)
T 1st7_A 68 DAEKEYIALVDQLIAKYS 85 (86)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhhhc
Confidence 9999999999543 5554
No 19
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.30 E-value=0.00086 Score=53.11 Aligned_cols=85 Identities=15% Similarity=0.125 Sum_probs=63.1
Q ss_pred hhHhhhhhchhccccccCHHHHHHHHHHHHHHHhCCCchhhccHHHHhhhcCChhhhhccCHHHHHHHHHHHHHhccCCC
Q psy14290 189 FHFHQELPKLLRGYHKCSKEEAAKLAALVYRVRFGESKQELQAIPQMLRELIPSDSIKIQSSTEWKRCIIAAYNQDAGMS 268 (332)
Q Consensus 189 l~y~Qv~~dil~G~~~~~~e~a~~LAAl~~Q~~~Gd~~~~~~~~~~~l~~~lP~~~~~~~~~e~w~~~I~~~~~~~~g~s 268 (332)
--|.++...|..-.-..+.++.++|=||-=|+..||++...|.... ...+.=..+|+++.|||
T Consensus 10 ~~F~~A~~~vk~l~~~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d-----------------~~~raKw~AW~~l~gms 72 (109)
T 2cop_A 10 ELFEKAAAHLQGLIQVASREQLLYLYARYKQVKVGNCNTPKPSFFD-----------------FEGKQKWEAWKALGDSS 72 (109)
T ss_dssp HHHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHHTCSCCSCCCCSSC-----------------HHHHHHHHHHHSCTTCC
T ss_pred HHHHHHHHHHHHcccCCCHHHHHHHHHHHHHhhcCCCCCCCCCccC-----------------HHHHHHHHHHHHhcCCC
Confidence 4577777777765556788999999999999999999754333211 01122357899999999
Q ss_pred HHHHHHHHHHHH-hcCCCCCceE
Q psy14290 269 PEDAKITFLKII-YRWPTFGSAF 290 (332)
Q Consensus 269 ~~~A~~~yL~~~-~~~p~yGs~~ 290 (332)
+++|+..|++++ .-.|-|+..-
T Consensus 73 ~eeAm~~YI~lv~~l~~~~~~~~ 95 (109)
T 2cop_A 73 PSQAMQEYIAVVKKLDPGWNPQI 95 (109)
T ss_dssp HHHHHHHHHHHHHHHCTTCCCCC
T ss_pred HHHHHHHHHHHHHHHhhhhcccc
Confidence 999999999999 4447777543
No 20
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=97.21 E-value=0.00024 Score=54.97 Aligned_cols=81 Identities=17% Similarity=0.232 Sum_probs=58.7
Q ss_pred hHhhhhhchhccc-cccCHHHHHHHHHHHHHHHhCCCchhhccHHHHhhhcCChhhhhccCHHHHHHHHHHHHHhccCCC
Q psy14290 190 HFHQELPKLLRGY-HKCSKEEAAKLAALVYRVRFGESKQELQAIPQMLRELIPSDSIKIQSSTEWKRCIIAAYNQDAGMS 268 (332)
Q Consensus 190 ~y~Qv~~dil~G~-~~~~~e~a~~LAAl~~Q~~~Gd~~~~~~~~~~~l~~~lP~~~~~~~~~e~w~~~I~~~~~~~~g~s 268 (332)
-|.++...|..-. ...+.|+.++|=||-=|+..||++...|...+ + ..+.=..+|+++.|||
T Consensus 13 ~F~~A~~~vk~l~~~~ps~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d------~-----------~graKw~AW~~l~gmS 75 (96)
T 2lbb_A 13 DFDAAVKYVSNTTTMMASNDDKLCFYKYYKQATVGDCNKPKPGMLQ------L-----------QEKYKWEAWNALRGMS 75 (96)
T ss_dssp THHHHHHHHHHCCCSCCCTTTTTHHHHHHHHTTTSSCCCCCCCSSC------S-----------HHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccc------H-----------HhHHHHHHHHHhcCCC
Confidence 3666666666544 45678899999999999999999754333211 0 1122357899999999
Q ss_pred HHHHHHHHHHHH-hcCCCCC
Q psy14290 269 PEDAKITFLKII-YRWPTFG 287 (332)
Q Consensus 269 ~~~A~~~yL~~~-~~~p~yG 287 (332)
+++|+..|++++ .-.|-||
T Consensus 76 ~eeAm~~YI~lv~~l~~~~~ 95 (96)
T 2lbb_A 76 TESAKEAYVKLLDTLAPSWR 95 (96)
T ss_dssp HHHHHHHHHHHHHHHCGGGT
T ss_pred HHHHHHHHHHHHHHHhchhc
Confidence 999999999999 4446665
No 21
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=97.00 E-value=0.0018 Score=51.05 Aligned_cols=76 Identities=17% Similarity=0.155 Sum_probs=55.6
Q ss_pred hHhhhhhchh----ccccccCHHHHHHHHHHHHHHHhCCCchhhccHHHHhhhcCChhhhhccCHHHHHHHHHHHHHhcc
Q psy14290 190 HFHQELPKLL----RGYHKCSKEEAAKLAALVYRVRFGESKQELQAIPQMLRELIPSDSIKIQSSTEWKRCIIAAYNQDA 265 (332)
Q Consensus 190 ~y~Qv~~dil----~G~~~~~~e~a~~LAAl~~Q~~~Gd~~~~~~~~~~~l~~~lP~~~~~~~~~e~w~~~I~~~~~~~~ 265 (332)
-|.++...+. .|.+..+.++.++|=||-=|+..||++...|..... ..+.=..+|+++.
T Consensus 11 ~F~~A~~~vk~l~~~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~-----------------~~~aKw~AW~~l~ 73 (106)
T 2wh5_A 11 QFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDP-----------------IGRYKWDAWNSLG 73 (106)
T ss_dssp HHHHHHHHHHHSCSSCSCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCH-----------------HHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccH-----------------HHHHHHHHHHHhc
Confidence 4666666654 344567899999999999999999996443332110 1112257899999
Q ss_pred CCCHHHHHHHHHHHHhc
Q psy14290 266 GMSPEDAKITFLKIIYR 282 (332)
Q Consensus 266 g~s~~~A~~~yL~~~~~ 282 (332)
|||+++|+..|++++.+
T Consensus 74 gms~eeA~~~YI~~v~~ 90 (106)
T 2wh5_A 74 KMSREEAMSAYITEMKL 90 (106)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 99999999999999864
No 22
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=96.99 E-value=0.0017 Score=52.00 Aligned_cols=80 Identities=14% Similarity=0.126 Sum_probs=58.6
Q ss_pred hhhhhHhhhhhchhc----cccccCHHHHHHHHHHHHHHHhCCCchhhccHHHHhhhcCChhhhhccCHHHHHHHHHHHH
Q psy14290 186 DLIFHFHQELPKLLR----GYHKCSKEEAAKLAALVYRVRFGESKQELQAIPQMLRELIPSDSIKIQSSTEWKRCIIAAY 261 (332)
Q Consensus 186 ~~~l~y~Qv~~dil~----G~~~~~~e~a~~LAAl~~Q~~~Gd~~~~~~~~~~~l~~~lP~~~~~~~~~e~w~~~I~~~~ 261 (332)
.++--|.++...|.. |....+.++.++|=||-=|+..||++...|..... ..... ..+|
T Consensus 23 dLe~~F~~A~~~Vk~l~~~g~~~ps~d~~L~LYaLyKQAT~Gd~~~~~Pg~~d~------------~graK-----w~AW 85 (119)
T 3flv_A 23 MHETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDP------------IGRYK-----WDAW 85 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCH------------HHHHH-----HHHH
T ss_pred HHHHHHHHHHHHHHhCcccCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccCH------------HHHHH-----HHHH
Confidence 455567777777764 33456889999999999999999996543432110 01222 4589
Q ss_pred HhccCCCHHHHHHHHHHHHhc
Q psy14290 262 NQDAGMSPEDAKITFLKIIYR 282 (332)
Q Consensus 262 ~~~~g~s~~~A~~~yL~~~~~ 282 (332)
+++.|||+++|+..|++++.+
T Consensus 86 ~~l~gmS~eeAm~~YI~~v~~ 106 (119)
T 3flv_A 86 SSLGDMTKEEAMIAYVEEMKK 106 (119)
T ss_dssp HHTTTCCHHHHHHHHHHHHHH
T ss_pred HHccCCCHHHHHHHHHHHHHH
Confidence 999999999999999999854
No 23
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.91 E-value=0.002 Score=51.48 Aligned_cols=85 Identities=15% Similarity=0.173 Sum_probs=60.9
Q ss_pred hhhHhhhhhchhccccccCHHHHHHHHHHHHHHHhCCCchhhccHHHHhhhcCChhhhhccCHHHHHHHHHHHHHhccCC
Q psy14290 188 IFHFHQELPKLLRGYHKCSKEEAAKLAALVYRVRFGESKQELQAIPQMLRELIPSDSIKIQSSTEWKRCIIAAYNQDAGM 267 (332)
Q Consensus 188 ~l~y~Qv~~dil~G~~~~~~e~a~~LAAl~~Q~~~Gd~~~~~~~~~~~l~~~lP~~~~~~~~~e~w~~~I~~~~~~~~g~ 267 (332)
.--|.++...|..-.-..+.++.++|=||-=|+..||++...|..... ..+.=.++|+++.||
T Consensus 17 ~~~F~~A~~~vk~l~~~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~-----------------~graKw~AW~~l~gm 79 (116)
T 2cqu_A 17 QKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDL-----------------INKAKWDAWNALGSL 79 (116)
T ss_dssp HHHHHHHHHHHHHCCSCCCHHHHHHHHHHHTTTTTCSCCSCCCCTTCH-----------------HHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccH-----------------HHHHHHHHHHHhcCC
Confidence 445777777766543345789999999999999999997443332110 112235689999999
Q ss_pred CHHHHHHHHHHHHh-cCCCCCce
Q psy14290 268 SPEDAKITFLKIIY-RWPTFGSA 289 (332)
Q Consensus 268 s~~~A~~~yL~~~~-~~p~yGs~ 289 (332)
|+++|+..|++++. -.|-|++.
T Consensus 80 s~eeAm~~YI~lv~~l~~~~~~~ 102 (116)
T 2cqu_A 80 PKEAARQNYVDLVSSLSPSLESS 102 (116)
T ss_dssp CHHHHHHHHHHHHHHHCSCCCCC
T ss_pred CHHHHHHHHHHHHHHHccccccc
Confidence 99999999999994 44766653
No 24
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=96.81 E-value=0.0031 Score=49.61 Aligned_cols=76 Identities=13% Similarity=0.191 Sum_probs=54.7
Q ss_pred hHhhhhhchhc----cccccCHHHHHHHHHHHHHHHhCCCchhhccHHHHhhhcCChhhhhccCHHHHHHHHHHHHHhcc
Q psy14290 190 HFHQELPKLLR----GYHKCSKEEAAKLAALVYRVRFGESKQELQAIPQMLRELIPSDSIKIQSSTEWKRCIIAAYNQDA 265 (332)
Q Consensus 190 ~y~Qv~~dil~----G~~~~~~e~a~~LAAl~~Q~~~Gd~~~~~~~~~~~l~~~lP~~~~~~~~~e~w~~~I~~~~~~~~ 265 (332)
-|.++...|.. |....+.++..+|=||-=|+..||++...|...+. .. +.=..+|+++.
