RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14290
(332 letters)
>d1mixa1 a.11.2.1 (A:195-308) Talin {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 114
Score = 75.7 bits (186), Expect = 8e-18
Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Query: 170 MKKLWTNTVPGKDRNADLIFHFHQELPKLLRGYHKCSKEEAAKLAALVYRVRFGESKQEL 229
MK +++ L + Q +L G H S ++A + A +++FG ++
Sbjct: 1 MKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGYQCQIQFGPHNEQK 60
Query: 230 QAI-PQMLRELIPSDSIKIQSSTEWKRCIIAAYNQDAGMSPEDAKITFLKIIYRWPTF 286
L++ +P + IK + +R I A+ MS +AK+ ++K+ T+
Sbjct: 61 HKPGFLELKDFLPKEYIK----QKGERKIFMAHKNCGNMSEIEAKVRYVKLARSLKTY 114
>d1gg3a1 a.11.2.1 (A:82-187) Erythroid membrane protein 4.1R {Human
(Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 63.8 bits (155), Expect = 2e-13
Identities = 15/96 (15%), Positives = 33/96 (34%), Gaps = 5/96 (5%)
Query: 191 FHQELPKLLRGYHKCSKEEAAKLAALVYRVRFGESKQELQAIPQMLRELIPSDSIKIQSS 250
Q ++ G CS A L + + G+ EL + + + +
Sbjct: 16 CLQLRQDIVAGRLPCSFATLALLGSYTIQSELGDYDPELHG-----VDYVSDFKLAPNQT 70
Query: 251 TEWKRCIIAAYNQDAGMSPEDAKITFLKIIYRWPTF 286
E + ++ + M+P A + FL+ + +
Sbjct: 71 KELEEKVMELHKSYRSMTPAQADLEFLENAKKLSMY 106
>d2al6a1 a.11.2.1 (A:131-253) Focal adhesion kinase 1 {Chicken
(Gallus gallus) [TaxId: 9031]}
Length = 123
Score = 64.0 bits (155), Expect = 2e-13
Identities = 22/116 (18%), Positives = 41/116 (35%), Gaps = 11/116 (9%)
Query: 181 KDRNADLIFHFHQELPKLLRGYHKCSKEEAA-KLAALVYRVRFGESKQELQA-------- 231
+D+ L F + Q + +E A KL L R +GE +
Sbjct: 9 EDKPT-LNFFYQQVKNDYMLEIADQVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVL 67
Query: 232 -IPQMLRELIPSDSIKIQSSTEWKRCIIAAYNQDAGMSPEDAKITFLKIIYRWPTF 286
LR P + + ++ I + Q A ++ E++ + F +I+ F
Sbjct: 68 EKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESILKFFEILSPVYRF 123
>d1ef1a1 a.11.2.1 (A:88-198) Moesin {Human (Homo sapiens) [TaxId:
9606]}
Length = 111
Score = 63.0 bits (153), Expect = 3e-13
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 189 FHFHQELPKLLRGYHKCSKEEAAKLAALVYRVRFGESKQELQ-AIPQMLRELIPSDSIKI 247
F Q +L C E A LA+ + ++G+ +E+ + +L+P ++
Sbjct: 14 LFFLQVKEGILNDDIYCPPETAVLLASYAVQSKYGDFNKEVHKSGYLAGDKLLPQRVLEQ 73
Query: 248 Q--SSTEWKRCIIAAYNQDAGMSPEDAKITFLKI 279
+ +W+ I + + GM EDA + +LKI
Sbjct: 74 HKLNKDQWEERIQVWHEEHRGMLREDAVLEYLKI 107
>d1h4ra1 a.11.2.1 (A:104-214) Merlin {Human (Homo sapiens) [TaxId:
9606]}
Length = 111
Score = 62.9 bits (153), Expect = 4e-13
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 198 LLRGYHKCSKEEAAKLAALVYRVRFGESKQELQA-IPQMLRELIPSDSIKI--QSSTEWK 254
+L C E + LA+ + ++G+ + EL+P I + + W+
Sbjct: 23 ILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWE 82
Query: 255 RCIIAAYNQDAGMSPEDAKITFLKI 279
I A Y + G + ++A++ +LKI
Sbjct: 83 ERITAWYAEHRGRARDEAEMEYLKI 107
>d1mixa2 b.55.1.5 (A:309-400) Talin {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 92
Score = 46.3 bits (110), Expect = 1e-07
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 287 GSAFFEVKQTTEPNYPEM-LLIAINKHGVSLIHPQTK 322
G +FF VK+ + + L+ I K V + +TK
Sbjct: 1 GVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTK 37
Score = 25.1 bits (55), Expect = 5.1
