BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14294
(314 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|443703547|gb|ELU01026.1| hypothetical protein CAPTEDRAFT_17841 [Capitella teleta]
Length = 464
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 98/161 (60%), Positives = 121/161 (75%), Gaps = 7/161 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L DVS+W+HQL KG D G VPNAHLIGLYHRICKLL+++IKPVFVFDGGVP LKKQ
Sbjct: 27 LAVDVSMWMHQLMKGMRDSHGNPVPNAHLIGLYHRICKLLYYRIKPVFVFDGGVPALKKQ 86
Query: 209 TI-------STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAE 261
T LE + +L R +Q R+A+++TEQM+ EAQEL++LFG+P++V+P EAE
Sbjct: 87 TTDELIDLQKVLEVENTELHNTRNQQDRMATSLTEQMNIEAQELVRLFGLPYVVSPMEAE 146
Query: 262 AQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHV 302
AQCA L+L + T G +TDDSDIWLFG R VYKN F+ K HV
Sbjct: 147 AQCAFLDLTSQTNGTVTDDSDIWLFGGRNVYKNLFNSKRHV 187
>gi|156395868|ref|XP_001637332.1| predicted protein [Nematostella vectensis]
gi|156224443|gb|EDO45269.1| predicted protein [Nematostella vectensis]
Length = 250
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 118/171 (69%), Gaps = 9/171 (5%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SI ++Q KG D +G VPNAHL L+HR+CKLLF+++KPVFVFDGGVP LKK+
Sbjct: 27 LAVDASILMNQAIKGMRDGSGNPVPNAHLFVLFHRLCKLLFYRVKPVFVFDGGVPVLKKK 86
Query: 209 TI---------STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGE 259
T+ + L +++ L ER +Q R ++ ++ +M E+QELL+LFGVPF+V+P E
Sbjct: 87 TLVRAYLEEMQTNLNREQRTLQSERARQARASAEVSTEMLNESQELLRLFGVPFLVSPME 146
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
AEAQCA L++ T G ITDDSD++LFG R VYKN F++ H YT DI
Sbjct: 147 AEAQCAFLDMTGQTDGTITDDSDVFLFGGRRVYKNIFNQNKHAECYTCEDI 197
>gi|196004776|ref|XP_002112255.1| hypothetical protein TRIADDRAFT_23638 [Trichoplax adhaerens]
gi|190586154|gb|EDV26222.1| hypothetical protein TRIADDRAFT_23638 [Trichoplax adhaerens]
Length = 247
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 116/161 (72%), Gaps = 10/161 (6%)
Query: 143 NKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGV 202
NK+L D+S+WL++ +G D G + NAHL+GL++R+CKLLFFKI+PVFVFDGGV
Sbjct: 24 NKILA---VDISLWLNESLRGMRDHQGSLIENAHLLGLFYRLCKLLFFKIRPVFVFDGGV 80
Query: 203 PQLKKQTIS-------TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIV 255
P LKKQTIS +LE+ + L+ E +Q R+A++++ +M E QELL LFG+P+IV
Sbjct: 81 PLLKKQTISKLVDVQRSLEEQQTSLIQEHKRQERMAASVSNEMYSECQELLSLFGIPYIV 140
Query: 256 APGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFF 296
+P EAEAQCA L+ N T G ITDDSDI+LFG R +Y+ F
Sbjct: 141 SPMEAEAQCAVLDFTNQTDGTITDDSDIFLFGGRNIYRYVF 181
>gi|449676998|ref|XP_002156033.2| PREDICTED: DNA repair protein complementing XP-G cells-like,
partial [Hydra magnipapillata]
Length = 431
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 118/170 (69%), Gaps = 12/170 (7%)
Query: 153 VSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK--QTI 210
VSIWL++ KG D G V NAHL+ ++HRICKLLF+ IKPVFVFDG VP+LKK Q I
Sbjct: 1 VSIWLNKAVKGMRDKHGNQVYNAHLVLMFHRICKLLFYGIKPVFVFDGNVPELKKNTQVI 60
Query: 211 STLE----------KDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEA 260
+ +E K++ +L LE KQTR A+T++ ++ + Q+LLQLFG+P++V+P EA
Sbjct: 61 AKIEDFLKLEVELNKEKIELELETRKQTRQAATLSAEVYNDVQDLLQLFGIPYLVSPMEA 120
Query: 261 EAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
EAQCA+L L T G ITDDSDI+LFGA VYKN F+K Y++ D+
Sbjct: 121 EAQCAALNLLKLTNGTITDDSDIFLFGAENVYKNIFNKDKIPECYSSKDL 170
>gi|323456781|gb|EGB12647.1| hypothetical protein AURANDRAFT_4733, partial [Aureococcus
anophagefferens]
Length = 238
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 105/170 (61%), Gaps = 9/170 (5%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L DVSIWL Q K D G + NAHLIG R+ KLL+ ++PVFVFDGGVP +K +
Sbjct: 27 LAIDVSIWLTQFVKAMRDDEGRPIRNAHLIGTLRRVAKLLYHGVRPVFVFDGGVPVVKAR 86
Query: 209 TIS----TLEKDRD-----QLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGE 259
I EK+RD L E + +R A ++TE M + LL+L GVP++VAP E
Sbjct: 87 LIRQRQMRREKNRDDREAASLRREMSRSSRDADSVTEDMREDTMHLLRLLGVPYVVAPME 146
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPD 309
AEAQCA+LE +GV+TDDSD + FGAR VYKN FD + +V Y A D
Sbjct: 147 AEAQCAALEAAGLCEGVVTDDSDAFCFGARRVYKNIFDDRKYVEAYYASD 196
>gi|328857380|gb|EGG06497.1| hypothetical protein MELLADRAFT_36164 [Melampsora larici-populina
98AG31]
Length = 288
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 104/178 (58%), Gaps = 16/178 (8%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIWL+Q D G + NAH++G RI KLL++ IKPVFVFDGG P LKKQ
Sbjct: 23 LAIDSSIWLYQFQNAMRDREGRGLTNAHILGFLRRISKLLYYGIKPVFVFDGGAPVLKKQ 82
Query: 209 TIS----------------TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVP 252
TI ++ + ++L +R K R A + QMS++ Q +L+LFG+P
Sbjct: 83 TIVEHLYFSSIFKLDDMRHQVDAEVNKLKDQRVKDRRDADDVNLQMSKDIQSMLRLFGIP 142
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
++++P EAEAQCA L G+ITDDSD++LFG VYKN F++ V Y D+
Sbjct: 143 YVISPMEAEAQCAELLKKGLVDGIITDDSDVFLFGGTRVYKNMFNQNKFVECYLMNDL 200
>gi|357620639|gb|EHJ72769.1| hypothetical protein KGM_08405 [Danaus plexippus]
Length = 1103
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 77/105 (73%)
Query: 210 ISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
++ +E + LL E+GK R+ ITEQM++EAQELLQ+FG+P+IVAP EAEAQCA LE
Sbjct: 681 VTEIENEEQLLLQEKGKLDRIGRNITEQMTKEAQELLQIFGIPYIVAPMEAEAQCAVLEA 740
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
T G ITDDSDIWLFG RTVYKNFF++K HVL++ I F
Sbjct: 741 LKLTDGTITDDSDIWLFGGRTVYKNFFNQKKHVLQFLRERIEKSF 785
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 77/125 (61%), Gaps = 15/125 (12%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G +PNAHLIGL+ R+CKLL+F+IKPVFVFDGG P LK++
Sbjct: 27 LAVDISIWLHQMVKGYQDAKGAPLPNAHLIGLFQRLCKLLYFRIKPVFVFDGGFPDLKRE 86
Query: 209 TI-----------STLEKDRDQLLLERGKQTRLASTITEQMS----REAQELLQLFGVPF 253
TI S EK + ++ L GK+T + S + +Q+S ++ Q +F +P
Sbjct: 87 TIAKRQDNKTKYNSASEKLKREITLLLGKKTAIGSLLGKQISPTKNKQPQANDDIFKLPE 146
Query: 254 IVAPG 258
+ G
Sbjct: 147 LPEKG 151
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPPSVSREVDMFELPPAP 60
A+R+ K+K S ++K++ ++ L ++ + +LGK D+F+LP P
Sbjct: 89 AKRQDNKTKYNSASEKLKREITLLLGKKTAIGSLLGKQISPTKNKQPQANDDIFKLPELP 148
Query: 61 AQTVQDEEEDSDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTELLEQRKLSSWH 120
+ E E D D+ A DLHSVD +S++F +P ++++L EL E RK++SW
Sbjct: 149 EKGAYSESESEDEQDSSA--STVDLHSVDFDSDKFKNMPIKEKYDLLIELKETRKMNSWG 206
Query: 121 KMHEMPQ 127
K++ +P+
Sbjct: 207 KINTLPK 213
>gi|328774021|gb|EGF84058.1| hypothetical protein BATDEDRAFT_2594, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 284
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 92/166 (55%), Gaps = 10/166 (6%)
Query: 151 SDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
S SIWLHQ K G + AH+IG + RICKLLF+ I PVFVFDG P LK+QTI
Sbjct: 4 SHASIWLHQFLKAMRSRDGNLLHGAHIIGFFRRICKLLFYGILPVFVFDGATPALKRQTI 63
Query: 211 STLEKDRDQL----------LLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEA 260
++ R + +L Q R +Q LL +FG+P+IVA EA
Sbjct: 64 ASRRHRRATVEQSLRKTAERILSLQLQKRALIVNWQQRKSCVPLLLFIFGIPYIVATTEA 123
Query: 261 EAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYT 306
E+QCA L+ +G++TDDSD+++FG VYKN F + V YT
Sbjct: 124 ESQCAFLQKQGLVEGIVTDDSDVFVFGGEVVYKNMFTQTRSVEIYT 169
>gi|242019297|ref|XP_002430098.1| DNA excision repair protein, putative [Pediculus humanus corporis]
gi|212515179|gb|EEB17360.1| DNA excision repair protein, putative [Pediculus humanus corporis]
Length = 1052
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 85/117 (72%), Gaps = 4/117 (3%)
Query: 198 FDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAP 257
+ G + LKK +LE+ ++ LLLE+G Q R A T+QM +AQ LL+LFGVP+IVAP
Sbjct: 631 YAGKLEDLKK----SLEEKQNNLLLEQGNQERHALNPTDQMYSDAQALLKLFGVPYIVAP 686
Query: 258 GEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
EAEAQCA+L++ T+G ITDDSDIWLFG VYKNFF++K HVL YT+ +I+ F
Sbjct: 687 MEAEAQCAALDILGLTEGTITDDSDIWLFGGTVVYKNFFNQKKHVLEYTSLNIQKNF 743
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 83/143 (58%), Gaps = 14/143 (9%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL---------GKNEMALPPPSVSREV 51
A RK A A KVR L+KNLL+ + + +L G N ALP PS+ E
Sbjct: 89 AARKNQTGAAKLEAQKVREKLIKNLLKHEAVRQILANESSSAALGLNSFALPGPSI--EE 146
Query: 52 DMFELPPAPAQTVQD---EEEDSDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILT 108
D+++LP A +D EE + +SD E + R +++SVD+ S+ F LPP+ RHEILT
Sbjct: 147 DLYKLPAIAADYEEDSPFEETEMESDKEEDRRRIENIYSVDVTSKDFLQLPPEARHEILT 206
Query: 109 ELLEQRKLSSWHKMHEMPQNDQH 131
ELLE +K +SW + EMP+N ++
Sbjct: 207 ELLETKKQNSWKILDEMPKNSEN 229
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 47/64 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L DVSIWLHQ KG HD G V AH+I L HR+CKLLF+KIKPVFVFDGGVP LK
Sbjct: 27 LAVDVSIWLHQAIKGMHDTYGAPVAAAHIIILLHRLCKLLFYKIKPVFVFDGGVPALKHS 86
Query: 209 TIST 212
T++
Sbjct: 87 TMAA 90
>gi|195454489|ref|XP_002074261.1| GK18419 [Drosophila willistoni]
gi|194170346|gb|EDW85247.1| GK18419 [Drosophila willistoni]
Length = 1247
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Query: 208 QTIST-LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
QT++T L ++R QL LER +Q R+ +I+++MS + QELL+LFG+P+IVAP EAEAQCA
Sbjct: 839 QTMATSLAQERKQLELERNRQDRMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAF 898
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
L T G ITDDSDIWLFG RTVYKNFF + HVL + + I F
Sbjct: 899 LNATELTNGTITDDSDIWLFGGRTVYKNFFAQNKHVLEFRSEQIEQTF 946
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 58/72 (80%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+FDG VPQLK+
Sbjct: 27 LAVDISIWLHQVVKGFQDNKGSALSNAHLLGLFHRLCKLLYYRVRPVFIFDGCVPQLKRD 86
Query: 209 TISTLEKDRDQL 220
TI+ ++ R++L
Sbjct: 87 TIARRQQQRNKL 98
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 28/154 (18%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKN--EMALPPP--------SVSRE 50
A+R+ ++K ++ AD++++ LL++L +++++ LG + ++ L P S S E
Sbjct: 89 ARRQQQRNKLSNEADRIQALLLQSLAKEKVVQQALGASAEQLLLKSPGKRPAASKSKSDE 148
Query: 51 VDMFELPPAPAQTVQDEEEDSDS-----------------DDTEAKFRY-ADLHSVDINS 92
D+F+LP PA D S D++ A+ Y + L ++D+ S
Sbjct: 149 DDLFKLPELPAAASAGAAMDDSSDQDLDDTSASATSDSSFDESTARRTYDSSLQAIDVKS 208
Query: 93 EQFSALPPDMRHEILTELLEQRKLSSWHKMHEMP 126
+ F LP D+RHEILT++ E RK SSW ++HE+P
Sbjct: 209 QHFRNLPADVRHEILTDIKETRKQSSWGRLHELP 242
>gi|195473066|ref|XP_002088817.1| GE18773 [Drosophila yakuba]
gi|194174918|gb|EDW88529.1| GE18773 [Drosophila yakuba]
Length = 1237
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 75/104 (72%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++R +L +ER +Q R+ +I+++MS + QELL+LFG+P+IVAP EAEAQCA L
Sbjct: 833 SNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNAT 892
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
+ T G ITDDSDIWLFG RTVYKNFF + HVL + A I F
Sbjct: 893 DLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVLEFRAEQIEQTF 936
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 58/72 (80%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+FDG VPQLK+
Sbjct: 27 LAVDISIWLHQVVKGFQDNKGSALSNAHLLGLFHRLCKLLYYRVRPVFIFDGCVPQLKRD 86
Query: 209 TISTLEKDRDQL 220
TI+ ++ R++L
Sbjct: 87 TIARRQQQRNKL 98
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 86/147 (58%), Gaps = 21/147 (14%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMAL--------PPPSVSREVD 52
A+R+ ++K ++ AD++++ LL++L +++++ LGKN L PP + E D
Sbjct: 89 ARRQQQRNKLSNEADRIQALLLQSLAKEKVVQQALGKNAELLLKSPVKRPPPAKKNDEDD 148
Query: 53 MFELPPAPA----QTVQDEEEDSDS--------DDTEAKFRY-ADLHSVDINSEQFSALP 99
+F+LP PA Q Q E E S D++ A+ Y + L ++D+ S+ F LP
Sbjct: 149 LFKLPELPAVSEGQDGQGESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNLP 208
Query: 100 PDMRHEILTELLEQRKLSSWHKMHEMP 126
D+RHEILT++ E RK SSW ++HE+P
Sbjct: 209 ADVRHEILTDIKETRKQSSWGRLHELP 235
>gi|194863176|ref|XP_001970313.1| GG10553 [Drosophila erecta]
gi|190662180|gb|EDV59372.1| GG10553 [Drosophila erecta]
Length = 1237
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 75/104 (72%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ L ++R +L +ER +Q R+ +I+++MS + QELL+LFG+P+IVAP EAEAQCA L
Sbjct: 833 TNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNAT 892
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
+ T G ITDDSDIWLFG RTVYKNFF + HVL + A I F
Sbjct: 893 DLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVLEFRAEQIEQTF 936
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 58/72 (80%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+FDG VPQLKK
Sbjct: 27 LAVDISIWLHQVVKGFQDNKGSALSNAHLLGLFHRLCKLLYYRVRPVFIFDGCVPQLKKD 86
Query: 209 TISTLEKDRDQL 220
TI+ ++ R++L
Sbjct: 87 TIARRQQQRNKL 98
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 86/147 (58%), Gaps = 21/147 (14%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMAL--------PPPSVSREVD 52
A+R+ ++K ++ AD++++ LL++L +++++ LGKN L PP + + D
Sbjct: 89 ARRQQQRNKLSNEADRIQALLLQSLAKEKVVQQALGKNAELLLKSPVKRPPPAKKNDDDD 148
Query: 53 MFELPPAPA----QTVQDEEEDSDS--------DDTEAKFRY-ADLHSVDINSEQFSALP 99
+F+LP PA Q Q E E S D++ A+ Y + L ++D+ S+ F LP
Sbjct: 149 LFKLPELPAASEGQDNQGENEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNLP 208
Query: 100 PDMRHEILTELLEQRKLSSWHKMHEMP 126
D+RHEILT++ E RK SSW ++HE+P
Sbjct: 209 ADVRHEILTDIKETRKQSSWGRLHELP 235
>gi|194760687|ref|XP_001962569.1| GF15526 [Drosophila ananassae]
gi|190616266|gb|EDV31790.1| GF15526 [Drosophila ananassae]
Length = 1237
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ L ++R +L +ER +Q R+ +I+++MS + QELL+LFG+P+IVAP EAEAQCA L
Sbjct: 832 TNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNAA 891
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
+ T G ITDDSDIWLFG RTVYKNFF + HVL + + I F
Sbjct: 892 DLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVLEFRSEQIEQTF 935
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 58/72 (80%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+FDG VPQLK+
Sbjct: 27 LAVDISIWLHQVVKGFQDSKGSALNNAHLLGLFHRLCKLLYYRVRPVFIFDGCVPQLKRD 86
Query: 209 TISTLEKDRDQL 220
TI+ ++ R++L
Sbjct: 87 TIARRQQQRNKL 98
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 88/152 (57%), Gaps = 26/152 (17%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMAL-------PPPSVSR--EV 51
A+R+ ++K ++ AD++++ LL++L +++++ LGKN L PPP S+ E
Sbjct: 89 ARRQQQRNKLSNEADRIQALLLQSLAKEKVVQQALGKNAELLLKSPAKRPPPGKSKDNED 148
Query: 52 DMF---ELPPAPAQTVQDEEEDSDSD-------------DTEAKFRY-ADLHSVDINSEQ 94
DMF ELP A A T +E D D D ++ A+ Y + L ++D+ S+
Sbjct: 149 DMFKLPELPAAAAGTENPDESDQDMDCTSASATSDSSFDESNARHAYQSSLQAIDVKSQH 208
Query: 95 FSALPPDMRHEILTELLEQRKLSSWHKMHEMP 126
F LP D+RHEILT++ E RK SSW ++HE+P
Sbjct: 209 FRNLPADVRHEILTDIKETRKQSSWGRLHELP 240
>gi|78706850|ref|NP_001027230.1| mutagen-sensitive 201, isoform C [Drosophila melanogaster]
gi|78706852|ref|NP_001027231.1| mutagen-sensitive 201, isoform B [Drosophila melanogaster]
gi|5051952|gb|AAD38375.1|AF144092_1 nucleotide excision repair protein MUS201 [Drosophila melanogaster]
gi|7297419|gb|AAF52678.1| mutagen-sensitive 201, isoform B [Drosophila melanogaster]
gi|28380312|gb|AAO41169.1| mutagen-sensitive 201, isoform C [Drosophila melanogaster]
Length = 1236
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ L ++R +L +ER +Q R+ +I+++MS + QELL+LFG+P+IVAP EAEAQCA L
Sbjct: 832 TNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNAT 891
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
+ T G ITDDSDIWLFG RTVYKNFF + HV+ + A I F
Sbjct: 892 DLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVMEFRAEQIEQTF 935
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 58/72 (80%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+FDG VPQLK+
Sbjct: 27 LAVDISIWLHQVVKGFQDNKGSALSNAHLLGLFHRLCKLLYYRVRPVFIFDGCVPQLKRD 86
Query: 209 TISTLEKDRDQL 220
TI+ ++ R++L
Sbjct: 87 TIARRQQQRNKL 98
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 90/146 (61%), Gaps = 20/146 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMAL--------PPPSVSREVD 52
A+R+ ++K ++ AD++++ LL++L +++++ LGKN L PP + E D
Sbjct: 89 ARRQQQRNKLSNEADRIQALLLQSLAKEKVVQQALGKNAELLLKSPVKRPPPAKKNDEDD 148
Query: 53 MFELPPAPAQTVQDEEEDSDS-----------DDTEAKFRY-ADLHSVDINSEQFSALPP 100
+F+LP PA +VQD +++S+ D++ A+ Y + L ++D+ S+ F LP
Sbjct: 149 LFKLPELPAASVQDNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNLPA 208
Query: 101 DMRHEILTELLEQRKLSSWHKMHEMP 126
D+RHEILT++ E RK SSW ++HE+P
Sbjct: 209 DVRHEILTDIKETRKQSSWGRLHELP 234
>gi|328791064|ref|XP_393585.4| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Apis mellifera]
Length = 1094
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 83/124 (66%), Gaps = 4/124 (3%)
Query: 191 KIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFG 250
KI P+ + + + L+ Q LEK + +L+ GK R I++Q+ EAQELLQLFG
Sbjct: 688 KISPIPMNENELLSLQTQ----LEKQQTKLIANIGKLERQGIDISDQIRIEAQELLQLFG 743
Query: 251 VPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
+P++VAP EAEAQCA LE + T G ITDDSDIWLFG + VYKNFFD VL + A DI
Sbjct: 744 IPYLVAPMEAEAQCAYLEQIHLTDGTITDDSDIWLFGGQCVYKNFFDNNKKVLEFRACDI 803
Query: 311 RYYF 314
++YF
Sbjct: 804 QHYF 807
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 60/93 (64%), Gaps = 11/93 (11%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIW+HQ+ +G D G PNAHLIGL+HRICKLL++KIKP+FVFDGGVP LKK
Sbjct: 27 LAIDISIWIHQVLQGYQDRFGNPKPNAHLIGLFHRICKLLYYKIKPIFVFDGGVPMLKKD 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSRE 241
TI+ R KQ +A +QM E
Sbjct: 87 TIAL-----------RRKQKSMAKNKAQQMRTE 108
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 21/147 (14%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGK------NEMALPPPSVSREV--- 51
A R+ KS A + A ++R++L+ NL++ + L NE + S+ +
Sbjct: 89 ALRRKQKSMAKNKAQQMRTELINNLIKHSTVKTALNTEMQNITNESSEVITSLKNKQTVD 148
Query: 52 DMFELPPAP----AQTVQDEEEDSDSDDT-------EAKFRYADLHSVDINSEQFSALPP 100
DMF+LP P A++ ++ DS SD + + K+ ++H+VD+ S +F LP
Sbjct: 149 DMFKLPNMPSTSKAESSSNDVYDSFSDSSDELSPRKQTKW-IGNIHNVDVTSAEFKDLPA 207
Query: 101 DMRHEILTELLEQRKLSSWHKMHEMPQ 127
D+R+EILT+L E RK SSW ++HEMP+
Sbjct: 208 DVRYEILTDLKETRKQSSWGRLHEMPE 234
>gi|5712619|gb|AAD47568.1|AF125578_1 DNA repair endonuclease [Drosophila melanogaster]
Length = 1236
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ L ++R +L +ER +Q R+ +I+++MS + QELL+LFG+P+IVAP EAEAQCA L
Sbjct: 832 TNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNAT 891
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
+ T G ITDDSDIWLFG RTVYKNFF + HV+ + A I F
Sbjct: 892 DLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVMEFRAEQIEQTF 935
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 58/72 (80%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+FDG VPQLK+
Sbjct: 27 LAVDISIWLHQVVKGFQDNKGSALSNAHLLGLFHRLCKLLYYRVRPVFIFDGCVPQLKRD 86
Query: 209 TISTLEKDRDQL 220
TI+ ++ R++L
Sbjct: 87 TIARRQQQRNKL 98
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 90/146 (61%), Gaps = 20/146 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMAL--------PPPSVSREVD 52
A+R+ ++K ++ AD++++ LL++L +++++ LGKN L PP + E D
Sbjct: 89 ARRQQQRNKLSNEADRIQALLLQSLAKEKVVQQALGKNAELLLKSPVKRPPPAKKNDEDD 148
Query: 53 MFELPPAPAQTVQDEEEDSDS-----------DDTEAKFRY-ADLHSVDINSEQFSALPP 100
+F+LP PA +VQD +++S+ D++ A+ Y + L ++D+ S+ F LP
Sbjct: 149 LFKLPELPAASVQDNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNLPA 208
Query: 101 DMRHEILTELLEQRKLSSWHKMHEMP 126
D+RHEILT++ E RK SSW ++HE+P
Sbjct: 209 DVRHEILTDIKETRKQSSWGRLHELP 234
>gi|195030390|ref|XP_001988051.1| GH10954 [Drosophila grimshawi]
gi|193904051|gb|EDW02918.1| GH10954 [Drosophila grimshawi]
Length = 1183
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 72/102 (70%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
L K+R +L ER +Q R+ +I+++MS + QELL+LFG+P+IVAP EAEAQCA L
Sbjct: 766 LAKERRELEAERNRQDRMGMSISQRMSNDCQELLRLFGIPYIVAPMEAEAQCAFLNAVEI 825
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
T G ITDDSDIWLFG RTVYKNFF + HVL + A I F
Sbjct: 826 TNGTITDDSDIWLFGGRTVYKNFFAQNKHVLEFRAEQIEQTF 867
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 57/72 (79%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+FDG VPQLK+
Sbjct: 27 LAVDISIWLHQVVKGFQDSKGSALNNAHLLGLFHRLCKLLYYRVRPVFIFDGSVPQLKRD 86
Query: 209 TISTLEKDRDQL 220
TI+ ++ R +L
Sbjct: 87 TIARRQQQRSKL 98
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 88/155 (56%), Gaps = 29/155 (18%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKN-EMALPPP---------SVSRE 50
A+R+ +SK ++ AD++++ LL++L +++++ LG N EM L P S + E
Sbjct: 89 ARRQQQRSKLSNEADRIQALLLQSLAKEKVVQQALGTNAEMLLKSPIKRGAAAKSSKTDE 148
Query: 51 VDMFELPPAPA-----QTVQDEEEDSDS-------------DDTEAKFRY-ADLHSVDIN 91
D+F+LP PA Q + + ED D D++ A+ Y A L ++D+
Sbjct: 149 DDLFKLPELPATSSSAQISESDYEDQDQEYASTSATSDSSFDESTARHSYNASLQAIDVR 208
Query: 92 SEQFSALPPDMRHEILTELLEQRKLSSWHKMHEMP 126
S+ F LP D+RHEILT++ E RK SSW ++HE+P
Sbjct: 209 SQHFKNLPADVRHEILTDIKETRKQSSWGRLHELP 243
>gi|5758314|gb|AAD50779.1|AF162792_1 XPG [Drosophila melanogaster]
Length = 1236
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ L ++R +L +ER +Q R+ +I+++MS + QELL+LFG+P+IVAP EAEAQCA L
Sbjct: 832 TNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNAT 891
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
+ T G ITDDSDIWLFG RTVYKNFF + HV+ + A I F
Sbjct: 892 DLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVMEFRAEQIEQTF 935
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 58/72 (80%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+FDG VPQLK+
Sbjct: 27 LAVDISIWLHQVVKGFQDNKGSALSNAHLLGLFHRLCKLLYYRVRPVFIFDGCVPQLKRD 86
Query: 209 TISTLEKDRDQL 220
TI+ ++ R++L
Sbjct: 87 TIARRQQQRNKL 98
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 90/146 (61%), Gaps = 20/146 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMAL--------PPPSVSREVD 52
A+R+ ++K ++ AD++++ LL++L +++++ LGKN L PP + E D
Sbjct: 89 ARRQQQRNKLSNEADRIQALLLQSLAKEKVVQQALGKNAELLLKSPVKRPPPAKKNDEDD 148
Query: 53 MFELPPAPAQTVQDEEEDSDS-----------DDTEAKFRY-ADLHSVDINSEQFSALPP 100
+F+LP PA +VQ+ +++S+ D++ A+ Y + L ++D+ S+ F LP
Sbjct: 149 LFKLPELPAASVQNNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNLPA 208
Query: 101 DMRHEILTELLEQRKLSSWHKMHEMP 126
D+RHEILT++ E RK SSW ++HE+P
Sbjct: 209 DVRHEILTDIKETRKQSSWGRLHELP 234
>gi|195577623|ref|XP_002078668.1| GD23543 [Drosophila simulans]
gi|194190677|gb|EDX04253.1| GD23543 [Drosophila simulans]
Length = 1235
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ L ++R +L +ER +Q R+ +I+++MS + QELL+LFG+P+IVAP EAEAQCA L
Sbjct: 831 TNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNAT 890
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
+ T G ITDDSDIWLFG RTVYKNFF + HV+ + A I F
Sbjct: 891 DLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVMEFRAEQIEQTF 934
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 58/72 (80%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+FDG VPQLK+
Sbjct: 27 LAVDISIWLHQVVKGFQDNKGSALSNAHLLGLFHRLCKLLYYRVRPVFIFDGCVPQLKRD 86
Query: 209 TISTLEKDRDQL 220
TI+ ++ R++L
Sbjct: 87 TIARRQQQRNKL 98
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 89/146 (60%), Gaps = 20/146 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMAL--------PPPSVSREVD 52
A+R+ ++K ++ AD++++ LL++L +++++ LGKN L PP + E D
Sbjct: 89 ARRQQQRNKLSNEADRIQALLLQSLAKEKVVQQALGKNAELLLKSPVKRPPPAKKNDEDD 148
Query: 53 MFELPPAPAQTVQDEEEDSDS-----------DDTEAKFRY-ADLHSVDINSEQFSALPP 100
+F+LP PA VQD +++S+ D++ A+ Y + L ++D+ S+ F LP
Sbjct: 149 LFKLPELPAAAVQDNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNLPA 208
Query: 101 DMRHEILTELLEQRKLSSWHKMHEMP 126
D+RHEILT++ E RK SSW ++HE+P
Sbjct: 209 DVRHEILTDIKETRKQSSWGRLHELP 234
>gi|78706854|ref|NP_001027232.1| mutagen-sensitive 201, isoform A [Drosophila melanogaster]
gi|10728671|gb|AAG22424.1| mutagen-sensitive 201, isoform A [Drosophila melanogaster]
Length = 1257
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ L ++R +L +ER +Q R+ +I+++MS + QELL+LFG+P+IVAP EAEAQCA L
Sbjct: 853 TNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNAT 912
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
+ T G ITDDSDIWLFG RTVYKNFF + HV+ + A I F
Sbjct: 913 DLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVMEFRAEQIEQTF 956
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Query: 143 NKLLVDLIS----DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVF 198
N++L D + D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+F
Sbjct: 38 NEILADWSTFRPADISIWLHQVVKGFQDNKGSALSNAHLLGLFHRLCKLLYYRVRPVFIF 97
Query: 199 DGGVPQLKKQTISTLEKDRDQL 220
DG VPQLK+ TI+ ++ R++L
Sbjct: 98 DGCVPQLKRDTIARRQQQRNKL 119
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 90/146 (61%), Gaps = 20/146 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMAL--------PPPSVSREVD 52
A+R+ ++K ++ AD++++ LL++L +++++ LGKN L PP + E D
Sbjct: 110 ARRQQQRNKLSNEADRIQALLLQSLAKEKVVQQALGKNAELLLKSPVKRPPPAKKNDEDD 169
Query: 53 MFELPPAPAQTVQDEEEDSDS-----------DDTEAKFRY-ADLHSVDINSEQFSALPP 100
+F+LP PA +VQD +++S+ D++ A+ Y + L ++D+ S+ F LP
Sbjct: 170 LFKLPELPAASVQDNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNLPA 229
Query: 101 DMRHEILTELLEQRKLSSWHKMHEMP 126
D+RHEILT++ E RK SSW ++HE+P
Sbjct: 230 DVRHEILTDIKETRKQSSWGRLHELP 255
>gi|5758316|gb|AAD50780.1|AF162793_1 XPG variant [Drosophila melanogaster]
Length = 1257
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ L ++R +L +ER +Q R+ +I+++MS + QELL+LFG+P+IVAP EAEAQCA L
Sbjct: 853 TNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNAT 912
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
+ T G ITDDSDIWLFG RTVYKNFF + HV+ + A I F
Sbjct: 913 DLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVMEFRAEQIEQTF 956
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Query: 143 NKLLVDLIS----DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVF 198
N++L D + D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+F
Sbjct: 38 NEILADWSTFRPADISIWLHQVVKGFQDNKGSALSNAHLLGLFHRLCKLLYYRVRPVFIF 97
Query: 199 DGGVPQLKKQTISTLEKDRDQL 220
DG VPQLK+ TI+ ++ R++L
Sbjct: 98 DGCVPQLKRDTIARRQQQRNKL 119
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 90/146 (61%), Gaps = 20/146 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMAL--------PPPSVSREVD 52
A+R+ ++K ++ AD++++ LL++L +++++ LGKN L PP + E D
Sbjct: 110 ARRQQQRNKLSNEADRIQALLLQSLAKEKVVQQALGKNAELLLKSPVKRPPPAKKNDEDD 169
Query: 53 MFELPPAPAQTVQDEEEDSDS-----------DDTEAKFRY-ADLHSVDINSEQFSALPP 100
+F+LP PA +VQ+ +++S+ D++ A+ Y + L ++D+ S+ F LP
Sbjct: 170 LFKLPELPAASVQNNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNLPA 229
Query: 101 DMRHEILTELLEQRKLSSWHKMHEMP 126
D+RHEILT++ E RK SSW ++HE+P
Sbjct: 230 DVRHEILTDIKETRKQSSWGRLHELP 255
>gi|195339243|ref|XP_002036229.1| GM16947 [Drosophila sechellia]
gi|194130109|gb|EDW52152.1| GM16947 [Drosophila sechellia]
Length = 1108
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ L ++R +L +ER +Q R+ +I+++MS + QELL+LFG+P+IVAP EAEAQCA L
Sbjct: 704 TNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNAT 763
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
+ T G ITDDSDIWLFG RTVYKNFF + HV+ + A I F
Sbjct: 764 DLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVMEFRAEQIEQTF 807
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 58/72 (80%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+FDG VPQLK+
Sbjct: 27 LAVDISIWLHQVVKGFQDNKGSTLSNAHLLGLFHRLCKLLYYRVRPVFIFDGCVPQLKRD 86
Query: 209 TISTLEKDRDQL 220
TI+ ++ R++L
Sbjct: 87 TITRRQQQRNKL 98
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 89/145 (61%), Gaps = 20/145 (13%)
Query: 2 QRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMAL--------PPPSVSREVDM 53
+R+ ++K ++ AD++++ LL++L +++++ LGKN L PP + E D+
Sbjct: 90 RRQQQRNKLSNEADRIQALLLQSLAKEKVVQQALGKNAELLLKSPVKRPPPAKKNDEDDL 149
Query: 54 FELPPAPAQTVQDEEEDSDS-----------DDTEAKFRY-ADLHSVDINSEQFSALPPD 101
F+LP PA +VQD +++S+ D++ A+ Y + L ++D+ S+ F LP D
Sbjct: 150 FKLPELPAASVQDNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNLPAD 209
Query: 102 MRHEILTELLEQRKLSSWHKMHEMP 126
+RHEILT++ E RK SSW ++HE+P
Sbjct: 210 VRHEILTDIKETRKQSSWGRLHELP 234
>gi|195397917|ref|XP_002057574.1| GJ18024 [Drosophila virilis]
gi|194141228|gb|EDW57647.1| GJ18024 [Drosophila virilis]
Length = 1238
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 74/104 (71%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
++L ++R +L ER +Q R+ +I+++MS + QELL+LFG+P+IVAP EAEAQCA L
Sbjct: 847 TSLAQERRELEAERNRQDRMGMSISQRMSNDCQELLRLFGIPYIVAPMEAEAQCAFLNAV 906
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
T G ITDDSDIWLFG RTVYKNFF + HVL + A I F
Sbjct: 907 GITNGTITDDSDIWLFGGRTVYKNFFAQNKHVLEFRAEQIEQTF 950
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 100/196 (51%), Gaps = 34/196 (17%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+FDGGVPQLK+
Sbjct: 27 LAVDISIWLHQVVKGFQDSKGSALNNAHLLGLFHRLCKLLYYRVRPVFIFDGGVPQLKRD 86
Query: 209 TIS---------TLEKDRDQLLL------ERGKQTRLAST------------ITEQMSRE 241
TI+ + E DR Q LL E+ Q L + +T + S++
Sbjct: 87 TIARRQQQRGKISNEADRIQALLLQSLAKEKVVQQALGTNAELLLKSPSKRAVTGKSSKD 146
Query: 242 AQELLQLFGVPFIVAPGEAEAQCASLELGNH--TQGVITDDSDIWLFGARTVYK---NFF 296
++ LF +P + A+ + EL N T G T DS AR Y
Sbjct: 147 DED--DLFKLPELPEASAAQIGESDCELDNQEFTGGNTTSDSSFDESTARHTYNASLQGI 204
Query: 297 DKKSHVLRYTAPDIRY 312
D +S + DIR+
Sbjct: 205 DVRSQHFKSLPADIRH 220
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 86/154 (55%), Gaps = 28/154 (18%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKN-EMALPPPSVSR---------E 50
A+R+ + K ++ AD++++ LL++L +++++ LG N E+ L PS E
Sbjct: 89 ARRQQQRGKISNEADRIQALLLQSLAKEKVVQQALGTNAELLLKSPSKRAVTGKSSKDDE 148
Query: 51 VDMFELPPAP-AQTVQDEEED--------------SDS--DDTEAKFRY-ADLHSVDINS 92
D+F+LP P A Q E D SDS D++ A+ Y A L +D+ S
Sbjct: 149 DDLFKLPELPEASAAQIGESDCELDNQEFTGGNTTSDSSFDESTARHTYNASLQGIDVRS 208
Query: 93 EQFSALPPDMRHEILTELLEQRKLSSWHKMHEMP 126
+ F +LP D+RHEILT++ E RK SSW ++HE+P
Sbjct: 209 QHFKSLPADIRHEILTDIKETRKQSSWGRLHELP 242
>gi|148226745|ref|NP_001081629.1| DNA repair protein complementing XP-G cells homolog [Xenopus
laevis]
gi|50416246|gb|AAH77363.1| XPGC protein [Xenopus laevis]
Length = 1197
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 69/91 (75%)
Query: 220 LLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITD 279
L +R +Q R+A+T+T QM E+QELLQLFG+P+IVAP EAEAQCA L+L + T G ITD
Sbjct: 784 LQAQRQQQERIAATVTGQMCLESQELLQLFGIPYIVAPMEAEAQCAILDLTDQTSGTITD 843
Query: 280 DSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
DSDIWLFGAR VYKNFF + HV Y DI
Sbjct: 844 DSDIWLFGARHVYKNFFSQNKHVEYYQYADI 874
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 52/71 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G ++ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LK+Q
Sbjct: 27 LAVDISIWLNQAVKGARDRQGNAIQNAHLLTLFHRLCKLLFFRIRPIFVFDGEAPLLKRQ 86
Query: 209 TISTLEKDRDQ 219
T++ + D+
Sbjct: 87 TLAKRRQRTDK 97
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 14/124 (11%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMA---LPPPS-VSREV--DMF 54
A+R+ KA+++A K LL+ L++Q + L N+ + LP S V R+ D++
Sbjct: 89 AKRRQRTDKASNDARKTSEKLLRTFLKRQAIKAALSGNKQSNEELPSFSQVPRKETEDLY 148
Query: 55 ELPP---APAQTVQDEEEDSDSDDTEAKFR-----YADLHSVDINSEQFSALPPDMRHEI 106
LPP + ++EEE + K R +A+ SVDI SE+F +LPP+++HEI
Sbjct: 149 ILPPLEDNENNSSEEEEEREWEERMNQKQRLQEDFFANPSSVDIESEEFKSLPPEVKHEI 208
Query: 107 LTEL 110
LT++
Sbjct: 209 LTDM 212
>gi|198476637|ref|XP_002132415.1| GA25201 [Drosophila pseudoobscura pseudoobscura]
gi|198137788|gb|EDY69817.1| GA25201 [Drosophila pseudoobscura pseudoobscura]
Length = 1236
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 72/102 (70%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
L ++R L +ER +Q R+ +I+++MS + QELL+LFG+P+IVAP EAEAQCA L
Sbjct: 834 LAQERKDLEIERNRQDRMGMSISQRMSTDCQELLRLFGIPYIVAPMEAEAQCAFLNATEL 893
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
T G ITDDSDIWLFG RTVYKNFF + HVL + A I F
Sbjct: 894 THGTITDDSDIWLFGGRTVYKNFFAQNKHVLEFRAEQIEQTF 935
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+FDG PQLK+
Sbjct: 27 LAVDISIWLHQVVKGFQDNKGSALNNAHLLGLFHRLCKLLYYRVRPVFIFDGCTPQLKRD 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSRE 241
TI+ ++ R++L E R+ + + + ++RE
Sbjct: 87 TIARRQQQRNKLSNE---ADRIQALLLQSLARE 116
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 142/298 (47%), Gaps = 49/298 (16%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMAL-------PPPSVSR--EV 51
A+R+ ++K ++ AD++++ LL++L ++++ LGKN L PPPS S+ E
Sbjct: 89 ARRQQQRNKLSNEADRIQALLLQSLAREKVVQQALGKNAELLLKSPVKRPPPSKSKNDED 148
Query: 52 DMFELPPAPAQTV-QDEEEDSDSD---------------DTEAKFRY-ADLHSVDINSEQ 94
D+F+LP PA QD ++SD D ++ A+ Y + L ++D+ S+
Sbjct: 149 DLFKLPELPALAAGQDNPDESDQDLDYTSASATSDSSFDESTARHAYNSSLQAIDVKSQN 208
Query: 95 FSALPPDMRHEILTELLEQRKLSSWHKMHEMPQNDQHSMLEFRCNIVINKLLVDLISDVS 154
F LP D+RHEILT++ E RK SSW ++HE+P +F C+ + +LL S
Sbjct: 209 FKNLPADVRHEILTDIKETRKQSSWGRLHELPARSD----DF-CSFQMKRLLKRRAVQES 263
Query: 155 IWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLE 214
+ + G H L Y +C FF + + V + Q +Q IS+ E
Sbjct: 264 LEQAEQEMGGHTLT------------YSELCD--FFSEEGI-VTPTAIEQSTRQ-ISSDE 307
Query: 215 KDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
R LL+ K+ L ST TE M E E L P ++ ++E+G
Sbjct: 308 HTR-FLLVRDLKKKALESTKTE-MKMETIEELPETKPPVDEETPSTSSKAETVEMGTE 363
>gi|195155670|ref|XP_002018724.1| GL25951 [Drosophila persimilis]
gi|194114877|gb|EDW36920.1| GL25951 [Drosophila persimilis]
Length = 1238
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 72/102 (70%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
L ++R L +ER +Q R+ +I+++MS + QELL+LFG+P+IVAP EAEAQCA L
Sbjct: 836 LAQERKDLEIERNRQDRMGMSISQRMSTDCQELLRLFGIPYIVAPMEAEAQCAFLNATEL 895
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
T G ITDDSDIWLFG RTVYKNFF + HVL + A I F
Sbjct: 896 THGTITDDSDIWLFGGRTVYKNFFAQNKHVLEFRAEQIEQTF 937
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+FDG PQLK+
Sbjct: 27 LAVDISIWLHQVVKGFQDNKGSALNNAHLLGLFHRLCKLLYYRVRPVFIFDGCTPQLKRD 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSRE 241
TI+ ++ R++L E R+ + + + ++RE
Sbjct: 87 TIARRQQQRNKLSNE---ADRIQALLLQSLARE 116
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 142/298 (47%), Gaps = 49/298 (16%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMAL-------PPPSVSR--EV 51
A+R+ ++K ++ AD++++ LL++L ++++ LGKN L PPPS S+ E
Sbjct: 89 ARRQQQRNKLSNEADRIQALLLQSLAREKVVQQALGKNAELLLKSPVKRPPPSKSKNDED 148
Query: 52 DMFELPPAPAQTV-QDEEEDSDSD---------------DTEAKFRY-ADLHSVDINSEQ 94
D+F+LP PA QD ++SD D ++ A+ Y + L ++D+ S+
Sbjct: 149 DLFKLPELPALAAGQDNPDESDQDLDYTSASATSDSSFDESTARHAYNSSLQAIDVKSQN 208
Query: 95 FSALPPDMRHEILTELLEQRKLSSWHKMHEMPQNDQHSMLEFRCNIVINKLLVDLISDVS 154
F LP D+RHEILT++ E RK SSW ++HE+P +F C+ + +LL S
Sbjct: 209 FKNLPADVRHEILTDIKETRKQSSWGRLHELPARSD----DF-CSFQMKRLLKRRAVQES 263
Query: 155 IWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLE 214
+ + G H L Y +C FF + + V + Q +Q IS+ E
Sbjct: 264 LEQAEQEMGGHTLT------------YSELCD--FFSEEGI-VTPTAIEQSTRQ-ISSDE 307
Query: 215 KDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
R LL+ K+ L ST TE M E E L P ++ ++E+G
Sbjct: 308 HTR-FLLVRDLKKKALESTKTE-MKMETIEELPETKPPVDEEKPSTSSKAETVEMGTE 363
>gi|51092043|gb|AAT94435.1| RE62451p [Drosophila melanogaster]
Length = 932
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 74/100 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ L ++R +L +ER +Q R+ +I+++MS + QELL+LFG+P+IVAP EAEAQCA L
Sbjct: 832 TNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNAT 891
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
+ T G ITDDSDIWLFG RTVYKNFF + HV+ + A I
Sbjct: 892 DLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVMEFRAEQI 931
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 58/72 (80%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+FDG VPQLK+
Sbjct: 27 LAVDISIWLHQVVKGFQDNKGSALSNAHLLGLFHRLCKLLYYRVRPVFIFDGCVPQLKRD 86
Query: 209 TISTLEKDRDQL 220
TI+ ++ R++L
Sbjct: 87 TIARRQQQRNKL 98
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 90/146 (61%), Gaps = 20/146 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMAL--------PPPSVSREVD 52
A+R+ ++K ++ AD++++ LL++L +++++ LGKN L PP + E D
Sbjct: 89 ARRQQQRNKLSNEADRIQALLLQSLAKEKVVQQALGKNAELLLKSPVKRPPPAKKNDEDD 148
Query: 53 MFELPPAPAQTVQDEEEDSDS-----------DDTEAKFRY-ADLHSVDINSEQFSALPP 100
+F+LP PA +VQD +++S+ D++ A+ Y + L ++D+ S+ F LP
Sbjct: 149 LFKLPELPAASVQDNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNLPA 208
Query: 101 DMRHEILTELLEQRKLSSWHKMHEMP 126
D+RHEILT++ E RK SSW ++HE+P
Sbjct: 209 DVRHEILTDIKETRKQSSWGRLHELP 234
>gi|195116755|ref|XP_002002917.1| GI10377 [Drosophila mojavensis]
gi|193913492|gb|EDW12359.1| GI10377 [Drosophila mojavensis]
Length = 1255
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 72/104 (69%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ L +R +L ER +Q R+ +I+++MS + Q+LL+LFG+P+IVAP EAEAQCA L
Sbjct: 840 NNLAGERRELEAERNRQDRMGLSISQRMSSDCQDLLRLFGIPYIVAPMEAEAQCAFLNAV 899
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
T G ITDDSDIWLFG RTVYKNFF + HVL + A I F
Sbjct: 900 GITNGTITDDSDIWLFGGRTVYKNFFAQNKHVLEFRAEQIEKTF 943
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 58/72 (80%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+FDGGVPQLK+
Sbjct: 27 LAIDISIWLHQVVKGFQDSKGSALNNAHLLGLFHRLCKLLYYRVRPVFIFDGGVPQLKRD 86
Query: 209 TISTLEKDRDQL 220
TI+ + R++L
Sbjct: 87 TIARRHQQRNKL 98
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 33/195 (16%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKN-EMALPPP---------SVSRE 50
A+R ++K ++ AD++++ LL++L +++++ LGKN E+ L P + + E
Sbjct: 89 ARRHQQRNKLSNEADRIQALLLQSLAKEKVVQQALGKNAELLLKSPGKRLAAEKSNKNDE 148
Query: 51 VDMFELPPAPAQT---VQDEEEDSDS--------------DDTEAKFRY-ADLHSVDINS 92
D+F+LP PA T + D ED DS D++ A+ Y A L ++D+ S
Sbjct: 149 DDLFKLPELPAATAAQLNDSNEDFDSENYDGATTTSDSSFDESNARRTYDASLQAIDVRS 208
Query: 93 EQFSALPPDMRHEILTELLEQRKLSSWHKMHEMPQNDQHSMLEFRCNIVINKLLVDLISD 152
+ F LP D+RHEILT++ E RK SSW ++HE+P EF C+ + +LL
Sbjct: 209 QHFKNLPADVRHEILTDIKETRKQSSWGRLHELPARSD----EF-CSFQMKRLLKRRAVQ 263
Query: 153 VSIWLHQLTKGTHDL 167
S+ Q G H L
Sbjct: 264 ESLEEAQQEMGGHTL 278
>gi|229577369|ref|NP_001153363.1| mutagen-sensitive 201 [Nasonia vitripennis]
Length = 1167
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 71/102 (69%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
LE ++ ++ GK R A IT+QM EAQELL+LFGVP+IVAP EAEAQCA LE
Sbjct: 749 LESEQQKITSSLGKLERQAIDITDQMRLEAQELLRLFGVPYIVAPMEAEAQCAYLEQIKL 808
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
T G ITDDSDIWLFG VYKNFFD VL++ + DI ++F
Sbjct: 809 TDGTITDDSDIWLFGGHCVYKNFFDNNKRVLQFLSQDIEHHF 850
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 55/67 (82%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIW+HQ+ +G D G ++PNAHLIGL++RICKL++FKIKPVFVFDGGVP LKK
Sbjct: 27 LAIDISIWIHQVIQGYQDRRGNALPNAHLIGLFNRICKLMYFKIKPVFVFDGGVPLLKKN 86
Query: 209 TISTLEK 215
TI+T K
Sbjct: 87 TIATRRK 93
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 19/145 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGK--------------NEMALPPPS 46
A R+ LKS AAS A K+++DL+ NL+++ + L K + A+P S
Sbjct: 89 ATRRKLKSIAASKAQKLKNDLINNLIKRTAVKGALEKGNDDGESSAAQQFKDATAIPGSS 148
Query: 47 VSREVDMFELPPAPAQTVQDEEEDSDSDDTEAKFR-----YADLHSVDINSEQFSALPPD 101
+ A D + D TE R ++HSVD+N+E+F LP D
Sbjct: 149 KFKTCTNCLKCQALVGDSDDYMDSDDEIQTELSPRKQTKWMGNIHSVDVNTEEFKNLPAD 208
Query: 102 MRHEILTELLEQRKLSSWHKMHEMP 126
+R++ILT+L E RK +SW ++HE+P
Sbjct: 209 VRYDILTDLKETRKQNSWGRIHELP 233
>gi|307206657|gb|EFN84629.1| DNA-repair protein complementing XP-G cells [Harpegnathos saltator]
Length = 1139
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 79/114 (69%), Gaps = 4/114 (3%)
Query: 201 GVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEA 260
G +LK Q LE ++++L GK R A+ I+EQ+ EAQELL+LFG+P++VAP EA
Sbjct: 731 GWVELKDQ----LEDEQEELTRNIGKLERQATNISEQIRIEAQELLRLFGIPYVVAPMEA 786
Query: 261 EAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
EAQCA LE T G ITDDSDIWLFG R VYKNFF+ V ++ A DI+++F
Sbjct: 787 EAQCAYLEQIKLTDGTITDDSDIWLFGGRCVYKNFFNNSKRVQQFRACDIQHHF 840
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 11/90 (12%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L DVSIW++Q+ +G + G S PNAHL+GLY RICKLL+++IKPVFVFDGGVP LKK
Sbjct: 27 LAIDVSIWIYQVLQGYQNQHGASKPNAHLLGLYTRICKLLYYRIKPVFVFDGGVPMLKKN 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQM 238
TI++ R KQ +A++ ++M
Sbjct: 87 TIAS-----------RRKQKSIATSKAQKM 105
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 21/151 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL----------GKNEMALPPPSVSRE 50
A R+ KS A S A K+++DL+ NL++ ++ VL G ++ + E
Sbjct: 89 ASRRKQKSIATSKAQKMKADLINNLIKHSVVKTVLNKDSKVDQINGTTQITINLQGKHAE 148
Query: 51 VDMFELPPAPAQT-----VQDEEEDSD-----SDDTEAKFRYADLHSVDINSEQFSALPP 100
DMF LP P+ + V DEE DSD S ++K+ ++H+VD+ + +F ALP
Sbjct: 149 PDMFALPDMPSTSGLQTFVNDEEYDSDASVELSPRKQSKW-MGNIHNVDVTTGEFKALPA 207
Query: 101 DMRHEILTELLEQRKLSSWHKMHEMPQNDQH 131
D+R++ILT+L E RK +SW ++HEMP+ Q
Sbjct: 208 DVRYDILTDLRETRKQNSWGRLHEMPEESQE 238
>gi|267421|sp|P14629.1|ERCC5_XENLA RecName: Full=DNA repair protein complementing XP-G cells homolog;
AltName: Full=Xeroderma pigmentosum group
G-complementing protein homolog
gi|312433|emb|CAA49597.1| XP-G related factor [Xenopus laevis]
Length = 1196
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 64/82 (78%)
Query: 229 RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
R+A+T+T QM E+QELLQLFG+P+IVAP EAEAQCA L+L + T G ITDDSDIWLFGA
Sbjct: 792 RIAATVTGQMCLESQELLQLFGIPYIVAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGA 851
Query: 289 RTVYKNFFDKKSHVLRYTAPDI 310
R VYKNFF + HV Y DI
Sbjct: 852 RHVYKNFFSQNKHVEYYQYADI 873
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 52/71 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G ++ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LK+Q
Sbjct: 27 LAVDISIWLNQAVKGARDRQGNAIQNAHLLTLFHRLCKLLFFRIRPIFVFDGEAPLLKRQ 86
Query: 209 TISTLEKDRDQ 219
T++ + D+
Sbjct: 87 TLAKRRQRTDK 97
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 14/124 (11%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMA---LPPPS-VSREV--DMF 54
A+R+ KA+++A K LL+ L++Q + L N+ + LP S V R+ D++
Sbjct: 89 AKRRQRTDKASNDARKTNEKLLRTFLKRQAIKAALSGNKQSNEELPSFSQVPRKETEDLY 148
Query: 55 ELPP---APAQTVQDEEEDSDSDDTEAKFR-----YADLHSVDINSEQFSALPPDMRHEI 106
LPP + ++EEE + K R +A+ SVDI SE+F +LPP+++HEI
Sbjct: 149 ILPPLEDNENNSSEEEEEREWEERMNQKQRLQEDFFANPSSVDIESEEFKSLPPEVKHEI 208
Query: 107 LTEL 110
LT++
Sbjct: 209 LTDM 212
>gi|348516587|ref|XP_003445820.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Oreochromis niloticus]
Length = 1119
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 76/101 (75%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S+L+ ++ L ++ +Q R+A+T+T QM E+QELL+LFGVP++VAP EAEAQCA+L+
Sbjct: 700 SSLQVEQSNLREQKQQQERMANTVTGQMYLESQELLRLFGVPYLVAPMEAEAQCAALDWA 759
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
+HT G ITDDSD+WLFG R VYKNFF + +V Y D++
Sbjct: 760 DHTHGTITDDSDVWLFGGRHVYKNFFSQDKYVEHYQYSDLQ 800
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 55/75 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G SV NAHL+ L+HRICKLLFF+I+PVFVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQAVKGVRDREGNSVHNAHLLTLFHRICKLLFFRIRPVFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRDQLLLE 223
T++ + +++L E
Sbjct: 87 TLALRRQRKEELTRE 101
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 20/140 (14%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPPSVS----REVD-MFE 55
A R+ K + + LLK L++Q + LG + P PS+S EVD M+
Sbjct: 89 ALRRQRKEELTRESRNTNEKLLKTFLKRQAIKAALGDHSKE-PLPSLSSVRRNEVDDMYV 147
Query: 56 LPPAPAQTVQDEEEDSDSDD-------TEAKFRY-----ADLHSVDINSEQFSALPPDMR 103
LP P + + + ++ ++ + Y D +S+DINSE+F++LPP+M+
Sbjct: 148 LPALPPAEEKAKSSSEEEEEEREEEEMVDSYYMYQGEVCEDPNSMDINSEEFASLPPEMK 207
Query: 104 HEILTELLE--QRKLSSWHK 121
HEIL ++ E +R+ + +HK
Sbjct: 208 HEILKDMKEFSKRRRTMFHK 227
>gi|380025170|ref|XP_003696351.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Apis florea]
Length = 1095
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 81/124 (65%), Gaps = 4/124 (3%)
Query: 191 KIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFG 250
KI P+ + + + L+ Q LE + +L+ GK R I++Q+ EAQELL+LFG
Sbjct: 683 KISPIPMNENELLSLQAQ----LEDKQTELIANIGKLERQGIDISDQIRIEAQELLKLFG 738
Query: 251 VPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
+P++VAP EAEAQCA LE + T G ITDDSDIWLFG + VYKNFFD VL + A DI
Sbjct: 739 IPYLVAPMEAEAQCAYLEQIHLTDGTITDDSDIWLFGGQCVYKNFFDNNKKVLEFRACDI 798
Query: 311 RYYF 314
+ YF
Sbjct: 799 QRYF 802
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 81/143 (56%), Gaps = 28/143 (19%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIW+HQ+ +G D G PNAHLIGL+HRICKLL++KIKPVFVFDGGVP LKK
Sbjct: 27 LAIDISIWIHQVLQGYQDRFGNPKPNAHLIGLFHRICKLLYYKIKPVFVFDGGVPMLKKD 86
Query: 209 TISTLEKDRDQLLLERGKQTRLA--------STI---------TEQMSREAQELL----- 246
TI+ L + + + + +Q R ST+ E ++ E+ E++
Sbjct: 87 TIA-LRRKQKSMAKNKAQQMRTELINNLIKHSTVKTALNTEMQNESITNESSEIIISLQN 145
Query: 247 -----QLFGVPFIVAPGEAEAQC 264
+F +P I + +AE+ C
Sbjct: 146 KQTVDDMFKLPSIPSTSKAESSC 168
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 21/147 (14%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPPSVSREV--------- 51
A R+ KS A + A ++R++L+ NL++ + L + S E+
Sbjct: 89 ALRRKQKSMAKNKAQQMRTELINNLIKHSTVKTALNTEMQNESITNESSEIIISLQNKQT 148
Query: 52 --DMFELPPAP----AQTVQDEEEDSDSDD-----TEAKFRYADLHSVDINSEQFSALPP 100
DMF+LP P A++ ++ DSDS D + K+ ++H+VD+ S +F LP
Sbjct: 149 VDDMFKLPSIPSTSKAESSCNDVYDSDSSDELSPRKQTKW-IGNIHNVDVTSAEFKDLPA 207
Query: 101 DMRHEILTELLEQRKLSSWHKMHEMPQ 127
D+R+EILT+L E RK SSW ++HEMP+
Sbjct: 208 DVRYEILTDLKETRKQSSWGRLHEMPE 234
>gi|307176270|gb|EFN65901.1| DNA-repair protein complementing XP-G cells [Camponotus floridanus]
Length = 1193
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 75/102 (73%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
LE ++++L GK R A+ I++Q+ EAQELL+LFG+P+IVAP EAEAQCA LE
Sbjct: 797 LECEQEELTKGIGKFERQATNISDQIQTEAQELLRLFGIPYIVAPMEAEAQCAYLEQIEL 856
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
T G ITDDSDIWLFG + VYKNFF+ VL++ A DI+++F
Sbjct: 857 TNGTITDDSDIWLFGGQYVYKNFFNNNRRVLQFHAYDIQHHF 898
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 60/90 (66%), Gaps = 11/90 (12%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIW++Q+ +G D G PNAHL+GL+ RICKLL++KIKPVFVFDGGVP LKK
Sbjct: 27 LAIDISIWIYQVLQGYQDRHGTPKPNAHLLGLFTRICKLLYYKIKPVFVFDGGVPMLKKN 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQM 238
TI+ R KQ +A++ ++M
Sbjct: 87 TIAL-----------RRKQKSIATSKAQKM 105
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 87/152 (57%), Gaps = 23/152 (15%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNE-----------MALPPPSVSR 49
A R+ KS A S A K+++DL+ NL++ ++ L K+ M P + S+
Sbjct: 89 ALRRKQKSIATSKAQKMKADLINNLIKHSVVKTALNKDSKVDQTNGAIQAMLNMPTNCSK 148
Query: 50 EVDMFELPPAPAQT-----VQDEEEDSD-----SDDTEAKFRYADLHSVDINSEQFSALP 99
E DMF LP P+ + + D E+DSD S ++K+ ++H+VD+ S +F ALP
Sbjct: 149 E-DMFILPDMPSTSNMQTYISDNEDDSDTSVELSPRKQSKW-MGNIHNVDVTSNEFKALP 206
Query: 100 PDMRHEILTELLEQRKLSSWHKMHEMPQNDQH 131
D+R++ILT+L E RK +SW ++HE+PQ Q
Sbjct: 207 ADVRYDILTDLKETRKQNSWGRLHEIPQESQE 238
>gi|410912947|ref|XP_003969950.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Takifugu rubripes]
Length = 875
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 75/101 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S+L+ ++ L + +Q R+A+T+T QM E+QELLQLFGVPF+VAP EAEAQCA+L+
Sbjct: 447 SSLQAEQSSLRELKQQQERMANTVTGQMYLESQELLQLFGVPFLVAPMEAEAQCAALDRD 506
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
+HT G ITDDSD+WLFG R VYKNFF + +V + D++
Sbjct: 507 DHTHGTITDDSDVWLFGGRHVYKNFFSQNKYVEYFQYSDLQ 547
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G SV NAHL+ L+HRICKLLFF+IKPVFVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQAVKGVRDREGNSVQNAHLLTLFHRICKLLFFRIKPVFVFDGEAPLLKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQT 228
T++ L + R + + KQT
Sbjct: 87 TLA-LRRQRKEEMSRESKQT 105
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 24/191 (12%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPPSVS----REVD-MFE 55
A R+ K + + + + LL+ L++Q + LG ++ P PS+S EVD M+
Sbjct: 89 ALRRQRKEEMSRESKQTNEKLLRTFLKRQAIKAALG-DQSKEPIPSLSSVTRHEVDDMYV 147
Query: 56 LPPAPAQTVQDEEEDSDSD-------DTEAKFR---YADLHSVDINSEQFSALPPDMRHE 105
LP P ++E + D D + ++ Y + +SVDINSE+F++LPP+M+HE
Sbjct: 148 LPALPVAEEKNESSSGEEDKEWEEMVDNYSTYQGELYDNPNSVDINSEEFASLPPEMKHE 207
Query: 106 ILTELLEQRKLSSWHKMHEMPQNDQHSMLEFRCNIVINKLLVDLISDVSIWLHQLTKGTH 165
IL ++ E K M++ P + +++ ++ + L++ L ++ K
Sbjct: 208 ILKDMKEFSKRR--RTMYQKPPQNSGDFSQYQLTGLLQRNLLNQR------LGKVEKEMC 259
Query: 166 DLAGGSVPNAH 176
+ + GS P +
Sbjct: 260 ERSAGSAPQVY 270
>gi|345324376|ref|XP_001513433.2| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Ornithorhynchus anatinus]
Length = 1520
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 76/107 (71%), Gaps = 4/107 (3%)
Query: 208 QTISTLEKD----RDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQ 263
+ + TLEKD ++ L ++ +Q R+AST+T QM E+QELL+LFG+PFI AP EAEAQ
Sbjct: 1073 EELETLEKDLLVEQNTLQAQKQQQERIASTVTGQMFLESQELLRLFGIPFIEAPMEAEAQ 1132
Query: 264 CASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
CA L+L + T G ITDDSD+WLFGAR VYKNFF+K + Y D
Sbjct: 1133 CAILDLTDQTSGTITDDSDVWLFGARHVYKNFFNKNKFIEYYQYGDF 1179
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 53/69 (76%)
Query: 150 ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT 209
ISD+SIWL+Q KG D G ++ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQT
Sbjct: 287 ISDISIWLNQALKGVRDRHGNAIENAHLLTLFHRLCKLLFFRIRPIFVFDGETPILKKQT 346
Query: 210 ISTLEKDRD 218
++ + +D
Sbjct: 347 LAKRRQRKD 355
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 71/128 (55%), Gaps = 21/128 (16%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPPPSVSREV---DMFEL 56
A+R+ K AAS++ K LLK L++Q L L GK + ALP + D+F L
Sbjct: 348 AKRRQRKDLAASDSKKTTEKLLKTFLKRQALQTTLRGKRDEALPSITQVHRAKVDDIFIL 407
Query: 57 PPAPAQTVQDEEEDSDSDD-TEAKFR-----------YADLHSVDINSEQFSALPPDMRH 104
P ++Q+E+ SD +D E + R + + +++DI SE FS+LPP+++H
Sbjct: 408 P-----SLQEEKNSSDEEDEKEWQERMSQRQLLQEEFFHNPNAIDIESEDFSSLPPEIKH 462
Query: 105 EILTELLE 112
EILT++ E
Sbjct: 463 EILTDMKE 470
>gi|170036109|ref|XP_001845908.1| DNA-repair protein complementing XP-G cells [Culex
quinquefasciatus]
gi|167878599|gb|EDS41982.1| DNA-repair protein complementing XP-G cells [Culex
quinquefasciatus]
Length = 1217
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
Query: 204 QLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQ 263
+LKK +++ +++R +L E+ +Q RL +ITEQM ++ +LL+LFGVPFIVAP EAEAQ
Sbjct: 803 ELKKLSLNLAQQER-ELEKEKNRQARLGMSITEQMQQDCMDLLKLFGVPFIVAPMEAEAQ 861
Query: 264 CASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
CA L T G ITDDSDIWLFG +TVYKNFF+++ V+ +T I F
Sbjct: 862 CAFLNQIELTDGTITDDSDIWLFGGKTVYKNFFNQQKLVMEFTIEGIERAF 912
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+TKG D G ++PNAH++GL+HR+CKL++++I+PVFVFDGGVP LK+Q
Sbjct: 27 LAVDISIWLHQVTKGFQDSKGSALPNAHVLGLFHRLCKLMYYRIRPVFVFDGGVPALKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSRE 241
TI+ + + + + RL + E +++E
Sbjct: 87 TIAKRNQSKSKF---HNEADRLQQLLLETLAKE 116
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 81/145 (55%), Gaps = 19/145 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPPS-----VSREV---- 51
A+R KSK + AD+++ LL+ L +++++ LG L PS S+E
Sbjct: 89 AKRNQSKSKFHNEADRLQQLLLETLAKEKVVQQALGSATSLLVSPSKKPGNSSKEQGEPD 148
Query: 52 DMFELPP---------APAQTVQDEEEDSDSDDTEAK-FRYADLHSVDINSEQFSALPPD 101
+MF+LPP A + +E +S D+ +K F + +L+++D+ S F LP D
Sbjct: 149 EMFKLPPLKEDSPFKNADSSATDLDESNSSWDEKGSKNFYHLNLNAIDVTSVHFKNLPAD 208
Query: 102 MRHEILTELLEQRKLSSWHKMHEMP 126
+RH+IL+++ E RK SSW ++HE+P
Sbjct: 209 VRHDILSDIKETRKQSSWGRLHELP 233
>gi|47230549|emb|CAF99742.1| unnamed protein product [Tetraodon nigroviridis]
Length = 866
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 76/101 (75%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S+L+ +++ L + +Q R+AST+T QM E+QELL+LFGVPF++AP EAEAQCA+L+
Sbjct: 646 SSLQAEQNSLKELQQQQERMASTVTGQMYLESQELLRLFGVPFLIAPMEAEAQCAALDRA 705
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
+HT G ITDDSD+WLFG R VYKNFF + +V + D++
Sbjct: 706 DHTHGTITDDSDVWLFGGRHVYKNFFSQNKYVEYFQYSDLQ 746
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G SV NAHL+ L+HRICKLLFF+I+PVFVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQAVKGVRDREGNSVQNAHLLTLFHRICKLLFFRIRPVFVFDGEAPLLKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQT 228
T++ L + R + L KQT
Sbjct: 87 TLA-LRRQRKEELSRESKQT 105
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 18/141 (12%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPPSVS----REVD-MFE 55
A R+ K + + + + LL+ L++Q L LG ++ P PS+S EVD M+
Sbjct: 89 ALRRQRKEELSRESKQTNEKLLRTFLKRQALKAALG-DQSKEPIPSLSSVTRHEVDDMYV 147
Query: 56 LPPAPAQTVQDEEEDSDS----DDTEAKFR------YADLHSVDINSEQFSALPPDMRHE 105
LP PA ++E + D+ +R Y + +SVDINSE+F+ALPP+M+HE
Sbjct: 148 LPALPAADEKNESSSEEEDKEWDEMVDNYRTCQGELYEEPNSVDINSEEFAALPPEMKHE 207
Query: 106 ILTELLE--QRKLSSWHKMHE 124
IL ++ E +R+ + + K E
Sbjct: 208 ILKDMKEFSKRRRTMYQKPPE 228
>gi|350417449|ref|XP_003491427.1| PREDICTED: DNA repair protein complementing XP-G cells-like [Bombus
impatiens]
Length = 1107
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 72/104 (69%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ LE + +L+ GK R I++Q+ EAQELL+LFG+P+I+AP EAEAQCA LE
Sbjct: 711 TQLEDKQTELMANIGKLERQGIDISDQIQIEAQELLRLFGIPYIIAPMEAEAQCAYLEQI 770
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
+ G ITDDSDIWLFG + VYKNFFD VL + + DI++YF
Sbjct: 771 HLIDGTITDDSDIWLFGGQCVYKNFFDNNKKVLEFRSCDIQHYF 814
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 60/93 (64%), Gaps = 11/93 (11%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIW+HQ+ +G D G PNAHLIGL+HRICKLL++KIKPVFVFDGGVP LKK
Sbjct: 27 LAIDISIWIHQVLQGYQDRFGNPKPNAHLIGLFHRICKLLYYKIKPVFVFDGGVPMLKKN 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSRE 241
TI+ R KQ +A +QM E
Sbjct: 87 TIAL-----------RRKQKSMAKNKAQQMRTE 108
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 19/145 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL---------GKNEMALPPPSVSREV 51
A R+ KS A + A ++R++L+ NL++ + VL G +E+ + +
Sbjct: 89 ALRRKQKSMAKNKAQQMRTELINNLIKHSTIKAVLNTEKQVTTNGSSEVVINLQNKQTVN 148
Query: 52 DMFELPPAPAQTVQDEEEDSD---------SDDTEAKFRYADLHSVDINSEQFSALPPDM 102
DM++LP P+ + + D S + K+ ++HSVD+ S +F LP D+
Sbjct: 149 DMYKLPNMPSTSKAESSHSDDCNSDSSDEPSPKKQTKWS-GNIHSVDVTSAEFKTLPADV 207
Query: 103 RHEILTELLEQRKLSSWHKMHEMPQ 127
R+EILT+L E RK SSW ++HEMP+
Sbjct: 208 RYEILTDLKETRKQSSWGRLHEMPE 232
>gi|432852332|ref|XP_004067195.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Oryzias latipes]
Length = 1078
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 75/101 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
++L+ ++ L ++ +Q R+A+T+T QM E+QELL+LFGVPF+VAP EAEAQCA+L+
Sbjct: 662 NSLQMEQSNLKDQKQQQERMANTVTGQMYLESQELLRLFGVPFLVAPMEAEAQCAALDRA 721
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
+ T G ITDDSD+WLFG R VYKNFF + +V Y D++
Sbjct: 722 DQTHGTITDDSDVWLFGGRHVYKNFFSQNKYVEHYQYSDLQ 762
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G SV NAHL+ L+HRICKLLFF+I+PVFVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQAVKGVRDREGNSVQNAHLLTLFHRICKLLFFRIRPVFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQT 228
T++ + +++L E KQT
Sbjct: 87 TLAQRRQRKEELTRE-SKQT 105
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 17/140 (12%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPPSVSR----EVDMFEL 56
AQR+ K + + + LLK L++Q + LG + P PS+S EVD +
Sbjct: 89 AQRRQRKEELTRESKQTNEKLLKTFLKRQAIKAALGDHSKD-PLPSLSSVRRDEVDDLYV 147
Query: 57 PPA--PAQTVQDEEEDSDSD--------DTEAKFRYADLHSVDINSEQFSALPPDMRHEI 106
PA PA+ V+ S S D+ ++ D +SVDINSE+F++LP +MRHE+
Sbjct: 148 LPAVPPAEDVEKNRSPSPSSEEESQEEADSFHAYQEEDPNSVDINSEEFASLPAEMRHEM 207
Query: 107 LTELLE--QRKLSSWHKMHE 124
L E+ E +R+ + +HK E
Sbjct: 208 LKEMREFSKRRRTMFHKPPE 227
>gi|332029719|gb|EGI69598.1| DNA repair protein complementing XP-G cells-like protein
[Acromyrmex echinatior]
Length = 417
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 73/98 (74%)
Query: 217 RDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGV 276
+++L + GK R A+ I+EQ+ +AQ+LL+LFG+P+I+AP EAEAQCA LE T G
Sbjct: 19 QEELARDIGKFERQATNISEQIKTDAQDLLRLFGIPYIIAPMEAEAQCAYLEQIKLTDGT 78
Query: 277 ITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
ITDDSDIWLFG + VYKNFF+ +LR+ A DI+++F
Sbjct: 79 ITDDSDIWLFGGQCVYKNFFNHNKRMLRFRACDIQHHF 116
>gi|355754793|gb|EHH58694.1| hypothetical protein EGM_08605, partial [Macaca fascicularis]
Length = 1000
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L E+ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 744 SNLLAQQNSLKAEKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 803
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 804 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 838
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ NAHL+ L+HR+CKLLFF+I+PVFVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDHHGNSIENAHLLTLFHRLCKLLFFRIRPVFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ + +D
Sbjct: 87 TLAKRRQRKD 96
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 17/140 (12%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLG--KNEMALPPPS---VSREVDMFE 55
A+R+ K A+S++ K LLK L++Q + + E PS V RE DM+
Sbjct: 89 AKRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFKSKRQEENYTLPSLTQVRRENDMYV 148
Query: 56 LPPAPAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEI 106
LPP + EE+ + + +F + + ++DI SE FS+LPP+++HEI
Sbjct: 149 LPPLQEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEI 207
Query: 107 LTELLE--QRKLSSWHKMHE 124
LT++ E +R+ + + M E
Sbjct: 208 LTDMKEFTKRRRTLFEAMPE 227
>gi|405975699|gb|EKC40248.1| DNA repair protein complementing XP-G cells-like protein
[Crassostrea gigas]
Length = 1005
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 69/90 (76%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
LE + L ERG+Q RLA+++++QM EAQ+LL+LFGVPF+++P EAEAQCA L+ N
Sbjct: 612 LELETRALQQERGRQERLATSLSDQMYLEAQDLLKLFGVPFVLSPTEAEAQCAWLDSANL 671
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHV 302
T G ITDDSDIWLFG R VYKNFF++ V
Sbjct: 672 TNGTITDDSDIWLFGGRRVYKNFFNQDRTV 701
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 49/64 (76%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L DVSIWLHQ KG + G + NAHL L+ R+CKLL++KIKPVFVFDG VP+LKKQ
Sbjct: 27 LAVDVSIWLHQAVKGMRNKDGSPISNAHLHVLFTRVCKLLYYKIKPVFVFDGRVPELKKQ 86
Query: 209 TIST 212
T+++
Sbjct: 87 TMAS 90
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 19/146 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALP-------------PPSV 47
A R+ K A DK +L NLL+ L +V+ K +
Sbjct: 89 ASRREKKMIAEVEGDKASKKILDNLLKSHALKEVMKKGHASTDSSSSVSQPSTSSHSQQS 148
Query: 48 SREVDMFELPPAP-----AQTVQDEEEDSDSDDTEAKFRYADLHSVDINSEQFSALPPDM 102
+++ D+F+LPP P AQ +Q EE + ++ T + Y +L VDI+S +F +LP ++
Sbjct: 149 AQKPDLFQLPPLPEEFARAQEIQPWEEPT-TNATIFEDEYQNLDDVDIDSAEFKSLPAEV 207
Query: 103 RHEILTELLEQRKLSSWHKMHEMPQN 128
+HEIL+EL E+RK + + ++P++
Sbjct: 208 QHEILSELKERRKRLTRYSNLKLPKD 233
>gi|302845188|ref|XP_002954133.1| hypothetical protein VOLCADRAFT_82613 [Volvox carteri f.
nagariensis]
gi|300260632|gb|EFJ44850.1| hypothetical protein VOLCADRAFT_82613 [Volvox carteri f.
nagariensis]
Length = 254
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 89/161 (55%), Gaps = 15/161 (9%)
Query: 162 KGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT-----------I 210
K D G + NAHL+G + RIC+LLF +++PVFVFDG P LK+ T
Sbjct: 2 KAMRDEKGDMMRNAHLLGFFRRICRLLFHRVRPVFVFDGATPALKRHTNIARRRRREAQQ 61
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLF-GVPFIVAPGEAEAQCASLEL 269
L K ++LL+ + K+ R + + L F GVP + P AEAQCA LE+
Sbjct: 62 GVLRKTAEKLLIAQLKKQR---NVGMPLKLNVAIPLAAFKGVPTVSEPAAAEAQCAFLEV 118
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
GV+TDD+D++LFGAR VY++ F+ K +V Y D+
Sbjct: 119 SGLVDGVVTDDNDVFLFGARHVYRHIFENKKYVEEYQMSDV 159
>gi|297274789|ref|XP_002800868.1| PREDICTED: DNA repair protein complementing XP-G cells isoform 2
[Macaca mulatta]
Length = 1040
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L E+ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 599 SNLLAQQNSLKAEKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 658
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 659 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 693
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 82 YADLHSVDINSEQFSALPPDMRHEILTELLE--QRKLSSWHKMHE 124
+ + ++DI SE FS+LPP+++HEILT++ E +R+ + + M E
Sbjct: 38 FHNPQAIDIESEDFSSLPPEVKHEILTDMKEFTKRRRTLFEAMPE 82
>gi|74211217|dbj|BAE37682.1| unnamed protein product [Mus musculus]
Length = 1043
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 72/95 (75%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L +++ L ++ +Q R+A+++T QM +E+QELL+LFGVP+I AP EAEAQCA L+L
Sbjct: 740 SNLLAEQNSLKAQKQQQDRIAASVTGQMFQESQELLRLFGVPYIQAPMEAEAQCAMLDLT 799
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 800 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 834
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G + NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDSHGNVIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQT 228
T++ + +D ++ K T
Sbjct: 87 TLAKRRQRKDSASIDSRKTT 106
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 12/136 (8%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPP--SVSREVDMFELPP 58
A+R+ K A+ ++ K LLK L++Q L + PP V R+ D++ LPP
Sbjct: 89 AKRRQRKDSASIDSRKTTEKLLKTFLKRQALKTAFRSSRHEAPPSLTQVQRQDDIYVLPP 148
Query: 59 APAQTVQDEEEDS--------DSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
P + EE+ D + + + ++DI SE FS+LPP+++HEILT++
Sbjct: 149 LPEEEKHSSEEEDEKQWQARMDQKQALQEEFFHNPQAIDIESEDFSSLPPEVKHEILTDM 208
Query: 111 LE--QRKLSSWHKMHE 124
E +R+ + + M E
Sbjct: 209 KEFTKRRRTLFEAMPE 224
>gi|355701088|gb|EHH29109.1| hypothetical protein EGK_09444 [Macaca mulatta]
Length = 1194
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L E+ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 744 SNLLAQQNSLKAEKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 803
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 804 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 838
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ NAHL+ L+HR+CKLLFF+I+PVFVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDHHGNSIENAHLLTLFHRLCKLLFFRIRPVFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ + +D
Sbjct: 87 TLAKRRQRKD 96
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 17/140 (12%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLG--KNEMALPPPS---VSREVDMFE 55
A+R+ K A+S++ K LLK L++Q + + E PS V RE DM+
Sbjct: 89 AKRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFKSKRQEENYTLPSLTQVRRENDMYV 148
Query: 56 LPPAPAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEI 106
LPP + EE+ + + +F + + ++DI SE FS+LPP+++HEI
Sbjct: 149 LPPLQEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEI 207
Query: 107 LTELLE--QRKLSSWHKMHE 124
LT++ E +R+ + + M E
Sbjct: 208 LTDMKEFTKRRRTLFEAMPE 227
>gi|351703064|gb|EHB05983.1| DNA repair protein complementing XP-G cells [Heterocephalus glaber]
Length = 1026
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 74/102 (72%), Gaps = 4/102 (3%)
Query: 208 QTISTLEKD----RDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQ 263
+ + TLE D ++ L ++ +Q R+AST+T QM E+QELL+LFGVP+I AP EAEAQ
Sbjct: 569 EELETLESDLLAQQNSLHAQKQQQERVASTVTGQMFLESQELLRLFGVPYIQAPMEAEAQ 628
Query: 264 CASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
CA L+L + T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 629 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKDKFVEYY 670
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ + +D
Sbjct: 87 TLAKRRQRKD 96
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLG--KNEMALPPPSVSREVDMFELPP 58
A+R+ K A++++ K LL+ L++Q + L + ALP + R D++ LPP
Sbjct: 89 AKRRQRKDLASNDSRKTTEKLLQTFLKRQAIKSALKSKRQNEALPSLTEVRREDIYALPP 148
Query: 59 APAQTVQDEEEDS--------DSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
Q EE+ D + + + ++DI SE FS+LPP+++HEILT++
Sbjct: 149 LQEQEKHSSEEEEEKEWQERMDQKQALQEEFFHNPQAIDIESEDFSSLPPEVKHEILTDM 208
Query: 111 LE 112
E
Sbjct: 209 KE 210
>gi|158299596|ref|XP_319693.4| AGAP008939-PA [Anopheles gambiae str. PEST]
gi|157013593|gb|EAA14799.5| AGAP008939-PA [Anopheles gambiae str. PEST]
Length = 1256
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 65/89 (73%)
Query: 226 KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWL 285
KQ+R+ +ITEQM R+ ELLQ+FGVPFIVAP EAEAQCA L + T G ITDDSDIWL
Sbjct: 878 KQSRIGLSITEQMRRDCMELLQIFGVPFIVAPMEAEAQCAFLNQLDMTDGTITDDSDIWL 937
Query: 286 FGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
FG + VYKNFF+++ VL +T I F
Sbjct: 938 FGGKKVYKNFFNQQKLVLEFTIEGIEQMF 966
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 67/98 (68%), Gaps = 10/98 (10%)
Query: 136 FRCNIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPV 195
F C + L V +D+SIWLHQ+ KG D G ++PNAH++GL+HR+CKL++++IKP+
Sbjct: 36 FVCGVETKALTVSFWADISIWLHQVVKGFQDSKGSALPNAHVLGLFHRLCKLMYYRIKPI 95
Query: 196 FVFDGGVPQLKKQTISTLEKDRD----------QLLLE 223
FVFDGG P LKKQTI+ ++ ++ QLLLE
Sbjct: 96 FVFDGGAPLLKKQTIAKRQQSKNNYQNEADRIQQLLLE 133
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 87/158 (55%), Gaps = 21/158 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLG----------KNEMALPPPSVSRE 50
A+R+ K+ + AD+++ LL+ L +++++ LG K + PS S++
Sbjct: 111 AKRQQSKNNYQNEADRIQQLLLETLAKEKVVQQALGSATNILISPSKKAITNGGPSTSKQ 170
Query: 51 VD-------MFELPP--APAQTVQDEEEDSDSDDTEAKFRY-ADLHSVDINSEQFSALPP 100
D MF+LPP AP + + + DS D+ ++ Y +L+++D+ S F LP
Sbjct: 171 PDREEEPDAMFKLPPLKAPEEPIDLDRSDSSMDEKASRHYYHLNLNAIDVTSVYFKNLPA 230
Query: 101 DMRHEILTELLEQRKLSSWHKMHEMP-QNDQHSMLEFR 137
D+RHEIL ++ E RK SSW ++HE+P Q+D S + +
Sbjct: 231 DVRHEILNDIKETRKQSSWGRLHELPVQSDSFSSFQMK 268
>gi|380810474|gb|AFE77112.1| DNA repair protein complementing XP-G cells [Macaca mulatta]
gi|383416485|gb|AFH31456.1| DNA repair protein complementing XP-G cells [Macaca mulatta]
Length = 1182
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L E+ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 741 SNLLAQQNSLKAEKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 800
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 801 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 835
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ NAHL+ L+HR+CKLLFF+I+PVFVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDHHGNSIENAHLLTLFHRLCKLLFFRIRPVFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ + +D
Sbjct: 87 TLAKRRQRKD 96
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPP 58
A+R+ K A+S++ K LLK L++Q + K + ALP V RE DM+ LPP
Sbjct: 89 AKRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFKSKRDEALPSLTQVRRENDMYVLPP 148
Query: 59 APAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTE 109
+ EE+ + + +F + + ++DI SE FS+LPP+++HEILT+
Sbjct: 149 LQEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTD 207
Query: 110 LLE--QRKLSSWHKMHE 124
+ E +R+ + + M E
Sbjct: 208 MKEFTKRRRTLFEAMPE 224
>gi|297274787|ref|XP_001096257.2| PREDICTED: DNA repair protein complementing XP-G cells isoform 1
[Macaca mulatta]
Length = 1182
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L E+ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 741 SNLLAQQNSLKAEKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 800
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 801 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 835
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ NAHL+ L+HR+CKLLFF+I+PVFVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDHHGNSIENAHLLTLFHRLCKLLFFRIRPVFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ + +D
Sbjct: 87 TLAKRRQRKD 96
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPP 58
A+R+ K A+S++ K LLK L++Q + K + ALP V RE DM+ LPP
Sbjct: 89 AKRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFKSKRDEALPSLTQVRRENDMYVLPP 148
Query: 59 APAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTE 109
+ EE+ + + +F + + ++DI SE FS+LPP+++HEILT+
Sbjct: 149 LQEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTD 207
Query: 110 LLE--QRKLSSWHKMHE 124
+ E +R+ + + M E
Sbjct: 208 MKEFTKRRRTLFEAMPE 224
>gi|312377995|gb|EFR24684.1| hypothetical protein AND_10542 [Anopheles darlingi]
Length = 1428
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 73/116 (62%)
Query: 199 DGGVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPG 258
D P KQ L ++ +L E+ KQ RL +IT+QM + ELLQLFGVP+IVAP
Sbjct: 883 DSRTPLELKQMALDLAQNERELEREKNKQNRLGVSITDQMRNDCMELLQLFGVPYIVAPM 942
Query: 259 EAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
EAEAQCA L T G ITDDSDIWLFG + VYKNFF+++ VL +T I F
Sbjct: 943 EAEAQCAFLNQIELTDGTITDDSDIWLFGGQKVYKNFFNQQKLVLEFTIEGIEQAF 998
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 62/85 (72%), Gaps = 10/85 (11%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L DVSIWLHQ+ KG D G ++PNAH++GL+HR+CKL+F++IKP+FVFDGGVP LKKQ
Sbjct: 27 LAVDVSIWLHQVIKGFQDSKGSALPNAHVLGLFHRLCKLMFYRIKPIFVFDGGVPVLKKQ 86
Query: 209 TISTLEKDRD----------QLLLE 223
TI+ + R+ QLLLE
Sbjct: 87 TIAKRNQSRNNYQNEADRIQQLLLE 111
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 85/156 (54%), Gaps = 20/156 (12%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMAL------PPPSVS------ 48
A+R ++ + AD+++ LL+ L +++++ LG L P P++
Sbjct: 89 AKRNQSRNNYQNEADRIQQLLLETLAKEKVVQQALGSATNILITPSKKPLPAIGGSGSKQ 148
Query: 49 ---REVD-MFELPPA--PAQTVQDEEEDSDSDDTEAK-FRYADLHSVDINSEQFSALPPD 101
E D MF+LPP P + + ++ DS D+ ++ + + +L+++D+ S F LP D
Sbjct: 149 QQEEEPDAMFKLPPMKLPEEPIDLDKSDSSMDEKASRNYYHLNLNAIDVTSVYFKNLPAD 208
Query: 102 MRHEILTELLEQRKLSSWHKMHEMP-QNDQHSMLEF 136
+RHEIL ++ E RK SSW ++HE+P Q+D S +
Sbjct: 209 VRHEILNDIKETRKQSSWGRLHELPVQSDSFSSFQM 244
>gi|432119340|gb|ELK38422.1| DNA repair protein complementing XP-G cells [Myotis davidii]
Length = 1164
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L +++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 749 SNLLTEQNSLKAQKQQQERVAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLT 808
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 809 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 843
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G ++ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNAIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ + +D
Sbjct: 87 TLAKRRQKKD 96
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 75/137 (54%), Gaps = 14/137 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPP 58
A+R+ K A S++ K LLK L++Q + L K + ALP V RE D++ LPP
Sbjct: 89 AKRRQKKDLATSDSKKTTEKLLKTFLKRQAIKTALRSKRDEALPSLTQVKREDDIYALPP 148
Query: 59 APAQTVQDEEEDSDSDDT---------EAKFRYADLHSVDINSEQFSALPPDMRHEILTE 109
+ EE+ + + + +F + + H+VDI SE FS+LPP+++HEILT+
Sbjct: 149 LQEEEKNSSEEEDEKEWQERMNQKQALQEEF-FQNPHAVDIESEDFSSLPPEIKHEILTD 207
Query: 110 LLE--QRKLSSWHKMHE 124
+ E +R+ + + M E
Sbjct: 208 MKEFTKRRRTLFEAMPE 224
>gi|402902426|ref|XP_003914105.1| PREDICTED: DNA repair protein complementing XP-G cells [Papio anubis]
Length = 1814
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L E+ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 1373 SNLLAQQNSLKAEKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 1432
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 1433 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 1467
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 53/69 (76%)
Query: 150 ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT 209
+S++SIWL+Q KG D G S+ NAHL+ L+HR+CKLLFF+I+PVFVFDG P LKKQT
Sbjct: 660 MSNISIWLNQALKGVRDHHGNSIENAHLLTLFHRLCKLLFFRIRPVFVFDGDAPLLKKQT 719
Query: 210 ISTLEKDRD 218
++ + +D
Sbjct: 720 LAKRRQRKD 728
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 12/123 (9%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPP 58
A+R+ K A+S++ K LLK L++Q + K + ALP V RE DM+ LPP
Sbjct: 721 AKRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFKSKRDEALPSLTQVRRENDMYVLPP 780
Query: 59 APAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTE 109
+ EE+ + + +F + + ++DI SE FS+LPP+++HEILT+
Sbjct: 781 LQEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTD 839
Query: 110 LLE 112
+ E
Sbjct: 840 MKE 842
>gi|417406083|gb|JAA49718.1| Putative 5'-3' exonuclease [Desmodus rotundus]
Length = 1189
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 72/100 (72%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L +++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 748 SNLLTEQNSLKAKKQQQERIAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLT 807
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
+ T G ITDDSDIWLFGAR VYKNFF+K V Y D
Sbjct: 808 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDF 847
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENAHLLTLFHRLCKLLFFRIRPIFVFDGDTPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ +D
Sbjct: 87 TLAKRRHKKD 96
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 74/137 (54%), Gaps = 14/137 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPP 58
A+R+ K A +++ K LLK L++Q + L K + ALP V RE D++ LPP
Sbjct: 89 AKRRHKKDLATNDSRKTTEKLLKTFLKRQAIKTALRSKRDEALPSLTQVQREDDIYALPP 148
Query: 59 APAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTE 109
+ EE+ + + + +F + + H+VDI SE F +LPP+++HEILT+
Sbjct: 149 LQEEEKNSSEEEDEKEWQERMNQKQELQEEF-FQNPHAVDIESEDFRSLPPEIKHEILTD 207
Query: 110 LLE--QRKLSSWHKMHE 124
+ E +R+ + + M E
Sbjct: 208 MKEFTKRRRTLFEAMPE 224
>gi|1209080|gb|AAA91039.1| XPG [Mus musculus]
gi|1209097|gb|AAB17885.1| XPG [Mus musculus]
Length = 1170
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L +++ L ++ +Q R+A+++T QM E+QELL+LFGVP+I AP EAEAQCA L+L
Sbjct: 740 SNLLAEQNSLKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLS 799
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 800 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 834
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G + NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDSHGNVIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQT 228
T++ + +D ++ K T
Sbjct: 87 TLAKRRQRKDSASIDSRKTT 106
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 14/137 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPP--SVSREVDMFELPP 58
A+R+ K A+ ++ K LLK L++Q L + PP V R+ D++ LPP
Sbjct: 89 AKRRQRKDSASIDSRKTTEKLLKTFLKRQALKTAFRSSRHEAPPSLTQVQRQDDIYVLPP 148
Query: 59 APAQTVQD------EEEDSDSDDTEA---KFRYADLHSVDINSEQFSALPPDMRHEILTE 109
P + ++ + D +A +F + + ++DI SE FS+LPP+++HEILT+
Sbjct: 149 LPEEEKHSSEEEDEKQWQARMDQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTD 207
Query: 110 LLE--QRKLSSWHKMHE 124
+ E +R+ + + M E
Sbjct: 208 MKEFTKRRRTLFEAMPE 224
>gi|1389577|dbj|BAA03813.1| ERCC5 [Mus musculus]
Length = 1170
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L +++ L ++ +Q R+A+++T QM E+QELL+LFGVP+I AP EAEAQCA L+L
Sbjct: 740 SNLLAEQNSLKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLS 799
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 800 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 834
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G + NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDSHGNVIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQT 228
T++ + +D ++ K T
Sbjct: 87 TLAKRRQRKDSASIDSRKTT 106
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 14/137 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPP--SVSREVDMFELPP 58
A+R+ K A+ ++ K LLK L++Q L + PP V R+ D++ LPP
Sbjct: 89 AKRRQRKDSASIDSRKTTEKLLKTFLKRQALKTAFRSSRHEAPPSLTQVQRQDDIYVLPP 148
Query: 59 APAQTVQD------EEEDSDSDDTEA---KFRYADLHSVDINSEQFSALPPDMRHEILTE 109
P + ++ + D +A +F + + ++DI SE FS+LPP+++HEILT+
Sbjct: 149 LPEEEKHSSEEEDEKQWQARMDQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTD 207
Query: 110 LLE--QRKLSSWHKMHE 124
+ E +R+ + + M E
Sbjct: 208 MKEFTKRRRTLFEAMPE 224
>gi|355686469|gb|AER98068.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Mustela putorius furo]
Length = 1003
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S+L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 560 SSLLTQQNSLEAQKQQQERIAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLT 619
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 620 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 654
>gi|291393208|ref|XP_002713065.1| PREDICTED: XPG-complementing protein isoform 2 [Oryctolagus
cuniculus]
Length = 1203
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 74/102 (72%), Gaps = 4/102 (3%)
Query: 208 QTISTLEKD----RDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQ 263
+ + TLE D ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P++ AP EAEAQ
Sbjct: 745 EELETLENDLLAQQNSLKAQKQQQERVAATVTGQMFLESQELLRLFGIPYVEAPMEAEAQ 804
Query: 264 CASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
CA L+L + T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 805 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 846
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ + +D
Sbjct: 87 TLAKRRQRKD 96
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPP 58
A+R+ K A++++ K LLK L++Q L K ALP V RE D++ LPP
Sbjct: 89 AKRRQRKDLASTDSRKTTEKLLKTFLKRQALKTAFKSKRNEALPSLTQVQREDDIYVLPP 148
Query: 59 APAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTE 109
+ EE+ S + +F + + H++DI SE FS+LPP+++HEILT+
Sbjct: 149 LKEEEKHSSEEEDEKEWQERMSQKQALQEEF-FHNPHAIDIESEDFSSLPPEVKHEILTD 207
Query: 110 LLE--QRKLSSWHKMHE 124
+ E +R+ + + M E
Sbjct: 208 MKEFTKRRRTLFEAMPE 224
>gi|291393206|ref|XP_002713064.1| PREDICTED: XPG-complementing protein isoform 1 [Oryctolagus
cuniculus]
Length = 1188
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 74/102 (72%), Gaps = 4/102 (3%)
Query: 208 QTISTLEKD----RDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQ 263
+ + TLE D ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P++ AP EAEAQ
Sbjct: 730 EELETLENDLLAQQNSLKAQKQQQERVAATVTGQMFLESQELLRLFGIPYVEAPMEAEAQ 789
Query: 264 CASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
CA L+L + T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 790 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 831
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ + +D
Sbjct: 87 TLAKRRQRKD 96
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPP 58
A+R+ K A++++ K LLK L++Q L K ALP V RE D++ LPP
Sbjct: 89 AKRRQRKDLASTDSRKTTEKLLKTFLKRQALKTAFKSKRNEALPSLTQVQREDDIYVLPP 148
Query: 59 APAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTE 109
+ EE+ S + +F + + H++DI SE FS+LPP+++HEILT+
Sbjct: 149 LKEEEKHSSEEEDEKEWQERMSQKQALQEEF-FHNPHAIDIESEDFSSLPPEVKHEILTD 207
Query: 110 LLE--QRKLSSWHKMHE 124
+ E +R+ + + M E
Sbjct: 208 MKEFTKRRRTLFEAMPE 224
>gi|403272924|ref|XP_003928284.1| PREDICTED: DNA repair protein complementing XP-G cells [Saimiri
boliviensis boliviensis]
Length = 1638
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L + ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 1194 SNLLEQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 1253
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 1254 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 1288
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 53/69 (76%)
Query: 150 ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT 209
+S++SIWL+Q KG D G S+ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQT
Sbjct: 482 MSNISIWLNQALKGVRDRHGNSIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQT 541
Query: 210 ISTLEKDRD 218
++ + +D
Sbjct: 542 LAKRRQRKD 550
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 12/123 (9%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPP 58
A+R+ K A+S++ K LLK L++Q + K + ALP V RE D++ LPP
Sbjct: 543 AKRRQRKDSASSDSRKTTEKLLKTFLKRQAIKTAFKSKRDEALPSLTQVRRENDIYVLPP 602
Query: 59 APAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTE 109
+ EE+ + + +F + + ++DI SE FS+LPP+++HEILT+
Sbjct: 603 LQEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTD 661
Query: 110 LLE 112
+ E
Sbjct: 662 MKE 664
>gi|344284659|ref|XP_003414082.1| PREDICTED: DNA repair protein complementing XP-G cells-like
[Loxodonta africana]
Length = 1636
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S+L + ++ L ++ +Q R A+T+T QM E+QELL+LFGVP+I AP EAEAQCA L+L
Sbjct: 1194 SSLLEQQNSLKAQKQQQERAAATVTGQMFLESQELLRLFGVPYIEAPMEAEAQCAILDLT 1253
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 1254 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 1288
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 53/70 (75%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D GGS+ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 460 LAVDISIWLNQALKGVRDHLGGSIENAHLLILFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 519
Query: 209 TISTLEKDRD 218
T++ + +D
Sbjct: 520 TLAKRRQRKD 529
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 16/138 (11%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPPS---VSREVDMFELP 57
A+R+ K A S++ K LLK L++Q + L +++ P PS V RE D++ LP
Sbjct: 522 AKRRQRKDLANSDSRKTTEKLLKTFLKRQAIKTAL-RSKRDEPLPSLTQVRREDDIYVLP 580
Query: 58 PAPAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILT 108
P + EE+ + + +F + + ++DI SE FS+LPP+++HEILT
Sbjct: 581 PLQEKEKNSSEEEDEKEWQERMTQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILT 639
Query: 109 ELLE--QRKLSSWHKMHE 124
++ E +R+ + + KM E
Sbjct: 640 DMKEFTKRRRTLFEKMPE 657
>gi|74141263|dbj|BAE35937.1| unnamed protein product [Mus musculus]
Length = 898
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L +++ L ++ +Q R+A+++T QM E+QELL+LFGVP+I AP EAEAQCA L+L
Sbjct: 637 SNLLAEQNSLKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLT 696
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 697 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 731
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 12/121 (9%)
Query: 16 KVRSDLLKNLLEQQLLNDVLGKNEMALPPP--SVSREVDMFELPPAPAQTVQDEEEDS-- 71
K LLK L++Q L + PP V R+ D++ LPP P + EE+
Sbjct: 1 KTTEKLLKTFLKRQALKTAFRSSRHEAPPSLTQVQRQDDIYVLPPLPEEEKHSSEEEDEK 60
Query: 72 ------DSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTELLE--QRKLSSWHKMH 123
D + + + ++DI SE FS+LPP+++HEILT++ E +R+ + + M
Sbjct: 61 QWQARMDQKQALQEEFFHNPQAIDIESEDFSSLPPEVKHEILTDMKEFTKRRRTLFEAMP 120
Query: 124 E 124
E
Sbjct: 121 E 121
>gi|383863581|ref|XP_003707258.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Megachile rotundata]
Length = 1072
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 72/102 (70%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
LE ++ +L+ GK R I++++ EAQELL+LFG+P+IVAP EAEAQCA LE +
Sbjct: 676 LEDEQTELMANIGKLERQGIDISDRIRTEAQELLRLFGIPYIVAPMEAEAQCAYLEQIHL 735
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
T G ITDDSDIWLFG + VYKNFF+ VL++ DI ++F
Sbjct: 736 TDGTITDDSDIWLFGGQCVYKNFFNNNKKVLQFCLGDIEHHF 777
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 73/122 (59%), Gaps = 12/122 (9%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIW+HQ+ +G D G PNAHLIGL++RICKLL+++IKPVFVFDGGVP LKK
Sbjct: 27 LAIDISIWIHQVLQGYQDRFGNPKPNAHLIGLFYRICKLLYYRIKPVFVFDGGVPMLKKN 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSRE-AQELLQLFGVPFIVAPGEAEAQCASL 267
TI+ R KQ +A +QM E L++ V ++ P + ++ + +
Sbjct: 87 TIAL-----------RRKQKSMAKNKAQQMRTELINNLIKHSAVKTVLNPEKQDSGSSEI 135
Query: 268 EL 269
L
Sbjct: 136 IL 137
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 90/163 (55%), Gaps = 18/163 (11%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-------GKNEMALPPPSVSREVDM 53
A R+ KS A + A ++R++L+ NL++ + VL G +E+ L P+ E D+
Sbjct: 89 ALRRKQKSMAKNKAQQMRTELINNLIKHSAVKTVLNPEKQDSGSSEIILSLPNQDPEDDI 148
Query: 54 FELPPAPAQTVQDEEEDSD---------SDDTEAKFRYADLHSVDINSEQFSALPPDMRH 104
F+LP P+ + D S + K+ ++H+VD++S +F ALP DMR+
Sbjct: 149 FKLPDEPSTSKTQLSLSDDYDSDSSVELSPRKQTKW-IGNIHNVDVSSAEFKALPADMRY 207
Query: 105 EILTELLEQRKLSSWHKMHEMPQNDQHSMLEFRCNIVINKLLV 147
EILT+L E RK +SW ++HEMP+ + H F+ ++ + LV
Sbjct: 208 EILTDLKETRKQNSWGRLHEMPE-ESHEFSGFQMKRLLKRRLV 249
>gi|74141150|dbj|BAE35888.1| unnamed protein product [Mus musculus]
Length = 644
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L +++ L ++ +Q R+A+++T QM E+QELL+LFGVP+I AP EAEAQCA L+L
Sbjct: 471 SNLLAEQNSLKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLT 530
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 531 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 565
>gi|390457518|ref|XP_002742570.2| PREDICTED: DNA repair protein complementing XP-G cells [Callithrix
jacchus]
Length = 1638
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L + ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 1195 SNLLEQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 1254
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 1255 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 1289
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 52/69 (75%)
Query: 150 ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT 209
+S++SIWL+Q KG D G + NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQT
Sbjct: 482 MSNISIWLNQALKGVWDRHGNPIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQT 541
Query: 210 ISTLEKDRD 218
++ + +D
Sbjct: 542 LAKRRQRKD 550
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 12/123 (9%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPP 58
A+R+ K A+S++ K LLK L++Q + K + ALP V RE D++ LPP
Sbjct: 543 AKRRQRKDSASSDSRKTTEKLLKTFLKRQAIKTAFKSKRDEALPSLTQVRRENDIYVLPP 602
Query: 59 APAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTE 109
+ + EE+ + + +F + + ++DI SE FS+LPP+++HEILT+
Sbjct: 603 LQEEEKRSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTD 661
Query: 110 LLE 112
+ E
Sbjct: 662 MKE 664
>gi|148664472|gb|EDK96888.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Mus musculus]
Length = 1171
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L +++ L ++ +Q R+A+++T QM E+QELL+LFGVP+I AP EAEAQCA L+L
Sbjct: 740 SNLLAEQNSLKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLT 799
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 800 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 834
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G + NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDSHGNVIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQT 228
T++ + +D ++ K T
Sbjct: 87 TLAKRRQRKDSASIDSRKTT 106
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 12/136 (8%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPP--SVSREVDMFELPP 58
A+R+ K A+ ++ K LLK L++Q L + PP V R+ D++ LPP
Sbjct: 89 AKRRQRKDSASIDSRKTTEKLLKTFLKRQALKTAFRSSRHEAPPSLTQVQRQDDIYVLPP 148
Query: 59 APAQTVQDEEEDS--------DSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
P + EE+ D + + + ++DI SE FS+LPP+++HEILT++
Sbjct: 149 LPEEEKHSSEEEDEKQWQARMDQKQALQEEFFHNPQAIDIESEDFSSLPPEVKHEILTDM 208
Query: 111 LE--QRKLSSWHKMHE 124
E +R+ + + M E
Sbjct: 209 KEFTKRRRTLFEAMPE 224
>gi|187954383|gb|AAI41071.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Mus musculus]
Length = 1170
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L +++ L ++ +Q R+A+++T QM E+QELL+LFGVP+I AP EAEAQCA L+L
Sbjct: 740 SNLLAEQNSLKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLT 799
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 800 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 834
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G + NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDSHGNVIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQT 228
T++ + +D ++ K T
Sbjct: 87 TLAKRRQRKDSASIDSRKTT 106
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 14/137 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPP--SVSREVDMFELPP 58
A+R+ K A+ ++ K LLK L++Q L + PP V R+ D++ LPP
Sbjct: 89 AKRRQRKDSASIDSRKTTEKLLKTFLKRQALKTAFRSSRHEAPPSLTQVQRQDDIYVLPP 148
Query: 59 APAQTVQD------EEEDSDSDDTEA---KFRYADLHSVDINSEQFSALPPDMRHEILTE 109
P + ++ + D +A +F + + ++DI SE FS+LPP+++HEILT+
Sbjct: 149 LPEEEKHSSEEEDEKQWQARMDQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTD 207
Query: 110 LLE--QRKLSSWHKMHE 124
+ E +R+ + + M E
Sbjct: 208 MKEFTKRRRTLFEAMPE 224
>gi|449446847|ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cucumis sativus]
gi|449489542|ref|XP_004158342.1| PREDICTED: DNA repair protein UVH3-like [Cucumis sativus]
Length = 1541
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 73/103 (70%)
Query: 210 ISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
IS LE++R L E+ + R A ++ +M E QELLQ+FG+P+I+AP EAEAQCA +EL
Sbjct: 860 ISVLEQERLNLGDEQKRLERNAESVNSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL 919
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRY 312
N GV+TDDSD++LFGAR+VYKN FD + +V Y DI +
Sbjct: 920 ANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIEH 962
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 44/70 (62%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW+ Q K D G V NAHL+G + RICKLLF + KPVFVFDG P LK++
Sbjct: 27 LAIDASIWMVQFIKAMRDDRGEMVRNAHLLGFFRRICKLLFLRTKPVFVFDGATPALKRR 86
Query: 209 TISTLEKDRD 218
T+ + R+
Sbjct: 87 TLIARRRQRE 96
>gi|408360334|sp|P35689.4|ERCC5_MOUSE RecName: Full=DNA repair protein complementing XP-G cells homolog;
AltName: Full=DNA excision repair protein ERCC-5;
AltName: Full=Xeroderma pigmentosum group
G-complementing protein homolog
Length = 1170
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L +++ L ++ +Q R+A+++T QM E+QELL+LFGVP+I AP EAEAQCA L+L
Sbjct: 740 SNLLAEQNSLKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLT 799
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 800 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 834
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G + NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDSHGNVIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQT 228
T++ + +D ++ K T
Sbjct: 87 TLAKRRQRKDSASIDSRKTT 106
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 14/137 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPP--SVSREVDMFELPP 58
A+R+ K A+ ++ K LLK L++Q L + PP V R+ D++ LPP
Sbjct: 89 AKRRQRKDSASIDSRKTTEKLLKTFLKRQALKTAFRSSRHEAPPSLTQVQRQDDIYVLPP 148
Query: 59 APAQTVQD------EEEDSDSDDTEA---KFRYADLHSVDINSEQFSALPPDMRHEILTE 109
P + ++ + D +A +F + + ++DI SE FS+LPP+++HEILT+
Sbjct: 149 LPEEEKHSSEEEDEKQWQARMDQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTD 207
Query: 110 LLE--QRKLSSWHKMHE 124
+ E +R+ + + M E
Sbjct: 208 MKEFTKRRRTLFEAMPE 224
>gi|74215723|dbj|BAE23409.1| unnamed protein product [Mus musculus]
Length = 1166
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L +++ L ++ +Q R+A+++T QM E+QELL+LFGVP+I AP EAEAQCA L+L
Sbjct: 740 SNLLAEQNSLKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLT 799
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 800 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 834
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G + NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDSHGNVIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQT 228
T++ + +D ++ K T
Sbjct: 87 TLAKRRQRKDSASIDSRKTT 106
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 14/137 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPP--SVSREVDMFELPP 58
A+R+ K A+ ++ K LLK L++Q L + PP V R+ D++ LPP
Sbjct: 89 AKRRQRKDSASIDSRKTTEKLLKTFLKRQALKTAFRSSRHEAPPSLTQVQRQDDIYVLPP 148
Query: 59 APAQTVQD------EEEDSDSDDTEA---KFRYADLHSVDINSEQFSALPPDMRHEILTE 109
P + ++ + D +A +F + + ++DI SE FS+LPP+++HEILT+
Sbjct: 149 LPEEEKHSSEEEDEKQWQARMDQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTD 207
Query: 110 LLE--QRKLSSWHKMHE 124
+ E +R+ + + M E
Sbjct: 208 MKEFTKRRRTLFEAMPE 224
>gi|170172544|ref|NP_035859.2| DNA repair protein complementing XP-G cells homolog [Mus musculus]
Length = 1170
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L +++ L ++ +Q R+A+++T QM E+QELL+LFGVP+I AP EAEAQCA L+L
Sbjct: 740 SNLLAEQNSLKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLT 799
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 800 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 834
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G + NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDSHGNVIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQT 228
T++ + +D ++ K T
Sbjct: 87 TLAKRRQRKDSASIDSRKTT 106
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 14/137 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPP--SVSREVDMFELPP 58
A+R+ K A+ ++ K LLK L++Q L + PP V R+ D++ LPP
Sbjct: 89 AKRRQRKDSASIDSRKTTEKLLKTFLKRQALKTAFRSSRHEAPPSLTQVQRQDDIYVLPP 148
Query: 59 APAQTVQD------EEEDSDSDDTEA---KFRYADLHSVDINSEQFSALPPDMRHEILTE 109
P + ++ + D +A +F + + ++DI SE FS+LPP+++HEILT+
Sbjct: 149 LPEEEKHSSEEEDEKQWQARMDQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTD 207
Query: 110 LLE--QRKLSSWHKMHE 124
+ E +R+ + + M E
Sbjct: 208 MKEFTKRRRTLFEAMPE 224
>gi|157819261|ref|NP_001100380.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Rattus norvegicus]
gi|149046241|gb|EDL99134.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 (mapped) [Rattus norvegicus]
Length = 862
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L +++ L ++ +Q R+A+++T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 738 SNLLAEQNSLEAQKQQQDRIAASVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 797
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 798 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 832
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G ++ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNAIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQT 228
T++ + +D ++ K T
Sbjct: 87 TLAKRRQKKDSASIDSRKTT 106
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 12/123 (9%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL--GKNEMALPPPSVSREVDMFELPP 58
A+R+ K A+ ++ K LLK L++Q L +NE+ V RE D++ LPP
Sbjct: 89 AKRRQKKDSASIDSRKTTEKLLKTFLKRQALKTAFRSKRNEVLPSLTQVQREDDIYVLPP 148
Query: 59 ------APAQTVQDEEEDSDSDDTEA---KFRYADLHSVDINSEQFSALPPDMRHEILTE 109
++ +++ + D +A +F + + H++DI SE FS+LPP+++HEILT+
Sbjct: 149 LQEEEKHSSEEEDEKQWQARMDQKQALQEEF-FHNPHAIDIESEDFSSLPPEVKHEILTD 207
Query: 110 LLE 112
+ E
Sbjct: 208 MKE 210
>gi|426236893|ref|XP_004012399.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein complementing
XP-G cells [Ovis aries]
Length = 1200
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 749 SNLLTQQNSLKAQKQQQERVAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLT 808
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 809 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 843
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ +D
Sbjct: 87 TLAKRRHKKD 96
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 77/140 (55%), Gaps = 21/140 (15%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPPPSVSREVDMFELPPA 59
A+R+ K AAS++ LLK L++Q++ L K E LP + + D++ LPP
Sbjct: 89 AKRRHKKDLAASDSKTTTEKLLKTFLKRQVIKTALKSKREETLPSLTQVQRDDIYALPP- 147
Query: 60 PAQTVQDEEEDSDSDDTEAKFR-------------YADLHSVDINSEQFSALPPDMRHEI 106
+Q+ E++S ++ E +++ + + H+VDI SE F++LP +++HEI
Sbjct: 148 ----LQEREKNSSEEEDEKEWQERMSQKQALQEEFFHNPHAVDIESEDFNSLPLEVKHEI 203
Query: 107 LTELLE--QRKLSSWHKMHE 124
LT++ E +R+ + + M E
Sbjct: 204 LTDMKEFTKRRRTLFEAMPE 223
>gi|431913228|gb|ELK14910.1| DNA repair protein complementing XP-G cell [Pteropus alecto]
Length = 1074
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 74/107 (69%), Gaps = 4/107 (3%)
Query: 208 QTISTLEKD----RDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQ 263
+ + TLE + ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQ
Sbjct: 626 EELETLESNLLVQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQ 685
Query: 264 CASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
CA L+L + T G ITDDSDIWLFGAR VYKNFF K V Y D
Sbjct: 686 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFSKNKFVEYYQYVDF 732
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 82 YADLHSVDINSEQFSALPPDMRHEILTELLE--QRKLSSWHKMHE 124
+ + +VDI SE F +LPP+++HEILT++ E +R+ + + M E
Sbjct: 59 FQNPRAVDIESEDFCSLPPEVKHEILTDMKEFTKRRRTLFEAMPE 103
>gi|194378226|dbj|BAG57863.1| unnamed protein product [Homo sapiens]
Length = 1018
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 573 SNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 632
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VY+NFF+K V Y
Sbjct: 633 DQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYY 667
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 82 YADLHSVDINSEQFSALPPDMRHEILTELLE--QRKLSSWHKMHE 124
+ + ++DI SE FS+LPP+++HEILT++ E +R+ + + M E
Sbjct: 12 FHNPQAIDIESEDFSSLPPEVKHEILTDMKEFTKRRRTLFEAMPE 56
>gi|60811379|gb|AAX36171.1| excision repair cross-complementing rodent repair deficiency
complementation group 5 [synthetic construct]
Length = 1187
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 741 SNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 800
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VY+NFF+K V Y
Sbjct: 801 DQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYY 835
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ N HL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T+ + +D
Sbjct: 87 TLVKRRQRKD 96
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 14/136 (10%)
Query: 2 QRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPPA 59
+R+ K A+S++ K LLK L++Q + K + ALP V RE D++ LPP
Sbjct: 90 KRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFRSKRDEALPSLTQVRRENDLYVLPPL 149
Query: 60 PAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
+ EE+ + + +F + + ++DI SE FS+LPP+++HEILT++
Sbjct: 150 QEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTDM 208
Query: 111 LE--QRKLSSWHKMHE 124
E +R+ + + M E
Sbjct: 209 KEFTKRRRTLFEAMPE 224
>gi|297694381|ref|XP_002824460.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein complementing XP-G
cells [Pongo abelii]
Length = 1899
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 1454 SNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 1513
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 1514 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 1548
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 12/122 (9%)
Query: 2 QRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPPA 59
+R+ K A+ ++ K LLK L++Q + K + ALP V RE D++ LPP
Sbjct: 803 KRRQRKDLASGDSRKTTEKLLKTFLKRQAIKTAFRSKRDEALPSLTQVRRENDIYVLPPL 862
Query: 60 PAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
+ EE+ + + +F + + ++DI SE FS+LPP+++HEILT++
Sbjct: 863 QEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTDM 921
Query: 111 LE 112
E
Sbjct: 922 KE 923
>gi|78369362|ref|NP_001030353.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Bos taurus]
gi|77567831|gb|AAI07529.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Bos taurus]
gi|296481618|tpg|DAA23733.1| TPA: XPG-complementing protein [Bos taurus]
Length = 1201
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 757 SNLLTQQNTLKAQKQQQERVAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLT 816
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 817 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 851
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ +D
Sbjct: 87 TLAKRRHKKD 96
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 74/137 (54%), Gaps = 14/137 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPP 58
A+R+ K AAS++ LLK L++Q++ L K E ALP V RE D++ LPP
Sbjct: 89 AKRRHKKDLAASDSKTTTEKLLKTFLKRQVIKTALKSKREEALPSLTQVQREDDIYALPP 148
Query: 59 APAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTE 109
+ EE+ S + +F + + H+VDI SE F++LP +++HEILT+
Sbjct: 149 LQEKEKNSSEEEDEKEWQERMSQKQALQEEF-FQNPHAVDIESEDFNSLPLEVKHEILTD 207
Query: 110 LLE--QRKLSSWHKMHE 124
+ E +R+ + + M E
Sbjct: 208 MKEFTKRRRTLFEAMPE 224
>gi|33187721|gb|AAP97715.1|AF462447_1 excision repair protein ERCC5 [Homo sapiens]
gi|306742|gb|AAC37533.1| excision repair protein [Homo sapiens]
Length = 1186
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 741 SNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 800
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VY+NFF+K V Y
Sbjct: 801 DQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYY 835
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ N HL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T+ + +D
Sbjct: 87 TLVKRRQRKD 96
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 14/136 (10%)
Query: 2 QRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPPA 59
+R+ K A+S++ K LLK L++Q + K + ALP V RE D++ LPP
Sbjct: 90 KRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFRSKRDEALPSLTQVRRENDLYVLPPL 149
Query: 60 PAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
+ EE+ + + +F + + ++DI SE FS+LPP+++HEILT++
Sbjct: 150 QEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTDM 208
Query: 111 LE--QRKLSSWHKMHE 124
E +R+ + + M E
Sbjct: 209 KEFTKRRRTLFEAMPE 224
>gi|51988900|ref|NP_000114.2| DNA repair protein complementing XP-G cells [Homo sapiens]
gi|21619256|gb|AAH31522.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Homo sapiens]
gi|24079971|gb|AAN46091.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Homo sapiens]
gi|61364768|gb|AAX42600.1| excision repair cross-complementing rodent repair deficiency
complementation group 5 [synthetic construct]
gi|123981830|gb|ABM82744.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 (xeroderma pigmentosum,
complementation group G (Cockayne syndrome)) [synthetic
construct]
gi|123996661|gb|ABM85932.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 (xeroderma pigmentosum,
complementation group G (Cockayne syndrome)) [synthetic
construct]
Length = 1186
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 741 SNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 800
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VY+NFF+K V Y
Sbjct: 801 DQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYY 835
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ N HL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T+ + +D
Sbjct: 87 TLVKRRQRKD 96
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 14/136 (10%)
Query: 2 QRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPPA 59
+R+ K A+S++ K LLK L++Q + K + ALP V RE D++ LPP
Sbjct: 90 KRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFRSKRDEALPSLTQVRRENDLYVLPPL 149
Query: 60 PAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
+ EE+ + + +F + + ++DI SE FS+LPP+++HEILT++
Sbjct: 150 QEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTDM 208
Query: 111 LE--QRKLSSWHKMHE 124
E +R+ + + M E
Sbjct: 209 KEFTKRRRTLFEAMPE 224
>gi|298111|emb|CAA49598.1| XP-G factor [Homo sapiens]
gi|119629476|gb|EAX09071.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 (xeroderma pigmentosum,
complementation group G (Cockayne syndrome)), isoform
CRA_a [Homo sapiens]
Length = 1186
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 741 SNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 800
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VY+NFF+K V Y
Sbjct: 801 DQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYY 835
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ N HL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T+ + +D
Sbjct: 87 TLVKRRQRKD 96
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 14/136 (10%)
Query: 2 QRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPPA 59
+R+ K A+S++ K LLK L++Q + K + ALP V RE D++ LPP
Sbjct: 90 KRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFRSKRDEALPSLTQVRRENDLYVLPPL 149
Query: 60 PAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
+ EE+ + + +F + + ++DI SE FS+LPP+++HEILT++
Sbjct: 150 QEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTDM 208
Query: 111 LE--QRKLSSWHKMHE 124
E +R+ + + M E
Sbjct: 209 KEFTKRRRTLFEAMPE 224
>gi|205371791|sp|P28715.3|ERCC5_HUMAN RecName: Full=DNA repair protein complementing XP-G cells; AltName:
Full=DNA excision repair protein ERCC-5; AltName:
Full=Xeroderma pigmentosum group G-complementing protein
gi|9587154|gb|AAF89179.1| xeroderma pigmentosum complementation group G protein splice
variant [Homo sapiens]
Length = 1186
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 741 SNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 800
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VY+NFF+K V Y
Sbjct: 801 DQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYY 835
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ N HL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T+ + +D
Sbjct: 87 TLVKRRQRKD 96
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 14/136 (10%)
Query: 2 QRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPPA 59
+R+ K A+S++ K LLK L++Q + K + ALP V RE D++ LPP
Sbjct: 90 KRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFRSKRDEALPSLTQVRRENDLYVLPPL 149
Query: 60 PAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
+ EE+ + + +F + + ++DI SE FS+LPP+++HEILT++
Sbjct: 150 QEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTDM 208
Query: 111 LE--QRKLSSWHKMHE 124
E +R+ + + M E
Sbjct: 209 KEFTKRRRTLFEAMPE 224
>gi|354501934|ref|XP_003513043.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Cricetulus griseus]
Length = 1176
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L +++ L ++ +Q R+A+++T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 736 SNLLAEQNSLEAQKQQQERIAASVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 795
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 796 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 830
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G V NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNPVENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ + +D
Sbjct: 87 TLAKRRQKKD 96
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 12/123 (9%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPP 58
A+R+ K A++++ + LLK L++Q L K ALP V RE D++ LPP
Sbjct: 89 AKRRQKKDSASTDSRRTTEKLLKTFLKRQALKTAFRSKRNEALPSLTQVQREDDIYVLPP 148
Query: 59 ------APAQTVQDEEEDSDSDDTEA---KFRYADLHSVDINSEQFSALPPDMRHEILTE 109
++ +++ + D +A +F + + ++DI SE FS+LPP+++HEILT+
Sbjct: 149 LQEEEKHSSEEEDEKQWQARMDQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTD 207
Query: 110 LLE 112
+ E
Sbjct: 208 MKE 210
>gi|410215558|gb|JAA04998.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Pan troglodytes]
gi|410261564|gb|JAA18748.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Pan troglodytes]
gi|410301776|gb|JAA29488.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Pan troglodytes]
gi|410335601|gb|JAA36747.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Pan troglodytes]
Length = 1186
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 741 SNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 800
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VY+NFF+K V Y
Sbjct: 801 DQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYY 835
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ N HL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T+ + +D
Sbjct: 87 TLVKRRQRKD 96
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 14/136 (10%)
Query: 2 QRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPPA 59
+R+ K A+S++ K LLK L++Q + K + ALP V RE D++ LPP
Sbjct: 90 KRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFRSKRDEALPSLTQVRRENDIYVLPPL 149
Query: 60 PAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
+ EE+ + + +F + + ++DI SE FS+LPP+++HEILT++
Sbjct: 150 QEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTDM 208
Query: 111 LE--QRKLSSWHKMHE 124
E +R+ + + M E
Sbjct: 209 KEFTKRRRTLFEAMPE 224
>gi|344244135|gb|EGW00239.1| DNA repair protein complementing XP-G cells-like [Cricetulus
griseus]
Length = 1028
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L +++ L ++ +Q R+A+++T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 588 SNLLAEQNSLEAQKQQQERIAASVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 647
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 648 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 682
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 86 HSVDINSEQFSALPPDMRHEILTELLE--QRKLSSWHKMHE 124
++DI SE FS+LPP+++HEILT++ E +R+ + + M E
Sbjct: 16 QAIDIESEDFSSLPPEVKHEILTDMKEFTKRRRTLFEAMPE 56
>gi|281350378|gb|EFB25962.1| hypothetical protein PANDA_002828 [Ailuropoda melanoleuca]
Length = 1192
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 68/89 (76%)
Query: 217 RDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGV 276
++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L + T G
Sbjct: 755 QNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLTDQTSGT 814
Query: 277 ITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 815 ITDDSDIWLFGARHVYKNFFNKNKFVEYY 843
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q +G D G S+ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALRGVRDCHGNSIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ +D
Sbjct: 87 TLAKRRHRKD 96
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 15/138 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPPS---VSREVDMFELP 57
A+R+ K A +++ K LLK L++Q + L PS V RE D++ LP
Sbjct: 89 AKRRHRKDLATTDSRKTTEKLLKTFLKRQAIKTALKSKRQDEDLPSLTQVQREDDIYVLP 148
Query: 58 PAPAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILT 108
P + EE+ S + +F + + H++DI SE FS+LP +++HEILT
Sbjct: 149 PLQKEEKNSSEEEDEREWQERMSQKQALQEEF-FHNPHAIDIESEDFSSLPLEIKHEILT 207
Query: 109 ELLE--QRKLSSWHKMHE 124
++ E +R+ + + M E
Sbjct: 208 DMKEFTKRRRTLFEAMPE 225
>gi|332841607|ref|XP_003314253.1| PREDICTED: DNA repair protein complementing XP-G cells isoform 1
[Pan troglodytes]
Length = 1186
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 741 SNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 800
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VY+NFF+K V Y
Sbjct: 801 DQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYY 835
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ N HL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T+ + +D
Sbjct: 87 TLVKRRQRKD 96
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 14/136 (10%)
Query: 2 QRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPPA 59
+R+ K A+S++ K LLK L++Q + K + ALP V RE D++ LPP
Sbjct: 90 KRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFRSKRDEALPSLTQVRRENDIYVLPPL 149
Query: 60 PAQTVQDEEEDSDSDDT---------EAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
+ EE+ + + + +F + + ++DI SE FS+LPP+++HEILT++
Sbjct: 150 QEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTDM 208
Query: 111 LE--QRKLSSWHKMHE 124
E +R+ + + M E
Sbjct: 209 KEFTKRRRTLFEAMPE 224
>gi|303607|dbj|BAA03812.1| ERCC5 [Homo sapiens]
Length = 1185
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 741 SNLLAQQNSLKAQKQQQERFAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAVLDLT 800
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VY+NFF+K V Y
Sbjct: 801 DQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYY 835
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 49/70 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ N H + L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENPHPLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T+ + +D