T Consensus 7 ~F~~A~~~vk~l~~~g~~~ps~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~------------~~-----raKw~AW~~l~ 69 (106)
T 3fp5_A 7 KFDKAVEIVQSLPKDGPIKPTQDEQLYFYKYFKQATVGDVNISRPGLMDF------------TG-----KAKWDAWKSVE 69 (106)
T ss_dssp HHHHHHHHHHHCCSSSSSCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCH------------HH-----HHHHHHHHTTT
T ss_pred HHHHHHHHHHhcccccCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccch------------HH-----HHHHHHHHHcc
Confidence 46666665543 33567889999999999999999996543332110 11 22245899999
Q ss_pred CCCHHHHHHHHHHHHhc
Q psy14290 266 GMSPEDAKITFLKIIYR 282 (332)
Q Consensus 266 g~s~~~A~~~yL~~~~~ 282 (332)
|||+++|+..|++++.+
T Consensus 70 gmS~eeA~~~YI~~v~~ 86 (106)
T 3fp5_A 70 GTSKEVAYQKYVEKLLE 86 (106)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 99999999999999854
No 25
>2kc2_A Talin-1, F1; FERM, adhesion, cell membrane, cell projection, cytoplasm, cytoskeleton, membrane, phosphoprotein, structural protein; NMR {Mus musculus}
Probab=91.12 E-value=0.31 Score=39.39 Aligned_cols=43 Identities=9% Similarity=0.207 Sum_probs=33.3
Q ss_pred eeeecCCeEEEEcCChhhHHHHHHHHHHhh--cccceeEEEEeec
Q psy14290 96 HRPIPGEEFTFQSPNAEDIRDLVVYFLEGL--KKRSSFVIALQDY 138 (332)
Q Consensus 96 ~~tl~g~~~~l~~~~a~~~~elV~~~l~gL--~e~s~f~lal~d~ 138 (332)
|.++||...++..+.+.++++++..++..+ .-...|.++....
T Consensus 16 V~llDg~~ktl~VD~S~~V~~lv~~Ic~kigI~n~~ey~L~~~~~ 60 (128)
T 2kc2_A 16 IRMLDGTVKTIMVDDSKTVTDMLMTICARIGITNHDEYSLVRELM 60 (128)
T ss_dssp EECTTSCEEEEEEEECSSHHHHHHHHHHHHTCCCCSSEEEEEECC
T ss_pred EEcCCCCEEEEEeCCCcCHHHHHHHHHHHhCCCCccccccccccc
Confidence 788999999999998889999999888754 3334477766443
No 26
>1ntv_A Disabled homolog 1; beta-sandwich, signaling protein; 1.50A {Mus musculus} SCOP: b.55.1.2 PDB: 1nu2_A* 1oqn_A*
Probab=62.50 E-value=8.2 Score=31.55 Aligned_cols=29 Identities=10% Similarity=0.266 Sum_probs=25.4
Q ss_pred CceEEEEEecCceEEEcCCCceeeeeecc
Q psy14290 302 PEMLLIAINKHGVSLIHPQTKISLDYKSI 330 (332)
Q Consensus 302 p~~~~LgVn~~Gv~i~~~~~~~~l~~~~~ 330 (332)
+..+.|-|+..||.++|+++++++..+++
T Consensus 60 ~~~v~L~IS~~GI~v~d~~tk~~~~~~~l 88 (152)
T 1ntv_A 60 KQKIFLTISFGGIKIFDEKTGALQHHHAV 88 (152)
T ss_dssp CEEEEEEEETTEEEEEETTTCCEEEEECG
T ss_pred CCEEEEEEECCeEEEEECCCCceEeeeec
Confidence 35799999999999999999999886654
No 27
>2cy5_A Epidermal growth factor receptor pathway substrate 8-like protein 1; structural genomics, signal transduction, phosphorylation, PTB domain, NPPSFA; 1.90A {Mus musculus} SCOP: b.55.1.2 PDB: 2cy4_A
Probab=60.50 E-value=11 Score=30.77 Aligned_cols=35 Identities=17% Similarity=0.365 Sum_probs=30.6
Q ss_pred cCCCCCceEEEEEecCceEEEcCCCceeeeeeccc
Q psy14290 297 TEPNYPEMLLIAINKHGVSLIHPQTKISLDYKSIS 331 (332)
Q Consensus 297 ~~~~~p~~~~LgVn~~Gv~i~~~~~~~~l~~~~~~ 331 (332)
+|.-|..+++|=|+..+|.++|..|++.++.++++
T Consensus 43 kg~iW~Q~m~L~v~~~~v~LlD~et~eelE~fpl~ 77 (140)
T 2cy5_A 43 QGRVWAQEMLLRVSPSQVTLLDPVSKEELESYPLD 77 (140)
T ss_dssp TTCCCCEEEEEEECSSEEEEECTTTCCEEEEEEGG
T ss_pred cCCcccceeEEEECCCeEEEEccCccchhhcCChh
Confidence 55567778999999999999999999999988764
No 28
>1p3r_A Disabled homolog 2; PTB, signaling protein; 2.10A {Mus musculus} SCOP: b.55.1.2 PDB: 1m7e_A
Probab=54.89 E-value=11 Score=31.01 Aligned_cols=28 Identities=14% Similarity=0.325 Sum_probs=24.9
Q ss_pred ceEEEEEecCceEEEcCCCceeeeeecc
Q psy14290 303 EMLLIAINKHGVSLIHPQTKISLDYKSI 330 (332)
Q Consensus 303 ~~~~LgVn~~Gv~i~~~~~~~~l~~~~~ 330 (332)
..+.|-|+..||.++|++++.++..+++
T Consensus 60 ~~V~L~IS~~GI~v~d~~tk~~~~~~~l 87 (160)
T 1p3r_A 60 QRIWVNISLSGIKIIDEKTGVIEHEHPV 87 (160)
T ss_dssp EEEEEEEETTEEEEEETTTCCEEEEECG
T ss_pred CEEEEEEECCeEEEEECCCCeEEEeccc
Confidence 4799999999999999999999886654
No 29
>3so6_A LDL receptor adaptor protein; PTB, endocytic adaptor, autosomal reces hypercholesterolemia, ARH, cholesterol; 1.37A {Rattus norvegicus}
Probab=53.80 E-value=12 Score=29.46 Aligned_cols=29 Identities=17% Similarity=0.261 Sum_probs=25.0
Q ss_pred CceEEEEEecCceEEEcCCCceeeeeecc
Q psy14290 302 PEMLLIAINKHGVSLIHPQTKISLDYKSI 330 (332)
Q Consensus 302 p~~~~LgVn~~Gv~i~~~~~~~~l~~~~~ 330 (332)
+.++.|-|+.+||.++|+++++++..+++
T Consensus 43 ~~~v~L~Vs~~gi~l~d~~~~~~~~~~~i 71 (137)
T 3so6_A 43 LQKVTLKVSPRGIILTDSLTSQLIENVSI 71 (137)
T ss_dssp CEEEEEEEETTEEEEEETTTCCEEEEEEG
T ss_pred CCEEEEEEeCCeEEEEECCCCcEEEeecc
Confidence 35799999999999999999998876654
No 30
>2ej8_A DCC-interacting protein 13 alpha; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.84A {Homo sapiens}
Probab=53.79 E-value=13 Score=30.57 Aligned_cols=28 Identities=18% Similarity=0.189 Sum_probs=24.9
Q ss_pred ceEEEEEecCceEEEcCCCceeeeeecc
Q psy14290 303 EMLLIAINKHGVSLIHPQTKISLDYKSI 330 (332)
Q Consensus 303 ~~~~LgVn~~Gv~i~~~~~~~~l~~~~~ 330 (332)
..+.|-|+..||.++|+.+++++..+++
T Consensus 57 ~~v~L~VS~~gi~l~d~~tk~~~~~~~i 84 (160)
T 2ej8_A 57 TESHLLVTCDCLKLIDPQTQVTRLTFPL 84 (160)
T ss_dssp CEEEEEEESSEEEEECTTTCCEEEEEEG
T ss_pred CEEEEEEECCeEEEEeCCCCeEEEEeeC
Confidence 4699999999999999999998887654
No 31
>1aqc_A X11; PTB domain; 2.30A {Homo sapiens} SCOP: b.55.1.2 PDB: 1x11_A*
Probab=49.44 E-value=15 Score=30.73 Aligned_cols=28 Identities=7% Similarity=0.137 Sum_probs=25.1
Q ss_pred ceEEEEEecCceEEEcCCCceeeeeecc
Q psy14290 303 EMLLIAINKHGVSLIHPQTKISLDYKSI 330 (332)
Q Consensus 303 ~~~~LgVn~~Gv~i~~~~~~~~l~~~~~ 330 (332)
.++.|-|+.+||.++|+++++++...++
T Consensus 64 ~~V~L~IS~~gikv~d~~t~~il~~~~l 91 (172)
T 1aqc_A 64 TEVDLFILTQRIKVLNADTQETMMDHPL 91 (172)
T ss_dssp CEEEEEECSSEEEEEETTTCCEEEEEEG
T ss_pred cEEEEEEECCeEEEEeCCCCceEecccc
Confidence 5899999999999999999999886654
No 32
>2ela_A Adapter protein containing PH domain, PTB domain and leucine zipper motif 1; APPL, cell cycle; 2.00A {Homo sapiens}
Probab=47.84 E-value=16 Score=30.59 Aligned_cols=28 Identities=18% Similarity=0.189 Sum_probs=24.9
Q ss_pred ceEEEEEecCceEEEcCCCceeeeeecc
Q psy14290 303 EMLLIAINKHGVSLIHPQTKISLDYKSI 330 (332)
Q Consensus 303 ~~~~LgVn~~Gv~i~~~~~~~~l~~~~~ 330 (332)
.++.|-|+..||.++|+.+++++..+++
T Consensus 70 ~~V~L~VS~~gI~l~d~~tk~~i~~~~i 97 (175)
T 2ela_A 70 TESHLLVTCDCLKLIDPQTQVTRLTFPL 97 (175)
T ss_dssp EEEEEEECSSEEEEECTTTCCEEEEEEG
T ss_pred CEEEEEEECCeEEEEeCCCCcEEEEeec
Confidence 4699999999999999999998887654
No 33
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=46.56 E-value=19 Score=24.57 Aligned_cols=39 Identities=13% Similarity=0.256 Sum_probs=27.0
Q ss_pred ccceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 127 KRSSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 127 e~s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
....++.|+.|+....+++.-|++.+||++.+ ++...+|
T Consensus 4 ~~~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~~gW 43 (67)
T 2eyx_A 4 NGPIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQ 43 (67)
T ss_dssp TCSCBEEECCCBCCCTTCSSBCCBCSSEEEEEEEECTTSE
T ss_pred CCCEEEEEeEEECCCCCCCCccccCCCCEEEEEEecCCCE
Confidence 34457889999876433667899999999975 4333444
No 34
>3f0w_A NUMB-R, NUMB-like protein; PH domain-like, PID domain, phosphoprotein, signaling protei structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens} PDB: 1wj1_A 2nmb_A* 1ddm_A
Probab=45.35 E-value=18 Score=29.91 Aligned_cols=29 Identities=17% Similarity=0.225 Sum_probs=25.2
Q ss_pred CceEEEEEecCceEEEcCCCceeeeeecc
Q psy14290 302 PEMLLIAINKHGVSLIHPQTKISLDYKSI 330 (332)
Q Consensus 302 p~~~~LgVn~~Gv~i~~~~~~~~l~~~~~ 330 (332)
+.++.|-|+..||.++|+++++++..+++
T Consensus 77 ~~~V~L~VS~~GI~l~d~~t~~~l~~~~i 105 (168)
T 3f0w_A 77 SVKSVLWVSADGLRVVDDKTKDLLVDQTI 105 (168)
T ss_dssp CEEEEEEECSSEEEEEETTTCCEEEEEEG
T ss_pred CcEEEEEEECCEEEEEeCCCCeEEEeeec
Confidence 35799999999999999999998876654
No 35
>4dbb_A Amyloid beta A4 precursor protein-binding family 1; X11S/mints, PTB domain, chimera protein, protein transport; HET: IPA GOL; 1.90A {Rattus norvegicus}
Probab=44.53 E-value=20 Score=29.54 Aligned_cols=28 Identities=7% Similarity=0.170 Sum_probs=24.8
Q ss_pred ceEEEEEecCceEEEcCCCceeeeeecc
Q psy14290 303 EMLLIAINKHGVSLIHPQTKISLDYKSI 330 (332)
Q Consensus 303 ~~~~LgVn~~Gv~i~~~~~~~~l~~~~~ 330 (332)