Identities = 4/22 (18%), Positives = 12/22 (54%)
Query: 104 FTFQSPNAEDIRDLVVYFLEGL 125
++ Q+ E I L+ +++ +
Sbjct: 70 YSVQTTEGEQIAQLIAGYIDII 91
>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 33.9 bits (78), Expect = 0.002
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILLEE 160
S++V AL D+ +G L F RGD I + +
Sbjct: 1 STYVQALFDFDPQEDGE--LGFRRGDFIHVMD 30
>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken
(Gallus gallus) [TaxId: 9031]}
Length = 55
Score = 31.2 bits (71), Expect = 0.015
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 131 FVIALQDYKAPGEGSSFLSFHRGDLILLEE 160
V+AL DY+ ++ +GD++ L
Sbjct: 2 LVLALYDYQEKSPRE--VTMKKGDILTLLN 29
>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 32.4 bits (73), Expect = 0.020
Identities = 17/60 (28%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 130 SFVIALQDYKAPGEGSSFLSFHRGDLILLEEGSTGETVFFMKKLWTNTVPGKDRNADLIF 189
S +ALQDY AP FL+ HRG ++ + G F G F
Sbjct: 22 SMAVALQDYMAPDCR--FLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYF 79
>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 57
Score = 30.8 bits (70), Expect = 0.025
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 130 SFVIALQDYKAPGEGSSFLSFHRGDLILLEEGSTGE 165
+ +AL DY+A E LSFH+G+ + S G+
Sbjct: 1 ALFVALYDYEAITEDD--LSFHKGEKFQILNSSEGD 34
>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 31.0 bits (70), Expect = 0.025
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 130 SFVIALQDYKAPGEGSSFLSFHRGDLILLEE 160
+ VIAL Y+ +G L F +G+ + + E
Sbjct: 7 NLVIALHSYEPSHDGD--LGFEKGEQLRILE 35
>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 69
Score = 31.0 bits (70), Expect = 0.027
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Query: 132 VIALQDYKA----PGEGSSFLSFHRGDLILLEEGSTGETVFFMKKLWTNTV 178
+ Q+Y PG FL + GD++ L + + + TN V
Sbjct: 7 MEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEV 57
>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 67
Score = 30.9 bits (70), Expect = 0.031
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILLEE 160
S V+A+ D++A L RG ++ E
Sbjct: 2 SEIVVAMYDFQATEAHD--LRLERGQEYIILE 31
>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Caenorhabditis
elegans, SEM-5 [TaxId: 6239]}
Length = 58
Score = 30.4 bits (69), Expect = 0.034
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILLEE 160
+ FV AL D+ G L+F RGD+I L
Sbjct: 2 TKFVQALFDFNPQESGE--LAFKRGDVITLIN 31
>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 67
Score = 30.5 bits (69), Expect = 0.036
Identities = 9/29 (31%), Positives = 12/29 (41%), Gaps = 2/29 (6%)
Query: 132 VIALQDYKAPGEGSSFLSFHRGDLILLEE 160
V+AL DY L +GD + E
Sbjct: 11 VVALYDYMPMNAND--LQLRKGDEYFILE 37
>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo
sapiens) [TaxId: 9606]}
Length = 65
Score = 30.6 bits (69), Expect = 0.036
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 132 VIALQDYKAPGEGSSFLSFHRGDLILLEE 160
V+AL DY+A LSF +GD +++ E
Sbjct: 7 VVALYDYEAIHHED--LSFQKGDQMVVLE 33
>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 30.5 bits (69), Expect = 0.039
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 127 KRSSFVIALQDYKAPGEGSSFLSFHRGDLILLEE 160
K+ S V AL Y+A L F GD+IL+
