Query psy14299
Match_columns 448
No_of_seqs 219 out of 1577
Neff 8.1
Searched_HMMs 46136
Date Fri Aug 16 16:17:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14299.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14299hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0629|consensus 100.0 6.2E-55 1.4E-59 422.7 24.2 349 3-435 160-509 (510)
2 PLN02590 probable tyrosine dec 100.0 1.5E-53 3.2E-58 444.9 36.1 340 3-439 195-536 (539)
3 PLN02880 tyrosine decarboxylas 100.0 2.9E-51 6.3E-56 427.1 35.4 339 3-438 147-487 (490)
4 TIGR03799 NOD_PanD_pyr putativ 100.0 3.4E-47 7.3E-52 397.5 36.0 337 3-428 160-518 (522)
5 PF00282 Pyridoxal_deC: Pyrido 100.0 1.6E-44 3.5E-49 364.9 23.6 269 3-356 104-372 (373)
6 KOG0628|consensus 100.0 6.4E-41 1.4E-45 328.7 26.4 330 2-437 139-473 (511)
7 PLN02263 serine decarboxylase 100.0 1.8E-39 3.8E-44 331.4 31.4 286 3-436 153-444 (470)
8 TIGR01788 Glu-decarb-GAD gluta 100.0 2.8E-39 6.1E-44 331.6 31.6 315 3-436 102-430 (431)
9 TIGR03811 tyr_de_CO2_Ent tyros 100.0 3.2E-38 6.9E-43 332.7 36.3 340 3-435 141-602 (608)
10 PLN03032 serine decarboxylase; 100.0 1.5E-37 3.3E-42 312.6 30.5 282 3-432 86-373 (374)
11 COG0076 GadB Glutamate decarbo 100.0 4.7E-38 1E-42 323.4 27.3 328 2-436 119-450 (460)
12 PRK02769 histidine decarboxyla 100.0 2E-36 4.4E-41 306.4 32.3 284 3-435 85-372 (380)
13 COG0520 csdA Selenocysteine ly 100.0 9.9E-36 2.1E-40 302.8 30.4 305 4-434 86-404 (405)
14 cd06450 DOPA_deC_like DOPA dec 100.0 1.4E-34 3.1E-39 290.1 28.2 287 3-431 58-344 (345)
15 COG1104 NifS Cysteine sulfinat 100.0 8.1E-31 1.7E-35 258.6 27.4 297 4-440 63-382 (386)
16 PRK09295 bifunctional cysteine 100.0 8.6E-29 1.9E-33 254.2 30.6 305 4-434 87-403 (406)
17 PRK13520 L-tyrosine decarboxyl 100.0 9.8E-29 2.1E-33 250.3 30.0 291 4-434 78-370 (371)
18 TIGR03392 FeS_syn_CsdA cystein 100.0 2.2E-28 4.9E-33 250.4 30.9 305 4-436 80-396 (398)
19 PRK10874 cysteine sulfinate de 100.0 2.6E-28 5.7E-33 250.2 31.3 305 4-436 83-399 (401)
20 TIGR03812 tyr_de_CO2_Arch tyro 100.0 3.6E-28 7.9E-33 246.4 30.2 292 3-432 77-373 (373)
21 TIGR01977 am_tr_V_EF2568 cyste 100.0 5.1E-28 1.1E-32 245.6 30.5 295 4-431 64-375 (376)
22 TIGR03402 FeS_nifS cysteine de 100.0 8.7E-28 1.9E-32 244.4 31.5 290 4-437 61-374 (379)
23 TIGR01979 sufS cysteine desulf 100.0 1.1E-27 2.3E-32 245.7 31.9 303 4-436 82-402 (403)
24 PLN02855 Bifunctional selenocy 100.0 2.2E-27 4.8E-32 245.1 31.6 305 4-436 96-419 (424)
25 PF00266 Aminotran_5: Aminotra 100.0 6.4E-28 1.4E-32 244.8 26.0 295 3-425 62-371 (371)
26 PLN02651 cysteine desulfurase 100.0 1.6E-27 3.4E-32 241.4 28.0 281 4-423 62-364 (364)
27 TIGR01814 kynureninase kynuren 100.0 1.1E-26 2.4E-31 238.6 32.6 300 4-433 88-405 (406)
28 TIGR03403 nifS_epsilon cystein 100.0 7.8E-27 1.7E-31 237.8 31.1 293 4-437 62-377 (382)
29 cd06453 SufS_like Cysteine des 100.0 2.2E-26 4.8E-31 233.4 30.9 297 4-429 63-373 (373)
30 TIGR02006 IscS cysteine desulf 100.0 4.7E-26 1E-30 233.6 31.4 292 4-437 66-379 (402)
31 cd06451 AGAT_like Alanine-glyo 99.9 1.2E-25 2.6E-30 226.6 27.9 294 5-433 53-355 (356)
32 PLN02409 serine--glyoxylate am 99.9 2E-25 4.3E-30 228.9 29.1 303 4-437 62-374 (401)
33 TIGR02326 transamin_PhnW 2-ami 99.9 1.6E-25 3.6E-30 226.4 27.9 298 4-433 56-360 (363)
34 COG0075 Serine-pyruvate aminot 99.9 2.4E-25 5.3E-30 221.4 26.8 301 5-438 59-366 (383)
35 PRK02948 cysteine desulfurase; 99.9 4.1E-25 9E-30 224.9 28.3 295 4-438 62-377 (381)
36 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.3E-24 2.8E-29 222.3 29.9 287 4-429 79-397 (397)
37 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 3.1E-24 6.8E-29 219.1 31.5 158 4-185 80-240 (387)
38 PRK14012 cysteine desulfurase; 99.9 4.8E-24 1E-28 218.9 29.5 152 4-181 68-222 (404)
39 PLN02414 glycine dehydrogenase 99.9 6.3E-24 1.4E-28 234.1 32.2 315 4-438 585-910 (993)
40 PRK04366 glycine dehydrogenase 99.9 3.5E-24 7.7E-29 224.1 28.8 314 5-438 132-451 (481)
41 PRK05367 glycine dehydrogenase 99.9 6.8E-24 1.5E-28 234.7 31.4 310 5-438 561-878 (954)
42 TIGR00461 gcvP glycine dehydro 99.9 8.1E-24 1.7E-28 230.6 30.9 316 1-438 545-870 (939)
43 PLN02724 Molybdenum cofactor s 99.9 1.8E-24 3.8E-29 238.9 25.8 313 4-433 99-486 (805)
44 PRK13479 2-aminoethylphosphona 99.9 1.4E-23 3.1E-28 212.6 28.0 300 5-437 59-365 (368)
45 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 3.5E-23 7.6E-28 208.0 27.7 298 4-432 52-354 (355)
46 PTZ00094 serine hydroxymethylt 99.9 1.3E-23 2.8E-28 218.6 25.3 288 9-435 107-408 (452)
47 KOG1549|consensus 99.9 7.9E-24 1.7E-28 209.9 22.0 154 4-179 104-257 (428)
48 cd00613 GDC-P Glycine cleavage 99.9 2.9E-23 6.3E-28 212.4 25.5 308 4-429 83-398 (398)
49 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 3E-22 6.5E-27 202.5 31.9 158 4-185 61-221 (361)
50 PRK03080 phosphoserine aminotr 99.9 2.3E-23 5E-28 212.0 22.8 301 4-437 68-375 (378)
51 PRK00451 glycine dehydrogenase 99.9 1.1E-22 2.4E-27 211.6 25.1 304 4-433 131-446 (447)
52 TIGR03235 DNA_S_dndA cysteine 99.9 2.7E-22 5.9E-27 202.1 27.1 156 4-181 61-216 (353)
53 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.5E-21 3.2E-26 198.2 31.1 159 4-186 68-229 (370)
54 KOG1383|consensus 99.9 2.6E-22 5.6E-27 198.5 22.4 303 3-439 139-450 (491)
55 TIGR01822 2am3keto_CoA 2-amino 99.9 3.2E-21 6.9E-26 197.1 29.1 288 4-436 100-390 (393)
56 TIGR03531 selenium_SpcS O-phos 99.9 8.9E-22 1.9E-26 201.7 25.0 164 4-186 125-295 (444)
57 COG0156 BioF 7-keto-8-aminopel 99.9 2.4E-21 5.2E-26 194.5 26.1 279 4-432 101-387 (388)
58 PRK12566 glycine dehydrogenase 99.9 4.1E-21 8.8E-26 208.3 29.4 317 2-439 559-880 (954)
59 PRK07179 hypothetical protein; 99.9 3.8E-21 8.2E-26 197.6 27.7 280 4-437 116-400 (407)
60 COG2008 GLY1 Threonine aldolas 99.9 4E-22 8.6E-27 193.3 18.6 287 3-433 51-341 (342)
61 TIGR01364 serC_1 phosphoserine 99.9 5E-22 1.1E-26 199.7 19.6 283 4-435 57-348 (349)
62 PLN02721 threonine aldolase 99.9 3E-21 6.4E-26 194.1 24.4 285 5-434 58-351 (353)
63 cd00611 PSAT_like Phosphoserin 99.9 5E-22 1.1E-26 200.5 18.3 284 4-433 64-354 (355)
64 PRK05355 3-phosphoserine/phosp 99.9 7.5E-22 1.6E-26 199.3 18.6 283 4-435 68-358 (360)
65 PRK05937 8-amino-7-oxononanoat 99.9 2.5E-20 5.4E-25 189.2 28.3 278 5-438 74-353 (370)
66 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.5E-20 3.3E-25 188.8 24.5 150 4-184 35-187 (352)
67 PLN03226 serine hydroxymethylt 99.9 2.2E-20 4.7E-25 194.5 26.0 299 8-435 106-419 (475)
68 TIGR01366 serC_3 phosphoserine 99.9 7.2E-21 1.6E-25 192.4 21.8 288 4-435 61-360 (361)
69 cd06454 KBL_like KBL_like; thi 99.9 7.9E-20 1.7E-24 183.3 28.1 282 5-432 64-348 (349)
70 TIGR01821 5aminolev_synth 5-am 99.9 2.1E-19 4.6E-24 184.3 30.0 287 4-437 107-398 (402)
71 PRK13580 serine hydroxymethylt 99.9 5.3E-20 1.1E-24 189.1 25.0 244 66-436 194-446 (493)
72 KOG1368|consensus 99.9 9E-21 2E-25 177.7 16.4 285 4-434 73-368 (384)
73 cd06502 TA_like Low-specificit 99.9 3E-20 6.4E-25 185.7 21.0 160 4-184 49-214 (338)
74 PRK13392 5-aminolevulinate syn 99.8 5.9E-19 1.3E-23 181.6 29.0 288 4-437 108-399 (410)
75 TIGR01437 selA_rel uncharacter 99.8 4.4E-19 9.6E-24 179.5 27.5 154 4-179 62-223 (363)
76 PRK13034 serine hydroxymethylt 99.8 1.9E-19 4.1E-24 185.4 25.0 286 6-435 94-392 (416)
77 PRK09064 5-aminolevulinate syn 99.8 8.9E-19 1.9E-23 180.0 29.9 288 4-437 108-399 (407)
78 cd00609 AAT_like Aspartate ami 99.8 3.2E-19 6.9E-24 178.0 24.9 159 3-184 60-225 (350)
79 KOG2862|consensus 99.8 5.5E-19 1.2E-23 166.7 24.3 282 39-435 91-382 (385)
80 PRK13393 5-aminolevulinate syn 99.8 2.5E-18 5.3E-23 176.8 29.4 285 4-437 107-398 (406)
81 PRK06939 2-amino-3-ketobutyrat 99.8 2.4E-18 5.3E-23 175.7 29.2 287 5-436 105-394 (397)
82 PRK05958 8-amino-7-oxononanoat 99.8 2.6E-18 5.7E-23 174.6 28.6 280 4-432 101-384 (385)
83 COG1103 Archaea-specific pyrid 99.8 1.9E-18 4.1E-23 160.2 24.4 299 5-436 79-381 (382)
84 cd00378 SHMT Serine-glycine hy 99.8 5.5E-19 1.2E-23 181.2 22.8 285 6-436 85-386 (402)
85 PLN02483 serine palmitoyltrans 99.8 3.8E-18 8.2E-23 178.9 29.4 290 5-437 164-468 (489)
86 COG0436 Aspartate/tyrosine/aro 99.8 2.5E-18 5.3E-23 175.4 27.1 289 4-435 91-391 (393)
87 PLN02822 serine palmitoyltrans 99.8 1.1E-17 2.5E-22 175.0 31.8 295 5-436 173-478 (481)
88 PLN02955 8-amino-7-oxononanoat 99.8 6.1E-18 1.3E-22 173.7 28.5 291 4-437 164-463 (476)
89 PRK00011 glyA serine hydroxyme 99.8 1.3E-18 2.8E-23 179.4 22.8 288 6-435 91-389 (416)
90 PRK08361 aspartate aminotransf 99.8 5.4E-18 1.2E-22 173.4 26.6 152 4-179 95-253 (391)
91 TIGR00858 bioF 8-amino-7-oxono 99.8 1E-17 2.2E-22 168.6 27.3 279 4-430 78-360 (360)
92 TIGR01825 gly_Cac_T_rel pyrido 99.8 1.8E-17 3.9E-22 168.8 28.5 284 5-436 96-382 (385)
93 PRK15029 arginine decarboxylas 99.8 6.1E-18 1.3E-22 182.4 26.0 158 4-180 223-402 (755)
94 cd00615 Orn_deC_like Ornithine 99.8 3.7E-19 7.9E-24 175.1 14.6 153 5-180 78-236 (294)
95 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 9.5E-19 2.1E-23 176.9 17.9 157 4-181 84-257 (417)
96 TIGR01141 hisC histidinol-phos 99.8 2.2E-17 4.7E-22 165.9 26.0 271 4-430 73-346 (346)
97 PRK05367 glycine dehydrogenase 99.8 1.5E-17 3.2E-22 184.6 26.9 288 5-430 141-437 (954)
98 PRK06108 aspartate aminotransf 99.8 2.2E-17 4.7E-22 168.1 25.7 285 4-434 86-381 (382)
99 PLN03227 serine palmitoyltrans 99.8 1.2E-16 2.7E-21 163.3 29.1 142 4-167 60-213 (392)
100 PLN02271 serine hydroxymethylt 99.8 2.2E-17 4.7E-22 170.6 22.9 300 8-434 220-539 (586)
101 PRK05764 aspartate aminotransf 99.8 1.7E-16 3.7E-21 162.3 29.3 288 5-435 94-391 (393)
102 PRK06225 aspartate aminotransf 99.8 6.5E-17 1.4E-21 164.7 26.1 150 4-179 85-241 (380)
103 PLN02414 glycine dehydrogenase 99.8 7.8E-17 1.7E-21 178.2 27.9 290 4-432 167-466 (993)
104 PRK05957 aspartate aminotransf 99.8 1.7E-16 3.7E-21 162.2 26.8 153 4-179 91-249 (389)
105 TIGR03588 PseC UDP-4-keto-6-de 99.8 2.3E-16 4.9E-21 160.8 27.0 154 5-183 47-203 (380)
106 TIGR01365 serC_2 phosphoserine 99.8 4.5E-17 9.9E-22 164.4 20.0 302 5-434 61-372 (374)
107 PRK15399 lysine decarboxylase 99.8 2.4E-16 5.2E-21 168.4 25.6 155 4-180 213-383 (713)
108 PRK06290 aspartate aminotransf 99.7 5E-16 1.1E-20 159.8 26.8 293 4-437 108-407 (410)
109 PRK07309 aromatic amino acid a 99.7 1.7E-15 3.7E-20 154.9 30.6 160 4-184 93-257 (391)
110 PRK07682 hypothetical protein; 99.7 2.6E-16 5.5E-21 160.2 24.3 286 4-436 83-377 (378)
111 PRK07324 transaminase; Validat 99.7 8.4E-16 1.8E-20 156.3 27.9 155 4-184 82-242 (373)
112 PRK15400 lysine decarboxylase 99.7 1E-16 2.2E-21 171.3 21.7 154 4-179 213-382 (714)
113 PRK13578 ornithine decarboxyla 99.7 1.5E-16 3.3E-21 170.1 22.8 158 4-180 192-371 (720)
114 KOG1360|consensus 99.7 1.6E-16 3.5E-21 154.3 20.8 262 39-438 256-527 (570)
115 PRK08363 alanine aminotransfer 99.7 1E-15 2.2E-20 157.0 27.9 149 4-177 95-251 (398)
116 KOG1359|consensus 99.7 1.6E-16 3.6E-21 148.9 19.2 280 5-437 130-414 (417)
117 PRK06207 aspartate aminotransf 99.7 2.2E-15 4.8E-20 154.9 29.6 150 4-177 104-265 (405)
118 PLN00145 tyrosine/nicotianamin 99.7 4E-15 8.7E-20 154.0 31.4 151 4-178 119-277 (430)
119 PRK00950 histidinol-phosphate 99.7 1.1E-15 2.4E-20 154.4 26.3 147 5-177 89-237 (361)
120 COG1003 GcvP Glycine cleavage 99.7 8.3E-16 1.8E-20 151.4 23.7 314 8-440 131-452 (496)
121 PRK13238 tnaA tryptophanase/L- 99.7 1.9E-15 4.2E-20 157.1 28.0 160 4-185 95-280 (460)
122 PRK07681 aspartate aminotransf 99.7 1.8E-15 3.8E-20 155.2 27.2 156 4-183 95-258 (399)
123 TIGR03537 DapC succinyldiamino 99.7 2.1E-15 4.6E-20 152.0 27.2 152 4-177 62-220 (350)
124 PRK14807 histidinol-phosphate 99.7 3.2E-15 7E-20 150.7 28.4 149 4-177 78-227 (351)
125 PTZ00377 alanine aminotransfer 99.7 4.7E-15 1E-19 155.8 30.4 120 4-139 140-264 (481)
126 cd00614 CGS_like CGS_like: Cys 99.7 9E-16 2E-20 155.8 24.2 144 4-182 57-206 (369)
127 PRK05968 hypothetical protein; 99.7 8.3E-16 1.8E-20 157.0 23.4 144 4-184 80-229 (389)
128 PRK11658 UDP-4-amino-4-deoxy-L 99.7 1.2E-15 2.5E-20 155.5 24.3 151 4-184 50-201 (379)
129 PRK09265 aminotransferase AlaT 99.7 4.9E-15 1.1E-19 152.2 29.0 150 4-177 97-254 (404)
130 PRK09082 methionine aminotrans 99.7 9E-16 1.9E-20 156.7 23.4 151 4-177 93-250 (386)
131 PRK07550 hypothetical protein; 99.7 3.2E-15 7E-20 152.6 27.2 153 4-179 92-252 (386)
132 PRK08134 O-acetylhomoserine am 99.7 4.3E-15 9.3E-20 153.4 28.0 140 4-178 81-225 (433)
133 PRK08114 cystathionine beta-ly 99.7 3.1E-15 6.8E-20 152.0 26.2 141 4-179 79-227 (395)
134 PRK03244 argD acetylornithine 99.7 5.9E-15 1.3E-19 151.2 28.3 151 4-180 105-268 (398)
135 PRK06767 methionine gamma-lyas 99.7 1.8E-15 4E-20 154.4 24.3 145 4-180 78-225 (386)
136 PF00155 Aminotran_1_2: Aminot 99.7 1.2E-15 2.6E-20 154.0 22.7 261 39-429 92-363 (363)
137 TIGR03540 DapC_direct LL-diami 99.7 3.6E-15 7.8E-20 152.0 26.2 154 5-183 94-256 (383)
138 PRK08912 hypothetical protein; 99.7 4.4E-15 9.5E-20 151.6 26.9 153 4-179 89-248 (387)
139 PLN02452 phosphoserine transam 99.7 1.2E-15 2.7E-20 153.8 22.1 251 48-435 103-363 (365)
140 PLN00175 aminotransferase fami 99.7 6.2E-15 1.3E-19 151.9 27.7 152 4-178 117-274 (413)
141 PRK05942 aspartate aminotransf 99.7 3.5E-15 7.6E-20 152.8 25.7 152 5-179 100-259 (394)
142 PRK08861 cystathionine gamma-s 99.7 6.1E-15 1.3E-19 150.2 27.1 147 4-182 70-219 (388)
143 PRK01688 histidinol-phosphate 99.7 1.3E-15 2.8E-20 153.6 22.0 150 4-178 76-228 (351)
144 PRK02731 histidinol-phosphate 99.7 6.9E-15 1.5E-19 149.0 27.4 276 4-434 86-365 (367)
145 TIGR01329 cysta_beta_ly_E cyst 99.7 2.7E-15 5.8E-20 152.7 24.4 143 4-182 64-212 (378)
146 PLN02376 1-aminocyclopropane-1 99.7 1.4E-14 2.9E-19 152.3 30.4 161 4-181 121-297 (496)
147 PLN02187 rooty/superroot1 99.7 9.6E-15 2.1E-19 152.4 28.8 152 4-179 133-292 (462)
148 TIGR01265 tyr_nico_aTase tyros 99.7 1.1E-14 2.4E-19 149.5 28.9 152 4-179 98-257 (403)
149 PRK13355 bifunctional HTH-doma 99.7 1.1E-14 2.3E-19 154.4 29.1 151 4-177 210-367 (517)
150 PRK08056 threonine-phosphate d 99.7 9.5E-15 2.1E-19 147.6 27.5 151 4-181 74-230 (356)
151 PRK05387 histidinol-phosphate 99.7 6.2E-15 1.3E-19 148.5 26.0 149 4-183 79-229 (353)
152 COG3844 Kynureninase [Amino ac 99.7 2.8E-15 6.2E-20 142.7 21.4 293 6-437 96-404 (407)
153 PRK04870 histidinol-phosphate 99.7 5.7E-15 1.2E-19 149.1 25.3 272 4-432 83-355 (356)
154 PRK08064 cystathionine beta-ly 99.7 7E-15 1.5E-19 150.2 25.9 145 4-184 71-221 (390)
155 TIGR01328 met_gam_lyase methio 99.7 6.9E-15 1.5E-19 150.3 25.3 145 4-184 76-226 (391)
156 PRK07777 aminotransferase; Val 99.7 1.4E-14 3.1E-19 147.8 27.6 153 4-179 87-248 (387)
157 PRK08960 hypothetical protein; 99.7 1.1E-14 2.5E-19 148.6 26.8 151 4-179 94-250 (387)
158 TIGR01324 cysta_beta_ly_B cyst 99.7 4.8E-15 1E-19 150.6 23.5 141 4-179 67-213 (377)
159 PRK04635 histidinol-phosphate 99.7 4.1E-15 8.9E-20 150.1 22.9 149 4-179 79-230 (354)
160 PRK06348 aspartate aminotransf 99.7 1.8E-14 3.8E-19 147.1 27.6 152 4-178 91-249 (384)
161 PRK00854 rocD ornithine--oxo-a 99.7 2.2E-14 4.8E-19 147.2 28.5 159 4-180 100-273 (401)
162 cd00610 OAT_like Acetyl ornith 99.7 1.9E-14 4.2E-19 147.8 28.1 159 4-179 98-275 (413)
163 PRK09028 cystathionine beta-ly 99.7 1.1E-14 2.4E-19 148.3 25.8 132 4-170 78-213 (394)
164 PRK07568 aspartate aminotransf 99.7 1.7E-14 3.7E-19 147.6 27.3 156 4-182 90-254 (397)
165 PLN03026 histidinol-phosphate 99.7 2E-14 4.4E-19 146.5 27.3 149 4-177 105-254 (380)
166 PRK07811 cystathionine gamma-s 99.7 1.8E-14 3.8E-19 147.2 26.6 147 4-182 78-227 (388)
167 PRK03158 histidinol-phosphate 99.7 1.4E-14 3.1E-19 146.3 25.7 151 4-179 83-238 (359)
168 PRK08133 O-succinylhomoserine 99.7 1.9E-14 4.1E-19 147.1 26.9 143 4-181 78-225 (390)
169 PRK10534 L-threonine aldolase; 99.7 1.7E-15 3.7E-20 151.4 18.8 157 5-184 52-215 (333)
170 PRK09276 LL-diaminopimelate am 99.7 1.2E-14 2.7E-19 148.2 25.2 149 5-177 96-253 (385)
171 PLN02656 tyrosine transaminase 99.7 2.2E-14 4.7E-19 147.7 27.0 151 4-178 98-256 (409)
172 PRK15481 transcriptional regul 99.7 2.2E-14 4.7E-19 148.7 27.0 148 4-177 143-295 (431)
173 PRK05613 O-acetylhomoserine am 99.7 2.5E-14 5.4E-19 147.7 27.0 142 4-179 86-232 (437)
174 PRK07582 cystathionine gamma-l 99.7 1.3E-14 2.8E-19 147.1 24.4 142 3-182 66-213 (366)
175 PTZ00433 tyrosine aminotransfe 99.7 6E-14 1.3E-18 144.6 29.3 150 4-177 106-263 (412)
176 PRK09105 putative aminotransfe 99.7 1.4E-14 3.1E-19 147.1 24.4 153 4-184 97-253 (370)
177 cd01494 AAT_I Aspartate aminot 99.7 9.6E-16 2.1E-20 136.6 13.9 149 4-178 19-170 (170)
178 TIGR01264 tyr_amTase_E tyrosin 99.7 5.2E-14 1.1E-18 144.5 28.5 152 4-179 97-256 (401)
179 PRK08776 cystathionine gamma-s 99.7 5.3E-14 1.1E-18 144.3 28.3 144 4-182 77-226 (405)
180 PRK07683 aminotransferase A; V 99.7 5.1E-14 1.1E-18 143.9 27.9 151 4-178 91-248 (387)
181 PRK08248 O-acetylhomoserine am 99.7 3.5E-14 7.6E-19 146.6 26.9 142 4-180 81-227 (431)
182 TIGR00461 gcvP glycine dehydro 99.7 2.1E-14 4.6E-19 157.3 26.1 264 41-430 154-426 (939)
183 PRK12414 putative aminotransfe 99.7 2.9E-14 6.4E-19 145.5 25.7 153 4-179 92-251 (384)
184 PRK08045 cystathionine gamma-s 99.7 5.7E-14 1.2E-18 143.3 27.5 147 4-182 69-218 (386)
185 PRK07812 O-acetylhomoserine am 99.7 4.1E-14 8.9E-19 146.1 26.4 143 4-180 86-233 (436)
186 PRK06836 aspartate aminotransf 99.7 5.9E-14 1.3E-18 143.8 27.4 152 4-179 98-260 (394)
187 PTZ00125 ornithine aminotransf 99.7 1.6E-13 3.4E-18 140.7 30.6 161 4-180 90-264 (400)
188 PLN02509 cystathionine beta-ly 99.7 2.6E-14 5.6E-19 148.2 24.8 142 4-181 150-297 (464)
189 PLN02450 1-aminocyclopropane-1 99.7 1.2E-13 2.6E-18 144.5 29.9 159 5-180 114-289 (468)
190 PRK04073 rocD ornithine--oxo-a 99.7 7.2E-14 1.6E-18 143.2 27.8 159 4-179 99-271 (396)
191 COG1168 MalY Bifunctional PLP- 99.7 4.6E-14 9.9E-19 137.8 24.7 287 5-432 86-383 (388)
192 PRK08068 transaminase; Reviewe 99.7 5.2E-14 1.1E-18 143.9 26.6 151 4-177 96-254 (389)
193 COG0399 WecE Predicted pyridox 99.7 5.2E-14 1.1E-18 140.7 25.7 154 4-186 51-205 (374)
194 PRK07050 cystathionine beta-ly 99.7 1.7E-14 3.7E-19 147.5 22.8 145 4-183 82-232 (394)
195 PRK07504 O-succinylhomoserine 99.7 4.4E-14 9.5E-19 144.8 25.7 143 5-182 83-230 (398)
196 PLN02607 1-aminocyclopropane-1 99.7 1.3E-13 2.9E-18 143.2 29.6 159 5-181 123-297 (447)
197 PRK05166 histidinol-phosphate 99.6 4E-14 8.6E-19 143.8 24.9 155 4-182 90-250 (371)
198 PRK08574 cystathionine gamma-s 99.6 7.7E-14 1.7E-18 142.3 27.0 147 4-182 70-218 (385)
199 TIGR01140 L_thr_O3P_dcar L-thr 99.6 5.2E-14 1.1E-18 140.7 25.1 142 4-180 66-211 (330)
200 PRK05994 O-acetylhomoserine am 99.6 8.9E-14 1.9E-18 143.7 27.4 140 4-178 80-224 (427)
201 PLN00143 tyrosine/nicotianamin 99.6 1.4E-13 3.1E-18 141.6 28.9 151 4-178 99-257 (409)
202 PLN02242 methionine gamma-lyas 99.6 7.7E-14 1.7E-18 143.6 26.7 145 4-184 93-244 (418)
203 TIGR03576 pyridox_MJ0158 pyrid 99.6 3.1E-14 6.8E-19 143.1 23.1 147 4-187 73-225 (346)
204 PRK07337 aminotransferase; Val 99.6 7.4E-14 1.6E-18 142.7 26.0 150 4-179 92-248 (388)
205 PRK08636 aspartate aminotransf 99.6 1.6E-13 3.4E-18 141.1 28.5 156 4-177 97-262 (403)
206 PRK08153 histidinol-phosphate 99.6 1.4E-13 3.1E-18 139.7 27.6 149 4-177 86-237 (369)
207 PRK08249 cystathionine gamma-s 99.6 1.1E-13 2.4E-18 141.7 26.7 145 4-183 81-230 (398)
208 PRK06107 aspartate aminotransf 99.6 1.1E-13 2.4E-18 142.1 26.7 151 4-177 95-255 (402)
209 PF01212 Beta_elim_lyase: Beta 99.6 3.2E-15 6.9E-20 146.1 14.4 158 4-183 46-212 (290)
210 PRK07908 hypothetical protein; 99.6 6.9E-14 1.5E-18 140.9 24.6 147 4-185 77-225 (349)
211 PF02347 GDC-P: Glycine cleava 99.6 1.4E-14 3.1E-19 146.6 19.5 269 41-429 155-429 (429)
212 PRK07505 hypothetical protein; 99.6 2E-13 4.3E-18 140.2 28.4 159 4-184 107-269 (402)
213 TIGR01325 O_suc_HS_sulf O-succ 99.6 1.3E-13 2.7E-18 140.6 26.6 144 4-182 71-219 (380)
214 PRK07810 O-succinylhomoserine 99.6 7E-14 1.5E-18 143.4 24.8 141 4-179 87-233 (403)
215 PRK06234 methionine gamma-lyas 99.6 1.5E-13 3.3E-18 140.9 27.3 141 4-179 81-229 (400)
216 PRK08247 cystathionine gamma-s 99.6 4.7E-14 1E-18 143.1 23.0 142 4-181 69-216 (366)
217 PRK07269 cystathionine gamma-s 99.6 3.2E-14 6.8E-19 144.0 21.5 145 4-182 71-217 (364)
218 PRK03317 histidinol-phosphate 99.6 1.7E-13 3.6E-18 139.1 26.7 150 4-177 90-242 (368)
219 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.6 1.7E-13 3.6E-18 139.5 26.5 149 4-183 48-199 (375)
220 PRK01533 histidinol-phosphate 99.6 3.5E-14 7.7E-19 144.0 21.1 276 4-444 83-364 (366)
221 PRK06358 threonine-phosphate d 99.6 3.3E-13 7.1E-18 136.3 28.0 151 4-181 73-231 (354)
222 TIGR02080 O_succ_thio_ly O-suc 99.6 2.7E-13 5.8E-18 138.2 27.2 147 4-182 68-217 (382)
223 PLN02231 alanine transaminase 99.6 5.5E-13 1.2E-17 141.2 30.5 121 4-140 193-318 (534)
224 PRK06425 histidinol-phosphate 99.6 3.2E-13 7E-18 135.1 27.3 151 4-185 59-214 (332)
225 TIGR02379 ECA_wecE TDP-4-keto- 99.6 2.1E-13 4.5E-18 138.7 26.0 153 4-186 48-203 (376)
226 PRK15407 lipopolysaccharide bi 99.6 9E-14 2E-18 143.9 23.7 157 4-183 80-239 (438)
227 TIGR01885 Orn_aminotrans ornit 99.6 5.1E-13 1.1E-17 137.2 28.7 288 4-433 96-400 (401)
228 PRK04781 histidinol-phosphate 99.6 5.8E-13 1.3E-17 135.0 28.7 157 4-184 78-240 (364)
229 PRK09148 aminotransferase; Val 99.6 4.1E-13 8.9E-18 138.0 27.8 158 4-183 94-257 (405)
230 PRK07503 methionine gamma-lyas 99.6 2.6E-13 5.7E-18 139.3 26.2 145 4-184 82-232 (403)
231 PRK08175 aminotransferase; Val 99.6 3.7E-13 7.9E-18 137.9 27.3 157 4-183 93-256 (395)
232 PRK06084 O-acetylhomoserine am 99.6 4.1E-13 8.9E-18 138.5 27.6 140 4-178 75-219 (425)
233 COG0403 GcvP Glycine cleavage 99.6 2.5E-13 5.4E-18 134.2 24.4 271 40-432 164-447 (450)
234 PF01041 DegT_DnrJ_EryC1: DegT 99.6 2.2E-13 4.8E-18 138.0 24.6 151 4-185 42-195 (363)
235 cd00617 Tnase_like Tryptophana 99.6 7E-13 1.5E-17 136.5 28.0 161 4-186 70-256 (431)
236 PF00464 SHMT: Serine hydroxym 99.6 8.5E-14 1.8E-18 140.5 20.2 291 8-429 92-399 (399)
237 PRK07671 cystathionine beta-ly 99.6 3.9E-13 8.5E-18 136.8 25.2 143 4-182 67-215 (377)
238 PRK06460 hypothetical protein; 99.6 5.5E-13 1.2E-17 135.7 26.1 142 5-182 63-210 (376)
239 PRK06176 cystathionine gamma-s 99.6 5.4E-13 1.2E-17 135.8 25.8 142 4-181 67-214 (380)
240 PRK05939 hypothetical protein; 99.6 4.8E-13 1E-17 136.9 25.2 133 4-171 64-199 (397)
241 COG0112 GlyA Glycine/serine hy 99.6 2.5E-13 5.4E-18 133.2 21.8 287 8-435 94-390 (413)
242 PRK07366 succinyldiaminopimela 99.6 8.4E-13 1.8E-17 134.9 26.8 150 5-177 95-253 (388)
243 PRK06855 aminotransferase; Val 99.6 1.3E-12 2.8E-17 135.6 28.4 152 4-177 98-257 (433)
244 PRK03321 putative aminotransfe 99.6 4.5E-13 9.7E-18 135.0 22.8 155 4-184 76-236 (352)
245 COG1982 LdcC Arginine/lysine/o 99.6 1.1E-13 2.4E-18 142.8 18.5 152 6-179 90-247 (557)
246 TIGR03539 DapC_actino succinyl 99.6 9.8E-13 2.1E-17 132.9 24.8 145 4-182 82-235 (357)
247 PRK04311 selenocysteine syntha 99.6 2.9E-12 6.2E-17 133.0 28.5 149 4-180 144-308 (464)
248 PRK06702 O-acetylhomoserine am 99.6 5.2E-12 1.1E-16 130.0 29.9 134 4-171 78-215 (432)
249 PRK12462 phosphoserine aminotr 99.6 3.3E-13 7.2E-18 135.2 20.6 215 96-435 143-362 (364)
250 TIGR02618 tyr_phenol_ly tyrosi 99.6 8.1E-13 1.8E-17 134.5 23.5 162 4-187 88-275 (450)
251 TIGR03246 arg_catab_astC succi 99.6 2.8E-12 6.1E-17 131.5 27.7 158 4-180 94-264 (397)
252 TIGR01326 OAH_OAS_sulfhy OAH/O 99.6 1.7E-12 3.7E-17 133.9 26.1 142 4-180 74-220 (418)
253 COG0079 HisC Histidinol-phosph 99.5 2.6E-12 5.5E-17 129.3 26.3 273 4-435 77-354 (356)
254 PLN02624 ornithine-delta-amino 99.5 1.1E-11 2.3E-16 129.9 32.0 162 4-179 134-309 (474)
255 PRK05967 cystathionine beta-ly 99.5 1.8E-12 3.8E-17 132.1 25.2 131 4-169 81-215 (395)
256 PRK02610 histidinol-phosphate 99.5 6.6E-12 1.4E-16 127.7 29.0 158 5-184 94-254 (374)
257 PRK07865 N-succinyldiaminopime 99.5 1.6E-12 3.5E-17 131.6 24.3 147 4-183 88-242 (364)
258 PRK09147 succinyldiaminopimela 99.5 3.5E-12 7.5E-17 130.7 26.7 154 4-177 92-259 (396)
259 TIGR00707 argD acetylornithine 99.5 3E-12 6.5E-17 130.2 26.0 160 4-179 86-254 (379)
260 PRK01278 argD acetylornithine 99.5 4.6E-12 1E-16 129.5 27.1 163 4-180 90-260 (389)
261 PF05889 SLA_LP_auto_ag: Solub 99.5 1.3E-12 2.9E-17 129.5 21.9 199 4-242 76-280 (389)
262 PRK09275 aspartate aminotransf 99.5 3.8E-12 8.2E-17 133.6 26.4 338 4-442 163-524 (527)
263 PRK05964 adenosylmethionine--8 99.5 4.3E-12 9.3E-17 131.3 26.3 166 4-180 104-286 (423)
264 TIGR03538 DapC_gpp succinyldia 99.5 4.9E-12 1.1E-16 129.5 26.4 153 4-177 92-258 (393)
265 KOG0259|consensus 99.5 1.3E-11 2.9E-16 120.0 27.5 297 4-437 128-435 (447)
266 PRK02936 argD acetylornithine 99.5 1.5E-11 3.3E-16 125.1 29.4 151 4-179 88-251 (377)
267 PRK03715 argD acetylornithine 99.5 4.8E-12 1E-16 129.6 25.8 161 4-180 95-264 (395)
268 TIGR00474 selA seryl-tRNA(sec) 99.5 3.4E-12 7.4E-17 132.1 24.7 150 4-180 139-303 (454)
269 COG1167 ARO8 Transcriptional r 99.5 7.7E-12 1.7E-16 130.4 27.2 290 4-436 157-456 (459)
270 PRK02627 acetylornithine amino 99.5 1.4E-11 3E-16 126.1 28.3 162 4-180 98-267 (396)
271 KOG0256|consensus 99.5 8E-12 1.7E-16 122.6 24.5 299 5-434 149-460 (471)
272 PRK07392 threonine-phosphate d 99.5 2.5E-11 5.5E-16 122.8 29.2 149 4-179 76-232 (360)
273 COG2873 MET17 O-acetylhomoseri 99.5 5.5E-12 1.2E-16 122.6 22.6 142 3-179 78-224 (426)
274 TIGR03801 asp_4_decarbox aspar 99.5 8.5E-12 1.8E-16 130.8 25.6 157 4-180 157-327 (521)
275 PRK11522 putrescine--2-oxoglut 99.5 2.7E-11 5.8E-16 126.2 29.3 295 4-439 143-455 (459)
276 PRK06434 cystathionine gamma-l 99.5 5.1E-12 1.1E-16 128.5 23.2 140 4-181 81-226 (384)
277 PRK05093 argD bifunctional N-s 99.5 4.9E-11 1.1E-15 122.6 30.8 156 4-179 99-268 (403)
278 PRK04260 acetylornithine amino 99.5 2E-11 4.4E-16 124.2 27.3 153 5-180 87-250 (375)
279 PLN02672 methionine S-methyltr 99.5 1.5E-11 3.3E-16 137.0 28.1 115 4-140 756-876 (1082)
280 PRK13237 tyrosine phenol-lyase 99.5 2.1E-11 4.5E-16 124.6 26.6 162 4-187 95-282 (460)
281 KOG1357|consensus 99.5 1.2E-12 2.6E-17 129.7 16.3 273 39-435 220-502 (519)
282 PRK07590 L,L-diaminopimelate a 99.5 1.3E-11 2.7E-16 127.2 24.7 149 4-178 101-264 (409)
283 PRK03967 histidinol-phosphate 99.5 3E-11 6.4E-16 121.2 25.6 145 4-178 74-219 (337)
284 KOG0630|consensus 99.5 1.9E-12 4.1E-17 128.9 16.0 374 39-441 230-700 (838)
285 PRK14809 histidinol-phosphate 99.4 6.7E-11 1.4E-15 119.5 26.9 150 4-179 84-238 (357)
286 PRK12381 bifunctional succinyl 99.4 4.3E-11 9.4E-16 123.1 25.7 157 4-179 98-267 (406)
287 TIGR03542 DAPAT_plant LL-diami 99.4 4.7E-11 1E-15 122.7 25.4 151 4-179 97-262 (402)
288 PRK08637 hypothetical protein; 99.4 7.7E-11 1.7E-15 120.5 26.4 155 5-178 72-242 (388)
289 PRK08117 4-aminobutyrate amino 99.4 1.8E-10 3.9E-15 119.5 29.2 162 4-180 105-292 (433)
290 TIGR03372 putres_am_tran putre 99.4 2.6E-10 5.6E-15 118.1 30.1 161 4-180 136-310 (442)
291 PLN02368 alanine transaminase 99.4 3.8E-11 8.1E-16 123.4 23.1 121 4-140 132-257 (407)
292 PRK09440 avtA valine--pyruvate 99.4 1.4E-10 3.1E-15 119.5 27.4 155 4-177 99-262 (416)
293 PRK09257 aromatic amino acid a 99.4 3.3E-10 7.2E-15 116.1 29.6 155 5-177 97-260 (396)
294 PRK14808 histidinol-phosphate 99.4 1E-10 2.3E-15 117.2 25.3 145 4-185 78-223 (335)
295 COG0160 GabT 4-aminobutyrate a 99.4 3E-10 6.5E-15 115.9 28.6 298 4-436 119-446 (447)
296 PRK08354 putative aminotransfe 99.4 1.3E-10 2.9E-15 115.2 25.6 137 4-177 56-196 (311)
297 PF01053 Cys_Met_Meta_PP: Cys/ 99.4 2.1E-10 4.5E-15 116.6 27.3 141 4-179 72-219 (386)
298 PRK09264 diaminobutyrate--2-ox 99.4 2.9E-10 6.2E-15 117.7 28.7 162 5-180 105-284 (425)
299 PRK05664 threonine-phosphate d 99.4 2.1E-10 4.6E-15 114.7 26.8 141 4-184 66-212 (330)
300 KOG2040|consensus 99.4 5.2E-11 1.1E-15 122.2 22.3 279 39-438 629-921 (1001)
301 COG0001 HemL Glutamate-1-semia 99.4 1.7E-10 3.6E-15 116.0 25.5 158 5-186 112-289 (432)
302 PTZ00376 aspartate aminotransf 99.4 2.3E-10 4.9E-15 117.7 27.4 153 7-176 102-264 (404)
303 PRK07049 methionine gamma-lyas 99.4 2.7E-10 5.8E-15 117.8 27.9 138 4-170 100-247 (427)
304 PRK05839 hypothetical protein; 99.4 1.7E-10 3.7E-15 117.4 25.9 110 5-138 86-200 (374)
305 PRK12566 glycine dehydrogenase 99.4 5.5E-11 1.2E-15 130.1 23.3 261 41-430 169-439 (954)
306 COG4992 ArgD Ornithine/acetylo 99.4 2.9E-10 6.2E-15 113.2 24.9 153 4-178 102-267 (404)
307 PRK05769 4-aminobutyrate amino 99.4 6.9E-10 1.5E-14 115.3 29.1 163 4-180 117-306 (441)
308 TIGR02407 ectoine_ectB diamino 99.4 4.6E-10 1E-14 115.7 27.6 162 5-180 101-280 (412)
309 PLN02760 4-aminobutyrate:pyruv 99.4 2.2E-10 4.8E-15 120.5 25.6 166 4-180 153-346 (504)
310 PRK06541 hypothetical protein; 99.3 1.1E-09 2.3E-14 114.3 29.2 166 4-180 114-307 (460)
311 PRK04612 argD acetylornithine 99.3 7.7E-10 1.7E-14 113.8 27.6 158 4-179 100-271 (408)
312 PRK08360 4-aminobutyrate amino 99.3 1.3E-09 2.9E-14 113.1 29.4 161 4-179 103-288 (443)
313 PRK00062 glutamate-1-semialdeh 99.3 9.6E-10 2.1E-14 113.8 27.3 153 4-179 108-280 (426)
314 TIGR00713 hemL glutamate-1-sem 99.3 1.3E-09 2.9E-14 112.7 28.3 153 4-179 106-278 (423)
315 PRK06959 putative threonine-ph 99.3 8.7E-10 1.9E-14 110.7 26.1 143 4-185 73-219 (339)
316 PRK06058 4-aminobutyrate amino 99.3 2E-09 4.3E-14 112.0 29.3 163 4-180 119-304 (443)
317 PLN02397 aspartate transaminas 99.3 1.1E-09 2.3E-14 113.4 26.9 132 39-176 141-282 (423)
318 PRK12403 putative aminotransfe 99.3 4.4E-09 9.5E-14 109.8 31.3 165 4-180 117-308 (460)
319 COG0626 MetC Cystathionine bet 99.3 7.1E-10 1.5E-14 111.8 23.5 134 4-171 80-217 (396)
320 KOG0257|consensus 99.3 3.2E-10 6.9E-15 112.2 20.5 114 4-140 95-219 (420)
321 PRK13360 omega amino acid--pyr 99.3 3.5E-09 7.5E-14 110.0 28.9 166 4-180 108-301 (442)
322 TIGR00700 GABAtrnsam 4-aminobu 99.3 9.6E-09 2.1E-13 106.2 31.6 162 4-180 96-282 (420)
323 PRK06062 hypothetical protein; 99.3 1.3E-08 2.7E-13 106.2 32.5 161 4-180 114-300 (451)
324 PRK08593 4-aminobutyrate amino 99.3 1.8E-08 3.9E-13 104.8 33.1 162 4-180 105-292 (445)
325 PRK05639 4-aminobutyrate amino 99.3 6.8E-09 1.5E-13 108.2 29.6 163 4-180 115-307 (457)
326 PRK06105 aminotransferase; Pro 99.3 6.6E-09 1.4E-13 108.5 29.0 166 4-180 111-304 (460)
327 PRK12389 glutamate-1-semialdeh 99.2 1.4E-08 3.1E-13 105.1 31.0 154 4-180 111-284 (428)
328 PRK06777 4-aminobutyrate amino 99.2 9.3E-09 2E-13 106.3 29.4 161 4-179 103-282 (421)
329 TIGR02617 tnaA_trp_ase tryptop 99.2 9.1E-10 2E-14 111.5 21.2 157 5-180 92-281 (467)
330 PRK07678 aminotransferase; Val 99.2 1.6E-08 3.5E-13 105.4 31.2 166 4-180 107-299 (451)
331 KOG0634|consensus 99.2 9.2E-09 2E-13 102.1 27.5 122 2-141 124-252 (472)
332 PRK00615 glutamate-1-semialdeh 99.2 6.6E-09 1.4E-13 107.6 27.5 154 4-180 112-285 (433)
333 PLN00144 acetylornithine trans 99.2 6.9E-09 1.5E-13 105.9 27.3 160 4-180 74-252 (382)
334 TIGR00709 dat 2,4-diaminobutyr 99.2 1.3E-08 2.8E-13 105.9 29.5 162 5-180 105-291 (442)
335 PLN02482 glutamate-1-semialdeh 99.2 1.8E-08 4E-13 105.3 30.4 154 4-180 157-330 (474)
336 PRK09221 beta alanine--pyruvat 99.2 1.1E-08 2.3E-13 106.5 28.4 166 4-180 111-304 (445)
337 PRK06149 hypothetical protein; 99.2 1.2E-08 2.7E-13 115.5 31.1 162 4-180 643-830 (972)
338 TIGR00508 bioA adenosylmethion 99.2 5.8E-09 1.3E-13 108.0 26.3 166 4-180 107-294 (427)
339 PRK06173 adenosylmethionine--8 99.2 8.9E-09 1.9E-13 106.6 27.1 165 4-180 106-293 (429)
340 PRK07495 4-aminobutyrate amino 99.2 5.3E-08 1.2E-12 100.7 32.4 162 4-180 103-283 (425)
341 PRK09792 4-aminobutyrate trans 99.2 3.8E-08 8.3E-13 101.8 29.8 162 4-180 103-283 (421)
342 PRK07480 putative aminotransfe 99.2 6.8E-08 1.5E-12 100.8 30.9 167 4-180 113-305 (456)
343 PRK06938 diaminobutyrate--2-ox 99.2 2.3E-08 5.1E-13 104.4 27.5 162 5-180 129-316 (464)
344 PRK07036 hypothetical protein; 99.2 4.5E-08 9.8E-13 102.4 29.5 167 4-180 114-307 (466)
345 TIGR03251 LAT_fam L-lysine 6-t 99.2 2.3E-08 5.1E-13 103.6 27.2 157 4-166 105-289 (431)
346 KOG1358|consensus 99.1 8.4E-09 1.8E-13 101.0 21.4 274 39-436 177-466 (467)
347 PRK06917 hypothetical protein; 99.1 2.1E-07 4.5E-12 96.9 33.5 167 4-180 93-286 (447)
348 PRK06082 4-aminobutyrate amino 99.1 6.6E-08 1.4E-12 100.9 29.8 159 4-180 132-314 (459)
349 PRK06148 hypothetical protein; 99.1 4.8E-08 1E-12 111.0 30.8 163 4-180 682-870 (1013)
350 PRK06943 adenosylmethionine--8 99.1 1.3E-07 2.8E-12 98.6 31.4 166 4-180 116-308 (453)
351 KOG3846|consensus 99.1 3.3E-09 7.1E-14 100.8 17.4 294 47-437 166-463 (465)
352 PRK04013 argD acetylornithine/ 99.1 6.1E-08 1.3E-12 98.2 27.5 151 4-180 83-246 (364)
353 PRK07986 adenosylmethionine--8 99.1 2.2E-08 4.8E-13 103.6 24.6 164 4-179 105-290 (428)
354 PRK08297 L-lysine aminotransfe 99.1 5.7E-08 1.2E-12 101.0 27.7 157 4-166 112-296 (443)
355 PRK05965 hypothetical protein; 99.1 1E-07 2.2E-12 99.6 29.6 167 4-180 109-301 (459)
356 PRK07030 adenosylmethionine--8 99.1 7.3E-08 1.6E-12 100.8 28.3 166 4-180 109-301 (466)
357 PRK08088 4-aminobutyrate amino 99.1 6.1E-08 1.3E-12 100.4 27.5 160 4-179 104-283 (425)
358 PRK07482 hypothetical protein; 99.1 1.8E-07 3.9E-12 97.8 30.8 167 4-180 113-306 (461)
359 KOG2467|consensus 99.1 1.2E-08 2.7E-13 99.0 20.0 247 74-434 172-425 (477)
360 PRK07481 hypothetical protein; 99.1 2.2E-07 4.8E-12 96.8 30.6 169 4-180 106-299 (449)
361 PRK06916 adenosylmethionine--8 99.1 1.1E-07 2.5E-12 99.3 28.3 166 4-180 118-310 (460)
362 PRK06931 diaminobutyrate--2-ox 99.1 3.4E-07 7.4E-12 95.6 31.8 160 6-179 125-309 (459)
363 PRK08742 adenosylmethionine--8 99.1 2E-07 4.4E-12 97.5 29.9 166 4-180 131-323 (472)
364 PRK06918 4-aminobutyrate amino 99.1 2.8E-07 6.1E-12 96.2 31.0 162 4-180 117-304 (451)
365 PRK07483 hypothetical protein; 99.1 4.3E-07 9.4E-12 94.5 31.8 167 4-180 92-286 (443)
366 PRK06209 glutamate-1-semialdeh 99.1 3.1E-08 6.7E-13 102.7 22.9 153 4-179 106-266 (431)
367 TIGR00699 GABAtrns_euk 4-amino 99.1 3.7E-08 8E-13 102.5 23.2 159 4-167 124-325 (464)
368 PRK05630 adenosylmethionine--8 99.0 7E-07 1.5E-11 92.3 29.9 167 4-180 102-287 (422)
369 PRK07046 aminotransferase; Val 99.0 5.8E-07 1.3E-11 93.7 28.7 151 4-180 132-301 (453)
370 KOG1404|consensus 98.9 1.2E-07 2.6E-12 93.2 18.9 294 5-429 112-432 (442)
371 COG0161 BioA Adenosylmethionin 98.8 1E-06 2.2E-11 89.9 23.7 161 4-180 107-301 (449)
372 KOG0053|consensus 98.8 2.2E-07 4.8E-12 93.1 16.3 139 5-178 95-239 (409)
373 COG1932 SerC Phosphoserine ami 98.7 1.2E-06 2.6E-11 86.0 19.6 285 2-435 68-363 (365)
374 COG3977 Alanine-alpha-ketoisov 98.7 3E-06 6.6E-11 80.8 19.2 92 77-180 168-265 (417)
375 KOG1402|consensus 98.6 8.3E-06 1.8E-10 78.7 19.9 159 7-181 121-294 (427)
376 KOG0633|consensus 98.6 3.8E-06 8.2E-11 78.6 16.6 88 43-137 114-202 (375)
377 KOG1401|consensus 98.5 0.00022 4.8E-09 71.0 27.6 161 5-181 119-292 (433)
378 KOG0258|consensus 98.5 3.2E-05 6.9E-10 76.3 21.4 122 4-140 138-262 (475)
379 PLN02974 adenosylmethionine-8- 98.5 0.00019 4.2E-09 79.5 29.3 97 81-180 567-671 (817)
380 COG1448 TyrB Aspartate/tyrosin 98.4 4E-05 8.6E-10 75.8 20.8 145 5-168 97-250 (396)
381 KOG3843|consensus 98.4 3.3E-06 7.2E-11 79.1 12.6 153 6-177 79-238 (432)
382 COG1921 SelA Selenocysteine sy 98.4 3.3E-06 7.1E-11 84.5 12.2 157 4-186 85-243 (395)
383 COG3033 TnaA Tryptophanase [Am 98.4 8E-05 1.7E-09 72.9 21.2 138 39-181 122-284 (471)
384 PF00202 Aminotran_3: Aminotra 98.3 8.1E-05 1.8E-09 74.8 19.3 167 4-180 78-262 (339)
385 PF12897 Aminotran_MocR: Alani 98.2 0.00078 1.7E-08 67.1 24.4 135 39-181 123-271 (425)
386 KOG2040|consensus 98.1 0.00026 5.6E-09 74.0 19.3 262 42-430 207-478 (1001)
387 PF06838 Met_gamma_lyase: Meth 98.0 0.00011 2.3E-09 72.6 13.7 152 9-186 79-245 (403)
388 PF03841 SelA: L-seryl-tRNA se 97.9 1.3E-05 2.8E-10 79.6 4.6 132 42-186 87-233 (367)
389 KOG2790|consensus 97.8 0.00093 2E-08 63.6 15.0 262 39-435 99-368 (370)
390 KOG1403|consensus 97.6 0.0064 1.4E-07 58.5 17.9 123 4-137 104-254 (452)
391 KOG1412|consensus 97.6 0.025 5.4E-07 54.9 21.2 159 4-181 101-273 (410)
392 KOG1405|consensus 97.5 0.0023 5E-08 62.8 13.6 83 79-161 254-341 (484)
393 KOG0629|consensus 96.8 0.0011 2.4E-08 66.5 3.5 59 189-247 346-404 (510)
394 COG4100 Cystathionine beta-lya 96.5 0.014 3.1E-07 56.2 8.9 151 9-185 90-255 (416)
395 KOG1411|consensus 93.6 1.1 2.4E-05 44.4 11.8 124 39-168 145-277 (427)
396 PF04864 Alliinase_C: Allinase 88.6 28 0.00061 34.8 18.2 148 4-186 68-217 (363)
397 PF00282 Pyridoxal_deC: Pyrido 81.8 0.73 1.6E-05 47.0 1.6 59 262-320 279-337 (373)
398 KOG0630|consensus 66.2 10 0.00022 39.5 5.0 48 297-344 393-440 (838)
399 PLN02590 probable tyrosine dec 63.2 7.5 0.00016 41.6 3.8 56 265-320 375-430 (539)
400 COG2515 Acd 1-aminocyclopropan 59.7 83 0.0018 31.0 9.7 120 2-138 63-192 (323)
401 COG1066 Sms Predicted ATP-depe 58.4 1.2E+02 0.0027 31.3 11.1 131 41-182 122-275 (456)
402 TIGR01362 KDO8P_synth 3-deoxy- 57.9 76 0.0017 30.5 9.0 60 74-136 123-185 (258)
403 TIGR01361 DAHP_synth_Bsub phos 57.7 93 0.002 30.0 9.9 61 77-138 142-206 (260)
404 PRK13396 3-deoxy-7-phosphohept 57.5 82 0.0018 31.8 9.7 65 75-140 216-285 (352)
405 COG2870 RfaE ADP-heptose synth 56.5 32 0.00069 35.2 6.5 33 99-133 146-178 (467)
406 smart00642 Aamy Alpha-amylase 54.9 34 0.00074 30.5 6.0 28 107-134 64-91 (166)
407 cd01455 vWA_F11C1-5a_type Von 54.6 41 0.00088 30.9 6.5 52 80-131 94-147 (191)
408 PLN02880 tyrosine decarboxylas 52.0 14 0.0003 39.2 3.5 52 268-319 330-381 (490)
409 PF05368 NmrA: NmrA-like famil 49.9 83 0.0018 29.1 8.1 75 41-131 25-99 (233)
410 PF08659 KR: KR domain; Inter 49.5 1.8E+02 0.0038 25.9 9.9 91 5-114 2-99 (181)
411 PRK13397 3-deoxy-7-phosphohept 48.5 1.5E+02 0.0032 28.5 9.5 62 77-139 132-197 (250)
412 COG1105 FruK Fructose-1-phosph 47.8 59 0.0013 32.2 6.8 92 43-136 57-169 (310)
413 PRK00685 metal-dependent hydro 45.5 2.4E+02 0.0052 25.8 10.5 77 43-127 138-215 (228)
414 PF06506 PrpR_N: Propionate ca 45.3 1.7E+02 0.0037 26.1 9.1 71 39-131 78-148 (176)
415 PF00128 Alpha-amylase: Alpha 45.2 17 0.00037 34.9 2.8 32 103-134 42-73 (316)
416 PRK12595 bifunctional 3-deoxy- 44.9 1.4E+02 0.0031 30.3 9.3 60 78-138 236-299 (360)
417 PF07131 DUF1382: Protein of u 40.1 73 0.0016 23.2 4.4 29 407-437 24-52 (61)
418 PF04413 Glycos_transf_N: 3-De 39.9 1.8E+02 0.0039 26.4 8.4 105 4-134 22-127 (186)
419 COG0300 DltE Short-chain dehyd 39.6 3.6E+02 0.0079 26.1 11.3 103 3-122 6-112 (265)
420 PRK12457 2-dehydro-3-deoxyphos 39.2 2.6E+02 0.0055 27.3 9.5 61 74-136 137-201 (281)
421 PRK05198 2-dehydro-3-deoxyphos 38.3 2.3E+02 0.005 27.4 9.0 60 74-136 131-193 (264)
422 TIGR03249 KdgD 5-dehydro-4-deo 38.3 58 0.0013 31.9 5.2 57 69-125 14-70 (296)
423 cd00951 KDGDH 5-dehydro-4-deox 37.6 73 0.0016 31.1 5.8 63 69-131 9-74 (289)
424 cd00408 DHDPS-like Dihydrodipi 37.3 63 0.0014 31.2 5.3 55 68-125 5-62 (281)
425 PRK09441 cytoplasmic alpha-amy 36.8 27 0.00058 36.9 2.7 30 105-134 73-102 (479)
426 COG0329 DapA Dihydrodipicolina 36.0 50 0.0011 32.5 4.4 55 71-125 15-69 (299)
427 cd00950 DHDPS Dihydrodipicolin 35.7 66 0.0014 31.1 5.2 58 68-125 8-65 (284)
428 PF02603 Hpr_kinase_N: HPr Ser 35.5 49 0.0011 28.1 3.7 82 43-132 27-111 (127)
429 cd01991 Asn_Synthase_B_C The C 35.0 2E+02 0.0042 27.2 8.3 104 4-134 18-124 (269)
430 cd01121 Sms Sms (bacterial rad 34.5 5.1E+02 0.011 26.3 11.5 82 40-131 111-205 (372)
431 PRK03620 5-dehydro-4-deoxygluc 34.3 74 0.0016 31.3 5.3 63 69-131 16-81 (303)
432 TIGR03573 WbuX N-acetyl sugar 33.9 5E+02 0.011 26.0 11.6 104 4-136 62-170 (343)
433 TIGR02313 HpaI-NOT-DapA 2,4-di 33.8 82 0.0018 30.9 5.5 57 68-124 8-64 (294)
434 PLN03033 2-dehydro-3-deoxyphos 33.4 2.9E+02 0.0062 27.1 8.8 60 74-136 137-199 (290)
435 COG0296 GlgB 1,4-alpha-glucan 33.0 35 0.00076 37.2 2.9 36 101-136 202-237 (628)
436 PLN02417 dihydrodipicolinate s 32.4 85 0.0018 30.5 5.3 63 69-131 10-75 (280)
437 PF00403 HMA: Heavy-metal-asso 32.0 1.4E+02 0.003 21.2 5.2 52 323-389 9-60 (62)
438 TIGR00683 nanA N-acetylneurami 31.5 86 0.0019 30.6 5.2 57 69-125 9-66 (290)
439 TIGR02026 BchE magnesium-proto 31.5 2.9E+02 0.0064 29.2 9.6 62 66-136 39-102 (497)
440 PF00701 DHDPS: Dihydrodipicol 30.9 61 0.0013 31.5 4.1 62 70-131 11-75 (289)
441 PF02571 CbiJ: Precorrin-6x re 30.9 46 0.001 31.9 3.1 29 109-137 49-77 (249)
442 COG0108 RibB 3,4-dihydroxy-2-b 30.9 1.2E+02 0.0026 28.0 5.5 64 66-130 125-189 (203)
443 PRK09354 recA recombinase A; P 30.7 5.8E+02 0.013 25.8 11.7 86 39-131 88-192 (349)
444 PRK03170 dihydrodipicolinate s 30.4 70 0.0015 31.2 4.4 58 68-125 9-66 (292)
445 PRK04147 N-acetylneuraminate l 30.0 71 0.0015 31.2 4.3 57 69-125 12-69 (293)
446 CHL00073 chlN photochlorophyll 29.9 1E+02 0.0022 32.4 5.6 52 79-132 81-134 (457)
447 cd00983 recA RecA is a bacter 29.8 3.8E+02 0.0082 26.8 9.4 85 40-131 84-187 (325)
448 cd00984 DnaB_C DnaB helicase C 29.8 1.7E+02 0.0037 27.2 6.8 55 76-131 104-168 (242)
449 TIGR00674 dapA dihydrodipicoli 29.7 1.1E+02 0.0023 29.8 5.5 58 68-125 6-63 (285)
450 COG1519 KdtA 3-deoxy-D-manno-o 29.6 3.9E+02 0.0085 27.7 9.5 104 4-133 50-154 (419)
451 TIGR00416 sms DNA repair prote 29.3 4.4E+02 0.0094 27.7 10.3 82 40-131 123-217 (454)
452 PRK08057 cobalt-precorrin-6x r 29.2 54 0.0012 31.4 3.3 31 109-139 48-78 (248)
453 TIGR02402 trehalose_TreZ malto 29.2 42 0.00091 36.1 2.7 30 106-135 153-182 (542)
454 PF04748 Polysacc_deac_2: Dive 29.0 3.5E+02 0.0076 25.1 8.6 89 42-133 25-125 (213)
455 PF02310 B12-binding: B12 bind 28.1 3.2E+02 0.007 22.0 7.7 68 55-136 22-91 (121)
456 cd00954 NAL N-Acetylneuraminic 28.1 1.2E+02 0.0025 29.6 5.5 63 69-131 9-75 (288)
457 PF05913 DUF871: Bacterial pro 28.1 80 0.0017 32.0 4.4 58 79-136 12-70 (357)
458 PF13607 Succ_CoA_lig: Succiny 28.0 3.9E+02 0.0085 23.0 10.9 111 4-130 4-125 (138)
459 TIGR02826 RNR_activ_nrdG3 anae 27.9 1.4E+02 0.003 26.1 5.3 53 75-133 43-95 (147)
460 PF03162 Y_phosphatase2: Tyros 27.5 1E+02 0.0022 27.5 4.5 68 42-112 36-108 (164)
461 PF00926 DHBP_synthase: 3,4-di 27.4 2E+02 0.0043 26.5 6.4 64 66-130 121-185 (194)
462 PRK11823 DNA repair protein Ra 27.3 5E+02 0.011 27.1 10.3 82 40-131 109-203 (446)
463 COG0648 Nfo Endonuclease IV [D 26.9 3.7E+02 0.008 26.3 8.5 80 55-138 94-181 (280)
464 PRK08335 translation initiatio 26.9 5.8E+02 0.013 24.8 9.9 23 109-131 191-216 (275)
465 PRK12313 glycogen branching en 26.5 51 0.0011 36.1 2.9 27 108-134 215-241 (633)
466 TIGR00511 ribulose_e2b2 ribose 26.5 4.6E+02 0.0099 25.8 9.3 102 2-132 115-223 (301)
467 COG1184 GCD2 Translation initi 26.4 6.4E+02 0.014 24.9 10.9 100 2-131 119-226 (301)
468 PF03796 DnaB_C: DnaB-like hel 26.0 2.3E+02 0.005 26.8 7.1 55 77-131 111-175 (259)
469 KOG3974|consensus 25.9 1.7E+02 0.0037 28.3 5.7 48 79-133 91-139 (306)
470 PRK12481 2-deoxy-D-gluconate 3 25.8 5.4E+02 0.012 23.9 10.1 87 3-107 8-94 (251)
471 TIGR02329 propionate_PrpR prop 25.8 7.1E+02 0.015 26.7 11.3 47 40-94 99-145 (526)
472 PRK08673 3-deoxy-7-phosphohept 25.7 5.4E+02 0.012 25.8 9.7 62 77-139 210-275 (335)
473 TIGR03581 EF_0839 conserved hy 25.6 1.5E+02 0.0032 27.9 5.1 69 52-131 136-207 (236)
474 TIGR00288 conserved hypothetic 25.5 2.9E+02 0.0063 24.6 6.9 77 42-133 60-136 (160)
475 PRK05402 glycogen branching en 25.3 54 0.0012 36.6 2.8 30 106-135 308-337 (726)
476 TIGR00381 cdhD CO dehydrogenas 24.9 3.5E+02 0.0076 27.7 8.1 51 74-133 197-247 (389)
477 PRK10785 maltodextrin glucosid 24.9 54 0.0012 35.7 2.7 56 79-134 177-247 (598)
478 COG2052 Uncharacterized protei 24.1 1.5E+02 0.0032 22.8 4.1 33 97-136 17-49 (89)
479 PRK13398 3-deoxy-7-phosphohept 24.0 4E+02 0.0086 25.7 8.2 62 77-139 144-209 (266)
480 PRK08535 translation initiatio 23.9 5.4E+02 0.012 25.4 9.3 102 2-132 120-228 (310)
481 TIGR00506 ribB 3,4-dihydroxy-2 23.8 2.8E+02 0.0061 25.6 6.7 64 66-130 126-190 (199)
482 PRK05876 short chain dehydroge 23.6 6E+02 0.013 24.0 9.6 43 66-111 56-98 (275)
483 COG1954 GlpP Glycerol-3-phosph 23.2 1.4E+02 0.003 26.9 4.4 49 79-138 12-62 (181)
484 PLN03244 alpha-amylase; Provis 23.1 66 0.0014 36.0 2.8 32 104-135 432-463 (872)
485 COG0367 AsnB Asparagine syntha 23.1 3.1E+02 0.0067 29.5 7.9 102 3-133 232-339 (542)
486 TIGR01515 branching_enzym alph 23.1 63 0.0014 35.3 2.8 28 108-135 201-228 (613)
487 TIGR02012 tigrfam_recA protein 23.0 7.6E+02 0.016 24.6 10.6 85 40-131 84-187 (321)
488 smart00839 ELFV_dehydrog Gluta 22.9 3.6E+02 0.0077 21.8 6.6 58 380-441 39-100 (102)
489 smart00481 POLIIIAc DNA polyme 22.8 3E+02 0.0064 19.9 5.7 47 75-130 12-58 (67)
490 PLN00196 alpha-amylase; Provis 22.6 63 0.0014 33.6 2.5 28 107-134 86-113 (428)
491 cd07021 Clp_protease_NfeD_like 22.4 2.1E+02 0.0045 25.8 5.6 77 80-169 15-94 (178)
492 PRK05678 succinyl-CoA syntheta 22.3 2.7E+02 0.0058 27.3 6.7 72 45-130 49-120 (291)
493 PRK06114 short chain dehydroge 22.3 6.2E+02 0.014 23.3 9.7 88 4-107 9-97 (254)
494 cd01984 AANH_like Adenine nucl 22.3 2.3E+02 0.005 21.4 5.2 54 76-138 7-60 (86)
495 PF01972 SDH_sah: Serine dehyd 22.3 2.6E+02 0.0056 27.3 6.3 74 79-167 76-152 (285)
496 cd00952 CHBPH_aldolase Trans-o 21.7 1.6E+02 0.0034 29.1 5.1 56 75-130 23-81 (309)
497 TIGR01244 conserved hypothetic 21.6 5E+02 0.011 22.0 7.8 68 54-127 50-126 (135)
498 PF01645 Glu_synthase: Conserv 21.6 6.7E+02 0.015 25.5 9.5 9 155-163 228-236 (368)
499 PRK05872 short chain dehydroge 21.5 7.2E+02 0.016 23.8 9.9 93 3-112 9-101 (296)
500 COG0352 ThiE Thiamine monophos 21.1 2E+02 0.0044 26.8 5.3 48 80-133 24-72 (211)
No 1
>KOG0629|consensus
Probab=100.00 E-value=6.2e-55 Score=422.67 Aligned_cols=349 Identities=55% Similarity=0.969 Sum_probs=325.0
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
.+|+|+|||+.||++++.+||.+..|+.|..|....|..++++|+.+|||+.++++.+|+|..+++.|++++.|.|++++
T Consensus 160 ~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e~Gkm~~~d 239 (510)
T KOG0629|consen 160 GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDERGKMIPDD 239 (510)
T ss_pred CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEecccccCccchHH
Confidence 58999999999999999999999999999999998899999999999999999999999999899999999999999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
||+.|.+.++.|..|.+|.++.++|+.|++|||..|+++|++|+.|+|||+|+|+|.+.....+..+.|++.+||++.++
T Consensus 240 Le~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~Svtwnp 319 (510)
T KOG0629|consen 240 LEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNP 319 (510)
T ss_pred HHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccCceeecH
Confidence 99999998888888999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
||++++|-.|+.++.|.+
T Consensus 320 HK~~gaplqCsa~l~r~~-------------------------------------------------------------- 337 (510)
T KOG0629|consen 320 HKLMGAPLQCSAFLTREE-------------------------------------------------------------- 337 (510)
T ss_pred HHhhcCcchhhHHHHHHH--------------------------------------------------------------
Confidence 999999999988665443
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 322 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 322 (448)
+++.+-|++.|.|+||++|+||+++|+++|..||+|.+|.+++|.+|+.+|-+|+++.+++
T Consensus 338 -------------------gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k 398 (510)
T KOG0629|consen 338 -------------------GLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDK 398 (510)
T ss_pred -------------------HHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHH
Confidence 2344567888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCeEEec-cCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCc
Q psy14299 323 AVDCSRYFLSQISQRPGFRLVI-PEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHR 401 (448)
Q Consensus 323 ~~~l~~~~~~~L~~~pg~~l~~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~ 401 (448)
+.++++|+.++|++.++++.+. .+|+..+++|+++|+.+.......++..++.++...|.+.+.++|..++++.+...+
T Consensus 399 ~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~ 478 (510)
T KOG0629|consen 399 CLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDK 478 (510)
T ss_pred HHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccc
Confidence 9999999999999999988763 347889999999999998887778899999999999999999999999998877665
Q ss_pred ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 402 NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 402 ~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
++.+|..+. ++..+.+|+|.+++.|+.+.++
T Consensus 479 --~nffr~v~s-n~a~~~ad~dflldEIerlgq~ 509 (510)
T KOG0629|consen 479 --PNFFRMVIS-NPALTEADLDFLLDEIERLGQD 509 (510)
T ss_pred --cchhheecc-cchhhhhhHHHHHHHHHHhccC
Confidence 579999998 7888999999999999988764
No 2
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=1.5e-53 Score=444.87 Aligned_cols=340 Identities=26% Similarity=0.402 Sum_probs=300.6
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMIC 80 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~ 80 (448)
++|+||+||||||++|+.+||.+..+ +.|..+.++.+||+|+.+|+|+.|+++++|++..+++.||++. +++||+
T Consensus 195 ~gG~~~sGgSeAnl~al~aAR~~~~~---~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~ 271 (539)
T PLN02590 195 GGGVIQGTGCEAVLVVVLAARDRILK---KVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPP 271 (539)
T ss_pred CceEEcCchHHHHHHHHHHHHHHHHh---hhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCH
Confidence 67999999999999999999987542 2344334778999999999999999999999887899999984 579999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
++|+++|+++.+++..|.+|+.+.++|.+|.+|||++|+++|++||+|+|||||+|+.++++++.+..+.+++.|||+++
T Consensus 272 ~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~ 351 (539)
T PLN02590 272 ESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNM 351 (539)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEE
Confidence 99999999988888999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred CCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
++||||++|++||++++|++..+...+...+.|+.......+..+++.+++++++||++++++|++++.+|.+|++++|+
T Consensus 352 D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~ 431 (539)
T PLN02590 352 NAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIR 431 (539)
T ss_pred CchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998777777777888985432223345788999999999999999999999999999998666
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
+.+
T Consensus 432 ~~~----------------------------------------------------------------------------- 434 (539)
T PLN02590 432 DHV----------------------------------------------------------------------------- 434 (539)
T ss_pred HHH-----------------------------------------------------------------------------
Confidence 554
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCC
Q psy14299 321 DNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQH 400 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g 400 (448)
+++++|.+.|++.|+|+++ .++.+++|||++.|++.. + +..+.++.++.++|.+.|.++++++.++|
T Consensus 435 ----~lA~~~~~~l~~~~~fel~-~~~~l~iVcFr~~~~~~~-----~---~~~~~ln~~l~~~l~~~G~~~vs~t~~~g 501 (539)
T PLN02590 435 ----NLAKHFEDYVAQDPSFEVV-TTRYFSLVCFRLAPVDGD-----E---DQCNERNRELLAAVNSTGKIFISHTALSG 501 (539)
T ss_pred ----HHHHHHHHHHhcCCCeEEe-cCCceEEEEEEecCCCCC-----H---HHHHHHHHHHHHHHHhCCCEEEEeeEECC
Confidence 4599999999999999999 889999999999875432 1 23566788999999999999999999999
Q ss_pred cccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHHh
Q psy14299 401 RNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDLE 439 (448)
Q Consensus 401 ~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~~ 439 (448)
+ .+||++++ |+.|+++||+.+++.|.+.++++.++
T Consensus 502 ~---~~lR~~i~-n~~T~~~dv~~~~~~i~~~a~~~~~~ 536 (539)
T PLN02590 502 K---FVLRFAVG-APLTEEKHVTEAWQIIQKHASKFTRN 536 (539)
T ss_pred E---EEEEEEec-CCCCCHHHHHHHHHHHHHHHHHhccc
Confidence 8 89999999 89999999999999999998877643
No 3
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=2.9e-51 Score=427.11 Aligned_cols=339 Identities=23% Similarity=0.390 Sum_probs=294.9
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMIC 80 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~ 80 (448)
++|++|+|||+||++|+.+||++..+ +.|..+.++.+||+|+.+|+|+.|+|+++|++..+++.||++. +++||+
T Consensus 147 ~gG~~tsggs~anl~al~~AR~~~~~---~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~ 223 (490)
T PLN02880 147 GGGVIQGTASEAVLVVLLAARDRVLR---KVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAP 223 (490)
T ss_pred CceEEcCccHHHHHHHHHHHHHHHHH---HhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCH
Confidence 57999999999999999999987432 2233333567899999999999999999999877799999975 579999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
++|+++|+++.+++..|.+|+.+.++|.+|.+||+++|+++|++||+|+|||||||++.+..+.++..+.+++.+||+++
T Consensus 224 ~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~ 303 (490)
T PLN02880 224 ELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNM 303 (490)
T ss_pred HHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEE
Confidence 99999999988888899999999999999999999999999999999999999999999988888888899989999999
Q ss_pred CCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
++|||+++|.+||++++|++..+...+...+.|+..........+++.+++++++||++++++|+.++.+|.+|++++++
T Consensus 304 d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~ 383 (490)
T PLN02880 304 NAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIR 383 (490)
T ss_pred CchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHH
Confidence 99999999999999999987666566667788887643333345678889999999999999999999999999888666
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
+.
T Consensus 384 ~~------------------------------------------------------------------------------ 385 (490)
T PLN02880 384 NH------------------------------------------------------------------------------ 385 (490)
T ss_pred HH------------------------------------------------------------------------------
Confidence 54
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCC
Q psy14299 321 DNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQH 400 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g 400 (448)
.++++++.+.|++.|+|+++ .++.+++++|++.|.... + +..+.++.++.++|.+.|.+++..+.++|
T Consensus 386 ---~~lA~~~~~~l~~~~~~el~-~~~~~~iv~Fr~~~~~~~-----~---~~~~~~n~~l~~~l~~~g~~~v~~t~~~g 453 (490)
T PLN02880 386 ---IKLAKEFEQLVAQDSRFEVV-TPRIFSLVCFRLVPPKNN-----E---DNGNKLNHDLLDAVNSSGKIFISHTVLSG 453 (490)
T ss_pred ---HHHHHHHHHHHhcCCCEEEe-cCCceEEEEEEEeCCCCC-----h---hhHHHHHHHHHHHHHhCCCEEEEEEEECC
Confidence 45689999999999999999 888999999998764332 1 23466778999999999999999999999
Q ss_pred cccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHH
Q psy14299 401 RNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDL 438 (448)
Q Consensus 401 ~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~ 438 (448)
+ .++|+|++ ++.++++|++++++.|+++++++..
T Consensus 454 ~---~~lR~~~~-n~~tt~~di~~~~~~i~~~~~~~~~ 487 (490)
T PLN02880 454 K---YVLRFAVG-APLTEERHVTAAWKVLQDEASKLLG 487 (490)
T ss_pred E---EEEEEEec-CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 8 89999998 8999999999999999999887643
No 4
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=3.4e-47 Score=397.54 Aligned_cols=337 Identities=29% Similarity=0.487 Sum_probs=277.2
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCc------ccccCCC------CCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEE
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPD------TKRKGLS------HLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRV 70 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~------~~~~G~~------~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v 70 (448)
++|+||+|||+||++|+++||++..+. .++.|+. +.++.+||+++.+|+|+.++++.+|++..+++.|
T Consensus 160 ~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~v 239 (522)
T TIGR03799 160 SLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAI 239 (522)
T ss_pred CCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEE
Confidence 579999999999999999999875421 3344543 1256789999999999999999999977779999
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhc
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
|++++|+||+++|+++|+++.+++.++..|+.++++|.+|.++|+++|+++|++||+|+|||+||+++.++.++.+..+.
T Consensus 240 p~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~ 319 (522)
T TIGR03799 240 KTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLK 319 (522)
T ss_pred EeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhc
Confidence 99999999999999999987777777888899999999999999999999999999999999999999888888888888
Q ss_pred CCCCccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHh
Q psy14299 151 GINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKAR 230 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (448)
+++.+|++++|+|||+++|.|||++++|++..+. .+...+.|+.... ..+++.++++++|++.++++|++++.+
T Consensus 320 gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~-~~~~~~~Yl~~~~-----~~d~~~~~legsR~~~al~lw~aL~~l 393 (522)
T TIGR03799 320 GIERADSVTIDAHKQLYVPMGAGMVLFKDPALMS-AIEHHAEYILRKG-----SKDLGSHTLEGSRPGMAMLVYAGLHII 393 (522)
T ss_pred CchhCCEEEEChhhcCCcCcccEEEEEeCHHHHH-HhccCcchhcCCC-----CCccccceeecCcchHHHHHHHHHHHH
Confidence 8888999999999999999999999999876543 3455567874322 234667788889888877788777777
Q ss_pred ChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHH
Q psy14299 231 GNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKA 310 (448)
Q Consensus 231 g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (448)
|..|+++
T Consensus 394 G~~G~~~------------------------------------------------------------------------- 400 (522)
T TIGR03799 394 GRKGYEL------------------------------------------------------------------------- 400 (522)
T ss_pred hHHHHHH-------------------------------------------------------------------------
Confidence 6666665
Q ss_pred hcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCcccc------chhhhhhhhhhhHHHHHH
Q psy14299 311 RGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVE------DETWWSTLSKVAPRIKEK 384 (448)
Q Consensus 311 ~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~~ 384 (448)
++++..+++++|.+.|++.|+|+++ .+|..++++|++.|+++..... .+...+.++.++..+.++
T Consensus 401 --------ii~~~~~la~~l~~~L~~~~~~el~-~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~ 471 (522)
T TIGR03799 401 --------LIDQSIEKAKYFADLIQQQPDFELV-TEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKR 471 (522)
T ss_pred --------HHHHHHHHHHHHHHHHhhCCCeEEe-cCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHH
Confidence 5566677799999999999999999 8889999999998876542210 011224567888999999
Q ss_pred HHhCCcEEEEeeecCCc----ccccEEEEEecCCCCCCHHHHHHHHHH
Q psy14299 385 LVLGGTLMIGYQPLQHR----NLHNFFRLVTTCHPASSRQDMDYAIDQ 428 (448)
Q Consensus 385 L~~~g~~~~~~~~~~g~----~~~~~lRis~~~~~~~t~edid~l~~a 428 (448)
+.+.|..+++.+...+. .+..++|++++ |+.||++||+.+++-
T Consensus 472 ~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~-np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 472 QREAGKSFVSRTRLTPAQYDHQPTVVFRVVLA-NPLTTHEILQDILDE 518 (522)
T ss_pred HHhcCCEEEEEEEecccccCCCCcEEEEEEec-CCCCCHHHHHHHHHH
Confidence 99999999998876521 01257999999 999999999998764
No 5
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=1.6e-44 Score=364.86 Aligned_cols=269 Identities=40% Similarity=0.717 Sum_probs=232.3
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
++|+||+|||+||++|+.+||++..++.+..|....++.+||+|+.+|+|+.++|+++|+ .++.||++++++||+++
T Consensus 104 ~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGl---g~~~I~~~~~~~md~~~ 180 (373)
T PF00282_consen 104 AGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGL---GVRKIPTDEDGRMDIEA 180 (373)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTS---EEEEE-BBTTSSB-HHH
T ss_pred CceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceeee---EEEEecCCcchhhhHHH
Confidence 689999999999999999999987666666664323567899999999999999999999 59999999999999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
|+++|+++.++|..|.+|+.+.++|.+|.+||+++|+++|+++++|+|||+|+|+..+..+..+....+++.+||+++++
T Consensus 181 L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~ 260 (373)
T PF00282_consen 181 LEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDP 260 (373)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEET
T ss_pred hhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccccccccccccccccccccccccccch
Confidence 99999998888878889999999999999999999999999999999999999998888888888889999999999999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
|||+++|++||++++|++..+...+...+.|+.......+...++.+++++++|+++++++|+.++.+|.+|+++++++.
T Consensus 261 HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~ 340 (373)
T PF00282_consen 261 HKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRC 340 (373)
T ss_dssp TTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHH
Confidence 99999999999999999987777776788999865544556677888999999999999999999999999998866654
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 322 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 322 (448)
+
T Consensus 341 ~------------------------------------------------------------------------------- 341 (373)
T PF00282_consen 341 I------------------------------------------------------------------------------- 341 (373)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred H-------------------------------------------------------------------------------
Confidence 4
Q ss_pred HHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEe
Q psy14299 323 AVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWF 356 (448)
Q Consensus 323 ~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~ 356 (448)
++++++.+.|++.|+|+++ .++..++|||++
T Consensus 342 --~~a~~l~~~l~~~~~~el~-~~~~~~~vcFr~ 372 (373)
T PF00282_consen 342 --ELARYLADRLRKDPRFELV-NEPDLNIVCFRY 372 (373)
T ss_dssp --HHHHHHHHHHHTSTTEEES-STTSSSEEEEEE
T ss_pred --HHHHHHHHHHHhCCCEEEE-cCCCceEEEEEe
Confidence 4599999999999999999 899999999986
No 6
>KOG0628|consensus
Probab=100.00 E-value=6.4e-41 Score=328.68 Aligned_cols=330 Identities=26% Similarity=0.408 Sum_probs=296.3
Q ss_pred CccEEEeCcHHHHHHHHHHHHHHhcCCcccccC--C---CCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCC
Q psy14299 2 NLKPFLLPGGSISNMYSICLARYRLDPDTKRKG--L---SHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERG 76 (448)
Q Consensus 2 ~~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G--~---~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g 76 (448)
+++|++-.++|+++++++.+||.....+++..- + .-..+.++|+|+++|.|+.++|.+.++ +++.++.+.+.
T Consensus 139 ~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~V---klR~l~td~n~ 215 (511)
T KOG0628|consen 139 DGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGV---KLRALPTDENF 215 (511)
T ss_pred CCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcce---eEEEeecccCc
Confidence 578999999999999999999987654443321 0 013567899999999999999999999 79999999999
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCcc
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRAN 156 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD 156 (448)
.|+.+.|.++|+++.++|..|..|+++.|+|.+..+|+|++|+.+|+++|+|+|||+||++.++.+++.+....|++.||
T Consensus 216 ~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aD 295 (511)
T KOG0628|consen 216 GMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYAD 295 (511)
T ss_pred CCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHH
Q psy14299 157 SVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 236 (448)
Q Consensus 157 ~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~ 236 (448)
++.+++|||+.....|+.|++++...+...++..+-|+..... ....|+++|.++.+|||+++++|++++.+|.++++
T Consensus 296 Sfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~--~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq 373 (511)
T KOG0628|consen 296 SFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQ--GSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQ 373 (511)
T ss_pred cccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhh--ccCCCccccccccccchhhHHHHHHHHHHhHHHHH
Confidence 9999999999999999999999997788877788888865442 34789999999999999999999999999999999
Q ss_pred HHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccH
Q psy14299 237 HFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 316 (448)
Q Consensus 237 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 316 (448)
++++++.+
T Consensus 374 ~~iR~h~~------------------------------------------------------------------------ 381 (511)
T KOG0628|consen 374 NYIREHVR------------------------------------------------------------------------ 381 (511)
T ss_pred HHHHHHHH------------------------------------------------------------------------
Confidence 97776554
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee
Q psy14299 317 RHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ 396 (448)
Q Consensus 317 ~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~ 396 (448)
|++.|.+.+.+-|.|+++ .+...+.+|||..+. |..++++++++...|.+++.+.
T Consensus 382 ---------La~~fe~lv~~d~~FE~~-~~~~lgLvcFRlk~~---------------N~~ne~Ll~~in~~g~i~l~~~ 436 (511)
T KOG0628|consen 382 ---------LAKEFETLVRADPRFEIV-NKRILGLVCFRLKGD---------------NEINEALLNRLNSSGRIHLVPA 436 (511)
T ss_pred ---------HHHHHHHHhhcCCcceee-cccccceeEEeecCC---------------cHHHHHHHHHHHhcCcEEEEEe
Confidence 588999999999999998 888899999997542 4567899999999999999999
Q ss_pred ecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 397 PLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 397 ~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
.+.|+ ..+|++++ +..++++||++..+.|.+.+.++.
T Consensus 437 ~l~gk---~vlRf~V~-s~~t~~~di~~a~~~I~~~a~~l~ 473 (511)
T KOG0628|consen 437 SLHGK---FVLRFAVC-SPLTNESDIDEAWKIIFEAADELF 473 (511)
T ss_pred eecce---EEEEEEec-CCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99998 89999998 899999999999999999887754
No 7
>PLN02263 serine decarboxylase
Probab=100.00 E-value=1.8e-39 Score=331.41 Aligned_cols=286 Identities=22% Similarity=0.379 Sum_probs=232.8
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
.+|++|+||||||++|+++||+.. ++.++|+|+.+|+|+.|+++++|+ +++.||++++++||+++
T Consensus 153 ~~G~vtsGGTEaNL~Al~aARe~~------------~~~vvy~S~~aH~Sv~KAa~llgi---~~~~Vp~d~~g~mD~~a 217 (470)
T PLN02263 153 YWGYITNCGTEGNLHGILVGREVF------------PDGILYASRESHYSVFKAARMYRM---ECVKVDTLVSGEIDCAD 217 (470)
T ss_pred CeEEEeCcHHHHHHHHHHHHHhhc------------CCcEEEEcCCccHHHHHHHHhcCC---cceEeccCCCCcCcHHH
Confidence 479999999999999999999862 455799999999999999999999 78999999999999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCC-----EEEEecccccccccccchhhhhcCCCCccE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDL-----WMHVDACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~-----~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
|+++|.++ ..+|.+|+.+.|+|++|.+|||++|+++|++||+ |+|||||+|+..++.-.....++....+||
T Consensus 218 L~~aI~~d---~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~vDS 294 (470)
T PLN02263 218 FKAKLLAN---KDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGS 294 (470)
T ss_pred HHHHHHhC---CCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCcCccE
Confidence 99999764 2368899999999999999999999999999997 999999999988855433333445556999
Q ss_pred EEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCc-hhHHHHHHHHHhChHHHH
Q psy14299 158 VSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKV-DAFKLWLMWKARGNLGFR 236 (448)
Q Consensus 158 ~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~g~~ 236 (448)
+++|+|||+++|.+||++++|++. + ..++..+.|+...+ .++.++|++ .++++|++++.+|.+|++
T Consensus 295 IsvD~HK~l~~P~~cgvll~R~~~-~-~~~~~~~~Yl~~~d-----------~ti~gSR~g~~al~lW~~L~~~G~~G~~ 361 (470)
T PLN02263 295 VSVSGHKFVGCPMPCGVQITRMEH-I-NVLSSNVEYLASRD-----------ATIMGSRNGHAPIFLWYTLNRKGYRGFQ 361 (470)
T ss_pred EEECCccccCCCcCEEEEEEehhh-H-hhhccChHhhCCCC-----------CCcCCCCCcHHHHHHHHHHHHhCHHHHH
Confidence 999999999999999999999753 2 34456678886532 357889997 478999999999999988
Q ss_pred HHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccH
Q psy14299 237 HFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 316 (448)
Q Consensus 237 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 316 (448)
+.+++.
T Consensus 362 ~~i~~~-------------------------------------------------------------------------- 367 (470)
T PLN02263 362 KEVQKC-------------------------------------------------------------------------- 367 (470)
T ss_pred HHHHHH--------------------------------------------------------------------------
Confidence 866654
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee
Q psy14299 317 RHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ 396 (448)
Q Consensus 317 ~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~ 396 (448)
.++++++.++|+++ |++++ ..|..++++|+. | . +....+|+... .
T Consensus 368 -------~~~A~~l~~~l~~~-g~~~~-~~p~s~~V~f~~-p---~--------------------~~~~~~gW~L~-~- 412 (470)
T PLN02263 368 -------LRNAHYLKDRLREA-GISAM-LNELSSTVVFER-P---K--------------------DEEFVRRWQLA-C- 412 (470)
T ss_pred -------HHHHHHHHHHHHhC-CCeEE-eCCCceEEEEec-C---c--------------------hHHhhcceEEc-c-
Confidence 45589999999998 88877 678889999863 1 0 11134564322 2
Q ss_pred ecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 397 PLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 397 ~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
.+ ..+|+++| +..+++.+|.|++.|++..+..
T Consensus 413 --~~----~~~Hivvm--phv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 413 --QG----NIAHVVVM--PSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred --CC----CcEEEEEc--CCCCHHHHHHHHHHHHHHHhhh
Confidence 11 46999996 6778999999999999887754
No 8
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=2.8e-39 Score=331.55 Aligned_cols=315 Identities=16% Similarity=0.181 Sum_probs=240.7
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-CCcCHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-GQMICS 81 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-g~id~e 81 (448)
..|++|+||||||++|+.+++.+...+.++.|.. .++..||+++.+|+|+.++++++|+ +++.||++++ +.+|++
T Consensus 102 ~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~-~~~~~ii~s~~~H~sv~ka~~~lg~---~v~~i~~d~~~~~vd~~ 177 (431)
T TIGR01788 102 AVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKP-TDKPNLVMGSNVQVCWEKFARYFDV---ELREVPMDPGRYVIDPE 177 (431)
T ss_pred CeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCcEEEEcCcchHHHHHHHHHcCc---eeEEEecCCCceeeCHH
Confidence 4567799999999999988875321111222221 1245799999999999999999998 7999999876 599999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc------CCEEEEecccccccccc--cchhhhhcCCC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY------DLWMHVDACWGGSLIFS--EKYSFVLKGIN 153 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~------g~~l~VD~A~~~~~~~~--~~~~~~~~~~~ 153 (448)
+|+++|++ .+.+|++++++|.+|.++|+++|+++|+++ |+|+|||+||++++.++ +..+..+. +.
T Consensus 178 ~L~~~i~~------~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~-~~ 250 (431)
T TIGR01788 178 QVVEAVDE------NTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR-LP 250 (431)
T ss_pred HHHHHHhh------CCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC-CC
Confidence 99999976 478999999999999999999999999999 99999999999887643 33333333 56
Q ss_pred CccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCc-hhHHHHHHHHHhCh
Q psy14299 154 RANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKV-DAFKLWLMWKARGN 232 (448)
Q Consensus 154 ~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~ 232 (448)
.+|++++|+|||+++|+|+|++++|++..+...+...+.|+.... .+.+++++|++ .+++.|+.++.+|.
T Consensus 251 ~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~---------~~~t~~~sR~g~~al~~w~~l~~lG~ 321 (431)
T TIGR01788 251 RVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDE---------PTFTLNFSRPANQVIAQYYNFLRLGR 321 (431)
T ss_pred CceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCC---------CCcceecCchHHHHHHHHHHHHHhcH
Confidence 799999999999999999999999987544444444566764321 12456667764 44555655555554
Q ss_pred HHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhc
Q psy14299 233 LGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARG 312 (448)
Q Consensus 233 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (448)
.