..+.|-|+..||.++++++++++..+++
T Consensus 53 ~~V~L~IS~~gIkv~d~~t~~~i~~~~l 80 (162)
T 4dbb_A 53 TEVDLFISTQRIKVLNADTQEPMMDHPL 80 (162)
T ss_dssp EEEEEEEESSEEEEEETTTCCEEEEEEG
T ss_pred cEEEEEEECCEEEEEECCCCcEEeeeec
Confidence 5799999999999999999999886654
No 36
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.82 E-value=30 Score=25.04 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=26.9
Q ss_pred ccceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 127 KRSSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 127 e~s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
....++.|++|+....+...-|++.+||+|.+ ++.+.+|
T Consensus 14 ~~~~~~~alydy~~~a~~~~eLsf~~Gd~i~v~~~~~~~W 53 (88)
T 2dbk_A 14 NGPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQ 53 (88)
T ss_dssp CCCEEEEECSCBCCCTTCSSBCCBCTTCEEEEEEECTTSC
T ss_pred CCCEEEEEcccccCCCCCCCcccCCCCCEEEEEEecCCCE
Confidence 45567899999874223566799999999965 4434444
No 37
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=36.79 E-value=30 Score=23.70 Aligned_cols=35 Identities=17% Similarity=0.210 Sum_probs=24.7
Q ss_pred eEEEEeecCCCCCCCeeeeccCCceEEeecCCCce
Q psy14290 131 FVIALQDYKAPGEGSSFLSFHRGDLILLEEGSTGE 165 (332)
Q Consensus 131 f~lal~d~~~~~d~~~~L~~~kgd~iiLeq~~~~~ 165 (332)
.+.|+.++....+++.-|++.+||++.+.+.+.+|
T Consensus 7 ~~~alydy~~~~~~~~eLsf~~Gd~i~v~~~~~~W 41 (70)
T 2vkn_A 7 KAKALYPYDADDDDAYEISFEQNEILQVSDIEGRW 41 (70)
T ss_dssp EEEESSCBCCCSSSTTBCCBCTTCEEEEECTTSSE
T ss_pred EEEECccCCCCCCCCCcccCCCCCEEEEEEcCCCe
Confidence 46888888765445568999999999764433444
No 38
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=36.72 E-value=28 Score=22.78 Aligned_cols=33 Identities=21% Similarity=0.385 Sum_probs=23.1
Q ss_pred eEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 131 FVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 131 f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
++.|+.|+.. ..+.-|++.+||.+.+ ++.+.+|
T Consensus 3 ~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 36 (58)
T 1uti_A 3 WARALYDFEA--LEEDELGFRSGEVVEVLDSSNPSW 36 (58)
T ss_dssp EEEESSCBCC--CSTTBCCBCTTCEEEEEECCSSSE
T ss_pred EEEECccCCC--CCcCCCCCCCCCEEEEEEECCCCE
Confidence 5788888875 4456788999999975 3333444
No 39
>1n3h_A SHC transforming protein; free protein, beta sandwich, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.2 PDB: 1oy2_A 2l1c_A* 1shc_A*
Probab=36.39 E-value=22 Score=30.62 Aligned_cols=28 Identities=7% Similarity=0.209 Sum_probs=24.5
Q ss_pred ceEEEEEecCceEEEcCCCceeeeeecc
Q psy14290 303 EMLLIAINKHGVSLIHPQTKISLDYKSI 330 (332)
Q Consensus 303 ~~~~LgVn~~Gv~i~~~~~~~~l~~~~~ 330 (332)
.++.|-|+..||.++|+++++++..+++
T Consensus 120 ~~V~L~IS~~gIkv~d~~t~~~i~~~~i 147 (207)
T 1n3h_A 120 MPITLTVSTSSLNLMAADCKQIIANHHM 147 (207)
T ss_dssp EEEEEEEETTEEEEEETTTTSCBCCCSC
T ss_pred ceEEEEEECCeEEEEeCCCCceeeeecc
Confidence 5799999999999999999998876544
No 40
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=35.41 E-value=31 Score=23.73 Aligned_cols=35 Identities=26% Similarity=0.382 Sum_probs=24.3
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
..++.|+.|+.. ..+.-|++.+||++.+ ++.+.+|
T Consensus 3 ~~~~~Alydy~~--~~~~eLsf~~Gd~i~v~~~~~~~W 38 (68)
T 2ew3_A 3 QPCCRGLYDFEP--ENQGELGFKEGDIITLTNQIDENW 38 (68)
T ss_dssp CCEEEESSCBCC--CSTTBCCBCTTCEEEEEEESSSSE
T ss_pred CCEEEEeeeECC--CCCCccCCCCCCEEEEEEecCCCE
Confidence 456889999876 4455788999999975 3333444
No 41
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=35.31 E-value=29 Score=24.64 Aligned_cols=30 Identities=33% Similarity=0.660 Sum_probs=23.3
Q ss_pred ccceeEEEEeecCCCCCCCeeeeccCCceEEe
Q psy14290 127 KRSSFVIALQDYKAPGEGSSFLSFHRGDLILL 158 (332)
Q Consensus 127 e~s~f~lal~d~~~~~d~~~~L~~~kgd~iiL 158 (332)
+...++.|++|+.. ....-|++.+||+|.+
T Consensus 8 ~~~~~~~alydy~~--~~~~eLsf~~Gd~i~v 37 (80)
T 2i0n_A 8 EFAKYARALKDYNV--SDTSLLPFKRNDIITI 37 (80)
T ss_dssp CCCCEEEESSCBCC--CSSSSCCBCSSEEEEE
T ss_pred CCCeEEEECCCCCc--CCCCCcCCCCCCEEEE
Confidence 35567899999876 4556688999999975
No 42
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=34.35 E-value=41 Score=27.51 Aligned_cols=29 Identities=24% Similarity=0.442 Sum_probs=26.2
Q ss_pred ceEEEEEecCceEEEcCCCceeeeeeccc
Q psy14290 303 EMLLIAINKHGVSLIHPQTKISLDYKSIS 331 (332)
Q Consensus 303 ~~~~LgVn~~Gv~i~~~~~~~~l~~~~~~ 331 (332)
.+++|=|+..+|.++|+.++..|..+++.
T Consensus 55 q~~~L~v~~~tlrLvD~~tk~~L~~~pI~ 83 (148)
T 3d8d_A 55 KDLLLQLEDETLKLVEPQSQALLHAQPII 83 (148)
T ss_dssp CEEEEEEETTEEEEECTTTCCEEEEEEGG
T ss_pred ceEEEEEcCCeEEEecCCCCceEEEeeEE
Confidence 47999999999999999999999988763
No 43
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=32.90 E-value=36 Score=22.74 Aligned_cols=36 Identities=25% Similarity=0.318 Sum_probs=24.9
Q ss_pred cceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 128 RSSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 128 ~s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
...++.|+.|+.. ..+.-|++.+||++.+ ++...+|
T Consensus 5 ~~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 41 (64)
T 2ak5_A 5 SQLVVRAKFNFQQ--TNEDELSFSKGDVIHVTRVEEGGW 41 (64)
T ss_dssp CCCEEEESSCBCC--CSTTBCCBCTTCEEEEEECCTTSE
T ss_pred CCEEEEEccccCC--cCcCcccCCCCCEEEEeEecCCCE
Confidence 4457889999876 4456788999999975 3333444
No 44
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=32.87 E-value=35 Score=22.65 Aligned_cols=35 Identities=29% Similarity=0.428 Sum_probs=24.5
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEeecCCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILLEEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiLeq~~~~~ 165 (332)
..++.|+.|+.. ..+.-|++.+||.+.+.....+|
T Consensus 6 ~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~W 40 (62)
T 2iim_A 6 DNLVIALHSYEP--SHDGDLGFEKGEQLRILEQSGEW 40 (62)
T ss_dssp TCEEEESSCBCC--CSTTBCCBCTTCEEEEEECCSSE
T ss_pred CcEEEEcccCCC--CCCCCcCCCCCCEEEEEEcCCCE
Confidence 457889999876 45567889999999764333344
No 45
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=32.73 E-value=39 Score=22.45 Aligned_cols=29 Identities=34% Similarity=0.478 Sum_probs=22.1
Q ss_pred cceeEEEEeecCCCCCCCeeeeccCCceEEe
Q psy14290 128 RSSFVIALQDYKAPGEGSSFLSFHRGDLILL 158 (332)
Q Consensus 128 ~s~f~lal~d~~~~~d~~~~L~~~kgd~iiL 158 (332)
...++.|+.|+... .+.-|++.+||++.+
T Consensus 4 ~~~~~~al~dy~~~--~~~eLs~~~Gd~i~v 32 (62)
T 1uj0_A 4 MARRVRALYDFEAV--EDNELTFKHGELITV 32 (62)
T ss_dssp CCEEEEESSCBCCC--STTBCCBCTTCEEEE
T ss_pred CCeEEEECccCCCC--CcCCcCCCCCCEEEE
Confidence 45678899998763 445688999999975
No 46
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=32.01 E-value=37 Score=23.08 Aligned_cols=33 Identities=18% Similarity=0.320 Sum_probs=22.9
Q ss_pred eEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 131 FVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 131 f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
++.|+.|+.. ..+.-|++.+||++.+ ++.+.+|
T Consensus 3 ~~~alydy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 36 (65)
T 2nwm_A 3 AARLKFDFQA--QSPKELTLQKGDIVYIHKEVDKNW 36 (65)
T ss_dssp EEEECSCBCC--CSTTBCCBCTTCEEEEEECCTTTC
T ss_pred EEEEeeeECC--CCcCccCCcCCCEEEEEEecCCCE
Confidence 5788888876 4455688999999976 3333444
No 47
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=31.49 E-value=41 Score=21.95 Aligned_cols=27 Identities=26% Similarity=0.438 Sum_probs=20.8
Q ss_pred eeEEEEeecCCCCCCCeeeeccCCceEEe
Q psy14290 130 SFVIALQDYKAPGEGSSFLSFHRGDLILL 158 (332)
Q Consensus 130 ~f~lal~d~~~~~d~~~~L~~~kgd~iiL 158 (332)
.++.|+.|+.. ..+.-|++.+||++.+
T Consensus 3 ~~~~al~dy~~--~~~~eLs~~~Gd~i~v 29 (58)
T 1zx6_A 3 EYVEALYQFDP--QQDGDLGLKPGDKVQL 29 (58)
T ss_dssp CEEEECSCBCC--CSTTBCCBCTTCEEEE
T ss_pred eEEEECceECC--CCCCCccCCCCCEEEE
Confidence 36788888875 4556788999999975
No 48
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.47 E-value=27 Score=25.04 Aligned_cols=31 Identities=55% Similarity=0.845 Sum_probs=24.4
Q ss_pred ccceeEEEEeecCCCCCCCeeeeccCCceEEee
Q psy14290 127 KRSSFVIALQDYKAPGEGSSFLSFHRGDLILLE 159 (332)
Q Consensus 127 e~s~f~lal~d~~~~~d~~~~L~~~kgd~iiLe 159 (332)
++..++.|++|+.. ..+.-|++.+||+|.+.