Sbjct: 87 TLVKRRQRKD 96
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 14/136 (10%)
Query: 2 QRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPPA 59
+R+ K A+S++ K LLK L++Q + + + ALP V RE D++ LPP
Sbjct: 90 KRRQRKDLASSDSRKTTEKLLKTFLKRQAIQTSFRSQRDEALPSLTQVRRENDLYVLPPL 149
Query: 60 PAQTVQDEEEDSDSDDT---------EAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
+ EE+ + + + +F + + ++DI SE FS+LPP+++HEILT++
Sbjct: 150 QEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTDM 208
Query: 111 LE--QRKLSSWHKMHE 124
E +R+ + + M E
Sbjct: 209 KEFTKRRRTLFEAMPE 224
>gi|426375915|ref|XP_004054761.1| PREDICTED: DNA repair protein complementing XP-G cells [Gorilla
gorilla gorilla]
Length = 1186
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 741 SNLLAQQNSLKAQKQQQERVAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 800
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VY+NFF+K V Y
Sbjct: 801 DQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYY 835
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ N HL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T+ + +D
Sbjct: 87 TLVKRRQRKD 96
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 14/136 (10%)
Query: 2 QRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPPA 59
+R+ K A+S++ K LLK L++Q + K + ALP V RE D++ LPP
Sbjct: 90 KRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFRSKRDEALPSLTQVRRENDLYVLPPL 149
Query: 60 PAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
+ EE+ + + +F + + ++DI SE FS+LPP+++HEILT++
Sbjct: 150 QEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTDM 208
Query: 111 LE--QRKLSSWHKMHE 124
E +R+ + + M E
Sbjct: 209 KEFTKRRRTLFEAMPE 224
>gi|332242072|ref|XP_003270208.1| PREDICTED: DNA repair protein complementing XP-G cells isoform 1
[Nomascus leucogenys]
Length = 1189
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 741 SNLLAQQNSLKAQKQQQERTAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 800
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 801 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 835
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 50/70 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G + N HL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAIDISIWLNQALKGVRDRHGDPIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ + +D
Sbjct: 87 TLAKRRQRKD 96
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 14/137 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPP 58
A+R+ K A+S++ K LLK L++Q + K + LP V RE D++ LPP
Sbjct: 89 AKRRQRKDSASSDSRKTTEKLLKTFLKRQAIKTAFRSKRDETLPSLTQVRRENDIYVLPP 148
Query: 59 APAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTE 109
+ EE+ + + +F + + ++DI SE FS+LPP+++HEILT+
Sbjct: 149 LQEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTD 207
Query: 110 LLE--QRKLSSWHKMHE 124
+ E +R+ + + M E
Sbjct: 208 MKEFTKRRRTLFEAMPE 224
>gi|410947676|ref|XP_003980569.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein complementing
XP-G cells [Felis catus]
Length = 1128
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 68/89 (76%)
Query: 217 RDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGV 276
++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L + T G
Sbjct: 691 QNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLTDQTSGT 750
Query: 277 ITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 751 ITDDSDIWLFGARHVYKNFFNKNKFVEYY 779
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q +G D G S+ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALRGVRDRHGNSIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T+ + +D
Sbjct: 87 TLVRRRQRKD 96
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 13/135 (9%)
Query: 2 QRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPPPSVSREVDMFELPPAP 60
+R+ K A S++ K LLK L++Q + L K + ALP + + D++ LPP
Sbjct: 90 RRRQRKDLATSDSKKTTEKLLKTFLKRQAIKTALKSKRDEALPSLTQVQRDDLYALPPLQ 149
Query: 61 AQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTELL 111
+ EE+ S + +F + + H++DI SE FS+LP +++HEILT++
Sbjct: 150 KEEKNSSEEEDEKEWQERMSQKQALQEEF-FHNPHAIDIESEDFSSLPLEIKHEILTDMK 208
Query: 112 E--QRKLSSWHKMHE 124
E +R+ + + M E
Sbjct: 209 EFTKRRRTLFEAMPE 223
>gi|301758086|ref|XP_002914899.1| PREDICTED: DNA repair protein complementing XP-G cells-like
[Ailuropoda melanoleuca]
Length = 1644
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 71/95 (74%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
++L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 1201 NSLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLT 1260
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 1261 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 1295
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 49/61 (80%)
Query: 150 ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT 209
+S++SIWL+Q +G D G S+ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQT
Sbjct: 481 MSNISIWLNQALRGVRDCHGNSIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQT 540
Query: 210 I 210
+
Sbjct: 541 L 541
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 12/122 (9%)
Query: 2 QRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPPA 59
+R+ K A +++ K LLK L++Q + L K + LP V RE D++ LPP
Sbjct: 543 RRRHRKDLATTDSRKTTEKLLKTFLKRQAIKTALKSKRDEDLPSLTQVQREDDIYVLPPL 602
Query: 60 PAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
+ EE+ S + +F + + H++DI SE FS+LP +++HEILT++
Sbjct: 603 QKEEKNSSEEEDEREWQERMSQKQALQEEF-FHNPHAIDIESEDFSSLPLEIKHEILTDM 661
Query: 111 LE 112
E
Sbjct: 662 KE 663
>gi|324715041|ref|NP_001191354.1| BIVM-ERCC5 protein [Homo sapiens]
Length = 1640
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 1195 SNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 1254
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VY+NFF+K V Y
Sbjct: 1255 DQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYY 1289
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 51/69 (73%)
Query: 150 ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT 209
+S++SIWL+Q KG D G S+ N HL+ L+HR+CKLLFF+I+P+FVFDG P LKKQT
Sbjct: 482 MSNISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQT 541
Query: 210 ISTLEKDRD 218
+ + +D
Sbjct: 542 LVKRRQRKD 550
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 2 QRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPPA 59
+R+ K A+S++ K LLK L++Q + K + ALP V RE D++ LPP
Sbjct: 544 KRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFRSKRDEALPSLTQVRRENDLYVLPPL 603
Query: 60 PAQTVQDEEEDSDSDDT---------EAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
+ EE+ + + + +F + + ++DI SE FS+LPP+++HEILT++
Sbjct: 604 QEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTDM 662
Query: 111 LE 112
E
Sbjct: 663 KE 664
>gi|62088204|dbj|BAD92549.1| DNA-repair protein complementing XP-G cells variant [Homo sapiens]
Length = 1611
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 1166 SNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 1225
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VY+NFF+K V Y
Sbjct: 1226 DQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYY 1260
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 51/69 (73%)
Query: 150 ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT 209
+S++SIWL+Q KG D G S+ N HL+ L+HR+CKLLFF+I+P+FVFDG P LKKQT
Sbjct: 453 MSNISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQT 512
Query: 210 ISTLEKDRD 218
+ + +D
Sbjct: 513 LVKRRQRKD 521
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 12/122 (9%)
Query: 2 QRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPPA 59
+R+ K A+S++ K LLK L++Q + K + ALP V RE D++ LPP
Sbjct: 515 KRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFRSKRDEALPSLTQVRRENDLYVLPPL 574
Query: 60 PAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
+ EE+ + + +F + + ++DI SE FS+LPP+++HEILT++
Sbjct: 575 QEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTDM 633
Query: 111 LE 112
E
Sbjct: 634 KE 635
>gi|338715323|ref|XP_001494708.3| PREDICTED: DNA repair protein complementing XP-G cells [Equus
caballus]
Length = 1190
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L + L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 746 SNLLAQQTSLKAQKQQQERVAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLT 805
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 806 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 840
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDHHGNSIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ +D
Sbjct: 87 TLAKRRHRKD 96
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPP 58
A+R+ K A S++ K LLK L++Q + L K + ALP V RE D++ LPP
Sbjct: 89 AKRRHRKDLATSDSRKTTEKLLKTFLKRQAIKSALKSKRDEALPSLTQVRREDDIYVLPP 148
Query: 59 APAQTVQDEEEDSDSDDT---------EAKFRYADLHSVDINSEQFSALPPDMRHEILTE 109
+ EE+ + + + +F + + +VDI SE F +LPP+++HEILT+
Sbjct: 149 LQEEEKNSSEEEDEKEWQERMNQKQALQEEF-FHNPQAVDIESEDFCSLPPEIKHEILTD 207
Query: 110 LLE--QRKLSSWHKMHE 124
+ E +R+ + + M E
Sbjct: 208 MKEFTKRRRTLFEAMPE 224
>gi|440901361|gb|ELR52322.1| DNA repair protein complementing XP-G cells [Bos grunniens mutus]
Length = 1202
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 758 SNLLTQQNTLKSQKQQQERVAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLT 817
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 818 DQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 852
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ +D
Sbjct: 87 TLAKRRHKKD 96
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 74/138 (53%), Gaps = 15/138 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLG--KNEMALPP-PSVSREVDMFELP 57
A+R+ K AAS++ LLK L++Q++ L + E ALP V RE D++ LP
Sbjct: 89 AKRRHKKDLAASDSKTTTEKLLKTFLKRQVIKTALKSKRQEEALPSLTQVQREDDIYALP 148
Query: 58 PAPAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILT 108
P + EE+ S + +F + + H+VDI SE F++LP +++HEILT
Sbjct: 149 PLQEKEKNSSEEEDEKEWQERMSQKQALQEEF-FQNPHAVDIESEDFNSLPLEVKHEILT 207
Query: 109 ELLE--QRKLSSWHKMHE 124
++ E +R+ + + M E
Sbjct: 208 DMKEFTKRRRTLFEAMPE 225
>gi|397524400|ref|XP_003832181.1| PREDICTED: DNA repair protein complementing XP-G cells [Pan paniscus]
Length = 1754
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
S L ++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L
Sbjct: 1309 SNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLT 1368
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+ T G ITDDSDIWLFGAR VY+NFF+K V Y
Sbjct: 1369 DQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYY 1403
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 51/69 (73%)
Query: 150 ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT 209
+S++SIWL+Q KG D G S+ N HL+ L+HR+CKLLFF+I+P+FVFDG P LKKQT
Sbjct: 596 MSNISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQT 655
Query: 210 ISTLEKDRD 218
+ + +D
Sbjct: 656 LVKRRQRKD 664
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 12/122 (9%)
Query: 2 QRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPPA 59
+R+ K A+S++ K LLK L++Q + K + ALP V RE D++ LPP
Sbjct: 658 KRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFRSKRDEALPSLTQVRRENDIYVLPPL 717
Query: 60 PAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
+ EE+ + + +F + + ++DI SE FS+LPP+++HEILT++
Sbjct: 718 QEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTDM 776
Query: 111 LE 112
E
Sbjct: 777 KE 778
>gi|326913904|ref|XP_003203272.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Meleagris gallopavo]
Length = 1121
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 72/99 (72%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
L +++ L ++ +Q R+AS++T QM E+QELL+LFG+P+I AP EAEAQCA L+L +
Sbjct: 697 LSAEQEMLQSQKQQQERVASSVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLTDQ 756
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
T G ITDDSD+WLFGAR VYKNFF + +V Y D +
Sbjct: 757 TSGTITDDSDVWLFGARHVYKNFFSQNKYVEYYQYVDFQ 795
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 49/63 (77%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G ++ NAHL+ L++R+CKLLFF+I+PVFVFDG P LK+Q
Sbjct: 27 LAVDISIWLNQAIKGVRDRHGNTIQNAHLLTLFNRLCKLLFFRIRPVFVFDGEAPLLKRQ 86
Query: 209 TIS 211
T++
Sbjct: 87 TLA 89
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 22/129 (17%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREV--DMFEL 56
A+R+ K A S++ K LLK L++Q + L GK+ P V RE D++ L
Sbjct: 89 AKRRHRKEMAISDSRKTAEKLLKTFLKRQAIKAALTGKSNEVYPSITQVRREEIDDIYVL 148
Query: 57 PPAPAQTVQDEEEDSDSDD---------TEAKFRYADL----HSVDINSEQFSALPPDMR 103
P ++QDEE++S ++ T+ K L H++DI+SE F+ LPP+++
Sbjct: 149 P-----SLQDEEKNSSEEEEEKEWEIRMTQKKLLQEQLFENPHAIDIDSEDFNKLPPEVK 203
Query: 104 HEILTELLE 112
HEIL+++ E
Sbjct: 204 HEILSDMKE 212
>gi|359322522|ref|XP_003639860.1| PREDICTED: DNA repair protein complementing XP-G cells-like [Canis
lupus familiaris]
Length = 1185
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 72/102 (70%), Gaps = 4/102 (3%)
Query: 208 QTISTLEKD----RDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQ 263
+ + TLE D + L ++ +Q R A+T+T QM E+QELL+LFG+P+I AP EAEAQ
Sbjct: 735 EELETLENDLLAQQHSLKAQQQQQERTAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQ 794
Query: 264 CASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
CA L+L + T G ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 795 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYY 836
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q +G D G S+ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALRGVRDCHGNSIGNAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ +D
Sbjct: 87 TLAKRRHRKD 96
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 14/137 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPP 58
A+R+ K AA+++ K LLK L++Q + L K + ALP V RE D++ LPP
Sbjct: 89 AKRRHRKDLAATDSRKTTEKLLKTFLKRQAIKTALKSKRDEALPSLTQVRREDDIYVLPP 148
Query: 59 APAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTE 109
+ EE+ S + +F + + H++DI SE FS+LP +++HEILT+
Sbjct: 149 LQKEEKNSSEEEDEREWQERMSQKQALQEEF-FHNPHAIDIESEDFSSLPLEIKHEILTD 207
Query: 110 LLE--QRKLSSWHKMHE 124
+ E +R+ + + M E
Sbjct: 208 MKEFTKRRRTLFEAMPE 224
>gi|334346854|ref|XP_001376389.2| PREDICTED: hypothetical protein LOC100025456 [Monodelphis
domestica]
Length = 1410
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%)
Query: 216 DRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQG 275
+++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L + T G
Sbjct: 900 EQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLTDQTSG 959
Query: 276 VITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
ITDDSDIWLFGAR VYKNFF K V Y D
Sbjct: 960 TITDDSDIWLFGARHVYKNFFSKDKFVEYYQYVDF 994
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 53/69 (76%)
Query: 150 ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT 209
+S++SIWL+Q KG D G SV NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQT
Sbjct: 483 MSNISIWLNQALKGVRDRHGNSVENAHLLTLFHRLCKLLFFRIRPIFVFDGEAPLLKKQT 542
Query: 210 ISTLEKDRD 218
++ + +D
Sbjct: 543 LAKRRQRKD 551
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPP 58
A+R+ K A++++ K LLK L++Q + L GK + ALP V RE D++ LP
Sbjct: 544 AKRRQRKDLASNDSKKTTEKLLKTFLKRQAIKTALRGKRDEALPSLTQVQREDDIYVLPS 603
Query: 59 --------APAQTVQDEEEDSDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
+ + ++ + + T + + + +++DI SE FS LPP+++HEILT++
Sbjct: 604 LQEEEKNSSEEEDEKEWQIRMNQKQTLQEEFFHNPNAIDIESEDFSCLPPEVKHEILTDM 663
Query: 111 LE 112
E
Sbjct: 664 KE 665
>gi|348583617|ref|XP_003477569.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein complementing
XP-G cells-like [Cavia porcellus]
Length = 1169
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 74/102 (72%), Gaps = 4/102 (3%)
Query: 208 QTISTLEKD----RDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQ 263
+ + +LE D ++ L ++ +Q R+AST++ QM E+QELL+LFGVP+I AP EAEAQ
Sbjct: 716 EELESLESDLLAQQNSLSAQKQQQERIASTVSGQMFLESQELLRLFGVPYIQAPMEAEAQ 775
Query: 264 CASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
CA L+L + T G IT+DSDIWLFGAR VYKNFF+K V Y
Sbjct: 776 CAILDLTDQTSGTITEDSDIWLFGARHVYKNFFNKNKFVEYY 817
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRQGNSIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T++ + +D
Sbjct: 87 TLAKRRQRKD 96
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 11/135 (8%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLG-KNEMALPPPSVSREVDMFELPP- 58
A+R+ K A+S++ K LL+ L++Q + K ALP + D++ LPP
Sbjct: 89 AKRRQRKDLASSDSRKTTEKLLQTFLKRQAIKATFKRKRNEALPSLTQVHREDIYALPPL 148
Query: 59 -------APAQTVQDEEEDSDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTELL 111
+ + + +E D + + + ++DI SE FS+LP +++HEILT++
Sbjct: 149 QKEEKHSSEEEDEKAWQERMDQKQVLQEEFFRNPQAIDIESEDFSSLPLEVKHEILTDMK 208
Query: 112 E--QRKLSSWHKMHE 124
E +R+ + + M E
Sbjct: 209 EFTKRRRTLFEAMPE 223
>gi|328715848|ref|XP_001946726.2| PREDICTED: hypothetical protein LOC100169397 [Acyrthosiphon pisum]
Length = 951
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 74/103 (71%)
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
TL K ++ L + K R+AS++T++++ E + LL+LFG+P+I AP EAEAQCA LE
Sbjct: 637 TLVKRQNDLASLQRKSDRMASSVTQKITSEIKGLLKLFGIPYITAPMEAEAQCAFLEKIG 696
Query: 272 HTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
T+G +TDDSD+WLFGA VYK+FFD + +V ++ + DI+ F
Sbjct: 697 RTEGTVTDDSDVWLFGANVVYKDFFDNQKYVKQFKSIDIKQQF 739
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Query: 140 IVINKLLVDLIS-DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVF 198
I + KL ++S DVSIW++Q+ KG + G+ N HLI ++HRICKLLF+ IKP+FVF
Sbjct: 17 IPVEKLENKVLSIDVSIWMYQIIKGVQESDHGATTNRHLIVMFHRICKLLFYGIKPIFVF 76
Query: 199 DGGVPQLKKQTISTLEKDRDQLLLERGK-QTRLASTITEQMS 239
DGGVP+LKK TI+ + + + GK + +L + EQ +
Sbjct: 77 DGGVPELKKITIAQRQAQKSRAKKSTGKTKEKLLKNMLEQAA 118
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPPSVSR---------EV 51
AQR+ KS+A + K + LLKN+LEQ L V+ +S+ E+
Sbjct: 89 AQRQAQKSRAKKSTGKTKEKLLKNMLEQAALKTVMNAGNALTEDEVISKTVDSLNKGAEI 148
Query: 52 DMFELP 57
D+FELP
Sbjct: 149 DLFELP 154
>gi|77736641|ref|NP_001029995.1| XPG-complementing protein [Gallus gallus]
gi|71725078|dbj|BAE16755.1| XPG [Gallus gallus]
Length = 1118
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 72/99 (72%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
L +++ L ++ +Q R+A+++T QM E+QELL+LFG+P+I AP EAEAQCA L+L +
Sbjct: 697 LSAEQEMLQSQKQQQERVATSVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLTDQ 756
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
T G ITDDSD+WLFGAR VYKNFF + +V Y D +
Sbjct: 757 TSGTITDDSDVWLFGARHVYKNFFSRNKYVEYYQYIDFQ 795
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 49/63 (77%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G ++ NAHL+ L++R+CKLLFF+I+PVFVFDG P LK+Q
Sbjct: 27 LAVDISIWLNQAVKGVRDRHGNTIQNAHLLTLFNRLCKLLFFRIRPVFVFDGEAPLLKRQ 86
Query: 209 TIS 211
T++
Sbjct: 87 TLA 89
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 22/129 (17%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREV--DMFEL 56
A+R+ K A ++ K LLK L++Q + L GK+ P V RE DM+ L
Sbjct: 89 AKRRHRKELAVIDSRKTAEKLLKTFLKRQAIKAALTGKSNEVYPSITQVRREEIDDMYVL 148
Query: 57 PPAPAQTVQDEEEDSDSDD---------TEAKFRYADL----HSVDINSEQFSALPPDMR 103
P +++D+E++S ++ T+ K L H++DI+SE F+ LPP+++
Sbjct: 149 P-----SIEDDEKNSSEEEEEKEWEIRMTQKKLLQEQLFENPHAIDIDSEDFNKLPPEVK 203
Query: 104 HEILTELLE 112
HEILT++ E
Sbjct: 204 HEILTDMKE 212
>gi|395527335|ref|XP_003765805.1| PREDICTED: uncharacterized protein LOC100931484 [Sarcophilus
harrisii]
Length = 1088
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%)
Query: 216 DRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQG 275
+++ L ++ +Q R+A+T+T QM E+QELL+LFG+P+I AP EAEAQCA L+L + T G
Sbjct: 649 EQNSLEAQKQQQERIAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLTDQTSG 708
Query: 276 VITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
ITDDSDIWLFGAR VYKNFF K V Y D
Sbjct: 709 TITDDSDIWLFGARHVYKNFFSKDKFVEYYQYIDF 743
>gi|449272261|gb|EMC82261.1| DNA repair protein complementing XP-G cell [Columba livia]
Length = 1133
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 72/99 (72%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
L +++ L ++ +Q R+A+++T QM E+QELL+LFG+P+I AP EAEAQCA L+L +
Sbjct: 697 LSAEQNMLHAQKQQQERVAASVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAVLDLTDQ 756
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
T G ITDDSD+WLFGAR VYKNFF + +V Y D +
Sbjct: 757 TSGTITDDSDVWLFGARHVYKNFFSQNKYVEYYQYVDFQ 795
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G SV +AHL+ L+HR+CKLLFF+I+PVFVFDG P LK+Q
Sbjct: 27 LAVDISIWLNQAIKGARDRGGNSVRSAHLLTLFHRLCKLLFFRIRPVFVFDGEAPLLKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQT 228
T++ + R ++ + ++T
Sbjct: 87 TLAK-RRQRKEIAISDSRKT 105
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREV--DMFEL 56
A+R+ K A S++ K LLK L++Q++ L GK+ A P V RE DM+ L
Sbjct: 89 AKRRQRKEIAISDSRKTTEKLLKTFLKRQVIKTALKGKSNEAFPSITQVRREEIDDMYVL 148
Query: 57 PPAPAQTVQDEEEDS----DSDDTEAKFRYADL----HSVDINSEQFSALPPDMRHEILT 108
P + EE+ + ++ K A L +SVDI SE F LPP+++HEILT
Sbjct: 149 PSLEDEEKDSSEEEEEKEWEVRMSQKKMLQAKLCENPNSVDIESEDFKKLPPEIKHEILT 208
Query: 109 ELLE--QRKLSSWHKMHE 124
++ E +RK + + M E
Sbjct: 209 DMKEFTKRKRTLFEAMPE 226
>gi|270006914|gb|EFA03362.1| hypothetical protein TcasGA2_TC013347 [Tribolium castaneum]
Length = 1015
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 59/75 (78%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L DVSIWLHQ+ KG D G +VP+AHL+G+YHR+CKLL+F+IKPVFVFDGGVP LK+Q
Sbjct: 27 LAVDVSIWLHQIVKGFQDAKGAAVPHAHLLGIYHRVCKLLYFRIKPVFVFDGGVPVLKRQ 86
Query: 209 TISTLEKDRDQLLLE 223
TI+ + + + L E
Sbjct: 87 TIALRNQQKSKTLSE 101
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
L K++ +LL+E+ + R A ITEQM +EAQELL+LFGVP+I+AP EAEAQCA LEL
Sbjct: 652 LRKEQTELLVEKQTKERTAGNITEQMFQEAQELLELFGVPYIIAPMEAEAQCAFLEL 708
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 82/145 (56%), Gaps = 10/145 (6%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMA-----LPPPSVSREVD--M 53
A R KSK S AD++ +LL L++ ++ VL + A P S++ D +
Sbjct: 89 ALRNQQKSKTLSEADRIHKNLLSALVKHTAISKVLSEKAKAAITASTSPTKKSKQDDDEL 148
Query: 54 FELPPAPAQTVQDEEEDSDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTELLEQ 113
+ LPP+ Q++ SDSD ++ DLHS+D S +F +LP D+RHEIL++L +
Sbjct: 149 YALPPS--QSLDSTLSQSDSDSEDSGLPRYDLHSIDTESAEFKSLPADVRHEILSDLKDT 206
Query: 114 RKLSSWHKMHEMP-QNDQHSMLEFR 137
RK SSW ++HEMP Q+D S + +
Sbjct: 207 RKQSSWGRIHEMPTQSDNFSTYQMK 231
>gi|260825215|ref|XP_002607562.1| hypothetical protein BRAFLDRAFT_208062 [Branchiostoma floridae]
gi|229292910|gb|EEN63572.1| hypothetical protein BRAFLDRAFT_208062 [Branchiostoma floridae]
Length = 162
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 71/98 (72%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
L+ +R L ++ +Q +LA++ITEQM E+QELL+LFG+P++ +P EAEAQCA L+
Sbjct: 12 LQTERRTLQAQQARQEKLAASITEQMYVESQELLRLFGIPYVQSPTEAEAQCAFLDQSKQ 71
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
T+G ITDDSD+WLFG R VYKNFF ++ + + D+
Sbjct: 72 TEGTITDDSDVWLFGGRQVYKNFFSQQRDMEVFKYKDV 109
>gi|291235424|ref|XP_002737645.1| PREDICTED: DNA-repair protein complementing XP-G cells homolog
[Saccoglossus kowalevskii]
Length = 854
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 65/91 (71%)
Query: 220 LLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITD 279
L+ E+ KQ R ++IT+QM EA+ELL LFG+P+I + EAEAQCA L L + T G ITD
Sbjct: 641 LMAEKNKQERFGASITDQMYVEAKELLTLFGLPYITSVQEAEAQCAYLNLTDQTYGTITD 700
Query: 280 DSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
DSDIWLFG + VYKN F++K V Y A +I
Sbjct: 701 DSDIWLFGGKRVYKNMFNQKKFVECYIAENI 731
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 56/78 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+S+WL+Q KG G + NAHL+ L++RICKLLF++IKPVFVFDGGVP LKKQ
Sbjct: 27 LAVDISLWLNQAVKGMRGRDGNPIANAHLVVLFNRICKLLFYRIKPVFVFDGGVPLLKKQ 86
Query: 209 TISTLEKDRDQLLLERGK 226
T++ + +D+ + E K
Sbjct: 87 TLALRSQRQDKAVKESNK 104
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 78/139 (56%), Gaps = 14/139 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMA----LPPPSVSREVDMFEL 56
A R + KA ++K R LL+N L++ + VLG N +A + S S++ DM+EL
Sbjct: 89 ALRSQRQDKAVKESNKARQKLLQNFLKKTAITTVLGTNVVASTSHVIISSPSKQTDMYEL 148
Query: 57 PPAPAQTVQDEEEDSDSDDTEAKF--------RYADLHSVDINSEQFSALPPDMRHEILT 108
P + QD E S D+ ++ ++ D++ +DI+SE F ALP +++HE+L
Sbjct: 149 PAM--KPSQDNLESDSSQDSWSQDIQQELIQEQFQDINDIDIHSESFRALPLEIQHELLV 206
Query: 109 ELLEQRKLSSWHKMHEMPQ 127
E+ + RK+ S ++E+P+
Sbjct: 207 EMKDHRKMRSVTLVNELPK 225
>gi|297600506|ref|NP_001049313.2| Os03g0205400 [Oryza sativa Japonica Group]
gi|255674294|dbj|BAF11227.2| Os03g0205400 [Oryza sativa Japonica Group]
Length = 1470
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 99/170 (58%), Gaps = 18/170 (10%)
Query: 143 NKLLVD-LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKP-VFVFDG 200
N LL+D L+ D ++ + + T DL+ ++ + K+ V ++
Sbjct: 775 NDLLMDELVPDTAVQKENMIQRTTDLS---------------TSEINYTKLNDNVGIYSV 819
Query: 201 GVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEA 260
L+K+ +S L ++++ L ER K A +++ +M E QELLQ+FG+P+I+AP EA
Sbjct: 820 SASNLEKE-LSLLRQEQEYLGNERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPMEA 878
Query: 261 EAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
EAQCA +E+ N GV+TDDSD++LFGAR VYKN FD + +V Y DI
Sbjct: 879 EAQCAYMEMTNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYLMKDI 928
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW+ Q + D G + +AHL+G RICKLLF + +PVFVFDG P LK++
Sbjct: 27 LAVDASIWMVQFMRAMRDDKGDMIRDAHLLGFLRRICKLLFLRARPVFVFDGATPALKRR 86
Query: 209 TI 210
T+
Sbjct: 87 TL 88
>gi|255552654|ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis]
gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3, putative [Ricinus communis]
Length = 1641
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 72/104 (69%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
++ I L ++R L E+ K R A +++ +M E QELLQ+FG+P+I+AP EAEAQCA
Sbjct: 935 QEEILILGQERMNLGSEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY 994
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
+EL N GV+TDDSD++LFGAR VYKN FD + +V Y DI
Sbjct: 995 MELANLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYFMKDI 1038
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 11/93 (11%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW+ Q K + G V NAHL+G + RICKLL+ + KPVFVFDG P LK++
Sbjct: 27 LAIDASIWIVQFMKAMRNEKGEMVRNAHLLGFFRRICKLLYLRTKPVFVFDGATPALKRR 86
Query: 209 TI-----------STLEKDRDQLLLERGKQTRL 230
T+ + + K ++LLL K RL
Sbjct: 87 TVIARRRQRESAQAKIRKTAEKLLLNHLKSMRL 119
>gi|294459945|ref|NP_001170894.1| DNA repair protein complementing XP-G cells [Taeniopygia guttata]
Length = 1176
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 70/99 (70%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
L ++ L ++ +Q R+A+++T QM E+QELL+LFG+P+I AP EAEAQCA L+L +
Sbjct: 749 LSAEQKTLQSQKQQQERVAASVTGQMFLESQELLRLFGIPYIEAPTEAEAQCALLDLTDQ 808
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
T G ITDDSD+WLFG R VYKNFF + ++ Y D +
Sbjct: 809 TSGTITDDSDVWLFGGRHVYKNFFSQNKYIEYYQYVDFQ 847
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G SV NAHL+ L+HR+CKLLFF+I+PVFVFDG P LK+Q
Sbjct: 27 LAVDISIWLNQAIKGARDRGGISVRNAHLLTLFHRLCKLLFFRIRPVFVFDGEAPLLKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQT 228
T++ + R ++ + ++T
Sbjct: 87 TLAK-RRQRKEIAINDSRKT 105
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 18/127 (14%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREV--DMFEL 56
A+R+ K A +++ K LLK LL++ ++ + GK+ ALP V RE DM+ L
Sbjct: 89 AKRRQRKEIAINDSRKTAEKLLKTLLKRHVIKTAITGKSNEALPSITQVQREGIDDMYVL 148
Query: 57 PPAPAQTVQDEEEDSDSDDTEAKFRYA-----------DLHSVDINSEQFSALPPDMRHE 105
P A +++ + ++ E + R + + +SVDI SE F LPP+++HE
Sbjct: 149 P---ALEDEEKNSSEEEEEKEWQMRMSQKQMLQEQLCENPYSVDIESEDFHKLPPEIKHE 205
Query: 106 ILTELLE 112
ILT++ E
Sbjct: 206 ILTDIKE 212
>gi|326663749|ref|XP_003197653.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Danio rerio]
Length = 1022
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 62/79 (78%)
Query: 233 TITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVY 292
T+T QM +E+QELL+LFGVPFIVAP EAEAQCA+L+ + T G ITDDSDIWLFG R VY
Sbjct: 653 TVTGQMCQESQELLRLFGVPFIVAPMEAEAQCAALDRLDQTHGTITDDSDIWLFGGRHVY 712
Query: 293 KNFFDKKSHVLRYTAPDIR 311
+NFF++ +V Y D++
Sbjct: 713 RNFFNQNKYVEHYQIVDMQ 731
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 53/71 (74%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G +V NAHL+ L+HR+CKLLFF+I+PVFV+DG P LKKQ
Sbjct: 27 LAVDISIWLNQAVKGVRDRDGNAVQNAHLLTLFHRLCKLLFFRIRPVFVYDGDAPLLKKQ 86
Query: 209 TISTLEKDRDQ 219
T++ + R++
Sbjct: 87 TLAVRRQRREE 97
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 19/138 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPP--SVSREV--DMFEL 56
A R+ + + + + LL+ L++Q + LG+N P SV R+ D++ L
Sbjct: 89 AVRRQRREETNRESRQTSEKLLQTFLKRQAIRAALGENSQESAPSLSSVRRDEHDDIYVL 148
Query: 57 PPAPAQTVQDE---EEDSDSDDTEAKFRYADLH--------SVDINSEQFSALPPDMRHE 105
P P + + E EE+ D D EA Y+ +VDINSEQFS +PP+++HE
Sbjct: 149 PALPPEDDRQESSSEEEKDGD--EALHNYSRFQEELCDNPDAVDINSEQFSLMPPEIKHE 206
Query: 106 ILTELLE--QRKLSSWHK 121
IL E+ E +R+ + HK
Sbjct: 207 ILKEMKEFSKRRRTLLHK 224
>gi|222624409|gb|EEE58541.1| hypothetical protein OsJ_09837 [Oryza sativa Japonica Group]
Length = 1494
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 97/165 (58%), Gaps = 18/165 (10%)
Query: 143 NKLLVD-LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKP-VFVFDG 200
N LL+D L+ D ++ + + T DL+ ++ + K+ V ++
Sbjct: 782 NDLLMDELVPDTAVQKENMIQRTTDLS---------------TSEINYTKLNDNVGIYSV 826
Query: 201 GVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEA 260
L+K+ +S L ++++ L ER K A +++ +M E QELLQ+FG+P+I+AP EA
Sbjct: 827 SASNLEKE-LSLLRQEQEYLGNERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPMEA 885
Query: 261 EAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
EAQCA +E+ N GV+TDDSD++LFGAR VYKN FD + +V Y
Sbjct: 886 EAQCAYMEMTNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETY 930
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW+ Q + D G + +AHL+G RICKLLF + +PVFVFDG P LK++
Sbjct: 27 LAVDASIWMVQFMRAMRDDKGDMIRDAHLLGFLRRICKLLFLRARPVFVFDGATPALKRR 86
Query: 209 TI 210
T+
Sbjct: 87 TL 88
>gi|108706747|gb|ABF94542.1| XPG I-region family protein, expressed [Oryza sativa Japonica
Group]
Length = 1477
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 97/165 (58%), Gaps = 18/165 (10%)
Query: 143 NKLLVD-LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKP-VFVFDG 200
N LL+D L+ D ++ + + T DL+ ++ + K+ V ++
Sbjct: 775 NDLLMDELVPDTAVQKENMIQRTTDLS---------------TSEINYTKLNDNVGIYSV 819
Query: 201 GVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEA 260
L+K+ +S L ++++ L ER K A +++ +M E QELLQ+FG+P+I+AP EA
Sbjct: 820 SASNLEKE-LSLLRQEQEYLGNERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPMEA 878
Query: 261 EAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
EAQCA +E+ N GV+TDDSD++LFGAR VYKN FD + +V Y
Sbjct: 879 EAQCAYMEMTNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETY 923
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW+ Q + D G + +AHL+G RICKLLF + +PVFVFDG P LK++
Sbjct: 27 LAVDASIWMVQFMRAMRDDKGDMIRDAHLLGFLRRICKLLFLRARPVFVFDGATPALKRR 86
Query: 209 TI 210
T+
Sbjct: 87 TL 88
>gi|218192294|gb|EEC74721.1| hypothetical protein OsI_10446 [Oryza sativa Indica Group]
Length = 1487
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 97/165 (58%), Gaps = 18/165 (10%)
Query: 143 NKLLVD-LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKP-VFVFDG 200
N LL+D L+ D ++ + + T DL+ ++ + K+ V ++
Sbjct: 775 NDLLMDELVPDTAVQKENMIQRTTDLS---------------TSEINYTKLNDNVGIYSV 819
Query: 201 GVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEA 260
L+K+ +S L ++++ L ER K A +++ +M E QELLQ+FG+P+I+AP EA
Sbjct: 820 SASNLEKE-LSLLRQEQEYLGNERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPMEA 878
Query: 261 EAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
EAQCA +E+ N GV+TDDSD++LFGAR VYKN FD + +V Y
Sbjct: 879 EAQCAYMEMTNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETY 923
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW+ Q + D G + +AHL+G RICKLLF + +PVFVFDG P LK++
Sbjct: 27 LAVDASIWMVQFMRAMRDDKGDMIRDAHLLGFLRRICKLLFLRARPVFVFDGATPALKRR 86
Query: 209 TI 210
T+
Sbjct: 87 TL 88
>gi|357113521|ref|XP_003558551.1| PREDICTED: uncharacterized protein LOC100824635 [Brachypodium
distachyon]
Length = 1460
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 72/104 (69%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
++ IS L +++ L ER K A +++ +M E QELLQ+FG+P+I+AP EAEAQCA
Sbjct: 837 EEEISFLRQEQVNLGNERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY 896
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
+E+ N GV+TDDSD++LFGAR VYKN FD + +V Y DI
Sbjct: 897 MEINNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYFMKDI 940
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW+ Q + D G V +AH++G RICKLLF + +PVFVFDG P LK++
Sbjct: 27 LAVDASIWMVQFMRAMRDDKGDMVRDAHILGFLRRICKLLFLRARPVFVFDGATPALKRR 86
Query: 209 TISTLEKDRD 218
T+++ + RD
Sbjct: 87 TLASRRRHRD 96
>gi|225452522|ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
Length = 1513
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 65/88 (73%)
Query: 223 ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
E+ K R A ++ +M E QELLQ+FG+P+I+AP EAEAQCA +EL N GV+TDDSD
Sbjct: 823 EQRKLERNADCVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 882
Query: 283 IWLFGARTVYKNFFDKKSHVLRYTAPDI 310
++LFGAR+VYKN FD++ +V Y DI
Sbjct: 883 VFLFGARSVYKNIFDERKYVETYFMKDI 910
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 44/70 (62%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW+ Q K D G V N HL+G + RICKLLF + KPVFVFDGG P LK++
Sbjct: 27 LAIDASIWMIQFMKAMRDEKGEMVRNGHLLGFFRRICKLLFLRTKPVFVFDGGTPALKRR 86
Query: 209 TISTLEKDRD 218
T+ + R+
Sbjct: 87 TVVARRRQRE 96
>gi|296087697|emb|CBI34953.3| unnamed protein product [Vitis vinifera]
Length = 1449
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 65/88 (73%)
Query: 223 ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
E+ K R A ++ +M E QELLQ+FG+P+I+AP EAEAQCA +EL N GV+TDDSD
Sbjct: 783 EQRKLERNADCVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 842
Query: 283 IWLFGARTVYKNFFDKKSHVLRYTAPDI 310
++LFGAR+VYKN FD++ +V Y DI
Sbjct: 843 VFLFGARSVYKNIFDERKYVETYFMKDI 870
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 44/70 (62%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW+ Q K D G V N HL+G + RICKLLF + KPVFVFDGG P LK++
Sbjct: 27 LAIDASIWMIQFMKAMRDEKGEMVRNGHLLGFFRRICKLLFLRTKPVFVFDGGTPALKRR 86
Query: 209 TISTLEKDRD 218
T+ + R+
Sbjct: 87 TVVARRRQRE 96
>gi|326527491|dbj|BAK08020.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1503
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 70/101 (69%)
Query: 210 ISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
IS L +++ L ER K A +++ +M E QELLQ+FG+P+I+AP EAEAQCA +E+
Sbjct: 847 ISFLRQEQVDLGNERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEI 906
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
N GV+TDDSD++LFGAR VYKN FD + +V Y DI
Sbjct: 907 NNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYLMKDI 947
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW+ Q + D G V +AH++G RICKLLF + +PVFVFDG P LK++
Sbjct: 27 LAVDASIWMVQFMRAMRDDKGDMVRDAHILGFLRRICKLLFLRARPVFVFDGATPALKRR 86
Query: 209 TI 210
T+
Sbjct: 87 TL 88
>gi|242041837|ref|XP_002468313.1| hypothetical protein SORBIDRAFT_01g043560 [Sorghum bicolor]
gi|241922167|gb|EER95311.1| hypothetical protein SORBIDRAFT_01g043560 [Sorghum bicolor]
Length = 1489
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 70/101 (69%)
Query: 210 ISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
+S L +++ L ER K A +++ +M E QELLQ+FG+P+I+AP EAEAQCA +E+
Sbjct: 841 LSRLRQEQIDLGHERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPTEAEAQCAYMEI 900
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
N GV+TDDSD++LFGAR VYKN FD + +V Y DI
Sbjct: 901 NNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYFMKDI 941
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
D SIW+ Q + D +G V +AHL+G RICKLLF +++PVFVFDG P LK++T+
Sbjct: 30 DASIWMVQFMRAMRDDSGEMVRDAHLLGFLRRICKLLFLRVRPVFVFDGATPALKRRTL 88
>gi|414865352|tpg|DAA43909.1| TPA: hypothetical protein ZEAMMB73_723390 [Zea mays]
Length = 1531
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 70/101 (69%)
Query: 210 ISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
+S L +++ L ER K A +++ +M E QELLQ+FG+P+I+AP EAEAQCA +E+
Sbjct: 888 LSRLRQEQIYLGHERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEI 947
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
N GV+TDDSD++LFGAR VYKN FD + +V Y DI
Sbjct: 948 NNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYFMKDI 988
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
D SIW+ Q + D +G V +AHL+G RICKLLF +++PVFVFDG P LK++T+
Sbjct: 30 DASIWMVQFMRAMRDDSGEMVRDAHLLGFLRRICKLLFLRVRPVFVFDGATPALKRRTL 88
>gi|321470911|gb|EFX81885.1| hypothetical protein DAPPUDRAFT_49689 [Daphnia pulex]
Length = 257
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 54/70 (77%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L DVSIWLHQ TKG D G +PNAHL+GL HR+CKLLFFKIKPVFVFDGGVP LK+Q
Sbjct: 27 LAVDVSIWLHQATKGFRDAQGNPLPNAHLLGLCHRLCKLLFFKIKPVFVFDGGVPVLKRQ 86
Query: 209 TISTLEKDRD 218
T++ RD
Sbjct: 87 TMAARHNRRD 96
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 11/138 (7%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPPSVSR---EVDMFELP 57
A R + A N D V +L N ++ +++N LGKN+ P + + E D+FELP
Sbjct: 89 AARHNRRDTAVKNNDMVAEKILSNYIKSEVINKQLGKNKGKSGAPLLKKKKLEPDLFELP 148
Query: 58 PAPAQTVQDEEEDSDSDD--------TEAKFRYADLHSVDINSEQFSALPPDMRHEILTE 109
P P Q ++ +SD DD + ++HSVD+ SE F ALP +++HEIL E
Sbjct: 149 PIPNQNTEEVSSESDFDDDANGNLGAISLHMKGHNIHSVDVTSEAFLALPTEIQHEILLE 208
Query: 110 LLEQRKLSSWHKMHEMPQ 127
L + RK SSW+++H+MPQ
Sbjct: 209 LRDTRKQSSWNRIHQMPQ 226
>gi|242000896|ref|XP_002435091.1| DNA-repair protein xp-G, putative [Ixodes scapularis]
gi|215498421|gb|EEC07915.1| DNA-repair protein xp-G, putative [Ixodes scapularis]
Length = 868
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+S+WLHQ KG D GG NAHL+ L+HR CKLLF+ +KPVFVFDGGVPQLKKQ
Sbjct: 27 LAVDISMWLHQALKGMRDSEGGPAANAHLVALFHRACKLLFYGVKPVFVFDGGVPQLKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRL 230
T++ + R +L + ++ RL
Sbjct: 87 TLAARHQRRAAMLADAQRKARL 108
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 226 KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWL 285
KQ R A+++++Q+ E QELL++FG+PF+V+PGEAEAQCA LE TQG +TDDSD WL
Sbjct: 632 KQQRQATSMSDQLVMECQELLRMFGLPFVVSPGEAEAQCAWLEEQGLTQGTVTDDSDAWL 691
Query: 286 FGARTVYKNFF--DKKSHVLR 304
FGARTVY++ F D++ V R
Sbjct: 692 FGARTVYRHLFASDRRPSVYR 712
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 50 EVDMFELPPAPAQTVQ------DEEEDSDSDDTEAKFRYA--DLHSVDINSEQFSALPPD 101
E D++ LPP P + E+ED + + + +L +D +SE+F LP +
Sbjct: 127 EADIYALPPLPPHCAEFAVSSCSEQEDEELSWSRPGIGLSTRELSLMDFDSEEFEELPAE 186
Query: 102 MRHEILTELLEQRKLSSWHKMHEMPQNDQ 130
+RHE L + Q++ W + ++P++ +
Sbjct: 187 LRHEALRAMQHQQR---WGRKKQLPKDSE 212
>gi|11994123|dbj|BAB01125.1| unnamed protein product [Arabidopsis thaliana]
Length = 1522
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 72/104 (69%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
++ I L+++ L E+ K R A +++ +M E QELLQ+FG+P+I+AP EAEAQCA
Sbjct: 934 EEEIRVLDQEFVSLGDEQRKLERNAESVSSEMFAECQELLQIFGIPYIIAPMEAEAQCAF 993
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
+E N G++TDDSD++LFGAR+VYKN FD + +V Y DI
Sbjct: 994 MEQSNLVDGIVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDI 1037
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 11/91 (12%)
Query: 151 SDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
+D SIW+ Q K D G V NAHLIG + RICKLLF + KP+FVFDG P LK++T+
Sbjct: 55 ADASIWMVQFIKAMRDEKGDMVQNAHLIGFFRRICKLLFLRTKPIFVFDGATPALKRRTV 114
Query: 211 -----------STLEKDRDQLLLERGKQTRL 230
+ + K ++LLL R K RL
Sbjct: 115 IARRRQRENAQTKIRKTAEKLLLNRLKDIRL 145
>gi|18405624|ref|NP_566830.1| DNA repair protein UVH3 [Arabidopsis thaliana]
gi|56749787|sp|Q9ATY5.1|UVH3_ARATH RecName: Full=DNA repair protein UVH3; AltName: Full=ERCC5 homolog;
AltName: Full=RAD2 homolog; Short=AtRAD2; Short=AtUVH3;
Short=AtXPG; AltName: Full=UV hypersensitive protein 3;
AltName: Full=XPG homolog
gi|13649704|gb|AAK37472.1| UV hypersensitive protein [Arabidopsis thaliana]
gi|332643872|gb|AEE77393.1| DNA repair protein UVH3 [Arabidopsis thaliana]
Length = 1479
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 72/104 (69%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
++ I L+++ L E+ K R A +++ +M E QELLQ+FG+P+I+AP EAEAQCA
Sbjct: 894 EEEIRVLDQEFVSLGDEQRKLERNAESVSSEMFAECQELLQIFGIPYIIAPMEAEAQCAF 953
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
+E N G++TDDSD++LFGAR+VYKN FD + +V Y DI
Sbjct: 954 MEQSNLVDGIVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDI 997
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 11/93 (11%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW+ Q K D G V NAHLIG + RICKLLF + KP+FVFDG P LK++
Sbjct: 27 LAIDASIWMVQFIKAMRDEKGDMVQNAHLIGFFRRICKLLFLRTKPIFVFDGATPALKRR 86
Query: 209 TI-----------STLEKDRDQLLLERGKQTRL 230
T+ + + K ++LLL R K RL
Sbjct: 87 TVIARRRQRENAQTKIRKTAEKLLLNRLKDIRL 119
>gi|195559286|ref|XP_002077347.1| GD20054 [Drosophila simulans]
gi|194202449|gb|EDX16025.1| GD20054 [Drosophila simulans]
Length = 259
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 61/85 (71%)
Query: 230 LASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGAR 289
+ +I+++MS + QE L+LFG+P+IVAP EAEAQCA L + T G ITDDSDIWLFG R
Sbjct: 1 MGMSISQRMSIDCQEQLRLFGIPYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGGR 60
Query: 290 TVYKNFFDKKSHVLRYTAPDIRYYF 314
TVYKNFF + HV+ + A I F
Sbjct: 61 TVYKNFFAQNKHVMEFRAEQIEQTF 85
>gi|297815070|ref|XP_002875418.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321256|gb|EFH51677.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1463
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 72/104 (69%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
++ I L+++ L E+ K R A +++ +M E QELLQ+FG+P+I+AP EAEAQCA
Sbjct: 889 EEEIRVLDQEFVSLGDEQRKLERNAESVSSEMFAECQELLQIFGIPYIIAPMEAEAQCAF 948
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
+E N G++TDDSD++LFGAR+VYKN FD + +V Y DI
Sbjct: 949 MEQSNLVDGIVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDI 992
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 11/93 (11%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW+ Q K D G V NAHLIG + RICKLLF + KP+FVFDG P LK++
Sbjct: 27 LAIDASIWMVQFIKAMRDENGDMVQNAHLIGFFRRICKLLFLRTKPIFVFDGATPALKRR 86
Query: 209 TI-----------STLEKDRDQLLLERGKQTRL 230
T+ + + K ++LLL R K RL
Sbjct: 87 TVIARRRQRENAQTKIRKTAEKLLLNRLKDIRL 119
>gi|5689765|emb|CAB52135.1| Nucleotide excision repair protein [Drosophila melanogaster]
Length = 378
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 56/77 (72%)
Query: 238 MSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFD 297
MS + QELL+LFG+P+IVAP EAEAQCA L + T G ITDDSDIWLFG RTVYKNFF
Sbjct: 1 MSIDCQELLRLFGIPYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGGRTVYKNFFA 60
Query: 298 KKSHVLRYTAPDIRYYF 314
+ HV+ + A I F
Sbjct: 61 QNKHVMEFRAEQIEQTF 77
>gi|308810128|ref|XP_003082373.1| 5'-3' exonuclease (ISS) [Ostreococcus tauri]
gi|116060841|emb|CAL57319.1| 5'-3' exonuclease (ISS), partial [Ostreococcus tauri]
Length = 987
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 70/105 (66%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
++ I +E++R L LE + T+ A +T++M R+ QELL LFG+P+I+AP EAEAQCA
Sbjct: 592 EKMIREVEEERQMLELEHRQATKAAEQVTDEMYRDVQELLTLFGIPYIIAPQEAEAQCAY 651
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
L VITDDSD++LFGA VY+NFF K + Y+A IR
Sbjct: 652 LNEQKLVDAVITDDSDVFLFGASLVYRNFFQDKKYCEVYSADRIR 696
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 179 GLYHRICKLLFFKIKPVFVFDGGVPQLK 206
G + RI +LL I PVFVFDG P LK
Sbjct: 12 GFFRRIARLLHHGITPVFVFDGAAPGLK 39
>gi|198423155|ref|XP_002121987.1| PREDICTED: similar to Excision repair cross-complementing rodent
repair deficiency, complementation group 5 [Ciona
intestinalis]
Length = 948
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 76/111 (68%), Gaps = 4/111 (3%)
Query: 205 LKKQTISTLEKD---RDQLLLERGKQ-TRLASTITEQMSREAQELLQLFGVPFIVAPGEA 260
++K+ I+ LE+ D LLER K +R A +++ + E QELL+LFG+PF+++P EA
Sbjct: 586 MQKEDINELEEKLDAEDAALLERIKSASRAAREVSDVATMECQELLRLFGIPFVLSPQEA 645
Query: 261 EAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
EAQCA L++ + T G IT+DSD+WLFG + VYK+ FD+K Y+ DI+
Sbjct: 646 EAQCAFLDMNDLTMGTITEDSDVWLFGGKNVYKDMFDRKRDPTCYSLLDIQ 696
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+ KG + G S NAHLI L+HRICKLL+F IKPVFVFDGG P LK++
Sbjct: 27 LAVDISIWLNMAIKG---MRGQSANNAHLITLFHRICKLLYFGIKPVFVFDGGAPALKQR 83
Query: 209 TISTLEKDRD 218
T+ + +D
Sbjct: 84 TLKERRQKKD 93
>gi|395833265|ref|XP_003789660.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein complementing XP-G
cells [Otolemur garnettii]
Length = 1650
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 63/90 (70%)
Query: 216 DRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQG 275
+++ L ++ +Q R+A+T+ ELL+LFG+P++ AP EAEAQCA L+L + T G
Sbjct: 1211 EQNSLKAQQQQQERVAATVXXXXXXXPXELLRLFGIPYVQAPMEAEAQCAILDLTDQTSG 1270
Query: 276 VITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
ITDDSDIWLFGAR VYKNFF+K V Y
Sbjct: 1271 TITDDSDIWLFGARHVYKNFFNKNKFVEYY 1300
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 50/62 (80%)
Query: 150 ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT 209
+S++SIWL+Q KG D G ++ NAHL+ L+HR+CKLLFF+I+PVFVFDG P LKKQT
Sbjct: 481 MSNISIWLNQALKGVRDHHGNTIENAHLLTLFHRLCKLLFFRIRPVFVFDGDAPLLKKQT 540
Query: 210 IS 211
++
Sbjct: 541 LA 542
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 69/124 (55%), Gaps = 14/124 (11%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPPS---VSREVDMFELP 57
A+R+ K A+S++ K LLK L++Q + +++ A P PS V RE D++ LP
Sbjct: 542 AKRRLRKDSASSDSRKTTEKLLKTFLKRQAIKTAF-RSKRAEPLPSLTQVRREDDIYALP 600
Query: 58 PAPAQTVQDEEEDSDSDDT---------EAKFRYADLHSVDINSEQFSALPPDMRHEILT 108
P + EE+ + + + +F + + +VDI SE FS+LPP+++HEIL+
Sbjct: 601 PLQEEEKHSSEEEDEKEWQERMNQKQALQEEF-FQNPQAVDIESEDFSSLPPEIKHEILS 659
Query: 109 ELLE 112
++ E
Sbjct: 660 DMKE 663
>gi|5805306|gb|AAD51936.1|AF162795_1 mutant nucleotide excision repair protein mus201 [Drosophila
melanogaster]
Length = 725
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 58/72 (80%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+FDG VPQLK+
Sbjct: 27 LAVDISIWLHQVVKGFQDNKGSALSNAHLLGLFHRLCKLLYYRVRPVFIFDGCVPQLKRD 86
Query: 209 TISTLEKDRDQL 220
TI+ ++ R++L
Sbjct: 87 TIARRQQQRNKL 98
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 90/146 (61%), Gaps = 20/146 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMAL--------PPPSVSREVD 52
A+R+ ++K ++ AD++++ LL++L +++++ LGKN L PP + E D
Sbjct: 89 ARRQQQRNKLSNEADRIQALLLQSLAKEKVVQQALGKNAELLLKSPVKRPPPAKKNDEDD 148
Query: 53 MFELPPAPAQTVQDEEEDSDS-----------DDTEAKFRY-ADLHSVDINSEQFSALPP 100
+F+LP PA +VQD +++S+ D++ A+ Y + L ++D+ S+ F LP
Sbjct: 149 LFKLPELPAASVQDNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNLPA 208
Query: 101 DMRHEILTELLEQRKLSSWHKMHEMP 126
D+RHEILT++ E RK SSW ++HE+P
Sbjct: 209 DVRHEILTDIKETRKQSSWGRLHELP 234
>gi|356498232|ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like [Glycine
max]
Length = 1707
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 223 ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
E+ K R A ++ ++ E QELLQ+FG+P+I+AP EAEAQCA LEL GV+TDDSD
Sbjct: 1007 EQRKLERNAESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELEKLVDGVVTDDSD 1066
Query: 283 IWLFGARTVYKNFFDKKSHVLRYTAPDI 310
+ LFGAR+VYKN FD + +V Y DI
Sbjct: 1067 VLLFGARSVYKNIFDDRKYVETYFMEDI 1094
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 45/70 (64%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW+ Q K D G V NAHL+G + RICKLLF + KPVFVFDGG P LK++
Sbjct: 27 LAVDASIWMVQFVKAMRDEKGEMVRNAHLLGFFRRICKLLFLRTKPVFVFDGGTPALKRR 86
Query: 209 TISTLEKDRD 218
T+ + R+
Sbjct: 87 TVIARRRQRE 96
>gi|427797693|gb|JAA64298.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 856
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 52/69 (75%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L DVS+WLHQ KG D G V NAHL+GL R+CKLLF+ +KPVFVFDGGVPQLKKQ
Sbjct: 30 LAVDVSLWLHQAVKGFRDAQGSPVANAHLLGLLQRVCKLLFYGVKPVFVFDGGVPQLKKQ 89
Query: 209 TISTLEKDR 217
T++ ++ R
Sbjct: 90 TLAARQERR 98
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 63/96 (65%)
Query: 219 QLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
+L E +Q R A+++ + + +E QELL L G P++V+PGEAEAQCA LE +QGV+T
Sbjct: 567 ELEQEAARQQRHAASLNDVLVKECQELLALLGQPYVVSPGEAEAQCAWLEQHGLSQGVVT 626
Query: 279 DDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
DDSD WLFGA+ +Y++ F +R+ D+ F
Sbjct: 627 DDSDAWLFGAQCIYRHLFRPDRRPMRFLMKDLASQF 662
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 10/61 (16%)
Query: 52 DMFELPPAPAQ-----TVQDEEEDSDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEI 106
D++ LPP P V+D++ED + D +L S+D +SE+F+ALP +MRH
Sbjct: 132 DLYVLPPLPEHWNKLYKVEDDDEDWHTGDA-----LWELASLDCDSEEFAALPAEMRHRA 186
Query: 107 L 107
L
Sbjct: 187 L 187
>gi|390364842|ref|XP_790336.3| PREDICTED: DNA repair protein complementing XP-G cells-like
[Strongylocentrotus purpuratus]
Length = 375
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 66/98 (67%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
L +R L ER KQ + + +IT+ M +++E+LQ FG+P+I +P EAEAQCA L+L N
Sbjct: 79 LHTERLALEKERRKQQKKSYSITDTMYADSKEMLQCFGIPYIESPQEAEAQCAFLDLTNQ 138
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
T+G ITDD DIWLFG R V+++FF KK + DI
Sbjct: 139 TEGTITDDGDIWLFGGRRVFRHFFSKKKDPEYFRVGDI 176
>gi|390340292|ref|XP_791943.2| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Strongylocentrotus purpuratus]
Length = 1373
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 66/102 (64%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
L +R L ER KQ + + +IT+ M +++E+LQ FG+P+I +P EAEAQCA L+L N
Sbjct: 830 LHTERLALEKERRKQQKKSYSITDTMYADSKEMLQCFGIPYIESPQEAEAQCAFLDLTNQ 889
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
+G ITDD DIWLFG R V+++FF KK + DI +
Sbjct: 890 AEGTITDDGDIWLFGGRRVFRHFFSKKKDPEYFRVGDIERHL 931
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 53/77 (68%), Gaps = 4/77 (5%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
DVSIWL+Q G H G S+ N HL L++RICKLLF++IKP+FVFDG PQLKKQT++
Sbjct: 30 DVSIWLNQAVLGVH---GNSLSNPHLQVLFNRICKLLFYRIKPIFVFDGAPPQLKKQTLA 86
Query: 212 TLEKDRDQLLLERGKQT 228
+ R L R ++T
Sbjct: 87 A-RRQRKNLAAARTEKT 102
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 19/149 (12%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMA----LPPPSVSR--EVDMF 54
A R+ K+ AA+ +K ++KN ++ + V+G+N LPP + R E D++
Sbjct: 86 AARRQRKNLAAARTEKTTERIVKNYMKSHAIQAVIGENGEGTSQDLPPLYIPRKNETDLY 145
Query: 55 ELPPAPAQTVQDEEEDSD-------------SDDTEAKFRYADLHSVDINSEQFSALPPD 101
ELPP P+ + + S+ + E + RY DL +DI SE F ALP +
Sbjct: 146 ELPPLPSNDLHENNSGSEDEEEEDHISIAMAAHQAEMESRYQDLGELDIESESFKALPVE 205
Query: 102 MRHEILTELLEQRKLSSWHKMHEMPQNDQ 130
++HE++TEL E K +SW +MH++P+ Q
Sbjct: 206 VQHELITELQESSKKNSWARMHQLPKVSQ 234
>gi|195155664|ref|XP_002018721.1| GL25949 [Drosophila persimilis]
gi|194114874|gb|EDW36917.1| GL25949 [Drosophila persimilis]
Length = 576
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G ++ NAHL+GL+HR+CKLL+++++PVF+FDG PQLK+
Sbjct: 27 LAVDISIWLHQVVKGFQDNKGSALNNAHLLGLFHRLCKLLYYRVRPVFIFDGCTPQLKRD 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSRE 241
TI+ ++ R++L + R+ + + + ++RE
Sbjct: 87 TIARRQQQRNKL---SNEADRIQALLLQSLARE 116
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 142/298 (47%), Gaps = 49/298 (16%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMAL-------PPPSVSR--EV 51
A+R+ ++K ++ AD++++ LL++L ++++ LGKN L PPPS S+ E
Sbjct: 89 ARRQQQRNKLSNEADRIQALLLQSLAREKVVQQALGKNAELLLKSPVKRPPPSKSKNDED 148
Query: 52 DMFELPPAPAQTV-QDEEEDSDSD---------------DTEAKFRY-ADLHSVDINSEQ 94
D+F+LP PA QD ++SD D ++ A+ Y + L ++D+ S+
Sbjct: 149 DLFKLPELPALAAGQDNPDESDQDLDYTSASATSDSSFDESTARHAYNSSLQAIDVKSQN 208
Query: 95 FSALPPDMRHEILTELLEQRKLSSWHKMHEMPQNDQHSMLEFRCNIVINKLLVDLISDVS 154
F LP D+RHEILT++ E RK SSW ++HE+P +F C+ + +LL S
Sbjct: 209 FKNLPADVRHEILTDIKETRKQSSWGRLHELPARSD----DF-CSFQMKRLLKRRAVQES 263
Query: 155 IWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLE 214
+ + G H L Y +C FF + + V + Q +Q IS+ E
Sbjct: 264 LEQAEQEMGGHTLT------------YSELCD--FFSEEGI-VTPTAIEQSTRQ-ISSDE 307
Query: 215 KDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
R LL+ K+ L ST TE M E E L P ++ ++E+G
Sbjct: 308 HTR-FLLVRDLKKKALESTKTE-MKMETIEELPETKPPVDEEKPSTSSKAETVEMGTE 363
>gi|9930001|dbj|BAB12157.1| hypothetical protein [Macaca fascicularis]
Length = 415
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 54/73 (73%)
Query: 238 MSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFD 297
M E+QELL+LFG+P+I AP EAEAQCA L+L + T G ITDDSDIWLFGAR VYKNFF+
Sbjct: 1 MFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGARHVYKNFFN 60
Query: 298 KKSHVLRYTAPDI 310
K V Y D
Sbjct: 61 KNKFVEYYQYVDF 73
>gi|397513474|ref|XP_003827038.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 1 [Pan paniscus]
gi|397513476|ref|XP_003827039.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 2 [Pan paniscus]
gi|397513478|ref|XP_003827040.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 3 [Pan paniscus]
Length = 908
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T GSV HL L+ RI L +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMMGSVMKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQ--TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
+ R GK + + + + RE +L+ G+P++ A GEAEA CA L
Sbjct: 88 KRNQTR---YGSSGKSWSQKTGRSHFKSVLRECLHMLECLGIPWVQAAGEAEAMCAYLNA 144
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
G H G +T+D D +L+GARTVY+NF K HV YT I+
Sbjct: 145 GGHVDGCLTNDGDTFLYGARTVYRNFTMNTKDPHVDCYTMSSIK 188
>gi|114576279|ref|XP_001136636.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 3 [Pan
troglodytes]
gi|410034836|ref|XP_003949810.1| PREDICTED: flap endonuclease GEN homolog 1 [Pan troglodytes]
gi|410218742|gb|JAA06590.1| Gen homolog 1, endonuclease [Pan troglodytes]
gi|410255580|gb|JAA15757.1| Gen homolog 1, endonuclease [Pan troglodytes]
gi|410287868|gb|JAA22534.1| Gen homolog 1, endonuclease [Pan troglodytes]
gi|410352247|gb|JAA42727.1| Gen homolog 1, endonuclease [Pan troglodytes]
Length = 908
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T GSV HL L+ RI L +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMMGSVMKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQ--TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
+ R GK + + + + RE +L+ G+P++ A GEAEA CA L
Sbjct: 88 KRNQTR---YGSSGKSWSQKTGRSHFKSVLRECLHMLECLGIPWVQAAGEAEAMCAYLNA 144
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
G H G +T+D D +L+GARTVY+NF K HV YT I+
Sbjct: 145 GGHVDGCLTNDGDTFLYGARTVYRNFTMNTKDPHVDCYTMSSIK 188
>gi|332253767|ref|XP_003276003.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 1 [Nomascus
leucogenys]
gi|332253769|ref|XP_003276004.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 2 [Nomascus
leucogenys]
Length = 907
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + + GSV HL L+ RI L +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQSVKKMM--GSVMKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
+ R + Q S T + RE +L+ G+P++ A GEAEA CA L G
Sbjct: 88 KRNQTRYGSSGKSWSQKTGRSHFTSVL-RECLHMLECLGIPWVQAAGEAEAMCAYLNAGG 146
Query: 272 HTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
H G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 147 HVNGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVDCYTMSSIK 188
>gi|432096863|gb|ELK27441.1| Flap endonuclease GEN like protein 1 [Myotis davidii]
Length = 903
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G+V HL L+ RI L +K VFV +G P+LK I+
Sbjct: 30 DLSLWVCE--SQTVKKMIGTVTKPHLRNLFFRISHLTLMDVKLVFVMEGEPPKLKADVIN 87
Query: 212 TLEKDRDQLLLERGKQT---RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
R+Q+ +T + + + + RE ELL+ G+P++ A GEAEA C+ L+
Sbjct: 88 ----KRNQIRYGPSGKTWSQKTGRSHFKSVLRECLELLECLGIPWVQAAGEAEAMCSYLD 143
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
+ G +T+D D +L+GARTVY+NF K HV YTA I+
Sbjct: 144 ASGYVDGCLTNDGDAFLYGARTVYRNFTMNTKDPHVDCYTASSIK 188
>gi|431911852|gb|ELK13996.1| Flap endonuclease GEN like protein 1 [Pteropus alecto]
Length = 903
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 86/164 (52%), Gaps = 11/164 (6%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + + G+V HL L+ RI L +K VFV +G P+LK I+
Sbjct: 30 DLSLWVCEAQSVKKMI--GTVKKPHLRNLFFRISYLTLMDVKLVFVMEGEPPELKADVIN 87
Query: 212 TLEKDRDQLLLERGKQTRLAST---ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
R+Q+ ++TR T + + RE ELL G+P++ A GEAEA CA L
Sbjct: 88 ----KRNQIRYGPSEKTRSQKTGRSYFKSVLRECLELLDCIGIPWVQAAGEAEAMCAYLN 143
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNF--FDKKSHVLRYTAPDI 310
+ G +TDD D +L+GA+TVY+NF K HV YT I
Sbjct: 144 ASGYVDGCLTDDGDTFLYGAQTVYRNFAMTSKDPHVDCYTMSSI 187
>gi|312285668|gb|ADQ64524.1| hypothetical protein [Bactrocera oleae]
Length = 232
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 70/103 (67%), Gaps = 4/103 (3%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ KG D G +P+AHL+GL+HR+CKLL+++I+PVFVFDG VPQLK+
Sbjct: 27 LAIDISIWLHQVIKGFQDSKGSLLPHAHLLGLFHRLCKLLYYRIRPVFVFDGLVPQLKRD 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGV 251
TI+ R ++ + R+ + + E +++E + + Q GV
Sbjct: 87 TIARRHHQRVKI---NNEANRIQALLLESLAKE-KVVQQALGV 125
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 77/144 (53%), Gaps = 25/144 (17%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPPSVSREV--------D 52
A+R + K + A+++++ LL++L +++++ LG N L R++ D
Sbjct: 89 ARRHHQRVKINNEANRIQALLLESLAKEKVVQQALGVNAQLLMKSPNKRKISHNENEKDD 148
Query: 53 MFELPP--APAQTVQDEE--------------EDSDSDDTEAKFRY-ADLHSVDINSEQF 95
+F+LP A ++ +D+E +S DD+ Y A++ ++D+ SE F
Sbjct: 149 IFKLPDLHAEKESKKDQEYTDSSLSYYSEVSEAESSIDDSNPWREYNANIQAIDVRSEHF 208
Query: 96 SALPPDMRHEILTELLEQRKLSSW 119
+LPP++RHEIL ++ + RK SSW
Sbjct: 209 KSLPPEVRHEILVDIKDTRKQSSW 232
>gi|326916541|ref|XP_003204565.1| PREDICTED: flap endonuclease GEN homolog 1-like, partial [Meleagris
gallopavo]
Length = 897
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 87/165 (52%), Gaps = 5/165 (3%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+S+W+ + T G V HL L+ R IK VFV +G P+LK
Sbjct: 27 LAVDLSLWVCEAQ--TVKKMIGVVTKPHLRNLFFRYSFFTSMGIKLVFVMEGEAPKLKAD 84
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
T+S + R + G R ++ + + +E +LL+ GVP++ A GEAEA CA L
Sbjct: 85 TMSKRNEMRYGASNKHGA-ARTGRSLFKSILKECLQLLECLGVPWVQAAGEAEAMCAYLN 143
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
H G IT+D D++L+GA+TVY+NF K+ H+ YT I+
Sbjct: 144 AKGHVDGCITNDGDVFLYGAQTVYRNFAMNSKEPHLDCYTMSSIK 188
>gi|194018531|ref|NP_872431.3| flap endonuclease GEN homolog 1 [Homo sapiens]
gi|194018535|ref|NP_001123481.1| flap endonuclease GEN homolog 1 [Homo sapiens]
gi|290457644|sp|Q17RS7.2|GEN_HUMAN RecName: Full=Flap endonuclease GEN homolog 1
Length = 908
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T GSV HL L+ RI L +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMMGSVMKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQ--TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
+ R GK + + + + RE +L+ G+P++ A GEAEA CA L
Sbjct: 88 KRNQSR---YGSSGKSWSQKTGRSHFKSVLRECLHMLECLGIPWVQAAGEAEAMCAYLNA 144
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
G H G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 145 GGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVDCYTMSSIK 188
>gi|402588539|gb|EJW82472.1| XPG domain-containing protein [Wuchereria bancrofti]
Length = 604
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%)
Query: 230 LASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGAR 289
AST E + ++ Q LL++ G+PF++APGEAEAQC LE QG+I+DDSD+WLFGA
Sbjct: 462 FASTREEGVYKDCQNLLRICGIPFVIAPGEAEAQCCELEKLGLVQGIISDDSDVWLFGAA 521
Query: 290 TVYKNFFDKKSHVLRYTAPDIR 311
VYKN F++K + Y+ IR
Sbjct: 522 VVYKNMFNQKRRLQMYSMESIR 543
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
Query: 149 LISDVSIWLHQLTKG--THDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDG-GVPQL 205
L D+SIWLHQ G H L + HL + R+ KLLF+KI+P+FVFDG VP
Sbjct: 32 LAIDISIWLHQAAYGYSEHQL---NAKYPHLSLVLRRLAKLLFYKIRPIFVFDGPNVPIF 88
Query: 206 KKQTISTLEKDR--DQLLLERGKQ---TRLASTITEQMSREAQELLQLFG 250
KK+ + + R ++L + + ++ +LAS+ ++ EL ++F
Sbjct: 89 KKKLLRDRQVKRYVEELTMTKAQKHVLQQLASSQLHGGEQQVDELSEVFA 138
>gi|355751124|gb|EHH55379.1| hypothetical protein EGM_04579 [Macaca fascicularis]
Length = 907
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 86/164 (52%), Gaps = 9/164 (5%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T GSV HL L+ RI L +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMMGSVVKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQ--TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
+ R GK + + + + RE ++L+ G+P++ A GEAEA CA L
Sbjct: 88 KRNQTR---YGSSGKSWSQKTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAYLNA 144
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
G H G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 145 GGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVDCYTMSTIK 188
>gi|383418083|gb|AFH32255.1| flap endonuclease GEN homolog 1 [Macaca mulatta]
gi|383418085|gb|AFH32256.1| flap endonuclease GEN homolog 1 [Macaca mulatta]
Length = 907
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 86/164 (52%), Gaps = 9/164 (5%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T GSV HL L+ RI L +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMMGSVVKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQ--TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
+ R GK + + + + RE ++L+ G+P++ A GEAEA CA L
Sbjct: 88 KRNQTR---YGSSGKSWSQKTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAYLNA 144
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
G H G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 145 GGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVDCYTMSTIK 188
>gi|355565476|gb|EHH21905.1| hypothetical protein EGK_05073 [Macaca mulatta]
Length = 907
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 86/164 (52%), Gaps = 9/164 (5%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T GSV HL L+ RI L +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMMGSVVKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQ--TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
+ R GK + + + + RE ++L+ G+P++ A GEAEA CA L
Sbjct: 88 KRNQTR---YGSSGKSWSQKTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAYLNA 144
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
G H G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 145 GGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVDCYTMSTIK 188
>gi|109102065|ref|XP_001092423.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 2 [Macaca
mulatta]
gi|109102069|ref|XP_001092651.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 4 [Macaca
mulatta]
Length = 907
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 86/164 (52%), Gaps = 9/164 (5%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T GSV HL L+ RI L +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMMGSVVKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQ--TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
+ R GK + + + + RE ++L+ G+P++ A GEAEA CA L
Sbjct: 88 KRNQTR---YGSSGKSWSQKTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAYLNA 144
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
G H G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 145 GGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVDCYTMSTIK 188
>gi|324501186|gb|ADY40530.1| DNA repair protein RAD2 [Ascaris suum]
Length = 947
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 56/75 (74%)
Query: 236 EQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
E + +E QELL+L G+PF+V+PGEAEAQC LE QG+++DDSD+WLFGA TVYKN
Sbjct: 493 EGVYKECQELLRLCGIPFVVSPGEAEAQCCELERLGLVQGIVSDDSDVWLFGASTVYKNM 552
Query: 296 FDKKSHVLRYTAPDI 310
F++K V +++ I
Sbjct: 553 FNQKRRVQMFSSETI 567
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDG-GVPQLKKQTI 210
DVS+WL+Q G + L HL L R+ KLLF+KI+PVFVFDG VP K++ +
Sbjct: 30 DVSLWLYQAIYG-YGLYQQETRCPHLSLLLSRLSKLLFYKIRPVFVFDGPNVPLFKRKIL 88
>gi|402890148|ref|XP_003908353.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 1 [Papio anubis]
gi|402890150|ref|XP_003908354.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 2 [Papio anubis]
gi|402890152|ref|XP_003908355.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 3 [Papio anubis]
Length = 906
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 86/164 (52%), Gaps = 9/164 (5%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T GSV HL L+ RI L +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMMGSVVKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQ--TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
+ R GK + + + + RE ++L+ G+P++ A GEAEA CA L
Sbjct: 88 KRNQTR---YGSSGKSWSQKTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAYLNA 144
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
G H G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 145 GGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVDCYTMSTIK 188
>gi|395828598|ref|XP_003787457.1| PREDICTED: flap endonuclease GEN homolog 1 [Otolemur garnettii]
Length = 884
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G+V HL L+ RI L+ +K VFV +G P+LK +
Sbjct: 30 DLSLWVCEAQ--TVKKMIGTVMKPHLRNLFFRISYLMQMNVKLVFVMEGEPPKLKADVM- 86
Query: 212 TLEKDRDQLLLERGKQT---RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
K R+++ +T + + + + +E E+L+ G+P++ A GEAEA CA L
Sbjct: 87 ---KKRNEIRYGPSGKTWSQKTGRSHFKSLLKECLEMLECLGIPWVQAAGEAEAMCAHLN 143
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
G H G +T+D D +L+GA+TVYKNF K HV YT ++
Sbjct: 144 AGGHVDGCLTNDGDAFLYGAQTVYKNFTMNTKDPHVDCYTMSSVK 188
>gi|109658826|gb|AAI17205.1| Gen homolog 1, endonuclease (Drosophila) [Homo sapiens]
gi|313883890|gb|ADR83431.1| Gen homolog 1, endonuclease (Drosophila) (GEN1), transcript variant
2 [synthetic construct]
Length = 908
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T GSV HL L+ RI L +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMMGSVMKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQ--TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
+ R GK + + + + RE +L+ G+P++ A GEAEA CA L
Sbjct: 88 KRNQTR---YGSSGKSWSQKTGRSHFKSVLRECLHMLECLGIPWVQAAGEAEAMCAYLNA 144
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
G H G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 145 GGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVDCYTMSSIK 188
>gi|47077235|dbj|BAD18538.1| unnamed protein product [Homo sapiens]
Length = 908
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T GSV HL L+ RI L +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMMGSVMKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQ--TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
+ R GK + + + + RE +L+ G+P++ A GEAEA CA L
Sbjct: 88 KRNQTR---YGSSGKSWSQKTGRSHFKSVLRECLHMLECLGIPWVQAAGEAEAMCAYLNA 144
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
G H G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 145 GGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVDCYTMSSIK 188
>gi|109658672|gb|AAI17207.1| Gen homolog 1, endonuclease (Drosophila) [Homo sapiens]
Length = 908
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T GSV HL L+ RI L +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMMGSVMKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQ--TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
+ R GK + + + + RE +L+ G+P++ A GEAEA CA L
Sbjct: 88 KRNQTR---YGSSGKSWSQKTGRSHFKSVLRECLHMLECLGIPWVQAAGEAEAMCAYLNA 144
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
G H G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 145 GGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVDCYTMSSIK 188
>gi|348574836|ref|XP_003473196.1| PREDICTED: flap endonuclease GEN homolog 1-like [Cavia porcellus]
Length = 906
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 5/162 (3%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + + G+V HL L+ RI L+ IK VFV +G P+LK ++
Sbjct: 30 DLSLWVCEAQSVRKMM--GTVRKPHLRNLFFRISYLMQMDIKLVFVMEGEPPKLKADVMN 87
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
+ R L + Q S + RE E+L+ G+P++ A GEAEA CA L+ G
Sbjct: 88 KRNQIRYGLSGKTWSQKSGRSHFKSVL-RECLEMLESLGIPWVQAAGEAEAMCAHLDAGG 146
Query: 272 HTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
G +T+D D +L+GA+TVY+NF K HV YTA I+
Sbjct: 147 QVDGCLTNDGDAFLYGAQTVYRNFTMNPKDPHVDCYTASSIK 188
>gi|432945552|ref|XP_004083655.1| PREDICTED: flap endonuclease GEN homolog 1-like [Oryzias latipes]
Length = 783
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 149 LISDVSIWLHQLTKGTHDLAG-GSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK 207
L D+S+W+ + H A G V HL L+ R+ L IK VFV +G P+LK
Sbjct: 27 LAVDLSLWV---CEAQHVQAMMGRVTKPHLRNLFFRVSSLSLMGIKLVFVMEGTAPKLKA 83
Query: 208 QTISTLEKDR-DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+T+S K R Q T + + +E E+L GVP+++A GEAEA CA
Sbjct: 84 ETMSKRTKARYGQFKNPTKCSTNTSRGRFNSILKECAEMLDYLGVPWVMAAGEAEAMCAY 143
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNF 295
L+ G IT+D D +L+GARTVY+NF
Sbjct: 144 LDSQGLVDGCITNDGDAFLYGARTVYRNF 172
>gi|354481807|ref|XP_003503092.1| PREDICTED: flap endonuclease GEN homolog 1 [Cricetulus griseus]
Length = 876
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 15/167 (8%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G+V HL L+ RI L+ +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMIGTVVKPHLRNLFFRISYLIQMNVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQTRLASTIT-----EQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+ R G + S T + + RE E+L+ G+P++ A GEAEA CA
Sbjct: 88 KRTQTR------YGPSGKPCSQKTGRSHFKSVLRECLEMLECLGIPWVQAAGEAEAMCAY 141
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
L H G +T+D D +L+GA+ VY+NF K HV YTA I+
Sbjct: 142 LNASGHVDGCLTNDGDAFLYGAQMVYRNFTMNTKDPHVDCYTASSIK 188
>gi|73980577|ref|XP_540093.2| PREDICTED: flap endonuclease GEN homolog 1 [Canis lupus familiaris]
Length = 908
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 11/165 (6%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G+V HL L+ RI L +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMIGTVMKPHLRNLFFRISYLTLMDVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQT---RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
R+Q+ +T + + + + +E ++L+ G+P++ A GEAEA CA L
Sbjct: 88 R----RNQIRYGPSGKTWSQKAGRSHFKSVLKECLDMLECLGIPWVQAAGEAEAMCAYLN 143
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
H G +T+D D +L+GA+TVY+NF K HV YTA I+
Sbjct: 144 ASGHVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVDCYTASSIK 188
>gi|238881502|gb|EEQ45140.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 990
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G S+P++H+IG + RICKLL+F I P+FVFDGGVP LKKQ
Sbjct: 27 LAIDASIWIYQFLKAMRDKDGNSLPSSHIIGFFRRICKLLYFGILPIFVFDGGVPALKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVP 252
TI+ ++ R++ +Q + Q+ REA+ L P
Sbjct: 87 TINNRKQRREK--NSESRQETAQKLLAIQLQREAENALNRLKKP 128
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 218 DQLLLER-GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGV 276
+QLL E+ K R + +TE M + QELL+ FG+P+I AP EAEAQCA L G+
Sbjct: 708 EQLLQEKFQKAKRDSDEVTEAMINDVQELLKRFGIPYITAPMEAEAQCAELYKIGLVDGI 767
Query: 277 ITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
+TDDSD +LFG +YKN FD+K +V Y D+
Sbjct: 768 VTDDSDCFLFGGDKIYKNMFDQKQYVEFYLQDDL 801
>gi|363732508|ref|XP_419963.2| PREDICTED: flap endonuclease GEN homolog 1 [Gallus gallus]
Length = 639
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+S+W+ + T G V HL L+ R IK VFV +G P+LK
Sbjct: 27 LAVDLSLWVCEAQ--TVKKMIGVVTKPHLRNLFFRYSFFTSMGIKLVFVMEGEAPKLKAD 84
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
T+S + R + G R + + + +E +LL+ GVP++ A GEAEA CA L
Sbjct: 85 TMSKRNEIRYGASNKHG-VARTGRSSFKSILKECLQLLECLGVPWVQAAGEAEAMCAYLN 143
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
H G IT+D D++L+GA+TVY+NF K+ H+ YT I+
Sbjct: 144 AKGHVDGCITNDGDVFLYGAQTVYRNFAMNSKEPHLDCYTMSSIK 188
>gi|212540874|ref|XP_002150592.1| DNA excision repair protein Rad2 [Talaromyces marneffei ATCC 18224]
gi|210067891|gb|EEA21983.1| DNA excision repair protein Rad2 [Talaromyces marneffei ATCC 18224]
Length = 1127
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLLFF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNAHVVGFFRRICKLLFFGIKPVFVFDGGAPILKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITE-QMSREAQE 244
TI+ +K RD R R A + Q+ R A+E
Sbjct: 87 TIAARKKRRDG---RREDAVRTAGKLLAIQIQRRAEE 120
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
E++ QL ++ K R A I++ M E Q+LL+LFG+P+I AP EAEAQCA L
Sbjct: 801 FEQELKQLRNQQKKDRRDADEISQIMVSECQQLLRLFGLPYITAPMEAEAQCAELVSLGL 860
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G++TDDSD +LFG +YKN F++ V + + D+
Sbjct: 861 VDGIVTDDSDTFLFGGTRIYKNMFNQSKFVECFLSNDL 898
>gi|322795199|gb|EFZ18021.1| hypothetical protein SINV_07188 [Solenopsis invicta]
Length = 231
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 11/90 (12%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L DVSIW++Q+ +G D G PNAHL+GL+ RICKLL++KIKPVFVFDGGVP LKK
Sbjct: 27 LAIDVSIWIYQILQGYQDRHGTPRPNAHLLGLFTRICKLLYYKIKPVFVFDGGVPMLKKN 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQM 238
TI+ R KQ +A++ ++M
Sbjct: 87 TIAL-----------RRKQKSIATSKAQKM 105
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 22/140 (15%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPPSVSREV--------- 51
A R+ KS A S A K+++DL+ NL++ ++ VL K++ + S + ++
Sbjct: 89 ALRRKQKSIATSKAQKMKADLINNLIKHSVVKTVLNKDQNSKDQNSEAIQITMNMQTKRS 148
Query: 52 --DMFELPPAPA-----QTVQDEEEDSD-----SDDTEAKFRYADLHSVDINSEQFSALP 99
DMF LP P V D++ DSD S ++K+ ++H+VD+ S +F ALP
Sbjct: 149 DQDMFALPDMPGISDIQNYVDDDQHDSDTIVQLSPRKQSKW-IGNIHNVDVTSSEFKALP 207
Query: 100 PDMRHEILTELLEQRKLSSW 119
D+R++ILT+L E RK +SW
Sbjct: 208 ADVRYDILTDLKETRKQNSW 227
>gi|444731111|gb|ELW71474.1| DNA repair protein complementing XP-G cells [Tupaia chinensis]
Length = 1217
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 63/95 (66%), Gaps = 7/95 (7%)
Query: 216 DRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQG 275
+++ L ++ +Q R+A+T+T QM E+Q +P+I AP EAEAQCA L+L + T G
Sbjct: 793 EQNSLKAQKQQQERIAATVTGQMFLESQ-------IPYIEAPMEAEAQCAVLDLTDQTAG 845
Query: 276 VITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
ITDDSDIWLFGAR VYKNFF+K V Y D
Sbjct: 846 TITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDF 880
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 82 YADLHSVDINSEQFSALPPDMRHEILTELLE--QRKLSSWHKMHE 124
+ + HS+DI SE F +LPP+++HEILT++ E +R+ + + M E
Sbjct: 213 FQNPHSIDIESEDFISLPPEVKHEILTDMKEFTKRRRTLFETMPE 257
>gi|226289636|gb|EEH45120.1| DNA-repair protein rad13 [Paracoccidioides brasiliensis Pb18]
Length = 1178
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 10/100 (10%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNAHIVGFFRRICKLLYFGIKPVFVFDGGAPTLKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITE----QMSREAQE 244
TI+ +K R+ G+ A T + QM R+A+E
Sbjct: 87 TITARKKRRE------GRSEDAARTAGKLLAVQMQRKAEE 120
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 68/130 (52%), Gaps = 13/130 (10%)
Query: 181 YHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSR 240
+ R L FK + FD E++ QL ++ K R A ++ M
Sbjct: 803 HARFASTLNFKSQAENAFD-------------YEQELKQLRSQQKKDRRDADEVSHIMVS 849
Query: 241 EAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKS 300
E QELL+LFG+P+I AP EAEAQCA L GV+TDDSDI+LFG VYKN F++
Sbjct: 850 ECQELLRLFGLPYITAPMEAEAQCAELVSLGLVDGVVTDDSDIFLFGGTRVYKNMFNQVK 909
Query: 301 HVLRYTAPDI 310
V Y D+
Sbjct: 910 FVECYLNSDL 919
>gi|225682262|gb|EEH20546.1| DNA-repair protein rad13 [Paracoccidioides brasiliensis Pb03]
Length = 1233
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 10/100 (10%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 82 LAVDASIWIYQFLKAVRDKEGNALRNAHIVGFFRRICKLLYFGIKPVFVFDGGAPTLKRQ 141
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITE----QMSREAQE 244
TI+ +K R+ G+ A T + QM R+A+E
Sbjct: 142 TITARKKRRE------GRSEDAARTAGKLLAVQMQRKAEE 175
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 68/130 (52%), Gaps = 13/130 (10%)
Query: 181 YHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSR 240
+ R L FK + FD E++ QL ++ K R A ++ M
Sbjct: 858 HARFASTLNFKSQAENAFD-------------YEQELKQLRSQQKKDRRDADEVSHIMVS 904
Query: 241 EAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKS 300
E QELL+LFG+P+I AP EAEAQCA L GV+TDDSDI+LFG VYKN F++
Sbjct: 905 ECQELLRLFGLPYITAPMEAEAQCAELVSLGLVDGVVTDDSDIFLFGGTRVYKNMFNQVK 964
Query: 301 HVLRYTAPDI 310
V Y D+
Sbjct: 965 FVECYLNSDL 974
>gi|195025439|ref|XP_001986060.1| GH21157 [Drosophila grimshawi]
gi|317374890|sp|B4J6M4.1|FEN1_DROGR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|193902060|gb|EDW00927.1| GH21157 [Drosophila grimshawi]
Length = 388
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 17/154 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G A P +HL+G+++R +LL IKPV+VFDG P +K
Sbjct: 34 DASMCLYQFLIAVRSEGAQLAAVNGDPTSHLMGMFYRTIRLLDNGIKPVYVFDGAPPDMK 93
Query: 207 KQTISTLEKDRDQL------LLERG------KQTRLASTITEQMSREAQELLQLFGVPFI 254
++ + RD+ E G K R +T++ SREA+ELL+L GVP++
Sbjct: 94 SGELAKRAERRDEAEKALKAATEAGDEAQIEKFNRRLVRVTKEHSREAKELLKLMGVPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
AP EAEAQCA+L T+D D FG+
Sbjct: 154 DAPCEAEAQCAALVKAGKVYATATEDMDALTFGS 187
>gi|260948192|ref|XP_002618393.1| hypothetical protein CLUG_01852 [Clavispora lusitaniae ATCC 42720]
gi|238848265|gb|EEQ37729.1| hypothetical protein CLUG_01852 [Clavispora lusitaniae ATCC 42720]
Length = 1019
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Query: 218 DQLLLER-GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGV 276
+QLL E+ K R + +TE M R+ QELL+ FG+P+I AP EAEAQCA L G+
Sbjct: 740 EQLLQEKLQKAKRDSDEVTETMIRDVQELLKRFGIPYITAPMEAEAQCAELFRMGLVDGI 799
Query: 277 ITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
+TDDSD +LFG +YKN F++K +V Y A DI+
Sbjct: 800 VTDDSDCFLFGGSRIYKNMFNQKQYVECYIAEDIK 834
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G + +H++G + RICKLL+F I P+FVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKDGNKLGQSHIVGFFRRICKLLYFGILPLFVFDGGAPPLKRQ 86
Query: 209 TI 210
I
Sbjct: 87 VI 88
>gi|384493818|gb|EIE84309.1| hypothetical protein RO3G_09019 [Rhizopus delemar RA 99-880]
Length = 816
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 66/98 (67%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
L +D +L ++ K + IT+QM + QELL+LFG+P+IV+P EAEAQCA+LE
Sbjct: 632 LYQDMKELNAQQRKDKGNSDDITDQMIGDIQELLKLFGIPYIVSPMEAEAQCAALERLKL 691
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
+G ITDDSD++LFGA VYKN F+++ V Y DI
Sbjct: 692 IEGTITDDSDVFLFGASRVYKNMFNQQRFVECYRTEDI 729
>gi|395519517|ref|XP_003763891.1| PREDICTED: DNA repair protein complementing XP-G cells-like
[Sarcophilus harrisii]
Length = 818
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 51/67 (76%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+SIWL+Q KG D G SV NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQT++
Sbjct: 56 DISIWLNQALKGVRDRHGNSVQNAHLLTLFHRLCKLLFFRIRPIFVFDGEAPLLKKQTLA 115
Query: 212 TLEKDRD 218
+ +D
Sbjct: 116 KRRQRKD 122
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 11/122 (9%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPPPSVSREVDMFELPPA 59
A+R+ K A++++ K LLK L++Q + L GK + LP + + DM+ LP
Sbjct: 115 AKRRQRKDLASTDSKKTTEKLLKTFLKRQAIKTALRGKRDEVLPSLTQVQRDDMYVLPSL 174
Query: 60 PAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
+ EE+ S + +F + + H++DI SE FS LPP+++HEILT++
Sbjct: 175 QEEEKNSSEEEDEKEWQIRMSQKQALQEEF-FHNPHAIDIESEDFSCLPPEIKHEILTDM 233
Query: 111 LE 112
E
Sbjct: 234 KE 235
>gi|68486229|ref|XP_709963.1| hypothetical protein CaO19.1324 [Candida albicans SC5314]
gi|68486286|ref|XP_713000.1| hypothetical protein CaO19.8904 [Candida albicans SC5314]
gi|46434429|gb|EAK93839.1| hypothetical protein CaO19.8904 [Candida albicans SC5314]
gi|46434462|gb|EAK93871.1| hypothetical protein CaO19.1324 [Candida albicans SC5314]
Length = 990
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G S+P++H+IG + RICKLL+F I P+FVFDGGVP LKKQ
Sbjct: 27 LAIDASIWIYQFLKAMRDKDGNSLPSSHIIGFFRRICKLLYFGILPIFVFDGGVPALKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVP 252
TI+ ++ R++ +Q + Q+ REA+ L P
Sbjct: 87 TINNRKQRREK--NSESRQETAQKLLAIQLQREAENALNRSKKP 128
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 218 DQLLLER-GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGV 276
+QLL E+ K R + +TE M + QELL+ FG+P+I AP EAEAQCA L G+
Sbjct: 708 EQLLQEKFQKAKRDSDEVTETMINDVQELLKRFGIPYITAPMEAEAQCAELYKIGLVDGI 767
Query: 277 ITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
+TDDSD +LFG +YKN FD+K +V Y D+
Sbjct: 768 VTDDSDCFLFGGDKIYKNMFDQKQYVEFYLQDDL 801
>gi|405969706|gb|EKC34660.1| Flap endonuclease GEN-like protein 1 [Crassostrea gigas]
Length = 955
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIW+ + T+ + G V +L L+ RI LL + VFV +G P LK+Q
Sbjct: 27 LAVDLSIWVCE-TQCVKQMQG-VVSKPYLRNLFFRISHLLQLGVHLVFVIEGRAPDLKQQ 84
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
++ ++ R G Q + +E E+L GVP++ +PGEAEA CA+L
Sbjct: 85 VMAKRQETRFPQRKAVGGQRQGGRRNFNACLKECCEMLDYLGVPYVHSPGEAEATCAALN 144
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDI 310
+T+D D +L+GARTVY+NF K HV Y D+
Sbjct: 145 ASGVVDACLTNDGDAFLYGARTVYRNFTMNTKDPHVECYCMTDV 188
>gi|47201249|emb|CAF87424.1| unnamed protein product [Tetraodon nigroviridis]
Length = 175
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 243 QELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHV 302
+ELL+LFGVPF++AP EAEAQCA+L+ + T G ITDDSD+WLFG R VYKNFF + +V
Sbjct: 56 EELLRLFGVPFLIAPMEAEAQCAALDRADQTHGTITDDSDVWLFGGRHVYKNFFSQNKYV 115
Query: 303 LRYTAPDIR 311
+ D++
Sbjct: 116 EYFQYSDLQ 124
>gi|253744402|gb|EET00616.1| Flap structure-specific endonuclease [Giardia intestinalis ATCC
50581]
Length = 361
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 25/188 (13%)
Query: 126 PQNDQHSMLEFRCNIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNA------HLIG 179
P +++ CN VI D S+ L+Q G ++ N+ HL+G
Sbjct: 15 PAAVSKRLIQHYCNRVIA-------IDASVMLYQFITTITSGDGTALANSSGEITSHLVG 67
Query: 180 LYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLE-----------RGKQ- 227
L ++ +++ IKP+FVFDG P+ K+ + + R+ LE R KQ
Sbjct: 68 LLSKVTRMVEAGIKPIFVFDGKPPEDKQGELEKRRQAREAAELEQQKAEEEGDIERAKQL 127
Query: 228 TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFG 287
+R +T+Q ++A++LL + G+P++VA GEAEAQC ++ +GV + D D+ FG
Sbjct: 128 SRRTVKVTQQHCKQAEKLLDILGIPYVVAAGEAEAQCVAMAKAGLCEGVASSDLDVLAFG 187
Query: 288 ARTVYKNF 295
+ ++ +N
Sbjct: 188 SPSLIRNL 195
>gi|344246628|gb|EGW02732.1| Flap endonuclease GEN-like 1 [Cricetulus griseus]
Length = 317
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 15/167 (8%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G+V HL L+ RI L+ +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMIGTVVKPHLRNLFFRISYLIQMNVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQTRLASTIT-----EQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+ R G + S T + + RE E+L+ G+P++ A GEAEA CA
Sbjct: 88 KRTQTR------YGPSGKPCSQKTGRSHFKSVLRECLEMLECLGIPWVQAAGEAEAMCAY 141
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
L H G +T+D D +L+GA+ VY+NF K HV YTA I+
Sbjct: 142 LNASGHVDGCLTNDGDAFLYGAQMVYRNFTMNTKDPHVDCYTASSIK 188
>gi|398403715|ref|XP_003853324.1| hypothetical protein MYCGRDRAFT_109224 [Zymoseptoria tritici
IPO323]
gi|339473206|gb|EGP88300.1| hypothetical protein MYCGRDRAFT_109224 [Zymoseptoria tritici
IPO323]
Length = 1324
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLLFF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLFFGIKPVFVFDGGAPALKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLAST-ITEQMSREAQE 244
TI + R+ +R R A + +QM R A+E
Sbjct: 87 TIRARKSRREG---KREDAVRTAGKLLAKQMQRRAEE 120
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 59/101 (58%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +T M E Q LL+LFG+P+I AP EAEAQCA L
Sbjct: 950 ERELKQLRNQQKKDRRDADEVTHIMITECQALLRLFGLPYITAPMEAEAQCAELVKLGLV 1009
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
G++TDDSD +LFG +YKN F++ V Y D+ F
Sbjct: 1010 DGIVTDDSDCFLFGGTRIYKNMFNQAKFVECYLTSDLEKEF 1050
>gi|148540148|ref|NP_796305.3| flap endonuclease GEN homolog 1 [Mus musculus]
gi|166221585|sp|Q8BMI4.2|GEN_MOUSE RecName: Full=Flap endonuclease GEN homolog 1
gi|60334795|gb|AAH90653.1| Gen homolog 1, endonuclease (Drosophila) [Mus musculus]
gi|187957028|gb|AAI38159.1| Gen homolog 1, endonuclease (Drosophila) [Mus musculus]
gi|187957572|gb|AAI38158.1| Gen homolog 1, endonuclease (Drosophila) [Mus musculus]
Length = 908
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G+V HL L+ RI L +K VFV +G P LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMIGTVKKPHLRNLFFRISYLTQMNVKLVFVMEGEPPMLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
+ R + + + + + + RE E+L+ G+P++ A GEAEA CA L
Sbjct: 88 KRTQTR-YGPSGKSRSQKTGRSHFKSVLRECLEMLECLGMPWVQAAGEAEAMCAYLNASG 146
Query: 272 HTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
H G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 147 HVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVDCYTISSIK 188
>gi|154280855|ref|XP_001541240.1| hypothetical protein HCAG_03337 [Ajellomyces capsulatus NAm1]
gi|150411419|gb|EDN06807.1| hypothetical protein HCAG_03337 [Ajellomyces capsulatus NAm1]
Length = 1111
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 10/103 (9%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNAHIVGFFQRICKLLYFGIKPVFVFDGGAPTLKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITE----QMSREAQELLQ 247
TI + ++ R+ GK+ A T + Q+ R+A+E ++
Sbjct: 87 TIMSRKQRRE------GKRENAAKTAGKILAVQIQRKAEEEIE 123
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 61/97 (62%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A ++ M E QELL+LFG+P+I AP EAEAQCA L
Sbjct: 754 EQELKQLRSQQKKAQRDADEVSHIMVSECQELLRLFGLPYITAPMEAEAQCAELLSLGLV 813
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
GV+TDDSDI+LFG VYKN F++ V Y + D+
Sbjct: 814 DGVVTDDSDIFLFGGTRVYKNMFNQAKFVECYISNDL 850
>gi|148666016|gb|EDK98432.1| RIKEN cDNA 5830483C08 [Mus musculus]
Length = 908
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G+V HL L+ RI L +K VFV +G P LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMIGTVKKPHLRNLFFRISYLTQMNVKLVFVMEGEPPMLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
+ R + + + + + + RE E+L+ G+P++ A GEAEA CA L
Sbjct: 88 KRTQTR-YGPSGKSRSQKTGRSHFKSVLRECLEMLECLGMPWVQAAGEAEAMCAYLNASG 146
Query: 272 HTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
H G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 147 HVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVDCYTISSIK 188
>gi|26326927|dbj|BAC27207.1| unnamed protein product [Mus musculus]
Length = 908
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G+V HL L+ RI L +K VFV +G P LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMIGTVKKPHLRNLFFRISYLTQMNVKLVFVMEGEPPMLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
+ R + + + + + + RE E+L+ G+P++ A GEAEA CA L
Sbjct: 88 KRTQTR-YGPSGKSRSQKTGRSHFKSVLRECLEMLECLGMPWVQAAGEAEAMCAYLNASG 146
Query: 272 HTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
H G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 147 HVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVDCYTISSIK 188
>gi|325095909|gb|EGC49219.1| DNA excision repair protein Rad2 [Ajellomyces capsulatus H88]
Length = 1159
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNAHIVGFFQRICKLLYFGIKPVFVFDGGAPTLKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTI-TEQMSREAQELLQ 247
TI + ++ R+ +R R A I Q+ R+A+E ++
Sbjct: 87 TIMSRKQRREG---KRENAARTAGKILAVQIQRKAEEEIE 123
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 61/97 (62%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A ++ M E QELL+LFG+P+I AP EAEAQCA L
Sbjct: 803 EQELKQLRSQQKKARRDADEVSHIMVSECQELLRLFGLPYITAPMEAEAQCAELLSLGLV 862
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
GV+TDDSDI+LFG VYKN F++ V Y + D+
Sbjct: 863 DGVVTDDSDIFLFGGTRVYKNMFNQAKFVECYISNDL 899
>gi|240273423|gb|EER36944.1| DNA excision repair protein Rad2 [Ajellomyces capsulatus H143]
Length = 1159
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNAHIVGFFQRICKLLYFGIKPVFVFDGGAPTLKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTI-TEQMSREAQELLQ 247
TI + ++ R+ +R R A I Q+ R+A+E ++
Sbjct: 87 TIMSRKQRREG---KRENAARTAGKILAVQIQRKAEEEIE 123
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 61/97 (62%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A ++ M E QELL+LFG+P+I AP EAEAQCA L
Sbjct: 803 EQELKQLRSQQKKARRDADEVSHIMVSECQELLRLFGLPYITAPMEAEAQCAELLSLGLV 862
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
GV+TDDSDI+LFG VYKN F++ V Y + D+
Sbjct: 863 DGVVTDDSDIFLFGGTRVYKNMFNQAKFVECYISNDL 899
>gi|294660024|ref|XP_462477.2| DEHA2G21494p [Debaryomyces hansenii CBS767]
gi|199434412|emb|CAG90987.2| DEHA2G21494p [Debaryomyces hansenii CBS767]
Length = 1034
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Query: 218 DQLLLER-GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGV 276
+QLL E+ K R + +TE M R+ QELL+ FG+P+I AP EAEAQCA L N G+
Sbjct: 750 EQLLQEQLQKAKRDSDEVTETMIRDVQELLRRFGIPYITAPMEAEAQCAELLKLNLVDGI 809
Query: 277 ITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
ITDDSD +LFG VYKN F++K +V Y DI
Sbjct: 810 ITDDSDCFLFGGDKVYKNMFNQKQYVECYIMNDI 843
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 48/70 (68%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G S+P AH++G + RICKLL+F I P+FVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDQEGNSMPQAHIVGFFRRICKLLYFGIYPIFVFDGGAPALKRQ 86
Query: 209 TISTLEKDRD 218
TI+ + R+
Sbjct: 87 TINQRRERRE 96
>gi|320167228|gb|EFW44127.1| DNA-repair protein rad13 [Capsaspora owczarzaki ATCC 30864]
Length = 1235
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 61/92 (66%)
Query: 223 ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
E + R +++ +M + QELL+LFG+P++ AP EAEAQCA+L+L T G IT+DSD
Sbjct: 874 ELNRYERDVASVDSEMIADTQELLRLFGMPYLTAPMEAEAQCAALDLAGITDGTITEDSD 933
Query: 283 IWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
++LFGAR VY+NFF+ + Y + I Y
Sbjct: 934 VFLFGARRVYRNFFNPNKYAEFYASSAIESYL 965
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L DVSIWL+Q K D G + NAHLIGL+ R+CKLL++ IKP+FV+DGGVP LK++
Sbjct: 78 LAIDVSIWLNQHMKAMRDAEGNVIRNAHLIGLFRRLCKLLYYGIKPLFVYDGGVPALKRR 137
Query: 209 TISTL--EKDRDQLLLERGKQTRLASTITEQM 238
T++ +KD Q L++ + L++ + QM
Sbjct: 138 TLAGRRHQKDLAQDSLKKTAERLLSNALKRQM 169
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 79 KFRY-ADLHSVDINSEQFSALPPDMRHEILTELLEQRKLSSWHKMHEM 125
+ RY L VD +S +F ALPP+++HEILTE+ E R+ ++W + +
Sbjct: 286 RLRYWKQLSRVDTSSPEFLALPPEVQHEILTEVKEYRRRTAWARFDRL 333
>gi|225558184|gb|EEH06469.1| DNA excision repair protein Rad2 [Ajellomyces capsulatus G186AR]
Length = 1159
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNAHIVGFFQRICKLLYFGIKPVFVFDGGAPTLKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITE-QMSREAQELLQ 247
TI + ++ R+ +R R A I Q+ R+A+E ++
Sbjct: 87 TIMSRKQRREG---KRENAARTAGKILAVQIQRKAEEEIE 123
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 61/99 (61%)
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
E++ QL ++ K R A ++ M E QELL+LFG+P+I AP EAEAQCA L
Sbjct: 801 NYEQELKQLRSQQKKARRDADEVSHIMISECQELLRLFGLPYITAPMEAEAQCAELLSLG 860
Query: 272 HTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
GV+TDDSDI+LFG VYKN F++ V Y + D+
Sbjct: 861 LVDGVVTDDSDIFLFGGTRVYKNMFNQAKFVECYISNDL 899
>gi|426334793|ref|XP_004028921.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 1 [Gorilla
gorilla gorilla]
gi|426334795|ref|XP_004028922.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 2 [Gorilla
gorilla gorilla]
Length = 908
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 84/164 (51%), Gaps = 9/164 (5%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T GSV HL L+ RI L +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMMGSVMKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQ--TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
+ R GK + + + + RE +L+ G+P++ A GEAEA CA L
Sbjct: 88 KRNQTR---YGSSGKSWSQKTGRSHFKSVLRECLHMLECLGIPWVQAAGEAEAMCAYLNA 144
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
H G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 145 DGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVDCYTMSSIK 188
>gi|389642679|ref|XP_003718972.1| DNA-repair protein rad13 [Magnaporthe oryzae 70-15]
gi|351641525|gb|EHA49388.1| DNA-repair protein rad13 [Magnaporthe oryzae 70-15]
gi|440472732|gb|ELQ41574.1| DNA-repair protein rad13 [Magnaporthe oryzae Y34]
gi|440485125|gb|ELQ65111.1| DNA-repair protein rad13 [Magnaporthe oryzae P131]
Length = 1269
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 65/110 (59%)
Query: 201 GVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEA 260
G P Q++ EK+ QL ++ K R A +++ M E Q+LL+LFG+P++ AP EA
Sbjct: 876 GKPAATAQSVEEYEKELKQLRAQQKKDRRDADEVSQVMVTECQQLLRLFGIPYVTAPMEA 935
Query: 261 EAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
EAQCA L G++TDDSD +LFG VYKN F+ V Y A D+
Sbjct: 936 EAQCAELVRLGLVDGIVTDDSDTFLFGGTRVYKNMFNGNKFVECYLASDL 985
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 44/62 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H+IG + RICKLL+F IKPVFVFDGG P LK+
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVIGFFRRICKLLWFGIKPVFVFDGGAPVLKRA 86
Query: 209 TI 210
T+
Sbjct: 87 TL 88
>gi|26326997|dbj|BAC27242.1| unnamed protein product [Mus musculus]
Length = 908
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G++ HL L+ RI L +K VFV +G P LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMIGTIKKPHLRNLFFRISYLTQMNVKLVFVMEGEPPMLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
+ R + + + + + + RE E+L+ G+P++ A GEAEA CA L
Sbjct: 88 KRTQTR-YGPSGKSRSQKTGRSHFKSVLRECLEMLECLGMPWVQAAGEAEAMCAYLNASG 146
Query: 272 HTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
H G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 147 HVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVDCYTISSIK 188
>gi|61403387|gb|AAH91993.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 5 (xeroderma pigmentosum,
complementation group G (Cockayne syndrome)) [Danio
rerio]
gi|182891882|gb|AAI65440.1| Ercc5 protein [Danio rerio]
Length = 249
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 53/71 (74%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G +V NAHL+ L+HR+CKLLFF+I+PVFV+DG P LKKQ
Sbjct: 27 LAVDISIWLNQAVKGVRDRDGNAVQNAHLLTLFHRLCKLLFFRIRPVFVYDGDAPLLKKQ 86
Query: 209 TISTLEKDRDQ 219
T++ + R++
Sbjct: 87 TLAVRRQRREE 97
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 19/138 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPP--SVSREV--DMFEL 56
A R+ + + + + LL+ L++Q + LG+N P SV R+ D++ L
Sbjct: 89 AVRRQRREETNRESRQTSEKLLQTFLKRQAIRAALGENSQESAPSLSSVRRDEHDDIYVL 148
Query: 57 PPAPAQTVQDE---EEDSDSDDTEAKFRYADLH--------SVDINSEQFSALPPDMRHE 105
P P + + E EE+ D D EA Y+ +VDINSEQFS +PP+++HE
Sbjct: 149 PALPPEDDRQESSSEEEKDGD--EALHNYSRFQEELCDNPDAVDINSEQFSLMPPEIKHE 206
Query: 106 ILTELLE--QRKLSSWHK 121
IL E+ E +R+ + HK
Sbjct: 207 ILKEMKEFSKRRRTLLHK 224
>gi|407928397|gb|EKG21254.1| Xeroderma pigmentosum group G protein [Macrophomina phaseolina MS6]
Length = 1302
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLLF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLFIGIKPVFVFDGGAPALKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLAST-ITEQMSREAQE 244
TIS + R+ R R AS + QM R A+E
Sbjct: 87 TISARKSRREG---RREDAVRTASKLLAVQMQRRAEE 120
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
Query: 206 KKQTISTLEKDRD--QLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQ 263
K Q ++ ++ +R+ L ++ K R A +T+ M E Q+LL LFG+P+I AP EAEAQ
Sbjct: 890 KSQEVNAIDYERELKALRTQQKKDRRDADEVTQTMIAECQQLLSLFGLPYITAPMEAEAQ 949
Query: 264 CASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
CA L G++TDDSDI+LFG VYKN F++ V Y + D+ F
Sbjct: 950 CAELVDLGLVDGIVTDDSDIFLFGGTRVYKNMFNQAKFVECYLSQDLESEF 1000
>gi|241954550|ref|XP_002419996.1| DNA-repair protein RAD2 orthologue, putative; single-stranded DNA
endonuclease, putative [Candida dubliniensis CD36]
gi|223643337|emb|CAX42212.1| DNA-repair protein RAD2 orthologue, putative [Candida dubliniensis
CD36]
Length = 992
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G S+P++H+IG + RICKLL+F I P+FVFDGGVP LKKQ
Sbjct: 27 LAIDASIWIYQFLKAMRDKDGNSLPSSHIIGFFRRICKLLYFGILPIFVFDGGVPVLKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELL 246
TI+ + R++ +Q + Q+ REA+ L
Sbjct: 87 TINNRRQRREK--NSESRQETAQKLLAIQLQREAENAL 122
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 218 DQLLLER-GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGV 276
+QLL E+ K R + +TE M + QELL+ FG+P+I AP EAEAQCA L G+
Sbjct: 710 EQLLQEKFQKAKRDSDEVTEAMINDVQELLKRFGIPYITAPMEAEAQCAELFKIGLVDGI 769
Query: 277 ITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
+TDDSD +LFG +YKN FD+K +V Y D+
Sbjct: 770 VTDDSDCFLFGGDKIYKNMFDQKQYVEFYLQDDL 803
>gi|391332092|ref|XP_003740472.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Metaseiulus occidentalis]
Length = 957
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 72/126 (57%), Gaps = 13/126 (10%)
Query: 198 FDGGVPQLKKQ----TIST--LEKDRDQLLL-------ERGKQTRLASTITEQMSREAQE 244
+ GV +K + T+ST +E R+QL + E + R S IT M+ + +E
Sbjct: 636 LNNGVDSMKARPATSTMSTEQIEARREQLQVQNTALQNEINRIQRQTSEITASMAEDCEE 695
Query: 245 LLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLR 304
LL++FG+P + AP EAEAQCA+LE QGV+TDDSDI+LFG VYKN F +
Sbjct: 696 LLKMFGIPVVRAPREAEAQCAALEQAGLVQGVVTDDSDIFLFGGNVVYKNLFSQDHQCEM 755
Query: 305 YTAPDI 310
Y A I
Sbjct: 756 YAAKTI 761
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+QL KG G V NAHL+GL+ R+CKLL +KIKPVFVFDG P LK Q
Sbjct: 27 LAIDISIWLNQLIKGYRTSGGAGVDNAHLVGLFQRVCKLLHYKIKPVFVFDGEAPALKYQ 86
Query: 209 TISTLEKDRD 218
T+++ ++ R+
Sbjct: 87 TLASRKRRRE 96
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPPSVSREVDMFELPPAP 60
A RK + K +L +EQ+LL + K P +F+LPP
Sbjct: 89 ASRKRRREDGNEAIRKATQRMLHTYVEQKLLGEANPKLPKLKPSRRDQENESLFKLPPG- 147
Query: 61 AQTVQDEEEDSDSDDTEAKFRY-ADLHSVDINSEQFSALPPDMRHEILTELLEQRKLSSW 119
+ ++DE +DS SD Y ADL ++ ++SE+F LP +++HE L L EQ K S
Sbjct: 148 SMLIKDESDDSMSD---VDVSYNADLANIKVDSEEFKTLPSELQHEFLVALKEQAKRGS- 203
Query: 120 HKMHEMPQNDQHSMLEFRCNIVINK 144
+ E+P D+ F+ + ++ K
Sbjct: 204 RPVDELPV-DRDDFSSFQMDQILKK 227
>gi|295662156|ref|XP_002791632.1| DNA-repair protein rad13 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279758|gb|EEH35324.1| DNA-repair protein rad13 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1178
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 62/100 (62%), Gaps = 10/100 (10%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNAHIVGFFRRICKLLYFGIKPVFVFDGGAPALKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITE----QMSREAQE 244
TI+ +K R+ G+ A T + Q+ R+A+E
Sbjct: 87 TITARKKRRE------GRTEDAARTAGKLLAVQIQRKAEE 120
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 68/130 (52%), Gaps = 13/130 (10%)
Query: 181 YHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSR 240
+ R L FK + FD E++ QL ++ K R A ++ M
Sbjct: 803 HARFASTLNFKSQAENAFD-------------YEQELKQLRSQQKKDRRDADEVSHIMVS 849
Query: 241 EAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKS 300
E QELL+LFG+P+I AP EAEAQCA L GV+TDDSDI+LFG VYKN F++
Sbjct: 850 ECQELLRLFGLPYITAPMEAEAQCAELVSLGLVDGVVTDDSDIFLFGGTRVYKNMFNQVK 909
Query: 301 HVLRYTAPDI 310
V Y D+
Sbjct: 910 FVECYLNSDL 919
>gi|354547816|emb|CCE44551.1| hypothetical protein CPAR2_403540 [Candida parapsilosis]
Length = 994
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 6/98 (6%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++P +H++G + RICKLL+F I+P+FVFDGGVP LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALPQSHIVGFFRRICKLLYFGIQPIFVFDGGVPVLKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLAST--ITEQMSREAQE 244
TI+ + R Q + TR A+ + Q+ R+A+E
Sbjct: 87 TINERKNRRQQ----NSESTRQAAQKLLAIQLQRQAEE 120
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 218 DQLLLER-GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGV 276
+QLL E+ K R + +TE M + QELL+ FG+P+I AP EAEAQCA L G+
Sbjct: 711 EQLLQEKLHKAKRDSDEVTENMIGDVQELLKRFGIPYITAPMEAEAQCAELYKIGLVDGI 770
Query: 277 ITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
ITDDSD +LFG +YKN F +K V Y DI
Sbjct: 771 ITDDSDCFLFGGDRIYKNMFSQKQFVECYLKNDI 804
>gi|149728133|ref|XP_001503466.1| PREDICTED: flap endonuclease GEN homolog 1 [Equus caballus]
Length = 908
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G+V HL L+ RI L +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMIGTVLKPHLRNLFFRISYLTLMDVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQT---RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
R+Q+ +T + + + + RE ++L+ G+P++ A GEAEA CA L
Sbjct: 88 ----KRNQIRYGPSGKTWSQKTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAYLN 143
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
+ G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 144 ASGYVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVDCYTMSSIK 188
>gi|156717288|ref|NP_001096186.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Xenopus (Silurana) tropicalis]
gi|134024505|gb|AAI36228.1| ercc5 protein [Xenopus (Silurana) tropicalis]
Length = 847
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G ++ NAHL+ L+HR+CKLLFF+I+P+FVFDG P LK+Q
Sbjct: 27 LAIDISIWLNQAVKGARDRQGNAIQNAHLLTLFHRLCKLLFFRIRPIFVFDGEAPLLKRQ 86
Query: 209 TISTLEKDRD 218
T++ + +D
Sbjct: 87 TLAKRRQRKD 96
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 26/145 (17%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMA---LPPPSVSREV---DMF 54
A+R+ K A++ A K LL+ L++Q + L N+ + LP S R D++
Sbjct: 89 AKRRQRKDNASNEAKKTHEKLLRTFLKRQAIKAALSGNKQSNDELPSFSKVRRKETDDLY 148
Query: 55 ELPPAPAQTVQDEEEDSDSDDTEAKFR-------------YADLHSVDINSEQFSALPPD 101
LPP ++D E+ S ++ + +A+ SVDI SE+F +LPP+
Sbjct: 149 ILPP-----LEDNEKYSSEEEEGRAWEERMTQKQRLQEEFFANPSSVDIESEEFISLPPE 203
Query: 102 MRHEILTELLE--QRKLSSWHKMHE 124
++HEILT++ E +R+ + + M E
Sbjct: 204 VKHEILTDMKEFTKRRRTLFEAMPE 228
>gi|452847295|gb|EME49227.1| hypothetical protein DOTSEDRAFT_68105 [Dothistroma septosporum
NZE10]
Length = 1395
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLLFF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLFFGIKPVFVFDGGAPALKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITE----QMSREAQE 244
TI + R+ G++ A T + QM R A+E
Sbjct: 87 TIRARKARRE------GRREDAARTAGKLLAVQMQRRAEE 120
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 63/107 (58%)
Query: 208 QTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASL 267
Q I EK+ QL ++ K R A +T+ M +E Q LL+LFG+P+I AP EAEAQCA L
Sbjct: 993 QNIVEYEKELKQLRNQQKKDRRDADEVTQIMIQECQALLRLFGLPYITAPMEAEAQCAEL 1052
Query: 268 ELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
G++TDDSD +LFG +YKN F++ V Y D+ F
Sbjct: 1053 VHLGLVDGIVTDDSDCFLFGGTRIYKNMFNQAKFVECYLTSDLEKEF 1099
>gi|449498163|ref|XP_002196947.2| PREDICTED: flap endonuclease GEN homolog 1 [Taeniopygia guttata]
Length = 617
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+S+W+ + T G V HL L+ R IK VFV +G P+LK
Sbjct: 27 LAVDLSLWVCEAQ--TVKKMVGVVTKPHLRNLFFRFSFFTSMGIKLVFVMEGEAPRLKAD 84
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
T+S + R + G R ++ + M +E E+L+ GVP++ A GEAEA CA L
Sbjct: 85 TMSKRNEMRYGPSKKAG-AVRTGRSLFKAMLKECLEMLECLGVPWVQAAGEAEAMCAYLN 143
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
G +T+D D++L+GA+TVY+NF K H+ YT I+
Sbjct: 144 AKGLVDGCLTNDGDVFLYGAQTVYRNFAMNAKDPHLDSYTMSSIK 188
>gi|298711922|emb|CBJ48609.1| DNA repair enzyme [Ectocarpus siliculosus]
Length = 1835
Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/87 (51%), Positives = 54/87 (62%)
Query: 223 ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
E K R A T+TE+M E +LL+LFGVP++VAP EAEAQC LE G +TDDSD
Sbjct: 1289 EGNKAQRDAETVTEEMKEEVMDLLKLFGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSD 1348
Query: 283 IWLFGARTVYKNFFDKKSHVLRYTAPD 309
+ FG R VYKN F + V Y PD
Sbjct: 1349 AFAFGGRAVYKNIFSDRKFVEAYLLPD 1375
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/71 (52%), Positives = 45/71 (63%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L DVSIWL Q K D G V NAH+IG R+ KLLF +I+PVFVFDGG P LK +
Sbjct: 27 LAVDVSIWLTQFIKAMRDDDGKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKAR 86
Query: 209 TISTLEKDRDQ 219
T++ K R +
Sbjct: 87 TLAARRKLRSE 97
>gi|448530440|ref|XP_003870064.1| Rad2 protein [Candida orthopsilosis Co 90-125]
gi|380354418|emb|CCG23933.1| Rad2 protein [Candida orthopsilosis]
Length = 995
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 21/138 (15%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++P +H++G + RICKLL+F I+P+FVFDGGVP LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALPQSHIVGFFRRICKLLYFGIQPIFVFDGGVPVLKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
TI+ K+R Q E ++T + Q+ R+ +E ++
Sbjct: 87 TINE-RKNRRQQNSESTRET-AQKLLAIQLQRQVEESVE-------------------KR 125
Query: 269 LGNHTQGVITDDSDIWLF 286
LG T+ V +D D+ F
Sbjct: 126 LGTKTRAVDIEDDDVIYF 143
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 218 DQLLLER-GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGV 276
+QLL E+ K R + +TE M + QELL+ FG+P+I AP EAEAQCA L G+
Sbjct: 712 EQLLQEKLQKAKRDSDEVTENMISDVQELLKRFGIPYITAPMEAEAQCAELFRIGLVDGI 771
Query: 277 ITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
ITDDSD +LFG +YKN F++K V Y DI
Sbjct: 772 ITDDSDCFLFGGDRIYKNMFNQKQFVECYFKDDI 805
>gi|344280345|ref|XP_003411944.1| PREDICTED: flap endonuclease GEN homolog 1 [Loxodonta africana]
Length = 739
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G+V HL L+ RI L +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMIGTVMKPHLRNLFFRISFLTLMDVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQT---RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
R+Q+ +T + + + + RE ++L+ G+P++ A GEAEA CA L
Sbjct: 88 K----RNQIRYGPSGKTWSQKTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAYLN 143
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
+ G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 144 ANGYVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVDCYTMSSIK 188
>gi|349578461|dbj|GAA23627.1| K7_Rad2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1031
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 60/93 (64%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K R + +T M +E QELL FG+P+I AP EAEAQCA L N G+I
Sbjct: 751 DELFEQQMKDKRDSDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGII 810
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
TDDSD++LFG +YKN F +K++V Y A I
Sbjct: 811 TDDSDVFLFGGTKIYKNMFHEKNYVEFYDAESI 843
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G +V N+H+ G + RICKLL+F I+PVFVFDGGVP LK++TI
Sbjct: 30 DASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIR 89
Query: 212 TLEKDRDQLLLERGKQT 228
K+R Q E K T
Sbjct: 90 Q-RKERRQGKRESAKST 105
>gi|50287803|ref|XP_446331.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525638|emb|CAG59255.1| unnamed protein product [Candida glabrata]
Length = 992
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D++ ++ K R A +T M ++ QELL FG+P+I AP EAEAQCA L G+I
Sbjct: 712 DEIYAQQVKDKRDADEVTMDMIKDVQELLARFGIPYITAPMEAEAQCAELVNLKLVDGII 771
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
TDDSD++LFG + VYKN F +K++V Y + DI
Sbjct: 772 TDDSDVFLFGGKKVYKNMFQEKNYVEYYDSEDI 804
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 6/94 (6%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G ++ +AH+ G + R+CKLL+F IKPVFVFDGGVP LK++TI
Sbjct: 30 DASIWIYQFLKAVRDKEGNAIKSAHITGFFRRVCKLLYFGIKPVFVFDGGVPVLKRKTIQ 89
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQEL 245
++ R+ GK+ +T + ++++ Q L
Sbjct: 90 KRKERRE------GKRDNATNTAKKILAKQLQTL 117
>gi|5020|emb|CAA47291.1| excision repair protein [Schizosaccharomyces pombe]
Length = 1113
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 61/92 (66%)
Query: 223 ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
++G + R A +T+ M +E QELL+LFG+P+IVAP EAEAQC+ L G++TDDSD
Sbjct: 742 KKGSEKRDADEVTQVMIKECQELLRLFGLPYIVAPQEAEAQCSKLLELKLVDGIVTDDSD 801
Query: 283 IWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
++LFG VY+N F++ V Y D++ F
Sbjct: 802 VFLFGGTRVYRNMFNQNKFVELYLMDDMKREF 833
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 137 RCNIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVF 196
+ ++NK L D SIW++Q K D G + ++H++G + RICKLLFF IKPVF
Sbjct: 18 KLETLVNKRLA---IDASIWIYQFLKAVRDKEGNQLKSSHVVGFFRRICKLLFFGIKPVF 74
Query: 197 VFDGGVPQLKKQTI 210
VFDGG P LK+QTI
Sbjct: 75 VFDGGAPSLKRQTI 88
>gi|365765505|gb|EHN07013.1| Rad2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1031
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 60/93 (64%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K R + +T M +E QELL FG+P+I AP EAEAQCA L N G+I
Sbjct: 751 DELFEQQMKDKRDSDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGII 810
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
TDDSD++LFG +YKN F +K++V Y A I
Sbjct: 811 TDDSDVFLFGGTKIYKNMFHEKNYVEFYDAESI 843
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G +V N+H+ G + RICKLL+F I+PVFVFDGGVP LK++TI
Sbjct: 30 DASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIR 89
Query: 212 TLEKDRDQLLLERGKQT 228
K+R Q E K T
Sbjct: 90 Q-RKERRQGKRESAKST 105
>gi|151943533|gb|EDN61844.1| radiation sensitive protein [Saccharomyces cerevisiae YJM789]
Length = 1031
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 60/93 (64%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K R + +T M +E QELL FG+P+I AP EAEAQCA L N G+I
Sbjct: 751 DELFEQQMKDKRDSDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGII 810
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
TDDSD++LFG +YKN F +K++V Y A I
Sbjct: 811 TDDSDVFLFGGTKIYKNMFHEKNYVEFYDAESI 843
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G +V N+H+ G + RICKLL+F I+PVFVFDGGVP LK++TI
Sbjct: 30 DASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIR 89
Query: 212 TLEKDRDQLLLERGKQT 228
K+R Q E K T
Sbjct: 90 Q-RKERRQGKRESAKST 105
>gi|6321697|ref|NP_011774.1| Rad2p [Saccharomyces cerevisiae S288c]
gi|131811|sp|P07276.2|RAD2_YEAST RecName: Full=DNA repair protein RAD2
gi|172329|gb|AAA66928.1| RAD2 [Saccharomyces cerevisiae]
gi|1323470|emb|CAA97287.1| RAD2 [Saccharomyces cerevisiae]
gi|285812449|tpg|DAA08349.1| TPA: Rad2p [Saccharomyces cerevisiae S288c]
gi|392299514|gb|EIW10608.1| Rad2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1031
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 60/93 (64%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K R + +T M +E QELL FG+P+I AP EAEAQCA L N G+I