T Consensus 322 ~------------------------------------------------------------------------------- 322 (431)
T TIGR01788 322 E------------------------------------------------------------------------------- 322 (431)
T ss_pred H-------------------------------------------------------------------------------
Confidence 4
Q ss_pred CccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccC-CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcE
Q psy14299 313 NLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPE-FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTL 391 (448)
Q Consensus 313 ~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~ 391 (448)
|++++.++..++++++.++|+++|+|+++ .+ +..++++|++.+.+- .+..+.++.++|.++|+.
T Consensus 323 --G~~~i~~~~~~la~~l~~~L~~~~~~el~-~~~~~~~iV~Fr~~~~~~------------~~~~~~~l~~~L~~~G~~ 387 (431)
T TIGR01788 323 --GYRKIMQNSLDVARYLAEEIAKLGPFEII-SDGSGIPLVAFKLKDDAD------------PGYTLYDLSHRLRERGWI 387 (431)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhCCCEEEe-eCCCCceEEEEEeCCCCC------------CCcCHHHHHHHHHHCCCc
Confidence 55556677788899999999999999999 65 789999999865320 011235789999999965
Q ss_pred EE---EeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 392 MI---GYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 392 ~~---~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
+. .|..+.|. .++|++++ +..+++.++.+++.|+++...+
T Consensus 388 ~~~~~~p~~~~~~---~~lR~~~~--~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 388 VPAYTLPKNAEDI---VVMRIVVR--EGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred ccCCCCCCccCCe---EEEEEEec--CCCCHHHHHHHHHHHHHHHHhh
Confidence 43 33345565 78999995 7889999999999999988654
No 9
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=3.2e-38 Score=332.65 Aligned_cols=340 Identities=22% Similarity=0.288 Sum_probs=257.2
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhc-CC----cc-----------------------------------cccC----CCCC
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRL-DP----DT-----------------------------------KRKG----LSHL 38 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~-~~----~~-----------------------------------~~~G----~~~~ 38 (448)
.+|+||+|||+||+.|+++||+.. .| +. ++.+ ....
T Consensus 141 ~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~ 220 (608)
T TIGR03811 141 GWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQ 220 (608)
T ss_pred CCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccc
Confidence 579999999999999999999853 11 00 0001 0001
Q ss_pred CCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHH
Q psy14299 39 PPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEI 118 (448)
Q Consensus 39 ~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I 118 (448)
+-.++++|..+|+|+.|++.++|++..+++.||+|++++||+++|++.|+++.+++..|..|+.+.|+|.+|.+|||++|
T Consensus 221 ~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI 300 (608)
T TIGR03811 221 KLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKI 300 (608)
T ss_pred cceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHH
Confidence 11269999999999999999999998889999999999999999999999988888788899999999999999999999
Q ss_pred HHHH---HHcCC--EEEEeccccccc--ccc------------------------------cchhhhhcCCCCccEEEEC
Q psy14299 119 ATVC---EKYDL--WMHVDACWGGSL--IFS------------------------------EKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 119 ~~ia---~~~g~--~l~VD~A~~~~~--~~~------------------------------~~~~~~~~~~~~aD~~~~s 161 (448)
+++| +++|+ |+|||||+|+.. ++. ++....+.+++.|||++++
T Consensus 301 ~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvD 380 (608)
T TIGR03811 301 VALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTID 380 (608)
T ss_pred HHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeC
Confidence 9999 67898 699999999964 222 2334567789999999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCC-chhHHHHHHHHHh--ChHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRK-VDAFKLWLMWKAR--GNLGFRHF 238 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--g~~g~~~~ 238 (448)
+|||++.|++||++++|++. +....+..++|++..... .....+.++++++|+ ++++++|++++.+ |.+|+.+.
T Consensus 381 pHK~g~~Py~~G~ll~Rd~~-~~~~~~~~a~Yl~~~~~~--~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~ 457 (608)
T TIGR03811 381 PHKMGYIPYSAGGIVIQDIR-MRDVISYFATYVFEKGAD--IPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKL 457 (608)
T ss_pred cccccccCCCeEEEEEeCHH-HHHHHhcCcchhcccccc--CcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHH
Confidence 99999999999999999986 455556788998753321 112456677777876 5688899998887 78888876
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
+++
T Consensus 458 i~~----------------------------------------------------------------------------- 460 (608)
T TIGR03811 458 IGA----------------------------------------------------------------------------- 460 (608)
T ss_pred HHH-----------------------------------------------------------------------------
Confidence 555
Q ss_pred HHHHHHHHHHHHHHHhhc------CCCeEE--eccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHH-h--
Q psy14299 319 FVDNAVDCSRYFLSQISQ------RPGFRL--VIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV-L-- 387 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~------~pg~~l--~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-~-- 387 (448)
..++++++.+.|.+ .|.|++ + .+|..++++|++.|++.++ .+..|..+.++.+++- .
T Consensus 461 ----~i~~A~~~~~~L~~~~~~~~~~~~el~~~-~~pdlniV~Fr~~~~g~~~-------l~~~n~ln~~i~~~~~~~~g 528 (608)
T TIGR03811 461 ----SIEGAHRFYDFLNNLEFKVGDKEIEVHPL-TKPDFNMVDYVFNEKGNDD-------LVKMNKLNHAFYDYASYVKG 528 (608)
T ss_pred ----HHHHHHHHHHHHHhcccccCCCCeeEEec-CCCCcceEEEEEecCCCcc-------HHHHHHHHHHHHHhhccccC
Confidence 44558888888888 466776 6 7899999999998876432 2356777778888876 1
Q ss_pred ---CCcEEEEeeecC---------------Cc--------ccccEEEEEecCCCCCCH-HHHHHHHHHHHHHHHH
Q psy14299 388 ---GGTLMIGYQPLQ---------------HR--------NLHNFFRLVTTCHPASSR-QDMDYAIDQIELRGAE 435 (448)
Q Consensus 388 ---~g~~~~~~~~~~---------------g~--------~~~~~lRis~~~~~~~t~-edid~l~~al~~~~~~ 435 (448)
..-++++.+.+. |- ..-..+|.++| +++.++ +-++.+++.|+++..+
T Consensus 529 ~~~~~~~~~s~t~~~~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~m-~p~~~~~~~~~~~~~~~~~~~~~ 602 (608)
T TIGR03811 529 SIYNNEFITSHTDFAIPDYGDSPFAFVNSLGFSDEEWQRAGKVTILRASVM-TPYMNDKENFDEYAPKIKAAMQE 602 (608)
T ss_pred CCCCcceEeeecccccchhhhhHHHHHHHcCCChhhhccCCceEEEEEEec-CcccCChhhHHHHHHHHHHHHHH
Confidence 111333322111 10 01147999999 677555 6688888888877654
No 10
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=1.5e-37 Score=312.65 Aligned_cols=282 Identities=22% Similarity=0.360 Sum_probs=223.3
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
.+|+||+||||||++|+.++|+.. ++.+|+++..+|+|+.++++++|+ .++.||++++|++|+++
T Consensus 86 ~~G~fTsGGTEaNl~al~~ar~~~------------~~~~vi~s~~~H~Sv~kaa~~lg~---~~~~V~~d~~g~id~~~ 150 (374)
T PLN03032 86 YWGYITTCGTEGNLHGILVGREVF------------PDGILYASRESHYSVFKAARMYRM---EAVKVPTLPSGEIDYDD 150 (374)
T ss_pred CCEEEeCchHHHHHHHHHHHHHhC------------CCcEEEeCCCceeHHHHHHHHcCC---CCeEeeeCCCCcCcHHH
Confidence 368999999999999999988752 334799999999999999999998 57889999999999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcC-----CEEEEecccccccccccchhhhhcCCCCccE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYD-----LWMHVDACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g-----~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
|+++|+++ ..+|.+|++++++|++|.++|+++|+++|++|| +|+|||+|++++..++......++....+|+
T Consensus 151 L~~~i~~~---~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDS 227 (374)
T PLN03032 151 LERALAKN---RDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGS 227 (374)
T ss_pred HHHHHHHc---CCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcE
Confidence 99999863 235889999999999999999999999999996 5999999999998865332222233346999
Q ss_pred EEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCC-chhHHHHHHHHHhChHHHH
Q psy14299 158 VSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRK-VDAFKLWLMWKARGNLGFR 236 (448)
Q Consensus 158 ~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~g~~ 236 (448)
+++|+||++++|.|+|++++|++. +. .+...++|+... +++++++|+ +.++++|+.++.+|.+|++
T Consensus 228 is~s~HK~~g~P~g~G~ll~r~~~-~~-~~~~~~~Yl~~~-----------d~ti~gSR~g~~~l~~w~~l~~~G~~g~~ 294 (374)
T PLN03032 228 VSVSGHKFLGCPMPCGVALTRKKH-VK-ALSQNVEYLNSR-----------DATIMGSRNGHAPLYLWYTLRRKGYRGIK 294 (374)
T ss_pred EEECcccccCCCcCeEEEEEEchh-hH-hhccCCcccCCC-----------CCcccCCCchHHHHHHHHHHHHhCHHHHH
Confidence 999999999999999999998753 33 334567787542 346788887 5678899888888888888
Q ss_pred HHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccH
Q psy14299 237 HFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 316 (448)
Q Consensus 237 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 316 (448)
+.+++
T Consensus 295 ~~~~~--------------------------------------------------------------------------- 299 (374)
T PLN03032 295 RDVQH--------------------------------------------------------------------------- 299 (374)
T ss_pred HHHHH---------------------------------------------------------------------------
Confidence 75554
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee
Q psy14299 317 RHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ 396 (448)
Q Consensus 317 ~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~ 396 (448)
..++++++.+.|++. +++++ ..|..++|+|+... . +.+. +|+.. ...
T Consensus 300 ------~~~~a~~l~~~l~~~-~~~~~-~~p~~~~V~f~~~~---~--------------------~~~~-~~w~l-~~~ 346 (374)
T PLN03032 300 ------CMRNAHYLKDRLTEA-GLTCR-LNELSSTVVFERPM---D--------------------EAFI-KKWQL-ACE 346 (374)
T ss_pred ------HHHHHHHHHHHHHhC-CCcEE-ECCCceEEEEcCCC---c--------------------HhHh-heeee-ccc
Confidence 555699999999997 88887 77888888885321 0 1122 45332 221
Q ss_pred ecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy14299 397 PLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELR 432 (448)
Q Consensus 397 ~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~ 432 (448)
. ..+|+++| +.++++.+|.|++.|++.
T Consensus 347 ---~----~~~hi~vm--~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 347 ---G----DIAHVVVM--PNVTVEKLDEFVEELVEV 373 (374)
T ss_pred ---C----CEEEEEEC--CCCCHHHHHHHHHHHhcc
Confidence 1 47999996 678899999999998763
No 11
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-38 Score=323.39 Aligned_cols=328 Identities=23% Similarity=0.345 Sum_probs=234.0
Q ss_pred CccEEEeCcHHHHHHHHHHHHHHhcCCcccc-cCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcC
Q psy14299 2 NLKPFLLPGGSISNMYSICLARYRLDPDTKR-KGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMI 79 (448)
Q Consensus 2 ~~~g~~t~ggT~an~~al~~a~~~~~~~~~~-~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id 79 (448)
.+.|+||+|||+||++|+.++|+++.+...+ .+.. .....||+|..+|+|+.|+++++|++ ++.++.++ +.+||
T Consensus 119 ~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~-~~~P~ii~s~~aH~s~~Kaa~~lG~~---~~~v~~~~~~~~id 194 (460)
T COG0076 119 EASGTFTSGGTEANLLALLAARERWRKRALAESGKP-GGKPNIVCSETAHFSFEKAARYLGLG---LRRVPTVPTDYRID 194 (460)
T ss_pred CCceEEEcChHHHHHHHHHHHHHHHHHHhhhccccc-CCCCeEEecCcchhHHHHHHHHhCCC---ceeEEeccCccccC
Confidence 4689999999999999999999987533222 2222 22337999999999999999999995 55566555 89999
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhh-hcCCCCccEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFV-LKGINRANSV 158 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~-~~~~~~aD~~ 158 (448)
+++|+++++++...+ .|+.+.++|.+|.+|||++|+++|+++++|+|||+|+|+..+++...... ..+++.|||+
T Consensus 195 ~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSI 270 (460)
T COG0076 195 VDALEEAIDENTIGG----VVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSI 270 (460)
T ss_pred HHHHHHHHHhhccCc----eEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEE
Confidence 999999999853322 59999999999999999999999999999999999999999977766666 5788899999
Q ss_pred EECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCc-hhHHHHHHHHHhChHHHHH
Q psy14299 159 SWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKV-DAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 159 ~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~g~~~ 237 (448)
++|+|||+++|+|||++++|+++.+........+|+... ....+++.++|.. .+++.|+.++.+|.+|+++
T Consensus 271 t~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~--------~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~ 342 (460)
T COG0076 271 TVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGG--------GIPNFTILGSRPGRQALALYANLRRLGREGYRK 342 (460)
T ss_pred EECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCC--------CcCceeEeeccchHHHHHHHHHHHHhCHhHHHH
Confidence 999999999999999999999865666554455555432 1334455556554 4455555555555555554
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
T Consensus 343 -------------------------------------------------------------------------------- 342 (460)
T COG0076 343 -------------------------------------------------------------------------------- 342 (460)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
+.++..++++++.+.|.+.+.|+++ .+|..++++|++.+ ..+ ...+..+.++..+..+...+..+|..++....
T Consensus 343 -l~~~~~~~a~~la~~l~~~~~~e~~-~~p~l~~V~fr~~~-~~~---~~~~~~~~~~~~gw~v~~~~~~~~~~~v~~~~ 416 (460)
T COG0076 343 -LLDRTLELARYLAEELEKLGDFELV-NEPELPIVAFRLKD-DED---TLADLSERLDRRGWQVPAQLLPKGLAIVFGTH 416 (460)
T ss_pred -HHHHHHHHHHHHHHHHHhCCCcEee-cCCccceEEEEcCC-ccc---chhchHHHHHhcCceeecccCCccceeeeeeE
Confidence 6666777899999999999779999 88999999999833 211 01111122222333344444444433333333
Q ss_pred cCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 398 LQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 398 ~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
..+. ..+++... +..++.++ +.+...+....++.
T Consensus 417 ~~~~---~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~ 450 (460)
T COG0076 417 VTGR---QGLKFIVA-NLLITDRE-ESLLALIEEPGREI 450 (460)
T ss_pred Eeee---eeehhhcc-hhhhhhhh-HHHHHHhhhhhhhh
Confidence 3333 45666665 55555555 55555555544443
No 12
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=2e-36 Score=306.40 Aligned_cols=284 Identities=24% Similarity=0.388 Sum_probs=219.8
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
.+|+||+||||+|++|+.++|+. .++..|++++.+|+|+.++++.+|+ ..+.|+.+++|++|+++
T Consensus 85 ~~G~~TsGgTean~~a~~~ar~~------------~~~~~ii~s~~~H~Sv~ka~~~lg~---~~~~V~~~~~g~id~~~ 149 (380)
T PRK02769 85 SWGYITNGGTEGNLYGCYLAREL------------FPDGTLYYSKDTHYSVSKIARLLRI---KSRVITSLPNGEIDYDD 149 (380)
T ss_pred CCEEEecChHHHHHHHHHHHHHh------------CCCcEEEeCCCceehHHHHHHHcCC---CCceeccCCCCcCcHHH
Confidence 36899999999999999998875 2556899999999999999999998 56678888899999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcC---CEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYD---LWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g---~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
|+++|+++ +.+|.+|++++++|++|.++|+++|+++|++|| +|+|||+||+++.++.......++....+|+++
T Consensus 150 L~~~i~~~---~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis 226 (380)
T PRK02769 150 LISKIKEN---KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIA 226 (380)
T ss_pred HHHHHHhC---CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEE
Confidence 99999874 456899999999999999999999999999998 699999999999886543322333333699999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCc-hhHHHHHHHHHhChHHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKV-DAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~g~~~~ 238 (448)
+|+|||+++|.|+|++++|++. +... .....|+... ++++.++|+. .++.+|++++.+
T Consensus 227 ~s~HK~~~~P~g~G~l~~r~~~-~~~~-~~~~~yl~~~-----------d~t~~GSR~g~~~l~lw~aL~~l-------- 285 (380)
T PRK02769 227 ISGHKFIGSPMPCGIVLAKKKY-VERI-SVDVDYIGSR-----------DQTISGSRNGHTALLLWAAIRSL-------- 285 (380)
T ss_pred ECCcccCCCCCCcEEEEEehhh-hhhc-ccCccccCCC-----------CCCccCCCCcHHHHHHHHHHHHH--------
Confidence 9999999999999999999753 3332 2345555321 2345666653 344555555554
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
+.+|+++
T Consensus 286 -------------------------------------------------------------------------g~~G~~~ 292 (380)
T PRK02769 286 -------------------------------------------------------------------------GSKGLRQ 292 (380)
T ss_pred -------------------------------------------------------------------------CHHHHHH
Confidence 5555555
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeec
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPL 398 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~ 398 (448)
+.++..++++++.++|++. |++++ .+|.+++|+|.... .++ . +|+. +...
T Consensus 293 ~~~~~~~la~~l~~~L~~~-g~~~~-~~p~~~~v~f~~~~--------------------~~~----~-~~w~-l~~~-- 342 (380)
T PRK02769 293 RVQHCLDMAQYAVDRLQAN-GIPAW-RNPNSITVVFPCPS--------------------ERI----W-KKWH-LATS-- 342 (380)
T ss_pred HHHHHHHHHHHHHHHHHhC-CCEEE-cCCCceEEEEcCCC--------------------HHH----H-hCee-Eccc--
Confidence 7777888899999999986 99998 88899999995321 022 1 4533 2221
Q ss_pred CCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 399 QHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 399 ~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
+ .++|+++| +.+|+|.||.+++.|.+..+.
T Consensus 343 -~----~~~hi~~~--~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 343 -G----NQAHIITM--PHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred -C----CEEEEEEC--CCCCHHHHHHHHHHHHHHHhc
Confidence 1 47999996 788999999999999987763
No 13
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.9e-36 Score=302.81 Aligned_cols=305 Identities=17% Similarity=0.165 Sum_probs=229.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHh----CCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWL----GIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~----g~~~~~v~~v~~~~~g~id 79 (448)
..+||+|.|+++........... .+++.|++++.+|+|+.-.++.+ |+ +++.+|.+++|.++
T Consensus 86 eIvft~~tT~aln~va~~l~~~~-----------~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga---~v~~i~~~~~g~~~ 151 (405)
T COG0520 86 EIVFTRGTTEALNLVARGLGRSL-----------KPGDEIVVSDLEHHSNIVPWQELAKRTGA---KVRVIPLDDDGLLD 151 (405)
T ss_pred eEEEeCChhHHHHHHHHHhhhhh-----------cCCCEEEEccCcchhhHHHHHHHHHhcCc---EEEEEecCCCCCcC
Confidence 58999999999655544332111 26688999999999977666543 55 79999999999999
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++.+.+ +|++|++++.+|.+|.+.|+++|+++||++|++++||+||++++.++|.. .+ ++|+++
T Consensus 152 ~~~~~~~i~~------~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~-----~l-~~Df~a 219 (405)
T COG0520 152 LDALEKLITP------KTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQ-----EL-GCDFLA 219 (405)
T ss_pred HHHHHHhcCC------CceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCch-----hc-CCCEEE
Confidence 9999997755 69999999999999999999999999999999999999999999987752 22 589999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
+|+|||+++|.|+|+||+|++. +... .+++...........+. ..
T Consensus 220 fsgHKwl~gP~GiGvLy~r~~~-l~~l----~P~~~gg~~~~~~~~~~-~~----------------------------- 264 (405)
T COG0520 220 FSGHKWLLGPTGIGVLYVRKEL-LEEL----EPFLGGGGMIEYVSRDE-GV----------------------------- 264 (405)
T ss_pred EcccccccCCCceEEEEEchHH-Hhhc----CCcccCCCceeeecccc-cc-----------------------------
Confidence 9999999999999999998863 4332 22222211110000000 00
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcccccc--chhhHHHHHHHHHhcCccHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGR--KVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~G~~ 317 (448)
.+.-...+|+++. +...+++..+++++.++|++
T Consensus 265 ---------------------------------------------~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~ 299 (405)
T COG0520 265 ---------------------------------------------TLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGME 299 (405)
T ss_pred ---------------------------------------------cccCcchhhccCCchHHHHHhHHHHHHHHHHHhHH
Confidence 0001112233333 56688888999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccC--CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEe
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPE--FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGY 395 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~ 395 (448)
++.++...|++++.+.|+++|++++++++ .+.++++|.+...+ ..++...|.++| +.+..
T Consensus 300 ~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~-----------------~~dv~~~L~~~g-I~vr~ 361 (405)
T COG0520 300 AIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIH-----------------PHDVATLLDEKG-IAVRA 361 (405)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCC-----------------HHHHHHHHHhCC-eEEEe
Confidence 99999999999999999999999999433 36899999764321 237889999999 55543
Q ss_pred eecCCc------ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 396 QPLQHR------NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 396 ~~~~g~------~~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
+..... +....+|+|+ ++|||+||||+|+++|+++.+
T Consensus 362 g~~ca~p~~~~~~~~~~iR~S~--~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 362 GHHCAQPLHRLLGVDATIRASL--HLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred ccccccHHHHhcCCCCceEEEE--eecCCHHHHHHHHHHHHHHhh
Confidence 322111 1124599999 899999999999999998764
No 14
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=1.4e-34 Score=290.14 Aligned_cols=287 Identities=36% Similarity=0.547 Sum_probs=223.9
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
..++||+|||+||++++.+++.+..++.+..|....++.+|++++.+|+++.++++..|. +++.+|.++++.+|+++
T Consensus 58 ~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~ 134 (345)
T cd06450 58 ADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDV---KVRLVPVDEDGRMDPEA 134 (345)
T ss_pred CCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhc---CeEEeeeCCCCCcCHHH
Confidence 469999999999999999987754333222222212456899999999999999998888 78999998888999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
|++++.+...++.++++|++++++|++|.++|+++|+++|++||+|+|+|+||+.+..+.+........+..+|++++++
T Consensus 135 l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~ 214 (345)
T cd06450 135 LEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDP 214 (345)
T ss_pred HHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEch
Confidence 99999876666667889999999999999999999999999999999999999998876544333233445689999999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
|||+++|.|+|+++++ .+.+|.+
T Consensus 215 ~K~l~~p~g~g~~~~~-----------------------------------------~~~~~~~---------------- 237 (345)
T cd06450 215 HKYGLVPLGCSAVLVR-----------------------------------------ALKLWAT---------------- 237 (345)
T ss_pred hHhhCCCcchHHHHHH-----------------------------------------HHHHHHH----------------
Confidence 9999999999987765 1122333
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 322 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 322 (448)
+++++.+|++++.++
T Consensus 238 -----------------------------------------------------------------l~~l~~~g~~~~~~~ 252 (345)
T cd06450 238 -----------------------------------------------------------------LRRFGRDGYGEHIDR 252 (345)
T ss_pred -----------------------------------------------------------------HHHHhHHHHHHHHHH
Confidence 333444566677788
Q ss_pred HHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcc
Q psy14299 323 AVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRN 402 (448)
Q Consensus 323 ~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~ 402 (448)
..++++++.+.|+++|+++++ .++..++++|++.+.. ..+....++.++|.++|.+++.+....+.
T Consensus 253 ~~~~~~~l~~~L~~~~~~~~~-~~~~~~iv~f~~~~~~------------~~~~~~~~i~~~L~~~g~~~~~~~~~~~~- 318 (345)
T cd06450 253 IVDLAKYLAELIRADPGFELL-GEPNLSLVCFRLKPSV------------KLDELNYDLSDRLNERGGWHVPATTLGGP- 318 (345)
T ss_pred HHHHHHHHHHHHhcCCCeEEe-cCCceeEEEEEECCcc------------hhhHHHHHHHHHHHhcCCEEEEeeEECCe-
Confidence 888999999999999999988 7778899999764310 00112347889999997676665544333
Q ss_pred cccEEEEEecCCCCCCHHHHHHHHHHHHH
Q psy14299 403 LHNFFRLVTTCHPASSRQDMDYAIDQIEL 431 (448)
Q Consensus 403 ~~~~lRis~~~~~~~t~edid~l~~al~~ 431 (448)
.++|++++ +++||++|+|+++++|++
T Consensus 319 --~~lRis~~-~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 319 --NVLRFVVT-NPLTTRDDADALLEDIER 344 (345)
T ss_pred --EEEEEEec-CCCCCHHHHHHHHHHHHh
Confidence 79999996 455799999999999976
No 15
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=8.1e-31 Score=258.65 Aligned_cols=297 Identities=17% Similarity=0.203 Sum_probs=215.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHh---CCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWL---GIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~---g~~~~~v~~v~~~~~g~id~ 80 (448)
..+||+||||+|.+++..+...+. ++ ..+..|+++..+|+++.+.|+++ |. .|.++|++.+|.+|+
T Consensus 63 eIiFTSG~TEsnNlaI~g~~~a~~---~~-----~~~~HIIts~iEH~aVl~~~~~Le~~g~---~Vtyl~V~~~G~v~~ 131 (386)
T COG1104 63 EIIFTSGATESNNLAIKGAALAYR---NA-----QKGKHIITSAIEHPAVLNTCRYLERQGF---EVTYLPVDSNGLVDL 131 (386)
T ss_pred eEEEecCCcHHHHHHHHhhHHhhh---cc-----cCCCeEEEcccccHHHHHHHHHHHhcCC---eEEEeCCCCCCeEcH
Confidence 579999999999999876433211 00 13457999999999999999988 66 799999999999999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
++|+++|++ ++.+|++.+.+|.+|+++||++|+++||++|+++|||++|+.|..+++... + .+|++++
T Consensus 132 e~L~~al~~------~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~-----~-~vD~ls~ 199 (386)
T COG1104 132 EQLEEALRP------DTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEE-----L-GVDLLSF 199 (386)
T ss_pred HHHHHhcCC------CceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceeccccc-----c-CcceEEe
Confidence 999999986 488999999999999999999999999999999999999999999877532 1 3899999
Q ss_pred CCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
|+||+ ++|.|+|+||+|+...+.. .+....+ +.++|.- +.+..|.-|+..+++
T Consensus 200 SaHK~-~GpkGiGaLyv~~~~~~~p-------~i~GGgQ-------------E~g~RsG------Tenv~~Ivg~~~A~~ 252 (386)
T COG1104 200 SAHKF-GGPKGIGALYVRPGVRLEP-------LIHGGGQ-------------ERGLRSG------TENVPGIVGFGKAAE 252 (386)
T ss_pred ehhhc-cCCCceEEEEECCCCccCc-------eeccCcC-------------CCCCCCC------CccHHHHHHHHHHHH
Confidence 99996 5699999999966543322 2221111 1222210 112233444444333
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
-.. +.++...
T Consensus 253 ~a~----------------------------------------------------------------------~~~~~~~ 262 (386)
T COG1104 253 IAV----------------------------------------------------------------------EELEEEN 262 (386)
T ss_pred HHH----------------------------------------------------------------------HHHHHHH
Confidence 222 2355667
Q ss_pred HHHHHHHHHHHHHhhcC-CCeEEecc-CCce-eeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 321 DNAVDCSRYFLSQISQR-PGFRLVIP-EFQC-TNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~~-pg~~l~~~-~~~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
.+...++++|.+.|.+. |++.+.+. .++. +++.|.+. ++.+ +.+.-.|...| +.++.+.
T Consensus 263 ~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~--gv~g---------------E~ll~~L~~~g-I~vStGS 324 (386)
T COG1104 263 ARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFP--GVEG---------------ESLLLALDLAG-IAVSTGS 324 (386)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeC--CCcH---------------HHHHHhccccC-eEEeccc
Confidence 78889999999999976 88888632 2333 44455543 2321 24556666677 5554321
Q ss_pred cC--------------Cc---ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHHhh
Q psy14299 398 LQ--------------HR---NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDLEM 440 (448)
Q Consensus 398 ~~--------------g~---~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~~~ 440 (448)
-. |. .-.+.+|||+ +.+||++|||+++++++++.++++..+
T Consensus 325 ACsS~~~~pShVL~AmG~~~e~a~~siR~S~--g~~tt~eei~~~~~~l~~~i~~lr~~~ 382 (386)
T COG1104 325 ACSSGSLEPSHVLRAMGISEELAHGSIRFSL--GRFTTEEEIDAAAEALKEIIKRLRELS 382 (386)
T ss_pred cccCCCCCccHHHHHcCCChHHhCccEEEEc--CCCCCHHHHHHHHHHHHHHHHHHhhhc
Confidence 10 11 1237899999 699999999999999999998876544
No 16
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.97 E-value=8.6e-29 Score=254.22 Aligned_cols=305 Identities=15% Similarity=0.108 Sum_probs=216.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH----HHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML----KAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~----~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+||+|+|+++..++........ .+++.|++++.+|++.. ..++..|+ +++.++.++++.+|
T Consensus 87 ~v~~t~g~t~~l~~~~~~~~~~~~----------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~~~~d 153 (406)
T PRK09295 87 ELVFVRGTTEGINLVANSWGNSNV----------RAGDNIIISEMEHHANIVPWQMLCARVGA---ELRVIPLNPDGTLQ 153 (406)
T ss_pred eEEEeCCHHHHHHHHHHHhhhhcC----------CCcCEEEECcchhhHHHHHHHHHHHHcCc---EEEEEecCCCCCCC
Confidence 579999999997776654321110 25678999999998753 44455677 78899998889999
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+++|++++++ ++++|++++++|++|.+.|+++|+++||++|++++||++|+.+..+.+.. .. .+|+++
T Consensus 154 ~~~l~~~i~~------~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~-----~~-~~D~~~ 221 (406)
T PRK09295 154 LETLPALFDE------RTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQ-----AL-DCDFYV 221 (406)
T ss_pred HHHHHHhcCC------CcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCch-----hc-CCCEEE
Confidence 9999999854 57899999999999999999999999999999999999999887755421 11 479999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
+|+|| +++|.|+|+++++++ .+... +++............. ..+.+
T Consensus 222 ~s~~K-~~gp~G~G~l~~~~~-~~~~~----~~~~~g~~~~~~~~~~-~~~~~--------------------------- 267 (406)
T PRK09295 222 FSGHK-LYGPTGIGILYVKEA-LLQEM----PPWEGGGSMIATVSLT-EGTTW--------------------------- 267 (406)
T ss_pred eehhh-ccCCCCcEEEEEchH-hHhhC----CCcccCCceeeeeecC-Ccccc---------------------------
Confidence 99999 556999999999765 33321 2222211100000000 00000
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcccc--ccchhhHHHHHHHHHhcCccHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQC--GRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
.-...+|+. .+...++++..+++++.++|++
T Consensus 268 -----------------------------------------------~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~ 300 (406)
T PRK09295 268 -----------------------------------------------AKAPWRFEAGTPNTGGIIGLGAALDYVSALGLN 300 (406)
T ss_pred -----------------------------------------------CCchhhcCCCCccHHHHHHHHHHHHHHHHhCHH
Confidence 000011221 2256678888899999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
.+.++...+++++.+.|+++|+++++.+..+.++++|.+. +.. ..++.+.|.++| +.+..+.
T Consensus 301 ~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~--~~~---------------~~~~~~~L~~~g-I~v~~g~ 362 (406)
T PRK09295 301 NIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLG--KHH---------------AYDVGSFLDNYG-IAVRTGH 362 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEEC--CcC---------------HHHHHHHHHhCC-eEEeccc
Confidence 9999999999999999999999999832234678888642 111 125677787788 5444322
Q ss_pred cCC------cccccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 398 LQH------RNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 398 ~~g------~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
... ...++++|+|+ |+|||++|||+|+++|+++.+
T Consensus 363 ~c~~~~~~~~~~~~~iRiS~--~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 363 HCAMPLMAYYNVPAMCRASL--AMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred cchHHHHHHHCCCCEEEEEc--cCCCCHHHHHHHHHHHHHHHH
Confidence 110 00125899999 899999999999999998865
No 17
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.97 E-value=9.8e-29 Score=250.25 Aligned_cols=291 Identities=23% Similarity=0.367 Sum_probs=216.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.+++++|||++|..++.+++.... .+++.|++++.+|+++.+.++..|+ +++.+|.++++.+|+++|
T Consensus 78 ~~~~~~ggt~a~~~a~~~~~~~~~----------~~~~~vl~~~~~h~s~~~~~~~~g~---~~~~v~~~~~~~~d~~~l 144 (371)
T PRK13520 78 YGYITSGGTEANIQAVRAARNLAK----------AEKPNIVVPESAHFSFDKAADMLGV---ELRRAPLDDDYRVDVKAV 144 (371)
T ss_pred CeEEecCcHHHHHHHHHHHHhhcc----------CCCceEEecCcchHHHHHHHHHcCc---eEEEecCCCCCcCCHHHH
Confidence 578999999999999888765310 1356789999999999999998888 788999988899999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchh--hhhcCCCCccEEEEC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYS--FVLKGINRANSVSWN 161 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~--~~~~~~~~aD~~~~s 161 (448)
++++++ ++++|++++++|++|.+.|+++|.++|+++|+++|||+||+++..+..... ... ....+|+++++
T Consensus 145 ~~~i~~------~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~-~~~~vd~~~~s 217 (371)
T PRK13520 145 EDLIDD------NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDF-SLPGVDSITID 217 (371)
T ss_pred HHHHhh------CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccc-cCCCCceEEEC
Confidence 999975 366788888999999999999999999999999999999998765332211 111 12358999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+|||+++|.++|+++++++...... ....+|+.... .+...+++.
T Consensus 218 ~~K~~~a~~~~G~~~~~~~~~~~~l-~~~~~~~~~~~----------~~~~~gt~~------------------------ 262 (371)
T PRK13520 218 PHKMGLAPIPAGGILFRDESYLDAL-AVDTPYLTSKK----------QATLTGTRS------------------------ 262 (371)
T ss_pred CccccCccCCceEEEEcCHHHHHhh-cccCccccCCC----------CcceEeecc------------------------
Confidence 9999999999999998776544332 22223332111 000011111
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
...+.+++.+++.++.+|++++.+
T Consensus 263 --------------------------------------------------------~~~~~~~~~al~~l~~~g~~~~~~ 286 (371)
T PRK13520 263 --------------------------------------------------------GAGVAATYAVMKYLGREGYRKVVE 286 (371)
T ss_pred --------------------------------------------------------ChHHHHHHHHHhhhcHhHHHHHHH
Confidence 122445566677777888888999
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCc
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHR 401 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~ 401 (448)
+..++++++.+.|+++ |++++ .++..++++|.+.+ ..++.+.|.++|+ .+... .+
T Consensus 287 ~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~v~~~~~~-------------------~~~v~~~L~~~gi-~v~~~--~~- 341 (371)
T PRK13520 287 RCMENTRWLAEELKER-GFEPV-IEPVLNIVAFDDPN-------------------PDEVREKLRERGW-RVSVT--RC- 341 (371)
T ss_pred HHHHHHHHHHHHHHhC-CCEEe-cCCCceEEEEecCC-------------------HHHHHHHHHHCCc-eeccC--CC-
Confidence 9999999999999998 99855 45566777765321 1378888998884 44432 12
Q ss_pred ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 402 NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 402 ~~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
+.++|+|+ ++++|++||++++++|+++.+
T Consensus 342 --~~~iRis~--~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 342 --PEALRIVC--MPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred --CCEEEEEE--ECCCCHHHHHHHHHHHHHHhh
Confidence 26899999 579999999999999998754
No 18
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=2.2e-28 Score=250.42 Aligned_cols=305 Identities=15% Similarity=0.101 Sum_probs=217.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHH----HHHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSM----LKAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~----~~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+||+|+|+++.+++.+..... + .+++.|++++.+|++. ...++..|. +++.+|.++++.+|
T Consensus 80 ~i~~t~g~t~~l~~~~~~~~~~~--------~--~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~~~~~ 146 (398)
T TIGR03392 80 NIVWTRGTTESINLVAQSYARPR--------L--QPGDEIIVSEAEHHANLIPWLMVAQQTGA---KVVKLPIGADLLPD 146 (398)
T ss_pred eEEEeCChHHHHHHHHHHhhhcc--------C--CCCCEEEECCcchhHHHHHHHHHHHHcCc---EEEEEecCCCCCcC
Confidence 47899999999877776543210 0 2667899999999884 345566777 79999998888899
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++.+ ++++|++++++|++|.+.|+++|+++||++|++++||++|+.+..+.+. ... .+|+++
T Consensus 147 ~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~-----~~~-~~d~~~ 214 (398)
T TIGR03392 147 IRQLPELLTP------RTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDV-----QAL-DIDFYA 214 (398)
T ss_pred HHHHHHHhcc------CceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCCh-----hhc-CCCEEE
Confidence 9999999864 5789999999999999999999999999999999999999887765432 122 479999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
+|+||+ ++|.|+|+++++++ .+... .++....... ...+...+.
T Consensus 215 ~s~~K~-~gp~G~G~l~~~~~-~~~~~----~~~~~~~~~~--~~~~~~~~~---------------------------- 258 (398)
T TIGR03392 215 FSGHKL-YGPTGIGVLYGKTE-LLEAM----PPWQGGGKML--SHVSFDGFI---------------------------- 258 (398)
T ss_pred Eecccc-cCCCceEEEEEcHH-HHhhC----CCeecCCceE--eeccccccc----------------------------
Confidence 999995 56889999998654 33322 1121110000 000000000
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccc--cchhhHHHHHHHHHhcCccHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCG--RKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~G~~ 317 (448)
+......|+.+ +.+.++++..+++++...|++
T Consensus 259 ----------------------------------------------~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~ 292 (398)
T TIGR03392 259 ----------------------------------------------PQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIA 292 (398)
T ss_pred ----------------------------------------------cCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHH
Confidence 00000112222 245677888889988889999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
++.++..++++++.+.|+++||++++ ..+..++++|.+. ++. ..++.+.|.++| +.+..+.
T Consensus 293 ~i~~~~~~l~~~l~~~l~~l~g~~~~-~~~~~~i~~~~~~--~~~---------------~~~l~~~L~~~g-I~v~~g~ 353 (398)
T TIGR03392 293 AAEAWSVSLADLAEERLAQLPGFRSF-RCPGSSLLAFDFA--GVH---------------HSDLAALLAESG-IALRAGQ 353 (398)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEe-CCCCCcEEEEEeC--CcC---------------HHHHHHHHHhCC-EEEecCc
Confidence 99999999999999999999999987 5566677777642 222 136778888888 5554332
Q ss_pred cCC------cccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 398 LQH------RNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 398 ~~g------~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
... ...++++|+|+ |+|||++||++++++|+++.+++
T Consensus 354 ~~~~~~~~~~g~~~~iRvS~--~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 354 HCAQPLMAALGVSGTLRASF--APYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred cchHHHHHHhCCCCEEEEEe--eccCCHHHHHHHHHHHHHHHHHh
Confidence 110 01136899999 78999999999999999987653
No 19
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=2.6e-28 Score=250.17 Aligned_cols=305 Identities=13% Similarity=0.095 Sum_probs=218.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHH----HHHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSM----LKAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~----~~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+||+|+|+++..++........ .+++.|++++.+|++. ...++..|. +++.+|.+.++.+|
T Consensus 83 ~i~~~~~~t~~i~~~~~~~~~~~~----------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~~~~d 149 (401)
T PRK10874 83 NIVWTRGTTESINLVAQSYARPRL----------QPGDEIIVSEAEHHANLVPWLMVAQQTGA---KVVKLPLGADRLPD 149 (401)
T ss_pred EEEEECCHHHHHHHHHHHhhhccC----------CCcCEEEECCcchHHHHHHHHHHHHHhCC---EEEEEecCCCCcCC
Confidence 478999999998777665432100 2667899999999874 345566677 79999998888999
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++.+++ ++++|++++++|+||.+.|+++|+++|+++|++++||++|+.+..+.+. ..+ .+|+++
T Consensus 150 ~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~-----~~~-~~d~~~ 217 (401)
T PRK10874 150 VDLLPELITP------RTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADV-----QAL-DIDFYA 217 (401)
T ss_pred HHHHHHhcCc------CcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCc-----hhc-CCCEEE
Confidence 9999999954 5889999999999999999999999999999999999999987765432 122 479999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
+|+||+ ++|.|+|+++++++ .+... .++......... .++..+.
T Consensus 218 ~s~~K~-~gp~G~G~l~~~~~-~~~~~----~~~~~~~~~~~~--~~~~~~~---------------------------- 261 (401)
T PRK10874 218 FSGHKL-YGPTGIGVLYGKSE-LLEAM----SPWQGGGKMLTE--VSFDGFT---------------------------- 261 (401)
T ss_pred Eecccc-cCCCccEEEEEchH-HHhcC----CCeecCCcceEe--eccCccC----------------------------
Confidence 999995 56999999998764 33322 112111000000 0000000
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccc--cccchhhHHHHHHHHHhcCccHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQ--CGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
.......|+ ..+.+.++++..+++++..+|++
T Consensus 262 ----------------------------------------------~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~ 295 (401)
T PRK10874 262 ----------------------------------------------PQSAPWRFEAGTPNVAGVIGLSAALEWLADIDIN 295 (401)
T ss_pred ----------------------------------------------CCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHH
Confidence 000011121 22356778888889988889999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
.+.++...+++++.+.|+++||++++ .++..++++|.+. ++. ..++.+.|.++|+ .+..+.
T Consensus 296 ~~~~~~~~l~~~l~~~l~~~~g~~~~-~~~~~~i~~~~~~--~~~---------------~~~~~~~L~~~gI-~v~~g~ 356 (401)
T PRK10874 296 QAESWSRSLATLAEDALAKLPGFRSF-RCQDSSLLAFDFA--GVH---------------HSDLVTLLAEYGI-ALRAGQ 356 (401)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEe-CCCCCcEEEEEEC--CcC---------------HHHHHHHHHHCCc-EEeccc
Confidence 99999999999999999999999987 6666777777642 221 1367788888884 444332
Q ss_pred cCC------cccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 398 LQH------RNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 398 ~~g------~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
... .+..+++|+|+ ++|||++|||+++++|+++.+.+
T Consensus 357 ~~~~~~~~~~g~~~~iRiS~--~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 357 HCAQPLLAALGVTGTLRASF--APYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred cchHHHHHHhCCCCEEEEEe--cccCCHHHHHHHHHHHHHHHHHh
Confidence 111 01137899999 78999999999999999987653
No 20
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.97 E-value=3.6e-28 Score=246.37 Aligned_cols=292 Identities=22% Similarity=0.355 Sum_probs=211.6
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
..+++++|||++|.+++.+++.... .+ .+++.|++++.+|+++.+.++..|+ +++.++.++++.+|+++
T Consensus 77 ~~~~~~~g~~~~~~~~~~~~~~~~~-----~~---~~g~~vl~~~~~h~~~~~~~~~~G~---~~~~v~~~~~~~~d~~~ 145 (373)
T TIGR03812 77 AYGYIVSGGTEANIQAVRAAKNLAR-----EE---KRTPNIIVPESAHFSFEKAAEMLGL---ELRYAPLDEDYTVDVKD 145 (373)
T ss_pred CCeEEeccHHHHHHHHHHHHHHHHh-----cc---CCCcEEEECCcchHHHHHHHHHcCC---eEEEEeeCCCCCcCHHH
Confidence 3578999999999888876654210 00 1446789999999999999999998 78999998889999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccch-----hhhhcCCCCccE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKY-----SFVLKGINRANS 157 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~-----~~~~~~~~~aD~ 157 (448)
+++++++ ++..+++++++|++|.+.|+++|.++||++|+++|||+||+++......+ ...+ ....+|+
T Consensus 146 l~~~l~~------~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~-~~~~~d~ 218 (373)
T TIGR03812 146 VEDLIDD------NTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDF-SLPGVQS 218 (373)
T ss_pred HHHHHhh------CcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccc-cCCCCCE
Confidence 9999965 24456666688999999999999999999999999999999776533211 1111 1225799
Q ss_pred EEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 158 VSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 158 ~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
+++++|||+.+|.++|.+++++++.+... ....+|+.... .....+++.
T Consensus 219 ~~~s~~K~~~~~~~~G~~~~~~~~~~~~l-~~~~~~~~~~~----------~~~~~gt~~-------------------- 267 (373)
T TIGR03812 219 ITIDPHKMGLSPIPAGGILFRSKSYLKYL-SVDAPYLTVKK----------QATITGTRS-------------------- 267 (373)
T ss_pred EEECccccCCCcCCceEEEEeCHHHHhhh-cccCcccCCCC----------CcceEeech--------------------
Confidence 99999999999999998887776554432 12223332110 000011111
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
...+.++..++++++++|++
T Consensus 268 ------------------------------------------------------------~~~~~~~~~~l~~l~~~g~~ 287 (373)
T TIGR03812 268 ------------------------------------------------------------GASAAATYAVIKYLGREGYR 287 (373)
T ss_pred ------------------------------------------------------------hHHHHHHHHHHHHhCHHHHH
Confidence 12244556677778888999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
++.++..++++++++.|+++ |++.+ .++..++++|... + ..++.++|.++| +++....
T Consensus 288 ~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~v~~~~~--~-----------------~~~v~~~L~~~g-i~v~~~~ 345 (373)
T TIGR03812 288 KIVAECMENTRYLVEELKKI-GFEPV-IEPVLNIVAFEVD--D-----------------PEEVRKKLRDRG-WYVSVTR 345 (373)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCeEE-cCCCceEEEEEeC--C-----------------HHHHHHHHHHCC-ceeccCC
Confidence 99999999999999999998 66654 4466777777542 1 126888999998 4444321
Q ss_pred cCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy14299 398 LQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELR 432 (448)
Q Consensus 398 ~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~ 432 (448)
+ +.++|+++ +.++|++|+++++++|+++
T Consensus 346 --~---~~~iRis~--~~~~t~edid~l~~~L~~~ 373 (373)
T TIGR03812 346 --C---PKALRIVV--MPHVTREHIEEFLEDLKEI 373 (373)
T ss_pred --C---CCEEEEEE--ECCCCHHHHHHHHHHHhhC
Confidence 2 26899999 5789999999999999863
No 21
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.97 E-value=5.1e-28 Score=245.56 Aligned_cols=295 Identities=12% Similarity=0.104 Sum_probs=213.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH----HHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA----AHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~----~~~~g~~~~~v~~v~~~~~g~id 79 (448)
.++||+|+|+++.+++....+ +++.|+++..+|.++... ++..|. +++.++.++++.+|
T Consensus 64 ~v~~~~g~t~al~~~~~~~~~--------------~gd~vl~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d 126 (376)
T TIGR01977 64 HVVFTNNATTALNIALKGLLK--------------EGDHVITTPMEHNSVARPLECLKEQIGV---EITIVKCDNEGLIS 126 (376)
T ss_pred eEEEeCCHHHHHHHHHHhccC--------------CCCEEEECcchhhHHHHHHHHHHHHcCc---EEEEEecCCCCCcC
Confidence 478999999998877655322 567789999999987643 444476 78899988888999
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++++++|++|.+.|+++|.++||++|++++||+||++|..+.+... ..+|+++
T Consensus 127 ~~~l~~~~~~------~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~------~~~D~~~ 194 (376)
T TIGR01977 127 PERIKRAIKT------NTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDMTE------LAIDMLA 194 (376)
T ss_pred HHHHHHhcCC------CCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCchh------cCCCEEE
Confidence 9999999854 578999999999999999999999999999999999999999987654311 2589999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
+++|||+++|.|+|+++++++..+.........+. . ...+.. . ....++
T Consensus 195 ~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~---~----~~~~~~-~--~~~~r~--------------------- 243 (376)
T TIGR01977 195 FTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSH---S----ALIDQP-S--ELPDRF--------------------- 243 (376)
T ss_pred ecccccccCCCCceEEEEcCCcCcCceecCCCccc---c----cccccc-c--cchhhc---------------------
Confidence 99999999999999999988752222111000000 0 000000 0 000000
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 319 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 319 (448)
.....+.+...++..+++++.++|++.+
T Consensus 244 ----------------------------------------------------~~~t~~~~~~~a~~~al~~~~~~g~~~~ 271 (376)
T TIGR01977 244 ----------------------------------------------------ESGTLNTPGIAGLNAGIKFIEKIGIANI 271 (376)
T ss_pred ----------------------------------------------------cCCCCCHHHHHHHHHHHHHHHHhCHHHH
Confidence 0112234556777788899999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEeccCC----ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEEE
Q psy14299 320 VDNAVDCSRYFLSQISQRPGFRLVIPEF----QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMIG 394 (448)
Q Consensus 320 ~~~~~~l~~~~~~~L~~~pg~~l~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~~ 394 (448)
.++..++++++.+.|.+++|++++ .+. ..++++|... +++ ..++.+.|.++ | +.+.
T Consensus 272 ~~~~~~l~~~~~~~l~~~~~~~~~-~~~~~~~~~~~v~~~~~--~~~---------------~~~~~~~L~~~~g-i~v~ 332 (376)
T TIGR01977 272 AKKECMLTEKLLNGLREINKVKIY-GPADPANRVGVVSFTVE--GID---------------SEEVADILDEKFD-IATR 332 (376)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEe-CCCCccccCCeEEEEEC--CCC---------------HHHHHHHHhccCC-EEEE
Confidence 999999999999999999999998 431 3566777652 222 13688888887 6 5554
Q ss_pred eeecC--------CcccccEEEEEecCCCCCCHHHHHHHHHHHHH
Q psy14299 395 YQPLQ--------HRNLHNFFRLVTTCHPASSRQDMDYAIDQIEL 431 (448)
Q Consensus 395 ~~~~~--------g~~~~~~lRis~~~~~~~t~edid~l~~al~~ 431 (448)
.+... |....+.+|+++ +.++|++||++++++|++
T Consensus 333 ~g~~~~~~~~~~~g~~~~~~iRis~--~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 333 TGLHCAPLAHKTIGTFATGTIRLSL--GYFNTEEEIEKLLEALSE 375 (376)
T ss_pred cccccchHHHHHhCCCCCCeEEEec--CCCCCHHHHHHHHHHHhh
Confidence 33211 111236899999 789999999999999985
No 22
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.97 E-value=8.7e-28 Score=244.43 Aligned_cols=290 Identities=16% Similarity=0.151 Sum_probs=207.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHh---CCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWL---GIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~---g~~~~~v~~v~~~~~g~id~ 80 (448)
.++||+|+|+++..++....... .+++.|+++..+|+++...+... |. +++.+|.+++|.+|+
T Consensus 61 ~i~~t~~~t~a~~~al~~~~~~~-----------~~~~~vv~~~~~~~s~~~~~~~~~~~G~---~v~~v~~~~~g~~~~ 126 (379)
T TIGR03402 61 EIIFTSGGTESDNTAIKSALAAQ-----------PEKRHIITTAVEHPAVLSLCQHLEKQGY---KVTYLPVDEEGRLDL 126 (379)
T ss_pred eEEEeCcHHHHHHHHHHHHHHhc-----------CCCCeEEEcccccHHHHHHHHHHHHcCC---EEEEEccCCCCcCCH
Confidence 47899999999998887654320 13467889999999987766544 55 788999888899999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
+++++.+++ +++++++++++|++|.+.|+++|+++||+||+++|+|++|+.+..+.+.. .. .+|++++
T Consensus 127 ~~l~~~i~~------~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~-----~~-~~D~~~~ 194 (379)
T TIGR03402 127 EELRAAITD------DTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLK-----EM-NIDMLSL 194 (379)
T ss_pred HHHHHhcCC------CcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCcc-----cC-CCCEEEE
Confidence 999999864 47899999999999999999999999999999999999999987765532 12 5899999
Q ss_pred CCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
++|| +++|.|+|+++++++..+ . +++..... ....+.+
T Consensus 195 s~~K-~~gp~G~g~l~v~~~~~~------~-p~~~g~~~---------~~~~~~g------------------------- 232 (379)
T TIGR03402 195 SGHK-LHGPKGVGALYIRKGTRF------R-PLLRGGHQ---------ERGRRAG------------------------- 232 (379)
T ss_pred cHHH-cCCCCceEEEEECCCCCC------C-CcccCCcc---------CCCcCCC-------------------------
Confidence 9999 678999999999765311 1 11110000 0000000
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
..+.+.++++..++++... +++.+.
T Consensus 233 ------------------------------------------------------t~~~~~~~~l~~al~~~~~-~~~~~~ 257 (379)
T TIGR03402 233 ------------------------------------------------------TENVPGIVGLGKAAELATE-HLEEEN 257 (379)
T ss_pred ------------------------------------------------------CccHHHHHHHHHHHHHHHH-hHHHHH
Confidence 0112223344444544433 577888
Q ss_pred HHHHHHHHHHHHHhhc-CCCeEEeccCC--c-eeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee
Q psy14299 321 DNAVDCSRYFLSQISQ-RPGFRLVIPEF--Q-CTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ 396 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~-~pg~~l~~~~~--~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~ 396 (448)
++..++++++++.|++ +|++++. .++ . .+++.|.+.. .. ..++.+.|.++| +.+..+
T Consensus 258 ~~~~~l~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~---------------~~~~~~~l~~~g-I~v~~g 318 (379)
T TIGR03402 258 TRVRALRDRLEAGLLARIPDARLN-GDPTKRLPNTVNISFEY--IE---------------GEAILLLLDMEG-ICASSG 318 (379)
T ss_pred HHHHHHHHHHHHHHHhhCCCEEEe-CCCccCCCCEEEEEecC--CC---------------HHHHHHhhccCC-EEEEch
Confidence 9999999999999996 9999987 433 2 2466666531 21 136778887888 555433
Q ss_pred ecC--------------Cc---ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 397 PLQ--------------HR---NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 397 ~~~--------------g~---~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
... |. ..++.+|+|+ |++||++|||+++++|+++.+++.
T Consensus 319 ~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~--~~~~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 319 SACTSGSLEPSHVLRAMGVPHTAAHGSIRFSL--SRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred hhcCCCCCCcCHHHHHcCCChhhcCceEEEEc--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 210 00 0136899999 899999999999999999887754
No 23
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.97 E-value=1.1e-27 Score=245.70 Aligned_cols=303 Identities=17% Similarity=0.169 Sum_probs=216.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH----HHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML----KAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~----~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
.++||+|+|+++..++.+...... .+++.|++++.+|+|.. ..++..|. +++.++.++++.+|
T Consensus 82 ~v~~~~g~t~~l~~~~~~~~~~~~----------~~g~~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~v~~~~~~~~~ 148 (403)
T TIGR01979 82 EIVFTRGTTESINLVAYSWGDSNL----------KAGDEIVISEMEHHANIVPWQLLAERTGA---TLKFIPLDDDGTLD 148 (403)
T ss_pred eEEEeCCHHHHHHHHHHHhhhhcC----------CCCCEEEECcchhhHHHHHHHHHHHhcCc---EEEEEecCCCCCCC
Confidence 589999999997766654422110 25678999999999854 45556677 78999998889999
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++.+.+ ++++|++++++|++|.+.|+++|+++||+||++++||++|+.+..+.+. ... .+|+++
T Consensus 149 ~~~l~~~i~~------~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~-----~~~-~~d~~~ 216 (403)
T TIGR01979 149 LDDLEKLLTE------KTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDV-----QAL-DCDFYV 216 (403)
T ss_pred HHHHHHHhcc------CCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCc-----ccc-CCCEEE
Confidence 9999999864 5889999999999999999999999999999999999999988765432 112 479999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
+++||++ +|.|+|+++++++ ..... .++............+.. .
T Consensus 217 ~s~~K~~-gp~G~g~l~~~~~-~~~~~----~~~~~g~~~~~~~~~~~~--------~---------------------- 260 (403)
T TIGR01979 217 FSGHKMY-GPTGIGVLYGKEE-LLEQM----PPFLGGGEMIAEVSFEET--------T---------------------- 260 (403)
T ss_pred Eeccccc-CCCCceEEEEchH-HHhcC----CCeecCCCceeecccCcc--------c----------------------
Confidence 9999976 5999999998764 33222 112211100000000000 0
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcccccc--chhhHHHHHHHHHhcCccHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGR--KVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~G~~ 317 (448)
+......|+++. ...++++..+++++.+.|++
T Consensus 261 ----------------------------------------------~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~ 294 (403)
T TIGR01979 261 ----------------------------------------------YNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLE 294 (403)
T ss_pred ----------------------------------------------cCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHH
Confidence 000011122211 44567778888888888999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCC----ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEE
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEF----QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMI 393 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~ 393 (448)
++.++..++++++.+.|+++||++++ .++ +.++++|.+.. .. ..++.+.|.++| +.+
T Consensus 295 ~~~~~~~~l~~~l~~~l~~~~g~~~~-~~~~~~~~~~~v~~~~~~--~~---------------~~~~~~~L~~~g-I~v 355 (403)
T TIGR01979 295 NIEAHEHELTAYALERLGEIPGLRIY-GPRDAEDRGGIISFNVEG--VH---------------PHDVGTILDEEG-IAV 355 (403)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEe-CCCCccccCceEEEEeCC--cC---------------HHHHHHHHhhCC-EEE
Confidence 99999999999999999999999998 432 36777876521 21 126778888888 444
Q ss_pred Eeee--------cCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 394 GYQP--------LQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 394 ~~~~--------~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
..+. ..+ .++++|+|+ |++||++|+++|+++|+++.+.+
T Consensus 356 ~~g~~~~~~~~~~~~--~~~~iRiS~--~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 356 RSGHHCAQPLMRRFG--VPATCRASF--YIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred cchhhhhHHHHHHhC--CCCEEEEEe--ccCCCHHHHHHHHHHHHHHHHHh
Confidence 4321 111 136899999 79999999999999999987765
No 24
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=2.2e-27 Score=245.13 Aligned_cols=305 Identities=16% Similarity=0.123 Sum_probs=215.4
Q ss_pred cEEEeCcHHHHHHHHHHHHH-HhcCCcccccCCCCCCCeEEEecCCCchHHHH----HHHHhCCCCCcEEEEecCCCCCc
Q psy14299 4 KPFLLPGGSISNMYSICLAR-YRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLK----AAHWLGIGMDNVIRVKTNERGQM 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~-~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~----~~~~~g~~~~~v~~v~~~~~g~i 78 (448)
.++||+|+|+++..++.... ... .+++.|+++..+|++... .++..|. +++.++.++++.+
T Consensus 96 ~v~~t~g~t~al~~i~~~~~~~~~-----------~~gd~vl~~~~~~~s~~~~~~~~a~~~g~---~v~~v~~~~~~~~ 161 (424)
T PLN02855 96 EIVFTRNATEAINLVAYTWGLANL-----------KPGDEVILSVAEHHSNIVPWQLVAQKTGA---VLKFVGLTPDEVL 161 (424)
T ss_pred EEEEeCCHHHHHHHHHHHhhhhcC-----------CCcCEEEECCCccHHHHHHHHHHHHHcCC---EEEEEecCCCCCc
Confidence 58999999999766654321 111 256789999999987543 3455576 7889998888889
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
|++++++.+++ ++++|++++++|++|.+.|+++|+++||++|++++||++|+.+..+++. ... .+|++
T Consensus 162 ~~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~-----~~~-~~d~~ 229 (424)
T PLN02855 162 DVEQLKELLSE------KTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDV-----QTL-GADFL 229 (424)
T ss_pred CHHHHHHHhcc------CceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCc-----hhc-CCCEE
Confidence 99999999964 5889999999999999999999999999999999999999887765442 122 37999
Q ss_pred EECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 159 SWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 159 ~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
++++|| +++|.|+|+++++++ .+... .+++...........+...+ ....
T Consensus 230 ~~s~~K-~~gp~G~G~l~~~~~-~~~~~----~p~~~g~~~~~~~~~~~~~~-~~~~----------------------- 279 (424)
T PLN02855 230 VASSHK-MCGPTGIGFLWGKSD-LLESM----PPFLGGGEMISDVFLDHSTY-APPP----------------------- 279 (424)
T ss_pred Eeeccc-ccCCCccEEEEEchh-hhhcC----CCEecCCCceeeeecCcccc-CCCh-----------------------
Confidence 999999 567999999999765 33322 12221111000000000000 0000
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcccc--ccchhhHHHHHHHHHhcCccH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQC--GRKVDAFKLWLMWKARGNLGF 316 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~G~ 316 (448)
..|+. .+...++++..+++++.++|+
T Consensus 280 ----------------------------------------------------~r~e~GT~~~~~~~~l~~al~~~~~~g~ 307 (424)
T PLN02855 280 ----------------------------------------------------SRFEAGTPAIGEAIGLGAAIDYLSEIGM 307 (424)
T ss_pred ----------------------------------------------------hhccCCChHHHHHHHHHHHHHHHHHhCH
Confidence 01112 124557778888898888999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEeccC-----CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-Cc
Q psy14299 317 RHFVDNAVDCSRYFLSQISQRPGFRLVIPE-----FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GT 390 (448)
Q Consensus 317 ~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~-----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~ 390 (448)
+++.++..++++++++.|+++||++++.+. .+.++++|.+. +.. ..++.+.|.++ |
T Consensus 308 ~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~--~~~---------------~~~v~~~L~~~~g- 369 (424)
T PLN02855 308 DRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVE--GIH---------------PTDLSTFLDQQHG- 369 (424)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEEC--CcC---------------HHHHHHHhcccCC-
Confidence 999999999999999999999999998321 23467777642 221 13678888877 7
Q ss_pred EEEEeeecC------CcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 391 LMIGYQPLQ------HRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 391 ~~~~~~~~~------g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
+.+..+... ....++++|+|+ |+|||++||++|+++|+++.+.+
T Consensus 370 I~v~~g~~c~~~~~~~~g~~~~iRiS~--~~ynt~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 370 VAIRSGHHCAQPLHRYLGVNASARASL--YFYNTKEEVDAFIHALKDTIAFF 419 (424)
T ss_pred EEEechhhhhHHHHHHhCCCCeEEEEe--ccCCCHHHHHHHHHHHHHHHHHH
Confidence 555432210 011136899999 89999999999999999998774
No 25
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.96 E-value=6.4e-28 Score=244.76 Aligned_cols=295 Identities=15% Similarity=0.177 Sum_probs=213.2
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCc
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQM 78 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~i 78 (448)
...+|++|+|+++..++....... .+++.|++...+|++...++ +..|+ +++.++.+.++.+
T Consensus 62 ~~v~~~~~~t~a~~~~~~~l~~~~-----------~~g~~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~i~~~~~~~~ 127 (371)
T PF00266_consen 62 EEVVFTSNGTEALNAVASSLLNPL-----------KPGDEVLVTSNEHPSNRYPWEEIAKRKGA---EVRVIPADPGGSL 127 (371)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHG-----------TTTCEEEEEESSHHHHHHHHHHHHHHTTE---EEEEEEEGTTSSC
T ss_pred cccccccccchhhhhhhhcccccc-----------ccccccccccccccccccccccccccchh---hhccccccccchh
Confidence 357899999999888777764422 25678999999999987444 34566 7999999889999
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
|+++++++|.+ ++++|++++.+|.+|.+.|+++|+++||++|++++||++|+++..+++.. .+ .+|++
T Consensus 128 ~~~~~~~~l~~------~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~-----~~-~~D~~ 195 (371)
T PF00266_consen 128 DLEDLEEALNP------DTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLD-----EL-GADFL 195 (371)
T ss_dssp SHHHHHHHHHT------TESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TT-----TT-TESEE
T ss_pred hhhhhhhhhcc------ccceEEeecccccccEEeeeceehhhhhccCCceeEechhcccccccccc-----cc-cccee
Confidence 99999999964 58899999999999999999999999999999999999999999876632 22 58999
Q ss_pred EECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 159 SWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 159 ~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
++++|| +++|.|+|+++++++. .....+...++..... . .....+ +
T Consensus 196 ~~s~~K-l~gp~G~g~l~v~~~~-~~~~~p~~~~~~~~~~----------------------~----~~~~~~---~--- 241 (371)
T PF00266_consen 196 VFSSHK-LGGPPGLGFLYVRPEA-IERLRPAKPGGGYLDF----------------------P----SLQEYG---L--- 241 (371)
T ss_dssp EEESTS-TTSSSTEEEEEEEHHH-HHHHHTSSSSSSTTTH----------------------H----HHHHHC---H---
T ss_pred eecccc-cCCCCchhhheehhhh-hhcccccccccccccc----------------------c----cchhcc---c---
Confidence 999999 9999999999998863 3333221111110000 0 000000 0
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcccc--ccchhhHHHHHHHHHhcCccH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQC--GRKVDAFKLWLMWKARGNLGF 316 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~G~ 316 (448)
......+.. .+.+.++++..+++.+.+.|+
T Consensus 242 ------------------------------------------------~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~ 273 (371)
T PF00266_consen 242 ------------------------------------------------ADDARRFEGGTPNVPAIYALNEALKLLEEIGI 273 (371)
T ss_dssp ------------------------------------------------HSTTTGSSSSS--HHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------------ccccccccccceeeehhhhHHHHHhhhhcccc
Confidence 001112222 225567778888998899999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEecc---CCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEE
Q psy14299 317 RHFVDNAVDCSRYFLSQISQRPGFRLVIP---EFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMI 393 (448)
Q Consensus 317 ~~~~~~~~~l~~~~~~~L~~~pg~~l~~~---~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~ 393 (448)
+++.++...+++++.+.|.++|+++++.+ ....++++|.+. +.+ ...+.+.|.++| +.+
T Consensus 274 ~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~---------------~~~~~~~L~~~~-I~~ 335 (371)
T PF00266_consen 274 ERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLP--GSD---------------ADDVVKYLEERG-IAV 335 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEET--TSS---------------HHHHHHHHHHHT-EEE
T ss_pred ccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeec--CCC---------------HHHHHHHHhhcC-EEE
Confidence 99999999999999999999999998731 224678888763 222 137888898887 555
Q ss_pred EeeecCC------cccccEEEEEecCCCCCCHHHHHHH
Q psy14299 394 GYQPLQH------RNLHNFFRLVTTCHPASSRQDMDYA 425 (448)
Q Consensus 394 ~~~~~~g------~~~~~~lRis~~~~~~~t~edid~l 425 (448)
..+.... .+.++.+|+|+ |+|||++|||+|
T Consensus 336 ~~G~~~~~~~~~~~~~~~~iRvS~--~~~nt~~dv~~l 371 (371)
T PF00266_consen 336 STGSACAGPSLDILGMGGVIRVSL--HYYNTEEDVDRL 371 (371)
T ss_dssp EESTTTCHHHHHHHHTTTEEEEE---GTTSSHHHHHHH
T ss_pred eccCcccHHHHHHhCCCCEEEEec--cCCCCHHHHhhC
Confidence 5432222 00127999999 899999999986
No 26
>PLN02651 cysteine desulfurase
Probab=99.96 E-value=1.6e-27 Score=241.39 Aligned_cols=281 Identities=14% Similarity=0.128 Sum_probs=198.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.++||+|+|+++.+++..+..... .+++.|+++..+|+++...+..+.....+++.++.++++.+|++++
T Consensus 62 ~v~~t~~~t~a~~~~l~~~~~~~~----------~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l 131 (364)
T PLN02651 62 EIIFTSGATESNNLAIKGVMHFYK----------DKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDEL 131 (364)
T ss_pred eEEEeCCHHHHHHHHHHHHHHhcc----------CCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHH
Confidence 579999999999988876644211 2566799999999998777654322122788999888899999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++++++ ++++|++++++|++|.+.|+++|+++||++|+++|||++|+++..+++. ..+ ++|++++++|
T Consensus 132 ~~~i~~------~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~-----~~~-~~D~~~~s~h 199 (364)
T PLN02651 132 AAAIRP------DTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDV-----DDL-GVDLMSISGH 199 (364)
T ss_pred HHhcCC------CcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCc-----ccC-CCCEEEechh
Confidence 999964 4789999999999999999999999999999999999999999886653 222 4799999999
Q ss_pred cccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhh
Q psy14299 164 KMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAV 243 (448)
Q Consensus 164 K~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~ 243 (448)
|| ++|.|+|+++++++.. ... .+.+.. ... ...++. |
T Consensus 200 K~-~gp~G~g~l~v~~~~~-~~l---~p~~~g-~~~---------~~~~~~----------------G------------ 236 (364)
T PLN02651 200 KI-YGPKGVGALYVRRRPR-VRL---EPLMSG-GGQ---------ERGRRS----------------G------------ 236 (364)
T ss_pred hh-CCCCceEEEEEcCCCC-CCC---CccccC-CCc---------cCCccC----------------C------------
Confidence 98 7899999999987642 211 111111 000 000000 0
Q ss_pred hhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHHH
Q psy14299 244 DCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 323 (448)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 323 (448)
-.+...++++..+++++..+ .+++.++.
T Consensus 237 ---------------------------------------------------T~~~~~~~~l~~al~~~~~~-~~~i~~~~ 264 (364)
T PLN02651 237 ---------------------------------------------------TENTPLVVGLGAACELAMKE-MDYDEKHM 264 (364)
T ss_pred ---------------------------------------------------CccHHHHHHHHHHHHHHHHh-HHHHHHHH
Confidence 01133455566667766654 48899999
Q ss_pred HHHHHHHHHHhhc-CCCeEEecc-CCc---eeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeec
Q psy14299 324 VDCSRYFLSQISQ-RPGFRLVIP-EFQ---CTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPL 398 (448)
Q Consensus 324 ~~l~~~~~~~L~~-~pg~~l~~~-~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~ 398 (448)
.++++++.+.|++ +||++++++ ++. .++++|.+. +++ ..++.+.|.+ +.+..+..
T Consensus 265 ~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~--~~~---------------~~~~~~~L~~---i~v~~g~~ 324 (364)
T PLN02651 265 KALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFA--YVE---------------GESLLMGLKE---VAVSSGSA 324 (364)
T ss_pred HHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeC--CCC---------------HHHHHHHhCC---EEEEchhh
Confidence 9999999999986 789999832 122 357777652 332 1256667743 44432211
Q ss_pred ------------C--Ccc---cccEEEEEecCCCCCCHHHHH
Q psy14299 399 ------------Q--HRN---LHNFFRLVTTCHPASSRQDMD 423 (448)
Q Consensus 399 ------------~--g~~---~~~~lRis~~~~~~~t~edid 423 (448)
. |.. ..+.+|+|+ ++|||++|||
T Consensus 325 c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~--~~~~t~~did 364 (364)
T PLN02651 325 CTSASLEPSYVLRALGVPEEMAHGSLRLGV--GRFTTEEEVD 364 (364)
T ss_pred cCCCCCCcCHHHHHcCCChHHhCceEEEEc--CCCCCHHHcC
Confidence 0 110 137999999 8999999986
No 27
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.96 E-value=1.1e-26 Score=238.58 Aligned_cols=300 Identities=10% Similarity=0.052 Sum_probs=209.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH----HHHhCCCCCcE----EEEecCCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA----AHWLGIGMDNV----IRVKTNER 75 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~----~~~~g~~~~~v----~~v~~~~~ 75 (448)
..+||+|+|+++..++.....+ | .++..|+++..+|.|+... ++..|+ ++ +.++.+++
T Consensus 88 ~v~~~~~~t~~l~~~~~~~~~~--------~---~~~~~i~~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~~~~~ 153 (406)
T TIGR01814 88 EVVVMNTLTINLHLLLASFYKP--------T---PKRYKILLEAKAFPSDHYAIESQLQLHGL---TVEESMVQIEPREE 153 (406)
T ss_pred cEEEeCCchHHHHHHHHHhcCC--------c---CCccEEEecCCCCChHHHHHHHHHHhcCC---CcccceEEeccCCC
Confidence 4799999999977766553221 0 1234688899999996554 345566 44 56776667
Q ss_pred CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCc
Q psy14299 76 GQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRA 155 (448)
Q Consensus 76 g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~a 155 (448)
+.+|++++++.+++. +.++++|+++++++.+|.+.|+++|+++||++|++++||++|++|..+++.. .. ++
T Consensus 154 g~~~~~~l~~~~~~~---~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~-----~~-gv 224 (406)
T TIGR01814 154 ETLRLEDILDTIEKN---GDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLH-----DW-GV 224 (406)
T ss_pred CccCHHHHHHHHHhc---CCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccc-----cC-CC
Confidence 889999999998642 2468899999999999999999999999999999999999999999876532 22 58
Q ss_pred cEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHH
Q psy14299 156 NSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 235 (448)
Q Consensus 156 D~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ 235 (448)
|++++++||||++|+| |+++++++... ...+...+|..... ...++.. ...
T Consensus 225 D~~~~s~hK~l~g~pG-~~l~v~~~~~~-~~~p~~~g~~~~~~---~~~~~~~-~~~----------------------- 275 (406)
T TIGR01814 225 DFACWCTYKYLNAGPG-AGAFVHEKHAH-TERPRLAGWWGHAR---PTRFKMD-NTL----------------------- 275 (406)
T ss_pred CEEEEcCccccCCCCC-eEEEEehhhhh-hcCCCCCcccCCCC---ccccccc-ccc-----------------------
Confidence 9999999999987778 76777665321 11111122211100 0000000 000
Q ss_pred HHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcccc--ccchhhHHHHHHHHHhcC
Q psy14299 236 RHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQC--GRKVDAFKLWLMWKARGN 313 (448)
Q Consensus 236 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 313 (448)
......++. .+.+.+.++..+++++.+
T Consensus 276 ---------------------------------------------------~~~~~~~~~GT~~~~~~~~l~~al~~~~~ 304 (406)
T TIGR01814 276 ---------------------------------------------------GLIPCGFRISNPPILSVAALRGSLDIFDQ 304 (406)
T ss_pred ---------------------------------------------------CCCccceeeCCccHHHHHHHHHHHHHHHh
Confidence 000001111 225667778889999989
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhcC----CCeEEeccCC----ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHH
Q psy14299 314 LGFRHFVDNAVDCSRYFLSQISQR----PGFRLVIPEF----QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKL 385 (448)
Q Consensus 314 ~G~~~~~~~~~~l~~~~~~~L~~~----pg~~l~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L 385 (448)
+|++++.++...+++++++.|+++ |+++++ .+. +.++++|.+. .. ...+.+.|
T Consensus 305 ~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~-~~~~~~~r~~~v~~~~~---~~---------------~~~~~~~L 365 (406)
T TIGR01814 305 AGMEALRKKSLLLTDYLEELIKARCGGPPVLTII-TPRDHAQRGCQLSLTHP---VP---------------GKAVFQAL 365 (406)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEe-CCCChhhcCCeEEEEec---CC---------------HHHHHHHH
Confidence 999999999999999999999885 469988 432 3467777542 11 13678888
Q ss_pred HhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHH
Q psy14299 386 VLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRG 433 (448)
Q Consensus 386 ~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~ 433 (448)
.++| +++.. .+. +.+|+|++ |+|||++|||+++++|+++.
T Consensus 366 ~~~g-i~v~~---~~~---~~iRiS~~-~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 366 IKRG-VIGDK---REP---SVIRVAPV-PLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred HHCC-EEEec---cCC---CeEEEech-hccCCHHHHHHHHHHHHHHh
Confidence 8888 44432 222 68999996 68999999999999998753
No 28
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.96 E-value=7.8e-27 Score=237.76 Aligned_cols=293 Identities=15% Similarity=0.166 Sum_probs=205.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHH---hCCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHW---LGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~---~g~~~~~v~~v~~~~~g~id~ 80 (448)
..+||+|+|+++.+++........ .+ .+++.|+++..+|+++...+.. .|. +++.+|.++++.+|+
T Consensus 62 ~i~~t~g~teal~~~~~~~~~~~~---~~-----~~~~~vi~~~~e~ps~~~~~~~~~~~G~---~v~~v~~~~~g~~d~ 130 (382)
T TIGR03403 62 DIIITSCATESNNWVLKGVYFDEI---LK-----GGKNHIITTEVEHPAVRATCAFLESLGV---EVTYLPINEQGTITA 130 (382)
T ss_pred eEEEeCCHHHHHHHHHHHHHHhhc---cc-----CCCCEEEEcCCccHHHHHHHHHHHHCCC---EEEEEecCCCCCCCH
Confidence 578999999998888765532100 00 1345688899999998877653 455 799999988899999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
++|++++++ +++++++++++|++|.+.|+++|.++|+++|+++|+|++++.+..+.+.. . ..+|++++
T Consensus 131 ~~l~~~i~~------~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~-----~-~~~D~~~~ 198 (382)
T TIGR03403 131 EQVREAITE------KTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQ-----K-AGVDFLSF 198 (382)
T ss_pred HHHHHhccc------CCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCcc-----c-cCCCEEEE
Confidence 999999864 47899999999999999999999999999999999999999887655422 1 14899999
Q ss_pred CCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
++||| ++|.|+|++++|+...+ .+ .+..... . ...+ .|
T Consensus 199 s~~K~-~gp~G~g~l~vr~~~~~------~p-~~~g~~~------------~-~~~~------------~g--------- 236 (382)
T TIGR03403 199 SAHKF-HGPKGVGGLYIRKGVEL------TP-LFHGGEH------------M-GGRR------------SG--------- 236 (382)
T ss_pred cchhh-CCCCceEEEEECCCCCC------CC-cccCCCC------------C-CCcc------------cC---------
Confidence 99998 56999999999875311 11 1110000 0 0000 00
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
..+.+.++++..+++.... +++.+.
T Consensus 237 ------------------------------------------------------t~~~~~~~al~~al~~~~~-~~~~~~ 261 (382)
T TIGR03403 237 ------------------------------------------------------TLNVPYIVAMGEAMRLANE-YLDFEK 261 (382)
T ss_pred ------------------------------------------------------CcChHHHHHHHHHHHHHHH-hHHHHH
Confidence 0112223344445554433 477788
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEeccCC--c-eeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 321 DNAVDCSRYFLSQISQRPGFRLVIPEF--Q-CTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~~pg~~l~~~~~--~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
++...+++++.+.|+++|+++++ .+. + .+++.|.+. ++. ...+...|.++| +.+..+.
T Consensus 262 ~~~~~l~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~---------------~~~~~~~L~~~g-I~v~~g~ 322 (382)
T TIGR03403 262 SHVRRLRDRLEDALLELPDVFVV-GDREHRVPNTILISIK--GVE---------------GEAMLWDLNKAG-IAASTGS 322 (382)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEE-CCCCCCcCCEEEEEeC--CCC---------------HHHHHHhhccCC-EEEEchh
Confidence 99999999999999999999998 432 2 235566542 222 125667788888 5554221
Q ss_pred c--------------CCcc---cccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 398 L--------------QHRN---LHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 398 ~--------------~g~~---~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
. -|.. .++.+|+|+ |++||++|||+++++|+++.+++.
T Consensus 323 ~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~--~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 323 ACASEDLEANPVMVAIGADKELAHTAIRLSL--SRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred ccCCCCCCcCHHHHHcCCChHHhCeeEEEEC--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 0100 126899999 789999999999999999987755
No 29
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.96 E-value=2.2e-26 Score=233.39 Aligned_cols=297 Identities=17% Similarity=0.187 Sum_probs=209.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH----HHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML----KAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~----~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
.+++|+|+|+++.+++.+..... .+++.|+++..+|++.. ..++..|. +++.++.++++.+|
T Consensus 63 ~v~~~~g~t~a~~~~~~~l~~~~-----------~~g~~vl~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d 128 (373)
T cd06453 63 EIIFTRNTTEAINLVAYGLGRAN-----------KPGDEIVTSVMEHHSNIVPWQQLAERTGA---KLKVVPVDDDGQLD 128 (373)
T ss_pred eEEEeCCHHHHHHHHHHHhhhcC-----------CCCCEEEECcchhHHHHHHHHHHHhhcCc---EEEEeecCCCCCcC
Confidence 57899999999888776655410 14567899999999854 34456677 79999998889999
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++.+.+ ++++|++++++|++|.+.|+++|.++|++||+++|+|++++.+..+.+.. .. .+|+++
T Consensus 129 ~~~l~~~l~~------~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~-----~~-~~d~~~ 196 (373)
T cd06453 129 LEALEKLLTE------RTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQ-----DL-GCDFLA 196 (373)
T ss_pred HHHHHHHhcC------CceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeecc-----cc-CCCEEE
Confidence 9999999964 47899999999999999999999999999999999999998877644321 11 479999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
+++|||+++ .|+|+++++++ +.....+ +............+...+.
T Consensus 197 ~s~~K~~~~-~g~g~~~~~~~-~~~~~~~----~~~g~~~~~~~~~~~~~~~---------------------------- 242 (373)
T cd06453 197 FSGHKMLGP-TGIGVLYGKEE-LLEEMPP----YGGGGEMIEEVSFEETTYA---------------------------- 242 (373)
T ss_pred eccccccCC-CCcEEEEEchH-HhhcCCC----eecCCCccccccccccccC----------------------------
Confidence 999999987 78999888654 3333221 1111000000000000000
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcccc--ccchhhHHHHHHHHHhcCccHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQC--GRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
.....+.. .+...+++++.+++++..+|++
T Consensus 243 ------------------------------------------------~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~ 274 (373)
T cd06453 243 ------------------------------------------------DLPHKFEAGTPNIAGAIGLGAAIDYLEKIGME 274 (373)
T ss_pred ------------------------------------------------CCccccCCCCCCHHHHHHHHHHHHHHHHcCHH
Confidence 00001111 2244577778888999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCC--ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEe
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEF--QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGY 395 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~ 395 (448)
++.++..++++++.+.|+++|+++++ .++ ..++++|.+. +++ ..++.+.|.++| +++.+
T Consensus 275 ~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~--~~~---------------~~~i~~~l~~~g-i~i~~ 335 (373)
T cd06453 275 AIAAHEHELTAYALERLSEIPGVRVY-GDAEDRAGVVSFNLE--GIH---------------PHDVATILDQYG-IAVRA 335 (373)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEe-CCccccCCeEEEEEC--CcC---------------HHHHHHHHHHCC-EEecc
Confidence 99999999999999999999999987 432 3556666542 221 237888998888 44443
Q ss_pred eecC------CcccccEEEEEecCCCCCCHHHHHHHHHHH
Q psy14299 396 QPLQ------HRNLHNFFRLVTTCHPASSRQDMDYAIDQI 429 (448)
Q Consensus 396 ~~~~------g~~~~~~lRis~~~~~~~t~edid~l~~al 429 (448)
+... ....++++|+|+ ++++|++|+|+|+++|
T Consensus 336 g~~~~~~~~~~~~~~~~iRis~--~~~~t~~di~~~~~~l 373 (373)
T cd06453 336 GHHCAQPLMRRLGVPGTVRASF--GLYNTEEEIDALVEAL 373 (373)
T ss_pred CccchhHHHHHhCCCCeEEEEe--cCCCCHHHHHHHHhhC
Confidence 2211 111236899999 7999999999999875
No 30
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.95 E-value=4.7e-26 Score=233.64 Aligned_cols=292 Identities=15% Similarity=0.191 Sum_probs=200.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHh---CCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWL---GIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~---g~~~~~v~~v~~~~~g~id~ 80 (448)
.++||+|+|+++.+++........ .+++.|+++..+|+++...+..+ |+ +++.++.++++.+|+
T Consensus 66 ~v~~~~g~t~a~~~~l~~l~~~~~----------~~g~~Vi~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~~~~~d~ 132 (402)
T TIGR02006 66 EIVFTSGATESNNLAIKGIAHFYK----------SKGNHIITSKTEHKAVLDTCRYLEREGF---EVTYLPPKSNGLIDL 132 (402)
T ss_pred eEEEeCCHHHHHHHHHHHHHHhhc----------CCCCEEEECCCccHHHHHHHHHHHhcCC---EEEEEccCCCCcCCH
Confidence 489999999998888766543110 25677999999999988877544 55 789999988899999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
+++++++++ ++++|++++++|++|.+.|+++|.++||++|+++|||++|+.+..+.+.. .. .+|++++
T Consensus 133 ~~l~~~l~~------~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~-----~~-~~D~~~~ 200 (402)
T TIGR02006 133 EELKAAIRD------DTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVN-----EL-KVDLMSI 200 (402)
T ss_pred HHHHHhcCC------CCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCcc-----cc-CCCEEEE
Confidence 999999854 47899999999999999999999999999999999999999988765432 22 5899999
Q ss_pred CCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
++||++ +|.|+|+++++++.... .. +....... ...++.+.
T Consensus 201 s~~K~~-gp~G~G~l~~~~~~~~~-~~----~~~~g~~~---------~~~~~~gt------------------------ 241 (402)
T TIGR02006 201 SGHKIY-GPKGIGALYVRRKPRVR-LE----ALIHGGGH---------ERGMRSGT------------------------ 241 (402)
T ss_pred ehhhhc-CCCceEEEEEccCCCCC-CC----ceecCCCc---------cCCccCCC------------------------
Confidence 999965 59999999998764321 10 11110000 00000000
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
.+...++++..+++++. ++++.+.
T Consensus 242 -------------------------------------------------------~~~~~~~al~~al~~~~-~~~~~~~ 265 (402)
T TIGR02006 242 -------------------------------------------------------LPTHQIVGMGEAFRIAK-EEMAQDT 265 (402)
T ss_pred -------------------------------------------------------ccHHHHHHHHHHHHHHH-HhHHHHH
Confidence 01222344445555544 3688889
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEeccC-Cce-e--eEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHH----hCCcEE
Q psy14299 321 DNAVDCSRYFLSQISQRPGFRLVIPE-FQC-T--NICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV----LGGTLM 392 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~~pg~~l~~~~-~~~-~--~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~----~~g~~~ 392 (448)
++...+++++.+.|+++|++++++.. .+. + +++|.. ... ..+...|. +.| .+
T Consensus 266 ~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~----~~~---------------~~~~~~l~~i~v~~G-~~ 325 (402)
T TIGR02006 266 AHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNY----VEG---------------ESLIMALKDLAVSSG-SA 325 (402)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeC----cCH---------------HHHHHhcCCEEEech-hh
Confidence 99999999999999999999887311 122 2 344431 110 12333331 112 11
Q ss_pred EEeeec--------CCc---ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 393 IGYQPL--------QHR---NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 393 ~~~~~~--------~g~---~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
+.+... .|. ...+++|+|+ +++||++|||+++++|+++.+.+.
T Consensus 326 c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~--~~~~t~edid~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 326 CTSASLEPSYVLRALGINDELAHSSIRFTI--GRFTTEEEIDYAVKLVKSAIDKLR 379 (402)
T ss_pred cCCCCCCccHHHHHcCCChhhcCceEEEEe--cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 211100 000 0137899999 899999999999999999987764
No 31
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.95 E-value=1.2e-25 Score=226.63 Aligned_cols=294 Identities=14% Similarity=0.098 Sum_probs=209.3
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH--HHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS--MLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s--~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
+++|+|||+++..++.+... +++.|+++...|++ +...++..|. +++.+|.++++.+|+++
T Consensus 53 ~~~~~~~t~al~~~~~~~~~--------------~g~~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~ 115 (356)
T cd06451 53 FLLSGSGTGAMEAALSNLLE--------------PGDKVLVGVNGVFGDRWADMAERYGA---DVDVVEKPWGEAVSPEE 115 (356)
T ss_pred EEEecCcHHHHHHHHHHhCC--------------CCCEEEEecCCchhHHHHHHHHHhCC---CeEEeecCCCCCCCHHH
Confidence 67899999998888766532 55678888888887 4577788888 78899988888999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
+++.+++ .++++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+..+.+.. .. .+|+++.++
T Consensus 116 l~~~i~~-----~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~-----~~-~~d~~~~s~ 184 (356)
T cd06451 116 IAEALEQ-----HDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMD-----EW-GVDVAYTGS 184 (356)
T ss_pred HHHHHhc-----cCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCcccccc-----cc-CccEEEecC
Confidence 9999965 247899999999999999999999999999999999999998776543321 11 479999999
Q ss_pred ccccCCCCceEEEEEeccchhhhhcc--CCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANA--TAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~--~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
|||+++|.|+|+++++++ ....... ....++... .. .....
T Consensus 185 ~K~l~~p~g~G~l~~~~~-~~~~~~~~~~~~~~~~~~------------------------------~~-----~~~~~- 227 (356)
T cd06451 185 QKALGAPPGLGPIAFSER-ALERIKKKTKPKGFYFDL------------------------------LL-----LLKYW- 227 (356)
T ss_pred chhccCCCCcceeEECHH-HHHHHHhcCCCCceeecH------------------------------HH-----HHhhh-
Confidence 999999999999999764 3333221 001110000 00 00000
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccc-c-ccchhhHHHHHHHHHhcCccHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQ-C-GRKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
....+. + .+...+.++..+++++..+|+++
T Consensus 228 ------------------------------------------------~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~ 259 (356)
T cd06451 228 ------------------------------------------------GEGYSYPHTPPVNLLYALREALDLILEEGLEN 259 (356)
T ss_pred ------------------------------------------------cccCCCCCCChHHHHHHHHHHHHHHHHhhHHH
Confidence 000000 1 11333556667888888889999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccCC--ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEEEe
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPEF--QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMIGY 395 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~~~ 395 (448)
+.++..++++++.+.|.++ |++++ .++ ..+.+.+...|.+.. ...+.+.|.++ | +++.+
T Consensus 260 ~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~L~~~~g-I~~~~ 321 (356)
T cd06451 260 RWARHRRLAKALREGLEAL-GLKLL-AKPELRSPTVTAVLVPEGVD---------------GDEVVRRLMKRYN-IEIAG 321 (356)
T ss_pred HHHHHHHHHHHHHHHHHHc-CCeec-cCcccCCCceEEEECCCCCC---------------HHHHHHHHHHhCC-EEEec
Confidence 9999999999999999998 99987 432 244444322232222 23788899988 8 55544
Q ss_pred eecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHH
Q psy14299 396 QPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRG 433 (448)
Q Consensus 396 ~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~ 433 (448)
+.... .++++|+|+ +.++|+||+++++++|+++.
T Consensus 322 g~~~~--~~~~iRis~--~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 322 GLGPT--AGKVFRIGH--MGEATREDVLGVLSALEEAL 355 (356)
T ss_pred ccccc--cCCEEEEec--CCCCCHHHHHHHHHHHHHHh
Confidence 32211 136999999 78999999999999999865
No 32
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.95 E-value=2e-25 Score=228.91 Aligned_cols=303 Identities=12% Similarity=0.076 Sum_probs=216.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHH--HHHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSM--LKAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~--~~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
..+++++||.++..++....+ +++.|+++...|++. ...++..|. +++.++.++++.+|++
T Consensus 62 ~vi~~~~gt~a~~~a~~~~~~--------------~Gd~Vlv~~~~~~~~~~~~~~~~~g~---~v~~v~~~~~~~~~~~ 124 (401)
T PLN02409 62 PFIFPTTGTGAWESALTNTLS--------------PGDKVVSFRIGQFSLLWIDQMQRLNF---DVDVVESPWGQGADLD 124 (401)
T ss_pred EEEEeCCcHHHHHHHHHhcCC--------------CCCEEEEeCCCchhHHHHHHHHHcCC---ceEEEECCCCCCCCHH
Confidence 468899999887777654322 567788888899775 466777787 7899998877779999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHH--HHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATV--CEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~i--a~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+++++++++ .++++++|+++|++|+||.+.|+++|+++ ||++|++++||++++.+..+++.. .+ .+|+++
T Consensus 125 ~l~~~l~~~--~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~-----~~-~~D~~~ 196 (401)
T PLN02409 125 ILKSKLRQD--TNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMD-----EW-GVDVAL 196 (401)
T ss_pred HHHHHHhhC--cCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCcccccc-----cc-CccEEE
Confidence 999999752 11258899999999999999999999999 999999999999999887765431 11 479999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCC--cccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATA--ATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
+++|||+++|.|+|+++++++. +....+.. +.|+.. ..