T Consensus 6 ~~~~~~~al~dy~~--~~~~eLsf~~Gd~i~v~ 36 (85)
T 2dlp_A 6 SGSGYVIALRSYIT--DNCSLLSFHRGDLIKLL 36 (85)
T ss_dssp SCCCEEEESSCBCC--SSSSBCCBCTTCEEEEC
T ss_pred cCCEEEEECCCCCc--cCcCCccCcCCCEEEEE
Confidence 45678999999876 45567889999999763
No 49
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=31.21 E-value=31 Score=23.36 Aligned_cols=31 Identities=39% Similarity=0.420 Sum_probs=22.9
Q ss_pred cceeEEEEeecCCCCCCCeeeeccCCceEEee
Q psy14290 128 RSSFVIALQDYKAPGEGSSFLSFHRGDLILLE 159 (332)
Q Consensus 128 ~s~f~lal~d~~~~~d~~~~L~~~kgd~iiLe 159 (332)
...++.|++|+... +..-.|++.+||+|.+.
T Consensus 6 ~~~~~~al~dy~~~-~~~e~Lsf~~Gd~i~v~ 36 (67)
T 3rnj_A 6 GRMRVKAIFSHAAG-DNSTLLSFKEGDLITLL 36 (67)
T ss_dssp CCCEEEESSCBCCC-SCTTBCCBCTTCEEEEC
T ss_pred CCeEEEEccccCCC-CCCCCccCCCCCEEEEe
Confidence 44578999998753 33446889999999764
No 50
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=30.83 E-value=43 Score=23.49 Aligned_cols=37 Identities=30% Similarity=0.455 Sum_probs=25.9
Q ss_pred ccceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 127 KRSSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 127 e~s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
+...++.|++|+.. ..+.-|++.+||++.+ ++...+|
T Consensus 5 ~~~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~gW 42 (80)
T 1ue9_A 5 SSGEIAQVTSAYVA--SGSEQLSLAPGQLILILKKNTSGW 42 (80)
T ss_dssp SCCEEEEECSCCCC--CSTTBCCCCTTCEEEEEEECSSSE
T ss_pred CCCeEEEECcccCC--CCCCCCCCCCCCEEEEEEecCCCc
Confidence 34557899999876 4556688999999965 4334454
No 51
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=30.34 E-value=41 Score=22.83 Aligned_cols=34 Identities=21% Similarity=0.200 Sum_probs=23.8
Q ss_pred eeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 130 SFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 130 ~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
..+.|++|+.. ..+.-|++.+||++.+ ++.+.+|
T Consensus 8 ~~~~Alydy~~--~~~~eLsf~~Gd~i~v~~~~~~~W 42 (68)
T 1tg0_A 8 FKVVAQFPYKS--DYEDDLNFEKDQEIIVTSVEDAEW 42 (68)
T ss_dssp EEEEESSCBCC--SCTTBCCBCTTCEEEEEEECSSSE
T ss_pred EEEEECeeECc--CCcCCCCCCCCCEEEEEEecCCCe
Confidence 35789999876 4455688999999975 3334444
No 52
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=29.62 E-value=48 Score=22.01 Aligned_cols=33 Identities=24% Similarity=0.500 Sum_probs=23.3
Q ss_pred eEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 131 FVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 131 f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
++.|+.|+.. ..+.-|++.+||++.+ ++...+|
T Consensus 3 ~~~alydy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 36 (65)
T 2oaw_A 3 LVLALYDYQE--KSPREVTMKKGDILTLLNSTNKDW 36 (65)
T ss_dssp EEEECSCBCC--SSTTBCCBCTTCEEEEEECCSSSE
T ss_pred EEEEcccCCc--cCCCCCCCCCCCEEEEEEcCCCCE
Confidence 5788998875 4455688999999975 4334444
No 53
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=29.50 E-value=48 Score=22.05 Aligned_cols=30 Identities=23% Similarity=0.426 Sum_probs=23.0
Q ss_pred cceeEEEEeecCCCCCCCeeeeccCCceEEee
Q psy14290 128 RSSFVIALQDYKAPGEGSSFLSFHRGDLILLE 159 (332)
Q Consensus 128 ~s~f~lal~d~~~~~d~~~~L~~~kgd~iiLe 159 (332)
...++.|+.|+.. ..+.-|++.+||++.+.
T Consensus 5 ~~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~ 34 (64)
T 2jte_A 5 AKEYCRTLFPYTG--TNEDELTFREGEIIHLI 34 (64)
T ss_dssp SSEEEEESSCBCC--SSSSBCCBCTTCEEEEE
T ss_pred CCEEEEECccCCc--cCCCccCCCCCCEEEEE
Confidence 3457889999876 45567889999999763
No 54
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=29.44 E-value=43 Score=22.03 Aligned_cols=35 Identities=26% Similarity=0.271 Sum_probs=23.7
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
...+.|+.|+... .+.-|++.+||.+.+ ++.+.+|
T Consensus 4 ~~~~~al~dy~~~--~~~eLs~~~Gd~i~v~~~~~~~W 39 (60)
T 1w70_A 4 HMRAEALFDFTGN--SKLELNFKAGDVIFLLSRINKDW 39 (60)
T ss_dssp SCEEEESSCBCCS--STTBCCBCTTCEEEEEEECSSSE
T ss_pred CcEEEECccCCcC--CCCCccCCCCCEEEEEEeCCCCe
Confidence 3468899998763 344588999999975 3333444
No 55
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=29.03 E-value=47 Score=22.06 Aligned_cols=35 Identities=23% Similarity=0.457 Sum_probs=23.8
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
...+.|++|+..+ .+.-|++.+||++.+ ++.+.+|
T Consensus 21 ~~~~~alydy~a~--~~~eLsf~~Gd~i~v~~~~~~~W 56 (62)
T 1g2b_A 21 KELVLALYDYQEK--SPREVTMKKGDILTLLNSTNKDW 56 (62)
T ss_dssp SCEEEECSCBCCS--STTBCCBCTTCEEEEEECCSSSE
T ss_pred ceEEEEeeeECCC--CCCccCCCCCCEEEEEEecCCCE
Confidence 3468899998763 344688899999965 4333444
No 56
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=28.90 E-value=44 Score=21.64 Aligned_cols=33 Identities=24% Similarity=0.478 Sum_probs=22.4
Q ss_pred eEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 131 FVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 131 f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
++.|+.|+.. ..+.-|++.+||++.+ ++.+.+|
T Consensus 3 ~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 36 (57)
T 1cka_A 3 YVRALFDFNG--NDEEDLPFKKGDILRIRDKPEEQW 36 (57)
T ss_dssp EEEESSCBCC--SSTTBCCBCTTCEEEEEECSSSSE
T ss_pred EEEECCcCCC--CCCCCCCCCCCCEEEEEEecCCCc
Confidence 5678888875 3445688999999975 3333444
No 57
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=28.83 E-value=43 Score=22.67 Aligned_cols=34 Identities=24% Similarity=0.466 Sum_probs=23.3
Q ss_pred eeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 130 SFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 130 ~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
.++.|+.|+.. ..+.-|++.+||++.+ ++.+.+|
T Consensus 4 ~~~~Alydy~~--~~~~eLsf~~Gd~i~v~~~~~~~W 38 (65)
T 1b07_A 4 EYVRALFDFNG--NDEEDLPFKKGDILRIRDKPEEQW 38 (65)
T ss_dssp CEEEESSCBCC--SSTTBCCBCTTCEEEEEECSSSSE
T ss_pred eEEEECCcCCC--CCCCccCCcCCCEEEEEEecCCCe
Confidence 35788888876 3445688999999975 4333444
No 58
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=28.13 E-value=46 Score=21.58 Aligned_cols=28 Identities=46% Similarity=0.684 Sum_probs=21.1
Q ss_pred eeEEEEeecCCCCCCCeeeeccCCceEEee
Q psy14290 130 SFVIALQDYKAPGEGSSFLSFHRGDLILLE 159 (332)
Q Consensus 130 ~f~lal~d~~~~~d~~~~L~~~kgd~iiLe 159 (332)
.++.|+.|+.. ..+.-|++.+||++.+.