Sbjct: 751 DELFEQQMKDKRDSDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGII 810
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
TDDSD++LFG +YKN F +K++V Y A I
Sbjct: 811 TDDSDVFLFGGTKIYKNMFHEKNYVEFYDAESI 843
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G +V N+H+ G + RICKLL+F I+PVFVFDGGVP LK++TI
Sbjct: 30 DASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIR 89
Query: 212 TLEKDRDQLLLERGKQT 228
K+R Q E K T
Sbjct: 90 Q-RKERRQGKRESAKST 105
>gi|259146759|emb|CAY80016.1| Rad2p [Saccharomyces cerevisiae EC1118]
Length = 1031
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 60/93 (64%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K R + +T M +E QELL FG+P+I AP EAEAQCA L N G+I
Sbjct: 751 DELFEQQMKDKRDSDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGII 810
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
TDDSD++LFG +YKN F +K++V Y A I
Sbjct: 811 TDDSDVFLFGGTKIYKNMFHEKNYVEFYDAESI 843
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G +V N+H+ G + RICKLL+F I+PVFVFDGGVP LK++TI
Sbjct: 30 DASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIR 89
Query: 212 TLEKDRDQLLLERGKQT 228
K+R Q E K T
Sbjct: 90 Q-RKERRQGKRESAKST 105
>gi|256272689|gb|EEU07666.1| Rad2p [Saccharomyces cerevisiae JAY291]
Length = 1031
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 60/93 (64%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K R + +T M +E QELL FG+P+I AP EAEAQCA L N G+I
Sbjct: 751 DELFEQQMKDKRDSDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGII 810
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
TDDSD++LFG +YKN F +K++V Y A I
Sbjct: 811 TDDSDVFLFGGTKIYKNMFHEKNYVEFYDAESI 843
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G +V N+H+ G + RICKLL+F I+PVFVFDGGVP LK++TI
Sbjct: 30 DASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIR 89
Query: 212 TLEKDRDQLLLERGKQT 228
K+R Q E K T
Sbjct: 90 Q-RKERRQGKRESAKST 105
>gi|452987544|gb|EME87299.1| hypothetical protein MYCFIDRAFT_147956 [Pseudocercospora fijiensis
CIRAD86]
Length = 1298
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLLFF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLFFGIKPVFVFDGGAPALKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQ 243
TI K R + E QT A + +QM A+
Sbjct: 87 TIRA-RKARREGRREDAAQT-AAKILAKQMQHAAE 119
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 64/107 (59%)
Query: 208 QTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASL 267
Q I+ EK+ QL ++ K R A +T+ M +E Q LL+LFG+P+I AP EAEAQCA L
Sbjct: 908 QNIADYEKELKQLRNQQKKDRRDADEVTQTMIQECQALLRLFGLPYITAPMEAEAQCAEL 967
Query: 268 ELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
G++TDDSD +LFG VYKN F++ V Y D+ F
Sbjct: 968 VHLGLVDGIVTDDSDCFLFGGTRVYKNMFNQAKFVECYLTSDLEKEF 1014
>gi|207344901|gb|EDZ71889.1| YGR258Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1031
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 60/93 (64%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K R + +T M +E QELL FG+P+I AP EAEAQCA L N G+I
Sbjct: 751 DKLFEQQMKDKRDSDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGII 810
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
TDDSD++LFG +YKN F +K++V Y A I
Sbjct: 811 TDDSDVFLFGGTKIYKNMFHEKNYVEFYDAESI 843
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G +V N+H+ G + RICKLL+F I+PVFVFDGGVP LK++TI
Sbjct: 30 DASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIR 89
Query: 212 TLEKDRDQLLLERGKQT 228
K+R Q E K T
Sbjct: 90 Q-RKERRQGKRESAKST 105
>gi|323354903|gb|EGA86736.1| Rad2p [Saccharomyces cerevisiae VL3]
Length = 998
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 60/93 (64%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K R + +T M +E QELL FG+P+I AP EAEAQCA L N G+I
Sbjct: 751 DKLFEQQMKDKRDSDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGII 810
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
TDDSD++LFG +YKN F +K++V Y A I
Sbjct: 811 TDDSDVFLFGGTKIYKNMFHEKNYVEFYDAESI 843
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G +V N+H+ G + RICKLL+F I+PVFVFDGGVP LK++TI
Sbjct: 30 DASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIR 89
Query: 212 TLEKDRDQLLLERGKQT 228
K+R Q E K T
Sbjct: 90 Q-RKERRQGKRESAKST 105
>gi|157821963|ref|NP_001100187.1| flap endonuclease GEN homolog 1 [Rattus norvegicus]
gi|149050926|gb|EDM03099.1| similar to RIKEN cDNA 5830483C08 gene (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 908
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G+V HL L+ RI L +K VFV +G P+LK ++
Sbjct: 30 DLSLWVCEAQ--TVKKMIGTVMKPHLRNLFFRISYLTQMNVKLVFVMEGEPPKLKADVMN 87
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
+ R + + + + + + RE E+L+ G+P++ A GEAEA CA L
Sbjct: 88 KRTQTRYGPS-GKSRSQKTGRSHFKSVLRECLEMLECLGMPWVQAAGEAEAMCAYLNASG 146
Query: 272 HTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
H G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 147 HVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVDCYTVSSIK 188
>gi|38614246|gb|AAH60659.1| Ercc5 protein, partial [Mus musculus]
Length = 790
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 54/77 (70%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+SIWL+Q KG D G + NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQT++
Sbjct: 69 DISIWLNQALKGVRDSHGNVIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLA 128
Query: 212 TLEKDRDQLLLERGKQT 228
+ +D ++ K T
Sbjct: 129 KRRQRKDSASIDSRKTT 145
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 12/136 (8%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPP--SVSREVDMFELPP 58
A+R+ K A+ ++ K LLK L++Q L + PP V R+ D++ LPP
Sbjct: 128 AKRRQRKDSASIDSRKTTEKLLKTFLKRQALKTAFRSSRHEAPPSLTQVQRQDDIYVLPP 187
Query: 59 APAQTVQDEEEDS--------DSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
P + EE+ D + + + ++DI SE FS+LPP+++HEILT++
Sbjct: 188 LPEEEKHSSEEEDEKQWQARMDQKQALQEEFFHNPQAIDIESEDFSSLPPEVKHEILTDM 247
Query: 111 LE--QRKLSSWHKMHE 124
E +R+ + + M E
Sbjct: 248 KEFTKRRRTLFEAMPE 263
>gi|239609845|gb|EEQ86832.1| DNA excision repair protein Rad2 [Ajellomyces dermatitidis ER-3]
Length = 1166
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 10/100 (10%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDREGNALRNAHIVGFFQRICKLLYFGIKPVFVFDGGAPALKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITE----QMSREAQE 244
TI + ++ R+ G++ A T + Q+ R+A+E
Sbjct: 87 TIVSRKQRRE------GRREDAARTAGKLLAVQIQRKAEE 120
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 60/97 (61%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A ++ M E QELL+LFG+P+I AP EAEAQCA L
Sbjct: 814 EQELRQLRSQQKKDRRDADEVSHIMVSECQELLRLFGLPYITAPMEAEAQCAELLSLGLV 873
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
GV+TDDSDI+LFG VYKN F+ V Y + D+
Sbjct: 874 DGVVTDDSDIFLFGGTRVYKNMFNTVKFVECYLSNDL 910
>gi|261198979|ref|XP_002625891.1| DNA excision repair protein Rad2 [Ajellomyces dermatitidis
SLH14081]
gi|239595043|gb|EEQ77624.1| DNA excision repair protein Rad2 [Ajellomyces dermatitidis
SLH14081]
Length = 1128
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 10/100 (10%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDREGNALRNAHIVGFFQRICKLLYFGIKPVFVFDGGAPALKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITE----QMSREAQE 244
TI + ++ R+ G++ A T + Q+ R+A+E
Sbjct: 87 TIVSRKQRRE------GRREDAARTAGKLLAVQIQRKAEE 120
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 60/97 (61%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A ++ M E QELL+LFG+P+I AP EAEAQCA L
Sbjct: 776 EQELRQLRSQQKKDRRDADEVSHIMVSECQELLRLFGLPYITAPMEAEAQCAELLSLGLV 835
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
GV+TDDSDI+LFG VYKN F+ V Y + D+
Sbjct: 836 DGVVTDDSDIFLFGGTRVYKNMFNTVKFVECYLSNDL 872
>gi|453088882|gb|EMF16922.1| PIN domain-like protein [Mycosphaerella populorum SO2202]
Length = 1387
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLLFF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLFFGIKPVFVFDGGAPALKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLAST-ITEQMSREAQE 244
TI + R+ R R A + QM R A+E
Sbjct: 87 TIRARKSRREG---RREDAVRTAGKLLAVQMQRAAEE 120
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%)
Query: 208 QTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASL 267
Q ++ E++ QL ++ K R A +T+ M +E Q LL+LFG+P++ AP EAEAQCA L
Sbjct: 1006 QNVAEYERELKQLRNQQKKDRRDADEVTQTMIQECQALLRLFGLPYVTAPMEAEAQCAEL 1065
Query: 268 ELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
G++TDDSD +LFG +YKN F++ V Y D+ F
Sbjct: 1066 VHLGLVDGIVTDDSDCFLFGGTRIYKNMFNQAKFVECYLTSDLEKEF 1112
>gi|327350765|gb|EGE79622.1| DNA excision repair protein Rad2 [Ajellomyces dermatitidis ATCC
18188]
Length = 1166
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 10/100 (10%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDREGNALRNAHIVGFFQRICKLLYFGIKPVFVFDGGAPALKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITE----QMSREAQE 244
TI + ++ R+ G++ A T + Q+ R+A+E
Sbjct: 87 TIVSRKQRRE------GRREDAARTAGKLLAVQIQRKAEE 120
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 60/97 (61%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A ++ M E QELL+LFG+P+I AP EAEAQCA L
Sbjct: 814 EQELRQLRSQQKKDRRDADEVSHIMVSECQELLRLFGLPYITAPMEAEAQCAELLSLGLV 873
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
GV+TDDSDI+LFG VYKN F+ V Y + D+
Sbjct: 874 DGVVTDDSDIFLFGGTRVYKNMFNTVKFVECYLSNDL 910
>gi|320580410|gb|EFW94633.1| Single-stranded DNA endonuclease [Ogataea parapolymorpha DL-1]
Length = 1011
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 49/70 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D+ G + N+H++G + RICKLL+F IKPVFVFDGG P LKKQ
Sbjct: 27 LAVDASIWIYQFLKAVRDVQGNQLINSHIVGFFRRICKLLYFGIKPVFVFDGGAPLLKKQ 86
Query: 209 TISTLEKDRD 218
TIS + R+
Sbjct: 87 TISKRREKRE 96
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 57/95 (60%)
Query: 216 DRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQG 275
D QL KQ R A +T +M + Q++L FG+P+I AP EAEAQCA L G
Sbjct: 707 DEVQLQESMKKQKRDADEVTVRMILDIQDMLSRFGLPYITAPMEAEAQCAELLRLGLVDG 766
Query: 276 VITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
+ITDDSD +LFG VYKN F++K+ V Y D+
Sbjct: 767 IITDDSDCFLFGGDRVYKNMFNEKNFVECYQMEDL 801
>gi|308159723|gb|EFO62244.1| Flap structure-specific endonuclease [Giardia lamblia P15]
Length = 361
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 31/191 (16%)
Query: 126 PQNDQHSMLEFRCNIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNA------HLIG 179
P +++ CN VI D S+ L+Q G ++ N+ HL+G
Sbjct: 15 PAAVSKRLIQHYCNKVIA-------IDASVMLYQFITTITSGDGAALANSSGEVTSHLVG 67
Query: 180 LYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR--------------DQLLLERG 225
L ++ ++ IKP+FVFDG P+ K+ LEK R ++ LER
Sbjct: 68 LLAKVIRMAEAGIKPIFVFDGKPPEDKQ---GELEKRRQAREAAELEQQKAEEEGNLERA 124
Query: 226 KQ-TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIW 284
KQ +R +T+Q ++A+ LL + G+P+I+A GEAEAQC ++ +GV + D D+
Sbjct: 125 KQLSRRTVKVTQQHCKQAERLLDVLGIPYIIAAGEAEAQCVAMAKERLCEGVASSDLDVL 184
Query: 285 LFGARTVYKNF 295
FG+ + +N
Sbjct: 185 AFGSPCLIRNL 195
>gi|301121670|ref|XP_002908562.1| DNA repair protein, putative [Phytophthora infestans T30-4]
gi|262103593|gb|EEY61645.1| DNA repair protein, putative [Phytophthora infestans T30-4]
Length = 483
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 58/87 (66%)
Query: 224 RGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDI 283
R +Q R A IT+ M E LL+LFGVPF+V+P EAEAQCA+LE GVITDDSDI
Sbjct: 181 RSRQLRDAEGITDDMVAEVMSLLRLFGVPFLVSPMEAEAQCAALEQLGLVDGVITDDSDI 240
Query: 284 WLFGARTVYKNFFDKKSHVLRYTAPDI 310
+ FG + VYKN F + V ++A DI
Sbjct: 241 FPFGGQRVYKNIFHHQKFVEAFSARDI 267
>gi|444731649|gb|ELW71998.1| Flap endonuclease GEN like protein 1 [Tupaia chinensis]
Length = 793
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 89/175 (50%), Gaps = 9/175 (5%)
Query: 139 NIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVF 198
N+V + VDL S+W+ + T G+V HL L+ RI L +K VFV
Sbjct: 21 NLVGKSIAVDL----SLWVCEAQ--TVKKMIGTVMKPHLRNLFFRISYLTQMDVKLVFVM 74
Query: 199 DGGVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPG 258
+G P+LK IS + R + Q R S + RE ++L+ G+P++ A G
Sbjct: 75 EGEPPKLKADVISKRNQIRYGPSGKTWSQKRGRSQFKSVL-RECLDMLECLGIPWVQAAG 133
Query: 259 EAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
EAEA CA L + G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 134 EAEAMCAYLNACGYVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVDCYTMSCIK 188
>gi|426223166|ref|XP_004005748.1| PREDICTED: flap endonuclease GEN homolog 1 [Ovis aries]
Length = 931
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G+V HL L+ RI L +K VFV +G P LK IS
Sbjct: 50 DLSLWVCEAQ--TVKKMIGTVMKPHLRNLFFRISYLTLMDVKLVFVMEGEPPHLKADVIS 107
Query: 212 TLEKDRDQLLLERGKQT---RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
R+Q+ +T + + + + +E ++L+ G+P++ A GEAEA CA L
Sbjct: 108 ----KRNQVRYGPSGKTWSQKTGRSHFKSVLKECLDMLECLGIPWVQAAGEAEAMCAYLN 163
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
+ G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 164 ASGYVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVDCYTMSSIK 208
>gi|156836721|ref|XP_001642408.1| hypothetical protein Kpol_298p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156112928|gb|EDO14550.1| hypothetical protein Kpol_298p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 1037
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G +V +AH++G + RICKLLF+ IKPVFVFDGGVP LKK TI
Sbjct: 30 DASIWIYQFLKAVRDNKGNAVKDAHIVGFFRRICKLLFYGIKPVFVFDGGVPALKKATIQ 89
Query: 212 TLEKDRDQLLLERGKQTRLAST 233
++ R +GK+ A+T
Sbjct: 90 ERKEKR------QGKRDSAAAT 105
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 58/93 (62%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K R + +T +M QELL FG+P+IVAP EAEAQCA L L G+I
Sbjct: 756 DELFEQQMKDKRDSDEVTPEMVIAVQELLSRFGIPYIVAPMEAEAQCAELLLLKLVDGII 815
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
TDDSD++LFG +YKN F +K +V Y I
Sbjct: 816 TDDSDVFLFGGAKIYKNMFQEKKYVEFYDVQSI 848
>gi|443920093|gb|ELU40082.1| flap structure-specific endonuclease [Rhizoctonia solani AG-1 IA]
Length = 1377
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 69/111 (62%), Gaps = 4/111 (3%)
Query: 204 QLKKQTISTLEKDRDQ----LLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGE 259
QL+ ++ +T+ + D L ER R A +T QMS + Q LL+LFGVPF+ AP E
Sbjct: 911 QLQGKSYATMRESLDAEIAALRKERAAALRDAEDVTAQMSAQIQILLRLFGVPFVNAPME 970
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
AEAQCA L +GVITDDSD++LFGA VY+N F++ V + A D+
Sbjct: 971 AEAQCAFLAQHGLVEGVITDDSDVFLFGAGRVYRNMFNQSKTVECFLAADL 1021
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIWL+Q D G ++ NAH++G R KLLF IKPVFVFDGG P LK+
Sbjct: 46 LAIDSSIWLYQFQATMRDKEGRALVNAHILGFLRRTSKLLFHGIKPVFVFDGGAPVLKRS 105
Query: 209 TISTLEKDRDQLLLERGK-QTRLASTITEQMSREA 242
TI+ +K + K RL + Q+ REA
Sbjct: 106 TIAERKKRKSGAAANHAKVAERL---LAAQLRREA 137
>gi|452824082|gb|EME31087.1| DNA excision repair protein ERCC-5 [Galdieria sulphuraria]
Length = 928
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 64/102 (62%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
EK+R +L E + IT++M E +ELL++ G+P+I AP EAEAQCA
Sbjct: 589 FEKERRELRQEFTHLKSGSDIITDEMCEEIRELLRMLGIPYIQAPMEAEAQCAYFSQVGL 648
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
+GV+T+DSD +LFGA+TV++N F+ K +V +Y DI Y
Sbjct: 649 VEGVVTEDSDAFLFGAKTVFRNIFEDKKYVEQYEMEDIERYL 690
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L DVSIWL Q D G + NAHL+G+ R CKL+F+ + P+FVFDG PQLK++
Sbjct: 27 LAVDVSIWLTQFLYAMRDSEGELIRNAHLLGILRRCCKLIFYNVTPIFVFDGATPQLKRR 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTI 234
T+++ R++ ++ K RLA I
Sbjct: 87 TLNSRRNQRNK---QKVKLRRLAEQI 109
>gi|74197327|dbj|BAC30139.2| unnamed protein product [Mus musculus]
Length = 274
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G + NAHL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDSHGNVIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQT 228
T++ + +D ++ K T
Sbjct: 87 TLAKRRQRKDSASIDSRKTT 106
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPP--SVSREVDMFELPP 58
A+R+ K A+ ++ K LLK L++Q L + PP V R+ D++ LPP
Sbjct: 89 AKRRQRKDSASIDSRKTTEKLLKTFLKRQALKTAFRSSRHEAPPSLTQVQRQDDIYVLPP 148
Query: 59 APAQTVQD------EEEDSDSDDTEA---KFRYADLHSVDINSEQFSALPPDMRHEILTE 109
P + ++ + D +A +F + + ++DI SE FS+LPP+++HEILT+
Sbjct: 149 LPEEEKHSSEEEDEKQWQARMDQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTD 207
Query: 110 LLE 112
+ E
Sbjct: 208 MKE 210
>gi|213404960|ref|XP_002173252.1| DNA-repair protein rad13 [Schizosaccharomyces japonicus yFS275]
gi|212001299|gb|EEB06959.1| DNA-repair protein rad13 [Schizosaccharomyces japonicus yFS275]
Length = 1199
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 61/96 (63%)
Query: 219 QLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
+L + +TR A + ++M RE QELL+ FG+P+IVAP EAEAQCA L GV+T
Sbjct: 807 ELRQSKKNETRDADEVNQEMVRECQELLRYFGLPYIVAPQEAEAQCAKLLELKLVDGVVT 866
Query: 279 DDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
DDSD++LFG +Y+N F++ V Y + D+ F
Sbjct: 867 DDSDVFLFGGTRIYRNMFNQSKFVELYLSSDMERDF 902
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G + ++H++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAIDASIWIYQFLKAVRDKEGEQMKHSHIVGFFRRICKLLYFGIKPVFVFDGGAPMLKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITE-QMSREA 242
TI + R + R TR+A+ I QM + A
Sbjct: 87 TIRKRQARR---ITHREDATRIANKILALQMRKRA 118
>gi|115474331|ref|NP_001060762.1| Os08g0101600 [Oryza sativa Japonica Group]
gi|75162699|sp|Q8W5R1.1|GENL2_ORYSJ RecName: Full=Flap endonuclease GEN-like 2; AltName: Full=OsSEND-1;
AltName: Full=Single-strand DNA endonuclease 1
gi|16923283|dbj|BAB72003.1| single-strand DNA endonuclease-1 [Oryza sativa Japonica Group]
gi|113622731|dbj|BAF22676.1| Os08g0101600 [Oryza sativa Japonica Group]
gi|222639760|gb|EEE67892.1| hypothetical protein OsJ_25722 [Oryza sativa Japonica Group]
Length = 641
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 85/173 (49%), Gaps = 20/173 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT-- 209
D+S WL Q+ A +L L+HRI LL +FV DG +P LK T
Sbjct: 30 DLSCWLVQMYSANRSPAFAK-DKVYLKNLFHRIRALLALNCTLLFVTDGAIPSLKLATYR 88
Query: 210 -----ISTLEKDRDQ------LLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPG 258
IS K+ DQ + L R K + + I +EA+ L G+P +
Sbjct: 89 RRLGSISHAAKESDQPNSHPSISLRRNKGSEFSCMI-----KEAKRLGMALGIPCLDGLE 143
Query: 259 EAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKN-FFDKKSHVLRYTAPDI 310
EAEAQCASL+L + G T DSD +LFGARTVY++ F + +V+ Y DI
Sbjct: 144 EAEAQCASLDLESLCDGCFTSDSDAFLFGARTVYRDVFIGEGGYVICYEMEDI 196
>gi|425769594|gb|EKV08085.1| DNA excision repair protein Rad2 [Penicillium digitatum Pd1]
gi|425771041|gb|EKV09495.1| DNA excision repair protein Rad2 [Penicillium digitatum PHI26]
Length = 1130
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I+PVFVFDGG P +K+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLYFGIRPVFVFDGGAPVMKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLAST-ITEQMSREAQE 244
TI+ +K R+ R R A + QM R A+E
Sbjct: 87 TIAGRKKKREG---HREDAARTAGKLLAVQMQRSAEE 120
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 59/97 (60%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ + R A +T M E Q+LL LFG+P+I AP EAEAQCA L
Sbjct: 788 EQELKQLRSQQRNERRDADEVTTIMINECQQLLALFGLPYITAPMEAEAQCAKLVSLGLV 847
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G++TDDSDI+LFG VYKN F++ V Y D+
Sbjct: 848 DGIVTDDSDIFLFGGTRVYKNMFNQSKFVECYLTSDL 884
>gi|440909937|gb|ELR59789.1| Flap endonuclease GEN-like protein 1, partial [Bos grunniens mutus]
Length = 906
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G+V HL L+ RI L +K VFV +G P LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMIGTVMKPHLRNLFFRISYLTLMDVKLVFVMEGEPPHLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQT---RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
R+Q+ +T + + + + +E ++L+ G+P++ A GEAEA CA L
Sbjct: 88 ----KRNQVRYGPSGKTWSQKTGRSHFKSVLKECLDMLECLGIPWVQAAGEAEAMCAYLN 143
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
+ G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 144 ASGYVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVDCYTMSSIK 188
>gi|451997573|gb|EMD90038.1| hypothetical protein COCHEDRAFT_1106592 [Cochliobolus
heterostrophus C5]
Length = 1297
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 58/100 (58%), Gaps = 10/100 (10%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + R+CKLLF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRVCKLLFIGIKPVFVFDGGAPALKRQ 86
Query: 209 TI----STLEKDRDQLLLERGKQTRLASTITEQMSREAQE 244
TI S E RD L GK + QM R A+E
Sbjct: 87 TIRHRKSRREGRRDDALKTAGK------LLAIQMQRAAEE 120
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 57/96 (59%)
Query: 219 QLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
QL ++ K R A +T+ M E Q+LL LFG+P+I AP EAEAQCA L G++T
Sbjct: 922 QLRAQQKKDRRDADEVTQTMISECQQLLTLFGLPYITAPMEAEAQCAELVNLGLVDGIVT 981
Query: 279 DDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
DDSD +LFG VYKN F+ V Y + D+ F
Sbjct: 982 DDSDTFLFGGTRVYKNMFNAAKFVECYLSSDLTSEF 1017
>gi|367004070|ref|XP_003686768.1| hypothetical protein TPHA_0H01260 [Tetrapisispora phaffii CBS 4417]
gi|357525070|emb|CCE64334.1| hypothetical protein TPHA_0H01260 [Tetrapisispora phaffii CBS 4417]
Length = 1051
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 45/59 (76%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
D SIW++Q K D G SV NAH++G + RICKLL+F +KPVFVFDGGVP LK++TI
Sbjct: 30 DASIWIYQFLKAVRDNEGNSVNNAHIVGFFRRICKLLYFGVKPVFVFDGGVPVLKRETI 88
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D L ++ K R + +T+ M + QELL FG+P+IVAP EAEAQCA L G+I
Sbjct: 770 DDLFEQQVKSKRDSDEVTQDMIKSVQELLTRFGIPYIVAPMEAEAQCAELLKLKLVDGII 829
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRY 305
TDDSD++LFG VYKN F +K++V Y
Sbjct: 830 TDDSDVFLFGGSKVYKNMFHEKNYVEFY 857
>gi|451852103|gb|EMD65398.1| hypothetical protein COCSADRAFT_114116, partial [Cochliobolus
sativus ND90Pr]
Length = 1213
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 58/100 (58%), Gaps = 10/100 (10%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + R+CKLLF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRVCKLLFIGIKPVFVFDGGAPALKRQ 86
Query: 209 TI----STLEKDRDQLLLERGKQTRLASTITEQMSREAQE 244
TI S E RD L GK + QM R A+E
Sbjct: 87 TIRHRKSRREGRRDDALKTAGK------LLAIQMQRAAEE 120
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 57/96 (59%)
Query: 219 QLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
QL ++ K R A +T+ M E Q+LL LFG+P+I AP EAEAQCA L G++T
Sbjct: 923 QLRAQQKKDRRDADEVTQTMISECQQLLALFGLPYITAPMEAEAQCAELVNLGLVDGIVT 982
Query: 279 DDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
DDSD +LFG VYKN F+ V Y + D+ F
Sbjct: 983 DDSDTFLFGGTRVYKNMFNAAKFVECYLSSDLTSEF 1018
>gi|378725893|gb|EHY52352.1| DNA excision repair protein ERCC-5 [Exophiala dermatitidis
NIH/UT8656]
Length = 1319
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 64/108 (59%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+Q I E + QL ++ K R A +T+ M +E Q LL+LFG+P+I AP EAEAQCA
Sbjct: 958 EQAIRDYENELKQLRNQQKKDRRDADDVTQVMVQECQALLRLFGLPYITAPMEAEAQCAE 1017
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
L G++TDDSDI+LFG +YKN F+ V Y A D+ F
Sbjct: 1018 LVRLGLVDGIVTDDSDIFLFGGTRIYKNMFNAAKFVECYLASDLEKEF 1065
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL++ IKPVFVFDGG P LK++
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLYYGIKPVFVFDGGAPILKRE 86
Query: 209 TI 210
TI
Sbjct: 87 TI 88
>gi|258577255|ref|XP_002542809.1| hypothetical protein UREG_02325 [Uncinocarpus reesii 1704]
gi|237903075|gb|EEP77476.1| hypothetical protein UREG_02325 [Uncinocarpus reesii 1704]
Length = 1143
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNAHIVGFFRRICKLLYFGIKPVFVFDGGAPTLKRQ 86
Query: 209 TIST 212
TI++
Sbjct: 87 TIAS 90
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%)
Query: 208 QTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASL 267
+ +++ QL ++ K R A ++ M E Q+LL+LFG+P+I AP EAEAQCA L
Sbjct: 786 ENADAFDRELKQLRAQQKKDRRDADEVSHIMVTECQQLLKLFGLPYITAPMEAEAQCAEL 845
Query: 268 ELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G++TDDSD +LFG VYKN F++ V Y D+
Sbjct: 846 VSLGLVDGIVTDDSDTFLFGGTRVYKNMFNQAKFVECYLVSDL 888
>gi|255943339|ref|XP_002562438.1| Pc18g06110 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587171|emb|CAP94835.1| Pc18g06110 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1083
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I+PVFVFDGG P +K+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLYFGIRPVFVFDGGAPVMKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITE-QMSREAQE 244
TI+ +K R+ R R A + QM R A+E
Sbjct: 87 TIAGRKKRREG---HREDAARTAGKLLAVQMQRSAEE 120
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 59/97 (60%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ + R A +T M E Q+LL LFG+P+I AP EAEAQCA L
Sbjct: 741 EQELKQLRSQQRNERRDADEVTTIMINECQQLLTLFGLPYITAPMEAEAQCAKLVSLGLV 800
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G++TDDSDI+LFG VYKN F++ V Y D+
Sbjct: 801 DGIVTDDSDIFLFGGTRVYKNMFNQSKFVECYLTSDL 837
>gi|195382111|ref|XP_002049775.1| GJ21778 [Drosophila virilis]
gi|317374896|sp|B4LM90.1|FEN1_DROVI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194144572|gb|EDW60968.1| GJ21778 [Drosophila virilis]
Length = 386
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 81/154 (52%), Gaps = 17/154 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G P +HL+G+++R +LL IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLATVNGDPTSHLMGMFYRTIRLLDNGIKPVYVFDGQPPDLK 93
Query: 207 KQTISTLEKDRDQL------LLERG------KQTRLASTITEQMSREAQELLQLFGVPFI 254
++ + R++ E G K R +T++ SREA+ELL+L GVP++
Sbjct: 94 SGELAKRAERREEAEKALKAATEAGDEAEIDKFNRRLVRVTKEHSREAKELLKLMGVPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
AP EAEAQCA+L T+D D FG+
Sbjct: 154 DAPCEAEAQCAALVKAGKVYATATEDMDALTFGS 187
>gi|329664332|ref|NP_001192379.1| flap endonuclease GEN homolog 1 [Bos taurus]
gi|296482355|tpg|DAA24470.1| TPA: flap structure-specific endonuclease-like [Bos taurus]
Length = 906
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G+V HL L+ RI L +K VFV +G P LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMIGTVMKPHLRNLFFRISYLTLMDVKLVFVMEGEPPHLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQT---RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
R+Q+ +T + + + + +E ++L+ G+P++ A GEAEA CA L
Sbjct: 88 ----KRNQVRYGPSGKTWSQKTGRSHFKSVLKECLDMLECLGIPWVQAAGEAEAMCAYLN 143
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
+ G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 144 ASGYVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVDCYTMSSIK 188
>gi|194389372|dbj|BAG61647.1| unnamed protein product [Homo sapiens]
Length = 736
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ N HL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T+ + +D
Sbjct: 87 TLVKRRQRKD 96
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 14/136 (10%)
Query: 2 QRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPP-PSVSREVDMFELPPA 59
+R+ K A+S++ K LLK L++Q + K + ALP V RE D++ LPP
Sbjct: 90 KRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFRSKRDEALPSLTQVRRENDLYVLPPL 149
Query: 60 PAQTVQDEEEDSDSDDT---------EAKFRYADLHSVDINSEQFSALPPDMRHEILTEL 110
+ EE+ + + + +F + + ++DI SE FS+LPP+++HEILT++
Sbjct: 150 QEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTDM 208
Query: 111 LE--QRKLSSWHKMHE 124
E +R+ + + M E
Sbjct: 209 KEFTKRRRTLFEAMPE 224
>gi|365983062|ref|XP_003668364.1| hypothetical protein NDAI_0B00870 [Naumovozyma dairenensis CBS 421]
gi|343767131|emb|CCD23121.1| hypothetical protein NDAI_0B00870 [Naumovozyma dairenensis CBS 421]
Length = 1021
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K R + +T M ++ Q+LL FG+PFIVAP EAEAQCA L N G++
Sbjct: 740 DELYEQQMKDKRDSDEVTPDMVQDVQDLLSRFGIPFIVAPMEAEAQCAELLHLNLVDGIV 799
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
TDDSD++LFG VYKN F +K++V Y + I
Sbjct: 800 TDDSDVFLFGGSKVYKNMFHEKNYVEFYDSASI 832
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G V N+H+ G + RICKLL+F IKPVFVFDGGVP LK++TI
Sbjct: 30 DASIWIYQFLKAVRDENGNKVKNSHITGFFRRICKLLYFGIKPVFVFDGGVPVLKRETI- 88
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQL 248
R + + +GK+ + SR A+++L L
Sbjct: 89 -----RQRREIRQGKR--------DDASRTAKKILAL 112
>gi|255070381|ref|XP_002507272.1| dna-repair protein UVH3 [Micromonas sp. RCC299]
gi|226522547|gb|ACO68530.1| dna-repair protein UVH3 [Micromonas sp. RCC299]
Length = 1108
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 79/143 (55%), Gaps = 8/143 (5%)
Query: 170 GSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQT- 228
G +PN+++ +H F + + + K +T+ + LL GK
Sbjct: 738 GEMPNSNINPCFH-------FAVDAMSDVKSENHRQKLETMLDEARKEHALLQSEGKNAA 790
Query: 229 RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
R A T TE+M + Q+LL LFGVP+++AP EAEAQCA + VIT+DSD +LFGA
Sbjct: 791 RGADTPTEEMYHQIQDLLTLFGVPYVIAPQEAEAQCAWMNSEGLVDAVITEDSDAFLFGA 850
Query: 289 RTVYKNFFDKKSHVLRYTAPDIR 311
TVY+N F+ K +V Y+ +I+
Sbjct: 851 STVYRNVFNTKKYVEVYSVENIQ 873
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIG----LYHRICKLLFFKIKPVFVFDGGVPQLKK 207
D SIWL Q K D G + NAHL+G + RIC++L+ I PVFVFDG P LK+
Sbjct: 30 DASIWLVQFIKAMRDERGDMIHNAHLLGSLFSFFRRICRMLYHGISPVFVFDGATPTLKR 89
Query: 208 QTISTLEKDRDQLLLERGKQTR 229
T+++ R Q +++ Q R
Sbjct: 90 HTVAS----RRQFHVDKALQMR 107
>gi|444316930|ref|XP_004179122.1| hypothetical protein TBLA_0B07870 [Tetrapisispora blattae CBS 6284]
gi|387512162|emb|CCH59603.1| hypothetical protein TBLA_0B07870 [Tetrapisispora blattae CBS 6284]
Length = 1155
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 47/66 (71%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G +V NAH++G + RICKLL+F IKPVF+FDGGVP LKK TI
Sbjct: 30 DASIWIYQFLKAVRDDQGNAVKNAHIVGFFRRICKLLYFGIKPVFIFDGGVPVLKKNTIK 89
Query: 212 TLEKDR 217
++ R
Sbjct: 90 KRKERR 95
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 55/88 (62%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K R + +T M + QELL FG+PFI AP EAEAQCA L G++
Sbjct: 874 DELFEQQMKDKRDSDEVTTDMILDVQELLSRFGIPFITAPMEAEAQCAELINLKLVDGIV 933
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRY 305
TDDSD++LFG VYKN F +K +V Y
Sbjct: 934 TDDSDVFLFGGTKVYKNMFHEKHYVEYY 961
>gi|149237300|ref|XP_001524527.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452062|gb|EDK46318.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1129
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ ++H++G + RICKLLFF I+P+FVFDGGVP LKKQ
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALQSSHIVGFFRRICKLLFFGIRPIFVFDGGVPVLKKQ 86
Query: 209 TISTLEKDRDQLLLERGKQTR---LASTITEQMSRE 241
TI+ K+R Q E ++T LA + +Q+ E
Sbjct: 87 TIAE-RKNRRQQKAESTRETAQKLLAMQLQKQLQGE 121
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 53/85 (62%)
Query: 226 KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWL 285
K R + +TE M + QELL+ FG+PFI AP EAEAQCA L G++TDDSD +L
Sbjct: 855 KAKRDSDEVTETMIYDVQELLKRFGIPFITAPMEAEAQCAELLKIGLVDGIVTDDSDCFL 914
Query: 286 FGARTVYKNFFDKKSHVLRYTAPDI 310
FG VYKN F++K V Y DI
Sbjct: 915 FGGDKVYKNMFNQKQFVECYFKDDI 939
>gi|194756700|ref|XP_001960614.1| GF13444 [Drosophila ananassae]
gi|317374888|sp|B3MDA3.1|FEN1_DROAN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190621912|gb|EDV37436.1| GF13444 [Drosophila ananassae]
Length = 388
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 17/154 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G P +HL+G+++R +LL IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLATVNGDPTSHLMGMFYRTIRLLDNGIKPVYVFDGKPPDLK 93
Query: 207 KQTISTLEKDRDQL------LLERG------KQTRLASTITEQMSREAQELLQLFGVPFI 254
++ + R++ E G K R +T++ +REA+ELL+L GVP++
Sbjct: 94 SGELAKRAERREEAEKALKAATEAGDDAEIEKFNRRLVRVTKEHAREAKELLKLMGVPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
AP EAEAQCA+L T+D D FG+
Sbjct: 154 EAPCEAEAQCAALVKAGKVYATATEDMDALTFGS 187
>gi|320033898|gb|EFW15844.1| DNA excision repair protein [Coccidioides posadasii str. Silveira]
Length = 1143
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNAHVVGFFRRICKLLYFGIKPVFVFDGGAPALKRQ 86
Query: 209 TIST 212
TI++
Sbjct: 87 TIAS 90
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL+LFG+P++ AP EAEAQCA L
Sbjct: 792 ERELKQLRAQQKKDRRDADEVSQIMVAECQQLLKLFGLPYVTAPMEAEAQCAELVSLGLV 851
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G++TDDSDI+LFG +YKN F++ V Y A D+
Sbjct: 852 DGIVTDDSDIFLFGGTRIYKNMFNQAKFVECYLASDL 888
>gi|303310363|ref|XP_003065194.1| XPG N-terminal domain containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240104854|gb|EER23049.1| XPG N-terminal domain containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 1143
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNAHVVGFFRRICKLLYFGIKPVFVFDGGAPALKRQ 86
Query: 209 TIST 212
TI++
Sbjct: 87 TIAS 90
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL+LFG+P++ AP EAEAQCA L
Sbjct: 792 ERELKQLRAQQKKDRRDADEVSQIMVAECQQLLKLFGLPYVTAPMEAEAQCAELVSLGLV 851
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G++TDDSDI+LFG +YKN F++ V Y A D+
Sbjct: 852 DGIVTDDSDIFLFGGTRIYKNMFNQAKFVECYLASDL 888
>gi|296412156|ref|XP_002835792.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629585|emb|CAZ79949.1| unnamed protein product [Tuber melanosporum]
Length = 914
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 66/109 (60%)
Query: 206 KKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCA 265
++QT E++ L +++ K R A +T+ M +E Q+LL LFG+P+I AP EAEAQCA
Sbjct: 523 QQQTREGYERELHTLRVQQAKDRRDADEVTQAMVQECQQLLTLFGIPYITAPMEAEAQCA 582
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
L G++TDDSD +LFG VYKN F++ V Y A D+ +
Sbjct: 583 ELVRLGLVDGIVTDDSDTFLFGGTRVYKNMFNQAKFVECYLAGDLEKEY 631
>gi|119178413|ref|XP_001240880.1| hypothetical protein CIMG_08043 [Coccidioides immitis RS]
gi|392867161|gb|EAS29637.2| DNA excision repair protein (rad2) [Coccidioides immitis RS]
Length = 1142
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNAHVVGFFRRICKLLYFGIKPVFVFDGGAPALKRQ 86
Query: 209 TIST 212
TI++
Sbjct: 87 TIAS 90
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL+LFG+P++ AP EAEAQCA L
Sbjct: 791 ERELKQLRAQQKKDRRDADEVSQIMVAECQQLLKLFGLPYVTAPMEAEAQCAELVSLGLV 850
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G++TDDSDI+LFG +YKN F++ V Y A D+
Sbjct: 851 DGIVTDDSDIFLFGGTRIYKNMFNQAKFVECYLASDL 887
>gi|255721529|ref|XP_002545699.1| hypothetical protein CTRG_00480 [Candida tropicalis MYA-3404]
gi|240136188|gb|EER35741.1| hypothetical protein CTRG_00480 [Candida tropicalis MYA-3404]
Length = 963
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 218 DQLLLER-GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGV 276
+QLL E+ K R + +TE M + QELL+ FG+PFI AP EAEAQCA L G+
Sbjct: 684 EQLLREKLQKAKRDSDEVTEAMINDVQELLRRFGIPFITAPMEAEAQCAELFRIGLVDGI 743
Query: 277 ITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
+TDDSD +LFG +YKN FD+K +V Y D+
Sbjct: 744 VTDDSDCFLFGGDKIYKNMFDQKQYVECYMQDDL 777
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G S+ ++H++G + RICKLL+F I P+FVFDGGVP LK++
Sbjct: 27 LAIDASIWIYQFLKAVRDKDGNSLSSSHIVGFFRRICKLLYFGILPIFVFDGGVPALKRK 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQ 247
TI ++ R++ + + I Q+ REA++ ++
Sbjct: 87 TIVQRKQRREKHSMSTKDTAQKLLAI--QLQREAEKTVK 123
>gi|403217913|emb|CCK72405.1| hypothetical protein KNAG_0K00370 [Kazachstania naganishii CBS
8797]
Length = 979
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 56/88 (63%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D L ++ K R A +T QM + QELL FG+PFIV+P EAEAQCA L N G+I
Sbjct: 697 DDLFDQQVKDKRDADEVTPQMVEDIQELLSRFGIPFIVSPMEAEAQCAELLGLNLVDGII 756
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRY 305
TDDSD++LFG VYKN F + +V Y
Sbjct: 757 TDDSDVFLFGGTKVYKNLFQDRKYVEYY 784
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G ++ N+H+ G + RICKLL+F IKPVFVFDGGVP LK++TI
Sbjct: 30 DASIWIYQFLKAMRDPEGNAIKNSHVTGFFRRICKLLYFGIKPVFVFDGGVPVLKRKTIK 89
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQL 248
+ R +GK+ E +R A++LL L
Sbjct: 90 ARNEAR------QGKR--------ESAARTARKLLAL 112
>gi|19112887|ref|NP_596095.1| DNA repair nuclease Rad13 [Schizosaccharomyces pombe 972h-]
gi|13432230|sp|P28706.2|RAD13_SCHPO RecName: Full=DNA repair protein rad13
gi|3130034|emb|CAA19011.1| DNA repair nuclease Rad13 [Schizosaccharomyces pombe]
Length = 1112
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 64/103 (62%)
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
EK +L ++ + R A +T+ M +E QELL+LFG+P+IVAP EAEAQC+ L
Sbjct: 730 AFEKRLKELKNQKRSEKRDADEVTQVMIKECQELLRLFGLPYIVAPQEAEAQCSKLLELK 789
Query: 272 HTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
G++TDDSD++LFG VY+N F++ V Y D++ F
Sbjct: 790 LVDGIVTDDSDVFLFGGTRVYRNMFNQNKFVELYLMDDMKREF 832
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 137 RCNIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVF 196
+ ++NK L D SIW++Q K D G + ++H++G + RICKLLFF IKPVF
Sbjct: 18 KLETLVNKRLA---IDASIWIYQFLKAVRDKEGNQLKSSHVVGFFRRICKLLFFGIKPVF 74
Query: 197 VFDGGVPQLKKQTI 210
VFDGG P LK+QTI
Sbjct: 75 VFDGGAPSLKRQTI 88
>gi|440633177|gb|ELR03096.1| hypothetical protein GMDG_05935 [Geomyces destructans 20631-21]
Length = 1232
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 65/120 (54%), Gaps = 13/120 (10%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLYFGIKPVFVFDGGAPVLKRQ 86
Query: 209 TI----STLEKDRDQLLLERGK-----QTRLASTITEQMSREAQELLQLFGVPFIVAPGE 259
TI E RD GK R+A E+ +RE +++ G P GE
Sbjct: 87 TILGRKRWREGRRDDATRTAGKLLAMQMQRVAEGAEEKRNRE----IEVRGRPTEAVEGE 142
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 202 VPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAE 261
PQ+ ++ E++ QL ++ K R A ++ M E Q LL+LFG+P+I AP EAE
Sbjct: 849 APQVNQED---YERELKQLRNQQKKDRRDADEVSHIMVTECQALLRLFGLPYITAPMEAE 905
Query: 262 AQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
AQCA L G+ITDDSD++LFG VYKN F+ V Y A D+
Sbjct: 906 AQCAELVTLGLVDGIITDDSDVFLFGGTRVYKNMFNSNKFVECYLASDL 954
>gi|224006438|ref|XP_002292179.1| DNA repair enzyme [Thalassiosira pseudonana CCMP1335]
gi|220971821|gb|EED90154.1| DNA repair enzyme [Thalassiosira pseudonana CCMP1335]
Length = 307
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 229 RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
R STIT++M + ELL+L G+P++ +P EAEAQCA+LE GV+T+DSDI++FG
Sbjct: 8 RDISTITDEMKEDILELLELCGIPWVESPSEAEAQCAALEELGLVDGVVTEDSDIFVFGG 67
Query: 289 RTVYKNFFDKKSHVLRYTAPD 309
R VYKNFF+++ +V Y A D
Sbjct: 68 RKVYKNFFNEQQYVEAYYAKD 88
>gi|242800576|ref|XP_002483617.1| DNA excision repair protein Rad2 [Talaromyces stipitatus ATCC
10500]
gi|218716962|gb|EED16383.1| DNA excision repair protein Rad2 [Talaromyces stipitatus ATCC
10500]
Length = 1128
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 46/64 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLLFF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNAHVVGFFRRICKLLFFGIKPVFVFDGGAPILKRQ 86
Query: 209 TIST 212
TI+
Sbjct: 87 TIAA 90
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
E++ QL ++ K R A +++ M E Q+LL+LFG+P+I AP EAEAQCA L
Sbjct: 802 FEQELKQLRNQQRKDRRDADEVSQIMVSECQQLLRLFGLPYITAPMEAEAQCAELVSLGL 861
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G++TDDSD +LFG VYKN F++ V + + D+
Sbjct: 862 VDGIVTDDSDTFLFGGTRVYKNMFNQSKFVECFLSSDL 899
>gi|159118360|ref|XP_001709399.1| Flap structure-specific endonuclease [Giardia lamblia ATCC 50803]
gi|317374902|sp|A8B672.1|FEN1_GIAIC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|157437515|gb|EDO81725.1| Flap structure-specific endonuclease [Giardia lamblia ATCC 50803]
Length = 361
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 31/191 (16%)
Query: 126 PQNDQHSMLEFRCNIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNA------HLIG 179
P +++ CN VI D S+ L+Q G ++ N+ HL+G
Sbjct: 15 PAAVSKRLIQHYCNKVI-------AIDASVMLYQFITTITSGDGTALANSSGEVTSHLVG 67
Query: 180 LYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR--------------DQLLLERG 225
L ++ +L IKP+FVFDG P+ K+ LEK R ++ LER
Sbjct: 68 LLAKVIRLAEAGIKPIFVFDGKPPEDKQ---GELEKRRQAREAAELEQQKAEEEGNLERA 124
Query: 226 KQ-TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIW 284
KQ +R +T+Q ++A+ LL G+P++VA GEAEAQC ++ +GV + D D+
Sbjct: 125 KQLSRRTVKVTQQHCKQAERLLDTLGIPYVVAAGEAEAQCVAMAKERVCEGVASSDLDVL 184
Query: 285 LFGARTVYKNF 295
FG+ + +N
Sbjct: 185 AFGSPCLIRNL 195
>gi|351699459|gb|EHB02378.1| Flap endonuclease GEN-like protein 1 [Heterocephalus glaber]
Length = 910
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 5/162 (3%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + + + G +V HL L+ R+ L+ I+ VFV +G +LK +S
Sbjct: 30 DLSVWVCE-AQSVRKMVG-TVTKPHLRNLFFRVSHLMQMDIRLVFVMEGEPAKLKAGVMS 87
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
+ R + G Q R + + + RE E+L+ GVP++ A GEAEA CA L
Sbjct: 88 KRNQMRYGPSGKTGSQ-RTGRSRFKLVLRECLEMLECLGVPWVQAAGEAEAMCAHLNGTG 146
Query: 272 HTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
G +TDD D +L+GA+TVY+NF + HV YT I+
Sbjct: 147 RADGCLTDDGDAFLYGAQTVYRNFTMNAQDPHVDCYTMSSIK 188
>gi|403288138|ref|XP_003935270.1| PREDICTED: flap endonuclease GEN homolog 1 [Saimiri boliviensis
boliviensis]
Length = 909
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 85/167 (50%), Gaps = 9/167 (5%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+S+W+ + T GSV HL L+ RI L +K VFV +G P+LK
Sbjct: 27 LAVDLSLWVCEAQ--TVKKMMGSVMKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKAD 84
Query: 209 TISTLEKDRDQLLLERGKQ--TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
IS + R GK + + + + RE ++L+ G+P++ A GEAEA CA
Sbjct: 85 VISKRNQTR---YGSSGKSWSQKTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAY 141
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
L G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 142 LNAVGCVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVDCYTMSSIK 188
>gi|146417652|ref|XP_001484794.1| hypothetical protein PGUG_02523 [Meyerozyma guilliermondii ATCC
6260]
Length = 1035
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 218 DQLLLER-GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGV 276
+Q+L E+ K R + +TE M R+ QELL+ FG+P+I AP EAEAQCA L G+
Sbjct: 754 EQMLQEQYNKAKRDSDEVTETMIRDVQELLKRFGIPYITAPMEAEAQCAELMKLGLVDGI 813
Query: 277 ITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRY 312
ITDDSD +LFG + VYKN F++K +V Y +I +
Sbjct: 814 ITDDSDCFLFGGQKVYKNMFNQKQYVECYFIDEISH 849
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 72/134 (53%), Gaps = 12/134 (8%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G S+P +H++G + RICKLL+F I PVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDSDGNSLPQSHIVGFFRRICKLLYFGILPVFVFDGGAPALKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQ-LFGVPFIVAPGEAEAQCASL 267
TI + R +GK T + ++ + Q+L + L P + GEA A +
Sbjct: 87 TILKRRERR------QGKTESTIETARKLLAIQVQKLAERLKKRPRL--NGEASASASE- 137
Query: 268 ELGNHTQGVITDDS 281
G Q V T D+
Sbjct: 138 --GKTPQSVNTGDT 149
>gi|344305257|gb|EGW35489.1| hypothetical protein SPAPADRAFT_69718 [Spathaspora passalidarum
NRRL Y-27907]
Length = 980
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 65/101 (64%), Gaps = 6/101 (5%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G S+P++H+IG + RICKLL+F I P+FVFDGGVP LK++
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNSLPSSHIIGFFRRICKLLYFGILPIFVFDGGVPVLKRE 86
Query: 209 TISTLEKDRDQLLLERGKQTRLAST--ITEQMSREAQELLQ 247
TI+ + R L++ + TR + + Q+ R+A+ ++
Sbjct: 87 TINARKNRR----LKKAETTRETAQKLLAIQIQRQAENAVK 123
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 210 ISTLEK--DRDQLLLER-GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
IS+LE +QLL E+ K R + +TE M + QELL+ FG+P+I AP EAEAQCA
Sbjct: 687 ISSLETRITEEQLLQEKLQKAKRDSDEVTETMINDVQELLRRFGIPYITAPMEAEAQCAE 746
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
L G+ITDDSD LFG VYKN F++K +V Y DI
Sbjct: 747 LLKIGLVDGIITDDSDCLLFGGDHVYKNMFNQKQYVECYIKDDI 790
>gi|190346361|gb|EDK38425.2| hypothetical protein PGUG_02523 [Meyerozyma guilliermondii ATCC
6260]
Length = 1035
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 218 DQLLLER-GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGV 276
+Q+L E+ K R + +TE M R+ QELL+ FG+P+I AP EAEAQCA L G+
Sbjct: 754 EQMLQEQYNKAKRDSDEVTETMIRDVQELLKRFGIPYITAPMEAEAQCAELMKLGLVDGI 813
Query: 277 ITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRY 312
ITDDSD +LFG + VYKN F++K +V Y +I +
Sbjct: 814 ITDDSDCFLFGGQKVYKNMFNQKQYVECYFIDEISH 849
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 44/62 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G S+P +H++G + RICKLL+F I PVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDSDGNSLPQSHIVGFFRRICKLLYFGILPVFVFDGGAPALKRQ 86
Query: 209 TI 210
TI
Sbjct: 87 TI 88
>gi|311253092|ref|XP_003125389.1| PREDICTED: flap endonuclease GEN homolog 1 [Sus scrofa]
Length = 906
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 13/194 (6%)
Query: 125 MPQNDQHSMLE-FRCNIVINKLLVDLIS-DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYH 182
M ND +LE + +I +N L I+ D+S+W+ + T G+V HL L+
Sbjct: 1 MGVNDLWQVLEPVKQHIHLNSLAGKTIAVDLSLWVCEAQ--TVKKMIGTVMKPHLRNLFF 58
Query: 183 RICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQT---RLASTITEQMS 239
RI L +K VFV +G P+LK I+ R+Q+ +T + + + +
Sbjct: 59 RISCLTLMDVKLVFVMEGEPPKLKADVIN----KRNQIRYGPSGKTWSHKTGRSHFKSVL 114
Query: 240 REAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFF--D 297
+E ++L+ G+P++ A GEAEA CA L G +T+D D +L+GA+TVY+NF
Sbjct: 115 KECLDMLECLGIPWVQAAGEAEAMCAYLNANGCVDGCLTNDGDAFLYGAQTVYRNFTMNT 174
Query: 298 KKSHVLRYTAPDIR 311
K HV YT I+
Sbjct: 175 KDPHVDCYTMSSIK 188
>gi|330917946|ref|XP_003298025.1| hypothetical protein PTT_08606 [Pyrenophora teres f. teres 0-1]
gi|311328997|gb|EFQ93872.1| hypothetical protein PTT_08606 [Pyrenophora teres f. teres 0-1]
Length = 1293
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 48/70 (68%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLLF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLFIGIKPVFVFDGGAPALKRQ 86
Query: 209 TISTLEKDRD 218
TIS + R+
Sbjct: 87 TISNRKSRRE 96
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 57/96 (59%)
Query: 219 QLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
QL ++ K R A +T+ M E Q+LL LFG+P++ AP EAEAQCA L G++T
Sbjct: 922 QLRAQQKKDRRDADEVTQTMIAECQQLLTLFGLPYVTAPMEAEAQCAELVNLGLVDGIVT 981
Query: 279 DDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
DDSD +LFG VYKN F+ V Y A D+ F
Sbjct: 982 DDSDTFLFGGTRVYKNMFNAAKFVECYLAQDLASEF 1017
>gi|281344218|gb|EFB19802.1| hypothetical protein PANDA_002978 [Ailuropoda melanoleuca]
Length = 906
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G+V HL L+ RI L +K VFV +G P+LK I
Sbjct: 30 DLSLWVCEAQ--TVKKMIGTVMKPHLRNLFFRISYLTLMDVKLVFVMEGEPPKLKADVIC 87
Query: 212 TLEKDRDQLLLERGKQT---RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
R+Q+ +T + + + + +E ++L+ G+P++ A GEAEA CA L
Sbjct: 88 R----RNQMRYGPSGKTWSQKTGRSHFKSVLKECLDMLECLGIPWVQAAGEAEAMCAYLN 143
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
+ G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 144 ASGYVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVDCYTMSSIK 188
>gi|296818415|ref|XP_002849544.1| DNA excision repair protein Rad2 [Arthroderma otae CBS 113480]
gi|238839997|gb|EEQ29659.1| DNA excision repair protein Rad2 [Arthroderma otae CBS 113480]
Length = 1066
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 46/64 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLLFF IKPVFVFDGG P LK+Q
Sbjct: 27 LAIDASIWIYQFLKAVRDKEGNALRNAHIVGFFRRICKLLFFGIKPVFVFDGGAPVLKRQ 86
Query: 209 TIST 212
TI+
Sbjct: 87 TIAN 90
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A ++ M E Q+LL+LFG+P+I AP EAEAQCA L
Sbjct: 673 EQELKQLRSQQKKDRRDADEVSHIMVTECQQLLRLFGLPYITAPMEAEAQCAELVSLGLV 732
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
G++TDDSD +LFG +YKN F++ +V Y + D+ +
Sbjct: 733 DGIVTDDSDTFLFGGTRIYKNMFNQSKYVECYLSSDLEKEY 773
>gi|301758368|ref|XP_002915044.1| PREDICTED: flap endonuclease GEN homolog 1-like [Ailuropoda
melanoleuca]
Length = 907
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G+V HL L+ RI L +K VFV +G P+LK I
Sbjct: 30 DLSLWVCEAQ--TVKKMIGTVMKPHLRNLFFRISYLTLMDVKLVFVMEGEPPKLKADVIC 87
Query: 212 TLEKDRDQLLLERGKQT---RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
R+Q+ +T + + + + +E ++L+ G+P++ A GEAEA CA L
Sbjct: 88 R----RNQMRYGPSGKTWSQKTGRSHFKSVLKECLDMLECLGIPWVQAAGEAEAMCAYLN 143
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
+ G +T+D D +L+GA+TVY+NF K HV YT I+
Sbjct: 144 ASGYVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVDCYTMSSIK 188
>gi|315041705|ref|XP_003170229.1| DNA-repair protein rad13 [Arthroderma gypseum CBS 118893]
gi|311345263|gb|EFR04466.1| DNA-repair protein rad13 [Arthroderma gypseum CBS 118893]
Length = 1126
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 46/64 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLLFF IKPVFVFDGG P LK+Q
Sbjct: 27 LAIDASIWIYQFLKAVRDKEGNALRNAHIVGFFRRICKLLFFGIKPVFVFDGGAPILKRQ 86
Query: 209 TIST 212
TI+
Sbjct: 87 TIAN 90
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL+LFG+P+I AP EAEAQCA L
Sbjct: 768 EQELKQLRSQQKKDRRDADEVSQIMVTECQQLLRLFGLPYITAPMEAEAQCAELVALGLV 827
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G++TDDSD +LFG +YKN F++ +V Y + D+
Sbjct: 828 DGIVTDDSDTFLFGGTRIYKNMFNQSKYVECYLSSDL 864
>gi|9587153|gb|AAF89178.1| xeroderma pigmentosum complementation group G protein splice
variant [Homo sapiens]
Length = 232
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ N HL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TISTLEKDRD 218
T+ + +D
Sbjct: 87 TLVKRRQRKD 96
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 14/138 (10%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVL-GKNEMALPPPS-VSREVDMFELPP 58
+R+ K A+S++ K LLK L++Q + K + ALP + V RE D++ LPP
Sbjct: 89 VKRRQRKDLASSDSRKTTEKLLKTFLKRQAIKTAFRSKRDEALPSLTQVRRENDLYVLPP 148
Query: 59 APAQTVQDEEED---------SDSDDTEAKFRYADLHSVDINSEQFSALPPDMRHEILTE 109
+ EE+ + + +F + + ++DI SE FS+LPP+++HEILT+
Sbjct: 149 LQEEEKHSSEEEDEKEWQERMNQKQALQEEF-FHNPQAIDIESEDFSSLPPEVKHEILTD 207
Query: 110 LLE--QRKLSSWHKMHEM 125
+ E +R+ + + M E+
Sbjct: 208 MKEFTKRRRTLFEAMPEV 225
>gi|254581574|ref|XP_002496772.1| ZYRO0D07788p [Zygosaccharomyces rouxii]
gi|238939664|emb|CAR27839.1| ZYRO0D07788p [Zygosaccharomyces rouxii]
Length = 1030
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K R + +T M + Q+LL FGVP+I AP EAEAQCA+L GVI
Sbjct: 750 DELYEQQTKDKRDSDEVTADMITDVQDLLSRFGVPYITAPMEAEAQCATLMRDRLVDGVI 809
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
TDDSD++LFG VYKN F ++++V Y A I
Sbjct: 810 TDDSDVFLFGGNKVYKNMFSERNYVEYYDAESI 842
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G ++ ++H++G + RICKLL+F IKPVFVFDGGVP LK+ TI
Sbjct: 30 DASIWIYQFLKAVRDQEGNALKHSHIVGFFRRICKLLYFGIKPVFVFDGGVPALKQDTIR 89
Query: 212 TLEKDR 217
++ R
Sbjct: 90 QRKERR 95
>gi|145352686|ref|XP_001420669.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580904|gb|ABO98962.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 271
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 52/74 (70%)
Query: 238 MSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFD 297
M R+ QELL LFG+P+I+AP EAEAQCA L VITDDSD++LFGA VY+NFF
Sbjct: 1 MYRDVQELLTLFGIPYIIAPQEAEAQCAYLNQHKLVDAVITDDSDVFLFGASHVYRNFFS 60
Query: 298 KKSHVLRYTAPDIR 311
+K + YTA I+
Sbjct: 61 EKKYCEVYTADRIK 74
>gi|401625605|gb|EJS43605.1| rad2p [Saccharomyces arboricola H-6]
Length = 1034
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K R + +T +M +E QELL FG+P++ AP EAEAQCA L G+I
Sbjct: 754 DELFEQQMKDKRDSDEVTIEMIKEVQELLSRFGIPYVTAPMEAEAQCAELLQLKLVDGII 813
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
TDDSD++LFG VYKN F +K++V Y A I
Sbjct: 814 TDDSDVFLFGGTKVYKNMFHEKNYVEFYDAESI 846
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G +V N+H+ G + RICKLL+F I+PVFVFDGGVP LK++TI
Sbjct: 30 DASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIR 89
Query: 212 TLEKDRDQLLLERGKQTRLAST 233
++ R +GK+ ST
Sbjct: 90 QRKETR------QGKRDNAKST 105
>gi|51013165|gb|AAT92876.1| YGR258C [Saccharomyces cerevisiae]
Length = 1031
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K R + +T M +E QELL G+P+I AP EAEAQCA L N G+I
Sbjct: 751 DELFEQQMKDKRDSDEVTMDMIKEVQELLSRLGIPYITAPMEAEAQCAELLQLNLVDGII 810
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
TDDSD++LFG +YKN F +K++V Y A I
Sbjct: 811 TDDSDVFLFGGTKIYKNMFHEKNYVEFYDAESI 843
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G +V N+H+ G + RICKLL+F I+PVFVFDGGVP LK++TI
Sbjct: 30 DASIWIYQFLKAVRDQEGNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIR 89
Query: 212 TLEKDRDQLLLERGKQT 228
K+R Q E K T
Sbjct: 90 Q-RKERRQGKRESAKST 105
>gi|150865308|ref|XP_001384465.2| hypothetical protein PICST_35911 [Scheffersomyces stipitis CBS
6054]
gi|149386564|gb|ABN66436.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 992
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G S+P +H++G + RICKLL+F I P+FVFDGG P LK++
Sbjct: 27 LAVDASIWIYQFLKAVRDSEGNSLPQSHIVGFFRRICKLLYFGIFPIFVFDGGAPALKRE 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQ 243
TI+ ++R Q E +QT + Q+ REA+
Sbjct: 87 TINQ-RRERRQGQAETTRQT-AQKLLAIQIQREAE 119
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 55/85 (64%)
Query: 226 KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWL 285
K R + +T+ M + QELL+ FG+P+I AP EAEAQCA L G+ITDDSD +L
Sbjct: 716 KSKRDSDEVTQNMITDVQELLRRFGIPYITAPMEAEAQCAELVKIGLVDGIITDDSDCFL 775
Query: 286 FGARTVYKNFFDKKSHVLRYTAPDI 310
FG VYKN F++K +V Y+ D+
Sbjct: 776 FGGTKVYKNMFNQKQYVECYSQDDV 800
>gi|269986761|gb|EEZ93040.1| XPG I domain protein [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 332
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 17/156 (10%)
Query: 156 WLHQLTKGTHDLAGGSV-------PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
W+ Q T LA GS HL GL++R +L +IKPVFVFDG P+ KK+
Sbjct: 31 WIFQFLT-TIRLADGSYLTDSKGKVTTHLNGLFYRSVSMLENRIKPVFVFDGAAPKFKKE 89
Query: 209 TISTLEKDRDQLLL---------ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGE 259
T+ EK +++ + E+ R S I + + ++ELL G+P++ AP E
Sbjct: 90 TLKEREKTKEEAIEKMQNASTAEEKAMYMRRLSRIDDYIIDSSKELLSYLGIPYVQAPAE 149
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
EAQ A L + + D D LFGA+ V +N
Sbjct: 150 GEAQAAQLNMQGKVFAAASQDYDTLLFGAKKVVRNL 185
>gi|406604494|emb|CCH44056.1| DNA repair protein [Wickerhamomyces ciferrii]
Length = 1010
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 55/82 (67%)
Query: 229 RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
R + +T M +E QELL FG+P+I AP EAEAQCA L N G+ITDDSD++LFG
Sbjct: 734 RDSDEVTVTMIKEVQELLARFGIPYITAPMEAEAQCAELLQLNLVDGIITDDSDVFLFGG 793
Query: 289 RTVYKNFFDKKSHVLRYTAPDI 310
VYKN F +K +V Y++ DI
Sbjct: 794 GKVYKNMFHEKHYVEFYSSQDI 815
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 48/66 (72%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D +G S+ ++H++G + RICKLL+F I PVFVFDGG P LK++TI+
Sbjct: 30 DASIWIYQFLKAVRDKSGNSLTSSHIVGFFRRICKLLYFGIMPVFVFDGGAPVLKRETIN 89
Query: 212 TLEKDR 217
++ R
Sbjct: 90 KRKERR 95
>gi|393908823|gb|EFO27494.2| hypothetical protein LOAG_00986 [Loa loa]
Length = 880
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 55/81 (67%)
Query: 230 LASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGAR 289
AST E + ++ Q+LL++ G+P+++APGEAEAQC LE G+I+DDSD+W FGA
Sbjct: 487 FASTREEGVYKDCQDLLRICGIPYVIAPGEAEAQCCELERLGLVHGIISDDSDVWSFGAA 546
Query: 290 TVYKNFFDKKSHVLRYTAPDI 310
VYKN F++K + Y+ I
Sbjct: 547 MVYKNMFNQKRRLQMYSMETI 567
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 149 LISDVSIWLHQLTKG-THDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDG-GVPQLK 206
L D+SIWLHQ G + P HL + R+ KLLF+KI+P+FVFDG VP K
Sbjct: 27 LAVDISIWLHQAAYGYSEHQHNARYP--HLSLVLRRLAKLLFYKIRPLFVFDGPNVPIFK 84
Query: 207 KQTISTLEKDR--DQLLLERGKQ---TRLASTITEQMSREAQELLQLF 249
++ + + R ++L + + ++ +LAS+ + EL ++F
Sbjct: 85 RKLLRDRQVKRYVEELTMTKAQKHVLQQLASSQLHGGEQRVNELSEVF 132
>gi|367044124|ref|XP_003652442.1| hypothetical protein THITE_2113945 [Thielavia terrestris NRRL 8126]
gi|346999704|gb|AEO66106.1| hypothetical protein THITE_2113945 [Thielavia terrestris NRRL 8126]
Length = 1226
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 64/105 (60%)
Query: 206 KKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCA 265
+++ E++ L ++ K R A +T+ M E Q LL+LFG+P+I AP EAEAQCA
Sbjct: 839 QRENQEAYEQELRALRAQQKKDRRDADEVTQVMITECQALLRLFGIPYITAPMEAEAQCA 898
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
L N G++TDDSDI+LFG VYKN F+ +V Y A D+
Sbjct: 899 ELVRLNLVDGIVTDDSDIFLFGGTRVYKNVFNSNKYVECYLATDL 943
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL++ +KPVFVFDGG P LK+
Sbjct: 27 LAIDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWYGVKPVFVFDGGAPALKRA 86
Query: 209 TI 210
T+
Sbjct: 87 TL 88
>gi|300707184|ref|XP_002995811.1| hypothetical protein NCER_101198 [Nosema ceranae BRL01]
gi|239605030|gb|EEQ82140.1| hypothetical protein NCER_101198 [Nosema ceranae BRL01]
Length = 265
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 93/182 (51%), Gaps = 15/182 (8%)
Query: 139 NIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVF 198
+ K+ +D+ + + +L + G + L G +HL+G+++R +++ + P+FVF
Sbjct: 25 SFAFKKVAIDISNFIYQFLIAVRSGGNALGYGDTTTSHLVGMFYRTIRIVESGVTPIFVF 84
Query: 199 DGGVPQLK----KQTISTLEKDRDQLLL--------ERGKQTRLASTITEQMSREAQELL 246
DG P+LK K+ +K +QL L E KQT+ ++E+ + + LL
Sbjct: 85 DGKPPELKLYELKKRSDRRDKAEEQLKLAMEAEDKAEIEKQTKRKIKVSEEHVNDCKRLL 144
Query: 247 QLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFD---KKSHVL 303
+L G+P++ AP EAEA CA L V T+D D FGA + + F KK+HV
Sbjct: 145 KLMGIPYLTAPSEAEAFCAYLCKVKCVDAVATEDMDALPFGAPVLLRGFSSAAVKKTHVT 204
Query: 304 RY 305
Y
Sbjct: 205 EY 206
>gi|312067080|ref|XP_003136574.1| hypothetical protein LOAG_00986 [Loa loa]
Length = 882
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 55/81 (67%)
Query: 230 LASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGAR 289
AST E + ++ Q+LL++ G+P+++APGEAEAQC LE G+I+DDSD+W FGA
Sbjct: 489 FASTREEGVYKDCQDLLRICGIPYVIAPGEAEAQCCELERLGLVHGIISDDSDVWSFGAA 548
Query: 290 TVYKNFFDKKSHVLRYTAPDI 310
VYKN F++K + Y+ I
Sbjct: 549 MVYKNMFNQKRRLQMYSMETI 569
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 149 LISDVSIWLHQLTKG-THDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDG-GVPQLK 206
L D+SIWLHQ G + P HL + R+ KLLF+KI+P+FVFDG VP K
Sbjct: 27 LAVDISIWLHQAAYGYSEHQHNARYP--HLSLVLRRLAKLLFYKIRPLFVFDGPNVPIFK 84
Query: 207 KQTISTLEKDR--DQLLLERGKQ---TRLASTITEQMSREAQELLQLF 249
++ + + R ++L + + ++ +LAS+ + EL ++F
Sbjct: 85 RKLLRDRQVKRYVEELTMTKAQKHVLQQLASSQLHGGEQRVNELSEVF 132
>gi|291387124|ref|XP_002710085.1| PREDICTED: Gen homolog 1, endonuclease [Oryctolagus cuniculus]
Length = 904
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S+W+ + T G+V HL L+ RI L+ +K VFV +G P+LK IS
Sbjct: 30 DLSLWVCEAQ--TVKKMIGTVMKPHLRNLFFRISYLMQMDVKLVFVMEGEPPKLKADVIS 87
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMS---REAQELLQLFGVPFIVAPGEAEAQCASLE 268
R+Q+ +T T RE +LL G+P++ A GEAEA CA L
Sbjct: 88 K----RNQIRYGSSGKTLSQQTGRSHFKLVLRECLDLLDCLGIPWVQAAGEAEAMCAYLN 143
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
+ G +T+D D +L+GA+TVY+NF K HV Y+ I+
Sbjct: 144 AEGYVDGCLTNDGDAFLYGAQTVYRNFTMNVKDPHVDCYSMSSIK 188
>gi|195431204|ref|XP_002063637.1| GK21315 [Drosophila willistoni]
gi|317374897|sp|B4MR84.1|FEN1_DROWI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194159722|gb|EDW74623.1| GK21315 [Drosophila willistoni]
Length = 388
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 28/171 (16%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G P +HL+G+++R +LL IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLATVNGDPTSHLMGMFYRTIRLLDNGIKPVYVFDGKPPDLK 93
Query: 207 KQTISTLEKDRDQL------LLERG------KQTRLASTITEQMSREAQELLQLFGVPFI 254
++ + R++ E G K R +T++ +REA+ELL+L GVP++
Sbjct: 94 SGELAKRAERREEAEKALKAATEAGDEAEIEKFNRRLVRVTKEHAREAKELLKLMGVPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
AP EAEAQCA+L T+D D FG+ S +LRY
Sbjct: 154 DAPCEAEAQCAALVKAGKVYATATEDMDALTFGS-----------SKLLRY 193
>gi|296224442|ref|XP_002758061.1| PREDICTED: flap endonuclease GEN homolog 1 [Callithrix jacchus]
Length = 909
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+S+W+ + T GSV HL L+ RI L +K VFV +G P+LK
Sbjct: 27 LAVDLSLWVCEAQ--TVKKMMGSVMKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKAD 84
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
IS + R + Q + + + + RE ++L+ G+P++ A GEAEA CA L
Sbjct: 85 VISKRNQTRYGFSGKSWSQ-KTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAYLN 143
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
G +T+D D +L+GA+TVY+NF K HV Y I+
Sbjct: 144 AVGRVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVDCYKMSSIK 188
>gi|345571348|gb|EGX54162.1| hypothetical protein AOL_s00004g195 [Arthrobotrys oligospora ATCC
24927]
Length = 1248
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 65/108 (60%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+Q E++ L ++ K R A +T+ M E Q+LLQ+FG+P+I AP EAEAQCA
Sbjct: 839 EQNAMDYERELRTLRDQQKKDRRDADEVTKIMITECQQLLQMFGIPYITAPMEAEAQCAE 898
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
L G++TDDSDI+LFG VYKN F++ +V Y A D+ +
Sbjct: 899 LVNLGLVDGIVTDDSDIFLFGGTRVYKNMFNQAKYVECYLASDLENEY 946
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RI KLLF I+PVFVFDGG P LK+Q
Sbjct: 27 LAIDASIWIYQFLKAVRDKEGNALRNAHVVGFFRRIVKLLFHGIRPVFVFDGGAPLLKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQE 244
TI+ + R L+ + +I QM + A+E
Sbjct: 87 TIANRKSHRQDRKLDASNTAKKLLSI--QMQKRAKE 120
>gi|348681509|gb|EGZ21325.1| hypothetical protein PHYSODRAFT_455731 [Phytophthora sojae]
Length = 502
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 57/87 (65%)
Query: 224 RGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDI 283
R +Q R IT+ M E LL+LFGVPF+V+P EAEAQCA+LE GVITDDSDI
Sbjct: 195 RSRQLRDTEGITDDMVAEVMALLRLFGVPFLVSPMEAEAQCAALEQLGLVDGVITDDSDI 254
Query: 284 WLFGARTVYKNFFDKKSHVLRYTAPDI 310
+ FG + VYKN F + V ++A DI
Sbjct: 255 FPFGGQRVYKNIFHHQKFVEAFSARDI 281
>gi|189202272|ref|XP_001937472.1| DNA-repair protein rad13 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187984571|gb|EDU50059.1| DNA-repair protein rad13 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1222
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 48/70 (68%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + R+CKLLF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRVCKLLFIGIKPVFVFDGGAPALKRQ 86
Query: 209 TISTLEKDRD 218
TIS + R+
Sbjct: 87 TISNRKSRRE 96
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 57/96 (59%)
Query: 219 QLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
QL ++ K R A +T+ M E Q+LL LFG+P+I AP EAEAQCA L G++T
Sbjct: 920 QLRAQQKKDRRDADEVTQTMIAECQQLLTLFGLPYITAPMEAEAQCAELVNLGLVDGIVT 979
Query: 279 DDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
DDSD +LFG VYKN F+ V Y A D+ F
Sbjct: 980 DDSDTFLFGGTRVYKNMFNAAKFVECYLAQDLTSEF 1015
>gi|366994113|ref|XP_003676821.1| hypothetical protein NCAS_0E03950 [Naumovozyma castellii CBS 4309]
gi|342302688|emb|CCC70465.1| hypothetical protein NCAS_0E03950 [Naumovozyma castellii CBS 4309]
Length = 1000
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 61/93 (65%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K+ R + +T +M ++ QELL FGVP+I AP EAEAQCA L GV+
Sbjct: 720 DELYKQQVKEKRDSDEVTPEMIQDVQELLSRFGVPYITAPMEAEAQCAELLQLKLVDGVV 779
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
TDDSD++LFG +YKN F +K++V Y + I
Sbjct: 780 TDDSDVFLFGGSKIYKNMFHEKNYVEFYDSESI 812
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 42/59 (71%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
D SIW++Q K D G V N+H+ G + RICKLL+F I+PVFVFDGGVP LK+ TI
Sbjct: 30 DASIWIYQFMKAVRDQDGNRVSNSHITGFFRRICKLLYFGIQPVFVFDGGVPALKRDTI 88
>gi|302507858|ref|XP_003015890.1| hypothetical protein ARB_06202 [Arthroderma benhamiae CBS 112371]
gi|291179458|gb|EFE35245.1| hypothetical protein ARB_06202 [Arthroderma benhamiae CBS 112371]
Length = 1120
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 46/64 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAIDASIWIYQFLKAVRDKEGNALRNAHIVGFFRRICKLLYFGIKPVFVFDGGAPILKRQ 86
Query: 209 TIST 212
TI+
Sbjct: 87 TIAN 90
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL+LFG+P+I AP EAEAQCA L
Sbjct: 767 EQELKQLRSQQKKDRRDADEVSQIMVTECQQLLRLFGLPYITAPMEAEAQCAELVALGLV 826
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
G++TDDSD +LFG +YKN F++ +V Y + D+ +
Sbjct: 827 DGIVTDDSDTFLFGGTRIYKNMFNQSKYVECYLSSDLEKEY 867
>gi|119468577|ref|XP_001257869.1| DNA excision repair protein Rad2 [Neosartorya fischeri NRRL 181]
gi|119406021|gb|EAW15972.1| DNA excision repair protein Rad2 [Neosartorya fischeri NRRL 181]
Length = 1132
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLYFGIKPVFVFDGGAPALKRQ 86
Query: 209 TIS 211
TI+
Sbjct: 87 TIA 89
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 60/97 (61%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +T+ M E Q+LL LFG+P+I AP EAEAQCA L
Sbjct: 777 EQELRQLRSQQKKDRRDADEVTQVMITECQQLLSLFGLPYITAPMEAEAQCAELVSLGLV 836
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G+ITDDSDI+LFG VYKN F++ V Y D+
Sbjct: 837 DGIITDDSDIFLFGGTRVYKNMFNQGKFVECYLTSDM 873
>gi|302665120|ref|XP_003024173.1| hypothetical protein TRV_01672 [Trichophyton verrucosum HKI 0517]
gi|291188218|gb|EFE43562.1| hypothetical protein TRV_01672 [Trichophyton verrucosum HKI 0517]
Length = 1120
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 46/64 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAIDASIWIYQFLKAVRDKEGNALRNAHIVGFFRRICKLLYFGIKPVFVFDGGAPILKRQ 86
Query: 209 TIST 212
TI+
Sbjct: 87 TIAN 90
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL+LFG+P+I AP EAEAQCA L
Sbjct: 767 EQELKQLRSQQKKDRRDADEVSQIMVTECQQLLRLFGLPYITAPMEAEAQCAELVALGLV 826
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
G++TDDSD +LFG +YKN F++ +V Y + D+ +
Sbjct: 827 DGIVTDDSDTFLFGGTRIYKNMFNQSKYVECYLSSDLEKEY 867
>gi|254656361|gb|ACT76275.1| excision repair cross-complementing rodent repair deficiency
complementation group 5, partial [Sebastiscus
marmoratus]
Length = 228
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+SIWL+Q KG D G S+ NAHL+ L++RICKLLFF I+PVFVF G P LKKQT++
Sbjct: 37 DISIWLNQAVKGVRDREGNSMQNAHLLTLFNRICKLLFFHIRPVFVFGGDAPLLKKQTLA 96
Query: 212 TLEKDRDQLLLERGKQT 228
+ + R + L + KQT
Sbjct: 97 -VRRQRKEELSQESKQT 112
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 19/130 (14%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPPPSVSR----EVD-MFE 55
A R+ K + + + + LLK L++Q + LG M P PS+S EVD M+
Sbjct: 96 AVRRQRKEELSQESKQTNEKLLKTFLKRQAIKAALGDRSMD-PLPSLSTVRRDEVDDMYV 154
Query: 56 LPPAPAQTVQDEEEDSDSDDTEAKFR-------------YADLHSVDINSEQFSALPPDM 102
LP PA +D+ + ++ + D +SVDINSE+F++LPP+M
Sbjct: 155 LPALPAAEEKDKSSSEEEEEERESEEEAEDGYHMYQGESHGDPNSVDINSEEFASLPPEM 214
Query: 103 RHEILTELLE 112
+HEIL E+ E
Sbjct: 215 KHEILKEMKE 224
>gi|367016309|ref|XP_003682653.1| hypothetical protein TDEL_0G00750 [Torulaspora delbrueckii]
gi|359750316|emb|CCE93442.1| hypothetical protein TDEL_0G00750 [Torulaspora delbrueckii]
Length = 1012
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G ++ N+H++G + RICKLL+F IKPVFVFDGGVP LK+ TI
Sbjct: 30 DASIWIYQFLKAVRDQEGNALKNSHIVGFFRRICKLLYFGIKPVFVFDGGVPALKRSTIQ 89
Query: 212 TLEKDR 217
++ R
Sbjct: 90 QRKERR 95
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 58/94 (61%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K R + +T M E Q+LL FG+PFI AP EAEAQCA L G+I
Sbjct: 732 DELFEQQMKDKRDSDEVTTDMIVEVQDLLSRFGIPFITAPMEAEAQCAELLGLKLVDGII 791
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
TDDSD++LFG VYKN F +K++V Y I+
Sbjct: 792 TDDSDVFLFGGSRVYKNMFHEKNYVEFYDYQSIK 825
>gi|310790037|gb|EFQ25570.1| DNA excision repair protein [Glomerella graminicola M1.001]
Length = 1271
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWFGIKPVFVFDGGAPALKRQ 86
Query: 209 TISTLEKDRDQLLLERGKQTRLAST-ITEQMSREAQE 244
TI ++ R+ R R A + QM R A+E
Sbjct: 87 TIQGRKQRREG---RREDAVRTAGKLLAVQMQRIAEE 120
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 58/97 (59%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ L ++ K R A +T+ M E Q LL+LFG+P+I AP EAEAQCA L
Sbjct: 911 ERELKALRTQQKKDRRDADEVTQVMVTECQALLRLFGIPYITAPMEAEAQCAELVQLGLV 970
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G++TDDSD +LFG +YKN F+ V Y + D+
Sbjct: 971 DGIVTDDSDCFLFGGTRIYKNMFNSNKFVECYLSSDL 1007
>gi|361129990|gb|EHL01866.1| putative DNA repair protein rad13 [Glarea lozoyensis 74030]
Length = 1157
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 61/103 (59%)
Query: 208 QTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASL 267
++ + EK+ L ++ K R A +T M++E Q LL+ FG+P+I+APGEAEAQCA L
Sbjct: 750 ESQAAYEKELKALRNQQKKDRRDADDVTSAMNQECQILLKKFGIPYIIAPGEAEAQCAEL 809
Query: 268 ELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G ITDD DI+LFG VYKN F+ V Y DI
Sbjct: 810 VRQGLVDGAITDDCDIFLFGGTRVYKNLFNSNKDVECYLQKDI 852
>gi|115390695|ref|XP_001212852.1| hypothetical protein ATEG_03674 [Aspergillus terreus NIH2624]
gi|114193776|gb|EAU35476.1| hypothetical protein ATEG_03674 [Aspergillus terreus NIH2624]
Length = 1131
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 46/64 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLLFF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLFFGIKPVFVFDGGAPILKRQ 86
Query: 209 TIST 212
TI+
Sbjct: 87 TIAA 90
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 60/97 (61%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL LFG+P+I AP EAEAQCA L
Sbjct: 802 EQELKQLRSQQKKDRRDADEVSQIMISECQQLLTLFGLPYITAPMEAEAQCAELVSLGLV 861
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G+ITDDSDI+LFG VYKN F++ V Y D+
Sbjct: 862 DGIITDDSDIFLFGGTRVYKNMFNQSKFVECYLTSDL 898
>gi|410926473|ref|XP_003976703.1| PREDICTED: flap endonuclease GEN homolog 1-like [Takifugu rubripes]
Length = 827
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 80/154 (51%), Gaps = 16/154 (10%)
Query: 149 LISDVSIWLHQLTKGTHDLAG-GSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK 207
L D+S+W+ + H A G V HL L+ R+ L IK VFV +G P++K
Sbjct: 27 LAVDLSLWV---CEAQHVQAMMGRVNKPHLRNLFFRVSSLTLMGIKLVFVMEGEAPKIKA 83
Query: 208 QTISTLEKDRDQLLLERGKQTRLASTITEQMSR------EAQELLQLFGVPFIVAPGEAE 261
+T+S + L G + +ST + R E ++L + GVP++ A GEAE
Sbjct: 84 ETMS------KRTLARYGGFKKTSSTTSTGRGRFKAVLKECADMLDILGVPWVTAAGEAE 137
Query: 262 AQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
A CA L+ G IT+D D +L+GA+ VY+NF
Sbjct: 138 AMCAFLDSQGLVDGCITNDGDAFLYGAQIVYRNF 171
>gi|380472104|emb|CCF46946.1| DNA-repair protein rad13, partial [Colletotrichum higginsianum]
Length = 794
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWFGIKPVFVFDGGAPTLKRQ 86
Query: 209 TISTLEKDRD 218
TI ++ R+
Sbjct: 87 TIQGRKQRRE 96
>gi|327298531|ref|XP_003233959.1| DNA excision repair protein [Trichophyton rubrum CBS 118892]
gi|326464137|gb|EGD89590.1| DNA excision repair protein [Trichophyton rubrum CBS 118892]
Length = 1121
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAIDASIWIYQFLKAVRDKEGNALRNAHIVGFFRRICKLLYFGIKPVFVFDGGAPILKRQ 86
Query: 209 TIS 211
TI+
Sbjct: 87 TIA 89
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL+LFG+P+I AP EAEAQCA L
Sbjct: 768 EQELKQLRSQQKKDRRDADEVSQIMVTECQQLLRLFGLPYITAPMEAEAQCAELVTLGLV 827
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G++TDDSD +LFG +YKN F++ +V Y + D+
Sbjct: 828 DGIVTDDSDTFLFGGTRIYKNMFNQSKYVECYLSSDL 864
>gi|157169412|ref|XP_001651504.1| flap endonuclease-1 [Aedes aegypti]
gi|122094730|sp|Q178M1.1|FEN1_AEDAE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|108878396|gb|EAT42621.1| AAEL005870-PA [Aedes aegypti]
Length = 380
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 17/161 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q +G + +HL+G ++R +LL IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRAEGAQLTSVDGETTSHLMGTFYRTIRLLENGIKPVYVFDGKPPDLK 93
Query: 207 KQTISTLEKDRDQLLLERGKQTRLAST------------ITEQMSREAQELLQLFGVPFI 254
++ + R++ K T T +T+Q S EA+ELL+L GVP++
Sbjct: 94 SGELTKRAEKREEAQKALDKATEAGVTEDIDKFNRRLVKVTKQHSNEAKELLKLMGVPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
AP EAEAQCA+L G T+D D FG+ + ++
Sbjct: 154 DAPCEAEAQCAALVKGGKVYATATEDMDALTFGSNILLRHL 194
>gi|406864117|gb|EKD17163.1| DNA excision repair protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1423
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 45/62 (72%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H+IG + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVIGFFRRICKLLYFGIKPVFVFDGGAPVLKRQ 86
Query: 209 TI 210
T+
Sbjct: 87 TV 88
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 60/100 (60%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
++ E++ L ++ K R A +T M E Q LL+LFG+P+I AP EAEAQCA L
Sbjct: 974 ASYERELKALRNQQKKDRRDADEVTTVMISECQALLRLFGLPYITAPMEAEAQCAELVNL 1033
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
GV+TDD DI+LFG VYKN F+ +V Y A DI
Sbjct: 1034 GLVDGVVTDDCDIFLFGGTRVYKNMFNSNKYVECYLASDI 1073
>gi|326474654|gb|EGD98663.1| DNA excision repair protein [Trichophyton tonsurans CBS 112818]
Length = 1119
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 46/64 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAIDASIWIYQFLKAVRDKEGNALRNAHIVGFFRRICKLLYFGIKPVFVFDGGAPILKRQ 86
Query: 209 TIST 212
TI+
Sbjct: 87 TIAN 90
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL+LFG+P+I AP EAEAQCA L
Sbjct: 766 EQELKQLRSQQKKDRRDADEVSQIMVTECQQLLRLFGLPYITAPMEAEAQCAELVTLGLV 825
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
G++TDDSD +LFG +YKN F++ +V Y + D+ +
Sbjct: 826 DGIVTDDSDTFLFGGTRIYKNMFNQSKYVECYLSSDLEKEY 866
>gi|326482848|gb|EGE06858.1| DNA-repair protein rad13 [Trichophyton equinum CBS 127.97]
Length = 1119
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 46/64 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ NAH++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAIDASIWIYQFLKAVRDKEGNALRNAHIVGFFRRICKLLYFGIKPVFVFDGGAPILKRQ 86
Query: 209 TIST 212
TI+
Sbjct: 87 TIAN 90
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL+LFG+P+I AP EAEAQCA L
Sbjct: 766 EQELKQLRSQQKKDRRDADEVSQIMVTECQQLLRLFGLPYITAPMEAEAQCAELVTLGLV 825
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
G++TDDSD +LFG +YKN F++ +V Y + D+ +
Sbjct: 826 DGIVTDDSDTFLFGGTRIYKNMFNQSKYVECYLSSDLEKEY 866
>gi|198477405|ref|XP_002136633.1| GA27689 [Drosophila pseudoobscura pseudoobscura]
gi|317374893|sp|B5DUR8.1|FEN1_DROPS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|198142925|gb|EDY71637.1| GA27689 [Drosophila pseudoobscura pseudoobscura]
Length = 386
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 17/154 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G P +HL+G+++R +LL IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLATVNGDPTSHLMGMFYRTIRLLDNGIKPVYVFDGKPPDLK 93
Query: 207 KQTISTLEKDRDQLL------------LERGKQTRLASTITEQMSREAQELLQLFGVPFI 254
++ + R++ E K R +T++ +REA+ELL L GVP++
Sbjct: 94 SGELAKRAERREEAEKALKAATDAGDDAEIEKFNRRLVRVTKEHAREAKELLSLMGVPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
AP EAEAQCA+L T+D D FG+
Sbjct: 154 DAPCEAEAQCAALVKAGKVYATATEDMDALTFGS 187
>gi|340709477|ref|XP_003393334.1| PREDICTED: flap endonuclease GEN-like [Bombus terrestris]
Length = 725
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S W+ T A P +L LY R LL I PVFV +G P LK +TI+
Sbjct: 30 DMSCWIVDSQTVTDHSAQ---PKMYLRNLYFRTAFLLMQGISPVFVLEGKAPTLKHKTIA 86
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
D E+ ++ T ++ E +E+LQL G+ + GEAEA CA L
Sbjct: 87 K-RNDVRSGFREKKTASKGGRTQFNRILNECKEMLQLMGLACVQGHGEAEAMCAYLNEDG 145
Query: 272 HTQGVITDDSDIWLFGARTVYKNF 295
G I+ DSD +L+GA+TVY+NF
Sbjct: 146 LVDGCISQDSDCFLYGAKTVYRNF 169
>gi|403216014|emb|CCK70512.1| hypothetical protein KNAG_0E02520 [Kazachstania naganishii CBS
8797]
Length = 380
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 15/150 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNA------HLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q GG + +A HL+G+++R +++ IKP +VFDG P L
Sbjct: 34 DASMSLYQFLIAVRQQDGGQLTDAEGGTTSHLMGMFYRTLRMVDNGIKPCYVFDGAPPAL 93
Query: 206 KKQTISTLEKDRDQL---------LLERGKQTRLASTITEQMSREAQELLQLFGVPFIVA 256
K+ + + R + L E+ KQ R ++++ + EA++LL L GVP++ A
Sbjct: 94 KQHELGKRTQRRAETEQRLKEATDLAEKAKQERRLVKVSKEHNEEAKKLLGLMGVPYVDA 153
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLF 286
PGEAEAQCA L G ++D D +
Sbjct: 154 PGEAEAQCAELAKGGKVYAAASEDMDTLCY 183
>gi|67538092|ref|XP_662820.1| hypothetical protein AN5216.2 [Aspergillus nidulans FGSC A4]
gi|40743207|gb|EAA62397.1| hypothetical protein AN5216.2 [Aspergillus nidulans FGSC A4]
gi|259484675|tpe|CBF81100.1| TPA: single-stranded DNA endonuclease (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 1141
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 62/97 (63%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +T+ M E Q+LL+LFG+P+I AP EAEAQCA L
Sbjct: 784 EQELKQLRSQQKKDRRDADEVTQIMITECQQLLRLFGLPYITAPMEAEAQCAELVSLGLV 843
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G+ITDDSDI+LFG VYKN F++ +V Y D+
Sbjct: 844 DGIITDDSDIFLFGGTRVYKNMFNQSKYVECYLTADL 880
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLYFGIKPVFVFDGGAPVLKRQ 86
Query: 209 TIST 212
TI+
Sbjct: 87 TIAN 90
>gi|395509172|ref|XP_003758878.1| PREDICTED: uncharacterized protein LOC100916082 [Sarcophilus
harrisii]
Length = 978
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+S+W+ + + G V HL L+ RI L ++K +FV +G P+LK
Sbjct: 27 LAVDLSLWVCEALAVKKMV--GIVVKPHLRNLFFRISSLTLMEVKLLFVMEGDAPKLKAD 84
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
+ +++ + + + + + + + +E +LL+ GVP++ A GEAEA CA L+
Sbjct: 85 VMG--KRNETRFGAPQNRAHKFTRSSFKAVLKECLDLLECLGVPWVQASGEAEAMCAYLD 142
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
+ G +TDD D +L+GA+TVY+NF K HV YT I+
Sbjct: 143 AHGYVDGCLTDDGDAFLYGAQTVYRNFTMNAKDPHVDCYTMSSIK 187
>gi|195155221|ref|XP_002018504.1| GL16728 [Drosophila persimilis]
gi|317374892|sp|B4GIM3.1|FEN1_DROPE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194114300|gb|EDW36343.1| GL16728 [Drosophila persimilis]
Length = 386
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 17/154 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G P +HL+G+++R +LL IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLATVNGDPTSHLMGMFYRTIRLLDNGIKPVYVFDGKPPDLK 93
Query: 207 KQTISTLEKDRDQLL------------LERGKQTRLASTITEQMSREAQELLQLFGVPFI 254
++ + R++ E K R +T++ +REA+ELL L GVP++
Sbjct: 94 SGELAKRAERREEAEKALKAATDAGDDAEIEKFNRRLVRVTKEHAREAKELLSLMGVPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
AP EAEAQCA+L T+D D FG+
Sbjct: 154 DAPCEAEAQCAALVKAGKVYATATEDMDALTFGS 187
>gi|403177167|ref|XP_003335732.2| hypothetical protein PGTG_17170 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172758|gb|EFP91313.2| hypothetical protein PGTG_17170 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1403
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIWL+Q K D G + NAH++G RI KLL++ IKPVFVFDGGVP LKKQ
Sbjct: 103 LAIDSSIWLYQFQKAMRDREGKGIVNAHILGFLRRISKLLYYGIKPVFVFDGGVPTLKKQ 162
Query: 209 TISTLEKDRDQLLLERGKQTRLAST 233
TI+ +K + RG Q LA T
Sbjct: 163 TINERKKRK------RGVQENLAKT 181
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 59/92 (64%)
Query: 219 QLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
+L ++ K R A + QMS++ Q LL+LFG+PF+V+P EAEAQCA L G+IT
Sbjct: 937 RLKEQKAKDRRDADDVNLQMSQDIQNLLKLFGIPFVVSPMEAEAQCAELLKLGLVDGIIT 996
Query: 279 DDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
DDSD++LFG VYKN F++ V Y D+
Sbjct: 997 DDSDVFLFGGHRVYKNLFNQNKFVECYLMNDL 1028
>gi|50302949|ref|XP_451412.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640543|emb|CAH03000.1| KLLA0A09427p [Kluyveromyces lactis]
Length = 1011
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K R A +T +M E Q LL FG+P+I AP EAEAQCA+L GVI
Sbjct: 730 DELFEQQKKDKRDADEVTIEMIHEIQSLLSRFGIPYITAPMEAEAQCATLLQLKLVDGVI 789
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYT 306
TDDSD++LFG VYKN F +K++V Y+
Sbjct: 790 TDDSDVFLFGGTHVYKNMFQEKNYVEYYS 818
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K + G ++ NAH+IG + RICKLL++ IKPVFVFDGGVP LK TI
Sbjct: 30 DASIWIYQFLKAMRNKEGDALRNAHIIGFFRRICKLLYYGIKPVFVFDGGVPVLKLNTI- 88
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSRE 241
R++ +GK+ +T ++R+
Sbjct: 89 -----RERKERRQGKRDTANATARRLLARQ 113
>gi|45198651|ref|NP_985680.1| AFR133Cp [Ashbya gossypii ATCC 10895]
gi|44984661|gb|AAS53504.1| AFR133Cp [Ashbya gossypii ATCC 10895]
gi|374108910|gb|AEY97816.1| FAFR133Cp [Ashbya gossypii FDAG1]
Length = 970
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 63/102 (61%)
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
+I+T D+L + K R A +T +M R+ Q+LL +FG+P++ AP EAEAQCA L
Sbjct: 680 SIATTAFIEDELYEQNTKDKRDADEVTPEMIRDIQQLLSIFGIPYLTAPMEAEAQCAELL 739
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G+ITDDSD++LFG V+KN F +K++V Y I
Sbjct: 740 RLKLIDGIITDDSDVFLFGGSKVFKNMFQEKNYVEYYNTETI 781
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 6/93 (6%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K D G + AH+IG + RICKLL+F IKPVFVFDGGVP LK++TI
Sbjct: 30 DASIWIYQFLKAARDKNGNRLKGAHIIGFFRRICKLLYFGIKPVFVFDGGVPPLKRETIR 89
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQE 244
++ R+ GK+ A T + ++ + Q+
Sbjct: 90 QRKERRE------GKRESAAVTARKLLALQVQQ 116
>gi|327261246|ref|XP_003215442.1| PREDICTED: flap endonuclease GEN homolog 1-like [Anolis
carolinensis]
Length = 631
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 149 LISDVSIWL--HQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
L D+S+W+ Q+ K G V HL L+ R+ L I VFV +G P+LK
Sbjct: 27 LAVDLSLWVCEAQMVKKMM----GIVKKPHLRNLFFRLSSLTLMGIHLVFVMEGDAPKLK 82
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
T+ ++ R + G TR + + +E E+L+ GVP++ A GEAEA CA
Sbjct: 83 ANTMEKRKEIRFGPSRKPGT-TRTGRSHLKSFLKECLEMLECLGVPWVQAAGEAEAMCAY 141
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDI 310
L + IT+D D +L+GA+TVY+NF K HV Y+ I
Sbjct: 142 LNSNGYVDACITNDGDAFLYGAQTVYRNFTMNTKDPHVDCYSISAI 187
>gi|121699074|ref|XP_001267903.1| DNA excision repair protein Rad2 [Aspergillus clavatus NRRL 1]
gi|119396045|gb|EAW06477.1| DNA excision repair protein Rad2 [Aspergillus clavatus NRRL 1]
Length = 1140
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 62/97 (63%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +T+ M E Q+LL+LFG+P++ AP EAEAQCA L
Sbjct: 795 EQELQQLRSQQKKDRRDADEVTQVMITECQQLLRLFGLPYVTAPMEAEAQCAELVSLGLV 854
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G+ITDDSDI+LFG VYKN F++ +V Y D+
Sbjct: 855 DGIITDDSDIFLFGGTRVYKNMFNQSKYVECYLTSDM 891
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F IKPVFVFDGG P LK++
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLYFGIKPVFVFDGGAPVLKRE 86
Query: 209 TIS 211
TI+
Sbjct: 87 TIA 89
>gi|159124202|gb|EDP49320.1| DNA excision repair protein Rad2 [Aspergillus fumigatus A1163]
Length = 1130
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLYFGIKPVFVFDGGAPVLKRQ 86
Query: 209 TIS 211
TI+
Sbjct: 87 TIA 89
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 60/97 (61%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +T+ M E Q+LL LFG+P+I AP EAEAQCA L
Sbjct: 775 EQELRQLRSQQKKDRRDADEVTQVMITECQQLLSLFGLPYITAPMEAEAQCAELVSLGLV 834
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G+ITDDSDI+LFG VYKN F++ V Y D+
Sbjct: 835 DGIITDDSDIFLFGGTRVYKNMFNQGKFVECYLTSDM 871
>gi|70991587|ref|XP_750642.1| DNA excision repair protein Rad2 [Aspergillus fumigatus Af293]
gi|66848275|gb|EAL88604.1| DNA excision repair protein Rad2 [Aspergillus fumigatus Af293]
Length = 1130
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLYFGIKPVFVFDGGAPVLKRQ 86
Query: 209 TIS 211
TI+
Sbjct: 87 TIA 89
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 61/97 (62%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +T+ M E Q+LL LFG+P+I+AP EAEAQCA L
Sbjct: 775 EQELRQLRSQQKKDRRDADEVTQVMITECQQLLSLFGLPYIIAPMEAEAQCAELVSLGLV 834
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G+ITDDSDI+LFG VYKN F++ V Y D+
Sbjct: 835 DGIITDDSDIFLFGGTRVYKNMFNQGKFVECYLTSDM 871
>gi|449298336|gb|EMC94351.1| hypothetical protein BAUCODRAFT_73871 [Baudoinia compniacensis UAMH
10762]
Length = 1348
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%)
Query: 208 QTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASL 267
+ I+ EK+ QL ++ K R A +T M E Q+LL+LFG+P++ AP EAEAQCA L
Sbjct: 949 ENIAEYEKELKQLRNQQKKDRRDADEVTHIMVTECQQLLRLFGLPYVTAPMEAEAQCAEL 1008
Query: 268 ELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
G++TDDSD +LFG +YKN F++ V Y + D+ F
Sbjct: 1009 VRLGLVDGIVTDDSDCFLFGGTRIYKNMFNQAKFVECYLSSDLEKEF 1055
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLLF+ IKPVFVFDGG P LK+
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLFYGIKPVFVFDGGAPALKRA 86
Query: 209 TIST 212
TI+
Sbjct: 87 TITA 90
>gi|358390983|gb|EHK40388.1| hypothetical protein TRIATDRAFT_41742 [Trichoderma atroviride IMI
206040]
Length = 1172
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+Q E++ L ++ K R A +T+ M E Q LL+LFG+P+I AP EAEAQCA
Sbjct: 846 EQNREDYERELRALRSQQKKDRRDADEVTQTMITECQALLRLFGIPYITAPMEAEAQCAE 905
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
L N G++TDDSD +LFG VYKN F+ V Y D+
Sbjct: 906 LVRLNMVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYVGADL 949
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I PVFVFDGG P LK+
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLWFGILPVFVFDGGAPALKRA 86
Query: 209 TISTLEKDRD 218
TI ++ R+
Sbjct: 87 TIQKRKQRRE 96
>gi|378754698|gb|EHY64727.1| flap endonuclease 1-B [Nematocida sp. 1 ERTm2]
Length = 342
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI-------STLEKDRDQLLLERGK 226
AHL G++++ L+ I PV++FDG P+LK+ + E+D +Q E K
Sbjct: 61 TAHLYGIFYKTINLIEKGIVPVYIFDGLAPELKENILVERRARKEQAERDLEQAETESEK 120
Query: 227 QTRLASTI--TEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIW 284
T+ T+ AQ LL GVP++ AP EAE CA+L + N GV+++D D
Sbjct: 121 MKHAKRTVRATKYHVESAQALLSAMGVPYMTAPNEAEGFCAALNIANAVNGVVSEDMDSL 180
Query: 285 LFGARTVYKNFF 296
FG + + +NFF
Sbjct: 181 AFGGKVLLRNFF 192
>gi|195123149|ref|XP_002006071.1| GI18754 [Drosophila mojavensis]
gi|317374891|sp|B4KNM1.1|FEN1_DROMO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|193911139|gb|EDW10006.1| GI18754 [Drosophila mojavensis]
Length = 388
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 17/154 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G P +HL+G+++R +LL IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLATVNGDPTSHLMGMFYRTIRLLDNGIKPVYVFDGKPPDLK 93
Query: 207 KQTISTLEKDRDQ------LLLERG------KQTRLASTITEQMSREAQELLQLFGVPFI 254
++ + R++ + + G K R +T++ S EA+ELL+L GVP++
Sbjct: 94 AGELAKRAERREEAEKALKVATDAGDEAEIEKFNRRLVRVTKEHSNEAKELLKLMGVPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
AP EAEAQCA+L T+D D FG+
Sbjct: 154 DAPCEAEAQCAALVKAGKVYATATEDMDALTFGS 187
>gi|365759754|gb|EHN01528.1| Rad27p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 380
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 15/150 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q GG + N +HL+G+++R +++ IKP +VFDG P++
Sbjct: 34 DASMSLYQFLIAVRQQDGGQLANEAGETTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPEM 93
Query: 206 KKQTISTLEKDRDQLL---------LERGKQTRLASTITEQMSREAQELLQLFGVPFIVA 256
K ++ R++ LE+ KQ R ++++ + EAQ+LL L GVP+I+A
Sbjct: 94 KSHELTKRSSRREETEKKLAEATTELEKMKQERRLVKVSKEHNEEAQKLLGLMGVPYIIA 153
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLF 286
P EAEAQCA L ++D D +
Sbjct: 154 PTEAEAQCAELAKKGKVYAAASEDMDTLCY 183
>gi|448124207|ref|XP_004204862.1| Piso0_000145 [Millerozyma farinosa CBS 7064]
gi|358249495|emb|CCE72561.1| Piso0_000145 [Millerozyma farinosa CBS 7064]
Length = 1067
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++P +H++G + RICKLL++ I PVFVFDGG P LKKQ
Sbjct: 27 LAVDASIWIYQFLKAVRDAEGNALPQSHIVGFFRRICKLLYYGIMPVFVFDGGAPILKKQ 86
Query: 209 TIS 211
TI+
Sbjct: 87 TIA 89
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 56/89 (62%)
Query: 226 KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWL 285
K R + T+ M + QELL+ FG+P+I+AP EAEAQCA L G+ITDDSD +L
Sbjct: 792 KAKRDSDEPTQNMISDVQELLKRFGIPYIIAPMEAEAQCAELMRIGLVDGIITDDSDCFL 851
Query: 286 FGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
FG VYKN F++K +V Y+ DI +
Sbjct: 852 FGGDKVYKNMFNQKKYVECYSQKDIESHL 880
>gi|448121834|ref|XP_004204307.1| Piso0_000145 [Millerozyma farinosa CBS 7064]
gi|358349846|emb|CCE73125.1| Piso0_000145 [Millerozyma farinosa CBS 7064]
Length = 1063
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 56/89 (62%)
Query: 226 KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWL 285
K R + T+ M + QELL+ FG+P+I+AP EAEAQCA L G+ITDDSD +L
Sbjct: 788 KAKRDSDEPTQNMISDVQELLKRFGIPYIIAPMEAEAQCAELMRIGLVDGIITDDSDCFL 847
Query: 286 FGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
FG VYKN F++K +V Y+ DI +
Sbjct: 848 FGGDKVYKNMFNQKKYVECYSQKDIESHL 876
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++P +H++G + RICKLL++ I PVFVFDGG P LKKQ
Sbjct: 27 LAVDASIWIYQFLKAVRDGEGNALPQSHIVGFFRRICKLLYYGIMPVFVFDGGAPVLKKQ 86
Query: 209 TIS 211
TI+
Sbjct: 87 TIA 89
>gi|344228751|gb|EGV60637.1| hypothetical protein CANTEDRAFT_132346 [Candida tenuis ATCC 10573]
Length = 960
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 218 DQLLLERG-KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGV 276
+QLL ER KQ R + +T+ M + QELL+ FG+PF+ AP EAEAQC L G+
Sbjct: 676 EQLLQERLLKQKRDSEEVTQAMINDVQELLRRFGIPFLTAPMEAEAQCVELLKLGLVDGI 735
Query: 277 ITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
+TDDSD +LFG VYKN F++K V Y + D+
Sbjct: 736 VTDDSDTFLFGGDRVYKNMFNQKQFVECYLSEDV 769
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ ++H++G + RICKLL+F I+PVF+FDGG P LK+
Sbjct: 27 LAVDASIWIYQFLKAVRDSEGNTLHSSHIVGFFRRICKLLYFGIQPVFIFDGGAPALKRD 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQ 247
TI ++ RD GK+ + T ++ AQ +Q
Sbjct: 87 TIKKRKERRD------GKREDASETAHRLLAIHAQRRVQ 119
>gi|449283697|gb|EMC90302.1| Flap endonuclease GEN like protein 1, partial [Columba livia]
Length = 542
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 7/107 (6%)
Query: 192 IKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQ---TRLASTITEQMSREAQELLQL 248
IK VFV +G P+LK T+S R+++ K+ R ++ + M +E ELL+
Sbjct: 3 IKLVFVMEGEAPKLKADTMS----KRNEMRYGPSKKVGAARTGRSLFKAMLKECLELLEC 58
Query: 249 FGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
GVP++ A GEAEA CA L H G IT+D D++L+GA TVY+NF
Sbjct: 59 LGVPWVQAAGEAEAMCAYLNAKGHVDGCITNDGDVFLYGAHTVYRNF 105
>gi|429853644|gb|ELA28704.1| DNA excision repair protein rad2 [Colletotrichum gloeosporioides
Nara gc5]
Length = 1240
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 45/62 (72%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWFGIKPVFVFDGGAPVLKRQ 86
Query: 209 TI 210
TI
Sbjct: 87 TI 88
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 57/97 (58%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ L ++ K R A +T+ M E Q LL+LFG+P+I AP EAEAQCA L
Sbjct: 883 ERELKALRTQQKKDRRDADEVTQVMVTECQALLRLFGIPYITAPMEAEAQCAELVHLGLV 942
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G++TDDSD +LFG VYKN F+ V Y D+
Sbjct: 943 DGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYLGSDL 979
>gi|169596320|ref|XP_001791584.1| hypothetical protein SNOG_00917 [Phaeosphaeria nodorum SN15]
gi|160701280|gb|EAT92412.2| hypothetical protein SNOG_00917 [Phaeosphaeria nodorum SN15]
Length = 1279
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + R+CKLLF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRVCKLLFIGIKPVFVFDGGAPVLKRQ 86
Query: 209 TISTLEKDRD 218
TI+ + R+
Sbjct: 87 TINNRKSRRE 96
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 55/95 (57%)
Query: 220 LLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITD 279
L ++ K R A +T+ M E Q LL LFG+P+I AP EAEAQCA L G++TD
Sbjct: 907 LRAQQKKDRRDADEVTQSMITECQHLLTLFGLPYITAPMEAEAQCAELVHLGLVDGIVTD 966
Query: 280 DSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
DSD +LFG VYKN F+ V Y A D+ F
Sbjct: 967 DSDTFLFGGTRVYKNMFNAAKFVECYLANDLVSEF 1001
>gi|388583607|gb|EIM23908.1| PIN domain-like protein [Wallemia sebi CBS 633.66]
Length = 1046
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 235 TEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKN 294
T QM+ E Q+LL+ FG+P+I AP EAEAQCA L N VITDDSD++LFGA VYKN
Sbjct: 718 TMQMTGEIQKLLRAFGIPYITAPMEAEAQCAKLAQMNLVDAVITDDSDVFLFGAPIVYKN 777
Query: 295 FFDKKSHVLRYTAPDI 310
F+ + V Y + DI
Sbjct: 778 MFNDRQFVECYVSSDI 793
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIWL+ + D G ++ NAH++G RI KLLF+ +KPVFVFDGG P+LKK TIS
Sbjct: 30 DSSIWLYHFLRAIKDKQGHTLTNAHILGFLRRILKLLFYGLKPVFVFDGGAPRLKKTTIS 89
Query: 212 TLEKDR 217
+ R
Sbjct: 90 ERKNRR 95
>gi|396470540|ref|XP_003838668.1| similar to DNA excision repair protein Rad2 [Leptosphaeria maculans
JN3]
gi|312215236|emb|CBX95189.1| similar to DNA excision repair protein Rad2 [Leptosphaeria maculans
JN3]
Length = 1312
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 44/62 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLLF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLFIGIKPVFVFDGGAPALKRQ 86
Query: 209 TI 210
TI
Sbjct: 87 TI 88
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 59/102 (57%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
+K+ QL ++ K R A +T+ M E Q LL LFG+P+I AP EAEAQCA L
Sbjct: 947 FDKELKQLRAQQKKDRRDADEVTQTMITECQHLLTLFGLPYITAPMEAEAQCAELVSLGL 1006
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
G++TDDSD +LFG VYKN F+ V Y A D+ F
Sbjct: 1007 VDGIVTDDSDTFLFGGTRVYKNMFNAAKFVECYLASDLASEF 1048
>gi|322712027|gb|EFZ03600.1| XPG domain containing protein [Metarhizium anisopliae ARSEF 23]
Length = 1191
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 60/104 (57%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+Q EK+ QL ++ K R A +T+ M E Q LL+LFG+P+I AP EAEAQCA
Sbjct: 846 QQNREDYEKELRQLRNQQKKDRRDADEVTQVMVTECQALLRLFGIPYITAPMEAEAQCAE 905
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
L G++TDDSD +LFG VYKN F+ V Y D+
Sbjct: 906 LVKLGIVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYIGKDL 949
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I+PVFVFDGG P LK+
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWFGIQPVFVFDGGAPALKRA 86
Query: 209 TI 210
TI
Sbjct: 87 TI 88
>gi|332376861|gb|AEE63570.1| unknown [Dendroctonus ponderosae]
Length = 380
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 17/161 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G P +HL+G ++R +LL IKPV+VFDG P++K
Sbjct: 34 DASMSLYQFLIAVRSEGAQLTTADGEPTSHLVGTFYRTIRLLEHGIKPVYVFDGKPPEMK 93
Query: 207 KQTISTLEKDRDQL------LLERGKQT------RLASTITEQMSREAQELLQLFGVPFI 254
++ + R + +E G Q R +T + EA+ELL+L GVP+I
Sbjct: 94 GGELNKRMEKRAEAQKALDKAMEAGDQAEVDKFNRRLVKVTRHHADEAKELLRLMGVPYI 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
AP EAEAQCA++ T+D D FG+ V ++
Sbjct: 154 EAPCEAEAQCAAMVKAGKIYATATEDMDALTFGSDIVLRHL 194
>gi|384249049|gb|EIE22531.1| hypothetical protein COCSUDRAFT_6698, partial [Coccomyxa
subellipsoidea C-169]
Length = 262
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 53/73 (72%)
Query: 238 MSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFD 297
M + QELLQLFG+P+I+AP EAEAQCA L+ GV+TDD+D++LFGA+ VY++ F+
Sbjct: 1 MYGDCQELLQLFGLPYIIAPSEAEAQCAWLDANGLVDGVVTDDNDVFLFGAKHVYRHIFE 60
Query: 298 KKSHVLRYTAPDI 310
+ +V Y D+
Sbjct: 61 NRKYVEEYRTEDV 73
>gi|238484915|ref|XP_002373696.1| DNA excision repair protein Rad2 [Aspergillus flavus NRRL3357]
gi|220701746|gb|EED58084.1| DNA excision repair protein Rad2 [Aspergillus flavus NRRL3357]
Length = 1135
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLYFGIKPVFVFDGGAPILKRQ 86
Query: 209 TIS 211
TI+
Sbjct: 87 TIA 89
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 60/97 (61%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL LFG+P+I AP EAEAQCA L
Sbjct: 782 EQELKQLRSQQKKDRRDADEVSQIMISECQQLLTLFGLPYITAPMEAEAQCAELVALGLV 841
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G+ITDDSDI+LFG VYKN F++ V Y D+
Sbjct: 842 DGIITDDSDIFLFGGTRVYKNMFNQGKFVECYLTSDL 878
>gi|322694710|gb|EFY86532.1| DNA excision repair protein Rad2 [Metarhizium acridum CQMa 102]
Length = 1168
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 61/104 (58%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+Q EK+ QL ++ K R A +T+ M E Q LL+LFG+P+I AP EAEAQCA
Sbjct: 845 QQNRQDYEKELRQLRNQQKKDRRDADEVTQVMITECQALLRLFGIPYITAPMEAEAQCAE 904
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
L G++TDDSD +LFG VYKN F+ V Y + D+
Sbjct: 905 LVRLGIVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYISKDL 948
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I+PVFVFDGG P LK+
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWFGIQPVFVFDGGAPALKRA 86
Query: 209 TI 210
TI
Sbjct: 87 TI 88
>gi|317140876|ref|XP_001818459.2| single-stranded DNA endonuclease [Aspergillus oryzae RIB40]
Length = 1135
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLYFGIKPVFVFDGGAPILKRQ 86
Query: 209 TIS 211
TI+
Sbjct: 87 TIA 89
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 60/97 (61%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL LFG+P+I AP EAEAQCA L
Sbjct: 782 EQELKQLRSQQKKDRRDADEVSQIMISECQQLLTLFGLPYITAPMEAEAQCAELVALGLV 841
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G+ITDDSDI+LFG VYKN F++ V Y D+
Sbjct: 842 DGIITDDSDIFLFGGTRVYKNMFNQGKFVECYLTSDL 878
>gi|346973852|gb|EGY17304.1| DNA-repair protein rad13 [Verticillium dahliae VdLs.17]
Length = 1187
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 45/62 (72%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I+PVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWFGIRPVFVFDGGAPALKRQ 86
Query: 209 TI 210
TI
Sbjct: 87 TI 88
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 58/97 (59%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ L ++ K R A +T+ M E Q LL+LFG+P+I AP EAEAQCA L
Sbjct: 863 ERELKALRTQQKKDRRDADEVTQVMVGECQALLRLFGIPYITAPMEAEAQCAELVRLGLV 922
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G++TDDSD +LFG VYKN F+ V Y + D+
Sbjct: 923 DGIVTDDSDTFLFGGTRVYKNMFNSNKLVECYLSSDL 959
>gi|401841744|gb|EJT44085.1| RAD27-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 380
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 15/150 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q GG + N +HL+G+++R +++ IKP +VFDG P++
Sbjct: 34 DASMSLYQFLIAVRQQDGGQLTNEAGETTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPEM 93
Query: 206 KKQTISTLEKDRDQLL---------LERGKQTRLASTITEQMSREAQELLQLFGVPFIVA 256
K ++ R++ LE+ KQ R ++++ + EAQ+LL L GVP+I+A
Sbjct: 94 KSHELTKRSSRREETEKKLAEATTELEKMKQERRLVKVSKEHNEEAQKLLGLMGVPYIIA 153
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLF 286
P EAEAQCA L ++D D +
Sbjct: 154 PTEAEAQCAELAKKGKVYAAASEDMDTLCY 183
>gi|83766314|dbj|BAE56457.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1066
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLYFGIKPVFVFDGGAPILKRQ 86
Query: 209 TIS 211
TI+
Sbjct: 87 TIA 89
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 60/97 (61%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL LFG+P+I AP EAEAQCA L
Sbjct: 782 EQELKQLRSQQKKDRRDADEVSQIMISECQQLLTLFGLPYITAPMEAEAQCAELVALGLV 841
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G+ITDDSDI+LFG VYKN F++ V Y D+
Sbjct: 842 DGIITDDSDIFLFGGTRVYKNMFNQGKFVECYLTSDL 878
>gi|340923811|gb|EGS18714.1| putative DNA repair protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1238
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 204 QLKKQTISTLEKDRDQ----LLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGE 259
QL +++ ++D +Q L ++ + R A +T+ M E Q LLQLFG+P+I AP E
Sbjct: 842 QLNNKSVRENQQDYEQELRSLRSQQKRDRRDADEVTQVMISECQTLLQLFGIPYITAPME 901
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
AEAQCA L G++TDDSD +LFG VYKN F+ +V Y A +I
Sbjct: 902 AEAQCAELVRLGLVDGIVTDDSDTFLFGGTRVYKNVFNSNKYVECYLASEI 952
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+HL+G + RICKLL++ +KPVFVFDGG P LK+
Sbjct: 27 LAIDASIWIYQFLKAVRDKEGNALRNSHLVGFFRRICKLLWYGVKPVFVFDGGAPALKRA 86
Query: 209 TI 210
T+
Sbjct: 87 TL 88
>gi|302415937|ref|XP_003005800.1| DNA-repair protein rad13 [Verticillium albo-atrum VaMs.102]
gi|261355216|gb|EEY17644.1| DNA-repair protein rad13 [Verticillium albo-atrum VaMs.102]
Length = 1209
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 45/62 (72%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I+PVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWFGIRPVFVFDGGAPALKRQ 86
Query: 209 TI 210
TI
Sbjct: 87 TI 88
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 58/97 (59%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ L ++ K R A +T+ M E Q LL+LFG+P+I AP EAEAQCA L
Sbjct: 849 ERELKALRTQQKKDRRDADEVTQVMVGECQALLRLFGIPYITAPMEAEAQCAELVRLGLV 908
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G++TDDSD +LFG VYKN F+ V Y + D+
Sbjct: 909 DGIVTDDSDTFLFGGTRVYKNMFNSNKLVECYLSSDL 945
>gi|118596596|dbj|BAF37957.1| flap endonuclease-1 [Thermoplasma sp. S01]
Length = 336
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 80/133 (60%), Gaps = 14/133 (10%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS--TLEKDRDQLLL----ERGKQ- 227
+HL G+++R LL KI+PV+VFDG LK +TIS L K++ ++ L ERG++
Sbjct: 56 SHLYGIFYRTINLLENKIRPVYVFDGKPSPLKNRTISERQLMKEKAKVELEEAIERGEED 115
Query: 228 -----TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
+R+ + IT Q+ + ++LL G+P++ AP E EAQ + + N GVI+ D D
Sbjct: 116 LRQYYSRI-NYITPQIVNDTKKLLDYMGIPYVDAPSEGEAQASYMTRKN-VDGVISQDYD 173
Query: 283 IWLFGARTVYKNF 295
LFGAR V +NF
Sbjct: 174 CLLFGARKVLRNF 186
>gi|391869945|gb|EIT79134.1| 5'-3' exonuclease [Aspergillus oryzae 3.042]
Length = 1066
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLYFGIKPVFVFDGGAPILKRQ 86
Query: 209 TIS 211
TI+
Sbjct: 87 TIA 89
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 60/97 (61%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL LFG+P+I AP EAEAQCA L
Sbjct: 782 EQELKQLRSQQKKDRRDADEVSQIMISECQQLLTLFGLPYITAPMEAEAQCAELVALGLV 841
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G+ITDDSDI+LFG VYKN F++ V Y D+
Sbjct: 842 DGIITDDSDIFLFGGTRVYKNMFNQGKFVECYLTSDL 878
>gi|405953608|gb|EKC21238.1| Flap endonuclease 1-A [Crassostrea gigas]
Length = 376
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 21/180 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ ++Q G++ + +HL+G+++R +++ IKPV+VFDG P +K
Sbjct: 34 DASMCIYQFLIAVRQDGSNLMNEDGETTSHLMGMFYRTIRMVENGIKPVYVFDGKPPDMK 93
Query: 207 KQTISTLEKDRD--QLLLERGKQT----------RLASTITEQMSREAQELLQLFGVPFI 254
++ ++ R+ Q LE+ ++ R +++Q + E +ELL+ G+PFI
Sbjct: 94 SGELAKRKERREEAQKQLEKAEEAGDEENIEKFNRRLVKVSKQHNEECKELLKYMGIPFI 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
APGEAEAQCA+L T+D D FG + +N ++ L P YY+
Sbjct: 154 NAPGEAEAQCAALVKAGKVYATGTEDMDALTFGTTVLLRNLTVAEARKL----PIKEYYY 209
>gi|350420439|ref|XP_003492509.1| PREDICTED: flap endonuclease GEN-like [Bombus impatiens]
Length = 724
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S W+ T A P +L LY R LL I PVFV +G P LK +TI+
Sbjct: 30 DMSCWIVDSQTVTDHSAQ---PKMYLRNLYFRTAFLLMQGISPVFVLEGKAPTLKHKTIA 86
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
D E+ ++ T ++ E +E+LQL G+ + GEAEA CA L
Sbjct: 87 K-RNDVRSGFREKKTASKGGRTQFNRILNECKEMLQLMGLACVQGHGEAEAMCAYLNEDG 145
Query: 272 HTQGVITDDSDIWLFGARTVYKNF 295
G I+ DSD +L+GA+ VY+NF
Sbjct: 146 LVDGCISQDSDCFLYGAKVVYRNF 169
>gi|91085979|ref|XP_971921.1| PREDICTED: similar to flap endonuclease-1 [Tribolium castaneum]
gi|270009935|gb|EFA06383.1| hypothetical protein TcasGA2_TC009261 [Tribolium castaneum]
Length = 381
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 17/161 (10%)
Query: 152 DVSIWLHQLTKGTHDLAG--GSV---PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q + +G SV +HL+G ++R +L+ IKPV+VFDG P+LK
Sbjct: 34 DASMCLYQFLIAVRNESGQLTSVDGETTSHLLGTFYRTIRLIENGIKPVYVFDGKPPELK 93
Query: 207 KQTISTLEKDRDQLLLERGKQTRLAST------------ITEQMSREAQELLQLFGVPFI 254
+S ++ RD+ K T L +T + EA++LL L GVP+I
Sbjct: 94 SAELSKRQERRDEAQKALDKATELGDATEVDKFNRRLVKVTRHHADEAKQLLTLMGVPYI 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
AP EAEAQCA++ G T+D D FG+ + ++
Sbjct: 154 EAPCEAEAQCAAMVKGGLVYATATEDMDALTFGSNVLLRHL 194
>gi|358060342|dbj|GAA93747.1| hypothetical protein E5Q_00393 [Mixia osmundae IAM 14324]
Length = 1209
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 70/111 (63%), Gaps = 4/111 (3%)
Query: 204 QLKKQTISTLEKDRDQLLLERGKQT----RLASTITEQMSREAQELLQLFGVPFIVAPGE 259
QLK + + + ++ + + G+Q R A IT+QM++E + +L+LFG+P++ AP E
Sbjct: 781 QLKNRNLDEMRQEVEAEIKVLGQQQKTDRRNADEITQQMAKEIRVMLRLFGIPYVDAPME 840
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
AEAQCA L + G+ITDDSD++LFG V+KN F++ +V + DI
Sbjct: 841 AEAQCAQLWMAGLVDGIITDDSDVFLFGGGRVFKNMFNQNKYVECFLLSDI 891
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIWLHQ D G ++ NAH++G RICKLL++ IKPVFVFDGG P +K+ +S
Sbjct: 30 DSSIWLHQFQLAMRDKEGRALDNAHILGFLRRICKLLYYGIKPVFVFDGGAPVIKRIAVS 89
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMS 239
E+ R + RG LA T + +S
Sbjct: 90 --ERKRRK----RGGADSLAKTAEKLLS 111
>gi|422293199|gb|EKU20499.1| DNA excision repair protein ERCC-5, partial [Nannochloropsis
gaditana CCMP526]
Length = 120
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 51/69 (73%)
Query: 226 KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWL 285
K+ R A T++++M + LLQLFGVP++VAP EAEAQCA LE GV++DDSD +L
Sbjct: 52 KELRDAETVSQEMREDIMHLLQLFGVPYLVAPMEAEAQCAVLETLGLVDGVVSDDSDSFL 111
Query: 286 FGARTVYKN 294
FGAR VYKN
Sbjct: 112 FGARAVYKN 120
>gi|194882401|ref|XP_001975300.1| GG22240 [Drosophila erecta]
gi|317374889|sp|B3NP61.1|FEN1_DROER RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190658487|gb|EDV55700.1| GG22240 [Drosophila erecta]
Length = 387
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G P +HL+G+++R +LL IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLATVNGDPTSHLMGMFYRTIRLLDNGIKPVYVFDGKPPDLK 93
Query: 207 KQTISTLEKDRDQL------LLERG------KQTRLASTITEQMSREAQELLQLFGVPFI 254
++ + R++ + G K R +T++ ++EA+ELL L GVP++
Sbjct: 94 SGELAKRAERREEAEKALKAATDAGDDAGIEKFNRRLVRVTKEHAKEAKELLTLMGVPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
AP EAEAQCA+L T+D D FG+
Sbjct: 154 DAPCEAEAQCAALVKAGKVYATATEDMDALTFGS 187
>gi|410076602|ref|XP_003955883.1| hypothetical protein KAFR_0B04510 [Kazachstania africana CBS 2517]
gi|372462466|emb|CCF56748.1| hypothetical protein KAFR_0B04510 [Kazachstania africana CBS 2517]
Length = 988
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 54/89 (60%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L ++ K R + +T M + QELL FG+PF+ AP EAEAQCA L G+I
Sbjct: 707 DELFEQQTKDKRDSDEVTMDMITDVQELLSRFGIPFVTAPMEAEAQCAELIALGLVDGII 766
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYT 306
TDDSD++LFG VYKN F K +V Y
Sbjct: 767 TDDSDVFLFGGTKVYKNLFQDKKYVEFYN 795
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
D SIW++Q K D G ++ N+H++G + RICKLL+F IKPVFVFDGGVP LK+ TI
Sbjct: 30 DASIWIYQFLKAIRDPEGNALKNSHILGFFRRICKLLYFGIKPVFVFDGGVPLLKRNTI 88
>gi|118596628|dbj|BAF37974.1| flap endonuclease-1 [Thermoplasma sp. P61]
Length = 328
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 80/133 (60%), Gaps = 14/133 (10%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS--TLEKDRDQLLL----ERGKQ- 227
+HL G+++R LL KI+PV+VFDG LK +TIS L K++ ++ L ERG++
Sbjct: 56 SHLYGIFYRTINLLENKIRPVYVFDGKPSPLKNRTISERQLMKEKAKVELEEAIERGEED 115
Query: 228 -----TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
+R+ + IT Q+ + ++LL G+P+I AP E EAQ + + N GVI+ D D
Sbjct: 116 LRQYYSRI-NYITPQIVDDTKKLLDYMGIPYIDAPSEGEAQASYMTKKN-VDGVISQDYD 173
Query: 283 IWLFGARTVYKNF 295
LFGAR + +NF
Sbjct: 174 CLLFGARKILRNF 186
>gi|432330136|ref|YP_007248279.1| flap structure-specific endonuclease [Methanoregula formicicum
SMSP]
gi|432136845|gb|AGB01772.1| flap structure-specific endonuclease [Methanoregula formicicum
SMSP]
Length = 333
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 71/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------LLERG-- 225
+HL G+ RI + IKPVFVFDG QLK+ TI K RD +ERG
Sbjct: 56 TSHLSGILFRISNFMAKGIKPVFVFDGKPTQLKQATIEERRKLRDTAGEKWREAVERGDE 115
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
KQ R ++ + + + R ++ELL L G+P + APGE EAQ A + VI+ D
Sbjct: 116 AEAYKQARSSTRVDDTIIRTSRELLGLMGIPVVQAPGEGEAQAAFMVARGDCLYVISQDY 175
Query: 282 DIWLFGARTVYKNF 295
D LFGA T+ +N
Sbjct: 176 DTLLFGAPTLVRNL 189
>gi|260796605|ref|XP_002593295.1| hypothetical protein BRAFLDRAFT_123641 [Branchiostoma floridae]
gi|229278519|gb|EEN49306.1| hypothetical protein BRAFLDRAFT_123641 [Branchiostoma floridae]
Length = 790
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 13/171 (7%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+S+W+ + + G + G +V HL L+ R+ L + +FV DG P+LK Q
Sbjct: 27 LAVDLSMWVCEAS-GVKAMTG-AVTRPHLRNLFFRVSHLTKMGVGLIFVVDGEPPELKFQ 84
Query: 209 TISTLEKDRDQLLLER-------GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAE 261
T+ +++++D+ + GK ++ + + + +E LL G+P + + GEAE
Sbjct: 85 TM--MKRNQDRFWGSKTGQKKGLGKPKKMKRSHFKAILKECILLLDGLGIPHVQSKGEAE 142
Query: 262 AQCASLELGNHTQGVITDDSDIWLFGARTVYKNF-FDKKS-HVLRYTAPDI 310
A CA L + G +TDD D +L+GARTVY+N DKK HV Y DI
Sbjct: 143 AFCALLNRESLVDGCLTDDGDAFLYGARTVYRNLTLDKKDPHVDCYQMSDI 193
>gi|296412158|ref|XP_002835793.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629586|emb|CAZ79950.1| unnamed protein product [Tuber melanosporum]
Length = 200
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ ++H++G + RICKLLFF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGHALQSSHVVGFFRRICKLLFFGIKPVFVFDGGAPPLKRQ 86
Query: 209 TISTLEKDRD 218
TI+ + R+
Sbjct: 87 TIAGRKARRE 96
>gi|392566068|gb|EIW59244.1| PIN domain-like protein [Trametes versicolor FP-101664 SS1]
Length = 406
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLL--ERGKQT--- 228
+HL+G ++R +++ IKP +VFDG P+LK +S + R++ E K+T
Sbjct: 62 TSHLMGFFYRTIRMVENGIKPAYVFDGKPPELKSGVLSKRFEKREEAKEDNEEAKETGTA 121
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E + LL L G+PF+VAP EAEAQCA L G ++D
Sbjct: 122 EDMDRFSRRTVKVTREHNEECRRLLGLMGIPFVVAPSEAEAQCAELARGGKVYAAGSEDM 181
Query: 282 DIWLFGARTVYKNF 295
D FGA +Y++
Sbjct: 182 DTLTFGAPILYRHL 195
>gi|387595247|gb|EIJ92872.1| flap endonuclease 1-B [Nematocida parisii ERTm1]
Length = 342
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS-------TLEKDRDQLLLERGK 226
AH+ G++++ LL I PV++FDG P+LK+ T++ EKD + + E K
Sbjct: 61 TAHIYGIFYKTINLLEKGIIPVYIFDGQPPELKENTLTERRIRKEQAEKDLVEAVTEEEK 120
Query: 227 QTRLASTI--TEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIW 284
T+ T+ AQ LL++ G+P++ AP EAE CA+L + GV+++D D
Sbjct: 121 VKHAKRTVRATKYHVESAQHLLKVMGIPYMTAPNEAEGFCAALNICGAVNGVVSEDMDSL 180
Query: 285 LFGARTVYKNFF 296
FG + + +NFF
Sbjct: 181 AFGGKILLRNFF 192
>gi|387592620|gb|EIJ87644.1| flap endonuclease 1-B [Nematocida parisii ERTm3]
Length = 371
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS-------TLEKDRDQLLLERGK 226
AH+ G++++ LL I PV++FDG P+LK+ T++ EKD + + E K
Sbjct: 61 TAHIYGIFYKTINLLEKGIIPVYIFDGQPPELKENTLTERRIRKEQAEKDLVEAVTEEEK 120
Query: 227 QTRLASTI--TEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIW 284
T+ T+ AQ LL++ G+P++ AP EAE CA+L + GV+++D D
Sbjct: 121 VKHAKRTVRATKYHVESAQHLLKVMGIPYMTAPNEAEGFCAALNICGAVNGVVSEDMDSL 180
Query: 285 LFGARTVYKNFF 296
FG + + +NFF
Sbjct: 181 AFGGKILLRNFF 192
>gi|424811751|ref|ZP_18236997.1| flap structure-specific endonuclease [Candidatus Nanosalinarum sp.