Sbjct: 3 KKGSQVEALFSYEATQPED--LEFQEGDIILVLS 34
>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 57
Score = 30.1 bits (68), Expect = 0.041
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILL 158
+ +V AL D+ E L F +GD++ +
Sbjct: 1 AEYVRALFDFNGNDEED--LPFKKGDILRI 28
>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 30.1 bits (68), Expect = 0.044
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Query: 131 FVIALQDYKAPGEGSSFLSFHRGDLILLEE 160
+ A DY A + L+F D I+ E
Sbjct: 2 WATAEYDYDAAEDNE--LTFVENDKIINIE 29
>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 57
Score = 29.7 bits (67), Expect = 0.064
Identities = 8/30 (26%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 131 FVIALQDYKAPGEGSSFLSFHRGDLILLEE 160
+ AL D++A E L F G+++ + +
Sbjct: 3 WARALYDFEALEEDE--LGFRSGEVVEVLD 30
>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 69
Score = 29.7 bits (67), Expect = 0.080
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 132 VIALQDYKAPGEGSSFLSFHRGDLILLEE 160
IAL Y + G L+F G+ IL+ +
Sbjct: 11 YIALYPYSSVEPGD--LTFTEGEEILVTQ 37
>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 29.8 bits (67), Expect = 0.080
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 131 FVIALQDYKAPGEGSSFLSFHRGDLILLEE 160
V AL DYKA E L+F + +I E
Sbjct: 8 AVKALFDYKAQREDE--LTFIKSAIIQNVE 35
>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 28.6 bits (64), Expect = 0.16
Identities = 10/45 (22%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 129 SSFVIALQDYKAPGEGSSFLSFHRGDLILLEEGSTGETVFFMKKL 173
S +AL + G L F +GD+I + + S + ++ ++
Sbjct: 1 SPKAVALYSFAGEESGD--LPFRKGDVITILKKSDSQNDWWTGRV 43
>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 74
Score = 28.6 bits (64), Expect = 0.20
Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 132 VIALQDYKAPGEGSSFLSFHRGDLILLEEGSTG 164
AL + A + L+F + D+I + E
Sbjct: 13 AQALCSWTAKKDNH--LNFSKHDIITVLEQQEN 43
>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 64
Score = 28.2 bits (63), Expect = 0.22
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 132 VIALQDYKAPGEGSSFLSFHRGDLILLEE 160
+AL DY++ E LSF +G+ + +
Sbjct: 5 FVALYDYESRTETD--LSFKKGERLQIVN 31
>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA
1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 72
Score = 27.9 bits (62), Expect = 0.32
Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 132 VIALQDYKAPGEGSSFLSFHRGDLI 156
V + + A G + LSF +GD++
Sbjct: 10 VKTIFPHTA-GNNKTLLSFAQGDVL 33
>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 59
Score = 27.2 bits (60), Expect = 0.44
Identities = 7/50 (14%), Positives = 16/50 (32%), Gaps = 2/50 (4%)
Query: 131 FVIALQDYKAPGEGSSFLSFHRGDLILLEEGSTGETVFFMKKLWTNTVPG 180
+ + D+ A LS + D++ + + + VP
Sbjct: 3 YAKSKYDFVARNSSE--LSVMKDDVLEILDDRRQWWKVRNASGDSGFVPN 50
>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 83
Score = 28.0 bits (62), Expect = 0.44
Identities = 10/36 (27%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
Query: 132 VIALQDYKAPGEGSSFLSFHRGDLILLEEGSTGETV 167
V A DY A L GD++L+ E
Sbjct: 15 VQAQHDYTATDTDE--LQLKAGDVVLVIPFQNPEEQ 48
>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 60