T Consensus 3 ~~~~al~dy~~--~~~~eLs~~~Gd~i~v~ 30 (58)
T 1sem_A 3 KFVQALFDFNP--QESGELAFKRGDVITLI 30 (58)
T ss_dssp CEEEESSCBCC--SSTTBCCBCTTCEEEEE
T ss_pred eEEEECcCCCC--CCCCCcCCCCCCEEEEE
Confidence 35788888875 44567889999999753
No 59
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=27.71 E-value=43 Score=21.83 Aligned_cols=32 Identities=28% Similarity=0.209 Sum_probs=21.6
Q ss_pred EEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 132 VIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 132 ~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
+.|+.|+.. ..+.-|++.+||++.+ ++.+.+|
T Consensus 3 ~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 35 (58)
T 1jo8_A 3 ATAEYDYDA--AEDNELTFVENDKIINIEFVDDDW 35 (58)
T ss_dssp EEESSCBCC--CSTTBCCBCTTCEEEEEECCSSSE
T ss_pred EEECceECC--CCCCCcccCCCCEEEEEEecCCCc
Confidence 567888775 4455688999999975 3333444
No 60
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=27.68 E-value=44 Score=21.84 Aligned_cols=34 Identities=29% Similarity=0.379 Sum_probs=23.6
Q ss_pred eeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 130 SFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 130 ~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
..+.|+.|+.. ..+.-|++.+||++.+ ++.+.+|
T Consensus 5 ~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 39 (59)
T 2g6f_X 5 SVVRAKFNFQQ--TNEDELSFSKGDVIHVTRVEEGGW 39 (59)
T ss_dssp CEEEESSCBCC--SSTTBCCBCTTCEEEEEEECTTSE
T ss_pred cEEEECceeCC--CCcCCcCCCCCCEEEEEEecCCCE
Confidence 35788888875 4556788999999975 3333444
No 61
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=27.65 E-value=46 Score=22.00 Aligned_cols=34 Identities=12% Similarity=0.026 Sum_probs=23.2
Q ss_pred eeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 130 SFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 130 ~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
..+.|+.++.. ..+.-|++.+||++.+ ++.+.+|
T Consensus 4 ~~~~al~~y~~--~~~~eLs~~~Gd~i~v~~~~~~~W 38 (62)
T 2fpe_A 4 QTHRAIFRFVP--RHEDELELEVDDPLLVELQAEDYW 38 (62)
T ss_dssp CCEEECSCBCC--SSTTBCCBCTTCEEEEEEECTTSE
T ss_pred CEEEECccCCc--cCcCcCcCCCCCEEEEEEecCCCE
Confidence 45788888876 3445688899999975 4333444
No 62
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=27.57 E-value=48 Score=22.41 Aligned_cols=35 Identities=29% Similarity=0.430 Sum_probs=24.4
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
..++.|++|+.. ..+.-|++.+||++.+ ++.+.+|
T Consensus 7 ~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 42 (68)
T 2djq_A 7 GPRAKALCNYRG--KNPGDLKFNKGDVILLRRQLDENW 42 (68)
T ss_dssp CCEEEECSCCCS--CCTTCCCCCTTCEEEEEECCCSSE
T ss_pred ceEEEECCCCCC--CCcCCccCCCCCEEEEEEecCCCE
Confidence 346889999875 4455788999999975 3333444
No 63
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=27.18 E-value=42 Score=22.74 Aligned_cols=35 Identities=20% Similarity=0.311 Sum_probs=23.4
Q ss_pred eEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 131 FVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 131 f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
++.|++++....+.+.-|++.+||+|.+ ++...+|
T Consensus 3 ~~~al~dy~~~~~~~~eLsf~~Gd~i~v~~~~~~~W 38 (67)
T 2bzy_A 3 FAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQ 38 (67)
T ss_dssp EEEECSCBCSEEECTTBCCBCTTCEEEEEEECSSSE
T ss_pred EEEEeeeECCCCCCCCccccCCCCEEEEEEecCCCe
Confidence 5678888865212566889999999975 3333444
No 64
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=27.16 E-value=49 Score=21.72 Aligned_cols=35 Identities=34% Similarity=0.444 Sum_probs=24.1
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
...+.|+.|+.. ..+.-|++.+||++.+ ++.+.+|
T Consensus 5 ~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 40 (60)
T 2xmf_A 5 SPQCKALYAYDA--QDTDELSFNANDIIDIIKEDPSGW 40 (60)
T ss_dssp SCEEEESSCBCC--SSTTBCCBCTTCEEEEEEECTTSE
T ss_pred CcEEEECccCCc--CCcCCcCCCCCCEEEEEEecCCCE
Confidence 346788988876 4456788999999975 3333444
No 65
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=27.15 E-value=50 Score=21.41 Aligned_cols=27 Identities=37% Similarity=0.628 Sum_probs=20.4
Q ss_pred eEEEEeecCCCCCCCeeeeccCCceEEee
Q psy14290 131 FVIALQDYKAPGEGSSFLSFHRGDLILLE 159 (332)
Q Consensus 131 f~lal~d~~~~~d~~~~L~~~kgd~iiLe 159 (332)
++.|+.|+.. ..+.-|++.+||++.+.
T Consensus 4 ~~~al~dy~~--~~~~eLs~~~Gd~i~v~ 30 (58)
T 2vwf_A 4 YVQALFDFDP--QEDGELGFRRGDFIHVM 30 (58)
T ss_dssp EEEESSCBCC--CSTTBCCBCTTCEEEEE
T ss_pred EEEECceECC--CCcCCcCCCCCCEEEEE
Confidence 5778888875 34557889999999753
No 66
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=27.13 E-value=1e+02 Score=27.80 Aligned_cols=87 Identities=7% Similarity=0.010 Sum_probs=47.9
Q ss_pred hhhhccccC-----------CCc--cccceeeeecCCcccccceecccccc-ccccccceeEEeccCCccce--eeeec-
Q psy14290 38 EAWTNHRST-----------GKD--RTADLIFHFHPGIAQVTASYHKCSRK-RLQVSAPLVIECASGESKQE--HRPIP- 100 (332)
Q Consensus 38 ~~w~~~~~~-----------~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~tl~- 100 (332)
+.|+.|.+. |++ .-.=+|++.++|+-. |.+-++. .+.+.+.++. ...+.+... +.+.+
T Consensus 216 ~~lp~yG~~~f~v~~~~~~~g~~~~~~~~~LgV~~~Gv~v----~~~~tk~~l~~~~~~~is-w~~s~~~~~f~i~~~~~ 290 (322)
T 4dxa_B 216 WEIPTYGAAFFTGQIFTKASPSNHKVIPVYVGVNIKGLHL----LNMETKALLISLKYGCFM-WQLGDTDTCFQIHSMEN 290 (322)
T ss_dssp HTSTTTTCEEEEEEEECC-------EEEEEEEECSSEEEE----EETTTCCEEEEEETTSEE-EEECSSTTEEEEEESSS
T ss_pred hcCCCcCeEEEEEEEeccCCCCccCCCeEEEEEccCceEE----EcCCCceeeeccccceeE-EeecCCCCEEEEEECCC
Confidence 578888776 101 112467778887764 3332332 2223444432 221112221 22222
Q ss_pred CCeEEEEcCChhhHHHHHHHHHHhhcccc
Q psy14290 101 GEEFTFQSPNAEDIRDLVVYFLEGLKKRS 129 (332)
Q Consensus 101 g~~~~l~~~~a~~~~elV~~~l~gL~e~s 129 (332)
+..+.+.++.|..+.++|..++++|++++
T Consensus 291 ~~~~~~~t~q~~~i~~li~~~~~~~~~~~ 319 (322)
T 4dxa_B 291 KMSFIVHTKQAGLVVKLLMKLNGQLMPTE 319 (322)
T ss_dssp CCEEEEECTTHHHHHHHHHHHHHTC----
T ss_pred CccEEEEeCcHHHHHHHHHHHHHHHhhhh
Confidence 44799999999999999999999998775
No 67
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=26.78 E-value=55 Score=23.01 Aligned_cols=34 Identities=24% Similarity=0.487 Sum_probs=23.6
Q ss_pred eeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 130 SFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 130 ~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
.++.|+.|+.. ....-|++.+||++.+ ++.+.+|
T Consensus 3 ~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 37 (80)
T 2pqh_A 3 ELVLALYDYQE--KSPREVTMKKGDILTLLNSTNKDW 37 (80)
T ss_dssp EEEEECSCBCC--CSTTBCCBCTTCEEEEEECCSSSE
T ss_pred eEEEECccCCC--CCCCccCCCCCCEEEEEEecCCCE
Confidence 35788999876 4455788999999975 3333444
No 68
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=26.77 E-value=45 Score=21.72 Aligned_cols=32 Identities=25% Similarity=0.327 Sum_probs=21.8
Q ss_pred EEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 132 VIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 132 ~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
++|++|+.. ..+.-|++.+||++.+ ++...+|
T Consensus 4 ~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 36 (58)
T 2bz8_A 4 AIVEFDYQA--QHDDELTISVGEIITNIRKEDGGW 36 (58)
T ss_dssp EEESSCBCC--CSTTBCCBCTTCEEEEEECCTTTE
T ss_pred EEECcccCC--CCcCEeeECCCCEEEEEEeCCCCE
Confidence 567888765 4456788999999975 4333444
No 69
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=26.77 E-value=37 Score=22.51 Aligned_cols=29 Identities=41% Similarity=0.584 Sum_probs=22.3
Q ss_pred cceeEEEEeecCCCCCCCeeeeccCCceEEe
Q psy14290 128 RSSFVIALQDYKAPGEGSSFLSFHRGDLILL 158 (332)
Q Consensus 128 ~s~f~lal~d~~~~~d~~~~L~~~kgd~iiL 158 (332)
...++.|+.|+.. ..+.-|++.+||++.+
T Consensus 4 ~~~~~~al~dy~~--~~~~eLs~~~Gd~i~v 32 (62)
T 1k4u_S 4 KGSQVEALFSYEA--TQPEDLEFQEGDIILV 32 (62)
T ss_dssp CCEEEECCSCBCC--CSSSBCCBCSSCEEEE
T ss_pred CCeEEEECCCCCc--CCCCCccCCCCCEEEE
Confidence 3457889999876 4455788999999975
No 70
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=26.73 E-value=46 Score=21.96 Aligned_cols=33 Identities=36% Similarity=0.416 Sum_probs=22.8
Q ss_pred eEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 131 FVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 131 f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
.+.|+.|+.. ..+.-|++.+||++.+ ++...+|
T Consensus 5 ~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 38 (61)
T 1y0m_A 5 AVKALFDYKA--QREDELTFTKSAIIQNVEKQDGGW 38 (61)
T ss_dssp CEEESSCBCC--CSTTBCCBCTTCEEEEEECCSSSE
T ss_pred EEEECcCCCc--CCCCCcCCcCCCEEEEEEecCCCE
Confidence 5788888875 4455788999999975 4333444
No 71
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=26.62 E-value=54 Score=22.05 Aligned_cols=28 Identities=25% Similarity=0.411 Sum_probs=21.3
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEe
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILL 158 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiL 158 (332)
...+.|++|+.. ..+.-|++.+||++.+
T Consensus 6 ~~~~~al~dy~~--~~~~eLs~~~Gd~i~v 33 (67)
T 2o9s_A 6 TGEAIAKFNFNG--DTQVEMSFRKGERITL 33 (67)
T ss_dssp SEEEEECSCBCC--SSTTBCCBCTTCEEEE
T ss_pred CEEEEECccCCc--CCcCccCCCCCCEEEE
Confidence 345789999876 4455688999999975
No 72
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=25.87 E-value=36 Score=22.97 Aligned_cols=33 Identities=27% Similarity=0.346 Sum_probs=23.7
Q ss_pred cccceeEEEEeecCCCCCCCeeeeccCCceEEee
Q psy14290 126 KKRSSFVIALQDYKAPGEGSSFLSFHRGDLILLE 159 (332)
Q Consensus 126 ~e~s~f~lal~d~~~~~d~~~~L~~~kgd~iiLe 159 (332)
+....++.|+.|+... ..+.-|++.+||++.+.