J07AB56]
gi|339757159|gb|EGQ40741.1| flap structure-specific endonuclease [Candidatus Nanosalinarum sp.
J07AB56]
Length = 340
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 73/142 (51%), Gaps = 12/142 (8%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------LLERG--- 225
+HL GL++R KLL I+PV+VFDG +P LK + + R++ L E G
Sbjct: 56 SHLSGLFYRTTKLLDSNIRPVYVFDGEMPDLKATEAAQRREKREEAQKEWEKLKEEGDVD 115
Query: 226 ---KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
+ +S +T M E++ELL GVP++ AP E EAQ A + + GV + D D
Sbjct: 116 EAFSKAMQSSRVTGDMIDESRELLDAMGVPYVDAPSEGEAQAARMAANGNVYGVGSQDWD 175
Query: 283 IWLFGARTVYKNFFDKKSHVLR 304
LFGA + KN +K R
Sbjct: 176 SLLFGAERMVKNLTSRKKRSNR 197
>gi|126653087|ref|XP_001388383.1| flap endonuclease 1 [Cryptosporidium parvum Iowa II]
gi|317374887|sp|A3FPN7.1|FEN1_CRYPI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|126117476|gb|EAZ51576.1| flap endonuclease 1 [Cryptosporidium parvum Iowa II]
Length = 490
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 20/177 (11%)
Query: 152 DVSIWLHQLTKGTHDLAG-GSVPNA------HLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S+W++Q + + G++ N+ H+ G+ R +LL IKPVFVFDG P+
Sbjct: 34 DASMWIYQFLAAIREGSQWGNLTNSSGESTSHINGMLSRTTRLLEAGIKPVFVFDGAPPE 93
Query: 205 LKKQTISTLEKDRDQLL--LERG----------KQTRLASTITEQMSREAQELLQLFGVP 252
+KK ++ ++ R++ L LE+ KQ+ +T++ + ++LL G+P
Sbjct: 94 MKKDELTKRDERREKALAELEKAQEIGDEELIKKQSVRTIHVTKKQVEDVKKLLGFLGMP 153
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF-FDKKSHVLRYTAP 308
I AP EAEAQCA L GV+T+D+D FG K F + S+ + +P
Sbjct: 154 CIDAPSEAEAQCAELCKDGLVYGVVTEDADSLTFGTPIQIKQLNFSESSNKITDKSP 210
>gi|350632743|gb|EHA21110.1| hypothetical protein ASPNIDRAFT_45646 [Aspergillus niger ATCC 1015]
Length = 1130
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I+PVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLYFGIQPVFVFDGGAPVLKRQ 86
Query: 209 TIST 212
TI+
Sbjct: 87 TIAN 90
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 61/97 (62%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL+LFG+P+I AP EAEAQCA L
Sbjct: 775 EQELRQLRSQQKKDRRDADEVSQVMITECQQLLRLFGLPYITAPMEAEAQCAELVSLGLV 834
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G+ITDDSD++LFG VYKN F++ V Y D+
Sbjct: 835 DGIITDDSDVFLFGGTRVYKNMFNQSKFVECYLTTDL 871
>gi|195584050|ref|XP_002081828.1| GD25512 [Drosophila simulans]
gi|317374895|sp|B4QIG6.1|FEN1_DROSI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194193837|gb|EDX07413.1| GD25512 [Drosophila simulans]
Length = 385
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G P +HL+G+++R +LL IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLATVNGDPTSHLMGMFYRTIRLLDNGIKPVYVFDGKPPDLK 93
Query: 207 KQTISTLEKDRDQL------LLERG------KQTRLASTITEQMSREAQELLQLFGVPFI 254
++ + R++ + G K R +T++ ++EA+ELL L GVP++
Sbjct: 94 SGELAKRAERREEAEKALKAATDAGDDAGIEKFNRRLVRVTKEHAKEAKELLTLMGVPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
AP EAEAQCA+L T+D D FG+
Sbjct: 154 DAPCEAEAQCAALVKAGKVYATATEDMDALTFGS 187
>gi|317028500|ref|XP_001390185.2| single-stranded DNA endonuclease [Aspergillus niger CBS 513.88]
Length = 1100
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I+PVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLYFGIQPVFVFDGGAPVLKRQ 86
Query: 209 TIST 212
TI+
Sbjct: 87 TIAN 90
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 61/97 (62%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL+LFG+P+I AP EAEAQCA L
Sbjct: 745 EQELRQLRSQQKKDRRDADEVSQVMITECQQLLRLFGLPYITAPMEAEAQCAELVSLGLV 804
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G+ITDDSD++LFG VYKN F++ V Y D+
Sbjct: 805 DGIITDDSDVFLFGGTRVYKNMFNQSKFVECYLTTDL 841
>gi|340517177|gb|EGR47422.1| predicted protein [Trichoderma reesei QM6a]
Length = 1166
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+Q E++ L ++ K R A +T+ M E Q LL+LFG+P+I AP EAEAQCA
Sbjct: 836 QQNREDYERELRALRNQQKKDRRDADEVTQTMIAECQALLRLFGIPYITAPMEAEAQCAE 895
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
L G++TDDSD +LFG VYKN F+ V Y A D+
Sbjct: 896 LVRLGMVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYIASDL 939
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 48/70 (68%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I+PVFVFDGG P LK+
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLWFGIQPVFVFDGGAPALKRA 86
Query: 209 TISTLEKDRD 218
TI ++ R+
Sbjct: 87 TIQKRKQRRE 96
>gi|17647423|ref|NP_523765.1| flap endonuclease 1 [Drosophila melanogaster]
gi|122102839|sp|Q7K7A9.1|FEN1_DROME RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|3929699|emb|CAA21320.1| EG:EG0003.3 [Drosophila melanogaster]
gi|7302871|gb|AAF57944.1| flap endonuclease 1 [Drosophila melanogaster]
gi|261260009|gb|ACX54939.1| MIP14376p [Drosophila melanogaster]
Length = 385
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G P +HL+G+++R +LL IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLATVNGDPTSHLMGMFYRTIRLLDNGIKPVYVFDGKPPDLK 93
Query: 207 KQTISTLEKDRDQL------LLERG------KQTRLASTITEQMSREAQELLQLFGVPFI 254
++ + R++ + G K R +T++ ++EA+ELL L GVP++
Sbjct: 94 SGELAKRAERREEAEKALKAATDAGDDAGIEKFNRRLVRVTKEHAKEAKELLTLMGVPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
AP EAEAQCA+L T+D D FG+
Sbjct: 154 DAPCEAEAQCAALVKAGKVYATATEDMDALTFGS 187
>gi|195335051|ref|XP_002034189.1| GM20026 [Drosophila sechellia]
gi|317374894|sp|B4HTA1.1|FEN1_DROSE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194126159|gb|EDW48202.1| GM20026 [Drosophila sechellia]
Length = 385
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G P +HL+G+++R +LL IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLATVNGDPTSHLMGMFYRTIRLLDNGIKPVYVFDGKPPDLK 93
Query: 207 KQTISTLEKDRDQL------LLERG------KQTRLASTITEQMSREAQELLQLFGVPFI 254
++ + R++ + G K R +T++ ++EA+ELL L GVP++
Sbjct: 94 SGELAKRAERREEAEKALKAATDAGDDAGIEKFNRRLVRVTKEHAKEAKELLTLMGVPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
AP EAEAQCA+L T+D D FG+
Sbjct: 154 DAPCEAEAQCAALVKAGKVYATATEDMDALTFGS 187
>gi|146171182|ref|XP_001470841.1| flap endonuclease-1 [Tetrahymena thermophila]
gi|317376196|sp|A4VDN2.1|FEN1_TETTS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|146145019|gb|EDK31639.1| flap endonuclease-1 [Tetrahymena thermophila SB210]
Length = 384
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 85/175 (48%), Gaps = 21/175 (12%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPN---------AHLIGLYHRICKLLFFKIKPVFVFD 199
+ D S+ ++Q T + + N HL+GL +R L+ +KPV+VFD
Sbjct: 31 IACDASMAMYQFLATTSSASDFQIQNLTDKDGNKTGHLVGLLNRTVMLIENGLKPVWVFD 90
Query: 200 GGVPQLKKQTISTLEKDRDQ------LLLERG------KQTRLASTITEQMSREAQELLQ 247
G PQ K ++ +K +D+ +E G KQ + IT++M +A +LLQ
Sbjct: 91 GKPPQFKSGELARRQKAKDEAAEKQKTAIETGDMQEALKQEQRNLHITKEMKADAIKLLQ 150
Query: 248 LFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHV 302
L GVP I+AP EAEAQCA+L +T+D D F + +N KK +
Sbjct: 151 LVGVPVILAPCEAEAQCAALAKAKKVFATVTEDMDALTFATPFLLRNLNSKKEPI 205
>gi|134057865|emb|CAK44589.1| unnamed protein product [Aspergillus niger]
Length = 187
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I+PVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLYFGIQPVFVFDGGAPVLKRQ 86
Query: 209 TIS 211
TI+
Sbjct: 87 TIA 89
>gi|168010775|ref|XP_001758079.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690535|gb|EDQ76901.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1718
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW+ Q K D G + NAHL+G + RICKLLF ++KPVFVFDGG P LK++
Sbjct: 27 LAIDASIWIIQFMKAMRDDRGDMIRNAHLLGFFRRICKLLFLRVKPVFVFDGGTPALKRR 86
Query: 209 TISTLEKDRDQ 219
T+ + R+Q
Sbjct: 87 TVIARRRQREQ 97
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 58/85 (68%)
Query: 226 KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWL 285
K R A ++T +M E QELLQ+FG+P+++AP EAEAQCA L+ GV+TDD D++L
Sbjct: 1034 KNERNADSVTSEMFAECQELLQMFGLPYVIAPMEAEAQCAFLDAEKLVDGVVTDDVDVFL 1093
Query: 286 FGARTVYKNFFDKKSHVLRYTAPDI 310
FG R VYKN FD + +V Y D+
Sbjct: 1094 FGGRNVYKNIFDDRKYVETYYMKDV 1118
>gi|358375820|dbj|GAA92396.1| DNA excision repair protein Rad2 [Aspergillus kawachii IFO 4308]
Length = 1135
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I+PVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLYFGIQPVFVFDGGAPVLKRQ 86
Query: 209 TIST 212
TI+
Sbjct: 87 TIAN 90
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 61/97 (62%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL+LFG+P++ AP EAEAQCA L
Sbjct: 777 EQELRQLRSQQKKDRRDADEVSQVMITECQQLLRLFGLPYVTAPMEAEAQCAELVSLGLV 836
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G+ITDDSD++LFG VYKN F++ V Y D+
Sbjct: 837 DGIITDDSDVFLFGGTRVYKNMFNQSKFVECYLTTDL 873
>gi|154321748|ref|XP_001560189.1| hypothetical protein BC1G_01021 [Botryotinia fuckeliana B05.10]
Length = 904
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 44/62 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLLF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLFHGIKPVFVFDGGAPILKRQ 86
Query: 209 TI 210
T+
Sbjct: 87 TV 88
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 206 KKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCA 265
+K+ + E+D L ++ K R A ++ M E Q LL+LFG+P+I AP EAEAQCA
Sbjct: 840 EKENHDSYEQDLKALRNQQKKDRRDADEVSHIMITECQALLRLFGIPYITAPMEAEAQCA 899
Query: 266 SL 267
L
Sbjct: 900 EL 901
>gi|156045904|ref|XP_001589507.1| hypothetical protein SS1G_09228 [Sclerotinia sclerotiorum 1980]
gi|154693624|gb|EDN93362.1| hypothetical protein SS1G_09228 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1188
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 44/62 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLLF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLFHGIKPVFVFDGGAPILKRQ 86
Query: 209 TI 210
T+
Sbjct: 87 TV 88
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%)
Query: 206 KKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCA 265
+K+ + EK+ L ++ K R A ++ M E Q LL+LFG+P+I AP EAEAQCA
Sbjct: 856 EKENHDSYEKELKALRSQQKKDRRDADEVSHIMITECQALLRLFGIPYITAPMEAEAQCA 915
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
L G++TDDSDI+LFG VYKN F+ V Y D+
Sbjct: 916 ELVHLGLVDGIVTDDSDIFLFGGTRVYKNLFNSNKLVECYLLSDL 960
>gi|367019746|ref|XP_003659158.1| hypothetical protein MYCTH_2295852 [Myceliophthora thermophila ATCC
42464]
gi|347006425|gb|AEO53913.1| hypothetical protein MYCTH_2295852 [Myceliophthora thermophila ATCC
42464]
Length = 1244
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%)
Query: 206 KKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCA 265
+++ E++ L ++ K R A +T+ M E Q LL LFG+P+I AP EAEAQCA
Sbjct: 841 QRENQEAYERELRALRTQQKKDRRDADEVTQVMVTECQALLTLFGIPYITAPMEAEAQCA 900
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
L G++TDDSD +LFG VYKN F+ +V Y A D+
Sbjct: 901 ELVRLGLVDGIVTDDSDTFLFGGTRVYKNMFNSNKYVECYLAKDL 945
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+ +KPVFVFDGG P LK+
Sbjct: 27 LAIDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWHGVKPVFVFDGGAPALKRA 86
Query: 209 TI 210
T+
Sbjct: 87 TL 88
>gi|347833577|emb|CCD49274.1| similar to DNA excision repair protein [Botryotinia fuckeliana]
Length = 1341
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 44/62 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLLF IKPVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLFHGIKPVFVFDGGAPILKRQ 86
Query: 209 TI 210
T+
Sbjct: 87 TV 88
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 62/105 (59%)
Query: 206 KKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCA 265
+K+ + E+D L ++ K R A ++ M E Q LL+LFG+P+I AP EAEAQCA
Sbjct: 901 EKENHDSYEQDLKALRNQQKKDRRDADEVSHIMITECQALLRLFGIPYITAPMEAEAQCA 960
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
L G++TDDSDI+LFG VYKN F+ V Y + D+
Sbjct: 961 ELVRLGLVDGIVTDDSDIFLFGGTRVYKNLFNSNKLVECYLSSDL 1005
>gi|164663201|ref|XP_001732722.1| hypothetical protein MGL_0497 [Malassezia globosa CBS 7966]
gi|159106625|gb|EDP45508.1| hypothetical protein MGL_0497 [Malassezia globosa CBS 7966]
Length = 1109
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 52/72 (72%)
Query: 234 ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYK 293
IT+QM+ E Q LL++FG+P++ AP EAEAQCA L + + G+ITDDSD++LFG VY+
Sbjct: 777 ITQQMTAEIQALLRIFGLPYLTAPMEAEAQCAQLAMQHLVDGIITDDSDVFLFGGTPVYR 836
Query: 294 NFFDKKSHVLRY 305
N F+ + V Y
Sbjct: 837 NMFNNRRSVECY 848
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 166 DLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR 217
D G ++ NAHL+G RI KLLF+ IKP+FVFDGG P K++TI+ + R
Sbjct: 5 DSEGRTLSNAHLLGFLWRILKLLFYGIKPIFVFDGGAPVQKRRTIANRKHRR 56
>gi|195488056|ref|XP_002092153.1| GE14031 [Drosophila yakuba]
gi|317374898|sp|B4P5U9.1|FEN1_DROYA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194178254|gb|EDW91865.1| GE14031 [Drosophila yakuba]
Length = 387
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 79/154 (51%), Gaps = 17/154 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G P +HL+G+++R +LL IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLATVNGDPTSHLMGMFYRTIRLLDNGIKPVYVFDGKPPDLK 93
Query: 207 KQTISTLEKDRDQL------LLERG------KQTRLASTITEQMSREAQELLQLFGVPFI 254
++ + R++ + G K R +T++ + EA+ELL L GVP++
Sbjct: 94 SGELAKRAERREEAEKALKAATDAGDDAGIEKFNRRLVRVTKEHANEAKELLTLMGVPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
AP EAEAQCA+L T+D D FG+
Sbjct: 154 DAPCEAEAQCAALVKAGKVYATATEDMDALTFGS 187
>gi|312385968|gb|EFR30352.1| hypothetical protein AND_00127 [Anopheles darlingi]
Length = 385
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 17/161 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q +G + +HL+G ++R +LL IKPV+VFDG P+LK
Sbjct: 34 DASMCLYQFLIAVRAEGAQLTSVDGETTSHLMGTFYRTIRLLENGIKPVYVFDGKPPELK 93
Query: 207 KQTISTLEKDRDQLLLERGKQTRLAST------------ITEQMSREAQELLQLFGVPFI 254
++ + R++ K T + +T+Q + EA+ELL+L GVP++
Sbjct: 94 SGELNKRAERREEAQKALDKATEAGAVEDIEKFNRRLVKVTKQHANEAKELLRLMGVPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
AP EAEAQCA+L T+D D FG+ + ++
Sbjct: 154 EAPCEAEAQCAALVKAGKVYATATEDMDALTFGSNILLRHL 194
>gi|346321714|gb|EGX91313.1| DNA excision repair protein Rad2 [Cordyceps militaris CM01]
Length = 1162
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 60/104 (57%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+Q E++ QL ++ K R A +T+ M E Q LL+LFG+P+I AP EAEAQCA
Sbjct: 840 EQNRRDYEQELRQLRTQQKKDRRDADEVTQVMVSECQSLLRLFGIPYITAPMEAEAQCAE 899
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
L G++TDDSD +LFG VYKN F+ V Y ++
Sbjct: 900 LVRLGMVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYIGSEL 943
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I+P+FVFDGG P LK+
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWFGIQPIFVFDGGAPALKRA 86
Query: 209 TI 210
TI
Sbjct: 87 TI 88
>gi|400603046|gb|EJP70644.1| DNA excision repair protein [Beauveria bassiana ARSEF 2860]
Length = 1154
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 58/99 (58%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+Q E++ QL ++ K R A +T+ M E Q LL+LFG+P+I AP EAEAQCA
Sbjct: 836 EQNRRDYEQELRQLRTQQKKDRRDADEVTQVMVSECQSLLRLFGIPYITAPMEAEAQCAE 895
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
L G++TDDSD +LFG VYKN F+ V Y
Sbjct: 896 LVRLGMVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECY 934
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I+PVFVFDGG P LK+
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWFGIQPVFVFDGGAPALKRA 86
Query: 209 TI 210
TI
Sbjct: 87 TI 88
>gi|350416440|ref|XP_003490949.1| PREDICTED: flap endonuclease 1-like [Bombus impatiens]
Length = 381
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 17/161 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G + +HL+G ++R +L+ IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLTSVNGETTSHLMGTFYRTIRLVEQGIKPVYVFDGKPPNLK 93
Query: 207 KQTISTLEKDRD--QLLLERGKQT----------RLASTITEQMSREAQELLQLFGVPFI 254
++ + RD Q LL ++ R +T++ ++EA++LLQL G+P+I
Sbjct: 94 GGELAKRAERRDETQKLLRAAEEAGNAEDIEKFNRRLVKVTKEHAKEAKQLLQLMGIPYI 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
AP EAEAQCA+L T+D D FG + +
Sbjct: 154 DAPCEAEAQCAALVKAGKVFATATEDMDALTFGCNVLLRRL 194
>gi|302927330|ref|XP_003054474.1| hypothetical protein NECHADRAFT_65808 [Nectria haematococca mpVI
77-13-4]
gi|256735415|gb|EEU48761.1| hypothetical protein NECHADRAFT_65808 [Nectria haematococca mpVI
77-13-4]
Length = 1192
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 45/62 (72%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I+PVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWFGIQPVFVFDGGAPVLKRQ 86
Query: 209 TI 210
TI
Sbjct: 87 TI 88
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+Q E++ L ++ K R A +T+ M E Q LL+LFG+P+I AP EAEAQCA
Sbjct: 836 EQNKEDYERELRALRGQQKKDRRDADEVTQVMITECQALLRLFGIPYITAPMEAEAQCAE 895
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
L G++TDDSD +LFG VYKN F+ V Y D+
Sbjct: 896 LVQLGLVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYLGGDL 939
>gi|134057863|emb|CAK38230.1| unnamed protein product [Aspergillus niger]
Length = 916
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ K R A +++ M E Q+LL+LFG+P+I AP EAEAQCA L
Sbjct: 561 EQELRQLRSQQKKDRRDADEVSQVMITECQQLLRLFGLPYITAPMEAEAQCAELVSLGLV 620
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
G+ITDDSD++LFG VYKN F++ V Y D+ +
Sbjct: 621 DGIITDDSDVFLFGGTRVYKNMFNQSKFVECYLTTDLEKEY 661
>gi|390600384|gb|EIN09779.1| PIN domain-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 1103
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 202 VPQLKKQTISTLEKDRDQ----LLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAP 257
V Q+K + +S + K+ D+ L +R R + IT QM + +L+LFG+P+I AP
Sbjct: 687 VSQVKGKDLSAVRKEIDEEIRVLNQQRKAAMRDSEEITHQMVAQIMTMLRLFGIPYITAP 746
Query: 258 GEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
EAEAQCA+L G+ITDDSD++LFG + V KN F++ V + PD+
Sbjct: 747 MEAEAQCATLNELGLVDGIITDDSDVFLFGGKRVLKNMFNQSKTVECFLLPDL 799
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q D G + NAH++G RICKL+++ IKPVFVFDGG P LK+ T++
Sbjct: 30 DSSIWIYQFQATMRDKEGRGLVNAHVVGFLRRICKLMYYGIKPVFVFDGGAPALKRSTLT 89
>gi|363752988|ref|XP_003646710.1| hypothetical protein Ecym_5112 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890346|gb|AET39893.1| hypothetical protein Ecym_5112 [Eremothecium cymbalariae
DBVPG#7215]
Length = 988
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 57/93 (61%)
Query: 218 DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVI 277
D+L + K A +T +M + QELL FG+P++ AP EAEAQCA L G+I
Sbjct: 707 DELYKQYQKDMSAADEVTVEMVTQIQELLTRFGIPYVTAPMEAEAQCAELLKLKLVDGII 766
Query: 278 TDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
TDDSDI+LFG VYKN F +K+ V Y++ I
Sbjct: 767 TDDSDIFLFGGSNVYKNMFYEKAFVEYYSSDSI 799
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 57/97 (58%), Gaps = 14/97 (14%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q K T D + NAH++G + RICK+L+F +KPVFVFDGG P LK++TI
Sbjct: 30 DASIWIYQFLKATPDNGSHKLKNAHILGFFRRICKVLYFGMKPVFVFDGGAPPLKRETIR 89
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQL 248
+ R +GK+ A T AQ+LL L
Sbjct: 90 QRREAR------QGKRADAAVT--------AQKLLAL 112
>gi|302674926|ref|XP_003027147.1| hypothetical protein SCHCODRAFT_70854 [Schizophyllum commune H4-8]
gi|300100833|gb|EFI92244.1| hypothetical protein SCHCODRAFT_70854 [Schizophyllum commune H4-8]
Length = 1139
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 70/112 (62%), Gaps = 4/112 (3%)
Query: 204 QLKKQTISTLEKDRD----QLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGE 259
Q+K + ++++ + D L +R R A +T+QM + +L+LFG+P++ AP E
Sbjct: 724 QVKGRDLASVRSEIDDEITSLRQQRTAAMRAAEDVTQQMVAQIMIMLRLFGIPYMTAPME 783
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
AEAQCA+L N GVITDDSD++LFGA V+KN F++ V + A D++
Sbjct: 784 AEAQCATLVSLNLVDGVITDDSDVFLFGAARVFKNMFNQSKTVECFLAADLQ 835
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q D G + NAH++G RI KLLF+ IKPVFVFDGG P LK+ +
Sbjct: 30 DSSIWIYQFQATMRDKEGRVLVNAHVLGFLRRITKLLFYGIKPVFVFDGGAPALKR---N 86
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREA 242
TL + R++ TR+A + R+A
Sbjct: 87 TLNQRRERKTDATESHTRIAERLLAAQLRQA 117
>gi|307173481|gb|EFN64391.1| Flap endonuclease 1-B [Camponotus floridanus]
Length = 382
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 17/154 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G +HL+G +HR +L+ IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLTTVDGETTSHLMGTFHRTIRLVEQGIKPVYVFDGKPPNLK 93
Query: 207 KQTISTLEKDRD--QLLLERGKQ----------TRLASTITEQMSREAQELLQLFGVPFI 254
++ + RD Q LL+ ++ +R +T+ + EA++LLQL G+P+I
Sbjct: 94 SGELAKRAERRDEAQKLLQAAEEDGNVEAIDKFSRRLVKVTKNHADEAKQLLQLMGIPYI 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
AP EAEAQCA+L T+D D FG
Sbjct: 154 DAPCEAEAQCAALVKAGKVFATATEDMDALTFGC 187
>gi|357122637|ref|XP_003563021.1| PREDICTED: flap endonuclease 1-B-like [Brachypodium distachyon]
Length = 413
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 23/181 (12%)
Query: 152 DVSIWLHQL-----TKGTHDLA--GGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S+ ++Q KGT L G V +HL G+ +R +LL IKPVFVFDG P
Sbjct: 34 DASLSIYQFLVVVGRKGTEVLTNEAGEV-TSHLQGMLNRTVRLLEAGIKPVFVFDGEPPD 92
Query: 205 LKKQTIS--TLEKDRDQLLLERG----------KQTRLASTITEQMSREAQELLQLFGVP 252
LKK+ ++ +L +D L R K ++ IT++ + + ++LL+L GVP
Sbjct: 93 LKKRELAKRSLRRDDASEDLNRAIEVGDEDSIEKFSKRTVKITKKHNDDCKKLLRLMGVP 152
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFD---KKSHVLRYTAPD 309
+ APGEAEAQCASL + V ++D D FG+ ++ D K+S V + P
Sbjct: 153 VVEAPGEAEAQCASLCKNHKAYAVASEDMDSLTFGSLRFLRHITDLSFKRSPVTEFEVPK 212
Query: 310 I 310
+
Sbjct: 213 V 213
>gi|390368964|ref|XP_003731559.1| PREDICTED: uncharacterized protein LOC100891055, partial
[Strongylocentrotus purpuratus]
Length = 804
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 53/77 (68%), Gaps = 4/77 (5%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
DVSIWL+Q G H G S+ N HL L++RICKLLF++IKP+FVFDG PQLKKQT++
Sbjct: 30 DVSIWLNQAVLGVH---GNSLSNPHLQVLFNRICKLLFYRIKPIFVFDGAPPQLKKQTLA 86
Query: 212 TLEKDRDQLLLERGKQT 228
+ R L R ++T
Sbjct: 87 A-RRQRKNLAAARTEKT 102
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 91/168 (54%), Gaps = 22/168 (13%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKN----EMALPPPSVSR--EVDMF 54
A R+ K+ AA+ +K ++KN ++ + V+G+N LPP + R E D++
Sbjct: 86 AARRQRKNLAAARTEKTTERIVKNYMKSHAIQAVIGENGEGTSQDLPPLYIPRKNETDLY 145
Query: 55 ELPPAPAQTVQDEEEDSD-------------SDDTEAKFRYADLHSVDINSEQFSALPPD 101
ELPP P+ + ++ S+ + E + RY DL +DI SE F ALP +
Sbjct: 146 ELPPLPSNDLHEKNSGSEDEEEEDHISIAMAAHQAEMESRYQDLGELDIESESFKALPVE 205
Query: 102 MRHEILTELLEQRKLSSWHKMHEMPQNDQHSMLEFRCNIVINKLLVDL 149
++HE++TEL E K +SW +MH++P+ D +++ ++NK ++ L
Sbjct: 206 VQHELITELQESSKKNSWARMHQLPKVD---FSQYQLKKLLNKGMLRL 250
>gi|16082069|ref|NP_394495.1| flap endonuclease-1 [Thermoplasma acidophilum DSM 1728]
gi|28380022|sp|Q9HJD4.1|FEN_THEAC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|10640350|emb|CAC12164.1| DNA repair protein RAD2 related protein [Thermoplasma acidophilum]
Length = 336
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 79/133 (59%), Gaps = 14/133 (10%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTL----EKDRDQL--LLERGKQ- 227
+HL G+++R LL +I+PV+VFDG LK +TIS EK + +L +ERG++
Sbjct: 56 SHLYGIFYRTINLLENRIRPVYVFDGKPSPLKNRTISERQMMKEKAKAELEEAIERGEED 115
Query: 228 -----TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
+R+ + IT Q+ + ++LL G+P++ AP E EAQ + + N GVI+ D D
Sbjct: 116 LRQYYSRI-NYITPQIVDDTKKLLDYMGIPYVDAPSEGEAQASYMTKKN-VDGVISQDYD 173
Query: 283 IWLFGARTVYKNF 295
LFGAR + +NF
Sbjct: 174 CLLFGARKILRNF 186
>gi|403358237|gb|EJY78757.1| Flap endonuclease 1-1 [Oxytricha trifallax]
Length = 967
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 22/178 (12%)
Query: 149 LISDVSIWLHQLTKGTHDLAGG--------SVPN--AHLIGLYHRICKLLFFKIKPVFVF 198
+ D S+ ++Q T + G S N HL+G++HR + L IKP++VF
Sbjct: 31 IACDASMAIYQFLIATQTMKQGMGIGELRDSNGNLTGHLVGMFHRTIQFLESGIKPIWVF 90
Query: 199 DGGVPQLKKQTISTLEKDRDQLLLERGKQ---------TRLAS---TITEQMSREAQELL 246
DG P LK + + ++ +++ + E+ + R+A +T M R+A++LL
Sbjct: 91 DGKPPDLKNRVLDQRKETKEKAVEEKKNRIEEGDMEGAKRMAGRSVKVTWDMMRDAKKLL 150
Query: 247 QLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLR 304
+L G P I APGEAEAQCA L ++D D FG + + + F KK +++
Sbjct: 151 RLMGCPVIDAPGEAEAQCAHLVKLGLAFATASEDMDSLTFGTKVLLRGFNSKKEPIIQ 208
>gi|358387657|gb|EHK25251.1| hypothetical protein TRIVIDRAFT_208179 [Trichoderma virens Gv29-8]
Length = 1196
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+Q E++ L ++ K R A +T+ M E Q LL+LFG+P+I AP EAEAQCA
Sbjct: 868 QQNREDYERELRALRNQQKKDRRDADEVTQTMITECQALLRLFGIPYITAPMEAEAQCAE 927
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
L G++TDDSD +LFG VYKN F+ V Y D+
Sbjct: 928 LVRLGMVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYVGADL 971
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 48/70 (68%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I+PVFVFDGG P LK+
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRICKLLWFGIQPVFVFDGGAPALKRA 86
Query: 209 TISTLEKDRD 218
TI ++ R+
Sbjct: 87 TIQKRKQRRE 96
>gi|393242077|gb|EJD49596.1| hypothetical protein AURDEDRAFT_182745 [Auricularia delicata
TFB-10046 SS5]
Length = 1291
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
Query: 204 QLKKQTISTLEKDRDQLLLE----RGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGE 259
Q+K + + + ++ DQ L R R + IT+QM + LL+LFG+P+I AP E
Sbjct: 846 QVKGRNLDAVRQEIDQELFALNQARKAAQRDSEDITQQMISQIMVLLRLFGIPYITAPME 905
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
AEAQCA+L +GVITDDSD++LFG+ V+KN F++ V + A D+
Sbjct: 906 AEAQCATLVALGLVEGVITDDSDVFLFGSARVFKNMFNQSKTVECFIAGDL 956
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIWL+Q D G ++ NAH++G RICKLLF+ IKPVFVFDGG P +KK TI+
Sbjct: 30 DSSIWLYQFQATMRDKDGRALVNAHILGFLRRICKLLFYGIKPVFVFDGGAPAIKKATIT 89
Query: 212 TLEKDRDQLLLERGKQTRLASTI-TEQMSREA 242
+K + K LA I QM REA
Sbjct: 90 ERKKRKSGFAASHAK---LAERILAAQMRREA 118
>gi|189239788|ref|XP_969346.2| PREDICTED: similar to XPG-like endonuclease CG10670-PA [Tribolium
castaneum]
Length = 565
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 15/150 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSV-PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
D+S W+ + + ++ +V P +L LY R C LL + VFV +G P+LK +TI
Sbjct: 30 DLSCWVCE----SQNVTEYTVQPRMYLRNLYFRTCYLLLMDVNVVFVLEGRAPELKYKTI 85
Query: 211 STLEKDRDQLLLE-----RGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCA 265
+ R+ L + G +T+ S + R +E+L L G+ + GEAEA CA
Sbjct: 86 AA----RNALQFKGAKPKNGAKTKDRSRFNHTLKR-CEEMLSLLGLACVTGEGEAEALCA 140
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVYKNF 295
L G+I+ DSD + +GAR VY+NF
Sbjct: 141 QLNETGLVDGIISQDSDCFAYGARVVYRNF 170
>gi|825732|emb|CAA50481.1| xeroderma pigmentosum group G complementing factor [Homo sapiens]
Length = 88
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 47/62 (75%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWL+Q KG D G S+ N HL+ L+HR+CKLLFF+I+P+FVFDG P LKKQ
Sbjct: 27 LAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQ 86
Query: 209 TI 210
T+
Sbjct: 87 TL 88
>gi|342878276|gb|EGU79631.1| hypothetical protein FOXB_09914 [Fusarium oxysporum Fo5176]
Length = 1260
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 45/62 (72%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I+PVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWFGIQPVFVFDGGAPILKRQ 86
Query: 209 TI 210
TI
Sbjct: 87 TI 88
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+Q E++ L ++ K R A +T+ M E Q LL+LFG+P+I AP EAEAQCA
Sbjct: 876 EQNKEDYERELRALRNQQKKDRRDADEVTQVMITECQALLRLFGIPYITAPMEAEAQCAE 935
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
L G++TDDSD +LFG VYKN F+ V Y DI
Sbjct: 936 LVRLGLVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYLVGDI 979
>gi|323454359|gb|EGB10229.1| hypothetical protein AURANDRAFT_53007 [Aureococcus anophagefferens]
Length = 538
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 143 NKLLVDLISDVSIWLHQLTKG---THDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFD 199
+L VD + +L + G TH +HL G +R ++L KPVFVFD
Sbjct: 29 RRLAVDASMHLYSFLAAIRTGGDATHLTNSRGEATSHLQGFANRTLRMLEAGAKPVFVFD 88
Query: 200 GGVPQLKKQTIST-----------LEKDRDQ----LLLERGKQTRLASTITEQMSREAQE 244
G P+LK +T+ L + RD E K ++ +T Q + + +
Sbjct: 89 GAAPELKGKTLKGRSEAKRAAEEKLARARDADSGATTEEVYKAASASTRVTRQHNDDVKR 148
Query: 245 LLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFD 297
LL+L GVP + APGEAEA C +L V+T+D D FGA + KN FD
Sbjct: 149 LLRLMGVPVVEAPGEAEASCVALVRHGACDFVVTEDMDALTFGAAKMVKNLFD 201
>gi|401624921|gb|EJS42958.1| rad27p [Saccharomyces arboricola H-6]
Length = 382
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 15/150 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q GG + N +HL+G+++R +++ IKP +VFDG P +
Sbjct: 34 DASMSLYQFLIAVRQQDGGQLTNEAGETTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPDM 93
Query: 206 KKQTISTLEKDRDQLL---------LERGKQTRLASTITEQMSREAQELLQLFGVPFIVA 256
K ++ R++ LE+ KQ R ++++ + EAQ+LL L G+P+I+A
Sbjct: 94 KSHELTKRSSRREETERKLAEATTELEKMKQERRLVKVSKEHNEEAQKLLGLMGIPYIIA 153
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLF 286
P EAEAQCA L ++D D +
Sbjct: 154 PTEAEAQCAELAKKGKVYAAASEDMDTLCY 183
>gi|363806970|ref|NP_001242313.1| flap endonuclease 1 [Glycine max]
gi|317376195|sp|C6TEX6.1|FEN1_SOYBN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|255640175|gb|ACU20378.1| unknown [Glycine max]
Length = 382
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 89/181 (49%), Gaps = 23/181 (12%)
Query: 152 DVSIWLHQL-----TKGTHDLA--GGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S+ ++Q GT L G V +HL G++ R +LL IKPV+VFDG P
Sbjct: 34 DASMSIYQFLIVVGRSGTEMLTNEAGEV-TSHLQGMFSRTIRLLEAGIKPVYVFDGKPPD 92
Query: 205 LKKQTISTLEKDRDQLL------LERG------KQTRLASTITEQMSREAQELLQLFGVP 252
LKKQ ++ R + LE K ++ +T+Q + + + LL+L GVP
Sbjct: 93 LKKQELAKRYSKRAEATEDLSEALETANKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVP 152
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFD---KKSHVLRYTAPD 309
+ AP EAEAQCA+L GV+++D D FGA ++ D KK V+ +
Sbjct: 153 VVEAPSEAEAQCAALCKAGKVYGVVSEDMDSLTFGAPKFLRHLMDPSSKKIPVMEFEVAK 212
Query: 310 I 310
I
Sbjct: 213 I 213
>gi|195014132|ref|XP_001983964.1| GH15274 [Drosophila grimshawi]
gi|193897446|gb|EDV96312.1| GH15274 [Drosophila grimshawi]
Length = 749
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 20/171 (11%)
Query: 138 CNIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFV 197
C + K+ +DL V L+ + H P HL L+ R C L++ ++ PVFV
Sbjct: 20 CELRGKKVAIDLAGWVCESLNVVDYFVH-------PRHHLKNLFFRTCYLIWEQVTPVFV 72
Query: 198 FDGGVPQLKKQTISTLE---------KDRDQLLLERGKQTRL----ASTITEQMSREAQE 244
+G P+LK Q I+ KD+D+ KQ L T + ++ +
Sbjct: 73 LEGVAPKLKSQVIAKRNELQFRGVRPKDKDKDAQAPPKQAALNGDKGRTRFNNVLKQCEN 132
Query: 245 LLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
LL G+ + PGEAEA CA L GVI+ DSD + +GAR VY+NF
Sbjct: 133 LLLSMGIQCVQGPGEAEAYCAFLNKYGLVDGVISQDSDCFAYGARRVYRNF 183
>gi|340376739|ref|XP_003386889.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Amphimedon queenslandica]
Length = 739
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L DVSIWL+Q KG D G +P HL+ L++RICKLLF++I+PVFVFDG P LK +
Sbjct: 27 LAVDVSIWLNQAIKGARDHHGNEIPKPHLLVLFNRICKLLFYQIRPVFVFDGPPPPLKTK 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVA 256
T L L R K+ E M + +++LL+ + I
Sbjct: 87 T----------LELRRRKRKEAGKAAGELMDKRSRKLLEAQAIKTITG 124
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 245 LLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLR 304
LL+LFG+P++ +P EAEAQC++LE + TQG ITDD+D++LFG VY++ F V
Sbjct: 456 LLRLFGLPYLESPSEAEAQCSTLESLSLTQGTITDDNDVFLFGGMNVYRHMFTGSHDVEY 515
Query: 305 YTAPDI 310
Y DI
Sbjct: 516 YRNADI 521
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Query: 3 RKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMALPP--PSVSREVDMFELPPAP 60
R+ + +A A ++ + LLE Q + + GK E+ +P + E DMF LP
Sbjct: 91 RRRKRKEAGKAAGELMDKRSRKLLEAQAIKTITGK-ELDIPSYIKKTNIEEDMFYLPEKD 149
Query: 61 AQTV-QDEEEDSDSDDTEA--KFRYADLHSVDINSEQFSALPPDMRHEILTELLEQRKLS 117
+ V Q EE S+ +DT Y D ++D+NSE FS LPP+++H++L E E+ + +
Sbjct: 150 SALVNQSIEEISEHEDTNYFDDHSYRDDDNIDVNSESFSCLPPEIQHDLLLEKKEKERTA 209
Query: 118 SWHKM 122
M
Sbjct: 210 RCDPM 214
>gi|193643497|ref|XP_001947849.1| PREDICTED: flap endonuclease GEN-like [Acyrthosiphon pisum]
Length = 477
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 75/148 (50%), Gaps = 16/148 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S W+ H++ S N +L L+ R C LL P+FVFDG P LK S
Sbjct: 30 DLSGWVCDSENLNHNI---SQKNMYLRNLFFRTCNLLLIGAIPIFVFDGEPPLLK---YS 83
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQ----MSREAQELLQLFGVPFIVAPGEAEAQCASL 267
T+EK + G + + + I + + ++ + LL + GV + GEAE CA L
Sbjct: 84 TIEKRIN------GNKAPIKTNIIRKRLNSLQKQCELLLNIMGVTCVYGHGEAEQLCAIL 137
Query: 268 ELGNHTQGVITDDSDIWLFGARTVYKNF 295
G++T DSD +L+GAR VY+NF
Sbjct: 138 NKNGIVNGIVTQDSDCFLYGARVVYRNF 165
>gi|193659550|ref|XP_001944971.1| PREDICTED: flap endonuclease 1 [Acyrthosiphon pisum]
Length = 380
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 84/170 (49%), Gaps = 23/170 (13%)
Query: 139 NIVINKLLVDLISDVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIK 193
N + N + D S+ L+Q ++G + +H++G ++R +LL IK
Sbjct: 21 NEIKNHFGRKIAIDASMSLYQFLIAVRSEGAQLTSADGETTSHIMGTFYRTIRLLENGIK 80
Query: 194 PVFVFDGGVPQLKKQTISTLEKDRD-----QLLLERGKQTRLASTI----------TEQM 238
PV+VFDG PQ+K S LEK D Q LE+ ++ A+ I T
Sbjct: 81 PVYVFDGKPPQMKS---SELEKRADRRQEAQKSLEKAEEAGDATGIDKFSKRLVKVTSTH 137
Query: 239 SREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
+ E +ELL+L GVPF+ AP EAEAQCA++ T+D D FG+
Sbjct: 138 TTECKELLKLMGVPFVEAPCEAEAQCAAMVKAGKVYATATEDMDALTFGS 187
>gi|270011949|gb|EFA08397.1| hypothetical protein TcasGA2_TC006044 [Tribolium castaneum]
Length = 591
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 15/150 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSV-PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
D+S W+ + + ++ +V P +L LY R C LL + VFV +G P+LK +TI
Sbjct: 30 DLSCWVCE----SQNVTEYTVQPRMYLRNLYFRTCYLLLMDVNVVFVLEGRAPELKYKTI 85
Query: 211 STLEKDRDQLLLE-----RGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCA 265
+ R+ L + G +T+ S + R +E+L L G+ + GEAEA CA
Sbjct: 86 AA----RNALQFKGAKPKNGAKTKDRSRFNHTLKR-CEEMLSLLGLACVTGEGEAEALCA 140
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVYKNF 295
L G+I+ DSD + +GAR VY+NF
Sbjct: 141 QLNETGLVDGIISQDSDCFAYGARVVYRNF 170
>gi|171687395|ref|XP_001908638.1| hypothetical protein [Podospora anserina S mat+]
gi|170943659|emb|CAP69311.1| unnamed protein product [Podospora anserina S mat+]
Length = 1280
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 62/107 (57%)
Query: 204 QLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQ 263
+ +++ E++ L ++ K R A +T+ M E Q LL+LFGVP+I AP EAEAQ
Sbjct: 871 KTQRENQEAYEQELRALRTQQKKDRRDADEVTQVMVTECQALLRLFGVPYITAPMEAEAQ 930
Query: 264 CASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
CA L N G++TDDSD +LFG VYKN F+ V Y D+
Sbjct: 931 CAELVRLNLVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYLLRDL 977
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + R+CKLL++ +KPVFVFDGG P LK+
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHIVGFFRRLCKLLWYGVKPVFVFDGGAPALKRA 86
Query: 209 TI 210
T+
Sbjct: 87 TL 88
>gi|303270955|ref|XP_003054839.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462813|gb|EEH60091.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 237
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 50/70 (71%)
Query: 238 MSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFD 297
M E Q+LL LFG+P+I+AP EAEAQCA L+ VITDDSD +LFGA+T+Y+N F+
Sbjct: 1 MHAEVQQLLTLFGIPYIIAPQEAEAQCAWLDREGFVDAVITDDSDAFLFGAKTIYRNVFE 60
Query: 298 KKSHVLRYTA 307
K +V Y A
Sbjct: 61 SKKYVEFYDA 70
>gi|413932541|gb|AFW67092.1| hypothetical protein ZEAMMB73_718764 [Zea mays]
Length = 411
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 23/176 (13%)
Query: 152 DVSIWLHQL-----TKGTHDLA--GGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S+ ++Q KG+ L G + +HL G+ +R ++L IKPVFVFDG P+
Sbjct: 34 DASVSIYQFLAVVGRKGSELLTNEAGEI-TSHLQGMLNRTIRMLEAGIKPVFVFDGEPPE 92
Query: 205 LKKQTISTLEKDRDQLL------LERG------KQTRLASTITEQMSREAQELLQLFGVP 252
+KK+ ++ RD + +E G K ++ +T + + + + LL+L GVP
Sbjct: 93 MKKKELAKRSLKRDDAIKDLNRAMEIGDENAIEKFSKRTVKVTGRHNDDCKRLLRLMGVP 152
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFD---KKSHVLRY 305
+ APGEAEAQCA+L + V ++D D FGAR ++ D KKS V +
Sbjct: 153 VVEAPGEAEAQCAALCENHQVYAVASEDMDTLTFGARRFLRHLTDLGYKKSPVTEF 208
>gi|118596598|dbj|BAF37958.1| flap endonuclease-1 [Thermoplasma sp. S02]
Length = 336
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 80/133 (60%), Gaps = 14/133 (10%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS--TLEKDRDQLLL----ERGKQ- 227
+HL G+++R LL +I+PV+VFDG LK +TIS L K++ ++ L ERG++
Sbjct: 56 SHLYGIFYRTINLLENRIRPVYVFDGKPSPLKNRTISERQLMKEKAKVELEEAIERGEED 115
Query: 228 -----TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
+R+ + IT Q+ + ++LL G+P++ AP E EAQ + + N GVI+ D D
Sbjct: 116 LRQYYSRI-NYITPQIVDDTKKLLDYMGIPYVDAPSEGEAQASYMTKKN-VDGVISQDYD 173
Query: 283 IWLFGARTVYKNF 295
LFGAR + +NF
Sbjct: 174 CLLFGARKILRNF 186
>gi|291242835|ref|XP_002741315.1| PREDICTED: flap endonuclease 1-like [Saccoglossus kowalevskii]
Length = 334
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S W+ +A + HL L++R+ L I+PVFV DG P+LK +
Sbjct: 30 DLSSWI------CESIAAVNAFKPHLRNLFYRVVNLSRLNIQPVFVIDGDPPELKSNELV 83
Query: 212 TLEKDRDQLLLERG-KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ + G K+ + T + + E +LL + GVP+I A GEAEA CA L
Sbjct: 84 KRAHIQGDSKNKHGEKKPGMQRTRLKTLQYECCKLLDVLGVPYIQATGEAEAMCALLNKE 143
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDI 310
GV T+D D +L+GA+ VYKN SHV Y DI
Sbjct: 144 GLVDGVFTEDGDAFLYGAKKVYKNLTAGSNGSHVDVYDMLDI 185
>gi|410955794|ref|XP_003984535.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease GEN homolog 1
[Felis catus]
Length = 913
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 180 LYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR----DQLLLERGKQTRLASTIT 235
L RI L +K VFV +G P+LK IS + R + ++ ++ S +
Sbjct: 65 LIFRISYLTLMDVKLVFVMEGEPPKLKADVISRRNQTRYGPSGKTWSQKTGRSHFKSVL- 123
Query: 236 EQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
+E ++L+ G+P++ A GEAEA CA L + G +T+D D +L+GA+TVY+NF
Sbjct: 124 ----KECLDMLECLGIPWVQAAGEAEAMCAYLNASGYVDGCLTNDGDAFLYGAQTVYRNF 179
Query: 296 F--DKKSHVLRYTAPDIR 311
K HV YT P I+
Sbjct: 180 SMNTKDPHVDCYTMPSIK 197
>gi|408388533|gb|EKJ68217.1| hypothetical protein FPSE_11684 [Fusarium pseudograminearum CS3096]
Length = 1224
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+F I PVFVFDGG P LK+Q
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWFGILPVFVFDGGAPVLKRQ 86
Query: 209 TISTLEKDRD 218
TI ++ R+
Sbjct: 87 TIQHRKQRRE 96
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+Q E++ L ++ K R A +T+ M E Q LL+LFG+P++ AP EAEAQCA
Sbjct: 867 EQNKEDYERELRALRTQQKKDRRDADEVTQVMITECQALLRLFGIPYVTAPMEAEAQCAE 926
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
L G++TDDSD +LFG VYKN F+ V Y DI
Sbjct: 927 LVNLGLVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYLVSDI 970
>gi|195153018|ref|XP_002017429.1| GL21530 [Drosophila persimilis]
gi|194112486|gb|EDW34529.1| GL21530 [Drosophila persimilis]
Length = 578
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 129/272 (47%), Gaps = 47/272 (17%)
Query: 1 AQRKTLKSKAASNADKVRSDLLKNLLEQQLLNDVLGKNEMAL-------PPPSVSR--EV 51
A+R+ ++K ++ AD++++ LL++L ++++ LGKN L PPPS S+ E
Sbjct: 39 ARRQQQRNKLSNEADRIQALLLQSLAREKVVQQALGKNAELLLKSPVKRPPPSKSKNDED 98
Query: 52 DMFELPPAPAQTV-QDEEEDSDSD---------------DTEAKFRY-ADLHSVDINSEQ 94
D+F+LP PA QD ++S D ++ A+ Y + L ++D+ S+
Sbjct: 99 DLFKLPELPALAAGQDNPDESGQDLDYTSASATSDSSFDESTARHAYNSSLQAIDVKSQN 158
Query: 95 FSALPPDMRHEILTELLEQRKLSSWHKMHEMPQNDQHSMLEFRCNIVINKLLVDLISDVS 154
F LP D+RHE LT++ E RK SSW ++HE+P +F C+ + +LL S
Sbjct: 159 FKNLPADVRHEKLTDIKETRKQSSWGRLHELPARSD----DF-CSFQMKRLLKRRAVQES 213
Query: 155 IWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLE 214
+ + G H L Y +C FF + + V + Q +Q +
Sbjct: 214 LEQAEQEMGGHTLT------------YSELCD--FFSEEGI-VTPTAIEQSTRQIMQICS 258
Query: 215 KDRDQLLLERG-KQTRLASTITEQMSREAQEL 245
+ + LL R K+ L ST TE +EL
Sbjct: 259 DEHTRFLLVRDLKKKALESTKTEMKMETIEEL 290
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 49/67 (73%), Gaps = 3/67 (4%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLASTI 234
+++GL+HR+CKLL+++++PVF+FDG PQLK+ TI+ ++ R++L + R+ + +
Sbjct: 3 TYVLGLFHRLCKLLYYRVRPVFIFDGCTPQLKRDTIARRQQQRNKL---SNEADRIQALL 59
Query: 235 TEQMSRE 241
+ ++RE
Sbjct: 60 LQSLARE 66
>gi|115465159|ref|NP_001056179.1| Os05g0540100 [Oryza sativa Japonica Group]
gi|62510701|sp|Q9SXQ6.1|FEN11_ORYSJ RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A; AltName:
Full=OsFEN-1a
gi|4587225|dbj|BAA36171.1| FEN-1 [Oryza sativa Japonica Group]
gi|113579730|dbj|BAF18093.1| Os05g0540100 [Oryza sativa Japonica Group]
gi|222632398|gb|EEE64530.1| hypothetical protein OsJ_19381 [Oryza sativa Japonica Group]
Length = 380
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 12/139 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------LERG-- 225
+HL G+++R +LL IKPV+VFDG P LKKQ ++ R+ +E G
Sbjct: 62 TSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKREDATKELTEAVEEGDK 121
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K ++ +T+Q + E + LL+L GVP + AP EAEA+CA+L + + V ++D
Sbjct: 122 DAIEKFSKRTVKVTKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMVYAVASEDM 181
Query: 282 DIWLFGARTVYKNFFDKKS 300
D FGA ++ D S
Sbjct: 182 DSLTFGAPRFLRHLMDPSS 200
>gi|317374863|sp|B8AW67.1|FEN11_ORYSI RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A
gi|218197185|gb|EEC79612.1| hypothetical protein OsI_20807 [Oryza sativa Indica Group]
Length = 380
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 12/139 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------LERG-- 225
+HL G+++R +LL IKPV+VFDG P LKKQ ++ R+ +E G
Sbjct: 62 TSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKREDATKELTEAVEEGDK 121
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K ++ +T+Q + E + LL+L GVP + AP EAEA+CA+L + + V ++D
Sbjct: 122 DAIEKFSKRTVKVTKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMVYAVASEDM 181
Query: 282 DIWLFGARTVYKNFFDKKS 300
D FGA ++ D S
Sbjct: 182 DSLTFGAPRFLRHLMDPSS 200
>gi|380474820|emb|CCF45572.1| DNA-repair protein rad13 [Colletotrichum higginsianum]
Length = 622
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%)
Query: 206 KKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCA 265
+++ E++ L ++ K R A +T+ M E Q LL+LFG+P+I AP EAEAQCA
Sbjct: 252 ERENKEAYERELKALRTQQKKDRRDADEVTQVMVTECQALLRLFGIPYITAPMEAEAQCA 311
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
L + G++TDDSD +LFG +YKN F+ V Y D+
Sbjct: 312 ELVRMSLVDGIVTDDSDCFLFGGTRIYKNMFNSNKFVECYLGSDL 356
>gi|307184932|gb|EFN71197.1| Flap endonuclease GEN [Camponotus floridanus]
Length = 738
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%)
Query: 173 PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAS 232
P +L LY R LL I PVFV +G P LK +TI+ R + +
Sbjct: 48 PKMYLRNLYFRTAFLLMQGISPVFVLEGKAPTLKHKTIARRNDVRSGFQERKEAAKKGGR 107
Query: 233 TITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVY 292
T ++ E +E+L+ G+ + + GEAEA CA L G ++ DSD +L+GA+ VY
Sbjct: 108 TQFNRVLNECKEMLKFMGIACVQSYGEAEAMCAYLNENGLVDGCVSQDSDCFLYGAKIVY 167
Query: 293 KNFFDKKSH 301
+NF K +
Sbjct: 168 RNFCTSKGN 176
>gi|413932542|gb|AFW67093.1| hypothetical protein ZEAMMB73_718764 [Zea mays]
Length = 294
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 23/181 (12%)
Query: 152 DVSIWLHQL-----TKGTHDLA--GGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S+ ++Q KG+ L G + +HL G+ +R ++L IKPVFVFDG P+
Sbjct: 34 DASVSIYQFLAVVGRKGSELLTNEAGEI-TSHLQGMLNRTIRMLEAGIKPVFVFDGEPPE 92
Query: 205 LKKQTISTLEKDRDQLL------LERG------KQTRLASTITEQMSREAQELLQLFGVP 252
+KK+ ++ RD + +E G K ++ +T + + + + LL+L GVP
Sbjct: 93 MKKKELAKRSLKRDDAIKDLNRAMEIGDENAIEKFSKRTVKVTGRHNDDCKRLLRLMGVP 152
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFD---KKSHVLRYTAPD 309
+ APGEAEAQCA+L + V ++D D FGAR ++ D KKS V +
Sbjct: 153 VVEAPGEAEAQCAALCENHQVYAVASEDMDTLTFGARRFLRHLTDLGYKKSPVTEFDVSK 212
Query: 310 I 310
+
Sbjct: 213 V 213
>gi|255711770|ref|XP_002552168.1| KLTH0B08756p [Lachancea thermotolerans]
gi|238933546|emb|CAR21730.1| KLTH0B08756p [Lachancea thermotolerans CBS 6340]
Length = 1023
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ +H++G + RICKLL+F IKPVFVFDGG P LK++
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNAMRYSHVVGFFRRICKLLYFGIKPVFVFDGGAPALKRR 86
Query: 209 TISTLEKDR 217
TI ++ R
Sbjct: 87 TIQQRKERR 95
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%)
Query: 226 KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWL 285
+ R + +T M E Q+LL FG+PF+ AP EAEAQCA L + G+ITDDSDI+L
Sbjct: 748 RDKRDSDEVTAAMVAEVQDLLTRFGIPFMTAPMEAEAQCAELLMLGLVDGIITDDSDIFL 807
Query: 286 FGARTVYKNFFDKKSHVLRY 305
FG VYKN F +K++V Y
Sbjct: 808 FGGDKVYKNMFQEKNYVEYY 827
>gi|389749913|gb|EIM91084.1| PIN domain-like protein [Stereum hirsutum FP-91666 SS1]
Length = 1350
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q D G ++ NAHL+G RICKLLF+ IKPVFVFDGG P LK+ TIS
Sbjct: 30 DSSIWIYQFQATMRDKEGRALVNAHLVGFLRRICKLLFYGIKPVFVFDGGAPALKRATIS 89
Query: 212 TLEKDRDQLLLERGK-QTRLASTITEQMSREA 242
+K + K RL + QM REA
Sbjct: 90 ERKKKKSGAAASHVKIAERL---LAAQMRREA 118
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 202 VPQLKKQTISTLEKDRDQ----LLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAP 257
+ Q+K + + ++ ++ D+ L +R R + +T+ M + +L+LFG+P+I AP
Sbjct: 866 ISQVKGKDLDSVRREIDEEIKGLNQQRKAAMRDSEDVTQHMISQIMIMLRLFGIPYITAP 925
Query: 258 GEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHV 302
EAEAQCA+L +G+ITDDSD++LFG V+KN F++ V
Sbjct: 926 MEAEAQCATLVQLGLVEGIITDDSDVFLFGGLRVFKNMFNQSKTV 970
>gi|349579452|dbj|GAA24614.1| K7_Rad27p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 382
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q GG + N +HL+G+++R +++ IKP +VFDG P L
Sbjct: 34 DASMSLYQFLIAVRQQDGGQLTNEAGETTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPDL 93
Query: 206 KKQTISTLEKDRDQLL---------LERGKQTRLASTITEQMSREAQELLQLFGVPFIVA 256
K ++ R + LE+ KQ R ++++ + EAQ+LL L G+P+I+A
Sbjct: 94 KSHELTKRSSRRVETEKKLAEATTELEKMKQERRLVKVSKEHNEEAQKLLGLMGIPYIIA 153
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLF 286
P EAEAQCA L ++D D +
Sbjct: 154 PTEAEAQCAELAKKGKVYAAASEDMDTLCY 183
>gi|426199083|gb|EKV49008.1| hypothetical protein AGABI2DRAFT_217997 [Agaricus bisporus var.