T Consensus 197 ~s~~K~l~~P~G~G~l~~~~~~-~~~~~~~~~~~~~~~~---------------------------------------~~ 236 (401)
T PLN02409 197 TGSQKALSLPTGLGIVCASPKA-LEASKTAKSPRVFFDW---------------------------------------AD 236 (401)
T ss_pred EcCccccCcCCCcceeEECHHH-HHHHhcCCCCCeecCH---------------------------------------HH
Confidence 9999999999999999987653 33332111 111110 00
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
..+. + ..+...-..++...++++..+++++.++|++
T Consensus 237 ~~~~----------------------------------------~----~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e 272 (401)
T PLN02409 237 YLKF----------------------------------------Y----KLGTYWPYTPSIQLLYGLRAALDLIFEEGLE 272 (401)
T ss_pred HHHH----------------------------------------H----hcCCCCCCCccHHHHHHHHHHHHHHHHhhHH
Confidence 0000 0 0000001133455677888889998899999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccC-C--ceeeEE-EEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEE
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPE-F--QCTNIC-FWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMI 393 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~-~--~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~ 393 (448)
++.++..++++++++.|+++ |++++ .+ + .++.++ |.+ |.+++ ..++.+.|.++..+.+
T Consensus 273 ~i~~~~~~l~~~l~~~L~~~-g~~~~-~~~~~~~s~~v~~~~~-p~~~~---------------~~~l~~~l~~~~~i~i 334 (401)
T PLN02409 273 NVIARHARLGEATRLAVEAW-GLKLC-TKKPEWRSDTVTAVVV-PEGID---------------SAEIVKNAWKKYNLSL 334 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCeec-cCChhhcccceEEEeC-CCCCC---------------HHHHHHHHHHhCCEEE
Confidence 99999999999999999987 99988 43 2 243333 432 44443 1257777765533666
Q ss_pred EeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 394 GYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 394 ~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
.++...-+ +.+||+++| .|++++|+.+++++|+++..+++
T Consensus 335 ~~G~~~~~--~~~~Rig~~--g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 335 GLGLNKVA--GKVFRIGHL--GNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred EcCCCccc--CCEEEEcCC--CCCCHHHHHHHHHHHHHHHHHcC
Confidence 55433211 369999997 38899999999999999988765
No 33
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.95 E-value=1.6e-25 Score=226.41 Aligned_cols=298 Identities=13% Similarity=0.129 Sum_probs=207.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH-HHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS-MLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s-~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
..++|+|||+++..++.....+ ++.+++++...|.+ +...++..|. +++.++.++++.+|+++
T Consensus 56 ~i~~t~~~t~al~~~~~~l~~~-------------~~~vlv~~~~~~~~~~~~~a~~~g~---~~~~v~~~~~~~~d~~~ 119 (363)
T TIGR02326 56 SVLLQGSGTFAVEAVIGSAVPK-------------DGKLLVVINGAYGARIVQIAEYLGI---PHHVVDTGEVEPPDVVE 119 (363)
T ss_pred EEEEcCCCHHHHHHHHHhcCCC-------------CCeEEEEeCChhhHHHHHHHHHcCC---ceEEEeCCCCCCCCHHH
Confidence 3789999999988877665432 44556666667766 3577788888 78999998889999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
+++++++. .++++|.+++++|+||.+.|+++|+++||+||++++||++|+.+..+.+.. .+ .+|+++.++
T Consensus 120 l~~~l~~~----~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~-----~~-~~D~~~~s~ 189 (363)
T TIGR02326 120 VEAILAAD----PAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIA-----EL-HIDYLISSA 189 (363)
T ss_pred HHHHHhhC----CCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchh-----hc-CccEEEecC
Confidence 99998752 245688999999999999999999999999999999999999887655422 22 479999999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
|||+++|.|+|+++++++. +........++... ....| +. .+
T Consensus 190 ~K~l~~p~G~G~l~~~~~~-~~~~~~~~~~~~~~-----------------------~~~~~---~~---------~~-- 231 (363)
T TIGR02326 190 NKCIQGVPGFGFVIARQAE-LAACKGNARSLSLD-----------------------LYDQW---RC---------ME-- 231 (363)
T ss_pred ccccccCCcceEEEECHHH-HHHhhcCCCceeec-----------------------HHHHH---HH---------Hh--
Confidence 9999999999999997753 33221110110000 00000 00 00
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc-cHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL-GFRHFVD 321 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~~ 321 (448)
+.-+...|+ .+.+.++++..+++.+..+ |++++.+
T Consensus 232 -------------------------------------------~~~~~~~ft-~~~~~~~al~~al~~l~~~g~~~~~~~ 267 (363)
T TIGR02326 232 -------------------------------------------DNHGKWRFT-SPTHVVHAFAQALLELEKEGGVAARHQ 267 (363)
T ss_pred -------------------------------------------ccCCCCCCC-CcHHHHHHHHHHHHHHHHhhCHHHHHH
Confidence 000001111 1344566667777766454 6999999
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCC--ceeeE-EEEeeccC--CCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEF--QCTNI-CFWFIPVS--LRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ 396 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~--~~~~v-~f~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~ 396 (448)
+..++++++++.|.++ |++++ .++ +.+++ .|.+ |.. +. ...+.+.|.++| +++.++
T Consensus 268 ~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~-~~~~~~~---------------~~~v~~~L~~~g-i~v~~g 328 (363)
T TIGR02326 268 RYQQNQKTLVAGMRAL-GFEPL-LDDEIQSPIITSFYS-PEDPDYR---------------FADFYQRLKEQG-FVIYPG 328 (363)
T ss_pred HHHHHHHHHHHHHHHc-CCeec-cCcccCCceEEEEEC-CCCCCCC---------------HHHHHHHHHHCC-EEEECC
Confidence 9999999999999998 88886 432 34443 3443 221 11 136888898888 555544
Q ss_pred ecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHH
Q psy14299 397 PLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRG 433 (448)
Q Consensus 397 ~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~ 433 (448)
...+. .++|++++ .+++.+|+++++++|+++.
T Consensus 329 ~~~~~---~~iRi~~~--~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 329 KVSQV---DCFRIGNI--GEVDAADITRLLTAIGKAM 360 (363)
T ss_pred cCCCC---CEEEEecC--CCCCHHHHHHHHHHHHHHh
Confidence 33322 68999984 5789999999999998864
No 34
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=2.4e-25 Score=221.35 Aligned_cols=301 Identities=14% Similarity=0.146 Sum_probs=221.1
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH--HHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS--MLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s--~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
.+++.+||.+.-.++..... |++.|++-.+.-++ +.+.++.+|. +++.+..+++-.+|+++
T Consensus 59 ~ll~gsGt~amEAav~sl~~--------------pgdkVLv~~nG~FG~R~~~ia~~~g~---~v~~~~~~wg~~v~p~~ 121 (383)
T COG0075 59 VLLSGSGTLAMEAAVASLVE--------------PGDKVLVVVNGKFGERFAEIAERYGA---EVVVLEVEWGEAVDPEE 121 (383)
T ss_pred EEEcCCcHHHHHHHHHhccC--------------CCCeEEEEeCChHHHHHHHHHHHhCC---ceEEEeCCCCCCCCHHH
Confidence 45567777775555554443 56667666666665 7789999999 79999998888999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
++++|+++ +..+.|.++|++|+||+++|+++|+++||+||+.++||+..+.|..+++...+ ++|+++.++
T Consensus 122 v~~~L~~~----~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~w------giDv~itgS 191 (383)
T COG0075 122 VEEALDKD----PDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEW------GIDVAITGS 191 (383)
T ss_pred HHHHHhcC----CCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhc------CccEEEecC
Confidence 99999853 45779999999999999999999999999999999999987777664443221 479999999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccCCc-ccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANATAA-TYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~~~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+|+|++|+|.+++.++++.+........+ .|++... +.++.+.
T Consensus 192 QK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~------------------------------------~~~~~~~ 235 (383)
T COG0075 192 QKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKK------------------------------------WLKYMEK 235 (383)
T ss_pred chhccCCCccceeEECHHHHHHHhcCCCCceeecHHH------------------------------------HHHHHhh
Confidence 99999999999999988765333222223 2332111 1111100
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
. +..-.=++...++++..+++.+.+||++.+++
T Consensus 236 ~-----------------------------------------------~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~ 268 (383)
T COG0075 236 K-----------------------------------------------GSTPYTPPVNLIYALREALDLILEEGLEARIA 268 (383)
T ss_pred c-----------------------------------------------CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 0 00011122455677888999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCC--ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee--e
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEF--QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ--P 397 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~--~ 397 (448)
++..+++++++.+.++ ||+++ .++ .+++++....|.++++ .++...+.+++.+.+.++ .
T Consensus 269 RH~~~~~a~r~~~~al-Gl~~~-~~~~~~s~tvta~~~P~g~~~---------------~~~~~~~~~~~g~~i~gg~~~ 331 (383)
T COG0075 269 RHRRLAEALRAGLEAL-GLELF-ADPERRSPTVTAIKVPEGVDD---------------KKVRRALLKEYGVEIAGGQGP 331 (383)
T ss_pred HHHHHHHHHHHHHHHc-CCccc-cCcccCCCceEEEECCCCCCc---------------HHHHHHHHHhCCEEecccccc
Confidence 9999999999999999 99998 433 4566666666776652 134446666644655543 2
Q ss_pred cCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHH
Q psy14299 398 LQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDL 438 (448)
Q Consensus 398 ~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~ 438 (448)
+.| .++||++|| +.+.+|+.+++.+|+.+.++++.
T Consensus 332 l~g----kifRIGhMG--~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 332 LKG----KIFRIGHMG--NVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred cCc----cEEEEecCc--cCCHHHHHHHHHHHHHHHHHcCC
Confidence 333 599999995 88999999999999999988754
No 35
>PRK02948 cysteine desulfurase; Provisional
Probab=99.94 E-value=4.1e-25 Score=224.92 Aligned_cols=295 Identities=16% Similarity=0.156 Sum_probs=201.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..+||+|+|++|..++........ .+++.|+++..+|+|+...++.+.....++..++.++++.+|+++|
T Consensus 62 ~i~~~~g~t~a~~~~~~~~~~~~~----------~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l 131 (381)
T PRK02948 62 GIYFTSGGTESNYLAIQSLLNALP----------QNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDL 131 (381)
T ss_pred eEEEeCcHHHHHHHHHHHHHHhcc----------CCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHH
Confidence 478999999999888877654211 1456799999999998777654422222789999988899999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++.+++ ++++|++++++|+||.+.|+++|.++|+++|+++|||++++.+..+.+.. .. .+|+++.++|
T Consensus 132 ~~~l~~------~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~-----~~-~~d~~~~s~~ 199 (381)
T PRK02948 132 ERAITP------DTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVF-----EM-GIDSLSVSAH 199 (381)
T ss_pred HHhcCC------CCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcc-----cC-CCCEEEecHH
Confidence 999854 47899999999999999999999999999999999999998886644321 12 4799999999
Q ss_pred cccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhh
Q psy14299 164 KMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAV 243 (448)
Q Consensus 164 K~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~ 243 (448)
|++ +|.|+|+++++++..+... ..... ....+..+
T Consensus 200 K~~-gp~G~G~l~~~~~~~~~~~-------~~~~~---------~~~~~~~~---------------------------- 234 (381)
T PRK02948 200 KIY-GPKGVGAVYINPQVRWKPV-------FPGTT---------HEKGFRPG---------------------------- 234 (381)
T ss_pred hcC-CCCcEEEEEEcCCCCCCCc-------ccCCC---------CCCCcCCC----------------------------
Confidence 975 5999999998765211110 00000 00000000
Q ss_pred hhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHHH
Q psy14299 244 DCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 323 (448)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 323 (448)
..+.+.++++..+++... ++++++.++.
T Consensus 235 ---------------------------------------------------t~~~~~~~a~~~al~~~~-~~~~~~~~~~ 262 (381)
T PRK02948 235 ---------------------------------------------------TVNVPGIAAFLTAAENIL-KNMQEESLRF 262 (381)
T ss_pred ---------------------------------------------------CccHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 011223334444454433 2577888999
Q ss_pred HHHHHHHHHHhhcCCCeEEecc-CC--c-eeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeec-
Q psy14299 324 VDCSRYFLSQISQRPGFRLVIP-EF--Q-CTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPL- 398 (448)
Q Consensus 324 ~~l~~~~~~~L~~~pg~~l~~~-~~--~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~- 398 (448)
.++++++.+.|+++ |+++... .+ . ..++.|... ++. ..++...|.++| +.+..+..
T Consensus 263 ~~~~~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~~~--~~~---------------~~~~~~~l~~~g-I~v~~g~~c 323 (381)
T PRK02948 263 KELRSYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVTIK--GIE---------------GQYTMLECNRRG-IAISTGSAC 323 (381)
T ss_pred HHHHHHHHHHHhcC-CCCEEEeCCCccCcCCEEEEEeC--CCC---------------HHHHHHhcccCC-EEEEchHhc
Confidence 99999999999998 6665411 11 1 224444432 221 125667787888 55543221
Q ss_pred ----C---------Cc---ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHH
Q psy14299 399 ----Q---------HR---NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDL 438 (448)
Q Consensus 399 ----~---------g~---~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~ 438 (448)
. +. ..++++|+|+ +++||++|+|+++++|+++.+++.+
T Consensus 324 ~~~~~~p~~~~~~~~~~~~~~~~~lRis~--~~~~t~~di~~l~~~l~~~~~~~~~ 377 (381)
T PRK02948 324 QVGKQEPSKTMLAIGKTYEEAKQFVRFSF--GQQTTKDQIDTTIHALETIGNQFYR 377 (381)
T ss_pred CCCCCCCCHHHHHcCCChHHhCceEEEEc--CCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 0 10 0136899999 7899999999999999999876654
No 36
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.94 E-value=1.3e-24 Score=222.35 Aligned_cols=287 Identities=16% Similarity=0.155 Sum_probs=194.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH----HHHHHhCCCCCcEEEEecCC-CCCc
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML----KAAHWLGIGMDNVIRVKTNE-RGQM 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~----~~~~~~g~~~~~v~~v~~~~-~g~i 78 (448)
..++++|+|+++...+.+..... .+++.|++++.+|+|.. ..++..|. +++.++.++ ++.+
T Consensus 79 ~v~~~~~~t~~l~~~~~~~~~~~-----------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~~~~~ 144 (397)
T TIGR01976 79 EVVFGANATSLTFLLSRAISRRW-----------GPGDEVIVTRLDHEANISPWLQAAERAGA---KVKWARVDEATGEL 144 (397)
T ss_pred eEEEeCCHHHHHHHHHHHHHhcC-----------CCCCEEEEcCCchHhHHHHHHHHHHhcCC---EEEEEeccccCCCc
Confidence 47899999999765554432211 26678999999998865 44556677 788888876 6899
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
|++++++.+++ ++++|++++++|++|.+.|+++|+++||+||++++||++|+.+..+.+. ... .+|++
T Consensus 145 ~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~-----~~~-~~d~~ 212 (397)
T TIGR01976 145 HPDDLASLLSP------RTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDV-----QAT-GADFL 212 (397)
T ss_pred CHHHHHHhcCC------CceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCH-----HHc-CCCEE
Confidence 99999999854 4789999999999999999999999999999999999999876554332 111 47999
Q ss_pred EECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 159 SWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 159 ~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
++++|||++ |. +|+++++++ .+....+....+..... ...++.+.+
T Consensus 213 ~~s~~K~~g-~~-~G~l~~~~~-~~~~l~~~~~~~~~~~~----------~~~~~~gt~--------------------- 258 (397)
T TIGR01976 213 TCSAYKFFG-PH-MGILWGRPE-LLMNLPPYKLTFSYDTG----------PERFELGTP--------------------- 258 (397)
T ss_pred EEechhhcC-Cc-eEEEEEcHH-HHhhCCCccccCccCCC----------cchhcCCCC---------------------
Confidence 999999985 54 899888664 33332221111111000 000111111
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc----
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL---- 314 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 314 (448)
+...++++..+++++...
T Consensus 259 ----------------------------------------------------------~~~~~~~l~~al~~~~~~g~~~ 280 (397)
T TIGR01976 259 ----------------------------------------------------------QYELLAGVVAAVDYLAGLGESA 280 (397)
T ss_pred ----------------------------------------------------------CHHHHHHHHHHHHHHHHhCccc
Confidence 011223333333333322
Q ss_pred ----------cHHHHHHHHHHHHHHHHHHhhcCCCeEEeccC----CceeeEEEEeeccCCCccccchhhhhhhhhhhHH
Q psy14299 315 ----------GFRHFVDNAVDCSRYFLSQISQRPGFRLVIPE----FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPR 380 (448)
Q Consensus 315 ----------G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (448)
+++++.++..++++++++.|+++++++++ .+ ...+++.|... +.. ..+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~---------------~~~ 342 (397)
T TIGR01976 281 NGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLY-GVARLAARVPTVSFTVH--GLP---------------PQR 342 (397)
T ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe-CCCCccCCCceEEEEeC--CcC---------------HHH
Confidence 47888999999999999999999889998 43 24666666532 111 236
Q ss_pred HHHHHHhCCcEEEEeeecC--------Cc-ccccEEEEEecCCCCCCHHHHHHHHHHH
Q psy14299 381 IKEKLVLGGTLMIGYQPLQ--------HR-NLHNFFRLVTTCHPASSRQDMDYAIDQI 429 (448)
Q Consensus 381 i~~~L~~~g~~~~~~~~~~--------g~-~~~~~lRis~~~~~~~t~edid~l~~al 429 (448)
+.++|.++| +++...... +. ..++++|+|+ |+++|++|+++|+++|
T Consensus 343 l~~~L~~~g-I~v~~~~~~~~~~~~~~~~~~~~~~iRis~--~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 343 VVRRLADQG-IDAWAGHFYAVRLLRRLGLNDEGGVVRVGL--AHYNTAEEVDRLLEAL 397 (397)
T ss_pred HHHHHHHCC-eEEEeCccchHHHHHHhCCCCCCCeEEEEe--eccCCHHHHHHHHHhC
Confidence 888999998 445432110 11 0126899999 7899999999999875
No 37
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.94 E-value=3.1e-24 Score=219.08 Aligned_cols=158 Identities=15% Similarity=0.135 Sum_probs=132.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec--CCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT--NERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~--~~~g~id~e 81 (448)
..+||+|+|++|..++.+... +++.|+++..+|++...+++..|+ +++.++. ++++.+|++
T Consensus 80 ~~~~~~g~t~a~~~al~~l~~--------------~gd~Vlv~~~~h~s~~~~~~~~G~---~~~~v~~~~~~~~~~d~~ 142 (387)
T PRK09331 80 EARVTHGAREGKFAVMHSLCK--------------KGDYVVLDGLAHYTSYVAAERAGL---NVREVPKTGYPEYKITPE 142 (387)
T ss_pred cEEEeCCHHHHHHHHHHHhcC--------------CCCEEEECCCchHHHHHHHHHcCC---EEEEEeCccCcCCCcCHH
Confidence 467899999999988877643 567799999999999999998888 7889998 678899999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 82 FLEQTIQTSLA-EKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 82 ~Le~~l~~~~~-~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
++++++++..+ .++++++|+++++++++|.+.|+++|+++||+||+++|||+||+.+..+.+... . ++|++++
T Consensus 143 ~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~-----~-g~D~~~~ 216 (387)
T PRK09331 143 AYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKK-----L-GADFIVG 216 (387)
T ss_pred HHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHH-----c-CCCEEEe
Confidence 99999975321 234689999999999999999999999999999999999999999877554321 1 4799999
Q ss_pred CCccccCCCCceEEEEEeccchhhh
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQ 185 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~ 185 (448)
++|||+++|.|+|+++++++ ....
T Consensus 217 s~~K~l~~~~~~G~l~~~~~-~i~~ 240 (387)
T PRK09331 217 SGHKSMAASAPSGVLATTEE-YADK 240 (387)
T ss_pred eCcccccCCCCEEEEEECHH-HHhh
Confidence 99999999999999888654 4444
No 38
>PRK14012 cysteine desulfurase; Provisional
Probab=99.93 E-value=4.8e-24 Score=218.92 Aligned_cols=152 Identities=18% Similarity=0.271 Sum_probs=126.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHh---CCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWL---GIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~---g~~~~~v~~v~~~~~g~id~ 80 (448)
.++||+|||+++.+++.++..... .+++.|++++.+|+++...++.+ |+ +++.++.++++.+|+
T Consensus 68 ~v~~~~g~t~al~~~l~~l~~~~~----------~~gd~Vi~~~~~~~s~~~~~~~~~~~g~---~~~~v~~~~~g~~d~ 134 (404)
T PRK14012 68 EIVFTSGATESDNLAIKGAAHFYQ----------KKGKHIITSKTEHKAVLDTCRQLEREGF---EVTYLDPQSNGIIDL 134 (404)
T ss_pred eEEEeCCHHHHHHHHHHHHHHhhc----------CCCCEEEEecCccHHHHHHHHHHHhCCC---EEEEEccCCCCcCCH
Confidence 378999999999888776543211 25678999999999988777654 66 788999988999999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
++|+++|++ ++++|++++++|++|.+.|+++|.++||++|+++|+|+||+.+..+.+.. .. .+|++++
T Consensus 135 ~~l~~~i~~------~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~-----~~-~~D~~~~ 202 (404)
T PRK14012 135 EKLEAAMRD------DTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLS-----KL-KVDLMSF 202 (404)
T ss_pred HHHHHhcCC------CCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcc-----cC-CCCEEEE
Confidence 999999964 47899999999999999999999999999999999999999888755421 11 4899999
Q ss_pred CCccccCCCCceEEEEEeccc
Q psy14299 161 NPHKMLGAPLQCSILLIKEKG 181 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~ 181 (448)
++||.+ +|.|+|+++++++.
T Consensus 203 s~~K~~-gp~g~G~l~~~~~~ 222 (404)
T PRK14012 203 SAHKIY-GPKGIGALYVRRKP 222 (404)
T ss_pred ehhhcc-CCCceEEEEEecCC
Confidence 999954 68899999998764
No 39
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.93 E-value=6.3e-24 Score=234.06 Aligned_cols=315 Identities=12% Similarity=0.053 Sum_probs=216.0
Q ss_pred cEEEeCcHH----HHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGS----ISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT----~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
.+.|++++| +++++++....+. .|- .++.+|+++..+|.++...+.+.|+ +++.+|++++|.+|
T Consensus 585 ~v~f~pnaga~ge~a~~~vi~~~~~~-------~Gd--~~r~~vli~~~aH~sn~a~a~~~G~---~vv~v~~d~~G~vD 652 (993)
T PLN02414 585 SFSLQPNAGAAGEYAGLMVIRAYHLS-------RGD--HHRNVCIIPVSAHGTNPASAAMCGM---KIVVVGTDAKGNIN 652 (993)
T ss_pred eEEEcCCCcHHHHHHHHHHHHHHHhc-------cCC--CCCCEEEeCCCcCccCHHHHHHCCC---EEEEeccCCCCCcC
Confidence 478999999 8888888777543 110 1234899999999999999999888 89999999999999
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+++|++++++. ..++++|++++++|..|..+|+++|+++||++|+.++||+|+..+...... . +--++|+++
T Consensus 653 le~L~~~i~~~---~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~----p-~~~GaD~~~ 724 (993)
T PLN02414 653 IEELRKAAEAH---KDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTS----P-GFIGADVCH 724 (993)
T ss_pred HHHHHHHHhcc---CCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCC----c-cccCCCEEE
Confidence 99999999752 125789999999999999999999999999999999999999877642221 0 112589999
Q ss_pred ECCccccCCCCc-----eEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHH
Q psy14299 160 WNPHKMLGAPLQ-----CSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 234 (448)
Q Consensus 160 ~s~hK~l~~P~g-----~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g 234 (448)
++.||||++|.| +|++++++. +.. ..|+...... .........+-.++.... .
T Consensus 725 ~s~HK~f~~P~G~GGPg~G~l~~~~~--L~p---~lPg~~v~~~---~~~~~r~~~s~iGt~~~a--------------~ 782 (993)
T PLN02414 725 LNLHKTFCIPHGGGGPGMGPIGVKKH--LAP---FLPSHPVVPT---GGIPRPEKTQPLGTISAA--------------P 782 (993)
T ss_pred ecCCccCCcCcccCCCCeeeEEEchh--hcc---cCCCCccccC---CCcccccCCCCcCCccch--------------h
Confidence 999999987765 999988763 222 1222211100 000000000000110000 0
Q ss_pred HHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc
Q psy14299 235 FRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 314 (448)
Q Consensus 235 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (448)
+ +.-..+...+..++.+|.+
T Consensus 783 ~------------------------------------------------------------g~al~l~~A~~yi~~lG~~ 802 (993)
T PLN02414 783 W------------------------------------------------------------GSALILPISYTYIAMMGSE 802 (993)
T ss_pred h------------------------------------------------------------hhHHHHHHHHHHHHHHCHh
Confidence 0 0012244556677888999
Q ss_pred cHHHHHHHHHHHHHHHHHHhhcCCCeEEeccC--CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEE
Q psy14299 315 GFRHFVDNAVDCSRYFLSQISQRPGFRLVIPE--FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLM 392 (448)
Q Consensus 315 G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~ 392 (448)
|+++..++...+++|++++|++..++... .+ +.++.+.+.+.+ ++.. .+.....+.++|.+.| +.
T Consensus 803 Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~-~~~~~~~hEfv~~~~~--l~~~---------~g~~~~di~krL~d~G-ih 869 (993)
T PLN02414 803 GLTDASKIAILNANYMAKRLEGHYPVLFR-GKNGTCAHEFIIDLRP--FKNT---------AGIEPEDVAKRLMDYG-FH 869 (993)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCcccc-CCCCCeeeeEEEeccc--cccc---------cCCCHHHHHHHHHHcC-cE
Confidence 99999999999999999999885444332 22 334455554431 1100 0011247899999888 43
Q ss_pred EEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHH
Q psy14299 393 IGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDL 438 (448)
Q Consensus 393 ~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~ 438 (448)
.....+... +++|+++ +.+++++|+|+|+++|+.+.++...
T Consensus 870 apt~~~pv~---~~lmiep--TE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 870 APTMSWPVP---GTLMIEP--TESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred EeeeccccC---CEEEEEe--eeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 333223333 7999999 7999999999999999999887654
No 40
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.93 E-value=3.5e-24 Score=224.13 Aligned_cols=314 Identities=15% Similarity=0.125 Sum_probs=204.9
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLE 84 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le 84 (448)
.++..+|+.+.+.++..++.... ..|- .++..|+++...|+++...++..|+ +++.+|.++++.+|+++|+
T Consensus 132 ~l~~~~GA~a~~~~l~~~r~~~~----~~Gd--~~~~~Vlv~~~~hp~~~~~~~~~G~---~vv~v~~~~~~~~D~e~L~ 202 (481)
T PRK04366 132 TLQPAAGAHGELTGLLMIRAYHE----ARGD--TKRTEVIVPDSAHGTNPASAAMAGF---KVVEIPSNEDGLVDLEALK 202 (481)
T ss_pred EEEeCcHHHHHHHHHHHHHHHhh----ccCc--CCCCEEEEcCCccHhHHHHHHHcCC---EEEEeecCCCCCcCHHHHH
Confidence 45556777777766554443211 0110 0234788999999999999999898 7999999888999999999
Q ss_pred HHHHHhhhcCCCcEEEEEeccCCccccc-cCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 85 QTIQTSLAEKKIPLFVNATAGTTVLGAF-DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 85 ~~l~~~~~~~~~~~lVv~~~~~t~tG~~-~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
+++.+ ++++|++++++ ++|.+ +|+++|+++||++|++++||+|+..+.+... +. +-.++|++++++|
T Consensus 203 ~~i~~------~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~--~~---~~~GaD~~~~~~h 270 (481)
T PRK04366 203 AAVGE------DTAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKA--RP---GDMGFDVVHLNLH 270 (481)
T ss_pred hhccc------CCeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcccC--Cc---cccCCCEEEEech
Confidence 99864 47888888877 79988 6899999999999999999999976533211 11 1125899999999
Q ss_pred cccCCCCce-----EEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 164 KMLGAPLQC-----SILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 164 K~l~~P~g~-----G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
|||++|.|+ |+++++++ +.... + +..+..... ....... ..+..+|+.+.
T Consensus 271 K~l~~P~g~Ggp~~G~l~~~~~-~~~~l-p--~~~v~~~g~--~~~l~~~--r~~~i~r~~a~----------------- 325 (481)
T PRK04366 271 KTFSTPHGGGGPGSGPVGVKEE-LAPFL-P--VPVVEKDGD--RYRLDYD--RPKSIGRVRAF----------------- 325 (481)
T ss_pred hhcCCCCCCCCCCeeeeeehhh-hHhhC-C--CCeeeccCC--ceeeccc--ccccCCCcccc-----------------
Confidence 999987554 58888764 33322 1 111110000 0000000 00001111100
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
......+++++..+.+.|.+|+++
T Consensus 326 --------------------------------------------------------t~~~l~~~~a~~~l~~~G~~Gl~~ 349 (481)
T PRK04366 326 --------------------------------------------------------YGNFGVLVRAYAYIRSLGAEGLRE 349 (481)
T ss_pred --------------------------------------------------------cCchHHHHHHHHHHHHHHHHHHHH
Confidence 011244667778888999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeec
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPL 398 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~ 398 (448)
+.++...+++|++++|+++ +++....+....+.|....-..+ +....++.++|.++|+........
T Consensus 350 ~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~~------------g~~~~~v~~~L~~~Gi~~~~~~~p 415 (481)
T PRK04366 350 VSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLKET------------GVRTLDIAKRLLDYGFHPPTIYFP 415 (481)
T ss_pred HHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECcccccc------------CCCHHHHHHHHHHCCccCCccccc
Confidence 9999999999999999987 44431223334444432100010 011347999999999432211111
Q ss_pred CCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHH
Q psy14299 399 QHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDL 438 (448)
Q Consensus 399 ~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~ 438 (448)
.. ..+++|+++ +.++|++|||+|+++|+++.++...
T Consensus 416 ~~--~~~~l~is~--~e~~t~edid~l~~~l~~i~~~~~~ 451 (481)
T PRK04366 416 LI--VPEALMIEP--TETESKETLDAFIAAMKQIAEEAKE 451 (481)
T ss_pred cc--cCCeEEEcc--cCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11 126899999 7899999999999999999877654
No 41
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.93 E-value=6.8e-24 Score=234.70 Aligned_cols=310 Identities=14% Similarity=0.079 Sum_probs=208.6
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLE 84 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le 84 (448)
.+..++|+++++.+++++|.... ..|. .+..+|++++.+|.|+..++...|+ +++.++++.+|.+|+++|+
T Consensus 561 sl~~~~ga~ge~agL~a~r~~~~----~~G~--~~r~~vlis~~aH~snp~sa~~~G~---~vv~v~~d~~G~iD~~~L~ 631 (954)
T PRK05367 561 SLQPNAGAQGEYAGLLAIRAYHE----SRGE--GHRDVCLIPSSAHGTNPASAVMAGM---KVVVVACDENGNIDLDDLR 631 (954)
T ss_pred EECccHHHHHHHHHHHHHHHHhh----ccCC--CCCCEEEEEchhhhhhHHHHHHCCC---EEEEECCCCCCCcCHHHHH
Confidence 34455777889888877775311 1121 1345799999999999999999999 8999999989999999999
Q ss_pred HHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCcc
Q psy14299 85 QTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPHK 164 (448)
Q Consensus 85 ~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~hK 164 (448)
+++++. +.++.+|+++++++..+..+|+++|+++||++|+++|||+|+..+....... +.-++|++++++||
T Consensus 632 ~~i~~~---~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~p-----g~~GADi~~~s~HK 703 (954)
T PRK05367 632 AKAEEH---ADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARP-----GDIGADVSHLNLHK 703 (954)
T ss_pred HHHhcc---CCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCCh-----hhcCCCEEEecCcc
Confidence 999752 2357789999999864445899999999999999999999998665533211 12258999999999
Q ss_pred ccCCCCc-----eEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 165 MLGAPLQ-----CSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 165 ~l~~P~g-----~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
||++|.| +|++++++. +...+ ++.....+ .+....+...+.. +..
T Consensus 704 ~f~~P~G~GGPg~G~l~vr~~--l~p~l---pg~~v~~~------~~~~~~g~v~ta~-----------------~g~-- 753 (954)
T PRK05367 704 TFCIPHGGGGPGVGPIGVKAH--LAPFL---PGHPVQIA------GGETGIGAVSAAP-----------------FGS-- 753 (954)
T ss_pred cCCCCcCCCCCceEEEeeccc--ccccC---CCCccCcC------CCCCCcCcchhHH-----------------HHH--
Confidence 9987776 558888753 22111 11110000 0000000000000 000
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 319 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 319 (448)
-..+...|..++..|.+|++++
T Consensus 754 ----------------------------------------------------------al~~~~a~~yi~~~G~~Glr~~ 775 (954)
T PRK05367 754 ----------------------------------------------------------ASILPISWMYIRMMGAEGLRQA 775 (954)
T ss_pred ----------------------------------------------------------HHHHHHHHHHHHHHCHHHHHHH
Confidence 0113445677778888888888
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEec-cC--CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee
Q psy14299 320 VDNAVDCSRYFLSQISQRPGFRLVI-PE--FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ 396 (448)
Q Consensus 320 ~~~~~~l~~~~~~~L~~~pg~~l~~-~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~ 396 (448)
.++...+++|+.++|++. +++.. .+ +..+.++|.+.+.... .+..+.++.++|.+.|+.... .
T Consensus 776 a~~~~~~A~Yl~~~L~~~--~~~~~~~~~~~~~~e~i~~~~~~~~~-----------~g~~~~di~krL~d~G~~~~t-~ 841 (954)
T PRK05367 776 TEVAILNANYIAKRLKDH--YPVLYTGANGRVAHECILDLRPLKES-----------TGITVDDIAKRLIDYGFHAPT-M 841 (954)
T ss_pred HHHHHHHHHHHHHHHHhh--cCccccCCCCCcccceEEEeeccccc-----------CCCCHHHHHHHHHHCCCeEee-c
Confidence 899999999999999875 44431 11 3355566665421100 011235799999999943322 2
Q ss_pred ecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHH
Q psy14299 397 PLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDL 438 (448)
Q Consensus 397 ~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~ 438 (448)
.+... +.+|+++ +.+++++|+|+|+++|+++.++...
T Consensus 842 ~~pv~---~~l~i~p--tE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 842 SFPVA---GTLMVEP--TESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred CCccC---CEEEEEe--eecCCHHHHHHHHHHHHHHHHHHHH
Confidence 22233 7899999 6899999999999999999887765
No 42
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.93 E-value=8.1e-24 Score=230.57 Aligned_cols=316 Identities=14% Similarity=0.103 Sum_probs=219.9
Q ss_pred CCccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCH
Q psy14299 1 MNLKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 1 ~~~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~ 80 (448)
|+...++.++|++++..+++++|.+. ..+|- .++.+|++|..+|.++-..++..|+ +++.||++++|.+|+
T Consensus 545 md~~Sl~p~aGA~gE~agL~aiR~y~----~~rge--~~R~~vlip~saHgtnPasa~~~G~---~Vv~V~~d~~G~iDl 615 (939)
T TIGR00461 545 FDAISLQPNSGAQGEYAGLRVIRSYH----ESRGE--NHRNICLIPVSAHGTNPASAAMAGM---QVVPVNCDQDGNIDL 615 (939)
T ss_pred CCCcccCCchHHHHHHHHHHHHHHHH----HhcCC--CCCCEEEEEccccCcCHHHHHHCCC---EEEEeccCCCCCcCH
Confidence 45567788999999998888887642 11121 1456799999999999999999999 899999999999999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC-HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP-LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~-l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++|++.+++ .+.++++|++++++| +|.++| +++|+++||++|.+++||+|+..+....... +.-++|+++
T Consensus 616 e~L~~~i~~---~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~P-----g~~GaDi~~ 686 (939)
T TIGR00461 616 VDLKNKAEQ---HGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSP-----GDLGADVCH 686 (939)
T ss_pred HHHHHHHhh---cCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCc-----cccCCCEEE
Confidence 999999975 234688999999999 798877 9999999999999999999997644432211 223689999
Q ss_pred ECCccccCC-----CCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHH
Q psy14299 160 WNPHKMLGA-----PLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 234 (448)
Q Consensus 160 ~s~hK~l~~-----P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g 234 (448)
+|.||+|++ |+|.|++.+|+. +...++.. ......+ .. + .+..+ |
T Consensus 687 ~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~lPg~-~v~~t~d----~~-g-req~I------------------g--- 736 (939)
T TIGR00461 687 LNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFLPKH-DVVSMIT----GI-G-GSKSI------------------G--- 736 (939)
T ss_pred ecCCccCCCCCCCCCCCeEEEEEhhh--chhhcCCC-ccccccc----CC-C-Ccccc------------------c---
Confidence 999999994 455599999864 22222211 1100000 00 0 00000 0
Q ss_pred HHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcccccc-chhhHHHHHHHHHhcC
Q psy14299 235 FRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGR-KVDAFKLWLMWKARGN 313 (448)
Q Consensus 235 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 313 (448)
.. +--|.+ -...+..|..++.+|.
T Consensus 737 -------------a~------------------------------------------s~~~~g~a~~~l~a~~yi~~lG~ 761 (939)
T TIGR00461 737 -------------SV------------------------------------------SAAPYGSASILPISWMYIKMMGN 761 (939)
T ss_pred -------------cc------------------------------------------cccccCcHHHHHHHHHHHHHHCH
Confidence 00 000111 2335677788888888
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccC---CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCc
Q psy14299 314 LGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPE---FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGT 390 (448)
Q Consensus 314 ~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~---~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~ 390 (448)
+|+++..+....+++|+.++|++ +++++... +..+.++|++.|.. +..+..+.++.++|.+.|.
T Consensus 762 ~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~~-----------~~~g~~~~dIakrL~d~G~ 828 (939)
T TIGR00461 762 EGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPLK-----------AKTGIEAIDVAKRLQDYGF 828 (939)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccchh-----------hhcCCCHHHHHHHHHhCCe
Confidence 88888888999999999999997 56766221 34677888765421 1223345689999999994
Q ss_pred EEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHH
Q psy14299 391 LMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDL 438 (448)
Q Consensus 391 ~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~ 438 (448)
.... ..+... +.+=+.+ ...++++|+|+++++|.++.++...
T Consensus 829 hapt-~~~pv~---g~lmiep--TE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 829 HAPT-LSFPVP---GTLMVEP--TESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred eccc-cCCccC---CeEEEEe--eccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3222 221222 4566666 3689999999999999999887765
No 43
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.93 E-value=1.8e-24 Score=238.92 Aligned_cols=313 Identities=15% Similarity=0.071 Sum_probs=203.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHh---CCCCCcEEEEecC-------
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWL---GIGMDNVIRVKTN------- 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~---g~~~~~v~~v~~~------- 73 (448)
.++||+|+|+|+.++...... .+++.|+++..+|.|+....+++ |+ ++..++.+
T Consensus 99 ~VvFtsnaT~alnlva~~l~~-------------~~gd~Iv~t~~eH~svl~~~~~a~~~G~---~v~~v~~~~~~~~~~ 162 (805)
T PLN02724 99 ACVFTSGATAALKLVGETFPW-------------SSESHFCYTLENHNSVLGIREYALEKGA---AAIAVDIEEAANQPT 162 (805)
T ss_pred EEEEeCChHHHHHHHHHHCCC-------------CCCCeEEEeeccccchHHHHHHHHHcCC---eEEeccchhcccccc
Confidence 469999999997666433211 25667888999999977554433 55 68888876
Q ss_pred -CCCCcCH--HHHHHHHHH----hhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc-------C-CEEEEecccccc
Q psy14299 74 -ERGQMIC--SFLEQTIQT----SLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY-------D-LWMHVDACWGGS 138 (448)
Q Consensus 74 -~~g~id~--e~Le~~l~~----~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~-------g-~~l~VD~A~~~~ 138 (448)
..+.+++ ++|++.+++ ....+.++++|++++.+|.+|.+.|++.|..+++.. | ++++||+||+++
T Consensus 163 ~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g 242 (805)
T PLN02724 163 NSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCG 242 (805)
T ss_pred ccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcC
Confidence 3444544 667766421 111123568999999999999999999876555532 3 579999999999
Q ss_pred cccccchhhhhcCCCCccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCc
Q psy14299 139 LIFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKV 218 (448)
Q Consensus 139 ~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (448)
..+++... + .+|++++|+|||+++|.|+|+||++++ .+... .+.++........ .....+. ..+.
T Consensus 243 ~~piDv~~-----~-~~Dfl~~S~HK~~GgP~G~G~L~vr~~-~~~~l---~p~~~GGg~~~~~--~~~~~~~--~~~~- 307 (805)
T PLN02724 243 TSPPDLSR-----Y-PADFVVVSFYKIFGYPTGLGALLVRRD-AAKLL---KKKYFGGGTVAAS--IADIDFV--KRRE- 307 (805)
T ss_pred CCCCChhh-----c-CCCEEEEecceeccCCCCceEEEEehh-hhhhh---cCCccCCCceEEE--eccccee--eccc-
Confidence 99776432 2 489999999999999999999999875 33222 2233321110000 0000000 0000
Q ss_pred hhHHHHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccc--cc
Q psy14299 219 DAFKLWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQ--CG 296 (448)
Q Consensus 219 ~~~~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 296 (448)
....+|+ -.
T Consensus 308 ---------------------------------------------------------------------~~~~rfE~GT~ 318 (805)
T PLN02724 308 ---------------------------------------------------------------------RVEQRFEDGTI 318 (805)
T ss_pred ---------------------------------------------------------------------cHHHHhcCCCc
Confidence 0001111 12
Q ss_pred cchhhHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCC------CeEEeccC-------CceeeEEEEeeccCCCc
Q psy14299 297 RKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRP------GFRLVIPE-------FQCTNICFWFIPVSLRD 363 (448)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~p------g~~l~~~~-------~~~~~v~f~~~~~~~~~ 363 (448)
+.+.++++..+++++...|++.+.+|...|++++.+.|+++| ++++++.. .+.++++|.+...+-..
T Consensus 319 n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~ 398 (805)
T PLN02724 319 SFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSW 398 (805)
T ss_pred chhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCE
Confidence 256688888999999999999999999999999999999986 58888321 25789999876422110
Q ss_pred cccchhhhhhhhhhhHHHHHHH-HhCCcEEEE------eeecC----------------------------CcccccEEE
Q psy14299 364 KVEDETWWSTLSKVAPRIKEKL-VLGGTLMIG------YQPLQ----------------------------HRNLHNFFR 408 (448)
Q Consensus 364 ~~~~~~~~~~~~~~~~~i~~~L-~~~g~~~~~------~~~~~----------------------------g~~~~~~lR 408 (448)
+.......| .+.| |.+. +.... ++ +.+++|
T Consensus 399 -------------v~~~~v~~l~~~~g-I~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~-~~G~vR 463 (805)
T PLN02724 399 -------------VGHREVEKLASLSG-IQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGR-PTGAVR 463 (805)
T ss_pred -------------eCHHHHHHHHHhcC-cEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCc-ccceEE
Confidence 001112233 2334 3222 11110 11 238999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHH
Q psy14299 409 LVTTCHPASSRQDMDYAIDQIELRG 433 (448)
Q Consensus 409 is~~~~~~~t~edid~l~~al~~~~ 433 (448)
+|+ ++|||.+|||+|+++|++.-
T Consensus 464 vS~--g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 464 VSF--GYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred EEc--CccCCHHHHHHHHHHHHHHh
Confidence 999 79999999999999999965
No 44
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.93 E-value=1.4e-23 Score=212.62 Aligned_cols=300 Identities=15% Similarity=0.121 Sum_probs=204.3
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHH--HHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSM--LKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~--~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
.++|++||.++..++..... +++.|++....++.. ...++..|+ ++..+|.++++.+|+++
T Consensus 59 i~~~~~gt~~l~~~~~~l~~--------------~~~~vlv~~~~~~~~~~~~~~~~~g~---~~~~i~~~~~~~~d~~~ 121 (368)
T PRK13479 59 VPLQGSGTFSVEAAIGSLVP--------------RDGKVLVPDNGAYGARIAQIAEYLGI---AHVVLDTGEDEPPDAAE 121 (368)
T ss_pred EEEcCCcHHHHHHHHHhccC--------------CCCeEEEEeCCchHHHHHHHHHHcCC---cEEEEECCCCCCCCHHH
Confidence 56899999998888766543 333444444455443 477777888 78999998888899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
+++++++. .++++|.+++++|++|...|+++|.++||++|++++||++++.+..+.+. ... .+|+++.++
T Consensus 122 l~~~l~~~----~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~-----~~~-~~d~~v~s~ 191 (368)
T PRK13479 122 VEAALAAD----PRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDI-----AEL-GIDALISSA 191 (368)
T ss_pred HHHHHHhC----CCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCccccc-----ccc-CceEEEecC
Confidence 99998652 24678999999999999999999999999999999999988877654332 111 479999999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
|||+++|.|+|+++++++ .+........+|..+.. . .+.
T Consensus 192 ~K~l~g~~G~G~l~~~~~-~~~~~~~~~~~~~~~~~-----------------------~---~~~-------------- 230 (368)
T PRK13479 192 NKCIEGVPGFGFVIARRS-ELEACKGNSRSLSLDLY-----------------------D---QWA-------------- 230 (368)
T ss_pred ccccccCCCceEEEECHH-HHHHhhcCCCCeeecHH-----------------------H---HHh--------------
Confidence 999999999999999765 33332211111110000 0 000
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc-cHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL-GFRHFVD 321 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~~ 321 (448)
...+.....+ ..+.+.+.++..+++.+..+ |++++.+
T Consensus 231 -----------------------------------------~~~~~~~~~~-t~~~~~~~~l~~al~~l~~~~~~~~~~~ 268 (368)
T PRK13479 231 -----------------------------------------YMEKTGQWRF-TPPTHVVAAFYQALLELEEEGGVPARGA 268 (368)
T ss_pred -----------------------------------------hhcccCCCCC-CCcHHHHHHHHHHHHHHHHhhCHHHHHH
Confidence 0000001111 12344566666777765444 6889999
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCC--cee-eEEEEeec-cCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEF--QCT-NICFWFIP-VSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~--~~~-~v~f~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
+..++++++++.|+++ |++++ .++ ..+ +++|.+.. ++.+ ..++.+.|.++| +.+.++.
T Consensus 269 ~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~~~L~~~g-i~v~~g~ 330 (368)
T PRK13479 269 RYANNQRTLVAGMRAL-GFEPL-LDAEIQSPIIVTFHAPADPAYD---------------FKEFYERLKEQG-FVIYPGK 330 (368)
T ss_pred HHHHHHHHHHHHHHHc-CCccc-CCchhcCceEEEEECCCCCCcC---------------HHHHHHHHHHCC-EEEecCC
Confidence 9999999999999998 88876 332 222 34454321 1111 137889999999 4454433
Q ss_pred cCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 398 LQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 398 ~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
.... .++|++++ .+++++|+++++++|+++.++++
T Consensus 331 ~~~~---~~iRis~~--~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 331 LTQV---DTFRIGCI--GDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred CCCC---CEEEEecC--CCCCHHHHHHHHHHHHHHHHHcC
Confidence 2222 58999984 58999999999999999887643
No 45
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.92 E-value=3.5e-23 Score=208.01 Aligned_cols=298 Identities=14% Similarity=0.132 Sum_probs=202.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH-HHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS-MLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s-~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
..++++|||+++..++.....+ ++.+++++...+.+ +...++..|. +++.++.++++.+|+++
T Consensus 52 ~i~~~~~gt~~l~~~~~~~~~~-------------~~~vi~~~~~~~~~~~~~~a~~~g~---~~~~i~~~~~~~~d~~~ 115 (355)
T TIGR03301 52 CVLLQGSGTFAVEATIGSLVPR-------------DGKLLVLINGAYGERLAKICEYLGI---PHTDLNFSEYEPPDLNR 115 (355)
T ss_pred EEEEeCCcHHHHHHHHHhccCC-------------CCeEEEECCCchhhHHHHHHHHcCC---ceEEEecCCCCCCCHHH
Confidence 4568999999988887665432 33445555555544 5567778888 78889988788999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
+++++++. .+++++++++++|++|.+.|+++|+++|++||++++||++++.+..+.+ +... .+|+++.++
T Consensus 116 l~~~l~~~----~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~-----~~~~-~~d~~~~s~ 185 (355)
T TIGR03301 116 IEEALAAD----PDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPID-----IEEL-DVDALIASA 185 (355)
T ss_pred HHHHHHhC----CCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccc-----hhhc-CccEEEecC
Confidence 99999752 3467888999999999999999999999999999999998887754332 1111 479999999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
|||+++|.|+|+++++++ .+........++..+.. ..| . . ..+
T Consensus 186 ~K~l~~~~G~g~~~~~~~-~~~~~~~~~~~~~~~~~-----------------------~~~---~--------~-~~~- 228 (355)
T TIGR03301 186 NKCLEGVPGFGFVIARRD-LLEASAGNARSLYLDLY-----------------------DQW---A--------Y-MEK- 228 (355)
T ss_pred CcccccCCceeEEEECHH-HHHHhhCCCCCceeeHH-----------------------HHH---H--------H-hhh-
Confidence 999999999999998765 33332211111110000 000 0 0 000
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCcc-HHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG-FRHFVD 321 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~~~~~ 321 (448)
.+..-...+...+.++..+++....+| ++++.+
T Consensus 229 ----------------------------------------------~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~ 262 (355)
T TIGR03301 229 ----------------------------------------------TGKWRFTPPTHTVYAFAQALEELEAEGGVPARIA 262 (355)
T ss_pred ----------------------------------------------cCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHH
Confidence 000001223444566667777776666 999999
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCCc--eee-EEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeec
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEFQ--CTN-ICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPL 398 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~~--~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~ 398 (448)
+..++++++.+.|+++ |++++ .++. .++ +.|.+ |.... ....++.+.|.++| +.+.+...
T Consensus 263 ~~~~~~~~~~~~L~~~-g~~~~-~~~~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~l~~~g-i~i~~~~~ 325 (355)
T TIGR03301 263 RYRRNRELLVDGLRAL-GFQPL-LPERWQSPIIVSFLY-PDDPD-------------FDFDDFYQELKERG-FVIYPGKL 325 (355)
T ss_pred HHHHHHHHHHHHHHHc-CCeee-cCCCCCCCcEEEEEC-CCCCc-------------chHHHHHHHHHHCC-EEEECCcc
Confidence 9999999999999997 88876 3332 232 33332 21110 01137888999999 55554432
Q ss_pred CCcccccEEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy14299 399 QHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELR 432 (448)
Q Consensus 399 ~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~ 432 (448)
... +++|+++ +.+++++|+++++++|+++
T Consensus 326 ~~~---~~iRis~--~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 326 TLA---DTFRIGT--IGEIDAADIERLLEAIKDA 354 (355)
T ss_pred ccc---cEEEEec--CCCCCHHHHHHHHHHHHhh
Confidence 222 6899999 5789999999999999864
No 46
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.92 E-value=1.3e-23 Score=218.57 Aligned_cols=288 Identities=13% Similarity=0.155 Sum_probs=193.4
Q ss_pred CcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhC-----CCC--CcEEEEecCCCCCcCHH
Q psy14299 9 PGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLG-----IGM--DNVIRVKTNERGQMICS 81 (448)
Q Consensus 9 ~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g-----~~~--~~v~~v~~~~~g~id~e 81 (448)
++||++|+.++.+..+ +++.|++++.+|.+....+.... ... -.+..++++.+|.+|++
T Consensus 107 ~sgt~an~~v~~al~~--------------~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~ 172 (452)
T PTZ00094 107 YSGSPANFAVYTALLQ--------------PHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYD 172 (452)
T ss_pred CchHHHHHHHHHHhcC--------------CCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHH
Confidence 7899999998877633 56789999999988765542211 000 12445567778999999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+|++.+++. +|++|+++ .+.+|...|+++|+++||++|+++|||+||++|....+..... +..+|+++++
T Consensus 173 ~L~~~l~~~-----~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~---~~~~D~l~~S 242 (452)
T PTZ00094 173 KLEELAKAF-----RPKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSP---FPYADVVTTT 242 (452)
T ss_pred HHHHHHHHh-----CCCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCC---CCCCcEEEcC
Confidence 999999752 35666654 3459999999999999999999999999999999866543221 2258999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+||||++|.| |+++++++ ............++. .+.++
T Consensus 243 ~hK~l~GP~G-g~l~~~~~-~~~~l~~~~~~~~~p--------------~~~G~-------------------------- 280 (452)
T PTZ00094 243 THKSLRGPRS-GLIFYRKK-VKPDIENKINEAVFP--------------GLQGG-------------------------- 280 (452)
T ss_pred CccCCCCCCc-eEEEEecc-cchHHHHhhccccCC--------------CCCCC--------------------------
Confidence 9999999998 77777654 222111000000000 00000
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
.....+.++..++++....+++++.+
T Consensus 281 ------------------------------------------------------~~~~~iaal~~al~~~~~~~~~~~~~ 306 (452)
T PTZ00094 281 ------------------------------------------------------PHNHQIAAIAVQLKEVQSPEWKEYAK 306 (452)
T ss_pred ------------------------------------------------------chHHHHHHHHHHHHHHhChhHHHHHH
Confidence 00122445566777777788899999
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEE-eeecCC
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIG-YQPLQH 400 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~-~~~~~g 400 (448)
+..++++++.+.|++. |++++.+......+.+.+...++. ...+...|.+.| +++. ...+.+
T Consensus 307 ~i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~~~~~---------------~~~~~~~L~~~g-I~vs~~~~p~~ 369 (452)
T PTZ00094 307 QVLKNAKALAAALEKR-GYDLVTGGTDNHLVLVDLRPFGIT---------------GSKMEKLLDAVN-ISVNKNTIPGD 369 (452)
T ss_pred HHHHHHHHHHHHHHhC-CcEEecCCCCCceEeecCCcCCCC---------------HHHHHHHHHHCC-cEEecccCCCC
Confidence 9999999999999986 999872111223333333222222 135667776778 5553 222221
Q ss_pred c--ccccEEEEEecCCCCCC----HHHHHHHHHHHHHHHHH
Q psy14299 401 R--NLHNFFRLVTTCHPASS----RQDMDYAIDQIELRGAE 435 (448)
Q Consensus 401 ~--~~~~~lRis~~~~~~~t----~edid~l~~al~~~~~~ 435 (448)
. ..++++|+|+ |++|| ++||++++++|.++.+.
T Consensus 370 ~~~~~~~~vRis~--~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 370 KSALNPSGVRLGT--PALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred CcCCCCCeEEECC--HHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 1 1136899999 78987 99999999999998875
No 47
>KOG1549|consensus
Probab=99.92 E-value=7.9e-24 Score=209.91 Aligned_cols=154 Identities=19% Similarity=0.236 Sum_probs=129.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
+.+||+|+||||.+++..--+... + + .+..|++...+|.++.++|+.+--....++.+|.+.++.+|.+.+
T Consensus 104 dIiFts~ATEs~Nlvl~~v~~~~~----~-~----~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~ 174 (428)
T KOG1549|consen 104 DIVFTSGATESNNLVLKGVARFFG----D-K----TKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKL 174 (428)
T ss_pred cEEEeCCchHHHHHHHHHhhcccc----c-c----ccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHH
Confidence 479999999998888754333211 1 1 122788899999999999987633223799999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++.|++ +|++|.+.+.+++.|+++|++||+++||++|+.+|+|+||+.|..++|... + .+|++++++|
T Consensus 175 ~~~i~~------~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~e-----l-n~D~~s~s~H 242 (428)
T KOG1549|consen 175 REAIRS------KTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQE-----L-NADFLSISAH 242 (428)
T ss_pred HHhcCC------CceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHH-----c-Cchheeeecc
Confidence 999976 699999999999999999999999999999999999999999999877533 3 4899999999
Q ss_pred cccCCCCceEEEEEec
Q psy14299 164 KMLGAPLQCSILLIKE 179 (448)
Q Consensus 164 K~l~~P~g~G~l~vr~ 179 (448)
||++.|+ +|+||+|.
T Consensus 243 K~ygp~~-iGaLYvr~ 257 (428)
T KOG1549|consen 243 KIYGPPG-IGALYVRR 257 (428)
T ss_pred cccCCCc-ceEEEEcc
Confidence 9998666 99999987
No 48
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.92 E-value=2.9e-23 Score=212.37 Aligned_cols=308 Identities=13% Similarity=0.081 Sum_probs=193.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC-CCCcEEEEecCCCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI-GMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~-~~~~v~~v~~~~~g~id~e~ 82 (448)
.++++++|+.+...++..++... .+++.|++++..|.++..++...+. ...+++.++.++++.+|+++
T Consensus 83 ~v~~~~~g~~~~~~~~~~~~~~~-----------~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~ 151 (398)
T cd00613 83 NASLQDEATAAAEAAGLAAIRAY-----------HKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEA 151 (398)
T ss_pred ceeccCchHHHHHHHHHHHHhcc-----------cCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHH
Confidence 35677777765554444444320 1367899999999999999988871 11168889988778899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCH-HHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPL-DEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l-~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+++++.+ ++++|++++++ ++|.+.|+ ++|+++|++||+++++|++|+.+..+.+... ..+|+++.+
T Consensus 152 l~~~i~~------~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~------~~~d~~~~s 218 (398)
T cd00613 152 LKEEVSE------EVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGE------YGADIVVGN 218 (398)
T ss_pred HHHhcCC------CeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHH------cCCCEEEee
Confidence 9998854 47889999886 68999885 9999999999999999999876554333211 147999999
Q ss_pred CccccCCC-----CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHH
Q psy14299 162 PHKMLGAP-----LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 236 (448)
Q Consensus 162 ~hK~l~~P-----~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~ 236 (448)
+|||+ .| +++|+++++++ +..........+..... ....+.+....+ ....
T Consensus 219 ~~K~~-~p~g~Ggp~~g~l~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---------------~~~~ 274 (398)
T cd00613 219 LQKTG-VPHGGGGPGAGFFAVKKE-LVRFLPGRLVGVTKDAE-------GNRAFRLALQTR---------------EQHI 274 (398)
T ss_pred ccccC-CCCCCCCCceeEEEEhhh-hHhhCCCCeeccccccC-------CCcceEEecccc---------------hhhc
Confidence 99999 66 45778887653 33321110000100000 000000000000 0000
Q ss_pred HHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccc-cchhhHHHHHHHHHhcCcc
Q psy14299 237 HFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCG-RKVDAFKLWLMWKARGNLG 315 (448)
Q Consensus 237 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~G 315 (448)
++ + .+....++ .......++.++..++.+|
T Consensus 275 r~-e------------------------------------------------~~~~~~~~~~~~~~~~a~~~l~~~~~~g 305 (398)
T cd00613 275 RR-E------------------------------------------------KATSNICTGQALLALMAAMYIVYLGPEG 305 (398)
T ss_pred cc-c------------------------------------------------cccccceecHHHHHHHHHHHHHHhCHHH
Confidence 00 0 00000000 1223344556677788899
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEe
Q psy14299 316 FRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGY 395 (448)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~ 395 (448)
++++.++..+++++++++|+++++.... ..+..+.+.|.+... . +....++.+.|.++|+ ++..
T Consensus 306 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~v~~~~~~~--~------------~~~~~~~~~~L~~~gi-~~~~ 369 (398)
T cd00613 306 LKEIAERAHLNANYLAKRLKEVGGVLPF-NGPFFHEFVLRLPPL--Y------------GIRAEDLAKALIDGGF-HAPT 369 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccC-CCCeeEEEEEEcCCc--c------------hHHHHHHHHhhhhcCc-cccc
Confidence 9999999999999999999998655422 233445555543210 0 0012478888999884 3332
Q ss_pred eecCCcccccEEEEEecCCCCCCHHHHHHHHHHH
Q psy14299 396 QPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQI 429 (448)
Q Consensus 396 ~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al 429 (448)
..+.+. +.+|+++ |.++|++|||+++++|
T Consensus 370 ~~~~~~---~~lRis~--~~~~t~edid~~~~~L 398 (398)
T cd00613 370 MYLPVD---GTLMIEP--TETETKEELDALLEAL 398 (398)
T ss_pred cccCCC---CeEEEEc--CCCCCHHHHHHHHHhC
Confidence 212233 7899999 8999999999999875
No 49
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.92 E-value=3e-22 Score=202.54 Aligned_cols=158 Identities=17% Similarity=0.174 Sum_probs=129.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCC--CcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERG--QMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g--~id~e 81 (448)
..++|+|+|+++..++.+... +++.|+++..+|++...+++..|+ +++.++.++++ .+|++
T Consensus 61 ~i~~~~g~t~al~~~l~~~~~--------------~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~ 123 (361)
T cd06452 61 EARVTPGAREGKFAVMHSLCE--------------KGDWVVVDGLAHYTSYVAAERAGL---NVREVPNTGHPEYHITPE 123 (361)
T ss_pred eEEEeCCHHHHHHHHHHHhcC--------------CCCEEEEcCCcchHHHHHHHhcCC---EEEEEecCCCCCcccCHH
Confidence 478999999998888766543 567799999999999988888888 78899988665 89999
Q ss_pred HHHHHHHHhhhc-CCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 82 FLEQTIQTSLAE-KKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 82 ~Le~~l~~~~~~-~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
++++++++..+. +.++++|++++++|++|...|+++|.++||++|++++||+||+.+..+.+... . .+|+++.
T Consensus 124 ~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~-----~-~~d~~~~ 197 (361)
T cd06452 124 GYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKE-----L-GADFIVG 197 (361)
T ss_pred HHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHH-----c-CCCEEEe
Confidence 999999753221 23588999999999999999999999999999999999999998765433211 1 3799999
Q ss_pred CCccccCCCCceEEEEEeccchhhh
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQ 185 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~ 185 (448)
++||++++|.++|+++++++ +...
T Consensus 198 s~~K~l~~~~~~G~l~~~~~-~~~~ 221 (361)
T cd06452 198 SGHKSMAASAPIGVLATTEE-WADI 221 (361)
T ss_pred cCCccccCCCCeEEEEECHH-HHHH
Confidence 99999999999999888653 4444
No 50
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.92 E-value=2.3e-23 Score=212.00 Aligned_cols=301 Identities=10% Similarity=0.071 Sum_probs=194.7
Q ss_pred cEEEeC-cHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH--HHHhCCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLP-GGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA--AHWLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~-ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~--~~~~g~~~~~v~~v~~~~~g~id~ 80 (448)
.++|++ |||+++..++....+. ++..|+. ..+|.+.... ++..|+. +++.++.++++.+|+
T Consensus 68 ~v~~~~gs~T~~~~~~~~~l~~~-------------~~~~vi~-~g~f~~~~~~~~~~~~g~~--~v~~~~~~~g~~~d~ 131 (378)
T PRK03080 68 EVGIVPGSDTGAWEMALWSLLGA-------------RRVDHLA-WESFGSKWATDVVKQLKLE--DPRVLEADYGSLPDL 131 (378)
T ss_pred eEEEECCchHHHHHHHHHhcCCC-------------CcceEEE-eCHHHHHHHHHHHhhcCCC--CceEeccCCCCCCCH
Confidence 578886 8888866665443211 2334444 4688774432 3445541 477788777778887
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
++++ . ++.|.++|.+|.||.+.|+++|++ |+||++++||++|+.|..+++.. .+|++++
T Consensus 132 ~~i~----~-------~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~--------~iD~~~~ 190 (378)
T PRK03080 132 SAVD----F-------DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWS--------KLDVYTF 190 (378)
T ss_pred hhcC----C-------CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHH--------HCcEEEE
Confidence 7632 1 346999999999999999999999 88999999999999999987743 2599999
Q ss_pred CCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
++||||++|.|+|+++++++. +....+...++.. +..+++.. +.. .++
T Consensus 191 s~~K~l~~P~G~g~l~v~~~~-~~~~~p~~~~~~~------~~~~~~~~------------------------~~~-~~~ 238 (378)
T PRK03080 191 SWQKVLGGEGGHGMAILSPRA-VERLESYTPARPI------PKFFRLTK------------------------GGK-AIE 238 (378)
T ss_pred ehhhhCCCCCceEEEEECHHH-HHhhhcccCCCCC------chhheecc------------------------chH-Hhh
Confidence 999999999999999998763 3332211111000 00000000 000 000
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc-cHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL-GFRHF 319 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~ 319 (448)
.. | ......-.+...+.++..+++++.++ |++.+
T Consensus 239 ~~---------------------------------~------------~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i 273 (378)
T PRK03080 239 NS---------------------------------F------------KGQTINTPSMLTVEDYLDQLDWANSIGGLDAL 273 (378)
T ss_pred hh---------------------------------h------------cCCcccCchHHHHHHHHHHHHHHHHcCCHHHH
Confidence 00 0 00000112244456667899999888 89999
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEeccCC--ce-eeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee
Q psy14299 320 VDNAVDCSRYFLSQISQRPGFRLVIPEF--QC-TNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ 396 (448)
Q Consensus 320 ~~~~~~l~~~~~~~L~~~pg~~l~~~~~--~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~ 396 (448)
.+|...+++++++.|+++++++++...+ +. ++++|++.. .+ ......+...|.+++++ +..+
T Consensus 274 ~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~--~~------------~~~~~~~~~~l~~~~i~-v~~g 338 (378)
T PRK03080 274 IARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVD--AQ------------AAVDAAAVAKLLRENGA-VDIE 338 (378)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCC--ch------------HHHHHHHHHHHHHcCCe-eccc
Confidence 9999999999999999997788762112 23 466665321 00 00112456667677643 3322
Q ss_pred ecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 397 PLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 397 ~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
.+.. ..+.+|+|+ |.|||++||++++++|+++.++..
T Consensus 339 ~~~~--~~~~vRis~--~~~~t~~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 339 PYRD--APNGLRIWC--GPTVEPADVEALTPWLDWAFERLK 375 (378)
T ss_pred cccC--CCCcEEEec--CCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1111 126899999 789999999999999999876543
No 51
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.91 E-value=1.1e-22 Score=211.59 Aligned_cols=304 Identities=16% Similarity=0.149 Sum_probs=195.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHH----hCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHW----LGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~----~g~~~~~v~~v~~~~~g~id 79 (448)
.+++|+|||+++..++.+.+.. +++.|++++.+|.++...++. .|+ +++.+|.+++ .+|
T Consensus 131 ~v~~~~g~t~~~~~~~~a~~~~-------------~g~~Vlv~~~~~~~~~~~~~~~~~~~G~---~~~~v~~~~~-~~d 193 (447)
T PRK00451 131 NASMYDGATALAEAALMAVRIT-------------KRKKVLVSGAVHPEYREVLKTYLKGQGI---EVVEVPYEDG-VTD 193 (447)
T ss_pred eEEecCcHHHHHHHHHHHHHhc-------------CCCEEEEeCccCHHHHHHHHHHHHhCCc---EEEEecCCCC-CCC
Confidence 4779999998655444433322 456788999999999988775 466 7899999888 999
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEE--ecccccccccccchhhhhcCCCCccE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHV--DACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~V--D~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
++++++++.+ ++++|+++++ |++|.++|+++|+++||++|+|++| |.. +.+.+..+ +...+|+
T Consensus 194 ~~~l~~~i~~------~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~~~-------~~~~~D~ 258 (447)
T PRK00451 194 LEALEAAVDD------DTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLKPP-------GEYGADI 258 (447)
T ss_pred HHHHHHhcCC------CeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCCCc-------ccCCCCE
Confidence 9999999854 4788999987 7899999999999999999999998 543 23322111 1125899
Q ss_pred EEECCccc-----cCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhCh
Q psy14299 158 VSWNPHKM-----LGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 232 (448)
Q Consensus 158 ~~~s~hK~-----l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 232 (448)
++.++||| +++| ++|+++++++ +.... ++.+.......... ..+.+....+
T Consensus 259 ~~~s~~k~~~~~~~~Gp-g~G~l~~~~~-~~~~~----~~~~~g~~~~~~~~---~~~~~~~~~~--------------- 314 (447)
T PRK00451 259 VVGEGQPLGIPLSFGGP-YLGFFATRKK-LVRQM----PGRLVGETVDADGK---RGFVLTLQAR--------------- 314 (447)
T ss_pred EEECCCcCCCCCCCCCC-CchHHHhhHH-HHhhC----CCCEeeeecccCCC---eeeEeecccc---------------
Confidence 99999997 5666 7999988664 33321 11111100000000 0000000000
Q ss_pred HHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccc-hhhHHHHHHHHHh
Q psy14299 233 LGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRK-VDAFKLWLMWKAR 311 (448)
Q Consensus 233 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 311 (448)
.+..-...+....|.+. ...++.+.++++.
T Consensus 315 -------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~ 345 (447)
T PRK00451 315 -------------------------------------------------EQHIRREKATSNICTNQALNALAAAIYMSLL 345 (447)
T ss_pred -------------------------------------------------ccccccccccccccccHHHHHHHHHHHHHHH
Confidence 00000000111122222 2224555677888
Q ss_pred cCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcE
Q psy14299 312 GNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTL 391 (448)
Q Consensus 312 ~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~ 391 (448)
+.+|++++.++..++++++.++|++++|++++ ..+....+++.+ + .. ..++.++|.++|++
T Consensus 346 ~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~v~~-~--~~---------------~~~~~~~L~~~gi~ 406 (447)
T PRK00451 346 GPEGLRELAEQNHQKAHYLAERLAEIGGVELF-DGPFFNEFVVRL-P--KP---------------AEEVNEALLEKGIL 406 (447)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec-CCCeEEEEEEec-C--CC---------------HHHHHHHHHhcCCC
Confidence 99999999999999999999999999999986 333333333432 1 11 13788999998854
Q ss_pred EEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHH
Q psy14299 392 MIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRG 433 (448)
Q Consensus 392 ~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~ 433 (448)
...+....+....+++|+|+ +.++|++|+++++++|+++.
T Consensus 407 ~~~~~~~~~~~~~~~~rvs~--~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 407 GGYDLGRYYPELGNHLLVCV--TEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred CCcccccccCCcCCEEEEec--CCCCCHHHHHHHHHHHHHHh
Confidence 21111111111136899999 78999999999999998764
No 52
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.91 E-value=2.7e-22 Score=202.14 Aligned_cols=156 Identities=23% Similarity=0.256 Sum_probs=126.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.++||+|+|+++..++........ + ..++.|+++..+|+++......+.....+++.++.++++.+|+++|
T Consensus 61 ~v~~~~g~t~a~~~~l~~l~~~~~----~-----~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l 131 (353)
T TIGR03235 61 EVIFTSGATESNNLAILGLARAGE----Q-----KGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDEL 131 (353)
T ss_pred eEEEeCCHHHHHHHHHHHHHHhcc----c-----CCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHH
Confidence 589999999998888766554200 0 0226789999999998877654322122789999988899999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++.+++ ++++|++++++|++|.+.|+++|+++||++|+++|||++|+.+..+.+... ..+|++++++|
T Consensus 132 ~~~l~~------~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~------~~~D~~~~s~~ 199 (353)
T TIGR03235 132 ADAIRP------DTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSA------DRIDLISCSGH 199 (353)
T ss_pred HHhCCC------CCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccc------cCCCEEEeehh
Confidence 998854 478999999999999999999999999999999999999999988655321 24899999999
Q ss_pred cccCCCCceEEEEEeccc
Q psy14299 164 KMLGAPLQCSILLIKEKG 181 (448)
Q Consensus 164 K~l~~P~g~G~l~vr~~~ 181 (448)
||+ +|.|+|+++++++.
T Consensus 200 K~~-gp~g~g~l~~~~~~ 216 (353)
T TIGR03235 200 KIY-GPKGIGALVIRKRG 216 (353)
T ss_pred hcC-CCCceEEEEEccCc
Confidence 984 69999999998763
No 53
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.91 E-value=1.5e-21 Score=198.23 Aligned_cols=159 Identities=16% Similarity=0.133 Sum_probs=127.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
...+++||+++|..++.+... +++.|+++...|++...+++..|. +++.+|+++ ++.+|++
T Consensus 68 ~~~i~~g~~~a~~~~~~~l~~--------------~gd~Vl~~~~~h~s~~~~~~~~g~---~~~~~~~~~~~~~~~d~~ 130 (370)
T TIGR02539 68 EARVTHGAREGKFAVMHALCK--------------EGDWVVLDGLAHYTSYVAAERAGL---NVKEVPHTGHPEYKVDPE 130 (370)
T ss_pred ceEEECChHHHHHHHHHHhhC--------------CCCEEEECCcccHHHHHHHHHcCC---EEEEEecCCcccCCcCHH
Confidence 356789999999888776543 567799999999999999988888 788899863 5789999
Q ss_pred HHHHHHHHhhhc-CCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 82 FLEQTIQTSLAE-KKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 82 ~Le~~l~~~~~~-~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
+|++++++.... ..++++|+++++++++|.+.|+++|.++|++||++++||+||+.+....+.. .. .+|+++.
T Consensus 131 ~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~-----~~-~~di~v~ 204 (370)
T TIGR02539 131 GYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAK-----EI-GADFIVG 204 (370)
T ss_pred HHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHH-----Hc-CCCEEEe
Confidence 999999752211 1357899999999999999999999999999999999999999875433221 11 3799999
Q ss_pred CCccccCCCCceEEEEEeccchhhhh
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQA 186 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~ 186 (448)
++||+++++.++|+++.++ ++....
T Consensus 205 s~sK~~~~~g~~G~l~~~~-~~i~~l 229 (370)
T TIGR02539 205 SGHKSMAASGPCGVLGMSE-EWEDIV 229 (370)
T ss_pred eCcccccCCCCEEEEEECH-HHHhhh
Confidence 9999999877789888755 444443
No 54
>KOG1383|consensus
Probab=99.90 E-value=2.6e-22 Score=198.54 Aligned_cols=303 Identities=20% Similarity=0.226 Sum_probs=229.3
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC-CCCCcCHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN-ERGQMICS 81 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~-~~g~id~e 81 (448)
..|..|+|||+|++++....+.+... ..|+ ....++++...|.++.+.+++.++ +++.||.+ .+.++|+.
T Consensus 139 ~~g~~t~G~Ses~l~~~k~~~~~r~~---~k~I---~~p~iv~~~~v~~a~eK~a~yf~v---~l~~V~~~~~~~~~D~~ 209 (491)
T KOG1383|consen 139 SCGCGTVGGSESGLAAKKSYRNRRKA---QKGI---DKPNIVTPQNVHAAFEKAARYFEV---ELREVPLDEGDYRVDPG 209 (491)
T ss_pred ccCccccccchHHHHHHHHHHHHHHh---ccCC---CCccccchHHHHHHHHHHHhhEEE---EEEeeeccccceEecHH
Confidence 56788999999988877666654321 1243 234578899999999999999999 89999998 57799999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHH-cCCEEEEeccccccccc-----ccchhhhhcCCCCc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEK-YDLWMHVDACWGGSLIF-----SEKYSFVLKGINRA 155 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~-~g~~l~VD~A~~~~~~~-----~~~~~~~~~~~~~a 155 (448)
.+.+.+++ +++.|+.+.+++++|.++|+++|.++.-+ +++++|||++.|+...+ ..++++.+. .+
T Consensus 210 k~~~~i~e------Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p---~V 280 (491)
T KOG1383|consen 210 KVVRMIDE------NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVP---GV 280 (491)
T ss_pred HHHHHhcc------ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCC---Cc
Confidence 99999987 58999999999999999999999999999 99999999999987764 123444333 46
Q ss_pred cEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCc-hhHHHHHHHHHhChHH
Q psy14299 156 NSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKV-DAFKLWLMWKARGNLG 234 (448)
Q Consensus 156 D~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~g 234 (448)
-+++.++||...+|.|+|+++.|++..+...+-....|... .+...++.++|+. .....|+++-.+|.+|
T Consensus 281 ~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg---------~y~s~TlngSR~g~~va~~wa~~~~lG~eG 351 (491)
T KOG1383|consen 281 TSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGG---------IYASPTLNGSRPGSQVAAQWAALMSLGEEG 351 (491)
T ss_pred eeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCc---------cccCcccccCCcccHHHHHHHHHHHhhHHH
Confidence 79999999999999999999999988765544334444432 3455677788875 4566888888888888
Q ss_pred HHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc
Q psy14299 235 FRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 314 (448)
Q Consensus 235 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (448)
+++..++
T Consensus 352 Y~~~~~~------------------------------------------------------------------------- 358 (491)
T KOG1383|consen 352 YRENTQN------------------------------------------------------------------------- 358 (491)
T ss_pred HHHHHHH-------------------------------------------------------------------------
Confidence 8775555
Q ss_pred cHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEE
Q psy14299 315 GFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIG 394 (448)
Q Consensus 315 G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~ 394 (448)
+.+.++.+++.|++++++.++ .+|..+++.|.-. .++ --++.+.|.+.||++-.
T Consensus 359 --------ive~~~~l~egie~i~~i~i~-gkp~vs~~~~~s~--~~~---------------i~elsd~l~~~GW~lna 412 (491)
T KOG1383|consen 359 --------IVETARKLREGIENIKGIKIV-GKPLVSFILFGSN--DVN---------------IFELSDLLRKKGWILNA 412 (491)
T ss_pred --------HHHHHHHHHHhhhccccceec-CCCcEEEEEccCC--ccc---------------hhhhhHHHHhcCcCccc
Confidence 445588899999999999999 7777776666311 111 12788999999988766
Q ss_pred eeecCCcccccEEEEEecCCCCCCHHH-HHHHHHHHHHHHHHhHHh
Q psy14299 395 YQPLQHRNLHNFFRLVTTCHPASSRQD-MDYAIDQIELRGAEVDLE 439 (448)
Q Consensus 395 ~~~~~g~~~~~~lRis~~~~~~~t~ed-id~l~~al~~~~~~~~~~ 439 (448)
.+.+.+ +-++++ -.+.++| .|+|+..|+++.+++...
T Consensus 413 lq~P~a------~Hi~vt--~~~~~~~~A~~~v~Di~~~~~el~~~ 450 (491)
T KOG1383|consen 413 LQFPAA------IHICVT--RVHAREDVADRFVADIRKVVEELKSL 450 (491)
T ss_pred cCCCCc------eEEEEE--eeeccHHHHHHHHHHHHHHHHHHHhC
Confidence 554433 445553 3334444 688999999988887653
No 55
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.90 E-value=3.2e-21 Score=197.06 Aligned_cols=288 Identities=16% Similarity=0.176 Sum_probs=189.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.+++++||++||..++.+..+ +++.|++++.+|+++..++++.+. +...++ .+|+++|
T Consensus 100 ~~ii~~~~~~a~~~~~~~l~~--------------~gd~vi~~~~~~~s~~~~~~~~~~---~~~~~~-----~~d~~~l 157 (393)
T TIGR01822 100 DTILYASCFDANGGLFETLLG--------------AEDAIISDALNHASIIDGVRLCKA---KRYRYA-----NNDMADL 157 (393)
T ss_pred cEEEECchHHHHHHHHHHhCC--------------CCCEEEEeccccHHHHHHHHhcCC---ceEEeC-----CCCHHHH
Confidence 467889999998866655422 677899999999999999888776 343333 3699999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchh-hhhcCC-CCccEEEEC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYS-FVLKGI-NRANSVSWN 161 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~-~~~~~~-~~aD~~~~s 161 (448)
++.+++..+.+.++++|++.+..+++|.+.|+++|+++|++||+++++|++|+.+........ ....++ ..+|+++.+
T Consensus 158 ~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s 237 (393)
T TIGR01822 158 EAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGT 237 (393)
T ss_pred HHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEE
Confidence 999986433333678999999999999999999999999999999999999987664221100 001111 247999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+||+++++. .|+++.+ +.+..........+.... +.. ...
T Consensus 238 ~sK~l~g~r-~G~~~~~-~~~~~~l~~~~~~~~~~~-----------------~~~--~~~------------------- 277 (393)
T TIGR01822 238 LGKALGGAS-GGFTTAR-KEVVELLRQRSRPYLFSN-----------------SLP--PAV------------------- 277 (393)
T ss_pred ChHHhhCCC-cEEEEeC-HHHHHHHHHhCccceecC-----------------CCC--HHH-------------------
Confidence 999998764 5777664 344433322111221110 000 000
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
+.+...+++.. ++.+++.+
T Consensus 278 -----------------------------------------------------------~~a~~~al~~~--~~~~~~~~ 296 (393)
T TIGR01822 278 -----------------------------------------------------------VGASIKVLEML--EASNELRD 296 (393)
T ss_pred -----------------------------------------------------------HHHHHHHHHHH--hcCHHHHH
Confidence 00111122222 13456778
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecC-C
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQ-H 400 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~-g 400 (448)
+..++++++.+.|+++ |+++. ++..+++.+.+.+ .. ...++.+.|.++| +++...... .
T Consensus 297 ~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~i~~~~-~~---------------~~~~l~~~L~~~g-I~v~~~~~~~~ 356 (393)
T TIGR01822 297 RLWANTRYFRERMEAA-GFDIK--PADHPIIPVMLYD-AV---------------LAQRFARRLLEEG-IYVTGFFYPVV 356 (393)
T ss_pred HHHHHHHHHHHHHHHc-CCCCC--CCCCCEEEEEeCC-HH---------------HHHHHHHHHHHCC-eeEeeeCCCCC
Confidence 8889999999999986 88764 3334455443211 00 1247888999998 444432211 1
Q ss_pred cccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 401 RNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 401 ~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
......+|+++ +.++|++||++++++|+++.+++
T Consensus 357 ~~~~~~iRis~--~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 357 PKGQARIRVQI--SAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred CCCCceEEEEE--CCCCCHHHHHHHHHHHHHHHHHh
Confidence 11125799999 78999999999999999987654
No 56
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.90 E-value=8.9e-22 Score=201.73 Aligned_cols=164 Identities=16% Similarity=0.183 Sum_probs=122.9
Q ss_pred cEEEeCcHH-HHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec---CCCCCcC
Q psy14299 4 KPFLLPGGS-ISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT---NERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT-~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~---~~~g~id 79 (448)
.+++++||| +++.+++.+++.+. .+++.|+++..+|.|+.+++.+.|+ +++.+++ ++++.+|
T Consensus 125 ~a~~v~~~Tg~al~laL~alr~~~-----------~~gd~VI~p~~th~S~~kAi~~~G~---~pv~Vd~~~d~~~~~iD 190 (444)
T TIGR03531 125 SAFVVPLATGMSLSLCLSALRHKR-----------PKAKYVIWPRIDQKSCIKAISTAGF---EPRVIETVLDGDELTTD 190 (444)
T ss_pred EEEEECCHHHHHHHHHHHHcCCcC-----------CCCCEEEEECcChHHHHHHHHHcCC---eEEEeeeeecCcCCCcC
Confidence 489999999 89988887766420 1345688888999999999999999 6777774 3567999
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEecc-CCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCC--CCcc
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAG-TTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGI--NRAN 156 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~-~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~--~~aD 156 (448)
+++|+++|.+. +.+.++++++.+ ++..|..+|+++|+++|++||+|+|+|+||+.+........ -.+. +.+|
T Consensus 191 ~e~Le~aIt~~---~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~--~~g~~~Grad 265 (444)
T TIGR03531 191 VEDIERAIEEI---GPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELI--NKAIKVGRVD 265 (444)
T ss_pred HHHHHHHHHhc---cCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhh--hccccccCCC
Confidence 99999999752 112344444443 44456899999999999999999999999997543221110 0122 2479
Q ss_pred EEEECCccccCCCCceEEEEEeccchhhhh
Q psy14299 157 SVSWNPHKMLGAPLQCSILLIKEKGLLHQA 186 (448)
Q Consensus 157 ~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~ 186 (448)
++++++||++.+|.++|+++++++++....
T Consensus 266 ~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i 295 (444)
T TIGR03531 266 AVVSSTDKNFMVPVGGAIIYSFDENFIQEI 295 (444)
T ss_pred eEEEeCccCCCCCCCEEEEEECCHHHHHHH
Confidence 999999999999999888888887765443
No 57
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.89 E-value=2.4e-21 Score=194.49 Aligned_cols=279 Identities=15% Similarity=0.144 Sum_probs=206.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.+++-++|-.||+-.+.+... +++.|+.++..|.|+.+++++.+. +++..+++ |+++|
T Consensus 101 ~al~f~SGy~AN~~~i~~l~~--------------~~dli~~D~lnHASiidG~rls~a---~~~~f~Hn-----D~~~L 158 (388)
T COG0156 101 AALLFSSGFVANLGLLSALLK--------------KGDLIFSDELNHASIIDGIRLSRA---EVRRFKHN-----DLDHL 158 (388)
T ss_pred cEEEEcccchhHHHHHHHhcC--------------CCcEEEEechhhhhHHHHHHhCCC---cEEEecCC-----CHHHH
Confidence 356778889998888777655 578899999999999999998888 78888887 99999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhh--cCCC--CccEEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVL--KGIN--RANSVS 159 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~--~~~~--~aD~~~ 159 (448)
|+.|++....+.++++|++....++.|.+.||++|++++++||++++||.||+.|.+--.. +..+ .++. .+|+++
T Consensus 159 e~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~G-rG~~e~~g~~~~~vdi~~ 237 (388)
T COG0156 159 EALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNG-RGLAEHFGLEPEEVDIIV 237 (388)
T ss_pred HHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCC-ccHHHHhCCCCccceEEE
Confidence 9999885433325789999999999999999999999999999999999999999873211 1111 1232 368999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
.++.|.|+ +.|.++..+............+|+++.+.+ +..+.
T Consensus 238 gTlsKAlG---s~Gg~v~g~~~~~d~L~~~ar~~ifStalp----------------P~~aa------------------ 280 (388)
T COG0156 238 GTLGKALG---SSGGYIAGSAALIDYLRNRARPFIFSTALP----------------PAVAA------------------ 280 (388)
T ss_pred EEchhhhc---ccCceeeCcHHHHHHHHHhCCceeccCCCC----------------HHHHH------------------
Confidence 99999998 467777777777777767778888765521 00000
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 319 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 319 (448)
+...+++.+. -..+.
T Consensus 281 ---------------------------------------------------------------a~~~al~~l~--~~~~~ 295 (388)
T COG0156 281 ---------------------------------------------------------------AALAALRILE--EGPER 295 (388)
T ss_pred ---------------------------------------------------------------HHHHHHHHHH--hCHHH
Confidence 0111111111 12456
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEE----e
Q psy14299 320 VDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIG----Y 395 (448)
Q Consensus 320 ~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~----~ 395 (448)
.++..++.+++++.++.. ++.+ .+..++++.+.+.++ ..+.++.+.|+++| +++. |
T Consensus 296 r~~L~~~~~~~~~~~~~~-~~~~--~~s~s~I~pv~~gd~----------------~~a~~~s~~l~~~G-i~v~~i~~P 355 (388)
T COG0156 296 RERLQELAAFFRSLLKAL-GLVL--LPSESPIIPVILGDE----------------ERALEASRALLEEG-IYVSAIRPP 355 (388)
T ss_pred HHHHHHHHHHHHHHHHhc-CCcc--CCCCCCeeeeEeCCH----------------HHHHHHHHHHHHCC-eeEeeecCC
Confidence 677888899999777765 7765 356678887754321 12457888899888 5443 5
Q ss_pred eecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy14299 396 QPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELR 432 (448)
Q Consensus 396 ~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~ 432 (448)
+++.|. ..+|+++ +..+|++||+++++++.++
T Consensus 356 TVp~gt---arlRi~l--ta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 356 TVPKGT---ARLRITL--TAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCCCc---ceEEEEe--cCCCCHHHHHHHHHHHHhh
Confidence 566666 8999999 7899999999999999875
No 58
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.89 E-value=4.1e-21 Score=208.35 Aligned_cols=317 Identities=13% Similarity=0.065 Sum_probs=206.7
Q ss_pred CccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 2 NLKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 2 ~~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
+..-+.-.+|+++++.++++.|.+. ..+|-+ .+.+|+++..+|.++...+...|+ +++.+|.+++|.+|++
T Consensus 559 d~~Sl~p~sGA~gE~A~Lmair~yh----~~~Ge~--~r~~vLIp~saHgtNpasa~~~Gi---eVv~Vp~D~~G~iDle 629 (954)
T PRK12566 559 DAICMQPNSGAQGEYAGLLAIRRYH----RSRGQS--QRDICLIPSSAHGTNPASAQMAGM---RVVIVECDPDGNVDLD 629 (954)
T ss_pred CeEeecCCchHHHHHHHHHHHHHHH----HhcCCC--CCCEEEecccccccCHHHHHHCCC---EEEEeccCCCCCcCHH
Confidence 3343344578888888887766532 112311 356799999999888877888888 8999999999999999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+|++.+++. ..++.+|+++++++..+..+|+++|+++||++|++++||||+..+....+.- ..+ ++|+++++
T Consensus 630 ~L~a~I~~~---~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~P----g~~-GADi~~~s 701 (954)
T PRK12566 630 DLKAKAAAA---GDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARP----ADI-GADVSHMN 701 (954)
T ss_pred HHHHHhhcc---CCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCCh----hhc-CCCEEEec
Confidence 999999742 1357789999999977777889999999999999999999998665544321 112 58999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccC-cccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQD-KFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
+|||+++|.|.|..+++.-...... .+|+.+.. ....+. ... +.+.
T Consensus 702 ~HKtf~~P~G~GGP~vG~iav~~~L----~pfLp~~P~~d~~G~--~~r---~ga~------------------------ 748 (954)
T PRK12566 702 LHKTFCIPHGGGGPGMGPIGVRAHL----APFVANHPVVPVEGP--DPN---NGAV------------------------ 748 (954)
T ss_pred CCcccCcCccCCCCccchhhhhhhh----hhhccCCCCcCCCCC--CCC---CCce------------------------
Confidence 9999999999999888662211111 11221100 000000 000 0000
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcccccc-chhhHHHHHHHHHhcCccHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGR-KVDAFKLWLMWKARGNLGFRHF 319 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~ 319 (448)
...|.. -......+..++.+|.+ +.+.
T Consensus 749 ---------------------------------------------------S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~a 776 (954)
T PRK12566 749 ---------------------------------------------------SAAPWGSASILPISWMYIAMMGPQ-LADA 776 (954)
T ss_pred ---------------------------------------------------eecccchHHHHHHHHHHHHHHCHH-HHHH
Confidence 000111 11133444555666666 6666
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEeccC---CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee
Q psy14299 320 VDNAVDCSRYFLSQISQRPGFRLVIPE---FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ 396 (448)
Q Consensus 320 ~~~~~~l~~~~~~~L~~~pg~~l~~~~---~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~ 396 (448)
......+++|+.++|.+. +++...+ +.+..+.+...+ ++.. .+.-..++.++|.+.| ++....
T Consensus 777 a~~ailnAnYla~rL~~~--~~v~~~~~~~~~~hEfii~~~~--l~~~---------~g~~~~dvakRL~d~G-ihapt~ 842 (954)
T PRK12566 777 SEVAILSANYLANQLGGA--FPVLYRGRNERVAHECILDLRP--LKAQ---------TGISEEDVAKRLMDYG-FHAPTM 842 (954)
T ss_pred HHHHHHHHHHHHHHhHhh--CCCCcCCCCCCeeeEEEEEccc--cccc---------cCCCHHHHHHHHHHCC-cEEeEE
Confidence 777789999999999874 4443122 223444444331 1100 0001246889999888 443333
Q ss_pred ecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHHh
Q psy14299 397 PLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDLE 439 (448)
Q Consensus 397 ~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~~ 439 (448)
.+... +++|+++ +.+++++|+|+|+++|+++.++....
T Consensus 843 ~fPv~---~~LmIep--TE~eskeEIDrf~eAL~~I~~e~~~v 880 (954)
T PRK12566 843 SFPVP---GTLMVEP--TESESKAELDRFVEAMLSIRAEIGKV 880 (954)
T ss_pred eeccC---CEEEEEe--eeeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 33333 7899999 79999999999999999999886543
No 59
>PRK07179 hypothetical protein; Provisional
Probab=99.89 E-value=3.8e-21 Score=197.65 Aligned_cols=280 Identities=13% Similarity=0.124 Sum_probs=187.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+||++||..++.+... +++.|+++..+|.++...++..|. ++..++. .|+++|
T Consensus 116 ~~~~~~sG~~An~~~l~~l~~--------------~g~~v~~~~~~h~s~~~~~~~~g~---~~~~~~~-----~d~~~l 173 (407)
T PRK07179 116 SCLLCQSGWAANVGLLQTIAD--------------PNTPVYIDFFAHMSLWEGVRAAGA---QAHPFRH-----NDVDHL 173 (407)
T ss_pred cEEEECCHHHHHHHHHHHhCC--------------CCCEEEEECCcCHHHHHHHHHCCC---eEEEecC-----CCHHHH
Confidence 468999999999888876543 456788899999999999888877 5555543 499999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchh-hhhcCC-CCccEEEEC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYS-FVLKGI-NRANSVSWN 161 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~-~~~~~~-~~aD~~~~s 161 (448)
++++++. .+++|++.++++++|.+.|+++|.++|++||+++|+|++|+.+........ ....++ ..+|+++.|
T Consensus 174 ~~~l~~~-----~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S 248 (407)
T PRK07179 174 RRQIERH-----GPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITAS 248 (407)
T ss_pred HHHHHhc-----CCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEee
Confidence 9999651 367888999999999999999999999999999999999987654211100 001122 246999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+||+++++ .|++++++ ++.........++.+... .. ..
T Consensus 249 ~sK~~g~~--~G~l~~~~-~~~~~~~~~~~~~~~~~t-----------------~~--~~-------------------- 286 (407)
T PRK07179 249 LAKAFAGR--AGIITCPR-ELAEYVPFVSYPAIFSST-----------------LL--PH-------------------- 286 (407)
T ss_pred chHhhhcc--CeEEEeCH-HHHHHHHHhCcCeeeCCC-----------------CC--HH--------------------
Confidence 99999854 77777754 332322111111111000 00 00
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
.+.++..+++.+.. .+++.+
T Consensus 287 ----------------------------------------------------------~~aa~~aal~~~~~--~~~~~~ 306 (407)
T PRK07179 287 ----------------------------------------------------------EIAGLEATLEVIES--ADDRRA 306 (407)
T ss_pred ----------------------------------------------------------HHHHHHHHHHHHhc--CHHHHH
Confidence 00111122232222 245677
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEE---EEeeec
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLM---IGYQPL 398 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~---~~~~~~ 398 (448)
+..++++++++.|+++ |+++. ...+++.+.+.. . .....+.+.|.++|+.. +.+...
T Consensus 307 ~l~~~~~~l~~~L~~~-g~~v~---~~~~i~~l~~~~-~---------------~~~~~~~~~L~~~GI~~~~~~~p~~~ 366 (407)
T PRK07179 307 RLHANARFLREGLSEL-GYNIR---SESQIIALETGS-E---------------RNTEVLRDALEERNVFGAVFCAPATP 366 (407)
T ss_pred HHHHHHHHHHHHHHHc-CCCCC---CCCCEEEEEeCC-H---------------HHHHHHHHHHHHCCceEeeecCCCCC
Confidence 8889999999999998 88765 334555554311 0 01236778898999531 112222
Q ss_pred CCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 399 QHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 399 ~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
.+ .+++||++ +.++|++|+++++++|+++.++.+
T Consensus 367 ~~---~~~lRis~--~~~~t~edi~~~~~~l~~~~~~~~ 400 (407)
T PRK07179 367 KN---RNLIRLSL--NADLTASDLDRVLEVCREARDEVD 400 (407)
T ss_pred CC---CceEEEEE--CCCCCHHHHHHHHHHHHHHHHhhC
Confidence 22 37999999 689999999999999999887654
No 60
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.89 E-value=4e-22 Score=193.26 Aligned_cols=287 Identities=19% Similarity=0.187 Sum_probs=182.9
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
..++|+++||++|.+++.+.++ |+..|++.+.+|....+.....-.+......+...++|.+++++
T Consensus 51 ~a~~Fv~sGT~aN~lal~~~~~--------------~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~ 116 (342)
T COG2008 51 EAALFVPSGTQANQLALAAHCQ--------------PGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPED 116 (342)
T ss_pred ceEEEecCccHHHHHHHHHhcC--------------CCCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHH
Confidence 4689999999999999998885 56789999999999887654332221133344444789999999
Q ss_pred HHHHHHHhhhcCC-CcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 83 LEQTIQTSLAEKK-IPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 83 Le~~l~~~~~~~~-~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
|+..+..+.-.+. .|.+++.+..+ ..|.+.| |++|+++||+||+.||+|||.-++.+.... .....-...+|++
T Consensus 117 v~~~i~~~d~~~~~~~~~~~e~~~t-e~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg-~~~~~~~~~~D~v 194 (342)
T COG2008 117 VEAAIRPDDIHHAPTPLAVLENTAT-EGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALG-VALKTIKSYVDSV 194 (342)
T ss_pred HHHhhcCCCcccCCCceEEEeeccC-CCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC-CCHHHHHhhCCEE
Confidence 9999986321233 44445555544 7898866 566788999999999999997776653321 1111112368999
Q ss_pred EECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 159 SWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 159 ~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
++++.|.++.|.|.-+ +.+.++.+... |... ..+ ++.++.+-+ .+.