Score = 27.0 bits (60), Expect = 0.49
Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 132 VIALQDYKAPGEGSSFLSFHRGDLILLEE 160
A+ DY A +SF GD I+ +
Sbjct: 6 FRAMYDYMAADADE--VSFKDGDAIINVQ 32
>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus
[TaxId: 10090]}
Length = 53
Score = 26.4 bits (58), Expect = 0.72
Identities = 7/25 (28%), Positives = 10/25 (40%), Gaps = 2/25 (8%)
Query: 132 VIALQDYKAPGEGSSFLSFHRGDLI 156
VIAL DY+ L+ +
Sbjct: 1 VIALYDYQTNDPQE--LALRCDEEY 23
>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 80
Score = 27.2 bits (60), Expect = 0.86
Identities = 9/30 (30%), Positives = 11/30 (36%), Gaps = 2/30 (6%)
Query: 131 FVIALQDYKAPGEGSSFLSFHRGDLILLEE 160
Y A G LS G LIL+ +
Sbjct: 9 IAQVTSAYVASGSEQ--LSLAPGQLILILK 36
>d1dwka1 a.35.1.4 (A:1-86) Cyanase N-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 86
Score = 26.2 bits (58), Expect = 1.7
Identities = 9/39 (23%), Positives = 12/39 (30%), Gaps = 8/39 (20%)
Query: 198 LLRGYHKCSKEEAAKLAALVYRVRFG---ESKQELQAIP 233
L G + A + A +S LQ IP
Sbjct: 46 ALLGQQALPADAARLVGAK-----LDLDEDSILLLQMIP 79
>d3c2ca_ a.3.1.1 (A:) Cytochrome c2 {Rhodospirillum rubrum [TaxId:
1085]}
Length = 112
Score = 26.3 bits (57), Expect = 2.4
Identities = 8/31 (25%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 96 HRPIPGEEFTFQSPNAEDIRDLVVYFLEGLK 126
P + TF+ ++I +++ Y L+ LK
Sbjct: 83 GDPKAKSKMTFKLTKDDEIENVIAY-LKTLK 112
>d1ihpa_ c.60.1.2 (A:) Phytase
(myo-inositol-hexakisphosphate-3-phosphohydrolase)
{Aspergillus ficuum [TaxId: 5058]}
Length = 438
Score = 26.4 bits (57), Expect = 6.4
Identities = 15/103 (14%), Positives = 28/103 (27%), Gaps = 9/103 (8%)
Query: 192 HQELPKLLRGYHKCSKEEAAKLAALVYRVRFGE----SKQELQAIPQMLR----ELIPSD 243
+ L + ++ + A L Y + + +QEL L +
Sbjct: 66 YSALIEEIQQNATTFDGKYAFLKTYNYSLGADDLTPFGEQELVNSGIKFYQRYESLTRNI 125
Query: 244 SIKIQSSTEWKRCIIAAYNQDAGMSPEDAKITFLKIIYRWPTF 286
I+S + R I + G K + P
Sbjct: 126 VPFIRS-SGSSRVIASGKKFIEGFQSTKLKDPRAQPGQSSPKI 167
>d1y6ia1 a.118.1.22 (A:1-82) Mg-chelatase cofactor Gun4
{Synechocystis sp. pcc 6803 [TaxId: 1148]}
Length = 82
Score = 24.4 bits (53), Expect = 8.9
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 213 LAALVYRVRFGESKQELQAIPQMLR 237
L L ++ K++L AI +
Sbjct: 5 LTELSQQLHDASEKKQLTAIAALAE 29
>d1z3xa1 a.118.1.22 (A:1-87) GUN4-like protein Ycf53, N-terminal
domain {Thermosynechococcus elongatus [TaxId: 146786]}
Length = 87
Score = 24.4 bits (53), Expect = 9.0
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 213 LAALVYRVRFGESKQELQAIPQMLR 237
LA L ++ G K +L A+ +
Sbjct: 8 LADLQEQLYNGNEKSQLAAMSTLST 32
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.135 0.408
Gapped
Lambda K H
0.267 0.0503 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,252,855
Number of extensions: 58064
Number of successful extensions: 197
Number of sequences better than 10.0: 1
Number of HSP's gapped: 181
Number of HSP's successfully gapped: 42
Length of query: 332
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 246
Effective length of database: 1,226,816
Effective search space: 301796736
Effective search space used: 301796736
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.7 bits)