bisporus H97]
Length = 1160
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 204 QLKKQTISTLEKDRDQ----LLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGE 259
Q+K + ++ ++K+ D L +R R + IT+QM + +L+LFG+P+I AP E
Sbjct: 747 QVKGRNLNDVQKEIDDEIKILNDQRKAAMRDSEDITQQMISQIMTMLRLFGIPYITAPME 806
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHV 302
AEAQCA L GVITDDSD++LFGA+ VYKN F++ V
Sbjct: 807 AEAQCAELVSLGLVDGVITDDSDVFLFGAQRVYKNMFNQSKTV 849
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q D G + NAH++G RI KLLF+ IKPVFVFDGG P +K+ T+S
Sbjct: 30 DSSIWIYQFQATMRDKEGRGLVNAHVLGFLRRITKLLFYGIKPVFVFDGGAPVIKRATLS 89
Query: 212 TLEKDRDQLLLERGKQTRLAST-ITEQMSREA 242
+K + +L R+A + Q+ +EA
Sbjct: 90 ERKKKKSGAVL---SHARIAERLLAAQLRKEA 118
>gi|330795648|ref|XP_003285884.1| hypothetical protein DICPUDRAFT_30018 [Dictyostelium purpureum]
gi|325084189|gb|EGC37623.1| hypothetical protein DICPUDRAFT_30018 [Dictyostelium purpureum]
Length = 88
Score = 84.0 bits (206), Expect = 8e-14, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 130 QHSMLEFRCNIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLF 189
Q S E N + K+L D SIW+H + + G +PNAHL+G + RICKLL
Sbjct: 11 QQSGTEIDINALEGKILA---IDASIWIHTFVRALKNEKGDPIPNAHLLGFFKRICKLLS 67
Query: 190 FKIKPVFVFDGGVPQLKKQTI 210
++KP+FVFDGG+P LKK+TI
Sbjct: 68 LRVKPIFVFDGGIPYLKKKTI 88
>gi|403413406|emb|CCM00106.1| predicted protein [Fibroporia radiculosa]
Length = 2893
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q D G + NAH++G RICKLLF+ IKPVFVFDGG P LK+ TI+
Sbjct: 1660 DSSIWIYQFQATMRDKEGRGLVNAHVLGFLRRICKLLFYGIKPVFVFDGGAPVLKRATIA 1719
Query: 212 TLEKDRDQLLLERGK-QTRLASTITEQMSREAQELLQ 247
+K + L K RL + QM REA +Q
Sbjct: 1720 ERKKKKSGAALSHAKVAERL---LAAQMRREALNQVQ 1753
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 46/69 (66%)
Query: 234 ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYK 293
IT+QM + +L+LFG+P+I AP EAEAQCA L G+ITDDSD++LFG V K
Sbjct: 2494 ITQQMISQIMIMLRLFGIPYITAPMEAEAQCAELLSLGLVDGIITDDSDVFLFGGMRVLK 2553
Query: 294 NFFDKKSHV 302
N F++ V
Sbjct: 2554 NMFNQSKTV 2562
>gi|353238841|emb|CCA70774.1| related to RAD2-structure-specific nuclease of the nucleotide
excision repairosome [Piriformospora indica DSM 11827]
Length = 1153
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 72/112 (64%), Gaps = 4/112 (3%)
Query: 204 QLKKQTISTLEKDRDQLL--LERGKQT--RLASTITEQMSREAQELLQLFGVPFIVAPGE 259
Q+K + + T+ ++ DQ + L + ++ R + IT+QM + LL+LFG+P+I AP E
Sbjct: 741 QVKGRDLDTVREEIDQEIKQLNQARKVLQRDSEEITQQMVSQIMMLLRLFGIPYITAPME 800
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
AEAQCA L +GVITDDSD++LFGA V+KN F++ V + A D++
Sbjct: 801 AEAQCAKLLSLGLVEGVITDDSDVFLFGATRVFKNMFNQSKTVECFLAADLQ 852
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 41/62 (66%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q D G + NAHL+G RICKLLF+ IKPVFVFDGG P LK+
Sbjct: 27 LAIDSSIWIYQFQATMRDKEGRGLVNAHLLGFLRRICKLLFYGIKPVFVFDGGAPALKRS 86
Query: 209 TI 210
TI
Sbjct: 87 TI 88
>gi|48477300|ref|YP_023006.1| flap endonuclease-1 [Picrophilus torridus DSM 9790]
gi|73919351|sp|Q6L2I9.1|FEN_PICTO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|48429948|gb|AAT42813.1| RAD-2/FEN-1 exonuclease [Picrophilus torridus DSM 9790]
Length = 338
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 76/134 (56%), Gaps = 14/134 (10%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS--TLEKDRDQLLLE--------- 223
+HL G+++R LL IKPV+VFDG LK +T+ +L K+++ + LE
Sbjct: 56 SHLSGIFYRTSNLLENNIKPVYVFDGKPFHLKSETLRERSLIKEKNIMKLEEAIASNDDA 115
Query: 224 --RGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +R+ + IT+ + E++ LL L G+P++ AP E EAQ + + L V++ D
Sbjct: 116 KIRSLSSRI-NYITDDIVNESKTLLNLMGLPYVQAPSEGEAQASYMTLKGDVNAVVSQDY 174
Query: 282 DIWLFGARTVYKNF 295
D LFGA+ + +NF
Sbjct: 175 DCLLFGAKRILRNF 188
>gi|357132761|ref|XP_003567997.1| PREDICTED: flap endonuclease 1-A-like [Brachypodium distachyon]
Length = 380
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 12/140 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAST 233
+HL G+++R +LL IKPV+VFDG P +KKQ ++ R+ E K T
Sbjct: 62 TSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDMKKQELAKRYAKREDATEELTKAVETGDT 121
Query: 234 ------------ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
+T+Q + + + LL+L GVP + AP EAEAQCA+L + + V ++D
Sbjct: 122 DAIERFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPCEAEAQCAALCIKDKVYAVASEDM 181
Query: 282 DIWLFGARTVYKNFFDKKSH 301
D FGA ++ D S
Sbjct: 182 DSLTFGAPRFVRHLMDPSSR 201
>gi|323354056|gb|EGA85902.1| Rad27p [Saccharomyces cerevisiae VL3]
Length = 382
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q GG + N +HL+G+++R +++ IKP +VFDG P L
Sbjct: 34 DASMSLYQFLIAVRQQDGGQLTNEAGETTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPDL 93
Query: 206 KKQTISTLEKDRDQLL---------LERGKQTRLASTITEQMSREAQELLQLFGVPFIVA 256
K ++ R + LE+ KQ R ++++ + EAQ+LL L G+P+I+A
Sbjct: 94 KSHELTKRSSRRVETEKKLAEATTELEKMKQERRLVKVSKEHNEEAQKLLGLMGIPYIIA 153
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLF 286
P EAEAQCA L ++D D +
Sbjct: 154 PTEAEAQCAELAKKGKVYAAASEDMDTLCY 183
>gi|323332740|gb|EGA74145.1| Rad27p [Saccharomyces cerevisiae AWRI796]
Length = 370
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q GG + N +HL+G+++R +++ IKP +VFDG P L
Sbjct: 22 DASMSLYQFLIAVRQQDGGQLTNEAGETTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPDL 81
Query: 206 KKQTISTLEKDRDQLL---------LERGKQTRLASTITEQMSREAQELLQLFGVPFIVA 256
K ++ R + LE+ KQ R ++++ + EAQ+LL L G+P+I+A
Sbjct: 82 KSHELTKRSSRRVETEKKLAEATTELEKMKQERRLVKVSKEHNEEAQKLLGLMGIPYIIA 141
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLF 286
P EAEAQCA L ++D D +
Sbjct: 142 PTEAEAQCAELAKKGKVYAAASEDMDTLCY 171
>gi|336370553|gb|EGN98893.1| hypothetical protein SERLA73DRAFT_108084 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1055
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q D G ++ NAH++G RICKLLF+ I+PVFVFDGG P LK+
Sbjct: 27 LAIDSSIWIYQFQATMRDKDGRALVNAHVLGFLRRICKLLFYGIRPVFVFDGGAPALKRN 86
Query: 209 TISTLEKDRDQLLLERGKQTRLAST-ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASL 267
TIS +K + + +LA + Q+ REA Q P V+ G+ +A S+
Sbjct: 87 TISERKKKKSGAAV---SHVKLAERLLAAQLRREALGHAQANRPP--VSKGKGKAPAGSV 141
Query: 268 ELGNHT 273
+ +T
Sbjct: 142 MINENT 147
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 229 RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
R + IT+QM + LL+LFG+P+I AP EAEAQCA L G+ITDDSD++LFG
Sbjct: 734 RDSEDITQQMISQIMLLLRLFGIPYITAPMEAEAQCAELVSLGLVDGIITDDSDVFLFGG 793
Query: 289 RTVYKNFFDKKSHV 302
+ V+KN F++ V
Sbjct: 794 QRVFKNMFNQSKTV 807
>gi|317376169|sp|B3LQY3.1|FEN1_YEAS1 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190409721|gb|EDV12986.1| structure-specific endonuclease RAD27 [Saccharomyces cerevisiae
RM11-1a]
Length = 382
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q GG + N +HL+G+++R +++ IKP +VFDG P L
Sbjct: 34 DASMSLYQFLIAVRQQDGGQLTNEAGETTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPDL 93
Query: 206 KKQTISTLEKDRDQLL---------LERGKQTRLASTITEQMSREAQELLQLFGVPFIVA 256
K ++ R + LE+ KQ R ++++ + EAQ+LL L G+P+I+A
Sbjct: 94 KSHELTKRSSRRVETEKKLAEATTELEKMKQERRLVKVSKEHNEEAQKLLGLMGIPYIIA 153
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLF 286
P EAEAQCA L ++D D +
Sbjct: 154 PTEAEAQCAELAKKGKVYAAASEDMDTLCY 183
>gi|6322736|ref|NP_012809.1| Rad27p [Saccharomyces cerevisiae S288c]
gi|140964|sp|P26793.1|FEN1_YEAST RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1; AltName: Full=RAD2
homolog nuclease 1; Short=RTH1 nuclease; AltName:
Full=Structure-specific endonuclease RAD27
gi|317376170|sp|C7GVJ8.1|FEN1_YEAS2 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|317376171|sp|A6ZZK4.1|FEN1_YEAS7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|317376172|sp|C8ZC62.1|FEN1_YEAS8 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|248392|gb|AAB21998.1| RAD2 homolog [Saccharomyces cerevisiae]
gi|486190|emb|CAA81953.1| RAD27 [Saccharomyces cerevisiae]
gi|151941690|gb|EDN60052.1| 5'-3'-exonuclease [Saccharomyces cerevisiae YJM789]
gi|256269907|gb|EEU05165.1| Rad27p [Saccharomyces cerevisiae JAY291]
gi|259147728|emb|CAY80978.1| Rad27p [Saccharomyces cerevisiae EC1118]
gi|285813148|tpg|DAA09045.1| TPA: Rad27p [Saccharomyces cerevisiae S288c]
gi|323347750|gb|EGA82014.1| Rad27p [Saccharomyces cerevisiae Lalvin QA23]
gi|365764563|gb|EHN06085.1| Rad27p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298324|gb|EIW09422.1| Rad27p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 382
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q GG + N +HL+G+++R +++ IKP +VFDG P L
Sbjct: 34 DASMSLYQFLIAVRQQDGGQLTNEAGETTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPDL 93
Query: 206 KKQTISTLEKDRDQLL---------LERGKQTRLASTITEQMSREAQELLQLFGVPFIVA 256
K ++ R + LE+ KQ R ++++ + EAQ+LL L G+P+I+A
Sbjct: 94 KSHELTKRSSRRVETEKKLAEATTELEKMKQERRLVKVSKEHNEEAQKLLGLMGIPYIIA 153
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLF 286
P EAEAQCA L ++D D +
Sbjct: 154 PTEAEAQCAELAKKGKVYAAASEDMDTLCY 183
>gi|407034393|gb|EKE37191.1| flap nuclease, putative [Entamoeba nuttalli P19]
Length = 376
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 21/180 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSV------PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D SI ++Q D G ++ +H+IG ++R KL+ IKPV+VFDG P++
Sbjct: 34 DASILVYQFISAVRDTTGATMVDEFGETTSHIIGTFYRTIKLIESGIKPVYVFDGKPPEM 93
Query: 206 KKQTIS----TLEKDRDQL--LLERG------KQTRLASTITEQMSREAQELLQLFGVPF 253
K ++ +K ++QL LE G K + + +T++ S E ++LLQL G+P
Sbjct: 94 KDGELNKRKENAQKAQEQLDKALEEGDKEQAKKLMKRTARMTKEQSDEVKKLLQLMGIPC 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFF---DKKSHVLRYTAPDI 310
I A EAE CA+L T+D D G+ V + F +KK + Y+ I
Sbjct: 154 IEANCEAEGSCAALVKAGKCYATATEDMDALTLGSEHVVRKFSASDNKKDPIREYSLSSI 213
>gi|366994432|ref|XP_003676980.1| hypothetical protein NCAS_0F01410 [Naumovozyma castellii CBS 4309]
gi|342302848|emb|CCC70625.1| hypothetical protein NCAS_0F01410 [Naumovozyma castellii CBS 4309]
Length = 379
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 17/156 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q GG + N +HL+G+++R +++ IKP +VFDG P L
Sbjct: 34 DASMSLYQFLIAVRQQDGGQLTNEAGETTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPTL 93
Query: 206 KKQTISTLEKDRDQL---------LLERGKQTRLASTITEQMSREAQELLQLFGVPFIVA 256
K +S R++ E+ KQ R ++++ + EA++LL+L G+P++ A
Sbjct: 94 KSHELSKRTSRREETEKKLAEAVDQAEKMKQERRLVKVSKEHNDEAKKLLELMGIPYVNA 153
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVY 292
PGEAE+QCA L ++D D + RT Y
Sbjct: 154 PGEAESQCAELAKKGKVYAAASEDMDTLCY--RTPY 187
>gi|409077739|gb|EKM78104.1| hypothetical protein AGABI1DRAFT_61094 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1128
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 204 QLKKQTISTLEKDRDQ----LLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGE 259
Q+K + ++ ++K+ D L +R R + IT+QM + +L+LFG+P+I AP E
Sbjct: 715 QVKGRNLNDVQKEIDDEIKILNDQRKAAMRDSEDITQQMISQIMTMLRLFGIPYITAPME 774
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHV 302
AEAQCA L GVITDDSD++LFGA+ VYKN F++ V
Sbjct: 775 AEAQCAELVSLGLVDGVITDDSDVFLFGAQRVYKNMFNQSKTV 817
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q D G + NAH++G RI KLLF+ IKPVFVFDGG P +K+ T+S
Sbjct: 30 DSSIWIYQFQATMRDKEGRGLVNAHVLGFLRRITKLLFYGIKPVFVFDGGAPVIKRATLS 89
Query: 212 TLEKDRDQLLLERGKQTRLAST-ITEQMSREA 242
+K + +L R+A + Q+ +EA
Sbjct: 90 ERKKKKSGAVL---SHARIAERLLAAQLRKEA 118
>gi|413946273|gb|AFW78922.1| flap endonuclease 1a [Zea mays]
Length = 523
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------LERG-- 225
+HL G+++R +LL IKPV+VFDG P +KKQ ++ RD +E G
Sbjct: 206 TSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDMKKQELAKRYSKRDDATKDLTEAVEVGDK 265
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K ++ +T Q + + + LL+L GVP + AP EAEA+CA+L + + V ++D
Sbjct: 266 DAIEKLSKRTVKVTRQHNEDCKRLLRLMGVPVVEAPSEAEAECAALCINDKVFAVASEDM 325
Query: 282 DIWLFGARTVYKNFFDKKS 300
D FGA ++ D S
Sbjct: 326 DSLTFGAPRFLRHLMDPSS 344
>gi|58390636|ref|XP_317855.2| AGAP011448-PA [Anopheles gambiae str. PEST]
gi|74802123|sp|Q7Q323.2|FEN1_ANOGA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|55237026|gb|EAA13029.2| AGAP011448-PA [Anopheles gambiae str. PEST]
Length = 383
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q +G + +HL+G ++R +LL IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRAEGAQLTSVDGETTSHLMGTFYRTIRLLENGIKPVYVFDGKPPDLK 93
Query: 207 KQTISTLEKDRDQLLLERGKQTRLAST------------ITEQMSREAQELLQLFGVPFI 254
++ + R++ K T +T +T+ + EA+ELL+L GVP++
Sbjct: 94 SGELNKRAERREEAQKALDKATEAGATEDIEKFNRRLVKVTKHHANEAKELLRLMGVPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
AP EAEAQCA+L T+D D FG+ + ++
Sbjct: 154 EAPCEAEAQCAALVRAGKVYATATEDMDALTFGSNILLRHL 194
>gi|339259208|ref|XP_003369790.1| putative DNA-repair protein [Trichinella spiralis]
gi|316966016|gb|EFV50652.1| putative DNA-repair protein [Trichinella spiralis]
Length = 859
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 57/96 (59%)
Query: 216 DRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQG 275
D +L E + A T+T Q+ E + L+LFGVP + + EAEAQCA LE ++G
Sbjct: 554 DFQKLESEHSRAEAGARTVTSQILDECEVFLRLFGVPIVKSLAEAEAQCAWLEQNQISEG 613
Query: 276 VITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
ITDDSDIWLFG + VY+N F KK V + I+
Sbjct: 614 TITDDSDIWLFGGQHVYRNLFVKKKLVQYFDMNTIK 649
>gi|167391034|ref|XP_001739610.1| Flap endonuclease 1-A [Entamoeba dispar SAW760]
gi|317374900|sp|B0EN90.1|FEN1_ENTDS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|165896655|gb|EDR24004.1| Flap endonuclease 1-A, putative [Entamoeba dispar SAW760]
Length = 376
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 21/180 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSV------PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D SI ++Q D G ++ +H+IG ++R KL+ IKPV+VFDG P++
Sbjct: 34 DASILVYQFISAVRDTTGATMVDEFGETTSHIIGTFYRTIKLIESGIKPVYVFDGKPPEM 93
Query: 206 KKQTIS----TLEKDRDQL--LLERG------KQTRLASTITEQMSREAQELLQLFGVPF 253
K ++ +K ++QL LE G K + + +T++ S E ++LLQL G+P
Sbjct: 94 KDGELNKRKENAQKAQEQLDKALEEGDKEQAKKLMKRTARMTKEQSDEVKKLLQLMGIPC 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFF---DKKSHVLRYTAPDI 310
+ A EAE CA+L T+D D G+ V + F +KK + Y+ I
Sbjct: 154 VEANCEAEGTCAALVKAGKCYATATEDMDALTLGSEYVVRKFSASDNKKEPIREYSLSSI 213
>gi|124505315|ref|XP_001351399.1| flap endonuclease 1 [Plasmodium falciparum 3D7]
gi|74876406|sp|Q7K734.1|FEN1_PLAF7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|11559508|gb|AAG37989.1|AF093702_1 flap endonuclease 1 [Plasmodium falciparum]
gi|6562723|emb|CAB62862.1| flap endonuclease 1 [Plasmodium falciparum 3D7]
Length = 672
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 20/176 (11%)
Query: 140 IVINKLLVDLIS-DVSIWLHQLTKGTHDLAG-GSVPN------AHLIGLYHRICKLLFFK 191
I I L+ +I+ D S+ L+Q D G++ N +H+ GL R +L+
Sbjct: 21 IKIESLMGRIIAIDASMSLYQFIIAIRDSEQYGNLTNESGETTSHISGLMSRSIRLMENG 80
Query: 192 IKPVFVFDGGVPQLKKQTIST-----------LEKDRDQLLLER-GKQTRLASTITEQMS 239
+KP++VFDG P+LK + L+K +++ LE KQ+ +T + +
Sbjct: 81 LKPIYVFDGAPPELKGSELEKRGEKRQKAEELLKKAKEEGNLEEIKKQSGRTVRVTRKQN 140
Query: 240 REAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
EA++LL L G+P I AP EAE+QCA L N T+D+D +FG + + +N
Sbjct: 141 EEAKKLLTLMGIPIIEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKILIRNL 196
>gi|317374937|sp|C5WU23.2|FEN12_SORBI RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
Length = 428
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 15/146 (10%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS--TLEKDRDQLLLERG------- 225
+HL G+ +R ++L IKPVFVFDG P++KK+ ++ +L++D L R
Sbjct: 90 SHLQGMLNRTVRMLEAGIKPVFVFDGEPPEMKKKELAKRSLKRDDATKDLNRAIEIGDED 149
Query: 226 ---KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
K ++ +T + + + + LL+L GVP + APGEAEAQCA+L + V ++D D
Sbjct: 150 AVEKFSKRTVKVTRKHNDDCKRLLRLMGVPVVEAPGEAEAQCAALCENHQVYAVASEDMD 209
Query: 283 IWLFGARTVYKNFFD---KKSHVLRY 305
FGAR ++ D KKS V +
Sbjct: 210 SLTFGARRFLRHLTDLGYKKSPVTEF 235
>gi|242032391|ref|XP_002463590.1| hypothetical protein SORBIDRAFT_01g002580 [Sorghum bicolor]
gi|241917444|gb|EER90588.1| hypothetical protein SORBIDRAFT_01g002580 [Sorghum bicolor]
Length = 477
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 15/146 (10%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS--TLEKDRDQLLLERG------- 225
+HL G+ +R ++L IKPVFVFDG P++KK+ ++ +L++D L R
Sbjct: 139 SHLQGMLNRTVRMLEAGIKPVFVFDGEPPEMKKKELAKRSLKRDDATKDLNRAIEIGDED 198
Query: 226 ---KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
K ++ +T + + + + LL+L GVP + APGEAEAQCA+L + V ++D D
Sbjct: 199 AVEKFSKRTVKVTRKHNDDCKRLLRLMGVPVVEAPGEAEAQCAALCENHQVYAVASEDMD 258
Query: 283 IWLFGARTVYKNFFD---KKSHVLRY 305
FGAR ++ D KKS V +
Sbjct: 259 SLTFGARRFLRHLTDLGYKKSPVTEF 284
>gi|336463192|gb|EGO51432.1| hypothetical protein NEUTE1DRAFT_70166 [Neurospora tetrasperma FGSC
2508]
gi|350297610|gb|EGZ78587.1| PIN domain-like protein [Neurospora tetrasperma FGSC 2509]
Length = 1269
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL++ IKPVFVFDGG P LK+
Sbjct: 27 LAIDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWYGIKPVFVFDGGAPALKRA 86
Query: 209 TI 210
TI
Sbjct: 87 TI 88
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 58/100 (58%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ E++ L ++ K R A +T+ M E Q LL+ FG+P+I AP EAEAQCA L
Sbjct: 856 AAYEQELKALRTQQRKDRRDADEVTQIMITECQALLRFFGIPYITAPMEAEAQCAELVRL 915
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G++TDDSD +LFG VYKN F+ V Y + DI
Sbjct: 916 GLVDGIVTDDSDTFLFGGTRVYKNMFNGNKFVECYLSSDI 955
>gi|449544360|gb|EMD35333.1| hypothetical protein CERSUDRAFT_66521 [Ceriporiopsis subvermispora
B]
Length = 320
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 149 LISDVSIWLHQLTKG-THDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK 207
L D +WLH+ T ++LA G N ++ HR+ L + I+P VFDGG KK
Sbjct: 27 LAVDAYVWLHRGTYSCAYELATGKRTNKYVDYAMHRVRLLRHYNIEPYIVFDGGPLPAKK 86
Query: 208 QTISTLEKDRDQ------LLLERGKQTRLAST------ITEQMSREAQELLQLFGVPFIV 255
T S + RD+ L +GK ++ +T QM+ + + L+ VP++V
Sbjct: 87 GTESERKARRDENIARANALAAQGKHSQAREYYVKCIDVTPQMAYQFIKALRAECVPYVV 146
Query: 256 APGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
AP EA+AQ A LE G+IT+DSD+ +FG +TV S V R + D
Sbjct: 147 APYEADAQLAYLERTGVVDGIITEDSDLLVFGCKTVLFKLDVAASTVTRVSRADF 201
>gi|85116383|ref|XP_965045.1| hypothetical protein NCU07498 [Neurospora crassa OR74A]
gi|28926846|gb|EAA35809.1| hypothetical protein NCU07498 [Neurospora crassa OR74A]
Length = 1269
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL++ IKPVFVFDGG P LK+
Sbjct: 27 LAIDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWYGIKPVFVFDGGAPALKRA 86
Query: 209 TI 210
TI
Sbjct: 87 TI 88
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 58/100 (58%)
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ E++ L ++ K R A +T+ M E Q LL+ FG+P+I AP EAEAQCA L
Sbjct: 853 AAYEQELKALRTQQRKDRRDADEVTQIMITECQALLRFFGIPYITAPMEAEAQCAELVRL 912
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G++TDDSD +LFG VYKN F+ V Y + DI
Sbjct: 913 GLVDGIVTDDSDTFLFGGTRVYKNMFNGNKFVECYLSSDI 952
>gi|195629924|gb|ACG36603.1| flap endonuclease 1a [Zea mays]
Length = 379
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------LERG-- 225
+HL G+++R +LL IKPV+VFDG P +KKQ ++ RD +E G
Sbjct: 62 TSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDMKKQELAKRYSKRDDATKDLTEAVEVGDK 121
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K ++ +T Q + + + LL+L GVP + AP EAEA+CA+L + + V ++D
Sbjct: 122 DAIEKLSKRTVKVTRQHNEDCKRLLRLMGVPVVEAPSEAEAECAALCINDKVFAVASEDM 181
Query: 282 DIWLFGARTVYKNFFDKKS 300
D FGA ++ D S
Sbjct: 182 DSLTFGAPRXLRHLMDPSS 200
>gi|332157650|ref|YP_004422929.1| flap endonuclease-1 [Pyrococcus sp. NA2]
gi|331033113|gb|AEC50925.1| flap endonuclease-1 [Pyrococcus sp. NA2]
Length = 342
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 139 NIVINKLLVDLISDVSIWLHQLTK--GTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVF 196
N+ K+ +D ++ + +L + + GT + +HL GL++R L+ IKPV+
Sbjct: 18 NLYGKKIAIDALNAIYQFLSTIRQRDGTPLMDSKGRMTSHLSGLFYRTINLMEAGIKPVY 77
Query: 197 VFDGGVPQLKKQTISTLEKDRDQL------LLERG------KQTRLASTITEQMSREAQE 244
VFDG P+ KK+ + + R++ L RG K + A+ + E + +A++
Sbjct: 78 VFDGKPPEFKKKELEKRREAREEAEVKWREALARGDIEEARKYAQRATKVNEMLIEDAKQ 137
Query: 245 LLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
LLQL G+P + AP E EAQ A + + + D D LFGA + +N
Sbjct: 138 LLQLMGIPIVQAPSEGEAQAAYMAMKGDVYASASQDYDSLLFGAPRLVRNL 188
>gi|37719664|gb|AAR01941.1| flap endonuclease 1 [Plasmodium falciparum]
Length = 648
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 20/176 (11%)
Query: 140 IVINKLLVDLIS-DVSIWLHQLTKGTHDLAG-GSVPN------AHLIGLYHRICKLLFFK 191
I I L+ +I+ D S+ L+Q D G++ N +H+ GL R +L+
Sbjct: 21 IKIESLMGRIIAIDASMSLYQFIIAIRDSEQYGNLTNESGETTSHISGLMSRSIRLMENG 80
Query: 192 IKPVFVFDGGVPQLKKQTIST-----------LEKDRDQLLLER-GKQTRLASTITEQMS 239
+KP++VFDG P+LK + L+K +++ LE KQ+ +T + +
Sbjct: 81 LKPIYVFDGAPPELKGSELEKRGEKRQKAEELLKKAKEEGNLEEIKKQSGRTVRVTRKQN 140
Query: 240 REAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
EA++LL L G+P I AP EAE+QCA L N T+D+D +FG + + +N
Sbjct: 141 EEAKKLLTLMGIPIIEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKILIRNL 196
>gi|159475218|ref|XP_001695720.1| nuclease, Rad2 family [Chlamydomonas reinhardtii]
gi|317374883|sp|A8J2Z9.1|FEN1_CHLRE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|158275731|gb|EDP01507.1| nuclease, Rad2 family [Chlamydomonas reinhardtii]
Length = 396
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS-----------TLEKDR---DQ 219
+HL G++ R K+L IKPV+VFDG PQLK+ ++ LEK + DQ
Sbjct: 62 TSHLQGMFFRTAKMLEAGIKPVYVFDGKPPQLKQDQLAQRTERRADANEALEKAKEAGDQ 121
Query: 220 LLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITD 279
+E K ++ + +T + + E + LL+L GVP + AP EAEAQCA + G+ T+
Sbjct: 122 EAIE--KYSKRSVRVTREHNDECKRLLRLMGVPVVEAPTEAEAQCAEMAKSGLVYGLATE 179
Query: 280 DSDIWLFGARTVYKNFFDKKSH 301
D D FGA V ++ S
Sbjct: 180 DMDALTFGAPRVIRHLMAPSSQ 201
>gi|74824687|sp|Q9GZ01.1|FEN1_PLAFA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|9885425|gb|AAG01445.1| flap endonuclease-1 [Plasmodium falciparum]
Length = 650
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 20/176 (11%)
Query: 140 IVINKLLVDLIS-DVSIWLHQLTKGTHDLAG-GSVPN------AHLIGLYHRICKLLFFK 191
I I L+ +I+ D S+ L+Q D G++ N +H+ GL R +L+
Sbjct: 21 IKIESLMGRIIAIDASMSLYQFIIAIRDSEQYGNLTNESGETTSHISGLMSRSIRLMENG 80
Query: 192 IKPVFVFDGGVPQLKKQTIST-----------LEKDRDQLLLER-GKQTRLASTITEQMS 239
+KP++VFDG P+LK + L+K +++ LE KQ+ +T + +
Sbjct: 81 LKPIYVFDGAPPELKGSELEKRGEKRQKAEELLKKAKEEGNLEEIKKQSGRTVRVTRKQN 140
Query: 240 REAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
EA++LL L G+P I AP EAE+QCA L N T+D+D +FG + + +N
Sbjct: 141 EEAKKLLTLMGIPIIEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKILIRNL 196
>gi|336265442|ref|XP_003347492.1| Rad2 protein [Sordaria macrospora k-hell]
gi|380087974|emb|CCC05192.1| putative Rad2 protein [Sordaria macrospora k-hell]
Length = 1279
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL++ IKPVFVFDGG P LK+
Sbjct: 27 LAIDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWYGIKPVFVFDGGAPALKRA 86
Query: 209 TI 210
TI
Sbjct: 87 TI 88
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 50/85 (58%)
Query: 226 KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWL 285
K R A +T+ M E Q LL+ FG+P+I AP EAEAQCA L G++TDDSD +L
Sbjct: 876 KDRRDADEVTQIMITECQALLRFFGIPYITAPMEAEAQCAELVRLGLVDGIVTDDSDTFL 935
Query: 286 FGARTVYKNFFDKKSHVLRYTAPDI 310
FG VYKN F+ V Y DI
Sbjct: 936 FGGTRVYKNMFNGNKFVECYLLNDI 960
>gi|395330939|gb|EJF63321.1| PIN domain-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 429
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G ++R +++ IKP +VFDG P+LK +S + R++ E K+T
Sbjct: 80 TSHLMGFFYRTIRMVENGIKPAYVFDGKPPELKSGVLSKRFEKREEAKEDGEEAKETGTA 139
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E ++LL L G+PF+VAP EAEAQCA L G ++D
Sbjct: 140 EDVDRFSRRTVKVTREHNEECRKLLTLMGIPFVVAPSEAEAQCAELARGGKVYAAGSEDM 199
Query: 282 DIWLFGA 288
D FGA
Sbjct: 200 DTLTFGA 206
>gi|256052789|ref|XP_002569934.1| xp-G/rad2 DNA repair endonuclease family member [Schistosoma
mansoni]
Length = 828
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 142 INKLLVDLIS-DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDG 200
++K+ D ++ D+SIW+ D + +P HL L+ R+ LL P+ V DG
Sbjct: 19 LSKIGCDSVAVDLSIWI------CGDKSITPLPALHLRNLFFRLVGLLRQNTLPIAVLDG 72
Query: 201 GVPQLKKQTISTLE-KDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGE 259
P LK + + K ++ ++ + L ++S+E +LL FG+P++ +PGE
Sbjct: 73 VAPSLKSDVMKQRQQKWTGKITTQKCTKPNLNRIRFSKVSQECIQLLNSFGIPWVQSPGE 132
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
AEA CA L IT+D D +L+GA TVY++F
Sbjct: 133 AEAMCAFLNSNKLVDACITNDGDAFLYGAETVYRHF 168
>gi|317374910|sp|B4FHY0.1|FEN1_MAIZE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194695278|gb|ACF81723.1| unknown [Zea mays]
Length = 379
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------LERG-- 225
+HL G+++R +LL IKPV+VFDG P +KKQ ++ RD +E G
Sbjct: 62 TSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDMKKQELAKRYSKRDDATKDLTEAVEVGDK 121
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K ++ +T Q + + + LL+L GVP + AP EAEA+CA+L + + V ++D
Sbjct: 122 DAIEKLSKRTVKVTRQHNEDCKRLLRLMGVPVVEAPSEAEAECAALCINDKVFAVASEDM 181
Query: 282 DIWLFGARTVYKNFFDKKS 300
D FGA ++ D S
Sbjct: 182 DSLTFGAPRFLRHLMDPSS 200
>gi|254573770|ref|XP_002493994.1| Single-stranded DNA endonuclease, cleaves single-stranded DNA
during nucleotide excision repair [Komagataella pastoris
GS115]
gi|238033793|emb|CAY71815.1| Single-stranded DNA endonuclease, cleaves single-stranded DNA
during nucleotide excision repair [Komagataella pastoris
GS115]
gi|328354189|emb|CCA40586.1| DNA repair protein complementing XP-G cells [Komagataella pastoris
CBS 7435]
Length = 1043
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G + ++H++G + RICKLLFF I+PVFVFDGG P LK++
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGRAFASSHIVGFFKRICKLLFFGIEPVFVFDGGAPILKRK 86
Query: 209 TIS 211
TI+
Sbjct: 87 TIA 89
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%)
Query: 226 KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWL 285
K R + +T+ M + Q++L FG+P+I AP EAEAQCA L G+ITDDSD +L
Sbjct: 755 KDQRDSDEVTQGMIDDIQDMLTRFGIPYITAPMEAEAQCAELLKLKLVDGIITDDSDCFL 814
Query: 286 FGARTVYKNFFDKKSHVLRYTAPDIR 311
FG +YKN F++K +V Y +I+
Sbjct: 815 FGGERIYKNMFNEKQYVECYFLEEIQ 840
>gi|343424970|emb|CBQ68507.1| related to RAD2-structure-specific nuclease of the nucleotide
excision repairosome [Sporisorium reilianum SRZ2]
Length = 1495
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
+E + + L E R IT+QM++E Q +L+LFG+P+I AP EAEAQCA L
Sbjct: 982 VESEVNALRTEFANSRRSEEDITKQMAQEIQMMLRLFGLPYITAPMEAEAQCAELVSRRL 1041
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHV 302
G+ITDDSD++LFG+ +YKN F+ V
Sbjct: 1042 VDGIITDDSDVFLFGSTRIYKNMFNNNKIV 1071
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 24/147 (16%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D S+WL+ D G ++ NAH++G RI KLLF ++PVFVFDGG P +K++
Sbjct: 27 LAIDSSLWLYHFQMAMRDKEGRTLSNAHILGFLWRILKLLFHGVRPVFVFDGGAPVMKRK 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELL--QLFGVPFI-VAPGEAEAQCA 265
T+S G++ R E +R A++LL Q+ VA G+A+ +
Sbjct: 87 TLS-------------GRKARRQGA-KESHARTAEKLLAAQMRQAAIKHVADGQAQPSSS 132
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVY 292
T G + D G TVY
Sbjct: 133 -------TAGQASTSEDAGSLGENTVY 152
>gi|389582194|dbj|GAB64749.1| flap exonuclease [Plasmodium cynomolgi strain B]
Length = 624
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 20/176 (11%)
Query: 140 IVINKLLVDLIS-DVSIWLHQLTKGTHDLAG-GSVPN------AHLIGLYHRICKLLFFK 191
I I L+ +++ D S+ L+Q D G++ N +H+ GL R KL+
Sbjct: 21 IKIENLMGRVVAIDASMSLYQFIIAIRDSEQYGNLTNESGETTSHISGLMSRSIKLMENG 80
Query: 192 IKPVFVFDGGVPQLKKQTIST-----------LEKDRDQLLLER-GKQTRLASTITEQMS 239
+KP++VFDG P+LK + L+K +++ LE KQ+ +T++ +
Sbjct: 81 LKPIYVFDGAPPELKGSELEKRGEKRQKAEELLKKAKEEGNLEEIKKQSGRTVRVTKKQN 140
Query: 240 REAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
EA++LL L G+P + AP EAE+QCA L N T+D+D +FG + + +N
Sbjct: 141 EEAKKLLTLMGIPVVEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKILIRNL 196
>gi|388858154|emb|CCF48222.1| related to RAD2-structure-specific nuclease of the nucleotide
excision repairosome [Ustilago hordei]
Length = 1592
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
+E + + L E R IT+QM++E Q +L+LFG+P+I AP EAEAQCA L
Sbjct: 1013 VESEVNALRAEFANSRRSEEDITKQMAQEIQMMLRLFGLPYITAPMEAEAQCAELVSRRL 1072
Query: 273 TQGVITDDSDIWLFGARTVYKNFFD 297
G+ITDDSD++LFG +YKN F+
Sbjct: 1073 VDGIITDDSDVFLFGGTRIYKNMFN 1097
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D S+WL+ D G ++ NAH++G RI KLLF ++PVFVFDGG P +K++
Sbjct: 27 LAIDSSLWLYHFQMAMRDREGRTLSNAHILGFLWRILKLLFHGVRPVFVFDGGAPVMKRK 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELL--QLFGVPFI-VAPGEAEAQCA 265
T+S G++ R E +R A++LL Q+ VA G+A A +
Sbjct: 87 TLS-------------GRKARKQGA-KESHARTAEKLLAAQMRQAAIKHVADGQARAPSS 132
Query: 266 SLELGNHTQ 274
+ G+ Q
Sbjct: 133 GAQQGSGAQ 141
>gi|340506781|gb|EGR32852.1| hypothetical protein IMG5_068750 [Ichthyophthirius multifiliis]
Length = 348
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 151 SDVSIWLHQLTKGTHDLAGGSVPN---------AHLIGLYHRICKLLFFKIKPVFVFDGG 201
D S+ ++Q T + + N AHL+GL++R L+ IKP ++FDG
Sbjct: 33 CDASMAMYQFLATTSSSSDFQIYNLTDKDGNKTAHLVGLFNRTVMLIDSGIKPAWIFDGK 92
Query: 202 VPQLK--------KQTISTLEKDRDQL----LLERGKQTRLASTITEQMSREAQELLQLF 249
P+ K K + LEK + L + E K + IT+ M +A ++LQL
Sbjct: 93 PPEFKSGELTKRQKAKANALEKQKAALDIGDMEEALKMEQRNLFITKDMKNDAIKMLQLL 152
Query: 250 GVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVL 303
GVP I AP EAEAQCA+L +T+D D FG T+ + KK ++
Sbjct: 153 GVPVIQAPCEAEAQCAALTKAKKVFATVTEDMDALTFGTPTLLRGLNSKKEPII 206
>gi|187608436|ref|NP_001120251.1| Gen endonuclease homolog 1 [Xenopus (Silurana) tropicalis]
gi|169641850|gb|AAI60467.1| LOC100145302 protein [Xenopus (Silurana) tropicalis]
Length = 219
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 11/168 (6%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIW+ + + G V HL L+ RI L +K VFV +G P++K +
Sbjct: 27 LAVDLSIWVCEAQMVKQMI--GVVHKPHLRNLFFRISSLNLLGVKLVFVSEGEAPKIKAE 84
Query: 209 TISTLEKDRDQLLL---ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCA 265
T+S R+++ + + + + +E +L+ G+P++ A GEAEA CA
Sbjct: 85 TMS----KRNEMRYGPSASAAPPKAGRSYFKSVLKECLLMLECLGIPWVQAAGEAEAMCA 140
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTAPDIR 311
L + G IT+D D++L+GA+T Y+NF K HV Y I+
Sbjct: 141 YLNAHGYVDGCITNDGDVFLYGAQTFYRNFTMNVKDPHVDCYEVSKIK 188
>gi|326919868|ref|XP_003206199.1| PREDICTED: flap endonuclease 1-like [Meleagris gallopavo]
Length = 381
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERGKQ 227
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R Q E G++
Sbjct: 61 TSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELARRTERRSEAEKHLQEAQEAGEE 120
Query: 228 TRLAS------TITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
T + +T+Q + E ++LL L G+P++ APGEAEA CA+L T+D
Sbjct: 121 TNIEKFSKRLVKVTQQHTDECKKLLMLMGIPYVEAPGEAEASCATLVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|403222552|dbj|BAM40684.1| 5'-3' exonuclease [Theileria orientalis strain Shintoku]
Length = 824
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 152 DVSIWLHQLTKGTHDLAG-GSVPNA------HLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S L+Q T D + S+ NA HL G+ R KLL IKPVFVFD P+
Sbjct: 34 DASTALYQFTIAIRDSSYFSSLVNASGESTSHLYGMMSRCSKLLECGIKPVFVFDSKPPE 93
Query: 205 LKKQTISTLEKDRD-------QLLLERGKQT--RLAS---TITEQMSREAQELLQLFGVP 252
LK +T+ + R+ Q + E K++ +L +T++M+ A++LL+L GVP
Sbjct: 94 LKLKTLEKRRQRREEASTSLKQAIAEGDKESIKKLMGRTVKVTKEMNDSAKKLLRLMGVP 153
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKN 294
I AP EAEAQCA L + + V ++D+D FG + +N
Sbjct: 154 VIEAPEEAEAQCAYLVRNSLCRFVASEDTDTLAFGGGYLLRN 195
>gi|110766831|ref|XP_395769.3| PREDICTED: flap endonuclease 1 [Apis mellifera]
Length = 379
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G + +HL+G+++R +L+ IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLTSVDGETTSHLMGMFYRTIRLVEQGIKPVYVFDGKPPNLK 93
Query: 207 KQTISTLEKDRD--QLLLERGKQT----------RLASTITEQMSREAQELLQLFGVPFI 254
++ + RD Q LL+ ++ R +T++ + EA++LL+L G+P+I
Sbjct: 94 GGELAKRAEKRDEAQKLLQAAEEAGNAEDIEKFNRRLVKVTKEHADEAKQLLKLMGIPYI 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
AP EAEAQCA++ T+D D FG + +
Sbjct: 154 DAPCEAEAQCAAMVKAGKVFATATEDMDALTFGCNILLRRL 194
>gi|402083876|gb|EJT78894.1| DNA-repair protein rad13 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1287
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 60/97 (61%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E++ QL ++ + R A +++ M E Q+LL+LFG+P+I AP EAEAQCA L
Sbjct: 869 EQELRQLRAQQKRDLRDADEVSQVMVAECQQLLRLFGIPYITAPMEAEAQCAELVQLGLV 928
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
G++TDDSD +LFG VYKN F+ V Y + D+
Sbjct: 929 DGIVTDDSDTFLFGGTRVYKNMFNGNKFVECYLSSDL 965
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ ++H++G + RICKLL+F I+PVFVFDGG P LK+
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRSSHVVGFFRRICKLLWFGIQPVFVFDGGAPILKRA 86
Query: 209 TIST 212
T+ +
Sbjct: 87 TLQS 90
>gi|443897481|dbj|GAC74821.1| 5'-3' exonuclease [Pseudozyma antarctica T-34]
Length = 1544
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%)
Query: 213 LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
+E + + L E R IT+QM++E Q +L+LFG+P+I AP EAEAQCA L
Sbjct: 1031 VESEVNALRAEFANSRRSEEDITKQMAQEIQMMLRLFGLPYITAPMEAEAQCAELVSRRL 1090
Query: 273 TQGVITDDSDIWLFGARTVYKNFFD 297
G+ITDDSD++LFG +YKN F+
Sbjct: 1091 VDGIITDDSDVFLFGGTRIYKNMFN 1115
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D S+WL+ D G ++ NAH++G RI KLLF ++PVFVFDGG P +K++
Sbjct: 27 LAIDSSLWLYHFQMAMRDKEGRTLSNAHILGFLWRILKLLFHGVRPVFVFDGGAPVMKRK 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREA--QELLQLFGVPFIVAPG---EAEAQ 263
T+S K R Q E R A + R+A + + + G P + A+A
Sbjct: 87 TLSG-RKARKQGAKE--SHARTAEKLLNAQMRQAAIKHVAEAGGAPPRASSSTDNNADAS 143
Query: 264 CASLELGNHT 273
+ LG +T
Sbjct: 144 AGASGLGENT 153
>gi|449543076|gb|EMD34053.1| hypothetical protein CERSUDRAFT_107818 [Ceriporiopsis subvermispora
B]
Length = 1202
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 204 QLKKQTISTLEKDRDQLLLERGKQTRLA----STITEQMSREAQELLQLFGVPFIVAPGE 259
Q+K + I ++++ D+ + +Q + A +T+QM + +L+LFG+P+I AP E
Sbjct: 778 QVKGKDIEAVQREIDEEIRALNQQKKAAMRDSEDVTQQMVSQIMVMLRLFGIPYITAPME 837
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
AEAQCA L G+ITDDSD++LFG + V KN F++ V Y PD+
Sbjct: 838 AEAQCAELLTLGLVDGIITDDSDVFLFGGQRVLKNMFNQSKTVECYLLPDL 888
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q D G + NAH++G RI KLLF+ IKPVFVFDGG P LK+ TI+
Sbjct: 30 DSSIWIYQFQATMRDKEGRGLVNAHVLGFLRRISKLLFYGIKPVFVFDGGAPALKRSTIA 89
Query: 212 TLEKDRDQLLLERGK-QTRLASTITEQMSREA 242
+ + K RL + QM REA
Sbjct: 90 ERKSKKSGAAASHAKVAERL---LAAQMRREA 118
>gi|29467052|dbj|BAC66965.1| flap endonuclease-1b [Oryza sativa Japonica Group]
gi|37496995|dbj|BAC98428.1| flap endonuclease-1b [Oryza sativa Japonica Group]
Length = 412
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 23/176 (13%)
Query: 152 DVSIWLHQL-----TKGTHDLA--GGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S+ ++Q KGT L G V +HL G+ +R ++L IKPVFVFDG P
Sbjct: 34 DASLSIYQFLIVVGRKGTEVLTNEAGEV-TSHLQGMLNRTVRILEAGIKPVFVFDGEPPD 92
Query: 205 LKKQTIS--TLEKDRDQLLLERG----------KQTRLASTITEQMSREAQELLQLFGVP 252
+KK+ ++ +L++D L R K ++ +T++ + + + LL L GVP
Sbjct: 93 MKKKELAKRSLKRDGSSEDLNRAIEVGDEDLIEKFSKRTVKVTKKHNEDCKRLLSLMGVP 152
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFD---KKSHVLRY 305
+ APGEAEAQCA+L + + ++D D FGAR ++ D K+S V +
Sbjct: 153 VVQAPGEAEAQCAALCENHKVFAIASEDMDSLTFGARRFLRHLTDLSFKRSPVTEF 208
>gi|115456427|ref|NP_001051814.1| Os03g0834000 [Oryza sativa Japonica Group]
gi|62510683|sp|Q75LI2.1|FEN12_ORYSJ RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B; AltName:
Full=OsFEN-1b
gi|317374867|sp|B8AMS4.1|FEN12_ORYSI RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
gi|40714676|gb|AAR88582.1| flap endonuclease-1b [Oryza sativa Japonica Group]
gi|108711942|gb|ABF99737.1| Flap endonuclease-1b, putative, expressed [Oryza sativa Japonica
Group]
gi|113550285|dbj|BAF13728.1| Os03g0834000 [Oryza sativa Japonica Group]
gi|215692762|dbj|BAG88230.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194043|gb|EEC76470.1| hypothetical protein OsI_14202 [Oryza sativa Indica Group]
gi|222626117|gb|EEE60249.1| hypothetical protein OsJ_13256 [Oryza sativa Japonica Group]
Length = 412
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 23/176 (13%)
Query: 152 DVSIWLHQL-----TKGTHDLA--GGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S+ ++Q KGT L G V +HL G+ +R ++L IKPVFVFDG P
Sbjct: 34 DTSLSIYQFLIVVGRKGTEVLTNEAGEV-TSHLQGMLNRTVRILEAGIKPVFVFDGEPPD 92
Query: 205 LKKQTIS--TLEKDRDQLLLERG----------KQTRLASTITEQMSREAQELLQLFGVP 252
+KK+ ++ +L++D L R K ++ +T++ + + + LL L GVP
Sbjct: 93 MKKKELAKRSLKRDGSSEDLNRAIEVGDEDLIEKFSKRTVKVTKKHNEDCKRLLSLMGVP 152
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFD---KKSHVLRY 305
+ APGEAEAQCA+L + + ++D D FGAR ++ D K+S V +
Sbjct: 153 VVQAPGEAEAQCAALCENHKVFAIASEDMDSLTFGARRFLRHLTDLSFKRSPVTEF 208
>gi|391334775|ref|XP_003741776.1| PREDICTED: flap endonuclease 1-like [Metaseiulus occidentalis]
Length = 379
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 12/132 (9%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAS-- 232
+HL+G ++R +++ IKP++VFDG P +K + + R++ E K T + +
Sbjct: 62 SHLVGFFYRTIRMIENGIKPLYVFDGKPPDMKSGELEKRAERREEAQKELDKATEVGNQE 121
Query: 233 ----------TITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
+++Q + +AQ LL L GVPF+VAP EAEAQCA L T+D D
Sbjct: 122 DINKFQRRLVKVSKQHNADAQRLLALMGVPFLVAPCEAEAQCAELVKAQKVYAAATEDMD 181
Query: 283 IWLFGARTVYKN 294
FGA + ++
Sbjct: 182 CLTFGASVLLRH 193
>gi|383854420|ref|XP_003702719.1| PREDICTED: flap endonuclease GEN-like [Megachile rotundata]
Length = 717
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S W+ T + A P +L LY R LL +I+PVFV +G P LK I+
Sbjct: 30 DISGWVVDSQTVTDNHAQ---PKMYLRNLYFRTAFLLMHEIQPVFVLEGKAPDLKHNAIA 86
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
R+ ER + ++ +E +ELL G+ I GEAEA CA L
Sbjct: 87 KRNNIRNGFR-ERKTAGKGRRPQLNRILKECKELLGYMGLACIQGQGEAEAMCAHLNEDG 145
Query: 272 HTQGVITDDSDIWLFGARTVYKNF 295
G I+ DSD +L+GA+ VY+NF
Sbjct: 146 LVHGCISQDSDCFLYGAKVVYRNF 169
>gi|242080167|ref|XP_002444852.1| hypothetical protein SORBIDRAFT_07g000270 [Sorghum bicolor]
gi|241941202|gb|EES14347.1| hypothetical protein SORBIDRAFT_07g000270 [Sorghum bicolor]
Length = 698
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 82/173 (47%), Gaps = 19/173 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI- 210
D+S WL Q A +L L+HRI LL +FV DG +P +K T
Sbjct: 30 DLSCWLVQFCSANRSPAF-LRDKVYLKNLFHRIRALLALNCSLIFVSDGAIPSVKLATYR 88
Query: 211 ---------STLEKDRDQLL--LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGE 259
+T E+ Q L L R K + + +M +EA+ L G+P + E
Sbjct: 89 RRLGLNAAEATREEANSQPLTSLRRNKSSEFS-----RMIKEAKHLGLALGIPCLDGVEE 143
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKN-FFDKKSHVLRYTAPDIR 311
AEAQCA L + G T DSD +LFGARTVY++ F + +V+ Y DI+
Sbjct: 144 AEAQCAMLNFASLCDGCFTSDSDSFLFGARTVYRDVFIGEGGYVICYEMEDIQ 196
>gi|302753842|ref|XP_002960345.1| hypothetical protein SELMODRAFT_73710 [Selaginella moellendorffii]
gi|302767900|ref|XP_002967370.1| hypothetical protein SELMODRAFT_86726 [Selaginella moellendorffii]
gi|300165361|gb|EFJ31969.1| hypothetical protein SELMODRAFT_86726 [Selaginella moellendorffii]
gi|300171284|gb|EFJ37884.1| hypothetical protein SELMODRAFT_73710 [Selaginella moellendorffii]
Length = 116
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW+ Q K D G + NAHL+G + RICKLLF ++KPVFVFDGG P LK++
Sbjct: 27 LAIDASIWIIQFLKAMRDDRGEVMRNAHLLGFFRRICKLLFLRVKPVFVFDGGTPFLKRR 86
Query: 209 TISTLEKDRDQ 219
T+ + R+Q
Sbjct: 87 TVIARRRQREQ 97
>gi|332021297|gb|EGI61676.1| Flap endonuclease 1-B [Acromyrmex echinatior]
Length = 381
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G +HL+G ++R +++ IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLTTVDGETTSHLMGTFYRTIRMVEQGIKPVYVFDGKPPNLK 93
Query: 207 KQTISTLEKDRD--QLLLERGKQ----------TRLASTITEQMSREAQELLQLFGVPFI 254
++ + RD Q LL+ ++ R +T+ + EA+ELLQL G+P++
Sbjct: 94 SGELTKRAERRDEAQKLLQAAEEDGNVEAIDKFNRRLVKVTKTHADEAKELLQLMGIPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
AP EAEAQCA+L T+D D FG + +
Sbjct: 154 DAPCEAEAQCAALVKAGKVFATATEDMDALTFGCNVLLRRL 194
>gi|358341292|dbj|GAA49005.1| DNA excision repair protein ERCC-5 [Clonorchis sinensis]
Length = 1013
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 216 DRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQG 275
D D L + + TR A T T++ EAQ LLQLFG+PFIV+P EAEAQC +L+
Sbjct: 583 DDDVLRDQADRLTRQAQTTTQRCVEEAQNLLQLFGMPFIVSPEEAEAQCVALQQSGLVDL 642
Query: 276 VITDDSDIWLFGARTVYKNFF-----DKKSHVLR 304
V +DDSD+W FGAR V ++ F D K V R
Sbjct: 643 VASDDSDVWPFGARLVCRHLFAGGAVDTKPKVTR 676
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D++IWLHQ K G P A+L L+ R+CKL++F I+PVFVFDG VP LKK T++
Sbjct: 30 DMNIWLHQAVKSRASTGG---PKAYLTVLFRRLCKLIYFGIRPVFVFDGDVPALKKATMA 86
Query: 212 TLEKDRDQLLLERGKQTR 229
+ R L +R + R
Sbjct: 87 VRRRLRHN-LADRANEAR 103
>gi|356927843|gb|AET42633.1| flap endonuclease-1 [Emiliania huxleyi virus 202]
Length = 358
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 16/151 (10%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK-----------QTISTLEKDRDQLLL 222
+HL GL++R +L+ IKPV+VFDG PQLK+ Q +S L+ D +
Sbjct: 62 TSHLTGLFYRTIRLIEAGIKPVYVFDGKPPQLKQKELDKRNERQAQALSELKVTDDSYEI 121
Query: 223 ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
E KQ + + T + S E ++LL G+P + AP EAEA CA+ T+D D
Sbjct: 122 E--KQEKRSVRATREQSEEVKKLLTFMGIPVVQAPCEAEATCAAYVKAGKAYATATEDMD 179
Query: 283 IWLFGARTVYKNFFD---KKSHVLRYTAPDI 310
FG+ V ++ KK + Y+ P+I
Sbjct: 180 SLTFGSTHVIRHINSTDQKKQPTVEYSLPNI 210
>gi|67470614|ref|XP_651270.1| FEN-1 nuclease [Entamoeba histolytica HM-1:IMSS]
gi|317374901|sp|C4M6G8.1|FEN1_ENTHI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|56467989|gb|EAL45884.1| FEN-1 nuclease, putative [Entamoeba histolytica HM-1:IMSS]
gi|449710440|gb|EMD49517.1| Flap endonuclease, putative [Entamoeba histolytica KU27]
Length = 376
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 21/180 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSV------PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D SI ++Q D G ++ +H+IG ++R KL+ IKP++VFDG P++
Sbjct: 34 DASILVYQFISAVRDTTGATMVDEFGETTSHIIGTFYRTIKLIESGIKPIYVFDGKPPEM 93
Query: 206 KKQTI----STLEKDRDQL--LLERG------KQTRLASTITEQMSREAQELLQLFGVPF 253
K + +K ++QL LE G K + + +T++ S E ++LLQL G+P
Sbjct: 94 KDGELHKRKENAQKAQEQLDKALEEGDKEQAKKLMKRTARMTKEQSDEVKKLLQLMGIPC 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFF---DKKSHVLRYTAPDI 310
I A EAE CA+L T+D D G+ V + F +KK + Y+ I
Sbjct: 154 IEANCEAEGTCAALVKAGKCYATATEDMDALTLGSEHVVRKFSANDNKKDPIREYSLSSI 213
>gi|221052642|ref|XP_002261044.1| flap exonuclease [Plasmodium knowlesi strain H]
gi|317376188|sp|B3L014.1|FEN1_PLAKH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194247048|emb|CAQ38232.1| flap exonuclease, putative [Plasmodium knowlesi strain H]
Length = 595
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 20/176 (11%)
Query: 140 IVINKLLVDLIS-DVSIWLHQLTKGTHDLAG-GSVPN------AHLIGLYHRICKLLFFK 191
I I L+ +++ D S+ L+Q D G++ N +H+ GL R KL+
Sbjct: 21 IKIENLMGRVVAIDASMSLYQFIIAIRDSEQYGNLTNESGETTSHISGLMSRSIKLMENG 80
Query: 192 IKPVFVFDGGVPQLKKQTIST-----------LEKDRDQLLLER-GKQTRLASTITEQMS 239
+KP++VFDG P+LK + L+K +++ LE KQ+ +T++ +
Sbjct: 81 LKPIYVFDGAPPELKGSELEKRGEKRQKAEELLKKAKEEGNLEEIKKQSGRTVRVTKKQN 140
Query: 240 REAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
EA++LL L G+P + AP EAE+QCA L N T+D+D +FG + + +N
Sbjct: 141 EEAKKLLTLMGIPVVEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKILIRNL 196
>gi|357139431|ref|XP_003571285.1| PREDICTED: flap endonuclease GEN-like 2-like [Brachypodium
distachyon]
Length = 706
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 80/171 (46%), Gaps = 18/171 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI- 210
D+S WL Q A +L L+HRI LL +FV DG +P +K T
Sbjct: 30 DLSCWLVQFCSANRSPAFVK-DKVYLKNLFHRIRALLALNCSLIFVTDGAIPSVKLATYR 88
Query: 211 ----STLEKDRDQL------LLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEA 260
S E D+ L R K + + +M +EA+ L G+P + E
Sbjct: 89 RRLGSNSEATHDETNPQPLTSLRRNKGSEFS-----RMIKEAKNLGLALGIPCLDGVEEG 143
Query: 261 EAQCASLELGNHTQGVITDDSDIWLFGARTVYKN-FFDKKSHVLRYTAPDI 310
EAQCA L L + +G T DSD +LFGARTVY++ F + +V+ Y DI
Sbjct: 144 EAQCALLNLTSLCEGCFTSDSDAFLFGARTVYRDVFIGEGGYVICYEMEDI 194
>gi|374327648|ref|YP_005085848.1| flap endonuclease-1 [Pyrobaculum sp. 1860]
gi|356642917|gb|AET33596.1| flap endonuclease-1 [Pyrobaculum sp. 1860]
Length = 346
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------LERGKQ 227
+HL GL++R LL IKPV+VFDG P+ K I + K R++ + L+ G++
Sbjct: 59 TSHLSGLFYRTINLLESGIKPVYVFDGKPPEFKLAEIESRRKTREKAMEEVVKALKEGRK 118
Query: 228 ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
+ A IT +M E+++LL GVP++ AP E EAQ A + + H V + D
Sbjct: 119 EDVIKYAKRAVFITSEMVEESRKLLSYMGVPWVQAPSEGEAQAAYMVVKGHCWAVGSQDY 178
Query: 282 DIWLFGARTVYKNF 295
D LFG+ + +N
Sbjct: 179 DALLFGSPRLVRNL 192
>gi|307214986|gb|EFN89831.1| Flap endonuclease 1-B [Harpegnathos saltator]
Length = 380
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 17/161 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G +HL+G+++R +L+ IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLTTVDGETTSHLMGIFYRTIRLVEQGIKPVYVFDGKPPNLK 93
Query: 207 KQTISTLEKDRD--QLLLERGKQ----------TRLASTITEQMSREAQELLQLFGVPFI 254
++ + RD Q LL+ ++ R +T+ + EA++LL+L G+P+I
Sbjct: 94 GGELAKRAERRDEAQKLLQAAEEDGDAEAIDKFNRRLVKVTKTHAEEAKQLLKLMGIPYI 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
AP EAEAQCA+L T+D D FG + +
Sbjct: 154 DAPCEAEAQCAALVKAGKVFATATEDMDALTFGCNVLLRRL 194
>gi|209879882|ref|XP_002141381.1| Flap endonuclease 1 [Cryptosporidium muris RN66]
gi|317374886|sp|B6AFP1.1|FEN1_CRYMR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|209556987|gb|EEA07032.1| Flap endonuclease 1, putative [Cryptosporidium muris RN66]
Length = 472
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 22/180 (12%)
Query: 142 INKLLVDLIS-DVSIWLHQLTKGTHDLAG-GSVPN------AHLIGLYHRICKLLFFKIK 193
I+ L+ +I+ D S+W++Q + + G++ N +H+ G+ R +LL IK
Sbjct: 23 IDSLIGRIIAIDASMWMYQFLAAIREGSQWGNLTNEAGESTSHISGMLSRTIRLLEAGIK 82
Query: 194 PVFVFDGGVPQLKKQTISTLEKDRD--QLLLERGKQTRLASTITEQMSR----------E 241
PVFVFDG P+LK + + ++ R+ Q LE+ ++ TI +Q+ R +
Sbjct: 83 PVFVFDGEPPELKMEELMKRKERREKAQQELEKAQEEGDTETIRKQLIRTIKITKEQSDD 142
Query: 242 AQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYK--NFFDKK 299
+ +L+L G+P I A EAEAQCA L GV T+D+D FG V + NF D K
Sbjct: 143 VKYMLKLLGIPVIEATSEAEAQCAELCKEGLVYGVATEDADSLTFGTPLVIRHLNFSDGK 202
>gi|265141450|gb|ACY74444.1| flap endonuclease [Carukia barnesi]
Length = 236
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 75/134 (55%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS--TLEKDRDQLLLERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P++K ++ T ++ Q LE ++T
Sbjct: 61 TSHLMGIFYRTIRMVENGIKPLYVFDGKPPEMKSGELTKRTERREEAQKQLEVAQETGDT 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T+Q + E ++LL+L G+P+I AP EAEAQCA L G T+D
Sbjct: 121 ENIEKFSRRLVKVTQQHNNECKQLLKLMGIPYIEAPCEAEAQCAELVKGGKVFAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSNVMLRHL 194
>gi|380015033|ref|XP_003691516.1| PREDICTED: flap endonuclease 1-like [Apis florea]
Length = 383
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G + +HL+G+++R +L+ IKPV++FDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLTSVDGETTSHLMGMFYRTIRLVEQGIKPVYIFDGKPPNLK 93
Query: 207 KQTISTLEKDRD--QLLLERGKQT----------RLASTITEQMSREAQELLQLFGVPFI 254
++ + RD Q LL+ ++ R +T++ + EA++LL+L G+P+I
Sbjct: 94 GGELAKRAEKRDEAQKLLQAAEEAGNAEDIEKFNRRLVKVTKEHAEEAKQLLKLMGIPYI 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
AP EAEAQCA++ T+D D FG + +
Sbjct: 154 DAPCEAEAQCAAMVKAGKVFATATEDMDALTFGCNILLRRL 194
>gi|67610024|ref|XP_667077.1| flap endonuclease 1 [Cryptosporidium hominis TU502]
gi|54658174|gb|EAL36849.1| flap endonuclease 1 [Cryptosporidium hominis]
Length = 454
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 20/174 (11%)
Query: 155 IWLHQLTKGTHDLAG-GSVPNA------HLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK 207
+W++Q + + G++ N+ H+ G+ R +LL IKPVFVFDG P++KK
Sbjct: 1 MWIYQFLAAIREGSQWGNLTNSSGESTSHINGMLSRTTRLLEAGIKPVFVFDGAPPEMKK 60
Query: 208 QTISTLEKDRDQLL--LERG----------KQTRLASTITEQMSREAQELLQLFGVPFIV 255
++ ++ R++ L LE+ KQ+ +T++ + ++LL G+P I
Sbjct: 61 DELTKRDERREKALAELEKAQEVGDEELIKKQSVRTIHVTKKQVEDVKKLLGFLGMPCID 120
Query: 256 APGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF-FDKKSHVLRYTAP 308
AP EAEAQCA L GV+T+D+D FG K F + S+ + +P
Sbjct: 121 APSEAEAQCAELCKDGLVYGVVTEDADSLTFGTPIQIKQLNFSESSNKISDKSP 174
>gi|358340619|dbj|GAA29362.2| flap endonuclease GEN homolog 1 [Clonorchis sinensis]
Length = 612
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+SIW H+++ + +L L+ R LL PV V DG P LK TI+
Sbjct: 30 DLSIWTCGDVSVKHNMSVST--KLYLRNLFFRTLNLLRQNTLPVVVLDGVAPSLKATTIA 87
Query: 212 T-LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
L R + L + ++S E + LLQ GVP + +PGEAEA CA L
Sbjct: 88 NRLCTQRRNIELSIDPAVLVKRRRLSKISGECRTLLQALGVPCVQSPGEAEAMCALLNSS 147
Query: 271 NHTQGVITDDSDIWLFGARTVYKNF 295
IT+D D +L+GA TVY++F
Sbjct: 148 KRVDACITNDGDAFLYGATTVYRHF 172
>gi|71019629|ref|XP_760045.1| hypothetical protein UM03898.1 [Ustilago maydis 521]
gi|46099838|gb|EAK85071.1| hypothetical protein UM03898.1 [Ustilago maydis 521]
Length = 1532
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 52/83 (62%)
Query: 220 LLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITD 279
L E R IT+QM++E Q +L+LFG+P+I AP EAEAQCA L G+ITD
Sbjct: 1016 LRAEFANSRRSEEDITKQMAQEIQMMLRLFGLPYITAPMEAEAQCAELVSRRLVDGIITD 1075
Query: 280 DSDIWLFGARTVYKNFFDKKSHV 302
DSD++LFG VYKN F+ V
Sbjct: 1076 DSDVFLFGGTRVYKNMFNNNKIV 1098
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D S+WL+ D G ++ NAH++G RI KLLF ++PVFVFDGG P +K++
Sbjct: 27 LAIDSSLWLYHFQMAMRDKDGRTLSNAHILGFLWRILKLLFHGVRPVFVFDGGAPAMKRK 86
Query: 209 TIS 211
T+S
Sbjct: 87 TLS 89
>gi|326429821|gb|EGD75391.1| flap endonuclease-1 [Salpingoeca sp. ATCC 50818]
Length = 380
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ ++Q ++G++ +HL G+++R +++ +KPV+VFDG P LK
Sbjct: 34 DASMSIYQFLIAVRSEGSNLTNAEGETTSHLSGIFYRTIRMVNNGVKPVYVFDGKPPTLK 93
Query: 207 KQTISTLEKDRDQL------LLERGKQ------TRLASTITEQMSREAQELLQLFGVPFI 254
++ + R + E G Q TR +T + +R+ QELL L G+P+I
Sbjct: 94 SGELAKRTERRKEAQSKLEAATEEGVQADMEKFTRRLVKVTPEHNRQCQELLDLMGIPYI 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
VAP EAEAQCA L T+D D FG + ++
Sbjct: 154 VAPCEAEAQCAELVKAGKVFATATEDMDALTFGTSVLLRHM 194
>gi|70942151|ref|XP_741275.1| flap exonuclease [Plasmodium chabaudi chabaudi]
gi|74978262|sp|Q4XXP8.1|FEN1_PLACH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|56519555|emb|CAH78313.1| flap exonuclease, putative [Plasmodium chabaudi chabaudi]
Length = 479
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 19/163 (11%)
Query: 152 DVSIWLHQLTKGTHD-------LAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S+ L+Q D + +H+ GL R KL+ +KP++VFDG P+
Sbjct: 34 DASMSLYQFIIAIRDGDQYGNLMNEAGETTSHISGLMSRTIKLMENGLKPIYVFDGAPPE 93
Query: 205 LKKQTISTLEKDR---DQLLL---ERG------KQTRLASTITEQMSREAQELLQLFGVP 252
LK + + R ++LLL E G KQ+ +T++ + EA++LL L G+P
Sbjct: 94 LKGSELEKRGEKRQKAEELLLKAKEEGNLEEIKKQSGRTVRVTKKQNEEAKKLLTLMGIP 153
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
I +P EAEAQCA L + T+D+D +FG + + +N
Sbjct: 154 VIESPCEAEAQCAFLTKYDMAHATATEDADALVFGTKILIRNL 196
>gi|300120755|emb|CBK20997.2| unnamed protein product [Blastocystis hominis]
Length = 548
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 52/77 (67%)
Query: 234 ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYK 293
++E + + E+L +FG+P++ APGEAEAQCA L+L GVI++DSD++ FG +T+Y+
Sbjct: 440 VSENIIMDIVEILHIFGIPYVFAPGEAEAQCAFLDLMELVDGVISNDSDVFAFGGKTMYR 499
Query: 294 NFFDKKSHVLRYTAPDI 310
NFF V Y DI
Sbjct: 500 NFFVDNRFVEVYKIEDI 516
>gi|346976080|gb|EGY19532.1| DNA-repair protein rad2 [Verticillium dahliae VdLs.17]
Length = 394
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTL--EKDRDQLLLERGKQTRLA 231
+HL+G+++R +++ IKP++VFDG P+LK ++ K + LE K+T A
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEAKEGLEEAKETGTA 120
Query: 232 STI----------TEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
I T + + E Q+LL+L GVPFI+AP EAEAQCA L G ++D
Sbjct: 121 EDIEKFSRRTVRVTREHNAECQKLLKLMGVPFIIAPTEAEAQCAVLAKGGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLTF 185
>gi|221053197|ref|XP_002257973.1| DNA repair endonuclease [Plasmodium knowlesi strain H]
gi|193807805|emb|CAQ38510.1| DNA repair endonuclease, putative [Plasmodium knowlesi strain H]
Length = 1431
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 59/91 (64%)
Query: 215 KDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQ 274
K+ ++L+ E K + I E+M+ + + LL +FG+P++ +P EAEAQC+ L N+
Sbjct: 1080 KENEELVKEYRKLKKNNIEINEEMNEDIKILLNMFGIPYVQSPCEAEAQCSYLNCKNYCD 1139
Query: 275 GVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+I+DDSD+ +F +TV KNFF+KK V Y
Sbjct: 1140 AIISDDSDVLVFNGKTVIKNFFNKKKTVEVY 1170
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 28/87 (32%)
Query: 152 DVSIWLHQLTKGTH--DLAGGSVPN--------------------------AHLIGLYHR 183
DVSIWL++LT + L G V N HL + R
Sbjct: 30 DVSIWLYELTYANNMKVLRNGGVDNMSMFNDLWMDFSENMNTDMRTENLRKVHLYFFFLR 89
Query: 184 ICKLLFFKIKPVFVFDGGVPQLKKQTI 210
ICKLL++ I+P+F+FDG P+LK++TI
Sbjct: 90 ICKLLYYNIRPIFIFDGTPPELKRKTI 116
>gi|50551183|ref|XP_503065.1| YALI0D20240p [Yarrowia lipolytica]
gi|49648933|emb|CAG81257.1| YALI0D20240p [Yarrowia lipolytica CLIB122]
Length = 1115
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 223 ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
++ + T IT+ M E Q+LLQLFG+PFI AP EAEAQCA+L + GVIT+DSD
Sbjct: 804 QKSRDTTNEEAITQTMVDECQQLLQLFGIPFITAPTEAEAQCATLVNLDLVDGVITEDSD 863
Query: 283 IWLFGAR---TVYKNFFDKKSHVLRYTAPDI 310
++LF + V+KNFF+ +V Y +I
Sbjct: 864 VFLFSSNPRMRVFKNFFNSNKYVECYKTGEI 894
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K T G NAHL+G + RI KLLF IKPVFVFDG P+LK++
Sbjct: 27 LAVDASIWIYQFLKTTR---GAGKKNAHLVGFFRRILKLLFLGIKPVFVFDGVAPELKRK 83
Query: 209 TIS 211
T++
Sbjct: 84 TVA 86
>gi|336383337|gb|EGO24486.1| hypothetical protein SERLADRAFT_467878 [Serpula lacrymans var.
lacrymans S7.9]
Length = 151
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q D G ++ NAH++G RICKLLF+ I+PVFVFDGG P LK+
Sbjct: 27 LAIDSSIWIYQFQATMRDKDGRALVNAHVLGFLRRICKLLFYGIRPVFVFDGGAPALKRN 86
Query: 209 TISTLEKDRDQLLLERGKQTRLAST-ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASL 267
TIS +K + + +LA + Q+ REA Q P V+ G+ +A S+
Sbjct: 87 TISERKKKKSGAAVS---HVKLAERLLAAQLRREALGHAQANRPP--VSKGKGKAPAGSV 141
Query: 268 ELGNHT 273
+ +T
Sbjct: 142 MINENT 147
>gi|156094601|ref|XP_001613337.1| flap exonuclease [Plasmodium vivax Sal-1]
gi|317376189|sp|A5KAL1.1|FEN1_PLAVS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|148802211|gb|EDL43610.1| flap exonuclease, putative [Plasmodium vivax]
Length = 623
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 20/176 (11%)
Query: 140 IVINKLLVDLIS-DVSIWLHQLTKGTHDLAG-GSVPN------AHLIGLYHRICKLLFFK 191
I I L+ +++ D S+ L+Q D G++ N +H+ GL R KL+
Sbjct: 21 IKIENLMGRVVAIDASMSLYQFIIAIRDSEQYGNLTNESGETTSHISGLMSRSIKLMENG 80
Query: 192 IKPVFVFDGGVPQLKKQTIST-----------LEKDRDQLLLER-GKQTRLASTITEQMS 239
+KP++VFDG P+LK + L+K +++ LE KQ+ +T + +
Sbjct: 81 LKPIYVFDGAPPELKGSELEKRGEKRQKAEELLKKAKEEGNLEEIKKQSGRTVRVTRKQN 140
Query: 240 REAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
EA++LL L G+P + AP EAE+QCA L N T+D+D +FG + + +N
Sbjct: 141 EEAKKLLTLMGIPVVEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKILIRNL 196
>gi|55733906|gb|AAV59413.1| putative flap endonuclease 1 [Oryza sativa Japonica Group]
Length = 380
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 23/146 (15%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ-------------------TISTLE 214
+HL G+++R +LL IKPV+VFDG P LKKQ T + E
Sbjct: 62 TSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRHDMYSKREDATKELTEAVEE 121
Query: 215 KDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQ 274
D+D + K ++ +T+Q + E + LL+L GVP + AP EAEA+CA+L + +
Sbjct: 122 GDKDAI----EKFSKRTVKVTKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMVY 177
Query: 275 GVITDDSDIWLFGARTVYKNFFDKKS 300
V ++D D FGA ++ D S
Sbjct: 178 AVASEDMDSLTFGAPRFLRHLMDPSS 203
>gi|281212257|gb|EFA86417.1| xeroderma pigmentosum group G family protein [Polysphondylium
pallidum PN500]
Length = 1515
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW+H + D G NAHL+G + RICKLL +IKP+FVFDG +P LK++
Sbjct: 67 LAIDASIWIHSFIRAFKDSRGDPAENAHLLGFFWRICKLLQHRIKPIFVFDGNIPYLKQR 126
Query: 209 TISTLEKDRDQLLLERGKQTR---LASTITEQMSR 240
TI+ K R+ L + K R L TI Q+++
Sbjct: 127 TINERRKRRENSLAQLEKNQRKMVLLKTIKAQINK 161
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 19/116 (16%)
Query: 191 KIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------KQTRLASTITEQMSREAQ 243
K KP+F + + TL+K +L LE+ +Q + TI + + RE
Sbjct: 957 KTKPIFEY------FTSKEAETLDK---ELELEKISSSRQILQQIKSIKTIDDDILRECH 1007
Query: 244 ELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGART---VYKNFF 296
+LL LFG+PFI +P EAEAQCA L GV+T+DSD LFG + VY++ F
Sbjct: 1008 DLLSLFGIPFITSPTEAEAQCAELFALGLIDGVVTEDSDTLLFGKSSDMVVYRHLF 1063
>gi|170099279|ref|XP_001880858.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644383|gb|EDR08633.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1137
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%)
Query: 223 ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
+R R + IT+QM + +L+LFG+P+I AP EAEAQCA L G+ITDDSD
Sbjct: 727 QRKAAMRDSEDITQQMITQIMTMLRLFGIPYITAPMEAEAQCAELVTLKLVDGIITDDSD 786
Query: 283 IWLFGARTVYKNFFDKKSHVLRYTAPDI 310
++LFG + VYKN F++ V + D+
Sbjct: 787 VFLFGGQRVYKNMFNQSKTVEGFALADL 814
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q D G ++ NAH++G RI KLLF+ IKPVFVFDGG P LK+
Sbjct: 27 LAIDSSIWIYQFQATMRDKDGHALINAHVLGFLRRISKLLFYGIKPVFVFDGGAPTLKRS 86
Query: 209 TISTLEKDRDQLLLERGKQTRLAST-ITEQMSREA 242
T++ +K R R+A + QM REA
Sbjct: 87 TLNERKKKRAGAA---ASHARIAEKLLAAQMRREA 118
>gi|403341860|gb|EJY70247.1| Flap endonuclease 1-1 [Oxytricha trifallax]
Length = 404
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 77/144 (53%), Gaps = 16/144 (11%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQT------ 228
HL+GL+HR + + +KP++VFDG P+LK + ++++++ E KQT
Sbjct: 67 GHLVGLFHRTIQFMENGVKPIWVFDGKPPELKSYVLDQRKENKEKA--EETKQTMIDAGD 124
Query: 229 -----RLAST---ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDD 280
R+A +T +M +A++LL+L G P + APGEAEAQCA + ++D
Sbjct: 125 LEGAKRMAGRSIRVTPEMMEDAKKLLRLMGTPVVEAPGEAEAQCAVIVKHGLAYATASED 184
Query: 281 SDIWLFGARTVYKNFFDKKSHVLR 304
D FG + + F KK +++
Sbjct: 185 MDSLTFGTNVLLRGFNSKKEPIIQ 208
>gi|302843818|ref|XP_002953450.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
gi|300261209|gb|EFJ45423.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
Length = 397
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL--LLERGKQ---- 227
+HL G++ R ++L IKPV+VFDG PQLK+ ++ + R LE+ K+
Sbjct: 62 TSHLQGMFFRTARMLEAGIKPVYVFDGKPPQLKQDQLAMRSERRADANEALEKAKEAGDA 121
Query: 228 ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
++ + +T++ + + + LL+L GVP + AP EAEAQCA + G+ T+D
Sbjct: 122 EAVEKYSKRSVRVTKEHNEDCKRLLRLMGVPVVEAPSEAEAQCAEMAKAGLVYGLATEDM 181
Query: 282 DIWLFGARTVYKNFFDKKS 300
D FGA V ++ S
Sbjct: 182 DALTFGAPRVIRHLMAPSS 200
>gi|71031676|ref|XP_765480.1| flap endonuclease 1 [Theileria parva strain Muguga]
gi|122052062|sp|Q4N3S6.1|FEN1_THEPA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|68352436|gb|EAN33197.1| flap endonuclease 1, putative [Theileria parva]
Length = 494
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 19/162 (11%)
Query: 152 DVSIWLHQLTKGTHD-------LAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S L+Q T D + +H+ GL +R K L + IKPVFVFD P+
Sbjct: 34 DASAALYQFTIAIRDSSYFSSLVNSKGESTSHIYGLMNRCSKFLEYGIKPVFVFDSKPPE 93
Query: 205 LKKQTISTLEKDRDQL------LLERGKQTRLAS------TITEQMSREAQELLQLFGVP 252
LK +T+ + R++ + G + + ++++M+ A++LL+L GVP
Sbjct: 94 LKTKTLEKRRQQREEANASLKKAISEGDKESVKKLVGRTVKVSKEMNESAKKLLRLMGVP 153
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKN 294
I A EAEAQCA L N + V ++D+D +FG + +N
Sbjct: 154 VIEALEEAEAQCAYLVTKNLCRFVASEDTDTLVFGGAFLLRN 195
>gi|301609960|ref|XP_002934532.1| PREDICTED: flap endonuclease GEN homolog 1-like [Xenopus (Silurana)
tropicalis]
Length = 256
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIW+ + + G V HL L+ I L +K VFV +G P++K +
Sbjct: 27 LAVDLSIWVCEAQMVKQMI--GVVHKPHLRNLFFCISSLNLLGVKLVFVSEGEAPKIKAE 84
Query: 209 TISTLEKDRDQLLLERGKQT---RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCA 265
T+S R+++ + + + + +E +L+ G+P++ A GEAEA CA
Sbjct: 85 TMS----KRNEMRYGPSASAAPPKAGRSYFKSVLKECLLMLECLGIPWVQAAGEAEAMCA 140
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVYKNF 295
L + G IT+D D++L+GA+TVY+NF
Sbjct: 141 YLNAHGYVDGCITNDGDVFLYGAQTVYRNF 170
>gi|156344590|ref|XP_001621241.1| hypothetical protein NEMVEDRAFT_v1g145574 [Nematostella vectensis]
gi|156206981|gb|EDO29141.1| predicted protein [Nematostella vectensis]
Length = 67
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 45/59 (76%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
D SI ++Q KG D G VPNA L L+HR+CKLLF+++KPVFVFDGGVP LKK+T+
Sbjct: 1 DASILMNQAVKGMRDGFGNPVPNAPLFVLFHRLCKLLFYRVKPVFVFDGGVPVLKKKTL 59
>gi|403347306|gb|EJY73073.1| hypothetical protein OXYTRI_05797 [Oxytricha trifallax]
Length = 1055
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 57/86 (66%)
Query: 220 LLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITD 279
L+ E K + + +++ ++E + LL+L G+PF+ AP EAE+QCA LE+ GV+T+
Sbjct: 736 LISELEKTAKHFTYFSQENTQELKTLLRLCGIPFVQAPFEAESQCAFLEINGLVDGVVTE 795
Query: 280 DSDIWLFGARTVYKNFFDKKSHVLRY 305
DSD+ LFGAR VY+N FD+ +Y
Sbjct: 796 DSDVLLFGARKVYRNIFDRNKFAEKY 821
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 179 GLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
G RICKLLFF IKPVFVFDG PQ+KK+ +
Sbjct: 53 GFLRRICKLLFFGIKPVFVFDGSTPQIKKKCL 84
>gi|302415469|ref|XP_003005566.1| DNA-repair protein rad2 [Verticillium albo-atrum VaMs.102]
gi|261354982|gb|EEY17410.1| DNA-repair protein rad2 [Verticillium albo-atrum VaMs.102]
Length = 308
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTL--EKDRDQLLLERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ K + LE K+T
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEAKEGLEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q+LL+L GVPFI+AP EAEAQCA L G ++D
Sbjct: 121 EDIEKFSRRTVRVTREHNAECQKLLRLMGVPFIIAPTEAEAQCAVLAKGGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLTF 185
>gi|156845450|ref|XP_001645616.1| hypothetical protein Kpol_1033p65 [Vanderwaltozyma polyspora DSM
70294]
gi|317376167|sp|A7TJ59.1|FEN1_VANPO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|156116281|gb|EDO17758.1| hypothetical protein Kpol_1033p65 [Vanderwaltozyma polyspora DSM
70294]
Length = 377
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 17/156 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q GG + N +HL+G+++R +++ IKP +VFDG P L
Sbjct: 34 DASMSLYQFLIAVRQQDGGQLTNEAGETTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPVL 93
Query: 206 KKQTISTLEKDRDQL---------LLERGKQTRLASTITEQMSREAQELLQLFGVPFIVA 256
K +S R++ E+ KQ R ++++ + EA++LL+L G+P+I A
Sbjct: 94 KSHELSKRTARREETEKKLQEATDQAEKMKQERRLVKVSKEHNDEAKQLLELMGIPYITA 153
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVY 292
P EAE+QCA L ++D D + RT Y
Sbjct: 154 PCEAESQCAELAKCGKVYAAASEDMDTLCY--RTPY 187
>gi|443720454|gb|ELU10206.1| hypothetical protein CAPTEDRAFT_21886 [Capitella teleta]
Length = 377
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ------------LL 221
+HL+G+++R +++ IKPV+VFDG P +K +S R++
Sbjct: 61 TSHLMGIFYRTLRMIDHGIKPVYVFDGKPPDMKSGELSKRAGRREEAQKALEKAEEAGEA 120
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K ++ +T++ + E ++LL L G+PF+ AP EAEAQCASL G H T+D
Sbjct: 121 ENVEKFSKRLVKVTKEHNEECKQLLGLMGIPFVEAPCEAEAQCASLVKGGHVYATGTEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DALTFGSTVLLRHL 194
>gi|68074223|ref|XP_679026.1| flap exonuclease [Plasmodium berghei strain ANKA]
gi|74991237|sp|Q4Z015.1|FEN1_PLABA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|56499663|emb|CAH96377.1| flap exonuclease, putative [Plasmodium berghei]
Length = 478
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 152 DVSIWLHQLTKGTHD-------LAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S+ L+Q D + +H+ GL R KL+ +KP++VFDG P+
Sbjct: 34 DASMSLYQFIIAIRDGDQYGNLMNESGETTSHISGLMSRTIKLMENGLKPIYVFDGAPPE 93
Query: 205 LKKQTIST-----------LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPF 253
LK + L K +++ L E KQ+ +T++ + EA++LL L G+P
Sbjct: 94 LKGSELEKRGEKRQKAEELLIKAKEENLEEIKKQSGRTVRVTKKQNEEAKKLLTLMGIPV 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
I +P EAEAQCA L T+D+D +FG + + +N
Sbjct: 154 IESPCEAEAQCAFLTKYEMAHATATEDADALVFGTKILIRNL 195
>gi|325192518|emb|CCA26951.1| DNA repair protein putative [Albugo laibachii Nc14]
Length = 939
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 207 KQTISTLE----KDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEA 262
K T+ T E K+R+ L+ +Q R ++M + ELL LFGVPF+V P EAEA
Sbjct: 618 KDTVETSEALHQKERELKTLQ-NRQLRDMEGFDDEMVEQVMELLTLFGVPFLVCPMEAEA 676
Query: 263 QCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
QCA+LE G++TDDSDI+ FG VYKN F + V + DI
Sbjct: 677 QCATLEQLGLVDGIVTDDSDIFPFGGTKVYKNIFHHQKFVEAFDTRDI 724
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 42/67 (62%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIWL Q K D G + NAHLIG +HR+ KLL + I+PVFVFDG P LK+Q
Sbjct: 27 LAVDASIWLVQFVKAMRDDQGHMIKNAHLIGTFHRVSKLLHYGIRPVFVFDGQTPVLKQQ 86
Query: 209 TISTLEK 215
T+ K
Sbjct: 87 TLERRRK 93
>gi|295671342|ref|XP_002796218.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284351|gb|EEH39917.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 593
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 22/150 (14%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGG-VPQLKKQTI 210
D+SIWL Q G GG+ N L L++R+ +L F + P+FV+DG PQ K
Sbjct: 63 DISIWLFQAQAGK----GGT--NPELRTLFYRLVRLKGFPVHPLFVYDGPQRPQYK---- 112
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
R +L+ LA I R +++L+QLF PF +APGEAEA+CA L+
Sbjct: 113 ------RGKLVSRNYGAGDLARII-----RRSKDLIQLFRFPFHIAPGEAEAECARLQTF 161
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKS 300
V++DD D +FG+ N+ + S
Sbjct: 162 GAVDAVMSDDVDTIMFGSNVTMMNYSKENS 191
>gi|145514642|ref|XP_001443226.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124447858|sp|A0CYG2.1|FEN12_PARTE RecName: Full=Flap endonuclease 1-2; Short=FEN-1-2; AltName:
Full=Flap structure-specific endonuclease 1-2
gi|124410604|emb|CAK75829.1| unnamed protein product [Paramecium tetraurelia]
Length = 390
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 12/149 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ------LLLERGK- 226
HL+GL++R + L IKPV+VFDG P LK ++ +K +++ L LE+G
Sbjct: 65 TGHLVGLFNRTLQFLENGIKPVWVFDGKPPLLKSGELARRKKLKEEAKVKTELALEQGDM 124
Query: 227 -----QTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
Q + +TI+ M +A ++LQL G P I+AP EAEAQCA L T+D
Sbjct: 125 QQALLQNQRTTTISSIMKEDAIKMLQLMGCPVIIAPCEAEAQCAELCRAGKIYATATEDM 184
Query: 282 DIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
D F + + F KK + D+
Sbjct: 185 DALTFRTPVLLRGFNTKKEPIYEIIYDDM 213
>gi|401825763|ref|XP_003886976.1| flap endonuclease-1 [Encephalitozoon hellem ATCC 50504]
gi|392998133|gb|AFM97995.1| flap endonuclease-1 [Encephalitozoon hellem ATCC 50504]
Length = 345
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 20/178 (11%)
Query: 152 DVSIWLHQLTKGTHD----LAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK 207
D S+ ++Q L G +HL+GL++R +++ I PV+VFDG P++K
Sbjct: 34 DASMSIYQFLIAVRSDGSMLGSGDATTSHLVGLFYRTIRMVELGITPVYVFDGAPPEIKM 93
Query: 208 QTISTLEKDR--------------DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPF 253
+ + + R D+ L+E + + + +T E + LL L G+PF
Sbjct: 94 KELGKRNERRAMADKEYREASEAGDKRLMEMYDKRK--TKVTGVHVEECKRLLGLMGIPF 151
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
AP EAEA CA L GV T+D D FG+ V +NF +S L ++R
Sbjct: 152 ETAPSEAEAYCAFLCRKRIVYGVATEDMDSLTFGSPVVLRNFSGAQSKKLPVVEYNLR 209
>gi|145546103|ref|XP_001458735.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426556|emb|CAK91338.1| unnamed protein product [Paramecium tetraurelia]
Length = 872
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 54/82 (65%)
Query: 230 LASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGAR 289
L S +Q + ++LL LFG+P+I+APGEAEAQCA L+ VIT+DSD++LFGA
Sbjct: 553 LDSVTMQQKFEDIRQLLALFGIPWIIAPGEAEAQCAYLQQNGLVDCVITEDSDVFLFGAT 612
Query: 290 TVYKNFFDKKSHVLRYTAPDIR 311
V K FF+ K+ ++ Y I+
Sbjct: 613 KVLKGFFESKTSLVYYDTQYIK 634
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
DVSIW+ +L G + +G + N HLIG+ RI LL IKPVFVFDG P+LK+QT+
Sbjct: 30 DVSIWMIKLLHGMSN-SGVNFENVHLIGILKRIMFLLENGIKPVFVFDGPAPELKRQTLI 88
Query: 212 TLEKDRDQ 219
+ R Q
Sbjct: 89 KRAQQRQQ 96
>gi|15778123|dbj|BAB68507.1| FEN-1 nuclease [Gallus gallus]
Length = 381
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERGKQ 227
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R Q E G++
Sbjct: 61 TSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERRSEAEKHLQEAQEAGEE 120
Query: 228 TRLAS------TITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
+ +T+Q + E ++LL L G+P++ APGEAEA CA+L T+D
Sbjct: 121 ANIEKFSKRLVKVTQQHTDECKKLLMLMGIPYVEAPGEAEASCATLVKAGKVYAAATEDM 180
Query: 282 DIWLFGA 288
D FG+
Sbjct: 181 DCLTFGS 187
>gi|118405170|ref|NP_001072959.1| flap endonuclease 1 [Gallus gallus]
gi|82082625|sp|Q5ZLN4.1|FEN1_CHICK RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|53129083|emb|CAG31359.1| hypothetical protein RCJMB04_5g12 [Gallus gallus]
Length = 381
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERGKQ 227
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R Q E G++
Sbjct: 61 TSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERRSEAEKHLQEAQEAGEE 120
Query: 228 TRLAS------TITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
+ +T+Q + E ++LL L G+P++ APGEAEA CA+L T+D
Sbjct: 121 ANIEKFSKRLVKVTQQHTDECKKLLMLMGIPYVEAPGEAEASCATLVKAGKVYAAATEDM 180
Query: 282 DIWLFGA 288
D FG+
Sbjct: 181 DCLTFGS 187
>gi|126344550|ref|XP_001362314.1| PREDICTED: flap endonuclease 1-like [Monodelphis domestica]
Length = 380
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERGKQ 227
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R Q L+ G Q
Sbjct: 61 TSHLVGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRGERRAEAERQLQQALDAGAQ 120
Query: 228 ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
++ +T++ + E ++LL+L G+P++ APGEAEA CA+L T+D
Sbjct: 121 EEADKFSKRLVKVTKEHNDECKQLLRLMGIPYLEAPGEAEASCAALAKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|440301029|gb|ELP93476.1| Flap endonuclease, putative [Entamoeba invadens IP1]
Length = 374
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 21/180 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D SI ++Q D G ++ N +H+IG ++R KL+ +KP++VFDG P++
Sbjct: 34 DASILVYQFISAVRDQEGSTLVNEYGETTSHIIGTFYRTIKLMTSGVKPIYVFDGKPPEM 93
Query: 206 K-----------KQTISTLEKDRDQLLLER-GKQTRLASTITEQMSREAQELLQLFGVPF 253
K K+ I LEK ++ E KQ + + +T++ S + ++L++L G+P
Sbjct: 94 KTEELKKRQTNAKEAIEKLEKAKESGDKEEIKKQMKRTARMTKEQSDDVKKLVELMGIPA 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFF---DKKSHVLRYTAPDI 310
I A EAE CA L T+D D G+ V + F +KK + Y+ I
Sbjct: 154 IEANCEAEGTCAELVKSGKCFATATEDMDALTLGSDIVLRKFSASDNKKEPIREYSLKSI 213
>gi|303270953|ref|XP_003054838.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462812|gb|EEH60090.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 125
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIWL Q K D G +PNAHL+G + RIC+LL+ +I+PVFVFDG P LK T
Sbjct: 30 DASIWLVQFVKAMRDERGDMLPNAHLLGFFRRICRLLYHRIRPVFVFDGATPVLKYNTTR 89
Query: 212 TLE--KDRDQLLLERGKQTRLASTITEQMSREA 242
+D DQ ++R + L +T+ ++A
Sbjct: 90 ARRRVRDNDQARMKRTAEKLLLNTMKASALKQA 122
>gi|398396234|ref|XP_003851575.1| hypothetical protein MYCGRDRAFT_100567 [Zymoseptoria tritici
IPO323]
gi|339471455|gb|EGP86551.1| hypothetical protein MYCGRDRAFT_100567 [Zymoseptoria tritici
IPO323]
Length = 393
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTL--EKDRDQLLLERGKQT--- 228
+HL+G+++R +++ IKPV+VFDG P+LK ++ K Q E K+T
Sbjct: 61 TSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFQRKSEAQESHEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + EAQ LL+L G+P+I+AP EAEAQCA L G ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNAEAQRLLKLMGIPYIIAPTEAEAQCAVLARGGKVFAAASEDM 180
Query: 282 DIWLFGA 288
D F +
Sbjct: 181 DTLTFAS 187
>gi|154151645|ref|YP_001405263.1| flap endonuclease-1 [Methanoregula boonei 6A8]
gi|166973700|sp|A7IA59.1|FEN_METB6 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|154000197|gb|ABS56620.1| XPG I [Methanoregula boonei 6A8]
Length = 333
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------LLERG-- 225
+HL G+ R+ L IKPVFVFDG P+LK++T + +K RD+ +ERG
Sbjct: 56 TSHLSGILFRMVNFLEKGIKPVFVFDGKPPELKQETNAERKKLRDEAGEKYKEAVERGDE 115
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
+Q R A+ + E + ++ELL L G+P++ AP E EAQ A + + ++ D
Sbjct: 116 EEAYRQARSATRVDETIIATSKELLDLLGIPYVQAPSEGEAQAAFMVQRGDARFAVSQDY 175
Query: 282 DIWLFGARTVYKNF 295
D LFGA + +N
Sbjct: 176 DTLLFGAPLLMRNL 189
>gi|359487708|ref|XP_002278964.2| PREDICTED: flap endonuclease 1-like [Vitis vinifera]
Length = 384
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 86/178 (48%), Gaps = 20/178 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLA--GGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S+ ++Q GT L G V +HL G++ R +LL +KPV+VFDG P
Sbjct: 34 DASMSIYQFLIVVGRSGTEMLTNEAGEV-TSHLQGMFSRTIRLLEAGLKPVYVFDGKPPD 92
Query: 205 LKKQTISTLEKDRDQLL------LERG------KQTRLASTITEQMSREAQELLQLFGVP 252
LKKQ ++ R LE G K ++ +T+Q + + ++LL+L GVP
Sbjct: 93 LKKQELAKRFSRRADATEDLTEALETGNKEEIEKFSKRTVKVTKQHNEDCKKLLRLMGVP 152
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
I AP EAEAQCA+L V ++D D FGA ++ D S + DI
Sbjct: 153 VIEAPSEAEAQCAALCKSGKVYAVASEDMDSLTFGAPKFLRHLMDPSSRKIPVMEFDI 210
>gi|225681808|gb|EEH20092.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 566
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 22/145 (15%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGG-VPQLKKQTI 210
D+SIWL Q G GG+ N L L++R+ +L F + P+FV+DG PQ K
Sbjct: 38 DISIWLFQAQAGK----GGT--NPELRTLFYRLVRLKGFPVHPLFVYDGPQRPQYK---- 87
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
R +L+ LA I R +++L++LF P+ +APGEAEA+CA L+
Sbjct: 88 ------RGKLVSRNYGAGDLARII-----RRSKDLIELFRFPYHIAPGEAEAECARLQTF 136
Query: 271 NHTQGVITDDSDIWLFGARTVYKNF 295
V++DD D +FG+R N+
Sbjct: 137 GAVDAVMSDDVDTIMFGSRVTIMNY 161
>gi|82914773|ref|XP_728841.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23485391|gb|EAA20406.1| XPG I-region, putative [Plasmodium yoelii yoelii]
Length = 1274
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 4/112 (3%)
Query: 198 FDGGVPQLKKQTI----STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPF 253
F+G + K+TI + EK ++L+ E + TI E+M+ + + LL LFG+P+
Sbjct: 885 FEGISDDMDKETIDKELNENEKKGEELMKEYKRLKNNNITINEEMNEDIKLLLDLFGIPY 944
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
I +P EAEAQCA L N+ +I+DDSD+ +F +T+ KNFF+KK V Y
Sbjct: 945 IQSPCEAEAQCAYLNNNNYCDAIISDDSDVIVFSGKTIIKNFFNKKKTVEVY 996
>gi|317374903|sp|D3TQJ5.1|FEN1_GLOMM RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|289742451|gb|ADD19973.1| 5'-3' exonuclease [Glossina morsitans morsitans]
Length = 382
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 19/155 (12%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q G + N +HL+G+++R +LL IKPV+VFDG P
Sbjct: 34 DASMCLYQFLIAVR-AEGAQLTNVDGETTSHLMGMFYRTIRLLENGIKPVYVFDGKPPIS 92
Query: 206 KKQTISTLEKDRD--QLLLERG----------KQTRLASTITEQMSREAQELLQLFGVPF 253
K ++ + R+ Q LE+ K R +T++ + EA+ELL+L GVP+
Sbjct: 93 KSGELAKRAERREDAQKALEKATEAGNEADMDKFNRRLVKVTKEHANEAKELLKLMGVPY 152
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
+ AP EAEAQCA+L T+D D FG+
Sbjct: 153 VEAPCEAEAQCAALVKAGKVYATATEDMDALTFGS 187
>gi|444323335|ref|XP_004182308.1| hypothetical protein TBLA_0I01290 [Tetrapisispora blattae CBS 6284]
gi|387515355|emb|CCH62789.1| hypothetical protein TBLA_0I01290 [Tetrapisispora blattae CBS 6284]
Length = 387
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 15/150 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q GG + N +HL+G+++R +++ IKP +VFDG P L
Sbjct: 34 DASMSLYQFLIAVRQQDGGQLTNENGETTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPVL 93
Query: 206 KKQTISTLEKDRD---------QLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVA 256
K ++ + R Q + E+ K R +T++ + EA++LL L G+P+I A
Sbjct: 94 KSHELTKRSERRAETEKQLAEAQDIAEKIKHERRLVKVTKEHNEEAKKLLGLMGIPYITA 153
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLF 286
P EAEAQCA L ++D D +
Sbjct: 154 PSEAEAQCAELAKAGVVYAAASEDMDTLCY 183
>gi|221508520|gb|EEE34089.1| DNA-repair protein xp-G, putative [Toxoplasma gondii VEG]
Length = 2004
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 48/74 (64%)
Query: 234 ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYK 293
ITE+M + LL+ FGVPFI APGEAEA A L N VI+DDSD +FGAR +Y+
Sbjct: 1421 ITERMKDQVIALLRAFGVPFITAPGEAEATAAYLTKQNLADAVISDDSDALVFGAREIYR 1480
Query: 294 NFFDKKSHVLRYTA 307
NFF+ K V Y A
Sbjct: 1481 NFFENKKSVEMYEA 1494
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 11/89 (12%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D +IWL Q G +P AHL+G ++R+C+LLFF+I+P+ VFDG P LK+QT+
Sbjct: 30 DAAIWLVQFLHAMKLPDGSPMPAAHLVGFFNRLCRLLFFEIRPIIVFDGPPPFLKRQTLL 89
Query: 212 TLEKDRDQ-----------LLLERGKQTR 229
T ++ R Q LLL R K+ R
Sbjct: 90 TRKRQRQQQEKNLRSVVARLLLNRLKEQR 118
>gi|221487998|gb|EEE26212.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 2004
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 48/74 (64%)
Query: 234 ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYK 293
ITE+M + LL+ FGVPFI APGEAEA A L N VI+DDSD +FGAR +Y+
Sbjct: 1421 ITERMKDQVIALLRAFGVPFITAPGEAEATAAYLTKQNLADAVISDDSDALVFGAREIYR 1480
Query: 294 NFFDKKSHVLRYTA 307
NFF+ K V Y A
Sbjct: 1481 NFFENKKSVEMYEA 1494
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 11/89 (12%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D +IWL Q G +P AHL+G ++R+C+LLFF+I+P+ VFDG P LK+QT+
Sbjct: 30 DAAIWLVQFLHAMKLPDGSPMPAAHLVGFFNRLCRLLFFEIRPIIVFDGPPPFLKRQTLL 89
Query: 212 TLEKDRDQ-----------LLLERGKQTR 229
T ++ R Q LLL R K+ R
Sbjct: 90 TRKRQRQQQEKNLRSVVARLLLNRLKEQR 118
>gi|219850742|ref|YP_002465174.1| flap endonuclease-1 [Methanosphaerula palustris E1-9c]
gi|254788674|sp|B8GIA0.1|FEN_METPE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|219545001|gb|ACL15451.1| XPG I domain protein [Methanosphaerula palustris E1-9c]
Length = 333
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------LLERG-- 225
+HL G++ R + L I+PV++FDG P LK++TI + + R + L RG
Sbjct: 56 TSHLSGVFFRTLRFLEKGIRPVYIFDGKPPALKQETIESRREVRREAGVQWEAALARGDQ 115
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
KQ R +S +T ++ ++ELL L GVP + AP E EAQ AS+ ++ D
Sbjct: 116 EEAYKQARASSRVTPEIIATSKELLTLMGVPCVQAPSEGEAQAASMAASGAVTYAVSQDY 175
Query: 282 DIWLFGARTVYKNF 295
D LFGA + +N
Sbjct: 176 DSLLFGAPLLVRNL 189
>gi|237832503|ref|XP_002365549.1| RAD2 endonuclease, putative [Toxoplasma gondii ME49]
gi|211963213|gb|EEA98408.1| RAD2 endonuclease, putative [Toxoplasma gondii ME49]
Length = 2004
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 48/74 (64%)
Query: 234 ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYK 293
ITE+M + LL+ FGVPFI APGEAEA A L N VI+DDSD +FGAR +Y+
Sbjct: 1421 ITERMKDQVIALLRAFGVPFITAPGEAEATAAYLTKQNLADAVISDDSDALVFGAREIYR 1480
Query: 294 NFFDKKSHVLRYTA 307
NFF+ K V Y A
Sbjct: 1481 NFFENKKSVEMYEA 1494
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 11/89 (12%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D +IWL Q G +P AHL+G ++R+C+LLFF+I+P+ VFDG P LK+QT+
Sbjct: 30 DAAIWLVQFLHAMKLPDGSPMPAAHLVGFFNRLCRLLFFEIRPIIVFDGPPPFLKRQTLL 89
Query: 212 TLEKDRDQ-----------LLLERGKQTR 229
T ++ R Q LLL R K+ R
Sbjct: 90 TRKRQRQQQEKNLRSVVARLLLNRLKEQR 118
>gi|390332710|ref|XP_001197560.2| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like
[Strongylocentrotus purpuratus]
Length = 384
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIST-----------LEKDRDQLLL 222
+HL+G+++R +++ +KP +VFDG P++K ++ LEK ++Q
Sbjct: 61 TSHLMGIFYRTIRMIEHGLKPCYVFDGKPPEMKSGELTKRKEMRAEAEKELEKAKEQGDQ 120
Query: 223 ER-GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K + +T+Q + E Q LL+L GVP++ APGEAEAQC L GV T+D
Sbjct: 121 ENMNKFEKRLVKVTKQHNEECQHLLKLMGVPYVKAPGEAEAQCCELVKKGKLYGVGTEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG + ++
Sbjct: 181 DALTFGGNVLLRHL 194
>gi|453084814|gb|EMF12858.1| flap endonuclease [Mycosphaerella populorum SO2202]
Length = 393
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTL--EKDRDQLLLERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ K Q E K+T
Sbjct: 61 TSHLMGMFYRTLRIVDNGIKPLYVFDGAPPKLKSGELAKRFQRKSEAQEQHEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T++ + EAQ LL+L GVP+IVAP EAEAQCA L ++D
Sbjct: 121 EEVERFSRRTVRVTKEHNAEAQRLLKLMGVPYIVAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLFGA 288
D F A
Sbjct: 181 DTLTFNA 187
>gi|84994172|ref|XP_951808.1| 5'-3' exonuclease [Theileria annulata strain Ankara]
gi|74952859|sp|Q4UFP0.1|FEN1_THEAN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|65301969|emb|CAI74076.1| 5'-3' exonuclease, putative [Theileria annulata]
Length = 506
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 19/165 (11%)
Query: 149 LISDVSIWLHQLTKGTHD-------LAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGG 201
L D S L+Q T D + +H+ GL +R KLL + IKPVFVFD
Sbjct: 31 LAIDASAALYQFTIAIRDSSYFSSLVNSKGESTSHIYGLMNRCSKLLEYGIKPVFVFDSK 90
Query: 202 VPQLKKQTISTLEKDRDQL-------LLERGKQT--RLAS---TITEQMSREAQELLQLF 249
P+LK +T+ + R++ + E K++ +L +T+ M+ A++LL+L
Sbjct: 91 PPELKSKTLDKRRQKREEAKTDFKKAISEGDKESAKKLVGRTVKVTKDMNDSAKKLLRLM 150
Query: 250 GVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKN 294
G+P I A EAEAQCA L N V ++D+D +FG + +N
Sbjct: 151 GIPVIEALEEAEAQCAYLVTKNLCHFVASEDTDTLVFGGWFLLRN 195
>gi|291239422|ref|XP_002739622.1| PREDICTED: flap structure-specific endonuclease 1-like
[Saccoglossus kowalevskii]
Length = 379
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------LLERG-- 225
+HL+G+++R +++ IKP++VFDG P LK +S + R++ E G
Sbjct: 61 TSHLMGMFYRTIRMVDHGIKPLYVFDGKPPDLKSGELSKRAEKREEAEKALAKAEEEGET 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K R +T++ + E ++LL G+P++ APGEAEAQCA L T+D
Sbjct: 121 ENVNKYQRRLVKVTKEHNEECKKLLTFMGIPYLDAPGEAEAQCAELVKAGKVYATATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ TV ++
Sbjct: 181 DSLTFGSSTVVRHM 194
>gi|449299844|gb|EMC95857.1| hypothetical protein BAUCODRAFT_109503 [Baudoinia compniacensis
UAMH 10762]
Length = 393
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTL--EKDRDQLLLERGKQT--- 228
+HL+GL++R +++ IKP++VFDG P+LK ++ K Q E K+T
Sbjct: 61 TSHLMGLFYRTLRIVDNGIKPLYVFDGAPPKLKSGELAKRFQRKSEAQESHEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + EAQ LL+L GVPFI+AP EAEAQCA L ++D
Sbjct: 121 EEVEKFSRRTVRVTREHNAEAQRLLKLMGVPFIIAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLFGA 288
D F +
Sbjct: 181 DTLTFNS 187
>gi|358333862|dbj|GAA32436.2| flap endonuclease-1 [Clonorchis sinensis]
Length = 350
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK-----KQTISTLEKDRD-------QLL 221
+HL+G+++R +++ IKPV+VF+G P +K K+T +E R+ + L
Sbjct: 25 TSHLMGMFYRTIRMIENGIKPVYVFEGKPPSMKAGELAKRTERRIESSRELAKAEEEEDL 84
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K ++ +T Q + + +ELL+L GVP+I APGEAEAQCA+L V T+D
Sbjct: 85 EAIEKFSKRLVKVTPQHNDDCKELLRLMGVPYIKAPGEAEAQCAALAKAGKVYAVGTEDM 144
Query: 282 DIWLFGA 288
D FG
Sbjct: 145 DALAFGC 151
>gi|383859686|ref|XP_003705323.1| PREDICTED: flap endonuclease 1-like [Megachile rotundata]
Length = 383
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 17/161 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G +HL+G+++R +L+ IKP++VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLATVDGETTSHLMGMFYRTIRLVEQGIKPIYVFDGKPPNLK 93
Query: 207 KQTISTLEKDRD--QLLLERGKQT----------RLASTITEQMSREAQELLQLFGVPFI 254
++ + RD Q LL+ ++ R +T+ + EA++LL+L G+P++
Sbjct: 94 GGELAKRAEKRDEAQKLLQAAEEAGNAEDIEKFNRRLVKVTQVHADEAKQLLKLMGIPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
AP EAEAQCA+L T+D D FG + +
Sbjct: 154 EAPCEAEAQCAALVKAGKVFATATEDMDALTFGCNVLLRRL 194
>gi|302688649|ref|XP_003034004.1| hypothetical protein SCHCODRAFT_81803 [Schizophyllum commune H4-8]
gi|300107699|gb|EFI99101.1| hypothetical protein SCHCODRAFT_81803 [Schizophyllum commune H4-8]
Length = 452
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLL----------- 222
+HL+GL++R +++ IKP +VFDG P LKK +S + RD+
Sbjct: 62 TSHLMGLFYRTIRIVENGIKPAYVFDGKPPDLKKGVLSKRFEKRDEAKEGEEEAKETGTA 121
Query: 223 -ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K +R +T + + E + LL+L G+P++ AP EAEAQCA L G ++D
Sbjct: 122 AEVDKFSRRQVKVTREHNEECRRLLKLMGIPYVEAPSEAEAQCAELARGGKVYAAGSEDM 181
Query: 282 DIWLFGARTVYKNF 295
D F A ++++
Sbjct: 182 DTLTFNAPILFRHL 195
>gi|393220967|gb|EJD06452.1| PIN domain-like protein, partial [Fomitiporia mediterranea MF3/22]
Length = 1250
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%)
Query: 219 QLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
QL +R R A + + M + +L+LFG+P+I AP EAEAQCA+L GVIT
Sbjct: 800 QLREQRKAAMRDAEDVNQAMIAQIMTMLRLFGIPYITAPMEAEAQCAALVDLGLVDGVIT 859
Query: 279 DDSDIWLFGARTVYKNFFDKKSHV 302
DDSD++LFGA+ VYKN F++ V
Sbjct: 860 DDSDVFLFGAKRVYKNMFNQSKTV 883
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q D G + NAH++G RICKLLF+ IKPVFVFDGG P LK+ TI+
Sbjct: 30 DSSIWIYQFQATMRDKEGRGLVNAHVLGFLRRICKLLFYGIKPVFVFDGGAPALKRMTIA 89
Query: 212 TLEKDR 217
+K +
Sbjct: 90 ERKKKK 95
>gi|395332541|gb|EJF64920.1| PIN domain-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 1217
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 4/103 (3%)
Query: 204 QLKKQTISTLEKDRDQLLLERGKQTRLA----STITEQMSREAQELLQLFGVPFIVAPGE 259
Q+K + + T+ ++ D+ + E KQ + A IT+QM + +L+LFG+P+I AP E
Sbjct: 767 QVKGKDMDTIRREIDEEIRELNKQKKNAMRDSEDITQQMISQIMIMLRLFGIPYITAPME 826
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHV 302
AEAQCA+L G+ITDDSD++LFG V KN F++ V
Sbjct: 827 AEAQCAALLSLGLVDGIITDDSDVFLFGGGRVLKNMFNQSKTV 869
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 43/66 (65%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q D G + NAH++G RICKLLF+ IKPVFVFDGG P LK TI+
Sbjct: 4 DSSIWIYQFQATMRDKEGRGLVNAHVLGFLRRICKLLFYGIKPVFVFDGGAPALKMATIA 63
Query: 212 TLEKDR 217
+K +
Sbjct: 64 ERKKKK 69
>gi|242014497|ref|XP_002427926.1| Flap endonuclease 1-B, putative [Pediculus humanus corporis]
gi|212512410|gb|EEB15188.1| Flap endonuclease 1-B, putative [Pediculus humanus corporis]
Length = 380
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 17/161 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G +HL+G ++R +++ IKPV+VFDG P+LK
Sbjct: 34 DASMTLYQFLIAVRSEGAQLTDSSGETTSHLMGTFYRTIRMVENGIKPVYVFDGKPPELK 93
Query: 207 KQTISTLEKDRD--QLLLERGKQT----------RLASTITEQMSREAQELLQLFGVPFI 254
+S + R+ Q L + +++ R +T+ E +ELL+L G+P+I
Sbjct: 94 SGELSKRAEKREEAQKALAKAEESGNTEEVDKFSRRLVKVTKDHVAECKELLKLMGIPYI 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
AP EAEAQCA+L T+D D FG+ + ++
Sbjct: 154 EAPCEAEAQCAALVKAGKVYATATEDMDALTFGSNIILRHL 194
>gi|13541391|ref|NP_111079.1| flap endonuclease-1 [Thermoplasma volcanium GSS1]
gi|28380020|sp|Q97B98.1|FEN_THEVO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|14324774|dbj|BAB59701.1| FLAP endonuclease-1 [Thermoplasma volcanium GSS1]
Length = 335
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 87/163 (53%), Gaps = 19/163 (11%)
Query: 145 LLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
+L L+S+V + GT + +HL G+++R L+ IKP+FVFDG
Sbjct: 31 ILYQLLSNVRQY-----DGTPLMDSSGNVTSHLYGIFYRTVNLVENGIKPIFVFDGKPSP 85
Query: 205 LKKQT--ISTLEKDRDQLLLE----RGKQ------TRLASTITEQMSREAQELLQLFGVP 252
LK +T I L K++ + LE RG++ +R+ + IT Q+ + +ELL G+P
Sbjct: 86 LKNRTLEIRQLAKEKAKAELEEAISRGEENLKQYYSRI-NYITPQIVNDTKELLTYMGIP 144
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
++ AP E EAQ AS GVI+ D D LFGA+ + +NF
Sbjct: 145 YVDAPSEGEAQ-ASYMTRKDADGVISQDYDCLLFGAKKILRNF 186
>gi|299749580|ref|XP_001836208.2| flap structure-specific endonuclease [Coprinopsis cinerea
okayama7#130]
gi|298408502|gb|EAU85580.2| flap structure-specific endonuclease [Coprinopsis cinerea
okayama7#130]
Length = 1200
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 64/105 (60%), Gaps = 4/105 (3%)
Query: 202 VPQLKKQTISTLEKDRDQLLLERGKQTRLA----STITEQMSREAQELLQLFGVPFIVAP 257
V Q+K + + ++ ++ D+ + +Q R A + +QM + +L+LFG+P+I AP
Sbjct: 756 VSQVKGRDLDSVRREIDEEIATLNQQKRNAMRDAEDVNQQMISQIMTMLRLFGIPYITAP 815
Query: 258 GEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHV 302
EAEAQCA L GVITDDSD++LFGA V+KN F++ V
Sbjct: 816 MEAEAQCAELTSLGLVDGVITDDSDVFLFGASRVFKNMFNQSKTV 860
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 133 MLEF--RCNIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFF 190
ML F R V K++ D SIW++Q D G + NAH++G RI KLLF+
Sbjct: 1 MLTFGTRLETVEGKVMA---IDSSIWIYQFQATMRDKEGRGLVNAHVLGFLRRIAKLLFY 57
Query: 191 KIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAST-ITEQMSREA 242
IKPVFVFDGG P LK+ T++ + + + +LA + QM REA
Sbjct: 58 GIKPVFVFDGGAPTLKRATLNERRRKKSGAAV---SHIKLAEKLLAAQMRREA 107
>gi|156555588|ref|XP_001605190.1| PREDICTED: flap endonuclease GEN-like [Nasonia vitripennis]
Length = 736
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S W+ T ++A P HL L+ R L I PVFV +G P LK TI+
Sbjct: 30 DLSCWVVDSQSVTDNIAQ---PKMHLRNLFFRTSYFLLHDIFPVFVLEGAAPTLKHNTIA 86
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
R +++ + S + +E +E+L+ G+ + GEAEA CA L
Sbjct: 87 KRNDIRHGREIKKTNKKAGRSRFNYVL-KECEEMLKYMGLTCVKGYGEAEAMCAYLNEDG 145
Query: 272 HTQGVITDDSDIWLFGARTVYKNF 295
G I+ DSD L+GA+ VY+NF
Sbjct: 146 LVDGCISQDSDCLLYGAKIVYRNF 169
>gi|352681676|ref|YP_004892200.1| flap-structure endonuclease [Thermoproteus tenax Kra 1]
gi|350274475|emb|CCC81120.1| flap-structure endonuclease [Thermoproteus tenax Kra 1]
Length = 346
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI----STLEKDRDQLLL------- 222
+HL GL++R L+ I+PV+VFDG P+LK++ I + EK R+Q+
Sbjct: 59 TSHLNGLFYRTINLVEAGIRPVYVFDGKPPELKRREIEARRAAKEKAREQMAKAAAEGKT 118
Query: 223 -ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K + IT+ M+ +A+ LL G+P++ AP E EAQ A + G + D
Sbjct: 119 EEVAKYAKRVVYITDSMAEDAKALLTAMGIPWVQAPSEGEAQAAHMAAKGSAWGAGSQDY 178
Query: 282 DIWLFGARTVYKNF 295
D LFGA + +N
Sbjct: 179 DSLLFGAPRLVRNL 192
>gi|449329677|gb|AGE95947.1| structure-specific endonuclease of the XPG/RAD2 family
[Encephalitozoon cuniculi]
Length = 345
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 19/184 (10%)
Query: 144 KLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVP 203
K+ +D + +L + G L P +HL+G ++R +++ I PV+VFDG P
Sbjct: 30 KVAIDASMSMYQFLIAVRSGGATLGNEDSPTSHLVGFFYRTIRMVELGITPVYVFDGVPP 89
Query: 204 QLKKQTISTLEKDR--------------DQLLLERGKQTRLASTITEQMSREAQELLQLF 249
++K + + ++ R D+ L+E + + + +T E + LL L
Sbjct: 90 EIKMKELEKRKERRAAADREYREASEVGDKELMEMYDKRK--TKVTGVHVDECKRLLGLM 147
Query: 250 GVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSH---VLRYT 306
G+PF AP EAEA CA L GV T+D D FG+ V +NF +S V+ +
Sbjct: 148 GIPFETAPSEAEAYCALLCKKKAVYGVATEDMDALTFGSPVVLRNFNGTQSKRLPVMEHN 207
Query: 307 APDI 310
P I
Sbjct: 208 LPQI 211
>gi|390365680|ref|XP_003730870.1| PREDICTED: uncharacterized protein LOC100889325 [Strongylocentrotus
purpuratus]
Length = 1543
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 79/184 (42%), Gaps = 25/184 (13%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D++IWL + + G V HL L+ R L +K VFV DG P+LK + I+
Sbjct: 30 DLAIWLVESQVTGMKMMQGRVSKPHLRNLFFRASNFLRLGVKLVFVIDGTPPELKWEEIA 89
Query: 212 TLEKDR-----------------DQLLLERGKQTRLASTITEQMSR--------EAQELL 246
+ R RG+ + SR E QELL
Sbjct: 90 RRNEVRLGGGGGGARGGGGGWRGGGRGGWRGRGRGGGGGGVRKASRSHFSGWLKECQELL 149
Query: 247 QLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYT 306
+L GVP I + GEAEA CA+L G +T+D D +L+GAR VY+N V Y
Sbjct: 150 ELMGVPCIQSKGEAEAMCAALNSAGIVDGCMTEDGDAFLYGARIVYRNLNMATGKVDCYR 209
Query: 307 APDI 310
DI
Sbjct: 210 MDDI 213
>gi|19173066|ref|NP_597617.1| STRUCTURE-SPECIFIC ENDONUCLEASE OF THE XPG/RAD2 FAMILY
[Encephalitozoon cuniculi GB-M1]
gi|74621278|sp|Q8SS91.1|FEN1_ENCCU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|19168733|emb|CAD26252.1| STRUCTURE-SPECIFIC ENDONUCLEASE OF THE XPG/RAD2 FAMILY
[Encephalitozoon cuniculi GB-M1]
Length = 345
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 19/184 (10%)
Query: 144 KLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVP 203
K+ +D + +L + G L P +HL+G ++R +++ I PV+VFDG P
Sbjct: 30 KVAIDASMSMYQFLIAVRSGGATLGNEDSPTSHLVGFFYRTIRMVELGITPVYVFDGVPP 89
Query: 204 QLKKQTISTLEKDR--------------DQLLLERGKQTRLASTITEQMSREAQELLQLF 249
++K + + ++ R D+ L+E + + + +T E + LL L
Sbjct: 90 EIKMKELEKRKERRAAADREYREASEVGDKELMEMYDKRK--TKVTGVHVDECKRLLGLM 147
Query: 250 GVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSH---VLRYT 306
G+PF AP EAEA CA L GV T+D D FG+ V +NF +S V+ +
Sbjct: 148 GIPFETAPSEAEAYCALLCKKKAVYGVATEDMDALTFGSPVVLRNFNGTQSKRLPVMEHN 207
Query: 307 APDI 310
P I
Sbjct: 208 LPQI 211
>gi|396081098|gb|AFN82717.1| flap endonuclease-1 [Encephalitozoon romaleae SJ-2008]
Length = 345
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 167 LAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR--------- 217
L G +HL+GL++R +++ I PV+VFDG P++K + + + R
Sbjct: 53 LGNGDTTTSHLVGLFYRTIRMVELGITPVYVFDGVPPEVKMKELGKRNERRATADKEYKD 112
Query: 218 -----DQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
D+ L+E + + + +T E + LL L G+PF AP EAEA CA L
Sbjct: 113 ASEAGDKRLMEMYDKRK--TKVTGIHVEECKRLLGLMGIPFETAPSEAEAYCALLCKKRA 170
Query: 273 TQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
GV T+D D FG+ V +NF +S L ++R
Sbjct: 171 VYGVATEDMDSLTFGSPVVLRNFSGTRSKKLPVVEYNLR 209
>gi|74196654|dbj|BAE34428.1| unnamed protein product [Mus musculus]
Length = 739
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 190 FKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLF 249
+K VFV +G P LK IS + R + + + + + + RE E+L+
Sbjct: 1 MNVKLVFVMEGEPPMLKADVISKRTQTR-YGPSGKSRSQKTGRSHFKSVLRECLEMLECL 59
Query: 250 GVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFF--DKKSHVLRYTA 307
G+P++ A GEAEA CA L H G +T+D D +L+GA+TVY+NF K HV YT
Sbjct: 60 GMPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVDCYTI 119
Query: 308 PDIR 311
I+
Sbjct: 120 SSIK 123
>gi|116180814|ref|XP_001220256.1| hypothetical protein CHGG_01035 [Chaetomium globosum CBS 148.51]
gi|88185332|gb|EAQ92800.1| hypothetical protein CHGG_01035 [Chaetomium globosum CBS 148.51]
Length = 1765
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 55/91 (60%)
Query: 206 KKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCA 265
+++ E++ L ++ K R A +T+ M E Q LL LFG+P+I AP EAEAQCA
Sbjct: 795 QRENQQAYEQELRALRAQQKKDRRDADEVTQVMVTECQALLTLFGIPYITAPMEAEAQCA 854
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVYKNFF 296
L N G++TDDSD +LFG VYKN F
Sbjct: 855 ELVHLNLVDGIVTDDSDTFLFGGTRVYKNMF 885
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + RICKLL+ +KPVFVFDGG P LK+
Sbjct: 27 LAIDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRICKLLWHGVKPVFVFDGGAPALKRA 86
Query: 209 TI 210
T+
Sbjct: 87 TL 88
>gi|3047083|gb|AAC13596.1| similar to FLAP endonuclease-1 (SW:P39748) [Arabidopsis thaliana]
Length = 362
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------LERG-- 225
N HL G+++R +LL IKPV+VFDG P+LK+Q ++ R +E G
Sbjct: 95 NRHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNK 154
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K ++ +T+Q + + + LL+L GVP + A EAEAQCA+L GV ++D
Sbjct: 155 EDIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDM 214
Query: 282 DIWLFGARTVYKNFFDKKSH 301
D FGA ++ D S
Sbjct: 215 DSLTFGAPKFLRHLMDPSSR 234
>gi|156553807|ref|XP_001603401.1| PREDICTED: flap endonuclease 1-like [Nasonia vitripennis]
Length = 381
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G + +HL+G ++R +L+ IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSEGAQLTSVDGETTSHLMGTFYRTIRLVENGIKPVYVFDGKPPTLK 93
Query: 207 KQTISTLEKDRD------QLLLERG------KQTRLASTITEQMSREAQELLQLFGVPFI 254
++ + R+ Q E G K R +T+Q EA++LL L G+PFI
Sbjct: 94 GGELAKRAERREEAQKQLQAAEEAGNVEDVDKFNRRLVKVTKQHGEEAKQLLTLMGIPFI 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
AP EAEAQCA++ T+D D FG + +
Sbjct: 154 DAPCEAEAQCAAMVKSGKVYATATEDMDALTFGCNVLLRRL 194
>gi|320586182|gb|EFW98861.1| DNA excision repair protein rad2 [Grosmannia clavigera kw1407]
Length = 1287
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 61/104 (58%)
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+++ + E++ L ++ K R A +T M E Q LL+LFG+P+I AP EAEAQC+
Sbjct: 875 RESQAVFEQEVKALRNQQKKDRRDADEVTMVMVSECQALLRLFGIPYITAPMEAEAQCSE 934
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
L G++TDDSD +LFG VYKN F+ V + A D+
Sbjct: 935 LVSLGLVDGIVTDDSDTFLFGGTRVYKNMFNGNKFVECFLAADL 978
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G ++ N+H++G + R+CKLL+F I PVFVFDGG P LK+
Sbjct: 27 LAVDASIWIYQFLKAVRDKEGNALRNSHVVGFFRRVCKLLWFGILPVFVFDGGAPALKRS 86
Query: 209 TI 210
T+
Sbjct: 87 TL 88
>gi|238481386|ref|NP_001154740.1| flap endonuclease-1 [Arabidopsis thaliana]
gi|317374929|sp|O65251.2|FEN1_ARATH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|332006194|gb|AED93577.1| flap endonuclease-1 [Arabidopsis thaliana]
Length = 383
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------LERG-- 225
+HL G+++R +LL IKPV+VFDG P+LK+Q ++ R +E G
Sbjct: 62 TSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNK 121
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K ++ +T+Q + + + LL+L GVP + A EAEAQCA+L GV ++D
Sbjct: 122 EDIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDM 181
Query: 282 DIWLFGARTVYKNFFDKKSH 301
D FGA ++ D S
Sbjct: 182 DSLTFGAPKFLRHLMDPSSR 201
>gi|296089863|emb|CBI39682.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 86/178 (48%), Gaps = 20/178 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLA--GGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S+ ++Q GT L G V +HL G++ R +LL +KPV+VFDG P
Sbjct: 34 DASMSIYQFLIVVGRSGTEMLTNEAGEV-TSHLQGMFSRTIRLLEAGLKPVYVFDGKPPD 92
Query: 205 LKKQTISTLEKDRDQLL------LERG------KQTRLASTITEQMSREAQELLQLFGVP 252
LKKQ ++ R LE G K ++ +T+Q + + ++LL+L GVP
Sbjct: 93 LKKQELAKRFSRRADATEDLTEALETGNKEEIEKFSKRTVKVTKQHNEDCKKLLRLMGVP 152
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
I AP EAEAQCA+L V ++D D FGA ++ D S + DI
Sbjct: 153 VIEAPSEAEAQCAALCKSGKVYAVASEDMDSLTFGAPKFLRHLMDPSSRKIPVMEFDI 210
>gi|365989632|ref|XP_003671646.1| hypothetical protein NDAI_0H02290 [Naumovozyma dairenensis CBS 421]
gi|343770419|emb|CCD26403.1| hypothetical protein NDAI_0H02290 [Naumovozyma dairenensis CBS 421]
Length = 384
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 21/158 (13%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q GG + N +HL+G+++R +++ IKP +VFDG P L
Sbjct: 34 DASMSLYQFLIAVRQQDGGQLTNDAGETTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPVL 93
Query: 206 KK-----------QTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFI 254
K +T + DQ E+ KQ R ++++ + EA++LL+L G+P++
Sbjct: 94 KSHELDKRIARRAETEKKFAEATDQA--EKIKQERRLVKVSKEHNDEAKKLLELMGIPYV 151
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVY 292
APGEAEAQCA L ++D D + RT Y
Sbjct: 152 NAPGEAEAQCAELAKKGKVYAAASEDMDTLCY--RTPY 187
>gi|340717150|ref|XP_003397050.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like [Bombus
terrestris]
Length = 381
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 17/161 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q + G + +HL+G ++R +L+ IKPV+VFDG P LK
Sbjct: 34 DASMCLYQFLIAVRSDGAQLTSVHGETTSHLMGTFYRTIRLVEQGIKPVYVFDGKPPDLK 93
Query: 207 KQTISTLEKDRD--QLLLERGKQT----------RLASTITEQMSREAQELLQLFGVPFI 254
++ ++ RD Q LL+ ++ R +T++ + E ++LLQL G+P+I
Sbjct: 94 GGELAKRDERRDETQKLLQAAEEAGNAKDIEKFNRRLVKVTKEHALETKQLLQLMGIPYI 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
AP EAEAQCA+L T+D D FG + +
Sbjct: 154 DAPCEAEAQCAALVKAGKVFATATEDMDALTFGCNILLRRL 194
>gi|343172070|gb|AEL98739.1| endonuclease, partial [Silene latifolia]
gi|343172072|gb|AEL98740.1| endonuclease, partial [Silene latifolia]
Length = 325
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 12/139 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERG-- 225
+HL G++ R +LL IKPV+VFDG P LKKQ ++ R +E G
Sbjct: 62 TSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLSAAIEEGDK 121
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K ++ +T+Q + + ++LL L GVP + AP EAEAQCA+L V ++D
Sbjct: 122 EGIEKFSKRTVKVTKQHNEDCKKLLGLMGVPVVEAPSEAEAQCAALCKNGKVYAVASEDM 181
Query: 282 DIWLFGARTVYKNFFDKKS 300
D FGA ++ D S
Sbjct: 182 DSLTFGACKFLRHLMDPSS 200
>gi|347482295|gb|AEO98236.1| flap endonuclease-1 [Emiliania huxleyi virus 203]
gi|347601360|gb|AEP15846.1| flap structure-specific endonuclease 1 [Emiliania huxleyi virus
207]
gi|357972633|gb|AET97906.1| flap endonuclease-1 [Emiliania huxleyi virus 201]
Length = 358
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 155 IWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLE 214
I + Q G + G V +HL G+++R +L+ IKPV+VFDG P LKK+ +
Sbjct: 44 IAIRQGPSGQLAASEGEV-TSHLTGIFYRTIRLIEAGIKPVYVFDGKPPVLKKKELDKRN 102
Query: 215 KDRDQLL---------LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCA 265
+ + Q L E KQ + + T + S E +++L L G+P I AP EAEA CA
Sbjct: 103 ERQAQALSELKLTDDATEVEKQEKRSVRATREHSEEVKKMLTLMGIPVIQAPCEAEATCA 162
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVYKNFFD---KKSHVLRYTAPDI 310
+ T+D D FG+ V ++ KK + Y+ P+I
Sbjct: 163 AYVKTGKAYATATEDMDSLTFGSTYVIRHINSTDQKKQPTVEYSLPNI 210
>gi|42570539|ref|NP_850877.2| flap endonuclease-1 [Arabidopsis thaliana]
gi|332006193|gb|AED93576.1| flap endonuclease-1 [Arabidopsis thaliana]
Length = 453
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------LERG-- 225
+HL G+++R +LL IKPV+VFDG P+LK+Q ++ R +E G
Sbjct: 62 TSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNK 121
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K ++ +T+Q + + + LL+L GVP + A EAEAQCA+L GV ++D
Sbjct: 122 EDIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDM 181
Query: 282 DIWLFGARTVYKNFFDKKSH 301
D FGA ++ D S
Sbjct: 182 DSLTFGAPKFLRHLMDPSSR 201
>gi|328792793|ref|XP_001120033.2| PREDICTED: flap endonuclease GEN-like [Apis mellifera]
Length = 713
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Query: 173 PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAS 232
P +L LY R LL I PVFV +G P LK TI+ R ++ Q +
Sbjct: 48 PKMYLRNLYFRTIFLLMQGILPVFVLEGKAPALKYNTIAKRNDIRSGFQEKKSIQKK-GR 106
Query: 233 TITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVY 292
T +++ E +E+L+ G+ + GEAEA CA L G I+ DSD +L+GA+ VY
Sbjct: 107 TQFKKILNECKEMLEYMGLACVQGHGEAEAMCAYLNEDGLVDGCISQDSDCFLYGAKVVY 166
Query: 293 KNF 295
+NF
Sbjct: 167 RNF 169
>gi|360043194|emb|CCD78606.1| putative xp-G/rad2 DNA repair endonuclease family member
[Schistosoma mansoni]
Length = 293
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+SIW+ D + +P HL L+ R+ LL P+ V DG P LK +
Sbjct: 30 DLSIWI------CGDKSITPLPALHLRNLFFRLVGLLRQNTLPIAVLDGVAPSLKSDVMK 83
Query: 212 TLE-KDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ K ++ ++ + L ++S+E +LL FG+P++ +PGEAEA CA L
Sbjct: 84 QRQQKWTGKITTQKCTKPNLNRIRFSKVSQECIQLLNSFGIPWVQSPGEAEAMCAFLNSN 143
Query: 271 NHTQGVITDDSDIWLFGARTVYKNF 295
IT+D D +L+GA TVY++F
Sbjct: 144 KLVDACITNDGDAFLYGAETVYRHF 168
>gi|336375373|gb|EGO03709.1| hypothetical protein SERLA73DRAFT_101960 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388429|gb|EGO29573.1| hypothetical protein SERLADRAFT_445364 [Serpula lacrymans var.
lacrymans S7.9]
Length = 319
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 89/171 (52%), Gaps = 18/171 (10%)
Query: 139 NIVINKLLVD-----LISDVSIWLHQ-LTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKI 192
+I INK L + L D +WLH+ + +LA G ++ HR+ L KI
Sbjct: 12 SIQINKHLSEFSGQTLAVDAYVWLHRGIFTCPTELATGKTTTKYVDYAMHRVRLLRHHKI 71
Query: 193 KPVFVFDGGVPQLKKQTISTLEKDRDQLLLE------RGKQTRL------ASTITEQMSR 240
+P VFDGG KK T + ++ RD+ L + +GK T+ +T QM+
Sbjct: 72 QPYIVFDGGPLPAKKGTEAERKQRRDENLAKANALAVQGKHTQAREYYVKCVDVTPQMAF 131
Query: 241 EAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTV 291
+ + L+ GVP++VAP EA+AQ A LE G+IT+DSD+ +FG R V
Sbjct: 132 QLIKALRAEGVPYVVAPYEADAQMAYLERIGLVDGIITEDSDLLVFGCRNV 182
>gi|156398094|ref|XP_001638024.1| predicted protein [Nematostella vectensis]
gi|317374916|sp|A7RRJ0.1|FEN1_NEMVE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|156225141|gb|EDO45961.1| predicted protein [Nematostella vectensis]
Length = 377
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 22/169 (13%)
Query: 139 NIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVF 198
++ I + L+ + SD S QLT + AG + +HL+GL++R +++ IKPV+VF
Sbjct: 36 SMSIYQFLIAVRSDGS----QLT----NEAGETT--SHLMGLFYRTIRMVENGIKPVYVF 85
Query: 199 DGGVPQLKKQTIS--TLEKDRDQLLLERGKQ----------TRLASTITEQMSREAQELL 246
DG PQLK ++ T ++ Q L + ++ +R +T++ + E ++LL
Sbjct: 86 DGKPPQLKSGELAKRTERREEAQKALSKAEEAGDTENIDKFSRRLVRVTKEHNEECKQLL 145
Query: 247 QLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
+L G+P++ AP EAEAQCA+L T+D D FG + ++
Sbjct: 146 KLMGIPYVEAPCEAEAQCAALVKSGKVYATGTEDMDALTFGTTVMLRHL 194
>gi|297812863|ref|XP_002874315.1| hypothetical protein ARALYDRAFT_489493 [Arabidopsis lyrata subsp.
lyrata]
gi|297320152|gb|EFH50574.1| hypothetical protein ARALYDRAFT_489493 [Arabidopsis lyrata subsp.
lyrata]
Length = 448
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 12/139 (8%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------LERG--- 225
+HL G+++R +LL IKPV+VFDG P+LK+Q ++ R +E G
Sbjct: 63 SHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKE 122
Query: 226 ---KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
K ++ +T+Q + + + LL+L GVP + A EAEAQCA+L GV ++D D
Sbjct: 123 DIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDMD 182
Query: 283 IWLFGARTVYKNFFDKKSH 301
FGA ++ D S
Sbjct: 183 SLTFGAPKFLRHLMDPSSR 201
>gi|226288989|gb|EEH44501.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 566
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 22/145 (15%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGG-VPQLKKQTI 210
D+SIWL Q G GG+ N + L++R+ +L F + P+FV+DG PQ K
Sbjct: 38 DISIWLFQAQAGK----GGT--NPEIRTLFYRLVRLKGFPVHPLFVYDGPQRPQYK---- 87
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
R +L+ LA I R +++L++LF P+ +APGEAEA+CA L+
Sbjct: 88 ------RGKLVSRNYGAGDLARII-----RRSKDLIKLFRFPYHIAPGEAEAECARLQTF 136
Query: 271 NHTQGVITDDSDIWLFGARTVYKNF 295
V++DD D +FG+R N+
Sbjct: 137 GAVDAVMSDDVDTIMFGSRVTIMNY 161
>gi|449283444|gb|EMC90086.1| Flap endonuclease 1 [Columba livia]
Length = 382
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK-----KQTISTLEKDRD-QLLLERGKQ 227
+HL+G+++R +++ IKPV+VFDG PQLK K+T E ++ Q E G++
Sbjct: 61 TSHLMGMFYRTIRMVESGIKPVYVFDGKPPQLKSGELAKRTERRAEAEKHLQEAQEAGEE 120
Query: 228 TRLAS------TITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
+ +T+Q + E ++LL L G+P++ APGEAEA CA+L T+D
Sbjct: 121 NNIEKYSKRLVKVTQQHNDECKKLLTLMGIPYLEAPGEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGA 288
D FG+
Sbjct: 181 DCLTFGS 187
>gi|402224833|gb|EJU04895.1| hypothetical protein DACRYDRAFT_104789 [Dacryopinax sp. DJM-731 SS1]
Length = 1334
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 204 QLKKQTISTLEKDRDQLLLERGKQTRLA----STITEQMSREAQELLQLFGVPFIVAPGE 259
++K + I +++++ D+ + +Q R A +T QM + Q +L+LFG+P+ VAP E
Sbjct: 934 EVKGKDIDSMQREIDEEINTLNQQRRAALVASEDVTLQMITQIQNMLRLFGIPYTVAPME 993
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHV 302
AEAQCA L +G+ITDDSD++LFG V+KN F++ V
Sbjct: 994 AEAQCAELVQLGLVEGIITDDSDVFLFGGLRVFKNMFNQSKTV 1036
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 44/67 (65%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q D G + NAH++G RICKLL++ +KPVFVFDGG P LK+
Sbjct: 97 LAIDSSIWIYQFQATMRDKEGRGLVNAHVLGFLRRICKLLYYGVKPVFVFDGGAPALKRV 156
Query: 209 TISTLEK 215
TI+ +K
Sbjct: 157 TITERKK 163
>gi|452840124|gb|EME42062.1| hypothetical protein DOTSEDRAFT_174868 [Dothistroma septosporum
NZE10]
Length = 393
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTL--EKDRDQLLLERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ K Q E K+T
Sbjct: 61 TSHLMGMFYRTLRIVDNGIKPLYVFDGAPPKLKSGELAKRFQRKSEAQADHEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + EAQ LL+L GVPFI+AP EAEAQCA L ++D
Sbjct: 121 EEVEKFSRRTVRVTREHNAEAQRLLKLMGVPFIIAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLTF 185
>gi|327278874|ref|XP_003224185.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like [Anolis
carolinensis]
Length = 515
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERGKQ 227
+HL+G+++R +++ +KPV+VFDG PQLK ++ + R Q E G++
Sbjct: 194 TSHLMGMFYRTIRMVENGLKPVYVFDGKPPQLKSGELAKRIERRTEAEKQLQEAKEAGEE 253
Query: 228 ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
++ +T+Q + E ++LL L G+P++ APGEAEA CA+L N T+D
Sbjct: 254 ENVEKFSKRLVKVTKQHNEECKKLLTLMGIPYVDAPGEAEASCAALVKANKVYAAATEDM 313
Query: 282 DIWLFGA 288
D FG+
Sbjct: 314 DCLTFGS 320
>gi|327310721|ref|YP_004337618.1| flap endonuclease-1 [Thermoproteus uzoniensis 768-20]
gi|326947200|gb|AEA12306.1| flap endonuclease-1 [Thermoproteus uzoniensis 768-20]
Length = 346
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 16/136 (11%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI----STLEKDRDQLLLERG---- 225
+HL GL++R L+ I+PV+VFDG P+LK+ I + EK R+Q+ ER
Sbjct: 59 TSHLNGLFYRTINLVEAGIRPVYVFDGKPPELKRAEIESRRAAKEKAREQM--ERAAAEG 116
Query: 226 ------KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITD 279
K + +T+QM+ +A+ LL G+P++ AP E EAQ A + G +
Sbjct: 117 RAEDVAKYAKRVIYVTDQMAEDAKALLTAMGIPWVQAPSEGEAQAAYMAARGSVWGAGSQ 176
Query: 280 DSDIWLFGARTVYKNF 295
D D LFGA + +N
Sbjct: 177 DYDSLLFGAPRLVRNL 192
>gi|326433004|gb|EGD78574.1| xeroderma pigmentosum group G complementing factor [Salpingoeca sp.