T Consensus 3 ~~~~~~~~al~dy~a~-~~~~eLs~~~Gd~i~v~ 35 (67)
T 2kxc_A 3 HMKKQKVKTIFPHTAG-SNKTLLSFAQGDVITLL 35 (67)
T ss_dssp SCCCCEEEESSCBCCS-SCSSBCCBCTTCEEEES
T ss_pred CCCCEEEEEeecCCCC-CCCCCCcCCCCCEEEEe
Confidence 3445678999998731 34567889999999764
No 73
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=25.55 E-value=56 Score=21.69 Aligned_cols=37 Identities=35% Similarity=0.382 Sum_probs=24.9
Q ss_pred ccceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 127 KRSSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 127 e~s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
.....+.|++|+.. ..+.-|++.+||++.+ ++.+.+|
T Consensus 7 ~~~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 44 (65)
T 3ulr_B 7 DLGITAIALYDYQA--AGDDEISFDPDDIITNIEMIDDGW 44 (65)
T ss_dssp SCCSCEEECSCBCC--CSTTBCCBCTTCEEEEEECCSSSE
T ss_pred CCceEEEEEeeECC--CCcCEeeEecCCEEEEEEecCCCE
Confidence 34456889999876 3445688999999965 4333344
No 74
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=25.40 E-value=49 Score=22.88 Aligned_cols=35 Identities=31% Similarity=0.492 Sum_probs=24.2
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEeec-CCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILLEE-GSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiLeq-~~~~~ 165 (332)
..++.|++|+... .+.-|++.+||++.+.+ ...+|
T Consensus 7 ~~~~~alydy~~~--~~~eLs~~~Gd~i~v~~~~~~~W 42 (77)
T 2d8j_A 7 GQYFVALFDYQAR--TAEDLSFRAGDKLQVLDTSHEGW 42 (77)
T ss_dssp CEEEEESSCBCCS--SSSBCCBCTTCCEEEEECCSSSE
T ss_pred CCEEEEccCCCCC--CCCccCCCCCCEEEEEECCCCCe
Confidence 3478999998763 34468899999997633 34444
No 75
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=25.29 E-value=56 Score=22.47 Aligned_cols=29 Identities=38% Similarity=0.539 Sum_probs=22.7
Q ss_pred cceeEEEEeecCCCCCCCeeeeccCCceEEe
Q psy14290 128 RSSFVIALQDYKAPGEGSSFLSFHRGDLILL 158 (332)
Q Consensus 128 ~s~f~lal~d~~~~~d~~~~L~~~kgd~iiL 158 (332)
...++.|+.|+.. ..+.-|++.+||++.+
T Consensus 12 ~~~~~~al~dy~~--~~~~eLs~~~Gd~i~v 40 (73)
T 3c0c_A 12 DQPSCKALYDFEP--ENDGELGFREGDLITL 40 (73)
T ss_dssp CSCEEEESSCBCC--SSTTBCCBCTTCEEEE
T ss_pred CCeEEEECccCCC--CCCCCccCcCCCEEEE
Confidence 4567899999876 4455788999999975
No 76
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.06 E-value=55 Score=22.14 Aligned_cols=30 Identities=23% Similarity=0.344 Sum_probs=22.4
Q ss_pred cceeEEEEeecCCCCCCCeeeeccCCceEEee
Q psy14290 128 RSSFVIALQDYKAPGEGSSFLSFHRGDLILLE 159 (332)
Q Consensus 128 ~s~f~lal~d~~~~~d~~~~L~~~kgd~iiLe 159 (332)
....+.|++|+.. ..+.-|++.+||++.+.
T Consensus 6 ~~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~ 35 (68)
T 2dl4_A 6 SGNTYVALYKFVP--QENEDLEMRPGDIITLL 35 (68)
T ss_dssp CCCEEEESSCCCC--SSTTBCCCCTTCEEEEE
T ss_pred CCCEEEEeeeECC--CCcCCcCCCCCCEEEEE
Confidence 3456889999876 44567889999999753
No 77
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=24.88 E-value=51 Score=22.60 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=23.7
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEeecCCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILLEEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiLeq~~~~~ 165 (332)
..++.|+.|+.. ..+.-|++.+||++.+-+.+.+|
T Consensus 4 ~~~~~Alydy~a--~~~~ELsf~~Gd~i~vl~~~~~W 38 (67)
T 2b86_A 4 EVIVIAKWDYTA--QQDQELDIKKNERLWLLDDSKTW 38 (67)
T ss_dssp CEEEEESSCBCC--SSTTSCCBCTTCEEEEEECSSSS
T ss_pred CeEEEEeeeECC--CCCCccccCCCCEEEEEecCCCe
Confidence 346889999876 34456888999999753323343
No 78
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.82 E-value=68 Score=22.39 Aligned_cols=35 Identities=29% Similarity=0.484 Sum_probs=24.4
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
..++.|+.|+.. ..+.-|++.+||+|.+ ++...+|
T Consensus 17 ~~~~~al~dy~~--~~~~eLsf~~Gd~i~v~~~~~~gW 52 (78)
T 2ed0_A 17 LEKVVAIYDYTK--DKEDELSFQEGAIIYVIKKNDDGW 52 (78)
T ss_dssp SEEEEECSCBCC--SSTTBCCBCSSCEEEEEEECSSSE
T ss_pred CEEEEECccCCc--cCcCcccccCCCEEEEEEeCCCCE
Confidence 346889999876 4455788999999975 3333444
No 79
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=24.75 E-value=76 Score=21.92 Aligned_cols=36 Identities=17% Similarity=0.290 Sum_probs=24.3
Q ss_pred eeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 130 SFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 130 ~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
..+.|++|+......+.-|++.+||+|.+ ++...+|
T Consensus 10 ~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~~gW 46 (73)
T 2ebp_A 10 GRARVHTDFTPSPYDTDSLKLKKGDIIDIISKPPMGT 46 (73)
T ss_dssp EEEEECSCBCCCTTCCSBCCBCSSCEEEEEECCSSSC
T ss_pred eEEEEeeccCCCCCCCCccCCCCCCEEEEEEeCCCCe
Confidence 46789999875213566788999999965 4333444
No 80
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=24.57 E-value=49 Score=22.65 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=22.6
Q ss_pred EEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 132 VIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 132 ~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
+.|+.|+.. ..+.-|++.+||++.+ ++.+.+|
T Consensus 9 ~~Alydy~a--~~~~ELs~~~Gd~i~v~~~~~~gW 41 (65)
T 2lj0_A 9 YQALYSYIP--QNDDELELRDGDIVDVMEKCDDGW 41 (65)
T ss_dssp EEESSCBCC--SSTTBCCBCTTCEEEEEEECTTSE
T ss_pred EEEceeECC--CCcCCcCCCCCCEEEEeEeCCCCE
Confidence 578888876 4455689999999965 4444454
No 81
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=24.33 E-value=56 Score=22.28 Aligned_cols=36 Identities=11% Similarity=0.032 Sum_probs=24.7
Q ss_pred cceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 128 RSSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 128 ~s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
+...+.|+.++.. ..+.-|++.+||++.+ ++...+|
T Consensus 5 ~~~~~~al~~y~~--~~~~eLs~~~Gd~i~v~~~~~~gW 41 (71)
T 2fpf_A 5 HEQTHRAIFRFVP--RHEDELELEVDDPLLVELQAEDYW 41 (71)
T ss_dssp CCCCEEECSCBCC--SSTTBCCBCTTCEEEEEEECTTSE
T ss_pred cCeEEEECeeECc--cCCCcccCcCCcEEEEeEecCCCE
Confidence 4456889999876 3445688899999975 4334444
No 82
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=24.06 E-value=64 Score=20.84 Aligned_cols=34 Identities=35% Similarity=0.520 Sum_probs=23.0
Q ss_pred eeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 130 SFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 130 ~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
..+.|+.|+.. ..+.-|++.+||.+.+ ++...+|
T Consensus 4 ~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 38 (58)
T 2drm_A 4 IQVKALYDYDA--QTGDELTFKEGDTIIVHQKDPAGW 38 (58)
T ss_dssp EEEEESSCBCC--CSTTBCCBCTTCEEEEEECCTTSE
T ss_pred cEEEECccCCC--CCcCCcCCCCCCEEEEEEecCCCE
Confidence 35788888876 3445688999999975 3333444
No 83
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=23.93 E-value=69 Score=21.89 Aligned_cols=30 Identities=20% Similarity=0.427 Sum_probs=23.1
Q ss_pred cceeEEEEeecCCCCCCCeeeeccCCceEEee
Q psy14290 128 RSSFVIALQDYKAPGEGSSFLSFHRGDLILLE 159 (332)
Q Consensus 128 ~s~f~lal~d~~~~~d~~~~L~~~kgd~iiLe 159 (332)
...++.|+.|+.. ..+.-|++.+||++.+.
T Consensus 8 ~~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~ 37 (73)
T 2k9g_A 8 SKDYCKVIFPYEA--QNDDELTIKEGDIVTLI 37 (73)
T ss_dssp SCEEEEECSCBCC--SSTTBCCBCTTCEEEEE
T ss_pred CccEEEECccCCC--CCCCeeeECCCCEEEEE
Confidence 4557899999876 45567889999999763
No 84
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=23.62 E-value=63 Score=21.89 Aligned_cols=35 Identities=26% Similarity=0.296 Sum_probs=24.2
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEeecCCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILLEEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiLeq~~~~~ 165 (332)
..++.|+.|+.. ..+.-|++.+||.+.+.+.+.+|
T Consensus 8 ~~~~~alydy~~--~~~~eLs~~~Gd~i~v~~~~~~W 42 (68)
T 2k2m_A 8 LKWVLCNYDFQA--RNSSELSVKQRDVLEVLDDSRKW 42 (68)
T ss_dssp CCEEEESSCBCC--CSSSBCCBCTTCEEEEEECSSSE
T ss_pred CEEEEECccCCC--CCCCcccCCCCCEEEEEEcCCCe
Confidence 346889999876 44557888999999764333444
No 85
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=23.50 E-value=58 Score=22.60 Aligned_cols=36 Identities=19% Similarity=0.314 Sum_probs=25.2
Q ss_pred cceeEEEEeecCCCCCCCeeeeccCCceEEeec-CCCce
Q psy14290 128 RSSFVIALQDYKAPGEGSSFLSFHRGDLILLEE-GSTGE 165 (332)
Q Consensus 128 ~s~f~lal~d~~~~~d~~~~L~~~kgd~iiLeq-~~~~~ 165 (332)
...++.|++|+.. ..+.-|++.+||+|.+.+ .+.+|
T Consensus 9 ~~~~~~alydy~~--~~~~eLsf~~Gd~i~v~~~~~~~W 45 (76)
T 2ed1_A 9 KVRRVKTIYDCQA--DNDDELTFIEGEVIIVTGEEDQEW 45 (76)
T ss_dssp CCEEEEESSCCCC--SSSSBCCCCSSCEEEESSCCSSSE
T ss_pred CCeEEEECccCCC--CCcCCcCcCCCCEEEEEEecCCCE
Confidence 3457899999876 445578899999997633 33444
No 86
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.41 E-value=64 Score=21.79 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=24.4
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
..++.|++|+.. ..+.-|++.+||++.+ ++...+|
T Consensus 7 ~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 42 (68)
T 2dmo_A 7 GEAHRVLFGFVP--ETKEELQVMPGNIVFVLKKGNDNW 42 (68)
T ss_dssp SEEEEECSSCCC--CSSSSCCCCTTCEEEECEECSSSC
T ss_pred CCEEEECcCCCc--CCcCCCCCCCCCEEEEEEeCCCCE
Confidence 457899999876 3445688999999975 3333444
No 87
>3dxe_A Amyloid beta A4 protein-binding family B member 1; alzheimer'S disease, APP, AICD, Fe65, PTB domain, alternative splicing, polymorphism, alzheimer disease, apoptosis; 2.00A {Homo sapiens} SCOP: b.55.1.0 PDB: 3dxd_A 3dxc_A
Probab=23.23 E-value=73 Score=25.62 Aligned_cols=26 Identities=15% Similarity=0.206 Sum_probs=22.6
Q ss_pred ceEEEEEecCceEEEcCCCceeeeee
Q psy14290 303 EMLLIAINKHGVSLIHPQTKISLDYK 328 (332)
Q Consensus 303 ~~~~LgVn~~Gv~i~~~~~~~~l~~~ 328 (332)
.++.|.|+..||.+.+.++++++...