T Consensus 195 ~~~~tK~g~~~~gAiv--~gn~~~~~~a~-----~~rK---~~G----------gl~~k~r~l------aA~-------- 240 (342)
T COG2008 195 SFCLTKGGGAPVGAIV--FGNRDFAKRAR-----RWRK---RAG----------GLMRKARFL------AAQ-------- 240 (342)
T ss_pred EEecccCCcceeeeEE--EcCHHHHHHHH-----HHHH---Hhc----------ccHhhhhHH------HHH--------
Confidence 9999999999865444 33444433321 0000 000 000010000 000
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
.+-++...-...
T Consensus 241 --------------------------------------------------------------------~~~~l~~~~~~~ 252 (342)
T COG2008 241 --------------------------------------------------------------------GLYALEDDVWRL 252 (342)
T ss_pred --------------------------------------------------------------------HHHHHhccHHHH
Confidence 000111111233
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeec
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPL 398 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~ 398 (448)
...|..++++++.+.+.+.||+++. .+++.+++.+++.. ...+.|...|+.+...-..
T Consensus 253 ~~~Han~mA~~La~~~~~~~G~~~~-~~~~tN~vf~~l~~---------------------~~i~~l~~~~~~~~~~~~~ 310 (342)
T COG2008 253 AADHANAMAARLAEGLEAKPGVKLA-FPVETNMVFVRLPE---------------------SAIEALRLAGALFYRGVLI 310 (342)
T ss_pred HHHHHHHHHHHHHHhhhhcCCceec-cCCcccEEEEECCh---------------------HHHHHHHhhchhheeeeec
Confidence 4566777799999999998999998 66777777775421 2236677777444332222
Q ss_pred CCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHH
Q psy14299 399 QHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRG 433 (448)
Q Consensus 399 ~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~ 433 (448)
.+. +..+||++ |+.+++||||+++..++++.
T Consensus 311 ~~~--~~~vRfvt--s~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 311 GAH--GEIVRFVT--SWATSEEDVDELVAAIKALL 341 (342)
T ss_pred cCC--CceEEEEe--eccCCHHHHHHHHHHHHHhh
Confidence 221 03799999 99999999999999998764
No 61
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.89 E-value=5e-22 Score=199.74 Aligned_cols=283 Identities=13% Similarity=0.032 Sum_probs=192.4
Q ss_pred cEEEeCc-HHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC----CCCCc
Q psy14299 4 KPFLLPG-GSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN----ERGQM 78 (448)
Q Consensus 4 ~g~~t~g-gT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~----~~g~i 78 (448)
.++|++| ||+++-.++.....+ | .+..++..+...|.. .+.|+..|+ +..++.+ +...+
T Consensus 57 ~v~~~~gsgT~a~ea~~~nl~~~--------~---~~~l~i~~G~fg~r~-~~~a~~~g~----~~~~~~~~~~~~~~~~ 120 (349)
T TIGR01364 57 EVLFLQGGATGQFAAVPLNLLAE--------G---KVADYIVTGAWSKKA-AKEAKKYGV----VNVVASGKEGNYTKIP 120 (349)
T ss_pred eEEEEcCCchHHHHHHHHhcCCC--------C---CeEEEEECCHHHHHH-HHHHHHhCC----cEEEeccccCCCCCCC
Confidence 4788877 888876666544322 1 234556667777766 566676676 3334432 33356
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
|+++++. + +++++|.++|++|+||+..| ++++.++++++||++++++..+++... .|++
T Consensus 121 ~~~~~~~--~------~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~id~~~--------~d~~ 179 (349)
T TIGR01364 121 DPSTWEI--S------EDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRPIDVSK--------FGLI 179 (349)
T ss_pred CHHhcCC--C------CCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCccCCHHH--------ccEE
Confidence 6666552 1 25789999999999999987 777788999999999999999776432 4799
Q ss_pred EECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 159 SWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 159 ~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
++++||+++ |+|.|+++++++.+ ....+..+.|.. + ...
T Consensus 180 ~~ssqK~lg-P~Glg~l~~s~~~~-~~~~~~~~~~~~--------------~-------------------------~~~ 218 (349)
T TIGR01364 180 YAGAQKNIG-PAGLTVVIVRKDLL-GRASRITPSMLN--------------Y-------------------------KIH 218 (349)
T ss_pred EEecccccC-CCceEEEEECHHHH-hhcccCCCCcch--------------H-------------------------HHH
Confidence 999999986 99999999988643 332221111110 0 000
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc-cHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL-GFR 317 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~ 317 (448)
.+ .+.....++...+.++..+++++.++ |++
T Consensus 219 ~~------------------------------------------------~~~~~~Tp~~~~i~al~~al~~l~~~gG~e 250 (349)
T TIGR01364 219 AE------------------------------------------------NDSMYNTPPTFAIYVSGLVFKWLKEQGGVK 250 (349)
T ss_pred Hh------------------------------------------------cCCCCCCCcHHHHHHHHHHHHHHHHcCCHH
Confidence 00 00001123466678888899999999 799
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCC--ce-eeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEE
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEF--QC-TNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIG 394 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~--~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~ 394 (448)
++.+++.++++++++.|+++||+.....++ ++ .+++|.+.... +..++.+.+.++|+ ++.
T Consensus 251 ~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~----------------~~~~~~~~~~~~Gi-~~~ 313 (349)
T TIGR01364 251 AIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEE----------------LEKRFLKEAEERGL-VSL 313 (349)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChh----------------HhHHHHHHHHHCCC-ccc
Confidence 999999999999999999998876551111 33 45666542111 12367778889995 433
Q ss_pred eeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 395 YQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 395 ~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
+... - .+.+|+|+ +.|||+||||+|+++|+++.++
T Consensus 314 ~~~~-~---~g~vRvS~--~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 314 KGHR-S---VGGMRASI--YNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred CCcc-c---cCeeEEEC--cCCCCHHHHHHHHHHHHHHHHh
Confidence 3221 1 26899999 6899999999999999998764
No 62
>PLN02721 threonine aldolase
Probab=99.89 E-value=3e-21 Score=194.10 Aligned_cols=285 Identities=18% Similarity=0.228 Sum_probs=181.1
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHH---HHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLK---AAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~---~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
++++++||++++.++.+.... +++.|++++.+|+++.+ .+...|. +++.+|.++++.+|++
T Consensus 58 ~~~~~~Gs~a~~~~l~~~~~~-------------~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~ 121 (353)
T PLN02721 58 ALFVPSGTMGNLISVLVHCDV-------------RGSEVILGDNSHIHLYENGGISTLGGV---HPRTVKNNEDGTMDLD 121 (353)
T ss_pred eEEecCccHHHHHHHHHHccC-------------CCCeEEEcCccceehhcccchhhhcCc---eeEecCCCcCCCcCHH
Confidence 689999999988777665442 56779999999998877 4566676 7888888888999999
Q ss_pred HHHHHHHHhhhcC-CCcEEEEEecc-CCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCcc
Q psy14299 82 FLEQTIQTSLAEK-KIPLFVNATAG-TTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRAN 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~-~~~~lVv~~~~-~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD 156 (448)
++++.+++....+ +++++|+++.. ++++|...| +++|.++|++||+++|+|+|+..+.......... .....+|
T Consensus 122 ~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~-~~~~~~d 200 (353)
T PLN02721 122 AIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVH-RLVKAAD 200 (353)
T ss_pred HHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHH-HHhhhCC
Confidence 9999997421111 35788888775 455787655 7899999999999999999986543211111110 0112579
Q ss_pred EEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHH
Q psy14299 157 SVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 236 (448)
Q Consensus 157 ~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~ 236 (448)
++++++||++++|.| .+++.++++........ .+.. .+.+... .....+..+++
T Consensus 201 ~~~~s~sK~l~~~~G--~~~~~~~~~~~~~~~~~-~~~~------------------~~~~~~~-----~~~~~~~~~l~ 254 (353)
T PLN02721 201 SVSVCLSKGLGAPVG--SVIVGSKSFIRKAKRLR-KTLG------------------GGMRQVG-----VLAAAALVALQ 254 (353)
T ss_pred EEEEecccccCCcee--eEEecCHHHHHhHHHHH-HhcC------------------CCeehhH-----HHHHHHHHHHH
Confidence 999999999998755 33334544433221100 0000 0000000 00011111111
Q ss_pred HHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccH
Q psy14299 237 HFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 316 (448)
Q Consensus 237 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 316 (448)
.. +
T Consensus 255 ~~-----------------------------------------------------------------------------~ 257 (353)
T PLN02721 255 EN-----------------------------------------------------------------------------V 257 (353)
T ss_pred HH-----------------------------------------------------------------------------H
Confidence 11 1
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEE-eccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEe
Q psy14299 317 RHFVDNAVDCSRYFLSQISQRPGFRL-VIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGY 395 (448)
Q Consensus 317 ~~~~~~~~~l~~~~~~~L~~~pg~~l-~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~ 395 (448)
+ ..++..++++++.+.|++++++++ + .++..+++.+++.+ ... .....+.+.|.++|+. +.+
T Consensus 258 ~-~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~-~~~-------------~~~~~~~~~L~~~gi~-v~~ 320 (353)
T PLN02721 258 P-KLEDDHKKAKLLAEGLNQIKGLRVNV-AAVETNIVYFDITD-GSR-------------ITAEKLCKSLEEHGVL-LMP 320 (353)
T ss_pred H-HHHHHHHHHHHHHHHHHhCCCcEEec-CCccceEEEEEccC-Ccc-------------ccHHHHHHHHHhCCcE-Eec
Confidence 1 123335668899999999988865 4 45556665555421 100 0123788999988844 443
Q ss_pred eecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 396 QPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 396 ~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
. +. +++|+++ +++++++|+++++++|+++..
T Consensus 321 ~---~~---~~lR~~~--~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 321 G---NS---SRIRVVT--HHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred C---CC---ceEEEEe--cCcCCHHHHHHHHHHHHHHhh
Confidence 2 22 6899999 789999999999999998764
No 63
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.89 E-value=5e-22 Score=200.52 Aligned_cols=284 Identities=14% Similarity=0.066 Sum_probs=188.3
Q ss_pred cEEEeCc-HHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCc-CHH
Q psy14299 4 KPFLLPG-GSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQM-ICS 81 (448)
Q Consensus 4 ~g~~t~g-gT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~i-d~e 81 (448)
.++||+| ||+++..++.....+ +.+.++|+++...|.+ .+.++..|+ ++..++.++++.. ++.
T Consensus 64 ~vvf~~gs~T~a~~~~~~~l~~~-----------~~~~~~i~~g~~~~~~-~~~a~~~g~---~~~~~~~~~~g~~~~~~ 128 (355)
T cd00611 64 KVLFLQGGATGQFAAVPLNLLGD-----------KGTADYVVTGAWSAKA-AKEAKRYGG---VVVIVAAKEEGKYTKIP 128 (355)
T ss_pred eEEEEcCCchHHHHHHHHhcCCC-----------CCeEEEEECCHHHHHH-HHHHHhcCC---CcEEEecccccCCCCCC
Confidence 5899988 999976665544221 1256678887777766 445566677 6888887655433 422
Q ss_pred HHH-HHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 82 FLE-QTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 82 ~Le-~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
+++ ..+. +++++|.++|.+|.+|...+ ++++.||++++||++++++..+++... .|+...
T Consensus 129 ~~~~~~~~------~~~~lV~~~h~~t~tG~~~~-----~i~~~~g~~~~VDa~qs~g~~~idv~~--------~~~~~s 189 (355)
T cd00611 129 DVETWDLA------PDAAYVHYCSNETIHGVEFD-----EVPDTGGVPLVADMSSNILSRPIDVSK--------FGVIYA 189 (355)
T ss_pred CHhhcCCC------CCCCEEEEeCCcccccEEcc-----eecccCCCeEEEEccccccCCCCCHHH--------hCEEEe
Confidence 222 3332 35889999999999999732 455569999999999999999877532 245556
Q ss_pred CCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
++||+++ |.|+|+++++++.+ ....+..+.+.. + ....+
T Consensus 190 s~~K~lG-P~G~g~l~~~~~~~-~~~~~~~~~~~~--------------~-------------------------~~~~~ 228 (355)
T cd00611 190 GAQKNLG-PAGVTVVIVRKDLL-GKARKITPSMLN--------------Y-------------------------KTHAD 228 (355)
T ss_pred ecccccC-CCceEEEEECHHHH-hhcccCCCCccc--------------H-------------------------HHHHh
Confidence 6999875 99999999988643 322111111110 0 00000
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc-cHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL-GFRHF 319 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~ 319 (448)
......-++...++++..+++++.++ |++.+
T Consensus 229 ------------------------------------------------~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i 260 (355)
T cd00611 229 ------------------------------------------------NNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAM 260 (355)
T ss_pred ------------------------------------------------cCCCCCCChHHHHHHHHHHHHHHHHcCCHHHH
Confidence 00001223355678888899999999 89999
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEeccC--Cce-eeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee
Q psy14299 320 VDNAVDCSRYFLSQISQRPGFRLVIPE--FQC-TNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ 396 (448)
Q Consensus 320 ~~~~~~l~~~~~~~L~~~pg~~l~~~~--~~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~ 396 (448)
.+|+.++++++++.|+++||+.....+ .+. .+++|++.. . .+..++.+.+.+.|. + .+.
T Consensus 261 ~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~--~--------------~l~~~~~~~~~r~G~-~-~~~ 322 (355)
T cd00611 261 EKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGK--E--------------ELEKEFLKEAEAAGM-I-GLK 322 (355)
T ss_pred HHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCC--h--------------hhhHHHHHHHHHCCC-c-ccC
Confidence 999999999999999999996311011 234 347776421 1 112356678888995 3 333
Q ss_pred ecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHH
Q psy14299 397 PLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRG 433 (448)
Q Consensus 397 ~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~ 433 (448)
.+.. .+.+|+|+ ++|||+||||+|+++|+++.
T Consensus 323 ~~~~---~g~vR~S~--~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 323 GHRS---VGGIRASI--YNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred CCcc---cCeEEEEc--cCCCCHHHHHHHHHHHHHHh
Confidence 2221 26899999 68999999999999999864
No 64
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.88 E-value=7.5e-22 Score=199.33 Aligned_cols=283 Identities=14% Similarity=0.079 Sum_probs=193.5
Q ss_pred cEEEeCcHHHHHHHHHHH-HHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICL-ARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~-a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e 81 (448)
..+|++|++++.+-++.. ...+ | .+..+|..+...|.+ .+.++..|. . ..++.++ .+..+..
T Consensus 68 ~v~~~~gsgt~~~Ea~~~nl~~~--------g---~~~l~i~~G~fg~r~-~~~a~~~g~---~-~~~~~~~~~g~~~~~ 131 (360)
T PRK05355 68 KVLFLQGGASLQFAMVPMNLLGG--------G---KKADYVDTGSWSKKA-IKEAKKYGE---V-NVAASSEDDGFTYIP 131 (360)
T ss_pred EEEEEcCCchHHHHHHHHhcCCC--------C---CeEEEEECCHHHHHH-HHHHHHhCC---c-eEEecccccCCCCCC
Confidence 478888877776665433 2221 1 244567777777766 566676776 3 4555443 5666666
Q ss_pred HHHH-HHHHhhhcCCCcEEEEEeccCCcccccc-CHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 82 FLEQ-TIQTSLAEKKIPLFVNATAGTTVLGAFD-PLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 82 ~Le~-~l~~~~~~~~~~~lVv~~~~~t~tG~~~-~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++ .+++ ++++|.++|.+|+||.+. ||++| +|++++||++++++..+++... .|+++
T Consensus 132 ~~~~~~l~~------~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~~--------~d~~~ 191 (360)
T PRK05355 132 PLDEWQLSD------DAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVSK--------FGLIY 191 (360)
T ss_pred ChhhccCCC------CCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCHHH--------ccEEE
Confidence 6655 5643 478999999999999998 78777 8999999999999998776432 37999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
+++||+++ |+|.|+++++++.+ ....+..+.|+... ...
T Consensus 192 ~ssqK~lg-P~Glg~l~~s~~~l-~~~~~~~~~~~~~~---------------------------------------~~~ 230 (360)
T PRK05355 192 AGAQKNIG-PAGLTIVIVREDLL-GRALPSIPSMLDYK---------------------------------------THA 230 (360)
T ss_pred Eecccccc-CCceEEEEECHHHH-hhcccCCChHHHHH---------------------------------------HHH
Confidence 99999986 99999999988643 33211111111100 000
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc-cHHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL-GFRH 318 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~ 318 (448)
+ .......++...++++..+++++.++ |+++
T Consensus 231 ~------------------------------------------------~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~ 262 (360)
T PRK05355 231 D------------------------------------------------NDSMYNTPPTFAIYLAGLVFKWLKEQGGVAA 262 (360)
T ss_pred h------------------------------------------------cCCccCCCcHHHHHHHHHHHHHHHHccCHHH
Confidence 0 00001234467788888999999999 8999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccC--Cce-eeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEe
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPE--FQC-TNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGY 395 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~--~~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~ 395 (448)
+.+++.++++++++.|++++.+..+ .+ .++ .+++|.+.. .. ...++.+.+.++|++ + +
T Consensus 263 i~~r~~~l~~~l~~~l~~~~~~~~~-~~~~~rs~~v~sf~~~~-~~---------------~~~~~~~~~~~~Gi~-~-~ 323 (360)
T PRK05355 263 MEKRNQEKAALLYDAIDSSDFYRNP-VAPEDRSRMNVPFTLAD-EE---------------LDKKFLAEAKAAGLV-G-L 323 (360)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccC-CChhhcCCcEEEEEcCC-hH---------------HHHHHHHHHHHCCCc-c-c
Confidence 9999999999999999999643443 22 234 457775421 10 113677888889944 4 2
Q ss_pred eecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 396 QPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 396 ~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
..... .+.+|+|+ ++|||+||||+|+++|+++.+.
T Consensus 324 ~~~~~---~g~vRiS~--~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 324 KGHRS---VGGMRASI--YNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred CCCCc---cCcEEEEC--CCCCCHHHHHHHHHHHHHHHHh
Confidence 22221 26899999 6899999999999999998754
No 65
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.88 E-value=2.5e-20 Score=189.24 Aligned_cols=278 Identities=15% Similarity=0.215 Sum_probs=177.2
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLE 84 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le 84 (448)
+++.++|+++|+ ++..+.. .+++.|+++..+|.|+..+++.... ....++ ..|+++|+
T Consensus 74 ~l~~~sG~~a~~-~~~~~~~-------------~~~d~ii~d~~~H~sv~~~~~~~~~---~~~~~~-----~~d~~~l~ 131 (370)
T PRK05937 74 AFIVPSGYMANL-GLCAHLS-------------SVTDYVLWDEQVHISVVYSLSVISG---WHQSFR-----HNDLDHLE 131 (370)
T ss_pred EEEECChHHHHH-HHHHHhC-------------CCCCEEEEEhhhhHHHHHHHHHcCC---ceEEec-----CCCHHHHH
Confidence 467777888886 3333222 1456788899999999999987642 233444 34999999
Q ss_pred HHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhh-hcCCCCccEEEECCc
Q psy14299 85 QTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFV-LKGINRANSVSWNPH 163 (448)
Q Consensus 85 ~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~-~~~~~~aD~~~~s~h 163 (448)
+.|++..+.++.+.+|+++++++++|.+.|+++|.++|+++|+++|||+||+.|.+..+..... ..+....+.+..+++
T Consensus 132 ~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tls 211 (370)
T PRK05937 132 SLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYS 211 (370)
T ss_pred HHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEech
Confidence 9997643222345677889999999999999999999999999999999999887654321100 011122345667788
Q ss_pred cccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhh
Q psy14299 164 KMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAV 243 (448)
Q Consensus 164 K~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~ 243 (448)
|.++ |.|+|+++.++ ..........+|.+... -.
T Consensus 212 K~~g-~~G~~vl~~~~--~~~~~~~~~~~~~~s~~-----------------~~-------------------------- 245 (370)
T PRK05937 212 KALG-SMGAALLSSSE--VKQDLMLNSPPLRYSTG-----------------LP-------------------------- 245 (370)
T ss_pred hhhh-cCceEEEcCHH--HHHHHHHhCCCCeecCC-----------------CC--------------------------
Confidence 9875 67888766533 21111111122221110 00
Q ss_pred hhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHHH
Q psy14299 244 DCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 323 (448)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 323 (448)
.+.+.++..+++.+..+| +.+.++.
T Consensus 246 ------------------------------------------------------~~~~~a~~aal~~l~~~~-~~~~~~l 270 (370)
T PRK05937 246 ------------------------------------------------------PHLLISIQVAYDFLSQEG-ELARKQL 270 (370)
T ss_pred ------------------------------------------------------HHHHHHHHHHHHHHHhCc-HHHHHHH
Confidence 011222333444444555 4566788
Q ss_pred HHHHHHHHHHhhcC-CCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcc
Q psy14299 324 VDCSRYFLSQISQR-PGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRN 402 (448)
Q Consensus 324 ~~l~~~~~~~L~~~-pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~ 402 (448)
.++++++.+.|... ++. ...+.+. +.. ...+.+.|.++| +++........
T Consensus 271 ~~l~~~l~~~l~~~~~~~----------~~~i~~~--~~~---------------~~~~~~~L~~~g-i~v~~~~~~~~- 321 (370)
T PRK05937 271 FRLKEYFAQKFSSAAPGC----------VQPIFLP--GIS---------------EQELYSKLVETG-IRVGVVCFPTG- 321 (370)
T ss_pred HHHHHHHHHhcCCCCCCC----------EEEEEeC--Chh---------------HHHHHHHHHHCC-eeEEeeCCCCC-
Confidence 88999999888653 111 1123221 111 236788888888 55553332222
Q ss_pred cccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHH
Q psy14299 403 LHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDL 438 (448)
Q Consensus 403 ~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~ 438 (448)
+++|+|+ |+++|+||||+++++|+++.+++++
T Consensus 322 --~~iRis~--~~~~t~edid~l~~~L~~~~~~~~~ 353 (370)
T PRK05937 322 --PFLRVNL--HAFNTEDEVDILVSVLATYLEKYQK 353 (370)
T ss_pred --CEEEEEc--CCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 6899999 8999999999999999999887654
No 66
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.87 E-value=1.5e-20 Score=188.84 Aligned_cols=150 Identities=11% Similarity=0.084 Sum_probs=114.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e~ 82 (448)
.+++|+|||+++..++.+.+.. +++.|+++..+|.++..++...|. +++.++.++ ++.+|+++
T Consensus 35 ~~~~~~sgt~al~~~l~~l~~~-------------~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~d~~~ 98 (352)
T cd00616 35 YAVAVSSGTAALHLALRALGIG-------------PGDEVIVPSFTFVATANAILLLGA---TPVFVDIDPDTYNIDPEL 98 (352)
T ss_pred eEEEECCHHHHHHHHHHHcCCC-------------CCCEEEeCCcchHHHHHHHHHcCC---eEEEEecCCCcCCcCHHH
Confidence 4789999999988887765321 567899999999999999998888 788899887 78999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
+++.+++ ++++|++++ ++|...|+++|.++|+++|+++++|++|+.+....... +.. ..|+.++|+
T Consensus 99 l~~~i~~------~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~---~~~--~~d~~~~S~ 164 (352)
T cd00616 99 IEAAITP------RTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRK---VGT--FGDAGAFSF 164 (352)
T ss_pred HHHhcCc------CCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEE---ccc--CcceeEEcC
Confidence 9998843 477888765 58999999999999999999999999999876543210 111 246667664
Q ss_pred --ccccCCCCceEEEEEeccchhh
Q psy14299 163 --HKMLGAPLQCSILLIKEKGLLH 184 (448)
Q Consensus 163 --hK~l~~P~g~G~l~vr~~~~~~ 184 (448)
|||+++|. .|+++.+++++..
T Consensus 165 ~~~K~~~~~~-gg~~~~~~~~~~~ 187 (352)
T cd00616 165 HPTKNLTTGE-GGAVVTNDEELAE 187 (352)
T ss_pred CCCCCCcccC-ceEEEECCHHHHH
Confidence 59995544 3556665544433
No 67
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.87 E-value=2.2e-20 Score=194.51 Aligned_cols=299 Identities=12% Similarity=0.110 Sum_probs=195.5
Q ss_pred eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecC------CCchHHHHHHHHhCCCCC-cEEEEecC-CCCCcC
Q psy14299 8 LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSE------DSHYSMLKAAHWLGIGMD-NVIRVKTN-ERGQMI 79 (448)
Q Consensus 8 t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~------~~H~s~~~~~~~~g~~~~-~v~~v~~~-~~g~id 79 (448)
.++|+.||+.++.+..+ |++.|+..+ ..|.+...++++.+.+.. ++...+++ ++|.+|
T Consensus 106 ~~SG~~AN~av~~aL~~--------------pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD 171 (475)
T PLN03226 106 PLSGSPANFAVYTALLQ--------------PHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLID 171 (475)
T ss_pred cCchHHHHHHHHHHhCC--------------CCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcC
Confidence 38999999988877654 567788744 667776666554444210 11133444 468999
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+++|++++.+ .+|++|++. .+.+|...|+++|.++|+++|++++||+||+.|....+..... +..+|+++
T Consensus 172 ~d~Le~~l~~-----~~pklIv~~--~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p---~~~~Div~ 241 (475)
T PLN03226 172 YDKLEKKAML-----FRPKLIIAG--ASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASP---FEYCDVVT 241 (475)
T ss_pred HHHHHHHHhh-----cCCeEEEEe--cCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCC---CCCCeEEE
Confidence 9999999975 246666553 3458899999999999999999999999999999865543211 23589999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
+++||||++|.| |+++++++ ...........|.. +...+
T Consensus 242 ~t~hK~L~GP~G-g~I~~~~~-~~~~~~~g~~~~~d---------------------------------------~~~~i 280 (475)
T PLN03226 242 TTTHKSLRGPRG-GMIFFRKG-PKPPKGQGEGAVYD---------------------------------------YEDKI 280 (475)
T ss_pred ecCcccccCCCc-eEEEEchh-hcccccCCCccHHH---------------------------------------HHHHh
Confidence 999999999998 77777554 22111000000000 00000
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccc-cchhhHHHHHHHHHhcCccHHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCG-RKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
+. ..+. .++.+ ....+.++.+++++...+|+++
T Consensus 281 ~~-------------------------------------a~~~---------~~~g~p~~~~iaal~aAl~~i~~~~~~~ 314 (475)
T PLN03226 281 NF-------------------------------------AVFP---------GLQGGPHNHTIAALAVALKQAMTPEFKA 314 (475)
T ss_pred cc-------------------------------------ccCC---------ccCCCchHHHHHHHHHHHHHHhCcCHHH
Confidence 00 0000 00111 1334566778899999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeec
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPL 398 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~ 398 (448)
+.++..++++++++.|++. |++++......+++.+.+.|.++.+ .++.+.|.+.|++ +.....
T Consensus 315 ~~~~~~~na~~L~~~L~~~-G~~l~~~~t~~hi~lv~~~~~gi~~---------------~~~~~~L~~~~I~-~nk~~~ 377 (475)
T PLN03226 315 YQKQVKANAAALANRLMSK-GYKLVTGGTDNHLVLWDLRPLGLTG---------------SRVEKVLDLAHIT-LNKNAV 377 (475)
T ss_pred HHHHHHHHHHHHHHHHHhC-CCEEEcCCCCCCEEEEEccCCCCCH---------------HHHHHHHHHCCCE-ECCCCC
Confidence 9999999999999999995 9999832233566666665555442 2566777777743 432211
Q ss_pred CCc---ccccEEEEEe---cCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 399 QHR---NLHNFFRLVT---TCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 399 ~g~---~~~~~lRis~---~~~~~~t~edid~l~~al~~~~~~ 435 (448)
.+. -.+..+|++. + +...+++|++++.+.|.++.+.
T Consensus 378 p~~~~~~~~~giRiGt~~lt-~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 378 PGDSSALVPGGVRIGTPAMT-SRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred CCCcccCCCCCcccCcHHHH-HCCCCHHHHHHHHHHHHHHHHH
Confidence 110 0124688832 2 5678899999999999998873
No 68
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.87 E-value=7.2e-21 Score=192.39 Aligned_cols=288 Identities=15% Similarity=0.043 Sum_probs=185.1
Q ss_pred cEEEeCc-HHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH-HHHHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 4 KPFLLPG-GSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS-MLKAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 4 ~g~~t~g-gT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s-~~~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
.++|++| ||.++..++...... +..++ ..-+|.+ +.+.+....... ++..++.+++..++.+
T Consensus 61 ~v~f~~gs~T~a~~~~~~~l~~~-------------~~l~i--~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~ 124 (361)
T TIGR01366 61 EVILGNGGATAFWDAATFGLIEK-------------KSLHL--SFGEFSSKFAKAVKLAPWLG-EPIIVTADPGSAPEPQ 124 (361)
T ss_pred eEEEECCchhHHHHHHHHhcccc-------------cccEE--ecCHHHHHHHHHHHhhhccC-CceEEecCCCCCCCCc
Confidence 5778655 999977776544221 22223 3344443 333444322111 3666776655544432
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+ .+++++|+++|++|.+|.+.|+++| +|++|++++||++++++..+++.. .+|+++++
T Consensus 125 -----~------~~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~--------~~D~~~~s 182 (361)
T TIGR01366 125 -----A------DPGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIA--------ETDVYYFA 182 (361)
T ss_pred -----c------CCCCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCCCCCHH--------HCCEEEEE
Confidence 1 2368999999999999999999998 589999999999999999877642 26999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCC------cccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATA------ATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 235 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~------~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ 235 (448)
+||++++|+|.++++++++. +....+.. +.|+..
T Consensus 183 ~~K~lg~~~Gl~~~~~s~~~-~~~~~~~~~~~~~~p~~~d~--------------------------------------- 222 (361)
T TIGR01366 183 PQKNFASDGGLWLAIMSPAA-LERIEAIAASGRWVPEFLSL--------------------------------------- 222 (361)
T ss_pred chhhcCCCCceEEEEECHHH-HhhhhcccCCCCCCchhhhH---------------------------------------
Confidence 99999999998888887764 33322100 001100
Q ss_pred HHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc-
Q psy14299 236 RHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL- 314 (448)
Q Consensus 236 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 314 (448)
....+.. .......-..+...+++..+++++.++
T Consensus 223 ~~~~~~~---------------------------------------------~~~~t~~tp~i~~i~~l~~al~~l~~~g 257 (361)
T TIGR01366 223 PTAVDNS---------------------------------------------LKNQTYNTPAIATLALLAEQIDWMNGNG 257 (361)
T ss_pred HHHHhcc---------------------------------------------ccCCCCCCchHHHHHHHHHHHHHHHHcc
Confidence 0000000 000000111244455778899999888
Q ss_pred cHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCC--ceee-EEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcE
Q psy14299 315 GFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEF--QCTN-ICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTL 391 (448)
Q Consensus 315 G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~--~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~ 391 (448)
|++.+.++..++++++++.++++++++++...+ .+.. .++.+ +.+++ ..++.+.|.++|+.
T Consensus 258 g~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~-~~g~~---------------~~~v~~~L~~~gI~ 321 (361)
T TIGR01366 258 GLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDF-VDDID---------------AATVAKILRANGIV 321 (361)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEEC-CCccC---------------HHHHHHHHHHCCCe
Confidence 699999999999999999999997677662112 1222 23333 34433 23688888888855
Q ss_pred EEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 392 MIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 392 ~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
+..+...-+ ...+|+|++ .++|++||++|+++|+++.++
T Consensus 322 i~~~~~~l~---~~~vRis~~--~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 322 DTEPYRKLG---RNQLRVAMF--PAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred eccCccccC---CCcEEEEcC--CCCCHHHHHHHHHHHHHHHhh
Confidence 432211111 368999995 699999999999999998764
No 69
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.87 E-value=7.9e-20 Score=183.33 Aligned_cols=282 Identities=12% Similarity=0.070 Sum_probs=183.6
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLE 84 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le 84 (448)
.+++++||++|..++.++.. +++.|++++..|.++..+++..|. ++..++. +|+++++
T Consensus 64 ~iv~~sg~~a~~~~~~~~~~--------------~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~~~~-----~~~~~le 121 (349)
T cd06454 64 ALVFSSGYAANDGVLSTLAG--------------KGDLIISDSLNHASIIDGIRLSGA---KKRIFKH-----NDMEDLE 121 (349)
T ss_pred EEEeccHHHHHHHHHHHhcC--------------CCCEEEEehhhhHHHHHHHHHcCC---ceEEecC-----CCHHHHH
Confidence 57788899998877765543 567789999999999999988887 6666653 5889999
Q ss_pred HHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchh-hhhc-CCCCccEEEECC
Q psy14299 85 QTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYS-FVLK-GINRANSVSWNP 162 (448)
Q Consensus 85 ~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~-~~~~-~~~~aD~~~~s~ 162 (448)
+.+++.. ...++++|+++++++++|...|+++|+++|+++|+++++|++|+.+........ .... .....|+++.++
T Consensus 122 ~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~ 200 (349)
T cd06454 122 KLLREAR-RPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTL 200 (349)
T ss_pred HHHHHhh-ccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeec
Confidence 9997632 123578888899999999999999999999999999999999987654211100 0011 112578999999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
||+++.+. |+++. ++............+... + ...
T Consensus 201 sK~~~~~g--G~i~~-~~~~~~~~~~~~~~~~~~------------------~-~~~----------------------- 235 (349)
T cd06454 201 GKAFGAVG--GYIAG-SKELIDYLRSYARGFIFS------------------T-SLP----------------------- 235 (349)
T ss_pred hhhhcccC--CEEEC-CHHHHHHHHHhchhhhcc------------------C-CCC-----------------------
Confidence 99998643 55544 344333322111111100 0 000
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 322 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 322 (448)
...+.++..+++.... .+.+.++
T Consensus 236 -------------------------------------------------------~~~~~a~~~~l~~~~~--~~~~~~~ 258 (349)
T cd06454 236 -------------------------------------------------------PAVAAAALAALEVLQG--GPERRER 258 (349)
T ss_pred -------------------------------------------------------HHHHHHHHHHHHHHhc--CHHHHHH
Confidence 0011112223333322 3566788
Q ss_pred HHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecC-Cc
Q psy14299 323 AVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQ-HR 401 (448)
Q Consensus 323 ~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~-g~ 401 (448)
..++++++.+.|+++ |++++ .++......+.. +.+. ...++.+.|.++| +.+.+.... +.
T Consensus 259 ~~~~~~~l~~~l~~~-g~~~~-~~~~~~~~~~~~-~~~~---------------~~~~~~~~L~~~g-I~~~~~~~~~~~ 319 (349)
T cd06454 259 LQENVRYLRRGLKEL-GFPVG-GSPSHIIPPLIG-DDPA---------------KAVAFSDALLERG-IYVQAIRYPTVP 319 (349)
T ss_pred HHHHHHHHHHHHHhc-CCccc-CCCCCcEEEEeC-CChH---------------HHHHHHHHHHhCC-ceEEEecCCccC
Confidence 889999999999987 88876 433333333322 1111 1247888999888 444432211 11
Q ss_pred ccccEEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy14299 402 NLHNFFRLVTTCHPASSRQDMDYAIDQIELR 432 (448)
Q Consensus 402 ~~~~~lRis~~~~~~~t~edid~l~~al~~~ 432 (448)
..++++|+++ +.+++++|+++++++|+++
T Consensus 320 ~~~~~iRi~~--~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 320 RGTARLRISL--SAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred CCCCeEEEEE--eCCCCHHHHHHHHHHHHHh
Confidence 1136999999 6899999999999999875
No 70
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.86 E-value=2.1e-19 Score=184.35 Aligned_cols=287 Identities=13% Similarity=0.184 Sum_probs=187.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..+++++|+++|..++..++.. .+++.|+++...|.++..+++..|. .+..++++ |++++
T Consensus 107 ~~l~~~sG~~an~~ai~~l~~~------------~~~~~v~~~~~~h~s~~~~~~~~g~---~~~~~~~~-----d~~~l 166 (402)
T TIGR01821 107 SALVFTSGYVANDATLATLAKI------------IPGCVIFSDELNHASMIEGIRHSGA---EKFIFRHN-----DVAHL 166 (402)
T ss_pred eEEEECchHHHHHHHHHHhhCC------------CCCCEEEEcchHhHHHHHHHHHcCC---eEEEECCC-----CHHHH
Confidence 4688899999999998776642 1456788888899999999988777 55556543 88999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhh--hhcCC-CCccEEEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF--VLKGI-NRANSVSW 160 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~--~~~~~-~~aD~~~~ 160 (448)
++.++.. ...++++|+++++++++|.+.|+++|.++|++||++++||+||+.|.+. +.... ...++ ...|++..
T Consensus 167 ~~~l~~~--~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g-~~g~g~~~~~~~~~~~div~~ 243 (402)
T TIGR01821 167 EKLLQSV--DPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYG-PRGGGIAERDGLMHRIDIIEG 243 (402)
T ss_pred HHHHHhc--cCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccC-CCCCccchhccCCCCCeEEEE
Confidence 9988642 1125789999999999999999999999999999999999999966531 11010 01111 23688888
Q ss_pred CCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
++.|.++.+. |++.. ++++.........+|.++.. ..+
T Consensus 244 t~sKa~g~~G--G~i~~-~~~~~~~l~~~~~~~~~t~~-------------------~~~-------------------- 281 (402)
T TIGR01821 244 TLAKAFGVVG--GYIAA-SRKLIDAIRSYAPGFIFTTS-------------------LPP-------------------- 281 (402)
T ss_pred echhhhccCC--ceeec-CHHHHHHHHHhCcCceecCc-------------------CCH--------------------
Confidence 9999998755 44444 43333332211122211100 000
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
+.+.++..+++.+..+ +.+.
T Consensus 282 ----------------------------------------------------------~~~aaa~aaL~~~~~~--~~~~ 301 (402)
T TIGR01821 282 ----------------------------------------------------------AIAAGATASIRHLKES--QDLR 301 (402)
T ss_pred ----------------------------------------------------------HHHHHHHHHHHHhhcC--HHHH
Confidence 0111222334433333 4455
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEEEeeecC
Q psy14299 321 DNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMIGYQPLQ 399 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~~~~~~~ 399 (448)
++..++++++.+.|+++ |++++ ++..+++.+.+ +.. ....++.+.|.++ | +++.+..+.
T Consensus 302 ~~~~~~~~~l~~~L~~~-g~~~~--~~~~~i~~i~~-~~~---------------~~a~~~~~~L~~~~G-i~v~~~~~p 361 (402)
T TIGR01821 302 RAHQENVKRLKNLLEAL-GIPVI--PNPSHIVPVII-GDA---------------ALCKKVSDLLLNKHG-IYVQPINYP 361 (402)
T ss_pred HHHHHHHHHHHHHHHHc-CCCcC--CCCCCEEEEEe-CCH---------------HHHHHHHHHHHhcCC-EEEEeECCC
Confidence 56678899999999987 88765 34455555532 100 0124688888754 7 555543221
Q ss_pred Cc-ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 400 HR-NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 400 g~-~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
.. ....++|+++ +.++|++|+++++++|+++.++++
T Consensus 362 ~~~~g~~~lRis~--~~~~t~edi~~~~~~l~~~~~~~~ 398 (402)
T TIGR01821 362 TVPRGTERLRITP--TPAHTDKMIDDLVEALLLVWDRLG 398 (402)
T ss_pred CCCCCCceEEEEe--CCCCCHHHHHHHHHHHHHHHHHcC
Confidence 11 1126899999 789999999999999999987653
No 71
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.86 E-value=5.3e-20 Score=189.10 Aligned_cols=244 Identities=12% Similarity=0.104 Sum_probs=166.5
Q ss_pred cEEEEecC-CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccc
Q psy14299 66 NVIRVKTN-ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEK 144 (448)
Q Consensus 66 ~v~~v~~~-~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~ 144 (448)
.++..+++ +++.+|++++++.+.+ .++.|++++.++. |...|+++|.++|+++|++++||+||+.|.+..+.
T Consensus 194 ~~~~y~vd~~~g~iD~d~l~~~~~~------~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~ 266 (493)
T PRK13580 194 HQRSYGVDPDTGLLDYDEIAALARE------FKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKV 266 (493)
T ss_pred eeEecccCcccCccCHHHHHHHHhh------cCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceecccc
Confidence 34555665 4689999999999976 3557777788887 55779999999999999999999999999986443
Q ss_pred hhhhhcCCCCccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHH
Q psy14299 145 YSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLW 224 (448)
Q Consensus 145 ~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (448)
..........+|++++++||+|++|.| |+++++++ +..... ...+|+++.. ..
T Consensus 267 ~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~~~-l~~~L~-~a~P~i~gg~------------------l~------ 319 (493)
T PRK13580 267 FTGDEDPVPHADIVTTTTHKTLRGPRG-GLVLAKKE-YADAVD-KGCPLVLGGP------------------LP------ 319 (493)
T ss_pred chhhcCCCCCCcEEEeCChhhccCCCe-EEEEecHH-HHHHHh-hCCCcccCCC------------------cc------
Confidence 221112234689999999999998986 77777653 333332 2234443321 00
Q ss_pred HHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHH
Q psy14299 225 LMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKL 304 (448)
Q Consensus 225 ~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (448)
+.+.+.
T Consensus 320 --------------------------------------------------------------------------p~iAA~ 325 (493)
T PRK13580 320 --------------------------------------------------------------------------HVMAAK 325 (493)
T ss_pred --------------------------------------------------------------------------HHHHHH
Confidence 001122
Q ss_pred HHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHH
Q psy14299 305 WLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEK 384 (448)
Q Consensus 305 ~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 384 (448)
.+++.......++++.++..+++++|++.|.+. ||+++......+++.+.+.+.+. ....+.+.
T Consensus 326 avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~ggTdshIV~V~lg~~~~---------------~g~~a~~~ 389 (493)
T PRK13580 326 AVALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTGGTDNHLVLIDVTSFGL---------------TGRQAESA 389 (493)
T ss_pred HHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCCCCCCCEEEEEeCCHHH---------------HHHHHHHH
Confidence 233444444556778889999999999999998 99986223456888776532211 11256678
Q ss_pred HHhCCcEEEE----eeecCCcccccEEEEEecCCCCC----CHHHHHHHHHHHHHHHHHh
Q psy14299 385 LVLGGTLMIG----YQPLQHRNLHNFFRLVTTCHPAS----SRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 385 L~~~g~~~~~----~~~~~g~~~~~~lRis~~~~~~~----t~edid~l~~al~~~~~~~ 436 (448)
|.+.| +++. |....+......||+++ +..| +++|++++++.|.++.+..
T Consensus 390 L~e~G-I~vn~i~~Ptvp~g~~~~srLRIg~--~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 390 LLDAG-IVTNRNSIPSDPNGAWYTSGIRLGT--PALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred HHHCC-eEEccccCCCCCCCCCCCceEEecc--chhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 88999 5554 33333311137899999 5644 6999999999999888754
No 72
>KOG1368|consensus
Probab=99.86 E-value=9e-21 Score=177.67 Aligned_cols=285 Identities=16% Similarity=0.206 Sum_probs=192.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.|+|+++|||+|+++++..+.+ ++..|++++.+|.-..+...+.-+....++++...+||.||++++
T Consensus 73 AgLFv~SGTmgNllaIm~Hc~~-------------rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledI 139 (384)
T KOG1368|consen 73 AGLFVPSGTMGNLLAIMVHCHQ-------------RGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDI 139 (384)
T ss_pred ceeeecccccccHHHHHHHhcC-------------CCceEEeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHH
Confidence 5899999999999999999986 677899999999988876654444444899999999999999999
Q ss_pred HHHHHHhh-h-cCCCcEEEEEeccCCccc-cccCH---HHHHHHHHHcCCEEEEecccccccccc---cchhhhhcCCCC
Q psy14299 84 EQTIQTSL-A-EKKIPLFVNATAGTTVLG-AFDPL---DEIATVCEKYDLWMHVDACWGGSLIFS---EKYSFVLKGINR 154 (448)
Q Consensus 84 e~~l~~~~-~-~~~~~~lVv~~~~~t~tG-~~~~l---~~I~~ia~~~g~~l~VD~A~~~~~~~~---~~~~~~~~~~~~ 154 (448)
|+++.... + ..+.+++|++..-.+.+| .+.|| ++|.++|++||+.+|+|||.-+.+... +..+ .+ +.
T Consensus 140 e~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~-i~---~~ 215 (384)
T KOG1368|consen 140 EAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKK-IC---SA 215 (384)
T ss_pred HHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHH-HH---Hh
Confidence 99998533 2 234577888877666666 66665 556789999999999999877655421 2111 11 24
Q ss_pred ccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHH
Q psy14299 155 ANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 234 (448)
Q Consensus 155 aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g 234 (448)
+|++.++..|.|++|.|+-+ +.++.++.++.. +.. .+-++-|. .
T Consensus 216 fDSVsiCLSKglgAPVGSVi--VG~k~FI~kA~~-----~RK--------------alGGGmRQ-----------s---- 259 (384)
T KOG1368|consen 216 FDSVSICLSKGLGAPVGSVI--VGSKDFIDKARH-----FRK--------------ALGGGMRQ-----------S---- 259 (384)
T ss_pred hhhhhhhhhccCCCCcccEE--EccHHHHHHHHH-----HHH--------------HhcCchhH-----------H----
Confidence 89999999999999986654 556555554321 100 00000010 0
Q ss_pred HHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc
Q psy14299 235 FRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 314 (448)
Q Consensus 235 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (448)
|++.+|.. ++++ +
T Consensus 260 ---------------------------GvLaaaaL------------------------------------val~----~ 272 (384)
T KOG1368|consen 260 ---------------------------GVLAAAAL------------------------------------VALD----E 272 (384)
T ss_pred ---------------------------HHHHHHHH------------------------------------HHhh----c
Confidence 11111110 0111 0
Q ss_pred cHHHHHHHHHHHHHHHHHHhhcCCCeEEeccC-CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEE
Q psy14299 315 GFRHFVDNAVDCSRYFLSQISQRPGFRLVIPE-FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMI 393 (448)
Q Consensus 315 G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~ 393 (448)
-+ ....+.++.++.+.+.+++.+++++- .+ .+.+++...+.-+.++ ..++.+.+.+.|++.+
T Consensus 273 ~~-~~L~~dHk~A~~lAe~~~~~~~i~v~-v~a~etNiv~~~l~q~~~~---------------~~~l~~~~~k~gi~lm 335 (384)
T KOG1368|consen 273 NV-PLLRADHKRAKELAEYINTPEEIRVE-VPAVETNIVNMVLCQARLT---------------AEELCKFLEKNGILLM 335 (384)
T ss_pred ch-HHHHHHHHHHHHHHHHhccccceeee-cchhhcceeeeecccccCC---------------HHHHHHHHHHCCeEEe
Confidence 11 14556677788888888887778774 23 4566666544323332 3478899999996655
Q ss_pred EeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHH-HHHH
Q psy14299 394 GYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIE-LRGA 434 (448)
Q Consensus 394 ~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~-~~~~ 434 (448)
.... ..+|+++ |+..|+++++.+...++ .+..
T Consensus 336 ~~~s-------~r~Rivl--h~Qvt~~~ve~~~~~~~k~~~~ 368 (384)
T KOG1368|consen 336 GGAS-------RRIRIVL--HHQVTDEDVEYVKSVLSKKFLK 368 (384)
T ss_pred eccc-------cceEEEE--EEecCHHHHHHHHHHHHHHHHh
Confidence 4322 4699999 99999999999999995 4433
No 73
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.86 E-value=3e-20 Score=185.70 Aligned_cols=160 Identities=18% Similarity=0.230 Sum_probs=111.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH---HHHhCCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA---AHWLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~---~~~~g~~~~~v~~v~~~~~g~id~ 80 (448)
.+++++|||++|..++.+... +++.|++++..|.++.+. +++.|. +++.++.+. +.+|+
T Consensus 49 ~~~~~~~gt~a~~~~~~~l~~--------------~gd~v~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~-~~~d~ 110 (338)
T cd06502 49 AALFVPSGTAANQLALAAHTQ--------------PGGSVICHETAHIYTDEAGAPEFLSGV---KLLPVPGEN-GKLTP 110 (338)
T ss_pred eEEEecCchHHHHHHHHHhcC--------------CCCeEEEecCcceeeecCCcHHHHcCc---eEEeecCCC-CcCCH
Confidence 578999999998888776543 567788999999887653 455677 788888754 78999
Q ss_pred HHHHHHHHHhhhc-CCCcEEEEEeccCCccc--cccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccE
Q psy14299 81 SFLEQTIQTSLAE-KKIPLFVNATAGTTVLG--AFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 81 e~Le~~l~~~~~~-~~~~~lVv~~~~~t~tG--~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
++|++++++..+. ..++++|++++++++.| ..+++++|.++|++||+++|||+||..+......... ......+|+
T Consensus 111 ~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~-~~~~~~~d~ 189 (338)
T cd06502 111 EDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVAL-KTYKSGVDS 189 (338)
T ss_pred HHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCH-HHHHhcCCE
Confidence 9999999652111 12578999999988633 3467888999999999999999997543221110000 000124789
Q ss_pred EEECCccccCCCCceEEEEEeccchhh
Q psy14299 158 VSWNPHKMLGAPLQCSILLIKEKGLLH 184 (448)
Q Consensus 158 ~~~s~hK~l~~P~g~G~l~vr~~~~~~ 184 (448)
++.++||+++.|.|. +++.+++...
T Consensus 190 ~~~s~sK~~~~~~g~--~~~~~~~~~~ 214 (338)
T cd06502 190 VSFCLSKGGGAPVGA--VVVGNRDFIA 214 (338)
T ss_pred EEEeccccCCCccce--EEECCHHHHH
Confidence 999999999988643 3333444433
No 74
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.85 E-value=5.9e-19 Score=181.59 Aligned_cols=288 Identities=14% Similarity=0.161 Sum_probs=186.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..+++++|+++|..++...... .+++.|+++...|.++..+++..|. ++..++.+ |++++
T Consensus 108 ~~i~~~sG~~a~~~~i~~l~~~------------~~g~~vi~~~~~h~s~~~~~~~~g~---~~~~~~~~-----d~~~l 167 (410)
T PRK13392 108 SALLFTSGYVSNDAALSTLGKL------------LPGCVILSDALNHASMIEGIRRSGA---EKQVFRHN-----DLADL 167 (410)
T ss_pred CEEEECcHHHHHHHHHHHHhcC------------CCCCEEEEehhhhHHHHHHHHHcCC---eEEEEeCC-----CHHHH
Confidence 4678888899988887654321 1456788888899999998888887 56666543 67778
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhh-hhcC-CCCccEEEEC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF-VLKG-INRANSVSWN 161 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~-~~~~-~~~aD~~~~s 161 (448)
++.+++.. ..++++|++++++|++|.+.|+++|.++|++||++++||+||+.+.+....... ...+ ....|+++.+
T Consensus 168 ~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~t 245 (410)
T PRK13392 168 EEQLASVD--PDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGT 245 (410)
T ss_pred HHHHHhcc--CCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEE
Confidence 88776431 236789999999999999999999999999999999999999966542110000 0111 1246888889
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
++|+++.+. |++.. +++..........+|..+.. ...
T Consensus 246 lsK~~g~~G--G~~~~-~~~~~~~l~~~~~~~~~s~~-------------------~~~--------------------- 282 (410)
T PRK13392 246 LAKAFGCLG--GYIAA-SADLIDFVRSFAPGFIFTTA-------------------LPP--------------------- 282 (410)
T ss_pred ChHhhhccc--chhhc-CHHHHHHHHHhCcchhccCc-------------------CCH---------------------
Confidence 999998764 45444 44443332222222221110 000
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
+.+.++..+++.....+ ...+
T Consensus 283 ---------------------------------------------------------~~~~a~~aaL~~~~~~~--~~~~ 303 (410)
T PRK13392 283 ---------------------------------------------------------AVAAGATAAIRHLKTSQ--TERD 303 (410)
T ss_pred ---------------------------------------------------------HHHHHHHHHHHHHhcCH--HHHH
Confidence 01112223333333322 3446
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHH-hCCcEEEEeeecCC
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV-LGGTLMIGYQPLQH 400 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g~~~~~~~~~~g 400 (448)
+..++++++.+.|+++ |+++. ++..+++.+.+ +.. ....++.+.|. ++| +++.+.....
T Consensus 304 ~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~i~~-~~~---------------~~~~~~~~~L~~~~G-I~v~~~~~p~ 363 (410)
T PRK13392 304 AHQDRVAALKAKLNAN-GIPVM--PSPSHIVPVMV-GDP---------------TLCKAISDRLMSEHG-IYIQPINYPT 363 (410)
T ss_pred HHHHHHHHHHHHHHHc-CCCCC--CCCCCEEEEEe-CCH---------------HHHHHHHHHHHHhCC-EEEeeeCCCC
Confidence 6778889999999987 88864 45555554432 100 01247888887 567 5555432211
Q ss_pred c-ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 401 R-NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 401 ~-~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
. ....++|+++ |.++|++|+|+++++|+++.++++
T Consensus 364 ~~~~~~~lRis~--~~~~t~edid~l~~aL~~~~~~~~ 399 (410)
T PRK13392 364 VPRGTERLRITP--TPLHDDEDIDALVAALVAIWDRLE 399 (410)
T ss_pred CCCCCceEEEEE--CCCCCHHHHHHHHHHHHHHHHHcC
Confidence 1 0126899999 789999999999999999987653
No 75
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.85 E-value=4.4e-19 Score=179.53 Aligned_cols=154 Identities=16% Similarity=0.124 Sum_probs=107.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCC--CCCCeEEEecCCCchHH-----HHHHHHhCCCCCcEEEEecCCCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLS--HLPPLCMFTSEDSHYSM-----LKAAHWLGIGMDNVIRVKTNERG 76 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~--~~~~~~Vl~~~~~H~s~-----~~~~~~~g~~~~~v~~v~~~~~g 76 (448)
.+++|+|+|+++.+++.+...+-......+ +. ..+++.|+++. .|+.. ...+.+.|. +++.++. ++
T Consensus 62 ~~~~~~g~t~al~~al~al~~~Gd~~~~~~-~~~s~~~~~eVi~~~-~~~~~~~~~~~~~~~~~g~---~~v~v~~--~~ 134 (363)
T TIGR01437 62 DAVIVSSASAGIAQSVAAVITRGNRYLVEN-LHDSKIEVNEVVLPK-GHNVDYGAPVETMVRLGGG---KVVEAGY--AN 134 (363)
T ss_pred eEEEEcCHHHHHHHHHHHHhcCCCcchhhc-ccccccccceEEEEC-ccchhcCCchHHHHHhcCC---eEEEEcC--CC
Confidence 468999999999999887754300000000 00 01233577765 55543 356667777 6767765 46
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEE-EeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCc
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVN-ATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRA 155 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv-~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~a 155 (448)
.+|++++++++.+ ++++++ ++.+.+++|.+.|+++|+++||+||+++++|+||+... . . .... ++
T Consensus 135 ~~d~~~le~ai~~------~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~---~--~--~~~~-g~ 200 (363)
T TIGR01437 135 ECSAEQLEAAITE------KTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL---Q--K--YYRL-GA 200 (363)
T ss_pred CCCHHHHHHhcCh------hceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch---H--H--HHHc-CC
Confidence 7999999999965 466655 45667789999999999999999999999999998321 1 0 0111 37
Q ss_pred cEEEECCccccCCCCceEEEEEec
Q psy14299 156 NSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 156 D~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
|++++|+||++++|. .|+++.++
T Consensus 201 D~~~~S~~K~l~gp~-~G~l~~~~ 223 (363)
T TIGR01437 201 DLVIYSGAKAIEGPT-SGLVLGKK 223 (363)
T ss_pred CEEEEeCCcccCCCc-eEEEEEcH
Confidence 999999999999998 77776543
No 76
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.85 E-value=1.9e-19 Score=185.39 Aligned_cols=286 Identities=13% Similarity=0.123 Sum_probs=181.5
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH-HHHHHHHhCCCCCcE--EEEecCC-CCCcCHH
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS-MLKAAHWLGIGMDNV--IRVKTNE-RGQMICS 81 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s-~~~~~~~~g~~~~~v--~~v~~~~-~g~id~e 81 (448)
+++++||+||+.++.+... +++.|+++...|.+ +..+++....+. .+ ..++++. ++.+|++
T Consensus 94 v~~~SG~~A~~~~l~al~~--------------~GD~Vl~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~d~~ 158 (416)
T PRK13034 94 VQPHSGSQANGAVYLALLK--------------PGDTILGMSLSHGGHLTHGAKVSLSGK-WYNAVQYGVDRLTGLIDYD 158 (416)
T ss_pred EecCCcHHHHHHHHHHhcC--------------CCCEEEEcCccceeeeecCCcceeccc-eeeeEEcccccccCCcCHH
Confidence 4578999999988877633 67889999999988 444444321110 12 2344432 4679999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
++++.+++. ++++|+++. +.+|...|+++|.++|++||++++||+||+.|....+... ..+..+|+++++
T Consensus 159 ~le~~l~~~-----~~klVi~~~--~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~---~~~~~~Di~~~s 228 (416)
T PRK13034 159 EVEELAKEH-----KPKLIIAGF--SAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHP---NPFPHAHVVTTT 228 (416)
T ss_pred HHHHHHhhc-----CCeEEEECC--CccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCC---CCCCCceEEEEe
Confidence 999998651 467776654 3468888999999999999999999999999887544321 122358999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+||++.+|.| |+++.+++.+...... +.+.. .+.+.....
T Consensus 229 ~~K~l~g~~G-G~v~~~~~~~~~~~~~----~~~~~--------------~~~~~~~~~--------------------- 268 (416)
T PRK13034 229 THKTLRGPRG-GMILTNDEEIAKKINS----AVFPG--------------LQGGPLMHV--------------------- 268 (416)
T ss_pred CcccCCCCCC-eEEEECcHHHHHHHHh----hcCCc--------------ccCCccHHH---------------------
Confidence 9999988887 4444544433222111 11100 000000000
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
..++..++...-..+..++.+
T Consensus 269 -----------------------------------------------------------~aa~~~al~~~~~~~~~~~~~ 289 (416)
T PRK13034 269 -----------------------------------------------------------IAAKAVAFGEALQPEFKTYAK 289 (416)
T ss_pred -----------------------------------------------------------HHHHHHHHHHHhChhHHHHHH
Confidence 001111122211223445678
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccC-CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCC
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPE-FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQH 400 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g 400 (448)
+..++++++++.|.++ |+++. .+ .+.+++.+.+...+.. ...+.+.|.+.| +++......+
T Consensus 290 ~l~~~a~~l~~~L~~~-G~~~~-~~~~~t~i~~v~~~~~~~~---------------~~~~~~~L~~~G-I~v~~~~~p~ 351 (416)
T PRK13034 290 QVIANAQALAEVLKER-GYDLV-SGGTDNHLLLVDLRPKGLS---------------GKDAEQALERAG-ITVNKNTVPG 351 (416)
T ss_pred HHHHHHHHHHHHHHHc-CCEec-cCCCCCcEEEEEcCCCCCC---------------HHHHHHHHHhCC-cEEeccCCCC
Confidence 8999999999999998 99986 32 4567766655332221 125567888888 5554311111
Q ss_pred ----cccccEEEEEecCCC----CCCHHHHHHHHHHHHHHHHH
Q psy14299 401 ----RNLHNFFRLVTTCHP----ASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 401 ----~~~~~~lRis~~~~~----~~t~edid~l~~al~~~~~~ 435 (448)
...+..+|+++ |. .++++|+++++++|+++..+
T Consensus 352 ~~~~p~~~~~lR~~~--~~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 352 DTESPFVTSGIRIGT--PAGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred CCcCCCCCCeeEeCc--HHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 10125799998 66 56699999999999988764
No 77
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.85 E-value=8.9e-19 Score=180.02 Aligned_cols=288 Identities=12% Similarity=0.138 Sum_probs=187.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++.++|+++|..++..++.. .++++|+.+...|.++..+++..+. ++..++.+ |+++|
T Consensus 108 ~~~~~~sG~~an~~ai~~l~~~------------~~~~~i~~~~~~h~s~~~~~~~~~~---~~~~~~~~-----d~~~l 167 (407)
T PRK09064 108 AALVFTSGYVSNDATLSTLAKL------------IPDCVIFSDELNHASMIEGIRRSRC---EKHIFRHN-----DVAHL 167 (407)
T ss_pred cEEEECcHHHHHHHHHHHHhCC------------CCCCEEEEeCcchHHHHHHHHHcCC---cEEEECCC-----CHHHH
Confidence 4578888999999888776542 1556788888899999999988777 56566653 88999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEeccccccccc-ccchhhhhcCC-CCccEEEEC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIF-SEKYSFVLKGI-NRANSVSWN 161 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~-~~~~~~~~~~~-~~aD~~~~s 161 (448)
++.++.. ...++++|+++++.+++|.+.|+++|.++|++||++++||+||+.|.+. ....-....++ ...|+++.+
T Consensus 168 e~~l~~~--~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t 245 (407)
T PRK09064 168 EELLAAA--DPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGT 245 (407)
T ss_pred HHHHHhc--cCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEe
Confidence 9988642 1135789999999999999999999999999999999999999865431 11000011122 235888889
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
++|.++.+. |+++. ++++.........+|.+... .. .
T Consensus 246 ~sKa~g~~G--G~~~~-~~~~~~~l~~~~~~~~~t~~-----------------~~--~--------------------- 282 (407)
T PRK09064 246 LAKAFGVMG--GYIAG-SAALVDAVRSYAPGFIFTTS-----------------LP--P--------------------- 282 (407)
T ss_pred cchhhhccC--ceEec-CHHHHHHHHHhCccccccCc-----------------CC--H---------------------
Confidence 999997653 55544 43433332221122221100 00 0
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
+...++..+++++... +...+
T Consensus 283 ---------------------------------------------------------~~~~aa~~al~~~~~~--~~~~~ 303 (407)
T PRK09064 283 ---------------------------------------------------------AIAAAALASIRHLKES--NEERE 303 (407)
T ss_pred ---------------------------------------------------------HHHHHHHHHHHHHhcC--HHHHH
Confidence 0011122233333333 23456
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEEEeeecCC
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMIGYQPLQH 400 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~~~~~~~g 400 (448)
+..++++++.+.|+++ |++++ ++..+++.+.+. .. ....++.+.|.++ | +++.+.....
T Consensus 304 ~~~~~~~~l~~~L~~~-g~~~~--~~~~~iv~i~~~-~~---------------~~~~~l~~~L~~~~g-i~v~~~~~p~ 363 (407)
T PRK09064 304 RHQERAAKLKAALDAA-GIPVM--PNESHIVPVMVG-DP---------------EKCKKASDMLLEEHG-IYVQPINYPT 363 (407)
T ss_pred HHHHHHHHHHHHHHHc-CCCCC--CCCCCEEEEEeC-CH---------------HHHHHHHHHHHHhCC-EEEeeECCCC
Confidence 7788899999999997 88875 344555555431 00 0124688888754 7 5555432211
Q ss_pred c-ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 401 R-NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 401 ~-~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
. ....++|+++ +.++|++|+++++++|+++.+++.
T Consensus 364 ~~~~~~~lRis~--~~~~t~edi~~l~~~l~~~~~~~~ 399 (407)
T PRK09064 364 VPRGTERLRITP--TPFHTDEMIDHLVEALVEVWARLG 399 (407)
T ss_pred CCCCCceEEEEe--CCCCCHHHHHHHHHHHHHHHHHcC
Confidence 1 1126899999 789999999999999999987654
No 78
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.84 E-value=3.2e-19 Score=178.05 Aligned_cols=159 Identities=16% Similarity=0.128 Sum_probs=119.3
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCH--
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMIC-- 80 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~-- 80 (448)
...++++|+|+++..++..+.. +++.|+++...|.++..+++..|. ++..++.++++..+.
T Consensus 60 ~~~~~~~~~t~a~~~~~~~~~~--------------~g~~vl~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~ 122 (350)
T cd00609 60 EEIVVTNGAQEALSLLLRALLN--------------PGDEVLVPDPTYPGYEAAARLAGA---EVVPVPLDEEGGFLLDL 122 (350)
T ss_pred ceEEEecCcHHHHHHHHHHhCC--------------CCCEEEEcCCCchhHHHHHHHCCC---EEEEEecccccCCccCH
Confidence 3578999999998877766543 456799999999999999999987 799999988887765
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHH---HHHHHcCCEEEEecccccccccccchhh-hhcCCCCcc
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIA---TVCEKYDLWMHVDACWGGSLIFSEKYSF-VLKGINRAN 156 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~---~ia~~~g~~l~VD~A~~~~~~~~~~~~~-~~~~~~~aD 156 (448)
+.+++... .++++|+++++++++|.+.|++++. ++|+++|+++++|+||+++......... ........|
T Consensus 123 ~~~~~~~~------~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~ 196 (350)
T cd00609 123 ELLEAAKT------PKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERV 196 (350)
T ss_pred HHHHhhcC------ccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcE
Confidence 55554432 3688999999999999999866555 8999999999999999876643221100 001122468
Q ss_pred EEEECCccccC-CCCceEEEEEeccchhh
Q psy14299 157 SVSWNPHKMLG-APLQCSILLIKEKGLLH 184 (448)
Q Consensus 157 ~~~~s~hK~l~-~P~g~G~l~vr~~~~~~ 184 (448)
+++.++||+++ .+.+.|+++++++.+..
T Consensus 197 ~~~~s~~K~~~~~g~~~G~i~~~~~~~~~ 225 (350)
T cd00609 197 IVLRSFSKTFGLPGLRIGYLIAPPEELLE 225 (350)
T ss_pred EEEeecccccCCcccceEEEecCHHHHHH
Confidence 99999999998 55678888876644433
No 79
>KOG2862|consensus
Probab=99.84 E-value=5.5e-19 Score=166.71 Aligned_cols=282 Identities=15% Similarity=0.179 Sum_probs=200.9
Q ss_pred CCeEEEecCCCchH--HHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC-H
Q psy14299 39 PPLCMFTSEDSHYS--MLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP-L 115 (448)
Q Consensus 39 ~~~~Vl~~~~~H~s--~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~-l 115 (448)
|++.|++-...-.+ +.+.++.+|+ +|..++.+.++...+|.+++.|.+ .+|++|.++|+.+.||+++| +
T Consensus 91 Pgd~vLv~~~G~wg~ra~D~~~r~ga---~V~~v~~~~G~~~~le~i~~~lsq-----h~p~~vfv~hgdsSTgV~q~~~ 162 (385)
T KOG2862|consen 91 PGDNVLVVSTGTWGQRAADCARRYGA---EVDVVEADIGQAVPLEEITEKLSQ-----HKPKAVFVTHGDSSTGVLQDLL 162 (385)
T ss_pred CCCeEEEEEechHHHHHHHHHHhhCc---eeeEEecCcccCccHHHHHHHHHh-----cCCceEEEEecCccccccchHH
Confidence 66666666555544 5577788888 899999999999999999999987 47999999999999999999 6
Q ss_pred HHHHHHHHHcCCEEEEeccccccccc--ccchhhhhcCCCCccEEEECCccccCCCCceEEEEEeccchhhhhccC---C
Q psy14299 116 DEIATVCEKYDLWMHVDACWGGSLIF--SEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANAT---A 190 (448)
Q Consensus 116 ~~I~~ia~~~g~~l~VD~A~~~~~~~--~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~---~ 190 (448)
+.+.++||+|+++++||+..+.|... .|+| ++|+.-..++|.|++|.|.+.+..+++. +...... .
T Consensus 163 ~~~g~lc~k~~~lllVD~VaSlggt~F~mDew--------gVDvaytgSQKaL~aP~GLsiisfS~ka-~~~~~~rK~~~ 233 (385)
T KOG2862|consen 163 AISGELCHKHEALLLVDTVASLGGTEFEMDEW--------GVDVAYTGSQKALGAPAGLSIISFSDKA-LEAIRDRKTKP 233 (385)
T ss_pred HHHHHHhhcCCeEEEEechhhcCCccceehhh--------cccEEEecchhhcCCCCCcceeecCHHH-HHHHhhccCCc
Confidence 77889999999999999977766553 3444 4799999999999999999997776654 3333221 1
Q ss_pred cccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhh
Q psy14299 191 ATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANAT 270 (448)
Q Consensus 191 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (448)
..|+++.-. ++.+ |.-.|..
T Consensus 234 ~~~yFd~~~-------~~~~----------------wgc~~e~------------------------------------- 253 (385)
T KOG2862|consen 234 VSFYFDILR-------LGNF----------------WGCDGEP------------------------------------- 253 (385)
T ss_pred eEEEEeHHh-------hcch----------------hccCCcc-------------------------------------
Confidence 223322110 0000 0000000
Q ss_pred hhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEec--cCCc
Q psy14299 271 AATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVI--PEFQ 348 (448)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~--~~~~ 348 (448)
.....-+++-....+.++|..+-++|++++++++.+++++++..|+++ |++++. .+++
T Consensus 254 -------------------~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~r 313 (385)
T KOG2862|consen 254 -------------------RAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEELR 313 (385)
T ss_pred -------------------cccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccceecChhhc
Confidence 000011123335566678888889999999999999999999999998 988762 2334
Q ss_pred eeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHH
Q psy14299 349 CTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQ 428 (448)
Q Consensus 349 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~a 428 (448)
.+.+.-...|.+++ .+++..++..++.+.+.++- |.-.+.++||+++ ....+.|-|++.++.
T Consensus 314 lptvttv~vp~gvD---------------w~dVv~~~~~~~~vei~ggl--g~~~gKv~RIGl~-gcna~~e~i~~v~~l 375 (385)
T KOG2862|consen 314 LPTVTTVKVPYGVD---------------WKDVVAYAMSHYVVEIGGGL--GPTVGKVFRIGLL-GCNANVEYIDNVVEL 375 (385)
T ss_pred cCcceeeecCCCCC---------------HHHHHHHHHHhcCEEecccc--CCCcccEEEEEEe-eccCCcHHHHHHHHH
Confidence 55555555566664 23788999999766665431 1112369999999 588899999999999
Q ss_pred HHHHHHH
Q psy14299 429 IELRGAE 435 (448)
Q Consensus 429 l~~~~~~ 435 (448)
|+...+.
T Consensus 376 l~~alq~ 382 (385)
T KOG2862|consen 376 LKLALQR 382 (385)
T ss_pred HHHHHhh
Confidence 9877654
No 80
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.84 E-value=2.5e-18 Score=176.78 Aligned_cols=285 Identities=15% Similarity=0.130 Sum_probs=185.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.+++.++|+++|..++...... .++++|+++...|.++..+++..|. ++..++.+ |++++
T Consensus 107 ~~~~~~SG~~An~~ai~~l~~~------------~~g~~I~~~~~~H~s~~~~~~~~g~---~~~~~~~~-----d~~~l 166 (406)
T PRK13393 107 AALLFTSGYVSNWAALSTLGSR------------LPGCVILSDELNHASMIEGIRHSRA---EKRIFRHN-----DPADL 166 (406)
T ss_pred cEEEeCCcHHHHHHHHHHhhcC------------CCCCEEEEccchhHHHHHHHHHcCC---eEEEeCCC-----CHHHH
Confidence 4678888899999998754332 1456788889999999999988776 56667654 88899
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccc-cccchhhhhcCC-CCccEEEEC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLI-FSEKYSFVLKGI-NRANSVSWN 161 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~-~~~~~~~~~~~~-~~aD~~~~s 161 (448)
++.++.. ...++++|+++++++++|.+.|+++|.++|++||++++||++|+.|.+ +....-....++ ...|++..+
T Consensus 167 ~~~l~~~--~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~t 244 (406)
T PRK13393 167 ERKLSDL--DPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGT 244 (406)
T ss_pred HHHHHhc--cCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEe
Confidence 9888642 112578899999999999999999999999999999999999986653 111000001111 235788889
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+.|.++.+. |++.. ++...........+|.++.. ..
T Consensus 245 lsKa~g~~G--G~~~~-~~~~~~~l~~~~~~~~~t~~-----------------~~------------------------ 280 (406)
T PRK13393 245 LAKAFGVMG--GYITG-SAALCDFIRSFASGFIFTTS-----------------LP------------------------ 280 (406)
T ss_pred CchhhcccC--ceeeC-CHHHHHHHHHhCcCceecCc-----------------cC------------------------
Confidence 999998754 44433 43333332221222221100 00
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
.+.+.++..+++.....+. ..+
T Consensus 281 --------------------------------------------------------p~~~aa~~aaL~~~~~~~~--~~~ 302 (406)
T PRK13393 281 --------------------------------------------------------PAVAAGALASVRHLKASSA--ERE 302 (406)
T ss_pred --------------------------------------------------------HHHHHHHHHHHHHHhhCHH--HHH
Confidence 0011122233333333332 234
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEEEeee---
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMIGYQP--- 397 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~~~~~--- 397 (448)
+..++++++++.|+++ |++++ ++..+++.+.+.. . ....++.+.|.++ | +++.+..
T Consensus 303 ~~~~~~~~l~~~L~~~-g~~~~--~~~~~i~~v~~~~-~---------------~~~~~l~~~L~~~~G-i~v~~~~~p~ 362 (406)
T PRK13393 303 RHQDRVARLRARLDKA-GIPHL--PNPSHIVPVMVGD-P---------------VLCKQISDELLDRYG-IYVQPINYPT 362 (406)
T ss_pred HHHHHHHHHHHHHHHc-CCCcC--CCCCCeEEEEeCC-H---------------HHHHHHHHHHHHhCC-EEEEeECCCC
Confidence 5677889999999986 87764 3455555553211 0 0124788888874 8 5555432
Q ss_pred -cCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 398 -LQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 398 -~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
..|. .++|+++ +.++|++|+|+++++|+++.+++.
T Consensus 363 ~p~g~---~~iRis~--~~~~t~edid~l~~~l~~~~~~~~ 398 (406)
T PRK13393 363 VPRGT---ERLRITP--SPLHTDADIEHLVQALSEIWARLG 398 (406)
T ss_pred CCCCC---ceEEEEE--CCCCCHHHHHHHHHHHHHHHHhcC
Confidence 2233 6899999 899999999999999999987654
No 81
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.84 E-value=2.4e-18 Score=175.68 Aligned_cols=287 Identities=16% Similarity=0.148 Sum_probs=184.7
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLE 84 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le 84 (448)
.+++++|++++..++.+... +++.|++++..|+++...++..+. ++..++. .|+++++
T Consensus 105 ~i~~tsG~~a~~~~~~~l~~--------------~gd~vi~~~~~~~~~~~~~~~~~~---~~~~~~~-----~d~~~l~ 162 (397)
T PRK06939 105 AILYSSCFDANGGLFETLLG--------------KEDAIISDALNHASIIDGVRLCKA---KRYRYAN-----NDMADLE 162 (397)
T ss_pred EEEEcChHHHHHHHHHHhCC--------------CCCEEEEEhhhhHHHHHHHHhcCC---ceEEeCC-----CCHHHHH
Confidence 45666668888777655432 677899999999999999998887 5666654 4899999
Q ss_pred HHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccc-hhhhhcCC-CCccEEEECC
Q psy14299 85 QTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEK-YSFVLKGI-NRANSVSWNP 162 (448)
Q Consensus 85 ~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~-~~~~~~~~-~~aD~~~~s~ 162 (448)
+.+++....+.++++|+..+..+++|...|+++|.++|++||+++++|++|+.+....+. ......++ ..+|+++.|+
T Consensus 163 ~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~ 242 (397)
T PRK06939 163 AQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTL 242 (397)
T ss_pred HHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEEC
Confidence 998753333336788888888899999999999999999999999999999755432111 01111122 2468999999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
||+++++. .|+++.++ .+..........+.... + ....
T Consensus 243 sK~~~g~r-~G~v~~~~-~~~~~l~~~~~~~~~~~-----------------~-~~~~---------------------- 280 (397)
T PRK06939 243 GKALGGAS-GGYTAGRK-EVIDWLRQRSRPYLFSN-----------------S-LAPA---------------------- 280 (397)
T ss_pred HHHhCccC-ceEEEeCH-HHHHHHHHhCccccccC-----------------C-CCHH----------------------
Confidence 99997664 57776644 34433321111111100 0 0000
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 322 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 322 (448)
.+.++..+++.... .+++.++
T Consensus 281 ---------------------------------------------------------~~~a~~~al~~~~~--~~~~~~~ 301 (397)
T PRK06939 281 ---------------------------------------------------------IVAASIKVLELLEE--SDELRDR 301 (397)
T ss_pred ---------------------------------------------------------HHHHHHHHHHHHhc--CHHHHHH
Confidence 00111112222211 2456778
Q ss_pred HHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCC-c
Q psy14299 323 AVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQH-R 401 (448)
Q Consensus 323 ~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g-~ 401 (448)
..++++++.+.|+++ ++++. ++..+.+.+.+ +... ...++.+.|.++|+.+. +..+.. .
T Consensus 302 ~~~~~~~l~~~L~~~-~~~~~--~~~~~~~~~~~-~~~~---------------~~~~~~~~L~~~gI~v~-~~~~~~~~ 361 (397)
T PRK06939 302 LWENARYFREGMTAA-GFTLG--PGEHPIIPVML-GDAK---------------LAQEFADRLLEEGVYVI-GFSFPVVP 361 (397)
T ss_pred HHHHHHHHHHHHHHc-CCCcC--CCCCCEEEEEE-CCHH---------------HHHHHHHHHHHCCceEe-eeCCCCCC
Confidence 888999999999987 77764 33344443322 1111 12478899999985444 332211 1
Q ss_pred ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 402 NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 402 ~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
...+++|+++ +.+++++|++++++.|+++.++.
T Consensus 362 ~~~~~iRi~~--~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 362 KGQARIRTQM--SAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred CCCceEEEEE--CCCCCHHHHHHHHHHHHHHHHHh
Confidence 1236899999 67899999999999999987654
No 82
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.83 E-value=2.6e-18 Score=174.61 Aligned_cols=280 Identities=15% Similarity=0.148 Sum_probs=179.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..+++++|+++++.++....+ +++.|++++..|.++..++.+.|. +++.++.. |++++
T Consensus 101 ~~i~~~~g~~~~~~~l~~~~~--------------~gd~V~~~~~~~~~~~~~~~~~g~---~~~~~~~~-----d~~~l 158 (385)
T PRK05958 101 RALLFSSGYAANLAVLTALAG--------------KGDLIVSDKLNHASLIDGARLSRA---RVRRYPHN-----DVDAL 158 (385)
T ss_pred cEEEECcHHHHHHHHHHHhCC--------------CCCEEEEeCccCHHHHHHHHhcCC---ceEEeCCC-----CHHHH
Confidence 467888899988776644322 667899999999999999988887 67777653 89999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEeccccccccccc-chhhhhcCC--CCccEEEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSE-KYSFVLKGI--NRANSVSW 160 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~-~~~~~~~~~--~~aD~~~~ 160 (448)
++.+++. ...+.++++.++.+++|...|+++|.++|++||+++++|++|+.+.+... .......++ ..-++++.
T Consensus 159 ~~~i~~~---~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~ 235 (385)
T PRK05958 159 EALLAKW---RAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVG 235 (385)
T ss_pred HHHHHhc---cCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEE
Confidence 9988652 11356777778889999999999999999999999999999976654211 100000111 12347788
Q ss_pred CCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
++||+++.+ | |+++. ++++..........+..... .. .
T Consensus 236 s~sK~~~~~-G-g~~~~-~~~~~~~~~~~~~~~~~~~~-----------------~~--~-------------------- 273 (385)
T PRK05958 236 TLGKALGSS-G-AAVLG-SETLIDYLINRARPFIFTTA-----------------LP--P-------------------- 273 (385)
T ss_pred echhhcccC-C-cEEEc-CHHHHHHHHHhCccceecCC-----------------CC--H--------------------
Confidence 999999753 4 55544 43333222111111111000 00 0
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
..+.++..+++..... +++.
T Consensus 274 ----------------------------------------------------------~~~aa~~aal~~~~~~--~~~~ 293 (385)
T PRK05958 274 ----------------------------------------------------------AQAAAARAALRILRRE--PERR 293 (385)
T ss_pred ----------------------------------------------------------HHHHHHHHHHHHHhcC--HHHH
Confidence 0011122233333222 5567
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee-ecC
Q psy14299 321 DNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ-PLQ 399 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~-~~~ 399 (448)
++..++++++.+.|+++ +++++ ++..+++.|.+ +... ...++.+.|.++|+. +.+. ...
T Consensus 294 ~~~~~~~~~l~~~L~~~-~~~~~--~~~~~~~~~~~-~~~~---------------~~~~~~~~l~~~gI~-v~~~~~~~ 353 (385)
T PRK05958 294 ERLAALIARLRAGLRAL-GFQLM--DSQSAIQPLIV-GDNE---------------RALALAAALQEQGFW-VGAIRPPT 353 (385)
T ss_pred HHHHHHHHHHHHHHHHc-CCCcC--CCCCCEEEEEe-CCHH---------------HHHHHHHHHHHCCce-EecccCCC
Confidence 88888999999999987 77764 45556666643 1110 124788999999844 4432 111
Q ss_pred CcccccEEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy14299 400 HRNLHNFFRLVTTCHPASSRQDMDYAIDQIELR 432 (448)
Q Consensus 400 g~~~~~~lRis~~~~~~~t~edid~l~~al~~~ 432 (448)
....++++|+++ +.+++++|++++++.|+++
T Consensus 354 ~~~~~~~lRis~--~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 354 VPAGTSRLRITL--TAAHTEADIDRLLEALAEA 384 (385)
T ss_pred CCCCCceEEEEe--cCCCCHHHHHHHHHHHHhc
Confidence 111126899999 7899999999999999865
No 83
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.83 E-value=1.9e-18 Score=160.19 Aligned_cols=299 Identities=14% Similarity=0.142 Sum_probs=206.2
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC--CCCCcCHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN--ERGQMICSF 82 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~--~~g~id~e~ 82 (448)
+-+|+|+-++-+.+|.+.+. +++.|+++.++||+..-++...|+ ++..||.. +...++++.
T Consensus 79 ~R~t~GARe~KfavMhal~~--------------~gd~vV~D~~aHYttyvAAEragl---~v~eVp~tg~Pey~i~~e~ 141 (382)
T COG1103 79 VRVTAGAREAKFAVMHALCK--------------EGDWVVVDSLAHYTTYVAAERAGL---NVAEVPNTGYPEYKITPEG 141 (382)
T ss_pred eeecccchhhHHHHHHHhcc--------------CCCEEEEcCcchHHHHHHHHhcCC---eEEecCCCCCCceEecHHH
Confidence 45789999999999888776 567889999999999999999999 89999954 356899999
Q ss_pred HHHHHHHhhhcC-CCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 83 LEQTIQTSLAEK-KIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 83 Le~~l~~~~~~~-~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
..+.|++-.+++ ..|.+.+++|+....|.+.|.+.++++||++|+++++.+|+..|-++..... + .+|+++.|
T Consensus 142 y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke-----~-g~DFiVgS 215 (382)
T COG1103 142 YAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKE-----I-GADFIVGS 215 (382)
T ss_pred HHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccc-----c-CCCEEEec
Confidence 999999876664 6688999999999999999999999999999999999999999998765422 2 58999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+||.+.+-..+|+|.++. ++....+..+..+...... .-+-++.+..++... + ..-.-..++++
T Consensus 216 GHKsmAAs~PiGvl~~~e-E~ae~V~r~Sg~~~~~KEv----------ellGCT~rGapivTl--m--ASfP~V~eRVk- 279 (382)
T COG1103 216 GHKSMAASAPIGVLAMSE-EWAEIVLRRSGRAFPKKEV----------ELLGCTVRGAPIVTL--M--ASFPHVVERVK- 279 (382)
T ss_pred CccchhccCCeeEEeehh-HHHHHHHhhccccccccee----------eeecccccCchHHHH--H--hcCHHHHHHHH-
Confidence 999999999999999866 4544444333222211110 011233332222111 1 11111222221
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
.++
T Consensus 280 -----------------------------------------------------------------------------rWd 282 (382)
T COG1103 280 -----------------------------------------------------------------------------RWD 282 (382)
T ss_pred -----------------------------------------------------------------------------HHH
Confidence 234
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCCce-eeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCC
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEFQC-TNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQH 400 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g 400 (448)
...+.+++|.+.|.++-|+..++..|.. -.+-|.. | .+. ++.+...+-.--+++.|.++|+.-+.++.
T Consensus 283 eEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fet-p-~f~------eIakk~~r~gyFlY~ELK~RgI~GI~~G~--- 351 (382)
T COG1103 283 EEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFET-P-VFH------EIAKKHKRKGYFLYEELKKRGIHGIQPGQ--- 351 (382)
T ss_pred HHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecC-c-hHH------HHHHhCcCCceeeHHHHHhcCccccccCc---
Confidence 5677899999999999778887433433 3333421 1 111 00000000001255666666643333321
Q ss_pred cccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 401 RNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 401 ~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
..++.+|+ +..+.|++++.++++++++++.
T Consensus 352 ---Tk~~K~sv---yGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 352 ---TKYFKLSV---YGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred ---eeEEEEEe---ecCCHHHHHHHHHHHHHHHHhc
Confidence 25789998 5789999999999999998764
No 84
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.83 E-value=5.5e-19 Score=181.16 Aligned_cols=285 Identities=16% Similarity=0.136 Sum_probs=174.8
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH-----HHHhCCCCCcEEEEecCC---CCC
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA-----AHWLGIGMDNVIRVKTNE---RGQ 77 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~-----~~~~g~~~~~v~~v~~~~---~g~ 77 (448)
++++|||+++..++.+..+ +++.|+++..+|.+.... ++..|. ++..++.+. ++.
T Consensus 85 v~~~sgt~a~~~~l~~l~~--------------~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~ 147 (402)
T cd00378 85 VQPHSGSQANLAVYFALLE--------------PGDTIMGLDLSHGGHLTHGSFTKVSASGK---LFESVPYGVDPETGL 147 (402)
T ss_pred eecCCcHHHHHHHHHHhcC--------------CCCEEEEecCccCccccccccccccccce---eEEEecCCcCcccCC
Confidence 4555789998888776543 567788888888655333 444454 455555533 589
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccE
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
+|++++++.+.+ .++++|+++++. +|...|+++|+++|++||+++++|++|..+..........+. .+|+
T Consensus 148 id~~~l~~~i~~-----~~~~~v~~~~~~--~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~---~~dv 217 (402)
T cd00378 148 IDYDALEKMALE-----FKPKLIVAGASA--YPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP---GADV 217 (402)
T ss_pred cCHHHHHHHHHh-----CCCCEEEecCcc--cCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc---CCcE
Confidence 999999999964 247788776664 467889999999999999999999998766543221111111 4699
Q ss_pred EEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 158 VSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 158 ~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
++.++||++.+|.|.+++ ..++...........++... +... .
T Consensus 218 ~~~s~sK~l~G~~gg~i~-~~~~~~~~~l~~~~~~~~~~------------------~~~~---~--------------- 260 (402)
T cd00378 218 VTTTTHKTLRGPRGGLIL-TRKGELAKKINSAVFPGLQG------------------GPHL---H--------------- 260 (402)
T ss_pred EEeccccCCCCCCceEEE-eccHHHHHHHHHHhCccccC------------------CchH---H---------------
Confidence 999999999888765544 44423333322111111100 0000 0
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
.+.++..++......+++
T Consensus 261 --------------------------------------------------------------~~~a~~~al~~~~~~~~~ 278 (402)
T cd00378 261 --------------------------------------------------------------VIAAKAVALKEALEPEFK 278 (402)
T ss_pred --------------------------------------------------------------HHHHHHHHHHHHhhHHHH
Confidence 001111122222222456
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCC-ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEF-QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ 396 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~ 396 (448)
++.++..++++++.+.|+++ |++++ ..+ ..+.+.+.+.+.+.. ...+.+.|.++| +.+.+.
T Consensus 279 ~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~v~v~~~~~~~~---------------~~~~~~~l~~~g-I~v~~~ 340 (402)
T cd00378 279 AYAKQVVENAKALAEALKER-GFKVV-SGGTDNHLVLVDLRPKGIT---------------GKAAEDALEEAG-ITVNKN 340 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCeEe-ecCCCCeEEEEeCCccCCC---------------HHHHHHHHHHcC-cEEcCC
Confidence 67788889999999999998 99886 433 334443433221211 125666677778 444322
Q ss_pred ----ecCCcccccEEEEEecCCCC----CCHHHHHHHHHHHHHHHHHh
Q psy14299 397 ----PLQHRNLHNFFRLVTTCHPA----SSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 397 ----~~~g~~~~~~lRis~~~~~~----~t~edid~l~~al~~~~~~~ 436 (448)
...+...+.++|+++ +.. .+++|++++++.|+++.++-
T Consensus 341 ~~p~~~~~~~~~~~lRi~~--~~~~~~~~~~~di~~~~~~l~~~~~~~ 386 (402)
T cd00378 341 TLPWDPSSPFVPSGIRIGT--PAMTTRGMGEEEMEEIADFIARALKDA 386 (402)
T ss_pred cCCCCCCCCCCCCeeEecC--HHHHHhCCCHHHHHHHHHHHHHHHhcc
Confidence 111111236899999 444 37999999999999977543
No 85
>PLN02483 serine palmitoyltransferase
Probab=99.83 E-value=3.8e-18 Score=178.94 Aligned_cols=290 Identities=16% Similarity=0.141 Sum_probs=185.4
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLE 84 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le 84 (448)
.++.++|+.+|+.++.+... +++.|++++.+|.|+..+++..|+ +++.++++ |+++++
T Consensus 164 ai~~~~G~~an~~~i~al~~--------------~Gd~Vi~d~~~h~s~~~~~~~~Ga---~v~~~~~~-----d~~~le 221 (489)
T PLN02483 164 AIVFGMGYATNSTIIPALIG--------------KGGLIISDSLNHNSIVNGARGSGA---TIRVFQHN-----TPSHLE 221 (489)
T ss_pred EEEECCHHHHHHHHHHHhCC--------------CCCEEEEcchhhHHHHHHHHHcCC---eEEEEeCC-----CHHHHH
Confidence 46667788888866655433 677899999999999999999998 78888876 788888
Q ss_pred HHHHHhhhcC------CCcE-EEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccch-hhhhcCC--CC
Q psy14299 85 QTIQTSLAEK------KIPL-FVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKY-SFVLKGI--NR 154 (448)
Q Consensus 85 ~~l~~~~~~~------~~~~-lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~-~~~~~~~--~~ 154 (448)
+.+++....+ +..+ +|++....+++|.+.|+++|.++|++||+++++|+||+.+....... .....++ ..
T Consensus 222 ~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~ 301 (489)
T PLN02483 222 EVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPAD 301 (489)
T ss_pred HHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCccc
Confidence 8886532111 1124 55666677889999999999999999999999999998665421100 0001111 24
Q ss_pred ccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHH
Q psy14299 155 ANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 234 (448)
Q Consensus 155 aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g 234 (448)
+|+++.+++|+++.+ | |+++. +++++.........+.+... .. +.
T Consensus 302 ~dI~~~SfSKs~g~~-G-G~i~~-~~~li~~l~~~~~~~~~~~~-----------------~~--p~------------- 346 (489)
T PLN02483 302 VDIMMGTFTKSFGSC-G-GYIAG-SKELIQYLKRTCPAHLYATS-----------------MS--PP------------- 346 (489)
T ss_pred CcEEEEecchhcccC-c-eEEEc-CHHHHHHHHHhCccccccCC-----------------cC--HH-------------
Confidence 789999999999764 3 66554 44444443222221111100 00 00
Q ss_pred HHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhc-C
Q psy14299 235 FRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARG-N 313 (448)
Q Consensus 235 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 313 (448)
...++..+++.+. .
T Consensus 347 -----------------------------------------------------------------~~~~~~aaL~~l~~~ 361 (489)
T PLN02483 347 -----------------------------------------------------------------AVQQVISAIKVILGE 361 (489)
T ss_pred -----------------------------------------------------------------HHHHHHHHHHHHHhC
Confidence 0001111222211 1
Q ss_pred ---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCc
Q psy14299 314 ---LGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGT 390 (448)
Q Consensus 314 ---~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~ 390 (448)
+-.+++.++..++++++++.|+++ |++++ .+...+++.+.+... . ...++.+.|+++|+
T Consensus 362 ~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~-~~~~sp~~~l~l~~~-~---------------~~~~~~~~Ll~~GI 423 (489)
T PLN02483 362 DGTNRGAQKLAQIRENSNFFRSELQKM-GFEVL-GDNDSPVMPIMLYNP-A---------------KIPAFSRECLKQNV 423 (489)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCCCCEEEEEECCH-H---------------HHHHHHHHHHHCCc
Confidence 122345677889999999999998 88876 444445554433210 0 11268888899995
Q ss_pred EEEEeeecCC-cccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 391 LMIGYQPLQH-RNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 391 ~~~~~~~~~g-~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
.+. +..+.. ....+.+|+++ +..+|+||+++++++|+++.+.+.