ATCC 50818]
Length = 1980
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 234 ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYK 293
+T M + Q LL+LFG P+++AP EAE+QCA LE GVITDDSD++LFG R VY+
Sbjct: 1167 VTTDMIVDVQHLLRLFGCPYVIAPQEAESQCAQLEQQGLVSGVITDDSDVFLFGGRRVYR 1226
Query: 294 NFFDKKSHVLRYTAPDI 310
+ +K + Y A D+
Sbjct: 1227 HVCSQKKDMQLYLADDL 1243
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIWLHQ+ + + G V NAH+ + RIC+L+ +IKPVFVFDGG P +KKQ
Sbjct: 27 LAVDASIWLHQIVRAMRNDKGELVRNAHIHAMLARICRLIHHRIKPVFVFDGGAPLIKKQ 86
Query: 209 TISTLEKDRDQLL--LERGKQTRLASTITEQMSREA 242
TI+ K + + L +Q L +TI + ++ +A
Sbjct: 87 TIAERSKRQTEGAQSLRARQQQLLLNTIKQSLANKA 122
>gi|290997255|ref|XP_002681197.1| predicted protein [Naegleria gruberi]
gi|317374913|sp|D2V434.1|FEN1_NAEGR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|284094820|gb|EFC48453.1| predicted protein [Naegleria gruberi]
Length = 387
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 69/133 (51%), Gaps = 21/133 (15%)
Query: 170 GSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ----------------TISTL 213
G V N HL GL R K+L + IKP +VFDG PQLK ++
Sbjct: 58 GEVTN-HLQGLLARTTKMLEYGIKPCYVFDGKPPQLKSGELEKRKERQKEAMEQFALAQE 116
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E D +++++ + TR+ T++ S + ++LL+L GVP + APGEAEAQCA L G
Sbjct: 117 EGDEEKMVMWNKRTTRM----TKEQSNDGKKLLRLMGVPVVEAPGEAEAQCAELCKGGLV 172
Query: 274 QGVITDDSDIWLF 286
T+D D +
Sbjct: 173 YATATEDMDALTY 185
>gi|83286314|ref|XP_730108.1| Flap endonuclease-1 [Plasmodium yoelii yoelii 17XNL]
gi|74882336|sp|Q7RME3.1|FEN1_PLAYO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|23489735|gb|EAA21673.1| flap endonuclease-1-related [Plasmodium yoelii yoelii]
Length = 480
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 152 DVSIWLHQLTKGTHD-------LAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S+ L+Q D + +H+ GL R KL+ +KP++VFDG P+
Sbjct: 34 DASMSLYQFIIAIRDGDQYGNLMNESGETTSHISGLMSRTIKLMENGLKPIYVFDGAPPE 93
Query: 205 LKKQTISTLEKDR---DQLLL---------ERGKQTRLASTITEQMSREAQELLQLFGVP 252
LK + + R ++LL+ E KQ+ +T++ + EA++LL L G+P
Sbjct: 94 LKGSELEKRGEKRQKAEELLIKAKAEGNLEEIKKQSGRTVRVTKKQNEEAKKLLTLMGIP 153
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
I +P EAEAQCA L T+D+D +FG + + +N
Sbjct: 154 VIESPCEAEAQCAFLTKYEMAHATATEDADALVFGTKILIRNL 196
>gi|313246225|emb|CBY35158.1| unnamed protein product [Oikopleura dioica]
Length = 846
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 45/67 (67%)
Query: 229 RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
++ S ++Q+ ++A E+L LFG APGEAEAQCA E+ N TQG ITDD D +LFG
Sbjct: 608 KITSVPSQQLYKDAAEMLTLFGCGVFFAPGEAEAQCAEFEMTNITQGTITDDGDTFLFGG 667
Query: 289 RTVYKNF 295
RTV K
Sbjct: 668 RTVIKGL 674
>gi|392885946|ref|NP_491891.2| Protein XPG-1 [Caenorhabditis elegans]
gi|351063324|emb|CCD71482.1| Protein XPG-1 [Caenorhabditis elegans]
Length = 820
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 235 TEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKN 294
T ++ R+ QE L G+P+I +PGEAEAQC LE GV++DDSD+W FGA+ VY++
Sbjct: 465 TPELYRDLQEFLTNAGIPWIESPGEAEAQCVELERLGLVDGVVSDDSDVWAFGAQHVYRH 524
Query: 295 FFDKKSHVLRY 305
F K V RY
Sbjct: 525 MFSKNRRVQRY 535
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGS-VPNAHLIGLYHRICKLLFFKIKPVFVFDG-GVPQLK 206
L DVSIW++Q LA S P HL L +R+ KLLF+KI+PVFVFDG VP LK
Sbjct: 27 LAIDVSIWIYQAQ-----LAYPSDQPFPHLRLLVNRLSKLLFYKIRPVFVFDGPQVPPLK 81
Query: 207 KQTISTLEKDR 217
+Q + + R
Sbjct: 82 RQVLEARRQKR 92
>gi|73852488|ref|YP_293772.1| putative endonuclease [Emiliania huxleyi virus 86]
gi|72415204|emb|CAI65441.1| putative endonuclease [Emiliania huxleyi virus 86]
gi|347481843|gb|AEO97829.1| flap endonuclease-1 [Emiliania huxleyi virus 84]
gi|347600467|gb|AEP14954.1| endonuclease [Emiliania huxleyi virus 88]
Length = 358
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 155 IWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLE 214
I + Q G G V +HL G+++R +L+ IKPV+VFDG P LKK+ +
Sbjct: 44 IAIRQGPSGQLAACEGEV-TSHLTGIFYRTIRLIEAGIKPVYVFDGKPPVLKKKELDKRN 102
Query: 215 KDRDQLL---------LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCA 265
+ + Q L E KQ + + T + S E +++L L G+P + AP EAEA CA
Sbjct: 103 ERQAQALSELKLTDDATEVEKQEKRSVRATREHSEEVKKMLTLMGIPVVQAPCEAEATCA 162
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVYKNFFD---KKSHVLRYTAPDI 310
+ T+D D FG+ V ++ KK + Y+ P+I
Sbjct: 163 AYVKTGKAYATATEDMDSLTFGSTYVIRHINSTDQKKQPTVEYSLPNI 210
>gi|356575281|ref|XP_003555770.1| PREDICTED: flap endonuclease 1-like [Glycine max]
Length = 382
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 87/181 (48%), Gaps = 23/181 (12%)
Query: 152 DVSIWLHQL-----TKGTHDLA--GGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S+ ++Q GT L G V +HL G++ R +LL IKPV+VFDG P
Sbjct: 34 DASMSIYQFLIVVGRSGTEMLTNEAGEV-TSHLQGMFSRTIRLLEAGIKPVYVFDGKPPD 92
Query: 205 LKKQTISTLEKDRDQLL------LERG------KQTRLASTITEQMSREAQELLQLFGVP 252
LKKQ ++ R + LE K ++ +T+Q + + + LL+L GVP
Sbjct: 93 LKKQELAKRYSKRAEATEDLSEALETANKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVP 152
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFD---KKSHVLRYTAPD 309
+ AP EAEAQCA+L V ++D D FG+ ++ D KK V+ +
Sbjct: 153 VVEAPSEAEAQCAALCKAGKVYAVASEDMDSLTFGSPKFLRHLMDPSSKKIPVMEFEVAK 212
Query: 310 I 310
I
Sbjct: 213 I 213
>gi|341882846|gb|EGT38781.1| hypothetical protein CAEBREN_21263 [Caenorhabditis brenneri]
Length = 809
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%)
Query: 235 TEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKN 294
T ++ R+ QE L G+P+I APGEAEAQC LE GV++DDSD+W FG + VY++
Sbjct: 445 TPELYRDLQEFLTNAGIPWIEAPGEAEAQCVELERLGLVDGVVSDDSDVWAFGVKHVYRH 504
Query: 295 FFDKKSHVLRY 305
F K V RY
Sbjct: 505 MFSKNRKVQRY 515
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGS-VPNAHLIGLYHRICKLLFFKIKPVFVFDG-GVPQLK 206
L DVSIW++Q LA S P HL L +R+ KLLF+KI+PVFVFDG VP LK
Sbjct: 27 LAIDVSIWIYQAQ-----LAYPSDQPFPHLRLLVNRLSKLLFYKIRPVFVFDGPQVPALK 81
Query: 207 KQTISTLEKDR---DQLLLERGKQTRL 230
+Q + + + D +L R K +L
Sbjct: 82 RQVLEARRQKKQNDDDVLTNRKKMGKL 108
>gi|312137188|ref|YP_004004525.1| flap endonuclease 1 [Methanothermus fervidus DSM 2088]
gi|311224907|gb|ADP77763.1| flap endonuclease 1 [Methanothermus fervidus DSM 2088]
Length = 327
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 77/165 (46%), Gaps = 24/165 (14%)
Query: 152 DVSIWLHQLTKGTHDLAG-------GSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S W++Q G G V +HL+G+ HR L+ IKPV+VFDG
Sbjct: 27 DASNWIYQFLSSIRQRDGTPLMDRKGRV-TSHLVGILHRTSALVENNIKPVYVFDGKSLA 85
Query: 205 LKKQTISTLEKDRDQLLLERG--------------KQTRLASTITEQMSREAQELLQLFG 250
LK +TIS E+ R +L E+ K AS I++++ ++ELL G
Sbjct: 86 LKSETIS--ERTRMRLEAEKRWKEALKKKDLEKARKYASRASRISKEIIESSKELLDAMG 143
Query: 251 VPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
+P+I AP E EAQ L V + D D LFGA V +N
Sbjct: 144 IPYIQAPNEGEAQAVYLVKNGDAWAVASQDYDCLLFGAPRVIRNL 188
>gi|38488751|ref|NP_942115.1| flap endonuclease 1 [Danio rerio]
gi|29436437|gb|AAH49413.1| Flap structure-specific endonuclease 1 [Danio rerio]
Length = 330
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLL---ERGKQ 227
+HL+G+++R ++L IKPV+VFDG PQLK + + R ++LL E G+Q
Sbjct: 61 TSHLMGMFYRTIRMLESGIKPVYVFDGKPPQLKSGELEKRVERRAEAEKLLAQAQEAGEQ 120
Query: 228 ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
++ +T+Q + E ++LL L GVP+I AP EAEA CA+L T+D
Sbjct: 121 ENIDKFSKRLVKVTKQHNEECKKLLSLMGVPYIEAPCEAEASCAALVKAGKVYATATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG + ++
Sbjct: 181 DGLTFGTTVLLRHL 194
>gi|367031946|ref|XP_003665256.1| hypothetical protein MYCTH_2308790 [Myceliophthora thermophila ATCC
42464]
gi|347012527|gb|AEO60011.1| hypothetical protein MYCTH_2308790 [Myceliophthora thermophila ATCC
42464]
Length = 395
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ + + + LE K+T
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELARRFQRKQEATEGLEEAKETGTS 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T++ + E Q LL+L GVP+IVAP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVTKEHNAECQRLLKLMGVPYIVAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLFGA 288
D F A
Sbjct: 181 DTLCFDA 187
>gi|224136982|ref|XP_002322464.1| predicted protein [Populus trichocarpa]
gi|222869460|gb|EEF06591.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 8/166 (4%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S W+ QL G ++ L+HR+ L+ +FV DG +P +K T
Sbjct: 30 DLSCWMVQLQNVNKTHCGLVKDKPYIRNLFHRLRALIALNCSLIFVADGSIPAIKLATYR 89
Query: 212 -----TLEKDRDQLLLERGKQTR--LASTITEQMSREAQELLQLFGVPFIVAPGEAEAQC 264
LE +D+ ++ R + S + M +EA+++ G+P + + EAEAQC
Sbjct: 90 RRLNLGLEVTQDETNSQKACSLRRNMGSEFS-CMIKEAKDIGLALGIPCLDSIEEAEAQC 148
Query: 265 ASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
A L + G + DSD++LFGARTVY++ + HV+ Y ++
Sbjct: 149 ALLNTESLCDGCFSSDSDVFLFGARTVYRDICLGEGHVVCYEMEEV 194
>gi|195376315|ref|XP_002046942.1| GJ12207 [Drosophila virilis]
gi|194154100|gb|EDW69284.1| GJ12207 [Drosophila virilis]
Length = 747
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 138 CNIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFV 197
C + K+ +DL V L+ + H P HL L+ R C L++ ++ PVFV
Sbjct: 20 CELRGKKVAIDLAGWVCESLNVVDYFVH-------PRHHLKNLFFRTCYLIWEQVTPVFV 72
Query: 198 FDGGVPQLKKQTISTLE---------KDRDQLLLERGKQTR-LASTITEQMSREAQELLQ 247
+G P+LK Q I+ KD+D + + T + ++ + LL
Sbjct: 73 LEGVAPKLKSQVIAKRNELQFRGVRPKDKDAPAPTQAAAKKDKGRTRFNHVLKQCENLLL 132
Query: 248 LFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
G+ + PGEAEA CA L GVI+ DSD + +GA VY+NF
Sbjct: 133 AMGIQCVQGPGEAEAYCAYLNKHGLVDGVISQDSDCFAYGAVRVYRNF 180
>gi|341885112|gb|EGT41047.1| hypothetical protein CAEBREN_21721 [Caenorhabditis brenneri]
Length = 833
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%)
Query: 235 TEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKN 294
T ++ R+ QE L G+P+I APGEAEAQC LE GV++DDSD+W FG + VY++
Sbjct: 472 TPELYRDLQEFLTNAGIPWIEAPGEAEAQCVELERLGLVDGVVSDDSDVWAFGVKHVYRH 531
Query: 295 FFDKKSHVLRY 305
F K V RY
Sbjct: 532 MFSKNRKVQRY 542
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGS-VPNAHLIGLYHRICKLLFFKIKPVFVFDG-GVPQLK 206
L DVSIW++Q LA S P HL L +R+ KLLF+KI+PVFVFDG VP LK
Sbjct: 27 LAIDVSIWIYQAQ-----LAYPSDQPFPHLRLLVNRLSKLLFYKIRPVFVFDGPQVPALK 81
Query: 207 KQTISTLEKDR---DQLLLERGKQTRL 230
+Q + + + D +L R K +L
Sbjct: 82 RQVLEARRQKKQNDDDVLTNRKKMGKL 108
>gi|410909029|ref|XP_003967993.1| PREDICTED: flap endonuclease 1-like [Takifugu rubripes]
Length = 380
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLL---ERGKQ 227
+HL+G+++R ++L IKPV+VFDG PQLK + + R ++LL E G+Q
Sbjct: 61 TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSSELEKRGEKRAEAEKLLAQAQETGEQ 120
Query: 228 TRLAS------TITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
+ +T+Q S E ++LL L GVP+I AP EAEA CA+L T+D
Sbjct: 121 ENIEKFSKRLVKVTKQHSDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG + ++
Sbjct: 181 DGLTFGTNVLLRHL 194
>gi|18312112|ref|NP_558779.1| flap endonuclease-1 [Pyrobaculum aerophilum str. IM2]
gi|28380018|sp|Q8ZYN2.1|FEN_PYRAE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|18159543|gb|AAL62961.1| DNA endonuclease rad2 homolog [Pyrobaculum aerophilum str. IM2]
Length = 346
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLER--------- 224
+HL GL++R LL I+PV+VFDG P+ K I K R++ + E
Sbjct: 59 TSHLSGLFYRTINLLEAGIRPVYVFDGKPPEFKLAEIEERRKTREKAMEEVLRAIKEGRR 118
Query: 225 ---GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K + A IT +M EA+ LL GVP++ AP E EAQ A + H V + D
Sbjct: 119 EDVAKYAKRAVFITSEMVDEAKRLLSYMGVPWVQAPSEGEAQAAYMARKGHCWAVGSQDY 178
Query: 282 DIWLFGARTVYKNF 295
D LFG+ + +N
Sbjct: 179 DSLLFGSPKLVRNL 192
>gi|254567327|ref|XP_002490774.1| 5' to 3' exonuclease, 5' flap endonuclease [Komagataella pastoris
GS115]
gi|317376166|sp|C4QZ20.1|FEN1_PICPG RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|238030570|emb|CAY68494.1| 5' to 3' exonuclease, 5' flap endonuclease [Komagataella pastoris
GS115]
gi|328351158|emb|CCA37558.1| flap endonuclease-1 [Komagataella pastoris CBS 7435]
Length = 373
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 129 DQHSMLEFRCNIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYH 182
++HS FR + + D S+ L+Q G + N +HL+G ++
Sbjct: 11 NEHSPKAFRNGEMKTFFGRKVAIDASMCLYQFLIAVRQQDGQQLANEEGETTSHLMGFFY 70
Query: 183 RICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLER------------GKQTRL 230
R +++ + IKP +VFDG P LK + K R++ +R K R
Sbjct: 71 RTIRMVGYGIKPCYVFDGKPPVLKGGELEKRLKRREEAEKQRLDMKETGTLADIAKFERR 130
Query: 231 ASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
+T + + +A++LL+L G+P++ AP EAEAQCA L G ++D D +
Sbjct: 131 TVRVTREQNDQAKKLLELMGIPYVDAPCEAEAQCAELAKGGKVYAAASEDMDTLCY 186
>gi|307212664|gb|EFN88367.1| Flap endonuclease GEN [Harpegnathos saltator]
Length = 741
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 176 HLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLASTIT 235
+L LY R LL I PVFV +G P +K +TI R ER + +
Sbjct: 51 YLRNLYFRTAFLLMHGISPVFVLEGKAPDIKHKTIIRRHNVR-HGFCERKTSKKGGRSQF 109
Query: 236 EQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
++ E +++L+ G+ I + GEAEA CA L G I+ DSD +L+GAR VY+NF
Sbjct: 110 NRILTECKQMLEYMGITCIQSHGEAEAMCAYLNEDGLVDGCISQDSDCFLYGARIVYRNF 169
>gi|299742153|ref|XP_001832288.2| exodeoxyribonuclease 1 [Coprinopsis cinerea okayama7#130]
gi|298405054|gb|EAU89661.2| exodeoxyribonuclease 1 [Coprinopsis cinerea okayama7#130]
Length = 895
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%), Gaps = 13/157 (8%)
Query: 152 DVSIWLHQ-LTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
D +WLH+ + DLA G ++ R+ L FKI+P VFDGG KK T
Sbjct: 30 DAYVWLHKGVYSCATDLALGKSTTRYVNYAMDRVHMLRHFKIEPYIVFDGGPLPAKKGTE 89
Query: 211 STLEKDRDQ------LLLERGKQTRLAST------ITEQMSREAQELLQLFGVPFIVAPG 258
S +K R++ L+ +G+ T+ +T QM+ + + L+ GV ++VAP
Sbjct: 90 SERKKKREENLAKGKALVAQGRHTQARDCFNKCIDVTPQMAYQLIKKLRAEGVQYLVAPY 149
Query: 259 EAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
EA+AQ A LE G++T+DSD+ +FG ++V+ F
Sbjct: 150 EADAQLAYLERIGLVDGILTEDSDLLVFGCKSVFFKF 186
>gi|449016220|dbj|BAM79622.1| probable flap structure-specific endonuclease 1 [Cyanidioschyzon
merolae strain 10D]
Length = 380
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ ++Q ++ N +HL G+++R KLL IKP++VFDG P L
Sbjct: 34 DASMCIYQFLVAVRTADAANLTNESGEITSHLSGVFYRTIKLLELGIKPIYVFDGKAPDL 93
Query: 206 KKQTIS-----------TLEKDRDQLLLE-RGKQTRLASTITEQMSREAQELLQLFGVPF 253
K ++ K R++ LE K R + ++ + + LL+L G+P
Sbjct: 94 KANELAKRRSRREEDEQAAAKAREEGDLELYAKYARRVNKVSAETIDNVKRLLRLMGIPV 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFF 296
+ AP EAEAQCA L ++D D FG + +N F
Sbjct: 154 VEAPSEAEAQCAVLTRAGLAYATASEDMDALTFGTPLLIRNLF 196
>gi|452822684|gb|EME29701.1| flap endonuclease-1 [Galdieria sulphuraria]
Length = 377
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 139 NIVINKLLVDLISDVSIWLHQLTKGTHDL--AGGSVPNAHLIGLYHRICKLLFFKIKPVF 196
N K+ +D ++ +L + G +L G V +HL GL++R +L+ I P +
Sbjct: 25 NYFGRKIAIDASMNIYQFLSAVRAGADNLRNEAGEV-TSHLSGLFYRTTRLMELGIMPCY 83
Query: 197 VFDGGVPQLKKQTISTLEKDRDQ------LLLERG------KQTRLASTITEQMSREAQE 244
VFDG P+LK +S + R Q L E G K R + ++ ++ +++
Sbjct: 84 VFDGKPPELKSGELSKRIEARRQAEASAALAKEEGDVEAYEKFNRRVNKVSPEVIEQSKR 143
Query: 245 LLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFF 296
LL+L G+P + AP EAEAQCASL N ++D D FG+ V + +
Sbjct: 144 LLRLMGIPILEAPEEAEAQCASLCKENLVYATASEDMDSLTFGSSKVIRQLW 195
>gi|167536429|ref|XP_001749886.1| hypothetical protein [Monosiga brevicollis MX1]
gi|317374912|sp|A9VB27.1|FEN1_MONBE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|163771601|gb|EDQ85265.1| predicted protein [Monosiga brevicollis MX1]
Length = 368
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ ++Q ++G++ + +HL GL++R +++ IKP++VFDG P +K
Sbjct: 34 DASMSIYQFLIAIRSEGSNLVNEAGEATSHLSGLFYRTIRMVNHGIKPLYVFDGKPPTMK 93
Query: 207 -----------KQTISTLEKDRDQLLLERGKQ-TRLASTITEQMSREAQELLQLFGVPFI 254
K+ + LE+ +Q E+ ++ +R +T + + + ++LL L G+PFI
Sbjct: 94 SGELLKRGARRKEAQANLEEATEQGDTEQMEKFSRRLVHVTREHNEQCRQLLTLMGIPFI 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
+AP EAEAQCA L G T+D D FG + ++
Sbjct: 154 IAPTEAEAQCAELVKGGKVFATATEDMDALTFGTTVLLRHM 194
>gi|401409161|ref|XP_003884029.1| putative RAD2 endonuclease [Neospora caninum Liverpool]
gi|325118446|emb|CBZ53997.1| putative RAD2 endonuclease [Neospora caninum Liverpool]
Length = 1924
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%)
Query: 232 STITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTV 291
+TE+M + LL+ FGVPF+ APGEAEA A N VI+DDSD +FGAR +
Sbjct: 1425 GNVTERMKDQVVALLRAFGVPFVTAPGEAEATAAYFTAQNLADAVISDDSDALVFGAREI 1484
Query: 292 YKNFFDKKSHVLRYTA 307
Y+NFF+ K V Y A
Sbjct: 1485 YRNFFENKKSVEMYEA 1500
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 15/124 (12%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D +IWL Q G +P AHL+G ++R+C+LLFF+I+P+ VFDG P LK+QT+
Sbjct: 30 DAAIWLVQFLHAMKLPDGSPMPAAHLVGFFNRLCRLLFFEIRPIIVFDGPPPFLKRQTLL 89
Query: 212 TLEKDRDQ-----------LLLERGKQTRL----ASTITEQMSREAQELLQLFGVPFIVA 256
++ R Q LLL R K+ R + T+ + +A + +P
Sbjct: 90 ARKRQRQQQEKNLRSVVARLLLNRLKEKRRQEQEGAATTQDTASQAPGPHDIVSIPDTPT 149
Query: 257 PGEA 260
P A
Sbjct: 150 PSSA 153
>gi|412993680|emb|CCO14191.1| predicted protein [Bathycoccus prasinos]
Length = 390
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ------LLLERG-- 225
AHLIG+ R C++L IKPV+VFDG P LK ++ + RDQ + E G
Sbjct: 62 TAHLIGVLSRTCRMLEAGIKPVYVFDGKPPTLKGGELAKRKDKRDQAEKDLEVARETGDK 121
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K + ++++ ++E L++L GVP AP EAEA CA++ G T+D
Sbjct: 122 DAIEKAAKRTVRVSKEQNQEVMRLVKLLGVPVFEAPCEAEATCAAMCKAGLVHGAATEDM 181
Query: 282 DIWLFGARTVYKNFF 296
D F + +N
Sbjct: 182 DTLTFACPRLIRNLM 196
>gi|226529749|ref|NP_001149363.1| XPG I-region family protein [Zea mays]
gi|224029981|gb|ACN34066.1| unknown [Zea mays]
gi|413941545|gb|AFW74194.1| XPG I-region family protein [Zea mays]
Length = 688
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 82/173 (47%), Gaps = 19/173 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI- 210
D+S WL Q A +L L+HRI L+ +FV DG +P +K T
Sbjct: 30 DLSCWLVQFCSANRSPAF-LRDKVYLKNLFHRIRALIALNCSLIFVSDGAIPSVKLATYR 88
Query: 211 ---------STLEKDRDQLL--LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGE 259
+T E+ Q L L R K + + +M +EA+ L G+P + E
Sbjct: 89 RRLGLNAAEATREEANSQPLTSLRRNKSSEFS-----RMIKEAKHLGLALGIPCLDGMEE 143
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKN-FFDKKSHVLRYTAPDIR 311
AEAQCA L + G T DSD +LFGA+TVY++ F + +V+ Y DI+
Sbjct: 144 AEAQCALLNFSSLCDGCFTSDSDSFLFGAKTVYRDVFIGEGGYVICYEMEDIQ 196
>gi|194750279|ref|XP_001957555.1| GF10471 [Drosophila ananassae]
gi|190624837|gb|EDV40361.1| GF10471 [Drosophila ananassae]
Length = 734
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 21/139 (15%)
Query: 173 PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAS 232
P HL L+ R C L++ ++ PVFV +G P+LK Q I+ R++L RG + + A+
Sbjct: 48 PRHHLKNLFFRTCYLIWEQVTPVFVLEGVAPKLKSQVIAK----RNELQF-RGVKPKEAT 102
Query: 233 TITEQMS----------------REAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGV 276
++ S ++ + LL G+ + PGEAEA CA L GV
Sbjct: 103 AGSQTQSQAPKAEKGRTRFNHVLKQCENLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGV 162
Query: 277 ITDDSDIWLFGARTVYKNF 295
I+ DSD + +GA VY+NF
Sbjct: 163 ISQDSDCFAYGAVRVYRNF 181
>gi|164426998|ref|XP_001728355.1| DNA-repair protein rad2 [Neurospora crassa OR74A]
gi|157071561|gb|EDO65264.1| DNA-repair protein rad2 [Neurospora crassa OR74A]
Length = 396
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ + + + LE K+T
Sbjct: 63 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGTA 122
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q+LL+L G+P+IVAP EAEAQCA L ++D
Sbjct: 123 EDVEKFSRRTVRVTREHNAECQKLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASEDM 182
Query: 282 DIWLFGA 288
D F A
Sbjct: 183 DTLCFNA 189
>gi|383320867|ref|YP_005381708.1| flap endonuclease 1 [Methanocella conradii HZ254]
gi|379322237|gb|AFD01190.1| flap endonuclease 1 [Methanocella conradii HZ254]
Length = 339
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 70/132 (53%), Gaps = 11/132 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERG-- 225
+HL G+ +R+ L+ IKPVFVFDG P LK +TI + R+ + +E G
Sbjct: 55 TSHLSGIIYRVTNLIELGIKPVFVFDGKPPLLKAETIKARAEVREAARQMYEAAVEEGSA 114
Query: 226 ---KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
K + A++I Q+ +++ LL G+PFIVAP E EAQ + + V + D D
Sbjct: 115 EAYKYAQAATSINAQIIEDSKTLLGYMGIPFIVAPSEGEAQASCMVSKGAADYVGSQDYD 174
Query: 283 IWLFGARTVYKN 294
LFGA + +N
Sbjct: 175 SLLFGAPRMVRN 186
>gi|317374923|sp|A7UW97.2|FEN1_NEUCR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 394
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ + + + LE K+T
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q+LL+L G+P+IVAP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNAECQKLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLFGA 288
D F A
Sbjct: 181 DTLCFNA 187
>gi|429854713|gb|ELA29705.1| DNA-repair protein rad2 [Colletotrichum gloeosporioides Nara gc5]
Length = 394
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTL--EKDRDQLLLERGKQT--- 228
+HL+GL++R +++ IKP++VFDG P+LK ++ K LE K+T
Sbjct: 61 TSHLMGLFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEANENLEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q LL+L G+PFIVAP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNAECQRLLKLMGIPFIVAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLTF 185
>gi|350287839|gb|EGZ69075.1| DNA-repair protein rad2, partial [Neurospora tetrasperma FGSC 2509]
Length = 390
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ + + + LE K+T
Sbjct: 57 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGTA 116
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q LL+L G+P+IVAP EAEAQCA L ++D
Sbjct: 117 EDVEKFSRRTVRVTREHNAECQRLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASEDM 176
Query: 282 DIWLFGA 288
D F A
Sbjct: 177 DTLCFNA 183
>gi|406860923|gb|EKD13979.1| hypothetical protein MBM_07656 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1010
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 77/147 (52%), Gaps = 24/147 (16%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIW Q+ G GGS N + LY+R+ +LL I+P+FVFDG PQ
Sbjct: 35 LAIDISIWQFQIQSGQ----GGS--NPAIRTLYYRLIRLLSLSIQPLFVFDG--PQ---- 82
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
R QL +R K+ M+ A++LL+LFG P APGEAEA+CA L+
Sbjct: 83 --------RPQL--KRNKRVGRGGASASDMA--AKQLLKLFGFPCHNAPGEAEAECALLQ 130
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNF 295
V+++D D +FG+ +++
Sbjct: 131 RKGIVDAVLSEDVDTLMFGSGITLRDW 157
>gi|336467513|gb|EGO55677.1| DNA-repair protein rad2 [Neurospora tetrasperma FGSC 2508]
Length = 396
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ + + + LE K+T
Sbjct: 63 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGTA 122
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q LL+L G+P+IVAP EAEAQCA L ++D
Sbjct: 123 EDVEKFSRRTVRVTREHNAECQRLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASEDM 182
Query: 282 DIWLFGA 288
D F A
Sbjct: 183 DTLCFNA 189
>gi|268568094|ref|XP_002640157.1| C. briggsae CBR-XPG-1 protein [Caenorhabditis briggsae]
Length = 886
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%)
Query: 235 TEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKN 294
T ++ R+ QE L G+P+I APGEAEAQC LE GV++DDSD+W FG + VY++
Sbjct: 468 TPELYRDLQEFLTNAGIPWIEAPGEAEAQCVELEKLGLVDGVVSDDSDVWAFGVKHVYRH 527
Query: 295 FFDKKSHVLRY 305
F K V RY
Sbjct: 528 MFAKNRRVQRY 538
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGS-VPNAHLIGLYHRICKLLFFKIKPVFVFDG-GVPQLK 206
L DVSIW++Q LA S P HL L +R+ KLLF+KI+PVFVFDG VP LK
Sbjct: 27 LAIDVSIWIYQAQ-----LAYPSDQPFPHLRLLVNRLSKLLFYKIRPVFVFDGPQVPVLK 81
Query: 207 KQTISTLEKDR 217
+Q + + + R
Sbjct: 82 RQVLESRRQKR 92
>gi|375083121|ref|ZP_09730153.1| flap endonuclease-1 [Thermococcus litoralis DSM 5473]
gi|374742207|gb|EHR78613.1| flap endonuclease-1 [Thermococcus litoralis DSM 5473]
Length = 340
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Query: 139 NIVINKLLVDLISDVSIWLHQLTK--GTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVF 196
N+ K+ +D + + +L + + GT + +HL GL++R L+ IKP +
Sbjct: 18 NLNGRKVAIDAFNAIYQFLSTIRQRDGTPLMDSKGRITSHLSGLFYRTINLMEAGIKPAY 77
Query: 197 VFDGGVPQLKKQTISTLEKDRDQL------LLERG------KQTRLASTITEQMSREAQE 244
VFDG P+ KK+ + + R++ L RG K + AS + E + +A++
Sbjct: 78 VFDGKPPEFKKKELEKRAEAREEAQEKWEEALARGDLEEAKKYAQRASKVNEMLIEDAKK 137
Query: 245 LLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
LL+L G+P++ AP E EAQ A + H + D D LFG + +N
Sbjct: 138 LLELMGIPWVQAPSEGEAQAAYMASKGHVWASASQDYDSLLFGTPRLVRNL 188
>gi|342882941|gb|EGU83505.1| hypothetical protein FOXB_05915 [Fusarium oxysporum Fo5176]
Length = 395
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQTRLA 231
+HL+G+++R +++ IKP++VFDG P+LK ++ + + + LE K+T A
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGTA 120
Query: 232 STI----------TEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
I T + + E Q LL+L G+P+I+AP EAEAQCA L ++D
Sbjct: 121 EDIEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLAQAGKVYAAASEDM 180
Query: 282 DIWLFGA 288
D F A
Sbjct: 181 DTLCFNA 187
>gi|320202935|ref|NP_001188509.1| flap endonuclease-1 [Bombyx mori]
gi|268044461|gb|ACY92094.1| flap endonuclease-1 [Bombyx mori]
Length = 380
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 79/154 (51%), Gaps = 17/154 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q ++G ++ +HL+G ++R +L+ IKPV+VFDG P +K
Sbjct: 34 DASMSLYQFLIAVRSEGAQLVSVDGETTSHLMGTFYRTIRLVENGIKPVYVFDGKPPDMK 93
Query: 207 KQTISTLEKDRDQLLLERGKQTRLAST------------ITEQMSREAQELLQLFGVPFI 254
++ + R++ E K T T +T+Q S EA++LL+L GVP +
Sbjct: 94 AHQLNKRAERREEAEKELQKATEAGDTASVDKFNRRLVKVTKQRSEEAKQLLKLMGVPVV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
AP EAEAQCA+L T+D D FGA
Sbjct: 154 DAPCEAEAQCAALVKSGKVFAAATEDMDALTFGA 187
>gi|195587930|ref|XP_002083714.1| GD13208 [Drosophila simulans]
gi|194195723|gb|EDX09299.1| GD13208 [Drosophila simulans]
Length = 726
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 173 PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAS 232
P HL L+ R C L++ ++ PVFV +G P+LK Q I+ R++L RG + + +
Sbjct: 48 PRHHLKNLFFRTCYLIWEQVTPVFVLEGVAPKLKSQVIAK----RNELQF-RGVKPKNSP 102
Query: 233 TITEQMS--------------REAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
T+ + ++ + LL G+ + PGEAEA CA L GVI+
Sbjct: 103 ECTQSQAPKGDKGRSRFNHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVIS 162
Query: 279 DDSDIWLFGARTVYKNF 295
DSD + +GA VY+NF
Sbjct: 163 QDSDCFAYGAVRVYRNF 179
>gi|156093896|ref|XP_001612986.1| DNA repair endonuclease [Plasmodium vivax Sal-1]
gi|148801860|gb|EDL43259.1| DNA repair endonuclease, putative [Plasmodium vivax]
Length = 1473
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 58/91 (63%)
Query: 215 KDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQ 274
++ + L+ E K + I E+M+ + + LL +FG+P++ +P EAEAQC+ L N+
Sbjct: 1111 RENEHLMKEYKKLKKNNIEINEEMNEDIKILLNMFGIPYVQSPCEAEAQCSYLNCKNYCD 1170
Query: 275 GVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+I+DDSD+ +F +TV KNFF++K V Y
Sbjct: 1171 AIISDDSDVLVFNGKTVIKNFFNRKKTVEVY 1201
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 28/87 (32%)
Query: 152 DVSIWLHQLTKGTH--DLAGGSVPN--------------------------AHLIGLYHR 183
DVSIWL++LT + L G+V N HL + R
Sbjct: 30 DVSIWLYELTYANNLKVLRNGAVDNMSIFNDLWMDFSEQMNTDMRTDNLKKVHLYFFFLR 89
Query: 184 ICKLLFFKIKPVFVFDGGVPQLKKQTI 210
ICKLL++ I+P+F+FDG P+LK++TI
Sbjct: 90 ICKLLYYNIRPIFIFDGTPPELKRKTI 116
>gi|320165003|gb|EFW41902.1| flap endonuclease 1-B [Capsaspora owczarzaki ATCC 30864]
Length = 388
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 17/161 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ ++Q ++G + +HL+G ++R ++L IKPV+VFDG P +K
Sbjct: 34 DASMSMYQFLIAVRSEGNQLMNDAGETTSHLVGFFYRTIRMLENGIKPVYVFDGKPPVMK 93
Query: 207 KQTIS--TLEKDRDQLLLERGKQTRLAST----------ITEQMSREAQELLQLFGVPFI 254
++ T ++ Q L+ + + T +T++ + E + LL L GVP+I
Sbjct: 94 SGELAKRTARREEAQASLDAATEAGESETMEKFQRRLVKVTKEHNEECKRLLTLMGVPYI 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
AP EAEAQCA+L T+D D FG++ + ++
Sbjct: 154 SAPCEAEAQCAALVKSGSVFAAGTEDMDALTFGSKVLLRHL 194
>gi|308473689|ref|XP_003099068.1| CRE-XPG-1 protein [Caenorhabditis remanei]
gi|308267722|gb|EFP11675.1| CRE-XPG-1 protein [Caenorhabditis remanei]
Length = 828
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%)
Query: 235 TEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKN 294
T ++ R+ QE L G+P+I APGEAEAQC LE GV++DDSD+W FG + VY++
Sbjct: 468 TPELYRDLQEFLTNAGIPWIEAPGEAEAQCVELERLGLVDGVVSDDSDVWAFGVKHVYRH 527
Query: 295 FFDKKSHVLRY 305
F K V RY
Sbjct: 528 MFAKNRRVQRY 538
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDG-GVPQLKK 207
L DVSIW++Q P HL L +R+ KLLF+KI+PVFVFDG VP LK+
Sbjct: 27 LAIDVSIWIYQAQLSY----PSDQPFPHLRLLVNRLSKLLFYKIRPVFVFDGPQVPSLKR 82
Query: 208 QTISTL---EKDRDQLLLERGKQTRLASTITEQMSREAQE 244
Q + ++D D +L K +L ++ EA E
Sbjct: 83 QVLEARRQKKQDDDDILKNPKKMGKLKEIAGGKLDNEALE 122
>gi|385304582|gb|EIF48594.1| single-stranded dna cleaves single-stranded dna during nucleotide
excision repair [Dekkera bruxellensis AWRI1499]
Length = 577
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%)
Query: 229 RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
R + ++ M + Q+LL FG+PFI AP EAEAQCA L G++TDDSD +LFG
Sbjct: 357 RDSDEVSTSMILDVQDLLSRFGIPFITAPMEAEAQCAELFGLKLVDGIVTDDSDCFLFGG 416
Query: 289 RTVYKNFFDKKSHVLRYTAPDI 310
+YKN F++K+ V Y DI
Sbjct: 417 SIIYKNMFNEKNFVECYQLEDI 438
>gi|358054307|dbj|GAA99233.1| hypothetical protein E5Q_05927 [Mixia osmundae IAM 14324]
Length = 389
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ ++Q G + N +HL+G ++R +++ IKP +VFDG P L
Sbjct: 34 DASMSIYQFLIAVRQQDGQQLMNESGETTSHLMGFFYRTIRMVENGIKPAYVFDGKPPDL 93
Query: 206 KKQTISTLEKDRDQ------------LLLERGKQTRLASTITEQMSREAQELLQLFGVPF 253
K + R + + E K +R +T++ + E Q LL+L G+PF
Sbjct: 94 KSGVLKKRFAKRAEATEEGEDAKETGTVEEIDKLSRRTVRVTKEHNEECQRLLKLMGIPF 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
I+AP EAEAQCA L G G ++D D F + + ++
Sbjct: 154 IIAPSEAEAQCAELCRGGLVYGTGSEDMDTLTFSSPIILRHL 195
>gi|145514173|ref|XP_001442997.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124467070|sp|A0CXT3.1|FEN11_PARTE RecName: Full=Flap endonuclease 1-1; Short=FEN-1-1; AltName:
Full=Flap structure-specific endonuclease 1-1
gi|124410358|emb|CAK75600.1| unnamed protein product [Paramecium tetraurelia]
Length = 390
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 12/149 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ------LLLERGK- 226
HL+GL++R + L IKPV+VFDG P LK ++ +K +++ L LE+G
Sbjct: 65 TGHLVGLFNRTLQFLENGIKPVWVFDGKPPLLKSGELARRKKLKEEAQVKTELALEQGDM 124
Query: 227 -----QTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
Q + +TI+ M +A ++L+L G P I+AP EAEAQCA L T+D
Sbjct: 125 QQALLQHQRTTTISSVMKEDAIKMLKLMGCPVIIAPCEAEAQCAELCRAGKIYATATEDM 184
Query: 282 DIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
D F + + F KK + D+
Sbjct: 185 DALTFRTPVLLRGFNTKKEPIYEIIYDDM 213
>gi|452981413|gb|EME81173.1| hypothetical protein MYCFIDRAFT_189405 [Pseudocercospora fijiensis
CIRAD86]
Length = 393
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTL--EKDRDQLLLERGKQ---- 227
+HL+G+++R +++ IKPV+VFDG P+LK ++ K Q E K+
Sbjct: 61 TSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFQRKSEAQEAHEDAKEIGTA 120
Query: 228 ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
+R +T + ++EAQ LL+L GVP+I+AP EAEAQCA + ++D
Sbjct: 121 EEVEKFSRRTVRVTREHNQEAQRLLKLMGVPYIIAPTEAEAQCAVIARAGKVYAAASEDM 180
Query: 282 DIWLFGA 288
D F +
Sbjct: 181 DTLTFAS 187
>gi|451853401|gb|EMD66695.1| hypothetical protein COCSADRAFT_35197 [Cochliobolus sativus ND90Pr]
Length = 395
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS------TLEKDRDQLLLERG-- 225
+HL+GL++R +++ IKP++VFDG P+LK ++ T + + E G
Sbjct: 61 TSHLMGLFYRTMRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKTEAQAAAEEAKETGTA 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K +R +T++ + E Q+LL+L G+P+IVAP EAEAQCA+L G ++D
Sbjct: 121 EDVEKFSRRTVRVTKEHNAECQQLLKLMGIPYIVAPTEAEAQCATLAKGGKVYAAASEDM 180
Query: 282 DIWLFGA 288
D F +
Sbjct: 181 DTLTFAS 187
>gi|451854672|gb|EMD67964.1| hypothetical protein COCSADRAFT_187007 [Cochliobolus sativus
ND90Pr]
Length = 934
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 28/163 (17%)
Query: 152 DVSIWLHQL--TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT 209
D SIWL Q+ +KG G N L Y+R+ +L+ I PVFVFDG
Sbjct: 38 DTSIWLFQIQASKGKSSQGGT---NPALRTFYYRLLRLISLAIHPVFVFDGP-------- 86
Query: 210 ISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
++ +R K+T T+ A++LL+ FG P +APGEAEA+CA L+
Sbjct: 87 --------NKPPFKRNKRT--GPTVASIPEFLAKQLLKQFGYPIHLAPGEAEAECALLQR 136
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFFDKKS-----HVLRYTA 307
V+++D D +FG+ +N+ +KS HV Y A
Sbjct: 137 EGIVDAVLSEDVDTLMFGSGVTLRNWSPEKSGKTPTHVNVYDA 179
>gi|400598682|gb|EJP66391.1| DNA-repair protein rad2 [Beauveria bassiana ARSEF 2860]
Length = 394
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTL--EKDRDQLLLERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ K Q LE K+T
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQTAQEGLEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q LL+L G+P+I+AP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLAKAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|347838761|emb|CCD53333.1| similar to flap endonuclease 1 [Botryotinia fuckeliana]
Length = 395
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQTRLA 231
+HL+G+++R +++ IKPV+VFDG P+LK ++ + + LE K+T A
Sbjct: 61 TSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFQRKATATEGLEEAKETGTA 120
Query: 232 STI----------TEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
I T + + E Q LL+L G+P+I+AP EAEAQCA+L ++D
Sbjct: 121 EDIEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAALARAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|242219226|ref|XP_002475395.1| predicted protein [Postia placenta Mad-698-R]
gi|220725414|gb|EED79402.1| predicted protein [Postia placenta Mad-698-R]
Length = 567
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 24/143 (16%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW H T GG P L + R+CKLL F + P+FVFDG
Sbjct: 43 DASIWYHHATFSK----GGENPELRL--FFFRLCKLLEFPLIPLFVFDG----------- 85
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
R++ ++RG ++L + ++ ++LL +G+ + +A GEAEA+ A L
Sbjct: 86 -----RERPKVKRG--SKLGKAGSHNLTARVKQLLDCYGIEWRMARGEAEAELACLNRAG 138
Query: 272 HTQGVITDDSDIWLFGARTVYKN 294
++TDD D +FGARTV KN
Sbjct: 139 VIDAILTDDVDTLVFGARTVIKN 161
>gi|258563548|ref|XP_002582519.1| predicted protein [Uncinocarpus reesii 1704]
gi|237908026|gb|EEP82427.1| predicted protein [Uncinocarpus reesii 1704]
Length = 772
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 34/203 (16%)
Query: 122 MHEMPQNDQHSMLEFRCN-IVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGL 180
+ E+ D+ S+ +F + + V + D SIWL Q+ L N L L
Sbjct: 7 VQELGSGDRISLAKFAIDHLQRTARPVRIAVDASIWLFQVQSAQGGL------NPELRAL 60
Query: 181 YHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSR 240
++R+ +LL I+P+FVFDG P+ E R +L+ G S I R
Sbjct: 61 FYRLARLLALPIQPLFVFDG--PERP-------EYKRGKLIARNG-----GSHIIGSFKR 106
Query: 241 EAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKS 300
L++LFG F APGEAEAQCA L++ +++D D +FG++ NF
Sbjct: 107 ----LIELFGFNFYDAPGEAEAQCAKLQIAGIVDASLSNDIDTLMFGSQVTLLNFSKASP 162
Query: 301 ---------HVLRYTAPDIRYYF 314
+V R+++P+ F
Sbjct: 163 KNSGPATHVNVYRHSSPNANVTF 185
>gi|392564416|gb|EIW57594.1| PIN domain-like protein [Trametes versicolor FP-101664 SS1]
Length = 1244
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 4/105 (3%)
Query: 202 VPQLKKQTISTLEKDRDQLL--LERGKQT--RLASTITEQMSREAQELLQLFGVPFIVAP 257
+ Q+K + I ++ ++ D + L R K+T R + IT+QM + +L+LFG+P+I AP
Sbjct: 798 ISQVKGKDIESVRREIDDEIRDLNRQKKTAMRDSEDITQQMISQIMIMLRLFGIPYITAP 857
Query: 258 GEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHV 302
EAEAQCA+L G+ITDDSD++LFG V KN F++ V
Sbjct: 858 MEAEAQCAALLSFGLVDGIITDDSDVFLFGGGRVLKNMFNQSKTV 902
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 40/60 (66%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q D G + NAH++G RICKLLF+ IKPVFVFDGG P LK TI+
Sbjct: 30 DSSIWIYQFQATMRDKEGRGLVNAHVLGFLRRICKLLFYGIKPVFVFDGGAPALKMSTIA 89
>gi|322708426|gb|EFZ00004.1| DNA-repair protein rad2 [Metarhizium anisopliae ARSEF 23]
Length = 395
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ + + + LE K+T
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q LL+L G+PFI+AP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNAECQRLLKLMGIPFIIAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|409079272|gb|EKM79634.1| hypothetical protein AGABI1DRAFT_114134 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 423
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS------------TLEKDRDQLL 221
+HL+G ++R +++ IKP +VFDG P+LKK +S E +
Sbjct: 62 TSHLMGFFYRTIRIVENGIKPAYVFDGKPPELKKGVLSKRFERREEAKEEGEEAKETGTV 121
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K +R +T++ + E LL+L G+P +VAP EAEAQCA L G ++D
Sbjct: 122 EEVDKLSRRTVKVTKEHNAECIRLLKLMGIPVVVAPSEAEAQCAELARGGKVYAAGSEDM 181
Query: 282 DIWLFGARTVYKNF 295
D F A +Y++
Sbjct: 182 DTLTFNAPILYRHL 195
>gi|118386483|ref|XP_001026360.1| XPG N-terminal domain containing protein [Tetrahymena thermophila]
gi|89308127|gb|EAS06115.1| XPG N-terminal domain containing protein [Tetrahymena thermophila
SB210]
Length = 1113
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 48/66 (72%)
Query: 240 REAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKK 299
++ ++LL LFGVP++ AP EAEAQCA LE G+ITDDSD++LFG + +Y+ F K+
Sbjct: 756 QQVRQLLLLFGVPWVEAPSEAEAQCAFLEQIKLVDGIITDDSDVFLFGGKNIYRGLFGKE 815
Query: 300 SHVLRY 305
+ +RY
Sbjct: 816 ADYVRY 821
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 149 LISDVSIWLHQLTKG-THDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK 207
L DVSIW+ ++ G N HL+G++ R+C+LL IKPVFVFDG P+LK+
Sbjct: 27 LAIDVSIWVIRMLYGFASRRMNSEFKNIHLVGIFKRLCRLLSLGIKPVFVFDGKAPELKR 86
Query: 208 QTISTLEKDRDQ 219
T+ ++ R++
Sbjct: 87 HTLYLRQQQREK 98
>gi|68062082|ref|XP_673044.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56490604|emb|CAI01886.1| hypothetical protein PB300433.00.0 [Plasmodium berghei]
Length = 375
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 20/176 (11%)
Query: 140 IVINKLLVDLIS-DVSIWLHQLTKGTHD-------LAGGSVPNAHLIGLYHRICKLLFFK 191
I I L+ +++ D S+ L+Q D + +H+ GL R KL+
Sbjct: 21 IKIENLMGRVVAIDASMSLYQFIIAIRDGDQYGNLMNESGETTSHISGLMSRTIKLMENG 80
Query: 192 IKPVFVFDGGVPQLKKQTISTLEKDR---DQLLL---ERG------KQTRLASTITEQMS 239
+KP++VFDG P+LK + + R ++LL+ E G KQ+ +T++ +
Sbjct: 81 LKPIYVFDGAPPELKGSELEKRGEKRQKAEELLIKAKEEGNLEEIKKQSGRTVRVTKKQN 140
Query: 240 REAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
EA++LL L G+P I +P EAEAQCA L T+D+D +FG + + +N
Sbjct: 141 EEAKKLLTLMGIPVIESPCEAEAQCAFLTKYEMAHATATEDADALVFGTKILIRNL 196
>gi|347601761|gb|AEP16246.1| flap endonuclease 1 [Emiliania huxleyi virus 208]
Length = 358
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 155 IWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLE 214
I + Q G + G V +HL G+++R +L+ IKPV+VFDG P LKK+ +
Sbjct: 44 IAIRQGPSGQLAASEGEV-TSHLTGIFYRTIRLIEAGIKPVYVFDGKPPVLKKKELDKRN 102
Query: 215 KDRDQLL---------LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCA 265
+ + Q L E KQ + + T + S E +++L L G+P + +P EAEA CA
Sbjct: 103 ERQAQALSELKLTDDATEVEKQEKRSVRATREHSEEVKKMLTLMGIPVVQSPCEAEATCA 162
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVYKNFFD---KKSHVLRYTAPDI 310
+ T+D D FG+ V ++ KK + Y+ P+I
Sbjct: 163 AYVKTGKAYATATEDMDSLTFGSTYVIRHINSTDQKKQPTVEYSLPNI 210
>gi|430813616|emb|CCJ29055.1| unnamed protein product, partial [Pneumocystis jirovecii]
gi|430814535|emb|CCJ28245.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 126
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 43/69 (62%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW++Q K D G + N H+IG + RICKLLFF +KPVFVFDG VP LK+
Sbjct: 27 LAVDASIWIYQFFKAFRDKEGNYISNGHIIGFFRRICKLLFFGVKPVFVFDGNVPFLKQC 86
Query: 209 TISTLEKDR 217
+ + R
Sbjct: 87 VMKKRAEKR 95
>gi|322700750|gb|EFY92503.1| DNA-repair protein rad2 [Metarhizium acridum CQMa 102]
Length = 426
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ + + + LE K+T
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q LL+L G+PFI+AP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNAECQRLLKLMGIPFIIAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|440633913|gb|ELR03832.1| flap endonuclease-1 [Geomyces destructans 20631-21]
Length = 395
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIST--LEKDRDQLLLERGKQT--- 228
+HL+G+++R +++ IKPV+VFDG P+LK ++ K LE K+T
Sbjct: 61 TSHLLGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFARKAEATEGLEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R ++ Q + E Q+LL+L G+P+I+AP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVSRQHNAECQQLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|403414469|emb|CCM01169.1| predicted protein [Fibroporia radiculosa]
Length = 400
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAST- 233
+HL+G ++R +++ IKP++VFDG P++K +S R++ E + +T
Sbjct: 55 SHLMGFFYRTIRMVENGIKPLYVFDGKPPEMKAGVLSKRLARREEAKEEGEEAKETGTTE 114
Query: 234 -----------ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
+T + + E + LL L G+PF+VAP EAEAQCA L G ++D D
Sbjct: 115 DVDRFSRRTVKVTREHNEECRRLLGLMGIPFVVAPSEAEAQCAELARGGKVYAAGSEDMD 174
Query: 283 IWLFGARTVYKNF 295
F A +Y++
Sbjct: 175 TLTFSAPVLYRHL 187
>gi|374632950|ref|ZP_09705317.1| flap structure-specific endonuclease [Metallosphaera
yellowstonensis MK1]
gi|373524434|gb|EHP69311.1| flap structure-specific endonuclease [Metallosphaera
yellowstonensis MK1]
Length = 301
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 12/133 (9%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------------LL 222
+HL G+++R L+ + PV+VFDG P+LK + + + +++ L
Sbjct: 9 SHLNGVFYRTVNLIEEGVIPVYVFDGKPPELKMEELENRRRLKEEAERKLVKAKELGKLE 68
Query: 223 ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
E K ++++S +T+ M+ E++ELL GVP + AP E EA+ A L N T + D D
Sbjct: 69 EMRKYSQMSSRLTKGMAEESKELLSRMGVPIVNAPSEGEAEAAYLNYKNITFAAASQDYD 128
Query: 283 IWLFGARTVYKNF 295
LFGA+ + +N
Sbjct: 129 SLLFGAKRLIRNL 141
>gi|73668744|ref|YP_304759.1| flap endonuclease-1 [Methanosarcina barkeri str. Fusaro]
gi|121723542|sp|Q46D63.1|FEN_METBF RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|72395906|gb|AAZ70179.1| flap endonuclease 1 [Methanosarcina barkeri str. Fusaro]
Length = 338
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL-----------L 222
+HL GL +R L+ IKPVF+FDG P LK +T++ ++ R+ L L
Sbjct: 55 TSHLSGLLYRTASLIEVGIKPVFIFDGKPPDLKSETLNRRKEVRESSLEKWENAKVEGDL 114
Query: 223 ERG-KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K + +S + +++ +++ LL + G+P+I AP E EAQ A + L V + D
Sbjct: 115 EAAYKYAQASSKVDQEIVEDSKYLLSIMGIPWIQAPCEGEAQAAHMVLKKDADYVASQDY 174
Query: 282 DIWLFGARTVYKNF 295
D +LFGA TV +N
Sbjct: 175 DSFLFGAPTVIRNL 188
>gi|432927428|ref|XP_004081007.1| PREDICTED: flap endonuclease 1-like [Oryzias latipes]
Length = 380
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLL---ERGKQ 227
+HL+G+++R ++L IKPV+VFDG PQLK + + R ++LL E G+Q
Sbjct: 61 TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSSELEKRGERRAEAEKLLAQAQEMGEQ 120
Query: 228 ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
T+ +T+Q + E ++LL L GVP+I AP EAEA CA+L T+D
Sbjct: 121 ENVEKFTKRLVKVTKQHNDECKKLLSLMGVPYIEAPCEAEASCAALVKEGKVFATATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG + ++
Sbjct: 181 DGLTFGTNVLLRHL 194
>gi|24987745|pdb|1MC8|A Chain A, Crystal Structure Of Flap Endonuclease-1 R42e Mutant From
Pyrococcus Horikoshii
gi|24987746|pdb|1MC8|B Chain B, Crystal Structure Of Flap Endonuclease-1 R42e Mutant From
Pyrococcus Horikoshii
Length = 343
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 139 NIVINKLLVDLISDVSIWLHQLTK--GTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVF 196
N+ K+ +D ++ + +L + + GT + +HL GL++R L+ IKP +
Sbjct: 18 NLYGKKIAIDALNAIYQFLSTIRQEDGTPLMDSKGRITSHLSGLFYRTINLMEAGIKPAY 77
Query: 197 VFDGGVPQLKKQTISTLEKDRDQLLL------------ERGKQTRLASTITEQMSREAQE 244
VFDG P+ K++ + + R++ L E K + A+ + E + +A++
Sbjct: 78 VFDGKPPEFKRKELEKRREAREEAELKWKEALAKGNLEEARKYAQRATKVNEMLIEDAKK 137
Query: 245 LLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
LLQL G+P I AP E EAQ A + + D D LFGA + +N
Sbjct: 138 LLQLMGIPIIQAPSEGEAQAAYMASKGDVYASASQDYDSLLFGAPRLIRNL 188
>gi|398398872|ref|XP_003852893.1| hypothetical protein MYCGRDRAFT_40040, partial [Zymoseptoria
tritici IPO323]
gi|339472775|gb|EGP87869.1| hypothetical protein MYCGRDRAFT_40040 [Zymoseptoria tritici IPO323]
Length = 517
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 83/165 (50%), Gaps = 28/165 (16%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDG-GVPQLKK 207
L D+SIWL Q+ G GGS N L Y+R+ +LL I P+FVFDG P K+
Sbjct: 30 LAIDISIWLFQIQAGK----GGS--NPALRTFYYRLLRLLTHNIHPLFVFDGPNKPTFKR 83
Query: 208 QTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASL 267
G R+AS + E + A++LL+ FG P+ VAPGEAEA+CA L
Sbjct: 84 NKKVG------------GPGVRVAS-VPEFL---AKQLLKQFGFPWHVAPGEAEAECALL 127
Query: 268 ELGNHTQGVITDDSDIWLFGARTVYKNFFDKKS-----HVLRYTA 307
+ V+++D D +FG+ K++ + S HV Y A
Sbjct: 128 QREGIVDAVLSEDVDTLMFGSGVTLKSWTAESSQKTPTHVTVYRA 172
>gi|407851500|gb|EKG05394.1| hypothetical protein TCSYLVIO_003532 [Trypanosoma cruzi]
Length = 393
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 25/167 (14%)
Query: 152 DVSIWLHQLT---KGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGV 202
D S+ ++Q KG D G + N +HL GL+ R +++ ++P++VFDG
Sbjct: 34 DASMTIYQFIIAMKGFQDGQGMELTNEAGEVTSHLNGLFARTLRMVDEGLRPIYVFDGKP 93
Query: 203 PQLK--------------KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQL 248
P LK +Q T +++ + L+E K ++ ++ + EA++LLQL
Sbjct: 94 PTLKASELQERRQRAEEAQQLFDTAKEEGNDELME--KMSKRTVRVSREQLEEAKKLLQL 151
Query: 249 FGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
G+P + AP EAEAQCA L N V T+D D FGA + ++
Sbjct: 152 MGIPVVQAPSEAEAQCAELVKKNKAWAVATEDMDALTFGAPVMLRHL 198
>gi|170593271|ref|XP_001901388.1| Flap endonuclease-1 [Brugia malayi]
gi|317374878|sp|A8QCH0.1|FEN1_BRUMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|158591455|gb|EDP30068.1| Flap endonuclease-1, putative [Brugia malayi]
Length = 378
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 19/155 (12%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q G+ +HL+G+++R +++ IKPV+VFDG PQ+K
Sbjct: 34 DASMCLYQFLIAVRQDGSQLQTESGETTSHLLGMFYRTIRMIDNGIKPVYVFDGKPPQMK 93
Query: 207 KQTI-------STLEKDRDQLLLERGKQTRLAS------TITEQMSREAQELLQLFGVPF 253
+ + EK R+ + E G +T + +T++ S EA+ L+ L G+P
Sbjct: 94 TSELEKRTERRTEAEKQRNDAV-ELGDETSVNKFEKRLVKVTKEQSEEAKRLVTLMGIPV 152
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
+ AP EAEAQCA+L +++D D FG+
Sbjct: 153 LDAPCEAEAQCAALAKAGKVFATVSEDMDALTFGS 187
>gi|14591211|ref|NP_143287.1| flap endonuclease-1 [Pyrococcus horikoshii OT3]
gi|28380013|sp|O50123.1|FEN_PYRHO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|3257838|dbj|BAA30521.1| 343aa long hypothetical 5' nuclease [Pyrococcus horikoshii OT3]
Length = 343
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 139 NIVINKLLVDLISDVSIWLHQLTK--GTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVF 196
N+ K+ +D ++ + +L + + GT + +HL GL++R L+ IKP +
Sbjct: 18 NLYGKKIAIDALNAIYQFLSTIRQRDGTPLMDSKGRITSHLSGLFYRTINLMEAGIKPAY 77
Query: 197 VFDGGVPQLKKQTISTLEKDRDQLLL------------ERGKQTRLASTITEQMSREAQE 244
VFDG P+ K++ + + R++ L E K + A+ + E + +A++
Sbjct: 78 VFDGKPPEFKRKELEKRREAREEAELKWKEALAKGNLEEARKYAQRATKVNEMLIEDAKK 137
Query: 245 LLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
LLQL G+P I AP E EAQ A + + D D LFGA + +N
Sbjct: 138 LLQLMGIPIIQAPSEGEAQAAYMASKGDVYASASQDYDSLLFGAPRLIRNL 188
>gi|68076243|ref|XP_680041.1| DNA repair endonuclease [Plasmodium berghei strain ANKA]
gi|56500911|emb|CAH98970.1| DNA repair endonuclease, putative [Plasmodium berghei]
Length = 1262
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/92 (42%), Positives = 58/92 (63%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
+K ++L+ E K TI E+M+ + + LL FG+P+I AP EAEAQC+ L N+
Sbjct: 915 QKKGEELMKEYKKLKNNNITINEEMNEDIKLLLDFFGIPYIQAPCEAEAQCSYLNNNNYC 974
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+I+DDSD+ +F +T+ KNFF+KK V Y
Sbjct: 975 DAIISDDSDVIVFSGKTIIKNFFNKKKTVEVY 1006
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 27/86 (31%)
Query: 152 DVSIWLHQLTKGTH---------------------------DLAGGSVPNAHLIGLYHRI 184
DVSIWL++L G + DL ++ H+ + RI
Sbjct: 30 DVSIWLYELIYGNNLKSSRNNNLDDLGMFNDLWLDFSENNSDLKLSNLKKGHIYFFFLRI 89
Query: 185 CKLLFFKIKPVFVFDGGVPQLKKQTI 210
CKLL++ I+P+F+FDG P+LKK+TI
Sbjct: 90 CKLLYYNIRPIFIFDGIPPELKKRTI 115
>gi|346322835|gb|EGX92433.1| DNA-repair protein rad2 [Cordyceps militaris CM01]
Length = 394
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ + + L LE K+T
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQTALEGLEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q LL L G+PFIVAP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNAECQRLLALMGIPFIVAPTEAEAQCAVLAKAGKVFAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|82187497|sp|Q6TNU4.1|FEN1A_DANRE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|37362214|gb|AAQ91235.1| flap structure-specific endonuclease 1 [Danio rerio]
gi|47940409|gb|AAH71488.1| Fen1 protein [Danio rerio]
Length = 380
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLL---ERGKQ 227
+HL+G+++R ++L IKPV+VFDG PQLK + + R ++LL E G+Q
Sbjct: 61 TSHLMGMFYRTIRMLESGIKPVYVFDGKPPQLKSGELEKRVERRAEAEKLLAQAQEAGEQ 120
Query: 228 ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
++ +T+Q + E ++LL L GVP+I AP EAEA CA+L T+D
Sbjct: 121 ENIDKFSKRLVKVTKQHNEECKKLLSLMGVPYIEAPCEAEASCAALVKAGKVYATATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG + ++
Sbjct: 181 DGLTFGTTVLLRHL 194
>gi|407414008|gb|EKF35678.1| hypothetical protein MOQ_002324 [Trypanosoma cruzi marinkellei]
Length = 393
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 25/167 (14%)
Query: 152 DVSIWLHQLT---KGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGV 202
D S+ ++Q KG D G + N +HL GL+ R +++ ++P++VFDG
Sbjct: 34 DASMTIYQFIIAMKGFQDGQGMELTNEAGEVTSHLNGLFARTLRMVDEGLRPIYVFDGKP 93
Query: 203 PQLK--------------KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQL 248
P LK +Q T +++ + L+E K ++ ++ + EA++LLQL
Sbjct: 94 PTLKASELQERRQRAEEAQQLFDTAKEEGNDELME--KMSKRTVRVSREQLEEAKKLLQL 151
Query: 249 FGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
G+P + AP EAEAQCA L N V T+D D FGA + ++
Sbjct: 152 MGIPVVQAPSEAEAQCAELVKKNKAWAVATEDMDALTFGAPVMLRHL 198
>gi|340367941|ref|XP_003382511.1| PREDICTED: flap endonuclease 1-like [Amphimedon queenslandica]
Length = 373
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 14/135 (10%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGK------- 226
+HL+G ++R +++ IKPV+VFDG P +K ++ R + E K
Sbjct: 61 TSHLMGFFYRTIRMVDNGIKPVYVFDGKPPTMKSGELAKRADRRAEAQKELLKAEEQGDI 120
Query: 227 ------QTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDD 280
Q RL E +S EA++LL L G+P++ AP EAEAQCA+L T+D
Sbjct: 121 QEVEKFQKRLVKVTPEHVS-EAKKLLSLMGIPYVEAPCEAEAQCAALTKAGKVYATATED 179
Query: 281 SDIWLFGARTVYKNF 295
D FG+ + +N
Sbjct: 180 MDALTFGSSILVRNL 194
>gi|407916553|gb|EKG09919.1| DNA repair protein [Macrophomina phaseolina MS6]
Length = 392
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTL--EKDRDQLLLERGKQT--- 228
+HL+G+++R +++ IKP+FVFDG P+LK ++ K Q E K+T
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLFVFDGAPPKLKSGELAKRFQRKSEAQEAHEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q LL+L G+P+I+AP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLFGARTVYKNF 295
D F + + ++
Sbjct: 181 DTLTFNSPVLLRHL 194
>gi|195491935|ref|XP_002093778.1| GE20569 [Drosophila yakuba]
gi|194179879|gb|EDW93490.1| GE20569 [Drosophila yakuba]
Length = 727
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 173 PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAS 232
P HL L+ R C L++ ++ PVFV +G P+LK Q I+ R++L RG + + +
Sbjct: 48 PRHHLKNLFFRTCYLIWEQVTPVFVLEGVAPKLKSQVIAK----RNELQF-RGVKPKNSP 102
Query: 233 TITEQMS--------------REAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
T+ + ++ + LL G+ + PGEAEA CA L GVI+
Sbjct: 103 ECTQSQAPKGDKGRSRFNHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVIS 162
Query: 279 DDSDIWLFGARTVYKNF 295
DSD + +GA VY+NF
Sbjct: 163 QDSDCFAYGAIRVYRNF 179
>gi|402080846|gb|EJT75991.1| DNA-repair protein rad2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 394
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ + + + L LE ++T
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELARRYQRKQEALEGLEEARETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E + LL+L G+P+IVAP EAEAQCA+L ++D
Sbjct: 121 EEVEKFSRRTVHVTREHNEECRRLLKLMGIPYIVAPTEAEAQCAALARAGKVFAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|317374947|sp|A8NQC2.3|FEN1_COPC7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 458
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 26/141 (18%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIST-------------------LE 214
+HL+G ++R +++ IKP +VFDG P+LKK +S
Sbjct: 62 TSHLMGFFYRTIRIVENGIKPAYVFDGKPPELKKGVLSKRFEKREEAKEEGEEAKEIGTA 121
Query: 215 KDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQ 274
+D D+ +R +T+Q + E Q+LL+L GVP ++AP EAEAQCA L G
Sbjct: 122 EDVDRF-------SRRTVKVTKQHNEECQKLLRLMGVPCVIAPSEAEAQCAELARGGKVY 174
Query: 275 GVITDDSDIWLFGARTVYKNF 295
++D D F A ++++
Sbjct: 175 AAGSEDMDTLTFNAPILFRHL 195
>gi|310800740|gb|EFQ35633.1| XPG domain-containing protein [Glomerella graminicola M1.001]
Length = 394
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTL--EKDRDQLLLERGKQT--- 228
+HL+GL++R +++ IKP++VFDG P+LK ++ K + LE K+T
Sbjct: 61 TSHLMGLFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATVGLEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + + Q+LL+L G+P+IVAP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNADCQKLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLTF 185
>gi|357441985|ref|XP_003591270.1| Flap endonuclease 1a [Medicago truncatula]
gi|355480318|gb|AES61521.1| Flap endonuclease 1a [Medicago truncatula]
Length = 384
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 83/171 (48%), Gaps = 26/171 (15%)
Query: 152 DVSIWLHQL-----TKGTHDLA--GGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S+ ++Q GT L G V +HL G++ R +LL +KPV+VFDG P+
Sbjct: 34 DASMSIYQFLIVVGRSGTEMLTNEAGEV-TSHLQGMFARTIRLLEAGMKPVYVFDGKPPE 92
Query: 205 LKKQTIS---------------TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLF 249
+K Q + LE D + + + K+T +T+Q + + + LL+L
Sbjct: 93 MKNQELKKRLSKRAEATAGLTEALEADNKEDIEKFSKRT---VKVTKQHNDDCKRLLRLM 149
Query: 250 GVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKS 300
GVP + AP EAEAQCA+L V ++D D FGA ++ D S
Sbjct: 150 GVPVVEAPSEAEAQCAALCKAGKVYAVASEDMDSLTFGAPKFLRHLMDPSS 200
>gi|299743075|ref|XP_001835524.2| flap endonuclease-1 [Coprinopsis cinerea okayama7#130]
gi|298405488|gb|EAU86309.2| flap endonuclease-1 [Coprinopsis cinerea okayama7#130]
Length = 422
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 26/141 (18%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIST-------------------LE 214
+HL+G ++R +++ IKP +VFDG P+LKK +S
Sbjct: 26 TSHLMGFFYRTIRIVENGIKPAYVFDGKPPELKKGVLSKRFEKREEAKEEGEEAKEIGTA 85
Query: 215 KDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQ 274
+D D+ +R +T+Q + E Q+LL+L GVP ++AP EAEAQCA L G
Sbjct: 86 EDVDRF-------SRRTVKVTKQHNEECQKLLRLMGVPCVIAPSEAEAQCAELARGGKVY 138
Query: 275 GVITDDSDIWLFGARTVYKNF 295
++D D F A ++++
Sbjct: 139 AAGSEDMDTLTFNAPILFRHL 159
>gi|50292567|ref|XP_448716.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608857|sp|Q6FM28.1|FEN1_CANGA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|49528028|emb|CAG61679.1| unnamed protein product [Candida glabrata]
Length = 381
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 17/156 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q GG + +HL+G+++R +++ IKP +VFDG P L
Sbjct: 34 DASMSLYQFLIAVRQQDGGQLSTETGETTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPVL 93
Query: 206 KKQTISTLEKDRDQLL---------LERGKQTRLASTITEQMSREAQELLQLFGVPFIVA 256
K + R++ E+ K R ++++ + EA++LL+L G+P++ A
Sbjct: 94 KSHELDKRTSRREETEKKLAEATEEAEKMKHERRLVKVSKEHNDEAKKLLELMGIPYVNA 153
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVY 292
PGEAEAQCA L ++D D + RT Y
Sbjct: 154 PGEAEAQCAELAKKGKVYAAASEDMDTLCY--RTPY 187
>gi|357441987|ref|XP_003591271.1| Flap endonuclease 1a [Medicago truncatula]
gi|355480319|gb|AES61522.1| Flap endonuclease 1a [Medicago truncatula]
Length = 369
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 83/171 (48%), Gaps = 26/171 (15%)
Query: 152 DVSIWLHQL-----TKGTHDLA--GGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S+ ++Q GT L G V +HL G++ R +LL +KPV+VFDG P+
Sbjct: 19 DASMSIYQFLIVVGRSGTEMLTNEAGEV-TSHLQGMFARTIRLLEAGMKPVYVFDGKPPE 77
Query: 205 LKKQTIS---------------TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLF 249
+K Q + LE D + + + K+T +T+Q + + + LL+L
Sbjct: 78 MKNQELKKRLSKRAEATAGLTEALEADNKEDIEKFSKRT---VKVTKQHNDDCKRLLRLM 134
Query: 250 GVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKS 300
GVP + AP EAEAQCA+L V ++D D FGA ++ D S
Sbjct: 135 GVPVVEAPSEAEAQCAALCKAGKVYAVASEDMDSLTFGAPKFLRHLMDPSS 185
>gi|353235791|emb|CCA67798.1| probable DNA repair endonuclease rad2 [Piriformospora indica DSM
11827]
Length = 366
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAST 233
+HL+G ++R +++ IKP +VFDG P+LK ++ + R++ E + + +T
Sbjct: 26 TSHLMGFFYRTIRMVENGIKPCYVFDGKPPELKSGVLAKRFERREEAKEEGDEAKEVGTT 85
Query: 234 ------------ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
+T++ + E ++LL L G+P +VAP EAEAQCA L G G ++D
Sbjct: 86 EEVEKFSRRQVRVTKEHNEECRKLLGLMGIPVVVAPSEAEAQCAELARGGLVYGAGSEDM 145
Query: 282 DIWLFGARTVYKNFF---DKKSHVLRYTAPDI 310
D F + + ++ ++K +L + P +
Sbjct: 146 DTLTFNSPILLRHLTFSENRKEPILEISLPAV 177
>gi|341583087|ref|YP_004763579.1| flap endonuclease-1 [Thermococcus sp. 4557]
gi|340810745|gb|AEK73902.1| flap endonuclease-1 [Thermococcus sp. 4557]
Length = 341
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 139 NIVINKLLVDLISDVSIWLHQLTK--GTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVF 196
N+ K+ +D + + +L + + GT + +HL GL++R L+ IKP +
Sbjct: 18 NLYGRKVAIDAFNAIYQFLSTIRQRDGTPLMDSRGRITSHLSGLFYRNINLMEAGIKPAY 77
Query: 197 VFDGGVPQLKKQTISTLEKDRDQL------LLERG------KQTRLASTITEQMSREAQE 244
VFDG P+ KK+ I + R++ LERG K A+ + E + +A+
Sbjct: 78 VFDGKPPEFKKKEIEKRREAREEAKEKWYEALERGNLEEAKKYAMRATRVNEGLINDAKR 137
Query: 245 LLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKN 294
LL+L G+P I AP E EAQ A + + D D LFGA + +N
Sbjct: 138 LLELMGIPVIQAPSEGEAQAAYMAARKKVYASASQDYDSLLFGAPRLVRN 187
>gi|224050601|ref|XP_002192880.1| PREDICTED: flap endonuclease 1 [Taeniopygia guttata]
Length = 386
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ------------LL 221
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R +
Sbjct: 61 TSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERRAEAEKHLQEAQEAGEE 120
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K ++ +T Q ++E ++LL L G+P++ APGEAEA CA+L T+D
Sbjct: 121 ENIEKYSKRLVKVTPQHTQECKKLLTLMGIPYVEAPGEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|26345786|dbj|BAC36544.1| unnamed protein product [Mus musculus]
Length = 411
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERG-- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R Q E G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQEAGME 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|154292277|ref|XP_001546714.1| hypothetical protein BC1G_14593 [Botryotinia fuckeliana B05.10]
Length = 302
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G+++R +++ IKPV+VFDG P+LK ++ + + LE K+T
Sbjct: 73 TSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFQRKATATEGLEEAKETGTA 132
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q LL+L G+P+I+AP EAEAQCA+L ++D
Sbjct: 133 EDIEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAALARAGKVYAAASEDM 192
Query: 282 DIWLF 286
D F
Sbjct: 193 DTLCF 197
>gi|380479712|emb|CCF42855.1| XPG domain-containing protein [Colletotrichum higginsianum]
Length = 394
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+GL++R +++ IKP++VFDG P+LK ++ + + + LE K+T
Sbjct: 61 TSHLMGLFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + + Q+LL+L G+PFIVAP EAEAQCA L ++D
Sbjct: 121 EEVEKFSRRTVRVTREHNADCQKLLKLMGIPFIVAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLTF 185
>gi|195337621|ref|XP_002035427.1| GM13928 [Drosophila sechellia]
gi|194128520|gb|EDW50563.1| GM13928 [Drosophila sechellia]
Length = 726
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 173 PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAS 232
P HL L+ R C L++ ++ PVFV +G P+LK Q I+ R++L RG + + +
Sbjct: 48 PRHHLKNLFFRTCYLIWEQVTPVFVLEGVAPKLKGQVIAK----RNELQF-RGVKPKNSP 102
Query: 233 TITEQMS--------------REAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
T+ + ++ + LL G+ + PGEAEA CA L GVI+
Sbjct: 103 ECTQSQAPKADKGRSRFNHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVIS 162
Query: 279 DDSDIWLFGARTVYKNF 295
DSD + +GA VY+NF
Sbjct: 163 QDSDCFAYGAVRVYRNF 179
>gi|171679661|ref|XP_001904777.1| hypothetical protein [Podospora anserina S mat+]
gi|170939456|emb|CAP64684.1| unnamed protein product [Podospora anserina S mat+]
Length = 379
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTL--EKDRDQLLLERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ K LE K+T
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEAHEGLEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q+LL+L G+P+IVAP EAEAQCA L ++D
Sbjct: 121 EEVEKFSRRTVRVTREHNAECQKLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|303388735|ref|XP_003072601.1| flap endonuclease-1 [Encephalitozoon intestinalis ATCC 50506]
gi|303301742|gb|ADM11241.1| flap endonuclease-1 [Encephalitozoon intestinalis ATCC 50506]
Length = 345
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 16/145 (11%)
Query: 173 PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR--------------D 218
P +HL+G ++R +++ I PV+VFDG P++K + + + R D
Sbjct: 59 PTSHLVGFFYRTIRMVELGIIPVYVFDGVPPEVKMKELEKRSERRAAADKEYKEASEMGD 118
Query: 219 QLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
+ L+E + + + +T E + LL L G+PF AP EAEA CA L GV T
Sbjct: 119 KKLMEMYDKRK--TKVTGMHVEECKRLLGLMGIPFETAPSEAEAYCAFLCKKKAVYGVAT 176
Query: 279 DDSDIWLFGARTVYKNFFDKKSHVL 303
+D D FG+ V +NF +S L
Sbjct: 177 EDMDALTFGSPVVLRNFSGSQSRKL 201
>gi|255938165|ref|XP_002559853.1| Pc13g14460 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584473|emb|CAP92515.1| Pc13g14460 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 873
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 147 VDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
+ + D+SIWL Q+ G GG N L L++R+ KLL + P+FV+DG
Sbjct: 33 IRIAVDISIWLFQVQAGR----GGR--NPELRTLFYRLLKLLALPVHPLFVYDG------ 80
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
R + +RGK S + + +++L++ F P+ APGEAEA+CA
Sbjct: 81 ----------RQKPAFKRGKAVSARSYGNAPIIKRSKDLIERFRFPWHEAPGEAEAECAR 130
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNF 295
L+ V+++D D +FG+ NF
Sbjct: 131 LQQAGIVDAVMSNDVDALMFGSSLTIMNF 159
>gi|449435964|ref|XP_004135764.1| PREDICTED: flap endonuclease 1-like [Cucumis sativus]
Length = 377
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 83/169 (49%), Gaps = 20/169 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLA--GGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S+ ++Q GT L G V +HL G+++R +LL IKPV+VFDG P
Sbjct: 34 DASMSIYQFLIVVGRSGTEMLTNEAGEV-TSHLQGMFNRTIRLLEAGIKPVYVFDGKPPD 92
Query: 205 LKKQTISTLEKDRDQLL------LERG------KQTRLASTITEQMSREAQELLQLFGVP 252
LKKQ ++ R +E G K ++ +T+Q + + + LL+L GVP
Sbjct: 93 LKKQELAKRYSKRADATEDLADAIEVGNKDDIEKFSKRTVKVTKQHNDDCKRLLRLMGVP 152
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSH 301
I AP EAEAQCA+L V ++D D FG+ ++ D S
Sbjct: 153 VIEAPSEAEAQCAALCKLGKVYAVASEDMDSLTFGSPRFLRHLMDPSSR 201
>gi|388498254|gb|AFK37193.1| unknown [Lotus japonicus]
Length = 366
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 21/154 (13%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS---------------TLEKDRDQ 219
+HL G++ R +LL +KPV+VFDG P +KKQ ++ L+ D +
Sbjct: 47 SHLQGMFTRTIRLLESGMKPVYVFDGKPPDMKKQELAKRLSKRAEATEDLSEALKADNKE 106
Query: 220 LLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITD 279
+ + K+T +T+Q + + ++LL+L GVP + AP EAEAQCA+L V ++
Sbjct: 107 DIEKFSKRT---VKVTKQHNEDYKKLLRLMGVPVVEAPSEAEAQCAALCKAGMVYAVASE 163
Query: 280 DSDIWLFGARTVYKNFFD---KKSHVLRYTAPDI 310
D D FGA ++ D KK V+ + I
Sbjct: 164 DMDSLTFGAPKFLRHLMDPSSKKVPVMEFEVAKI 197
>gi|340966641|gb|EGS22148.1| hypothetical protein CTHT_0016650 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 395
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTL--EKDRDQLLLERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ K Q LE K+T
Sbjct: 61 TSHLMGMFYRTLRMVDAGIKPLYVFDGKPPKLKSGELAKRFQRKQEAQEDLEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q LL+L G+P+I+AP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|336259381|ref|XP_003344492.1| hypothetical protein SMAC_08742 [Sordaria macrospora k-hell]
gi|317376194|sp|D1ZT73.1|FEN1_SORMK RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|380087456|emb|CCC05373.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 394
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ + + + LE K+T
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q+LL+L G+P+IVAP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNAECQKLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|378733116|gb|EHY59575.1| flap endonuclease 1 [Exophiala dermatitidis NIH/UT8656]
Length = 395
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 144 KLLVDL-ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGV 202
K+ +D +S S + ++G ++ +HL+G+++R +++ IKP++VFDG
Sbjct: 30 KVAIDASMSIYSFLIAVRSEGQQLMSDTGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAP 89
Query: 203 PQLKKQTIST--LEKDRDQLLLERGKQT----------RLASTITEQMSREAQELLQLFG 250
P+LK ++ K+ E K+T R +T + + E + LL+L G
Sbjct: 90 PKLKSGELAKRFARKNEANEQAEEAKETGTAEEVEKFSRRTVRVTREHNEECRRLLKLMG 149
Query: 251 VPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
+P+I+AP EAEAQCA L ++D D F A
Sbjct: 150 IPYIIAPTEAEAQCAVLARAGKVYAAASEDMDTLCFNA 187
>gi|221113045|ref|XP_002168588.1| PREDICTED: flap endonuclease GEN homolog 1-like [Hydra
magnipapillata]
Length = 299
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 15/148 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+SIW+ + K SV N+H+ ++ RIC L F +K + V +G P LK+ T+
Sbjct: 30 DLSIWIVEAIKLKQ-----SVANSHIRNMFFRICYLRKFGVKLIIVIEGKAPDLKQNTM- 83
Query: 212 TLEKDRDQLLLERGKQTRLASTIT----EQMSREAQELLQLFGVPFIVAPGEAEAQCASL 267
R + + G + AST+ + + E ELL L G+P+I A GEAE CA L
Sbjct: 84 -----RYRNFCQYGVKLGTASTVGRNRFQALILECCELLDLLGIPYIRATGEAEQMCAFL 138
Query: 268 ELGNHTQGVITDDSDIWLFGARTVYKNF 295
+ G +T+D D +L+G + +Y++F
Sbjct: 139 NSKKISDGCLTNDGDFFLYGGKCIYRDF 166
>gi|218200332|gb|EEC82759.1| hypothetical protein OsI_27479 [Oryza sativa Indica Group]
Length = 632
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRI-------CKLLFFKIKPVFVFDGGVPQ 204
D+S WL Q+ A +L L+HRI C LLF P+ +F
Sbjct: 30 DLSCWLVQMYSANRSPAFAK-DKVYLKNLFHRIRALLALNCTLLFVTGNPILLFYFSFLA 88
Query: 205 LKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQC 264
K+ S + L R K + + I +EA+ L G+P + EAEAQC
Sbjct: 89 AKE---SDQPNSHPSISLRRNKGSEFSCMI-----KEAKRLGMALGIPCLDGLEEAEAQC 140
Query: 265 ASLELGNHTQGVITDDSDIWLFGARTVYKN-FFDKKSHVLRYTAPDI 310
ASL+L + G T DSD +LFGARTVY++ F + +V+ Y DI
Sbjct: 141 ASLDLESLCDGCFTSDSDAFLFGARTVYRDVFIGEGGYVICYEMEDI 187
>gi|209878979|ref|XP_002140930.1| DNA-repair protein UVH3 [Cryptosporidium muris RN66]
gi|209556536|gb|EEA06581.1| DNA-repair protein UVH3, putative [Cryptosporidium muris RN66]
Length = 1017
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Query: 210 ISTLEKDRDQLLLERGKQTRLAST-ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLE 268
IS LE++ D+++ + Q R + IT+++ + + LLQ FG+P+I +PGEAEAQ + L
Sbjct: 715 ISILEEEHDKIMSKFQVQRRYTNAEITKEIQFQVRMLLQAFGIPWIDSPGEAEAQASILT 774
Query: 269 LGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
GV++DDSD LFGA+ VY+NFF + V +Y DI +
Sbjct: 775 QLGLCDGVLSDDSDCILFGAKCVYRNFF-CGTTVEKYVKVDIENFL 819
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIWL Q G D G + AHL+G + R+CKLL++ I PV +FDG P++KK+
Sbjct: 27 LAVDASIWLKQFLTGLRDNEGNTPLGAHLLGFFKRLCKLLYYGIYPVVIFDGIPPEIKKR 86
Query: 209 TI 210
T+
Sbjct: 87 TL 88
>gi|148709395|gb|EDL41341.1| flap structure specific endonuclease 1, isoform CRA_b [Mus
musculus]
Length = 432
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERG-- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R Q E G
Sbjct: 113 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQEAGME 172
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 173 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDM 232
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 233 DCLTFGSPVLMRHL 246
>gi|47224621|emb|CAG03605.1| unnamed protein product [Tetraodon nigroviridis]
Length = 577
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 8/129 (6%)
Query: 170 GSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD---QLLLERGK 226
G V HL R+ L +K VFV +G P+LK +T+S + R Q
Sbjct: 2 GRVSKPHL-----RVSSLTLMGVKLVFVMEGEAPKLKAETMSKRTEARYGGFQKTSSTKS 56
Query: 227 QTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
+T + + + +E ++L + GVP++ A GEAEA CA L+ G IT+D D++L+
Sbjct: 57 KTSTSRGRFKAVLKECADMLDILGVPWVTAAGEAEAMCAYLDSQGLVDGCITNDGDVFLY 116
Query: 287 GARTVYKNF 295
GA+TVY++F
Sbjct: 117 GAQTVYRSF 125
>gi|357608737|gb|EHJ66129.1| hypothetical protein KGM_15891 [Danaus plexippus]
Length = 722
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 173 PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIST-----LEKDRDQLLLERGKQ 227
P +L L+ R L+ + P+FV +G P+LK+ ++ + + E+ KQ
Sbjct: 48 PKLYLRNLFFRTLYLVLSDVNPIFVLEGDAPELKRDVMAARNALQFKGAAPKATTEKTKQ 107
Query: 228 TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFG 287
T + T + + +E + LL+ GV + GEAEA CA L V++ DSD + +G
Sbjct: 108 TNITRTRFKGVLKECENLLRTMGVRCVKGRGEAEAACARLNAEGLVDAVVSQDSDCFAYG 167
Query: 288 ARTVYKNF 295
A+ VY+NF
Sbjct: 168 AKKVYRNF 175
>gi|19115884|ref|NP_594972.1| FEN-1 endonuclease Rad2 [Schizosaccharomyces pombe 972h-]
gi|730469|sp|P39750.1|FEN1_SCHPO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=DNA
repair protein rad2; AltName: Full=Flap
structure-specific endonuclease 1
gi|2408077|emb|CAB16282.1| FEN-1 endonuclease Rad2 [Schizosaccharomyces pombe]
gi|4456854|emb|CAB36991.1| RAD2 protein [Schizosaccharomyces pombe]
Length = 380
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 20/178 (11%)
Query: 130 QHSMLEFRCNIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHR 183
+H+ + N + N + D S+ L+Q G + N +HL+G+++R
Sbjct: 12 EHAPASVKHNDIKNYFGRKVAIDASMSLYQFLIQVRSQDGQQLMNEQGETTSHLMGMFYR 71
Query: 184 ICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAST---------- 233
+++ IKP FVFDG P LK ++ R Q E ++T+ T
Sbjct: 72 TLRIVDNGIKPCFVFDGKPPTLKSGELAK-RVARHQKAREDQEETKEVGTAEMVDRFAKR 130
Query: 234 ---ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
+T Q + EA+ LL+L G+PF+ AP EAEAQCA+L ++D D F A
Sbjct: 131 TVKVTRQHNDEAKRLLELMGIPFVNAPCEAEAQCAALARSGKVYAAASEDMDTLCFQA 188
>gi|317376212|sp|B2VTT3.2|FEN1_PYRTR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS------TLEKDRDQLLLERG-- 225
+HL+GL++R +++ IKP++VFDG P+LK ++ T + E G
Sbjct: 61 TSHLMGLFYRTMRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKTEAHAAAEEAKETGTA 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K +R +T + + E Q LL+L G+P+IVAP EAEAQCA+L G ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNEECQRLLKLMGIPYIVAPTEAEAQCAALARGGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLTF 185
>gi|70953099|ref|XP_745672.1| DNA repair endonuclease [Plasmodium chabaudi chabaudi]
gi|56526070|emb|CAH76802.1| DNA repair endonuclease, putative [Plasmodium chabaudi chabaudi]
Length = 1281
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 59/92 (64%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
+K+ ++L+ E + TI E+M+ + + LL FG+P+I +P EAEAQC+ L N+
Sbjct: 933 QKEGEELMKEYKRLKNTNITINEEMNEDIKLLLNFFGIPYIQSPCEAEAQCSYLNNNNYC 992
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+I+DDSD+ +F +T+ KNFF+KK V Y
Sbjct: 993 DAIISDDSDVIVFSGKTIIKNFFNKKKTVEVY 1024
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 27/86 (31%)
Query: 152 DVSIWLHQLTKGTH---------------------------DLAGGSVPNAHLIGLYHRI 184
DVSIWL++L G + DL ++ HL + RI
Sbjct: 30 DVSIWLYELIYGNNLKSSRNNNFDDLGVFNDLWLDFSEQNSDLKLSNLKKGHLYFFFLRI 89
Query: 185 CKLLFFKIKPVFVFDGGVPQLKKQTI 210
CKLL++ I+P+F+FDG P+LKK+TI
Sbjct: 90 CKLLYYNIRPIFIFDGTPPELKKRTI 115
>gi|148709394|gb|EDL41340.1| flap structure specific endonuclease 1, isoform CRA_a [Mus
musculus]
Length = 396
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERG-- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R Q E G
Sbjct: 77 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQEAGME 136
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 137 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDM 196
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 197 DCLTFGSPVLMRHL 210
>gi|426196176|gb|EKV46105.1| hypothetical protein AGABI2DRAFT_193982 [Agaricus bisporus var.
bisporus H97]
Length = 429
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS------------TLEKDRDQLL 221
+HL+G ++R +++ IKP +VFDG P LKK +S E +
Sbjct: 62 TSHLMGFFYRTIRIVENGIKPAYVFDGKPPDLKKGVLSKRFERREEAKEEGEEAKETGTV 121
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K +R +T++ + E LL+L G+P +VAP EAEAQCA L G ++D
Sbjct: 122 EEVDKLSRRTVKVTKEHNAECIRLLKLMGIPVVVAPSEAEAQCAELARGGKVYAAGSEDM 181
Query: 282 DIWLFGARTVYKNF 295
D F A +Y++
Sbjct: 182 DTLTFNAPILYRHL 195
>gi|392569258|gb|EIW62431.1| hypothetical protein TRAVEDRAFT_68878 [Trametes versicolor
FP-101664 SS1]
Length = 1191
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 34/192 (17%)
Query: 105 EILTELLEQRKLSSWHKMHEMPQNDQHSMLEFRCNIVINKLLVDLISDVSIWL-HQL-TK 162
EIL + E R L+ + +N H FR + D IWL H L +
Sbjct: 8 EILNKAGESRALAQLAVVDGFDKN-AHGTRSFRLGV-----------DAGIWLRHALHSA 55
Query: 163 GTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLL 222
G D G P L L++R+C+L F +F+FDG R +
Sbjct: 56 GGKDEYRGDSP--ELCMLFYRLCRLSRFPFTLLFIFDG----------------RSRPQE 97
Query: 223 ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
+RG +R+ + T Q++ + Q+L+++FG+ A GEAEA+ L H V+TDD+D
Sbjct: 98 KRG--SRMGKSGTHQLAPDFQKLIRIFGMDCREAKGEAEAELGRLNALGHIDAVLTDDAD 155
Query: 283 IWLFGARTVYKN 294
+LFGAR + KN
Sbjct: 156 TFLFGARMLLKN 167
>gi|440470255|gb|ELQ39332.1| DNA-repair protein rad2 [Magnaporthe oryzae Y34]
gi|440487391|gb|ELQ67182.1| DNA-repair protein rad2 [Magnaporthe oryzae P131]
Length = 416
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ + + + L LE ++T
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELARRYQRKQEALEGLEEARETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E ++LL+L G+P+I+AP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNEECRQLLKLMGIPYIIAPTEAEAQCAVLARAGKVFAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|46048490|ref|NP_032025.2| flap endonuclease 1 [Mus musculus]
gi|410025484|ref|NP_001258543.1| flap endonuclease 1 [Mus musculus]
gi|410025486|ref|NP_001258544.1| flap endonuclease 1 [Mus musculus]
gi|16307328|gb|AAH10203.1| Flap structure specific endonuclease 1 [Mus musculus]
gi|26337949|dbj|BAC32660.1| unnamed protein product [Mus musculus]
gi|26347483|dbj|BAC37390.1| unnamed protein product [Mus musculus]
gi|53791234|dbj|BAD52443.1| flap endonuclease 1 [Mus musculus]
gi|74145457|dbj|BAE36169.1| unnamed protein product [Mus musculus]
gi|74150381|dbj|BAE32236.1| unnamed protein product [Mus musculus]
gi|74185061|dbj|BAE39135.1| unnamed protein product [Mus musculus]
gi|148709396|gb|EDL41342.1| flap structure specific endonuclease 1, isoform CRA_c [Mus
musculus]
Length = 380
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERG-- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R Q E G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQEAGME 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|328865755|gb|EGG14141.1| hypothetical protein DFA_11908 [Dictyostelium fasciculatum]
Length = 1098
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIW+H D G PNAHL+G + RI KLL FK++P+FVFDG VP LK++
Sbjct: 27 LAIDASIWIHTFLSSLKDGRGDITPNAHLVGFFWRILKLLTFKVRPIFVFDGSVPFLKQK 86
Query: 209 TISTLEKDRDQ 219
TI K R++
Sbjct: 87 TIDERRKRREK 97
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 227 QTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
Q R +IT + +E ELL +FG+PFI +P EAE+QCA L GV+TDDSDI LF
Sbjct: 775 QIRSVHSITNDILKECHELLSMFGIPFITSPTEAESQCAELYNLGFVDGVVTDDSDILLF 834
Query: 287 GAR---TVYKNFF 296
++ VY+N F
Sbjct: 835 ASQPDMAVYRNLF 847
>gi|318055766|ref|NP_001187811.1| flap endonuclease 1-b [Ictalurus punctatus]
gi|308324033|gb|ADO29152.1| flap endonuclease 1-b [Ictalurus punctatus]
Length = 380
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLL---ERGKQ 227
+HL+G+++R ++L IKPV+VFDG PQLK + + R ++LL E G+Q
Sbjct: 61 TSHLMGMFYRTIRMLDSGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQEMGEQ 120
Query: 228 ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
++ +T+Q + E ++LL L GVP+I AP EAEA CA+L T+D
Sbjct: 121 ENIDKFSKRLVKVTKQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKAYATATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG + ++
Sbjct: 181 DGLTFGTSVLLRHL 194
>gi|50556476|ref|XP_505646.1| YALI0F20042p [Yarrowia lipolytica]
gi|74632421|sp|Q6C116.1|FEN1_YARLI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|49651516|emb|CAG78455.1| YALI0F20042p [Yarrowia lipolytica CLIB122]
Length = 389
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 29/173 (16%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q G + N +HL+G+++R +++ IKPV+VFDG P L
Sbjct: 34 DASMSLYQFVIAVRQADGQQLTNENGETTSHLMGMFYRTLRMVDNGIKPVYVFDGKPPVL 93
Query: 206 KKQTISTLEKDRDQLLL------------ERGKQTRLAST-----------ITEQMSREA 242
K ++ ++ R++ L E G++T+ A +T + + EA
Sbjct: 94 KSGELAKRKERREEALKKIEELKQQVEDGEEGEETKEAQEDVTRFEKRTVRVTPEQNDEA 153
Query: 243 QELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
++LL L G+P + AP EAEAQCA L ++D D FG+ + ++
Sbjct: 154 KKLLTLMGIPIVEAPCEAEAQCAKLAEAGKVYAAASEDMDTLCFGSPVLLRHL 206
>gi|330914981|ref|XP_003296859.1| hypothetical protein PTT_07066 [Pyrenophora teres f. teres 0-1]
gi|311330789|gb|EFQ95031.1| hypothetical protein PTT_07066 [Pyrenophora teres f. teres 0-1]
Length = 342
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS------TLEKDRDQLLLERG-- 225
+HL+GL++R +++ IKP++VFDG P+LK ++ T + E G
Sbjct: 8 TSHLMGLFYRTMRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKTEAHAAAEEAKETGTA 67
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K +R +T + + E Q LL+L G+P+IVAP EAEAQCA+L G ++D
Sbjct: 68 EDVEKFSRRTVRVTREHNEECQRLLKLMGIPYIVAPTEAEAQCAALARGGKVYAAASEDM 127
Query: 282 DIWLF 286
D F
Sbjct: 128 DTLTF 132
>gi|50309395|ref|XP_454705.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643840|emb|CAG99792.1| KLLA0E16743p [Kluyveromyces lactis]
Length = 671
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 149 LISDVSIWLHQLTKGTH-DLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK 207
L D WLH+ +LA + +L RI L FKI P FVFDG Q+KK
Sbjct: 27 LAIDGYAWLHRSAHSCAMELAMDQPTDKYLQFFIKRISMLRHFKITPFFVFDGDSIQVKK 86
Query: 208 QT-ISTLEKDRDQ-----LLLERGKQTRLAS-------TITEQMSREAQELLQLFGVPFI 254
+T + EK ++ L E G + RLA +IT M++ E LQ+ +P++
Sbjct: 87 ETELKRAEKRKENREKAHALFEAGDR-RLAYDYFQKCVSITPDMAKCVIEYLQMNSIPYV 145
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
VAP EA+AQ LE QG+I++DSD+ +FG
Sbjct: 146 VAPYEADAQMVYLEKQGLVQGIISEDSDLLVFGC 179
>gi|240278973|gb|EER42479.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 772
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 22/150 (14%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGG-VPQLKKQTI 210
D+SIWL Q+ G GG+ N L L++R+ +L + P+F++DG PQ K
Sbjct: 38 DISIWLFQVQAG----KGGT--NPELRTLFYRLVRLTGLPVHPLFIYDGPQRPQYK---- 87
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
R +L+ + L I R ++ L+ LF P APGEAEA+CA L+
Sbjct: 88 ------RGKLIDRNNRAGDLGRII-----RRSKHLIDLFRFPHHTAPGEAEAECARLQTS 136
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKS 300
V++DD D +FG++ NF + S
Sbjct: 137 GVVDAVMSDDVDAIMFGSKVTIMNFSKESS 166
>gi|24658219|ref|NP_647943.2| XPG-like endonuclease [Drosophila melanogaster]
gi|74870583|sp|Q9VRJ0.1|GEN_DROME RecName: Full=Flap endonuclease GEN; AltName: Full=Flap
structure-specific endonuclease GEN; AltName:
Full=Xpg-like endonuclease; Short=DmGEN
gi|7295491|gb|AAF50805.1| XPG-like endonuclease [Drosophila melanogaster]
gi|21711755|gb|AAM75068.1| RE33588p [Drosophila melanogaster]
gi|220949066|gb|ACL87076.1| Gen-PA [synthetic construct]
Length = 726
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 173 PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAS 232
P HL L+ R C L++ ++ PVFV +G P+LK Q I+ R++L RG + + +
Sbjct: 48 PRHHLKNLFFRTCYLIWEQVTPVFVLEGVAPKLKSQVIAK----RNELQF-RGVKPKNSP 102
Query: 233 TITE--------------QMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
T+ + ++ + LL G+ + PGEAEA CA L GVI+
Sbjct: 103 ECTQSQPSKGDKGRSRFNHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVIS 162
Query: 279 DDSDIWLFGARTVYKNF 295
DSD + +GA VY+NF
Sbjct: 163 QDSDCFAYGAVRVYRNF 179
>gi|283481241|emb|CAZ69357.1| putative endonuclease [Emiliania huxleyi virus 99B1]
Length = 358
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 155 IWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLE 214
I + Q G + G V +HL G+++R +L+ IKPV+VFDG P LKK+ +
Sbjct: 44 IAIRQGPSGQLAASEGEV-TSHLTGIFYRTIRLIEAGIKPVYVFDGKPPVLKKKELDKRN 102
Query: 215 KDRDQLL---------LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCA 265
+ + L E KQ + + T + S E +++L L G+P + AP EAEA CA
Sbjct: 103 ERQAHALSELKLTDDATEVEKQEKRSVRATREHSEEVKKMLTLMGIPVVQAPCEAEATCA 162
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVYKNFFD---KKSHVLRYTAPDI 310
+ T+D D FG+ V ++ KK + Y+ P+I
Sbjct: 163 AYVKTGKAYATATEDMDSLTFGSTYVIRHINSTDQKKQPTVEYSLPNI 210
>gi|294867245|ref|XP_002765023.1| flap exonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239864903|gb|EEQ97740.1| flap exonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 407
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 13/142 (9%)
Query: 168 AGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIST---LEKDRDQLL--- 221
A G V +H+ G+ R +++ IKPV+VFDG P LK ++ ++K ++ L
Sbjct: 60 AAGEV-TSHISGMVTRTLRMMEAGIKPVYVFDGKPPSLKTGELAKRREVKKKAEEDLKEA 118
Query: 222 LERG------KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQG 275
+E+G K ++ +T QM+ + ++LL + G I AP EAEA CA+L G
Sbjct: 119 IEKGDDEGIRKAAHRSTRVTPQMNADVKKLLTMMGCCIIEAPEEAEATCAALVRYGKCYG 178
Query: 276 VITDDSDIWLFGARTVYKNFFD 297
+TDD D+ FG+ KN F+
Sbjct: 179 AVTDDMDVLTFGSPVQVKNLFN 200
>gi|189191944|ref|XP_001932311.1| DNA-repair protein rad2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973917|gb|EDU41416.1| DNA-repair protein rad2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 395
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS------TLEKDRDQLLLERG-- 225
+HL+GL++R +++ IKP++VFDG P+LK ++ T + E G
Sbjct: 61 TSHLMGLFYRTMRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKTEAHAAAEEAKETGTA 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K +R +T + + E Q LL+L G+P+IVAP EAEAQCA+L G ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNEECQRLLKLMGIPYIVAPTEAEAQCAALARGGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLTF 185
>gi|16758170|ref|NP_445882.1| flap endonuclease 1 [Rattus norvegicus]
gi|8896169|gb|AAF81265.1|AF281018_1 flag structure-specific endonuclease [Rattus norvegicus]
Length = 380
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERG-- 225
+HL+G+++R +++ IKPV++FDG PQLK ++ + R Q E G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYIFDGKPPQLKSAQLAKRSERRAEAEKQLQQAQEAGAE 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|325090233|gb|EGC43543.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 827
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 22/150 (14%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGG-VPQLKKQTI 210
D+SIWL Q+ G GG+ N L L++R+ +L + P+F++DG PQ K
Sbjct: 38 DISIWLFQVQAG----KGGT--NPELRTLFYRLVRLTGLPVHPLFIYDGPQRPQYK---- 87
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
R +L+ + L I R ++ L+ LF P APGEAEA+CA L+
Sbjct: 88 ------RGKLIDRNNRAGDLGRII-----RRSKHLIDLFRFPHHTAPGEAEAECARLQTS 136
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKS 300
V++DD D +FG++ NF + S
Sbjct: 137 GVVDAVMSDDVDAIMFGSKVTIMNFSKESS 166
>gi|5679043|gb|AAD46833.1|AF160893_1 GM10765p [Drosophila melanogaster]
gi|28460669|dbj|BAC57447.1| xpg like endonuclease [Drosophila melanogaster]
Length = 726
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 173 PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAS 232
P HL L+ R C L++ ++ PVFV +G P+LK Q I+ R++L RG + + +
Sbjct: 48 PRHHLKNLFFRTCYLIWEQVTPVFVLEGVAPKLKSQVIAK----RNELQF-RGVKPKNSP 102
Query: 233 TITE--------------QMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
T+ + ++ + LL G+ + PGEAEA CA L GVI+
Sbjct: 103 ECTQSQPSKGDKGRSRFNHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVIS 162
Query: 279 DDSDIWLFGARTVYKNF 295
DSD + +GA VY+NF
Sbjct: 163 QDSDCFAYGAVRVYRNF 179
>gi|320590957|gb|EFX03398.1| DNA-repair protein rad2 [Grosmannia clavigera kw1407]
Length = 856
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 67/126 (53%), Gaps = 14/126 (11%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS--TLEKDRDQLLLERGKQTRLA 231
+HL+G+++R +++ IKP++VFDG P+LK ++ + K LE K+T A
Sbjct: 523 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELARRYMRKQEATEGLEEAKETGTA 582
Query: 232 STITEQMSR-----------EAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDD 280
I E+ SR E Q LL+L G+PFIVAP EAEAQCA L ++D
Sbjct: 583 EDI-EKFSRRTVRVTREHNTECQRLLKLMGIPFIVAPTEAEAQCAELARAGKVYAAASED 641
Query: 281 SDIWLF 286
D F
Sbjct: 642 MDTLCF 647
>gi|154276716|ref|XP_001539203.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414276|gb|EDN09641.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 826
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 22/150 (14%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGG-VPQLKKQTI 210
D+SIWL Q+ G GG+ N L L++R+ +L + P+F++DG PQ K+ +
Sbjct: 39 DISIWLFQVQAG----KGGT--NPELRTLFYRLVRLTGLPVHPLFIYDGPQRPQYKRGKL 92
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
DR+ + + G+ + R ++ L+ LF P APGEAEA+CA L+
Sbjct: 93 I----DRNNRVGDLGR-----------IIRRSKHLIDLFHFPHHTAPGEAEAECARLQSS 137
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKS 300
V++DD D +FG++ NF + S
Sbjct: 138 GVVDAVMSDDVDAIMFGSKVTIMNFSKENS 167
>gi|225560221|gb|EEH08503.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 827
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 22/150 (14%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGG-VPQLKKQTI 210
D+SIWL Q+ G GG+ N L L++R+ +L + P+F++DG PQ K
Sbjct: 38 DISIWLFQVQAG----KGGT--NPELRTLFYRLVRLTGLPVHPLFIYDGPQRPQYK---- 87
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
R +L+ + L I R ++ L+ LF P APGEAEA+CA L+
Sbjct: 88 ------RGKLIDRNNRAGDLGRII-----RRSKHLIDLFRFPHHTAPGEAEAECARLQTS 136
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKS 300
V++DD D +FG++ NF + S
Sbjct: 137 GVVDAVMSDDVDAIMFGSKVTIMNFSKESS 166
>gi|358394482|gb|EHK43875.1| hypothetical protein TRIATDRAFT_300264 [Trichoderma atroviride IMI
206040]
Length = 395
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ + + + LE K+T
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q LL+L G+P+I+AP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|452004834|gb|EMD97290.1| hypothetical protein COCHEDRAFT_1220743 [Cochliobolus
heterostrophus C5]
Length = 395
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS------TLEKDRDQLLLERG-- 225
+HL+GL++R +++ IKP++VFDG P+LK ++ T + + E G
Sbjct: 61 TSHLMGLFYRTMRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKTEAQAAAEEAKETGTA 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K +R +T++ + E Q LL+L G+P+I+AP EAEAQCA+L G ++D
Sbjct: 121 EDVEKFSRRTVRVTKEHNAECQRLLKLMGIPYIIAPTEAEAQCAALAKGGKVYAAASEDM 180
Query: 282 DIWLFGA 288
D F +
Sbjct: 181 DTLTFAS 187
>gi|358385848|gb|EHK23444.1| hypothetical protein TRIVIDRAFT_37094 [Trichoderma virens Gv29-8]
Length = 395
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ + + + LE K+T
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q LL+L G+P+I+AP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|389637772|ref|XP_003716519.1| DNA-repair protein rad2 [Magnaporthe oryzae 70-15]
gi|317374924|sp|A4QS18.2|FEN1_MAGO7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|351642338|gb|EHA50200.1| DNA-repair protein rad2 [Magnaporthe oryzae 70-15]
Length = 394
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ + + + L LE ++T
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELARRYQRKQEALEGLEEARETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E ++LL+L G+P+I+AP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNEECRQLLKLMGIPYIIAPTEAEAQCAVLARAGKVFAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|449019441|dbj|BAM82843.1| probable excision repair protein ERCC5 [Cyanidioschyzon merolae
strain 10D]
Length = 1117
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 55/92 (59%)
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E D +L E R A ++TEQM + + LLQL G+P+I A EAEAQCA L+
Sbjct: 743 EMDLAKLRSEYAAAARHADSVTEQMFADTKRLLQLLGIPYIEAAMEAEAQCAFLDRAGIV 802
Query: 274 QGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
V+T+DSD +LFGA VY++ F+ +V Y
Sbjct: 803 DAVVTEDSDAFLFGASRVYRHIFEDSKYVEEY 834
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 152 DVSIWLHQLTKGTHDL-AGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D SIWL+Q + D A +V NAHL+G++ R CKLL++ I+ VFVFDGGVP LK
Sbjct: 30 DASIWLNQFVRAVRDTEAMTTVRNAHLLGIFRRCCKLLYYGIEAVFVFDGGVPSLK 85
>gi|367047833|ref|XP_003654296.1| hypothetical protein THITE_2117171 [Thielavia terrestris NRRL 8126]
gi|347001559|gb|AEO67960.1| hypothetical protein THITE_2117171 [Thielavia terrestris NRRL 8126]
Length = 359
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTL--EKDRDQLLLERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ K LE K+T
Sbjct: 25 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELARRFQRKQEANEGLEEAKETGTA 84
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T++ + E Q LL+L G+P+IVAP EAEAQCA L ++D
Sbjct: 85 EDVEKFSRRTVRVTKEHNAECQRLLRLMGIPYIVAPTEAEAQCAVLARAGKVYAAASEDM 144
Query: 282 DIWLF 286
D F
Sbjct: 145 DTLCF 149
>gi|392577233|gb|EIW70362.1| hypothetical protein TREMEDRAFT_43101 [Tremella mesenterica DSM
1558]
Length = 1306
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 229 RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
R A IT M + Q LL+ FG+P+I AP EAEAQCA L G+ITDDSD++LFG
Sbjct: 897 RDADEITAPMIAQIQTLLRHFGIPYITAPMEAEAQCAKLATLGLVDGIITDDSDVFLFGG 956
Query: 289 RTVYKNFFDKKSHVLRYTAPDIR 311
+KN F+ +V + + DI+
Sbjct: 957 NQCFKNIFNDSKYVECFLSSDIQ 979
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIWL+Q D G + NAH++G RI KLLF IKPVFVFDGG P LK+
Sbjct: 27 LAIDSSIWLYQFQATMRDKDGRVLVNAHVLGFLRRINKLLFHGIKPVFVFDGGAPVLKRN 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTI-TEQMSREAQELLQ 247
TI+ ++ + R+A + QM REA + Q
Sbjct: 87 TIAERKRRKAGAA---ANHARMAEKLFAAQMRREAVKAAQ 123
>gi|302900157|ref|XP_003048206.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|317374915|sp|C7Z125.1|FEN1_NECH7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|256729138|gb|EEU42493.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 395
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQTRLA 231
+HL+G+++R +++ IKP++VFDG P+LK ++ + + + LE K+T A
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGTA 120
Query: 232 STI----------TEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
I T + + E Q LL+L G+P+I+AP EAEAQCA L ++D
Sbjct: 121 EDIEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLAQAGKVYAAASEDM 180
Query: 282 DIWLFGA 288
D F +
Sbjct: 181 DTLCFNS 187
>gi|198417766|ref|XP_002129714.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 380
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 63/126 (50%), Gaps = 14/126 (11%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGK------- 226
+H+ GL++R +LL IKPVFVFDG PQ+K ++ + R+Q E K
Sbjct: 61 TSHIAGLFYRTIRLLGNGIKPVFVFDGKPPQMKSGELAKRAERREQAEKELAKAQESGEA 120
Query: 227 ------QTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDD 280
RL E M + ++LL+L G+P + AP EAEAQCASL T+D
Sbjct: 121 ADVEKYSRRLVKVTREHMD-DCKKLLRLMGIPVVEAPTEAEAQCASLVKSGKVYATATED 179
Query: 281 SDIWLF 286
D F
Sbjct: 180 MDALTF 185
>gi|195441676|ref|XP_002068629.1| GK20322 [Drosophila willistoni]
gi|194164714|gb|EDW79615.1| GK20322 [Drosophila willistoni]
Length = 722
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 18/137 (13%)
Query: 173 PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLL------ERGK 226
P HL L+ R C L++ ++ PVFV +G P+LK Q I+ R++L + G
Sbjct: 48 PRHHLKNLFFRTCYLIWEQVTPVFVLEGVAPKLKSQVIAK----RNELQFRGVKPKDSGS 103
Query: 227 QTRLASTITEQMSR--------EAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
+ + T++ R + + LL G+ + PGEAEA CA L GVI+
Sbjct: 104 SNKENTDKTKEKGRTRFNHVLKQCENLLISMGIQCVQGPGEAEAYCAFLNKHGLVDGVIS 163
Query: 279 DDSDIWLFGARTVYKNF 295
DSD + +GA VY+NF
Sbjct: 164 QDSDCFAYGAVRVYRNF 180
>gi|196004300|ref|XP_002112017.1| hypothetical protein TRIADDRAFT_24563 [Trichoplax adhaerens]
gi|317376198|sp|B3RVF0.1|FEN1_TRIAD RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190585916|gb|EDV25984.1| hypothetical protein TRIADDRAFT_24563 [Trichoplax adhaerens]
Length = 377
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 22/169 (13%)
Query: 139 NIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVF 198
++ I + L+ + SD ++ ++ + T +HL+GL++R +++ IKPV+VF
Sbjct: 36 SMSIYQFLIAVRSDGNVLTNEAGETT----------SHLMGLFYRTIRMMENGIKPVYVF 85
Query: 199 DGGVPQLKKQTISTLEKDRDQLLLERG------------KQTRLASTITEQMSREAQELL 246
DG P+LK ++ ++ R++ + K TR +T + E ++LL
Sbjct: 86 DGKPPRLKSGELARRQERREEAQKQASEAEKEGDADNIDKFTRRTVRMTPEHCEEGKKLL 145
Query: 247 QLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
+L GVP + AP EAE+QCA+L T+D D FG+ + ++
Sbjct: 146 KLMGVPVVQAPCEAESQCAALVKAGKVYATGTEDMDALTFGSNVMLRHL 194
>gi|388583596|gb|EIM23897.1| PIN domain-like protein [Wallemia sebi CBS 633.66]
Length = 433
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI-STLEKDRDQL-LLERGKQTRLA 231
+HL+G ++R +++ IKP +VFDG P LK + S EK D E K+T A
Sbjct: 62 TSHLMGFFYRTLRMVDNGIKPCYVFDGKPPDLKSNVLKSRFEKREDATEQGEEAKETGDA 121
Query: 232 STI----------TEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
TI T++ + E ++LL+L G+P + AP EAEAQCA L G ++D
Sbjct: 122 ETIDRLSRRTVRVTKEHNMECRKLLRLMGIPVVEAPSEAEAQCAELVRGGKVWAAGSEDM 181
Query: 282 DIWLFGA 288
D FGA
Sbjct: 182 DTLTFGA 188
>gi|242091235|ref|XP_002441450.1| hypothetical protein SORBIDRAFT_09g026950 [Sorghum bicolor]
gi|317374865|sp|C5YUK3.1|FEN11_SORBI RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A
gi|241946735|gb|EES19880.1| hypothetical protein SORBIDRAFT_09g026950 [Sorghum bicolor]
Length = 380
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 12/139 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------LERG-- 225
+HL G+++R +LL IKPV+VFDG P +KK+ ++ R+ +E G
Sbjct: 62 TSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDMKKEELAKRFSKREDATNDLKEAVEAGDK 121
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K ++ +T Q + + + LL+L GVP + AP EAEA+CA+L + V ++D
Sbjct: 122 DAVEKLSKRTVKVTAQHNDDCKRLLRLMGVPVVEAPSEAEAECAALCKNDKVFAVASEDM 181
Query: 282 DIWLFGARTVYKNFFDKKS 300
D FGA ++ D S
Sbjct: 182 DSLTFGAPRFLRHLMDPSS 200
>gi|336383338|gb|EGO24487.1| hypothetical protein SERLADRAFT_467880 [Serpula lacrymans var.