T Consensus 46 ~~v~l~Vs~~gi~v~~~~t~e~l~~~ 71 (140)
T 3dxe_A 46 TPSHVSVAPATLTILHQQTEAVLGEC 71 (140)
T ss_dssp EEEEEEECSSEEEEEETTTCCEEEEE
T ss_pred ceEEEEEcCCEEEEEecCCcceeeec
Confidence 46999999999999999999887644
No 88
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=23.05 E-value=64 Score=20.75 Aligned_cols=33 Identities=27% Similarity=0.234 Sum_probs=21.9
Q ss_pred eEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 131 FVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 131 f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
-+.|++|+.. ..+.-|++.+||.+.+ ++...+|
T Consensus 3 ~a~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 36 (58)
T 4e6r_A 3 PAFVXFAYVA--EREDELSLVXGSRVTVMEXCSDGW 36 (58)
T ss_dssp EEEECSCBCC--CSTTBCCBCTTCEEEEEEECTTSE
T ss_pred EEEECccCCC--CCCCEeeEeCCCEEEEeEcCCCCE
Confidence 3578888875 3455688999999965 3333344
No 89
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=23.04 E-value=58 Score=23.35 Aligned_cols=35 Identities=31% Similarity=0.469 Sum_probs=24.4
Q ss_pred ceeEEEEeec-CCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 129 SSFVIALQDY-KAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~-~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
..++.|++|+ .. .++.-|++.+||+|.+ ++.+.+|
T Consensus 18 ~~~~~Alydy~~a--~~~~eLsf~~GDiI~V~~~~~~gW 54 (83)
T 2ke9_A 18 SLKVRALKDFWNL--HDPTALNVRAGDVITVLEQHPDGR 54 (83)
T ss_dssp CEEEEESSCBCCC--SCTTBCCBCTTCEEEESCSSCSSC
T ss_pred CeEEEEccccCCC--CCCCcccccCCCEEEEEEecCCCe
Confidence 3468899998 43 4556789999999975 4333444
No 90
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.03 E-value=71 Score=21.53 Aligned_cols=29 Identities=24% Similarity=0.421 Sum_probs=21.8
Q ss_pred cceeEEEEeecCCCCCCCeeeeccCCceEEe
Q psy14290 128 RSSFVIALQDYKAPGEGSSFLSFHRGDLILL 158 (332)
Q Consensus 128 ~s~f~lal~d~~~~~d~~~~L~~~kgd~iiL 158 (332)
+..++.|++|+.. ..+.-|++.+||++.+
T Consensus 6 ~~~~~~al~dy~~--~~~~eLs~~~Gd~i~v 34 (68)
T 1x2k_A 6 SGKVFRALYTFEP--RTPDELYFEEGDIIYI 34 (68)
T ss_dssp CSEEEEESSCCCC--CSTTBCCCCSSCEEEE
T ss_pred CcEEEEECceECC--CCCCcccCCCCCEEEE
Confidence 3456889999876 3455788999999975
No 91
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=22.87 E-value=41 Score=22.84 Aligned_cols=27 Identities=22% Similarity=0.335 Sum_probs=20.2
Q ss_pred eEEEEeecCCCCCCCeeeeccCCceEEee
Q psy14290 131 FVIALQDYKAPGEGSSFLSFHRGDLILLE 159 (332)
Q Consensus 131 f~lal~d~~~~~d~~~~L~~~kgd~iiLe 159 (332)
++.|+.|+.. ..+.-|++.+||++.+.
T Consensus 3 ~~~Alydy~~--~~~~eLs~~~Gd~i~v~ 29 (65)
T 2fei_A 3 QCKVLFEYIP--QNEDELELKVGDIIDIN 29 (65)
T ss_dssp EEECSSCCCC--CSTTBCCCCTTCEEECC
T ss_pred EEEECccCCc--CCcCccCCCCCCEEEEE
Confidence 5678888875 44556889999999753
No 92
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=22.77 E-value=61 Score=21.93 Aligned_cols=35 Identities=26% Similarity=0.318 Sum_probs=24.0
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
..++.|++|+.. ..+..|++.+||++.+ ++.+.+|
T Consensus 13 ~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 48 (72)
T 4glm_A 13 LTYGVALYRFQA--LEPNELDFEVGDKIRILATLEDGW 48 (72)
T ss_dssp CCEEEESSCBCC--CSTTBCCBCTTCEEEEEEECSTTE
T ss_pred CeEEEECccCCC--CCCCcCCCCCCCEEEEEEccCCCE
Confidence 456889998875 4455688999999975 3333344
No 93
>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}
Probab=22.29 E-value=55 Score=22.41 Aligned_cols=36 Identities=28% Similarity=0.435 Sum_probs=24.7
Q ss_pred cceeEEEEeecCCCCCCCeeeeccCCceEEeecCCCce
Q psy14290 128 RSSFVIALQDYKAPGEGSSFLSFHRGDLILLEEGSTGE 165 (332)
Q Consensus 128 ~s~f~lal~d~~~~~d~~~~L~~~kgd~iiLeq~~~~~ 165 (332)
...++.|++|+.. ..+.-|++.+||++.+.....+|
T Consensus 10 ~~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~W 45 (74)
T 2m0y_A 10 EEKYGVAFYNYDA--RGADELSLQIGDTVHILETYEGW 45 (74)
T ss_dssp CCSCEEECSEECC--CSSSBCCEETTEEEEEEEBSSSC
T ss_pred CCeEEEEceeeCC--CCcCcccCCCCCEEEEEEcCCCe
Confidence 3567899999876 44556889999999753323343
No 94
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=22.22 E-value=69 Score=20.90 Aligned_cols=28 Identities=32% Similarity=0.502 Sum_probs=21.2
Q ss_pred eeEEEEeecCCCCCCCeeeeccCCceEEee
Q psy14290 130 SFVIALQDYKAPGEGSSFLSFHRGDLILLE 159 (332)
Q Consensus 130 ~f~lal~d~~~~~d~~~~L~~~kgd~iiLe 159 (332)
..+.|+.|+.. ..+.-|++.+||++.+.
T Consensus 4 ~~~~al~dy~~--~~~~eLs~~~Gd~i~v~ 31 (60)
T 1oot_A 4 PKAVALYSFAG--EESGDLPFRKGDVITIL 31 (60)
T ss_dssp CEEEESSCBCC--CSTTBCCBCTTCEEEEE
T ss_pred cEEEECccCCc--CCcCEeeEcCCCEEEEE
Confidence 35788888875 44567889999999763
No 95
>4fxe_A Antitoxin RELB; toxin/antitoxin system, toxin, nuclease, translational contr response, RELB, ribosome, toxin-toxin inhibitor compl; 2.75A {Escherichia coli} PDB: 2k29_A 2kc8_B
Probab=22.08 E-value=1.4e+02 Score=21.52 Aligned_cols=33 Identities=33% Similarity=0.391 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHH---hcCCC
Q psy14290 252 EWKRCIIAAYNQDAGMSPEDAKITFLKII---YRWPT 285 (332)
Q Consensus 252 ~w~~~I~~~~~~~~g~s~~~A~~~yL~~~---~~~p~ 285 (332)
+..+...+...++ |+|+++|-..|++.+ +.+|+
T Consensus 11 ~lK~~a~~v~~~l-Gl~~s~Ai~~fl~~v~~~~~iPF 46 (79)
T 4fxe_A 11 ELKARSYAALEKM-GVTPSEALRLMLEYIADNERLPF 46 (79)
T ss_dssp HHHHHHHHHHHHH-TCCHHHHHHHHHHHHHHHSSCSS
T ss_pred HHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHhCCCCC
Confidence 3444545555555 999999999999887 67775
No 96
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=21.82 E-value=65 Score=23.11 Aligned_cols=36 Identities=22% Similarity=0.452 Sum_probs=24.8
Q ss_pred cceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 128 RSSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 128 ~s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
...++.|+.|+.. ..+.-|++.+||++.+ +..+.+|
T Consensus 16 ~~~~~~Alydy~a--~~~~eLsf~~Gd~i~Vl~~~~~gW 52 (83)
T 1neg_A 16 GKELVLALYDYQE--KSPREVTMKKGDILTLLNSTNKDW 52 (83)
T ss_dssp -CCEEEESSCBCC--SSTTBCCBCTTCEEEEEECCSSSE
T ss_pred CceEEEEccccCC--CCCCccccCCCCEEEEEEecCCCE
Confidence 3446899999876 4556788999999975 4334454
No 97
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=21.81 E-value=72 Score=21.41 Aligned_cols=33 Identities=24% Similarity=0.399 Sum_probs=23.1
Q ss_pred eEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 131 FVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 131 f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
.+.|+.++.. ..+.-|++.+||.+.+ ++.+.+|
T Consensus 4 ~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 37 (67)
T 1gl5_A 4 IVVAMYDFQA--TEAHDLRLERGQEYIILEKNDLHW 37 (67)
T ss_dssp CEEECSCBCC--SSSSBCCBCTTCEEEEEECSSSSE
T ss_pred EEEECccCCC--CCCCeecCCcCCEEEEEEccCCCc
Confidence 5788888875 4556788999999975 4333444
No 98
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.73 E-value=67 Score=23.03 Aligned_cols=35 Identities=26% Similarity=0.467 Sum_probs=24.1
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
..++.|++|+.. ....-|++.+||+|.+ ++.+.+|
T Consensus 17 ~~~~~Alydy~~--~~~~eLsf~~Gd~i~v~~~~~~~W 52 (88)
T 1x2q_A 17 ARKVRALYDFEA--VEDNELTFKHGEIIIVLDDSDANW 52 (88)
T ss_dssp CEEEEESSCCCC--CSSSCCCCCSSCEEEEEECSCSSS
T ss_pred CeEEEEcccCCC--CCcCccCCCCCCEEEEEEeCCCCE
Confidence 456889999876 3445688999999975 3333444
No 99
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=21.71 E-value=56 Score=21.25 Aligned_cols=34 Identities=24% Similarity=0.359 Sum_probs=23.6
Q ss_pred eeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 130 SFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 130 ~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
.++.|+.++.. ..+.-|++.+||++.+ +....+|
T Consensus 4 ~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 38 (58)
T 1zlm_A 4 KVFRALYTFEP--RTPDELYFEEGDIIYITDMSDTNW 38 (58)
T ss_dssp EEEEESSCBCC--SSTTBCCBCTTCEEEEEECCSSSE
T ss_pred EEEEECccCCC--CCCCCccCCCCCEEEEEEeCCCCE
Confidence 46788888876 4456788999999975 3333344
No 100
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=21.68 E-value=74 Score=21.52 Aligned_cols=29 Identities=21% Similarity=0.447 Sum_probs=22.3
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEee
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILLE 159 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiLe 159 (332)
..++.|++|+.. ..+.-|++.+||++.+.
T Consensus 7 ~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~ 35 (70)
T 2da9_A 7 GDYCKVIFPYEA--QNDDELTIKEGDIVTLI 35 (70)
T ss_dssp SEEEEECSCCCC--SSTTBCCCCTTEEEEEE
T ss_pred CcEEEECcCCCC--CCcCEeeEcCCCEEEEE
Confidence 457889999876 45567889999999753
No 101
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.53 E-value=67 Score=21.73 Aligned_cols=29 Identities=31% Similarity=0.406 Sum_probs=22.2
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEee
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILLE 159 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiLe 159 (332)
..++.|++|+.. ..+.-|++.+||++.+.