T Consensus 424 ~v~-~~~fp~~p~~~~~vRi~i--sa~~t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 424 AVV-VVGFPATPLLLARARICI--SASHSREDLIKALEVISEVGDLVG 468 (489)
T ss_pred EEe-eeCCCCCCCCCceEEEEe--CCCCCHHHHHHHHHHHHHHHHHhC
Confidence 554 332211 11126899999 678999999999999999987664
No 86
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=2.5e-18 Score=175.36 Aligned_cols=289 Identities=11% Similarity=0.069 Sum_probs=206.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC---CCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN---ERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~---~~g~id~ 80 (448)
.++.|+|+++++..++.+..+ |++.|++++..+.++....++.|. ++..++++ .++.+|+
T Consensus 91 eiivt~Ga~~al~~~~~a~~~--------------pGDeVlip~P~Y~~y~~~~~~~gg---~~v~v~l~~~~~~f~~d~ 153 (393)
T COG0436 91 EIIVTAGAKEALFLAFLALLN--------------PGDEVLIPDPGYPSYEAAVKLAGG---KPVPVPLDEEENGFKPDL 153 (393)
T ss_pred eEEEeCCHHHHHHHHHHHhcC--------------CCCEEEEeCCCCcCHHHHHHhcCC---EEEEEeCCcCccCCcCCH
Confidence 389999999999999888766 677799999999999999999999 78888864 3789999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCC-cc
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINR-AN 156 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~-aD 156 (448)
++|++++.+ ++++|+++.++|+||.+.+ +++|+++|++||++++.|.+|....+....... ...+.. .|
T Consensus 154 ~~l~~~i~~------ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s-~~~~~~~~~ 226 (393)
T COG0436 154 EDLEAAITP------KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPS-ILELAGARD 226 (393)
T ss_pred HHHHhhcCc------cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCC-HhhcCCCcc
Confidence 999999976 5899999999999998855 888999999999999999998866553211110 111111 11
Q ss_pred -EEE-ECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChH
Q psy14299 157 -SVS-WNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 233 (448)
Q Consensus 157 -~~~-~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 233 (448)
.++ -|..|.++.+ .-+|+++..++.+....
T Consensus 227 ~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~----------------------------------------------- 259 (393)
T COG0436 227 RTITINSFSKTYGMTGWRIGWVVGPPEELIAAL----------------------------------------------- 259 (393)
T ss_pred eEEEEecccccccccccceeEeecChHHHHHHH-----------------------------------------------
Confidence 333 3667766543 23444444322221111
Q ss_pred HHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcC
Q psy14299 234 GFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 313 (448)
Q Consensus 234 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (448)
+ .+......|.+.+.+.+...+|+....
T Consensus 260 ------~----------------------------------------------~~~~~~~~~~~~~~Q~aa~~aL~~~~~ 287 (393)
T COG0436 260 ------R----------------------------------------------KLKSYLTSCAPTPAQYAAIAALNGPQS 287 (393)
T ss_pred ------H----------------------------------------------HHHHhcccCCCHHHHHHHHHHhcCccc
Confidence 0 011123346666667777777776543
Q ss_pred -ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEE
Q psy14299 314 -LGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLM 392 (448)
Q Consensus 314 -~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~ 392 (448)
..++.+.+...+.++.+.+.|.+++|+++. .+|..+.+.|.-.+...+ ..++.+.|+++..+.
T Consensus 288 ~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~-~~p~Ga~Y~~~~i~~~~d---------------~~~f~~~Ll~~~gV~ 351 (393)
T COG0436 288 DEVVEEMREEYRERRDLLVEALNEIGGLSVV-KPPEGAFYLFPKIPELLD---------------SEEFAKKLLEEAGVA 351 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCeeec-cCCCeeEEEEeecCCCCC---------------HHHHHHHHHHhCCEE
Confidence 566777788999999999999999889987 557788888754443211 237888888886688
Q ss_pred EEeeecCCcc-cccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 393 IGYQPLQHRN-LHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 393 ~~~~~~~g~~-~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
+.|+...|.. +.+++|+|+. +++++++..++.+++..+.
T Consensus 352 v~PG~~Fg~~~g~~~vRis~~----~~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 352 VVPGSGFGEPPGEGYVRLSLA----TSEETLEEALRRLARFLAE 391 (393)
T ss_pred EecccccCCCCCCCeEEEEEe----cCHHHHHHHHHHHHHHHHh
Confidence 8888777763 5689999995 3557788888777776654
No 87
>PLN02822 serine palmitoyltransferase
Probab=99.82 E-value=1.1e-17 Score=174.97 Aligned_cols=295 Identities=14% Similarity=0.100 Sum_probs=190.0
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLE 84 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le 84 (448)
.+|++|++ ++..++.+..+ +++.|+++...|+++..++++.+. +++.++++ |+++++
T Consensus 173 i~~s~G~~-a~~sai~a~~~--------------~gd~Ii~d~~~H~s~~~~~~ls~~---~~~~~~~n-----d~~~l~ 229 (481)
T PLN02822 173 ILYSYGLS-TIFSVIPAFCK--------------KGDIIVADEGVHWGIQNGLYLSRS---TIVYFKHN-----DMESLR 229 (481)
T ss_pred EEECCHHH-HHHHHHHHhCC--------------CCCEEEEeCCccHHHHHHHHHcCC---eEEEECCC-----CHHHHH
Confidence 45555544 66665554432 567888999999999999998887 78888887 778888
Q ss_pred HHHHHhhhc---CCCc-EEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccc-hhhhhcCC--CCccE
Q psy14299 85 QTIQTSLAE---KKIP-LFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEK-YSFVLKGI--NRANS 157 (448)
Q Consensus 85 ~~l~~~~~~---~~~~-~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~-~~~~~~~~--~~aD~ 157 (448)
+.+++..+. .+++ ++|++....+++|.+.|+++|.++|++||+++++|++|+.+.+--.. .-....++ ...|+
T Consensus 230 ~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~di 309 (481)
T PLN02822 230 NTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDI 309 (481)
T ss_pred HHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeE
Confidence 888653222 1234 68999999999999999999999999999999999999966542110 00001122 24789
Q ss_pred EEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 158 VSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 158 ~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
++.+..|.++.+. |+++. ++.+..........|.++.+ .+ +..
T Consensus 310 i~~s~sKalg~~G--G~i~g-~~~ii~~~~~~~~~~~fsa~-----------------lP--p~~--------------- 352 (481)
T PLN02822 310 ITAAMGHALATEG--GFCTG-SARVVDHQRLSSSGYVFSAS-----------------LP--PYL--------------- 352 (481)
T ss_pred EEecchhhhhhCC--eEEEc-CHHHHHHHHhcCCceeeccc-----------------cC--HHH---------------
Confidence 9999999997543 55554 44444443322233332211 00 000
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
+.+...+++.... .+
T Consensus 353 ---------------------------------------------------------------~~Aa~~aL~~l~~--~~ 367 (481)
T PLN02822 353 ---------------------------------------------------------------ASAAITAIDVLED--NP 367 (481)
T ss_pred ---------------------------------------------------------------HHHHHHHHHHHHh--CH
Confidence 0111122222221 24
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHH-hCCcEEEEee
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV-LGGTLMIGYQ 396 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g~~~~~~~ 396 (448)
++.++..++++++++.|++++|+++. .++..+++.+.+... .... +.-.....++.+.|+ ++| +++.+.
T Consensus 368 ~~~~~l~~~~~~l~~~L~~~~g~~~~-~~~~spi~~l~l~~~-~~~~-------~~~~~~~~~~~~~Ll~e~G-V~v~~~ 437 (481)
T PLN02822 368 SVLAKLKENIALLHKGLSDIPGLSIG-SNTLSPIVFLHLEKS-TGSA-------KEDLSLLEHIADRMLKEDS-VLVVVS 437 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccC-CCCCCCEEEEEeCCC-cccc-------cchHHHHHHHHHHHHhcCC-EEEEee
Confidence 57788889999999999998898875 455666666665321 0000 000112347888988 778 555543
Q ss_pred ec--CCc-ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 397 PL--QHR-NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 397 ~~--~g~-~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
.+ .+. ..+..+|+++ +..+|++||++++++|+++.+++
T Consensus 438 ~~~~~~~~~~~~~lRi~i--s~~~t~edI~~~~~~l~~~~~~~ 478 (481)
T PLN02822 438 KRSTLDKCRLPVGIRLFV--SAGHTESDILKASESLKRVAASV 478 (481)
T ss_pred CCCCcCCCCCCCcEEEEE--CCCCCHHHHHHHHHHHHHHHHHH
Confidence 22 111 0125799999 67899999999999999988765
No 88
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.82 E-value=6.1e-18 Score=173.72 Aligned_cols=291 Identities=12% Similarity=0.078 Sum_probs=190.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCC-CCCCeEEEecCCCchHHHHHHHHhCCC-CCcEEEEecCCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLS-HLPPLCMFTSEDSHYSMLKAAHWLGIG-MDNVIRVKTNERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~-~~~~~~Vl~~~~~H~s~~~~~~~~g~~-~~~v~~v~~~~~g~id~e 81 (448)
..++.++|..+|+.++.+...-. +-..+.+.+ ..+++.|+++...|.|+..++++.... ..++..++++ |++
T Consensus 164 ~all~sSGy~AN~~~i~aL~~~~-~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-----D~~ 237 (476)
T PLN02955 164 DCLVCPTGFAANMAAMVAIGSVA-SLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-----DMY 237 (476)
T ss_pred cEEEECChHHHHHHHHHHHhhcc-ccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-----CHH
Confidence 57899999999998887653110 000000000 025668999999999999999987421 1267788888 999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhh--cCC-CCccEE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVL--KGI-NRANSV 158 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~--~~~-~~aD~~ 158 (448)
+|++.|++.. .+.++|++....++.|.+.|+++|.++|++||++++||.||+.+.+--. ....+ .++ ...|++
T Consensus 238 ~Le~~L~~~~---~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~-G~G~~e~~g~~~di~ii 313 (476)
T PLN02955 238 HLNSLLSSCK---MKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGEN-GGGVAEEFNCEADVDLC 313 (476)
T ss_pred HHHHHHHhCC---CCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCC-CCcHHHHhCCCCCCcEE
Confidence 9999997642 2356888899999999999999999999999999999999998876221 11111 111 357899
Q ss_pred EECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 159 SWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 159 ~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
+.++.|.+++.. |+ ++.++...........+|+++... + . ..
T Consensus 314 ~~TLsKA~G~~G--Gf-i~gs~~~~~~l~~~~~~~ifStal-----------------p--p-~~--------------- 355 (476)
T PLN02955 314 VGTLSKAAGCHG--GF-IACSKKWKQLIQSRGRSFIFSTAI-----------------P--V-PM--------------- 355 (476)
T ss_pred EEeCccchhccC--ce-eecHHHHHHHHHHhCCCCeecccc-----------------c--H-HH---------------
Confidence 999999988653 33 444444555544455566654321 0 0 00
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
+.+...+++....+ +.
T Consensus 356 --------------------------------------------------------------aaa~laal~l~~~~--~~ 371 (476)
T PLN02955 356 --------------------------------------------------------------AAAAYAAVVVARKE--KW 371 (476)
T ss_pred --------------------------------------------------------------HHHHHHHHHHHhcC--HH
Confidence 00001111111111 23
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEE----
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIG---- 394 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~---- 394 (448)
++++..++.++|++. . |+.+ .++++.+.+.. +....++.++|.++|+ ++.
T Consensus 372 ~r~~L~~n~~~fr~~---~-G~~~-----~sPI~pI~ig~----------------~~~a~~~~~~L~~~Gi-~v~~i~y 425 (476)
T PLN02955 372 RRKAIWERVKEFKAL---S-GVDI-----SSPIISLVVGN----------------QEKALKASRYLLKSGF-HVMAIRP 425 (476)
T ss_pred HHHHHHHHHHHHHHh---c-CCCC-----CCCEEEEEeCC----------------HHHHHHHHHHHHHCCC-EEEEECC
Confidence 556777888888874 2 5542 26666665421 1123478899999994 444
Q ss_pred eeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 395 YQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 395 ~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
|.++.+. ..+|+++ +..+|++||++++++|.++.....
T Consensus 426 PtVP~g~---~rLRi~l--sA~Ht~edId~lv~~L~~~~~~~~ 463 (476)
T PLN02955 426 PTVPPNS---CRLRVTL--SAAHTTEDVKKLITALSSCLDFDN 463 (476)
T ss_pred CCCCCCC---ceEEEee--CCCCCHHHHHHHHHHHHHHHhhhc
Confidence 4444554 7899999 789999999999999998876544
No 89
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.82 E-value=1.3e-18 Score=179.39 Aligned_cols=288 Identities=15% Similarity=0.144 Sum_probs=177.2
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH---HHHhCCCCCcEEEEecCC-CCCcCHH
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA---AHWLGIGMDNVIRVKTNE-RGQMICS 81 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~---~~~~g~~~~~v~~v~~~~-~g~id~e 81 (448)
+++++||+++..++.+... +++.|+++..+|.++... ....+.+ .+++.++.++ ++.+|++
T Consensus 91 i~~~sgt~al~~~l~~l~~--------------~gd~Vl~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~d~~ 155 (416)
T PRK00011 91 VQPHSGSQANAAVYFALLK--------------PGDTILGMDLAHGGHLTHGSPVNFSGKL-YNVVSYGVDEETGLIDYD 155 (416)
T ss_pred eecCCchHHHHHHHHHhcC--------------CCCEEEEeccccCCccccccccccccce-eeEeecCcCcccCCcCHH
Confidence 4445688998777765532 677899999998764321 1112211 1566777763 5899999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
++++++++. ++++|+++. +.+|...|+++|.++|++||+++++|+||+.+..........+. .+|+++.|
T Consensus 156 ~l~~~i~~~-----~~k~v~~~~--~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~---~~di~~~S 225 (416)
T PRK00011 156 EVEKLALEH-----KPKLIIAGA--SAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP---HADVVTTT 225 (416)
T ss_pred HHHHHHHhc-----CCCEEEECC--CcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC---CCcEEEec
Confidence 999999651 467777654 34677889999999999999999999999876553221111122 47999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+||++++|.|. +++.+++++..........+... +...
T Consensus 226 ~~K~l~g~~gg-~i~~~~~~~~~~l~~~~~~~~~~------------------~~~~----------------------- 263 (416)
T PRK00011 226 THKTLRGPRGG-LILTNDEELAKKINSAVFPGIQG------------------GPLM----------------------- 263 (416)
T ss_pred CCcCCCCCCce-EEEeCCHHHHHHHHHHhCccccC------------------CccH-----------------------
Confidence 99999887754 44444434433322111111000 0000
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
....++..++.....++++++.+
T Consensus 264 ---------------------------------------------------------~~~aa~~~a~~~~~~~~~~~~~~ 286 (416)
T PRK00011 264 ---------------------------------------------------------HVIAAKAVAFKEALEPEFKEYAQ 286 (416)
T ss_pred ---------------------------------------------------------HHHHHHHHHHHHHHhhhHHHHHH
Confidence 00111112222223456788889
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccC-CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee--ec
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPE-FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ--PL 398 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~--~~ 398 (448)
+..++++++++.|+++ |++++ .. ...+.+.+.+.+.++. ..++.+.|.++|+ .+... +.
T Consensus 287 ~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~i~~~~~~~~---------------~~~~~~~L~~~GI-~v~~~~~p~ 348 (416)
T PRK00011 287 QVVKNAKALAEALAER-GFRVV-SGGTDNHLVLVDLRSKGLT---------------GKEAEAALEEANI-TVNKNAVPF 348 (416)
T ss_pred HHHHHHHHHHHHHHhC-CCeee-ecCCCCeEEEEeCcccCCC---------------HHHHHHHHHHcCc-EEccCcCCC
Confidence 9999999999999997 89876 31 2335445543222211 1367888888884 44311 11
Q ss_pred --CCcccccEEEEEecC--CCCCCHHHHHHHHHHHHHHHHH
Q psy14299 399 --QHRNLHNFFRLVTTC--HPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 399 --~g~~~~~~lRis~~~--~~~~t~edid~l~~al~~~~~~ 435 (448)
.....+..+|++... +...|++|+++++++|+++...
T Consensus 349 ~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 349 DPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred CCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 111113579997621 1245799999999999998665
No 90
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.82 E-value=5.4e-18 Score=173.35 Aligned_cols=152 Identities=13% Similarity=0.049 Sum_probs=116.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC--CCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER--GQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~--g~id~e 81 (448)
..++|+|+|+++.+++.+... +++.|++++.+|.++...+...|. +++.+|.+++ +.+|++
T Consensus 95 ~i~~t~G~~~al~~~~~~l~~--------------~g~~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~ 157 (391)
T PRK08361 95 NVIVTAGAYEATYLAFESLLE--------------EGDEVIIPDPAFVCYVEDAKIAEA---KPIRIPLREENEFQPDPD 157 (391)
T ss_pred cEEEeCChHHHHHHHHHHhcC--------------CCCEEEEcCCCCcccHHHHHHcCC---EEEEEecCCccCCCCCHH
Confidence 478999999998887766543 566788999999999999998888 7889988763 479999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
++++.+++ ++++|++++++|+||...| +++|+++|+++++++++|++++...................+++
T Consensus 158 ~l~~~i~~------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~ 231 (391)
T PRK08361 158 ELLELITK------RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTIL 231 (391)
T ss_pred HHHHhccc------ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEE
Confidence 99998864 4789999999999999999 88999999999999999999875543211111111111124678
Q ss_pred EECCccccCCCCc--eEEEEEec
Q psy14299 159 SWNPHKMLGAPLQ--CSILLIKE 179 (448)
Q Consensus 159 ~~s~hK~l~~P~g--~G~l~vr~ 179 (448)
+.|++|.++.| | +|+++..+
T Consensus 232 ~~s~SK~~~~~-GlRiG~~~~~~ 253 (391)
T PRK08361 232 ANSFSKTFAMT-GWRLGFVIAPE 253 (391)
T ss_pred EecCchhcCCc-HhhhhhhccCH
Confidence 89999988765 5 77777643
No 91
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.81 E-value=1e-17 Score=168.56 Aligned_cols=279 Identities=15% Similarity=0.162 Sum_probs=178.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..+++++|+++++.++.++.. +++.|++++..|.++..+++..|. +++.++. +|+++|
T Consensus 78 ~~i~~~~G~~~~~~~l~~~~~--------------~gd~v~~~~~~~~~~~~~~~~~g~---~~~~~~~-----~d~~~l 135 (360)
T TIGR00858 78 AALLFSSGYLANVGVISALVG--------------KGDLILSDALNHASLIDGCRLSGA---RVRRYRH-----NDVEHL 135 (360)
T ss_pred CEEEECchHHHHHHHHHHhCC--------------CCCEEEEEccccHHHHHHHHhcCC---ceEEecC-----CCHHHH
Confidence 356777788887766554422 567788999999999999998887 6766663 589999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchh-hhhcCC--CCccEEEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYS-FVLKGI--NRANSVSW 160 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~-~~~~~~--~~aD~~~~ 160 (448)
++.+++.. +.++++|++.++.+++|...|+++|.++|+++|+++++|++|+.+.+..+... ....++ ...|+++.
T Consensus 136 ~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 213 (360)
T TIGR00858 136 ERLLEKNR--GERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVG 213 (360)
T ss_pred HHHHHHcc--cCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEE
Confidence 99986521 12467888888899999999999999999999999999999986654221100 001111 14688899
Q ss_pred CCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
+++|+++.+ | |+++. ++++..........+... .+.. .
T Consensus 214 s~sK~~~~~-g-G~~~~-~~~~~~~~~~~~~~~~~~-----------------~~~~--~-------------------- 251 (360)
T TIGR00858 214 TLSKALGSY-G-AYVAG-SQALIDYLINRARTLIFS-----------------TALP--P-------------------- 251 (360)
T ss_pred echhhhhcc-C-cEEEc-CHHHHHHHHHhCccceec-----------------CCCC--H--------------------
Confidence 999999764 3 66554 333333221111111100 0000 0
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
..+.++..+++.... .+++.
T Consensus 252 ----------------------------------------------------------~~~~a~~~al~~~~~--~~~~~ 271 (360)
T TIGR00858 252 ----------------------------------------------------------AVAAAALAALELIQE--EPWRR 271 (360)
T ss_pred ----------------------------------------------------------HHHHHHHHHHHHHhh--CHHHH
Confidence 001111122332221 24567
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCC
Q psy14299 321 DNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQH 400 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g 400 (448)
++..++++++.+.|+++ ++++. ++..+.+.+.+ +... ...++.+.|.++| +.+.+....+
T Consensus 272 ~~~~~~~~~l~~~L~~~-~~~~~--~~~~~~~~~~~-~~~~---------------~~~~~~~~l~~~g-I~v~~~~~~~ 331 (360)
T TIGR00858 272 EKLLALIARLRAGLEAL-GFTLM--PSCTPIVPVII-GDNA---------------SALALAEELQQQG-IFVGAIRPPT 331 (360)
T ss_pred HHHHHHHHHHHHHHHHc-CCccC--CCCCCEEEEEe-CCHH---------------HHHHHHHHHHHCC-eeEeeeCCCC
Confidence 88889999999999997 77764 34445554443 1110 1237889999998 5554322111
Q ss_pred -cccccEEEEEecCCCCCCHHHHHHHHHHHH
Q psy14299 401 -RNLHNFFRLVTTCHPASSRQDMDYAIDQIE 430 (448)
Q Consensus 401 -~~~~~~lRis~~~~~~~t~edid~l~~al~ 430 (448)
...++++|+++ +.+++++|+++++++|+
T Consensus 332 ~~~~~~~iRis~--~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 332 VPAGTSRLRLTL--SAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCCCceEEEEE--cCCCCHHHHHHHHHhhC
Confidence 11126899999 68999999999999874
No 92
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.81 E-value=1.8e-17 Score=168.81 Aligned_cols=284 Identities=14% Similarity=0.126 Sum_probs=179.3
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLE 84 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le 84 (448)
.+++++|+++++.++.+... +++.|+++...|.++..++...|. ++..++ .+|+++++
T Consensus 96 ~i~~~sG~~a~~~a~~~~~~--------------~gd~vi~~~~~~~~~~~~~~~~g~---~~~~~~-----~~d~~~l~ 153 (385)
T TIGR01825 96 ALVFQSGFNTNQGVLSALLR--------------KGDIVLSDELNHASIIDGLRLTKA---TKKIYK-----HADMDDLD 153 (385)
T ss_pred EEEECcHHHHHHHHHHHhCC--------------CCCEEEEEccccHHHHHHHHhcCC---ceEEeC-----CCCHHHHH
Confidence 46667778998877765533 566888999999999888887776 454443 47899999
Q ss_pred HHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchh-hhhcCC-CCccEEEECC
Q psy14299 85 QTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYS-FVLKGI-NRANSVSWNP 162 (448)
Q Consensus 85 ~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~-~~~~~~-~~aD~~~~s~ 162 (448)
+.+.+.. ..++++|++.+..+++|.+.|+++|.++|++||+++++|++|+.+.+...... ....++ ...|+++.++
T Consensus 154 ~~l~~~~--~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 231 (385)
T TIGR01825 154 RVLRENP--SYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTL 231 (385)
T ss_pred HHHHhhc--cCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEec
Confidence 9887532 13578888888899999999999999999999999999999976654211100 000011 2468889999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
+|+++.+. |+++. +++...........|.... . ...
T Consensus 232 sK~~~~~g--G~~~~-~~~~~~~~~~~~~~~~~~~-----------------~--~~~---------------------- 267 (385)
T TIGR01825 232 SKAIGVVG--GYAAG-HKELIEYLKNRARPFLFST-----------------A--QPP---------------------- 267 (385)
T ss_pred cHHhhcCC--CEEec-CHHHHHHHHHhCccccccC-----------------C--CCH----------------------
Confidence 99997654 55544 3333333221111111100 0 000
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 322 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 322 (448)
+.+.++..+++..... ++..++
T Consensus 268 --------------------------------------------------------~~~~a~~~al~~~~~~--~~~~~~ 289 (385)
T TIGR01825 268 --------------------------------------------------------AVVAALAAAVDELQRS--PELMER 289 (385)
T ss_pred --------------------------------------------------------HHHHHHHHHHHHHhcC--HHHHHH
Confidence 0011111222221111 234566
Q ss_pred HHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCC-c
Q psy14299 323 AVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQH-R 401 (448)
Q Consensus 323 ~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g-~ 401 (448)
..++++++.+.|+++ |++++ .+..+.+.+...+ .. ...++.+.|.++|+ .+.+..+.. .
T Consensus 290 ~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~-~~---------------~~~~~~~~L~~~gi-~v~~~~~~~~~ 349 (385)
T TIGR01825 290 LWDNTRFFKAGLGKL-GYDTG--GSETPITPVVIGD-EK---------------AAQEFSRRLFDEGI-FAQSIVFPTVP 349 (385)
T ss_pred HHHHHHHHHHHHHHc-CCCCC--CCCCCEEEEEECC-HH---------------HHHHHHHHHHHCCc-EEcccCCCCCC
Confidence 677899999999987 88875 3444444443211 00 12368889989984 443322211 1
Q ss_pred ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 402 NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 402 ~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
....++|+++ +.+++++|+++++++|+++.++.
T Consensus 350 ~~~~~iRi~~--~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 350 RGTARIRNIP--TAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred CCCceEEEEE--cCCCCHHHHHHHHHHHHHHHHHh
Confidence 1126899999 78999999999999999987643
No 93
>PRK15029 arginine decarboxylase; Provisional
Probab=99.81 E-value=6.1e-18 Score=182.38 Aligned_cols=158 Identities=20% Similarity=0.185 Sum_probs=126.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--C---CCc
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--R---GQM 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~---g~i 78 (448)
+-+.|+|+|.+|..++.+++. +++.|++++++|.|+..++.+.|+ ..+++++.. . +.+
T Consensus 223 t~FlvNGST~gn~a~i~a~~~--------------~gd~Vlv~RN~HKSv~~al~L~ga---~Pvyl~P~~~~~Gi~~~i 285 (755)
T PRK15029 223 SWSVVVGTSGSNRTIMQACMT--------------DNDVVVVDRNCHKSIEQGLILTGA---KPVYMVPSRNRYGIIGPI 285 (755)
T ss_pred EEEEeCChhHHHHHHHHHhcC--------------CCCEEEeecccHHHHHHHHHHcCC---eEEEecccccccCCccCC
Confidence 446778888888877776665 677899999999999999999999 566665432 1 355
Q ss_pred C-----HHHHHHHHHHhhh----cCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhh
Q psy14299 79 I-----CSFLEQTIQTSLA----EKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVL 149 (448)
Q Consensus 79 d-----~e~Le~~l~~~~~----~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~ 149 (448)
+ ++.++++|++... .+.+|++|+++++++ .|...|+++|+++||++|++++||+|||++..+.+.++..
T Consensus 286 ~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~- 363 (755)
T PRK15029 286 YPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADH- 363 (755)
T ss_pred CccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECccccccccCcccccc-
Confidence 5 9999999976321 234677999999888 9999999999999999999999999999988766654421
Q ss_pred cCC-------CCcc-EEEECCccccCCCCceEEEEEecc
Q psy14299 150 KGI-------NRAN-SVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 150 ~~~-------~~aD-~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
..+ .++| +++.|.||.|.+..+++++.+++.
T Consensus 364 sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~ 402 (755)
T PRK15029 364 YAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_pred ccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence 111 3588 889999999999999999999654
No 94
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.80 E-value=3.7e-19 Score=175.10 Aligned_cols=153 Identities=21% Similarity=0.156 Sum_probs=121.2
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC------CCc
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER------GQM 78 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~------g~i 78 (448)
.++|+|+|++|..++.+... +++.|++++.+|.|+..++.+.|. +++.++.+.+ +.+
T Consensus 78 ~~~~~Gst~a~~~~l~al~~--------------~gd~Vlv~~~~h~s~~~~~~~~g~---~~~~v~~~~~~~~~~~~~i 140 (294)
T cd00615 78 FFLVNGTSSSNKAVILAVCG--------------PGDKILIDRNCHKSVINGLVLSGA---VPVYLKPERNPYYGIAGGI 140 (294)
T ss_pred EEEcCcHHHHHHHHHHHcCC--------------CCCEEEEeCCchHHHHHHHHHCCC---EEEEecCccCcccCcCCCC
Confidence 34588889999888766543 677899999999999999999887 6777766532 479
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
|++++++++++. .++++|+++++ |++|.+.|+++|.++||++|++++||+||+.+..+.+..+..... ..+|++
T Consensus 141 ~~~~l~~~l~~~----~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~-~~~div 214 (294)
T cd00615 141 PPETFKKALIEH----PDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAM-AGADIV 214 (294)
T ss_pred CHHHHHHHHHhC----CCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhh-cCCcEE
Confidence 999999999752 35788999887 579999999999999999999999999999765433322211111 258999
Q ss_pred EECCccccCCCCceEEEEEecc
Q psy14299 159 SWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 159 ~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
+.|+||++++|.++|+++++++
T Consensus 215 ~~S~hK~l~g~~~~~~l~~~~~ 236 (294)
T cd00615 215 VQSTHKTLPALTQGSMIHVKGD 236 (294)
T ss_pred EEchhcccchHhHHHHHHhCCC
Confidence 9999999999988888887664
No 95
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.80 E-value=9.5e-19 Score=176.87 Aligned_cols=157 Identities=24% Similarity=0.255 Sum_probs=117.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-----CCc
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-----GQM 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-----g~i 78 (448)
+-+.|+|+|.+|..++++++. +++.|++++++|.|+..++.+.|+ ..+++++..+ +.+
T Consensus 84 t~flvnGsT~g~~a~i~a~~~--------------~gd~VLv~RN~HkSv~~alil~ga---~Pvyi~p~~~~~gi~~~i 146 (417)
T PF01276_consen 84 TFFLVNGSTSGNQAMIMALCR--------------PGDKVLVDRNCHKSVYNALILSGA---IPVYIPPEDNEYGIIGGI 146 (417)
T ss_dssp EEEESSHHHHHHHHHHHHHTT--------------TTCEEEEETT--HHHHHHHHHHTE---EEEEEEEEE-TTS-BEEB
T ss_pred EEEEecCchHHHHHHHHHhcC--------------CCCEEEEcCCcHHHHHHHHHHcCC---eEEEecCCccccCCccCC
Confidence 345667777888888887765 678899999999999999999999 6666665421 356
Q ss_pred CH-----HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCC
Q psy14299 79 IC-----SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGIN 153 (448)
Q Consensus 79 d~-----e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~ 153 (448)
++ +.++++|++..+.. .+++|+++++++ .|...|+++|+++||++|+.++||+|||++..+.+-... ...+
T Consensus 147 ~~~~~~~~~i~~~l~~~p~~k-~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~-a~~~- 222 (417)
T PF01276_consen 147 SPDEFNEEDIEEALKEHPDAK-APRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRS-ALAL- 222 (417)
T ss_dssp -GGGGSHHHHHHHHHHCTTCH-CESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTT-CSST-
T ss_pred ChhhhhHHHHHHHHHhCcccc-CceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccc-hhhc-
Confidence 77 99999998743221 256699999888 999999999999999999999999999998876632222 1122
Q ss_pred Ccc-------EEEECCccccCCCCceEEEEEeccc
Q psy14299 154 RAN-------SVSWNPHKMLGAPLQCSILLIKEKG 181 (448)
Q Consensus 154 ~aD-------~~~~s~hK~l~~P~g~G~l~vr~~~ 181 (448)
++| +++.|.||.|.+..+++++.+++..
T Consensus 223 gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~ 257 (417)
T PF01276_consen 223 GADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDR 257 (417)
T ss_dssp TSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCC
T ss_pred cCccccccceeeeechhhcccccccceEEEecCCC
Confidence 588 9999999999999999999998875
No 96
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.80 E-value=2.2e-17 Score=165.91 Aligned_cols=271 Identities=15% Similarity=0.129 Sum_probs=177.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+|+++..++..... +++.|+++...+..+...++..|. +++.++.++++.+|++++
T Consensus 73 ~i~~~~G~~~~l~~~~~~l~~--------------~gd~v~~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~d~~~l 135 (346)
T TIGR01141 73 QILLGNGSDEIIELLIRAFLE--------------PGDAVLVPPPTYSMYEISAKIHGA---EVVKVPLDEDGQLDLEDI 135 (346)
T ss_pred HEEEcCCHHHHHHHHHHHhcC--------------CCCEEEEcCCCHHHHHHHHHHcCC---eEEEeccCCCCCCCHHHH
Confidence 468999999997666655433 456788888887777777888888 788999988888999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc--CCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY--DLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~--g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
++.+.+ ++++|++++++|++|...|++++.++++.+ |+++++|++|+..... .......... ..++++.|
T Consensus 136 ~~~~~~------~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~-~~~~~~~~~~-~~~i~~~S 207 (346)
T TIGR01141 136 LVAIDD------KPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGE-PSTLPLLAEY-PNLIVLRT 207 (346)
T ss_pred HHhcCC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCC-ccHHHHHhhC-CCEEEEeh
Confidence 997633 578999999999999999999999999887 9999999998843221 0111111111 12466678
Q ss_pred CccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 162 PHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 162 ~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
++|+++.| ..+|+++.++ .+..........+ + .......
T Consensus 208 ~sK~~g~~G~r~G~~~~~~-~~~~~~~~~~~~~-----------------~------~~~~~~~---------------- 247 (346)
T TIGR01141 208 LSKAFGLAGLRIGYAIANA-EIIDALNKVRAPF-----------------N------LSRLAQA---------------- 247 (346)
T ss_pred hhHhhhchhhhceeeecCH-HHHHHHHhccCCC-----------------C------CCHHHHH----------------
Confidence 89999755 2478887743 3433322111000 0 0000000
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
.+...++.. .+++++.
T Consensus 248 --------------------------------------------------------------~~~~~l~~~--~~~~~~~ 263 (346)
T TIGR01141 248 --------------------------------------------------------------AAIAALRDD--DFIEKTV 263 (346)
T ss_pred --------------------------------------------------------------HHHHHhCCH--HHHHHHH
Confidence 000111111 1355667
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCC
Q psy14299 321 DNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQH 400 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g 400 (448)
++..++++++.+.|+++||+++. ++....+.+.+ +. . ..++.+.|.++| +.+.+....+
T Consensus 264 ~~~~~~~~~l~~~L~~~~g~~~~--~~~g~~~~~~~-~~--~---------------~~~~~~~L~~~g-I~v~~g~~f~ 322 (346)
T TIGR01141 264 EEINAERERLYDGLKKLPGLEVY--PSDANFVLIRF-PR--D---------------ADALFEALLEKG-IIVRDLNSYP 322 (346)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEC--CCcCCEEEEec-CC--C---------------HHHHHHHHHHCC-eEEEeCCCcC
Confidence 77888899999999999999864 33444444432 11 1 137888999998 5555543321
Q ss_pred cccccEEEEEecCCCCCCHHHHHHHHHHHH
Q psy14299 401 RNLHNFFRLVTTCHPASSRQDMDYAIDQIE 430 (448)
Q Consensus 401 ~~~~~~lRis~~~~~~~t~edid~l~~al~ 430 (448)
.. ++++|+|+ + +++|+++++++|+
T Consensus 323 ~~-~~~iRls~--~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 323 GL-PNCLRITV--G---TREENDRFLAALR 346 (346)
T ss_pred CC-CCeEEEec--C---CHHHHHHHHHHhC
Confidence 11 47899998 3 7899999998873
No 97
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.80 E-value=1.5e-17 Score=184.60 Aligned_cols=288 Identities=10% Similarity=0.080 Sum_probs=186.0
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCcCH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~id~ 80 (448)
.-++.++|.+.-..+++.+.. . ..++.|++++..|++....+ +..|+ +++.++.+.+ ++
T Consensus 141 aSl~d~aTAa~ea~~~a~~~~-------~----~~~~~vlv~~~~hP~~~~v~~t~a~~~G~---ev~~~~~~~d--~~- 203 (954)
T PRK05367 141 ASLLDEATAAAEAMALAKRVS-------K----SKSNRFFVDDDVHPQTLDVLRTRAEPLGI---EVVVGDAAKA--LD- 203 (954)
T ss_pred ccccccHHHHHHHHHHhhhhc-------c----CCCCEEEEcCccCHHHHHHHHHHHHhCCC---EEEEecCccC--CC-
Confidence 456777787643333322221 0 01357999999999987664 44566 7888887542 11
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
. ..+ ..++++.++.+|.+.|+++|+++||++|++++||+.+.+.....+. ..+ ++|+++.
T Consensus 204 --------~-----~~~-~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~p-----ge~-GaDi~vg 263 (954)
T PRK05367 204 --------H-----DDV-FGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPP-----GEM-GADIAVG 263 (954)
T ss_pred --------c-----ccE-EEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCCh-----hhc-CCCEEEe
Confidence 1 123 4445555677999999999999999999999999966433332221 112 5899999
Q ss_pred CCccc-----cCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHH
Q psy14299 161 NPHKM-----LGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 235 (448)
Q Consensus 161 s~hK~-----l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ 235 (448)
++||| +|+| ++|+|+++++ +.... .+..+.. +....+...+ .+.+
T Consensus 264 s~qkfg~P~g~GGP-~aGflavr~~-~~r~l---pgrivG~-s~d~~g~~~~-~lal----------------------- 313 (954)
T PRK05367 264 SAQRFGVPMGFGGP-HAAYFAVRDA-YKRSM---PGRIVGV-SVDAAGNPAL-RLAL----------------------- 313 (954)
T ss_pred eCcccCCCCCCCCC-CEEEEEECHH-HHhhC---CCCeeee-ecccCCCccc-cccc-----------------------
Confidence 99999 5666 5999999875 33222 1222221 1000000000 0000
Q ss_pred HHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCcc
Q psy14299 236 RHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 315 (448)
Q Consensus 236 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 315 (448)
+.-+++++..++.+++|+. + ...++.....+.+.+.+|
T Consensus 314 -qtReqhiRrekaTsNict~-------------q----------------------------aL~a~~a~~y~~~~g~~G 351 (954)
T PRK05367 314 -QTREQHIRREKATSNICTA-------------Q----------------------------VLLAVMASMYAVYHGPEG 351 (954)
T ss_pred -ccccccccccccccccchH-------------H----------------------------HHHHHHHHHHHHHHhhhh
Confidence 0112334445666666661 1 112334445578899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEe
Q psy14299 316 FRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGY 395 (448)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~ 395 (448)
++++.++.+.+++|++++|++ +|+++. .++.+.++.|.+ +. + ..++.++|.++|+. +..
T Consensus 352 l~~Ia~~~~~la~~l~~~L~~-~G~~~~-~~~~f~~~~~~~-~~--~---------------~~~i~~~l~~~gi~-~~~ 410 (954)
T PRK05367 352 LKAIARRVHRLAAILAAGLRA-LGLEVV-HDSFFDTLTVEV-GG--D---------------AAAVLARALAAGIN-LRR 410 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCcccC-CCCCCCeEEEeC-CC--C---------------HHHHHHHHHHCCce-ecc
Confidence 999999999999999999988 599987 666677777763 11 1 23789999999943 321
Q ss_pred eecCCcccccEEEEEecCCCCCCHHHHHHHHHHHH
Q psy14299 396 QPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIE 430 (448)
Q Consensus 396 ~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~ 430 (448)
. .. +.+|+|+ |.++|++|||+|+++|.
T Consensus 411 --~-~~---~~l~is~--~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 411 --V-DD---DHVGISL--DETTTREDLAALLAVFG 437 (954)
T ss_pred --c-cC---CEEEEEe--cccCCHHHHHHHHHHHc
Confidence 1 11 5799999 89999999999999997
No 98
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.79 E-value=2.2e-17 Score=168.07 Aligned_cols=285 Identities=13% Similarity=0.077 Sum_probs=182.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC---CCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE---RGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~---~g~id~ 80 (448)
..++|+|+++++..++....+ +++.|+++...|..+...++..|. +++.+|.+. ++.+|+
T Consensus 86 ~i~~t~g~~~al~~~~~~l~~--------------~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~ 148 (382)
T PRK06108 86 RIAVTSSGVQALMLAAQALVG--------------PGDEVVAVTPLWPNLVAAPKILGA---RVVCVPLDFGGGGWTLDL 148 (382)
T ss_pred eEEEeCChHHHHHHHHHHhcC--------------CCCEEEEeCCCccchHHHHHHCCC---EEEEeeCCCCCCCccCCH
Confidence 467899999998877766543 566788898999999999998888 788999864 346999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCcccccc---CHHHHHHHHHHcCCEEEEeccccccccc-ccchhh--hhcCCCC
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFD---PLDEIATVCEKYDLWMHVDACWGGSLIF-SEKYSF--VLKGINR 154 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~---~l~~I~~ia~~~g~~l~VD~A~~~~~~~-~~~~~~--~~~~~~~ 154 (448)
+++++.+.+ +++++++++++|+||.+. ++++|.++|+++|+++++|++|+..... ...... .+.....
T Consensus 149 ~~l~~~~~~------~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 222 (382)
T PRK06108 149 DRLLAAITP------RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDD 222 (382)
T ss_pred HHHHHhcCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcC
Confidence 999998853 478899999999999775 4788999999999999999998866542 111000 0111111
Q ss_pred ccEEEECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChH
Q psy14299 155 ANSVSWNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 233 (448)
Q Consensus 155 aD~~~~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 233 (448)
-.+++.+++|.++.| ..+|+++.++ ++....... ..+... ....
T Consensus 223 ~~i~~~S~SK~~g~~G~RiG~~~~~~-~~~~~~~~~-~~~~~~-----------------~~~~---------------- 267 (382)
T PRK06108 223 RIIFVNSFSKNWAMTGWRLGWLVAPP-ALGQVLEKL-IEYNTS-----------------CVAQ---------------- 267 (382)
T ss_pred CEEEEeechhhccCcccceeeeeCCH-HHHHHHHHH-HHhccc-----------------CCCh----------------
Confidence 247778999988654 3578887744 333322110 000000 0000
Q ss_pred HHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcC
Q psy14299 234 GFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 313 (448)
Q Consensus 234 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (448)
+.+..+..+++. +.
T Consensus 268 -----------------------------------------------------------------~~q~a~~~~l~~-~~ 281 (382)
T PRK06108 268 -----------------------------------------------------------------FVQRAAVAALDE-GE 281 (382)
T ss_pred -----------------------------------------------------------------HHHHHHHHHHhC-Ch
Confidence 000001111111 12
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHh-CCcEE
Q psy14299 314 LGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVL-GGTLM 392 (448)
Q Consensus 314 ~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~-~g~~~ 392 (448)
..++++.++..++++++.+.|+++||+++. +|..+.+.+.-.+...+ ..++.+.|++ +| +.
T Consensus 282 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~p~~g~~~~~~l~~~~~---------------~~~~~~~ll~~~g-V~ 343 (382)
T PRK06108 282 DFVAELVARLRRSRDHLVDALRALPGVEVA--KPDGAMYAFFRIPGVTD---------------SLALAKRLVDEAG-LG 343 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCccc--CCCeeEEEEEeCCCCCC---------------HHHHHHHHHHhCC-EE
Confidence 234566777888899999999998898875 45556555432222111 2367788764 57 55
Q ss_pred EEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 393 IGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 393 ~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
+.++...+....+++|+|+. . ++++++..++.|+++.+
T Consensus 344 v~pg~~f~~~~~~~~Ris~~--~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 344 LAPGTAFGPGGEGFLRWCFA--R--DPARLDEAVERLRRFLA 381 (382)
T ss_pred EeCchhhCCCCCCEEEEEec--C--CHHHHHHHHHHHHHHHh
Confidence 55443222222479999994 3 78889988888877653
No 99
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.78 E-value=1.2e-16 Score=163.29 Aligned_cols=142 Identities=15% Similarity=0.169 Sum_probs=105.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++.++|+++|+.++.+..+ +++.|++++..|.|+..++.+.+. ++..++++ |++++
T Consensus 60 ~al~~~sG~~a~~~~i~~l~~--------------~GD~Vl~~~~~h~s~~~~~~l~~~---~~~~~~~~-----d~~~l 117 (392)
T PLN03227 60 SAILYSDGASTTSSTVAAFAK--------------RGDLLVVDRGVNEALLVGVSLSRA---NVRWFRHN-----DMKDL 117 (392)
T ss_pred cEEEecCcHHHHHHHHHHhCC--------------CCCEEEEeccccHHHHHHHHHcCC---eEEEeCCC-----CHHHH
Confidence 568889999998877666432 778899999999999999887776 67777765 56666
Q ss_pred HHHHHHhhh--------cCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEeccccccccccc-chhhh---hcC
Q psy14299 84 EQTIQTSLA--------EKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSE-KYSFV---LKG 151 (448)
Q Consensus 84 e~~l~~~~~--------~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~-~~~~~---~~~ 151 (448)
++.++.... ..+++++|++..+.+++|.+.|+++|.++|++||+++++|++|+.+..--. ..... +..
T Consensus 118 ~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p 197 (392)
T PLN03227 118 RRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKP 197 (392)
T ss_pred HHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCC
Confidence 665543211 123578999999999999999999999999999999999999986543110 00000 111
Q ss_pred CCCccEEEECCccccC
Q psy14299 152 INRANSVSWNPHKMLG 167 (448)
Q Consensus 152 ~~~aD~~~~s~hK~l~ 167 (448)
...+|+++.+.+|.++
T Consensus 198 ~~~~Div~~slsk~~g 213 (392)
T PLN03227 198 MVHAEIVTFSLENAFG 213 (392)
T ss_pred CCCceEEEeechhhhh
Confidence 2357999999999876
No 100
>PLN02271 serine hydroxymethyltransferase
Probab=99.78 E-value=2.2e-17 Score=170.61 Aligned_cols=300 Identities=13% Similarity=0.082 Sum_probs=192.1
Q ss_pred eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH---------HHHHHhCCCCCcEEEEe--cC-CC
Q psy14299 8 LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML---------KAAHWLGIGMDNVIRVK--TN-ER 75 (448)
Q Consensus 8 t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~---------~~~~~~g~~~~~v~~v~--~~-~~ 75 (448)
..+|+.||+.++.+..+ |++.|+..+..|-... +.+...|+ .+..++ ++ ++
T Consensus 220 p~SGs~AN~aV~~ALl~--------------PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~---~~~~vpY~~d~~~ 282 (586)
T PLN02271 220 PYSCTSANFAVYTGLLL--------------PGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASI---FFESLPYKVNPQT 282 (586)
T ss_pred eccHHHHHHHHHHHhcC--------------CCCEEEEecCCCCCchhcccccccccccccccc---eEEEEEccccccc
Confidence 45999999998877643 7788887655544322 22234454 455555 54 57
Q ss_pred CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCc
Q psy14299 76 GQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRA 155 (448)
Q Consensus 76 g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~a 155 (448)
|.+|++++++.... .+|++|++.+..++ ...|+++|.++|+++|++++||+||.+|.+..+..+.- +..+
T Consensus 283 g~IDyd~lek~a~~-----~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP---~~~a 352 (586)
T PLN02271 283 GYIDYDKLEEKALD-----FRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNP---FDYC 352 (586)
T ss_pred CccCHHHHHHHhhh-----cCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCC---CcCC
Confidence 89999999996544 37999999777776 77999999999999999999999999999866544322 2358
Q ss_pred cEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHH
Q psy14299 156 NSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 235 (448)
Q Consensus 156 D~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ 235 (448)
|++++++||||.+|.| |+++++++. ... ..+....... ... ...+
T Consensus 353 Dvvt~TTHKtLrGPrG-G~I~~r~~~-~~~---~~g~~gs~s~--------------~~~----------------~~d~ 397 (586)
T PLN02271 353 DIVTSTTHKSLRGPRG-GIIFYRKGP-KLR---KQGMLLSHGD--------------DNS----------------HYDF 397 (586)
T ss_pred cEEEeCCcccCCCCCc-eEEEecccc-ccc---ccCCcccccc--------------ccc----------------cHHH
Confidence 9999999999999999 777776542 111 1111110000 000 0001
Q ss_pred HHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcccccc-chhhHHHHHHHHHhcCc
Q psy14299 236 RHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGR-KVDAFKLWLMWKARGNL 314 (448)
Q Consensus 236 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 314 (448)
.+.|+..+- -.++.++ .--+.++++++++....
T Consensus 398 ~~kI~~aVf----------------------------------------------PglqgGphn~~IAalAvalkea~~~ 431 (586)
T PLN02271 398 EEKINFAVF----------------------------------------------PSLQGGPHNNHIAALAIALKQVATP 431 (586)
T ss_pred HHHhhcccC----------------------------------------------CccccChhHHHHHHHHHHHHHHhCh
Confidence 111111000 0112222 11245566778877777
Q ss_pred cHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEE
Q psy14299 315 GFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIG 394 (448)
Q Consensus 315 G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~ 394 (448)
.+++..++..++++.|.+.|.+. ||+++....+.+.+.+.+.+.++++ ....+.|.+.| |.+.
T Consensus 432 efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTdnHlvLvDl~~~g~~G---------------~~ae~~Le~~~-I~~N 494 (586)
T PLN02271 432 EYKAYMQQVKKNAQALASALLRR-KCRLVTGGTDNHLLLWDLTTLGLTG---------------KNYEKVCEMCH-ITLN 494 (586)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCCCcceeeecCcccCCCH---------------HHHHHHHHHcC-eEec
Confidence 78889999999999999999998 9999843345677777665544432 24444555556 5554
Q ss_pred eeecCCc---ccccEEEEEecCCCCC----CHHHHHHHHHHHHHHHH
Q psy14299 395 YQPLQHR---NLHNFFRLVTTCHPAS----SRQDMDYAIDQIELRGA 434 (448)
Q Consensus 395 ~~~~~g~---~~~~~lRis~~~~~~~----t~edid~l~~al~~~~~ 434 (448)
-..+.+. ..++.+|++. ...| .++|++++.+.|.++.+
T Consensus 495 kn~iP~d~~~~~psGiRiGT--~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 495 KTAIFGDNGTISPGGVRIGT--PAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred cccCCCCCCCCCCCcccccC--HHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 3222221 1236799987 3444 45899998888888765
No 101
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.78 E-value=1.7e-16 Score=162.25 Aligned_cols=288 Identities=13% Similarity=0.063 Sum_probs=182.8
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICSF 82 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e~ 82 (448)
.++|+|+++++..++.+... +++.|+++...|..+..+++..|. +++.++.++ ++.+|+++
T Consensus 94 i~~~~g~~~a~~~~~~~~~~--------------~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~ 156 (393)
T PRK05764 94 VIVTTGAKQALYNAFMALLD--------------PGDEVIIPAPYWVSYPEMVKLAGG---VPVFVPTGEENGFKLTVEQ 156 (393)
T ss_pred EEEeCCcHHHHHHHHHHhcC--------------CCCEEEecCCCCcchHHHHHHcCC---EEEEEecCcccCCcCCHHH
Confidence 68999999998877766543 456788999999999999998888 788888864 45789999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccc---hhhhhcCCCCcc
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEK---YSFVLKGINRAN 156 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~---~~~~~~~~~~aD 156 (448)
+++.+++ ++++|++++++|++|.+.+ +++|.++|++||+++++|.+|+........ ......+....+
T Consensus 157 l~~~l~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 230 (393)
T PRK05764 157 LEAAITP------KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRT 230 (393)
T ss_pred HHHhhCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCE
Confidence 9998853 4678999999999998754 889999999999999999998754431111 111001112346
Q ss_pred EEEECCccccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHH
Q psy14299 157 SVSWNPHKMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 235 (448)
Q Consensus 157 ~~~~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ 235 (448)
++..++.|.++.|. .+|+++. ++++..........+... ...+..+.+.+.
T Consensus 231 i~~~s~SK~~~~~G~RiG~i~~-~~~~~~~~~~~~~~~~~~---------------------~~~~~q~~~~~~------ 282 (393)
T PRK05764 231 ITVNGFSKAYAMTGWRLGYAAG-PKELIKAMSKLQSHSTSN---------------------PTSIAQYAAVAA------ 282 (393)
T ss_pred EEEecCcccccCccceeEEEec-CHHHHHHHHHHHhhcccC---------------------CChHHHHHHHHH------
Confidence 77889999987663 2677664 333333321110000000 000111111111
Q ss_pred HHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCcc
Q psy14299 236 RHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 315 (448)
Q Consensus 236 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 315 (448)
++. ..+.
T Consensus 283 ------------------------------------------------------------------------l~~-~~~~ 289 (393)
T PRK05764 283 ------------------------------------------------------------------------LNG-PQDE 289 (393)
T ss_pred ------------------------------------------------------------------------HcC-ChHH
Confidence 110 1123
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHh-CCcEEEE
Q psy14299 316 FRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVL-GGTLMIG 394 (448)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~-~g~~~~~ 394 (448)
+++..++..++++++.+.|+++||+++. ++..+.+.+...+...... .....++.+.|.+ .| +.+.
T Consensus 290 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~g~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~g-i~v~ 356 (393)
T PRK05764 290 VEEMRQAFEERRDLMVDGLNEIPGLECP--KPEGAFYVFPNVSKLLGKS----------ITDSLEFAEALLEEAG-VAVV 356 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCccc--CCCcceEEEEecccccccc----------cCCHHHHHHHHHHhCC-EEEc
Confidence 4455666777888899999999898875 3454444442222221100 0012367777765 57 5554
Q ss_pred eeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 395 YQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 395 ~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
++...+. ++++|++++ .++++++.+++.|.++.++
T Consensus 357 ~g~~f~~--~~~vRis~~----~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 357 PGIAFGA--PGYVRLSYA----TSLEDLEEGLERIERFLES 391 (393)
T ss_pred cccccCC--CCEEEEEec----CCHHHHHHHHHHHHHHHHh
Confidence 4433332 479999995 2699999999999988764
No 102
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.78 E-value=6.5e-17 Score=164.74 Aligned_cols=150 Identities=12% Similarity=0.101 Sum_probs=109.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC---CCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE---RGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~---~g~id~ 80 (448)
.+++|+|+|+++..++..... +++.|++++..|......++..|. +++.++.+. ++.+|+
T Consensus 85 ~v~~~~g~t~al~~~~~~~~~--------------~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~ 147 (380)
T PRK06225 85 EALITAGATESLYLVMRAFLS--------------PGDNAVTPDPGYLIIDNFASRFGA---EVIEVPIYSEECNYKLTP 147 (380)
T ss_pred cEEEeCCHHHHHHHHHHHhcC--------------CCCEEEEcCCCCcchHHHHHHhCc---eEEeeccccccCCccCCH
Confidence 589999999998888776543 456688888888877788888888 788888642 458999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCcccccc---CHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFD---PLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~---~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
+++++.+.+ +++++++++++|++|.+. ++++|+++|++||+++++|++++......... .... ....+
T Consensus 148 ~~l~~~~~~------~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~-~~~~--~~~~i 218 (380)
T PRK06225 148 ELVKENMDE------NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLA-AEYA--PEHTV 218 (380)
T ss_pred HHHHhhcCC------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCch-hhcC--CCCEE
Confidence 999998854 477888899999999865 49999999999999999999975321110000 0011 12346
Q ss_pred EEECCccccCCCC-ceEEEEEec
Q psy14299 158 VSWNPHKMLGAPL-QCSILLIKE 179 (448)
Q Consensus 158 ~~~s~hK~l~~P~-g~G~l~vr~ 179 (448)
++.+++|+++.|. .+|+++.++
T Consensus 219 ~~~s~SK~~g~~G~RiG~i~~~~ 241 (380)
T PRK06225 219 TSYSFSKIFGMAGLRIGAVVATP 241 (380)
T ss_pred EEeechhhcCCccceeEEEecCH
Confidence 6678899996442 368887754
No 103
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.78 E-value=7.8e-17 Score=178.24 Aligned_cols=290 Identities=11% Similarity=0.034 Sum_probs=188.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHH----hCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHW----LGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~----~g~~~~~v~~v~~~~~g~id 79 (448)
..-++.++|.+.-.++++.+.. . .+++.|++++..|++....++. .|+ +++.++.+.. +
T Consensus 167 naSL~d~aTAaaea~~~a~~~~-------~----g~~~~VlVs~~~hP~~~~v~~t~a~~~Gi---eV~~v~~~~~---~ 229 (993)
T PLN02414 167 NASLLDEGTAAAEAMAMCNNIL-------K----GKKKKFLIASNCHPQTIDVCQTRADGLGL---EVVVADEKDF---D 229 (993)
T ss_pred hEeecCChHHHHHHHHHHHhcc-------c----CCCCEEEEcCccCHhHHHHHHHhhhhcCC---EEEEecchhh---c
Confidence 4567888887744333332221 1 1346799999999998777653 355 6888876421 1
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
... ... ..++++..+.+|.+.|+++|+++||++|++++| +|+..+...+.. ...+ ++|+++
T Consensus 230 ------~~~------~~v-~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~----pge~-GADi~v 290 (993)
T PLN02414 230 ------YSS------GDV-CGVLVQYPATDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKP----PGEW-GADIVV 290 (993)
T ss_pred ------ccc------Cce-EEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCC----Hhhc-cCcEEE
Confidence 111 112 344466666799999999999999999999999 888877765532 1122 589999
Q ss_pred ECCcccc-----CCCCceEEEEEeccchhhhhccCCcc-cccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChH
Q psy14299 160 WNPHKML-----GAPLQCSILLIKEKGLLHQANATAAT-YLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 233 (448)
Q Consensus 160 ~s~hK~l-----~~P~g~G~l~vr~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 233 (448)
.++|||+ ++|. +|+|+++++ +.. ..|+ .+.. +.... +++...+ +++
T Consensus 291 gsgqKwg~P~G~GGP~-aGflavr~~-~~r----~~PgriVG~-s~d~~------------g~~~~~l----~Lq----- 342 (993)
T PLN02414 291 GSAQRFGVPMGYGGPH-AAFLATSQE-YKR----LMPGRIIGV-SVDSS------------GKPALRM----AMQ----- 342 (993)
T ss_pred ECCCccccCCCCCCCC-eeEEEECHH-HHh----hCCCcccCc-ccCCC------------CCccccc----ccc-----
Confidence 9999998 5555 899999875 222 1222 2322 11000 0010000 000
Q ss_pred HHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcC
Q psy14299 234 GFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 313 (448)
Q Consensus 234 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (448)
.=+++++..++.+++|+.. .+. +......+.+.+.
T Consensus 343 ----tReqhiRrEkaTsNict~q-----aL~------------------------------------A~la~~y~~~~g~ 377 (993)
T PLN02414 343 ----TREQHIRRDKATSNICTAQ-----ALL------------------------------------ANMAAMYAVYHGP 377 (993)
T ss_pred ----cccchhhhcccccchhHHH-----HHH------------------------------------HHHHHHHHHHhcc
Confidence 0123344556666666611 111 1111123568899
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEE
Q psy14299 314 LGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMI 393 (448)
Q Consensus 314 ~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~ 393 (448)
+|++++.++.+.++.+++++|.+. |+++. .++.+.+++|.+. . ..++.++|.++|+ .+
T Consensus 378 ~Gl~~Ia~ri~~la~~l~~~L~~~-G~~~~-~~~~f~~vt~~~~----~---------------~~~v~~~L~~~gI-~l 435 (993)
T PLN02414 378 EGLKTIAQRVHGLAGVFAAGLKKL-GFQVQ-SLPFFDTVKVKCS----D---------------ADAIADAAAKVGI-NL 435 (993)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhc-CCccC-CCCCcCeEEEecC----C---------------HHHHHHHHHHCCC-ee
Confidence 999999999999999999999885 89987 6677888888642 1 1378899999994 33
Q ss_pred EeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy14299 394 GYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELR 432 (448)
Q Consensus 394 ~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~ 432 (448)
.... + +.+|+|+ |++||++|||+|+++|...
T Consensus 436 ~~~~--~----~~lrvs~--~e~~T~edId~L~~~l~~~ 466 (993)
T PLN02414 436 RVVD--A----NTVTVSF--DETTTLEDVDKLFKVFAGG 466 (993)
T ss_pred EEec--C----CeEEEEe--eccCCHHHHHHHHHHHccc
Confidence 3221 2 5799999 8999999999999999743
No 104
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.77 E-value=1.7e-16 Score=162.19 Aligned_cols=153 Identities=16% Similarity=0.155 Sum_probs=111.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++..++..... +++.|+++...+......++..|. +++.++.+.++.+|++++
T Consensus 91 ~i~~t~G~~~~l~~~~~~~~~--------------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l 153 (389)
T PRK05957 91 AIVVTAGSNMAFMNAILAITD--------------PGDEIILNTPYYFNHEMAITMAGC---QPILVPTDDNYQLQPEAI 153 (389)
T ss_pred eEEEeCChHHHHHHHHHHhcC--------------CCCEEEEeCCCCcCHHHHHHhcCC---EEEEeecCCCCCcCHHHH
Confidence 378899999998777665433 567788888888777777777788 788999887889999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccc-hhh-hhcCCCCccEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEK-YSF-VLKGINRANSV 158 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~-~~~-~~~~~~~aD~~ 158 (448)
++.+++ ++++|++++++|+||.+.| +++|+++|++||+++++|++|+-....... ... .......--++
T Consensus 154 ~~~i~~------~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (389)
T PRK05957 154 EQAITP------KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTIS 227 (389)
T ss_pred HHhcCc------CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEE
Confidence 998854 4789999999999999887 899999999999999999998754432111 010 00011112255
Q ss_pred EECCccccCCCC-ceEEEEEec
Q psy14299 159 SWNPHKMLGAPL-QCSILLIKE 179 (448)
Q Consensus 159 ~~s~hK~l~~P~-g~G~l~vr~ 179 (448)
+.+..|.++.|. =+|++++.+
T Consensus 228 ~~S~SK~~g~~GlRiG~~~~~~ 249 (389)
T PRK05957 228 LYSLSKAYGFASWRIGYMVIPI 249 (389)
T ss_pred EecchhhccCccceeEEEecCH
Confidence 677889875442 277777644
No 105
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.76 E-value=2.3e-16 Score=160.80 Aligned_cols=154 Identities=14% Similarity=0.130 Sum_probs=115.3
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICSFL 83 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e~L 83 (448)
.++++|||+|+.+++.+..- .+++.|+++..+|.+...++...|. +++.++.++ ++.+|++++
T Consensus 47 ~v~~~sgt~al~~~l~al~~-------------~~Gd~Viv~~~~~~~~~~~~~~~G~---~~~~~~~~~~~~~~d~~~l 110 (380)
T TIGR03588 47 AVAFNSATSALHIACLALGV-------------GPGDRVWTTPITFVATANCALYCGA---KVDFVDIDPDTGNIDEDAL 110 (380)
T ss_pred EEEEcCHHHHHHHHHHHcCC-------------CCCCEEEeCCcchHHHHHHHHHcCC---EEEEEecCCCcCCcCHHHH
Confidence 57788999998888766422 2677899999999999999998898 788998864 678999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++.+++. ..+++++|++++ .+|...|+++|.++|++||+++++|++|+.+... +.... ......|+.++|+|
T Consensus 111 ~~~i~~~--~~~~t~~v~~~~---~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~-~~~~~--g~~~~~d~~~~S~~ 182 (380)
T TIGR03588 111 EKKLAAA--KGKLPKAIVPVD---FAGKSVDMQAIAALAKKHGLKIIEDASHALGAEY-GGKPV--GNCRYADATVFSFH 182 (380)
T ss_pred HHHhhcc--cCCCceEEEEeC---CCCccCCHHHHHHHHHHcCCEEEEECCCcccCcc-CCEeC--CCccccceEEEecC
Confidence 9999732 112577877665 4799999999999999999999999999988652 21111 11013599999998
Q ss_pred --cccCCCCceEEEEEeccchh
Q psy14299 164 --KMLGAPLQCSILLIKEKGLL 183 (448)
Q Consensus 164 --K~l~~P~g~G~l~vr~~~~~ 183 (448)
|++.++. .|+++..++.+.
T Consensus 183 ~~K~~~~~~-GG~v~~~~~~~~ 203 (380)
T TIGR03588 183 PVKIITTAE-GGAVTTNDEELA 203 (380)
T ss_pred CCCcccccC-ceEEEECCHHHH
Confidence 8997764 444555555443
No 106
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.76 E-value=4.5e-17 Score=164.37 Aligned_cols=302 Identities=10% Similarity=0.010 Sum_probs=185.6
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCe-EEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPL-CMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~-~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.+++.|||.+.=.++...... +++ +++++...+.-..+.|+..|+. ++..+..+++..+|++++
T Consensus 61 ~~l~GsGT~a~Eaa~~nl~~~-------------~g~~vLv~g~FG~r~~~eia~~~g~~--~v~~l~~~~g~~~~~~~v 125 (374)
T TIGR01365 61 GIVPASDTGAVEMALWSMLGC-------------RGVDVLAWESFGKGWVTDVTKQLKLP--DVRVLEAEYGKLPDLKKV 125 (374)
T ss_pred EEECCchHHHHHHHHHHcCCC-------------CCCeEEEECHHHHHHHHHHHHhcCCC--CcEEEcCCCCCCCCHHHc
Confidence 355777777765555544321 333 3443322222222888888883 266777777889999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
+. + +.|.++|++|+||+.+|+++|++.+ +++.++||+..+.+..+++.. .+|++..+++
T Consensus 126 e~---~--------~~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d--------~iDv~~tgsQ 184 (374)
T TIGR01365 126 DF---K--------NDVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH--------KLDVVTFSWQ 184 (374)
T ss_pred CC---C--------CCEEEecCCCchheecccccccccc--CCCcEEEEccchhcCCCCChh--------HCcEEEEech
Confidence 72 1 1267999999999999998776433 589999999988888766532 2799999999
Q ss_pred cccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhh
Q psy14299 164 KMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAV 243 (448)
Q Consensus 164 K~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~ 243 (448)
|+|++|+|.+++.++++.+.. ..... .|..... +.++.... . +| ..+
T Consensus 185 K~L~~ppGls~v~vs~~Al~~-~~~~~-~y~~~~~--------~~~~~~~~--~-----~~------------~~~---- 231 (374)
T TIGR01365 185 KVLGGEGAHGMLILSPRAVAR-LESYT-PAWPLPK--------IFRLTKGG--K-----LN------------KKI---- 231 (374)
T ss_pred hccCCCCceEEEEECHHHHHH-HhhcC-CCCCChh--------hhcccccc--c-----hh------------hhh----
Confidence 999999999999998876533 22111 1221100 00000000 0 00 000
Q ss_pred hhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcccccc---chhhHHHHHHHHHhcCc-cHHHH
Q psy14299 244 DCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGR---KVDAFKLWLMWKARGNL-GFRHF 319 (448)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-G~~~~ 319 (448)
+..+... .....++..+++++.++ |++.+
T Consensus 232 -----------------------------------------------~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~ 264 (374)
T TIGR01365 232 -----------------------------------------------FEGSTINTPSMLCVEDWLDALKWAESIGGLKPL 264 (374)
T ss_pred -----------------------------------------------hcCCCCCChHHHHHHHHHHHHHHHHHccCHHHH
Confidence 0000111 22233444556666665 89999
Q ss_pred HHHHHHHHHHHHHHhhcCCC-eEEeccC-C--cee-eEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEE
Q psy14299 320 VDNAVDCSRYFLSQISQRPG-FRLVIPE-F--QCT-NICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIG 394 (448)
Q Consensus 320 ~~~~~~l~~~~~~~L~~~pg-~~l~~~~-~--~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~ 394 (448)
.+++.++++.+++.++++ | ++++ .+ + +++ ++++.+.++++++...+.. ..+..++++.|.++| +.+.
T Consensus 265 ~~Rh~~~a~~l~~~l~~l-g~l~~~-~~~~~~rS~tvt~v~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~g-i~i~ 336 (374)
T TIGR01365 265 IARADDNLAVLEAFVAKN-NWIHFL-AETPEIRSNTSVCLKVVDPAIDALDEDAQ-----ADFAKELISTLEKEG-VAYD 336 (374)
T ss_pred HHHHHHHHHHHHHHHHHC-CCcccC-CCChhhcCCCeEEEEeCCccccccccchh-----hHHHHHHHHHHHHCC-EEEe
Confidence 999999999999999999 6 8877 42 2 333 3445443332310000000 001247889999998 4444
Q ss_pred eeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 395 YQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 395 ~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
++...-+ +..+||+++| ..+.+|++.|++.|.=+-+
T Consensus 337 ~G~~~~~--~~~fRIg~~G--~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 337 IGSYRDA--PSGLRIWCGA--TVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred ccccccC--CCceEEecCC--cCCHHHHHHHHHHHHHHHh
Confidence 3322211 3689999985 7899999999999975543
No 107
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.75 E-value=2.4e-16 Score=168.39 Aligned_cols=155 Identities=22% Similarity=0.205 Sum_probs=120.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--C---CCc
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--R---GQM 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~---g~i 78 (448)
+-+.|+|+|.+|..++.++.. +++.|++++++|.|+..++.+.|+ ..+++++.. . |.+
T Consensus 213 tyfvvNGTS~~n~av~~a~~~--------------~Gd~VLvdRN~HKSv~~aLilsga---~PVYl~P~~n~~Gi~g~I 275 (713)
T PRK15399 213 SYIVTNGTSTSNKIVGMYAAP--------------AGSTLLIDRNCHKSLAHLLMMSDV---VPIWLKPTRNALGILGGI 275 (713)
T ss_pred EEEEeCChHHHHHHHHHHhcC--------------CCCEEEeecccHHHHHHHHHHcCC---eeEEecccccccCCcCCC
Confidence 346677778889888887665 678899999999999999999999 566766543 2 356
Q ss_pred CH-----HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEE-EEecccccccccccchhh--hhc
Q psy14299 79 IC-----SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWM-HVDACWGGSLIFSEKYSF--VLK 150 (448)
Q Consensus 79 d~-----e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l-~VD~A~~~~~~~~~~~~~--~~~ 150 (448)
++ +.++++|++..+. ++|+.++++.+|+ .|.+.|+++|.++| |+.+ |||+|||++..+.+..+. .+.
T Consensus 276 ~~~~~~~e~I~~~i~~~p~~-~~p~~vvit~pTY-dGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~sam~ 350 (713)
T PRK15399 276 PRREFTRDSIEEKVAATTQA-QWPVHAVITNSTY-DGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKSGMS 350 (713)
T ss_pred ChhhccHHHHHHHHHhCCCc-CCceEEEEECCCC-CceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcccCCcChhh
Confidence 66 9999999874332 4678899999866 99999999999999 6766 799999998876553331 121
Q ss_pred CCCCccEE---EECCccccCCCCceEEEEEecc
Q psy14299 151 GINRANSV---SWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 151 ~~~~aD~~---~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
+...+|.+ +.|.||.|.+..+++.+.++..
T Consensus 351 ~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~ 383 (713)
T PRK15399 351 GERVPGKVIFETQSTHKMLAAFSQASLIHIKGE 383 (713)
T ss_pred CCCCCCeeeeeeeehhccccccchheeeeecCC
Confidence 21246777 9999999999999999999653
No 108
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.75 E-value=5e-16 Score=159.79 Aligned_cols=293 Identities=10% Similarity=0.011 Sum_probs=189.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC--CCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER--GQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~--g~id~e 81 (448)
..++|+|+++++..++.+... +++.|+++...+..+...++..|. +++.+|.+++ +.+|++
T Consensus 108 ~I~it~Gs~~al~~~~~~~~~--------------~gd~Vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~ 170 (410)
T PRK06290 108 EVIHSIGSKPALAMLPSCFIN--------------PGDVTLMTVPGYPVTGTHTKYYGG---EVYNLPLLEENNFLPDLD 170 (410)
T ss_pred eEEEccCHHHHHHHHHHHhCC--------------CCCEEEEeCCCCccHHHHHHHcCC---EEEEEecCCCcCCcCCHH
Confidence 478999999998777665443 567788898999888899999888 7999998753 567999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhh-hhcCCCCccE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF-VLKGINRANS 157 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~-~~~~~~~aD~ 157 (448)
++++.+.+ ++++|+++.++|+||.+.+ +++|.++|++||+++++|.+|+........... ...+....++
T Consensus 171 ~l~~~~~~------~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I 244 (410)
T PRK06290 171 SIPKDIKE------KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGV 244 (410)
T ss_pred HHHHhhcc------cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEE
Confidence 99988853 4789999999999999888 578888899999999999998865431110000 0111112457
Q ss_pred EEECCccccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHH
Q psy14299 158 VSWNPHKMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 236 (448)
Q Consensus 158 ~~~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~ 236 (448)
++.|+.|.++.|. -+|+++. ++.+..........+...
T Consensus 245 ~i~SfSK~~g~~GlRiG~ii~-~~~l~~~l~~~~~~~~~~---------------------------------------- 283 (410)
T PRK06290 245 EIHSLSKAYNMTGWRLAFVVG-NELIVKAFATVKDNNDSG---------------------------------------- 283 (410)
T ss_pred EEeechhhcCCchhheEeEEe-CHHHHHHHHHHHhccccC----------------------------------------
Confidence 8889999986553 2566554 433332221100000000
Q ss_pred HHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccH
Q psy14299 237 HFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 316 (448)
Q Consensus 237 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 316 (448)
...+.+..+..+++. .+.+
T Consensus 284 -----------------------------------------------------------~~~~~q~aa~~~l~~--~~~~ 302 (410)
T PRK06290 284 -----------------------------------------------------------QFIAIQKAGIYALDH--PEIT 302 (410)
T ss_pred -----------------------------------------------------------CcHHHHHHHHHHhhC--cHHH
Confidence 000000111111111 1224
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee
Q psy14299 317 RHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ 396 (448)
Q Consensus 317 ~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~ 396 (448)
+++.++..+.++++.+.|+++ |+++. ++..+.+.|.-.|++..... . .....++.+.|+++|.+++.+.
T Consensus 303 ~~~~~~~~~~~~~l~~~L~~~-g~~~~--~p~g~f~l~v~lp~~~~~~~-~-------~~~~~~~~~~Ll~~~~v~~~p~ 371 (410)
T PRK06290 303 EKIREKYSRRLDKLVKILNEV-GFKAE--MPGGTFYLYVKAPKGTKSGI-K-------FENAEEFSQYLIKEKLISTVPW 371 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCeec--CCCeeeEEEEECCCccccCC-C-------CCCHHHHHHHHHHhCCEEEECC
Confidence 556677778889999999997 88764 45666655532233221000 0 0012378899998876665543
Q ss_pred ecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 397 PLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 397 ~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
... ++++|++++ .+..++|+.++++++|++...+++
T Consensus 372 ~~~----~~~lRi~~~-~~~~~~~~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 372 DDA----GHFLRFSVT-FEAKDEEEEDRILEEIKRRLSDVE 407 (410)
T ss_pred ccc----cCeEEEEEE-cccccccchhHHHHHHHHHHhhcc
Confidence 222 369999998 578899999999999999988765
No 109
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.75 E-value=1.7e-15 Score=154.93 Aligned_cols=160 Identities=12% Similarity=0.075 Sum_probs=115.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-CCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-GQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-g~id~e~ 82 (448)
..++|+|+|+++.+++..... +++.|+++...|..+...++..|. +++.++.+++ +.+|++.
T Consensus 93 ~i~it~G~~~al~~~~~~~~~--------------~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~d~~~ 155 (391)
T PRK07309 93 EILVTIGATEALSASLTAILE--------------PGDKVLLPAPAYPGYEPIVNLVGA---EIVEIDTTENDFVLTPEM 155 (391)
T ss_pred cEEEeCChHHHHHHHHHHhcC--------------CCCEEEEeCCCCcchHHHHHHcCC---EEEEEecCCcCCcCCHHH
Confidence 478999999998887766533 566788888899999999998888 7888988654 5799999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
|++++++. ..++++|++++++|+||...+ +++|+++|++||+++++|++++..................--+++
T Consensus 156 l~~~~~~~---~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~ 232 (391)
T PRK07309 156 LEKAILEQ---GDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILI 232 (391)
T ss_pred HHHHhhcc---CCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEE
Confidence 99998642 225789999999999998755 899999999999999999998865431111001010011112677
Q ss_pred ECCccccCCCC-ceEEEEEeccchhh
Q psy14299 160 WNPHKMLGAPL-QCSILLIKEKGLLH 184 (448)
Q Consensus 160 ~s~hK~l~~P~-g~G~l~vr~~~~~~ 184 (448)
.|.+|.++.|. -+|+++.. ++++.
T Consensus 233 ~S~SK~~g~~GlRvG~~v~~-~~~~~ 257 (391)
T PRK07309 233 NGLSKSHAMTGWRIGLIFAP-AEFTA 257 (391)
T ss_pred ecChhhccCccceeEEEEeC-HHHHH
Confidence 79999987552 25666654 34443
No 110
>PRK07682 hypothetical protein; Validated
Probab=99.75 E-value=2.6e-16 Score=160.21 Aligned_cols=286 Identities=15% Similarity=0.093 Sum_probs=184.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|+++++.+++.+..+ +++.|++++..|..+...++..|. +++.++.+. ++.+|++
T Consensus 83 ~i~~t~G~~~al~~~~~~l~~--------------~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~ 145 (378)
T PRK07682 83 EIIVTVGASQALDVAMRAIIN--------------PGDEVLIVEPSFVSYAPLVTLAGG---VPVPVATTLENEFKVQPA 145 (378)
T ss_pred cEEEeCChHHHHHHHHHHhCC--------------CCCEEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCCCCHH
Confidence 488999999998887765543 567788999999999888888887 677888753 5689999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchh-hhhcCCCCccE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYS-FVLKGINRANS 157 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~-~~~~~~~~aD~ 157 (448)
+|++++.+ ++++|+++.++|+||.+.+ +++|.++|++|++++++|.+|+......+... ..+.+...-.+
T Consensus 146 ~l~~~~~~------~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i 219 (378)
T PRK07682 146 QIEAAITA------KTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTI 219 (378)
T ss_pred HHHhhcCc------ccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEE
Confidence 99998854 4788889999999998865 88999999999999999999886543211000 01111112346
Q ss_pred EEECCccccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHH
Q psy14299 158 VSWNPHKMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 236 (448)
Q Consensus 158 ~~~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~ 236 (448)
++.|+.|.++.|. -+|+++..+ ++........ .+.. +
T Consensus 220 ~~~S~SK~~~~~GlR~G~~~~~~-~~i~~l~~~~-~~~~--------------~-------------------------- 257 (378)
T PRK07682 220 LISGFSKGFAMTGWRLGFIAAPV-YFSEAMLKIH-QYSM--------------M-------------------------- 257 (378)
T ss_pred EEecCcccccChhhhhhhhhcCH-HHHHHHHHHH-Hhhc--------------c--------------------------
Confidence 7778899987542 377776643 3333221100 0000 0
Q ss_pred HHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccH
Q psy14299 237 HFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 316 (448)
Q Consensus 237 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 316 (448)
|.+.+.+..+..+++. +...+
T Consensus 258 ----------------------------------------------------------~~~~~~q~a~~~~l~~-~~~~~ 278 (378)
T PRK07682 258 ----------------------------------------------------------CAPTMAQFAALEALRA-GNDDV 278 (378)
T ss_pred ----------------------------------------------------------CCCHHHHHHHHHHHhC-ChHHH
Confidence 0000001111111211 12235
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEee-ccCCCccccchhhhhhhhhhhHHHHHHHH-hCCcEEEE
Q psy14299 317 RHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFI-PVSLRDKVEDETWWSTLSKVAPRIKEKLV-LGGTLMIG 394 (448)
Q Consensus 317 ~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g~~~~~ 394 (448)
+++.++..+.++++.+.|+++ |+++. +|..+.+.+... +.+++ ..++.+.|+ ++| +.+.
T Consensus 279 ~~~~~~~~~~~~~~~~~L~~~-~~~~~--~p~g~~~~~~~~~~~~~~---------------~~~~~~~ll~~~g-v~v~ 339 (378)
T PRK07682 279 IRMRDSYRKRRNFFVTSFNEI-GLTCH--VPGGAFYAFPSISSTGLS---------------SEEFAEQLLLEEK-VAVV 339 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCccC--CCCeeEEEEEeccCCCCC---------------HHHHHHHHHHhCC-EEEc
Confidence 667777888899999999998 88763 455665555322 21222 236777776 567 5555
Q ss_pred eeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 395 YQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 395 ~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
++...+...++++|+|++ +++++++..++.|+++.+.+
T Consensus 340 pg~~f~~~~~~~iRis~~----~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 340 PGSVFGESGEGFIRCSYA----TSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred CchhhCcCCCCeEEEEeC----CCHHHHHHHHHHHHHHHhhc
Confidence 543333222489999994 26889999999998877643
No 111
>PRK07324 transaminase; Validated
Probab=99.75 E-value=8.4e-16 Score=156.25 Aligned_cols=155 Identities=11% Similarity=0.064 Sum_probs=114.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC--CCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER--GQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~--g~id~e 81 (448)
.+++|+|+++++.+++.+... +++.|+++...|.++...++..|. +++.+|.+++ +.+|++
T Consensus 82 ~vi~t~G~~~al~~~~~~l~~--------------~gd~Vl~~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~ 144 (373)
T PRK07324 82 NILQTNGATGANFLVLYALVE--------------PGDHVISVYPTYQQLYDIPESLGA---EVDYWQLKEENGWLPDLD 144 (373)
T ss_pred hEEEcCChHHHHHHHHHHhCC--------------CCCEEEEcCCCchhHHHHHHHcCC---EEEEEecccccCCCCCHH
Confidence 468999999999888876543 567788899999999999999998 7888988653 468999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
++++.+.+ ++++|++++++|+||.+.+ +++|+++|++||+++++|++|....... ....... ...-.+.
T Consensus 145 ~l~~~~~~------~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~-~~~s~~~-~~~~~I~ 216 (373)
T PRK07324 145 ELRRLVRP------NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG-STPSIAD-LYEKGIS 216 (373)
T ss_pred HHHHhCCC------CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC-CCCChhh-ccCCEEE
Confidence 99887743 5789999999999999888 8999999999999999999986533211 0111011 1111255
Q ss_pred EECCccccCCCC-ceEEEEEeccchhh
Q psy14299 159 SWNPHKMLGAPL-QCSILLIKEKGLLH 184 (448)
Q Consensus 159 ~~s~hK~l~~P~-g~G~l~vr~~~~~~ 184 (448)
+.++.|.++.|. -+|.++. ++.++.
T Consensus 217 ~~s~SK~~~~~G~RiG~i~~-~~~li~ 242 (373)
T PRK07324 217 TNSMSKTYSLPGIRVGWIAA-NEEVID 242 (373)
T ss_pred EecchhhcCCccceeEEEec-CHHHHH
Confidence 668999887552 3577766 444443
No 112
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.75 E-value=1e-16 Score=171.31 Aligned_cols=154 Identities=18% Similarity=0.188 Sum_probs=120.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-----CCc
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-----GQM 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-----g~i 78 (448)
+-+.|+|+|.+|..++.++.. +++.|+++++.|.|+..++.+.|+ ..+++++..+ +.+
T Consensus 213 tyfvvNGTS~~n~av~~a~~~--------------~Gd~VLvdRN~HKSv~haLilsga---~PVYl~P~rn~~Gi~g~I 275 (714)
T PRK15400 213 SYMVTNGTSTANKIVGMYSAP--------------AGSTVLIDRNCHKSLTHLMMMSDV---TPIYFRPTRNAYGILGGI 275 (714)
T ss_pred EEEEeCchHHHHHHHHHHhcC--------------CCCEEEeecccHHHHHHHHHHcCC---eEEEecccccccCCccCC
Confidence 346677777889888877655 678899999999999999999999 6667765432 345
Q ss_pred C-----HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCC-
Q psy14299 79 I-----CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGI- 152 (448)
Q Consensus 79 d-----~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~- 152 (448)
+ ++.+++.|++..+. ++|+.++++.+++ .|.+.++++|.++|+.++ +|||.|||++..+.+.++.. ..+
T Consensus 276 ~~~~~~~e~i~~~i~~~p~a-k~p~~~vit~pTY-dG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~-sam~ 350 (714)
T PRK15400 276 PQSEFQHATIAKRVKETPNA-TWPVHAVITNSTY-DGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGK-CGMS 350 (714)
T ss_pred CccccCHHHHHHHHHhCccc-cCccEEEEECCCC-ccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCc-Chhh
Confidence 6 89999999864322 3566888888866 999999999999999887 79999999988766644311 112
Q ss_pred CCc---c--EEEECCccccCCCCceEEEEEec
Q psy14299 153 NRA---N--SVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 153 ~~a---D--~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
.++ | +++.|.||.|.+..+++.+.++.
T Consensus 351 ~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg 382 (714)
T PRK15400 351 GGRVEGKVIYETQSTHKLLAAFSQASMIHVKG 382 (714)
T ss_pred cCCCCCCceEEEEchhhcccchhHHhHHHHcC
Confidence 234 5 99999999999999999988755
No 113
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.75 E-value=1.5e-16 Score=170.12 Aligned_cols=158 Identities=20% Similarity=0.160 Sum_probs=120.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH-HHHhCCCCCcEEEEecCCC-----CC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA-AHWLGIGMDNVIRVKTNER-----GQ 77 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~-~~~~g~~~~~v~~v~~~~~-----g~ 77 (448)
+-++|+|+|.+|..++++++. +++.|++++++|.|+..+ ..+.|+ ..+++++..+ |.
T Consensus 192 tyFlvNGTS~gn~a~i~a~~~--------------~Gd~VLvdRN~HKSv~hgaLiLsGa---~PVYl~P~~n~~Gi~g~ 254 (720)
T PRK13578 192 TYFVLNGTSASNKVVTNALLT--------------PGDLVLFDRNNHKSNHHGALIQAGA---TPVYLETARNPFGFIGG 254 (720)
T ss_pred eEEEeCChhHHHHHHHHHhcC--------------CCCEEEeecccHHHHHHHHHHHcCC---eEEEeeccccccCCcCC
Confidence 346777778889888887765 678899999999999996 788898 5666665432 35
Q ss_pred cCHHH-----HHHHHHHh-hh--cCCCc-EEEEEeccCCccccccCHHHHHHH-HHHcCCEEEEecccccccccccchhh
Q psy14299 78 MICSF-----LEQTIQTS-LA--EKKIP-LFVNATAGTTVLGAFDPLDEIATV-CEKYDLWMHVDACWGGSLIFSEKYSF 147 (448)
Q Consensus 78 id~e~-----Le~~l~~~-~~--~~~~~-~lVv~~~~~t~tG~~~~l~~I~~i-a~~~g~~l~VD~A~~~~~~~~~~~~~ 147 (448)
++++. ++++|++. .+ ..++| ++++++.+|+ .|.+.|+++|.++ +|.++ .+|||.|||++..+.+.++.
T Consensus 255 I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~ 332 (720)
T PRK13578 255 IDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMAD 332 (720)
T ss_pred CChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCC-cEEEeCcchhhhccCccccc
Confidence 66555 88888764 11 11234 7889998888 9999999999998 68888 99999999999876664221
Q ss_pred h--hcCCCCcc----EEEECCccccCCCCceEEEEEecc
Q psy14299 148 V--LKGINRAN----SVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 148 ~--~~~~~~aD----~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
. ...-.++| +++.|.||.|.+-.+++.+.+++.
T Consensus 333 ~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~ 371 (720)
T PRK13578 333 CSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDN 371 (720)
T ss_pred CChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCc
Confidence 1 00112578 999999999999999999998664
No 114
>KOG1360|consensus
Probab=99.74 E-value=1.6e-16 Score=154.28 Aligned_cols=262 Identities=18% Similarity=0.191 Sum_probs=192.4
Q ss_pred CCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHH
Q psy14299 39 PPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEI 118 (448)
Q Consensus 39 ~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I 118 (448)
|+-+|+.++..|.|++.+.+..+.. -....++ |+++|++.|+.. ....|++|.+..+.+++|.+.||++|
T Consensus 256 pgcei~SD~gNHASMI~GIrns~v~---K~IFrHN-----D~~hL~~lL~~~--~~svPKivAFEtVhSM~Gavcpleel 325 (570)
T KOG1360|consen 256 PGCEIFSDEGNHASMIQGIRNSRVP---KHIFRHN-----DLDHLEQLLQSS--PKSVPKIVAFETVHSMDGAVCPLEEL 325 (570)
T ss_pred CCcEEeccccchHHHHHHhhhcCCc---ceeeccC-----CHHHHHHHHHhC--CCCCCceEEEeeeeccCCCcCCHHHH
Confidence 7778999999999999999988883 4456777 999999999863 23479999999999999999999999
Q ss_pred HHHHHHcCCEEEEecccccccccc-----cchhhhhcCCCCccEEEECCccccCCCCceEEEEEeccchhhhhccCCccc
Q psy14299 119 ATVCEKYDLWMHVDACWGGSLIFS-----EKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATY 193 (448)
Q Consensus 119 ~~ia~~~g~~l~VD~A~~~~~~~~-----~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y 193 (448)
++++++||+..++|..|+.|.+-. .+.+. -+..+|+++....|.+|+ .|..+.....+.....+..+++
T Consensus 326 cDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdG---vm~kvDiIsGTLgKafGc---VGGYIAat~~LvDmiRSyAaGF 399 (570)
T KOG1360|consen 326 CDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDG---VMHKVDIISGTLGKAFGC---VGGYIAATRKLVDMIRSYAAGF 399 (570)
T ss_pred HHHHHHhCceeeeehhhhhccccCCCCCccccCC---cchhhhhcccchhhhccc---ccceehhhhhHHHHHHHhcCce
Confidence 999999999999999888776521 11111 123589999999999886 3444455556666777788888
Q ss_pred ccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhh
Q psy14299 194 LFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAAT 273 (448)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (448)
++..+.++.. +. |
T Consensus 400 IFTTSLPP~v-------------------l~---------G--------------------------------------- 412 (570)
T KOG1360|consen 400 IFTTSLPPMV-------------------LA---------G--------------------------------------- 412 (570)
T ss_pred EEecCCChHH-------------------HH---------h---------------------------------------
Confidence 8876522110 00 0
Q ss_pred hhhccccccccccCCCCCccccccchhhHHHHHHHH-HhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeE
Q psy14299 274 YLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWK-ARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNI 352 (448)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v 352 (448)
+..+.+ .+.+||.. .++..+++.+|+++.|.++ |+.++ +..+.++
T Consensus 413 ------------------------------AleaVr~lk~~eg~~-lR~~hqrnv~~~kq~l~~~-GiPVi--~~pSHIi 458 (570)
T KOG1360|consen 413 ------------------------------ALEAVRILKSEEGRV-LRRQHQRNVKYVKQLLMEL-GIPVI--PNPSHII 458 (570)
T ss_pred ------------------------------HHHHHHHHhhhhhHH-HHHHHHHHHHHHHHHHHHc-CCccc--CCCccee
Confidence 111112 12334432 3344567889999999998 99886 4567778
Q ss_pred EEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEE----eeecCCcccccEEEEEecCCCCCCHHHHHHHHHH
Q psy14299 353 CFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIG----YQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQ 428 (448)
Q Consensus 353 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~----~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~a 428 (448)
.+++-... .+.++.+.|+.+..+++. |+...|. ..+|+.+ .+.+|.+-++.|+++
T Consensus 459 Pv~vgda~----------------l~~~~sd~Li~~h~iYvQaINyPTV~rG~---E~LRiaP--TP~HT~~mm~~lv~~ 517 (570)
T KOG1360|consen 459 PVRVGDAA----------------LAKQASDILISKHNIYVQAINYPTVARGT---ERLRIAP--TPHHTPQMMNILVNA 517 (570)
T ss_pred eeeccCHH----------------HHHHHHHHHHHhcCeEEEeccCCcccccc---eeeecCC--CCCCCHHHHHHHHHH
Confidence 77653211 235788888887667664 5566776 8999999 699999999999999
Q ss_pred HHHHHHHhHH
Q psy14299 429 IELRGAEVDL 438 (448)
Q Consensus 429 l~~~~~~~~~ 438 (448)
|..++.+++.
T Consensus 518 l~~vw~~v~l 527 (570)
T KOG1360|consen 518 LLDVWNEVGL 527 (570)
T ss_pred HHHHHHHcCC
Confidence 9999998764
No 115
>PRK08363 alanine aminotransferase; Validated
Probab=99.74 E-value=1e-15 Score=156.97 Aligned_cols=149 Identities=11% Similarity=-0.017 Sum_probs=109.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEE-ecCC-CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRV-KTNE-RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v-~~~~-~g~id~e 81 (448)
..++|+|+|+++.+++.+... +++.|+++..+|..+...++..|. .++.+ +.++ ++.+|++
T Consensus 95 ~i~it~G~~~al~~~~~~~~~--------------~gd~Vl~~~p~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~ 157 (398)
T PRK08363 95 DVRVTAAVTEALQLIFGALLD--------------PGDEILIPGPSYPPYTGLVKFYGG---VPVEYRTIEEEGWQPDID 157 (398)
T ss_pred hEEEeCCHHHHHHHHHHHhCC--------------CCCEEEEcCCCCcchHHHHHHcCC---EEEEeccccccCCcCCHH
Confidence 368999999998888766533 667899999999999999998887 56666 4444 4578999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCc-c-
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRA-N- 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~a-D- 156 (448)
.+++.+.+ ++++|++++++|+||...+ +++|.++|+++|+++++|++|+...+..+. ..+..+... .
T Consensus 158 ~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~--~~~~~~~~~~~v 229 (398)
T PRK08363 158 DIRKKITE------KTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKH--VSPGSLTKDVPV 229 (398)
T ss_pred HHHhhCCc------ceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcc--cCHHHcCcCCcE
Confidence 99988854 4789999999999998877 889999999999999999998854331110 001111111 2
Q ss_pred EEEECCccccCCC-CceEEEEE
Q psy14299 157 SVSWNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 157 ~~~~s~hK~l~~P-~g~G~l~v 177 (448)
+++.|++|+++.| ..+|++++
T Consensus 230 i~~~SfSK~~~~~GlRiG~~~~ 251 (398)
T PRK08363 230 IVMNGLSKVYFATGWRLGYIYF 251 (398)
T ss_pred EEEecchhccCCccceEEEEEE
Confidence 4456899985544 56788776
No 116
>KOG1359|consensus
Probab=99.74 E-value=1.6e-16 Score=148.87 Aligned_cols=280 Identities=16% Similarity=0.183 Sum_probs=189.5
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLE 84 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le 84 (448)
.++.+++-.||+-++-+... |++.|+.++..|.|++++.++... .+.+|+-+++
T Consensus 130 ~ilypscfdANag~feail~--------------pedAvfSDeLNhASIIdGirLckr------------y~h~dv~~l~ 183 (417)
T KOG1359|consen 130 TILYPSCFDANAGAFEAILT--------------PEDAVFSDELNHASIIDGIRLCKR------------YRHVDVFDLE 183 (417)
T ss_pred eEEeccccccchHHHHHhcC--------------hhhhhhccccccchhhhhhHHHhh------------hccchhHHHH
Confidence 45566666666555444333 677899999999999999887653 2345778888
Q ss_pred HHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccch--hhhhcCCCCccEEEECC
Q psy14299 85 QTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKY--SFVLKGINRANSVSWNP 162 (448)
Q Consensus 85 ~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~--~~~~~~~~~aD~~~~s~ 162 (448)
..+.... ..+-++|+.....++.|.+.|+++|++++++||++++||.+|+.+++-.... ...+.-...+|.+..+.