lacrymans S7.9]
Length = 413
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 229 RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
R + IT+QM + LL+LFG+P+I AP EAEAQCA L G+ITDDSD++LFG
Sbjct: 2 RDSEDITQQMISQIMLLLRLFGIPYITAPMEAEAQCAELVSLGLVDGIITDDSDVFLFGG 61
Query: 289 RTVYKNFFDKKSHV 302
+ V+KN F++ V
Sbjct: 62 QRVFKNMFNQSKTV 75
>gi|242398519|ref|YP_002993943.1| Flap structure-specific endonuclease [Thermococcus sibiricus MM
739]
gi|259645975|sp|C6A1U9.1|FEN_THESM RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|242264912|gb|ACS89594.1| Flap structure-specific endonuclease [Thermococcus sibiricus MM
739]
Length = 340
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------LERG-- 225
+HL GL++R L+ IKP +VFDG P+ KK+ + + R++ L L RG
Sbjct: 55 TSHLSGLFYRTINLMEAGIKPAYVFDGKPPEFKKKELEKRAETREEALEKWEIALARGEL 114
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K + AS I E + +A++LL+L G+P++ AP E EAQ A + + D
Sbjct: 115 EEAKKYAQRASKINEILIEDAKKLLELMGIPWVQAPSEGEAQAAYMASKGDVWASASQDY 174
Query: 282 DIWLFGARTVYKNF 295
D LFG + +N
Sbjct: 175 DSLLFGTPKLVRNL 188
>gi|340052549|emb|CCC46830.1| putative flap endonuclease-1 (FEN-1), fragment [Trypanosoma vivax
Y486]
Length = 393
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 70/130 (53%), Gaps = 18/130 (13%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK--------------QTISTLEKDRDQ 219
+HL GL+ R +++ ++P++VFDG P LK Q +++ D
Sbjct: 65 TSHLNGLFFRTLRMVDEGLRPIYVFDGKAPTLKSKELQNRRQKADDAIQKFKKAQEEGDA 124
Query: 220 LLLER-GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
++E+ GK+T +T++ EA++LLQL G+P + AP EAEAQCA L N V T
Sbjct: 125 EMMEKMGKRT---VRLTQEQMEEAKKLLQLMGIPVVQAPSEAEAQCAELVKKNKAWAVGT 181
Query: 279 DDSDIWLFGA 288
+D D FGA
Sbjct: 182 EDMDALTFGA 191
>gi|311247497|ref|XP_003122676.1| PREDICTED: flap endonuclease 1-like isoform 2 [Sus scrofa]
Length = 393
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ------------LL 221
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R +
Sbjct: 74 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAG 133
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K T+ +T+Q + E + LL L GVP++ AP EAEA CA+L T+D
Sbjct: 134 EEVEKFTKRLVKVTKQHNDECKHLLSLMGVPYLDAPSEAEASCAALVKAGKVYAAATEDM 193
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 194 DCLTFGSPVLMRHL 207
>gi|20071071|gb|AAH27295.1| Fen1 protein [Mus musculus]
Length = 380
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERG-- 225
+HL+G+++R +++ +KPV+VFDG PQLK ++ + R Q E G
Sbjct: 61 TSHLMGMFYRTIRMMENGVKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQEAGME 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|317376191|sp|B9EMY6.1|FEN1_SALSA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|221220444|gb|ACM08883.1| Flap endonuclease 1-B [Salmo salar]
gi|221221934|gb|ACM09628.1| Flap endonuclease 1-B [Salmo salar]
Length = 380
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLL---ERGKQ 227
+HL+G+++R ++L IKPV+VFDG PQLK + + R ++LL E G+Q
Sbjct: 61 TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQEAGEQ 120
Query: 228 ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
++ +T+Q + E ++LL L GVP+I AP EAEA CA+L T+D
Sbjct: 121 ENIDKFSKRLVKVTQQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG + ++
Sbjct: 181 DGLTFGTGVLLRHL 194
>gi|116203453|ref|XP_001227537.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88175738|gb|EAQ83206.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 378
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTL--EKDRDQLLLERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ K LE K+T
Sbjct: 44 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEANEGLEEAKETGTA 103
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q LL+L G+P+I+AP EAEAQCA L ++D
Sbjct: 104 EDVEKFSRRTVRVTREHNEECQRLLKLMGIPYILAPTEAEAQCAVLARAGKVYAAASEDM 163
Query: 282 DIWLF 286
D F
Sbjct: 164 DTLCF 168
>gi|340500548|gb|EGR27416.1| hypothetical protein IMG5_195980 [Ichthyophthirius multifiliis]
Length = 989
Score = 77.4 bits (189), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 218 DQLLLERGKQTRLASTITEQMS---REAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQ 274
+QL +E K L +E + ++ ++LL LFG+P++ +P EAEAQCA LE+
Sbjct: 640 EQLEIESQKFINLNEINSETIQFKFQQIKQLLILFGIPWVESPSEAEAQCAFLEMHQLVD 699
Query: 275 GVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
G++TDDSD++LFG R VY+N F + S +RY
Sbjct: 700 GIVTDDSDVFLFGGRKVYRNLFSQNSQYVRY 730
Score = 62.0 bits (149), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 44/70 (62%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L DVSIW+ +L G+ + N HLI ++ R+CKLL IKPVFVFDG P+LKK
Sbjct: 27 LAIDVSIWVLRLIYGSLQSKNENFKNIHLICIFKRLCKLLSLGIKPVFVFDGQPPELKKN 86
Query: 209 TISTLEKDRD 218
T+ +K R+
Sbjct: 87 TLYQRQKMRE 96
>gi|81883819|sp|Q5XIP6.1|FEN1_RAT RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|53733451|gb|AAH83630.1| Fen1 protein [Rattus norvegicus]
gi|149062370|gb|EDM12793.1| flap structure-specific endonuclease 1 [Rattus norvegicus]
Length = 380
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERG-- 225
+HL+G+++R +++ IKPV++FDG PQLK ++ + R Q E G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYIFDGKPPQLKSGELAKRSERRAEAEKQLQQAQEAGAE 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|340518918|gb|EGR49158.1| Rad27p/FEN-1 endonuclease-like protein [Trichoderma reesei QM6a]
Length = 395
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ + + + LE K+T
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q LL+L G+P+I+AP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|195626660|gb|ACG35160.1| XPG I-region family protein [Zea mays]
Length = 688
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 19/173 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI- 210
D+S WL Q A +L L+HRI L+ +FV DG +P +K T
Sbjct: 30 DLSCWLVQFCSANRSPAF-LRDKVYLKNLFHRIRALIALNCSLIFVSDGAIPSVKLATYR 88
Query: 211 ---------STLEKDRDQLL--LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGE 259
+T E+ Q L L R K + + +M +EA+ L G+P + E
Sbjct: 89 RRLGLNAAEATREEANSQPLTSLRRNKSSEFS-----RMIKEAKHLGLALGIPCLDGMEE 143
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKN-FFDKKSHVLRYTAPDIR 311
AEAQCA L + G T DSD +LFGA+T Y++ F + +V+ Y DI+
Sbjct: 144 AEAQCALLNFSSLCDGCFTSDSDSFLFGAKTFYRDVFIGEGGYVICYEMEDIQ 196
>gi|154339662|ref|XP_001565788.1| putative flap endonuclease-1 (FEN-1) [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|317374905|sp|A4HFE4.1|FEN1_LEIBR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|134063106|emb|CAM45304.1| putative flap endonuclease-1 (FEN-1) [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 395
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 25/167 (14%)
Query: 152 DVSIWLHQLT---KGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGV 202
D S+ ++Q KG D G + N +HL GL+ R +++ IKP++VFDG
Sbjct: 34 DASMSIYQFIIAMKGFQDGQGMELTNEQGDVTSHLNGLFARTLRMIDEGIKPIYVFDGKP 93
Query: 203 PQLKKQTIST-----------LEKDRDQL---LLERGKQTRLASTITEQMSREAQELLQL 248
P+LK + T EK +D ++E K ++ ++ + E+++LLQL
Sbjct: 94 PKLKADELETRRQKAAEAEREFEKAKDAGDDEMME--KMSKRTVRVSREQIEESKKLLQL 151
Query: 249 FGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
GVP I AP EAEAQCA L V T+D D FG+ + ++
Sbjct: 152 MGVPVIQAPSEAEAQCAELVKKGKAWAVGTEDMDALTFGSTVMLRHL 198
>gi|212544870|ref|XP_002152589.1| Flap endonuclease Rad27, putative [Talaromyces marneffei ATCC
18224]
gi|210065558|gb|EEA19652.1| Flap endonuclease Rad27, putative [Talaromyces marneffei ATCC
18224]
Length = 411
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 22/169 (13%)
Query: 132 SMLEFRCNIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFK 191
++ E+R ++ I L+ + SD G ++ +HL+G+++R +++
Sbjct: 45 NIAEYRISMSIYSFLIAVRSD----------GQQLMSEAGETTSHLMGMFYRTLRIVDNG 94
Query: 192 IKPVFVFDGGVPQLKKQTIS--TLEKDRDQLLLERGKQT----------RLASTITEQMS 239
IKP++VFDG P++K ++ + K E K+T R +T + +
Sbjct: 95 IKPLYVFDGAPPKMKGGELAKRSARKREAHEAHEEAKETGTAEDMEKFSRRTVRVTREHN 154
Query: 240 REAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
E ++LL+L GVP+I AP EAEAQCA L ++D D F A
Sbjct: 155 EECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEA 203
>gi|194866945|ref|XP_001971974.1| GG14140 [Drosophila erecta]
gi|190653757|gb|EDV51000.1| GG14140 [Drosophila erecta]
Length = 726
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 173 PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAS 232
P HL L+ R C L++ ++ PVFV +G P+LK Q I+ R++L RG + + +
Sbjct: 48 PRHHLKNLFFRTCYLIWEQVTPVFVLEGVAPKLKSQVIAK----RNELQF-RGVKPKNSP 102
Query: 233 TITEQMS--------------REAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
++ + ++ + LL G+ + PGEAEA CA L GVI+
Sbjct: 103 ECSQSQAPKGDKGRSRFNHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVIS 162
Query: 279 DDSDIWLFGARTVYKNF 295
DSD + +GA VY+NF
Sbjct: 163 QDSDCFAYGAIRVYRNF 179
>gi|301117906|ref|XP_002906681.1| flap endonuclease 1 [Phytophthora infestans T30-4]
gi|317374909|sp|D0MY34.1|FEN1_PHYIT RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|262108030|gb|EEY66082.1| flap endonuclease 1 [Phytophthora infestans T30-4]
Length = 389
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 73/166 (43%), Gaps = 22/166 (13%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNA----------HLIGLYHRICKLLFFKIKPVFVFDGG 201
D S+ L+Q GG A HL G++ R +++ +KPV+VFDG
Sbjct: 35 DASMALYQFLIAIRSADGGGPSQALTNADGEVTSHLQGMFSRTIRMMENGLKPVYVFDGK 94
Query: 202 VPQLKKQTISTLEKDRD--QLLLERGKQTRLASTI----------TEQMSREAQELLQLF 249
P +K ++ R Q LE + A I T Q + + +ELL+L
Sbjct: 95 PPVMKSGELAKRSDRRQEAQKALEEATEKGNAEDIDRFNKRLVRATPQHNEDCKELLRLM 154
Query: 250 GVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
GVP I AP EAEA CA+L G T+D D FG +Y+
Sbjct: 155 GVPHITAPCEAEASCAALAKGGRVYAAGTEDMDALTFGVPVLYRRL 200
>gi|354503001|ref|XP_003513570.1| PREDICTED: flap endonuclease 1-like [Cricetulus griseus]
Length = 380
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERG-- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R Q E G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQEAGVE 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|410074109|ref|XP_003954637.1| hypothetical protein KAFR_0A00640 [Kazachstania africana CBS 2517]
gi|372461219|emb|CCF55502.1| hypothetical protein KAFR_0A00640 [Kazachstania africana CBS 2517]
Length = 379
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 17/156 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q GG + +HL+G+++R +++ IKP +VFDG P L
Sbjct: 34 DASMSLYQFLIAVRQQDGGQLATDSGETTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPVL 93
Query: 206 KKQTISTLEKDRDQL---------LLERGKQTRLASTITEQMSREAQELLQLFGVPFIVA 256
K +S R++ + E+ K R ++++ + EA++LL+L G+P++ A
Sbjct: 94 KSHELSKRTARREETTKKLDEATDIAEKIKHERRLVKVSKEHNDEAKKLLELMGIPYVNA 153
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVY 292
P EAEAQCA L ++D D + RT Y
Sbjct: 154 PCEAEAQCAELAKVGKVYAAASEDMDTLCY--RTPY 187
>gi|311247499|ref|XP_003122675.1| PREDICTED: flap endonuclease 1-like isoform 1 [Sus scrofa]
Length = 380
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ------------LL 221
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAG 120
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K T+ +T+Q + E + LL L GVP++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGVPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|348540973|ref|XP_003457961.1| PREDICTED: flap endonuclease 1-like [Oreochromis niloticus]
Length = 380
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLL---ERGKQ 227
+HL+G+++R ++L IKPV+VFDG PQLK + + R +++L E G+Q
Sbjct: 61 TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSAELEKRGERRAEAEKMLAQAQEIGEQ 120
Query: 228 ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
T+ +T+Q + E ++LL L GVP+I AP EAEA CA+L T+D
Sbjct: 121 ENIDKFTKRLVKVTKQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG + ++
Sbjct: 181 DGLTFGTNILLRHL 194
>gi|313217057|emb|CBY38243.1| unnamed protein product [Oikopleura dioica]
gi|313224508|emb|CBY20298.1| unnamed protein product [Oikopleura dioica]
Length = 538
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 44/67 (65%)
Query: 229 RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
++ S ++Q+ ++A E+L LFG APGEAEAQCA E+ N TQG ITDD D +LFG
Sbjct: 300 KITSVPSQQLYKDAAEMLTLFGCGVFFAPGEAEAQCAEFEMTNITQGTITDDGDTFLFGG 359
Query: 289 RTVYKNF 295
R V K
Sbjct: 360 RIVIKGL 366
>gi|303317440|ref|XP_003068722.1| XPG family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240108403|gb|EER26577.1| XPG family protein [Coccidioides posadasii C735 delta SOWgp]
Length = 789
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 24/145 (16%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDG-GVPQLKKQTI 210
DVSIWL Q L N L L++R+ +L+ + P+FVFDG G P+ K
Sbjct: 38 DVSIWLFQAQAAQGGL------NPELRALFYRLARLISLPVHPIFVFDGSGRPEYK---- 87
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
R +L++ G+ A I R ++ L++LFG APGEAEA+CA L+
Sbjct: 88 ------RGKLVIRNGRSG--AWNI-----RSSKRLIELFGFQHHDAPGEAEAECAKLQTM 134
Query: 271 NHTQGVITDDSDIWLFGARTVYKNF 295
+++D D +FG++ + NF
Sbjct: 135 GIVDAAMSNDIDTVMFGSKITFMNF 159
>gi|294893362|ref|XP_002774434.1| flap exonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239879827|gb|EER06250.1| flap exonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 407
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 13/142 (9%)
Query: 168 AGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIST---LEKDRDQLL--- 221
A G V +H+ G+ R +++ IKPV+VFDG P LK ++ ++K ++ L
Sbjct: 60 AAGEV-TSHISGMVTRTLRMMEAGIKPVYVFDGKPPSLKTGELAKRREVKKKAEEDLKEA 118
Query: 222 LERG------KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQG 275
+E+G K ++ +T QM+ + ++LL + G I AP EAEA CA+L G
Sbjct: 119 IEKGDDEGIRKAAHRSTRVTLQMNADVKKLLTMMGCCIIEAPEEAEATCAALVRYGKCYG 178
Query: 276 VITDDSDIWLFGARTVYKNFFD 297
+TDD D+ FG+ KN F+
Sbjct: 179 AVTDDMDVLTFGSPVQIKNLFN 200
>gi|20092799|ref|NP_618874.1| flap endonuclease-1 [Methanosarcina acetivorans C2A]
gi|28380016|sp|Q8TIY5.1|FEN_METAC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|19918097|gb|AAM07354.1| FlaP endonuclease-1 [Methanosarcina acetivorans C2A]
Length = 338
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL-----------L 222
+HL GL +R L+ IKPVF+FDG P LK +T+S ++ R+ L L
Sbjct: 55 TSHLSGLLYRTASLVEAGIKPVFIFDGKPPDLKSETLSRRKEVRETSLEKWENAKAEGDL 114
Query: 223 ERG-KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K + +S + +++ +++ LL + G+P+I AP E EAQ A + L V + D
Sbjct: 115 EAAYKYAQASSRVDQEIVEDSKYLLGIMGIPWIQAPCEGEAQAAHMVLKKDADYVASQDY 174
Query: 282 DIWLFGARTVYKNF 295
D +LFGA V +N
Sbjct: 175 DSFLFGAPKVVRNM 188
>gi|290559766|gb|EFD93090.1| XPG I domain protein [Candidatus Parvarchaeum acidophilus ARMAN-5]
Length = 332
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 17/155 (10%)
Query: 156 WLHQLTKGTHDLAGGSV-------PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
W+ Q T LA GS HL G+++R +L I PVFVFDG P+ KK+
Sbjct: 31 WIFQFLT-TIRLADGSYLTDSKGRVTTHLNGIFYRCISMLENGINPVFVFDGKAPRFKKE 89
Query: 209 TISTLEKDRDQLLL---------ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGE 259
T+ E +++ + ER R S I + + ++ELL GV ++ AP E
Sbjct: 90 TLKERESIKEEARIKAENAVTQEERAMYMRRLSRIDDYIVASSKELLDYMGVKYVQAPAE 149
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKN 294
EAQ A + + D D LFGA+ V +N
Sbjct: 150 GEAQAAWMSGKGLVYAAASQDYDTILFGAKRVIRN 184
>gi|406865692|gb|EKD18733.1| DNA-repair protein rad2 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 460
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P+LK ++ + + LE K+T
Sbjct: 127 TSHLMGMFYRTLRIVDNGIKPIYVFDGAPPKLKSGELAKRFQRKATATEGLEEAKETGTA 186
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E Q LL+ G+P+I+AP EAEAQCA L + ++D
Sbjct: 187 EDVEKFSRRTVRVTREHNAECQRLLKCMGIPYIIAPTEAEAQCAVLARADKVYAAASEDM 246
Query: 282 DIWLFGA 288
D F A
Sbjct: 247 DTLCFDA 253
>gi|294658624|ref|XP_460967.2| DEHA2F13882p [Debaryomyces hansenii CBS767]
gi|317374925|sp|Q6BLF4.2|FEN1_DEBHA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|202953266|emb|CAG89325.2| DEHA2F13882p [Debaryomyces hansenii CBS767]
Length = 379
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 18/153 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q G + N +HL G+++R +L+ IKPV+VFDG P L
Sbjct: 34 DASMCLYQFLIAVRQAEGQQLTNDEGETTSHLSGMFYRTIRLVENSIKPVYVFDGKPPVL 93
Query: 206 K-----------KQTISTLEKDRDQLLLE-RGKQTRLASTITEQMSREAQELLQLFGVPF 253
K ++ I E +D+ +E + + +T + + EA++LL+L GVP+
Sbjct: 94 KGGELEKRLLRREEAIKQRENIKDEGTIEDMVRYEKRTVRVTREQNDEAKKLLELMGVPY 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
+ AP EAEAQCA L G ++D D +
Sbjct: 154 VNAPCEAEAQCAELARGGKVFAAASEDMDTICY 186
>gi|195167797|ref|XP_002024719.1| GL22468 [Drosophila persimilis]
gi|194108124|gb|EDW30167.1| GL22468 [Drosophila persimilis]
Length = 754
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 18/136 (13%)
Query: 173 PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAS 232
P HL L+ R C L++ ++ PVFV +G P+LK Q I+ R++L RG + + A+
Sbjct: 48 PRHHLKNLFFRTCYLIWEQVTPVFVLEGVAPKLKGQVITK----RNELQF-RGVRPKDAA 102
Query: 233 TITEQMSR-------------EAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITD 279
T T+ ++ + + LL G+ + PGEAEA A L GVI+
Sbjct: 103 TGTQTAAKVDKGRTRFNHVLKQCETLLLSMGIQCVQGPGEAEAYAAFLNKHGLVDGVISQ 162
Query: 280 DSDIWLFGARTVYKNF 295
DSD + +GA VY+NF
Sbjct: 163 DSDCFAYGAIRVYRNF 178
>gi|396499081|ref|XP_003845386.1| similar to flap endonuclease 1 [Leptosphaeria maculans JN3]
gi|312221967|emb|CBY01907.1| similar to flap endonuclease 1 [Leptosphaeria maculans JN3]
Length = 423
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 144 KLLVDLISDVSIWLHQLTKGTHDLAGGSV-PNAHLIGLYHRICKLLFFKIKPVFVFDGGV 202
K+ +D + +L + G L S +HL+GL++R +++ IKP++VFDG
Sbjct: 58 KVAIDASMSIYSFLIAVRSGGEQLMNESGETTSHLMGLFYRTLRMVDNGIKPLYVFDGAP 117
Query: 203 PQLKKQTIS------TLEKDRDQLLLERG------KQTRLASTITEQMSREAQELLQLFG 250
P+LK ++ T + + E G K +R +T + + E + LL+L G
Sbjct: 118 PKLKSGELAKRFQRKTEAQAAAEEAKETGTAEDVEKFSRRTVRVTREHNEECRRLLKLMG 177
Query: 251 VPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
+PFIVAP EAEAQCA L G ++D D F +
Sbjct: 178 IPFIVAPTEAEAQCAVLARGGKVYAAASEDMDTLTFNS 215
>gi|125980514|ref|XP_001354281.1| GA10481 [Drosophila pseudoobscura pseudoobscura]
gi|121993075|sp|Q29FC1.1|GEN_DROPS RecName: Full=Flap endonuclease GEN; AltName: Full=Flap
structure-specific endonuclease GEN; AltName:
Full=Xpg-like endonuclease
gi|54642587|gb|EAL31334.1| GA10481 [Drosophila pseudoobscura pseudoobscura]
Length = 754
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 18/136 (13%)
Query: 173 PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAS 232
P HL L+ R C L++ ++ PVFV +G P+LK Q I+ R++L RG + + A+
Sbjct: 48 PRHHLKNLFFRTCYLIWEQVTPVFVLEGVAPKLKGQVIAK----RNELQF-RGVRPKDAA 102
Query: 233 TITEQMSR-------------EAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITD 279
T T+ ++ + + LL G+ + PGEAEA A L GVI+
Sbjct: 103 TGTQTAAKVDKGRTRFNHVLKQCETLLLSMGIQCVQGPGEAEAYAAFLNKHGLVDGVISQ 162
Query: 280 DSDIWLFGARTVYKNF 295
DSD + +GA VY+NF
Sbjct: 163 DSDCFAYGAIRVYRNF 178
>gi|452000823|gb|EMD93283.1| hypothetical protein COCHEDRAFT_1223047 [Cochliobolus
heterostrophus C5]
Length = 926
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 32/165 (19%)
Query: 152 DVSIWLHQL--TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT 209
D SIWL Q+ +KG GG+ N L Y+R+ +L+ I PVFVFDG
Sbjct: 38 DTSIWLFQIQASKGKF-FQGGT--NPALRTFYYRLLRLISLAIHPVFVFDGP-------- 86
Query: 210 ISTLEKDRDQLLLERGKQT--RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASL 267
++ +R K+T +AS I E + A++LL+ FG P +APGEAEA+CA L
Sbjct: 87 --------NKPPFKRNKRTGPNIAS-IPEFL---AKQLLKQFGYPIHLAPGEAEAECALL 134
Query: 268 ELGNHTQGVITDDSDIWLFGARTVYKNFFDKKS-----HVLRYTA 307
+ V+++D D +FG+ +N+ +KS HV Y A
Sbjct: 135 QREGIVDAVLSEDVDTLMFGSGVTLRNWSPEKSGKTPTHVNIYDA 179
>gi|226478114|emb|CAX72750.1| Flap endonuclease 1 [Schistosoma japonicum]
Length = 389
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQ------- 227
+HL+G+++R +++ IKPV+VF+G P +K ++ R + E K
Sbjct: 62 SHLMGMFYRTIRMIESGIKPVYVFEGKPPSMKAGELAKRADRRIESTKELAKAEAEEDLE 121
Query: 228 -----TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
++ +T + + ++LL+L GVPF+ APGEAEAQCA+L V T+D D
Sbjct: 122 AIEKFSKRLVKVTPAHNEDCKQLLRLMGVPFVNAPGEAEAQCAALAKSGKVYAVGTEDMD 181
Query: 283 IWLFG 287
FG
Sbjct: 182 ALAFG 186
>gi|393232393|gb|EJD39975.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 400
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 16/136 (11%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------------ 221
+HL+G ++R +++ IKP +VFDG P+LK +S + R++
Sbjct: 62 TSHLMGFFYRTIRIVENGIKPAYVFDGKPPELKSGVLSKRFERREEAKEEGEEAKEVGTA 121
Query: 222 --LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITD 279
+ER TR +T + + E + LL+L G+P ++AP EAEAQCA L G ++
Sbjct: 122 EDVER--FTRRTVKVTREHNEECRRLLRLMGIPVVIAPSEAEAQCAELARGGKVYAAGSE 179
Query: 280 DSDIWLFGARTVYKNF 295
D D FGA +Y++
Sbjct: 180 DMDTLTFGAPILYRHL 195
>gi|17510005|ref|NP_491168.1| Protein CRN-1 [Caenorhabditis elegans]
gi|75023012|sp|Q9N3T2.1|FEN1_CAEEL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Cell
death-related nuclease 1; AltName: Full=Flap
structure-specific endonuclease 1
gi|31747251|gb|AAP57297.1| cell death-related nuclease 1 [Caenorhabditis elegans]
gi|373220153|emb|CCD72553.1| Protein CRN-1 [Caenorhabditis elegans]
Length = 382
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------------L 221
+HL+G+ +R ++ +KPV+VFDG P +K + + R + +
Sbjct: 61 TSHLMGMLNRTVRMFENGVKPVYVFDGKPPDMKGGELEKRSERRAEAEKALTEAKEKGDV 120
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K R +T+Q + EA+ LL L G+P + AP EAEAQCA L G +T+D
Sbjct: 121 KEAEKFERRLVKVTKQQNDEAKRLLGLMGIPVVEAPCEAEAQCAHLVKAGKVFGTVTEDM 180
Query: 282 DIWLFGARTVYKNFF 296
D FG+ + ++F
Sbjct: 181 DALTFGSTVLLRHFL 195
>gi|268564494|ref|XP_002639126.1| C. briggsae CBR-CRN-1 protein [Caenorhabditis briggsae]
gi|317374879|sp|A8XL25.1|FEN1_CAEBR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Cell
death-related nuclease 1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 382
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q G+ + +HL+G+++R +++ IKPV+VFDG P +K
Sbjct: 34 DASMCLYQFLIAIRQDGSQMQSEDGETTSHLMGMFYRTIRMIDNGIKPVYVFDGKPPDMK 93
Query: 207 KQTISTLEKDRDQL------LLERG------KQTRLASTITEQMSREAQELLQLFGVPFI 254
+ + R + E+G K R +T+Q + E ++LL L G+P +
Sbjct: 94 SGELEKRTERRAEAEKALTEAKEKGDAKEAEKFERRLVKVTKQQNEEVKQLLGLMGIPVV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFF 296
AP EAEAQCA+L G T+D D FG+ + ++
Sbjct: 154 EAPCEAEAQCANLVKAGKVYGTATEDMDALTFGSCVLLRHLL 195
>gi|384245741|gb|EIE19234.1| PIN domain-like protein [Coccomyxa subellipsoidea C-169]
Length = 384
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIST-LEKDRDQL-LLERGKQT--- 228
+HL G++ R K+L +KPV+VFDG P LKK+ +S +E+ D LL K+T
Sbjct: 62 TSHLQGMFFRTAKMLEVGMKPVYVFDGKPPALKKEELSRRVERRGDATDLLTEAKETGAD 121
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
+ +T Q + E + LL+L GVP + AP EAEAQCA + G+ ++D
Sbjct: 122 ADIEKYSKRTVRVTPQHNEECRRLLRLMGVPVVEAPSEAEAQCAQMCKEGLVYGIASEDM 181
Query: 282 DIWLFGARTVYKNFF 296
D F + +N
Sbjct: 182 DSLTFATPKLIRNLM 196
>gi|297668153|ref|XP_002812316.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease GEN homolog 1
[Pongo abelii]
Length = 912
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 138 CNIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFV 197
CN+ + VDL S+W+ + T GSV HL L+ RI L +K VFV
Sbjct: 20 CNLAGKTIAVDL----SLWVCEAQ--TVKKMMGSVMKPHLRNLFFRISYLTQMDVKLVFV 73
Query: 198 FDGGVPQLKKQTISTLEKDRDQLLLERGKQ--TRLASTITEQMSREAQELLQLFGVPFIV 255
+G P+LK IS + R GK + + + + RE +L G+P++
Sbjct: 74 MEGEPPKLKADVISKRNQTR---YGSSGKSWSQKTGRSHFKSVLRECLHMLXCLGIPWVQ 130
Query: 256 APGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVL 303
A GE EA CA L +G+H G +T+D D +L Y F D VL
Sbjct: 131 AAGEPEALCAYLIVGDHVDGCLTNDGDTFLXXXXXXYVLFEDXTKSVL 178
>gi|323457006|gb|EGB12872.1| hypothetical protein AURANDRAFT_19112 [Aureococcus anophagefferens]
Length = 396
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 24/173 (13%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNA-----------HLIGLYHRICKLLFFKIKPVFVFDG 200
D S+ L+Q G P++ H+ G+++R +LL ++PV+VFDG
Sbjct: 34 DASMSLYQFLIAIRHQGEGGAPSSVLTNAEGEQTSHIQGMFNRTIRLLQAGVRPVYVFDG 93
Query: 201 GVPQLKKQTIS--TLEKDRDQLLLERGKQTRLASTITE------QMSR----EAQELLQL 248
P +K ++ T ++ + L++ + A I++ ++SR + ++LL+L
Sbjct: 94 KPPNMKGGELAKRTAKRQEAEAALKKATENDDAEGISKYSALLTKVSRKDCDDVKQLLRL 153
Query: 249 FGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF-FDKKS 300
GVP + AP EAEAQCA L G V T+D D FG+ +N F KKS
Sbjct: 154 MGVPVVDAPCEAEAQCAELVRGGKAHAVGTEDMDALTFGSTRQLRNMTFTKKS 206
>gi|317374875|sp|C3KJE6.1|FEN1_ANOFI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|229367576|gb|ACQ58768.1| Flap endonuclease 1-A [Anoplopoma fimbria]
Length = 380
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLL---ERGKQ 227
+HL+G+++R ++L IKPV+VFDG PQLK + + R +++L E G+Q
Sbjct: 61 TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSAELEKRGEKRAEAEKMLAQAQELGEQ 120
Query: 228 ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
++ +T+Q + E ++LL L GVP+I AP EAEA CA+L T+D
Sbjct: 121 ENIDKFSKRLVKVTKQHNDECKKLLTLMGVPYIEAPCEAEATCAALVKAGKVFATATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG + ++
Sbjct: 181 DGLTFGTNVLLRHL 194
>gi|296218462|ref|XP_002755459.1| PREDICTED: flap endonuclease 1 [Callithrix jacchus]
Length = 380
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKRLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNFFDKKSHVL 303
D FG+ + ++ +S L
Sbjct: 181 DCLTFGSPVLMRHLTASESKKL 202
>gi|430813459|emb|CCJ29208.1| unnamed protein product [Pneumocystis jirovecii]
Length = 278
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 18/153 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ ++Q G + N +HL+G+++R ++ I+P +VFDG P+L
Sbjct: 34 DASMSIYQFLVAVRQRDGQQLMNKTGETTSHLMGIFYRTLRMCDNGIRPCYVFDGTPPKL 93
Query: 206 K------------KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPF 253
K K S LE + + K +R +T + + E ++LL+L G+P+
Sbjct: 94 KSGELAKRSERREKAAKSYLEAKEADSIEDMNKFSRRTVRMTREHNEECKKLLKLMGIPY 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
+ AP EAEAQCA+L ++D DI F
Sbjct: 154 VDAPCEAEAQCAALAKAGKVYAAASEDMDILCF 186
>gi|328852744|gb|EGG01887.1| hypothetical protein MELLADRAFT_110505 [Melampsora larici-populina
98AG31]
Length = 385
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLL----------- 222
+HL+G ++R ++ IKP +VFDG PQLK ++ + R +
Sbjct: 62 TSHLMGFFYRTIRMAENGIKPAYVFDGKPPQLKSGVLAKRFEKRTEAAEEGEEAKEVGTT 121
Query: 223 -ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
+ K TR +T + + E + LL L G+P+++AP EAEAQCA L G G ++D
Sbjct: 122 EDLDKLTRRTVKVTREHNEECRRLLTLMGIPWVIAPSEAEAQCAELCKGGLVYGAGSEDM 181
Query: 282 DIWLFG 287
D FG
Sbjct: 182 DTLTFG 187
>gi|401888761|gb|EJT52712.1| hypothetical protein A1Q1_02762 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1245
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIWL+Q D G + NAH++G RI KLLF IKPVFVFDGG P LK+
Sbjct: 27 LAIDSSIWLYQFQSTMRDKEGRVLVNAHVLGFLRRINKLLFHGIKPVFVFDGGAPALKRS 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFG 250
TI+ E+ R ++ + QM REA + Q G
Sbjct: 87 TIA--ERKRRKVGAAFNHAKMAEKLLAAQMRREAVRVAQEGG 126
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 204 QLKKQTISTLEKDRDQLLLERGKQTRLA----STITEQMSREAQELLQLFGVPFIVAPGE 259
Q+K + ++ + + D+ + QT+ A IT+ M + Q LL+ FG+P+I AP E
Sbjct: 842 QIKGRDLTDVRTEIDEEIRVLNTQTKAAMRDSDEITQAMVVQIQTLLRHFGIPYITAPME 901
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFD 297
AEAQCA L G+ITDDSD++LFG +KN F+
Sbjct: 902 AEAQCAKLAELGLVDGIITDDSDVFLFGGTQCFKNIFN 939
>gi|320038686|gb|EFW20621.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 845
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 24/145 (16%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDG-GVPQLKKQTI 210
DVSIWL Q L N L L++R+ +L+ + P+FVFDG G P+ K
Sbjct: 94 DVSIWLFQAQAAQGGL------NPELRALFYRLARLISLPVHPIFVFDGSGRPEYK---- 143
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
R +L++ G+ A I R ++ L++LFG APGEAEA+CA L+
Sbjct: 144 ------RGKLVIRNGRSG--AWNI-----RSSKRLIELFGFHHHDAPGEAEAECAKLQTM 190
Query: 271 NHTQGVITDDSDIWLFGARTVYKNF 295
+++D D +FG++ + NF
Sbjct: 191 GIVDAAMSNDIDTVMFGSKITFMNF 215
>gi|46138549|ref|XP_390965.1| hypothetical protein FG10789.1 [Gibberella zeae PH-1]
gi|408391605|gb|EKJ70977.1| hypothetical protein FPSE_08836 [Fusarium pseudograminearum CS3096]
Length = 395
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQTRLA 231
+HL+G+++R +++ IKP++VFDG P+LK ++ + + + LE K+T A
Sbjct: 61 TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGTA 120
Query: 232 STI------TEQMSRE----AQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
I T +++RE Q LL+L G+P+I+AP EAEAQCA L ++D
Sbjct: 121 EDIEKFSRRTVRVTREHNADCQRLLKLMGIPYIIAPTEAEAQCAVLAQAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|403347702|gb|EJY73284.1| FEN-1 nuclease [Oxytricha trifallax]
Length = 392
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 22/173 (12%)
Query: 138 CNIVINKLLVDLISDVSIWLHQ-LTKGTHDLAGGSVP---------NAHLIGLYHRICKL 187
C+ I + ++ +I ++ ++Q L T+++ G V AHLIGL++R +
Sbjct: 11 CDASIVRFILIVIVSINQAIYQFLISTTYNVKGVGVKQFTDQQGNQTAHLIGLFNRNIQF 70
Query: 188 LFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLER------GKQTRLAS------TIT 235
IK ++VFDG P+LK +T+ +++RD+ E+ G + ++A +T
Sbjct: 71 AQHGIKAIWVFDGKPPELKSRTLEKRKENRDKAEDEKEEAQEDGDEFKMAKMAQRTVKVT 130
Query: 236 EQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
+ M +A+ L++ G P + APGEAEA CA L +++D D FG+
Sbjct: 131 KSMVEDAKRLVKAMGFPVVHAPGEAEAFCAYLVKEGKAFATVSEDMDSLTFGS 183
>gi|403255047|ref|XP_003920260.1| PREDICTED: flap endonuclease 1 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403255049|ref|XP_003920261.1| PREDICTED: flap endonuclease 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 380
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNFFDKKSHVL 303
D FG+ + ++ +S L
Sbjct: 181 DCLTFGSPVLMRHLTASESKKL 202
>gi|357498397|ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago truncatula]
gi|355494502|gb|AES75705.1| Flap endonuclease GEN-like protein [Medicago truncatula]
Length = 571
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 78/169 (46%), Gaps = 14/169 (8%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S W+ QL A HL GL+HR+ L+ VFV DG +P +K +S
Sbjct: 30 DLSCWMVQLQNVCKSHACLK-EKVHLRGLFHRLRALIALNCTVVFVSDGSIPAIK---LS 85
Query: 212 TLEKDRDQLLLERGKQTRLASTIT---------EQMSREAQELLQLFGVPFIVAPGEAEA 262
T + + K+T L T + M EA+ L GV + EAEA
Sbjct: 86 TYRRRLNNGKEVAQKETNLQKTTSLRRNLGSEFSCMISEAKILGMALGVSCLNGIEEAEA 145
Query: 263 QCASLELGNHTQGVITDDSDIWLFGARTVYKNF-FDKKSHVLRYTAPDI 310
QCA L + G + DSDI+LFGARTVY++ +V+ Y DI
Sbjct: 146 QCALLNSESLCDGCFSSDSDIFLFGARTVYRDICLGDGGYVVCYEMADI 194
>gi|351699147|gb|EHB02066.1| Flap endonuclease 1 [Heterocephalus glaber]
Length = 380
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + +
Sbjct: 61 TSHLMGMFYRTIRMMEHGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|330835718|ref|YP_004410446.1| flap endonuclease-1 [Metallosphaera cuprina Ar-4]
gi|329567857|gb|AEB95962.1| flap endonuclease-1 [Metallosphaera cuprina Ar-4]
Length = 301
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQ----- 227
+HL GL++R LL + P++VFDG P++K Q + K +++ + LER K+
Sbjct: 9 SHLNGLFYRTVNLLEQGVIPIYVFDGKPPEIKAQELENRRKLKEEAMKKLERAKEEGKIE 68
Query: 228 -----TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
+++ S +T M+ E + LL L G+P + AP E EA+ A + + D D
Sbjct: 69 EVRKYSQMTSRLTSSMANEGKRLLSLMGIPTVQAPSEGEAEAAYMNSQGLVYAAASQDYD 128
Query: 283 IWLFGARTVYKNF 295
LFGA + +N
Sbjct: 129 SLLFGATRLIRNL 141
>gi|401413646|ref|XP_003886270.1| putative flap endonuclease-1 [Neospora caninum Liverpool]
gi|325120690|emb|CBZ56245.1| putative flap endonuclease-1 [Neospora caninum Liverpool]
Length = 545
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 23/165 (13%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN---------AHLIGLYHRICKLLFFKIKPVFVFDGGV 202
D S+ L+Q D G S N +H+ G+ +R +LL I+PV+VFDG
Sbjct: 34 DASMSLYQFMVAIRD--GNSFGNFTNDAGDCTSHIAGMLNRAIRLLEQGIRPVYVFDGKP 91
Query: 203 PQLKKQTISTLEKDRD--QLLLERGKQTRLASTITEQMSREA----------QELLQLFG 250
P+LK ++ + R+ Q+ E+ ++ A + +Q+ R + LL+L G
Sbjct: 92 PELKSGELAKRREVRESAQVAAEKAREEGNAEELRKQIVRSVRVSQQHNDDIKRLLRLMG 151
Query: 251 VPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
+P + AP EAEAQCA L T+D+D FGA + +N
Sbjct: 152 LPVVEAPCEAEAQCAELTKHKKVWATATEDADALTFGATRLIRNL 196
>gi|317374948|sp|Q0UZR3.3|FEN1_PHANO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 396
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+GL++R +++ IKP++VFDG P+LK ++ + + +
Sbjct: 61 TSHLMGLFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKSEAHAAAEEAKETGTA 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K +R +T + + E + LL+L G+PFI+AP EAEAQCA+L G ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNEECRRLLKLMGIPFIIAPTEAEAQCATLARGGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLTF 185
>gi|409048860|gb|EKM58338.1| hypothetical protein PHACADRAFT_193460 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1225
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 40/60 (66%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q D G + NAH++G RI KLLF+ IKPVFVFDGG P LK+ TIS
Sbjct: 30 DSSIWIYQFQATMRDKEGRGLVNAHVLGFLRRISKLLFYGIKPVFVFDGGAPALKRTTIS 89
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 63/109 (57%), Gaps = 8/109 (7%)
Query: 202 VPQLKKQTISTLEKDRDQLLLERGKQTRLA----STITEQMSRE----AQELLQLFGVPF 253
V Q++ + + + K+ D + +Q ++A IT QM + A+ +L+LFG+P+
Sbjct: 797 VSQMRGRNLDEVRKEIDDEIRALKEQRKIAMRDSEDITHQMISQVMHGAEMMLRLFGIPY 856
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHV 302
I AP EAEAQCA L G+ITDDSD++LFG V KN F++ V
Sbjct: 857 ITAPMEAEAQCAELLALGLVDGIITDDSDVFLFGGARVLKNMFNQSKTV 905
>gi|315230863|ref|YP_004071299.1| flap structure-specific endonuclease [Thermococcus barophilus MP]
gi|315183891|gb|ADT84076.1| flap structure-specific endonuclease [Thermococcus barophilus MP]
Length = 342
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 139 NIVINKLLVDLISDVSIWLHQLTK--GTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVF 196
N+ K+ +D ++ + +L + + GT + +HL GL++R L+ IKP +
Sbjct: 18 NLNGRKIAIDALNAIYQFLSIIRQRDGTPLMDSKGRITSHLSGLFYRTINLMEAGIKPAY 77
Query: 197 VFDGGVPQLKKQTISTLEKDRD------QLLLERG------KQTRLASTITEQMSREAQE 244
VFDG P+ KK+ + + R+ Q L RG K + AS + EQ+ +A++
Sbjct: 78 VFDGKPPEFKKKELEKRAEAREEAEEKWQEALARGDLEEAKKYAQRASRVNEQLIEDAKK 137
Query: 245 LLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
LL+L G+P++ AP E EAQ A + + D D LFGA + +N
Sbjct: 138 LLELMGIPWVQAPSEGEAQAAYMASKGKVWASASQDYDSLLFGAPRLVRNL 188
>gi|384485605|gb|EIE77785.1| hypothetical protein RO3G_02489 [Rhizopus delemar RA 99-880]
Length = 496
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ ++Q G + N +HL+G+++R +++ IKPV+VFDG P L
Sbjct: 200 DASMSIYQFMIAVRQQDGQVLQNEEGETTSHLMGMFYRTVRMVDNGIKPVYVFDGKPPTL 259
Query: 206 KKQTISTLE--KDRDQLLLERGKQTRLASTITEQMSR----------EAQELLQLFGVPF 253
K ++ + K+ Q +E + A+ +T R E + LL+ G+P+
Sbjct: 260 KSGELAKRKARKEEAQEKMEEANEIGTAADVTRYTKRTVKVTSEHNNECKRLLKAMGIPY 319
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
+ AP EAEAQCA L G ++D D F A
Sbjct: 320 VEAPCEAEAQCAELARGGKVYAAASEDMDTLTFKA 354
>gi|348688657|gb|EGZ28471.1| hypothetical protein PHYSODRAFT_294028 [Phytophthora sojae]
Length = 390
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 72/166 (43%), Gaps = 22/166 (13%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNA----------HLIGLYHRICKLLFFKIKPVFVFDGG 201
D S+ L+Q GG A HL G++ R +++ +KPV+VFDG
Sbjct: 35 DASMALYQFLIAIRSADGGGPSQALTNADGEVTSHLQGMFSRTIRMMENGLKPVYVFDGK 94
Query: 202 VPQLKKQTISTLEKDRD--QLLLERGKQTRLASTI----------TEQMSREAQELLQLF 249
P +K ++ R Q LE + A I T Q + + +ELL+L
Sbjct: 95 PPVMKSGELAKRSDRRQEAQKALEEATEKGNAEDIDRFNKRLVRATPQHNEDCKELLRLM 154
Query: 250 GVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
GVP I AP EAEA CA L G T+D D FG +Y+
Sbjct: 155 GVPHITAPCEAEASCAELAKGGRVYAAGTEDMDALTFGVPVLYRRL 200
>gi|402580560|gb|EJW74510.1| hypothetical protein WUBG_14580, partial [Wuchereria bancrofti]
Length = 266
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 17/154 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q G+ +HL+G+++R +++ IKPV+VFDG PQ+K
Sbjct: 34 DASMCLYQFLIAVRQDGSQLQTESGETTSHLLGMFYRTIRMIDNGIKPVYVFDGKPPQMK 93
Query: 207 KQTISTLEKDRDQLLLERGKQTRLAS------------TITEQMSREAQELLQLFGVPFI 254
+ + R + +R L +T++ + EA+ L+ L G+P +
Sbjct: 94 ASELEKRTERRTEAEKQRNDAVELGDEASVNKFERRLVKVTKEQNEEAKRLVTLMGIPIL 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
AP EAEAQCA+L +++D D FG+
Sbjct: 154 DAPCEAEAQCAALAKAGKVFATVSEDMDALTFGS 187
>gi|261244970|ref|NP_001159668.1| flap endonuclease 1 [Ovis aries]
gi|317376193|sp|C8BKD0.1|FEN1_SHEEP RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|256665367|gb|ACV04829.1| flap structure-specific endonuclease 1 [Ovis aries]
Length = 380
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ------------LL 221
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 TEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|301781710|ref|XP_002926265.1| PREDICTED: flap endonuclease 1-like [Ailuropoda melanoleuca]
gi|281345366|gb|EFB20950.1| hypothetical protein PANDA_015901 [Ailuropoda melanoleuca]
Length = 380
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ------------LL 221
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRGERRAEAEKQLQQAQAAGVE 120
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K T+ +T+Q + E + LL L GVP++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGVPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|169599851|ref|XP_001793348.1| hypothetical protein SNOG_02751 [Phaeosphaeria nodorum SN15]
gi|160705335|gb|EAT89482.2| hypothetical protein SNOG_02751 [Phaeosphaeria nodorum SN15]
Length = 377
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+GL++R +++ IKP++VFDG P+LK ++ + + +
Sbjct: 42 TSHLMGLFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKSEAHAAAEEAKETGTA 101
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K +R +T + + E + LL+L G+PFI+AP EAEAQCA+L G ++D
Sbjct: 102 EDVEKFSRRTVRVTREHNEECRRLLKLMGIPFIIAPTEAEAQCATLARGGKVYAAASEDM 161
Query: 282 DIWLF 286
D F
Sbjct: 162 DTLTF 166
>gi|328874795|gb|EGG23160.1| XPG [Dictyostelium fasciculatum]
Length = 308
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNA------HLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S L+Q G S+ N+ HL G ++R K + IKPVFVFDG P L
Sbjct: 49 DTSNNLYQFLTAIGTENGSSLMNSIGETTSHLQGTFYRTIKFMSNGIKPVFVFDGAPPTL 108
Query: 206 KKQTIS--TLEKDRDQLLLERGKQT----------RLASTITEQMSREAQELLQLFGVPF 253
K ++ + +K + L+ K+T + ++ T + + E +LL L G+P
Sbjct: 109 KSGELAKRSAKKKEAKENLDEAKETGTTEDVAKFSKRTTSATRKQNEECIKLLTLMGIPV 168
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
+ AP EAEAQCA L G ++D D FG + + +N
Sbjct: 169 VRAPCEAEAQCAELVKGGKAWASGSEDMDSLAFGTKILLRNL 210
>gi|14520948|ref|NP_126423.1| flap endonuclease-1 [Pyrococcus abyssi GE5]
gi|28380024|sp|Q9V0P9.1|FEN_PYRAB RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|5458165|emb|CAB49654.1| fen1 FLAP endonuclease-1 [Pyrococcus abyssi GE5]
gi|380741502|tpe|CCE70136.1| TPA: flap endonuclease-1 [Pyrococcus abyssi GE5]
Length = 343
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 139 NIVINKLLVDLISDVSIWLHQLTK--GTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVF 196
N+ K+ +D ++ + +L + + GT + +HL GL++R L+ IKPV+
Sbjct: 18 NLYGKKIAIDALNAIYQFLSTIRQRDGTPLMDSKGRITSHLSGLFYRTINLMEAGIKPVY 77
Query: 197 VFDGGVPQLKKQTISTLEKDRDQL------LLERG------KQTRLASTITEQMSREAQE 244
VFDG P KK+ + + R++ L +G K + A+ + E + +A++
Sbjct: 78 VFDGKPPAFKKKELEKRREAREEAEIKWKEALAKGDIEEARKYAQRATKVNEMLIEDAKK 137
Query: 245 LLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
LLQL G+P + AP E EAQ A + + D D LFG + +N
Sbjct: 138 LLQLMGIPIVQAPSEGEAQAAYMAGKGDVYASASQDYDSLLFGTPRLVRNL 188
>gi|403162368|ref|XP_003322600.2| flap endonuclease 1-A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375172578|gb|EFP78181.2| flap endonuclease 1-A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 387
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+GL++R +++ IKP +VFDG P +K +S + R + E
Sbjct: 62 TSHLMGLFYRTIRMVDNGIKPAYVFDGKPPAMKAGVLSKRFERRQEAKEEGEEAKETGTT 121
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K +R +T + + E + LL L G+P++VAP EAEAQCA L G G ++D
Sbjct: 122 EDIDKLSRRTVKVTREHNEECRRLLTLMGIPWVVAPSEAEAQCAELCRGGLVYGAGSEDM 181
Query: 282 DIWLFG 287
D FG
Sbjct: 182 DTLTFG 187
>gi|390961742|ref|YP_006425576.1| flap endonuclease-1 [Thermococcus sp. CL1]
gi|390520050|gb|AFL95782.1| flap endonuclease-1 [Thermococcus sp. CL1]
Length = 341
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------LLERG-- 225
+HL G ++R L+ IKP +VFDG P+ K++ I + R++ LERG
Sbjct: 55 TSHLSGFFYRTINLMEAGIKPAYVFDGKPPEFKRKEIEKRREAREKAEERWHEALERGDL 114
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K A+ + E + +A++LL+L G+P I AP E EAQ A + + D
Sbjct: 115 EEAKKYAMRATRVNEGLINDAKKLLELMGIPVIQAPSEGEAQAAYMAAKKKVYASASQDY 174
Query: 282 DIWLFGARTVYKNF 295
D LFGA + +N
Sbjct: 175 DSLLFGAPRLVRNL 188
>gi|449446177|ref|XP_004140848.1| PREDICTED: flap endonuclease GEN-like 2-like [Cucumis sativus]
Length = 563
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 18/174 (10%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+S W+ +L+ + S +L GL++R+ L+ +FV DG +P +K
Sbjct: 27 LCIDLSCWIVELSSVSKSHCH-SNSKFYLKGLFYRLRTLIALNCSLIFVTDGSIPGIKLS 85
Query: 209 T----------ISTLEKDRDQLL-LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAP 257
T ++ + + Q+ L+R K + + M +EAQ L G+P + A
Sbjct: 86 TYRRRLNNGNEVAQTDANPQQICSLKRNKGSEFS-----LMIKEAQALGLALGIPCLDAV 140
Query: 258 GEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF-FDKKSHVLRYTAPDI 310
EAEAQCA L G T DSD +LFGARTVY++ HV+ Y DI
Sbjct: 141 EEAEAQCALLNSELLCDGCFTSDSDAFLFGARTVYRDICLGDSGHVVCYEMDDI 194
>gi|355688549|gb|AER98539.1| flap structure-specific endonuclease 1 [Mustela putorius furo]
Length = 379
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L GVP++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGVPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|392595001|gb|EIW84325.1| hypothetical protein CONPUDRAFT_100293 [Coniophora puteana
RWD-64-598 SS2]
Length = 1485
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW++Q D G + NAH++G RICKLLF+ ++PVFVFDGG P +K+ TI
Sbjct: 30 DSSIWIYQFQATMRDRDGRGLVNAHVLGFLRRICKLLFYGVRPVFVFDGGAPAMKRGTI- 88
Query: 212 TLEKDR 217
+E+ R
Sbjct: 89 -MERKR 93
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 205 LKKQTISTLEKDRDQLLLERGKQTRLA----STITEQMSREAQELLQLFGVPFIVAPGEA 260
++ + I T+ ++ D + +Q + A IT QM + +L+LFG+P+I AP EA
Sbjct: 916 MRGRDIDTVRREIDDEIRVLNQQKKAAMRDSDDITTQMISQIMLMLRLFGIPYITAPMEA 975
Query: 261 EAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHV 302
EAQCA L +GVITDDSD++LFG V+KN F++ V
Sbjct: 976 EAQCAELVQLGLVEGVITDDSDVFLFGGLRVFKNMFNQSKTV 1017
>gi|449510827|ref|XP_004163772.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like [Cucumis
sativus]
Length = 382
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 82/169 (48%), Gaps = 20/169 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLA--GGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S+ ++Q GT L G V +HL G+++R +LL IKPV+VFDG P
Sbjct: 34 DASMSIYQFLIVVGRSGTEMLTNEAGEV-TSHLQGMFNRTIRLLEAGIKPVYVFDGKPPD 92
Query: 205 LKKQTISTLEKDRDQLL------LERG------KQTRLASTITEQMSREAQELLQLFGVP 252
LK Q ++ R +E G K ++ +T+Q + + + LL+L GVP
Sbjct: 93 LKXQELAKRYSKRADATEDLADAIEVGNKDDIEKFSKRTVKVTKQHNDDCKRLLRLMGVP 152
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSH 301
I AP EAEAQCA+L V ++D D FG+ ++ D S
Sbjct: 153 VIEAPSEAEAQCAALCKLGKVYAVASEDMDSLTFGSPRFLRHLMDPSSR 201
>gi|359490377|ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like [Vitis vinifera]
gi|297741051|emb|CBI31782.3| unnamed protein product [Vitis vinifera]
Length = 565
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNA-HLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
D+S W+ QL A S+ + +L GL+HR+ L+ +FV DG +P +K T
Sbjct: 30 DLSCWMVQLQNVNKSHA--SIKDKLYLKGLFHRLRALIALNCSLLFVTDGSIPAIKLATY 87
Query: 211 -----STLEKDRDQL------LLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGE 259
S E RD+ L R + + I +EA+ L G+P + E
Sbjct: 88 RRRLNSGTEVTRDETNSHNVPSLRRNMGSEFSCMI-----KEAKVLGLALGIPCLDGIEE 142
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF-FDKKSHVLRYTAPDI 310
AEAQCA L + G T DSD++LFGARTVY++ + +V+ Y DI
Sbjct: 143 AEAQCALLNSESLCDGCFTSDSDVFLFGARTVYRDICLGEGGYVVCYEMADI 194
>gi|221485037|gb|EEE23327.1| flap endonuclease-1, putative [Toxoplasma gondii GT1]
Length = 552
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN---------AHLIGLYHRICKLLFFKIKPVFVFDGGV 202
D S+ L+Q D G S N +H+ G+ +R +LL ++PV+VFDG
Sbjct: 34 DASMSLYQFMVAIRD--GNSFGNFTNDAGDCTSHIAGMLNRAIRLLEQGVRPVYVFDGKP 91
Query: 203 PQLKKQTIS-----------TLEKDRDQLLLER-GKQTRLASTITEQMSREAQELLQLFG 250
P+LK ++ EK R++ +E KQ + +++Q + + + LL+L G
Sbjct: 92 PELKSGELAKRRELRESAQEAAEKAREEGNVEELRKQIVRSVRVSKQHNEDVKRLLRLMG 151
Query: 251 VPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF-FDKKS 300
+P + AP EAEAQCA L T+D+D FGA + +N F ++S
Sbjct: 152 LPVVEAPCEAEAQCAELTKNRKVWATATEDADALTFGATRLIRNLTFGERS 202
>gi|392870771|gb|EAS32604.2| hypothetical protein CIMG_03493 [Coccidioides immitis RS]
Length = 857
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 24/145 (16%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDG-GVPQLKKQTI 210
DVSIWL Q L N L L++R+ +L+ + P+FVFDG G P+ K
Sbjct: 106 DVSIWLFQAQAAQGGL------NPELRALFYRLARLISLPVHPIFVFDGSGRPEYK---- 155
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
R +L++ G+ A I R ++ L++LFG APGEAEA+CA L+
Sbjct: 156 ------RGKLVIRNGRAG--AWNI-----RSSKRLIELFGFHHHDAPGEAEAECAKLQTM 202
Query: 271 NHTQGVITDDSDIWLFGARTVYKNF 295
+++D D +FG++ + NF
Sbjct: 203 GIVDAAMSNDIDTVMFGSKITFMNF 227
>gi|410974093|ref|XP_003993482.1| PREDICTED: flap endonuclease 1 [Felis catus]
Length = 380
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ------------LL 221
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAG 120
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|399218750|emb|CCF75637.1| unnamed protein product [Babesia microti strain RI]
Length = 452
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 155 IWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLE 214
I + Q T + P +H+ GL R+ LL I+P++VFDG PQ K T+ +
Sbjct: 44 IAIRQGNFATSLVNANGEPTSHIAGLMLRVAALLELGIRPIYVFDGEPPQAKSDTLLKRK 103
Query: 215 KDRDQLL------LERG------KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEA 262
+ +++ L +E G KQT ++ + S++A + L+L G+P + A EAEA
Sbjct: 104 ERKEEALKLLEQAMETGDLEEIKKQTSRTVRVSREQSKQAMKFLELCGLPVVEASQEAEA 163
Query: 263 QCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
QCA + T+D+D FG + +N
Sbjct: 164 QCAYMVKWGIADVASTEDTDCLTFGTPVLIRNL 196
>gi|119186891|ref|XP_001244052.1| hypothetical protein CIMG_03493 [Coccidioides immitis RS]
Length = 813
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 24/145 (16%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDG-GVPQLKKQTI 210
DVSIWL Q L N L L++R+ +L+ + P+FVFDG G P+ K
Sbjct: 87 DVSIWLFQAQAAQGGL------NPELRALFYRLARLISLPVHPIFVFDGSGRPEYK---- 136
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
R +L++ G+ A I R ++ L++LFG APGEAEA+CA L+
Sbjct: 137 ------RGKLVIRNGRAG--AWNI-----RSSKRLIELFGFHHHDAPGEAEAECAKLQTM 183
Query: 271 NHTQGVITDDSDIWLFGARTVYKNF 295
+++D D +FG++ + NF
Sbjct: 184 GIVDAAMSNDIDTVMFGSKITFMNF 208
>gi|317419778|emb|CBN81814.1| Flap endonuclease 1-B [Dicentrarchus labrax]
Length = 380
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLL---ERGKQ 227
+HL+G+++R ++L IKPV+VFDG PQLK + + R ++LL E G+Q
Sbjct: 61 TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSAELEKRGERRAEAEKLLAQAQEMGEQ 120
Query: 228 ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
++ +T+Q + + ++LL L GVP+I AP EAEA CA+L T+D
Sbjct: 121 ENIDKFSKRLVKVTKQHNDDCKKLLTLMGVPYIEAPCEAEATCAALVKAGKVFATATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG + ++
Sbjct: 181 DGLTFGTNVLLRHL 194
>gi|75775305|gb|AAI05256.1| Flap structure-specific endonuclease 1 [Bos taurus]
Length = 380
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ------------LL 221
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQEAQAAGAE 120
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 AEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|332249905|ref|XP_003274094.1| PREDICTED: flap endonuclease 1 isoform 1 [Nomascus leucogenys]
gi|332249907|ref|XP_003274095.1| PREDICTED: flap endonuclease 1 isoform 2 [Nomascus leucogenys]
gi|441604271|ref|XP_004087863.1| PREDICTED: flap endonuclease 1 [Nomascus leucogenys]
Length = 380
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|75057714|sp|Q58DH8.1|FEN1_BOVIN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|61553325|gb|AAX46387.1| flap structure-specific endonuclease 1 [Bos taurus]
gi|61553832|gb|AAX46466.1| flap structure-specific endonuclease 1 [Bos taurus]
gi|61554710|gb|AAX46602.1| flap structure-specific endonuclease 1 [Bos taurus]
gi|296471658|tpg|DAA13773.1| TPA: flap endonuclease 1 [Bos taurus]
Length = 380
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ------------LL 221
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQEAQAAGAE 120
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 AEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|194377686|dbj|BAG63206.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + +
Sbjct: 25 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 84
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 85 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 144
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 145 DCLTFGSPVLMRHL 158
>gi|17555016|ref|NP_498361.1| Protein GEN-1 [Caenorhabditis elegans]
gi|351050616|emb|CCD65214.1| Protein GEN-1 [Caenorhabditis elegans]
Length = 434
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D IWL++ KG + PN++L+ + RI +LL KI P+ VFD + + +
Sbjct: 30 DGHIWLYESLKGC-EAHHQQTPNSYLVTFFTRIQRLLELKIIPIVVFD----NINASSSA 84
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSR--EAQELLQLFGVPFIVAPGEAEAQCASLEL 269
KD+++ + R +++ S T + + LL G+ I+APG+ EAQCA LE
Sbjct: 85 HESKDQNEFV-PRKRRSFGDSPFTNLVDHVYKTNALLTELGIKVIIAPGDGEAQCARLED 143
Query: 270 GNHTQGVITDDSDIWLFGARTVYK 293
T G IT D D +LFG + +Y+
Sbjct: 144 LGVTSGCITTDFDYFLFGGKNLYR 167
>gi|440901464|gb|ELR52399.1| Flap endonuclease 1 [Bos grunniens mutus]
Length = 380
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ------------LL 221
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQEAQAAGAE 120
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 AEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|78042574|ref|NP_001030285.1| flap endonuclease 1 [Bos taurus]
gi|61553249|gb|AAX46374.1| flap structure-specific endonuclease 1 [Bos taurus]
Length = 380
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ------------LL 221
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQEAQAAGAE 120
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 AEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|388454741|ref|NP_001252879.1| flap endonuclease 1 [Macaca mulatta]
gi|402893159|ref|XP_003909769.1| PREDICTED: flap endonuclease 1 isoform 1 [Papio anubis]
gi|402893161|ref|XP_003909770.1| PREDICTED: flap endonuclease 1 isoform 2 [Papio anubis]
gi|75076152|sp|Q4R5U5.1|FEN1_MACFA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|67970375|dbj|BAE01530.1| unnamed protein product [Macaca fascicularis]
gi|355566422|gb|EHH22801.1| Flap endonuclease 1 [Macaca mulatta]
gi|355752043|gb|EHH56163.1| Flap endonuclease 1 [Macaca fascicularis]
gi|380787489|gb|AFE65620.1| flap endonuclease 1 [Macaca mulatta]
gi|383413161|gb|AFH29794.1| flap endonuclease 1 [Macaca mulatta]
gi|384939550|gb|AFI33380.1| flap endonuclease 1 [Macaca mulatta]
Length = 380
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|330689547|pdb|3Q8K|A Chain A, Crystal Structure Of Human Flap Endonuclease Fen1 (Wt) In
Complex With Product 5'-Flap Dna, Sm3+, And K+
gi|330689551|pdb|3Q8L|A Chain A, Crystal Structure Of Human Flap Endonuclease Fen1 (Wt) In
Complex With Substrate 5'-Flap Dna, Sm3+, And K+
Length = 341
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + +
Sbjct: 60 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 119
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 120 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 179
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 180 DCLTFGSPVLMRHL 193
>gi|325186427|emb|CCA20932.1| flap endonuclease 1 putative [Albugo laibachii Nc14]
Length = 389
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 18/137 (13%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------------- 220
+HL G++ R +L+ IKPV+VFDG P +K + LEK +D+
Sbjct: 66 TSHLQGMFSRTIRLMENGIKPVYVFDGKPPVMKSKE---LEKRKDRRTAANKSLEEATEA 122
Query: 221 --LLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
L+E + ++ T Q S++ +ELL+L GVP + AP EAEA CA+L + T
Sbjct: 123 GNLVEIDRFSKRLVHATSQHSQDCKELLRLMGVPVLTAPCEAEATCATLAKHHKVYASGT 182
Query: 279 DDSDIWLFGARTVYKNF 295
+D D+ FG +Y+
Sbjct: 183 EDMDVLTFGTPVLYRRM 199
>gi|61680058|pdb|1UL1|X Chain X, Crystal Structure Of The Human Fen1-Pcna Complex
gi|61680059|pdb|1UL1|Y Chain Y, Crystal Structure Of The Human Fen1-Pcna Complex
gi|61680060|pdb|1UL1|Z Chain Z, Crystal Structure Of The Human Fen1-Pcna Complex
Length = 379
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + +
Sbjct: 60 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 119
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 120 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 179
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 180 DCLTFGSPVLMRHL 193
>gi|71652611|ref|XP_814958.1| flap endonuclease-1 (FEN-1) [Trypanosoma cruzi strain CL Brener]
gi|122023721|sp|Q4DKQ5.1|FEN1_TRYCC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|70879977|gb|EAN93107.1| flap endonuclease-1 (FEN-1), putative [Trypanosoma cruzi]
Length = 393
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 25/167 (14%)
Query: 152 DVSIWLHQLT---KGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGV 202
D S+ ++Q KG D G + N +HL GL+ R +++ ++P++VFDG
Sbjct: 34 DASMTIYQFIIAMKGFQDGQGMELTNEAGEVTSHLNGLFARTLRMVDEGLRPIYVFDGKP 93
Query: 203 PQLK--------------KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQL 248
P LK +Q T +++ + L+E K ++ ++ + EA++LLQL
Sbjct: 94 PTLKASELQERRQRAEEAQQLFDTAKEEGNDELME--KMSKRTVRVSREQLEEAKKLLQL 151
Query: 249 FGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
G+P + AP EAEAQCA L V T+D D FGA + ++
Sbjct: 152 MGIPVVQAPSEAEAQCAELVKKKKAWAVATEDMDALTFGAPVMLRHL 198
>gi|57099749|ref|XP_533271.1| PREDICTED: flap endonuclease 1 isoform 1 [Canis lupus familiaris]
Length = 380
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|4758356|ref|NP_004102.1| flap endonuclease 1 [Homo sapiens]
gi|114637922|ref|XP_001149352.1| PREDICTED: flap endonuclease 1 isoform 2 [Pan troglodytes]
gi|297688500|ref|XP_002821719.1| PREDICTED: flap endonuclease 1 isoform 1 [Pongo abelii]
gi|297688502|ref|XP_002821720.1| PREDICTED: flap endonuclease 1 isoform 2 [Pongo abelii]
gi|332836633|ref|XP_001149490.2| PREDICTED: flap endonuclease 1 isoform 4 [Pan troglodytes]
gi|397516600|ref|XP_003828512.1| PREDICTED: flap endonuclease 1 isoform 1 [Pan paniscus]
gi|397516602|ref|XP_003828513.1| PREDICTED: flap endonuclease 1 isoform 2 [Pan paniscus]
gi|410045196|ref|XP_003951955.1| PREDICTED: flap endonuclease 1 [Pan troglodytes]
gi|426368750|ref|XP_004051365.1| PREDICTED: flap endonuclease 1 isoform 1 [Gorilla gorilla gorilla]
gi|426368752|ref|XP_004051366.1| PREDICTED: flap endonuclease 1 isoform 2 [Gorilla gorilla gorilla]
gi|426368754|ref|XP_004051367.1| PREDICTED: flap endonuclease 1 isoform 3 [Gorilla gorilla gorilla]
gi|729475|sp|P39748.1|FEN1_HUMAN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=DNase
IV; AltName: Full=Flap structure-specific endonuclease
1; AltName: Full=Maturation factor 1; Short=MF1;
Short=hFEN-1
gi|21668123|gb|AAM74238.1|AF523117_1 flap structure-specific endonuclease 1 [Homo sapiens]
gi|642090|gb|AAA91331.1| endonuclease [Homo sapiens]
gi|704377|gb|AAB32522.1| DNase IV=nuclear 42 kda 5' -> 3' exonuclease [human, HeLa cells,
Peptide, 380 aa]
gi|3169155|gb|AAC23394.1| FEN1_HUMAN [Homo sapiens]
gi|3980293|emb|CAA54166.1| flap endonuclease-1 [Homo sapiens]
gi|12653113|gb|AAH00323.1| Flap structure-specific endonuclease 1 [Homo sapiens]
gi|49168608|emb|CAG38799.1| FEN1 [Homo sapiens]
gi|54695918|gb|AAV38331.1| flap structure-specific endonuclease 1 [Homo sapiens]
gi|60813555|gb|AAX36265.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|60813577|gb|AAX36266.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61355090|gb|AAX41100.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61355958|gb|AAX41194.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61362985|gb|AAX42314.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|119594378|gb|EAW73972.1| flap structure-specific endonuclease 1 [Homo sapiens]
gi|189053461|dbj|BAG35627.1| unnamed protein product [Homo sapiens]
gi|208968397|dbj|BAG74037.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|410220904|gb|JAA07671.1| flap structure-specific endonuclease 1 [Pan troglodytes]
gi|410267972|gb|JAA21952.1| flap structure-specific endonuclease 1 [Pan troglodytes]
gi|410301536|gb|JAA29368.1| flap structure-specific endonuclease 1 [Pan troglodytes]
gi|410335329|gb|JAA36611.1| flap structure-specific endonuclease 1 [Pan troglodytes]
Length = 380
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|291409580|ref|XP_002721064.1| PREDICTED: flap structure-specific endonuclease 1 [Oryctolagus
cuniculus]
Length = 380
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|195127377|ref|XP_002008145.1| GI11983 [Drosophila mojavensis]
gi|193919754|gb|EDW18621.1| GI11983 [Drosophila mojavensis]
Length = 751
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 29/176 (16%)
Query: 138 CNIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFV 197
C + K+ +DL V L+ + H P HL L+ R C L++ ++ PVFV
Sbjct: 20 CELRGKKVAIDLAGWVCESLNVVDYFVH-------PRHHLKNLFFRTCYLIWEQVTPVFV 72
Query: 198 FDGGVPQLKKQTISTLEKDRDQLLLERGK------------------QTRLASTITEQMS 239
+G P+LK Q I+ R++L + ++ T +
Sbjct: 73 LEGVAPKLKSQVIAK----RNELQFRGARPKDKDKDKDAVGPTQAVAKSDKGRTRFNHVL 128
Query: 240 REAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
++ + LL G+ + PGEAEA CA L GVI+ DSD + +GA VY+NF
Sbjct: 129 KQCENLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVISQDSDCFAYGAVRVYRNF 184
>gi|300120756|emb|CBK20998.2| unnamed protein product [Blastocystis hominis]
Length = 126
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+SIWLHQ+ G +VPNAH+ + R+CKL+F+ IKPV VFDG P LKKQ
Sbjct: 27 LAVDISIWLHQIIHAMRTPTGETVPNAHIYIVIFRLCKLIFYGIKPVIVFDGDAPALKKQ 86
Query: 209 TISTLEKDRDQLLLERGK 226
TL++ R++ ER K
Sbjct: 87 ---TLKRRREK--AERAK 99
>gi|61365237|gb|AAX42675.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61365242|gb|AAX42676.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61369466|gb|AAX43341.1| flap structure-specific endonuclease 1 [synthetic construct]
Length = 381
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|311977771|ref|YP_003986891.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
mimivirus]
gi|82000308|sp|Q5UQW7.1|YL386_MIMIV RecName: Full=Putative endonuclease L386
gi|55417005|gb|AAV50655.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
mimivirus]
gi|308204373|gb|ADO18174.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
mimivirus]
gi|339061318|gb|AEJ34622.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
mimivirus]
Length = 473
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 29/159 (18%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ ++++ G +G S+ N +HL G+++ + L I P++VFDG P +
Sbjct: 57 DASLAIYRMVYGKLK-SGPSLVNREGKLTSHLRGIFYNVLTFLQNDIIPIYVFDGKAPDI 115
Query: 206 KKQTIST--LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQ 263
K +TI L KDR +L T + +E Q LL L G+P+I+APGEA+
Sbjct: 116 KSKTIEKRKLRKDRFKL--------------TSEDIKEVQILLDLMGIPYIIAPGEADVI 161
Query: 264 CASL------ELGNHTQGVITDDSDIWLFGARTVYKNFF 296
C+ L + +GV T+DSD+ GA ++K+
Sbjct: 162 CSWLCARHDSNGKRYVKGVCTEDSDMLPLGAPYMFKDML 200
>gi|237836211|ref|XP_002367403.1| flap endonuclease-1, putative [Toxoplasma gondii ME49]
gi|211965067|gb|EEB00263.1| flap endonuclease-1, putative [Toxoplasma gondii ME49]
gi|221505908|gb|EEE31543.1| flap endonuclease-1, putative [Toxoplasma gondii VEG]
Length = 552
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN---------AHLIGLYHRICKLLFFKIKPVFVFDGGV 202
D S+ L+Q D G S N +H+ G+ +R +LL ++PV+VFDG
Sbjct: 34 DASMSLYQFMVAIRD--GNSFGNFTNDAGDCTSHIAGMLNRAIRLLEQGVRPVYVFDGKP 91
Query: 203 PQLKKQTIS-----------TLEKDRDQLLLER-GKQTRLASTITEQMSREAQELLQLFG 250
P+LK ++ EK R++ +E KQ + +++Q + + + LL+L G
Sbjct: 92 PELKSGELAKRRELRESAQEAAEKAREEGNVEELRKQIVRSVRVSKQHNEDVKRLLRLMG 151
Query: 251 VPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
+P + AP EAEAQCA L T+D+D FGA + +N
Sbjct: 152 LPVVEAPCEAEAQCAELTKNRKVWATATEDADALTFGATRLIRNL 196
>gi|443898824|dbj|GAC76158.1| hypothetical protein PANT_19d00141 [Pseudozyma antarctica T-34]
Length = 650
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 72/144 (50%), Gaps = 25/144 (17%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D S+WL + + GGS P L L++R+ KLL + +FVFDG
Sbjct: 42 DASLWLFHAQQSS----GGSNPALRL--LFYRLAKLLALPVLVLFVFDGP---------- 85
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
D+ +RGKQ + EQ EL++ FG ++ APGEAEAQ AS+
Sbjct: 86 ------DRPAWKRGKQVKGRQHAVEQ---PLTELIEAFGFSWMRAPGEAEAQLASMSREG 136
Query: 272 HTQGVITDDSDIWLFGARTVYKNF 295
V+TDD+D LFGA+ V +N+
Sbjct: 137 VLDAVVTDDADALLFGAQVVIRNW 160
>gi|351737540|gb|AEQ60575.1| putative endonuclease of the XPG family [Acanthamoeba castellanii
mamavirus]
gi|398257219|gb|EJN40827.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
lentillevirus]
Length = 473
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 29/159 (18%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ ++++ G +G S+ N +HL G+++ + L I P++VFDG P +
Sbjct: 57 DASLAIYRMVYGKLK-SGPSLVNREGKLTSHLRGIFYNVLTFLQNDIIPIYVFDGKAPDI 115
Query: 206 KKQTIST--LEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQ 263
K +TI L KDR +L T + +E Q LL L G+P+I+APGEA+
Sbjct: 116 KSKTIEKRKLRKDRFKL--------------TSEDIKEVQILLDLMGIPYIIAPGEADVI 161
Query: 264 CASL------ELGNHTQGVITDDSDIWLFGARTVYKNFF 296
C+ L + +GV T+DSD+ GA ++K+
Sbjct: 162 CSWLCARHDSNGKRYVKGVCTEDSDMLPLGAPYMFKDML 200
>gi|189192965|ref|XP_001932821.1| flap structure-specific endonuclease [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978385|gb|EDU45011.1| flap structure-specific endonuclease [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 936
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 31/162 (19%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIWL Q+ GG+ N L Y+R+ +L+ I P+FVFDG
Sbjct: 38 DTSIWLFQIQASK----GGT--NPALRTFYYRLLRLIALAIHPIFVFDGP---------- 81
Query: 212 TLEKDRDQLLLERGKQTRL-ASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
++ +R K+T ++I E + A++LL+ FG P +APGEAEA+CA L+
Sbjct: 82 ------NKPPFKRNKRTGPNVASIPEFL---AKQLLKQFGYPIHLAPGEAEAECALLQRE 132
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKS-----HVLRYTA 307
V+++D D +FG+ +N+ +KS HV Y A
Sbjct: 133 GIVDAVLSEDVDTLMFGSGITIRNWSPEKSGNTPTHVNVYDA 174
>gi|146302997|ref|YP_001190313.1| flap endonuclease-1 [Metallosphaera sedula DSM 5348]
gi|145701247|gb|ABP94389.1| flap endonuclease 1 [Metallosphaera sedula DSM 5348]
Length = 300
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEK------------DRDQLLL 222
+HL G+++R LL I P++VFDG P+LK Q + K +
Sbjct: 9 SHLNGVFYRTVNLLEEGIIPIYVFDGKPPELKAQELENRRKMKEEAEKKLEKAKESGKVE 68
Query: 223 ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
E K +++ S +T M++E++ELL+ GVP + AP E EA+ A L T + D D
Sbjct: 69 EMRKYSQMTSRLTTDMAKESKELLEYMGVPTVQAPSEGEAEAAYLNAKGITYASASQDYD 128
Query: 283 IWLFGARTVYKNF 295
LFGA + +N
Sbjct: 129 SLLFGAEKLIRNL 141
>gi|332029054|gb|EGI69068.1| Flap endonuclease GEN [Acromyrmex echinatior]
Length = 736
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 69/136 (50%), Gaps = 7/136 (5%)
Query: 166 DLAGGSVPNAHLIG------LYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ 219
DL+G V + ++ +Y R L I PVFV +G P LK +TI+ R +
Sbjct: 30 DLSGWIVDSQTIVDNMVQPRMYLRNLYFLVHGIFPVFVLEGKPPILKHKTIARRNDVRSR 89
Query: 220 LLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITD 279
ER + T ++ E +ELL+ GV + + GEAEA CA L G I+
Sbjct: 90 FQ-ERKTAKKGGRTQFNRVLNECKELLRYMGVACVQSYGEAEAMCAYLNEDGLVDGCISQ 148
Query: 280 DSDIWLFGARTVYKNF 295
DSD +L+GA+ VY+NF
Sbjct: 149 DSDCFLYGAKVVYRNF 164
>gi|148230426|ref|NP_001080960.1| flap endonuclease 1-A [Xenopus laevis]
gi|82071385|sp|P70040.1|FEN1A_XENLA RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A;
Short=xFEN-1a
gi|1490870|gb|AAB06176.1| 5' nuclease xFEN1a [Xenopus laevis]
gi|4106358|gb|AAD02814.1| flap endonuclease 1 [Xenopus laevis]
gi|213623454|gb|AAI69765.1| 5' nuclease xFEN1a [Xenopus laevis]
gi|213625072|gb|AAI69761.1| 5' nuclease xFEN1a [Xenopus laevis]
Length = 382
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 12/126 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLLERG----- 225
+HL+G+++R +++ IKPV+VFDG PQ+K ++ + R ++LL
Sbjct: 61 TSHLMGMFYRTIRMVEHGIKPVYVFDGKPPQMKSGELAKRSERRAEAEKLLEAAEEAGEV 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E ++LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 ENIEKFTKRLVKVTKQHNEECKKLLTLMGIPYVDAPCEAEATCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFG 287
D FG
Sbjct: 181 DALTFG 186
>gi|74612809|sp|Q76F73.1|FEN1_COPCI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|46092541|dbj|BAD14303.1| flap endonuclease-1 [Coprinopsis cinerea]
Length = 458
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 26/141 (18%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIST-------------------LE 214
+HL+G ++R +++ IKP +VFDG P+LKK +S
Sbjct: 62 TSHLMGFFYRTIRIVENGIKPAYVFDGKPPELKKGVLSKRFEKREEAKEEGEEAKEIGTA 121
Query: 215 KDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQ 274
+D D+ +R +T+Q + E Q+LL+L VP ++AP EAEAQCA L G
Sbjct: 122 EDVDRF-------SRRTVKVTKQHNEECQKLLRLMSVPCVIAPSEAEAQCAELARGGKVY 174
Query: 275 GVITDDSDIWLFGARTVYKNF 295
++D D F A ++++
Sbjct: 175 AAGSEDMDTLTFNAPILFRHL 195
>gi|2674207|gb|AAB88707.1| flap endonuclease 1 [Xenopus laevis]
gi|115528353|gb|AAI24978.1| Fen1-A protein [Xenopus laevis]
Length = 382
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 12/126 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLLERG----- 225
+HL+G+++R +++ IKPV+VFDG PQ+K ++ + R ++LL
Sbjct: 61 TSHLMGMFYRTIRMVEHGIKPVYVFDGKPPQMKSGELAKRSERRAEAEKLLEAAEEAGEV 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E ++LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 ENIEKFTKRLVKVTKQHNEECKKLLTLMGIPYVDAPCEAEATCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFG 287
D FG
Sbjct: 181 DALTFG 186
>gi|353240941|emb|CCA72785.1| related to EXO1-exonuclease which interacts with Msh2p
[Piriformospora indica DSM 11827]
Length = 827
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 149 LISDVSIWLHQLTKG-THDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK 207
L D +WLH+ G +LA G ++ HRI L ++ I+P VFDGG K+
Sbjct: 27 LAVDGYVWLHKGAYGCATELATGKPTTKYIDYAMHRIRLLRYYGIEPYLVFDGGPLPAKE 86
Query: 208 QTISTLEKDRDQLLLE------RGKQTR---LASTITEQMSREAQELLQLF---GVPFIV 255
T K+R++ L + RG+ + L + + + A +L++ V ++V
Sbjct: 87 GTELERRKNREESLAKAKQLASRGRHSEARDLYARCVDISPKHAFQLIKALRAESVAYVV 146
Query: 256 APGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVY 292
AP EA+AQ A LE QG++T+DSD+ +FG + VY
Sbjct: 147 APYEADAQLAYLERSGIVQGILTEDSDLLVFGCQNVY 183
>gi|431910392|gb|ELK13465.1| Flap endonuclease 1 [Pteropus alecto]
Length = 381
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL--LLERG------ 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + L++
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKRLQQAQDVGTE 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EDVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|449520116|ref|XP_004167080.1| PREDICTED: flap endonuclease GEN-like 2-like, partial [Cucumis
sativus]
Length = 299
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 18/174 (10%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D+S W+ +L+ + S +L GL++R+ L+ +FV DG +P +K
Sbjct: 27 LCIDLSCWIVELSSVSKSHCH-SNSKFYLKGLFYRLRTLIALNCSLIFVTDGSIPGIKLS 85
Query: 209 T----------ISTLEKDRDQLL-LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAP 257
T ++ + + Q+ L+R K + + I +EAQ L G+P + A
Sbjct: 86 TYRRRLNNGNEVAQTDANPQQICSLKRNKGSEFSLMI-----KEAQALGLALGIPCLDAV 140
Query: 258 GEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF-FDKKSHVLRYTAPDI 310
EAEAQCA L G T DSD +LFGARTVY++ HV+ Y DI
Sbjct: 141 EEAEAQCALLNSELLCDGCFTSDSDAFLFGARTVYRDICLGDSGHVVCYEMDDI 194
>gi|432089490|gb|ELK23431.1| Flap endonuclease 1 [Myotis davidii]
Length = 380
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLL----------- 222
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R +
Sbjct: 61 TSHLMGMFYRTIRMIENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLHQAQAAGAE 120
Query: 223 -ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|26335423|dbj|BAC31412.1| unnamed protein product [Mus musculus]
Length = 380
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERG-- 225
+HL+G+++R +++ IKPV+V DG PQLK ++ + R Q E G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVLDGKPPQLKSGELAKRSERRAEAEKQLQQAQEAGME 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|367008554|ref|XP_003678778.1| hypothetical protein TDEL_0A02350 [Torulaspora delbrueckii]
gi|359746435|emb|CCE89567.1| hypothetical protein TDEL_0A02350 [Torulaspora delbrueckii]
Length = 380
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 17/156 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q G + +HL+G+++R +++ IKP +VFDG P +
Sbjct: 34 DASMSLYQFLIAVRQQDGAQLSTETGETTSHLMGIFYRTLRMIDNGIKPCYVFDGKPPVM 93
Query: 206 KKQTISTLEKDRDQL---------LLERGKQTRLASTITEQMSREAQELLQLFGVPFIVA 256
K + R++ E+ KQ R ++++ + EA++LL+L GVP++ A
Sbjct: 94 KSHELGKRSSRREETEKKLAEAIDQAEKMKQERRLVRVSKEHNDEAKQLLELMGVPYLTA 153
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVY 292
P EAEAQCA L ++D D + RT Y
Sbjct: 154 PTEAEAQCAELAKKGKVYAAASEDMDTLCY--RTPY 187
>gi|124800975|ref|XP_001349570.1| DNA repair endonuclease, putative [Plasmodium falciparum 3D7]
gi|3845138|gb|AAC71842.1| DNA repair endonuclease, putative [Plasmodium falciparum 3D7]
Length = 1516
Score = 75.9 bits (185), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/96 (39%), Positives = 59/96 (61%)
Query: 210 ISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
I K+ ++L+ E K + I ++M+ + + LL FG+P+I +P EAEAQC+ L
Sbjct: 1183 IKETNKENEELIKEYKKLKKNNIEINDEMNDDIKLLLNFFGIPYIQSPCEAEAQCSYLNN 1242
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
N+ +I+DDSD+ +F +TV KNFF+KK V Y
Sbjct: 1243 KNYCDAIISDDSDVLVFSGKTVIKNFFNKKKTVEVY 1278
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 28/87 (32%)
Query: 152 DVSIWLHQLTKGTH--DLAGGSVPN--------------------------AHLIGLYHR 183
DVSIWL++LT + DL S N AHL + R
Sbjct: 30 DVSIWLYELTYANNVKDLRNKSFDNMSIFNDLWIDFSENISSEIKTDNIKKAHLYFFFLR 89
Query: 184 ICKLLFFKIKPVFVFDGGVPQLKKQTI 210
ICKLL++ I+P+F+FDG P+LK++TI
Sbjct: 90 ICKLLYYNIRPIFIFDGNPPELKRKTI 116
>gi|159040632|ref|YP_001539884.1| flap endonuclease-1 [Caldivirga maquilingensis IC-167]
gi|189044441|sp|A8M9L3.1|FEN_CALMQ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|157919467|gb|ABW00894.1| XPG I [Caldivirga maquilingensis IC-167]
Length = 350
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------LERGKQ 227
+HL GL +R LL + IKPV+VFDG P+LK I + R++ + +E GK+
Sbjct: 59 TSHLSGLLYRTINLLEYGIKPVYVFDGKPPELKLIEIEKRRRVREKAVEDWIKAVEEGKK 118
Query: 228 T------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
+ + A IT M EA+ LL GVP++ AP E EAQ A + + D
Sbjct: 119 SEARKYAQRALFITSDMVDEAKRLLDSMGVPWVQAPSEGEAQAAYMASKGIVWAAGSQDY 178
Query: 282 DIWLFGARTVYKNF 295
D +LFGA + +N
Sbjct: 179 DSFLFGAPRLVRNL 192
>gi|389852752|ref|YP_006354986.1| flap endonuclease-1 [Pyrococcus sp. ST04]
gi|388250058|gb|AFK22911.1| flap endonuclease-1 [Pyrococcus sp. ST04]
Length = 341
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 143 NKLLVDLISDVSIWLHQLTK--GTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDG 200
K+ +D ++ + +L + + GT + +HL GL++R L+ IKP +VFDG
Sbjct: 22 RKVAIDALNAIYQFLSTIRQRDGTPLMDSKGRITSHLSGLFYRTINLMEAGIKPAYVFDG 81
Query: 201 GVPQLKKQTISTLEKDRDQL------LLERG------KQTRLASTITEQMSREAQELLQL 248
P+ KK+ + ++ R++ L +G K + A+ + E + +A++LL+L
Sbjct: 82 KPPEFKKRELEKRKEAREEAEIKWKEALAKGDIEEARKYAQRATRVNEMLIEDAKKLLEL 141
Query: 249 FGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
G+P I AP E EAQ A + + D D LFGA + +N
Sbjct: 142 MGIPVIQAPSEGEAQAAYMASKGKVYASASQDYDSLLFGAPRLVRNL 188
>gi|212526840|ref|XP_002143577.1| Rad2-like endonuclease, putative [Talaromyces marneffei ATCC 18224]
gi|210072975|gb|EEA27062.1| Rad2-like endonuclease, putative [Talaromyces marneffei ATCC 18224]
Length = 863
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 22/154 (14%)
Query: 142 INKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGG 201
++K + + D+SIWL QL G GG N L L+ R+ +LL I P+FV+DG
Sbjct: 28 VSKRPIRIAVDISIWLFQLQAGR----GGQ--NPELRTLFFRLVRLLALPIHPLFVYDG- 80
Query: 202 VPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAE 261
+ + +RGK T S + + ++ L+ LF P APGEAE
Sbjct: 81 ---------------KQKPPFKRGKATTGRSYGSAPIINLSKILIDLFKFPRHDAPGEAE 125
Query: 262 AQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
A+CA L+ V+++D D +FG+ NF
Sbjct: 126 AECARLQQAGVVDAVMSNDVDTLMFGSGLTVMNF 159
>gi|396498478|ref|XP_003845243.1| similar to flap structure-specific endonuclease [Leptosphaeria
maculans JN3]
gi|312221824|emb|CBY01764.1| similar to flap structure-specific endonuclease [Leptosphaeria
maculans JN3]
Length = 935
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 31/162 (19%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIWL Q+ GG+ N L Y+R+ +L+ I PVFVFDG
Sbjct: 38 DTSIWLFQIQAS----KGGT--NPALRTFYYRLLRLIALSIHPVFVFDGP---------- 81
Query: 212 TLEKDRDQLLLERGKQTRL-ASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
++ +R K+T ++I E + A++LL+ FG P +APGEAEA+CA L+
Sbjct: 82 ------NKPPFKRNKRTGPNVASIPEFL---AKQLLKQFGFPIHLAPGEAEAECALLQRE 132
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKS-----HVLRYTA 307
V+++D D +FG+ +N+ +KS HV Y A
Sbjct: 133 GIVDAVLSEDVDTLMFGSGITLRNWSPEKSGNTPTHVNVYDA 174
>gi|49619155|gb|AAT68162.1| flap structure specific endonuclease 1 [Danio rerio]
Length = 380
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLL---ERGKQ 227
+HL+G+++R ++L IKPV+VFDG PQLK + + R ++LL E G+Q
Sbjct: 61 TSHLMGMFYRTIRMLESGIKPVYVFDGKPPQLKSGELEKRVERRAEAEKLLAQAQEAGEQ 120
Query: 228 ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
++ +T+Q + E ++LL L GVP+I AP EAEA CA+L T+D
Sbjct: 121 ENIDKFSKRLVKVTKQHNEECKKLLSLMGVPYIEAPCEAEASCAALVKAGKVYATATEDM 180
Query: 282 DIWLFGARTVYKNF 295
FG + ++
Sbjct: 181 AGLTFGTTVLLRHL 194
>gi|126460720|ref|YP_001056998.1| flap endonuclease-1 [Pyrobaculum calidifontis JCM 11548]
gi|166973705|sp|A3MY15.1|FEN_PYRCJ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|126250441|gb|ABO09532.1| flap endonuclease 1 [Pyrobaculum calidifontis JCM 11548]
Length = 346
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTR---- 229
+HL GL++R LL +KPV+VFDG P+ K I +K +++ L E K R
Sbjct: 59 TSHLSGLFYRTINLLEAGVKPVYVFDGKPPEFKLLEIEQRKKAKEKALEEVEKAIREGRR 118
Query: 230 --------LASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
A +T +M +A++LL G+P++ AP E EAQ A + H V + D
Sbjct: 119 EDVAKYAKRAIFLTSEMVEDAKKLLTYMGIPWVQAPSEGEAQAAHMAKRGHCWAVGSQDY 178
Query: 282 DIWLFGARTVYKNF 295
D LFG+ + +N
Sbjct: 179 DSLLFGSPRLVRNL 192
>gi|443894995|dbj|GAC72341.1| hypothetical protein PANT_7d00055 [Pseudozyma antarctica T-34]
Length = 373
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS-----------TLEKDRDQLLL 222
+HL+G ++R +++ + IKP++VFDG P LKK+ + E+ +D +
Sbjct: 62 TSHLLGFFYRTLRMIDYGIKPMYVFDGTPPDLKKELLKKRFGRREEAREQEEEQKDVADV 121
Query: 223 ERGKQ-TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E+ Q R T Q + E ++LL+L G+P ++AP EAEAQCA L ++D
Sbjct: 122 EKMDQLARRQVRPTRQHNEEVRQLLKLMGIPCVIAPSEAEAQCAELARAGKVYAAGSEDM 181
Query: 282 DIWLFGARTVYKNF 295
D FG + K+
Sbjct: 182 DTLTFGTPILLKHL 195
>gi|18977786|ref|NP_579143.1| flap endonuclease-1 [Pyrococcus furiosus DSM 3638]
gi|397651906|ref|YP_006492487.1| flap endonuclease-1 [Pyrococcus furiosus COM1]
gi|28380014|sp|O93634.1|FEN_PYRFU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|6980604|pdb|1B43|A Chain A, Fen-1 From P. Furiosus
gi|6980605|pdb|1B43|B Chain B, Fen-1 From P. Furiosus
gi|4102602|gb|AAD01514.1| endo/exonuclease [Pyrococcus furiosus DSM 3638]
gi|18893531|gb|AAL81538.1| flap structure-specific endonuclease [Pyrococcus furiosus DSM 3638]
gi|393189497|gb|AFN04195.1| flap endonuclease-1 [Pyrococcus furiosus COM1]
Length = 340
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 139 NIVINKLLVDLISDVSIWLHQLTK--GTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVF 196
N+ K+ +D ++ + +L + + GT + +HL GL++R L+ IKPV+
Sbjct: 18 NLYGKKIAIDALNAIYQFLSTIRQKDGTPLMDSKGRITSHLSGLFYRTINLMEAGIKPVY 77
Query: 197 VFDGGVPQLKKQTISTLEKDRDQLL------LERG------KQTRLASTITEQMSREAQE 244
VFDG P+ KK+ + + R++ LE+G K + A+ + E + +A++
Sbjct: 78 VFDGEPPEFKKKELEKRREAREEAEEKWREALEKGEIEEARKYAQRATRVNEMLIEDAKK 137
Query: 245 LLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
LL+L G+P + AP E EAQ A + + D D LFGA + +N
Sbjct: 138 LLELMGIPIVQAPSEGEAQAAYMAAKGSVYASASQDYDSLLFGAPRLVRNL 188
>gi|74219985|dbj|BAE40572.1| unnamed protein product [Mus musculus]
Length = 380
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERG-- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R Q E G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQEAGME 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEGM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|395852526|ref|XP_003798789.1| PREDICTED: flap endonuclease 1 [Otolemur garnettii]
Length = 380
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+G+++R +++ IKPV++FDG PQLK ++ + R + +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYIFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|168066677|ref|XP_001785260.1| predicted protein [Physcomitrella patens subsp. patens]
gi|317374868|sp|A9U328.1|FEN12_PHYPA RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
gi|162663130|gb|EDQ49912.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 349
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 79/144 (54%), Gaps = 16/144 (11%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK--------------QTISTLEKDRDQ 219
+HLIG+++R ++L +KPV+VFDG P++K ++++T + + ++
Sbjct: 62 TSHLIGMFNRTIRVLEAGLKPVYVFDGKPPEMKGGELAKRLARREEAVESLATAKLEGNE 121
Query: 220 LLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITD 279
+E K ++ +T+Q + + ++LL+L GVP + AP EAEA+CASL V ++
Sbjct: 122 ADME--KYSKRTVKVTKQHNEDCRKLLRLMGVPVVEAPSEAEAECASLCKTGKVYAVASE 179
Query: 280 DSDIWLFGARTVYKNFFDKKSHVL 303
D D FG+ ++ + S L
Sbjct: 180 DMDSLTFGSTRFLRHLMEPVSRKL 203
>gi|50310391|ref|XP_455215.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74605424|sp|Q6CLH4.1|FEN1_KLULA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|49644351|emb|CAG97923.1| KLLA0F02992p [Kluyveromyces lactis]
Length = 381
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAST 233
+HL+G+++R +++ IKP +VFDG P+LKK + + R+ + + T A
Sbjct: 62 TSHLMGMFYRTLRMIDHGIKPCYVFDGSPPELKKYELDKRKVRREDTEAKLKEATEQAEI 121
Query: 234 ITEQM---------SREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIW 284
I + + EAQ+LL L G+P++VAP EAEAQCA L ++D D
Sbjct: 122 IKHERRLVKVLPWHNEEAQKLLSLMGIPYVVAPAEAEAQCAELAKSGKVFAAASEDMDTL 181
Query: 285 LF 286
+
Sbjct: 182 CY 183
>gi|119490963|ref|XP_001263142.1| Rad2-like endonuclease, putative [Neosartorya fischeri NRRL 181]
gi|119411302|gb|EAW21245.1| Rad2-like endonuclease, putative [Neosartorya fischeri NRRL 181]
Length = 888
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 147 VDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
+ + D+SIWL Q+ G GG N L L++R+ K L I P+FV+DG
Sbjct: 39 IRIAVDISIWLFQVQAGR----GGR--NPELRTLFYRLLKFLALPIHPLFVYDG------ 86
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+D+ +RGK S + R ++ L+ LF P APGEAEA+CA
Sbjct: 87 ----------KDKPPFKRGKAVSGRSYGNAPIIRLSKVLIDLFKFPRHDAPGEAEAECAR 136
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNF 295
L+ V+++D D +FG+ NF
Sbjct: 137 LQRAGVVDAVMSNDVDALMFGSTLTVMNF 165
>gi|254585117|ref|XP_002498126.1| ZYRO0G02860p [Zygosaccharomyces rouxii]
gi|317376173|sp|C5DZA9.1|FEN1_ZYGRC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|238941020|emb|CAR29193.1| ZYRO0G02860p [Zygosaccharomyces rouxii]
Length = 379
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 19/152 (12%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVP-- 203
D S+ L+Q G + +HL+G+++R +++ IKP +VFDG P
Sbjct: 34 DASMSLYQFLIAVRQQDGAQLSTESGETTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPIL 93
Query: 204 ---QLKKQ------TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFI 254
+LKK+ T LE+ DQ E+ KQ R ++ + + EA+ LL+L G+P+I
Sbjct: 94 KSFELKKRSDKRVDTEKKLEEAVDQA--EKLKQERRLVKVSPEHNDEAKYLLKLMGIPYI 151
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
VAP EAEAQCA L ++D D +
Sbjct: 152 VAPCEAEAQCAQLAKDGKVYAAASEDMDTLCY 183
>gi|317374918|sp|C1BM18.1|FEN1_OSMMO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|225708450|gb|ACO10071.1| Flap endonuclease 1-B [Osmerus mordax]
Length = 380
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLL---ERGKQ 227
+HL+G+++R ++L IKPV+VFDG PQLK + + R ++LL E G+Q
Sbjct: 61 TSHLMGMFYRTIRMLENGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQEAGEQ 120
Query: 228 ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
++ +T Q + E ++LL L GVP++ AP EAEA CA+L T+D
Sbjct: 121 ENIDKFSKRLVKVTRQHNDECKKLLTLMGVPYVEAPCEAEASCAALVKAGKVFATATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG + ++
Sbjct: 181 DGLTFGTGVLLRHL 194
>gi|341882587|gb|EGT38522.1| hypothetical protein CAEBREN_12338 [Caenorhabditis brenneri]
gi|341895701|gb|EGT51636.1| hypothetical protein CAEBREN_24192 [Caenorhabditis brenneri]
Length = 382
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 12/139 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------LLERG-- 225
+HL+G+++R +++ IKPV+VFDG P +K + + R + E+G
Sbjct: 61 TSHLMGMFYRTIRMIDNGIKPVYVFDGKPPDMKSGELEKRSERRAEAEKALTEAKEKGDA 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K R +T+Q + E + LL L G+P + AP EAEAQCA L G T+D
Sbjct: 121 KEAEKFERRLVKVTKQQNEEVKHLLGLMGIPVVEAPCEAEAQCAHLVKAGKVFGTATEDM 180
Query: 282 DIWLFGARTVYKNFFDKKS 300
D FG+ + ++ +S
Sbjct: 181 DALTFGSSVLLRHLLAPES 199
>gi|307102466|gb|EFN50740.1| hypothetical protein CHLNCDRAFT_37697 [Chlorella variabilis]
Length = 389
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 12/126 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERG-- 225
+HL G++ R ++L +KPVFVF+G P+LK++ ++ R+ + E G
Sbjct: 62 TSHLQGMFFRTVRMLEAGMKPVFVFEGKAPELKREELAKRSNRREDANTELEAAKEAGNA 121
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K ++ +T + + E + LL+L GVP + AP EAEAQCA L G+ T+D
Sbjct: 122 EDVEKYSKRTVRVTREHNEECKRLLRLMGVPVLEAPSEAEAQCAQLCKDGLVYGISTEDM 181
Query: 282 DIWLFG 287
D FG
Sbjct: 182 DSLTFG 187
>gi|170111659|ref|XP_001887033.1| predicted protein [Laccaria bicolor S238N-H82]
gi|317374862|sp|B0DSN9.1|FEN11_LACBS RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A
gi|164638076|gb|EDR02356.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 394
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS--------------------TL 213
+HL+GL++R +++ IKP ++FDG P+LKK +S T+
Sbjct: 62 TSHLMGLFYRTLRIVENGIKPAYIFDGKPPELKKGVLSKRLERREEAKEEGEEAKETGTV 121
Query: 214 EKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
E D D+ +R +T + + E + LL+L G+P ++AP EAEAQCA L G
Sbjct: 122 E-DVDRF-------SRRTVKVTREHNEECRRLLRLMGIPVVIAPSEAEAQCAELARGGKV 173
Query: 274 QGVITDDSDIWLFGARTVYKNF 295
++D D F A ++++
Sbjct: 174 YAAGSEDMDTLTFNAPILFRHL 195
>gi|345563417|gb|EGX46418.1| hypothetical protein AOL_s00109g176 [Arthrobotrys oligospora ATCC
24927]
Length = 610
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+SIW Q +K + GS NA L +Y+R+C LL I VFVFDG
Sbjct: 38 DISIWAFQ-SKAVQGRSTGS--NAPLRVIYYRLCSLLSLNIHAVFVFDG----------- 83
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
KDR + +RGK SR L+ FG P APGEAEA+CA L+
Sbjct: 84 ---KDRPEF--KRGKSISGGEGYLLAFSRR---LITAFGFPIHNAPGEAEAECAYLQKQG 135
Query: 272 HTQGVITDDSDIWLFGARTVYKNFFDKKSHVL 303
V+++D D +FG R +++ S L
Sbjct: 136 IVDAVLSEDVDTLMFGCRQSWRSCEKGDSKTL 167
>gi|148234716|ref|NP_001080984.1| flap endonuclease 1-B [Xenopus laevis]
gi|82071413|sp|P70054.1|FEN1B_XENLA RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B;
Short=xFEN-1b
gi|1549393|gb|AAB08478.1| XFEN1b [Xenopus laevis]
gi|213623174|gb|AAI69390.1| Flap endonuclease 1 [Xenopus laevis]
gi|213626408|gb|AAI69394.1| Flap endonuclease 1 [Xenopus laevis]
Length = 382
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 12/126 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLLERG----- 225
+HL+G+++R ++L IKPV+VFDG PQ+K ++ + R ++LL
Sbjct: 61 TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQMKSGELAKRSERRAEAEKLLEAAEEAGEV 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K + +T+Q + E ++LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 ENIEKFNKRLVKVTKQHNEECKKLLSLMGIPYVDAPCEAEATCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFG 287
D FG
Sbjct: 181 DALTFG 186
>gi|348560389|ref|XP_003465996.1| PREDICTED: flap endonuclease 1-like [Cavia porcellus]
Length = 380
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLL----------- 222
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R +
Sbjct: 61 TSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAVGAE 120
Query: 223 -ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|379991146|ref|NP_001244014.1| flap endonuclease 1 [Equus caballus]
Length = 380
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRGERRAEAEKQLQQAQAAGAE 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|356559829|ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like [Glycine max]
Length = 588
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 82/178 (46%), Gaps = 30/178 (16%)
Query: 152 DVSIWLHQL--TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT 209
D+S W+ QL +H V +L GL+HR+ L+ +FV DG +P +K
Sbjct: 30 DLSCWMVQLHSVSKSHACVKEKV---YLRGLFHRLRALIALNCSLIFVSDGAIPAIK--- 83
Query: 210 ISTLEKDRDQLLLERGKQTRLASTITE----------------QMSREAQELLQLFGVPF 253
+ST + L GK+ ++A T M +EA+ L G+
Sbjct: 84 LSTYRRR-----LNVGKEVQVAQNETNLQKATSLQRNMGSEFSCMIKEAKVLGMALGISC 138
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF-FDKKSHVLRYTAPDI 310
+ EAEAQCA L + G + DSDI+LFGARTVY++ +V+ Y DI
Sbjct: 139 LNGIEEAEAQCALLNFESLCDGCFSSDSDIFLFGARTVYRDICLGDGGYVVCYEMTDI 196
>gi|452209484|ref|YP_007489598.1| Flap structure-specific endonuclease [Methanosarcina mazei Tuc01]
gi|452099386|gb|AGF96326.1| Flap structure-specific endonuclease [Methanosarcina mazei Tuc01]
Length = 338
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------------LL 222
+HL GL +R L+ IKPVFVFDG P++K T++ ++ R+ L
Sbjct: 56 SHLSGLLYRTASLVEAGIKPVFVFDGKPPEMKTGTLNRRKEIRESSKEKWENAKAEGNLE 115
Query: 223 ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
K + +S + + + +++ LL + G+P+I AP E EAQ A + L V + D D
Sbjct: 116 AAYKYAQASSKVDQDIIEDSKYLLDIMGIPWIQAPCEGEAQAAHMVLKKDADCVASQDYD 175
Query: 283 IWLFGARTVYKNF 295
+LFGA TV +N
Sbjct: 176 SFLFGAPTVVRNL 188
>gi|62859561|ref|NP_001017005.1| flap endonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 382
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 12/126 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLLERG----- 225
+HL+G+++R +++ IKPV+VFDG PQ+K ++ + R ++LL
Sbjct: 61 TSHLMGMFYRTIRMIEHGIKPVYVFDGKPPQMKSGELAKRSERRAEAEKLLEAAEEAGEV 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K + +T+Q + E ++LL L GVP++ AP EAEA CA+L T+D
Sbjct: 121 ENIEKFNKRLVKVTKQHNEECKKLLTLMGVPYVDAPCEAEATCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFG 287
D FG
Sbjct: 181 DALTFG 186
>gi|317376168|sp|B1H158.1|FEN1_XENTR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|169642201|gb|AAI60482.1| flap structure specific endonuclease 1 [Xenopus (Silurana)
tropicalis]
Length = 382
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 12/126 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLLERG----- 225
+HL+G+++R +++ IKPV+VFDG PQ+K ++ + R ++LL
Sbjct: 61 TSHLMGMFYRTIRMIEHGIKPVYVFDGKPPQMKSGELAKRSERRAEAEKLLEAAEEAGEV 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K + +T+Q + E ++LL L GVP++ AP EAEA CA+L T+D
Sbjct: 121 ENIEKFNKRLVKVTKQHNEECKKLLTLMGVPYVDAPCEAEATCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFG 287
D FG
Sbjct: 181 DALTFG 186
>gi|428672546|gb|EKX73459.1| flap endonuclease-1, putative [Babesia equi]
Length = 746
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 21/172 (12%)
Query: 152 DVSIWLHQLTKGTHDLAGGSV-------PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQ 204
D S L+Q D + S +H+ GL +R ++L IKP+FVFD P
Sbjct: 34 DASAALYQFAIAIRDTSYLSTLVNSKGESTSHISGLMNRCVRILEAGIKPIFVFDSTPPD 93
Query: 205 LKKQTISTLEKDRDQLLLERGKQTRLAST------------ITEQMSREAQELLQLFGVP 252
LK T+S ++ R++ + ++++ + A++LL+L G+P
Sbjct: 94 LKLDTLSKRKERREEAEASLEAAKEAGDSETIKKLVGRTVKVSKEQNNSAKQLLRLMGIP 153
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLR 304
+ A EAEAQCA L V ++DSD +FG R + +N KK VLR
Sbjct: 154 VVEAKEEAEAQCAQLVQEGIATAVASEDSDSLVFGCRILLRNLSGKK--VLR 203
>gi|167516124|ref|XP_001742403.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779027|gb|EDQ92641.1| predicted protein [Monosiga brevicollis MX1]
Length = 99
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L DVSIWLHQ+ + D G V NAH+ L R+CKLL+ +IKPVF+FDG P +K+Q
Sbjct: 27 LAVDVSIWLHQIVRAMRDRQGNLVQNAHVHALLSRLCKLLYHQIKPVFIFDGAAPAIKQQ 86
Query: 209 TIST 212
+ +
Sbjct: 87 AVVS 90
>gi|115402747|ref|XP_001217450.1| DNA-repair protein rad2 [Aspergillus terreus NIH2624]
gi|114189296|gb|EAU30996.1| DNA-repair protein rad2 [Aspergillus terreus NIH2624]
Length = 402
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 150 ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT 209
+S S + ++G ++ +HL+G+++R +++ IKP++VFDG P+LK
Sbjct: 44 MSIYSFLIAVRSEGQQLMSDTGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGE 103
Query: 210 IS--TLEKDRDQLLLERGKQT----------RLASTITEQMSREAQELLQLFGVPFIVAP 257
++ T K E K+T R +T + + E ++LL+L G+P+I AP
Sbjct: 104 LAKRTARKTEATEAHEEAKETGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYIDAP 163
Query: 258 GEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
EAEAQCA L ++D D F A
Sbjct: 164 TEAEAQCAVLARAGKVYAAASEDMDTLCFEA 194
>gi|320101275|ref|YP_004176867.1| flap endonuclease 1 [Desulfurococcus mucosus DSM 2162]
gi|319753627|gb|ADV65385.1| flap endonuclease 1 [Desulfurococcus mucosus DSM 2162]
Length = 356
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 163 GTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL- 221
GT + G +HL GL++R ++ IKPV+VFDG P+LK + I R++
Sbjct: 48 GTPLMDGSGRITSHLSGLFYRTINIVEAGIKPVYVFDGKPPELKAKEIERRRVVREEAAR 107
Query: 222 ----------LERGKQTRLAST-ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
LE ++ + S +T++M R+A+ LL G+P++ AP E EAQ A +
Sbjct: 108 KYEEAVQAGDLESARRYAMMSARLTDEMVRDAKALLDAMGIPWVQAPAEGEAQAAYMARK 167
Query: 271 NHTQGVITDDSDIWLFGARTVYKNF 295
+ D D LFG+ + +N
Sbjct: 168 GDAYASASQDYDSLLFGSPRLVRNL 192
>gi|21227008|ref|NP_632930.1| flap endonuclease-1 [Methanosarcina mazei Go1]
gi|28380015|sp|Q8PYF6.1|FEN_METMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|20905326|gb|AAM30602.1| FLAP endonuclease-1 [Methanosarcina mazei Go1]
Length = 338
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------------LL 222
+HL GL +R L+ IKPVFVFDG P++K T++ ++ R+ L
Sbjct: 56 SHLSGLLYRTASLVEAGIKPVFVFDGKPPEMKTGTLNRRKEIRESSKEKWENAKAEGNLE 115
Query: 223 ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
K + +S + + + +++ LL + G+P+I AP E EAQ A + L V + D D
Sbjct: 116 AAYKYAQASSKVDQDIIEDSKYLLDIMGIPWIQAPCEGEAQAAHMVLKKDADCVASQDYD 175
Query: 283 IWLFGARTVYKNF 295
+LFGA TV +N
Sbjct: 176 SFLFGAPTVVRNL 188
>gi|390371157|dbj|GAB65038.1| DNA repair endonuclease [Plasmodium cynomolgi strain B]
Length = 1505
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 59/91 (64%)
Query: 215 KDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQ 274
K+ +QLL E K + I E+++ + + LL +FG+P++ +P EAEAQC+ L N+
Sbjct: 1145 KENEQLLNEYKKLKKNNIEINEEINEDIKILLNMFGIPYVQSPCEAEAQCSYLNCKNYCD 1204
Query: 275 GVITDDSDIWLFGARTVYKNFFDKKSHVLRY 305
+I+DDSD+ +F +TV KNFF++K V Y
Sbjct: 1205 AIISDDSDVLVFNGKTVIKNFFNRKKTVEVY 1235
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 28/87 (32%)
Query: 152 DVSIWLHQLTKGTH----------------------------DLAGGSVPNAHLIGLYHR 183
DVSIWL++LT + D+ ++ HL + R
Sbjct: 30 DVSIWLYELTYANNLKVLRNGALDNMSIFNDLWMDFSENMNNDMRTDNLKKVHLYFFFLR 89
Query: 184 ICKLLFFKIKPVFVFDGGVPQLKKQTI 210
ICKLL++ I+P+F+FDG P+LK++TI
Sbjct: 90 ICKLLYYNIRPIFIFDGTPPELKRKTI 116
>gi|317374926|sp|Q0CBS0.2|FEN1_ASPTN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 144 KLLVDL-ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGV 202
K+ +D +S S + ++G ++ +HL+G+++R +++ IKP++VFDG
Sbjct: 30 KVAIDASMSIYSFLIAVRSEGQQLMSDTGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAP 89
Query: 203 PQLKKQTIS--TLEKDRDQLLLERGKQT----------RLASTITEQMSREAQELLQLFG 250
P+LK ++ T K E K+T R +T + + E ++LL+L G
Sbjct: 90 PKLKSGELAKRTARKTEATEAHEEAKETGTAEDVEKFSRRTVRVTREHNAECKKLLKLMG 149
Query: 251 VPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
+P+I AP EAEAQCA L ++D D F A
Sbjct: 150 IPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEA 187
>gi|260803225|ref|XP_002596491.1| hypothetical protein BRAFLDRAFT_130306 [Branchiostoma floridae]
gi|229281748|gb|EEN52503.1| hypothetical protein BRAFLDRAFT_130306 [Branchiostoma floridae]
Length = 698
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 79/158 (50%), Gaps = 18/158 (11%)
Query: 152 DVSIWLHQLT-KGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDG-GVPQLKKQT 209
D W+++ DLA G + ++ + + LL IKPV VFDG +P KQ
Sbjct: 30 DAYCWIYRGAFACAMDLARGDKSDMYVKFVLKYVNMLLSHGIKPVIVFDGCNLPS--KQG 87
Query: 210 ISTLEKDRDQLLLERGKQ-TRLAST------------ITEQMSREAQELLQLFGVPFIVA 256
+ ++R QL L++GKQ R +T +T QM+ E E + GV IVA
Sbjct: 88 VEDSRRERKQLYLQKGKQFLRDGNTAQARECFQKCINVTPQMAHEVMEACRTLGVDCIVA 147
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLFGA-RTVYK 293
P EA+AQ A L Q VIT+DSD+ FG R ++K
Sbjct: 148 PYEADAQLAYLNKCGIAQAVITEDSDLLAFGCDRVIFK 185
>gi|254168936|ref|ZP_04875776.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
gi|197622200|gb|EDY34775.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
Length = 339
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 67/134 (50%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------------L 221
+HL GL +R L IKPV+VFDG P+LK +TI K R + L
Sbjct: 55 TSHLSGLLYRTANFLAEGIKPVYVFDGRPPELKMRTIGERIKIRMEAKEAWEKALKEGNL 114
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E + + A+ +T+ M EA++LL G+P++ AP E EAQ A + T + D
Sbjct: 115 EEARSKAQQATFLTKNMVDEAKKLLDYMGIPWVQAPSEGEAQAAYMAKKGDTYASASQDF 174
Query: 282 DIWLFGARTVYKNF 295
D LFGA + +N
Sbjct: 175 DSLLFGAPNLVRNL 188
>gi|395545349|ref|XP_003774565.1| PREDICTED: flap endonuclease 1 [Sarcophilus harrisii]
Length = 380
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ------------LL 221
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R +
Sbjct: 61 TSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRGERRAEAEKQLQQAQEAGAE 120
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K + +T+Q + E + LL+L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EEAEKFAKRLVKVTKQHNEECKRLLRLMGIPYLEAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|255732117|ref|XP_002550982.1| hypothetical protein CTRG_05280 [Candida tropicalis MYA-3404]
gi|240131268|gb|EER30828.1| hypothetical protein CTRG_05280 [Candida tropicalis MYA-3404]
Length = 678
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 149 LISDVSIWLHQ-LTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK 207
L D WLH+ + +L G ++ + ++I L +F I P FVFDG K+
Sbjct: 27 LAIDTYGWLHRAIVSCAEELCLGKPTRNYITYVVNKINMLRYFGITPYFVFDGAALPTKQ 86
Query: 208 QTISTLEKDRDQL--LLER----------GKQTRLASTITEQMSREAQELLQLFGVPFIV 255
+T +K R + L E+ GKQ A+ +T QM++ L + G+ +IV
Sbjct: 87 ETNKERQKRRQEAKELAEKYLAANNPQLAGKQFMKAAYVTSQMAKSIMSELDIMGIKYIV 146
Query: 256 APGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKS 300
AP EA+ Q LE G++++DSD+ +FG + + D S
Sbjct: 147 APYEADPQMVYLEKIGLVDGILSEDSDLLIFGCKKLITKLKDDGS 191
>gi|346979176|gb|EGY22628.1| hypothetical protein VDAG_04066 [Verticillium dahliae VdLs.17]
Length = 828
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 25/144 (17%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D++IW Q T GG+ N + L++R+ +L+ ++PVFVFDG
Sbjct: 38 DIAIWQFQ----TQAAKGGT--NPAIRTLFYRLVRLVGLPVQPVFVFDGP---------- 81
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
++ + +R K++ I M A+ L++LFG P APGEAEA+CA L+
Sbjct: 82 ------NKPIFKRNKRSGRGDGIASAM---AKRLIRLFGFPIHQAPGEAEAECALLQQEG 132
Query: 272 HTQGVITDDSDIWLFGARTVYKNF 295
V+++D D +FG ++N+
Sbjct: 133 LVDAVLSEDVDTIMFGCSRTFRNW 156
>gi|444513068|gb|ELV10260.1| Flap endonuclease 1 [Tupaia chinensis]
Length = 380
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K ++ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 121 EEVEKFSKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG+ + ++
Sbjct: 181 DCLTFGSPVLMRHL 194
>gi|432911452|ref|XP_004078686.1| PREDICTED: probable flap endonuclease 1 homolog [Oryzias latipes]
Length = 343
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGKQTRLAST 233
++ L GL+ R L IKPVFVFDG P K + LEK + R +T +AS+
Sbjct: 49 SSPLRGLFFRTLTFLEHDIKPVFVFDGKPPVEK---LPLLEKRAEAAGWSRPLRTGIASS 105
Query: 234 ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYK 293
T R+ E+L+ GVP + APG+AE CASL V ++D D FGA + +
Sbjct: 106 QT----RDCLEVLKHLGVPVVQAPGDAEGLCASLVREGRAHAVASEDMDTLPFGANVLIR 161
Query: 294 NFFDKK-SHVLRYTAPDI 310
KK S ++ Y+ P +
Sbjct: 162 QLNAKKDSEIVEYSLPKL 179
>gi|402468038|gb|EJW03248.1| hypothetical protein EDEG_00228 [Edhazardia aedis USNM 41457]
Length = 362
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 21/180 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNA-----HLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q G ++ HLIG ++R +++ IKP+FVFDG P+LK
Sbjct: 34 DASLSLYQFLIAVRSDGAGLTTDSGDTTSHLIGTFYRTIRIVTSGIKPLFVFDGLPPELK 93
Query: 207 -KQTISTLEKDRD------QLLLERGKQTRLAS------TITEQMSREAQELLQLFGVPF 253
+ ++ RD ++ LE G + ++ +T++ + ++LL L VP+
Sbjct: 94 LSHELEKRKEKRDAAAKEYEMALETGDKEQIEKFDKRKVKVTKKHVDDCKKLLDLMKVPY 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFF---DKKSHVLRYTAPDI 310
+VAP EAEA A L + V T+D D FGA + +N +KK ++ Y +I
Sbjct: 154 VVAPSEAEAYAAYLCIKGVVDAVATEDMDALTFGAPILLRNLNAAENKKLPIVEYNLKEI 213
>gi|330914144|ref|XP_003296510.1| hypothetical protein PTT_06636 [Pyrenophora teres f. teres 0-1]
gi|311331271|gb|EFQ95374.1| hypothetical protein PTT_06636 [Pyrenophora teres f. teres 0-1]
Length = 934
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 31/162 (19%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIWL Q+ GG+ N L Y+R+ +L+ I P+FVFDG
Sbjct: 38 DTSIWLFQIQASK----GGT--NPALRTFYYRLLRLIALAIHPIFVFDGP---------- 81
Query: 212 TLEKDRDQLLLERGKQTRL-ASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
++ +R K+T +++ E + A++LL+ FG P +APGEAEA+CA L+
Sbjct: 82 ------NKPPFKRNKRTGPNVASVPEFL---AKQLLKQFGYPIHLAPGEAEAECALLQRE 132
Query: 271 NHTQGVITDDSDIWLFGARTVYKNFFDKKS-----HVLRYTA 307
V+++D D +FG+ +N+ +KS HV Y A
Sbjct: 133 GIVDAVLSEDVDTLMFGSGITIRNWSPEKSGNTPTHVNVYDA 174
>gi|308499054|ref|XP_003111713.1| hypothetical protein CRE_03137 [Caenorhabditis remanei]
gi|308239622|gb|EFO83574.1| hypothetical protein CRE_03137 [Caenorhabditis remanei]
Length = 447
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D IWL++ KG + PN++LI + RI +L KI P+ VFD +
Sbjct: 27 LAIDGHIWLYESLKGC-ETHHQQTPNSYLITFFTRIQRLRELKIIPIVVFD----SISSS 81
Query: 209 TISTLEKDRDQLLLERGKQ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEA 262
+ + D+D+ + + + T LA + + S LL FGV I+APG+ EA
Sbjct: 82 SAAHEAADQDEFVPRKRRSFGDSPFTNLADHVIKTNS-----LLSHFGVKVIIAPGDGEA 136
Query: 263 QCASLELGNHTQGVITDDSDIWLFGARTVYK 293
QCA LE G IT D D +LFG + +Y+
Sbjct: 137 QCARLEELGVVSGCITTDFDYFLFGGKNLYR 167
>gi|149237665|ref|XP_001524709.1| hypothetical protein LELG_03741 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451306|gb|EDK45562.1| hypothetical protein LELG_03741 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 800
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 149 LISDVSIWLHQ-LTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK 207
L D WLH+ + DL G ++ + ++I L F+I P FVFDG + K
Sbjct: 27 LAIDTYGWLHRAVVSCAEDLCLGRPTRRYVTYVRNKIAMLQDFQITPYFVFDGASLRTKA 86
Query: 208 QTISTLEKDRDQLL--------LER----GKQTRLASTITEQMSREAQELLQLFGVPFIV 255
QT K R + L L R GKQ A+ +T QM++ L L + ++V
Sbjct: 87 QTNDERRKSRKEALALAQQYAKLGRSDLAGKQYMKAACVTSQMAKLIMCELDLLKIKYVV 146
Query: 256 APGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHV 302
AP EA+ Q LE G++++DSD+ +FG R + D + V
Sbjct: 147 APYEADPQMVYLEKIGLVDGILSEDSDLLIFGCRKLITKLKDDSTCV 193
>gi|389740276|gb|EIM81467.1| PIN domain-like protein [Stereum hirsutum FP-91666 SS1]
Length = 528
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 26/141 (18%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI-------------------STLE 214
+HL+G ++R +++ IKP +VFDG P LK + +
Sbjct: 62 TSHLMGFFYRTIRIVENGIKPAYVFDGKPPDLKAGVLAKRFEKREEAKEEGEEAKETGTA 121
Query: 215 KDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQ 274
+D D+ +R +T + + E Q LL+L G+P +VAP EAEAQCA L G
Sbjct: 122 EDVDRF-------SRRTVRVTREHNAECQRLLRLMGIPVVVAPSEAEAQCAELARGGKVY 174
Query: 275 GVITDDSDIWLFGARTVYKNF 295
++D D F A T++++
Sbjct: 175 AAGSEDMDTLTFSAPTLFRHL 195
>gi|254166886|ref|ZP_04873740.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
gi|289596167|ref|YP_003482863.1| flap structure-specific endonuclease [Aciduliprofundum boonei T469]
gi|197624496|gb|EDY37057.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
gi|289533954|gb|ADD08301.1| flap structure-specific endonuclease [Aciduliprofundum boonei T469]
Length = 339
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 67/134 (50%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------------L 221
+HL GL +R L IKPV+VFDG P+LK +TI K R + L
Sbjct: 55 TSHLSGLLYRTANFLAEGIKPVYVFDGRPPELKMRTIGERIKIRMEAKEAWEKALKEGNL 114
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E + + A+ +T+ M EA++LL G+P++ AP E EAQ A + T + D
Sbjct: 115 EEARSKAQQATFLTKDMVDEAKKLLDYMGIPWVQAPSEGEAQAAYMAKKGDTYASASQDF 174
Query: 282 DIWLFGARTVYKNF 295
D LFGA + +N
Sbjct: 175 DSLLFGAPNLVRNL 188
>gi|343427426|emb|CBQ70953.1| probable DNA repair endonuclease rad2 [Sporisorium reilianum SRZ2]
Length = 374
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS-----------TLEKDRDQLLL 222
+HL+G ++R +++ + IKP++VFDG P LKK+ + E+ +D +
Sbjct: 62 TSHLLGFFYRTLRMIDYGIKPMYVFDGTPPDLKKELLQKRFGRREEAREQEEEQKDVADV 121
Query: 223 ERGKQ-TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E+ Q R T Q + E + LL+L G+P ++AP EAEAQCA L ++D
Sbjct: 122 EKMDQLARRQVRPTRQHNEEVRHLLKLMGIPCVIAPSEAEAQCAELARAGKVYAAGSEDM 181
Query: 282 DIWLFGARTVYKNF 295
D FG + K+
Sbjct: 182 DTLTFGTPILLKHL 195
>gi|312082398|ref|XP_003143428.1| flap endonuclease-1 [Loa loa]
gi|307761410|gb|EFO20644.1| flap endonuclease-1 [Loa loa]
Length = 345
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 17/154 (11%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ L+Q G+ +HL+G+++R +++ IKPV+VFDG PQ+K
Sbjct: 34 DASMCLYQFLIAVRQDGSQLQTESGETTSHLLGMFYRTIRMIDNGIKPVYVFDGKPPQMK 93
Query: 207 KQTISTLEKDRDQLLLERG------------KQTRLASTITEQMSREAQELLQLFGVPFI 254
+ + R + +R K R +T++ + EA+ L+ L G+P +
Sbjct: 94 TSELEKRIERRAEAEKQRSDAVELGDEASVNKFARRLVKVTKEQNEEAKRLVTLMGIPVL 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
AP EAEAQCA+L +++D D FG+
Sbjct: 154 DAPCEAEAQCAALARAGKVFATVSEDMDALTFGS 187
>gi|258573689|ref|XP_002541026.1| DNA-repair protein rad2 [Uncinocarpus reesii 1704]
gi|237901292|gb|EEP75693.1| DNA-repair protein rad2 [Uncinocarpus reesii 1704]
Length = 413
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 12/150 (8%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L S++S + + G + +HL+GL++R +++ IKP++VFDG P+LK
Sbjct: 54 LESNISFLIAVRSDGQQLMNESGETTSHLMGLFYRTLRMVDNGIKPLYVFDGAPPKLKSG 113
Query: 209 TIST--LEKDRDQLLLERGKQT----------RLASTITEQMSREAQELLQLFGVPFIVA 256
++ K E K+T R +T + + E ++LL+L G+P+I A
Sbjct: 114 ELAKRIARKQEAAEQHEEAKETGTTEDVEKFSRRTVRVTREHNEECKKLLKLMGIPYINA 173
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLF 286
P EAEAQCA L ++D D F
Sbjct: 174 PTEAEAQCAVLARAGKVYAAASEDMDTLCF 203
>gi|348500556|ref|XP_003437839.1| PREDICTED: probable flap endonuclease 1 homolog [Oreochromis
niloticus]
Length = 348
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SI ++Q T L+ L GL+ R L IKPVFVFDG P KK +
Sbjct: 34 DTSIVVNQFRAATPLLS-------PLTGLFFRTLTFLEHGIKPVFVFDGKPPGEKK---A 83
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
LEK T AS+ T +E +LL+ GVP I APG+AEA CA L
Sbjct: 84 VLEKRAQTAGRNYSNWTGTASSQT----KECLQLLKCLGVPVIQAPGDAEALCAQLVREG 139
Query: 272 HTQGVITDDSDIWLFGARTVYKNFFDKK-SHVLRYTAPDI 310
V ++D D FGA + + KK S V+ Y+ P +
Sbjct: 140 TVHAVASEDMDTLPFGANILIRQLNAKKDSEVIEYSLPKL 179
>gi|440797493|gb|ELR18579.1| XPG Iregion domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 434
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 27/162 (16%)
Query: 140 IVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFD 199
+ + L+ + D IWL D AG + +HL+G++ R +L+ + IKPV+VFD
Sbjct: 1 MALYAFLISIRPDTGIWLT-------DEAGET--TSHLMGIWSRTLRLIAYGIKPVYVFD 51
Query: 200 GGVPQLKKQTI---STLEKDRDQLLLERGKQTRLAST------------ITEQMSREAQE 244
G P +K + S +K+ +Q L E T L T +T + + E ++
Sbjct: 52 GRPPVMKGTELKKRSAKKKEAEQGLEE---ATELGDTETMRKLEKRTVHVTPKHNEECKK 108
Query: 245 LLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
LL+L G+P + AP EAEAQCA L ++D D F
Sbjct: 109 LLRLMGIPVVEAPTEAEAQCAELCRAGKVFATGSEDMDSLTF 150
>gi|321473340|gb|EFX84308.1| hypothetical protein DAPPUDRAFT_47502 [Daphnia pulex]
Length = 374
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 152 DVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
D S+ ++Q ++G + +HL+G+++R +++ IKPV+VFDG P +K
Sbjct: 34 DASMSIYQFLIAVRSEGAMLTSADGETTSHLMGIFYRTIRMVDNGIKPVYVFDGKPPDMK 93
Query: 207 KQTISTLEKDRD----QLLL--------ERGKQTRLASTITEQMSREAQELLQLFGVPFI 254
++ + R+ QL+L E K + + + + E ++LL L G+P++
Sbjct: 94 GGELTKRAEKREEASKQLVLATDAGDAVEMEKMNKRLVKVNKGHTDECKQLLTLMGIPYV 153
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYK 293
AP EAEAQCA+L T+D D FG+ + +
Sbjct: 154 EAPCEAEAQCAALVKAGKVYATATEDMDSLTFGSNVLLR 192
>gi|407922590|gb|EKG15687.1| DNA repair protein [Macrophomina phaseolina MS6]
Length = 691
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 26/145 (17%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIWL Q+ GG+ N L Y+R+ +L+ I P+FVFDG
Sbjct: 38 DTSIWLFQI----QSSKGGT--NPALRTFYYRLLRLISLSIHPLFVFDGP---------- 81
Query: 212 TLEKDRDQLLLERGKQTRL-ASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
++ +R K+T ++I E + A++LL+ FG PF +APGEAEA+CA L+
Sbjct: 82 ------NKPPFKRNKRTGPNVASIPEFL---AKQLLKQFGFPFHIAPGEAEAECALLQRE 132
Query: 271 NHTQGVITDDSDIWLFGARTVYKNF 295
V+++D D +FG+R +N+
Sbjct: 133 GIVDVVLSEDVDTLMFGSRITLRNW 157
>gi|134106579|ref|XP_778300.1| hypothetical protein CNBA3000 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50261003|gb|EAL23653.1| hypothetical protein CNBA3000 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1323
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIWL+Q D G + NAH++G RI KLLF IKPVFVFDGG P LK+
Sbjct: 91 LAIDSSIWLYQFQATMRDKDGRVLVNAHVLGFLRRINKLLFHGIKPVFVFDGGAPALKRS 150
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQL 248
TI+ E+ R + QM REA + Q+
Sbjct: 151 TIA--ERKRKKTGAAANHAKVAEKLFAAQMRREAVKAAQV 188
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%)
Query: 229 RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
R + IT+ M + Q LL+ FG+P+I AP EAEAQCA L G+ITDDSD++LFG
Sbjct: 938 RDSDEITQSMIAQIQTLLRHFGIPYITAPMEAEAQCAKLAQLGLVDGIITDDSDVFLFGG 997
Query: 289 RTVYKNFFDKKSHV 302
+KN F+ +
Sbjct: 998 VQCFKNIFNDAKYA 1011
>gi|317376211|sp|B8MNF2.2|FEN1_TALSN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 144 KLLVDL-ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGV 202
K+ +D +S S + + G ++ +HL+G+++R +++ IKP++VFDG
Sbjct: 30 KVAIDASMSIYSFLIAVRSDGQQLMSDAGETTSHLMGMFYRTLRIVDNGIKPLYVFDGAP 89
Query: 203 PQLKKQTIS--TLEKDRDQLLLERGKQT----------RLASTITEQMSREAQELLQLFG 250
P+LK ++ + K E K+T R +T + + E ++LL+L G
Sbjct: 90 PKLKGGELAKRSARKREAHEAHEEAKETGTAEDMEKFSRRTVRVTREHNEECKKLLKLMG 149
Query: 251 VPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
VP+I AP EAEAQCA L ++D D F A
Sbjct: 150 VPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEA 187
>gi|58258651|ref|XP_566738.1| single-stranded DNA specific endodeoxyribonuclease [Cryptococcus
neoformans var. neoformans JEC21]
gi|57222875|gb|AAW40919.1| single-stranded DNA specific endodeoxyribonuclease, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 1323
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIWL+Q D G + NAH++G RI KLLF IKPVFVFDGG P LK+
Sbjct: 91 LAIDSSIWLYQFQATMRDKDGRVLVNAHVLGFLRRINKLLFHGIKPVFVFDGGAPALKRS 150
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQL 248
TI+ E+ R + QM REA + Q+
Sbjct: 151 TIA--ERKRKKTGAAANHAKVAEKLFAAQMRREAVKAAQV 188
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%)
Query: 229 RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
R + IT+ M + Q LL+ FG+P+I AP EAEAQCA L G+ITDDSD++LFG
Sbjct: 938 RDSDEITQSMIAQIQTLLRHFGIPYITAPMEAEAQCAKLAQLGLVDGIITDDSDVFLFGG 997
Query: 289 RTVYKNFFDKKSHV 302
+KN F+ +
Sbjct: 998 VQCFKNIFNDAKYA 1011
>gi|242813984|ref|XP_002486279.1| Flap endonuclease Rad27, putative [Talaromyces stipitatus ATCC
10500]
gi|218714618|gb|EED14041.1| Flap endonuclease Rad27, putative [Talaromyces stipitatus ATCC
10500]
Length = 399
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 144 KLLVDLISDVSIWLHQL-----TKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVF 198
K+ + I+ +S+ ++ + G ++ +HL+G+++R +++ IKP++VF
Sbjct: 30 KVAIVRINRISMSIYSFLIAVRSDGQQLMSDAGETTSHLMGMFYRTLRIVDNGIKPLYVF 89
Query: 199 DGGVPQLKKQTIS--TLEKDRDQLLLERGKQT----------RLASTITEQMSREAQELL 246
DG P+LK ++ + K E K+T R +T + + E ++LL
Sbjct: 90 DGAPPKLKGGELAKRSARKREAHEAHEEAKETGTAEDMEKFSRRTVRVTREHNEECKKLL 149
Query: 247 QLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
+L GVP+I AP EAEAQCA L ++D D F A
Sbjct: 150 KLMGVPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEA 191
>gi|347522663|ref|YP_004780233.1| flap structure-specific endonuclease [Pyrolobus fumarii 1A]
gi|343459545|gb|AEM37981.1| flap structure-specific endonuclease [Pyrolobus fumarii 1A]
Length = 350
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------LERG-- 225
+HL GL++R L+ IK V+VFDG P++K I +K + + +++G
Sbjct: 58 TSHLSGLFYRTINLIEHGIKVVYVFDGKPPEIKSIEIERRKKVKSEAAKKYEEAIKKGDL 117
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
+ ++AS +TE M +EA+ LL GVP++ AP + EAQ A + + D
Sbjct: 118 EAARRYAQMASRLTEDMVKEAKRLLDAMGVPWVQAPADGEAQAAYMARKGDVWAAASQDY 177
Query: 282 DIWLFGARTVYKNF 295
D LFGA + +N
Sbjct: 178 DALLFGAPRLVRNL 191
>gi|297816098|ref|XP_002875932.1| hypothetical protein ARALYDRAFT_485245 [Arabidopsis lyrata subsp.