T Consensus 7 ~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~ 35 (71)
T 2cre_A 7 GLLARALYDNCP--DCSDELAFSRGDILTIL 35 (71)
T ss_dssp CEEEEESSCCCC--SSSSBCCCCSSCCEEEE
T ss_pred cEEEEECcccCc--CCCCCCCCCCCCEEEEe
Confidence 346889999875 45567889999999763
No 102
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=21.47 E-value=77 Score=21.24 Aligned_cols=29 Identities=24% Similarity=0.340 Sum_probs=21.8
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEee
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILLE 159 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiLe 159 (332)
...+.|+.|+.. ..+.-|++.+||++.+.
T Consensus 7 ~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~ 35 (68)
T 2dl3_A 7 GRPARAKFDFKA--QTLKELPLQKGDIVYIY 35 (68)
T ss_dssp SEEEEESSCBCC--SSTTBCCBCTTCEEEEE
T ss_pred CcEEEECccCCC--CCcCCccCCCCCEEEEe
Confidence 456889999876 34456889999999753
No 103
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=21.07 E-value=72 Score=21.72 Aligned_cols=35 Identities=29% Similarity=0.445 Sum_probs=24.3
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
..++.|++|+.. ..+.-|++.+||++.+ ++.+.+|
T Consensus 15 ~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 50 (73)
T 3h0h_A 15 VTLFVALYDYEA--ITEDDLSFHKGEKFQILNSSEGDW 50 (73)
T ss_dssp TCEEEESSCBCC--SSTTBCCBCTTCEEEEEECSSSSE
T ss_pred CEEEEECccCCC--CCCCcceEeCCCEEEEEEecCCCe
Confidence 457889999875 4455688999999965 4333444
No 104
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.06 E-value=71 Score=22.43 Aligned_cols=36 Identities=19% Similarity=0.174 Sum_probs=24.4
Q ss_pred cceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 128 RSSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 128 ~s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
...++.|++|+.. ..+.-|++.+||++.+ ++.+..|
T Consensus 9 ~~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 45 (81)
T 2ysq_A 9 SIVSAEAVWDHVT--MANRELAFKAGDVIKVLDASNKDW 45 (81)
T ss_dssp CCEEEEESSCCCC--SSSSSCCCCTTCEEEEEECCSSSE
T ss_pred CceEEEEeeeECC--CCCCcCCCCCCCEEEEEEEcCcCE
Confidence 3456889999875 4455688999999975 3333344
No 105
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=21.05 E-value=72 Score=21.48 Aligned_cols=34 Identities=38% Similarity=0.511 Sum_probs=23.5
Q ss_pred eeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 130 SFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 130 ~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
..+.|+.|+.. ..+.-|++.+||.+.+ ++.+.+|
T Consensus 7 ~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 41 (69)
T 4esr_A 7 PTVVALYDYTA--NRSDELTIHRGDIIRVFFKDNEDW 41 (69)
T ss_dssp CEEEESSCBCC--CSTTBCCBCTTCEEEEEEECSSSE
T ss_pred CEEEECccCCC--CCcCcCCCCCCCEEEEEEecCCCe
Confidence 46788888875 4556688999999965 4333444
No 106
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.83 E-value=72 Score=22.21 Aligned_cols=34 Identities=24% Similarity=0.484 Sum_probs=23.6
Q ss_pred eeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 130 SFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 130 ~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
.++.|++++.. ..+.-|++.+||++.+ ++...+|
T Consensus 8 ~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 42 (79)
T 2yun_A 8 RLCKALYSFQA--RQDDELNLEKGDIVIIHEKKEEGW 42 (79)
T ss_dssp EEEEESSCBCC--SSTTBCCBCTTCEEEEEECCSSSC
T ss_pred CEEEECccCCc--CCCCCcCCCCCCEEEEEEcCCCCE
Confidence 46789998876 4455688999999975 3333344
No 107
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=20.82 E-value=56 Score=21.45 Aligned_cols=28 Identities=39% Similarity=0.596 Sum_probs=21.6
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEe
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILL 158 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiL 158 (332)
..++.|+.|+.. ..+.-|++.+||++.+
T Consensus 6 ~~~~~al~dy~~--~~~~eLs~~~Gd~i~v 33 (60)
T 2gnc_A 6 PEFAIAKFDYVG--RSARELSFKKGASLLL 33 (60)
T ss_dssp CEEEEESSCBCC--SSTTBCCBCTTCEEEE
T ss_pred CEEEEECCCCCc--CCcCCcCCCCCCEEEE
Confidence 456889999876 4455688999999975
No 108
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=20.67 E-value=65 Score=22.70 Aligned_cols=35 Identities=31% Similarity=0.450 Sum_probs=24.2
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
..++.|++|+.. ..+.-|++.+||++.+ ++...+|
T Consensus 5 ~~~~~Alydy~~--~~~~eLs~~~Gd~i~vl~~~~~~W 40 (79)
T 3cqt_A 5 STLFEALYDYEA--RTEDDLSFHKGEKFQILNSSEGDW 40 (79)
T ss_dssp CCCEEESSCBCC--CSTTBCCBCTTCEEEEEECTTSSE
T ss_pred CcEEEECccCCC--CCcCcCCCCCCCEEEEEEecCCCe
Confidence 346789998876 4455688999999976 3333444
No 109
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=20.61 E-value=67 Score=20.79 Aligned_cols=26 Identities=27% Similarity=0.576 Sum_probs=20.1
Q ss_pred eEEEEeecCCCCCCCeeeeccCCceEEe
Q psy14290 131 FVIALQDYKAPGEGSSFLSFHRGDLILL 158 (332)
Q Consensus 131 f~lal~d~~~~~d~~~~L~~~kgd~iiL 158 (332)
.+.|++|+.. ..+.-|++.+||.+.+
T Consensus 3 ~~~al~d~~~--~~~~eLs~~~Gd~i~v 28 (59)
T 1yn8_A 3 RAVALYDFEP--ENDNELRLAEGDIVFI 28 (59)
T ss_dssp EEEECSCBCC--CSTTBCCBCTTCEEEE
T ss_pred EEEECccCCC--CCCCCcCCCCCCEEEE
Confidence 5788888875 4455788999999975
No 110
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=20.61 E-value=77 Score=22.01 Aligned_cols=35 Identities=20% Similarity=0.313 Sum_probs=24.2
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
...+.|+.|+.. ..+.-|++.+||+|.+ ++.+.+|
T Consensus 7 ~~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 42 (78)
T 2yuo_A 7 GRRAKALLDFER--HDDDELGFRKNDIITIISQKDEHC 42 (78)
T ss_dssp CEEEEESSCBCC--SSTTBCCBCTTCEEEEEECCSSSE
T ss_pred ceEEEECccCCC--CCCCCccCCCCCEEEEEEecCCCE
Confidence 346889999876 3445688899999975 4334444
No 111
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=20.44 E-value=84 Score=21.34 Aligned_cols=34 Identities=24% Similarity=0.487 Sum_probs=23.4
Q ss_pred eeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 130 SFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 130 ~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
.++.|++|+.. ..+.-|++.+||++.+ +..+..|
T Consensus 6 ~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 40 (73)
T 3thk_A 6 ELVLALYDYQE--KSPREVTMKKGDILTLLNSTNKDW 40 (73)
T ss_dssp CEEEECSCBCC--CSTTBCCBCTTCEEEEEECCSSSE
T ss_pred EEEEECcCCCc--CCCCccCCCCCCEEEEEECCCCCe
Confidence 46788998875 4455688999999975 3333444
No 112
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.38 E-value=52 Score=23.18 Aligned_cols=35 Identities=31% Similarity=0.469 Sum_probs=23.8
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEeecCCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILLEEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiLeq~~~~~ 165 (332)
..+++|++|+... ...-|++.+||++.+.+.+..|
T Consensus 17 ~~~~~Alydy~a~--~~~eLs~~~Gd~i~v~~~~~~W 51 (79)
T 2cud_A 17 SDFLAVLSDYPSP--DISPPIFRRGEKLRVISDEGGW 51 (79)
T ss_dssp CCEEEESSCSSCT--TTSCCSSCTTCEEEEEEEETTE
T ss_pred CeEEEEccCCCCC--CCCcCCCCCCCEEEEEecCCCe
Confidence 4478999998763 3445888999999763333343
No 113
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=20.38 E-value=87 Score=20.26 Aligned_cols=28 Identities=25% Similarity=0.303 Sum_probs=21.0
Q ss_pred eeEEEEeecCCCCCCCeeeeccCCceEEee
Q psy14290 130 SFVIALQDYKAPGEGSSFLSFHRGDLILLE 159 (332)
Q Consensus 130 ~f~lal~d~~~~~d~~~~L~~~kgd~iiLe 159 (332)
.++.|+.|+.. ..+.-|++.+||.+.+.
T Consensus 3 ~~~~al~dy~~--~~~~eLs~~~Gd~i~v~ 30 (60)
T 2v1q_A 3 ERGIVQYDFMA--ESQDELTIKSGDKVYIL 30 (60)
T ss_dssp CEEEECSCBCC--CSTTBCCBCTTCEEEEE
T ss_pred cEEEEeeeECC--CCCCCccCCCCCEEEEE
Confidence 36788888875 44557889999999753
No 114
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.25 E-value=60 Score=21.97 Aligned_cols=35 Identities=20% Similarity=0.277 Sum_probs=24.2
Q ss_pred ceeEEEEeecCCCCCCCeeeeccCCceEEeecCCCce
Q psy14290 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILLEEGSTGE 165 (332)
Q Consensus 129 s~f~lal~d~~~~~d~~~~L~~~kgd~iiLeq~~~~~ 165 (332)
..++.|+.|+.. ..+.-|++.+||++.+.+...+|
T Consensus 7 ~~~~~alydy~~--~~~~eLs~~~Gd~i~v~~~~~~W 41 (68)
T 1wxb_A 7 GKYVKILYDFTA--RNANELSVLKDEVLEVLEDGRQW 41 (68)
T ss_dssp CCCEECSSCBCC--SSSSBCCBCTTCEEEEEECSSSE
T ss_pred CEEEEECccCCC--CCCCccCCCCCCEEEEEEcCCCE
Confidence 346788888876 45557888999999763333444
No 115
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=20.16 E-value=90 Score=20.30 Aligned_cols=34 Identities=24% Similarity=0.472 Sum_probs=23.4
Q ss_pred eeEEEEeecCCCCCCCeeeeccCCceEEe-ecCCCce
Q psy14290 130 SFVIALQDYKAPGEGSSFLSFHRGDLILL-EEGSTGE 165 (332)
Q Consensus 130 ~f~lal~d~~~~~d~~~~L~~~kgd~iiL-eq~~~~~ 165 (332)
.++.|+.|+.. ..+.-|++.+||++.+ ++...+|
T Consensus 7 ~~~~al~dy~~--~~~~eLs~~~Gd~i~v~~~~~~~W 41 (62)
T 3ngp_A 7 ELVLVLYDYQE--KSPRELTVKKGDILTLLNSTNKDW 41 (62)
T ss_dssp CEEEECSCBCC--CSTTBCCBCTTCEEEEEECCSSSE
T ss_pred EEEEECcCCCC--CCCCCccCCCCCEEEEeEecCCCe
Confidence 46788988875 4455688999999975 3333444
Done!