T Consensus 184 ~~l~~a~--k~r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTL 261 (417)
T KOG1359|consen 184 HCLISAC--KMRLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTL 261 (417)
T ss_pred HHHHHhh--hheEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhh
Confidence 7776422 2357889999999999999999999999999999999999999887632110 11122234689999999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
.|.+++- .|.+....+.+.....+...+|+++.+.++... ..+...+...+.
T Consensus 262 gKAlGga--~GGyttgp~~li~llrqr~RpylFSnslppavV------------------------~~a~ka~dllm~-- 313 (417)
T KOG1359|consen 262 GKALGGA--SGGYTTGPKPLISLLRQRSRPYLFSNSLPPAVV------------------------GMAAKAYDLLMV-- 313 (417)
T ss_pred hhhhcCC--CCCCccCChhHHHHHHhcCCceeecCCCChhhh------------------------hhhHHHHHHHHh--
Confidence 9999853 344445566666666677889998765321100 000011111000
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 322 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 322 (448)
-.+...+
T Consensus 314 -------------------------------------------------------------------------s~~~i~~ 320 (417)
T KOG1359|consen 314 -------------------------------------------------------------------------SSKEIQS 320 (417)
T ss_pred -------------------------------------------------------------------------hHHHHHH
Confidence 0122334
Q ss_pred HHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEE---eeecC
Q psy14299 323 AVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIG---YQPLQ 399 (448)
Q Consensus 323 ~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~---~~~~~ 399 (448)
...+.++|++....- ||+|. . ...++..+.+- + .+.+..+.+.|++.|+.++. |.++.
T Consensus 321 ~~a~~qrfr~~me~a-GftIs-g-~~hPI~pv~lG-----d-----------a~lA~~~ad~lLk~Gi~Vigfs~PvVP~ 381 (417)
T KOG1359|consen 321 RQANTQRFREFMEAA-GFTIS-G-ASHPICPVMLG-----D-----------ARLASKMADELLKRGIYVIGFSYPVVPK 381 (417)
T ss_pred HHHHHHHHHHHHHhc-Cceec-C-CCCCccceecc-----c-----------HHHHHHHHHHHHhcCceEEeecCCcCCC
Confidence 455678888888875 99996 2 23455555321 1 12345788999999965554 45666
Q ss_pred CcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 400 HRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 400 g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
|+ ..+|+-+ +..+|+||||++++++.++.+...
T Consensus 382 gk---ariRVqi--SAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 382 GK---ARIRVQI--SAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred Cc---eEEEEEE--ehhcCHHHHHHHHHHHHHHHHhhc
Confidence 77 8999999 789999999999999999987643
No 117
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.74 E-value=2.2e-15 Score=154.88 Aligned_cols=150 Identities=12% Similarity=0.135 Sum_probs=112.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC-----CCCCc
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN-----ERGQM 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~-----~~g~i 78 (448)
..++|+|+++++..++.+... +++.|++....+..+...++..|. +++.++.+ .++.+
T Consensus 104 ~I~it~Ga~~al~~~~~~l~~--------------~Gd~Vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~~~~ 166 (405)
T PRK06207 104 ELIITPGTQGALFLAVAATVA--------------RGDKVAIVQPDYFANRKLVEFFEG---EMVPVQLDYLSADKRAGL 166 (405)
T ss_pred CEEEeCCcHHHHHHHHHHhcC--------------CCCEEEEeCCCchhHHHHHHHcCC---EEEEEeccccCcccCCCc
Confidence 578999999998877766543 677888899999999999999898 78888875 25789
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCC---
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGI--- 152 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~--- 152 (448)
|+++|++++++ ++++|++++++|+||.+.+ +++|+++|++||+++++|++|+-..+....... +..+
T Consensus 167 d~~~l~~~~~~------~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~-~~~~~~~ 239 (405)
T PRK06207 167 DLDQLEEAFKA------GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTH-LRALPID 239 (405)
T ss_pred CHHHHHHhhhh------cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCc-hhcCCCC
Confidence 99999999865 4779999999999999887 778899999999999999998864431111000 1001
Q ss_pred CCccEEEECCccccCCC-CceEEEEE
Q psy14299 153 NRANSVSWNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 153 ~~aD~~~~s~hK~l~~P-~g~G~l~v 177 (448)
..-=+++.|+.|.++.| .-+|+++.
T Consensus 240 ~~~vi~i~SfSK~~~lpGlRiG~ii~ 265 (405)
T PRK06207 240 PENVITIMGPSKTESLSGYRLGVAFG 265 (405)
T ss_pred cCcEEEEecchhhccCcccceEEEEc
Confidence 00115667889998866 12777654
No 118
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.74 E-value=4e-15 Score=154.02 Aligned_cols=151 Identities=11% Similarity=0.028 Sum_probs=110.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC--CCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN--ERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~--~~g~id~e 81 (448)
.+++|+|+|+++.+++.+... +++.|+++...+..+...+...|. +++.++.. .++.+|++
T Consensus 119 ~v~it~G~~~al~l~~~~l~~--------------~Gd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~~~~~~~~~~d~~ 181 (430)
T PLN00145 119 DIYLTAGCAQAIEIIMSVLAQ--------------PGANILLPRPGYPLYEARAVFSGL---EVRHFDLLPERGWEVDLE 181 (430)
T ss_pred hEEEeCCHHHHHHHHHHHhcC--------------CCCEEEEcCCCCccHHHHHHHcCC---EEEEeeCCcccCCcCCHH
Confidence 478999999998888776543 567799999999888888888888 67777653 35789999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhh--hcCCCCcc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFV--LKGINRAN 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~--~~~~~~aD 156 (448)
++++.+++ +++++++++++|+||.+.| +++|+++|++||+++++|++|....+........ +... .-=
T Consensus 182 ~l~~~~~~------~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~-~~v 254 (430)
T PLN00145 182 GVEALADE------NTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEV-APV 254 (430)
T ss_pred HHHHHhCc------CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhccc-CcE
Confidence 99988754 4789999999999999988 8889999999999999999987543311110000 1110 011
Q ss_pred EEEECCccccCCC-CceEEEEEe
Q psy14299 157 SVSWNPHKMLGAP-LQCSILLIK 178 (448)
Q Consensus 157 ~~~~s~hK~l~~P-~g~G~l~vr 178 (448)
+++.|..|.++.| .-+|+++..
T Consensus 255 i~~~S~SK~~~~pG~RlG~iv~~ 277 (430)
T PLN00145 255 LTLGSISKRWVVPGWRLGWIATC 277 (430)
T ss_pred EEEeccccccCCCCeeEEEEEEe
Confidence 4556788875554 446666553
No 119
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.73 E-value=1.1e-15 Score=154.40 Aligned_cols=147 Identities=12% Similarity=0.003 Sum_probs=105.7
Q ss_pred EEE-eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 5 PFL-LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 5 g~~-t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.++ |+|+++++..++.+..+ +++.|+++...+..+...++..|. +++.++.+.++.+|++++
T Consensus 89 i~~~~~Ga~~~i~~~~~~~~~--------------~gd~vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~l 151 (361)
T PRK00950 89 IIVGGDGMDEVIDTLMRTFID--------------PGDEVIIPTPTFSYYEISAKAHGA---KPVYAKREEDFSLDVDSV 151 (361)
T ss_pred EEEeCCCHHHHHHHHHHHhcC--------------CCCEEEEcCCChHHHHHHHHHcCC---EEEEeecCCCCCcCHHHH
Confidence 456 56667776666554332 566788888777777777888888 788898777779999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++.+.+ ++++|++++++|+||.+.|.+++.++|+++|+++++|++|+... . ........... --++..++.
T Consensus 152 ~~~~~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~-~-~~~~~~~~~~~-~vi~~~S~S 222 (361)
T PRK00950 152 LNAITE------KTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFA-E-YDYTPLALEYD-NLIIGRTFS 222 (361)
T ss_pred HHHhcc------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhC-c-cchHHHHHhcC-CEEEEEeeh
Confidence 998853 46788889999999999999999999999999999999997443 1 11111111111 114556889
Q ss_pred cccCCCC-ceEEEEE
Q psy14299 164 KMLGAPL-QCSILLI 177 (448)
Q Consensus 164 K~l~~P~-g~G~l~v 177 (448)
|.++.|. -+|+++.
T Consensus 223 K~~g~~GlRiG~~~~ 237 (361)
T PRK00950 223 KVFGLAGLRIGYGFV 237 (361)
T ss_pred HhhcCchhhcchhcC
Confidence 9887553 3566554
No 120
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.73 E-value=8.3e-16 Score=151.40 Aligned_cols=314 Identities=16% Similarity=0.126 Sum_probs=197.7
Q ss_pred eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHH
Q psy14299 8 LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTI 87 (448)
Q Consensus 8 t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l 87 (448)
-+.|+.+-..+++..|.+. ..+|- ..+.++++++.+|-.+-.++.+.|+ +|+.|+++++|.+|+++|++.+
T Consensus 131 P~AGAqGE~aGll~Ir~YH----e~rG~--~~R~~~LIP~SAHGTNPASAam~G~---~VV~V~~~~~G~VDlddLk~k~ 201 (496)
T COG1003 131 PNAGAQGEYAGLLAIRAYH----ESRGE--GHRNICLIPDSAHGTNPASAAMAGF---KVVVVKCDENGNVDLDDLRAKA 201 (496)
T ss_pred CCCCcchhhHHHHHHHHHH----HHcCC--CcCcEEEeeccccCCChhhHhhcCc---eEEEEecCCCCCccHHHHHHHh
Confidence 3456666666666555542 12232 2667899999999999999999999 8999999999999999999999
Q ss_pred HHhhhcCCCcEEEEEeccCCccccc-cCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCcccc
Q psy14299 88 QTSLAEKKIPLFVNATAGTTVLGAF-DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPHKML 166 (448)
Q Consensus 88 ~~~~~~~~~~~lVv~~~~~t~tG~~-~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l 166 (448)
.+ ++..+++|.++| .|++ .+|.+|+++.|++|..+..|||---..+-.- + .|.-++|++-++.||++
T Consensus 202 ~~------~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~--r---PGd~G~DV~HlNLHKTF 269 (496)
T COG1003 202 ED------NLAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLA--R---PGDMGFDVVHLNLHKTF 269 (496)
T ss_pred cc------ceeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhccc--c---ccccccceEEeeccccc
Confidence 75 577899999998 8877 6799999999999999999997542222100 0 12225899999999998
Q ss_pred CCCCc-----eEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 167 GAPLQ-----CSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 167 ~~P~g-----~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
..|-| .|.+.++.. +...++....| .... .+....+.. +++--++.+ +|..+
T Consensus 270 ~iPHGGGGPG~GPvgVk~~--L~pfLP~p~~~-~~~~-~y~~~~~~~-~s~g~~~a~-----------~Gs~~------- 326 (496)
T COG1003 270 CIPHGGGGPGAGPVGVKAH--LAPFLPGPVVY-HDVG-EYRLDYDGK-KSIGVSAAP-----------YGSAS------- 326 (496)
T ss_pred ccCCCCCCCCCCceehHhh--ccccCCCCccc-CCCc-cccccCCCC-ccceeeccc-----------cCcch-------
Confidence 77754 445556432 22222211011 0000 000000000 000000000 01000
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
-....|..++..|.+|++..-+
T Consensus 327 ----------------------------------------------------------il~~a~~YI~~mG~~GL~~ase 348 (496)
T COG1003 327 ----------------------------------------------------------ILPIAWAYIRMMGADGLKQASE 348 (496)
T ss_pred ----------------------------------------------------------HHHHHHHHHHHHhHHHHHHHHH
Confidence 1223445555666666667777
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCC--ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecC
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEF--QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQ 399 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~ 399 (448)
...-+++|+..+|+. .++++..+. ....+++...| +.+..+.....+.++|++.| ++. |+...
T Consensus 349 ~AvLNANYia~rL~~--~y~~~y~~~~~~~HE~ild~r~-----------l~~~~Gv~~~DvAKrLlD~G-fHa-PT~~F 413 (496)
T COG1003 349 VAVLNANYIARRLKG--YYPVPYTGENRVAHECILDARP-----------LKKETGVRALDVAKRLLDYG-FHA-PTMYF 413 (496)
T ss_pred HHHHhHHHHHHHhhh--cCccccCCCCcceeEEEeechH-----------hHhhcCCcHHHHHHHHHhcC-CCC-CcccC
Confidence 778889999999997 466642222 35666665442 11223334558999999999 332 23221
Q ss_pred CcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHHhh
Q psy14299 400 HRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDLEM 440 (448)
Q Consensus 400 g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~~~ 440 (448)
--.-.+.+=|=+ ...-+++++|++++++.++.++.....
T Consensus 414 PliV~~tLMIEP--TEsEsk~eLDrf~dami~I~~Ea~~~~ 452 (496)
T COG1003 414 PLIVAGTLMIEP--TESESKEELDRFIDAMIAIREEADAVP 452 (496)
T ss_pred ccccccceeecC--CCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 100025677777 467889999999999999998876543
No 121
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.73 E-value=1.9e-15 Score=157.11 Aligned_cols=160 Identities=14% Similarity=0.159 Sum_probs=114.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCch-HHHHHHHHhCCCCCcEEEEecCC--------
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHY-SMLKAAHWLGIGMDNVIRVKTNE-------- 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~-s~~~~~~~~g~~~~~v~~v~~~~-------- 74 (448)
.+++|+|||+|+.+++.+..+ |++ |+++.. |+ +......+.|. +++.+++++
T Consensus 95 ~vv~t~ggt~A~~~~~~all~--------------pGD-Vii~~p-~~~~~~~~i~~~G~---~~v~v~~~~~~~~~~~~ 155 (460)
T PRK13238 95 YTIPTHQGRAAEQILFPVLIK--------------KGD-VVPSNY-HFDTTRAHIELNGA---TAVDLVIDEALDTGSRH 155 (460)
T ss_pred cEEECCCHHHHHHHHHHHhCC--------------CCC-EEccCC-cccchHHHHHHcCC---EEEEEeccccccccccc
Confidence 478999999999988766543 566 666655 55 44455667787 677888753
Q ss_pred --CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc-cc---cCHHHHHHHHHHcCCEEEEecccccc-cccccc---
Q psy14299 75 --RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG-AF---DPLDEIATVCEKYDLWMHVDACWGGS-LIFSEK--- 144 (448)
Q Consensus 75 --~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG-~~---~~l~~I~~ia~~~g~~l~VD~A~~~~-~~~~~~--- 144 (448)
.|.+|+++|++.+.+. ...++++|++++++|++| .. .++++|.++|++||++++.|+|+... .++...
T Consensus 156 ~f~g~id~e~Le~~i~~~--~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~ 233 (460)
T PRK13238 156 PFKGNFDLEKLEALIEEV--GAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREP 233 (460)
T ss_pred cccCCcCHHHHHHHHhhc--CCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccc
Confidence 2459999999999752 113588999999999998 44 55789999999999999999988553 222110
Q ss_pred --hhhhhcC-----CCCccEEEECCccccCCCCceEEEEEeccchhhh
Q psy14299 145 --YSFVLKG-----INRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQ 185 (448)
Q Consensus 145 --~~~~~~~-----~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~ 185 (448)
....+.. .+.+|++++|+||.+.+|.| |+++.++.++...
T Consensus 234 g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~~~ 280 (460)
T PRK13238 234 GYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLFTE 280 (460)
T ss_pred cccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEEEcChHHHHHH
Confidence 0000110 13589999999999999986 8877776555444
No 122
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.73 E-value=1.8e-15 Score=155.25 Aligned_cols=156 Identities=8% Similarity=0.019 Sum_probs=114.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC--CCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER--GQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~--g~id~e 81 (448)
..++|+|+++++.+++.+... +++.|+++...|..+...++..|. +++.+|.+++ +.+|++
T Consensus 95 ~I~it~G~~~al~~~~~~~~~--------------~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~ 157 (399)
T PRK07681 95 EVLLLMGSQDGLVHLPMVYAN--------------PGDIILVPDPGYTAYETGIQMAGA---TSYYMPLKKENDFLPDLE 157 (399)
T ss_pred eEEECCCcHHHHHHHHHHhCC--------------CCCEEEECCCCccchHHHHHhcCC---EEEEEecCCCCCCcCCHH
Confidence 478899999998776655443 567899999999999999999998 7889998754 467999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhh--hcCCCCcc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFV--LKGINRAN 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~--~~~~~~aD 156 (448)
++++.+.+ ++++|++++++|+||.+.+ +++|.++|++||+++++|.+|+-........... +.+.....
T Consensus 158 ~l~~~~~~------~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~ 231 (399)
T PRK07681 158 LIPEEIAD------KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVG 231 (399)
T ss_pred HHHHhccc------cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccE
Confidence 99888853 4789999999999999877 7888999999999999999988554321110010 11111123
Q ss_pred EEEECCccccCCC-CceEEEEEeccchh
Q psy14299 157 SVSWNPHKMLGAP-LQCSILLIKEKGLL 183 (448)
Q Consensus 157 ~~~~s~hK~l~~P-~g~G~l~vr~~~~~ 183 (448)
++..|+.|.++.| .-+|+++. ++++.
T Consensus 232 i~~~S~SK~~~~~GlRiG~~i~-~~~l~ 258 (399)
T PRK07681 232 VEINSLSKSYSLAGSRIGYMIG-NEEIV 258 (399)
T ss_pred EEEeecccccCCccceeEEEec-CHHHH
Confidence 6667899988644 23777765 44443
No 123
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.73 E-value=2.1e-15 Score=151.97 Aligned_cols=152 Identities=12% Similarity=0.013 Sum_probs=111.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|+++++..++.+...+ | .+++.|+++...+..+...++..|. +++.++.++ +..+|++
T Consensus 62 ~Iiit~Gs~~ai~~~~~~~~~~--------g---~~~d~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~ 127 (350)
T TIGR03537 62 QVLPSAGSKEAIFHFPLVFIDP--------E---EDRRRVIFGTPGYPVYERGALFAGG---EPTAVKLKKEDGFLLRLE 127 (350)
T ss_pred cEEEcCChHHHHHHHHHHHcCC--------C---CCCceEEEcCCCCcchHHHHHhcCC---EEEEcccCcccCCccCHH
Confidence 5889999999987777655442 1 1235799999999999999999999 788998863 3468999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCC-CccE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGIN-RANS 157 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~-~aD~ 157 (448)
++++++.+ +++++++++++|+||...| +++|.++|++||+++++|++|+-.....+. ....... .-.+
T Consensus 128 ~l~~~~~~------~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~--~~~~~~~~~~~i 199 (350)
T TIGR03537 128 KVEKSILE------ETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPP--HSALEVGIENVL 199 (350)
T ss_pred HHHHhhhh------ccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCC--CchhhcCcCCEE
Confidence 99998865 4789999999999998888 899999999999999999998754321111 0011111 1125
Q ss_pred EEECCccccCCCC-ceEEEEE
Q psy14299 158 VSWNPHKMLGAPL-QCSILLI 177 (448)
Q Consensus 158 ~~~s~hK~l~~P~-g~G~l~v 177 (448)
++.|++|.++.|. -+|+++.
T Consensus 200 ~~~s~SK~~g~~GlRiG~~~~ 220 (350)
T TIGR03537 200 AFHSLSKRSGMTGYRSGFVAG 220 (350)
T ss_pred EEeecccccCCccccceeeec
Confidence 5568999887653 2555543
No 124
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.73 E-value=3.2e-15 Score=150.68 Aligned_cols=149 Identities=15% Similarity=0.027 Sum_probs=111.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++..++.+... +++.|+++...+..+...++..|. +++.++.++++.+|++++
T Consensus 78 ~i~it~G~~~~l~~~~~~l~~--------------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l 140 (351)
T PRK14807 78 NIFVGNGSDEIIHLIMLAFIN--------------KGDVVIYPHPSFAMYSVYSKIAGA---VEIPVKLKEDYTYDVGSF 140 (351)
T ss_pred cEEEecCHHHHHHHHHHHhcC--------------CCCEEEEeCCChHHHHHHHHHcCC---eEEEeecCCCCCCCHHHH
Confidence 467899999987777665433 567788888888888888888888 788999887889999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++++++ .++++|++++++|+||...+.+++.+++++++.++++|++|+... ........... .--+++.|+.
T Consensus 141 ~~~~~~-----~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~--~~~~~~~~~~~-~~vi~~~S~S 212 (351)
T PRK14807 141 IKVIEK-----YQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFY--GNTIVDVINEF-ENLIVLRTLS 212 (351)
T ss_pred HHHhhc-----cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhc--ccchHHHhhhC-CCEEEEecch
Confidence 999864 257899999999999999999999999999999999999996431 11111111111 1236667889
Q ss_pred cccCCC-CceEEEEE
Q psy14299 164 KMLGAP-LQCSILLI 177 (448)
Q Consensus 164 K~l~~P-~g~G~l~v 177 (448)
|.++.| .-+|+++.
T Consensus 213 K~~~~~GlRiG~~v~ 227 (351)
T PRK14807 213 KAFGLAGLRVGYAVA 227 (351)
T ss_pred Hhcccchhceeeeec
Confidence 998744 34566554
No 125
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.73 E-value=4.7e-15 Score=155.76 Aligned_cols=120 Identities=15% Similarity=0.104 Sum_probs=100.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|+++++.+++.+.... +++.|+++...+..+...++..|. +++.++.++ ++.+|++
T Consensus 140 ~I~it~Ga~~al~~~~~~l~~~-------------~gD~Vlv~~P~y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~ 203 (481)
T PTZ00377 140 DIFLTDGASSGIKLLLQLLIGD-------------PSDGVMIPIPQYPLYSAAITLLGG---KQVPYYLDEEKGWSLDQE 203 (481)
T ss_pred hEEEcCCHHHHHHHHHHHhccC-------------CCCEEEECCCCchhHHHHHHHcCC---EEEEEEeccccCCCCCHH
Confidence 4789999999988887766532 677899999999999999999998 788888864 3589999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEeccccccc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSL 139 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~ 139 (448)
+|++++.+..+++.+++++++++++|+||.+.+ +++|+++|++||+++++|.+|.-..
T Consensus 204 ~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~ 264 (481)
T PTZ00377 204 ELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENI 264 (481)
T ss_pred HHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhc
Confidence 999999764444446888889999999999988 8889999999999999999987543
No 126
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.73 E-value=9e-16 Score=155.80 Aligned_cols=144 Identities=15% Similarity=0.125 Sum_probs=112.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH----HHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA----AHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~----~~~~g~~~~~v~~v~~~~~g~id 79 (448)
.++++++|++||..++.+... +++.|+++...|.+.... ++..|+ ++..++.+ |
T Consensus 57 ~a~~~~sG~~Ai~~~l~~l~~--------------~gd~Vl~~~~~y~~~~~~~~~~~~~~g~---~~~~v~~~-----d 114 (369)
T cd00614 57 AALAFSSGMAAISTVLLALLK--------------AGDHVVASDDLYGGTYRLFERLLPKLGI---EVTFVDPD-----D 114 (369)
T ss_pred CEEEEcCHHHHHHHHHHHHcC--------------CCCEEEECCCCcchHHHHHHHHHhhcCe---EEEEeCCC-----C
Confidence 578899999999998877644 566788898888876543 344565 67777765 6
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++.+++|++|.+.|+++|+++||+||++++||++++.+....+ . .. ++|+++
T Consensus 115 ~~~l~~~i~~------~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~~~-~-----~~-g~Divv 181 (369)
T cd00614 115 PEALEAAIKP------ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQRP-L-----EL-GADIVV 181 (369)
T ss_pred HHHHHHhcCC------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcCCh-h-----hh-CCcEEE
Confidence 8999988854 578999999999999999999999999999999999999987654211 1 11 479999
Q ss_pred ECCccccCCCCc--eEEEEEeccch
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKEKGL 182 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~~~~ 182 (448)
.|.+|++++|.. .|+++.+++++
T Consensus 182 ~S~tK~l~g~~~~~gG~v~~~~~~l 206 (369)
T cd00614 182 HSATKYIGGHSDVIAGVVVGSGEAL 206 (369)
T ss_pred eccceeccCCCCceEEEEEeCcHHH
Confidence 999999998753 56666655343
No 127
>PRK05968 hypothetical protein; Provisional
Probab=99.72 E-value=8.3e-16 Score=157.03 Aligned_cols=144 Identities=10% Similarity=0.079 Sum_probs=108.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH----HHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML----KAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~----~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++|++|+..++.+... +++.|+++...|.+.. ..+...|+ ++..++.+ |
T Consensus 80 ~av~~~sG~~Ai~~al~al~~--------------~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~---~v~~vd~~-----d 137 (389)
T PRK05968 80 DARGFASGMAAISSTVLSFVE--------------PGDRIVAVRHVYPDAFRLFETILKRMGV---EVDYVDGR-----D 137 (389)
T ss_pred cEEEECCHHHHHHHHHHHHhC--------------CCCEEEEeCCCchHHHHHHHHHHHHcCc---eEEEeCCC-----C
Confidence 457788999998888765433 6677888888887643 45555677 67777654 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++. ++++|.+.+++++++.+.|+++|+++||+||++++||++++.+....+ . . .++|+++
T Consensus 138 ~~~l~~~i~-------~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p-~---~---~g~Divv 203 (389)
T PRK05968 138 EEAVAKALP-------GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRP-I---T---LGVDLVI 203 (389)
T ss_pred HHHHHHhcc-------cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCc-h---h---cCCcEEE
Confidence 899998872 367999999999999999999999999999999999999987653211 1 1 1479999
Q ss_pred ECCccccCCCCc--eEEEEEeccchhh
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKEKGLLH 184 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~~~~~~ 184 (448)
.|++|++++|.+ .|+++. ++++..
T Consensus 204 ~S~tK~l~g~~~~~gG~i~~-~~~~~~ 229 (389)
T PRK05968 204 HSASKYLGGHSDTVAGVVAG-SKEHIA 229 (389)
T ss_pred eeccccccCCCCeEEEEEEE-CHHHHH
Confidence 999999999876 565554 444433
No 128
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.72 E-value=1.2e-15 Score=155.52 Aligned_cols=151 Identities=14% Similarity=0.123 Sum_probs=114.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-CCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-GQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-g~id~e~ 82 (448)
.+++|+|||+|+.+++.+..- .+++.|+++..+|.+...++...|+ +++.++.+++ +.+|+++
T Consensus 50 ~~v~~~sgt~al~lal~al~~-------------~~Gd~Viv~~~~~~~~~~~~~~~G~---~~v~vd~~~~~~~~d~~~ 113 (379)
T PRK11658 50 HAIAVSSATAGMHITLMALGI-------------GPGDEVITPSLTWVSTLNMIVLLGA---TPVMVDVDRDTLMVTPEA 113 (379)
T ss_pred eEEEECCHHHHHHHHHHHcCC-------------CCCCEEEECCCcHHHHHHHHHHcCC---EEEEEecCCCcCCcCHHH
Confidence 468899999998888766421 2677899999999999999988888 7889998765 4799999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
+++++.+ ++++|+.++ ++|...|+++|.++|++||+++++|+||+.+....... +... ..++++++.
T Consensus 114 l~~~i~~------~tkav~~~~---~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~---~g~~-g~~~~Sf~~ 180 (379)
T PRK11658 114 IEAAITP------RTKAIIPVH---YAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRH---IGAR-GTAIFSFHA 180 (379)
T ss_pred HHHhccc------CCeEEEEeC---CCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCee---cCCC-CCEEEeCCC
Confidence 9999864 477877555 48999999999999999999999999999776543211 1112 347888899
Q ss_pred ccccCCCCceEEEEEeccchhh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLH 184 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~ 184 (448)
+|++.++. .|+++.+++++..
T Consensus 181 ~K~l~~g~-GG~v~~~~~~~~~ 201 (379)
T PRK11658 181 IKNITCAE-GGLVVTDDDELAD 201 (379)
T ss_pred CCcCcccC-ceEEEECCHHHHH
Confidence 99987643 3444444455433
No 129
>PRK09265 aminotransferase AlaT; Validated
Probab=99.72 E-value=4.9e-15 Score=152.23 Aligned_cols=150 Identities=11% Similarity=-0.020 Sum_probs=109.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|+++++.+++.+... +++.|+++..+|..+...++..|. +++.++.+. ++.+|++
T Consensus 97 ~i~~t~G~~~~l~~~~~~~~~--------------~gd~Vlv~~p~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~ 159 (404)
T PRK09265 97 DIYIGNGVSELIVMAMQALLN--------------NGDEVLVPAPDYPLWTAAVSLSGG---KPVHYLCDEEAGWFPDLD 159 (404)
T ss_pred cEEEeCChHHHHHHHHHHhCC--------------CCCEEEEeCCCCcChHHHHHHcCC---EEEEEecccccCCCCCHH
Confidence 467899999988777765433 567788999999999999988887 677777653 4579999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCC-CCccE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGI-NRANS 157 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~-~~aD~ 157 (448)
++++.+.+ ++++|++++++|+||.+.+ +++|.++|++||+++++|.+|............ +..+ ....+
T Consensus 160 ~l~~~~~~------~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~v 232 (404)
T PRK09265 160 DIRSKITP------RTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHIS-IASLAPDLLC 232 (404)
T ss_pred HHHHhccc------cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCC-HHHcCCCceE
Confidence 99998854 4789999999999999988 899999999999999999998754321111000 1111 11224
Q ss_pred E-EECCccccCCCC-ceEEEEE
Q psy14299 158 V-SWNPHKMLGAPL-QCSILLI 177 (448)
Q Consensus 158 ~-~~s~hK~l~~P~-g~G~l~v 177 (448)
+ ..|+.|.++.|. -+|+++.
T Consensus 233 i~~~S~SK~~~~pGlRiG~~v~ 254 (404)
T PRK09265 233 VTFNGLSKAYRVAGFRVGWMVL 254 (404)
T ss_pred EEEecchhhccCcccceEEEEE
Confidence 4 456789987663 2677665
No 130
>PRK09082 methionine aminotransferase; Validated
Probab=99.72 E-value=9e-16 Score=156.72 Aligned_cols=151 Identities=10% Similarity=0.000 Sum_probs=112.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e~ 82 (448)
..++|+|+|+++..++..... +++.|+++...|.++...++..|. ++..++.++ ++.+|+++
T Consensus 93 ~i~~t~G~~~al~~~~~~~~~--------------~gd~Vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~d~~~ 155 (386)
T PRK09082 93 EITVTAGATEALFAAILALVR--------------PGDEVIVFDPSYDSYAPAIELAGG---RAVRVALQPPDFRVDWQR 155 (386)
T ss_pred cEEEeCCHHHHHHHHHHHHcC--------------CCCEEEEeCCCchhhHHHHHHcCC---EEEEEecCcccccCCHHH
Confidence 488999999998888766543 567799999999999999999888 788999863 57899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHcCCEEEEecccccccccccchhh--hhcCCCCccE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF--VLKGINRANS 157 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~--~~~~~~~aD~ 157 (448)
+++.+++ ++++|++++++|+||.. .++++|.++|++||+++++|.+|+...+....... ...+...-.+
T Consensus 156 l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i 229 (386)
T PRK09082 156 FAAAISP------RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAF 229 (386)
T ss_pred HHHhcCc------cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEE
Confidence 9998854 47889999999999976 67899999999999999999998754432111000 0111112346
Q ss_pred EEECCccccCCCC-ceEEEEE
Q psy14299 158 VSWNPHKMLGAPL-QCSILLI 177 (448)
Q Consensus 158 ~~~s~hK~l~~P~-g~G~l~v 177 (448)
+..|+.|.++.|. -+|+++.
T Consensus 230 ~~~S~SK~~~~~G~RiG~iv~ 250 (386)
T PRK09082 230 VVSSFGKTYHVTGWKVGYCVA 250 (386)
T ss_pred EEeechhhccchhhhhhhhhC
Confidence 6678888876553 3455554
No 131
>PRK07550 hypothetical protein; Provisional
Probab=99.72 E-value=3.2e-15 Score=152.57 Aligned_cols=153 Identities=8% Similarity=-0.026 Sum_probs=111.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|+++++.+++.+... +++.|+++...+......++..|+ +++.++.++ ++.+|++
T Consensus 92 ~i~~t~G~~~al~~~~~~l~~--------------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~ 154 (386)
T PRK07550 92 QVHITSGCNQAFWAAMVTLAG--------------AGDEVILPLPWYFNHKMWLDMLGI---RPVYLPCDEGPGLLPDPA 154 (386)
T ss_pred eEEEecCcHHHHHHHHHHhcC--------------CCCEEEEcCCCCcchHHHHHhcCC---EEEEEecCCCcCCCCCHH
Confidence 468899989998777666543 567799998888888888888888 788999864 4568999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcC--CCCcc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKG--INRAN 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~--~~~aD 156 (448)
++++++++ ++++|++++++|+||...+ +++|+++|++||+++++|++|+............... ...-.
T Consensus 155 ~l~~~~~~------~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~ 228 (386)
T PRK07550 155 AAEALITP------RTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTL 228 (386)
T ss_pred HHHHHhcc------cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccE
Confidence 99999965 4778888899999998876 7899999999999999999987542211000001110 01112
Q ss_pred EEEECCccccCCC-CceEEEEEec
Q psy14299 157 SVSWNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 157 ~~~~s~hK~l~~P-~g~G~l~vr~ 179 (448)
+++.|++|.++.| ..+|+++..+
T Consensus 229 i~~~S~SK~~g~~G~RiG~i~~~~ 252 (386)
T PRK07550 229 VHLYSFSKSYALTGHRVGAVVASP 252 (386)
T ss_pred EEEecchhhccCcccceEeeecCH
Confidence 5578999998755 3477776643
No 132
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=4.3e-15 Score=153.38 Aligned_cols=140 Identities=13% Similarity=0.039 Sum_probs=112.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH----HhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH----WLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~----~~g~~~~~v~~v~~~~~g~id 79 (448)
..++|++||.|+.+++..... +++.|+++...|.+...... ..|+ +++.++.+ |
T Consensus 81 ~av~~sSGt~Al~~al~~ll~--------------~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi---~v~~vd~~-----d 138 (433)
T PRK08134 81 GAIATASGQAALHLAIATLMG--------------AGSHIVASSALYGGSHNLLHYTLRRFGI---ETTFVKPG-----D 138 (433)
T ss_pred cEEEeCCHHHHHHHHHHHHhC--------------CCCEEEEeCCccHHHHHHHHHHHhhCCe---EEEEECCC-----C
Confidence 468999999999888766532 56789999999987655543 3466 67777764 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+++++++|++ ++++|+++++++++|.+.|+++|+++||+||++++||++|+.+....+. .+ ++|+++
T Consensus 139 ~~~l~~~i~~------~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl------~~-GaD~vv 205 (433)
T PRK08134 139 IDGWRAAIRP------NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPF------EH-GADLVY 205 (433)
T ss_pred HHHHHHhcCC------CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCCch------hc-CCCEEE
Confidence 9999999965 5899999999999999999999999999999999999999887763321 11 589999
Q ss_pred ECCccccCCCCc-eEEEEEe
Q psy14299 160 WNPHKMLGAPLQ-CSILLIK 178 (448)
Q Consensus 160 ~s~hK~l~~P~g-~G~l~vr 178 (448)
+|+|||+++|.. .|.+++.
T Consensus 206 ~S~tK~l~g~g~~~gG~v~~ 225 (433)
T PRK08134 206 HSATKFLGGHGTAIGGVLVD 225 (433)
T ss_pred eccccccCCCCCceEEEEEe
Confidence 999999987753 5556554
No 133
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.71 E-value=3.1e-15 Score=151.96 Aligned_cols=141 Identities=11% Similarity=0.065 Sum_probs=112.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~id 79 (448)
.++++++|+.|+..++....+ +++.|+++...|......+ +..|+ ++..++.. |
T Consensus 79 ~a~~~~SGmaAi~~~~~~ll~--------------~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi---~v~~vd~~-----d 136 (395)
T PRK08114 79 GCALYPCGAAAVANAILAFVE--------------QGDHVLMTGTAYEPTQDFCSKILSKLGV---TTTWFDPL-----I 136 (395)
T ss_pred eEEEEhHHHHHHHHHHHHHcC--------------CCCEEEEeCCCcHHHHHHHHHHHHhcCc---EEEEECCC-----C
Confidence 578889999998887765533 6678889888988777665 33466 67777753 7
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcC--CEEEEecccccccccccchhhhhcCCCCccE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYD--LWMHVDACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g--~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
+++++++|++ ++++|.+.+++|++|.+.||++|+++||++| ++++||++++.+.. .+.... ++|+
T Consensus 137 ~~~l~~~l~~------~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~pl~~------GaDi 203 (395)
T PRK08114 137 GADIAKLIQP------NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKALDF------GIDI 203 (395)
T ss_pred HHHHHHhcCC------CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-cCHHHc------CCcE
Confidence 8999999864 5899999999999999999999999999985 99999999998766 333221 5899
Q ss_pred EEECCccccCCCC--ceEEEEEec
Q psy14299 158 VSWNPHKMLGAPL--QCSILLIKE 179 (448)
Q Consensus 158 ~~~s~hK~l~~P~--g~G~l~vr~ 179 (448)
++.|.|||+++|. +.|+++.++
T Consensus 204 vv~S~tKyl~Ghsdv~~G~v~~~~ 227 (395)
T PRK08114 204 SIQAGTKYLVGHSDAMIGTAVANA 227 (395)
T ss_pred EEEcCcccccCCCcceeEEEEcCH
Confidence 9999999999996 677665443
No 134
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.71 E-value=5.9e-15 Score=151.25 Aligned_cols=151 Identities=17% Similarity=0.098 Sum_probs=103.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.++|++||+++|..++..++.. ..+.+|.+....|.+...+....|... .++..+|.
T Consensus 105 ~v~~~~sgsea~~~al~~~~~~------------g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 170 (398)
T PRK03244 105 RVFFCNSGAEANEAAFKLARLT------------GRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-- 170 (398)
T ss_pred EEEEeCchHHHHHHHHHHHHHH------------CCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC--
Confidence 5899999999999999988764 134456665666666555554443210 12333443
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccchhhhhc
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
.|++++++.+.+ ++.+|++..+.+++|.+.| +++|.++|++||+++++|++|++.-.....+.....
T Consensus 171 ---~d~~~l~~~~~~------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~ 241 (398)
T PRK03244 171 ---GDVDALAAAVDD------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHD 241 (398)
T ss_pred ---CCHHHHHHhhcC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhh
Confidence 278999988742 4788999999999999887 899999999999999999998742111110111112
Q ss_pred CCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 151 GINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
++ ..|++++ .|++++...+|.++.+++
T Consensus 242 ~~-~pDi~t~--sK~l~~G~~ig~~~~~~~ 268 (398)
T PRK03244 242 GV-TPDVVTL--AKGLGGGLPIGACLAFGP 268 (398)
T ss_pred CC-CCCEEEE--chhhhCCcccEEEEEcHH
Confidence 33 3577665 699986667888887654
No 135
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.71 E-value=1.8e-15 Score=154.40 Aligned_cols=145 Identities=10% Similarity=0.013 Sum_probs=107.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC-CCCcEEEEecCCCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI-GMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~-~~~~v~~v~~~~~g~id~e~ 82 (448)
..+++++|+.++..++.+... +++.|+++...|............ ....+..++. .|+++
T Consensus 78 ~al~~~sG~~Ai~~~l~al~~--------------~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~-----~d~~~ 138 (386)
T PRK06767 78 EALAFGSGMAAISATLIGFLK--------------AGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM-----ETEAD 138 (386)
T ss_pred cEEEECCHHHHHHHHHHHHhC--------------CCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC-----CCHHH
Confidence 468889999887777655543 667888998888776655543321 0113444433 38899
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
+++++++ ++++|++++++|++|.+.|+++|.++||++|++++||+||+.+....+. . .++|+++.|+
T Consensus 139 l~~~i~~------~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl-----~--~g~Div~~S~ 205 (386)
T PRK06767 139 IENKIRP------NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPL-----E--LGCDAVVHSA 205 (386)
T ss_pred HHHhhCc------CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCch-----h--cCCcEEEecC
Confidence 9988854 4789999999999999999999999999999999999999765442221 1 2579999999
Q ss_pred ccccCCCCc--eEEEEEecc
Q psy14299 163 HKMLGAPLQ--CSILLIKEK 180 (448)
Q Consensus 163 hK~l~~P~g--~G~l~vr~~ 180 (448)
+|+++++.. .|+++.+++
T Consensus 206 sK~l~g~g~~~gG~v~~~~~ 225 (386)
T PRK06767 206 TKYIGGHGDVVAGVTICKTR 225 (386)
T ss_pred cceecCCCCceeEEEEeChH
Confidence 999998876 466666543
No 136
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.71 E-value=1.2e-15 Score=153.98 Aligned_cols=261 Identities=14% Similarity=0.175 Sum_probs=172.3
Q ss_pred CCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC--CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHH
Q psy14299 39 PPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN--ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLD 116 (448)
Q Consensus 39 ~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~--~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~ 116 (448)
+++.|+++...|..+...++..|. .++.++.+ .++.+|+++|++.+++....+.++++|+++.++|+||...+.+
T Consensus 92 ~~~~vlv~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~ 168 (363)
T PF00155_consen 92 PGDTVLVPDPCYPSYIEAARLLGA---EVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLE 168 (363)
T ss_dssp TTSEEEEEESSSTHHHHHHHHTTS---EEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HH
T ss_pred ccccceecCCccccccccccccCc---eeeeccccccccccccccccccccccccccccccceeeecccccccccccccc
Confidence 567799999999999999999999 68888854 6789999999999988544433578999999999999886655
Q ss_pred H---HHHHHHHcCCEEEEecccccccccccch---hhhhcCCCCc-cEEEECCccccCCCC-ceEEEEEeccchhhhhcc
Q psy14299 117 E---IATVCEKYDLWMHVDACWGGSLIFSEKY---SFVLKGINRA-NSVSWNPHKMLGAPL-QCSILLIKEKGLLHQANA 188 (448)
Q Consensus 117 ~---I~~ia~~~g~~l~VD~A~~~~~~~~~~~---~~~~~~~~~a-D~~~~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~ 188 (448)
+ |+++|++||+++++|.+|+......... ...+.. .. -+++.|+.|.++.|. -.|++++ ++.+......
T Consensus 169 ~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~--~~~vi~~~S~SK~~g~~GlRvG~i~~-~~~~~~~l~~ 245 (363)
T PF00155_consen 169 ELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDE--DDNVIVVGSLSKSFGLPGLRVGYIVA-PPELIERLRR 245 (363)
T ss_dssp HHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTT--TSTEEEEEESTTTTTSGGGTEEEEEE-EHHHHHHHHH
T ss_pred cccchhhhhcccccceeeeeceeccccCCCccCcccccccc--cccceeeeeccccccccccccccccc-hhhhhhhhhh
Confidence 5 5555999999999999999877642211 111221 12 377789999998763 5788777 4444333221
Q ss_pred CCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhh
Q psy14299 189 TAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQAN 268 (448)
Q Consensus 189 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (448)
....+.. ......++...+...+.
T Consensus 246 ~~~~~~~-----------------------~~~~~~~~~~~l~~~~~--------------------------------- 269 (363)
T PF00155_consen 246 FQRSGLS-----------------------SSPMQAAAAAALSDPEL--------------------------------- 269 (363)
T ss_dssp HHHHTTS-----------------------SHHHHHHHHHHHHHHHH---------------------------------
T ss_pred ccccccc-----------------------cchhhHHHHHhhhcccc---------------------------------
Confidence 1111110 00000001111100000
Q ss_pred hhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCc
Q psy14299 269 ATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQ 348 (448)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~ 348 (448)
-..-++++.++..+.++++.+.|+++ |+.+. . +.
T Consensus 270 -------------------------------------------~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~-~-~~ 303 (363)
T PF00155_consen 270 -------------------------------------------VEKWLEELRERLRENRDLLREALEEI-GITVL-P-PE 303 (363)
T ss_dssp -------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEE-H-HS
T ss_pred -------------------------------------------cccccccchhhHHHHHHHHHHHHHHh-hhhee-e-cc
Confidence 00135567788888999999999998 99987 3 33
Q ss_pred eeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHH
Q psy14299 349 CTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAID 427 (448)
Q Consensus 349 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~ 427 (448)
.+.+.+...+.. ...++.+.|.++ | +.+.++...+. ++++|+++. ..++++++++++
T Consensus 304 ~~~~~~~~~~~~----------------~~~~l~~~L~~~~g-i~v~pg~~~~~--~~~iRi~~a---~~~~e~~~~~~~ 361 (363)
T PF00155_consen 304 AGFFLWVRLDPN----------------DAEELAQELLEEYG-ILVRPGSYFGV--PGYIRISLA---SHSEEDLEEALE 361 (363)
T ss_dssp BSSEEEEEESHH----------------HHHHHHHHHHHHHT-EEEEEGGGGTS--TTEEEEEGG---CSCHHHHHHHHH
T ss_pred CccEEEEEcccc----------------hHHHHHHHHHHhCC-EEEEecCCCCC--CCEEEEEec---cCCHHHHHHHHh
Confidence 666666432211 134788889998 8 55555544443 589999993 579999999998
Q ss_pred HH
Q psy14299 428 QI 429 (448)
Q Consensus 428 al 429 (448)
+|
T Consensus 362 ~l 363 (363)
T PF00155_consen 362 RL 363 (363)
T ss_dssp HH
T ss_pred hC
Confidence 76
No 137
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.71 E-value=3.6e-15 Score=152.02 Aligned_cols=154 Identities=10% Similarity=0.030 Sum_probs=111.7
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC--CCcCHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER--GQMICSF 82 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~--g~id~e~ 82 (448)
.++|+|+++++..++..... +++.|+++...+..+...++..|. ++..+|.+++ ..+|+++
T Consensus 94 vi~t~G~~~~l~~~~~~~~~--------------~gd~vlv~~P~y~~~~~~~~~~G~---~v~~v~~~~~~g~~~d~~~ 156 (383)
T TIGR03540 94 VLSLIGSKEGIAHIPLAFVN--------------PGDIVLVPDPGYPVYRIGTLFAGG---EPYEMPLKEENGFLPDFDA 156 (383)
T ss_pred EEECCCcHHHHHHHHHHhCC--------------CCCEEEEeCCCCcchHHHHHhcCC---EEEEEecCcccCCccCHHH
Confidence 67889999998777665433 567899999999988888888898 7889998643 4679999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhh--hhcCCCCccE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF--VLKGINRANS 157 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~--~~~~~~~aD~ 157 (448)
+++.+.+ ++++|++++++|+||...+ +++|.++|++||+++++|++|+-.......... .+.+.....+
T Consensus 157 l~~~~~~------~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i 230 (383)
T TIGR03540 157 IPEDIAK------KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGI 230 (383)
T ss_pred HHhhccc------cceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEE
Confidence 9988854 4789999999999999888 788999999999999999998754321100000 0111111235
Q ss_pred EEECCccccCCCCc--eEEEEEeccchh
Q psy14299 158 VSWNPHKMLGAPLQ--CSILLIKEKGLL 183 (448)
Q Consensus 158 ~~~s~hK~l~~P~g--~G~l~vr~~~~~ 183 (448)
...++.|.++.| | +|+++. ++++.
T Consensus 231 ~~~SfSK~~g~~-GlRiG~~i~-~~~l~ 256 (383)
T TIGR03540 231 EFHSLSKTYNMT-GWRIGMAVG-NADLI 256 (383)
T ss_pred EEEecccccCCc-cceeeEEeC-CHHHH
Confidence 667888988644 4 677655 43333
No 138
>PRK08912 hypothetical protein; Provisional
Probab=99.71 E-value=4.4e-15 Score=151.64 Aligned_cols=153 Identities=12% Similarity=0.056 Sum_probs=115.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e~ 82 (448)
..++|+|+++++..++..... +++.|+++...|..+...++..|. +++.++.++ ++.+|+++
T Consensus 89 ~i~~t~G~~~al~~~~~~~~~--------------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~ 151 (387)
T PRK08912 89 EVMVTSGATEALAAALLALVE--------------PGDEVVLFQPLYDAYLPLIRRAGG---VPRLVRLEPPHWRLPRAA 151 (387)
T ss_pred cEEEeCCcHHHHHHHHHHhcC--------------CCCEEEEeCCCchhhHHHHHHcCC---EEEEEecCcccCcCCHHH
Confidence 578999999998766655433 567789999999999999999998 788888864 57899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhh--hhcCCCCccE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF--VLKGINRANS 157 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~--~~~~~~~aD~ 157 (448)
+++.+.+ ++++|++++++|+||.+.+ +++|.++|++|++++++|.+|+........... ...+....++
T Consensus 152 l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i 225 (387)
T PRK08912 152 LAAAFSP------RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTV 225 (387)
T ss_pred HHHHhCc------cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceE
Confidence 9998853 4788999999999998876 777999999999999999998754331111011 1112223468
Q ss_pred EEECCccccCCC-CceEEEEEec
Q psy14299 158 VSWNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 158 ~~~s~hK~l~~P-~g~G~l~vr~ 179 (448)
++.|++|.++.| .-+|+++..+
T Consensus 226 ~~~S~SK~~g~~GlRiG~~~~~~ 248 (387)
T PRK08912 226 KIGSAGKIFSLTGWKVGFVCAAP 248 (387)
T ss_pred EEeechhhccCcCceeEEEecCH
Confidence 889999988744 2378777643
No 139
>PLN02452 phosphoserine transaminase
Probab=99.71 E-value=1.2e-15 Score=153.82 Aligned_cols=251 Identities=12% Similarity=0.098 Sum_probs=164.0
Q ss_pred CCchH--HHHHHHHhCCCCCcEEEEecCCCC---CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccc-ccCHHHHHHH
Q psy14299 48 DSHYS--MLKAAHWLGIGMDNVIRVKTNERG---QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA-FDPLDEIATV 121 (448)
Q Consensus 48 ~~H~s--~~~~~~~~g~~~~~v~~v~~~~~g---~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~-~~~l~~I~~i 121 (448)
..+++ +.+.++..|. ..+.....+.. .++++++ +. ......|.++|++|.+|+ +.|++++++
T Consensus 103 ~G~fg~r~~~~a~~~g~---~~~~~~~~~~~~~~~~~~~~~----~~----~~~~~~v~~~hnETstGv~~~~~~~i~~- 170 (365)
T PLN02452 103 TGSWSKKAAKEAKKYCK---TNVIASGKDEKYTKIPSVSEW----EL----TPDAKFVHICANETIHGVEFKDYPDVGN- 170 (365)
T ss_pred CCHHHHHHHHHHHHhCC---CcEEEecCCCCCCCCCChHHc----CC----CCCCcEEEECCCCCCCcEecCcccccCC-
Confidence 45554 4566666665 22222222222 4566664 21 234779999999999999 599988863
Q ss_pred HHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCccc
Q psy14299 122 CEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFY 201 (448)
Q Consensus 122 a~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~ 201 (448)
+.++||++++++..+++.... ++...++||+++ |+|.|++++|++. +.......+.|+....
T Consensus 171 -----~~lvVDa~Ss~g~~pidv~~~--------~v~~~saqK~lG-P~Gl~~v~vr~~~-l~~~~~~~~~~~~~~~--- 232 (365)
T PLN02452 171 -----VPLVADMSSNFLSKPVDVSKY--------GVIYAGAQKNVG-PSGVTIVIIRKDL-IGNARPITPGMLDYKI--- 232 (365)
T ss_pred -----CeEEEECCccccCcccCHHHc--------CEEEEecccccC-CCCeEEEEEcHHH-HhhcccCCCchhhHHH---
Confidence 899999999999987764332 344479999995 9999999998864 3332221222221000
Q ss_pred ccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccc
Q psy14299 202 DVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKF 281 (448)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (448)
..+
T Consensus 233 ------------------------------------~~~----------------------------------------- 235 (365)
T PLN02452 233 ------------------------------------HAE----------------------------------------- 235 (365)
T ss_pred ------------------------------------HHh-----------------------------------------
Confidence 000
Q ss_pred cccccCCCCCccccccchhhHHHHHHHHHhcCc-cHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCC--ce-eeEEEEee
Q psy14299 282 YDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL-GFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEF--QC-TNICFWFI 357 (448)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~--~~-~~v~f~~~ 357 (448)
.+....-++...+.++..+++++.++ |++.+.+++.++++++++.|++.+||-....++ ++ .+++|++.
T Consensus 236 -------~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~ 308 (365)
T PLN02452 236 -------NDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLG 308 (365)
T ss_pred -------cCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcC
Confidence 00001123355677788889988876 899999999999999999999988882210111 23 46777643
Q ss_pred ccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 358 PVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
... ...++.+.+.++|.+.+.+- ... +.+|+|+. ...+.++++.|++.+++..++
T Consensus 309 ~~~----------------~~~~f~~~~~~~g~~~~~G~--r~~---gg~R~s~y--na~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 309 GSE----------------LEAEFVKEAAKAGMVQLKGH--RSV---GGMRASIY--NAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred Cch----------------hHHHHHHHHHHCCCcccCCc--ccc---CceEEECc--CCCCHHHHHHHHHHHHHHHHh
Confidence 211 23489999999995443321 112 33999995 477899999999999998765
No 140
>PLN00175 aminotransferase family protein; Provisional
Probab=99.71 E-value=6.2e-15 Score=151.89 Aligned_cols=152 Identities=12% Similarity=0.023 Sum_probs=113.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e~ 82 (448)
..++|+|+++++..++.+... +++.|++++..|..+...++..|. +++.++.++ ++.+|+++
T Consensus 117 ~I~vt~G~~~al~~~~~~l~~--------------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~ 179 (413)
T PLN00175 117 EVTVTSGCTEAIAATILGLIN--------------PGDEVILFAPFYDSYEATLSMAGA---KIKTVTLRPPDFAVPEDE 179 (413)
T ss_pred CEEEeCCHHHHHHHHHHHhCC--------------CCCEEEEeCCCchhHHHHHHHcCC---EEEEEECCcccCCCCHHH
Confidence 478899999998777665433 667889999999999999999898 788998864 57899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchh-hhhcCCCCccEE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYS-FVLKGINRANSV 158 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~-~~~~~~~~aD~~ 158 (448)
|++.+.+ ++++|++++++|+||.+.+ +++|+++|++||+++++|++|....+..+... ..+.+...-.++
T Consensus 180 l~~~~~~------~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~ 253 (413)
T PLN00175 180 LKAAFTS------KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVT 253 (413)
T ss_pred HHHhcCc------CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEE
Confidence 9998854 4789999999999998864 78899999999999999999876543211100 001111122366
Q ss_pred EECCccccCCCC-ceEEEEEe
Q psy14299 159 SWNPHKMLGAPL-QCSILLIK 178 (448)
Q Consensus 159 ~~s~hK~l~~P~-g~G~l~vr 178 (448)
+.|+.|.++.|. -+|+++..
T Consensus 254 i~SfSK~~~~~G~RiG~~v~~ 274 (413)
T PLN00175 254 MNSLGKTFSLTGWKIGWAIAP 274 (413)
T ss_pred EecchhhccCcchheeeeEeC
Confidence 678899987553 45666553
No 141
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.71 E-value=3.5e-15 Score=152.77 Aligned_cols=152 Identities=10% Similarity=0.072 Sum_probs=111.8
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICSF 82 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e~ 82 (448)
.++|+|+++++..++.+... +++.|+++..++..+...+...|. +++.++.+. ++.+|+++
T Consensus 100 i~vt~G~~~al~~~~~~~~~--------------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~ 162 (394)
T PRK05942 100 ALPLLGSKEGLTHLALAYVN--------------PGDVVLVPSPAYPAHFRGPLIAGA---QIYPIILKPENDWLIDLSS 162 (394)
T ss_pred EEEccChHHHHHHHHHHhCC--------------CCCEEEEcCCCCcchHHHHHHcCC---EEEEeecCCccCCccCHHH
Confidence 66789999998777665433 677899999999998888888888 788888864 34799999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhh--hhcCCCCccE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF--VLKGINRANS 157 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~--~~~~~~~aD~ 157 (448)
+++.+.+ ++++|++++++|+||.+.+ +++|.++|++||+++++|++|+-.......... .+.+.....+
T Consensus 163 l~~~~~~------~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i 236 (394)
T PRK05942 163 IPEEVAQ------QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGV 236 (394)
T ss_pred HHHhccc------cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEE
Confidence 9998854 5789999999999999987 888999999999999999998754431110000 0111112235
Q ss_pred EEECCccccCCC-CceEEEEEec
Q psy14299 158 VSWNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 158 ~~~s~hK~l~~P-~g~G~l~vr~ 179 (448)
.+.++.|.++.| ..+|+++..+
T Consensus 237 ~~~SfSK~~~~~GlRiG~i~~~~ 259 (394)
T PRK05942 237 EFHTLSKTYNMAGWRVGFVVGNR 259 (394)
T ss_pred EEecchhccCChhhheeeeecCH
Confidence 567888987644 3478776533
No 142
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.71 E-value=6.1e-15 Score=150.15 Aligned_cols=147 Identities=12% Similarity=0.062 Sum_probs=110.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHH-hCCCCCcEEEEecCCCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHW-LGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~-~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
.+++|+||++++..++.+... +++.|+++...|.+....+.. ......++..++. .|+++
T Consensus 70 ~ivvt~gg~~Ai~~~l~all~--------------~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~-----~d~e~ 130 (388)
T PRK08861 70 GAVVTNCGTSALNLWVSALLG--------------PDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ-----SDAAA 130 (388)
T ss_pred eEEEECCHHHHHHHHHHHHcC--------------CCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC-----CCHHH
Confidence 578999999998888766543 567788888888865554422 2111114555542 48899
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
+++++.+ ++++|++++++|++|.+.|+++|.++|+++|++++||.+|+.+....+. .. ++|+++.|+
T Consensus 131 l~~~i~~------~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl------~~-GaDivv~S~ 197 (388)
T PRK08861 131 LDAALAK------KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKPL------EL-GADFVIHST 197 (388)
T ss_pred HHHhcCc------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCCc------cc-CCCEEEeec
Confidence 9988854 5889999999999999999999999999999999999999876543221 11 589999999
Q ss_pred ccccCCCCc--eEEEEEeccch
Q psy14299 163 HKMLGAPLQ--CSILLIKEKGL 182 (448)
Q Consensus 163 hK~l~~P~g--~G~l~vr~~~~ 182 (448)
|||+++|.+ .|++..+++++
T Consensus 198 tK~l~G~~d~~gG~i~~~~~~~ 219 (388)
T PRK08861 198 TKYINGHSDVIGGVLITKTKEH 219 (388)
T ss_pred ceeccCCCcceeEEEEecHHHH
Confidence 999999976 45555555443
No 143
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.71 E-value=1.3e-15 Score=153.61 Aligned_cols=150 Identities=11% Similarity=0.010 Sum_probs=106.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++.+++.+...+ .++.|+++..+|..+...++..|. +++.+|.++++.+|++++
T Consensus 76 ~I~~~~Gs~e~i~~~~~~~~~~-------------g~~~vli~~P~y~~y~~~~~~~G~---~~~~v~~~~~~~~d~~~l 139 (351)
T PRK01688 76 QVLVSRGADEGIELLIRAFCEP-------------GKDAILYCPPTYGMYSVSAETIGV---EIRTVPTLDNWQLDLPAI 139 (351)
T ss_pred HEEEcCCHHHHHHHHHHHhcCC-------------CCCEEEEcCCCHHHHHHHHHHcCC---EEEEeecCCCCCCCHHHH
Confidence 3678999999987777665431 236788888999999999999998 788999988889999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc--CCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY--DLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~--g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
++++. ++++|++++++|+||.+.+.+++.++++.. +.++++|+||.-.... ......+.... -=++.-|
T Consensus 140 ~~~~~-------~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~-~s~~~~~~~~~-n~iv~rS 210 (351)
T PRK01688 140 ADNLD-------GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQ-ASLAGWLAEYP-HLVILRT 210 (351)
T ss_pred HHhcc-------CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCC-CChHHHHhhCC-CEEEEec
Confidence 98772 378999999999999999887777776532 6899999998644311 11111111111 1155668
Q ss_pred CccccCCC-CceEEEEEe
Q psy14299 162 PHKMLGAP-LQCSILLIK 178 (448)
Q Consensus 162 ~hK~l~~P-~g~G~l~vr 178 (448)
++|+++.| .-+|+++..
T Consensus 211 fSK~~glaGlRiGy~i~~ 228 (351)
T PRK01688 211 LSKAFALAGLRCGFTLAN 228 (351)
T ss_pred chHhhcCHHHHHhHHhCC
Confidence 88987633 224666653
No 144
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.71 E-value=6.9e-15 Score=149.00 Aligned_cols=276 Identities=12% Similarity=0.041 Sum_probs=175.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++...+.+..+ +++.|+++...|..+...+...|. +++.+|. .++.+|++++
T Consensus 86 ~i~~t~G~~~~l~~~~~~l~~--------------~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~-~~~~~~~~~l 147 (367)
T PRK02731 86 RIILGNGSDEILELLARAYLG--------------PGDEVIYSEHGFAVYPIAAQAVGA---KPVEVPA-KDYGHDLDAM 147 (367)
T ss_pred HEEEcCCHHHHHHHHHHHhcC--------------CCCEEEEecCCHHHHHHHHHHcCC---eEEEecc-cCCCCCHHHH
Confidence 367888888876555544332 566788888888777777788888 7888887 4678899999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc--CCEEEEecccccccccccchh-hhhcCCCCccEEEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY--DLWMHVDACWGGSLIFSEKYS-FVLKGINRANSVSW 160 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~--g~~l~VD~A~~~~~~~~~~~~-~~~~~~~~aD~~~~ 160 (448)
++.+++ ++++|++++++|+||.+.|.++|.++++.+ |+++++|++|.......+... ........-.+++.
T Consensus 148 ~~~~~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 221 (367)
T PRK02731 148 LAAVTP------RTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTR 221 (367)
T ss_pred HHHhCC------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEe
Confidence 998853 478999999999999999999999999875 899999999875443111000 00000111125556
Q ss_pred CCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 161 NPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 161 s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
+..|.++.| ..+|+++.++ ++..........+ . . ..+..+++...+
T Consensus 222 S~SK~~g~~G~RiG~l~~~~-~~~~~l~~~~~~~-----------------~--~----~~~~~~~a~~~l--------- 268 (367)
T PRK02731 222 TFSKAYGLAGLRVGYGIAPP-EIIDALNRVRQPF-----------------N--V----NSLALAAAVAAL--------- 268 (367)
T ss_pred eehHhhcCcccceeeeeCCH-HHHHHHHHccCCC-----------------C--C----CHHHHHHHHHHh---------
Confidence 888987644 3568887754 3333322111000 0 0 001111111111
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 319 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 319 (448)
+ ....++++
T Consensus 269 ---------------------------------------------------------------------~--~~~~~~~~ 277 (367)
T PRK02731 269 ---------------------------------------------------------------------D--DDAFVEKS 277 (367)
T ss_pred ---------------------------------------------------------------------C--CHHHHHHH
Confidence 0 01224556
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecC
Q psy14299 320 VDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQ 399 (448)
Q Consensus 320 ~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~ 399 (448)
.++..++.+++.+.|+++ |+.+. ++..+.+.+.+ +...+ ..++.+.|.++| +.+.+....
T Consensus 278 ~~~~~~~~~~l~~~L~~~-g~~~~--~~~g~~~~i~~-~~~~~---------------~~~~~~~L~~~g-I~v~~~~~~ 337 (367)
T PRK02731 278 RALNAEGMAWLTEFLAEL-GLEYI--PSVGNFILVDF-DDGKD---------------AAEAYQALLKRG-VIVRPVAGY 337 (367)
T ss_pred HHHHHHHHHHHHHHHHHC-CCccC--CCCceEEEEEC-CCCCC---------------HHHHHHHHHHCC-EEEEeCCCC
Confidence 667777888899999988 88764 34455555543 22111 237888999988 555544333
Q ss_pred CcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 400 HRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 400 g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
+. ++++|+++ + +.+|+++++++|+++.+
T Consensus 338 ~~--~~~iRis~--~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 338 GL--PNALRITI--G---TEEENRRFLAALKEFLA 365 (367)
T ss_pred CC--CCeEEEec--C---CHHHHHHHHHHHHHHHh
Confidence 31 37899999 3 68999999999998754
No 145
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.70 E-value=2.7e-15 Score=152.74 Aligned_cols=143 Identities=14% Similarity=0.113 Sum_probs=110.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++|+.++..++. ... +++.|+++...|.+....+ ...|+ +++.++.+ |
T Consensus 64 ~~l~~~sG~~al~~~l~-ll~--------------~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~---~v~~vd~~-----d 120 (378)
T TIGR01329 64 RAFAFSSGMAALDVITR-LLN--------------NGDEIIAGDDLYGGTDRLLTQVVPRSGV---VVVHVDTT-----D 120 (378)
T ss_pred cEEEECCHHHHHHHHHH-HhC--------------CCCEEEEcCCCchHHHHHHHHHHHHcCc---EEEEeCCC-----C
Confidence 35778888877654443 222 6678888988888776543 44566 67777764 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++++++|++|.+.|+++|+++||+||++++||++++.+....+. .. ++|+++
T Consensus 121 ~~~le~~i~~------~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l------~~-g~Di~v 187 (378)
T TIGR01329 121 LDKVKAALGP------KTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCNPL------EL-GADIVY 187 (378)
T ss_pred HHHHHHhcCc------CceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh------hc-CCcEEE
Confidence 9999998854 5889999999999999999999999999999999999998766442111 11 479999
Q ss_pred ECCccccCCCCc--eEEEEEeccch
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKEKGL 182 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~~~~ 182 (448)
.|+||++++|.+ .|+++++++.+
T Consensus 188 ~S~tK~l~G~~~~~~G~v~~~~~~~ 212 (378)
T TIGR01329 188 HSATKFLAGHSDVMAGVLAVKGEEI 212 (378)
T ss_pred EecceeccCCccceeEEEEeCcHHH
Confidence 999999999987 88888876543
No 146
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.70 E-value=1.4e-14 Score=152.34 Aligned_cols=161 Identities=11% Similarity=0.176 Sum_probs=117.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH-HhCCCCCcEEEEecC--CCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH-WLGIGMDNVIRVKTN--ERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~-~~g~~~~~v~~v~~~--~~g~id~ 80 (448)
..++|+|+++++.+.+.+... |++.|+++...+..+...++ ..|+ +++.+|.+ +++.+|+
T Consensus 121 ~Ivit~Ga~~al~~l~~~l~~--------------pGD~Vlv~~P~Y~~~~~~~~~~~G~---~vv~v~~~~~~~~~~~~ 183 (496)
T PLN02376 121 RVVMSGGATGANETIMFCLAD--------------PGDVFLIPSPYYAAFDRDLRWRTGV---EIIPVPCSSSDNFKLTV 183 (496)
T ss_pred hEEEccchHHHHHHHHHHhCC--------------CCCEEEECCCCccchHHHHHhhCCC---EEEEEeCCCCccCcCCH
Confidence 467899999998877776544 67789999999999888777 4788 78899985 3568999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhh---hhcCCC-
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF---VLKGIN- 153 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~---~~~~~~- 153 (448)
+++++++++..+.+.++++|+++.++|+||.+.+ +++|.++|++||+++++|.+|+...+..+.... ......
T Consensus 184 ~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~ 263 (496)
T PLN02376 184 DAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDI 263 (496)
T ss_pred HHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccc
Confidence 9999887654444457899999999999998877 666888999999999999999875432111111 111000
Q ss_pred ---Ccc--EEEECCccccCCC-CceEEEEEeccc
Q psy14299 154 ---RAN--SVSWNPHKMLGAP-LQCSILLIKEKG 181 (448)
Q Consensus 154 ---~aD--~~~~s~hK~l~~P-~g~G~l~vr~~~ 181 (448)
..| .++.++.|.++.| .-+|+++..++.
T Consensus 264 ~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~ 297 (496)
T PLN02376 264 SEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDS 297 (496)
T ss_pred cccCCCeEEEEEeccccCCCCcceEEEEEECCHH
Confidence 012 2357999999766 567887775443
No 147
>PLN02187 rooty/superroot1
Probab=99.70 E-value=9.6e-15 Score=152.44 Aligned_cols=152 Identities=10% Similarity=0.060 Sum_probs=112.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC--CCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN--ERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~--~~g~id~e 81 (448)
..++|+|+++++.+++.+..+ +++.|+++...+..+...++..|. +++.++.. .++.+|++
T Consensus 133 ~I~it~G~~~al~~~~~~l~~--------------pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~l~~~~~~~~d~~ 195 (462)
T PLN02187 133 DIFLTAGCNQGIEIVFESLAR--------------PNANILLPRPGFPHYDARAAYSGL---EVRKFDLLPEKEWEIDLE 195 (462)
T ss_pred cEEEeCCHHHHHHHHHHHhcC--------------CCCEEEEeCCCCccHHHHHHHcCC---EEEEEeCccccCCccCHH
Confidence 478999999998888776543 677889999999988888888888 78888764 46789999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCC-Ccc-
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGIN-RAN- 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~-~aD- 156 (448)
+|++++++ +++++++++++|+||.+.+ +++|+++|++||+++++|++|.-..+....... +..+. ...
T Consensus 196 ~l~~~~~~------~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s-~~~~~~~~~v 268 (462)
T PLN02187 196 GIEAIADE------NTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVS-MGKFASIVPV 268 (462)
T ss_pred HHHHhcCC------CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcee-HHHhccCCcE
Confidence 99988754 4789999999999999876 888999999999999999998864431111000 11110 111
Q ss_pred EEEECCccccCCC-CceEEEEEec
Q psy14299 157 SVSWNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 157 ~~~~s~hK~l~~P-~g~G~l~vr~ 179 (448)
+++.|+.|.++.| .-+|+++..+
T Consensus 269 i~l~SfSK~f~~pGlRiG~~v~~~ 292 (462)
T PLN02187 269 LTLAGISKGWVVPGWKIGWIALND 292 (462)
T ss_pred EEEecchhhcCCccceeEEEEecC
Confidence 4456889986666 3467666533
No 148
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.70 E-value=1.1e-14 Score=149.54 Aligned_cols=152 Identities=14% Similarity=0.067 Sum_probs=112.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|+|+++.+++.+... +++.|+++..++..+...+...|. ++..++.++ ++.+|++
T Consensus 98 ~ii~t~G~t~al~~~~~~l~~--------------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~ 160 (403)
T TIGR01265 98 DVVLTSGCSQAIEICIEALAN--------------PGANILVPRPGFPLYDTRAAFSGL---EVRLYDLLPEKDWEIDLD 160 (403)
T ss_pred HEEEecChHHHHHHHHHHhCC--------------CCCEEEEeCCCchhHHHHHHHcCC---EEEEecCCcccCCccCHH
Confidence 478999999998888876543 566788898999888888888888 677777643 5689999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCC-Ccc-
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGIN-RAN- 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~-~aD- 156 (448)
++++++.+ +++++++++++|++|.+.+ +++|.++|+++|+++++|++|+......+.... +..+. ...
T Consensus 161 ~l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~v 233 (403)
T TIGR01265 161 GLEALADE------KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIP-MASFASIVPV 233 (403)
T ss_pred HHHHHhCc------CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccc-hhhhccCCcE
Confidence 99998754 4778999999999998865 899999999999999999998855432111111 11111 112
Q ss_pred EEEECCccccCCC-CceEEEEEec
Q psy14299 157 SVSWNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 157 ~~~~s~hK~l~~P-~g~G~l~vr~ 179 (448)
+++.|+.|.++.| .-+|++++.+
T Consensus 234 i~~~S~SK~~~~pGlRiG~~v~~~ 257 (403)
T TIGR01265 234 LSLGGISKRWVVPGWRLGWIIIHD 257 (403)
T ss_pred EEEeecccccCCCcceEEEEEEeC
Confidence 4556889987666 4477776643
No 149
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.70 E-value=1.1e-14 Score=154.36 Aligned_cols=151 Identities=10% Similarity=-0.007 Sum_probs=110.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|+++++.+++.+..+ +++.|+++...+..+...+++.|. +++.++.++ ++.+|++
T Consensus 210 ~I~it~G~~eal~~~~~~l~~--------------~Gd~Vli~~P~y~~y~~~~~~~g~---~~v~~~~~~~~~~~~d~~ 272 (517)
T PRK13355 210 DIYTGNGVSELINLSMSALLD--------------DGDEVLIPSPDYPLWTACVNLAGG---TAVHYRCDEQSEWYPDID 272 (517)
T ss_pred HEEEeCcHHHHHHHHHHHhCC--------------CCCEEEEcCCCCcCHHHHHHHCCC---EEEEeecCcccCCCCCHH
Confidence 478899999998888766543 677899999999999999999988 788888764 4689999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
++++++.+ ++++|++++++|+||.+.+ +++|.++|++||+++++|++|.-..+..........-....-++
T Consensus 273 ~l~~~~~~------~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi 346 (517)
T PRK13355 273 DIRSKITS------RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCV 346 (517)
T ss_pred HHHHhcCc------CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEE
Confidence 99998854 5789999999999999888 88899999999999999999874332110101100100111133
Q ss_pred E-ECCccccCCC-CceEEEEE
Q psy14299 159 S-WNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 159 ~-~s~hK~l~~P-~g~G~l~v 177 (448)
+ .++.|.++.| .-+|++++
T Consensus 347 ~~~S~SK~~~~~G~RiG~~i~ 367 (517)
T PRK13355 347 TFSGLSKSHMIAGYRIGWMIL 367 (517)
T ss_pred EEecchhhccCcccceEEEEe
Confidence 3 5778987654 23677765
No 150
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.70 E-value=9.5e-15 Score=147.58 Aligned_cols=151 Identities=14% Similarity=0.080 Sum_probs=102.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC--CCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER--GQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~--g~id~e 81 (448)
..++|+|+++++..++.+. . ++++++ ....+..+...++..|. +++.+|.+++ ..+| +
T Consensus 74 ~i~it~Ga~~~l~~~~~~l-~--------------~g~viv-~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~-~ 133 (356)
T PRK08056 74 WILAGNGETESIFAVVSGL-K--------------PRRAMI-VTPGFAEYRRALQQVGC---EIRRYSLREADGWQLT-D 133 (356)
T ss_pred hEEECCCHHHHHHHHHHHh-C--------------CCCEEE-eCCCcHHHHHHHHHcCC---eEEEEecccccCCCcc-H
Confidence 4678999999877666543 2 334444 44566677788888888 7889988643 3444 3
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
++++.+. .++++|++++++|+||...+ +++|+++|++||+++++|++|.............+... ...++
T Consensus 134 ~~~~~~~------~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~i~ 206 (356)
T PRK08056 134 AILEALT------PDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADN-PHLWV 206 (356)
T ss_pred HHHHhcc------CCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccC-CCEEE
Confidence 4444443 25789999999999999988 88899999999999999999864432110000111221 24578
Q ss_pred EECCccccCCC-CceEEEEEeccc
Q psy14299 159 SWNPHKMLGAP-LQCSILLIKEKG 181 (448)
Q Consensus 159 ~~s~hK~l~~P-~g~G~l~vr~~~ 181 (448)
+.|++|+++.| .-+|+++..++.
T Consensus 207 ~~S~SK~~~~~G~RiG~~v~~~~~ 230 (356)
T PRK08056 207 LRSLTKFYAIPGLRLGYLVNSDDA 230 (356)
T ss_pred EEechhhccCcchhheeeecCCHH
Confidence 89999999855 557777654433
No 151
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.70 E-value=6.2e-15 Score=148.48 Aligned_cols=149 Identities=11% Similarity=-0.061 Sum_probs=111.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++.+++.+..+ +++.|+++...|..+...++..|+ +++.+|.++++.+|++++
T Consensus 79 ~I~it~G~~~al~~~~~~l~~--------------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l 141 (353)
T PRK05387 79 QVFVGNGSDEVLAHAFLAFFN--------------HDRPLLFPDITYSFYPVYAGLYGI---PYEEIPLDDDFSIDVEDY 141 (353)
T ss_pred HEEEcCCHHHHHHHHHHHhcC--------------CCCEEEEeCCCHHHHHHHHHHcCC---EEEEeecCCCCCCCHHHH
Confidence 478999999998888776654 567788898888778887888888 788999988889999988
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc-CCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY-DLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~-g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
++ ..++|++++++|+||.+.|.+++.++++.+ ++++++|.+|..... .......... .-.+++.|+
T Consensus 142 ~~----------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~--~~~~~~~~~~-~~~i~~~S~ 208 (353)
T PRK05387 142 LR----------PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGG--ESAIPLIDRY-PNLLVVQTF 208 (353)
T ss_pred Hh----------cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCC--cchHHHHhhC-CCEEEEEeh
Confidence 63 135789999999999999999999999886 999999999853211 1111111111 235788899
Q ss_pred ccccCCC-CceEEEEEeccchh
Q psy14299 163 HKMLGAP-LQCSILLIKEKGLL 183 (448)
Q Consensus 163 hK~l~~P-~g~G~l~vr~~~~~ 183 (448)
.|.++.| .-+|+++. ++++.
T Consensus 209 SK~~~~~GlR~G~~~~-~~~~~ 229 (353)
T PRK05387 209 SKSRSLAGLRVGFAIG-HPELI 229 (353)
T ss_pred hHhhcchhhhceeeec-CHHHH
Confidence 9988755 34677665 33433
No 152
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.70 E-value=2.8e-15 Score=142.68 Aligned_cols=293 Identities=15% Similarity=0.154 Sum_probs=204.9
Q ss_pred EEeCcHHHHHHHH-HHHHHHhcCCcccccCCCCCCCeEEEecCCCc-----hHHHHHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 6 FLLPGGSISNMYS-ICLARYRLDPDTKRKGLSHLPPLCMFTSEDSH-----YSMLKAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 6 ~~t~ggT~an~~a-l~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H-----~s~~~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
+.+.++|..|+.- +.++.+. .++..|++++..- |-....|.+++.+ .+-.+.++
T Consensus 96 vvv~dtts~nl~k~L~aalr~------------~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~--------~~~~~~~~ 155 (407)
T COG3844 96 VVVTDTTSINLFKVLAAALRP------------QEGRRVIVSEGDNFPTDLYIAEGLADLLGIG--------YDLEGVIA 155 (407)
T ss_pred eEEeCCcchHHHHHHHHHhcc------------CCCceEEeecCCCCCcchhhhcchhhhhccc--------ccceeeeC
Confidence 3445556666554 4444443 1344556664332 2233444555543 22345668
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
|.++++++.++ +.+|.++++++-||...|+.+|..++|++|+++..|=||++|..+.+-.. .++|+-+
T Consensus 156 P~~~~~~~~dd------~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~------~gaDfai 223 (407)
T COG3844 156 PRALEEAITDD------VAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHA------AGADFAI 223 (407)
T ss_pred hHHHHHhhccc------eEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecc------cCCCeee
Confidence 88999999773 77899999999999999999999999999999999999999999776432 3689999
Q ss_pred ECCcccc-CCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 160 WNPHKML-GAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 160 ~s~hK~l-~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
.++||.| ++|.+.+++++.++. .+...+...+|...... ++..+.+.+
T Consensus 224 gcsyKYLNgGPGapa~l~v~~~h-~e~~~~~lsgW~gha~p------------f~m~~~y~p------------------ 272 (407)
T COG3844 224 GCSYKYLNGGPGAPAGLFVAPRH-RERSWPPLSGWWGHARP------------FAMEEVYAP------------------ 272 (407)
T ss_pred eeeceeccCCCCCceeEEecccc-ccccccccccccCCCCc------------chhhhccCc------------------
Confidence 9999988 458888999997764 23333333344332110 000001000
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcccccc--chhhHHHHHHHHHhcCccH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGR--KVDAFKLWLMWKARGNLGF 316 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~G~ 316 (448)
--+...|.|++ ..++..+..+|+.-...++
T Consensus 273 ------------------------------------------------~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i 304 (407)
T COG3844 273 ------------------------------------------------GPGARRFLCGTQPVLSLAALEGALDIFADVDI 304 (407)
T ss_pred ------------------------------------------------CccccceeeCCcchhhhHHHhhhhhhhhhcCH
Confidence 01234577777 7788888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCC---CeEEeccC----CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCC
Q psy14299 317 RHFVDNAVDCSRYFLSQISQRP---GFRLVIPE----FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGG 389 (448)
Q Consensus 317 ~~~~~~~~~l~~~~~~~L~~~p---g~~l~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g 389 (448)
.+++++...|+.||.+.++.+- ++++. .| .+.+-++|... ...++.+.|.++|
T Consensus 305 ~~lR~kSlaLTd~fieLvEa~~~~~~l~l~-tPr~~~~rGsqvS~~hp-------------------~~~~V~qaLi~rG 364 (407)
T COG3844 305 TELRKKSLALTDYFIELVEARCEYYGLTLV-TPRAHEERGSQVSLYHP-------------------HGYQVMQALIDRG 364 (407)
T ss_pred HHHHHhhhHHHHHHHHHHHhccccCCcEEe-ccchhhhccceeeEecC-------------------cHHHHHHHHHHcC
Confidence 9999999999999999998763 57887 33 35677777542 1247899999999
Q ss_pred cEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 390 TLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 390 ~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
++ +..+. ++.+||.++ -.|++.+||=..+++|+++..+..
T Consensus 365 Vi----gD~R~---P~vlRfgft-PlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 365 VI----GDFRE---PDVLRFGFT-PLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred cc----ccccC---CCeeeecCc-cceechhHHHHHHHHHHHHHHhhc
Confidence 43 22233 379999998 789999999999999999987643
No 153
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.70 E-value=5.7e-15 Score=149.10 Aligned_cols=272 Identities=13% Similarity=0.080 Sum_probs=176.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++..++.+... +++.|+++...+..+...++..|. +++.+|.++++.+|++++
T Consensus 83 ~I~~t~G~~~~i~~~~~~~~~--------------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~d~~~l 145 (356)
T PRK04870 83 DVLLGNGSDELIQLLALACAK--------------PGATVLAPEPGFVMYRMSAKLAGL---EFVGVPLTADFTLDLPAM 145 (356)
T ss_pred cEEEcCCHHHHHHHHHHHhcC--------------CCCEEEECCCCHHHHHHHHHHcCC---EEEEecCCCCCCCCHHHH
Confidence 467888888887776655433 567789999999999999999998 799999988889999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++++.+ .++++|++++++|+||.+.+.+++.++++..++++++|++|..... +.....+.... --+++.|+.
T Consensus 146 ~~~~~~-----~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~-~vi~~~S~S 217 (356)
T PRK04870 146 LAAIAE-----HRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAG--DSWLPRLARFP-NLLVMRTVS 217 (356)
T ss_pred HHHhhc-----CCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcC--cchHHHHhhCC-CEEEEecch
Confidence 999864 2578999999999999999999999988877999999999864321 11111111111 125667888
Q ss_pred cccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 164 KMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 164 K~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
| ++.| .-+|+++..+ .++.........+- ...
T Consensus 218 K-~~~~GlRiG~~i~~~-~~i~~~~~~~~~~~-----------------------~~~---------------------- 250 (356)
T PRK04870 218 K-LGLAGLRLGYLAGHP-AWIAELDKVRPPYN-----------------------VNV---------------------- 250 (356)
T ss_pred h-hhhHHHhhhhhhCCH-HHHHHHHHccCCCc-----------------------CCH----------------------
Confidence 8 4333 1266665533 33332211110000 000
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 322 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 322 (448)
+.+.....+++. .+.+++..++
T Consensus 251 --------------------------------------------------------~~q~~a~~~l~~--~~~~~~~~~~ 272 (356)
T PRK04870 251 --------------------------------------------------------LTQATALFALEH--VDVLDAQAAQ 272 (356)
T ss_pred --------------------------------------------------------HHHHHHHHHHhC--HHHHHHHHHH
Confidence 000011111211 1124556667
Q ss_pred HHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcc
Q psy14299 323 AVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRN 402 (448)
Q Consensus 323 ~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~ 402 (448)
..+.++++.+.|+++||+++. ++..+.+.+.+ + + ..++.+.|.++| +.+.+....+..
T Consensus 273 ~~~~~~~l~~~L~~~~~~~~~--~~~~~~~~~~~-~---~---------------~~~~~~~l~~~g-I~v~~~~~f~~~ 330 (356)
T PRK04870 273 LRAERTRLAAALAALPGVTVF--PSAANFILVRV-P---D---------------AAAVFDGLKTRG-VLVKNLSGMHPL 330 (356)
T ss_pred HHHHHHHHHHHHHhCCCcEEC--CCCCeEEEEEC-C---C---------------HHHHHHHHHHCC-EEEEECCCCCCC
Confidence 778888999999999898764 44444433332 1 1 136778888888 445444332222
Q ss_pred cccEEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy14299 403 LHNFFRLVTTCHPASSRQDMDYAIDQIELR 432 (448)
Q Consensus 403 ~~~~lRis~~~~~~~t~edid~l~~al~~~ 432 (448)
.++++|+++. +.+++++|+++|+++
T Consensus 331 ~~~~iRis~~-----~~~~~~~l~~al~~~ 355 (356)
T PRK04870 331 LANCLRVTVG-----TPEENAQFLAALKAA 355 (356)
T ss_pred CCCeEEEeCC-----CHHHHHHHHHHHHHh
Confidence 2479999994 789999999999875
No 154
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=7e-15 Score=150.25 Aligned_cols=145 Identities=14% Similarity=0.126 Sum_probs=109.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH----HHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML----KAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~----~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++|+.++..++. ... +++.|+++...|.+.. ..++..|+ +++.++.+ |
T Consensus 71 ~~v~~~sG~~ai~~~l~-~l~--------------~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~---~v~~v~~~-----d 127 (390)
T PRK08064 71 KGFAFASGMAAISTAFL-LLS--------------KGDHVLISEDVYGGTYRMITEVLSRFGI---EHTFVDMT-----N 127 (390)
T ss_pred CeEEECCHHHHHHHHHH-HhC--------------CCCEEEEccCccchHHHHHHHHHHHcCC---EEEEECCC-----C
Confidence 35677888877665553 222 5667888888887544 34445676 68888764 7
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++++++|++|.+.|+++|.++||++|++++||++++.+....+. .. ++|+++
T Consensus 128 ~~~l~~~l~~------~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~------~~-g~Divv 194 (390)
T PRK08064 128 LEEVAQNIKP------NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPL------DL-GADVVL 194 (390)
T ss_pred HHHHHHhcCC------CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCch------hh-CCcEEE
Confidence 8889888854 5789999999999999999999999999999999999998866542221 11 479999
Q ss_pred ECCccccCCCCc--eEEEEEeccchhh
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKEKGLLH 184 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~~~~~~ 184 (448)
.|+||++++|.+ .|+++++++++..
T Consensus 195 ~S~tK~~~G~~~~laG~~v~~~~~~~~ 221 (390)
T PRK08064 195 HSATKFLAGHSDVLAGLAVVKDEELAQ 221 (390)
T ss_pred eecceeccCCccceeEEEEeCCHHHHH
Confidence 999999999987 4777776654433
No 155
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.69 E-value=6.9e-15 Score=150.33 Aligned_cols=145 Identities=11% Similarity=0.066 Sum_probs=109.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH----HHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML----KAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~----~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
.++++++|++++..++.+... +++.|+++...|.+.. ..+...|+ ++..++.+ |
T Consensus 76 ~av~~~sG~~Ai~~~l~al~~--------------~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~---~~~~vd~~-----d 133 (391)
T TIGR01328 76 AAVATSSGMGAIAATLLTILK--------------AGDHLISDECLYGCTFALLEHALTKFGI---QVDFINMA-----I 133 (391)
T ss_pred cEEEECCHHHHHHHHHHHHhC--------------CCCEEEEecCcchHHHHHHHHHHhcCCe---EEEEECCC-----C
Confidence 368899999998877766533 5667888888775433 33444565 67777764 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++.+++|++|.+.|+++|.++||++|++++||++++.+....+ + . ..+|+++
T Consensus 134 ~e~l~~~i~~------~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~~-----~-~-~g~Divv 200 (391)
T TIGR01328 134 PEEVKAHIKD------NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTNP-----V-A-LGVDVVV 200 (391)
T ss_pred HHHHHHhhcc------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCCc-----h-h-cCCCEEE
Confidence 9999988854 578999999999999999999999999999999999999986654211 1 1 1589999
Q ss_pred ECCccccCCCCc--eEEEEEeccchhh
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKEKGLLH 184 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~~~~~~ 184 (448)
.|++|++++|.+ .|++ +.++++..
T Consensus 201 ~S~sK~lgg~g~~~gG~v-~~~~~li~ 226 (391)
T TIGR01328 201 HSATKYIGGHGDVVAGLI-CGKAELLQ 226 (391)
T ss_pred ccccccccCCCCceEEEE-EcCHHHHH
Confidence 999999998876 3544 44555443
No 156
>PRK07777 aminotransferase; Validated
Probab=99.69 E-value=1.4e-14 Score=147.83 Aligned_cols=153 Identities=11% Similarity=-0.006 Sum_probs=113.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC---CCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER---GQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~---g~id~ 80 (448)
..++|+|+|+++..++.+... +++.|+++...|..+..+++..|. +++.++.+++ +.+|+
T Consensus 87 ~i~~t~G~~~al~~~~~~~~~--------------~gd~vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~ 149 (387)
T PRK07777 87 EVLVTVGATEAIAAAVLGLVE--------------PGDEVLLIEPYYDSYAAVIAMAGA---HRVPVPLVPDGRGFALDL 149 (387)
T ss_pred cEEEeCCcHHHHHHHHHHhcC--------------CCCEEEEeCCCchhhHHHHHHCCC---EEEEeecCCccCCCcCCH
Confidence 478999999998777665432 566788888889999889898888 6788887654 46999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCcccccc---CHHHHHHHHHHcCCEEEEecccccccccccchhh--hhcCCCCc
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFD---PLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF--VLKGINRA 155 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~---~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~--~~~~~~~a 155 (448)
++|++.+.+ ++++|++++++|+||... ++++|.++|++|++++++|.+|+...+....... ...+....
T Consensus 150 ~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 223 (387)
T PRK07777 150 DALRAAVTP------RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRER 223 (387)
T ss_pred HHHHHhcCc------ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCc
Confidence 999998854 478899999999999875 4889999999999999999998754431111000 11122235
Q ss_pred cEEEECCccccCCCC-ceEEEEEec
Q psy14299 156 NSVSWNPHKMLGAPL-QCSILLIKE 179 (448)
Q Consensus 156 D~~~~s~hK~l~~P~-g~G~l~vr~ 179 (448)
++++.|++|.++.|. -+|+++..+
T Consensus 224 ~i~~~S~SK~~g~~GlRiG~~~~~~ 248 (387)
T PRK07777 224 TVTISSAAKTFNVTGWKIGWACGPA 248 (387)
T ss_pred EEEEeechhhccCcCceeEEEecCH
Confidence 688899999998662 257766543
No 157
>PRK08960 hypothetical protein; Provisional
Probab=99.69 E-value=1.1e-14 Score=148.61 Aligned_cols=151 Identities=12% Similarity=0.041 Sum_probs=110.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC--CCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER--GQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~--g~id~e 81 (448)
..++|+|+++++.+++.+... +++.|++++.+|.++...++..|. +++.++.+++ +.+|++
T Consensus 94 ~i~it~G~~~al~~~~~~~~~--------------~gd~vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~ 156 (387)
T PRK08960 94 RILVTPGGSGALLLASSLLVD--------------PGKHWLLADPGYPCNRHFLRLVEG---AAQLVPVGPDSRYQLTPA 156 (387)
T ss_pred hEEEccCcHHHHHHHHHHhcC--------------CCCEEEEcCCCCcchHHHHHhcCC---eEEEEecCcccCCCCCHH
Confidence 468999999998777765433 667899999999999999998888 6888888654 479999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
++++.+++ +++++++++++|+||...+ +++|+++|++||+++++|++|...... +.... ...+..--++
T Consensus 157 ~l~~~~~~------~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~-~~~~~-~~~~~~~vi~ 228 (387)
T PRK08960 157 LVERHWNA------DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYG-VDAAS-VLEVDDDAFV 228 (387)
T ss_pred HHHHHhCc------cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccC-CCCCC-hhhccCCEEE
Confidence 99998864 4678889999999999877 556777899999999999998754321 11111 1112111256
Q ss_pred EECCccccCCC-CceEEEEEec
Q psy14299 159 SWNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 159 ~~s~hK~l~~P-~g~G~l~vr~ 179 (448)
..|++|.++.| .-+|+++..+
T Consensus 229 ~~S~SK~~g~~GlRiG~~~~~~ 250 (387)
T PRK08960 229 LNSFSKYFGMTGWRLGWLVAPP 250 (387)
T ss_pred EeecccccCCcccEEEEEEcCH
Confidence 67899988744 2277777643
No 158
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.69 E-value=4.8e-15 Score=150.62 Aligned_cols=141 Identities=13% Similarity=0.119 Sum_probs=107.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~id 79 (448)
.+++++||+.|+..++.+... +++.|++++..+......+ ...|+ ++..++.+ +
T Consensus 67 ~~~~~~sG~~Ai~~al~all~--------------~GD~Vl~~~~~y~~t~~~~~~~~~~~gi---~v~~~d~~-----~ 124 (377)
T TIGR01324 67 GCYLYPSGLAAVTNSILAFVK--------------AGDHVLMVDSAYEPTRYFCDIVLKRMGV---DITYYDPL-----I 124 (377)
T ss_pred cEEEECcHHHHHHHHHHHhcC--------------CCCEEEEcCCCcHHHHHHHHHHHHhcCc---EEEEECCC-----C
Confidence 578999999999888876533 6677888877776655433 33455 56655432 2
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
.+++++++++ ++++|++++++|++|.+.|+++|+++||++|++++||++|+.+...-+. . .++|+++
T Consensus 125 ~e~l~~~i~~------~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~pl------~-~gaDivv 191 (377)
T TIGR01324 125 GEDIATLIQP------NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFKPL------E-HGVDISI 191 (377)
T ss_pred HHHHHHhcCC------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCcc------c-cCceEEE
Confidence 3778887754 5899999999999999999999999999999999999999988763221 1 1589999
Q ss_pred ECCccccCCCCc--eEEEEEec
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKE 179 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~ 179 (448)
.|.|||++++.+ .|+++.++
T Consensus 192 ~S~tK~l~G~~d~~gG~v~~~~ 213 (377)
T TIGR01324 192 QAGTKYLVGHSDIMIGTVVANA 213 (377)
T ss_pred ecCceeccCCCCceEEEEEeCH
Confidence 999999999875 45555433
No 159
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=4.1e-15 Score=150.11 Aligned_cols=149 Identities=14% Similarity=0.025 Sum_probs=108.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCC-eEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPP-LCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~-~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
..++|+|+++++.+++.+... ++ +.|+++...+..+...++..|. +++.+|.++++.+|++.