lyrata]
gi|297321770|gb|EFH52191.1| hypothetical protein ARALYDRAFT_485245 [Arabidopsis lyrata subsp.
lyrata]
Length = 600
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+S W+ +L K +L GL+HR+ L+ + V DG +P +K T
Sbjct: 30 DLSCWMVELHKVNKSYCAAK-EKVYLRGLFHRLRALIALNCSIILVSDGAIPGIKVPTYR 88
Query: 212 TLEKDRDQLL---LERGKQTRLASTITEQMS---REAQELLQLFGVPFIVAPGEAEAQCA 265
K R ++ +E K+T L + + S +EA+ + G+ + EAEAQCA
Sbjct: 89 RRLKARFEVADDGVEPSKETSLKRNMGSEFSCIIKEAKVIASTLGILCLDGIEEAEAQCA 148
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVYKNF-FDKKSHVLRYTAPDIR 311
L + + DSDI+LFGA+TVY+ + +V+ Y DI+
Sbjct: 149 LLNSESLCDACFSSDSDIFLFGAKTVYREICLGEGGYVVCYEMDDIK 195
>gi|221222286|gb|ACM09804.1| Flap endonuclease 1-A [Salmo salar]
Length = 192
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 12/113 (10%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLL---ERGKQ 227
+HL+G+++R ++L IKPV+VFDG PQLK + + R ++LL E G+Q
Sbjct: 61 TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQEAGEQ 120
Query: 228 ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQ 274
++ +T+Q + E ++LL L GVP+I AP EAEA CA+L H Q
Sbjct: 121 ENIDKFSKRLVKVTQQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAPHCQ 173
>gi|321251586|ref|XP_003192115.1| single-stranded DNA specific endodeoxyribonuclease [Cryptococcus
gattii WM276]
gi|317458583|gb|ADV20328.1| Single-stranded DNA specific endodeoxyribonuclease, putative
[Cryptococcus gattii WM276]
Length = 1263
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIWL+Q D G + NAH++G RI KLLF IKPVFVFDGG P LK+
Sbjct: 27 LAIDSSIWLYQFQATMRDKDGRVLVNAHVLGFLRRINKLLFHGIKPVFVFDGGAPALKRS 86
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQL 248
TI+ E+ R + QM REA + Q+
Sbjct: 87 TIA--ERKRKKTGAAANHAKVAEKLFAAQMRREAVKAAQV 124
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 229 RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
R + IT M + Q LL+ FG+P+I AP EAEAQCA L G+ITDDSD++LFG
Sbjct: 878 RDSDEITASMVAQIQTLLRHFGIPYITAPMEAEAQCAKLAQLGLVDGIITDDSDVFLFGG 937
Query: 289 RTVYKNFFDKKSHVLRYTAPDI 310
+KN F+ + + D+
Sbjct: 938 VQCFKNIFNDAKYAECFLLADV 959
>gi|320582300|gb|EFW96517.1| 5' to 3' exonuclease, 5' flap endonuclease [Ogataea parapolymorpha
DL-1]
Length = 374
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 18/153 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q G + N +HL+G ++R +++ IKP +VFDG P L
Sbjct: 34 DASMCLYQFLIAVRQQDGNQLTNEAGGTTSHLMGFFYRTIRMVGNGIKPCYVFDGKPPVL 93
Query: 206 KKQTISTLEKDRDQL------LLERGKQTRLAS------TITEQMSREAQELLQLFGVPF 253
K + K R++ L E G L +T + + +AQ LL+L G+P+
Sbjct: 94 KGGELEKRLKRREEAEQKALELKETGTVEELQRFEKRQVKVTREQNEQAQHLLRLMGIPY 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
++AP EAEAQCA L ++D D +
Sbjct: 154 VIAPCEAEAQCAELARKGKVYAAASEDMDTLCY 186
>gi|405117687|gb|AFR92462.1| single-stranded DNA specific endodeoxyribonuclease [Cryptococcus
neoformans var. grubii H99]
Length = 1222
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIWL+Q D G + NAH++G RI KLLF IKPVFVFDGG P LK+
Sbjct: 13 LAIDSSIWLYQFQATMRDKDGRVLVNAHVLGFLRRINKLLFHGIKPVFVFDGGAPALKRS 72
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQL 248
TI+ E+ R + QM REA + Q+
Sbjct: 73 TIA--ERKRKKTGAAANHAKVAEKLFAAQMRREAVKAAQV 110
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%)
Query: 243 QELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHV 302
+ LL+ FG+P+I AP EAEAQCA L G+ITDDSD++LFG +KN F+ +V
Sbjct: 835 ETLLRHFGIPYITAPMEAEAQCAKLAQLGLVDGIITDDSDVFLFGGGQCFKNIFNDAKYV 894
>gi|403223884|dbj|BAM42014.1| uncharacterized protein TOT_040000390 [Theileria orientalis strain
Shintoku]
Length = 784
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 241 EAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKS 300
+ Q LL+LFGVP+++AP EAE+QCA + VI+DDSD +FGAR + KNF++
Sbjct: 480 DTQALLELFGVPYLIAPSEAESQCAYMNKKGDCYAVISDDSDALVFGARCLLKNFYNDNV 539
Query: 301 HVLRYTAPDIR 311
L YTA IR
Sbjct: 540 FEL-YTAERIR 549
>gi|328773336|gb|EGF83373.1| hypothetical protein BATDEDRAFT_22008 [Batrachochytrium
dendrobatidis JAM81]
Length = 388
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ ++Q G + N +HL+G+ +R +++ IKP +VFDG P L
Sbjct: 34 DASMSIYQFLIAVRQSDGQQLTNEAGETTSHLMGMLYRTIRMVENGIKPAYVFDGKPPTL 93
Query: 206 KKQTISTLEKDRDQ------LLLERG------KQTRLASTITEQMSREAQELLQLFGVPF 253
K + + R + LE G + +R +T++ ++E + LL+L G+P
Sbjct: 94 KSGELQKRGERRAEAQKEADTALETGDTENFNRFSRRTVKVTKEQNQECRRLLKLMGIPI 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
+ AP EAEAQCA+L ++D D FGA
Sbjct: 154 VEAPCEAEAQCAALAKAGKVYAAGSEDMDTLTFGA 188
>gi|193084327|gb|ACF09984.1| XPG I flap structure-specific endonuclease [uncultured marine
crenarchaeote SAT1000-49-D2]
Length = 341
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 71/150 (47%), Gaps = 14/150 (9%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS--TLEKDRDQLLLERGKQT---- 228
+HL GL HR L IKPV+VFDG P LK I L K + E+ K +
Sbjct: 56 SHLTGLLHRNVNFLSIGIKPVYVFDGKPPSLKTAEIQRRKLGKKEATIKYEKAKASGDFE 115
Query: 229 ------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
+ +++ + M +++ LL LFG+P+I A + EA A + V + D D
Sbjct: 116 SARKYAQQTTSMQDTMVEDSKHLLDLFGIPYIQANADGEATAAHMNKTGKAYAVASQDYD 175
Query: 283 IWLFGARTVYKNFFDKKSHVL--RYTAPDI 310
LFGA+ + +NF + L R T DI
Sbjct: 176 SILFGAKKLVRNFTNSGRRKLPNRNTYVDI 205
>gi|397601505|gb|EJK57927.1| hypothetical protein THAOC_21987, partial [Thalassiosira oceanica]
Length = 268
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 248 LFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTA 307
L G+P++ +P EAEAQCA+LE GV+T+DSDI++FG + VYKNFFD++ V Y A
Sbjct: 1 LCGIPWVESPSEAEAQCAALERLGLVDGVVTEDSDIFVFGGQKVYKNFFDEQKFVEAYYA 60
Query: 308 PDI 310
DI
Sbjct: 61 RDI 63
>gi|71017559|ref|XP_759010.1| hypothetical protein UM02863.1 [Ustilago maydis 521]
gi|46098732|gb|EAK83965.1| hypothetical protein UM02863.1 [Ustilago maydis 521]
Length = 864
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 73/155 (47%), Gaps = 25/155 (16%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D S+WL H L N HL L++R+ KLL + PVFVFDG K+ T
Sbjct: 42 DASLWLF------HALQSSGGANPHLRLLFYRLAKLLSLPVLPVFVFDGP----KRPT-- 89
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
+RGK L S + + L++ FG + APGEAEA+ A L N
Sbjct: 90 ----------WKRGK---LVSGRQQVIEEPFSYLIEAFGYQWHRAPGEAEAELAYLNQVN 136
Query: 272 HTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYT 306
V+TDDSD LFGA V +N+ S + ++
Sbjct: 137 LIDAVLTDDSDALLFGAHVVIRNWGKNLSGTMAFS 171
>gi|388854784|emb|CCF51677.1| probable DNA repair endonuclease rad2 [Ustilago hordei]
Length = 374
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS-----------TLEKDRDQLLL 222
+HL+G ++R +++ + IKP++VFDG P LKK+ + E+ +D +
Sbjct: 62 TSHLLGFFYRTLRMIDYGIKPMYVFDGTPPDLKKELLQKRFGRREEAREQQEEQKDVADV 121
Query: 223 ERGKQ-TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E+ Q R T Q + E + LL+L G+P ++AP EAEAQCA L ++D
Sbjct: 122 EKMDQLARRQVRPTRQHNEEVRHLLKLMGIPCVIAPSEAEAQCAELARAGKVYAAGSEDM 181
Query: 282 DIWLFGARTVYKNF 295
D FG + K+
Sbjct: 182 DTLTFGTPILLKHL 195
>gi|213404598|ref|XP_002173071.1| exonuclease I Exo1 [Schizosaccharomyces japonicus yFS275]
gi|212001118|gb|EEB06778.1| exonuclease I Exo1 [Schizosaccharomyces japonicus yFS275]
Length = 566
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 152 DVSIWLHQ-LTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
D +WLH+ + +LA + ++ HRI L ++ +KP VFDGG P K
Sbjct: 30 DAYVWLHKGVFACAKELAFNIETDKYIQYAMHRISMLTYYGVKPFVVFDGG-PLPSKLGT 88
Query: 211 STLEKDRDQLLLERGKQ-----------TRLASTI--TEQMSREAQELLQLFGVPFIVAP 257
+ R + LE GK+ L+ +I T +M+ L+ +PF+VAP
Sbjct: 89 EEKRRARRKEALELGKKLWNEGKRSQAMMHLSRSIDVTPEMANRFAMTLRQNNIPFVVAP 148
Query: 258 GEAEAQCASLELGNHTQGVITDDSDIWLFGARTV 291
EA+ Q LE G+IT+DSD+ +FGARTV
Sbjct: 149 YEADPQLVYLEKTGFIDGIITEDSDMLIFGARTV 182
>gi|149239008|ref|XP_001525380.1| structure-specific endonuclease RAD27 [Lodderomyces elongisporus
NRRL YB-4239]
gi|317374907|sp|A5E121.1|FEN1_LODEL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|146450873|gb|EDK45129.1| structure-specific endonuclease RAD27 [Lodderomyces elongisporus
NRRL YB-4239]
Length = 384
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 18/153 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q G + N +HL G+++R +++ IKPV+VFDG P L
Sbjct: 34 DASMCLYQFLIAVRQSDGQQLTNDEGETTSHLSGIFYRTIRMVENNIKPVYVFDGKPPVL 93
Query: 206 KKQTIST--LEKDRDQLLLERGKQTRLASTITEQMSR----------EAQELLQLFGVPF 253
K + L+++ Q ++ K S +T+ R EA++LL+L G+P+
Sbjct: 94 KGGELEKRLLKREEAQKQIDNLKDDASVSDMTKYQKRLVRVSRDQNDEAKKLLELMGIPY 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
+ AP EAEAQCA L G ++D D +
Sbjct: 154 VNAPCEAEAQCAELARGGKVFAAASEDMDTLCY 186
>gi|268571629|ref|XP_002641105.1| Hypothetical protein CBG17486 [Caenorhabditis briggsae]
Length = 437
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D IWL++ KG + PN++LI + RI +L KI P+ VFD
Sbjct: 27 LAIDGHIWLYESLKGC-ETHHQQTPNSYLITFFTRIQRLRELKITPIVVFDS------IS 79
Query: 209 TISTLEKDRDQLLLERGKQTRLASTITEQMS---REAQELLQLFGVPFIVAPGEAEAQCA 265
T S + DQ K+ ++ ++ + LL GV I++PG+ EAQCA
Sbjct: 80 TSSPAHEGADQEEFVPRKRRSFGDSLFTNLADPVYKTNMLLSQMGVKVIISPGDGEAQCA 139
Query: 266 SLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHV 302
LE T G IT D D +LFG + +Y+ F +V
Sbjct: 140 RLEELEVTSGCITTDFDYFLFGGKNLYRFDFTASGNV 176
>gi|452838210|gb|EME40151.1| hypothetical protein DOTSEDRAFT_158847, partial [Dothistroma
septosporum NZE10]
Length = 687
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 152 DVSIWLHQLTKGTH-DLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
D WLH+ T +LA G H+ HR+ L+ F +KP VFDG K T
Sbjct: 30 DAYGWLHRGTVSCAIELAEGKPTRKHIDFALHRVRMLIHFGVKPYIVFDGDYLPSKAHTE 89
Query: 211 STLEKDRDQ--------LLLERGKQTRL----ASTITEQMSREAQELLQLFGVPFIVAPG 258
S R + L + R Q L A +T M+RE E L+ VP++VAP
Sbjct: 90 SERAARRKESKRMGLELLRMGRPSQAHLELQKAVDVTPVMARELIEELKRLEVPYVVAPY 149
Query: 259 EAEAQCASLELGNHTQGVITDDSDIWLFGARTV 291
EA++Q A LE GVI++DSD+ +FG + +
Sbjct: 150 EADSQLAYLEKQGMIDGVISEDSDLLVFGVKCL 182
>gi|170041796|ref|XP_001848636.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167865395|gb|EDS28778.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 724
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 66/144 (45%), Gaps = 21/144 (14%)
Query: 173 PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI--------------STLEKDRD 218
P +L L+ R C LL I PVFV +G P LK I + D++
Sbjct: 48 PRFYLRNLFFRTCYLLTTGIVPVFVLEGAAPPLKYGVIIQRNQIQFRGARPKKAADCDKE 107
Query: 219 QLLLERGKQTRLASTITEQ-------MSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
++ KQ EQ + ++ +ELL G+ + APGEAEA CA L N
Sbjct: 108 ATGGDKRKQDEPGKRAPEQKRNRFHHVLKQCEELLSSMGLVCVQAPGEAEALCAHLNREN 167
Query: 272 HTQGVITDDSDIWLFGARTVYKNF 295
G+I+ DSD + +G VY+NF
Sbjct: 168 LVHGIISQDSDCFAYGGVRVYRNF 191
>gi|410670767|ref|YP_006923138.1| flap endonuclease-1 [Methanolobus psychrophilus R15]
gi|409169895|gb|AFV23770.1| flap endonuclease-1 [Methanolobus psychrophilus R15]
Length = 338
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD--QLLLERGKQTRLA- 231
+HL GL +R+ L+ I+PVFVFDG PQ+K TI + R+ Q+ E+ ++ LA
Sbjct: 56 SHLSGLLYRMSSLMEAGIRPVFVFDGKPPQMKSPTIEKRVQARENAQMKWEQAQEEGLAE 115
Query: 232 ---------STITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
S + + ++++LL G+PF+ AP E EAQ A + + + D D
Sbjct: 116 EAYKYAQASSRVDATIVEDSRKLLNAMGIPFLDAPSEGEAQAAYMVIKRDADYAGSQDYD 175
Query: 283 IWLFGARTVYKNF 295
LFGA V +N
Sbjct: 176 SLLFGAPRVVRNL 188
>gi|347968324|ref|XP_312255.5| AGAP002669-PA [Anopheles gambiae str. PEST]
gi|333468059|gb|EAA08023.5| AGAP002669-PA [Anopheles gambiae str. PEST]
Length = 733
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 173 PNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEK------------DRDQL 220
P +L L+ R C LL I PVFV +G P LK I + + D+
Sbjct: 35 PRFYLRNLFFRTCYLLQTGITPVFVLEGTAPPLKYGVIVKRNQMQFRGARPKKIANCDKA 94
Query: 221 LLERGKQTRLASTITEQ-------MSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHT 273
+ + T + TEQ + ++ +ELL G+ + APGEAEA CA L N
Sbjct: 95 TVSSTQTTEKPAKPTEQKRNRFHHVLKQCEELLSAMGLVCVQAPGEAEALCAYLNRDNLI 154
Query: 274 QGVITDDSDIWLFGARTVYKNF 295
GVI+ DSD + +GA V++NF
Sbjct: 155 YGVISQDSDCFAYGAVRVFRNF 176
>gi|67589751|ref|XP_665434.1| RAD2 [Cryptosporidium hominis TU502]
gi|54656123|gb|EAL35205.1| RAD2 [Cryptosporidium hominis]
Length = 1158
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 213 LEKDRDQLLLERGKQ-TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
LEK++++L LE K L S IT++M + LL+ G+P+I +PGEAEAQ + L N
Sbjct: 864 LEKEQEELSLEFTKHDIILNSEITKEMQYQICLLLKALGIPWIDSPGEAEAQASILTQLN 923
Query: 272 HTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
GV++DDSD +FGA+ +++NFF S V Y ++ Y
Sbjct: 924 ICHGVLSDDSDCLIFGAKKIFRNFFSGNS-VEMYDLNQVKKYL 965
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIWL Q G D G AHL+G + R+CKLL++ I PV VFDG P +KK+
Sbjct: 27 LAIDASIWLKQFLMGLKDKEGKIPQGAHLLGFFKRLCKLLYYGILPVIVFDGTPPDIKKR 86
Query: 209 TIS--TLEKDRDQLLLERGKQTRLASTI 234
T+ ++++ ++ + R L +TI
Sbjct: 87 TLELRRMQREMSEINMRRVANKLLLNTI 114
>gi|147920854|ref|YP_685339.1| flap endonuclease-1 [Methanocella arvoryzae MRE50]
gi|121690538|sp|Q0W6I0.1|FEN_UNCMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|110620735|emb|CAJ36013.1| flap structure-specific endonuclease [Methanocella arvoryzae MRE50]
Length = 340
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD-----------QLLL 222
+HL G+ +R+ L+ +KPVFVFDG P K +TI + R+
Sbjct: 55 TSHLSGIIYRVTNLVEEGMKPVFVFDGKPPSFKAETIKARAEVREAARQMYEAAKAAGSA 114
Query: 223 ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
E K + +++I Q+ +A+ LL G+PFIVAP E EAQ A + V + D D
Sbjct: 115 EAYKYAQASTSINRQIVDDAKVLLGYMGIPFIVAPSEGEAQAAYMVSRGAADYVGSQDYD 174
Query: 283 IWLFGARTVYKNF 295
LFGA V +N
Sbjct: 175 SLLFGAPRVVRNI 187
>gi|358367996|dbj|GAA84614.1| Rad2-like endonuclease [Aspergillus kawachii IFO 4308]
Length = 875
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 22/149 (14%)
Query: 147 VDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
+ + D+SIWL Q+ G GG N L L++R+ K+L I P+FV+DG
Sbjct: 33 IRIAVDISIWLFQVQAGR----GGR--NPELRTLFYRLLKILALPIHPLFVYDG------ 80
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+++ +RGK S + + R ++ L+ LF P APGEAEA+CA
Sbjct: 81 ----------KNKPPFKRGKAVSSRSYGSAPIIRLSKILVDLFKFPRHEAPGEAEAECAR 130
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNF 295
L+ V+T+D D +FG+ F
Sbjct: 131 LQRAGVVDAVMTNDVDALMFGSTFTVMGF 159
>gi|170102406|ref|XP_001882419.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642791|gb|EDR07046.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 475
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 28/175 (16%)
Query: 146 LVDLISDVSIWLHQLTKGTHDLAG-----GSVPNAHLIGLYHRICKLLFFKIKPVFVFDG 200
+V + DVSIW+ Q H + G G P +I + RIC LL I+P+F+FDG
Sbjct: 34 MVCVGVDVSIWICQAQAVVHSIRGPGTREGENPALRII--FFRICHLLARCIEPIFIFDG 91
Query: 201 GVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFI-VAPGE 259
R + L +RG + S M + + L+ FG PF VAPGE
Sbjct: 92 ----------------RSRPLFKRGMNVK--SGKPHWMEQYIEGFLEDFGCPFYHVAPGE 133
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGARTVYK--NFFDKKSHVLRYTAPDIRY 312
AEA+ A L + VIT D D +LF ++ K N V+ Y+A DI +
Sbjct: 134 AEAELAQLTAQGLIEAVITTDFDFFLFRGTSLIKPPNVKADGDEVICYSADDIEH 188
>gi|156042752|ref|XP_001587933.1| hypothetical protein SS1G_11175 [Sclerotinia sclerotiorum 1980]
gi|154695560|gb|EDN95298.1| hypothetical protein SS1G_11175 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 387
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 12/106 (11%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQTRLA 231
+HL+G+++R +++ IKPV+VFDG P+LK ++ + + LE K+T A
Sbjct: 73 TSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFQRKATATEGLEEAKETGTA 132
Query: 232 STI----------TEQMSREAQELLQLFGVPFIVAPGEAEAQCASL 267
I T + + E Q+LL+L G+PFI+AP EAEAQCA L
Sbjct: 133 EDIEKFSRRTVRVTREHNAECQKLLKLMGIPFIIAPTEAEAQCAVL 178
>gi|401424227|ref|XP_003876599.1| putative flap endonuclease-1 (FEN-1) [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492842|emb|CBZ28120.1| putative flap endonuclease-1 (FEN-1) [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 395
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 25/167 (14%)
Query: 152 DVSIWLHQLT---KGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGV 202
D S+ ++Q KG D G + N +HL GL+ R +++ IKP++VFDG
Sbjct: 34 DASMSIYQFIIAMKGFQDGQGLELTNEKGDVTSHLNGLFARTLRMIDEGIKPIYVFDGKP 93
Query: 203 PQLK-------KQTISTLEKD-------RDQLLLERGKQTRLASTITEQMSREAQELLQL 248
P+LK +Q + EK+ D ++E K ++ ++ + E+++LL+L
Sbjct: 94 PKLKADELEARRQKAAEAEKEFEKAKDAGDDEMME--KMSKRTVRVSREQIDESKKLLRL 151
Query: 249 FGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
G+P I AP EAEAQCA L V T+D D FG+ + ++
Sbjct: 152 MGIPVIQAPSEAEAQCAELVKKGKAWAVGTEDMDALTFGSTIMLRHL 198
>gi|302796239|ref|XP_002979882.1| hypothetical protein SELMODRAFT_111465 [Selaginella moellendorffii]
gi|302813529|ref|XP_002988450.1| hypothetical protein SELMODRAFT_128023 [Selaginella moellendorffii]
gi|300143852|gb|EFJ10540.1| hypothetical protein SELMODRAFT_128023 [Selaginella moellendorffii]
gi|300152642|gb|EFJ19284.1| hypothetical protein SELMODRAFT_111465 [Selaginella moellendorffii]
Length = 377
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 13/141 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------LERG-- 225
+HL G++ R +LL +KPV+VFDG P+LKK + R++ +E+G
Sbjct: 59 TSHLQGMFTRTVRLLESGMKPVYVFDGKPPELKKAELVKRGARREEATEGLTEAIEKGEV 118
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH-TQGVITDD 280
K ++ +T+Q + + Q+LL+L G+P I AP EAEA+CA+L + V ++D
Sbjct: 119 ADIEKYSKRTVKVTKQHNEDCQKLLRLMGIPVIEAPCEAEAECAALCKADKVVYAVASED 178
Query: 281 SDIWLFGARTVYKNFFDKKSH 301
D FG+ ++ + S
Sbjct: 179 MDSLTFGSPRFLRHLMEPASR 199
>gi|119872195|ref|YP_930202.1| flap endonuclease-1 [Pyrobaculum islandicum DSM 4184]
gi|166973706|sp|A1RSC7.1|FEN_PYRIL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|119673603|gb|ABL87859.1| flap endonuclease 1 [Pyrobaculum islandicum DSM 4184]
Length = 346
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLER--------- 224
+HL GL++R L+ IKPV+VFDG P+ K I K +++ + E
Sbjct: 59 TSHLSGLFYRTINLMEAGIKPVYVFDGKPPEFKLAEIEERRKVKEKAMEEVLKAIKEGRK 118
Query: 225 ---GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K + A +T M +A++LL GVP++ AP E EAQ A + H V + D
Sbjct: 119 EDVAKYMKRAVFLTSDMVEDAKKLLTYMGVPWVQAPSEGEAQAAHMAKRGHCWAVGSQDY 178
Query: 282 DIWLFGARTVYKNF 295
D LFG+ + +N
Sbjct: 179 DSLLFGSPRLVRNL 192
>gi|115391513|ref|XP_001213261.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114194185|gb|EAU35885.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 870
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 23/149 (15%)
Query: 147 VDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
+ + D+SIWL Q+ G GG N L L++R+ K L I P+FV+DG
Sbjct: 33 IRIAVDISIWLFQVQAGR----GGR--NPELRTLFYRLLKFLALPIHPLFVYDG------ 80
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
R++ +RGK T S + R ++ L+ LF P APGEAEA+CA
Sbjct: 81 ----------REKPPFKRGKATG-GSYGNAPIVRLSKILVDLFKFPRHNAPGEAEAECAR 129
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNF 295
L+ V+++D D +FG+ NF
Sbjct: 130 LQRAGVVDCVMSNDVDALMFGSTLTIMNF 158
>gi|34558672|gb|AAQ75078.1| RAD2 [Cryptosporidium parvum]
Length = 1147
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 213 LEKDRDQLLLERGKQ-TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
LEK++++L LE K L S IT++M + LL+ G+P+I +PGEAEAQ + L N
Sbjct: 853 LEKEQEELSLEFTKHDIILNSEITKEMQYQICLLLKALGIPWIDSPGEAEAQASILTQLN 912
Query: 272 HTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
GV++DDSD +FGA+ +++NFF S V Y ++ Y
Sbjct: 913 ICHGVLSDDSDCLIFGAKKIFRNFFSGNS-VEMYDLNQVKKYL 954
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIWL Q G D G AHL+G + R+CKLL++ I PV VFDG P +KK+
Sbjct: 27 LAIDASIWLKQFLMGLKDKEGKIPQGAHLLGFFKRLCKLLYYGILPVIVFDGTPPDIKKR 86
Query: 209 TIS--TLEKDRDQLLLERGKQTRLASTI 234
T+ ++++ ++ + R L +TI
Sbjct: 87 TLELRRMQREMSEINMRRVANKLLLNTI 114
>gi|66356946|ref|XP_625651.1| XPG, DNA excision repair protein, flap endonuclease
[Cryptosporidium parvum Iowa II]
gi|46226699|gb|EAK87678.1| XPG, DNA excision repair protein, flap endonuclease
[Cryptosporidium parvum Iowa II]
Length = 1147
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 213 LEKDRDQLLLERGKQ-TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
LEK++++L LE K L S IT++M + LL+ G+P+I +PGEAEAQ + L N
Sbjct: 853 LEKEQEELSLEFTKHDIILNSEITKEMQYQICLLLKALGIPWIDSPGEAEAQASILTQLN 912
Query: 272 HTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPDIRYYF 314
GV++DDSD +FGA+ +++NFF S V Y ++ Y
Sbjct: 913 ICHGVLSDDSDCLIFGAKKIFRNFFSGNS-VEMYDLNQVKKYL 954
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIWL Q G D G AHL+G + R+CKLL++ I PV VFDG P +KK+
Sbjct: 27 LAIDASIWLKQFLMGLKDKEGKIPQGAHLLGFFKRLCKLLYYGILPVIVFDGTPPDIKKR 86
Query: 209 TIS--TLEKDRDQLLLERGKQTRLASTI 234
T+ ++++ ++ + R L +TI
Sbjct: 87 TLELRRMQREMSEINMRRVANKLLLNTI 114
>gi|409048552|gb|EKM58030.1| hypothetical protein PHACADRAFT_90326 [Phanerochaete carnosa
HHB-10118-sp]
Length = 320
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 13/153 (8%)
Query: 152 DVSIWLHQLTKGTH-DLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
D +WLH+ T DLA G ++ HR+ L + I P VFDGG KK T
Sbjct: 30 DAYVWLHRGTYACATDLATGKKTTKYVNYAMHRVRLLKHYNIIPYIVFDGGPLSAKKGTE 89
Query: 211 STLEKDRDQ------LLLERGKQTRL------ASTITEQMSREAQELLQLFGVPFIVAPG 258
S +K R++ L +GK T+ +T QM+ + + L+ V ++VAP
Sbjct: 90 SDRKKKREENLARANSLAAQGKHTQAREYYVKCIDVTPQMAFQFIKALRAENVAYVVAPY 149
Query: 259 EAEAQCASLELGNHTQGVITDDSDIWLFGARTV 291
EA+AQ A LE G++T+DSD+ +FG ++V
Sbjct: 150 EADAQMAYLERIGLVDGILTEDSDLLVFGCKSV 182
>gi|171186427|ref|YP_001795346.1| flap endonuclease-1 [Pyrobaculum neutrophilum V24Sta]
gi|226700955|sp|B1YC46.1|FEN_THENV RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|170935639|gb|ACB40900.1| XPG I domain protein [Pyrobaculum neutrophilum V24Sta]
Length = 349
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------LERGKQ 227
+HL GL++R L+ IKPV+VFDG P+ K I + +++ + + GK+
Sbjct: 59 TSHLSGLFYRTINLMEAGIKPVYVFDGKPPEFKLAEIEARRRVKEKAMEEVVKAIREGKR 118
Query: 228 TRLAST------ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
+A +T +M +A+ LL GVP++ AP E EAQ A + H V + D
Sbjct: 119 DDVAKYMKRVIFLTNEMVEDAKRLLTYMGVPWVQAPSEGEAQAAHMAKRGHCWAVGSQDY 178
Query: 282 DIWLFGARTVYKNF 295
D LFG+ + +N
Sbjct: 179 DSLLFGSPRLVRNL 192
>gi|308504826|ref|XP_003114596.1| CRE-CRN-1 protein [Caenorhabditis remanei]
gi|308258778|gb|EFP02731.1| CRE-CRN-1 protein [Caenorhabditis remanei]
Length = 382
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 12/139 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------LLERG-- 225
+HL+G+++R +++ IKPV+VFDG P +K + + R + E+G
Sbjct: 61 TSHLMGMFYRTIRMIDNGIKPVYVFDGKPPDMKSGELEKRSERRAEAEKALTEAKEKGDA 120
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K R +T+Q + + ++LL L G+P + AP EAEAQCA L G T+D
Sbjct: 121 KEAEKFERRLVKVTKQQNEDVKQLLGLMGIPVVEAPCEAEAQCAHLVKAGKVFGTATEDM 180
Query: 282 DIWLFGARTVYKNFFDKKS 300
D FG+ + ++ +S
Sbjct: 181 DALTFGSCVLLRHLLAPES 199
>gi|71023659|ref|XP_762059.1| hypothetical protein UM05912.1 [Ustilago maydis 521]
gi|74699231|sp|Q4P1V1.1|FEN1_USTMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|46101624|gb|EAK86857.1| hypothetical protein UM05912.1 [Ustilago maydis 521]
Length = 374
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS-----------TLEKDRDQLLL 222
+HL+G ++R +++ + IKP++VFDG P LKK+ + E+ +D
Sbjct: 62 TSHLLGFFYRTLRMIDYGIKPMYVFDGTPPDLKKELLQKRFGRREEAREQEEEQKDVADA 121
Query: 223 ERGKQ-TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E+ Q R T Q + E + LL+L G+P ++AP EAEAQCA L ++D
Sbjct: 122 EKMDQLARRQVRPTRQHNEEVRHLLKLMGIPCVIAPSEAEAQCAELARAGKVYAAGSEDM 181
Query: 282 DIWLFGARTVYKNF 295
D FG + K+
Sbjct: 182 DTLTFGTPILLKHL 195
>gi|82231650|sp|Q5I4H3.1|FEN1_XIPMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|57639537|gb|AAW55636.1| flap endonuclease-1 [Xiphophorus maculatus]
gi|57639539|gb|AAW55637.1| flap endonuclease-1 [Xiphophorus maculatus]
Length = 380
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDR---DQLLL---ERGKQ 227
+HL+G+++R ++L IKPV+VFDG PQLK + + R +++L E G+Q
Sbjct: 61 TSHLMGMFYRTIRMLENGIKPVYVFDGKPPQLKSAELEKRGERRAEAEKMLAKAQELGEQ 120
Query: 228 ------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
++ +T+Q + + ++LL L GVP+I AP EAEA CA+L T+D
Sbjct: 121 ENIDKFSKRLVKVTKQHNDDCKKLLTLMGVPYIEAPCEAEASCAALVKEGKVFATATEDM 180
Query: 282 DIWLFGARTVYKNF 295
D FG + ++
Sbjct: 181 DGLTFGTNVLLRHL 194
>gi|395646325|ref|ZP_10434185.1| Flap structure-specific endonuclease [Methanofollis liminatans DSM
4140]
gi|395443065|gb|EJG07822.1| Flap structure-specific endonuclease [Methanofollis liminatans DSM
4140]
Length = 333
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------LLERG-- 225
+HL G++ R L I+P ++FDG P LK +T++ R+ +ERG
Sbjct: 56 TSHLSGIFFRNLNFLEKGIRPAYIFDGAPPDLKTETVARRRGVREAAGERWKEAVERGDI 115
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
KQ R ++ I + M ++ LL L G+P++VAP E EAQ A + + D
Sbjct: 116 EEAYKQARASTRIDDAMIASSKRLLDLMGIPWMVAPSEGEAQAAFMARQGDVGAAASQDY 175
Query: 282 DIWLFGARTVYKNFFDKKSHVLRYTAPDIR 311
D LFGA + +N +R + +R
Sbjct: 176 DALLFGAPRLVRNLTVSGKRKVRGRSVTVR 205
>gi|145592541|ref|YP_001154543.1| flap endonuclease-1 [Pyrobaculum arsenaticum DSM 13514]
gi|166973704|sp|A4WNC4.1|FEN_PYRAR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|145284309|gb|ABP51891.1| flap endonuclease 1 [Pyrobaculum arsenaticum DSM 13514]
Length = 346
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI----STLEKDRDQLLL------- 222
+H+ GL++R L+ IKPV+VFDG P+ K I EK ++L+
Sbjct: 59 TSHISGLFYRTINLMEAGIKPVYVFDGKPPEFKLAEIEERRKAKEKATEELVRAIKEGRR 118
Query: 223 -ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K + A +T +M +A++LL GVP++ AP E EAQ A + H V + D
Sbjct: 119 DEVAKYAKRAIFLTNEMVEDAKKLLTYMGVPWVQAPSEGEAQAAYMARRGHCWAVGSQDY 178
Query: 282 DIWLFGARTVYKNF 295
D LFG+ + +N
Sbjct: 179 DSLLFGSPRLVRNL 192
>gi|19112842|ref|NP_596050.1| exonuclease I Exo1 [Schizosaccharomyces pombe 972h-]
gi|1706728|sp|P53695.1|EXO1_SCHPO RecName: Full=Exodeoxyribonuclease 1; AltName:
Full=Exodeoxyribonuclease I; Short=EXO I;
Short=Exonuclease I
gi|703466|gb|AAC41648.1| exonuclease [Schizosaccharomyces pombe]
gi|4007793|emb|CAA22433.1| exonuclease I Exo1 [Schizosaccharomyces pombe]
Length = 571
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 152 DVSIWLHQ-LTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
D +WLH+ + H+LA + +L H+ L ++ +KP+ VFDGG P K +
Sbjct: 30 DGYVWLHKAVFTCAHELAFNKETDKYLKYAIHQALMLQYYGVKPLIVFDGG-PLPCKAST 88
Query: 211 STLEKDRDQLLLERGK-------------QTRLASTITEQMSREAQELLQLFGVPFIVAP 257
K+R Q E GK Q +T +M+ + L+ G+ IVAP
Sbjct: 89 EQKRKERRQEAFELGKKLWDEGKKSQAIMQFSRCVDVTPEMAWKLIIALREHGIESIVAP 148
Query: 258 GEAEAQCASLELGNHTQGVITDDSDIWLFGARTV 291
EA+AQ LE N G+IT+DSD+ +FGA+TV
Sbjct: 149 YEADAQLVYLEKENIIDGIITEDSDMLVFGAQTV 182
>gi|260798636|ref|XP_002594306.1| hypothetical protein BRAFLDRAFT_275596 [Branchiostoma floridae]
gi|317374877|sp|C3ZBT0.1|FEN1_BRAFL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|229279539|gb|EEN50317.1| hypothetical protein BRAFLDRAFT_275596 [Branchiostoma floridae]
Length = 380
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERGK------- 226
+HL+G+++R +++ IKPV+VFDG P +K ++ + R++ K
Sbjct: 61 TSHLMGMFYRTIRMVDNGIKPVYVFDGKPPNMKSGELAKRAERREEAQKALEKAEEAGEA 120
Query: 227 ------QTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDD 280
Q RL +T++ + E ++LL L G+P++ AP EAEAQCA L T+D
Sbjct: 121 EDVNKFQKRLVK-VTKEHNAECKKLLTLMGIPYVDAPCEAEAQCAELAKKGKVYAAGTED 179
Query: 281 SDIWLFGARTVYKNF 295
D+ FG + ++
Sbjct: 180 MDVLTFGTNIMLRHL 194
>gi|389634309|ref|XP_003714807.1| flap structure-specific endonuclease [Magnaporthe oryzae 70-15]
gi|351647140|gb|EHA55000.1| flap structure-specific endonuclease [Magnaporthe oryzae 70-15]
gi|440465671|gb|ELQ34981.1| flap structure-specific endonuclease [Magnaporthe oryzae Y34]
gi|440490374|gb|ELQ69936.1| flap structure-specific endonuclease [Magnaporthe oryzae P131]
Length = 932
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 22/145 (15%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDG-GVPQLKKQTI 210
D+SIW Q+ GG+ NA L++R+ +LL I+P+FVFDG P K+
Sbjct: 38 DISIWQFQI----QAARGGA--NAPTRTLFYRLARLLGHSIQPIFVFDGPNKPAFKRNRR 91
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
ST RG T ++ M A+ +++LFG F APGEAEA+CA L+
Sbjct: 92 STT----------RGGAT--GDVVSNAM---AKRMIRLFGFQFHEAPGEAEAECALLQRR 136
Query: 271 NHTQGVITDDSDIWLFGARTVYKNF 295
V+++D D +FG +N+
Sbjct: 137 GIVDAVLSEDVDTIMFGCTRTLRNW 161
>gi|67524613|ref|XP_660368.1| hypothetical protein AN2764.2 [Aspergillus nidulans FGSC A4]
gi|74597180|sp|Q5B9L6.1|FEN1_EMENI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|40744016|gb|EAA63198.1| hypothetical protein AN2764.2 [Aspergillus nidulans FGSC A4]
gi|259486319|tpe|CBF84062.1| TPA: 5' to 3' exonuclease, 5' flap endonuclease (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 395
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 144 KLLVDL-ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGV 202
K+ +D +S S + ++G ++ +HL+G+++R +++ IKP++VFDG
Sbjct: 30 KVAIDASMSIYSFLIAVRSEGQQLMSDTGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAP 89
Query: 203 PQLKKQTIS--TLEKDRDQLLLERGKQT----------RLASTITEQMSREAQELLQLFG 250
P+LK ++ + K E K+T R +T + + E ++LL+L G
Sbjct: 90 PKLKSGELAKRSARKHEATEAHEEAKETGTAEDVEKFSRRTVRVTREHNAECKKLLKLMG 149
Query: 251 VPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
+P+I AP EAEAQCA L ++D D F A
Sbjct: 150 IPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEA 187
>gi|337283806|ref|YP_004623280.1| flap endonuclease-1 [Pyrococcus yayanosii CH1]
gi|334899740|gb|AEH24008.1| flap endonuclease-1 [Pyrococcus yayanosii CH1]
Length = 341
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Query: 139 NIVINKLLVDLISDVSIWLHQLTK--GTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVF 196
N+ K+ +D ++ + +L + + GT + +HL GL++R L+ IKP +
Sbjct: 18 NLYGKKVAIDALNAIYQFLSTIRQRDGTPLMDSKGRITSHLSGLFYRTINLMEAGIKPAY 77
Query: 197 VFDGGVPQLKKQTISTLEKDRDQLL------LERG------KQTRLASTITEQMSREAQE 244
VFDG P KK+ + + R++ LERG K + A+ + E + +A++
Sbjct: 78 VFDGKPPAFKKKELEKRREAREEAEERWREALERGNIEEARKYAQRATRVNEALVEDAKK 137
Query: 245 LLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
LL+L G+P I AP E EAQ A + + D D LFGA + +N
Sbjct: 138 LLELMGIPVIQAPSEGEAQAAYIAAKGAVYASASQDYDSLLFGAPRLVRNL 188
>gi|154294321|ref|XP_001547602.1| hypothetical protein BC1G_13933 [Botryotinia fuckeliana B05.10]
Length = 768
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 152 DVSIWLHQLT-KGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
D WLH+ T DLA G ++ HR+ LL F + P +FDG K T
Sbjct: 30 DAYGWLHRGTVSCAMDLAMGKPTRKYVEYCMHRVRMLLHFGVTPYLIFDGDYLPSKAATE 89
Query: 211 STLEKDR------DQLLLERGKQTRL------ASTITEQMSREAQELLQLFGVPFIVAPG 258
EK R Q LL GK ++ A +T +M+R + L+ GV ++VAP
Sbjct: 90 KDREKRRKDSKRLGQELLNAGKTSQAYLEFQKAVDVTPEMARHVIDELKEMGVQYVVAPY 149
Query: 259 EAEAQCASLELGNHTQGVITDDSDIWLFGARTV 291
EA+AQ LE G++++DSD+ +FGA+ +
Sbjct: 150 EADAQMVYLERKGVIDGILSEDSDLLVFGAKCL 182
>gi|347827667|emb|CCD43364.1| similar to exonuclease [Botryotinia fuckeliana]
Length = 768
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 152 DVSIWLHQLT-KGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
D WLH+ T DLA G ++ HR+ LL F + P +FDG K T
Sbjct: 30 DAYGWLHRGTVSCAMDLAMGKPTRKYVEYCMHRVRMLLHFGVTPYLIFDGDYLPSKAATE 89
Query: 211 STLEKDR------DQLLLERGKQTRL------ASTITEQMSREAQELLQLFGVPFIVAPG 258
EK R Q LL GK ++ A +T +M+R + L+ GV ++VAP
Sbjct: 90 KDREKRRKDSKRLGQELLNAGKTSQAYLEFQKAVDVTPEMARHVIDELKEMGVQYVVAPY 149
Query: 259 EAEAQCASLELGNHTQGVITDDSDIWLFGARTV 291
EA+AQ LE G++++DSD+ +FGA+ +
Sbjct: 150 EADAQMVYLERKGVIDGILSEDSDLLVFGAKCL 182
>gi|193084162|gb|ACF09827.1| XPG I flap structure-specific endonuclease [uncultured marine
crenarchaeote AD1000-207-H3]
Length = 341
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 162 KGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS--TLEKDRDQ 219
+G H + +HL GL HR L IKPV+VFDG P LK I L K
Sbjct: 43 EGLHLTDSRGMVTSHLTGLLHRNINFLSMGIKPVYVFDGRPPSLKTAEIQRRKLGKIEAT 102
Query: 220 LLLERGKQT----------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLEL 269
+ E+ K + + +++ E M +++ LL LFG+P+I A + EA A +
Sbjct: 103 IKYEKAKASGDFESARKYAQQTTSMQETMVEDSKHLLDLFGIPYIQAKADGEATAAHMNK 162
Query: 270 GNHTQGVITDDSDIWLFGARTVYKNF 295
V + D D LFGA + +NF
Sbjct: 163 TGKAYAVASQDYDSILFGATKLVRNF 188
>gi|303279240|ref|XP_003058913.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460073|gb|EEH57368.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 360
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLL----------- 222
+HL G++ R C++L IKPV+VFDG P +K ++ + RD+
Sbjct: 62 TSHLQGMFMRTCRMLEAGIKPVYVFDGKPPTMKGGELAKRKDKRDEAEAALAKAKEAGDQ 121
Query: 223 -ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K ++ +T Q S+E +L +L G+P AP EAEA CA+L ++D
Sbjct: 122 EEIEKMSKRTVRVTRQQSQEVMQLARLMGLPVFEAPCEAEASCAALCKAGLVYAAASEDM 181
Query: 282 DIWLFGARTVYKNFFDKKSH 301
D F + +N S
Sbjct: 182 DTLCFACPKLARNLMSPASQ 201
>gi|449549056|gb|EMD40022.1| hypothetical protein CERSUDRAFT_132799 [Ceriporiopsis subvermispora
B]
Length = 409
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 16/129 (12%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL------------ 221
+HL+G ++R +++ IKP +VFDG P+LK +S + R++
Sbjct: 62 TSHLMGFFYRTIRMVENGIKPAYVFDGKPPELKAGVLSKRFERREEAKEEGEEAKEVGTA 121
Query: 222 --LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITD 279
+ER TR +T++ + E + LL L G+PF+VAP EAEAQCA L G ++
Sbjct: 122 EDVER--FTRRTVKVTKEHNEECRRLLGLMGIPFVVAPSEAEAQCAELARGGKVYAAGSE 179
Query: 280 DSDIWLFGA 288
D D F +
Sbjct: 180 DMDTLTFAS 188
>gi|317374921|sp|B6QT52.2|FEN1_PENMQ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 12/127 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS--TLEKDRDQLLLERGKQT--- 228
+HL+G+++R +++ IKP++VFDG P++K ++ + K E K+T
Sbjct: 61 TSHLMGMFYRTLRIVDNGIKPLYVFDGAPPKMKGGELAKRSARKREAHEAHEEAKETGTA 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E ++LL+L GVP+I AP EAEAQCA L ++D
Sbjct: 121 EDMEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLFGA 288
D F A
Sbjct: 181 DTLCFEA 187
>gi|282165429|ref|YP_003357814.1| flap structure-specific endonuclease [Methanocella paludicola
SANAE]
gi|282157743|dbj|BAI62831.1| flap structure-specific endonuclease [Methanocella paludicola
SANAE]
Length = 339
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD-----------QLLL 222
+HL G+ +R+ L+ IKPVFV+DG P LK +TI + R+
Sbjct: 55 TSHLSGIIYRVTNLVEQGIKPVFVYDGKPPVLKAETIKARREVREAARQMYEAARAAGSA 114
Query: 223 ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
E K + +++I Q+ ++++ELL G+PF++AP E EAQ A + V + D D
Sbjct: 115 EAYKYAQASTSINAQIIKDSKELLGYMGMPFLIAPSEGEAQAAYMVQKGAADFVGSQDYD 174
Query: 283 IWLFGARTVYKN 294
LFGA + +N
Sbjct: 175 SLLFGAPRMVRN 186
>gi|322694691|gb|EFY86514.1| exonuclease [Metarhizium acridum CQMa 102]
Length = 751
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 149 LISDVSIWLHQLTKGTH-DLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK 207
L D WLH+ +L G ++ HR+ L F I P VFDG K
Sbjct: 27 LAVDAYGWLHRAAYSCAVELGQGKPTKRYVNAAMHRVRMLQHFGITPYMVFDGDYLPSKA 86
Query: 208 QTISTLEKDRDQL------LLERGKQTRLAST------ITEQMSREAQELLQLFGVPFIV 255
T ++ K R++ LL+ GK ++ A +T +M+ + L+ G+P++V
Sbjct: 87 ATENSRAKRREEKKKLANDLLKAGKTSQAAQEFQNCIDVTPEMASTLIQQLKQMGIPYVV 146
Query: 256 APGEAEAQCASLELGNHTQGVITDDSDIWLFGAR 289
AP EA+AQ LE G+I+DDSD+ +FGA+
Sbjct: 147 APYEADAQLVYLERQGLVNGIISDDSDLLVFGAK 180
>gi|239607122|gb|EEQ84109.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 816
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 20/149 (13%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+SIWL Q+ G GG+ N L L++R+ +L + P+FV+DG PQ
Sbjct: 38 DISIWLFQIQAG----KGGT--NPELRTLFYRLVRLTGLPVHPLFVYDG--PQRPTY--- 86
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
R +L+ G+ T + ++ R ++ L+ LF P APGEAEA+CA L+
Sbjct: 87 ----KRGKLI---GRNTGVGDL--GRVIRRSKYLIDLFRFPHHTAPGEAEAECARLQTSG 137
Query: 272 HTQGVITDDSDIWLFGARTVYKNFFDKKS 300
V+++D D +FG++ NF + S
Sbjct: 138 VVDAVMSNDVDAIMFGSKVTIMNFSKENS 166
>gi|379005480|ref|YP_005261152.1| flap structure-specific endonuclease [Pyrobaculum oguniense TE7]
gi|375160933|gb|AFA40545.1| flap structure-specific endonuclease [Pyrobaculum oguniense TE7]
Length = 346
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS----TLEKDRDQLLL------- 222
+H+ GL++R L+ IKPV+VFDG P+ K I EK ++L+
Sbjct: 59 TSHISGLFYRTINLMEAGIKPVYVFDGKPPEFKLAEIEERRRAKEKATEELVRAIKEGRR 118
Query: 223 -ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K + A +T +M +A+ LL GVP++ AP E EAQ A + H V + D
Sbjct: 119 DEVAKYAKRAIFLTNEMVEDAKRLLTYMGVPWVQAPSEGEAQAAYMARRGHCWAVGSQDY 178
Query: 282 DIWLFGARTVYKNF 295
D LFG+ + +N
Sbjct: 179 DSLLFGSPRLVRNL 192
>gi|330689555|pdb|3Q8M|A Chain A, Crystal Structure Of Human Flap Endonuclease Fen1 (D181a)
In Complex With Substrate 5'-Flap Dna And K+
gi|330689556|pdb|3Q8M|B Chain B, Crystal Structure Of Human Flap Endonuclease Fen1 (D181a)
In Complex With Substrate 5'-Flap Dna And K+
Length = 341
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLLERG-------- 225
+HL+G+++R +++ IKPV+VFDG PQLK ++ + R + +
Sbjct: 60 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 119
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K T+ +T+Q + E + LL L G+P++ AP EAEA CA+L T+D
Sbjct: 120 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 179
Query: 282 DIWLFGARTVYKNF 295
FG+ + ++
Sbjct: 180 ACLTFGSPVLMRHL 193
>gi|428169298|gb|EKX38233.1| ERCC5/XPG/Rad2 nucleotide excision repair [Guillardia theta
CCMP2712]
Length = 118
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SIW+ Q K G NAHL+G++ RICKLLF K+KPV VFDG P +K++T+
Sbjct: 30 DASIWIIQFIKAMRQSDGSMQQNAHLLGMFRRICKLLFMKVKPVIVFDGVAPAIKRKTLQ 89
Query: 212 TLEKDRDQ 219
++ R +
Sbjct: 90 ARKRVRQR 97
>gi|327351073|gb|EGE79930.1| XPG family protein [Ajellomyces dermatitidis ATCC 18188]
Length = 838
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 20/149 (13%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D+SIWL Q+ G GG+ P L L++R+ +L + P+FV+DG PQ
Sbjct: 38 DISIWLFQIQAG----KGGTNP--ELRTLFYRLVRLTGLPVHPLFVYDG--PQRPTY--- 86
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
R +L+ G+ T + ++ R ++ L+ LF P APGEAEA+CA L+
Sbjct: 87 ----KRGKLI---GRNTGVGDL--GRVIRRSKYLIDLFRFPHHTAPGEAEAECARLQTSG 137
Query: 272 HTQGVITDDSDIWLFGARTVYKNFFDKKS 300
V+++D D +FG++ NF + S
Sbjct: 138 VVDAVMSNDVDAIMFGSKVTIMNFSKENS 166
>gi|317376190|sp|D3BN56.1|FEN1_POLPA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|281203217|gb|EFA77418.1| XPG [Polysphondylium pallidum PN500]
Length = 388
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 20/156 (12%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNA------HLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S ++Q + G ++ NA HL G+++R KL+ IKP++VFDG P L
Sbjct: 34 DASTSMYQFLIAINTEMGAALMNANGETTSHLQGMFYRTIKLMTRGIKPIYVFDGKAPVL 93
Query: 206 KKQTIS---TLEKDRDQLLLERGK----------QTRLASTITEQMSREAQELLQLFGVP 252
K ++ K+ +Q L E + Q R S +Q + E ++LL+L GVP
Sbjct: 94 KSGELAKRYARRKEAEQQLEEANEVGNSEDVQKFQKRTISASRKQ-NEECKKLLELMGVP 152
Query: 253 FIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGA 288
+ AP EAEAQCA L G ++D D G
Sbjct: 153 IVQAPCEAEAQCAELCKGGKAWATGSEDMDSLTLGT 188
>gi|397639140|gb|EJK73406.1| hypothetical protein THAOC_04971, partial [Thalassiosira oceanica]
Length = 269
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 45/61 (73%)
Query: 250 GVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLRYTAPD 309
G+P++ +P EAEAQCA+LE GV+T+DSDI++FG + VYKNFFD++ V Y A D
Sbjct: 4 GIPWVESPSEAEAQCAALERLGLVDGVVTEDSDIFVFGGQKVYKNFFDEQKFVEAYYARD 63
Query: 310 I 310
I
Sbjct: 64 I 64
>gi|159905743|ref|YP_001549405.1| flap endonuclease-1 [Methanococcus maripaludis C6]
gi|159887236|gb|ABX02173.1| XPG I domain protein [Methanococcus maripaludis C6]
Length = 324
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 12/129 (9%)
Query: 179 GLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL---LERGKQTRL----- 230
G++++ +L ++ P++VFDG LK++T K R+ L LE +Q L
Sbjct: 60 GIFYKTIYMLENEMTPIWVFDGKSHDLKEKTKEERRKSRNGALDSYLEAKEQNNLEEMQK 119
Query: 231 ----ASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
A+ + +++ +++LL+L G+P+I AP E EAQCA L N VI+ D D L+
Sbjct: 120 YAKRANFLDKKIIDNSKKLLELMGIPYIDAPSEGEAQCAELVKANDAFCVISQDYDSILY 179
Query: 287 GARTVYKNF 295
GA V KN
Sbjct: 180 GAENVVKNI 188
>gi|399217224|emb|CCF73911.1| unnamed protein product [Babesia microti strain RI]
Length = 895
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 245 LLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKSHVLR 304
LL+LF +P I AP EAEAQCA L + GVI+DDSD +FGA V KNFF+K+ ++
Sbjct: 616 LLKLFKIPIIFAPSEAEAQCAQLNIEQSVYGVISDDSDTLVFGAIRVVKNFFNKQRNLEL 675
Query: 305 YTAPDIR 311
Y + +I+
Sbjct: 676 YQSQNIK 682
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK---- 207
D S W+ ++ + G + + + RICKLL +KI P+ VFDG P K+
Sbjct: 90 DGSFWIRHISASREN---GKYDSDFIAIFFKRICKLLSYKIIPIIVFDGIAPDAKRSEIN 146
Query: 208 ---QTISTLEKDRDQLLLER-GKQT 228
QTIS + +L L+R +QT
Sbjct: 147 HRTQTISKISDKHRRLTLKRIARQT 171
>gi|156843134|ref|XP_001644636.1| hypothetical protein Kpol_526p31 [Vanderwaltozyma polyspora DSM
70294]
gi|156115283|gb|EDO16778.1| hypothetical protein Kpol_526p31 [Vanderwaltozyma polyspora DSM
70294]
Length = 487
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 19/150 (12%)
Query: 156 WLHQLT-KGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLE 214
WLH+ + HDL G+ + +L ++ L + IKP FVFDG +KK T
Sbjct: 34 WLHRASCSCAHDLVLGNPTDKYLQFFIKKLAMLKSYGIKPYFVFDGDSLPVKKDTEV--- 90
Query: 215 KDRDQLLLERGKQTRLAST---------------ITEQMSREAQELLQLFGVPFIVAPGE 259
K R++ + R RL ++ +T +M++ + Q+ + +IVAP E
Sbjct: 91 KRRNKRVENREVAIRLYNSGEVRNSMDYFQKCVDVTPEMAKCVMDYCQIHHIDYIVAPFE 150
Query: 260 AEAQCASLELGNHTQGVITDDSDIWLFGAR 289
A+AQ LE N QG+I++DSD+ +FG R
Sbjct: 151 ADAQMVYLEKQNIVQGIISEDSDLLIFGCR 180
>gi|406697519|gb|EKD00778.1| single-stranded DNA specific endodeoxyribonuclease [Trichosporon
asahii var. asahii CBS 8904]
Length = 1166
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 204 QLKKQTISTLEKDRDQLLLERGKQTRLA----STITEQMSREAQELLQLFGVPFIVAPGE 259
Q+K + ++ + + D+ + QT+ A IT+ M + Q LL+ FG+P+I AP E
Sbjct: 763 QIKGRDLTDVRTEIDEEIRVLNTQTKAAMRDSDEITQAMVVQIQTLLRHFGIPYITAPME 822
Query: 260 AEAQCASL-ELGNHTQGVITDDSDIWLFGARTVYKNFFD 297
AEAQCA L ELG G+ITDDSD++LFG +KN F+
Sbjct: 823 AEAQCAKLAELG-LVDGIITDDSDVFLFGGTQCFKNIFN 860
>gi|389641011|ref|XP_003718138.1| exonuclease 1 [Magnaporthe oryzae 70-15]
gi|351640691|gb|EHA48554.1| exonuclease 1 [Magnaporthe oryzae 70-15]
gi|440475111|gb|ELQ43812.1| exonuclease 1 [Magnaporthe oryzae Y34]
gi|440490176|gb|ELQ69760.1| exonuclease 1 [Magnaporthe oryzae P131]
Length = 780
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 13/154 (8%)
Query: 149 LISDVSIWLHQ-LTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK 207
L D WLH+ +LA G ++ HR+ + +F P VFDG K
Sbjct: 27 LAVDAYGWLHRGAVSCALELAQGKPTRKYVDFAMHRVRMVKYFGATPYIVFDGDFLPSKA 86
Query: 208 QTISTLEKDRDQL------LLERGKQTRL------ASTITEQMSREAQELLQLFGVPFIV 255
T ++ K R++ LL+ GK + A +T +M+RE E L+ VP++V
Sbjct: 87 LTEASRAKRREESKKAGMELLKAGKPAQAYQEFQKAIDVTPEMARELIEELKKIDVPYVV 146
Query: 256 APGEAEAQCASLELGNHTQGVITDDSDIWLFGAR 289
AP EA+AQ LE + G+I++DSD+ +FGA+
Sbjct: 147 APYEADAQMVYLERNGYVSGIISEDSDLLVFGAK 180
>gi|336365482|gb|EGN93832.1| hypothetical protein SERLA73DRAFT_188945 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378041|gb|EGO19200.1| hypothetical protein SERLADRAFT_479560 [Serpula lacrymans var.
lacrymans S7.9]
Length = 407
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 26/134 (19%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIST-------------------LE 214
+HL+G ++R +++ IKPV+VFDG P++K +S
Sbjct: 62 TSHLMGFFYRTIRIVENGIKPVYVFDGKPPEMKAGVLSKRFEKREEAKEEGEEAKEIGTA 121
Query: 215 KDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQ 274
+D D+ +R +T + + E + LL+L G+P +VAP EAEAQCA L G
Sbjct: 122 EDMDKF-------SRRTVKVTREHNEECRRLLKLMGIPVVVAPSEAEAQCAELARGGKVY 174
Query: 275 GVITDDSDIWLFGA 288
++D D F A
Sbjct: 175 AAGSEDMDTLTFSA 188
>gi|317376210|sp|C4JDR3.2|FEN1_UNCRE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIST--LEKDRDQLLLERGKQT--- 228
+HL+GL++R +++ IKP++VFDG P+LK ++ K E K+T
Sbjct: 61 TSHLMGLFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRIARKQEAAEQHEEAKETGTT 120
Query: 229 -------RLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
R +T + + E ++LL+L G+P+I AP EAEAQCA L ++D
Sbjct: 121 EDVEKFSRRTVRVTREHNEECKKLLKLMGIPYINAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|317027813|ref|XP_001400048.2| rad2-like endonuclease [Aspergillus niger CBS 513.88]
Length = 875
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 147 VDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
+ + D+SIWL Q+ G GG N L L++R+ K+L I P+FV+DG
Sbjct: 33 IRIAVDISIWLFQVQAGR----GGR--NPELRTLFYRLLKILALPIHPLFVYDG------ 80
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+++ +RGK S + R ++ L+ LF P APGEAEA+CA
Sbjct: 81 ----------KNKPPFKRGKAVSSRSYGNAPIIRLSKILVDLFKFPRHEAPGEAEAECAR 130
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNF 295
L+ V+T+D D +FG+ F
Sbjct: 131 LQRAGVVDAVMTNDVDALMFGSTFTVMGF 159
>gi|20094004|ref|NP_613851.1| flap endonuclease-1 [Methanopyrus kandleri AV19]
gi|28380017|sp|Q8TXU4.1|FEN_METKA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|19886972|gb|AAM01781.1| 5'-3' exonuclease [Methanopyrus kandleri AV19]
Length = 348
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS--------TLEK-DRDQLLLER 224
+HL GL +R L+ IKPV+VFDG P LK++T+ +EK R + ER
Sbjct: 55 TSHLNGLLYRTVNLVEEGIKPVYVFDGEPPDLKRETLERRRERKEEAMEKLRRAKTKEER 114
Query: 225 GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIW 284
K R + + E + +A+ LL L G+P++ AP E EAQCA + + D D
Sbjct: 115 EKYARQVARLDESLVEDAKRLLDLMGIPWVQAPSEGEAQCAYMARCGDVWATGSQDYDSL 174
Query: 285 LFGARTVYKN--FFDKKSH 301
LFG+ + +N K+ H
Sbjct: 175 LFGSPRLVRNITIVGKRKH 193
>gi|68477053|ref|XP_717504.1| hypothetical protein CaO19.8182 [Candida albicans SC5314]
gi|68477234|ref|XP_717410.1| hypothetical protein CaO19.547 [Candida albicans SC5314]
gi|74586103|sp|Q5A6K8.1|FEN1_CANAL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|46439119|gb|EAK98441.1| hypothetical protein CaO19.547 [Candida albicans SC5314]
gi|46439217|gb|EAK98538.1| hypothetical protein CaO19.8182 [Candida albicans SC5314]
Length = 372
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 18/153 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q G + N +HL G+++R K++ IKPV+VFDG P L
Sbjct: 34 DASMCLYQFLIAVRQSDGQQLTNEDGETTSHLSGMFYRTIKMVENNIKPVYVFDGKPPVL 93
Query: 206 K-----KQTISTLEKDRDQLLL-------ERGKQTRLASTITEQMSREAQELLQLFGVPF 253
K K+ + E + + L E K + +T + + EA++LLQL G+P
Sbjct: 94 KGGELEKRLLRREEAQKQKTALGDEGTVEEVLKFEKRLVRVTREQNEEAKKLLQLMGIPC 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
+ AP EAEAQCA L G ++D D +
Sbjct: 154 VDAPCEAEAQCAELARGGKVYAAASEDMDTLCY 186
>gi|429329613|gb|AFZ81372.1| DNA-repair protein xp-G, putative [Babesia equi]
Length = 839
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 43/66 (65%)
Query: 232 STITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTV 291
S I + Q++L+LFG+P+IVAP EAE+QCA L VITDDSD +FGA V
Sbjct: 524 SNIIQDYHDAIQKMLKLFGIPYIVAPSEAESQCAHLNESGACYAVITDDSDALVFGANRV 583
Query: 292 YKNFFD 297
KNF++
Sbjct: 584 LKNFYN 589
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 152 DVSIWL-HQLTKGTHDLAGGSVPNAHLIGLYH-RICKLLFFKIKPVFVFDGGVPQLKKQT 209
D S WL H L ++ GG V IG++ RIC LL IKP+FVFDG P K++T
Sbjct: 30 DASFWLSHCLASESNMRHGGDV-----IGVFFLRICYLLEKGIKPIFVFDGKPPVAKRKT 84
Query: 210 I 210
+
Sbjct: 85 L 85
>gi|340518752|gb|EGR48992.1| nuclease-like protein [Trichoderma reesei QM6a]
Length = 733
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 156 WLHQLTKGTH-DLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLE 214
WLH+ +L G ++ G+ HR+ L F + P VFDG K T +
Sbjct: 31 WLHRAAYSCAVELGQGKPTKKYINGVLHRVKMLKHFGVTPYMVFDGDFLPSKAATEESRA 90
Query: 215 KDRDQLL------LERGKQTRLAST------ITEQMSREAQELLQLFGVPFIVAPGEAEA 262
K R++ L L+ GK ++ A IT +M+ + L+ +P++VAP EA+A
Sbjct: 91 KKREEKLKLANEYLKAGKPSQAAQEFQKCIDITPEMASALIQQLKKMDIPYVVAPYEADA 150
Query: 263 QCASLELGNHTQGVITDDSDIWLFGAR 289
Q LE G+I+DDSD+ +FGA+
Sbjct: 151 QLVYLERHGFVSGIISDDSDLLVFGAK 177
>gi|218884379|ref|YP_002428761.1| flap endonuclease-1 [Desulfurococcus kamchatkensis 1221n]
gi|322812496|pdb|3ORY|A Chain A, Crystal Structure Of Flap Endonuclease 1 From
Hyperthermophilic Archaeon Desulfurococcus Amylolyticus
gi|218765995|gb|ACL11394.1| Flap structure-specific endonuclease [Desulfurococcus kamchatkensis
1221n]
Length = 363
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ-------------L 220
+HL GL++R ++ IKPV+VFDG P+LK + I + +++ L
Sbjct: 69 TSHLSGLFYRTINIVEAGIKPVYVFDGKPPELKAREIERRKAVKEEAAKKYEEAVQSGDL 128
Query: 221 LLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDD 280
L R + +++ +TE+M R+A+ LL G+P++ AP E EAQ A + + D
Sbjct: 129 ELAR-RYAMMSAKLTEEMVRDAKSLLDAMGIPWVQAPAEGEAQAAYIVKKGDAYASASQD 187
Query: 281 SDIWLFGARTVYKNF 295
D LFG+ + +N
Sbjct: 188 YDSLLFGSPKLVRNL 202
>gi|344303968|gb|EGW34217.1| hypothetical protein SPAPADRAFT_148774 [Spathaspora passalidarum
NRRL Y-27907]
Length = 377
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q G + N +HL GL++R +L+ IKPV+VFDG P L
Sbjct: 34 DASMCLYQFLIAVRQSDGQQLTNEDGETTSHLSGLFYRTIRLVENNIKPVYVFDGKPPVL 93
Query: 206 KKQTISTLEKDRDQ------------LLLERGKQTRLASTITEQMSREAQELLQLFGVPF 253
K + + R++ + E K + ++ Q + EA++LL+L G+P
Sbjct: 94 KGGELEKRLQRREEAQKQMDSIKDEGTVAEVMKFEKRLVRVSRQQNDEARKLLELMGIPI 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
+ AP EAEAQCA L G ++D D +
Sbjct: 154 VNAPCEAEAQCAELARGGKVFAAASEDMDTLCY 186
>gi|45358876|ref|NP_988433.1| flap endonuclease-1 [Methanococcus maripaludis S2]
gi|45047742|emb|CAF30869.1| flap endonuclease [Methanococcus maripaludis S2]
Length = 324
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 12/129 (9%)
Query: 179 GLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL---LERGKQTRL----- 230
G++++ +L + P++VFDG +LK++T K R+ L +E +Q L
Sbjct: 60 GIFYKTIYMLENGMTPIWVFDGKSHELKEKTKEERRKSREGALDSYMEAKEQNNLEEMQK 119
Query: 231 ----ASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
A+ + ++ +++LL+L G+P++ AP E EAQCA L N+ VI+ D D L+
Sbjct: 120 YAKRANFLDKKTVDNSKKLLELMGIPYVNAPSEGEAQCAELVKANNAFCVISQDYDSILY 179
Query: 287 GARTVYKNF 295
GA V KN
Sbjct: 180 GAENVVKNI 188
>gi|166085105|dbj|BAF99817.1| flap endonuclease-1 [Aeropyrum pernix]
Length = 317
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKD------RDQLLLERG-- 225
+HL GL++R L+ IKPV+VFDG P++K + + K R + LE G
Sbjct: 25 TSHLSGLFYRTINLVEEGIKPVYVFDGKPPEMKSREVEERLKRKAEAEARYRRALEAGEV 84
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K +A+ +T M E++ELL G+P++ AP E EAQ A + + D
Sbjct: 85 EEARKYAMMAARLTSDMVEESKELLDAMGMPWVQAPAEGEAQAAYMARKGDAWATGSQDY 144
Query: 282 DIWLFGARTVYKNF 295
D LFG+ + +N
Sbjct: 145 DSLLFGSPRLVRNL 158
>gi|146423306|ref|XP_001487583.1| hypothetical protein PGUG_00960 [Meyerozyma guilliermondii ATCC
6260]
Length = 338
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK-----------KQTISTLEKDRDQLLL 222
+HL+G+++R +L+ IKP++VFDG P LK K+ + E +D +
Sbjct: 26 TSHLLGMFYRTIRLVENGIKPMYVFDGKPPVLKGGELEKRMIRKKEALKQQEDIKDTATV 85
Query: 223 ERG-KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E + + + +T++ + EA++LL+L G+P++ AP EAEAQCA L + ++D
Sbjct: 86 EEMVRYEKRSVRVTKEQNNEAKKLLELMGIPYVDAPCEAEAQCAELAVAGKVFAAASEDM 145
Query: 282 DIWLF 286
D +
Sbjct: 146 DTLCY 150
>gi|134056976|emb|CAK44323.1| unnamed protein product [Aspergillus niger]
Length = 872
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 147 VDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
+ + D+SIWL Q+ G GG N L L++R+ K+L I P+FV+DG
Sbjct: 33 IRIAVDISIWLFQVQAGR----GGR--NPELRTLFYRLLKILALPIHPLFVYDG------ 80
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+++ +RGK S + R ++ L+ LF P APGEAEA+CA
Sbjct: 81 ----------KNKPPFKRGKAVSSRSYGNAPIIRLSKILVDLFKFPRHEAPGEAEAECAR 130
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNF 295
L+ V+T+D D +FG+ F
Sbjct: 131 LQRAGVVDAVMTNDVDALMFGSTFTVMGF 159
>gi|390938891|ref|YP_006402629.1| flap endonuclease 1 [Desulfurococcus fermentans DSM 16532]
gi|390191998|gb|AFL67054.1| flap endonuclease 1 [Desulfurococcus fermentans DSM 16532]
Length = 363
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ-------------L 220
+HL GL++R ++ IKPV+VFDG P+LK + I + +++ L
Sbjct: 69 TSHLSGLFYRTINIVEAGIKPVYVFDGKPPELKAREIERRKAVKEEAAKKYEEAVQSGDL 128
Query: 221 LLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDD 280
L R + +++ +TE+M R+A+ LL G+P++ AP E EAQ A + + D
Sbjct: 129 ELAR-RYAMMSAKLTEEMVRDAKSLLDAMGIPWVQAPAEGEAQAAYIVKKGDAYASASQD 187
Query: 281 SDIWLFGARTVYKNF 295
D LFG+ + +N
Sbjct: 188 YDSLLFGSPKLVRNL 202
>gi|302508023|ref|XP_003015972.1| Rad2-like endonuclease, putative [Arthroderma benhamiae CBS 112371]
gi|291179541|gb|EFE35327.1| Rad2-like endonuclease, putative [Arthroderma benhamiae CBS 112371]
Length = 821
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 26/148 (17%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGG-VPQLKK 207
L D+SIWL Q+ GG+ N L L+ R+ +L+ I+P+FVFDG P K+
Sbjct: 88 LAVDISIWLFQVQAAQ----GGT--NPALRTLFFRLTRLISLPIQPIFVFDGPHRPDYKR 141
Query: 208 QTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASL 267
+ + Q+ L R +L++LF P +APGEAEA+CA L
Sbjct: 142 GRLVSKNAAAAQIELSR-------------------KLIELFSYPCHMAPGEAEAECAKL 182
Query: 268 ELGNHTQGVITDDSDIWLFGARTVYKNF 295
+ V+++D D +FG++ N+
Sbjct: 183 QQAGVVDAVMSNDVDALMFGSKVTLLNY 210
>gi|171679457|ref|XP_001904675.1| hypothetical protein [Podospora anserina S mat+]
gi|170939354|emb|CAP64582.1| unnamed protein product [Podospora anserina S mat+]
Length = 719
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 156 WLHQLTKGTH-DLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLE 214
WLH+ +LA G ++ HR+ ++ + P VFDG K +T S+ E
Sbjct: 34 WLHRGAIACAIELAQGKPTRKYVDFAMHRVRMFKYYGVTPYLVFDGDFLPSKAKTESSRE 93
Query: 215 KDRDQLL------LERGKQTRL------ASTITEQMSREAQELLQLFGVPFIVAPGEAEA 262
+ R+Q L L+ GK ++ A +T +M+R E L+ GVP++VAP EA+A
Sbjct: 94 QRREQSLKTGLELLKAGKPSKAHLELQKAIDVTPEMARHLIEELKKAGVPYLVAPYEADA 153
Query: 263 QCASLELGNHTQGVITDDSDIWLFGAR 289
Q LE G++++DSD+ +FGA+
Sbjct: 154 QLVYLEREGVISGIVSEDSDMLVFGAQ 180
>gi|348681508|gb|EGZ21324.1| hypothetical protein PHYSODRAFT_460533 [Phytophthora sojae]
Length = 305
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 25/122 (20%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQL--- 205
L D SIWL Q K D G + NAHL+G HR+ KLL++ ++PVFVFDG P++
Sbjct: 27 LAVDASIWLTQFVKAMRDDEGNMIRNAHLLGTLHRVAKLLYYGVRPVFVFDGQTPEIKKR 86
Query: 206 --------KKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPF-IVA 256
++Q + L ++LL R KQ R QE+ + G P VA
Sbjct: 87 TTARRRKRQEQQSANLRHTAQRILLNRLKQHR-------------QEMKKNGGAPAPAVA 133
Query: 257 PG 258
PG
Sbjct: 134 PG 135
>gi|317374880|sp|C4YLS2.1|FEN1_CANAW RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|238879915|gb|EEQ43553.1| structure-specific endonuclease RAD27 [Candida albicans WO-1]
Length = 372
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 18/153 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q G + N +HL G+++R K++ IKPV+VFDG P L
Sbjct: 34 DASMCLYQFLIAVRQSDGQQLTNEDGETTSHLSGMFYRTIKMVENNIKPVYVFDGKPPVL 93
Query: 206 K-----KQTISTLEKDRDQLLL-------ERGKQTRLASTITEQMSREAQELLQLFGVPF 253
K K+ + E + + L E K + +T + + EA++LLQL G+P
Sbjct: 94 KGGELEKRLLRREEAQKQKTALGDEGTVEEVLKFEKRLVRVTREQNEEAKKLLQLMGIPC 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
+ AP EAEAQCA L G ++D D +
Sbjct: 154 VDAPCEAEAQCAELARGGKVYAAASEDMDTLCY 186
>gi|166085107|dbj|BAF99818.1| flap endonuclease-1 [Aeropyrum pernix]
Length = 317
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKD------RDQLLLERG-- 225
+HL GL++R L+ IKPV+VFDG P++K + + K R + LE G
Sbjct: 25 TSHLSGLFYRTINLVEEGIKPVYVFDGKPPEMKSREVEERLKRKAEAEARYRRALEAGEV 84
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K +A+ +T M E++ELL G+P++ AP E EAQ A + + D
Sbjct: 85 EEARKYAMMAARLTSDMVEESKELLDAMGMPWVQAPAEGEAQAAYMARKGDAWATGSQDY 144
Query: 282 DIWLFGARTVYKNF 295
D LFG+ + +N
Sbjct: 145 DSLLFGSPRLVRNL 158
>gi|392589296|gb|EIW78627.1| PIN domain-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 318
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 149 LISDVSIWLHQ-LTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK 207
L D +WLH+ + +LA G N ++ R+ L KI+P VFDGG K+
Sbjct: 27 LAVDAYVWLHRGVYTCATELATGKRTNKYVDYAMSRVRLLKHHKIQPYIVFDGGPLPAKR 86
Query: 208 QTISTLEKDRDQLLLE------RGKQTRL------ASTITEQMSREAQELLQLFGVPFIV 255
T S ++ RD+ L +GK T+ +T QM+ + + L+ VP++V
Sbjct: 87 GTESERKQRRDENLARANALAAQGKHTQAREFYLKCVDVTPQMAFQLIKALRAEAVPYVV 146
Query: 256 APGEAEAQCASLELGNHTQGVITDDSDIWLFGARTV 291
AP EA+AQ A LE G+IT+DSD+ +FG + V
Sbjct: 147 APYEADAQLAYLERTGLVDGIITEDSDLLVFGCKHV 182
>gi|156084190|ref|XP_001609578.1| Rad2 endonuclease [Babesia bovis T2Bo]
gi|154796830|gb|EDO06010.1| Rad2 endonuclease, putative [Babesia bovis]
Length = 1002
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 245 LLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFF 296
LL LFGVPFIVAP EAEAQCA L GVI+DDSD FGA+ V+KNF+
Sbjct: 692 LLDLFGVPFIVAPSEAEAQCAHLNNTGLCFGVISDDSDTLAFGAKRVFKNFY 743
>gi|134045325|ref|YP_001096811.1| flap endonuclease-1 [Methanococcus maripaludis C5]
gi|132662950|gb|ABO34596.1| flap endonuclease 1 [Methanococcus maripaludis C5]
Length = 324
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 12/129 (9%)
Query: 179 GLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL---LERGKQTRL----- 230
G++++ +L ++ P++VFDG LK++T K R+ L LE +Q L
Sbjct: 60 GIFYKTIYMLENEMTPIWVFDGKSHDLKEKTKEERRKSRNGALDSYLEAKEQNNLEEMQK 119
Query: 231 ----ASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
A+ + ++ +++LL+L G+P+I AP E EAQCA L N VI+ D D L+
Sbjct: 120 YAKRANFLDKKTIDNSKKLLELMGIPYINAPSEGEAQCAELVKSNDAFCVISQDYDSILY 179
Query: 287 GARTVYKNF 295
GA V KN
Sbjct: 180 GAENVVKNI 188
>gi|367034598|ref|XP_003666581.1| hypothetical protein MYCTH_2311387 [Myceliophthora thermophila ATCC
42464]
gi|347013854|gb|AEO61336.1| hypothetical protein MYCTH_2311387 [Myceliophthora thermophila ATCC
42464]
Length = 894
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 31/164 (18%)
Query: 138 CNIVINKL-----LVDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKI 192
C + I+ L + L D SIW Q+ GG+ N + L++R+ +LL I
Sbjct: 19 CKLAIDTLEQTGRPLRLAIDFSIWQFQVQAAR----GGA--NPAIRTLFYRLTRLLGLAI 72
Query: 193 KPVFVFDG-GVPQLKKQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGV 251
+P+FVFDG P K+ S+ D + + A+ L++LFG
Sbjct: 73 RPIFVFDGPNKPAFKRNKRSSGRGDSVSIAM-------------------AKRLIRLFGF 113
Query: 252 PFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
APGEAEA+CA L+ V+++D D +FG R +N+
Sbjct: 114 TIHEAPGEAEAECAMLQQKGIVDAVLSEDVDTIMFGCRKTLRNW 157
>gi|156937484|ref|YP_001435280.1| flap endonuclease-1 [Ignicoccus hospitalis KIN4/I]
gi|166973698|sp|A8AAC1.1|FEN_IGNH4 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|156566468|gb|ABU81873.1| flap endonuclease 1 [Ignicoccus hospitalis KIN4/I]
Length = 350
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------LLERG-- 225
+HL GL++R +L IK +VFDG P+LK + I +K + + + RG
Sbjct: 59 TSHLSGLFYRTINMLENGIKVAYVFDGAPPKLKTREIERRQKLKQEAEKKYEEAVRRGDV 118
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K ++++ +T++M EA+ LL+ GVP++ AP E EAQ A + + D
Sbjct: 119 EEARKYAQMSAKLTKEMVEEAKRLLEAMGVPWVQAPSEGEAQAAYMAAKGDVWASASQDY 178
Query: 282 DIWLFGARTVYKNF 295
D LFG+ + +N
Sbjct: 179 DSLLFGSPRLVRNL 192
>gi|328354260|emb|CCA40657.1| exonuclease 1 [Komagataella pastoris CBS 7435]
Length = 567
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 15/171 (8%)
Query: 149 LISDVSIWLHQLTKGT-HDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK 207
L D WLH+ T + ++L+ G ++ + R+ L F+I P FVFDG K
Sbjct: 27 LAIDTYAWLHRATTTSWYELSHGVATKKYIQYVMKRVEMLFHFQITPYFVFDGDYLPCKA 86
Query: 208 QTISTLEKDR-------DQLLLERGKQTRL-----ASTITEQMSREAQELLQLFGVPFIV 255
+T + E R DQ L+ ++ + +T +M++ + + + F+V
Sbjct: 87 ETEAKREARRKEYRKLGDQAQLQGNRKLAMNYYQKCCDVTPEMAKALIDEFKARQISFVV 146
Query: 256 APGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNFFDKKS--HVLR 304
AP EA+AQ LE+ G+I++DSD+ +FG+R++ D+ HV R
Sbjct: 147 APYEADAQMVYLEMKGFVDGIISEDSDLLVFGSRSLITKLNDRGECIHVQR 197
>gi|159489082|ref|XP_001702526.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280548|gb|EDP06305.1| predicted protein [Chlamydomonas reinhardtii]
Length = 119
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 154 SIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT 209
SIWL Q K D G + NAHL+G + RIC+LLF +++PVFVFDG P LK+ T
Sbjct: 34 SIWLFQFMKAMRDDKGDMMRNAHLLGFFRRICRLLFHRVRPVFVFDGATPALKRHT 89
>gi|397780742|ref|YP_006545215.1| flap endonuclease-1 [Methanoculleus bourgensis MS2]
gi|396939244|emb|CCJ36499.1| flap endonuclease-1 [Methanoculleus bourgensis MS2]
Length = 333
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 12/145 (8%)
Query: 163 GTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL-- 220
GT + G +HL G+ R L IKPVFVFDG P+ K++TI + R++
Sbjct: 45 GTPLMNGAGRVTSHLSGILFRTVNFLEKGIKPVFVFDGKPPEFKQETIEQRREVRNRANE 104
Query: 221 ----------LLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ E KQ ++ I + + ELL L G+P + AP E EAQ A +
Sbjct: 105 AWKAALKEGDMEEAYKQASASTRIDRHIIESSHELLDLLGIPVVQAPSEGEAQAAHMVRS 164
Query: 271 NHTQGVITDDSDIWLFGARTVYKNF 295
++ D D LFG+ + +N
Sbjct: 165 GGVTYAVSQDYDSLLFGSPVLVRNL 189
>gi|255713324|ref|XP_002552944.1| KLTH0D05126p [Lachancea thermotolerans]
gi|317374904|sp|C5DGG4.1|FEN1_LACTC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|238934324|emb|CAR22506.1| KLTH0D05126p [Lachancea thermotolerans CBS 6340]
Length = 385
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS--------TLEKDRDQLL-LER 224
+HL+G+++R +++ IKP +VFDG P LK +S T EK ++ + E+
Sbjct: 62 TSHLMGIFYRTLRMIDNGIKPCYVFDGKPPVLKSHELSKRSARRATTEEKLKEAVEEAEK 121
Query: 225 GKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIW 284
K R +T + + EA++LL+L G+P++ AP EAEAQCA L ++D D
Sbjct: 122 LKHERRLVKVTPEHNEEAKKLLRLMGLPYVEAPCEAEAQCAELAKAGKVYAAASEDMDTL 181
Query: 285 LF 286
+
Sbjct: 182 CY 183
>gi|429217578|ref|YP_007175568.1| flap structure-specific endonuclease [Caldisphaera lagunensis DSM
15908]
gi|429134107|gb|AFZ71119.1| flap structure-specific endonuclease [Caldisphaera lagunensis DSM
15908]
Length = 351
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS-----------TLEKDRDQLLLE 223
+H+ GL++R L+ +KP++VFDG P++KK+ I +K + + +E
Sbjct: 62 SHISGLFYRTINLIEEGVKPIYVFDGKPPEMKKKEIEDRINRRQQYAEKYQKAKQEGKIE 121
Query: 224 RGKQTRLAST-ITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
K+ AST ++ +M +A++LL G+P++ AP + EAQ A + + D D
Sbjct: 122 EAKKYAQASTSLSNKMVEDAKQLLTYMGIPWVQAPADGEAQAAYMAKKGDVYATGSQDYD 181
Query: 283 IWLFGARTVYKNF 295
LFG+ + +N
Sbjct: 182 SLLFGSPKLLRNL 194
>gi|326482509|gb|EGE06519.1| hypothetical protein TEQG_05519 [Trichophyton equinum CBS 127.97]
Length = 768
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 26/148 (17%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGG-VPQLKK 207
L D+SIWL Q+ GG+ N L L+ R+ +L+ I+P+FVFDG P K+
Sbjct: 35 LAVDISIWLFQVQAAQ----GGT--NPALRTLFFRLTRLISLPIQPIFVFDGPHRPDYKR 88
Query: 208 QTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASL 267
+ + Q+ L R +L++LF P +APGEAEA+CA L
Sbjct: 89 GRLVSKNAAAAQIELSR-------------------KLIELFSYPCHMAPGEAEAECAKL 129
Query: 268 ELGNHTQGVITDDSDIWLFGARTVYKNF 295
+ V+++D D +FG++ N+
Sbjct: 130 QQAGVVDAVMSNDVDALMFGSKVTLLNY 157
>gi|354546051|emb|CCE42780.1| hypothetical protein CPAR2_204230 [Candida parapsilosis]
Length = 383
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 23/175 (13%)
Query: 131 HSMLEFRC-NIVINKLLVDLISDVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHR 183
H+ EF+ N+ K+ +D S+ L+Q G + N +HL G ++R
Sbjct: 16 HAYKEFQLKNLFGRKVAID----ASMCLYQFLIAVRQSDGQQLTNEDGETTSHLSGFFYR 71
Query: 184 ICKLLFFKIKPVFVFDGGVPQLKKQTIST-------LEKDRDQL-----LLERGKQTRLA 231
+++ IKPV+VFDG P LK + +K DQ+ + E K +
Sbjct: 72 TIRMVENNIKPVYVFDGKPPVLKGGELEKRLLRREEAQKQMDQIKDEGSVAEVMKYEKRL 131
Query: 232 STITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
+ + EA++LL+L G+P++ AP EAEAQCA L G ++D D +
Sbjct: 132 VRVGRDQNDEAKKLLELMGIPYVNAPCEAEAQCAELARGGKVYAAASEDMDTLCY 186
>gi|91773853|ref|YP_566545.1| flap endonuclease-1 [Methanococcoides burtonii DSM 6242]
gi|121684238|sp|Q12UT1.1|FEN_METBU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|91712868|gb|ABE52795.1| FEN1 flap endonuclease with 5'-3' exonuclease activity
[Methanococcoides burtonii DSM 6242]
Length = 338
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ------------LL 221
+HL G+ +R+ L+ +KP+FVFDG P K T++ + R+ L
Sbjct: 55 TSHLSGILYRLTSLIEAGVKPIFVFDGKPPDFKSDTLAKRHEVRESATAKWEDAKAQGLE 114
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K + +S +T +M ++ LL+L G+P++ AP E EAQ + + + + D
Sbjct: 115 EEAYKYAQASSKVTREMIDDSVRLLELMGIPYVKAPSEGEAQASYMVQKGDADYIGSQDY 174
Query: 282 DIWLFGARTVYKNF 295
D +LFGA V +N
Sbjct: 175 DSFLFGAPQVVRNL 188
>gi|302665075|ref|XP_003024151.1| Rad2-like endonuclease, putative [Trichophyton verrucosum HKI 0517]
gi|291188195|gb|EFE43540.1| Rad2-like endonuclease, putative [Trichophyton verrucosum HKI 0517]
Length = 768
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 26/148 (17%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGG-VPQLKK 207
L D+SIWL Q+ GG+ N L L+ R+ +L+ I+P+FVFDG P K+
Sbjct: 35 LAVDISIWLFQVQAAQ----GGA--NPALRTLFFRLTRLISLPIQPIFVFDGPHRPDYKR 88
Query: 208 QTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASL 267
+ + Q+ L R +L++LF P +APGEAEA+CA L
Sbjct: 89 GRLVSKNAAAAQIELSR-------------------KLIELFSYPCHMAPGEAEAECAKL 129
Query: 268 ELGNHTQGVITDDSDIWLFGARTVYKNF 295
+ V+++D D +FG++ N+
Sbjct: 130 QQAGVVDAVMSNDVDALMFGSKVTLLNY 157
>gi|358369087|dbj|GAA85702.1| DNA-repair protein Rad2 [Aspergillus kawachii IFO 4308]
Length = 395
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 13/156 (8%)
Query: 144 KLLVDL-ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGV 202
K+ +D +S S + ++G ++ +HL+G+++R +++ IKP++VFDG
Sbjct: 30 KVAIDASMSIYSFLIAVRSEGQQLMSDTGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAP 89
Query: 203 PQLKKQTIST--LEKDRDQLLLERGKQT----------RLASTITEQMSREAQELLQLFG 250
P+LK ++ K E K+T R +T + + E ++LL+L G
Sbjct: 90 PKLKSGELAKRFARKSEATEAHEEAKETGTAEDVEKFSRRTVRVTREHNAECKKLLKLMG 149
Query: 251 VPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
+P+I AP EAEAQCA L ++D D F
Sbjct: 150 IPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCF 185
>gi|326915480|ref|XP_003204045.1| PREDICTED: exonuclease 1-like [Meleagris gallopavo]
Length = 778
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLF-FKIKPVFVFDGGVPQLKKQTI 210
D WLH+ + G + P H + ++ +L F IKP+ VFDG KK+ +
Sbjct: 30 DAYCWLHKGSYGCAEKLARGEPTDHYVAFCMKLVDMLLSFGIKPILVFDGCTLPSKKE-V 88
Query: 211 STLEKDRDQLLLERGKQT-------------RLASTITEQMSREAQELLQLFGVPFIVAP 257
+++ Q L +GKQ + +T M+ E + + GV IVAP
Sbjct: 89 EKARREKRQANLLKGKQLFREGKFSEARDCFARSVNVTHAMAHEVIKAARARGVDCIVAP 148
Query: 258 GEAEAQCASLELGNHTQGVITDDSDIWLFGARTVY 292
EA+AQ A L Q +IT+DSD+ FG + V+
Sbjct: 149 YEADAQLAYLNKTGMVQAIITEDSDLLAFGCKKVF 183
>gi|326474338|gb|EGD98347.1| hypothetical protein TESG_05726 [Trichophyton tonsurans CBS 112818]
Length = 778
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 26/148 (17%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGG-VPQLKK 207
L D+SIWL Q+ GG+ N L L+ R+ +L+ I+P+FVFDG P K+
Sbjct: 35 LAVDISIWLFQVQAAQ----GGT--NPALRTLFFRLTRLISLPIQPIFVFDGPHRPDYKR 88
Query: 208 QTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASL 267
+ + Q+ L R +L++LF P +APGEAEA+CA L
Sbjct: 89 GRLVSKNAAAAQIELSR-------------------KLIELFSYPCHMAPGEAEAECAKL 129
Query: 268 ELGNHTQGVITDDSDIWLFGARTVYKNF 295
+ V+++D D +FG++ N+
Sbjct: 130 QQAGVVDAVMSNDVDALMFGSKVTLLNY 157
>gi|256070941|ref|XP_002571800.1| xp-G/rad2 DNA repair endonuclease family [Schistosoma mansoni]
gi|353228641|emb|CCD74812.1| putative xp-G/rad2 DNA repair endonuclease family [Schistosoma
mansoni]
Length = 991
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 228 TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFG 287
TR A + T + EAQ+LL LFG PF+V+P EAEAQC +L+ V +DDSD+W FG
Sbjct: 647 TRQAQSTTTRCISEAQDLLHLFGFPFVVSPEEAEAQCVALQRHGLVDLVASDDSDVWPFG 706
Query: 288 ARTVYKNFF 296
+ V ++ F
Sbjct: 707 VKLVCRHLF 715
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D++IWLHQ K + AGG P +L + R+CKLLFF IKPVFVFDG P LK+
Sbjct: 27 LAIDMNIWLHQAVK-SRGAAGG--PRNYLAIFFRRLCKLLFFGIKPVFVFDGETPALKRS 83
Query: 209 TISTLEKDRD 218
TI++ + R+
Sbjct: 84 TINSRRQLRN 93
>gi|150402483|ref|YP_001329777.1| flap endonuclease-1 [Methanococcus maripaludis C7]
gi|150033513|gb|ABR65626.1| XPG I [Methanococcus maripaludis C7]
Length = 324
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 12/129 (9%)
Query: 179 GLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL---LERGKQTRL----- 230
G++++ +L ++ P++VFDG LK++T K R+ L LE +Q L
Sbjct: 60 GIFYKTIYMLENEMTPIWVFDGKSHDLKEKTKEERRKSRNGALDSYLEAKEQNNLEEMQK 119
Query: 231 ----ASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
A+ + ++ +++LL+L G+P+I AP E EAQCA L N VI+ D D L+
Sbjct: 120 YAKRANFLDKKTIDNSKKLLELMGIPYINAPSEGEAQCAELVKSNDAFCVISQDYDSILY 179
Query: 287 GARTVYKNF 295
GA V KN
Sbjct: 180 GAENVVKNI 188
>gi|410924704|ref|XP_003975821.1| PREDICTED: probable flap endonuclease 1 homolog [Takifugu rubripes]
Length = 297
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS 211
D SI ++Q T L+ LIG++ R L IKPVFVFDG P K+ +
Sbjct: 34 DTSIVVNQFRAATPSLS-------PLIGVFFRALTFLEHDIKPVFVFDGRPPGEKR---A 83
Query: 212 TLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGN 271
LEK + + AS+ T R+ +LL+L GVP I APG+AEA CA L
Sbjct: 84 VLEKRAESAGWRSPNRKGTASSST----RDCLQLLKLIGVPVIQAPGDAEALCAWLVKEG 139
Query: 272 HTQGVITDDSDIWLFGARTVYKNFFDKK-SHVLRYT 306
V ++D D FGA + + KK V+ Y+
Sbjct: 140 TVDAVASEDMDTLPFGASILIRQLNSKKDGEVIEYS 175
>gi|145245469|ref|XP_001395002.1| DNA repair protein rad2 [Aspergillus niger CBS 513.88]
gi|317374885|sp|A5ABU3.1|FEN1_ASPNC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|134079702|emb|CAK97128.1| unnamed protein product [Aspergillus niger]
Length = 395
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 13/156 (8%)
Query: 144 KLLVDL-ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGV 202
K+ +D +S S + ++G ++ +HL+G+++R +++ IKP++VFDG
Sbjct: 30 KVAIDASMSIYSFLIAVRSEGQQLMSDTGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAP 89
Query: 203 PQLKKQTIST--LEKDRDQLLLERGKQT----------RLASTITEQMSREAQELLQLFG 250
P+LK ++ K E K+T R +T + + E ++LL+L G
Sbjct: 90 PKLKSGELAKRFARKSEATEAHEEAKETGTAEDVEKFSRRTVRVTREHNAECKKLLKLMG 149
Query: 251 VPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
+P+I AP EAEAQCA L ++D D F
Sbjct: 150 IPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCF 185
>gi|393213357|gb|EJC98853.1| PIN domain-like protein [Fomitiporia mediterranea MF3/22]
Length = 403
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS------------TLEKDRDQLL 221
+HL+G ++R +++ IKP +VFDG P LK ++ E
Sbjct: 62 TSHLMGFFYRTIRIVENGIKPAYVFDGKPPDLKSGVLAKRFERREEAKEEGEEAKETGTA 121
Query: 222 LERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
+ + TR +T++ + E ++LL L G+P +VAP EAEAQCA L G ++D
Sbjct: 122 EDMERFTRRQVKVTKEHNEECRKLLGLMGIPVVVAPSEAEAQCAELARGGKVYAAGSEDM 181
Query: 282 DIWLFGARTVYKNF 295
D F A +Y++
Sbjct: 182 DTLTFNAPILYRHL 195
>gi|435850378|ref|YP_007311964.1| flap structure-specific endonuclease [Methanomethylovorans
hollandica DSM 15978]
gi|433661008|gb|AGB48434.1| flap structure-specific endonuclease [Methanomethylovorans
hollandica DSM 15978]
Length = 338
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLL--ERGKQTRLA 231
+HL G+ +R+ L+ IKPVFVFDG LK +TI DR++ + E K LA
Sbjct: 55 TSHLSGILYRMTSLMEEGIKPVFVFDGKPSHLKARTIEKRTADREKATIKWEEAKSKGLA 114
Query: 232 ----------STITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
S +T ++ ++++LL G+P++ AP E E+Q A + V + D
Sbjct: 115 EEAYMYAQASSRVTHEIVEDSRKLLVAMGIPWVDAPSEGESQAAHMVKRGDANYVASQDY 174
Query: 282 DIWLFGARTVYKNF 295
D LFGA V +N
Sbjct: 175 DSLLFGASFVVRNL 188
>gi|350631707|gb|EHA20078.1| hypothetical protein ASPNIDRAFT_48158 [Aspergillus niger ATCC 1015]
Length = 359
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 12/149 (8%)
Query: 150 ISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQT 209
+S S + ++G ++ +HL+G+++R +++ IKP++VFDG P+LK
Sbjct: 1 MSIYSFLIAVRSEGQQLMSDTGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGE 60
Query: 210 IST--LEKDRDQLLLERGKQT----------RLASTITEQMSREAQELLQLFGVPFIVAP 257
++ K E K+T R +T + + E ++LL+L G+P+I AP
Sbjct: 61 LAKRFARKSEATEAHEEAKETGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYIDAP 120
Query: 258 GEAEAQCASLELGNHTQGVITDDSDIWLF 286
EAEAQCA L ++D D F
Sbjct: 121 TEAEAQCAVLARAGKVYAAASEDMDTLCF 149
>gi|315055715|ref|XP_003177232.1| hypothetical protein MGYG_01313 [Arthroderma gypseum CBS 118893]
gi|311339078|gb|EFQ98280.1| hypothetical protein MGYG_01313 [Arthroderma gypseum CBS 118893]
Length = 765
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 26/145 (17%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGG-VPQLKKQTI 210
D+SIWL Q+ GG+ N L L+ R+ +L+ I+P+FVFDG P K+ +
Sbjct: 38 DISIWLFQVQAAQ----GGA--NPALRTLFFRLTRLISLPIQPIFVFDGPHRPDYKRGRL 91
Query: 211 STLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELG 270
+ Q+ L R +L++LF P VAPGEAEA+CA L+
Sbjct: 92 VSKNAAAAQIDLSR-------------------KLIELFSYPCHVAPGEAEAECAKLQRT 132
Query: 271 NHTQGVITDDSDIWLFGARTVYKNF 295
V+++D D +FG++ N+
Sbjct: 133 GVVDAVMSNDVDALMFGSKVTLLNY 157
>gi|168014475|ref|XP_001759777.1| predicted protein [Physcomitrella patens subsp. patens]
gi|317374864|sp|A9S0B8.1|FEN11_PHYPA RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A
gi|162688907|gb|EDQ75281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 394
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 12/149 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIS---TLEKDRDQLLL---ERG-- 225
+HL G+++R ++L +KPV+VFDG P LKK+ ++ +D + L+ E G
Sbjct: 62 TSHLQGMFNRTIRVLEAGLKPVYVFDGQPPDLKKRELAKRFARREDAAEDLVTAKETGNE 121
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
K ++ +T+Q + + ++LL+L GVP + AP EAEA+CASL V ++D
Sbjct: 122 ADVEKYSKKTVKVTKQHNEDCRKLLRLMGVPVVEAPSEAEAECASLCKAEKVFAVASEDM 181
Query: 282 DIWLFGARTVYKNFFDKKSHVLRYTAPDI 310
D +G+ ++ + S L DI
Sbjct: 182 DSLTYGSTRFLRHLMEPTSRKLPVLEFDI 210
>gi|367003685|ref|XP_003686576.1| hypothetical protein TPHA_0G03010 [Tetrapisispora phaffii CBS 4417]
gi|357524877|emb|CCE64142.1| hypothetical protein TPHA_0G03010 [Tetrapisispora phaffii CBS 4417]
Length = 380
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 15/150 (10%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q GG + N +HL+G+++R +++ IKP +VFDG P L
Sbjct: 34 DASMSLYQFLIAVRQQDGGQLTNENGETTSHLMGIFYRTLRMIDNGIKPCYVFDGKPPVL 93
Query: 206 K-----KQTISTLEKDRDQL-LLERG---KQTRLASTITEQMSREAQELLQLFGVPFIVA 256
K K+T +E ++ +E+ KQ + ++++ + EA+ LL+L G+P++ A
Sbjct: 94 KSHELTKRTARRVETEKKLAEAVEQADILKQEKRLVKVSKEHNDEAKHLLELMGIPYVNA 153
Query: 257 PGEAEAQCASLELGNHTQGVITDDSDIWLF 286
P EAE+QCA L ++D D +
Sbjct: 154 PCEAESQCAELAKKGKVYAAASEDMDTLCY 183
>gi|350634861|gb|EHA23223.1| 5'-3' exonuclease [Aspergillus niger ATCC 1015]
Length = 543
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 147 VDLISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLK 206
+ + D+SIWL Q+ G GG N L L++R+ K+L I P+FV+DG
Sbjct: 28 IRIAVDISIWLFQVQAGR----GGR--NPELRTLFYRLLKILALPIHPLFVYDG------ 75
Query: 207 KQTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCAS 266
+++ +RGK S + R ++ L+ LF P APGEAEA+CA
Sbjct: 76 ----------KNKPPFKRGKAVSSRSYGNAPIIRLSKILVDLFKFPRHEAPGEAEAECAR 125
Query: 267 LELGNHTQGVITDDSDIWLFGARTVYKNF 295
L+ V+T+D D +FG+ F
Sbjct: 126 LQRAGVVDAVMTNDVDALMFGSTFTVMGF 154
>gi|257077017|ref|ZP_05571378.1| flap endonuclease-1 [Ferroplasma acidarmanus fer1]
Length = 339
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQ------LLLERGKQT 228
+HL G+++R LL IKPV+ FDG +LK +T+ + +++ L +E
Sbjct: 56 SHLSGIFYRTATLLENNIKPVYSFDGKPYRLKDETLKERKAIKEKNIAELNLAMENKDAE 115
Query: 229 RLAS------TITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
++ + IT + E+++LL + GVP++ AP E EAQ + + VI+ D D
Sbjct: 116 KIKTLSSRINYITADIVSESKKLLDMMGVPWVQAPSEGEAQASYMSKVGAVDSVISQDYD 175
Query: 283 IWLFGARTVYKNF 295
L GAR V +NF
Sbjct: 176 CLLLGARRVLRNF 188
>gi|344233741|gb|EGV65611.1| PIN domain-like protein [Candida tenuis ATCC 10573]
Length = 376
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 18/153 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q G ++ N +HL G+++R +++ IKPV+VFDG P L
Sbjct: 34 DASMCLYQYLIAVRQGDGQNLTNDKGEITSHLSGMFYRTLRMVENGIKPVYVFDGKPPVL 93
Query: 206 KKQTIST--LEKDRDQLLLERGKQTRLASTITE------QMSRE----AQELLQLFGVPF 253
K + L K+ +E K+ A I + ++SRE A++LL+L G+P+
Sbjct: 94 KGGELEKRYLRKEEAIKKMEDAKEEGSAEDILKFEKRMVRVSREHNDEAKKLLELMGIPY 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
I AP EAEAQCA L G ++D D +
Sbjct: 154 INAPCEAEAQCAELARGGKVFAAASEDMDTICY 186
>gi|241958594|ref|XP_002422016.1| structure-specific endonuclease, putative [Candida dubliniensis
CD36]
gi|317374881|sp|B9WLQ5.1|FEN1_CANDC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|223645361|emb|CAX40017.1| structure-specific endonuclease, putative [Candida dubliniensis
CD36]
Length = 372
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 18/153 (11%)
Query: 152 DVSIWLHQLTKGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGVPQL 205
D S+ L+Q G + N +HL G+++R K++ IKPV+VFDG P L
Sbjct: 34 DASMCLYQFLIAVRQSDGQQLTNEDGETTSHLSGMFYRTIKMVENNIKPVYVFDGKPPVL 93
Query: 206 K-----KQTISTLEKDRDQLLL-------ERGKQTRLASTITEQMSREAQELLQLFGVPF 253
K K+ + E + + L E K + +T + + EA++LL+L G+P
Sbjct: 94 KGGELEKRLLRREEAQKQKTALGDEGTVEEVLKFEKRLVRVTREQNEEAKKLLELMGIPC 153
Query: 254 IVAPGEAEAQCASLELGNHTQGVITDDSDIWLF 286
+ AP EAEAQCA L G ++D D +
Sbjct: 154 VDAPCEAEAQCAELARGGKVYAAASEDMDTLCY 186
>gi|126465621|ref|YP_001040730.1| flap endonuclease-1 [Staphylothermus marinus F1]
gi|166973707|sp|A3DMG2.1|FEN_STAMF RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|126014444|gb|ABN69822.1| flap endonuclease 1 [Staphylothermus marinus F1]
Length = 350
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRD------QLLLERG-- 225
+HL GL++R +L IKP +VFDG P++K + I K R+ + L +G
Sbjct: 59 TSHLSGLFYRTINILENGIKPAYVFDGKPPEIKAKEIEKRRKIREDASKKYEEALRKGDI 118
Query: 226 ----KQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
+ +++ +T++M ++A++LL G+P+I AP E EAQ A + + D
Sbjct: 119 EAARRYAMMSAKLTDEMVQDAKKLLDAMGIPWIQAPAEGEAQAAYIVSKGDAWASASQDY 178
Query: 282 DIWLFGARTVYKNF 295
D LFG+ + +N
Sbjct: 179 DSLLFGSPRLIRNL 192
>gi|343471550|emb|CCD16055.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 492
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 17/153 (11%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLL--LERGKQ---- 227
+HL G++ R +++ ++P++VFDG P LK + + + ++ E+ K+
Sbjct: 105 TSHLNGIFFRTLRMIDEGLRPIYVFDGKPPSLKNSELDSRRQRAEEAKHEYEKAKEEGDD 164
Query: 228 -------TRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDD 280
R+ EQM E + LLQL G+P + AP EAEAQCA L + V T+D
Sbjct: 165 EAMEKMSKRMVRVSREQMD-EVKTLLQLMGIPVVQAPSEAEAQCAELVRKDKAWAVGTED 223
Query: 281 SDIWLFGARTVYKNFF---DKKSHVLRYTAPDI 310
D FGAR + ++ KK + Y DI
Sbjct: 224 MDALAFGARVMLRHLTYGEAKKRPIAEYHLEDI 256
>gi|307106788|gb|EFN55033.1| hypothetical protein CHLNCDRAFT_15549, partial [Chlorella
variabilis]
Length = 87
Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 40/61 (65%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQ 208
L D SIWL Q + D G + NAH++G + RI KLL+ +I+PVFVFDG P LKKQ
Sbjct: 27 LAVDASIWLFQFIQAMRDERGELIRNAHVLGFFRRITKLLYHRIRPVFVFDGATPALKKQ 86
Query: 209 T 209
T
Sbjct: 87 T 87
>gi|327307022|ref|XP_003238202.1| hypothetical protein TERG_00194 [Trichophyton rubrum CBS 118892]
gi|326458458|gb|EGD83911.1| hypothetical protein TERG_00194 [Trichophyton rubrum CBS 118892]
Length = 768
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 26/148 (17%)
Query: 149 LISDVSIWLHQLTKGTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGG-VPQLKK 207
L D+SIWL Q+ GG+ N L L+ R+ +L+ I+P+FVFDG P K+
Sbjct: 35 LAVDISIWLFQVQAAQ----GGA--NPALRTLFFRLTRLISLPIQPIFVFDGPHRPDYKR 88
Query: 208 QTISTLEKDRDQLLLERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASL 267
+ Q+ L R +L++LF P +APGEAEA+CA L
Sbjct: 89 GRLVNKNAAAAQIELSR-------------------KLIELFSYPCHMAPGEAEAECAKL 129
Query: 268 ELGNHTQGVITDDSDIWLFGARTVYKNF 295
+ V+++D D +FG++ N+
Sbjct: 130 QQAGVVDAVMSNDVDALMFGSKVTLLNY 157
>gi|359417810|ref|ZP_09209878.1| flap endonuclease-1, partial [Candidatus Haloredivivus sp. G17]
gi|358031834|gb|EHK00670.1| flap endonuclease-1 [Candidatus Haloredivivus sp. G17]
Length = 296
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 12/139 (8%)
Query: 175 AHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL------------LL 222
+HL GL++R LL I+PV+VFDG +P LK++ + K R++ +
Sbjct: 13 SHLSGLFYRNINLLEKDIRPVYVFDGAIPDLKQKETTERRKKREEAKKEWEKLKEEGKIS 72
Query: 223 ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSD 282
E + +S +T M E++ELL G+P+I A E EAQ A + V + D D
Sbjct: 73 EAYSKATQSSKLTGDMIEESKELLDAMGIPYIQASSEGEAQAAFMSSEGDVYAVGSQDWD 132
Query: 283 IWLFGARTVYKNFFDKKSH 301
LFGA + +N +K+
Sbjct: 133 CMLFGADRMVRNLTSRKTR 151
>gi|332796311|ref|YP_004457811.1| XPG I domain-containing protein [Acidianus hospitalis W1]
gi|332694046|gb|AEE93513.1| XPG I domain protein [Acidianus hospitalis W1]
Length = 344
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 18/137 (13%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQLLL----------- 222
+HL G+++R LL + P++VFDG P+LK Q LE+ R
Sbjct: 50 TSHLSGIFYRTISLLEEGVIPIYVFDGKPPELKAQE---LERRRKIKEEAEKKLEKAKEE 106
Query: 223 ----ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVIT 278
E K +++A+ +T M+ E + LL+ G+P + AP E EA+ A L +T +
Sbjct: 107 GETKELKKYSQMATRLTNDMAEEGKRLLEAMGIPVVQAPSEGEAEAAYLCSQGYTWAAAS 166
Query: 279 DDSDIWLFGARTVYKNF 295
D D LFGA + +N
Sbjct: 167 QDYDSLLFGANKLIRNL 183
>gi|324514356|gb|ADY45841.1| Flap endonuclease 1-B [Ascaris suum]
Length = 320
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 16/132 (12%)
Query: 178 IGLYHRICKLLFFKIKPVFVFDGGVPQLK-----KQTISTLEKDR---------DQLLLE 223
+G+++R +++ IKPV+VFDG P++K K+T +E ++ D + +E
Sbjct: 1 MGMFYRTVRMITNGIKPVYVFDGKPPEMKCEELEKRTERRVEAEKQLAEAKEKGDAMAVE 60
Query: 224 RGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDI 283
K R +T+ + EA++LL+L GVP AP EAEAQCA L T+D D
Sbjct: 61 --KFERRLVKVTKDQNEEAKKLLRLMGVPVFDAPCEAEAQCAELVRAGKVFAAATEDMDA 118
Query: 284 WLFGARTVYKNF 295
FG++ + +
Sbjct: 119 LAFGSKRLLRQL 130
>gi|240273940|gb|EER37459.1| DNA repair protein RAD2 [Ajellomyces capsulatus H143]
Length = 519
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIST--LEKDRDQLLL--------- 222
+HL+G+++R +++ IKPV+VFDG P+LK ++ + K
Sbjct: 185 TSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFMRKSEAAEAHEEAKEVGTA 244
Query: 223 -ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K +R +T + + E ++LL+L GVP+I AP EAEAQCA L ++D
Sbjct: 245 EEVEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASEDM 304
Query: 282 DIWLF 286
D F
Sbjct: 305 DTLCF 309
>gi|322708110|gb|EFY99687.1| exonuclease, putative [Metarhizium anisopliae ARSEF 23]
Length = 751
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 13/154 (8%)
Query: 149 LISDVSIWLHQLTKGTH-DLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKK 207
L D WLH+ +L G ++ HR+ L F + P VFDG K
Sbjct: 27 LAVDAYGWLHRAAYSCAVELGRGKPTKRYVNAAMHRVRMLQHFGVTPYMVFDGDFLPSKA 86
Query: 208 QTISTLEKDRDQL------LLERGKQTRLAST------ITEQMSREAQELLQLFGVPFIV 255
T + K R++ LL+ GK ++ A +T +M+ + L+ G+P++V
Sbjct: 87 ATEDSRAKRREEKKKLANDLLKAGKTSQAAQEFQKCIDVTPEMASTLIQELKQMGIPYVV 146
Query: 256 APGEAEAQCASLELGNHTQGVITDDSDIWLFGAR 289
AP EA+AQ LE G+I+DDSD+ +FGA+
Sbjct: 147 APYEADAQLVYLERQGLVNGIISDDSDLLVFGAK 180
>gi|146090657|ref|XP_001466297.1| putative flap endonuclease-1 (FEN-1) [Leishmania infantum JPCM5]
gi|398017392|ref|XP_003861883.1| flap endonuclease-1 (FEN-1), putative [Leishmania donovani]
gi|317374906|sp|A4I2L4.1|FEN1_LEIIN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|134070659|emb|CAM69008.1| putative flap endonuclease-1 (FEN-1) [Leishmania infantum JPCM5]
gi|322500111|emb|CBZ35186.1| flap endonuclease-1 (FEN-1), putative [Leishmania donovani]
Length = 395
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 25/167 (14%)
Query: 152 DVSIWLHQLT---KGTHDLAGGSVPN------AHLIGLYHRICKLLFFKIKPVFVFDGGV 202
D S+ ++Q KG D G + N +HL GL+ R +++ IKP++VFDG
Sbjct: 34 DASMSIYQFIIAMKGFQDGQGLELTNEKGDVTSHLNGLFARTLRMIDEGIKPIYVFDGKP 93
Query: 203 PQLK-------KQTISTLEKD-------RDQLLLERGKQTRLASTITEQMSREAQELLQL 248
P+LK +Q + E++ D ++E K ++ ++ E+++LL+L
Sbjct: 94 PKLKADELEMRRQKAAEAEREFEKAKDAGDDEMME--KMSKRTVRVSRDQIDESKKLLRL 151
Query: 249 FGVPFIVAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTVYKNF 295
G+P I AP EAEAQCA L V T+D D FG+ + ++
Sbjct: 152 MGIPVIQAPSEAEAQCAELVKKGKAWAVGTEDMDALTFGSTVMLRHL 198
>gi|386001444|ref|YP_005919743.1| FLAP endonuclease [Methanosaeta harundinacea 6Ac]
gi|357209500|gb|AET64120.1| FLAP endonuclease [Methanosaeta harundinacea 6Ac]
Length = 336
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 163 GTHDLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTISTLEKDRDQL-- 220
GT G +HL G+ +R+ LL K VFVFDG P+ K++T+ + R +
Sbjct: 44 GTPLRDGSGRTTSHLSGILYRMTNLLEAGAKVVFVFDGEPPRFKRETLDQRAETRSRAEE 103
Query: 221 LLERGKQTRL--------ASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNH 272
+ +R K+ L AS + ++M +A LL+ G+P + AP E EAQ A + +
Sbjct: 104 MWQRAKEEGLDGFKYAQAASRLEDEMIADAMRLLEAMGIPAVQAPSEGEAQAAFMAIKGD 163
Query: 273 TQGVITDDSDIWLFGARTVYKNF 295
V + D D LFGA V +N
Sbjct: 164 VDLVGSQDYDALLFGAPRVVRNM 186
>gi|325094624|gb|EGC47934.1| DNA repair protein RAD2 [Ajellomyces capsulatus H88]
Length = 359
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIST--LEKDRDQLLL--------- 222
+HL+G+++R +++ IKPV+VFDG P+LK ++ + K
Sbjct: 25 TSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFMRKSEAAEAHEEAKEVGTA 84
Query: 223 -ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K +R +T + + E ++LL+L GVP+I AP EAEAQCA L ++D
Sbjct: 85 EEVEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASEDM 144
Query: 282 DIWLF 286
D F
Sbjct: 145 DTLCF 149
>gi|154286840|ref|XP_001544215.1| flap endonuclease [Ajellomyces capsulatus NAm1]
gi|317374874|sp|A6QV55.1|FEN1_AJECN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|150407856|gb|EDN03397.1| flap endonuclease [Ajellomyces capsulatus NAm1]
Length = 395
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 12/125 (9%)
Query: 174 NAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTIST--LEKDRDQLLL--------- 222
+HL+G+++R +++ IKPV+VFDG P+LK ++ + K
Sbjct: 61 TSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFMRKSEAAEAHEEAKEVGTA 120
Query: 223 -ERGKQTRLASTITEQMSREAQELLQLFGVPFIVAPGEAEAQCASLELGNHTQGVITDDS 281
E K +R +T + + E ++LL+L GVP+I AP EAEAQCA L ++D
Sbjct: 121 EEVEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASEDM 180
Query: 282 DIWLF 286
D F
Sbjct: 181 DTLCF 185
>gi|452978258|gb|EME78022.1| hypothetical protein MYCFIDRAFT_116032, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 527
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 21/157 (13%)
Query: 152 DVSIWLHQLTKGTH-DLAGGSVPNAHLIGLYHRICKLLFFKIKPVFVFDGGVPQLKKQTI 210
D WLH+ T DLA G+ H+ HR+ L+ F +KP VFDG K T
Sbjct: 26 DAYGWLHRGTVSCAIDLAEGNPTRKHIDFALHRVRMLIHFGVKPYLVFDGDYLPSKAHT- 84
Query: 211 STLEKDR------------DQLLLERGKQTRL----ASTITEQMSREAQELLQLFGVPFI 254
EK+R + L + R Q +L A +T M+RE E L+ V ++
Sbjct: 85 ---EKERAAKRKESKRVGLEMLRMGRPSQAQLELQKAVDVTPAMARELIEELKKLDVQYV 141
Query: 255 VAPGEAEAQCASLELGNHTQGVITDDSDIWLFGARTV 291
VAP EA++Q A LE GVI++DSD+ +FG + +
Sbjct: 142 VAPYEADSQMAYLEKKGIIDGVISEDSDLLVFGVQCL 178
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,921,006,027
Number of Sequences: 23463169
Number of extensions: 204277107
Number of successful extensions: 716425
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1895
Number of HSP's successfully gapped in prelim test: 178
Number of HSP's that attempted gapping in prelim test: 712099
Number of HSP's gapped (non-prelim): 2891
length of query: 314
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 172
effective length of database: 9,027,425,369
effective search space: 1552717163468
effective search space used: 1552717163468
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)