T Consensus 79 ~I~it~Gs~~~i~~~~~~~~~--------------~g~d~vlv~~P~y~~y~~~~~~~g~---~v~~v~~~~~~~~~~~~ 141 (354)
T PRK04635 79 QILTSRGADEAIELLIRAFCE--------------PGQDSIACFGPTYGMYAISAETFNV---GVKALPLTADYQLPLDY 141 (354)
T ss_pred HEEEeCCHHHHHHHHHHHhcC--------------CCCCeEEEcCCChHHHHHHHHHcCC---EEEEEecCCCCCCCHHH
Confidence 468999999998887766543 34 6788888888888888888888 79999998778899998
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc-CCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY-DLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~-g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+++ + + ++++|++++++|+||.+.|.+++.++++.. ++++++|++|.-.... ............ =+++.+
T Consensus 142 l~~-~-~------~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~-~s~~~~~~~~~~-~iv~~S 211 (354)
T PRK04635 142 IEQ-L-D------GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPE-YSVADLLASYPN-LVVLRT 211 (354)
T ss_pred HHh-c-c------CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccC-cchHHHHhhCCC-EEEEec
Confidence 863 3 1 478999999999999999999999999874 7999999998643211 110011111111 146678
Q ss_pred CccccCCC-CceEEEEEec
Q psy14299 162 PHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 162 ~hK~l~~P-~g~G~l~vr~ 179 (448)
++|+++.| ..+|+++.++
T Consensus 212 ~SK~~~l~GlRlG~~i~~~ 230 (354)
T PRK04635 212 LSKAFALAGARCGFTLANE 230 (354)
T ss_pred hHHHhhhhHHHHhhhhCCH
Confidence 99998633 3367776643
No 160
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.69 E-value=1.8e-14 Score=147.11 Aligned_cols=152 Identities=16% Similarity=0.128 Sum_probs=111.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC--CCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN--ERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~--~~g~id~e 81 (448)
..++|+|+++++.+++.+... +++.|+++...+..+...++..|. +++.++.. +++.+|++
T Consensus 91 ~i~it~G~~~al~~~~~~~~~--------------~gd~vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~ 153 (384)
T PRK06348 91 EIMATVGACHGMYLALQSILD--------------PGDEVIIHEPYFTPYKDQIEMVGG---KPIILETYEEDGFQINVK 153 (384)
T ss_pred hEEEcCChHHHHHHHHHHhcC--------------CCCEEEEeCCCCcchHHHHHHcCC---EEEEecCCcCcCCcCCHH
Confidence 468999999998887776544 566789999999999999998888 67788763 34579999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchh-hhhcCCCCccE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYS-FVLKGINRANS 157 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~-~~~~~~~~aD~ 157 (448)
+|++.+++ ++++|+++.++|+||.+.+ +++|.++|++||+++++|.+|+......+... ..+.+...-.+
T Consensus 154 ~l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi 227 (384)
T PRK06348 154 KLEALITS------KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTI 227 (384)
T ss_pred HHHHhhCc------CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEE
Confidence 99998853 4678888899999998865 78888999999999999999886543211000 00111111236
Q ss_pred EEECCccccCCC-CceEEEEEe
Q psy14299 158 VSWNPHKMLGAP-LQCSILLIK 178 (448)
Q Consensus 158 ~~~s~hK~l~~P-~g~G~l~vr 178 (448)
++.|+.|.++.| .-+|+++..
T Consensus 228 ~~~SfSK~~~l~GlRiG~~v~~ 249 (384)
T PRK06348 228 TFGSFSKDFAMTGWRIGYVIAP 249 (384)
T ss_pred EEecchhccCCccccceeeecC
Confidence 667889988744 346666653
No 161
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.69 E-value=2.2e-14 Score=147.15 Aligned_cols=159 Identities=16% Similarity=0.110 Sum_probs=103.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
.++|+++||+||..|+.+++.... ++.|.+...+.+|.++...|-+...+....+-. ...+..+|.+
T Consensus 100 ~~~~~~SGs~A~e~al~~a~~~~~---~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 175 (401)
T PRK00854 100 KVLPMNSGAEAVETAIKAVRKWGY---EVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFG- 175 (401)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHH---hccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCC-
Confidence 479999999999999999876410 112332122356666777787655443221100 0123444433
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccc-hhhhh
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEK-YSFVL 149 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~-~~~~~ 149 (448)
|+++|++.+.+ ++++|+++++.+++|.+.| +++|.++|++||+++++|++|.+ ...... +....
T Consensus 176 ----d~~~le~~i~~------~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g-~g~~g~~~~~~~ 244 (401)
T PRK00854 176 ----DAEALEAAITP------NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTG-LGRTGKLLAEEH 244 (401)
T ss_pred ----CHHHHHHHhCC------CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC-CCCCchHhHHhh
Confidence 89999998853 5789999999999999887 99999999999999999999973 221111 11111
Q ss_pred cCCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 150 KGINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 150 ~~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
.++ ..|.++++ |++++-. ..|++..+++
T Consensus 245 ~g~-~~D~~~~~--K~l~gg~~~ig~v~~~~~ 273 (401)
T PRK00854 245 EGI-EADVTLIG--KALSGGFYPVSAVLSNSE 273 (401)
T ss_pred cCC-CCCEEEec--ccccCCccCeEEEEEcHH
Confidence 232 35888774 9887542 3566666443
No 162
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.69 E-value=1.9e-14 Score=147.85 Aligned_cols=159 Identities=19% Similarity=0.152 Sum_probs=107.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
.++|++|||++|..++..++... ..+.+++.+...|.+...+....+.. ..++..+|.++
T Consensus 98 ~v~~~~sgsea~~~al~~~~~~~-----------~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (413)
T cd00610 98 KVFFVNSGTEAVEAALKLARAYT-----------GRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPY 166 (413)
T ss_pred EEEEcCcHHHHHHHHHHHHHHHc-----------CCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCc
Confidence 57899999999999999887531 13445666667787766665544321 11356677653
Q ss_pred ------CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccc
Q psy14299 75 ------RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEK 144 (448)
Q Consensus 75 ------~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~ 144 (448)
+...|+++|++.+++. +.++.+++++...+++|.+.| +++|.++|++||+++++|++|++.......
T Consensus 167 ~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~ 243 (413)
T cd00610 167 RYRPPAELADDLEALEEALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKM 243 (413)
T ss_pred cccchhhHHHHHHHHHHHHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcch
Confidence 2344889999988652 235678888888888898887 999999999999999999998753111111
Q ss_pred hhhhhcCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 145 YSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 145 ~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
......++ ..|.++++ |+++++..+|+++.++
T Consensus 244 ~~~~~~~~-~~d~~t~s--K~l~~g~~~g~~~~~~ 275 (413)
T cd00610 244 FAFEHFGV-EPDIVTLG--KGLGGGLPLGAVLGRE 275 (413)
T ss_pred hhHhhcCC-CCCeEEEc--ccccCccccEEEEEcH
Confidence 01111122 25766554 9998877788887644
No 163
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.68 E-value=1.1e-14 Score=148.25 Aligned_cols=132 Identities=8% Similarity=0.082 Sum_probs=103.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~id 79 (448)
.+++++||++|+..++.+..+ +++.|++++..|......+ ...|+ ++..++.+ +
T Consensus 78 ~~~~~~sG~~Ai~~~l~all~--------------~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi---~v~~v~~~-----~ 135 (394)
T PRK09028 78 GTALYPSGAAAISNALLSFLK--------------AGDHLLMVDSCYEPTRDLCDKILKGFGI---ETTYYDPM-----I 135 (394)
T ss_pred cEEEECCHHHHHHHHHHHHhC--------------CCCEEEEECCCcHHHHHHHHHhhhhcce---EEEEECCC-----C
Confidence 578999999998888766543 6677888888887766533 23444 56555533 5
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
.+.+++++++ ++++|++++++|++|.+.|+++|+++||++|++++||.+|+.+....+ .. + ++|+++
T Consensus 136 ~e~l~~~l~~------~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~P-l~-----~-GaDivv 202 (394)
T PRK09028 136 GEGIRELIRP------NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINSRP-FE-----M-GVDISI 202 (394)
T ss_pred HHHHHHhcCc------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccccCCc-cc-----c-CceEEE
Confidence 6778888754 589999999999999999999999999999999999999987653211 11 1 589999
Q ss_pred ECCccccCCCC
Q psy14299 160 WNPHKMLGAPL 170 (448)
Q Consensus 160 ~s~hK~l~~P~ 170 (448)
.|.|||+++|.
T Consensus 203 ~S~tK~l~Gh~ 213 (394)
T PRK09028 203 QAATKYIVGHS 213 (394)
T ss_pred EeCCeEecCCC
Confidence 99999999984
No 164
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.68 E-value=1.7e-14 Score=147.63 Aligned_cols=156 Identities=19% Similarity=0.181 Sum_probs=108.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CC-C-cCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RG-Q-MIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g-~-id~ 80 (448)
..++|+|+|+++.+++..... +++.|+++...+..+...++..|. ++..++.+. ++ . .++
T Consensus 90 ~i~~t~G~~~al~~~~~~l~~--------------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~~~~ 152 (397)
T PRK07568 90 EILITNGGSEAILFAMMAICD--------------PGDEILVPEPFYANYNGFATSAGV---KIVPVTTKIEEGFHLPSK 152 (397)
T ss_pred eEEEcCChHHHHHHHHHHhcC--------------CCCEEEEecCCCccHHHHHHHcCC---EEEEeecCcccCCCCCCH
Confidence 468999999998877765433 566788887777777777788888 788888753 33 3 367
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhh--hhcCCCCc
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF--VLKGINRA 155 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~--~~~~~~~a 155 (448)
++|++++++ ++++|++++++|+||.+.+ +++|+++|+++|+++++|++++........... .+.+...-
T Consensus 153 ~~l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~ 226 (397)
T PRK07568 153 EEIEKLITP------KTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDR 226 (397)
T ss_pred HHHHHhcCc------cceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCC
Confidence 889888754 4788999999999998875 788999999999999999998854331111111 01111111
Q ss_pred cEEEECCccccCCC-CceEEEEEeccch
Q psy14299 156 NSVSWNPHKMLGAP-LQCSILLIKEKGL 182 (448)
Q Consensus 156 D~~~~s~hK~l~~P-~g~G~l~vr~~~~ 182 (448)
-+++.|.+|.++.| .-+|+++..++++
T Consensus 227 ~i~~~S~SK~~~~~G~R~G~~~~~~~~~ 254 (397)
T PRK07568 227 VIIIDSVSKRYSACGARIGCLISKNKEL 254 (397)
T ss_pred EEEEecchhhccCCCcceEEEecCCHHH
Confidence 25667899988754 4477766644443
No 165
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.68 E-value=2e-14 Score=146.49 Aligned_cols=149 Identities=13% Similarity=0.006 Sum_probs=109.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++.+++.+... +++.|+++...+..+...++..|. ++..++.++++.+|+++|
T Consensus 105 ~I~~t~Ga~~~i~~~~~~~~~--------------~gd~Vlv~~P~y~~y~~~~~~~g~---~~~~v~~~~~~~~d~~~l 167 (380)
T PLN03026 105 NILVGCGADELIDLLMRCVLD--------------PGDKIIDCPPTFGMYVFDAAVNGA---EVIKVPRTPDFSLDVPRI 167 (380)
T ss_pred hEEEcCCHHHHHHHHHHHhcC--------------CCCEEEEcCCChHHHHHHHHHcCC---EEEEeecCCCCCcCHHHH
Confidence 468899999998777655433 566788888888778788888888 788999877889999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++.+.. .++++|++++++|+||.+.|.+++.++++.. +++++|++|.-.... ......+... .-.+++.++.
T Consensus 168 ~~~~~~-----~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~-~~~~~~~~~~-~~viv~~SfS 239 (380)
T PLN03026 168 VEAVET-----HKPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQ-ESRMKWVKKY-DNLIVLRTFS 239 (380)
T ss_pred HHHHhc-----cCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCC-cchHHHHHhC-CCEEEEecch
Confidence 998843 2578999999999999999999999999865 999999998643221 0000111111 1236778999
Q ss_pred cccCCC-CceEEEEE
Q psy14299 164 KMLGAP-LQCSILLI 177 (448)
Q Consensus 164 K~l~~P-~g~G~l~v 177 (448)
|.++.| .-+|+++.
T Consensus 240 K~~glaGlRiGy~~~ 254 (380)
T PLN03026 240 KRAGLAGLRVGYGAF 254 (380)
T ss_pred HhhcCccccceeeec
Confidence 988744 23566554
No 166
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.68 E-value=1.8e-14 Score=147.24 Aligned_cols=147 Identities=11% Similarity=0.040 Sum_probs=110.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHH-hCCCCCcEEEEecCCCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHW-LGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~-~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
.++.+++|++++..++.+... +++.|+++...|.+....... ...-..++..++. .|+++
T Consensus 78 ~~i~~~sG~~Ai~~~l~all~--------------~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~-----~d~e~ 138 (388)
T PRK07811 78 YGRAFSSGMAATDCLLRAVLR--------------PGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL-----SDLDA 138 (388)
T ss_pred ceEEeCCHHHHHHHHHHHHhC--------------CCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC-----CCHHH
Confidence 356778889998888876643 567788898888865544332 2111114555543 48999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
+++++++ ++++|+++.++|++|.+.|+++|+++||++|+++++|++++.+....+. . .++|+++.|+
T Consensus 139 l~~~i~~------~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~------~-~gaDivv~S~ 205 (388)
T PRK07811 139 VRAAITP------RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPL------A-LGADVVVHST 205 (388)
T ss_pred HHHhcCc------CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCch------h-hCCcEEEecC
Confidence 9998854 5889999999999999999999999999999999999999876542211 1 1479999999
Q ss_pred ccccCCCCc--eEEEEEeccch
Q psy14299 163 HKMLGAPLQ--CSILLIKEKGL 182 (448)
Q Consensus 163 hK~l~~P~g--~G~l~vr~~~~ 182 (448)
+|++++|.+ .|+++++++.+
T Consensus 206 sK~l~g~~~~~gG~vv~~~~~l 227 (388)
T PRK07811 206 TKYIGGHSDVVGGALVTNDEEL 227 (388)
T ss_pred ceeecCCCCcEEEEEEECCHHH
Confidence 999998875 57777766544
No 167
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.68 E-value=1.4e-14 Score=146.30 Aligned_cols=151 Identities=13% Similarity=0.035 Sum_probs=110.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++..++.+..+ +++.|+++...+..+...+...|. ++..+|.+ ++.+|++++
T Consensus 83 ~i~~t~G~~~~l~~~~~~~~~--------------~gd~v~~~~p~y~~~~~~~~~~g~---~~~~~~~~-~~~~d~~~l 144 (359)
T PRK03158 83 QLLFGAGLDEVIQMISRALLN--------------PGTNTVMAEPTFSQYRHNAIIEGA---EVREVPLK-DGGHDLEAM 144 (359)
T ss_pred HEEECCCHHHHHHHHHHHHhC--------------CCCEEEEcCCCHHHHHHHHHHcCC---eEEEEecC-CCCcCHHHH
Confidence 468899999997666555433 566788888888888888888888 78899987 678999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHH--cCCEEEEeccccccccccc--chhhhhcCCCCccEEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEK--YDLWMHVDACWGGSLIFSE--KYSFVLKGINRANSVS 159 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~--~g~~l~VD~A~~~~~~~~~--~~~~~~~~~~~aD~~~ 159 (448)
++.+++ +++++++++++|+||.+.|.++|.++++. +|+++++|++|........ ..-...... .-.+++
T Consensus 145 ~~~~~~------~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~vi~~ 217 (359)
T PRK03158 145 LKAIDE------QTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKY-ENLIVL 217 (359)
T ss_pred HHhcCC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhc-CCEEEE
Confidence 887743 47788889999999999999999999987 5999999999875443111 000011111 124666
Q ss_pred ECCccccCCC-CceEEEEEec
Q psy14299 160 WNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 160 ~s~hK~l~~P-~g~G~l~vr~ 179 (448)
.++.|.++.| .-+|+++..+
T Consensus 218 ~S~SK~~g~~GlRiG~~v~~~ 238 (359)
T PRK03158 218 RTFSKAYGLAALRVGYGIASE 238 (359)
T ss_pred EechHhhcCcchhhehhcCCH
Confidence 7899988755 2347766533
No 168
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.68 E-value=1.9e-14 Score=147.06 Aligned_cols=143 Identities=11% Similarity=0.049 Sum_probs=109.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHH----HHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLK----AAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~----~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..++|+||++|+..++.+... +++.|+++...|.+... .+...|+ +++.++.+ |
T Consensus 78 ~~v~~ssG~~Ai~~al~al~~--------------~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~---~v~~vd~~-----d 135 (390)
T PRK08133 78 ACVATASGMAAILAVVMALLQ--------------AGDHVVSSRSLFGSTVSLFEKIFARFGI---ETTFVDLT-----D 135 (390)
T ss_pred cEEEECCHHHHHHHHHHHHhC--------------CCCEEEEccCcchhHHHHHHHHHHHcCc---EEEEECCC-----C
Confidence 468999999999888776543 56778889888876543 3445676 68888765 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++++++|++|.+.|+++|.++||+||+++++|++++.+....+. . .++|+++
T Consensus 136 ~~~l~~~i~~------~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~pl------~-~g~Divv 202 (390)
T PRK08133 136 LDAWRAAVRP------NTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQPL------K-LGADVVI 202 (390)
T ss_pred HHHHHHhcCc------CCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCCch------h-hCCcEEE
Confidence 8999988854 5889999999999999999999999999999999999998765442211 0 1479999
Q ss_pred ECCccccCCCCc-eEEEEEeccc
Q psy14299 160 WNPHKMLGAPLQ-CSILLIKEKG 181 (448)
Q Consensus 160 ~s~hK~l~~P~g-~G~l~vr~~~ 181 (448)
.|+||+++++.. .|.+++.+++
T Consensus 203 ~S~sK~~~g~g~~~GG~vv~~~~ 225 (390)
T PRK08133 203 HSATKYLDGQGRVLGGAVVGSKE 225 (390)
T ss_pred eecceeecCCcceEeEEEEcCHH
Confidence 999999987753 3344443433
No 169
>PRK10534 L-threonine aldolase; Provisional
Probab=99.68 E-value=1.7e-15 Score=151.36 Aligned_cols=157 Identities=16% Similarity=0.161 Sum_probs=102.1
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH--HHHhC-CCCCcEEEEecCCCCCcCHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA--AHWLG-IGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~--~~~~g-~~~~~v~~v~~~~~g~id~e 81 (448)
.++++||++++++++.+... +++.|+++...|.+..+. +...+ . .++.++.++++.+|++
T Consensus 52 ~~v~~~g~~a~~~~l~~~~~--------------~gd~vi~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~d~~ 114 (333)
T PRK10534 52 ALFLPTGTQANLVALLSHCE--------------RGEEYIVGQAAHNYLYEAGGAAVLGSI---QPQPIDAAADGTLPLD 114 (333)
T ss_pred EEEeCchHHHHHHHHHHhcC--------------CCCeeEEechhhhhHhcCCchHHhcCc---eEEeecCCCCCCCCHH
Confidence 47999999999888876533 556677887788654432 34443 3 5667777778999999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHH---HHHHHHHcCCEEEEecccccccccc-cchhhhhcCCCCccE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDE---IATVCEKYDLWMHVDACWGGSLIFS-EKYSFVLKGINRANS 157 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~---I~~ia~~~g~~l~VD~A~~~~~~~~-~~~~~~~~~~~~aD~ 157 (448)
+|++++.+......++++|++++++ +|.+.|.++ |.++|++||++++||+||..+.... +.....+. ...|.
T Consensus 115 ~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~--~~~~~ 190 (333)
T PRK10534 115 KVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEIT--QYCDS 190 (333)
T ss_pred HHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHH--hcCCE
Confidence 9999885421111146788887544 599877655 5678899999999999876332110 11001111 12466
Q ss_pred EEECCccccCCCCceEEEEEeccchhh
Q psy14299 158 VSWNPHKMLGAPLQCSILLIKEKGLLH 184 (448)
Q Consensus 158 ~~~s~hK~l~~P~g~G~l~vr~~~~~~ 184 (448)
++++++|.++.+ .|.+.+.++++..
T Consensus 191 ~~~s~SK~~~~~--~G~~~~~~~~~i~ 215 (333)
T PRK10534 191 FTICLSKGLGTP--VGSLLVGNRDYIK 215 (333)
T ss_pred EEEEeEcCCCCc--ccceEEcCHHHHH
Confidence 777899988876 5644444555443
No 170
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.68 E-value=1.2e-14 Score=148.19 Aligned_cols=149 Identities=11% Similarity=-0.008 Sum_probs=109.4
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICSF 82 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e~ 82 (448)
.++|+|+++++..++..... +++.|+++...+..+...++..|. +++.+|.++ ++.+|+++
T Consensus 96 ii~t~G~~~~i~~~~~~~~~--------------~gd~Vl~~~P~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~d~~~ 158 (385)
T PRK09276 96 VISLIGSKEGIAHIPLAFVN--------------PGDVVLVPDPGYPVYKIGTIFAGG---EPYFMPLKEENGFLPDLDA 158 (385)
T ss_pred EEEccCcHHHHHHHHHHhCC--------------CCCEEEEcCCCCcChHHHHHHcCC---EEEEEecCCCCCCcCCHHH
Confidence 67789999998777665543 567788999999888888998898 788888864 35689999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhh--hhcCCCCccE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF--VLKGINRANS 157 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~--~~~~~~~aD~ 157 (448)
+++.+.+ ++++|++++++|+||.+.+ +++|+++|++||+++++|.+|+........... ...+.....+
T Consensus 159 l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i 232 (385)
T PRK09276 159 IPEDVAK------KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGI 232 (385)
T ss_pred HHHhccc------cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEE
Confidence 9887753 5789999999999999877 588899999999999999998854331100000 0111112236
Q ss_pred EEECCccccCCCCc--eEEEEE
Q psy14299 158 VSWNPHKMLGAPLQ--CSILLI 177 (448)
Q Consensus 158 ~~~s~hK~l~~P~g--~G~l~v 177 (448)
+..++.|.++.| | +|+++.
T Consensus 233 ~~~S~SK~~g~~-GlRiG~~i~ 253 (385)
T PRK09276 233 EFHSLSKTYNMT-GWRIGFAVG 253 (385)
T ss_pred EEecchhhcCCc-chhheeeeC
Confidence 667888988644 4 677665
No 171
>PLN02656 tyrosine transaminase
Probab=99.68 E-value=2.2e-14 Score=147.71 Aligned_cols=151 Identities=13% Similarity=0.071 Sum_probs=110.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|+|+++.+++.+... +++.|++++..|..+...++..|+ ++..++.++ ++.+|++
T Consensus 98 ~i~~t~G~~~al~~~~~~l~~--------------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~ 160 (409)
T PLN02656 98 DVFITSGCTQAIDVALSMLAR--------------PGANILLPRPGFPIYELCAAFRHL---EVRYVDLLPEKGWEVDLD 160 (409)
T ss_pred cEEEeCChHHHHHHHHHHHhC--------------CCCeEEEeCCCCCcHHHHHHHcCC---EEEEEeCCCcCCCCCCHH
Confidence 578999999998877766543 567789999999888888888888 788888753 4689999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHcCCEEEEecccccccccccchhh--hhcCCCCcc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF--VLKGINRAN 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~--~~~~~~~aD 156 (448)
++++.+++ ++++|++++++|+||.+ .++++|+++|++||+++++|++|+...+....... .+.... -=
T Consensus 161 ~l~~~~~~------~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-~v 233 (409)
T PLN02656 161 AVEALADQ------NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIV-PV 233 (409)
T ss_pred HHHHHhcc------CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccC-cE
Confidence 99988754 47889999999999988 56899999999999999999998854432111000 011100 11
Q ss_pred EEEECCccccCCC-CceEEEEEe
Q psy14299 157 SVSWNPHKMLGAP-LQCSILLIK 178 (448)
Q Consensus 157 ~~~~s~hK~l~~P-~g~G~l~vr 178 (448)
+++.|+.|.++.| .-+|+++..
T Consensus 234 i~~~SfSK~f~~pGlRiG~~i~~ 256 (409)
T PLN02656 234 LTLGSLSKRWIVPGWRLGWFVTT 256 (409)
T ss_pred EEEcccchhccCcceeEEEEEEe
Confidence 4556889986555 456666653
No 172
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.67 E-value=2.2e-14 Score=148.66 Aligned_cols=148 Identities=15% Similarity=0.140 Sum_probs=110.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++.+++.+..+ +++.|+++...+..+...++..|. +++.+|.++++ +|+++|
T Consensus 143 ~Iiit~G~~~al~~~~~~l~~--------------pgd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~g-~~~~~l 204 (431)
T PRK15481 143 EIDLTSGAIDAIERLLCAHLL--------------PGDSVAVEDPCFLSSINMLRYAGF---SASPVSVDAEG-MQPEKL 204 (431)
T ss_pred eEEEecCcHHHHHHHHHHhCC--------------CCCEEEEeCCCcHHHHHHHHHcCC---eEEeeccCCCC-CCHHHH
Confidence 578999999998888776544 667899999999999999999999 78999987665 899999
Q ss_pred HHHHHHhhhcCCCcEEEEEe-ccCCccccccCHH---HHHHHHHHc-CCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNAT-AGTTVLGAFDPLD---EIATVCEKY-DLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~-~~~t~tG~~~~l~---~I~~ia~~~-g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
++++++ ++++++++ .++|+||...+.+ +|.++|++| ++++++|.+|+-.... + ....+.....--++
T Consensus 205 ~~~~~~------~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~-~-~~~~~~~~~~~vi~ 276 (431)
T PRK15481 205 ERALAQ------GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSS-P-YHSVIPQTTQRWAL 276 (431)
T ss_pred HHHHhc------CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccC-C-CCCCCcCCCCCEEE
Confidence 998854 36777776 8999999998876 899999999 9999999998754321 1 00101111111266
Q ss_pred EECCccccCCCCceEEEEE
Q psy14299 159 SWNPHKMLGAPLQCSILLI 177 (448)
Q Consensus 159 ~~s~hK~l~~P~g~G~l~v 177 (448)
+.|+.|.++.-.-+|+++.
T Consensus 277 ~~SfSK~~~~GlRiG~~i~ 295 (431)
T PRK15481 277 IRSVSKALGPDLRLAFVAS 295 (431)
T ss_pred EeeeccccCCCceeEEEeC
Confidence 6788999882234555444
No 173
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=2.5e-14 Score=147.68 Aligned_cols=142 Identities=14% Similarity=0.021 Sum_probs=109.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH----HHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML----KAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~----~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++|+.|+..++..... +++.|+++...|.+.. +.+...|+ ++..++ ++ .|
T Consensus 86 ~~v~fsSG~~Ai~~al~~ll~--------------~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi---~v~~vd-~~---~d 144 (437)
T PRK05613 86 HAVAFASGQAAETAAILNLAG--------------AGDHIVTSPRLYGGTETLFLVTLNRLGI---EVTFVE-NP---DD 144 (437)
T ss_pred eEEEeCCHHHHHHHHHHHhcC--------------CCCEEEECCCccHHHHHHHHHHHHhcCe---EEEEEC-CC---CC
Confidence 467888888888776654422 6778999999999874 33355566 677776 22 28
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++.+.+|++|.+.|+++|+++||++|+.++||++++.+....+ .. + ++|+++
T Consensus 145 ~e~l~~~l~~------~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~~p-~~-----~-GaDivv 211 (437)
T PRK05613 145 PESWQAAVQP------NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALVRP-LE-----L-GADVVV 211 (437)
T ss_pred HHHHHHhCCc------cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccccCh-HH-----h-CCCEEE
Confidence 8999999865 478888999999999999999999999999999999999987765321 11 1 479999
Q ss_pred ECCccccCCCC-ceEEEEEec
Q psy14299 160 WNPHKMLGAPL-QCSILLIKE 179 (448)
Q Consensus 160 ~s~hK~l~~P~-g~G~l~vr~ 179 (448)
+|+||+++++. +.|.+++.+
T Consensus 212 ~S~~K~l~G~gd~~gG~vv~~ 232 (437)
T PRK05613 212 ASLTKFYTGNGSGLGGVLIDG 232 (437)
T ss_pred eeccceecCCCcceeEEEEec
Confidence 99999998774 456666644
No 174
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.67 E-value=1.3e-14 Score=147.11 Aligned_cols=142 Identities=17% Similarity=0.093 Sum_probs=102.2
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH----HhCCCCCcEEEEecCCCCCc
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH----WLGIGMDNVIRVKTNERGQM 78 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~----~~g~~~~~v~~v~~~~~g~i 78 (448)
...+++++|+.++..++.+... +++.|+++...|......+. ..|+ +++.++.++++
T Consensus 66 ~~~v~~~sG~~Ai~~~l~all~--------------~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~---~v~~v~~~~~~-- 126 (366)
T PRK07582 66 AEALVFPSGMAAITAVLRALLR--------------PGDTVVVPADGYYQVRALAREYLAPLGV---TVREAPTAGMA-- 126 (366)
T ss_pred CCEEEECCHHHHHHHHHHHhcC--------------CCCEEEEeCCCcHhHHHHHHHHHhcCeE---EEEEECCCChH--
Confidence 3578889999988777655432 66778888788877665443 3455 68888765321
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
+ .+. .++++|++..++|++|.+.|+++|+++||++|++++||++|+...... + +. + .+|++
T Consensus 127 -----~-~~~------~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~---p--~~-~-g~Div 187 (366)
T PRK07582 127 -----E-AAL------AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQR---P--LE-L-GADLV 187 (366)
T ss_pred -----H-Hhc------cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccccC---c--hh-c-CCcEE
Confidence 1 111 247899999999999999999999999999999999999986322111 1 11 1 47999
Q ss_pred EECCccccCCCCce--EEEEEeccch
Q psy14299 159 SWNPHKMLGAPLQC--SILLIKEKGL 182 (448)
Q Consensus 159 ~~s~hK~l~~P~g~--G~l~vr~~~~ 182 (448)
+.|+|||+++|.|+ |+++.+++++
T Consensus 188 v~S~sK~l~G~~g~~~G~v~~~~~~l 213 (366)
T PRK07582 188 VASDTKALTGHSDLLLGYVAGRDPEL 213 (366)
T ss_pred EecccccccCCCCeeEEEEEcCcHHH
Confidence 99999999999884 7666655443
No 175
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.67 E-value=6e-14 Score=144.57 Aligned_cols=150 Identities=12% Similarity=0.102 Sum_probs=111.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|+++++.+++.+... +++.|+++..+|..+...++..|+ ++..++.++ ++.+|++
T Consensus 106 ~i~it~G~~~al~~~~~~~~~--------------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~ 168 (412)
T PTZ00433 106 NVVLCSGVSHAILMALTALCD--------------EGDNILVPAPGFPHYETVCKAYGI---EMRFYNCRPEKDWEADLD 168 (412)
T ss_pred hEEEeCChHHHHHHHHHHhcC--------------CCCEEEEccCCcccHHHHHHHcCC---EEEEEecCccccCcCCHH
Confidence 478999999998888776543 567788999999999999999998 788888753 5689999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCC-Ccc-
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGIN-RAN- 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~-~aD- 156 (448)
+|++.+.+ ++++|++++++|+||...+ +++|.++|++||+++++|++|............ +..+. ..+
T Consensus 169 ~l~~~~~~------~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~~ 241 (412)
T PTZ00433 169 EIRRLVDD------RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTS-VADFDTTVPR 241 (412)
T ss_pred HHHHHhcc------CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccc-hhhccCCCce
Confidence 99988754 4788999999999997654 788899999999999999998754331111000 11111 111
Q ss_pred EEEECCccccCCC-CceEEEEE
Q psy14299 157 SVSWNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 157 ~~~~s~hK~l~~P-~g~G~l~v 177 (448)
+++.|+.|.++.| .-+|++++
T Consensus 242 i~~~SfSK~~~~pGlRlG~~i~ 263 (412)
T PTZ00433 242 VILGGTAKNLVVPGWRLGWLLL 263 (412)
T ss_pred EEEccchhhcCCCCeeEEEEEE
Confidence 4566889988655 55777765
No 176
>PRK09105 putative aminotransferase; Provisional
Probab=99.67 E-value=1.4e-14 Score=147.10 Aligned_cols=153 Identities=14% Similarity=0.100 Sum_probs=110.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++..++.+... +++.|++++.+|..+...++..|. +++.+|.++++.+|++.+
T Consensus 97 ~I~it~Gs~~ai~~~~~~l~~--------------~gd~Vli~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l 159 (370)
T PRK09105 97 HVMAYAGSSEPLNYAVLAFTS--------------PTAGLVTADPTYEAGWRAADAQGA---PVAKVPLRADGAHDVKAM 159 (370)
T ss_pred hEEEcCChHHHHHHHHHHHcC--------------CCCEEEEeCCChHHHHHHHHHcCC---eEEEecCCCCCCCCHHHH
Confidence 467899999998888766543 566788899999999999999998 788999888888999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHH--cCCEEEEecccccccccccchhhhhcCCCCccEEE-E
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEK--YDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS-W 160 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~--~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~-~ 160 (448)
++.. .+++++++++++|+||.+.+.++|.++++. +++++++|++|.-... .+... .+... ..++++ .
T Consensus 160 ~~~~-------~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~-~~s~~-~~~~~-~~~vi~~~ 229 (370)
T PRK09105 160 LAAD-------PNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSD-APSVV-DLVAQ-RKDLIVLR 229 (370)
T ss_pred HhcC-------CCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhcc-CcchH-HHHhh-CCCEEEEe
Confidence 7652 246789999999999999999998888754 4899999999853211 11000 01111 234555 4
Q ss_pred CCccccCCC-CceEEEEEeccchhh
Q psy14299 161 NPHKMLGAP-LQCSILLIKEKGLLH 184 (448)
Q Consensus 161 s~hK~l~~P-~g~G~l~vr~~~~~~ 184 (448)
|+.|.++.| .-+|+++.. ++...
T Consensus 230 SfSK~~g~~GlRiG~~v~~-~~~i~ 253 (370)
T PRK09105 230 TFSKLYGMAGMRLGLAAAR-PDLLA 253 (370)
T ss_pred cccHhhcCCccceeeeecC-HHHHH
Confidence 777887644 237777663 34433
No 177
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.67 E-value=9.6e-16 Score=136.63 Aligned_cols=149 Identities=23% Similarity=0.278 Sum_probs=117.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH-HHHHHhCCCCCcEEEEecCCCCCcCHH-
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML-KAAHWLGIGMDNVIRVKTNERGQMICS- 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~-~~~~~~g~~~~~v~~v~~~~~g~id~e- 81 (448)
.+++++|||+++..++.+++. ++..|++++..|.+.. ..+...|. +++.++.+.++..+.+
T Consensus 19 ~~~~~~~~t~a~~~~~~~~~~--------------~~~~v~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~ 81 (170)
T cd01494 19 KAVFVPSGTGANEAALLALLG--------------PGDEVIVDANGHGSRYWVAAELAGA---KPVPVPVDDAGYGGLDV 81 (170)
T ss_pred cEEEeCCcHHHHHHHHHHhCC--------------CCCEEEEeecccceehhhHHHhcCC---EEEEeccCCCCccchhh
Confidence 578999999999999887654 3456888889999888 77777787 7888888765543332
Q ss_pred -HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 82 -FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 82 -~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
.+++... ..++.+++++++++++|...|+++|.++|+++|+++|+|++++.+........ .. ...+|+++.
T Consensus 82 ~~~~~~~~-----~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~-~~~~d~~~~ 153 (170)
T cd01494 82 AILEELKA-----KPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVL--IP-EGGADVVTF 153 (170)
T ss_pred hhhhhccc-----cCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccc--cc-cccCCEEEE
Confidence 4433322 24689999999999999999999999999999999999999998877542211 11 135899999
Q ss_pred CCccccCCCCceEEEEEe
Q psy14299 161 NPHKMLGAPLQCSILLIK 178 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr 178 (448)
|+||++++ +++|++++|
T Consensus 154 s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 154 SLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred EcccccCC-CceEEEEeC
Confidence 99999998 789998875
No 178
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.67 E-value=5.2e-14 Score=144.48 Aligned_cols=152 Identities=16% Similarity=0.100 Sum_probs=110.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|+++++.+++.+... +++.|+++...+..+...++..|. ++..++.+. ++.+|++
T Consensus 97 ~i~~t~G~~~al~~~~~~l~~--------------~gd~v~i~~P~y~~~~~~~~~~g~---~v~~~~~~~~~~~~~d~~ 159 (401)
T TIGR01264 97 DVVLCSGCSHAIEMCIAALAN--------------AGQNILVPRPGFPLYETLAESMGI---EVKLYNLLPDKSWEIDLK 159 (401)
T ss_pred HEEECcChHHHHHHHHHHhCC--------------CCCEEEEeCCCChhHHHHHHHcCC---EEEEeecCCccCCCCCHH
Confidence 367899999998887766543 456788888888888888898888 788887753 4689999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCC-cc-
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINR-AN- 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~-aD- 156 (448)
.+++.+++ ++++|++++++|+||...+ +++|.++|+++|+++++|++|............ +..+.. ..
T Consensus 160 ~l~~~~~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~v 232 (401)
T TIGR01264 160 QLESLIDE------KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEP-LASLSSTVPI 232 (401)
T ss_pred HHHHHhcc------CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCccccc-HHHcCCCCcE
Confidence 99988754 3678899999999998865 888999999999999999998854431111111 111111 11
Q ss_pred EEEECCccccCCC-CceEEEEEec
Q psy14299 157 SVSWNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 157 ~~~~s~hK~l~~P-~g~G~l~vr~ 179 (448)
+++.|+.|.++.| .-+|++++.+
T Consensus 233 i~~~SfSK~~~~~GlRiG~iv~~~ 256 (401)
T TIGR01264 233 LSCGGLAKRWLVPGWRLGWIIIHD 256 (401)
T ss_pred EEEccCcccCCCccceEEEEEecC
Confidence 5667889975554 3477776643
No 179
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.67 E-value=5.3e-14 Score=144.31 Aligned_cols=144 Identities=12% Similarity=0.038 Sum_probs=107.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH----HHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML----KAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~----~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++|+.++.+++.+..+ +++.|+++...|.... ..++..|+ ++..++. .|
T Consensus 77 ~~v~~~sG~~Ai~~~l~all~--------------pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~---~v~~v~~-----~d 134 (405)
T PRK08776 77 GGVITATGMGAINLVLNALLQ--------------PGDTLVVPHDAYGGSWRLFNALAKKGHF---ALITADL-----TD 134 (405)
T ss_pred ceEEEcCHHHHHHHHHHHHhC--------------CCCEEEEccCCchHHHHHHHHHHHhcCc---EEEEECC-----CC
Confidence 468889999888777665533 6677888877777633 33333344 5666654 38
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++++++|++|.+.|+++|+++|+++|++++||++|..+....+ . . . ++|+++
T Consensus 135 ~~~l~~~i~~------~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~p-l----~-~-gaDivv 201 (405)
T PRK08776 135 PRSLADALAQ------SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKP-L----E-F-GADLVL 201 (405)
T ss_pred HHHHHHhcCc------CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCc-c----c-c-cCCEEE
Confidence 8999988854 478999999999999999999999999999999999999986543211 1 1 1 479999
Q ss_pred ECCccccCCCCc--eEEEEEeccch
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKEKGL 182 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~~~~ 182 (448)
.|+||++++|.+ .|+++.+++++
T Consensus 202 ~S~tK~l~g~~~~~~G~vv~~~~~l 226 (405)
T PRK08776 202 HSTTKYINGHSDVVGGAVVARDAEL 226 (405)
T ss_pred ecCceeecCCCCceEEEEEeCCHHH
Confidence 999999999876 46665655543
No 180
>PRK07683 aminotransferase A; Validated
Probab=99.66 E-value=5.1e-14 Score=143.91 Aligned_cols=151 Identities=12% Similarity=0.048 Sum_probs=111.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e~ 82 (448)
..++|+|+++++.+++.+... +++.|+++...+..+...++..|. +++.++.++ +..+|+++
T Consensus 91 ~I~~t~G~~~al~~~~~~l~~--------------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~ 153 (387)
T PRK07683 91 EIIVTIGASEAIDIAFRTILE--------------PGTEVILPAPIYPGYEPIIRLCGA---KPVFIDTRSTGFRLTAEA 153 (387)
T ss_pred cEEEeCChHHHHHHHHHHhCC--------------CCCEEEEcCCCccchHHHHHHcCC---EEEEeecCcccCCCCHHH
Confidence 579999999998877765433 566788898888888888888888 788888865 45778999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhc--CCCCccE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK--GINRANS 157 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~--~~~~aD~ 157 (448)
+++.+.+ +++++++++++|+||...+ +++|+++|+++|+++++|++|......-+. ..... +...-.+
T Consensus 154 l~~~~~~------~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~-~~~~~~~~~~~~vi 226 (387)
T PRK07683 154 LENAITE------KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPH-TSIAHFPEMREKTI 226 (387)
T ss_pred HHHhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCc-CChhhccCCcCCeE
Confidence 9998754 4789999999999998755 888999999999999999998865432111 11111 1111246
Q ss_pred EEECCccccCCC-CceEEEEEe
Q psy14299 158 VSWNPHKMLGAP-LQCSILLIK 178 (448)
Q Consensus 158 ~~~s~hK~l~~P-~g~G~l~vr 178 (448)
++.++.|.++.| .-+|+++..
T Consensus 227 ~~~s~SK~~~~pGlRiG~i~~~ 248 (387)
T PRK07683 227 VINGLSKSHSMTGWRIGFLFAP 248 (387)
T ss_pred EEeeccccccCccceeEEEEcC
Confidence 678899999866 235666553
No 181
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.66 E-value=3.5e-14 Score=146.60 Aligned_cols=142 Identities=15% Similarity=0.125 Sum_probs=110.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH----HHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML----KAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~----~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
.+++|++|+.++..++..... +++.|+++...|.... ..++..|+ +++.++.. |
T Consensus 81 ~al~~~sG~~Ai~~al~~ll~--------------~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv---~v~~vd~~-----d 138 (431)
T PRK08248 81 GALAVSSGQAAITYSILNIAS--------------AGDEIVSSSSLYGGTYNLFAHTLPKLGI---TVKFVDPS-----D 138 (431)
T ss_pred cEEEECCHHHHHHHHHHHHhC--------------CCCEEEEccCchhhHHHHHHHHHHhCCE---EEEEECCC-----C
Confidence 578999999998888766543 5677888888776533 34455666 67788753 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++++++|++|.+.|+++|+++||++|++++||++++.+....+ + . .++|+++
T Consensus 139 ~e~l~~ai~~------~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~~p-----l-~-~gaDivv 205 (431)
T PRK08248 139 PENFEAAITD------KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLLRP-----I-E-HGADIVV 205 (431)
T ss_pred HHHHHHhcCC------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccCCh-----h-H-cCCCEEE
Confidence 9999998854 478999999999999999999999999999999999999885443221 1 1 1589999
Q ss_pred ECCccccCCCCc-eEEEEEecc
Q psy14299 160 WNPHKMLGAPLQ-CSILLIKEK 180 (448)
Q Consensus 160 ~s~hK~l~~P~g-~G~l~vr~~ 180 (448)
.|.||++++|.. +|.+++.+.
T Consensus 206 ~S~tK~lgg~g~~~Gg~v~~~~ 227 (431)
T PRK08248 206 HSATKFIGGHGTSIGGVIVDSG 227 (431)
T ss_pred EcCccccCCCCCceEEEEEeCC
Confidence 999999999863 677666443
No 182
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.66 E-value=2.1e-14 Score=157.30 Aligned_cols=264 Identities=10% Similarity=0.060 Sum_probs=176.6
Q ss_pred eEEEecCCCchHHHHHHH----HhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHH
Q psy14299 41 LCMFTSEDSHYSMLKAAH----WLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLD 116 (448)
Q Consensus 41 ~~Vl~~~~~H~s~~~~~~----~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~ 116 (448)
..|++++..|+......+ ..|+ +++.+ |+++|++.+ .+..|+++.+++ .|.+.|++
T Consensus 154 ~~vlv~~~~hP~~~~v~~t~a~~~g~---~v~~~--------~~~~l~~~~--------~~~~v~~q~Pn~-~G~ied~~ 213 (939)
T TIGR00461 154 NKFFVAKDLHPQTKSVLHTRAKPFGI---EVIVV--------DCSDIKKAV--------DVFGCLLQYPAT-DGSILDYK 213 (939)
T ss_pred CEEEECCCCCcchHHHHHHHHHhcCc---EEEEE--------cHHHHhhcC--------CEEEEEEECCCC-CeEEecHH
Confidence 568999999998775554 4455 56665 345555544 245566666655 99999999
Q ss_pred HHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCccccC-----CCCceEEEEEeccchhhhhccCCc
Q psy14299 117 EIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPHKMLG-----APLQCSILLIKEKGLLHQANATAA 191 (448)
Q Consensus 117 ~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~-----~P~g~G~l~vr~~~~~~~~~~~~~ 191 (448)
+|++++|++|++++++.-.-+.....+.. .+ ++|+++.+.++|+. +|. .|++.++++ +.+. .|
T Consensus 214 ~i~~~~h~~gal~~~~ad~~al~ll~~Pg-----e~-GaDi~vg~~q~fg~p~g~GGP~-aG~~a~~~~-l~r~----lP 281 (939)
T TIGR00461 214 QLIDALHSHKSLVSVAADLMALTLLTPPG-----HY-GADIVLGSSQRFGVPMGYGGPH-AAFFAVKDE-YNRK----MP 281 (939)
T ss_pred HHHHHHHHcCCEEEEEechHHhCCcCCHH-----Hc-CCcEEeeCCCccCCCCCCCCCc-eeeeeecHh-hHhh----CC
Confidence 99999999999999965333333322211 11 58999777776543 565 888999775 2222 22
Q ss_pred ccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhh
Q psy14299 192 TYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATA 271 (448)
Q Consensus 192 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (448)
+-+-..+.... +++.-.+ + .+.-++++++.++.|+||+ |++
T Consensus 282 grivG~s~D~~------------G~~~~~l----~---------LqtReqhIrRekAtSNICt-------------~qa- 322 (939)
T TIGR00461 282 GRIVGVSKDAL------------GNTALRL----A---------LQTREQHIRRDKATSNICT-------------AQV- 322 (939)
T ss_pred CCceeEEecCC------------CCcccee----e---------cccccccccccccCcchhH-------------HHH-
Confidence 22211110000 1110000 0 0011356777888888888 222
Q ss_pred hhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceee
Q psy14299 272 ATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTN 351 (448)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~ 351 (448)
..+++....+.+.|.+|++++.++.+.++.++.+.|.+ +|++++ .++.+..
T Consensus 323 ---------------------------L~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~-~G~~~~-~~~fF~~ 373 (939)
T TIGR00461 323 ---------------------------LLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN-DPHELI-NKTWFDT 373 (939)
T ss_pred ---------------------------HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-CCCccc-CCCccce
Confidence 22566677789999999999999999999999999999 599998 6666777
Q ss_pred EEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHH
Q psy14299 352 ICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIE 430 (448)
Q Consensus 352 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~ 430 (448)
+.+.+... ...++.+++.++|+. +.. . . .+.+++|+ +.++|++||+.|++++.
T Consensus 374 ~~v~~~~~-----------------~~~~i~~~~~~~gi~-l~~--~-~---~~~i~~s~--~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 374 LTVKVGNG-----------------ISSELLKAAEEFNIN-LRA--V-D---TTTVGIAL--DETTTKADVENLLKVFD 426 (939)
T ss_pred EEEEeCCC-----------------CHHHHHHHHHHCCCe-eee--c-C---CCEEEEEe--ecCCCHHHHHHHHHHhc
Confidence 77765100 124789999999954 332 1 1 25899999 79999999999999995
No 183
>PRK12414 putative aminotransferase; Provisional
Probab=99.66 E-value=2.9e-14 Score=145.49 Aligned_cols=153 Identities=10% Similarity=0.021 Sum_probs=112.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e~ 82 (448)
..++|+|+++++..++.+... +++.|+++...|..+...++..|. +++.+|.++ ++.+|++.
T Consensus 92 ~i~it~g~~~al~~~~~~l~~--------------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~d~~~ 154 (384)
T PRK12414 92 EVTVIASASEGLYAAISALVH--------------PGDEVIYFEPSFDSYAPIVRLQGA---TPVAIKLSPEDFRVNWDE 154 (384)
T ss_pred cEEEECChHHHHHHHHHHhcC--------------CCCEEEEeCCCccchHHHHHHcCC---EEEEEecCccccccCHHH
Confidence 488999999998877765533 567788899999998888888888 788888874 56899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHcCCEEEEecccccccccccchhhh--hcCCCCccE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFV--LKGINRANS 157 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~--~~~~~~aD~ 157 (448)
|++.+++ ++++|++++++|+||.+ .++++|+++|++||+++++|++|.-..+........ ......--+
T Consensus 155 l~~~l~~------~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i 228 (384)
T PRK12414 155 VAAAITP------RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSV 228 (384)
T ss_pred HHhhcCc------ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEE
Confidence 9998853 47899999999999987 568889999999999999999987543311110000 011111126
Q ss_pred EEECCccccCCCC-ceEEEEEec
Q psy14299 158 VSWNPHKMLGAPL-QCSILLIKE 179 (448)
Q Consensus 158 ~~~s~hK~l~~P~-g~G~l~vr~ 179 (448)
++.|+.|.++.|. -+|+++..+
T Consensus 229 ~~~SfSK~~~~pGlRiG~~v~~~ 251 (384)
T PRK12414 229 IVSSFGKSYHVTGWRVGYCLAPA 251 (384)
T ss_pred EEecccccccCccceEEEEecCH
Confidence 7788999887553 357666543
No 184
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.66 E-value=5.7e-14 Score=143.25 Aligned_cols=147 Identities=14% Similarity=0.060 Sum_probs=109.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH-HhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH-WLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~-~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
..++++||++++..++.+..+ +++.|+++...|.+....+. +...+...+..++ ..|+++
T Consensus 69 ~~i~~~sg~~Ai~~~l~~l~~--------------~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd-----~~d~e~ 129 (386)
T PRK08045 69 GAVLTNTGMSAIHLVTTVFLK--------------PGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD-----QGDEQA 129 (386)
T ss_pred eEEEECCHHHHHHHHHHHHcC--------------CCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-----CCCHHH
Confidence 578899999988877765433 66788889888886554333 3322221444443 258999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
+++++++ ++++|.+++++|++|.+.|+++|.++|+++|++++||++|..+....+ . . .++|+++.|+
T Consensus 130 l~~~l~~------~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~p-l-----~-~gaDivv~S~ 196 (386)
T PRK08045 130 LRAALAE------KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNP-L-----A-LGADLVLHSC 196 (386)
T ss_pred HHHhccc------CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCc-h-----h-hCCCEEEeec
Confidence 9988854 478999999999999999999999999999999999999987654222 1 1 1479999999
Q ss_pred ccccCCCCc--eEEEEEeccch
Q psy14299 163 HKMLGAPLQ--CSILLIKEKGL 182 (448)
Q Consensus 163 hK~l~~P~g--~G~l~vr~~~~ 182 (448)
|||+++|.+ .|++..+++++
T Consensus 197 tK~l~G~~d~~~G~vi~~~~~~ 218 (386)
T PRK08045 197 TKYLNGHSDVVAGVVIAKDPDV 218 (386)
T ss_pred ceeccCCCCceeEEEEeCcHHH
Confidence 999999887 56665555443
No 185
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.66 E-value=4.1e-14 Score=146.07 Aligned_cols=143 Identities=15% Similarity=0.075 Sum_probs=108.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH----HhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH----WLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~----~~g~~~~~v~~v~~~~~g~id 79 (448)
.++++++|+.|+..++.+... +++.|+++...|........ ..|+ +++.++ +. .|
T Consensus 86 ~av~~sSG~aAi~~al~all~--------------~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi---~v~~vd-d~---~d 144 (436)
T PRK07812 86 AALLLASGQAAETFAILNLAG--------------AGDHIVSSPRLYGGTYNLFHYTLPKLGI---EVSFVE-DP---DD 144 (436)
T ss_pred eEEEEccHHHHHHHHHHHHhC--------------CCCEEEEeCCcchHHHHHHHHHhhcCeE---EEEEEC-CC---CC
Confidence 468999999998888866543 56778888888877665433 2344 555554 22 28
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++.+++|++|.+.|+++|+++||++|++++||++++.+....+. . .++|+++
T Consensus 145 ~e~l~~ai~~------~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl-----~--~GaDivv 211 (436)
T PRK07812 145 LDAWRAAVRP------NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLIRPL-----E--HGADIVV 211 (436)
T ss_pred HHHHHHhCCC------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCCch-----h--cCCCEEE
Confidence 8999988854 5789999999999999999999999999999999999999876543221 1 1589999
Q ss_pred ECCccccCCCCc-eEEEEEecc
Q psy14299 160 WNPHKMLGAPLQ-CSILLIKEK 180 (448)
Q Consensus 160 ~s~hK~l~~P~g-~G~l~vr~~ 180 (448)
.|+||+++++.+ +|.+++...
T Consensus 212 ~S~tK~lgg~G~~i~G~vv~~~ 233 (436)
T PRK07812 212 HSATKYLGGHGTAIAGVIVDGG 233 (436)
T ss_pred EecccccCCCCCeEEEEEEcCC
Confidence 999999988743 566666443
No 186
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.66 E-value=5.9e-14 Score=143.77 Aligned_cols=152 Identities=13% Similarity=0.056 Sum_probs=113.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-CCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-GQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-g~id~e~ 82 (448)
..++|+|+++++..++..... +++.|+++...+..+...++..|+ +++.++.+++ +.+|+++
T Consensus 98 ~i~~t~G~~~al~~~~~~l~~--------------~gd~Vli~~p~~~~~~~~~~~~g~---~v~~v~~~~~~~~~d~~~ 160 (394)
T PRK06836 98 HIVMTCGAAGALNVALKAILN--------------PGDEVIVFAPYFVEYRFYVDNHGG---KLVVVPTDTDTFQPDLDA 160 (394)
T ss_pred cEEEeCChHHHHHHHHHHhcC--------------CCCEEEEcCCCCccHHHHHHHcCC---EEEEEecCCccCcCCHHH
Confidence 368999999998777665433 566788898898888888888888 7999998766 6899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHH------cCCEEEEecccccccccccchhhhhcCCC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEK------YDLWMHVDACWGGSLIFSEKYSFVLKGIN 153 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~------~g~~l~VD~A~~~~~~~~~~~~~~~~~~~ 153 (448)
+++++++ ++++|++++++|+||...| +++|+++|++ ||+++++|++|.................
T Consensus 161 l~~~~~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~- 233 (394)
T PRK06836 161 LEAAITP------KTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYY- 233 (394)
T ss_pred HHhhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHcc-
Confidence 9999854 4789999999999999877 6667778898 8999999999875433111111111111
Q ss_pred CccEEEECCccccCCCC-ceEEEEEec
Q psy14299 154 RANSVSWNPHKMLGAPL-QCSILLIKE 179 (448)
Q Consensus 154 ~aD~~~~s~hK~l~~P~-g~G~l~vr~ 179 (448)
.-.++..|+.|.++.|. .+|+++..+
T Consensus 234 ~~~i~~~S~SK~~~~pGlRiG~~~~~~ 260 (394)
T PRK06836 234 DNSIVVYSFSKSLSLPGERIGYIAVNP 260 (394)
T ss_pred CcEEEEecchhhccCcceeeEEEecCH
Confidence 12477789999998653 577777644
No 187
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.66 E-value=1.6e-13 Score=140.73 Aligned_cols=161 Identities=17% Similarity=0.133 Sum_probs=106.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCC---------cEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMD---------NVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~---------~v~~v~~~~ 74 (448)
.++|+++||+||..|+..++.... .+.|++..+..+|......|-+........+.... .+..++.
T Consensus 90 ~~~~~~SGs~A~e~al~~~~~~~~---~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 164 (400)
T PTZ00125 90 KVLPMNSGAEAGETALKFARKWGY---EVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDY-- 164 (400)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHH---hccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCC--
Confidence 478999999999999998875310 11232212345677777788877776665442110 1222222
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccchhhhhc
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
.|+++|++.++. .++++|+++.+.+++|.+.| +++|.++|++||+++++|++|.+.......+.....
T Consensus 165 ---~d~~~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~ 236 (400)
T PTZ00125 165 ---NDVEALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHE 236 (400)
T ss_pred ---CCHHHHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhc
Confidence 289999999852 25788988888899999888 999999999999999999998632111100111112
Q ss_pred CCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 151 GINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
++ ..|.++++ |+++++. .+|+++.+++
T Consensus 237 ~~-~pd~~~~s--K~l~~g~~~ig~v~~~~~ 264 (400)
T PTZ00125 237 GV-KPDIVLLG--KALSGGLYPISAVLANDD 264 (400)
T ss_pred CC-CCCEEEEc--ccccCCCcCcEEEEEcHH
Confidence 33 25877765 9998764 7888877554
No 188
>PLN02509 cystathionine beta-lyase
Probab=99.66 E-value=2.6e-14 Score=148.22 Aligned_cols=142 Identities=14% Similarity=0.085 Sum_probs=107.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~id 79 (448)
.++++++|+.++ .++..+.. +++.|+++...|.+....+ ...|+ ++..++. .|
T Consensus 150 ~ai~~~SG~aAi-~~il~ll~--------------~GD~VI~~~~~y~~t~~ll~~~l~~~G~---~v~~vd~-----~d 206 (464)
T PLN02509 150 RAFCFTSGMAAL-SAVTHLIK--------------NGEEIVAGDDVYGGSDRLLSQVVPRSGV---VVKRVNT-----TN 206 (464)
T ss_pred EEEEeCcHHHHH-HHHHHHhC--------------CCCEEEEcCCchhhHHHHHHHHHHHCCe---EEEEeCC-----CC
Confidence 356778887664 33333222 6778899999998876443 34566 5666654 37
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++.+ ++++|++++++|++|.+.|+++|+++||+||++++||+||+.+....+. + .++|+++
T Consensus 207 ~e~l~~ai~~------~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl------~-~gaDivv 273 (464)
T PLN02509 207 LDEVAAAIGP------QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSRPL------E-LGADIVM 273 (464)
T ss_pred HHHHHHhCCc------CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCChh------h-cCCcEEE
Confidence 8999888853 5789999999999999999999999999999999999999877652211 1 1589999
Q ss_pred ECCccccCCCCc--eEEEEEeccc
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKEKG 181 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~~~ 181 (448)
+|++||+++|.+ .|+++++++.
T Consensus 274 ~S~tK~l~G~gdv~gG~v~~~~~~ 297 (464)
T PLN02509 274 HSATKFIAGHSDVMAGVLAVKGEK 297 (464)
T ss_pred ecCcccccCCCccceeEEEeccHH
Confidence 999999999887 6777776543
No 189
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.65 E-value=1.2e-13 Score=144.50 Aligned_cols=159 Identities=16% Similarity=0.169 Sum_probs=113.1
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH-HhCCCCCcEEEEecC--CCCCcCHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH-WLGIGMDNVIRVKTN--ERGQMICS 81 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~-~~g~~~~~v~~v~~~--~~g~id~e 81 (448)
.++|+|+++++.+.+.+.++ +++.|+++...+..+...+. ..|. +++.+|.+ ++..+|++
T Consensus 114 Iiit~Ga~~al~~l~~~l~~--------------pGd~Vlv~~P~Y~~~~~~~~~~~g~---~~v~v~~~~~~~~~~~~~ 176 (468)
T PLN02450 114 LVLTAGATSANETLMFCLAE--------------PGDAFLLPTPYYPGFDRDLKWRTGV---EIVPIHCSSSNGFQITES 176 (468)
T ss_pred eEEccChHHHHHHHHHHhCC--------------CCCEEEECCCCCCchHHHHhhcCCc---EEEEEecCCccCCcCCHH
Confidence 67888999997777666544 67789999888888877777 4677 78888875 35578999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhh---hhc-----
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF---VLK----- 150 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~---~~~----- 150 (448)
++++++++..+++.++++|+++.++|+||.+.+ +++|.++|++||+++++|.+|+...+..+.... ...
T Consensus 177 ~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~ 256 (468)
T PLN02450 177 ALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLE 256 (468)
T ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccc
Confidence 999999775445567899999999999998876 567788899999999999999864332111100 000
Q ss_pred CC--CCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 151 GI--NRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 151 ~~--~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
+. ..-=.++.++.|.++.| .-+|+++..++
T Consensus 257 ~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~ 289 (468)
T PLN02450 257 NTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDE 289 (468)
T ss_pred cCCCCCcEEEEEeccccCCCCCccEEEEEECCH
Confidence 00 00115567889988644 55777766433
No 190
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.65 E-value=7.2e-14 Score=143.23 Aligned_cols=159 Identities=13% Similarity=0.049 Sum_probs=103.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.++|+++||+||..|+..+|.... ...|.....+.+|.++...|-+...+..+.+-.. ..+..++.+
T Consensus 99 ~~~~~~SGseA~e~Alk~a~~~~~---~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 174 (396)
T PRK04073 99 MVLPMNTGAEAVETAIKAARRWAY---DVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYG- 174 (396)
T ss_pred eEEEcCChHHHHHHHHHHHHHHhh---hccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCC-
Confidence 478999999999999999886410 0012110134456666778877666655544210 012334432
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccchhhhhc
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
|++++++.+++ ++++|+++.+.+++|.+.| +++|.++|++||+++++|++|.+.......+.....
T Consensus 175 ----d~~~l~~~i~~------~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~ 244 (396)
T PRK04073 175 ----DLEALKAAITP------NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWD 244 (396)
T ss_pred ----CHHHHHHhccc------CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhc
Confidence 78899888853 4788999999999998866 899999999999999999998842211111111112
Q ss_pred CCCCccEEEECCccccCCC-CceEEEEEec
Q psy14299 151 GINRANSVSWNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~ 179 (448)
++ ..|++++ .|.++++ ..+|.+..++
T Consensus 245 ~~-~pdi~~~--sK~lg~gg~~ig~~~~~~ 271 (396)
T PRK04073 245 NV-TPDMYIL--GKALGGGVFPISCVAANR 271 (396)
T ss_pred CC-CCCEEEe--cccccCCCCcceEEEEcH
Confidence 22 3677775 5988776 4577776654
No 191
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.65 E-value=4.6e-14 Score=137.80 Aligned_cols=287 Identities=15% Similarity=0.163 Sum_probs=184.5
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC-CCC--CcCHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN-ERG--QMICS 81 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~-~~g--~id~e 81 (448)
.+|++|---++-+++....+ +++.|++....++.+.+.....|. ++...|.- +++ .||.+
T Consensus 86 i~~~p~VVpgi~~~I~~~T~--------------~gd~Vvi~tPvY~PF~~~i~~n~R---~~i~~pL~~~~~~y~iD~~ 148 (388)
T COG1168 86 IVFVPGVVPGISLAIRALTK--------------PGDGVVIQTPVYPPFYNAIKLNGR---KVIENPLVEDDGRYEIDFD 148 (388)
T ss_pred EEEcCcchHhHHHHHHHhCc--------------CCCeeEecCCCchHHHHHHhhcCc---EEEeccccccCCcEEecHH
Confidence 45555555555555544333 677788888899999999988877 78888765 344 67999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHcCCEEEEecccccccccccc-hhhh-hc-CCCCc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKYDLWMHVDACWGGSLIFSEK-YSFV-LK-GINRA 155 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~-~~~~-~~-~~~~a 155 (448)
+||+.+.+ .++++.+++++.|++|.+ ++|.+|+++|++||+.++.|..|.-..+.... .... ++ ....-
T Consensus 149 ~LE~~~~~-----~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~ 223 (388)
T COG1168 149 ALEKAFVD-----ERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADN 223 (388)
T ss_pred HHHHHHhc-----CCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcc
Confidence 99999976 357899999999999966 77999999999999999999987754443211 1100 00 00011
Q ss_pred cEEEECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHH
Q psy14299 156 NSVSWNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 234 (448)
Q Consensus 156 D~~~~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g 234 (448)
-+.+.++.|.+..+ -.++.+++.++....+.... -.....
T Consensus 224 ~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~-l~~~~~-------------------------------------- 264 (388)
T COG1168 224 SITLTSASKTFNLAGLKCAYIIISNRELRAKFLKR-LKRNGL-------------------------------------- 264 (388)
T ss_pred eEEEeeccccccchhhhheeEEecCHHHHHHHHHH-HHHhcC--------------------------------------
Confidence 24556778987765 34555666554321111100 000000
Q ss_pred HHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc
Q psy14299 235 FRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 314 (448)
Q Consensus 235 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (448)
...+..++++..++++ .|..
T Consensus 265 -----------------------------------------------------------~~~n~lg~~A~~aAY~-~G~~ 284 (388)
T COG1168 265 -----------------------------------------------------------HGPSALGIIATEAAYN-QGEP 284 (388)
T ss_pred -----------------------------------------------------------CCCchHHHHHHHHHHH-hchH
Confidence 0001112222223333 3778
Q ss_pred cHHHHHHHHHHHHHHHHHHhhc-CCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEE
Q psy14299 315 GFRHFVDNAVDCSRYFLSQISQ-RPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMI 393 (448)
Q Consensus 315 G~~~~~~~~~~l~~~~~~~L~~-~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~ 393 (448)
++++..+...++.+++.+.+.+ +|++++. +|+.+ ...++....+ +....++.+.|+++..+.+
T Consensus 285 WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~--~p~gT-YL~WLD~r~l-------------~l~d~~l~~~ll~~akVal 348 (388)
T COG1168 285 WLDELLEYLKDNRDYVADFLNKHLPGVKVT--EPQGT-YLAWLDCREL-------------GLDDSELAEFLLEEAKVAL 348 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCcEEe--cCCCc-eeeeeecccc-------------CCChHHHHHHHHHhhcEec
Confidence 8999999999999999999997 5899985 44433 3333332211 1112478888999888988
Q ss_pred EeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy14299 394 GYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELR 432 (448)
Q Consensus 394 ~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~ 432 (448)
..+...|.++.+++|+.+.| +++-++..++.|+..
T Consensus 349 ~~G~~FG~~g~gf~RlN~ac----pr~~L~eal~ri~~a 383 (388)
T COG1168 349 SPGSTFGEEGSGFVRLNFAC----PRAILEEALERLKRA 383 (388)
T ss_pred cCCCccCcCCCceEEEecCC----CHHHHHHHHHHHHHH
Confidence 88888887777999999986 555444444444433
No 192
>PRK08068 transaminase; Reviewed
Probab=99.65 E-value=5.2e-14 Score=143.88 Aligned_cols=151 Identities=10% Similarity=0.012 Sum_probs=108.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|+++++..++.+... +++.|+++..++..+...++..|+ +++.+|.++ +..+|++
T Consensus 96 ~i~it~G~~~~l~~~~~~~~~--------------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~ 158 (389)
T PRK08068 96 EVAILFGGKAGLVELPQCLMN--------------PGDTILVPDPGYPDYLSGVALARA---QFETMPLIAENNFLPDYT 158 (389)
T ss_pred cEEEcCCcHHHHHHHHHHhCC--------------CCCEEEEcCCCCcchHHHHHhcCC---EEEEeecccccCCCCCHH
Confidence 367899999997776554433 567799999999999999999998 788999875 3578999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCH---HHHHHHHHHcCCEEEEecccccccccccchhhhhc--CCCCcc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPL---DEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK--GINRAN 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l---~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~--~~~~aD 156 (448)
++++.+.+ ++++|+++.++|+||.+.+. ++|.++|++||+++++|.+|+-............. +.....
T Consensus 159 ~l~~~~~~------~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~ 232 (389)
T PRK08068 159 KIPEEVAE------KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVG 232 (389)
T ss_pred HHHHhccc------cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCE
Confidence 99988853 47899999999999998775 67788999999999999998643221100000011 111123
Q ss_pred EEEECCccccCCCC-ceEEEEE
Q psy14299 157 SVSWNPHKMLGAPL-QCSILLI 177 (448)
Q Consensus 157 ~~~~s~hK~l~~P~-g~G~l~v 177 (448)
+++.|+.|.++.|. -+|+++.
T Consensus 233 i~~~S~SK~~g~~GlRiG~~~~ 254 (389)
T PRK08068 233 IELYTLSKTFNMAGWRVAFAVG 254 (389)
T ss_pred EEEecchhccCCccceeEeEec
Confidence 66678999886542 3566654
No 193
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.65 E-value=5.2e-14 Score=140.71 Aligned_cols=154 Identities=12% Similarity=0.115 Sum_probs=123.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-CCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-GQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-g~id~e~ 82 (448)
.++.+++||.|+.+++.++- + .|++.|+++..+..+...+..+.|. +.+.+.+|++ +.||++.
T Consensus 51 ~ava~~sgT~AL~laL~al~--i-----------g~GDeVI~ps~TfvATan~i~~~Ga---~PVFvDid~~T~nid~~~ 114 (374)
T COG0399 51 YAVAVSSGTAALHLALLALA--I-----------GPGDEVIVPSFTFVATANAVLLVGA---KPVFVDIDPDTLNIDPDL 114 (374)
T ss_pred eEEEecChHHHHHHHHHhcC--C-----------CCCCEEEecCCchHHHHHHHHHcCC---eEEEEecCCcccCCCHHH
Confidence 46889999999999987533 2 3788999999999999999999999 7889999865 8999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
||++|.+ ++++|+.+| ..|...|+++|.++|++||++++-|+||+.|...-...- -.++.+-+++|-+
T Consensus 115 ie~aIt~------~tKAIipVh---l~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~v---Gt~Gd~~~fSF~~ 182 (374)
T COG0399 115 IEAAITP------RTKAIIPVH---LAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKV---GSFGDIGAFSFHA 182 (374)
T ss_pred HHHHccc------CCeEEEEeh---hccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCccc---ccccceEEEEecC
Confidence 9999976 488999887 368888999999999999999999999999887544321 2233345666777
Q ss_pred ccccCCCCceEEEEEeccchhhhh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQA 186 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~ 186 (448)
+|.+.+- ..|++..+++++....
T Consensus 183 ~K~ittg-EGGav~tnd~ela~k~ 205 (374)
T COG0399 183 TKNLTTG-EGGAVVTNDEELAEKA 205 (374)
T ss_pred CCCcccc-CceEEEeCCHHHHHHH
Confidence 7988765 5677777776655443
No 194
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.65 E-value=1.7e-14 Score=147.50 Aligned_cols=145 Identities=12% Similarity=0.042 Sum_probs=112.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHH----HHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLK----AAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~----~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
.+++++|||+|+.+++.+..+ +++.|+++...|.+... .+...|+ ++..++.. +
T Consensus 82 ~~l~~~sgt~Ai~~~l~al~~--------------~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi---~v~~vd~~-----~ 139 (394)
T PRK07050 82 HALLQPSGLAAISLVYFGLVK--------------AGDDVLIPDNAYGPNRDHGEWLARDFGI---TVRFYDPL-----I 139 (394)
T ss_pred eEEEeccHHHHHHHHHHHHhC--------------CCCEEEEecCCcccHHHHHHHHHHhcCe---EEEEECCC-----C
Confidence 478999999999988877643 67789999999987664 3455566 67766543 4
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
.+++++++++ ++++|++++++|++|...|+++|+++|+++|+++++|++|+.+...-+ . . . ++|+++
T Consensus 140 ~~~l~~~i~~------~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~~~-l---~--~-GaDi~v 206 (394)
T PRK07050 140 GAGIADLIQP------NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAFKP-F---E--H-GVDISV 206 (394)
T ss_pred HHHHHHhcCC------CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccccCH-H---H--c-CCeEEE
Confidence 5778887754 589999999999999999999999999999999999999988765221 1 1 1 479999
Q ss_pred ECCccccCCCCc--eEEEEEeccchh
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKEKGLL 183 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~~~~~ 183 (448)
.|.+|++++..+ .|.++++++++.
T Consensus 207 ~S~tK~~~g~~~~~gG~v~~~~~~~~ 232 (394)
T PRK07050 207 QALTKYQSGGSDVLMGATITADAELH 232 (394)
T ss_pred EECCceecCCCCeeEEEEEECCHHHH
Confidence 999999987765 455666565443
No 195
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.65 E-value=4.4e-14 Score=144.76 Aligned_cols=143 Identities=11% Similarity=0.026 Sum_probs=106.7
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCcCH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~id~ 80 (448)
.+.+++|+.++..++.+... +++.|+++...|.+..... ...|+ +++.++ .+|+
T Consensus 83 ~~~~~sG~~Ai~~~l~~~l~--------------~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~---~v~~vd-----~~d~ 140 (398)
T PRK07504 83 ARATASGMAAVTAAILCQVK--------------AGDHVVAARALFGSCRYVVETLLPRYGI---ESTLVD-----GLDL 140 (398)
T ss_pred eeEecCHHHHHHHHHHHHhC--------------CCCEEEEcCCchhHHHHHHHHHHhhcCe---EEEEEC-----CCCH
Confidence 45688999998777655433 5677888888777654433 33455 566664 3699
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
+++++++++ ++++|++++++|++|.+.|+++|.++|+++|++++||++|+.+....+. .. ++|+++.
T Consensus 141 e~l~~ai~~------~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~------~~-gaDivv~ 207 (398)
T PRK07504 141 DNWEKAVRP------NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQKPL------EL-GAHIVVY 207 (398)
T ss_pred HHHHHhcCc------CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCCch------hh-CCCEEEe
Confidence 999998854 5889999999999999999999999999999999999999866542111 11 4799999
Q ss_pred CCccccCCCC-ceEEEEEeccch
Q psy14299 161 NPHKMLGAPL-QCSILLIKEKGL 182 (448)
Q Consensus 161 s~hK~l~~P~-g~G~l~vr~~~~ 182 (448)
|+||++++|. ..|.+++.+++.
T Consensus 208 S~sK~l~g~g~~~GG~vv~~~~~ 230 (398)
T PRK07504 208 SATKHIDGQGRCLGGVVLSDKAW 230 (398)
T ss_pred eccccccCCccceEEEEEeCcHH
Confidence 9999998875 344444545443
No 196
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.65 E-value=1.3e-13 Score=143.16 Aligned_cols=159 Identities=16% Similarity=0.199 Sum_probs=115.1
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH-HhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH-WLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~-~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
.++|+|+|.++.+.+.+.+. |++.|+++...+..+..... ..|+ +++.++.++ ++.+|++
T Consensus 123 Ivit~G~t~al~~l~~~l~~--------------pGD~Vlv~~P~Y~~f~~~~~~~~g~---~vv~v~~~~~~~f~~~~~ 185 (447)
T PLN02607 123 IVLTAGATAANELLTFILAD--------------PGDALLVPTPYYPGFDRDLRWRTGV---KIVPIHCDSSNNFQVTPQ 185 (447)
T ss_pred eEEcCChHHHHHHHHHHhCC--------------CCCEEEEcCCCCcchHHHHHhcCCc---EEEEEeCCCCCCCcCCHH
Confidence 67899999997776655443 67789999888888877666 3566 688888764 3468999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccch---hhhhcCC---
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKY---SFVLKGI--- 152 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~---~~~~~~~--- 152 (448)
++++++++..+++.++++++++.++|++|...+ +++|.++|++||+++++|.+|+...+..+.. ......+
T Consensus 186 ~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~ 265 (447)
T PLN02607 186 ALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYK 265 (447)
T ss_pred HHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCC
Confidence 999999876666778999999999999998876 7888899999999999999998654421111 1001111
Q ss_pred ---CCccEEEECCccccCCC-CceEEEEEeccc
Q psy14299 153 ---NRANSVSWNPHKMLGAP-LQCSILLIKEKG 181 (448)
Q Consensus 153 ---~~aD~~~~s~hK~l~~P-~g~G~l~vr~~~ 181 (448)
+.+ .++.+..|.++.| .-+|+++..++.
T Consensus 266 ~~~~~v-~vi~s~SK~fg~~GlRvG~ivs~n~~ 297 (447)
T PLN02607 266 GVAERV-HIVYSLSKDLGLPGFRVGTIYSYNDK 297 (447)
T ss_pred CCcCcE-EEEEcchhcCCCCcceEEEEEEcCHH
Confidence 011 4456889988755 446777664443
No 197
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.65 E-value=4e-14 Score=143.83 Aligned_cols=155 Identities=17% Similarity=0.101 Sum_probs=112.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++...+.+..+ +++.|++....+......++..|. +++.++.++++.+|++++
T Consensus 90 ~i~~t~G~~~~l~~~~~~~~~--------------~gd~vli~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~l 152 (371)
T PRK05166 90 RIILGNGSEDLIAVICRAVLR--------------PGDRVVTLYPSFPLHEDYPTMMGA---RVERVTVTPDLGFDLDAL 152 (371)
T ss_pred HEEEcCCHHHHHHHHHHHhcC--------------CCCEEEEcCCChHHHHHHHHHcCC---eEEEeecCCCCCCCHHHH
Confidence 468999999997666655433 567788898999888888898888 789999988889999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHH--cCCEEEEecccccccccccchhh---hhcCCCCccEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEK--YDLWMHVDACWGGSLIFSEKYSF---VLKGINRANSV 158 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~--~g~~l~VD~A~~~~~~~~~~~~~---~~~~~~~aD~~ 158 (448)
++.+++ ++++|++++++|+||.+.|.+++.++++. +++++++|++|.-... ...... .......--++
T Consensus 153 ~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~~vi~ 225 (371)
T PRK05166 153 CAAVAR------APRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAA-GDDYPSALTLLKARGLPWIV 225 (371)
T ss_pred HHhhhc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcC-CcCcccHHHHHhhcCCCEEE
Confidence 998864 46789999999999999998777777664 4889999999875442 111011 11111111256
Q ss_pred EECCccccCCC-CceEEEEEeccch
Q psy14299 159 SWNPHKMLGAP-LQCSILLIKEKGL 182 (448)
Q Consensus 159 ~~s~hK~l~~P-~g~G~l~vr~~~~ 182 (448)
+.|+.|.++.| .-+|++++.++.+
T Consensus 226 i~SfSK~~~l~GlRiG~~i~~~~~l 250 (371)
T PRK05166 226 LRTFSKAYGLAGLRVGYGLVSDPEL 250 (371)
T ss_pred EeechHhhhcchhheeeeecCCHHH
Confidence 77899988744 3467766655443
No 198
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.65 E-value=7.7e-14 Score=142.27 Aligned_cols=147 Identities=10% Similarity=-0.016 Sum_probs=111.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.++++++|+.|+..++..... +++.|+++...|.+....++.......++..+. +|++++
T Consensus 70 ~~l~~~sG~~Ai~~~l~~ll~--------------~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~------~d~~~l 129 (385)
T PRK08574 70 DALAFNSGMAAISTLFFSLLK--------------AGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY------PSTEDI 129 (385)
T ss_pred cEEEeCCHHHHHHHHHHHHhC--------------CCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC------CCHHHH
Confidence 468899999998888776543 677899999999998877754321111444442 368889
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++++++ .++++|++..++|++|.+.|+++|+++||++|+++++|++|+.+....+. . .++|+++.|++
T Consensus 130 ~~~i~~-----~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l----~---~GaDivv~S~s 197 (385)
T PRK08574 130 IEAIKE-----GRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPL----R---HGADFVVHSLT 197 (385)
T ss_pred HHhcCc-----cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChh----h---hCCcEEEeeCc
Confidence 888854 15789999999999999999999999999999999999999876542211 1 14799999999
Q ss_pred cccCCCCc--eEEEEEeccch
Q psy14299 164 KMLGAPLQ--CSILLIKEKGL 182 (448)
Q Consensus 164 K~l~~P~g--~G~l~vr~~~~ 182 (448)
|++++|.. .|+++++++++
T Consensus 198 K~l~g~~d~~gG~vi~~~~~~ 218 (385)
T PRK08574 198 KYIAGHNDVVGGVAVAWSGEF 218 (385)
T ss_pred eeecCCCCceeEEEEECcHHH
Confidence 99999875 35466655544
No 199
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.65 E-value=5.2e-14 Score=140.72 Aligned_cols=142 Identities=12% Similarity=0.028 Sum_probs=101.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++..+. .+.. ++ .|++....|.++...++..|+ +++.++ |++.+
T Consensus 66 ~i~~t~G~~~~i~~~~-~~l~--------------~g-~vl~~~p~y~~~~~~~~~~g~---~~~~~~-------d~~~l 119 (330)
T TIGR01140 66 SVLPVNGAQEAIYLLP-RLLA--------------PG-RVLVLAPTYSEYARAWRAAGH---EVVELP-------DLDRL 119 (330)
T ss_pred hEEECCCHHHHHHHHH-HHhC--------------CC-eEEEeCCCcHHHHHHHHHcCC---EEEEeC-------CHHHH
Confidence 4678888888866543 3232 34 367777889899999988888 677776 88999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
++.+++ +++|++++++|++|.+.| +++|+++|++||+++++|++|...... .......+ ...-++++.
T Consensus 120 ~~~~~~-------~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~~-~~~~~i~~~ 190 (330)
T TIGR01140 120 PAALEE-------LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD-ASLAPQAA-RFPGLVVLR 190 (330)
T ss_pred Hhhccc-------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc-cchhhHhc-cCCCEEEEE
Confidence 888732 568889999999999988 677788899999999999998754431 11111111 112458888
Q ss_pred CCccccCCC-CceEEEEEecc
Q psy14299 161 NPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 161 s~hK~l~~P-~g~G~l~vr~~ 180 (448)
+++|+++.| ..+|+++++++
T Consensus 191 S~SK~~g~~G~R~G~i~~~~~ 211 (330)
T TIGR01140 191 SLTKFFGLAGLRLGFVVAHPA 211 (330)
T ss_pred ecchhhcCchhhhhheeCCHH
Confidence 999999855 44688777543
No 200
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.65 E-value=8.9e-14 Score=143.66 Aligned_cols=140 Identities=14% Similarity=0.110 Sum_probs=110.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHH----HHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLK----AAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~----~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
.++++++|+.|+..++.+... +++.|+++...|..... .+...|+ .++.++.+ |
T Consensus 80 ~al~~~SG~~Ai~~al~all~--------------pGd~VIv~~~~y~~t~~~~~~~~~~~G~---~v~~vd~~-----d 137 (427)
T PRK05994 80 AALAVASGHAAQFLVFHTLLQ--------------PGDEFIAARKLYGGSINQFGHAFKSFGW---QVRWADAD-----D 137 (427)
T ss_pred cEEEEcCHHHHHHHHHHHHhC--------------CCCEEEEecCcchhHHHHHHHHHHhcCc---EEEEECCC-----C
Confidence 478999999999988876543 56778888888876443 3455666 67777654 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++++++|++|.+.|+++|.++||++|+++++|++++.+....+ . . .++|+++
T Consensus 138 ~~~l~~ai~~------~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~~p-l-----~-~gaDivv 204 (427)
T PRK05994 138 PASFERAITP------RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLIRP-I-----E-HGADIVV 204 (427)
T ss_pred HHHHHHhcCc------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccCCc-c-----c-cCCcEEE
Confidence 8999998854 588999999999999999999999999999999999999986654211 1 1 1589999
Q ss_pred ECCccccCCCCc-eEEEEEe
Q psy14299 160 WNPHKMLGAPLQ-CSILLIK 178 (448)
Q Consensus 160 ~s~hK~l~~P~g-~G~l~vr 178 (448)
.|+||++++|.+ .|.+++.
T Consensus 205 ~S~tK~lgg~~~~~gG~v~~ 224 (427)
T PRK05994 205 HSLTKFLGGHGNSMGGIIVD 224 (427)
T ss_pred EcCccccCCCCCcEEEEEEe
Confidence 999999998875 5555553
No 201
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.64 E-value=1.4e-13 Score=141.61 Aligned_cols=151 Identities=11% Similarity=0.041 Sum_probs=110.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC--CCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN--ERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~--~~g~id~e 81 (448)
..++|+|+++++.+++.+... +++.|+++...+..+...++..|. +++.++.+ .++.+|++
T Consensus 99 ~I~it~G~~~al~~~~~~l~~--------------~gd~v~v~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~ 161 (409)
T PLN00143 99 DVYLTLGCKHAAEIIIKVLAR--------------PEANILLPRPGFPDVETYAIFHHL---EIRHFDLLPEKGWEVDLD 161 (409)
T ss_pred hEEEecChHHHHHHHHHHHcC--------------CCCEEEEcCCCCcCHHHHHHHcCC---EEEEEeccCCCCCcCCHH
Confidence 367899999998888776544 567788899999999999998888 78888874 34579999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCc--c
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRA--N 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~a--D 156 (448)
+|++++++ +++.++++.++|+||.+.+ +++|.++|++|++++++|.+|............ ...+... =
T Consensus 162 ~l~~~~~~------~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~-~~~~~~~~~v 234 (409)
T PLN00143 162 AVEAIADE------NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVP-MGLFASIVPV 234 (409)
T ss_pred HHHHhccc------CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcc-hhhhcccCcE
Confidence 99988754 4778889999999999877 777888999999999999998854431111000 0001111 1
Q ss_pred EEEECCccccCCC-CceEEEEEe
Q psy14299 157 SVSWNPHKMLGAP-LQCSILLIK 178 (448)
Q Consensus 157 ~~~~s~hK~l~~P-~g~G~l~vr 178 (448)
+++.|+.|.++.| .-+|+++..
T Consensus 235 i~~~SfSK~f~~pGlRvG~~v~~ 257 (409)
T PLN00143 235 ITLGSISKRWMIPGWGLGWLVTC 257 (409)
T ss_pred EEEccchhhcCCCccceEEEEee
Confidence 5667889986655 447777664
No 202
>PLN02242 methionine gamma-lyase
Probab=99.64 E-value=7.7e-14 Score=143.62 Aligned_cols=145 Identities=8% Similarity=-0.010 Sum_probs=108.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH-----HhCCCCCcEEEEecCCCCCc
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH-----WLGIGMDNVIRVKTNERGQM 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~-----~~g~~~~~v~~v~~~~~g~i 78 (448)
.+++++||++++..++.+..+ +++.|+++...+......+. ..|+ +++.++.+
T Consensus 93 ~~l~~~sG~~Ai~~al~al~~--------------~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~---~~~~~d~~----- 150 (418)
T PLN02242 93 AAYCTASGMSAISSVLLQLCS--------------SGGHVVASNTLYGGTHALLAHFLPRKCNI---TTTFVDIT----- 150 (418)
T ss_pred eEEEEccHHHHHHHHHHHHhC--------------CCCEEEEcCCcHHHHHHHHHHhhhhccCc---eEEEcCCC-----
Confidence 457899999999998877654 56778888877666655442 3444 45555543
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
|++++++++++ .++++|++++++|++|.+.|+++|+++||+||++++||.+|+.... +.. .+ ++|++
T Consensus 151 d~e~l~~~i~~-----~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~--~~~-----~~-g~div 217 (418)
T PLN02242 151 DLEAVKKAVVP-----GKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVL--SPA-----RL-GADVV 217 (418)
T ss_pred CHHHHHHhcCc-----CCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCC--CHH-----Hc-CCcEE
Confidence 89999998854 1488999999999999999999999999999999999999964432 111 11 37999
Q ss_pred EECCccccCCCCce--EEEEEeccchhh
Q psy14299 159 SWNPHKMLGAPLQC--SILLIKEKGLLH 184 (448)
Q Consensus 159 ~~s~hK~l~~P~g~--G~l~vr~~~~~~ 184 (448)
+.|++|+++++... |+++. ++++..
T Consensus 218 v~S~SK~l~g~g~~~gG~iv~-~~~li~ 244 (418)
T PLN02242 218 VHSISKFISGGADIIAGAVCG-PAELVN 244 (418)
T ss_pred EEeCccccCCCCCceEEEEEc-CHHHHH
Confidence 99999999988653 55554 444433
No 203
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.64 E-value=3.1e-14 Score=143.10 Aligned_cols=147 Identities=17% Similarity=0.146 Sum_probs=100.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEe---cCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFT---SEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~---~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~ 80 (448)
..++++||+++|..++.+... +++.|++ +...|.++..++++.|. ++.. .+ |+
T Consensus 73 ~ilv~~gg~~a~~~~~~al~~--------------~gd~Vli~~~d~p~~~s~~~~~~l~ga---~~~~--~~-----~l 128 (346)
T TIGR03576 73 KILVFNRTSSAILATILALEP--------------PGRKVVHYLPEKPAHPSIPRSCKLAGA---EYFE--SD-----EL 128 (346)
T ss_pred eEEEECCHHHHHHHHHHHhCC--------------CCCEEEECCCCCCCchhHHHHHHHcCC---EEec--cC-----CH
Confidence 578999999999988877654 4556664 25799999999999887 4422 21 44
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
++++. . .++++|+++. ++++|.+ .||++|+++|++||++++||.||+.+........... .. .+|+
T Consensus 129 ~~l~~-~-------~~~~lIiitg-~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~-~~-~~di 197 (346)
T TIGR03576 129 SELKK-I-------DGTSLVVITG-STMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPAL-DL-GADL 197 (346)
T ss_pred HHHhh-C-------cCceEEEEEC-CCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHH-Hc-CCcE
Confidence 54321 1 2366777754 6889988 7899999999999999999999998754211111111 11 3689
Q ss_pred EEECCccccCCCCceEEEEEeccchhhhhc
Q psy14299 158 VSWNPHKMLGAPLQCSILLIKEKGLLHQAN 187 (448)
Q Consensus 158 ~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~ 187 (448)
++.+++|++.++. .|+++. ++++.....
T Consensus 198 vv~s~SKalaG~r-~G~v~~-~~~li~~l~ 225 (346)
T TIGR03576 198 VVTSTDKLMDGPR-GGLLAG-RKELVDKIK 225 (346)
T ss_pred EEeccchhccccc-eEEEEe-CHHHHHHHH
Confidence 9999999886665 466655 444444443
No 204
>PRK07337 aminotransferase; Validated
Probab=99.64 E-value=7.4e-14 Score=142.65 Aligned_cols=150 Identities=11% Similarity=-0.017 Sum_probs=110.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|+++++.+++.+..+ +++.|+++..+|.++...++..|. +++.+|.++ ++.+|++
T Consensus 92 ~i~~t~G~~~al~~~~~~l~~--------------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~ 154 (388)
T PRK07337 92 RIVVTAGASAALLLACLALVE--------------RGDEVLMPDPSYPCNRHFVAAAEG---RPVLVPSGPAERFQLTAA 154 (388)
T ss_pred hEEEecCcHHHHHHHHHHhcC--------------CCCEEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCcCCHH
Confidence 367999999998777665433 567899999999999988888887 788888864 4589999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
++++.+.+ ++++|++++++|+||...+ +++|+++|+++|+++++|.++........ ......+ ..+++
T Consensus 155 ~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~-~~~vi 225 (388)
T PRK07337 155 DVEAAWGE------RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA--PVSALSL-GDDVI 225 (388)
T ss_pred HHHhhcCc------cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC--CcChhhc-cCCEE
Confidence 99998854 4788999999999998765 78889999999999999999875332111 0011111 12444
Q ss_pred -EECCccccCCCC-ceEEEEEec
Q psy14299 159 -SWNPHKMLGAPL-QCSILLIKE 179 (448)
Q Consensus 159 -~~s~hK~l~~P~-g~G~l~vr~ 179 (448)
+.|++|.++.|. -+|+++..+
T Consensus 226 ~~~S~SK~~~~~G~RiG~~~~~~ 248 (388)
T PRK07337 226 TINSFSKYFNMTGWRLGWLVVPE 248 (388)
T ss_pred EEEechhhcCCchhheeeeecCH
Confidence 458899887553 277776643
No 205
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.64 E-value=1.6e-13 Score=141.05 Aligned_cols=156 Identities=11% Similarity=0.051 Sum_probs=109.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC--CCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN--ERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~--~~g~id~e 81 (448)
..++|+|+++++.+++.+... +++.|++++..+..+...++..|. +++.+|.+ +++.+|++
T Consensus 97 ~I~it~G~~~al~~~~~~l~~--------------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~ 159 (403)
T PRK08636 97 EVVATMGSKEGYVHLVQAITN--------------PGDVAIVPDPAYPIHSQAFILAGG---NVHKMPLEYNEDFELDED 159 (403)
T ss_pred eEEECCChHHHHHHHHHHhCC--------------CCCEEEEcCCCCcchHHHHHhcCC---EEEEEeccccccCccChh
Confidence 378999999998887766544 567899999999999999999898 78888874 34689988
Q ss_pred HHHHHHHHhhhc-CCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCC-cc
Q psy14299 82 FLEQTIQTSLAE-KKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINR-AN 156 (448)
Q Consensus 82 ~Le~~l~~~~~~-~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~-aD 156 (448)
.+...+++..+. ..++++++++.++|+||.+.+ +++|.++|++|++++++|.+|+-........ ..+..+.. .|
T Consensus 160 ~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~-~~~~~~~~~~~ 238 (403)
T PRK08636 160 QFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKT-PSILEVEGAKD 238 (403)
T ss_pred hhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCC-CChhcCCCccc
Confidence 765555432222 246889999999999998866 5778889999999999999988544311000 11111111 12
Q ss_pred --EEEECCccccCCC-CceEEEEE
Q psy14299 157 --SVSWNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 157 --~~~~s~hK~l~~P-~g~G~l~v 177 (448)
+.+.|+.|.++.| .-+|+++.
T Consensus 239 ~~i~~~S~SK~~~~~GlRiG~iv~ 262 (403)
T PRK08636 239 VAVESYTLSKSYNMAGWRVGFVVG 262 (403)
T ss_pred cEEEEEecccccCCccceeeeeeC
Confidence 3456899998654 44566544
No 206
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=1.4e-13 Score=139.73 Aligned_cols=149 Identities=11% Similarity=-0.008 Sum_probs=105.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++..++.+..+ +++.|+++...|+.+...++..|. ++..+|.+.+ .+|++++
T Consensus 86 ~I~it~G~~~~l~~~~~~~~~--------------~gd~vlv~~p~y~~~~~~~~~~g~---~~~~vp~~~~-~~~~~~l 147 (369)
T PRK08153 86 NIMVGEGIDGLLGLIVRLYVE--------------PGDPVVTSLGAYPTFNYHVAGFGG---RLVTVPYRDD-REDLDAL 147 (369)
T ss_pred HEEEcCCHHHHHHHHHHHhcC--------------CCCEEEECCCcchHHHHHHHHcCC---eEEEeeCCCC-CCCHHHH
Confidence 467888888887666655443 667899999999999888888887 7888998655 4788888
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc--CCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY--DLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~--g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
++.+.+ .++++++++.++|+||.+.+.+++.++++.+ ++++++|.+|+..... .... .+.....--++..+
T Consensus 148 ~~~~~~-----~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~-~~~~-~~~~~~~~~i~~~S 220 (369)
T PRK08153 148 LDAARR-----ENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPA-GAAP-PIDTDDPNVIRMRT 220 (369)
T ss_pred HHHhcc-----cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCc-ccch-hhhhcCCCEEEEec
Confidence 877653 2477888899999999999988888777654 8999999998743321 1000 11111111256678
Q ss_pred CccccCCCC-ceEEEEE
Q psy14299 162 PHKMLGAPL-QCSILLI 177 (448)
Q Consensus 162 ~hK~l~~P~-g~G~l~v 177 (448)
+.|.++.|. -+|+++.
T Consensus 221 fSK~~g~~GlRiG~~v~ 237 (369)
T PRK08153 221 FSKAYGLAGARVGYAIG 237 (369)
T ss_pred chHhccCcchheeeeec
Confidence 899987553 3466655
No 207
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.64 E-value=1.1e-13 Score=141.71 Aligned_cols=145 Identities=14% Similarity=0.072 Sum_probs=108.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH----HHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA----AHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~----~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++|+.++..++.+... +++.|+++...|.+.... +...|+ ++..++. .|
T Consensus 81 ~~i~~ssG~~Ai~~~l~all~--------------~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi---~v~~vd~-----~d 138 (398)
T PRK08249 81 AATAFSTGMAAISNTLYTFLK--------------PGDRVVSIKDTYGGTNKIFTEFLPRMGV---DVTLCET-----GD 138 (398)
T ss_pred eEEEeCChHHHHHHHHHHhcC--------------CCCEEEEcCCchHHHHHHHHHHHhhCCe---EEEEcCC-----CC
Confidence 468889999888877765433 567899999999875543 334455 5555543 58
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|.+..++|++|.+.|+++|.++||+||++++||++++......+ . . ..+|+++
T Consensus 139 ~e~l~~~i~~------~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~-----l-~-~~~Divv 205 (398)
T PRK08249 139 HEQIEAEIAK------GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQNP-----L-A-LGADLVI 205 (398)
T ss_pred HHHHHHhcCC------CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCCc-----h-h-hCCCEEe
Confidence 9999999854 478999999999999999999999999999999999999986543211 1 1 1479999
Q ss_pred ECCccccCCCCc-eEEEEEeccchh
Q psy14299 160 WNPHKMLGAPLQ-CSILLIKEKGLL 183 (448)
Q Consensus 160 ~s~hK~l~~P~g-~G~l~vr~~~~~ 183 (448)
.|++|+++++.. .|.+++.++++.
T Consensus 206 ~S~sK~l~g~~~~~gG~vv~~~~l~ 230 (398)
T PRK08249 206 HSATKFLSGHADALGGVVCGSKELM 230 (398)
T ss_pred ccCceecCCCCCceEEEEECCHHHH
Confidence 999999998763 334445454443
No 208
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.63 E-value=1.1e-13 Score=142.14 Aligned_cols=151 Identities=11% Similarity=-0.062 Sum_probs=103.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|+++++..++.+... +++.|++++..+..........+. .++.++.+. ++.+|++
T Consensus 95 ~i~~t~G~~~al~~~~~~~~~--------------~gd~vl~~~p~y~~y~~~~~~~~~---~~~~v~~~~~~~~~~~~~ 157 (402)
T PRK06107 95 EITVGGGAKQAIFLALMATLE--------------AGDEVIIPAPYWVSYPDMVLANDG---TPVIVACPEEQGFKLTPE 157 (402)
T ss_pred hEEEeCCHHHHHHHHHHHhcC--------------CCCEEEEecCCCcCHHHHHHHcCC---EEEEecCCcccCCCCCHH
Confidence 378999999998887765432 567788888877777776666665 566777653 3578999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHc-CCEEEEecccccccccc---cchhhhhcCCCC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKY-DLWMHVDACWGGSLIFS---EKYSFVLKGINR 154 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~-g~~l~VD~A~~~~~~~~---~~~~~~~~~~~~ 154 (448)
++++.+.+ ++++|++++++|+||...+ +++|+++|++| |+++++|.+|+-..+.. +.......+...
T Consensus 158 ~l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~ 231 (402)
T PRK06107 158 ALEAAITP------RTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRD 231 (402)
T ss_pred HHHhhcCc------CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccC
Confidence 99998853 4788999999999998765 67778889998 99999999987432211 111111111111
Q ss_pred ccEEEECCccccCCCCc-eEEEEE
Q psy14299 155 ANSVSWNPHKMLGAPLQ-CSILLI 177 (448)
Q Consensus 155 aD~~~~s~hK~l~~P~g-~G~l~v 177 (448)
--++..|++|.++.|.- +|+++.
T Consensus 232 ~vi~~~S~SK~~~~pGlRiG~~~~ 255 (402)
T PRK06107 232 RVLVTNGVSKTYAMTGWRIGYAAG 255 (402)
T ss_pred CEEEEeccchhhcCcccceeeeec
Confidence 22555677999865532 576655
No 209
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.63 E-value=3.2e-15 Score=146.13 Aligned_cols=158 Identities=19% Similarity=0.279 Sum_probs=114.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH---HhCCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH---WLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~---~~g~~~~~v~~v~~~~~g~id~ 80 (448)
.++|+++||++|.+++.+... |+..|++...+|..+.+... +.|. +++.++.+++|.+|+
T Consensus 46 ~a~f~~sGT~An~~al~~~~~--------------~~~~vi~~~~aHi~~~E~ga~~~~~G~---~~~~l~~~~~G~l~~ 108 (290)
T PF01212_consen 46 AALFVPSGTMANQLALRAHLR--------------PGESVICADTAHIHFDETGAIEELSGA---KLIPLPSDDDGKLTP 108 (290)
T ss_dssp EEEEESSHHHHHHHHHHHHHH--------------TTEEEEEETTEHHHHSSTTHHHHHTTC---EEEEEBECTGTBB-H
T ss_pred EEEEeCCCChHHHHHHHHHHh--------------cCCceeccccceeeeeccchhhHhcCc---EEEECCCcccCCCCH
Confidence 357999999999999998885 56789999999998775443 4566 799999876699999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCcc-ccc---cCHHHHHHHHHHcCCEEEEeccccccccccc--chhhhhcCCCC
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVL-GAF---DPLDEIATVCEKYDLWMHVDACWGGSLIFSE--KYSFVLKGINR 154 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~t-G~~---~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~--~~~~~~~~~~~ 154 (448)
++|++.++.......+|++|.++.+++.. |.+ +.|++|+++||+||+++|+|||.-+...... ...... ..
T Consensus 109 ~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~---~~ 185 (290)
T PF01212_consen 109 EDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIA---AG 185 (290)
T ss_dssp HHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH---TT
T ss_pred HHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh---hh
Confidence 99999998754433467778888877753 654 5678889999999999999999766554211 111222 36
Q ss_pred ccEEEECCccccCCCCceEEEEEeccchh
Q psy14299 155 ANSVSWNPHKMLGAPLQCSILLIKEKGLL 183 (448)
Q Consensus 155 aD~~~~s~hK~l~~P~g~G~l~vr~~~~~ 183 (448)
+|++++++.|.+++|.|.-+ +-+++++
T Consensus 186 ~D~v~~~~tK~~g~~~Gavl--~~~~~~i 212 (290)
T PF01212_consen 186 ADSVSFGGTKNGGAPGGAVL--AGNKEFI 212 (290)
T ss_dssp SSEEEEETTSTT-SSSEEEE--EESHHHH
T ss_pred CCEEEEEEEcccccccceEE--EechHHH
Confidence 89999999999998864333 3344433
No 210
>PRK07908 hypothetical protein; Provisional
Probab=99.63 E-value=6.9e-14 Score=140.86 Aligned_cols=147 Identities=16% Similarity=0.080 Sum_probs=100.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++.+++. .. ++.+ ++...+.......++..|. +++.+|.++++.+|++.+
T Consensus 77 ~I~it~Ga~~al~~~~~--l~--------------~~~v-iv~~P~y~~~~~~~~~~G~---~i~~v~~~~~~~~d~~~l 136 (349)
T PRK07908 77 EVLLLAGAAEGFALLAR--LR--------------PRRA-AVVHPSFTEPEAALRAAGI---PVHRVVLDPPFRLDPAAV 136 (349)
T ss_pred hEEECCCHHHHHHHHHh--cC--------------CCeE-EEeCCCChHHHHHHHHcCC---EEEeeccCcccCcChhHh
Confidence 46899999999876654 12 3333 3455666667777888888 788999887788888854
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE-CC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW-NP 162 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~-s~ 162 (448)
+ + +++++++++++|+||.+.|.++|.++|+ ++.++++|++|+-... .. ...+.....-+++++ |+
T Consensus 137 ~----~------~~~~i~l~np~NPTG~~~~~~~l~~l~~-~~~~iIvDe~y~~~~~-~~--~~~l~~~~~~~~i~i~S~ 202 (349)
T PRK07908 137 P----D------DADLVVIGNPTNPTSVLHPAEQLLALRR-PGRILVVDEAFADAVP-GE--PESLAGDDLPGVLVLRSL 202 (349)
T ss_pred c----c------CCCEEEEcCCCCCCCCCcCHHHHHHHHh-cCCEEEEECcchhhcc-CC--ccccccccCCCEEEEeec
Confidence 2 1 4678999999999999999999999996 5889999999874321 11 111111111245555 89
Q ss_pred ccccCCC-CceEEEEEeccchhhh
Q psy14299 163 HKMLGAP-LQCSILLIKEKGLLHQ 185 (448)
Q Consensus 163 hK~l~~P-~g~G~l~vr~~~~~~~ 185 (448)
+|.++.| .-+|+++..+ +++..
T Consensus 203 SK~~~l~GlRiG~~~~~~-~~~~~ 225 (349)
T PRK07908 203 TKTWSLAGLRVGYALGAP-DVLAR 225 (349)
T ss_pred ccccCCccceeeeeecCH-HHHHH
Confidence 9987633 4478888644 44433
No 211
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.63 E-value=1.4e-14 Score=146.57 Aligned_cols=269 Identities=14% Similarity=0.162 Sum_probs=149.0
Q ss_pred eEEEecCCCchHHHHHHHHh-CCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHH
Q psy14299 41 LCMFTSEDSHYSMLKAAHWL-GIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIA 119 (448)
Q Consensus 41 ~~Vl~~~~~H~s~~~~~~~~-g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~ 119 (448)
..|+++...|+.....++-. .....+++.++.++++..| + ..+..|+++.|++ .|.+.|+++|+
T Consensus 155 ~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~------~~~a~v~vq~Pn~-~G~~ed~~~i~ 219 (429)
T PF02347_consen 155 NKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------D------DDTAAVMVQNPNT-FGVFEDIKEIA 219 (429)
T ss_dssp -EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB---------S------TTEEEEEEESS-T-TSB--THHHHH
T ss_pred cEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc--------c------cCeEEEEeecCCC-CceEeeHHHHH
Confidence 46899999999988766532 1112278889988888777 2 3577899999887 99999999999
Q ss_pred HHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCccccCCCC-----ceEEEEEeccchhhhhccCCcccc
Q psy14299 120 TVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPHKMLGAPL-----QCSILLIKEKGLLHQANATAATYL 194 (448)
Q Consensus 120 ~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~-----g~G~l~vr~~~~~~~~~~~~~~y~ 194 (448)
+++|++|+.+++ ++--........ + +--++|++ ++.||.|+.|. ++|++.++++ +.+ ..|+-+
T Consensus 220 ~~~h~~gal~~~-~ad~~aL~~l~~-P----ge~GADI~-vg~~Q~fg~p~~~GGP~~G~~a~~~~-l~r----~lPGRi 287 (429)
T PF02347_consen 220 DIAHAAGALVIV-GADPNALGGLKS-P----GEYGADIV-VGEHQTFGIPMGFGGPGAGFFAVRED-LVR----QLPGRI 287 (429)
T ss_dssp HHHHHTT-EEEE-CGGCCGCCTC---G----GGGT-SEE-EECCTTTT---CCC-S--EEEEE-GG-GGG----GS-S-E
T ss_pred HHHHHcCCEEEE-ecCHHHHhCcCC-h----hhcCccEE-eeCCCCCcccCCCCCCCeeeEEEhhh-hhh----hCCCce
Confidence 999999999988 653322221110 1 11158999 55588777664 4667888775 322 233333
Q ss_pred cccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhh
Q psy14299 195 FQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATY 274 (448)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (448)
...+....+. ..+.+... .=++++++.|+.|+||+ |++
T Consensus 288 VG~t~D~~G~---~~~~ltLq----------------------tREQHIrReKAtSNIct-------------nqa---- 325 (429)
T PF02347_consen 288 VGQTKDADGK---RAFVLTLQ----------------------TREQHIRREKATSNICT-------------NQA---- 325 (429)
T ss_dssp EEEEEBCCCS---CCEEEE-G----------------------GGTCHHHGCCSTT---S-------------S-H----
T ss_pred eccccccccc---ceeeeccc----------------------cccccccccchhhhhhh-------------hHH----
Confidence 3211100000 01111000 11356777888888887 333
Q ss_pred hhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEE
Q psy14299 275 LFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICF 354 (448)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f 354 (448)
..++..+..+.+.|.+|++++.++...+++|+.++|+++.++.+ ..+.+..+++
T Consensus 326 ------------------------L~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~--~~~~f~e~v~ 379 (429)
T PF02347_consen 326 ------------------------LLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPF--DNPFFFEFVV 379 (429)
T ss_dssp ------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECS--SSSSBSSEEE
T ss_pred ------------------------HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc--CCCCceeeee
Confidence 22677788999999999999999999999999999999844443 3334444443
Q ss_pred EeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHH
Q psy14299 355 WFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQI 429 (448)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al 429 (448)
...+. . ...++.++....| +... .... +.+-+|+ ...+|+||||+|++++
T Consensus 380 ~~~~~--~--------------~~~~l~~~~~~~g---l~~~-~~~~---~~~li~~--TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 380 VFSKD--K--------------EVEELLKRGIEGG---LNLR-YPDD---GALLICV--TETRTKEDIDRLVEAF 429 (429)
T ss_dssp EESS---H--------------HHHHHHHTT-------EEEG-GG-S---SEEEEE----TT--HHHHHHHHH--
T ss_pred ecCCc--H--------------HHHHHHHHHHhcC---CCcc-ccCC---CeEEEEc--cCCCCHHHHHHHHhcC
Confidence 32110 0 0113444444445 2221 2222 5889999 5899999999999875
No 212
>PRK07505 hypothetical protein; Provisional
Probab=99.63 E-value=2e-13 Score=140.21 Aligned_cols=159 Identities=18% Similarity=0.203 Sum_probs=103.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++.++|+++|..++..++.... +.....+|+.+...|.|+.........+ ..++.+|.+ |++++
T Consensus 107 ~~~~~~sG~~a~~~ai~~~~~~~~--------~~~~~~vi~~~~~~H~s~~~~~~~~~~~-~~v~~~~~~-----d~~~l 172 (402)
T PRK07505 107 SVLTFTSCSAAHLGILPLLASGHL--------TGGVPPHMVFDKNAHASLNILKGICADE-TEVETIDHN-----DLDAL 172 (402)
T ss_pred CEEEECChHHHHHHHHHHHHhccc--------CCCCCCEEEEchhhhHhHHhhhhhhhcC-CeEEEeCCC-----CHHHH
Confidence 567788899999888876554211 0013446777889999875432222111 157777764 89999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccc-cc-cchh-hhhcC-CCCccEEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLI-FS-EKYS-FVLKG-INRANSVS 159 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~-~~-~~~~-~~~~~-~~~aD~~~ 159 (448)
++++++ ++++++++.+.+++|.+.|+++|.++|++||+++++|++|+.+.+ .. .... ..... .....+++
T Consensus 173 ~~~~~~------~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~ 246 (402)
T PRK07505 173 EDICKT------NKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIA 246 (402)
T ss_pred HHHHhc------CCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEE
Confidence 998854 356888889999999999999999999999999999999864221 11 0001 01111 12234666
Q ss_pred ECCccccCCCCceEEEEEeccchhh
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLH 184 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~ 184 (448)
.++.|.++++ | |++.+.+++...
T Consensus 247 ~s~sK~~~~~-G-g~~~~~~~~~~~ 269 (402)
T PRK07505 247 ASLGKAFGAS-G-GVIMLGDAEQIE 269 (402)
T ss_pred Eechhhhhcc-C-eEEEeCCHHHHH
Confidence 7899998865 2 555444544433
No 213
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.63 E-value=1.3e-13 Score=140.61 Aligned_cols=144 Identities=13% Similarity=0.105 Sum_probs=107.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHH----HHHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSM----LKAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~----~~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
.++++++|++++..++.+... +++.|+++...|.+. ...+...|+ ++..++.+ |
T Consensus 71 ~~~~~~sG~~Ai~~al~al~~--------------~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~---~v~~v~~~-----d 128 (380)
T TIGR01325 71 RAVATATGMSAIQAALMTLLQ--------------AGDHVVASRSLFGSTVGFISEILPRFGI---EVSFVDPT-----D 128 (380)
T ss_pred cEEEECCHHHHHHHHHHHHhC--------------CCCEEEEecCCcchHHHHHHHHHHHhCC---EEEEECCC-----C
Confidence 468899999999888866543 456688887777553 334555677 67777764 7
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|+++.++|++|.+.|+++|.++||++|++++||++++.+....+ . .. ++|+++
T Consensus 129 ~~~l~~~i~~------~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~p-l-----~~-g~Divv 195 (380)
T TIGR01325 129 LNAWEAAVKP------NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQP-L-----KL-GADVVV 195 (380)
T ss_pred HHHHHHhcCC------CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCc-h-----hh-CCCEEE
Confidence 8999888754 578999999999999999999999999999999999999875543211 1 11 479999
Q ss_pred ECCccccCCCCc-eEEEEEeccch
Q psy14299 160 WNPHKMLGAPLQ-CSILLIKEKGL 182 (448)
Q Consensus 160 ~s~hK~l~~P~g-~G~l~vr~~~~ 182 (448)
.|++|+++++.. .|.+++.++++
T Consensus 196 ~S~sK~l~g~g~~~gG~vv~~~~~ 219 (380)
T TIGR01325 196 YSATKHIDGQGRVMGGVIAGSEEL 219 (380)
T ss_pred eeccceecCCCCeEEEEEEeCHHH
Confidence 999999998753 33334434443
No 214
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.63 E-value=7e-14 Score=143.36 Aligned_cols=141 Identities=10% Similarity=0.041 Sum_probs=109.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHH----HHHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSM----LKAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~----~~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++|+.++..++.+... +++.|+++...|... .+.++..|+ ++..++.+ |
T Consensus 87 ~al~~~sG~~Ai~~~l~all~--------------~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~---~v~~vd~~-----d 144 (403)
T PRK07810 87 ACFATASGMSAVFTALGALLG--------------AGDRLVAARSLFGSCFVVCNEILPRWGV---ETVFVDGE-----D 144 (403)
T ss_pred cEEEECChHHHHHHHHHHHhC--------------CCCEEEEccCCcchHHHHHHHHHHHcCc---EEEEECCC-----C
Confidence 578999999998887766543 667788887776433 344555677 67777653 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++++++|++|.+.|+++|+++||++|++++||++|+.+....+. .. ++|+++
T Consensus 145 ~~~l~~ai~~------~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~------~~-gaDivv 211 (403)
T PRK07810 145 LSQWEEALSV------PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRGL------PL-GADVVV 211 (403)
T ss_pred HHHHHHhcCc------CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCChh------hc-CCcEEE
Confidence 9999999865 4789999999999999999999999999999999999999866542211 11 479999
Q ss_pred ECCccccCCCCc--eEEEEEec
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKE 179 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~ 179 (448)
.|++|+++++.. .|+++.++
T Consensus 212 ~S~tK~l~g~g~~~gG~v~~~~ 233 (403)
T PRK07810 212 YSGTKHIDGQGRVLGGAILGDR 233 (403)
T ss_pred ccCCceecCCcCceeEEEEeCh
Confidence 999999987654 46555544
No 215
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.63 E-value=1.5e-13 Score=140.85 Aligned_cols=141 Identities=14% Similarity=0.094 Sum_probs=109.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHH----HHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLK----AAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~----~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..++++||+.++..++.+... +++.|+++...|.+... .++..|+ +++.++.+ |
T Consensus 81 ~~l~~~sG~~Ai~~al~~ll~--------------~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~---~v~~vd~~-----d 138 (400)
T PRK06234 81 AAVVAASGMGAISSSLWSALK--------------AGDHVVASDTLYGCTFALLNHGLTRYGV---EVTFVDTS-----N 138 (400)
T ss_pred cEEEEcCHHHHHHHHHHHHhC--------------CCCEEEEecCccchHHHHHHHHHhhCCe---EEEEECCC-----C
Confidence 468999999998877765543 56778888887766443 3455666 67777754 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc--CCEEEEecccccccccccchhhhhcCCCCccE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY--DLWMHVDACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~--g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
++++++++++ ++++|+++.++|++|.+.|+++|.++||++ |+++++|++|+.+....+ . +. ++|+
T Consensus 139 ~e~l~~~i~~------~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~-----l-~~-g~Di 205 (400)
T PRK06234 139 LEEVRNALKA------NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRP-----L-QL-GADV 205 (400)
T ss_pred HHHHHHHhcc------CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCc-----h-hh-CCcE
Confidence 9999999864 478999999999999999999999999997 999999999987654211 1 11 4799
Q ss_pred EEECCccccCCCCc--eEEEEEec
Q psy14299 158 VSWNPHKMLGAPLQ--CSILLIKE 179 (448)
Q Consensus 158 ~~~s~hK~l~~P~g--~G~l~vr~ 179 (448)
++.|++|++++|.. .|+++.++
T Consensus 206 vv~S~sK~l~g~g~~~gG~v~~~~ 229 (400)
T PRK06234 206 VVHSATKYLNGHGDVIAGFVVGKE 229 (400)
T ss_pred EEeeccccccCCCCceeEEEEecH
Confidence 99999999998764 46666544
No 216
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.63 E-value=4.7e-14 Score=143.08 Aligned_cols=142 Identities=16% Similarity=0.109 Sum_probs=104.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH----HHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML----KAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~----~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..++++||+.++..++ .+.. +++.|+++...+.+.. ..++..|+ +++.++.. |
T Consensus 69 ~~~~~~sG~~ai~~~~-~ll~--------------~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~---~v~~vd~~-----d 125 (366)
T PRK08247 69 QGFACSSGMAAIQLVM-SLFR--------------SGDELIVSSDLYGGTYRLFEEHWKKWNV---RFVYVNTA-----S 125 (366)
T ss_pred cEEEEcCHHHHHHHHH-HHhC--------------CCCEEEEecCCcCcHHHHHHHHhhccCc---eEEEECCC-----C
Confidence 3588999998876554 3322 5567777877776533 33444566 67777653 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|+++.++|++|...|+++|+++|++||+++++|.+++......+. . .++|+++
T Consensus 126 ~~~l~~~i~~------~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~-----~--~g~di~i 192 (366)
T PRK08247 126 LKAIEQAITP------NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPL-----E--EGADIVI 192 (366)
T ss_pred HHHHHHhccc------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCch-----h--cCCcEEE
Confidence 9999998864 4789999999999999999999999999999999999999755432211 1 1479999
Q ss_pred ECCccccCCCCc--eEEEEEeccc
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKEKG 181 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~~~ 181 (448)
.|.+|+++++.+ .|++..+++.
T Consensus 193 ~S~sK~~~g~~d~~~G~iv~~~~~ 216 (366)
T PRK08247 193 HSATKYLGGHNDVLAGLVVAKGQE 216 (366)
T ss_pred eecceeccCCCceeeeEEecChHH
Confidence 999999998765 4544443333
No 217
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.63 E-value=3.2e-14 Score=144.01 Aligned_cols=145 Identities=10% Similarity=-0.025 Sum_probs=102.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.++.++||++|+.+++. +.. +++.|+++...+...........-.. .+ .+ ....|++++
T Consensus 71 ~~v~~~sG~aAi~~~l~-~l~--------------~GD~VI~~~~~yg~~~~~~~~~~~~~-~~-~~----~~~~d~~~l 129 (364)
T PRK07269 71 YALATSSGMSAIVLAFS-VFP--------------VGSKVVAVRDLYGGSFRWFNQQEKEG-RF-HF----TYANTEEEL 129 (364)
T ss_pred eEEEeCCHHHHHHHHHH-HhC--------------CCCEEEEecCCcCchHHHHHHHHhcC-cE-EE----EecCCHHHH
Confidence 57889999999887773 332 56667777666544333222111100 11 11 123589999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++++++ ++++|++++++|++|.+.|+++|+++||++|++++||.+++......+ + + .++|+++.|.+
T Consensus 130 ~~~i~~------~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~~p-----l-~-~gaDivv~S~t 196 (364)
T PRK07269 130 IAAIEE------DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQRP-----I-E-LGADIVLHSAT 196 (364)
T ss_pred HHhcCc------CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCc-----h-h-hCCcEEEecCc
Confidence 999864 588999999999999999999999999999999999999875543211 1 1 15899999999
Q ss_pred cccCCCCc--eEEEEEeccch
Q psy14299 164 KMLGAPLQ--CSILLIKEKGL 182 (448)
Q Consensus 164 K~l~~P~g--~G~l~vr~~~~ 182 (448)
|+++++.. .|+++.+++++
T Consensus 197 K~l~g~~d~~gG~v~~~~~~l 217 (364)
T PRK07269 197 KYLSGHNDVLAGVVVTNDLEL 217 (364)
T ss_pred eeccCCCcccceEEEeCcHHH
Confidence 99999886 56666655543
No 218
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.63 E-value=1.7e-13 Score=139.07 Aligned_cols=150 Identities=13% Similarity=-0.039 Sum_probs=110.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++..++.+..+ +++.|++....+..+...++..|. +++.++.++++.+|++++
T Consensus 90 ~I~it~G~~~~l~~~~~~~~~--------------~gd~v~v~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~d~~~l 152 (368)
T PRK03317 90 NVWAANGSNEILQQLLQAFGG--------------PGRTALGFVPSYSMHPIIARGTHT---EWVEGPRAADFTLDVDAA 152 (368)
T ss_pred hEEECCCHHHHHHHHHHHhcC--------------CCCEEEEeCCChHHHHHHHHhcCC---eeEEcccCCCCCCCHHHH
Confidence 467889999998877776554 566788888888888888888777 677787766789999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEeccccccccccc-chhhhhcCCCCcc-EEEEC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSE-KYSFVLKGINRAN-SVSWN 161 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~-~~~~~~~~~~~aD-~~~~s 161 (448)
++++++ .++++++++.++|+||.+.+.+++.++++.+++++++|++|+....... ......... -+ +++.+
T Consensus 153 ~~~~~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~--~~~i~~~S 225 (368)
T PRK03317 153 VAAIAE-----HRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEY--PRLVVSRT 225 (368)
T ss_pred HHHHhc-----cCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhC--CCEEEEEe
Confidence 999864 2467888899999999999999999999999999999999985432110 000111111 13 45558
Q ss_pred CccccCCCC-ceEEEEE
Q psy14299 162 PHKMLGAPL-QCSILLI 177 (448)
Q Consensus 162 ~hK~l~~P~-g~G~l~v 177 (448)
+.|.++.|. -+|+++.
T Consensus 226 fSK~~g~~GlRiG~~~~ 242 (368)
T PRK03317 226 MSKAFAFAGGRLGYLAA 242 (368)
T ss_pred chhhhccchhhhhhhhC
Confidence 999987552 3466555
No 219
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.63 E-value=1.7e-13 Score=139.54 Aligned_cols=149 Identities=18% Similarity=0.165 Sum_probs=113.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-CCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-GQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-g~id~e~ 82 (448)
..++|+|||.++.+++.++.- .+++.|+++..+|.++..++...|. +++.++.+++ +.+|+++
T Consensus 48 ~~v~~~sgt~al~~~l~~~~~-------------~~Gd~Viv~~~t~~~~~~~~~~~G~---~~v~~d~d~~~~~~d~~~ 111 (375)
T PRK11706 48 KVLLTPSCTAALEMAALLLDI-------------QPGDEVIMPSYTFVSTANAFVLRGA---KIVFVDIRPDTMNIDETL 111 (375)
T ss_pred eEEEECCHHHHHHHHHHHhCC-------------CCCCEEEECCCCcHHHHHHHHHcCC---EEEEEecCCCcCCcCHHH
Confidence 478999999997776654322 2677899999999999999999998 7889998876 4899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
+++++.+ ++++|++++ ++|...|+++|.++|++||+++++|+||+.+...... . +.. ..|+-++|+
T Consensus 112 le~~i~~------~tk~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~-~--~g~--~~~~~~~Sf 177 (375)
T PRK11706 112 IEAAITP------KTRAIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGR-A--LGT--IGHIGCFSF 177 (375)
T ss_pred HHHhcCC------CCeEEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECccccccccCCe-e--eec--CcCEEEEeC
Confidence 9999854 477888765 4899999999999999999999999999988642111 0 111 247777887
Q ss_pred c--cccCCCCceEEEEEeccchh
Q psy14299 163 H--KMLGAPLQCSILLIKEKGLL 183 (448)
Q Consensus 163 h--K~l~~P~g~G~l~vr~~~~~ 183 (448)
| |.+.+ ...|++++.++++.
T Consensus 178 ~~~K~l~~-g~gG~~~~~~~~~~ 199 (375)
T PRK11706 178 HETKNYTA-GEGGALLINDPALI 199 (375)
T ss_pred CCCccccc-cCCeEEEECCHHHH
Confidence 7 98865 33455556555443
No 220
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.62 E-value=3.5e-14 Score=143.99 Aligned_cols=276 Identities=12% Similarity=0.024 Sum_probs=172.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++..++.+... +++.|+++...+..+...++..|. +++.+|.+ ++.+|+++|
T Consensus 83 ~I~vt~Gs~e~i~~~~~~l~~--------------~gd~vlv~~P~y~~~~~~~~~~g~---~v~~v~~~-~~~~d~~~l 144 (366)
T PRK01533 83 QVLCGSGLDEVIQIISRAVLK--------------AGDNIVTAGATFPQYRHHAIIEGC---EVKEVALN-NGVYDLDEI 144 (366)
T ss_pred eEEECCCHHHHHHHHHHHhcC--------------CCCEEEEcCCcHHHHHHHHHHcCC---EEEEeecC-CCCcCHHHH
Confidence 468999999998877766543 567788898999999999999998 78899985 557999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHH---HcCCEEEEecccccccccccchhhhhcCCC--CccEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCE---KYDLWMHVDACWGGSLIFSEKYSFVLKGIN--RANSV 158 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~---~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~--~aD~~ 158 (448)
++++++ +++++++++++|+||.+.+.+++.++++ +++ ++++|.+|.-.... .........+. .--++
T Consensus 145 ~~~~~~------~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~-~~~~~~~~~~~~~~~vi~ 216 (366)
T PRK01533 145 SSVVDN------DTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTA-KDFPETLPLLEKHKNILV 216 (366)
T ss_pred HHHhCc------CCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcc-ccCcchhHHhccCCCEEE
Confidence 998854 4678999999999999988776666554 444 67889998632211 00000000000 11245
Q ss_pred EECCccccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 159 SWNPHKMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 159 ~~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
+.|+.|.++.|. -+|+++. ++++..........
T Consensus 217 ~~SfSK~~~l~GlRiG~~i~-~~~~~~~l~~~~~~--------------------------------------------- 250 (366)
T PRK01533 217 LRTFSKAYGLASFRVGYAVG-HEELIEKLNVVRLP--------------------------------------------- 250 (366)
T ss_pred EeCchHHhcChHHHHhHHhC-CHHHHHHHHHhcCC---------------------------------------------
Confidence 566777665432 2344333 22222221110000
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
.|.+.+.+..+..+++ ..+.++
T Consensus 251 --------------------------------------------------------~~~~~~~q~aa~~~l~--~~~~~~ 272 (366)
T PRK01533 251 --------------------------------------------------------FNVSSLAQKAATIAFG--DDEFIE 272 (366)
T ss_pred --------------------------------------------------------CCcCHHHHHHHHHHhC--CHHHHH
Confidence 0111111111122221 122344
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
++.+...+.++++.+.++.+ |+++. ++..+.+.+.+ + . ..++.+.|.++|+ .+.+.
T Consensus 273 ~~~~~~~~~r~~~~~~l~~~-g~~~~--~~~~nf~~~~~-~---~---------------~~~~~~~l~~~GI-~Vr~~- 328 (366)
T PRK01533 273 EIVRVNTEGLRQYESFCKEN-EIPFY--QSQTNFIFLPV-E---N---------------GGEIYEACAHAGF-IIRPF- 328 (366)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCccC--CCcCcEEEEeC-C---C---------------HHHHHHHHHHCCc-EEccC-
Confidence 45555666777788888887 88764 45555444432 2 1 1368899999994 44441
Q ss_pred cCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHHhhhhhh
Q psy14299 398 LQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDLEMQAEA 444 (448)
Q Consensus 398 ~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~~~~~~~ 444 (448)
++++||+++ +.++.++|+++|+++.+...+++..++
T Consensus 329 ------~~~iRis~~-----~~~~~~~l~~al~~~~~~~~~~~~~~~ 364 (366)
T PRK01533 329 ------PNGVRITVG-----TREQNEGVISVLQQHFENKKRKSRDEA 364 (366)
T ss_pred ------CCceEEeCC-----CHHHHHHHHHHHHHHHHhccccccccc
Confidence 257999995 789999999999999887766665554
No 221
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.62 E-value=3.3e-13 Score=136.31 Aligned_cols=151 Identities=13% Similarity=0.112 Sum_probs=103.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC--CCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER--GQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~--g~id~e 81 (448)
..++|+|+++++..++.+. . ++ .|+++...+..+...++..|. +++.++.+.+ +.+| +
T Consensus 73 ~i~it~Ga~~~l~~~~~~~-~--------------~~-~v~i~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d-~ 132 (354)
T PRK06358 73 NVILGNGATELIFNIVKVT-K--------------PK-KVLILAPTFAEYERALKAFDA---EIEYAELTEETNFAAN-E 132 (354)
T ss_pred hEEECCCHHHHHHHHHHHh-C--------------CC-cEEEecCChHHHHHHHHHcCC---eeEEEeCccccCCCcc-H
Confidence 4689999999987776542 2 32 466788888888888888888 7888888643 4678 5
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCcc--
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRAN-- 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD-- 156 (448)
++.+.+.+ ++++|++++++|+||...+ +++|.++|++||+++++|++|.-....... ......+...+
T Consensus 133 ~~~~~~~~------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~-~~~~~~~~~~~~v 205 (354)
T PRK06358 133 IVLEEIKE------EIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENET-ISMINYLENFKNL 205 (354)
T ss_pred HHHHhhcc------CCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccc-hhHHHhccCCCCE
Confidence 55555532 4778889999999998876 788888999999999999998744321110 00011111111
Q ss_pred EEEECCccccCCC-CceEEEEEeccc
Q psy14299 157 SVSWNPHKMLGAP-LQCSILLIKEKG 181 (448)
Q Consensus 157 ~~~~s~hK~l~~P-~g~G~l~vr~~~ 181 (448)
++..|+.|.++.| .-+|+++..++.
T Consensus 206 i~~~S~SK~~gl~G~RiG~lv~~~~~ 231 (354)
T PRK06358 206 IIIRAFTKFFAIPGLRLGYGLTSNKN 231 (354)
T ss_pred EEEEechhhccCcchhheeeecCCHH
Confidence 5567889988744 556776654433
No 222
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.62 E-value=2.7e-13 Score=138.16 Aligned_cols=147 Identities=12% Similarity=0.050 Sum_probs=109.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH-HhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH-WLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~-~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
.+++++||++++..++.+... +++.|+++...|.+....+. +.+....++..++. .|+++
T Consensus 68 ~v~~~~gg~~Ai~~~l~all~--------------~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~-----~d~~~ 128 (382)
T TIGR02080 68 GAVVTNTGMSAIHLVTTALLG--------------PDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ-----GDEQA 128 (382)
T ss_pred cEEEEcCHHHHHHHHHHHHcC--------------CCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC-----CCHHH
Confidence 478999999998877766533 56788889888886555443 23332224444432 38899
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
+++++++ ++++|+++.++|++|.+.|+++|.++||++|++++||.+|..+....+ . . . ++|+++.|+
T Consensus 129 l~~ai~~------~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~p-l----~-~-gaDivv~S~ 195 (382)
T TIGR02080 129 LRAALAQ------KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNP-L----A-L-GADLVLHSC 195 (382)
T ss_pred HHHhcCc------CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCc-h----h-h-CCCEEEeec
Confidence 9998854 478999999999999999999999999999999999999976643211 1 0 1 479999999
Q ss_pred ccccCCCCc--eEEEEEeccch
Q psy14299 163 HKMLGAPLQ--CSILLIKEKGL 182 (448)
Q Consensus 163 hK~l~~P~g--~G~l~vr~~~~ 182 (448)
+|+++++.+ .|++..++++.
T Consensus 196 sK~l~G~~~~~~G~i~~~~~~~ 217 (382)
T TIGR02080 196 TKYLNGHSDVIAGAVIAKDPQV 217 (382)
T ss_pred ceeccCCCCceeEEEEeCCHHH
Confidence 999998877 66666655543
No 223
>PLN02231 alanine transaminase
Probab=99.62 E-value=5.5e-13 Score=141.16 Aligned_cols=121 Identities=12% Similarity=0.043 Sum_probs=100.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|+++++.+++.+.... +++.|+++...+..+...++..|. +++.++.++ ++.+|++
T Consensus 193 ~I~iT~Ga~~ai~~~~~~l~~~-------------~gd~Vli~~P~Y~~y~~~~~~~g~---~~v~~~l~~~~~~~~d~~ 256 (534)
T PLN02231 193 DIFLTDGASPAVHMMMQLLIRS-------------EKDGILCPIPQYPLYSASIALHGG---TLVPYYLDEATGWGLEIS 256 (534)
T ss_pred cEEEeCCHHHHHHHHHHHhccC-------------CCCEEEEeCCCChhHHHHHHHcCC---EEEEEecCcccCCCCCHH
Confidence 4789999999988887776542 567799999999999999999888 788888875 3689999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLI 140 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~ 140 (448)
+|++++++....+.++++++++.++|+||.+.+ +++|.++|++||++++.|.+|.-..+
T Consensus 257 ~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y 318 (534)
T PLN02231 257 ELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVY 318 (534)
T ss_pred HHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhccc
Confidence 999999765444446889999999999998754 67889999999999999999886544
No 224
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.62 E-value=3.2e-13 Score=135.12 Aligned_cols=151 Identities=15% Similarity=0.082 Sum_probs=100.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++.+++. +.. ++.+|+ .+..+..+...++..|. +++.+|.++ ..+|++.+
T Consensus 59 ~I~it~Gs~~~l~~~~~-~~~--------------~~~vv~-~~P~y~~y~~~~~~~G~---~v~~vp~~~-~~~~~~~l 118 (332)
T PRK06425 59 KVLIGPGLTHFIYRLLS-YIN--------------VGNIII-VEPNFNEYKGYAFTHGI---RISALPFNL-INNNPEIL 118 (332)
T ss_pred eEEECCCHHHHHHHHHH-HhC--------------CCcEEE-eCCChHHHHHHHHHcCC---eEEEEeCCc-ccCcHHHH
Confidence 47899999999877764 222 444444 47888899999999999 799999864 34455444
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccc-cchhhhhcCCCCccEEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFS-EKYSFVLKGINRANSVS 159 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~-~~~~~~~~~~~~aD~~~ 159 (448)
+ + .++++|+++.++|+||.+.+ +++|.++|++||+++++|.++.-..... +......... .--+++
T Consensus 119 ~----~-----~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~-~~vi~~ 188 (332)
T PRK06425 119 N----N-----YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSY-GNVIIG 188 (332)
T ss_pred h----h-----cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccC-CCEEEE
Confidence 3 2 14778999999999998877 5667778899999999999987543211 0001111110 012555
Q ss_pred ECCccccCCC-CceEEEEEeccchhhh
Q psy14299 160 WNPHKMLGAP-LQCSILLIKEKGLLHQ 185 (448)
Q Consensus 160 ~s~hK~l~~P-~g~G~l~vr~~~~~~~ 185 (448)
.|+.|.++.| .-+|+++. ++++...
T Consensus 189 ~SfSK~~~l~GlRiGy~v~-~~~li~~ 214 (332)
T PRK06425 189 RSLTKILGIPSLRIGYIAT-DDYNMKI 214 (332)
T ss_pred eecHHhcCCchhhheeeec-CHHHHHH
Confidence 6889998855 33577665 3344433
No 225
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.62 E-value=2.1e-13 Score=138.75 Aligned_cols=153 Identities=16% Similarity=0.165 Sum_probs=113.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-CCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-GQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-g~id~e~ 82 (448)
..++|+|||+++.+++.++.- .|++.|+++..+|.+...++...|. +++.++.+++ +.+|+++
T Consensus 48 ~~v~~~sgt~aL~~~l~al~~-------------~pGd~Viv~~~t~~~~~~~~~~~G~---~~v~vd~d~~~~~~d~~~ 111 (376)
T TIGR02379 48 KALLTPSCTAALEMAALLLDI-------------QPGDEVIMPSYTFVSTANAFVLRGA---KIVFVDIRPDTMNIDETL 111 (376)
T ss_pred eEEEeCCHHHHHHHHHHHcCC-------------CCcCEEEECCCCcHHHHHHHHHcCC---EEEEEecCCCcCCCCHHH
Confidence 468999999997777654311 2678899999999999999998888 7899999876 5899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
+++++.+ ++++|+.++ ++|...|+++|.++|++||+++++|+||+.+...... + +.. ..|+.++|+
T Consensus 112 le~~i~~------~tk~Iip~~---~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~-~--~g~--~~~~~~fSf 177 (376)
T TIGR02379 112 IESAITH------RTKAIVPVH---YAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGR-A--LGS--IGHLGTFSF 177 (376)
T ss_pred HHHhcCc------CceEEEEeC---CCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCc-c--cCC--CCCEEEEeC
Confidence 9998854 477887554 5799999999999999999999999999987642111 1 111 236667776
Q ss_pred cc--ccCCCCceEEEEEeccchhhhh
Q psy14299 163 HK--MLGAPLQCSILLIKEKGLLHQA 186 (448)
Q Consensus 163 hK--~l~~P~g~G~l~vr~~~~~~~~ 186 (448)
|+ .+..-...|+++++++++....
T Consensus 178 ~~~K~l~~g~~gG~v~~~~~~~~~~~ 203 (376)
T TIGR02379 178 HETKNYTSGGEGGALLINDQAFIERA 203 (376)
T ss_pred CCCCcCcccCCceEEEECCHHHHHHH
Confidence 64 4432113566677666554443
No 226
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.62 E-value=9e-14 Score=143.94 Aligned_cols=157 Identities=14% Similarity=0.141 Sum_probs=116.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC-CCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN-ERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~-~~g~id~e~ 82 (448)
.+++|+|||+++..++.++..... ...++ .+++.|+++..+|.+...++...|. .++.++++ +++.+|+++
T Consensus 80 ~~v~~~sGt~al~~aL~al~~~~~---~~~~~--~pGd~VIv~~~t~~a~~~~v~~~G~---~pv~vdvd~~~~~id~~~ 151 (438)
T PRK15407 80 YALLVNSGSSANLLAFSALTSPKL---GDRAL--KPGDEVITVAAGFPTTVNPIIQNGL---VPVFVDVELPTYNIDASL 151 (438)
T ss_pred eEEEECCHHHHHHHHHHHHhhccc---cccCC--CCCCEEEECCCCcHHHHHHHHHcCC---EEEEEecCCCcCCcCHHH
Confidence 478999999999999877643211 01122 2678899999999999999998888 67888876 467899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
+++.+.+ ++++|++++. .|...|+++|.++|++||+++++|+||+.|....... +.. ..|+.++|+
T Consensus 152 le~~i~~------~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~---~G~--~gd~~~fSf 217 (438)
T PRK15407 152 LEAAVSP------KTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRM---TGT--FGDIATLSF 217 (438)
T ss_pred HHHHcCc------CCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCee---eec--cCceEEEeC
Confidence 9998854 5788888874 6778899999999999999999999999988753321 111 236666666
Q ss_pred c--cccCCCCceEEEEEeccchh
Q psy14299 163 H--KMLGAPLQCSILLIKEKGLL 183 (448)
Q Consensus 163 h--K~l~~P~g~G~l~vr~~~~~ 183 (448)
| |.+.+-.| |+++++++++.
T Consensus 218 ~~~k~~~~geG-G~l~t~d~~l~ 239 (438)
T PRK15407 218 YPAHHITMGEG-GAVFTNDPLLK 239 (438)
T ss_pred CCCCCccccCc-eEEEECCHHHH
Confidence 5 55554333 77888776543
No 227
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.61 E-value=5.1e-13 Score=137.17 Aligned_cols=288 Identities=16% Similarity=0.109 Sum_probs=169.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCC-chHHHHHHHHhCC-------C--CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDS-HYSMLKAAHWLGI-------G--MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~-H~s~~~~~~~~g~-------~--~~~v~~v~~~ 73 (448)
..+|+++|++||..|+..+|.... +..|+. ..+..|+..+.. |-+...+....+- + ...+..+|.+
T Consensus 96 ~~~~~~SGs~A~e~ai~~a~~~~~---~~~~~~-~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (401)
T TIGR01885 96 KVLPMNTGAEAVETAIKLARKWGY---KVKGIP-ENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYN 171 (401)
T ss_pred EEEEeCccHHHHHHHHHHHHHHhh---hhcCCC-CCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCC
Confidence 468999999999999999877411 111222 124456666666 4466666655431 0 0123444443
Q ss_pred CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccch-hhh
Q psy14299 74 ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKY-SFV 148 (448)
Q Consensus 74 ~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~-~~~ 148 (448)
|+++|++.+++. +.+..+|++....+++|.+.| +++|.++|++||+++++|++|.+ ....... ...
T Consensus 172 -----d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g-~g~~G~~~~~~ 242 (401)
T TIGR01885 172 -----NLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTG-LGRTGKLLCVD 242 (401)
T ss_pred -----CHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC-CCccchhhHHh
Confidence 789999998642 235667888778888899887 99999999999999999999753 2111111 111
Q ss_pred hcCCCCccEEEECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHH
Q psy14299 149 LKGINRANSVSWNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMW 227 (448)
Q Consensus 149 ~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (448)
..++ ..|+++++ |.+++. ..+|+++.+ +++...... .+.. . ++ .+
T Consensus 243 ~~~~-~~di~~~g--K~l~~g~~~ig~v~~~-~~i~~~~~~---~~~~--~------------t~-~~------------ 288 (401)
T TIGR01885 243 HENV-KPDIVLLG--KALSGGVYPVSAVLAD-DDVMLTIKP---GEHG--S------------TY-GG------------ 288 (401)
T ss_pred hcCC-CCCEEEee--ccccCCCCCcEEEEEc-HHHHhhccC---CCCC--C------------CC-CC------------
Confidence 1223 36888765 988754 345666654 344332211 0000 0 00 00
Q ss_pred HHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHH
Q psy14299 228 KARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLM 307 (448)
Q Consensus 228 ~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (448)
+.+.......+
T Consensus 289 ---------------------------------------------------------------------~p~~~~aa~a~ 299 (401)
T TIGR01885 289 ---------------------------------------------------------------------NPLACAVAVAA 299 (401)
T ss_pred ---------------------------------------------------------------------CHHHHHHHHHH
Confidence 01111122233
Q ss_pred HHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEec-cCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHH
Q psy14299 308 WKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVI-PEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV 386 (448)
Q Consensus 308 ~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~ 386 (448)
++.+..++ +.++..++++++++.|+++ +..++. ..+...++.+.+.++.. .....++.+.|.
T Consensus 300 L~~i~~~~---l~~~~~~~~~~~~~~L~~l-~~~~~~~~~g~g~~~~i~~~~~~~-------------~~~~~~l~~~l~ 362 (401)
T TIGR01885 300 LEVLEEEK---LAENAEKLGEIFRDQLKKL-PKPIITEVRGRGLLNAIVIDESKT-------------GRTAWDLCLKLK 362 (401)
T ss_pred HHHHHhcc---HHHHHHHHHHHHHHHHHhc-cCCceeEEeecCeeEEEEeccCcc-------------hhHHHHHHHHHH
Confidence 44433333 3356667789999999987 333331 11233444443322110 012347889999
Q ss_pred hCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHH
Q psy14299 387 LGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRG 433 (448)
Q Consensus 387 ~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~ 433 (448)
++| +++.+. +. +.+||++ +..+|++||++++++|++..
T Consensus 363 ~~G-v~v~~~---~~---~~lRi~p--~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 363 EKG-LLAKPT---HG---NIIRLAP--PLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred hCC-EEEEec---CC---CEEEEeC--CccCCHHHHHHHHHHHHHHh
Confidence 999 555442 22 6899999 78999999999999998764
No 228
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.61 E-value=5.8e-13 Score=135.02 Aligned_cols=157 Identities=10% Similarity=-0.014 Sum_probs=106.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--C-CCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--R-GQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~-g~id~ 80 (448)
..++|+|+++++.+++.+...+ .++.|+++...+..+...++..|. +++.+|.+. + ..+|+
T Consensus 78 ~I~~t~G~~~~l~~~~~~~~~~-------------g~~~vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~ 141 (364)
T PRK04781 78 QLLIGRGSDEAIDLLVRALCVP-------------GRDAVLVTPPVFGMYAVCARLQNA---PLVEVPLVDGADGFHADV 141 (364)
T ss_pred HEEEeCCHHHHHHHHHHHhcCC-------------CCCeEEEcCCChHHHHHHHHHcCC---EEEEEecCCCccCCCcCH
Confidence 4689999999987777655432 225677887777777777788888 788998742 2 36788
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHH--cCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEK--YDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~--~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
+++++.+.. .++++|++++++|+||.+.|.+++.++++. +++++++|+++.-.... +.....+.... -=++
T Consensus 142 ~~l~~~~~~-----~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~-~~~~~~~~~~~-~vi~ 214 (364)
T PRK04781 142 PAIVAAALA-----SNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDV-PSAVGLLARYD-NLAV 214 (364)
T ss_pred HHHHHHHhc-----cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCC-cchHHHHhhCC-CEEE
Confidence 888765532 257899999999999999999888888875 48999999998744321 11001111111 1156
Q ss_pred EECCccccCCC-CceEEEEEeccchhh
Q psy14299 159 SWNPHKMLGAP-LQCSILLIKEKGLLH 184 (448)
Q Consensus 159 ~~s~hK~l~~P-~g~G~l~vr~~~~~~ 184 (448)
+-|+.|.++.| .-+|+++. ++++..
T Consensus 215 ~~SfSK~~gl~GlRvGy~v~-~~~l~~ 240 (364)
T PRK04781 215 LRTLSKAHALAAARIGSLIA-NAELIA 240 (364)
T ss_pred EecChhhcccccceeeeeeC-CHHHHH
Confidence 67899988754 44677665 444443
No 229
>PRK09148 aminotransferase; Validated
Probab=99.61 E-value=4.1e-13 Score=138.04 Aligned_cols=158 Identities=10% Similarity=0.028 Sum_probs=109.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++.+++.+.+. +++.|+++...+..+...+...|. ++..++.+.++. +++++
T Consensus 94 ~I~it~G~~~al~~~~~~l~~--------------~gd~Vl~~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~-~~~~l 155 (405)
T PRK09148 94 QVVATLGSKEGFANMAQAITA--------------PGDVILCPNPSYPIHAFGFIMAGG---VIRSVPAEPDEE-FFPAL 155 (405)
T ss_pred cEEEcCChHHHHHHHHHHhcC--------------CCCEEEEcCCCCcccHHHHHhcCC---EEEEEeCCCCCC-CccCH
Confidence 478999999998877766544 567788899999988888888888 788999865543 35566
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCH---HHHHHHHHHcCCEEEEecccccccccccchhh--hhcCCCCccEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPL---DEIATVCEKYDLWMHVDACWGGSLIFSEKYSF--VLKGINRANSV 158 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l---~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~--~~~~~~~aD~~ 158 (448)
++.++.. ..++++|+++.++|+||.+.+. ++|.++|++||+++++|++|+...+....... .+.+.....++
T Consensus 156 ~~~~~~~---~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~ 232 (405)
T PRK09148 156 ERAVRHS---IPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVE 232 (405)
T ss_pred HHHHhhc---cccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEE
Confidence 6666432 1357899999999999998885 67889999999999999998854331110000 01111112245
Q ss_pred EECCccccCCC-CceEEEEEeccchh
Q psy14299 159 SWNPHKMLGAP-LQCSILLIKEKGLL 183 (448)
Q Consensus 159 ~~s~hK~l~~P-~g~G~l~vr~~~~~ 183 (448)
+.|+.|.++.| .-+|+++. ++.++
T Consensus 233 ~~SfSK~~~~pGlR~G~~v~-~~~~i 257 (405)
T PRK09148 233 FTSMSKTFSMAGWRMGFAVG-NERLI 257 (405)
T ss_pred EeccccccCCcchheeeeeC-CHHHH
Confidence 78899988755 23666654 43333
No 230
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.61 E-value=2.6e-13 Score=139.25 Aligned_cols=145 Identities=14% Similarity=0.086 Sum_probs=108.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH----HHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML----KAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~----~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++|+.++.+++..... +++.|+++...|.... ..++..|+ ++..++.+ |
T Consensus 82 ~~i~~~sG~~Al~~~l~~ll~--------------~Gd~Viv~~~~y~~t~~~~~~~~~~~G~---~v~~vd~~-----d 139 (403)
T PRK07503 82 AAVALASGMGAITATLWTLLR--------------PGDEVIVDQTLYGCTFAFLHHGLGEFGV---TVRHVDLT-----D 139 (403)
T ss_pred cEEEEcCHHHHHHHHHHHHcC--------------CCCEEEEccCccchHHHHHHHHHhhCCE---EEEEeCCC-----C
Confidence 367888999998777765422 6677888887775433 33445566 67777664 7
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++.+++|++|.+.|+++|+++|+++|+++++|++|+.+....+ + +. .+|+++
T Consensus 140 ~~~l~~~i~~------~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~-----l-~~-g~Di~v 206 (403)
T PRK07503 140 PAALKAAISD------KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRP-----L-EL-GADLVV 206 (403)
T ss_pred HHHHHHhcCc------cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCc-----h-hh-CCCEEE
Confidence 9999998854 478999999999999999999999999999999999999986543211 1 11 479999
Q ss_pred ECCccccCCCCc--eEEEEEeccchhh
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKEKGLLH 184 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~~~~~~ 184 (448)
.|++|++++|.+ .|+++ .++++..
T Consensus 207 ~S~tK~l~g~gd~~gG~v~-~~~~l~~ 232 (403)
T PRK07503 207 HSATKYLGGHGDITAGLVV-GGKALAD 232 (403)
T ss_pred ccccccccCCCceeEEEEE-cCHHHHH
Confidence 999999998865 56665 4544433
No 231
>PRK08175 aminotransferase; Validated
Probab=99.61 E-value=3.7e-13 Score=137.94 Aligned_cols=157 Identities=11% Similarity=0.037 Sum_probs=110.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++.+.+..... +++.|+++...|......++..|. ++..++.++++ .+++++
T Consensus 93 ~i~~t~G~~~~l~~~~~~~~~--------------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~-~~~~~l 154 (395)
T PRK08175 93 EAIVTIGSKEGLAHLMLATLD--------------HGDTVLVPNPSYPIHIYGAVIAGA---QVRSVPLVEGV-DFFNEL 154 (395)
T ss_pred cEEEccCcHHHHHHHHHHhCC--------------CCCEEEEcCCCCcchHHHHHHcCC---eEEEEecccCC-CcHHHH
Confidence 478899999997665544433 567899999999988888888888 78889887544 358889
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCH---HHHHHHHHHcCCEEEEecccccccccccchhhhhcCC---CCccE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPL---DEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGI---NRANS 157 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l---~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~---~~aD~ 157 (448)
+++++.. ..++++|++++++|+||...+. ++|.++|++||+++++|.+++..... +.....+..+ ....+
T Consensus 155 ~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~-~~~~~~~~~~~~~~~~~i 230 (395)
T PRK08175 155 ERAIRES---YPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYD-GWKAPSIMQVPGAKDVAV 230 (395)
T ss_pred HHHHhhc---cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccC-CCCCcchhcCCCcccCEE
Confidence 9888642 2357889999999999988776 78999999999999999998754321 1000111111 11225
Q ss_pred EEECCccccCCCC-ceEEEEEeccchh
Q psy14299 158 VSWNPHKMLGAPL-QCSILLIKEKGLL 183 (448)
Q Consensus 158 ~~~s~hK~l~~P~-g~G~l~vr~~~~~ 183 (448)
++.++.|.++.|. -+|+++. ++++.
T Consensus 231 ~~~S~SK~~g~pGlRiG~~~~-~~~l~ 256 (395)
T PRK08175 231 EFFTLSKSYNMAGWRIGFMVG-NPELV 256 (395)
T ss_pred EEeeccccccCcchhheeeeC-CHHHH
Confidence 5688999987663 2566654 44433
No 232
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=4.1e-13 Score=138.53 Aligned_cols=140 Identities=12% Similarity=0.060 Sum_probs=104.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHH----hCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHW----LGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~----~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++|+.++..++.+... +++.|+++...+......+.. .|+ .+..++. .|
T Consensus 75 ~~l~~ssG~~Ai~~al~al~~--------------~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi---~v~~~d~-----~d 132 (425)
T PRK06084 75 GALAVASGMAAITYAIQTIAE--------------AGDNIVSVAKLYGGTYNLLAHTLPRIGI---ETRFAAH-----DD 132 (425)
T ss_pred ceeEehhHHHHHHHHHHHHhC--------------CCCEEEEeCCCcchHHHHHHHhccccee---EEEEECC-----CC
Confidence 468899999998888876654 456677777766644444332 233 4444543 38
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|+++.++|++|.+.|+++|.++||++|++++||++++.+....+ + . .++|+++
T Consensus 133 ~e~le~ai~~------~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~~p-----~-~-~gaDivv 199 (425)
T PRK06084 133 IAALEALIDE------RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLCRP-----F-E-HGADIVV 199 (425)
T ss_pred HHHHHHHhcc------CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCCh-----h-h-cCCCEEE
Confidence 9999999865 478999999999999999999999999999999999999986654211 1 1 1489999
Q ss_pred ECCccccCCCCc-eEEEEEe
Q psy14299 160 WNPHKMLGAPLQ-CSILLIK 178 (448)
Q Consensus 160 ~s~hK~l~~P~g-~G~l~vr 178 (448)
.|++|++++|.. .|.+++.
T Consensus 200 ~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 200 HSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred ECchhcccccccceeEEEEe
Confidence 999999998753 3444443
No 233
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.61 E-value=2.5e-13 Score=134.17 Aligned_cols=271 Identities=15% Similarity=0.165 Sum_probs=184.2
Q ss_pred CeEEEecCCCchHHHHHHHHh--CCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc-cccCHH
Q psy14299 40 PLCMFTSEDSHYSMLKAAHWL--GIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG-AFDPLD 116 (448)
Q Consensus 40 ~~~Vl~~~~~H~s~~~~~~~~--g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG-~~~~l~ 116 (448)
...++++...|+......+-. +.+. ++...+.+ |.++|++. ++ ..+..|++..+++ .| ...|++
T Consensus 164 ~~~~~V~~~vhpqt~~Vl~Tra~~~g~-~i~~~~~~-----d~~~l~~~-~~-----~~~~gv~vQyP~~-~G~~~~d~~ 230 (450)
T COG0403 164 RNKFLVPKDVHPQTLDVLRTRAEGLGI-EIEVVDAD-----DLDDLESA-DD-----GDVFGVLVQYPNT-FGIVEEDLR 230 (450)
T ss_pred CceEEecCCCCHHHHHHHHhhcccCce-EEEEeccc-----hhhhhhhc-cc-----cCeEEEEEecCCC-CCccchhHH
Confidence 456999999999988877633 3322 56666655 78888887 33 2477899999887 77 778899
Q ss_pred HHHHHHHHcCCEEEEec-ccccccccccchhhhhcCCCCccEEEECCccc-----cCCCCceEEEEEeccchhhhhccCC
Q psy14299 117 EIATVCEKYDLWMHVDA-CWGGSLIFSEKYSFVLKGINRANSVSWNPHKM-----LGAPLQCSILLIKEKGLLHQANATA 190 (448)
Q Consensus 117 ~I~~ia~~~g~~l~VD~-A~~~~~~~~~~~~~~~~~~~~aD~~~~s~hK~-----l~~P~g~G~l~vr~~~~~~~~~~~~ 190 (448)
+|.+.+|++|+.++|=. --+.+.+..| |--++|+++.+++.+ +|+|. +|+|.++++- . +..
T Consensus 231 ~l~~~~h~~~al~~v~aDplaL~LL~pP-------Ge~GADIvvG~~QrfGvPmgfGGPh-ag~fA~~~~~-~----R~m 297 (450)
T COG0403 231 ALIEAAHSAGALVIVAADPLALGLLKPP-------GEFGADIVVGSAQRFGVPMGFGGPH-AGYFAVKDEF-K----RQM 297 (450)
T ss_pred HHHHHHhhcCCEEEEEechhHhhccCCc-------cccCCceEEecCcccCCCcCCCCcc-eeeeeEhHhH-h----hcC
Confidence 99999999999887643 1122222111 112589999999973 34454 7888887752 2 234
Q ss_pred cccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH---HHHhhhhccCCCccchhhhhhhhhhhhhh
Q psy14299 191 ATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF---VDNAVDCSRGSMTFSTLLCFDLQGLLHQA 267 (448)
Q Consensus 191 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (448)
|+-+-..+.. ..|..+++=. =++++++.|+.|+|||
T Consensus 298 PGRlVG~S~D----------------------------~~G~~A~rLaLQTREQHIRReKATSNICT------------- 336 (450)
T COG0403 298 PGRLVGVSVD----------------------------AAGKRAFRLALQTREQHIRREKATSNICT------------- 336 (450)
T ss_pred CCceeeeeec----------------------------CCCCchhhhhHHHHHHHHhhhccchhhhH-------------
Confidence 4544332211 1122222222 2688999999999999
Q ss_pred hhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCC-CeEEeccC
Q psy14299 268 NATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRP-GFRLVIPE 346 (448)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~p-g~~l~~~~ 346 (448)
|++.+ ++.......+.|.+|+.++..+.++++.++.++|+++. |++++ .+
T Consensus 337 nQaLl----------------------------A~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~-~~ 387 (450)
T COG0403 337 NQALL----------------------------ALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELV-FD 387 (450)
T ss_pred HHHHH----------------------------HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEec-cc
Confidence 44433 56677788899999999999999999999999999763 68987 66
Q ss_pred CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHH
Q psy14299 347 FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAI 426 (448)
Q Consensus 347 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~ 426 (448)
..+..+.+++.. .....+.++....|+ -+ ..... ..+-+++ ...+|++||+.|+
T Consensus 388 ~fFdt~~v~~~~-----------------~~~~~l~~~~~~~G~-~L--~~~~~----~~~~ia~--tEt~t~~~i~~l~ 441 (450)
T COG0403 388 HFFDTFTVRVPE-----------------EVAEALLAAAIAGGI-NL--RRVDA----DTVLIAL--TETTTKEDIDALV 441 (450)
T ss_pred cceeeEEEecch-----------------hHHHHHHHHHHhcCC-ce--eeecC----CceEEEe--ecccCHHHHHHHH
Confidence 667777776421 123356666666662 11 11112 3566888 6889999999999
Q ss_pred HHHHHH
Q psy14299 427 DQIELR 432 (448)
Q Consensus 427 ~al~~~ 432 (448)
+++...
T Consensus 442 ~~~~~~ 447 (450)
T COG0403 442 AAFGGV 447 (450)
T ss_pred HHHhhh
Confidence 998764
No 234
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.60 E-value=2.2e-13 Score=137.99 Aligned_cols=151 Identities=13% Similarity=0.150 Sum_probs=108.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC-CCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN-ERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~-~~g~id~e~ 82 (448)
.++.+++||.|+.+++.++--+ +++.|+++..+..+...+....|. .++.++++ +++.||++.
T Consensus 42 ~~~~~~sgt~Al~~al~~l~~~-------------~gdeVi~p~~t~~~~~~ai~~~G~---~pv~~Di~~~~~~id~~~ 105 (363)
T PF01041_consen 42 YAVAVSSGTSALHLALRALGLG-------------PGDEVIVPAYTFPATASAILWAGA---EPVFVDIDPETLNIDPEA 105 (363)
T ss_dssp EEEEESSHHHHHHHHHHHTTGG-------------TTSEEEEESSS-THHHHHHHHTT----EEEEE-BETTTSSB-HHH
T ss_pred eEEEeCChhHHHHHHHHhcCCC-------------cCceEecCCCcchHHHHHHHHhcc---EEEEEeccCCcCCcCHHH
Confidence 4789999999999998774332 778899999999999999999999 88999998 678999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
+++++.+ ++++|+++| ..|...|+++|.++|+++|++++-|+||+.|...-... + | ...|+.++|+
T Consensus 106 ~~~~i~~------~t~ai~~~h---~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~---~-G-~~gd~~~fSf 171 (363)
T PF01041_consen 106 LEKAITP------KTKAILVVH---LFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRP---V-G-SFGDIAIFSF 171 (363)
T ss_dssp HHHHHHT------TEEEEEEE----GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEE---T-T-SSSSEEEEES
T ss_pred HHHHhcc------CccEEEEec---CCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEe---c-c-CCCCceEecC
Confidence 9999986 478888876 46777899999999999999999999999987643221 1 1 1347777776
Q ss_pred c--cccCCCCceEEEEEeccchhhh
Q psy14299 163 H--KMLGAPLQCSILLIKEKGLLHQ 185 (448)
Q Consensus 163 h--K~l~~P~g~G~l~vr~~~~~~~ 185 (448)
| |.+.+. ..|+++++++++...
T Consensus 172 ~~~K~i~~g-eGG~v~~~~~~~~~~ 195 (363)
T PF01041_consen 172 HPTKIITTG-EGGAVVTNDPELAER 195 (363)
T ss_dssp STTSSS-SS-S-EEEEESTHHHHHH
T ss_pred CCCCCCcCC-CCeeEEecHHHHHHH
Confidence 5 877433 346677777654433
No 235
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.60 E-value=7e-13 Score=136.46 Aligned_cols=161 Identities=16% Similarity=0.157 Sum_probs=110.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCch-HHHHHHHHhCCCCCcEEEEecCC--------
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHY-SMLKAAHWLGIGMDNVIRVKTNE-------- 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~-s~~~~~~~~g~~~~~v~~v~~~~-------- 74 (448)
.+++|+|||+|+.+++.+..+ |++.| ++ ..|+ +......+.|. ..+.+++++
T Consensus 70 ~vv~t~~Gt~Al~la~~al~~--------------pGD~V-~~-~~~f~~~~~~i~~~Ga---~pv~v~i~~~~~~~~~~ 130 (431)
T cd00617 70 HIIPTHQGRGAENILFSILLK--------------PGRTV-PS-NMHFDTTRGHIEANGA---VPVDLVIDEAHDAQELI 130 (431)
T ss_pred eEEEcCCHHHHHHHHHHHhCC--------------CCCEE-cc-CCcccchHHHHHhCCC---EeEEEeccccccccccc
Confidence 468999999999998876644 56666 34 4555 45556677787 677777752
Q ss_pred --CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcc-cccc---CHHHHHHHHHHcCCEEEEecccccccc-cc----c
Q psy14299 75 --RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVL-GAFD---PLDEIATVCEKYDLWMHVDACWGGSLI-FS----E 143 (448)
Q Consensus 75 --~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~t-G~~~---~l~~I~~ia~~~g~~l~VD~A~~~~~~-~~----~ 143 (448)
.|.+|+++|+++|.+. ...++++|+++.++|++ |... ++++|.++|++||+++|.|+|+..+.. +. +
T Consensus 131 pf~gniD~e~Le~~I~~~--~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~ 208 (431)
T cd00617 131 PFKGNIDVAKLEKLIDEV--GAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREE 208 (431)
T ss_pred CCCCCcCHHHHHHHhCcc--cCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccc
Confidence 3569999999999752 11247789999999987 7665 567889999999999999999775421 11 1
Q ss_pred chh-hhh-----cCCCCccEEEECCccccCCCCceEEEEEeccchhhhh
Q psy14299 144 KYS-FVL-----KGINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQA 186 (448)
Q Consensus 144 ~~~-~~~-----~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~ 186 (448)
... ..+ .-.+.+|++++|+||.+++|. .|+++.+++++....
T Consensus 209 g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~-GG~i~~~d~~l~~~~ 256 (431)
T cd00617 209 GYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI-GGFLALRDDELYEEA 256 (431)
T ss_pred cccCCCHHHHHHHhhccCCEEEEEeecCCCCcc-ceEEEeCcHHHHHHH
Confidence 100 000 011358999999999988876 345556554454443
No 236
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.59 E-value=8.5e-14 Score=140.48 Aligned_cols=291 Identities=15% Similarity=0.168 Sum_probs=163.6
Q ss_pred eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCC---chHHHHHHHH-------hCCCCCcEEEEecC-CCC
Q psy14299 8 LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDS---HYSMLKAAHW-------LGIGMDNVIRVKTN-ERG 76 (448)
Q Consensus 8 t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~---H~s~~~~~~~-------~g~~~~~v~~v~~~-~~g 76 (448)
..+|+.||+.+..+..+ |++.|+.-+.. |.|--..... ... ++...+++ +++
T Consensus 92 p~SGs~An~av~~aLl~--------------pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~---~~~~y~~d~~~~ 154 (399)
T PF00464_consen 92 PHSGSQANLAVYMALLK--------------PGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYF---ESVPYPVDPDTG 154 (399)
T ss_dssp -SSHHHHHHHHHHHHT---------------TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHS---EEEEEEB-TTTS
T ss_pred cCCchHHHHHHHHHHHh--------------hcCcEEecChhhcccccccccccccccccccceE---EEEeeeeecCCC
Confidence 46899999888877765 55555544333 3332221111 123 46677887 578
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCcc
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRAN 156 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD 156 (448)
.||.+++++.+++. +|++|++....+ -...|++++.+||++.|+++++|.||-+|.......+.- ++.+|
T Consensus 155 ~ID~d~l~~~a~~~-----kPklIi~G~S~y--~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P---~~~AD 224 (399)
T PF00464_consen 155 LIDYDELEKLAKEH-----KPKLIICGASSY--PRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNP---FPYAD 224 (399)
T ss_dssp SB-HHHHHHHHHHH-------SEEEEE-SST--SS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--G---CCTSS
T ss_pred eECHHHHHHHHhhc-----CCCEEEECchhc--cCccCHHHHHHHHHhcCcEEEecccccccceehheecCc---cccce
Confidence 99999999999873 688888866443 456889999999999999999999999887755444332 33589
Q ss_pred EEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHH
Q psy14299 157 SVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 236 (448)
Q Consensus 157 ~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~ 236 (448)
+++.+.||.|.+|.| |++++++... .. .....- -...+.
T Consensus 225 vvt~sThKtl~GPrg-giI~~~~~~~--~~-~~~~~~-------------------------------------~~~~l~ 263 (399)
T PF00464_consen 225 VVTGSTHKTLRGPRG-GIILTNKGSK--NV-DKKGKE-------------------------------------IDEELA 263 (399)
T ss_dssp EEEEESSGGG-SSS--EEEEES-SEE--EE--TTS-E-------------------------------------EEHHHH
T ss_pred EEEeeccccccccCc-eEEEEcCCcc--cc-CCcccc-------------------------------------cHHHHH
Confidence 999999999999985 6666652210 00 000000 001112
Q ss_pred HHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccch-hhHHHHHHHHHhcCcc
Q psy14299 237 HFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKV-DAFKLWLMWKARGNLG 315 (448)
Q Consensus 237 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~G 315 (448)
+.|++.+-= .++.++.. -+.++++++.......
T Consensus 264 ~~I~~avfP----------------------------------------------~~qg~~h~~~iaalAval~ea~~~~ 297 (399)
T PF00464_consen 264 EKIDSAVFP----------------------------------------------GLQGGPHMHRIAALAVALKEALSPE 297 (399)
T ss_dssp HHHHHHHTT----------------------------------------------TT-SS--HHHHHHHHHHHHHHTSHH
T ss_pred HHhccccCC----------------------------------------------CcccCcchhHHHHHHHHHhcccCHH
Confidence 222211100 00011111 1234456677766667
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEe
Q psy14299 316 FRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGY 395 (448)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~ 395 (448)
+++..++..++++.|.+.|.+. |++++..-.+.+.+.+.+.+.+++ ..+..+.|.+.| +.+..
T Consensus 298 fk~Ya~qVv~NAk~La~~L~~~-G~~v~~ggTd~H~vlvd~~~~~~~---------------g~~a~~~Le~~g-I~vnk 360 (399)
T PF00464_consen 298 FKEYAKQVVKNAKALAEALQER-GFKVVTGGTDNHQVLVDLRSFGID---------------GKEAEKALEEAG-IIVNK 360 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS-SSSEEEEEGGGGTS----------------HHHHHHHHHHTT-EE-EE
T ss_pred HHHHHHHHHHHHHHHHHHHhhC-CcEEEECCCCCCeEEEEecccccc---------------hHHHHHHHHhcC-eeecc
Confidence 7888999999999999999998 999984345567777765444433 135667777888 55554
Q ss_pred eecCCc---ccccEEEEEecC--CCCCCHHHHHHHHHHH
Q psy14299 396 QPLQHR---NLHNFFRLVTTC--HPASSRQDMDYAIDQI 429 (448)
Q Consensus 396 ~~~~g~---~~~~~lRis~~~--~~~~t~edid~l~~al 429 (448)
..+.+. ..+..||++... .-...++|+..+.+.|
T Consensus 361 n~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 361 NTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp E--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred cccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 433221 113689999830 1123456776666543
No 237
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.59 E-value=3.9e-13 Score=136.79 Aligned_cols=143 Identities=16% Similarity=0.166 Sum_probs=105.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH----HHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA----AHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~----~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++|+.++..++ .... +++.|++++..|.+.... +...|+ +++.++.. |
T Consensus 67 ~~~~~~sG~aai~~~~-~~l~--------------~Gd~Viv~~~~y~~~~~~~~~~~~~~G~---~v~~v~~~-----d 123 (377)
T PRK07671 67 AGFAFGSGMAAITAVM-MLFS--------------SGDHVILTDDVYGGTYRVMTKVLNRFGI---EHTFVDTS-----N 123 (377)
T ss_pred ceEEeCCHHHHHHHHH-HHhC--------------CCCEEEECCCccchHHHHHHHHHhcCCe---EEEEECCC-----C
Confidence 3577888876654433 3222 567788898888754433 233455 67777643 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++++++|++|.+.|+++|.++|+++|++++||++++......+ + .. .+|+++
T Consensus 124 ~~~l~~ai~~------~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p-----~-~~-g~Divv 190 (377)
T PRK07671 124 LEEVEEAIRP------NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQSP-----I-SL-GADIVL 190 (377)
T ss_pred HHHHHHhcCC------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCCh-----h-hh-CCeEEE
Confidence 9999998864 578999999999999999999999999999999999999876443211 1 11 479999
Q ss_pred ECCccccCCCCc--eEEEEEeccch
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKEKGL 182 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~~~~ 182 (448)
.|++|++++|.+ .|+++++++.+
T Consensus 191 ~S~sK~l~G~~~~~~G~~v~~~~~l 215 (377)
T PRK07671 191 HSATKYLGGHSDVVAGLVVVNSPEL 215 (377)
T ss_pred ecCcccccCCccceeEEEEeCcHHH
Confidence 999999999874 56666655544
No 238
>PRK06460 hypothetical protein; Provisional
Probab=99.59 E-value=5.5e-13 Score=135.71 Aligned_cols=142 Identities=15% Similarity=0.066 Sum_probs=98.4
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCc----hHHHHHHHHhCCCCCcEEEEecCCCCCcCH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSH----YSMLKAAHWLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H----~s~~~~~~~~g~~~~~v~~v~~~~~g~id~ 80 (448)
.+++++|++++..++.+..+ +++.|+++...+ ..+...++..|+ ++..++.+ +.
T Consensus 63 ~v~~~sG~~ai~~~l~al~~--------------~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~---~v~~~~~~-----~~ 120 (376)
T PRK06460 63 GVAFSSGMGAISTTALALLK--------------PGNSVLVHRDMFGRSYRFFTDYLKNWGV---NVDASNPG-----SD 120 (376)
T ss_pred EEEeCCHHHHHHHHHHHHhC--------------CCCEEEEecCCcCcHHHHHHHHHHhhCc---EEEEECCC-----CH
Confidence 45667888888777765533 566777775433 234466677777 67777654 22
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
+.+++.++ .++++|++++++|++|.+.|+++|.++|+++|++++||++|+..... .. .. ..+|+++.
T Consensus 121 ~~l~~~~~------~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~-~~---l~---~~~divv~ 187 (376)
T PRK06460 121 NIIEKAKS------KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQ-KP---LE---LGADIVVH 187 (376)
T ss_pred HHHHHhcC------CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccC-Ch---hh---cCCCEEEe
Confidence 33443322 35889999999999999999999999999999999999998754321 11 01 13799999
Q ss_pred CCccccCCCCc--eEEEEEeccch
Q psy14299 161 NPHKMLGAPLQ--CSILLIKEKGL 182 (448)
Q Consensus 161 s~hK~l~~P~g--~G~l~vr~~~~ 182 (448)
|++|+++++.+ .|+++. ++++
T Consensus 188 S~sK~l~G~~~~~~G~~~~-~~~l 210 (376)
T PRK06460 188 SASKFLAGHNDVIAGLAAG-YGKL 210 (376)
T ss_pred ecceeccCCCCceEEEEec-CHHH
Confidence 99999986653 555443 4443
No 239
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.59 E-value=5.4e-13 Score=135.85 Aligned_cols=142 Identities=15% Similarity=0.109 Sum_probs=105.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHH----HHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLK----AAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~----~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++|+.++..++ .+.. +++.|++++..|.+... .+...|+ ++..++.+ |
T Consensus 67 ~al~~~SG~~Al~~~l-~~l~--------------pGd~Vi~~~~~y~~t~~~~~~~~~~~gi---~v~~vd~~-----d 123 (380)
T PRK06176 67 KGFAFASGLAGIHAVF-SLFQ--------------SGDHVLLGDDVYGGTFRLFDKVLVKNGL---SCTIIDTS-----D 123 (380)
T ss_pred CEEEECCHHHHHHHHH-HHcC--------------CCCEEEEcCCChhHHHHHHHHHHHhcCe---EEEEcCCC-----C
Confidence 4578888988765433 3332 66778888887765443 3344455 56666543 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++.+++|++|.+.|+++|+++||+||++++||++++......+ + .. ++|+++
T Consensus 124 ~e~l~~ai~~------~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p-----~-~~-gaDivv 190 (380)
T PRK06176 124 LSQIKKAIKP------NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNP-----L-LL-GADIVV 190 (380)
T ss_pred HHHHHHhcCc------CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCCc-----c-cc-CCCEEE
Confidence 9999998854 588999999999999999999999999999999999999986543211 1 11 589999
Q ss_pred ECCccccCCCCc--eEEEEEeccc
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKEKG 181 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~~~ 181 (448)
+|++|++++|.. .|++..+++.
T Consensus 191 ~S~tK~l~g~~d~~gG~vv~~~~~ 214 (380)
T PRK06176 191 HSGTKYLGGHSDVVAGLVTTNNEA 214 (380)
T ss_pred ecCceeccCCccceeeEEEecHHH
Confidence 999999999874 5555555544
No 240
>PRK05939 hypothetical protein; Provisional
Probab=99.58 E-value=4.8e-13 Score=136.91 Aligned_cols=133 Identities=14% Similarity=0.072 Sum_probs=103.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCch---HHHHHHHHhCCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHY---SMLKAAHWLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~---s~~~~~~~~g~~~~~v~~v~~~~~g~id~ 80 (448)
..+.+++|+.|+..++.+..+ +++.|+++...|. ++...+...|+ +++.++.. |+
T Consensus 64 ~~v~~ssG~~Ai~~~l~all~--------------~Gd~Vv~~~~~y~~t~~~~~~l~~~G~---~v~~v~~~-----d~ 121 (397)
T PRK05939 64 GTVCFATGMAAIAAVFLTLLR--------------AGDHLVSSQFLFGNTNSLFGTLRGLGV---EVTMVDAT-----DV 121 (397)
T ss_pred eEEEeCCHHHHHHHHHHHHcC--------------CCCEEEECCCccccHHHHHHHHHhcCC---EEEEECCC-----CH
Confidence 457788888888777765433 6677888877664 44455666677 68788763 89
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
+++++++++ ++++|++++++|++|.+.|+++|+++||++|++++||++|+.+... +.. .. ++|+++.
T Consensus 122 e~l~~~l~~------~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~~-~~~-----~~-gaDivv~ 188 (397)
T PRK05939 122 QNVAAAIRP------NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWLF-RPK-----DV-GASLVIN 188 (397)
T ss_pred HHHHHhCCC------CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccccc-Ccc-----cc-CCEEEEe
Confidence 999999854 5889999999999999999999999999999999999999766432 111 11 4899999
Q ss_pred CCccccCCCCc
Q psy14299 161 NPHKMLGAPLQ 171 (448)
Q Consensus 161 s~hK~l~~P~g 171 (448)
|+||+++++..
T Consensus 189 S~sK~~~g~g~ 199 (397)
T PRK05939 189 SLSKYIAGHGN 199 (397)
T ss_pred cCeecccCCCC
Confidence 99999998654
No 241
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.58 E-value=2.5e-13 Score=133.17 Aligned_cols=287 Identities=16% Similarity=0.151 Sum_probs=185.5
Q ss_pred eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCch---HHHHHHHHhCCCCCcEEEEecC-CCCCcCHHHH
Q psy14299 8 LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHY---SMLKAAHWLGIGMDNVIRVKTN-ERGQMICSFL 83 (448)
Q Consensus 8 t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~---s~~~~~~~~g~~~~~v~~v~~~-~~g~id~e~L 83 (448)
-.+|+.||+.+..+..+ |++.|+.-+..|- +--......|.- -++...+++ +++.||+|++
T Consensus 94 PhSGs~AN~av~~All~--------------pGDtimgm~l~~GGHltHg~~v~~sG~~-~~~v~Y~vd~et~~IDyD~~ 158 (413)
T COG0112 94 PHSGSQANQAVYLALLQ--------------PGDTIMGLDLSHGGHLTHGSPVNFSGKL-FNVVSYGVDPETGLIDYDEV 158 (413)
T ss_pred CCCchHHHHHHHHHHcC--------------CCCeEecccCCCCCcccCCCCCCcccee-EEeEecccccccCccCHHHH
Confidence 36899999988887666 5566665444442 211112222321 146666777 4599999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++...+ .+|++|++-. +..--..|++++.++|++.|++|.+|.||-+|......++. .+..+|+++.+.|
T Consensus 159 ~k~a~e-----~kPK~ii~G~--SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~---P~~~AdvVTtTTH 228 (413)
T COG0112 159 EKLAKE-----VKPKLIIAGG--SAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPN---PLPHADVVTTTTH 228 (413)
T ss_pred HHHHHH-----hCCCEEEECc--cccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCC---CCCccceEeCCcc
Confidence 999987 3788887643 44567789999999999999999999999988775544432 3446999999999
Q ss_pred cccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhh
Q psy14299 164 KMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAV 243 (448)
Q Consensus 164 K~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~ 243 (448)
|+|.+|.| |++++++.++.....+..-+- .+++.....
T Consensus 229 KTlrGPrG-G~Il~~~eel~kkin~aVFPg------------------~qggpl~Hv----------------------- 266 (413)
T COG0112 229 KTLRGPRG-GIILTNDEELAKKINSAVFPG------------------LQGGPLMHV----------------------- 266 (413)
T ss_pred cCCCCCCc-eEEEeccHHHHHHhhhhcCCc------------------cCCChHHHH-----------------------
Confidence 99999985 455565544444332211110 111111000
Q ss_pred hhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHHH
Q psy14299 244 DCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 323 (448)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 323 (448)
+.+.++++......+|++..++.
T Consensus 267 ---------------------------------------------------------iAakaVa~~Eal~p~fk~Ya~qV 289 (413)
T COG0112 267 ---------------------------------------------------------IAAKAVAFKEALEPEFKEYAKQV 289 (413)
T ss_pred ---------------------------------------------------------HHHHHHHHHHHcChhHHHHHHHH
Confidence 22334566666777899999999
Q ss_pred HHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee----ecC
Q psy14299 324 VDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ----PLQ 399 (448)
Q Consensus 324 ~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~----~~~ 399 (448)
.++++.+.+.|.+. |+++++.--+...+.+.+.+.+++++ ..-+.|.+.| +.+.-. ...
T Consensus 290 v~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~~~~~Gk---------------~ae~~L~~~~-It~NKN~iP~D~~ 352 (413)
T COG0112 290 VKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRSKGLTGK---------------KAEAALERAG-ITVNKNAIPFDPE 352 (413)
T ss_pred HHHHHHHHHHHHHc-CCeEecCCccceEEEEEcccCCCCHH---------------HHHHHHHHcC-EeeccCCCCCCCC
Confidence 99999999999997 99998434456777776665554432 3444455556 544321 111
Q ss_pred CcccccEEEEEecC--CCCCCHHHHHHHHHHHHHHHHH
Q psy14299 400 HRNLHNFFRLVTTC--HPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 400 g~~~~~~lRis~~~--~~~~t~edid~l~~al~~~~~~ 435 (448)
....+..||++.-. .-...++|++++.+.|.++...
T Consensus 353 ~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 353 SPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred CCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 11223679998720 1223467888888888877654
No 242
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.58 E-value=8.4e-13 Score=134.90 Aligned_cols=150 Identities=9% Similarity=-0.011 Sum_probs=106.6
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC--CCcCHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER--GQMICSF 82 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~--g~id~e~ 82 (448)
.++|+|+++++.+++.+... +++.|+++...+..+...++..|. +++.+|.+++ ..+|+++
T Consensus 95 I~it~Gs~~al~~~~~~l~~--------------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~ 157 (388)
T PRK07366 95 VLPLIGSQEGTAHLPLAVLN--------------PGDFALLLDPGYPSHAGGVYLAGG---QIYPMPLRAENDFLPVFAD 157 (388)
T ss_pred EEECCCcHHHHHHHHHHhCC--------------CCCEEEEcCCCCcchHHHHHhcCC---EEEEEECCCccCCCCCHHH
Confidence 67789999998777665444 567788899999999999999998 7889998753 4678888
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCC-cc--
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINR-AN-- 156 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~-aD-- 156 (448)
+++.+.+ ++++++++.++|+||.+.+ +++|.++|++||+++++|.+|.-...........+..+.. -+
T Consensus 158 l~~~~~~------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~v 231 (388)
T PRK07366 158 IPTEVLA------QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVS 231 (388)
T ss_pred HHHhhcc------cceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccE
Confidence 8777643 4788999999999998866 5667789999999999999987554311100011111111 12
Q ss_pred EEEECCccccCCC-CceEEEEE
Q psy14299 157 SVSWNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 157 ~~~~s~hK~l~~P-~g~G~l~v 177 (448)
+++.|+.|.++.| .-+|+++.
T Consensus 232 i~~~SfSK~~g~~GlRiG~~v~ 253 (388)
T PRK07366 232 IEFFTLSKSYNMGGFRIGFAIG 253 (388)
T ss_pred EEEeecccccCCcchhheehcC
Confidence 4557889988655 34555543
No 243
>PRK06855 aminotransferase; Validated
Probab=99.58 E-value=1.3e-12 Score=135.55 Aligned_cols=152 Identities=14% Similarity=0.068 Sum_probs=103.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH-HhCCCCCcEEEEecCC--CCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH-WLGIGMDNVIRVKTNE--RGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~-~~g~~~~~v~~v~~~~--~g~id~ 80 (448)
..++|+|+++++..++. ... +++.|++.+.+++.+..... ..|. +++.+|.++ ++.+|+
T Consensus 98 ~I~it~G~~~al~~~~~-l~~--------------~Gd~Vlv~~P~Y~~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~ 159 (433)
T PRK06855 98 DIIFFNGLGDAIAKIYG-LLR--------------REARVIGPSPAYSTHSSAEAAHAGY---PPVTYRLDPENNWYPDL 159 (433)
T ss_pred HEEEcCcHHHHHHHHHH-hcC--------------CCCeEEEeCCCCchHHHHHHHhcCC---eEEEEecccccCCCCCH
Confidence 36789999999777653 322 56778888888877554322 3465 677788764 357899
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCC-cc
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINR-AN 156 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~-aD 156 (448)
++|+++++. +.++++++++.++|+||.+.+ +++|.++|++||++++.|.+|+-..+..........-... --
T Consensus 160 ~~l~~~~~~----~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~ 235 (433)
T PRK06855 160 DDLENKVKY----NPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPG 235 (433)
T ss_pred HHHHHHHhc----CCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCe
Confidence 999999863 124678888899999998877 5677888999999999999988554321111110000011 12
Q ss_pred EEEECCccccCCC-CceEEEEE
Q psy14299 157 SVSWNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 157 ~~~~s~hK~l~~P-~g~G~l~v 177 (448)
+++.|+.|.++.| .-+|++++
T Consensus 236 I~~~S~SK~~~~pGlRiG~ii~ 257 (433)
T PRK06855 236 IALKGISKELPWPGSRCGWIEV 257 (433)
T ss_pred EEEecCccccCCCcceEEEEEE
Confidence 6678899998755 34777665
No 244
>PRK03321 putative aminotransferase; Provisional
Probab=99.57 E-value=4.5e-13 Score=135.03 Aligned_cols=155 Identities=10% Similarity=-0.015 Sum_probs=108.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++..++..... +++.|+++...+..+...++..|. +++.++.++++.+|++++
T Consensus 76 ~I~~~~G~~~~l~~~~~~~~~--------------~gd~Vli~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~l 138 (352)
T PRK03321 76 HVAVGCGSVALCQQLVQATAG--------------PGDEVIFAWRSFEAYPILVQVAGA---TPVQVPLTPDHTHDLDAM 138 (352)
T ss_pred HEEECCCHHHHHHHHHHHhcC--------------CCCEEEeCCCCHHHHHHHHHHcCC---EEEEccCCCCCCCCHHHH
Confidence 467888888876666544322 567788887776667777788888 788999877788999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHH--cCCEEEEecccccccccccchh--hhhcCCCCcc-EE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEK--YDLWMHVDACWGGSLIFSEKYS--FVLKGINRAN-SV 158 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~--~g~~l~VD~A~~~~~~~~~~~~--~~~~~~~~aD-~~ 158 (448)
++.+++ ++++|++++++|++|.+.|.++|.++|++ +++++++|++|........... ..... .-+ ++
T Consensus 139 ~~~~~~------~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~~~vi~ 210 (352)
T PRK03321 139 AAAITD------RTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRD--HPNVVV 210 (352)
T ss_pred HHhhcc------CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhh--CCCEEE
Confidence 998854 47789999999999999999999999987 5999999999875433111000 00111 112 44
Q ss_pred EECCccccCCCC-ceEEEEEeccchhh
Q psy14299 159 SWNPHKMLGAPL-QCSILLIKEKGLLH 184 (448)
Q Consensus 159 ~~s~hK~l~~P~-g~G~l~vr~~~~~~ 184 (448)
+.|+.|.++.|. -+|+++.. +++..
T Consensus 211 ~~S~SK~~g~~GlRiG~~v~~-~~~~~ 236 (352)
T PRK03321 211 LRTFSKAYGLAGLRVGYAVGH-PEVIA 236 (352)
T ss_pred EecchHHhhhHHHhhhhhcCC-HHHHH
Confidence 557899887442 36776653 34433
No 245
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.57 E-value=1.1e-13 Score=142.81 Aligned_cols=152 Identities=19% Similarity=0.216 Sum_probs=120.8
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC------CCcC
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER------GQMI 79 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~------g~id 79 (448)
+.++|.|.||...+++... +++.|+++++.|.|+..+.-+.|. ..+++....+ +.|+
T Consensus 90 FvvNGTS~ank~vi~a~~~--------------~GD~VLvdRN~HKSi~~glilaGa---~Pvyl~p~~np~~gi~ggI~ 152 (557)
T COG1982 90 FVVNGTSTANKAVINAVLT--------------PGDKVLVDRNCHKSIHHGLILAGA---TPVYLEPSRNPLYGIIGGIP 152 (557)
T ss_pred EEECCccHHHHHHHHhhcC--------------CCCEEEecCCccHHHHHHHHHcCC---ceEEecCCCCccccccCCCC
Confidence 4555556777777666554 788999999999999999999998 4445544322 5899
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
.+.+++++.+.... -++++++.+++ .|+..++++|.+.++++++|+.+|.+|+...-..+...... ....+|+++
T Consensus 153 ~~~~~~~l~~~~~~---~k~~vitnpTY-dGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~-~~~~~~~~t 227 (557)
T COG1982 153 LETFKEALLAHPDA---EKLAVITNPTY-DGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESA-LNGGADFVT 227 (557)
T ss_pred HHHHHHHHHhChhh---heeEEEecCcc-ceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchh-hhcCceEEE
Confidence 99999999764221 17888888877 99999999999999999999999999999877665544311 113689999
Q ss_pred ECCccccCCCCceEEEEEec
Q psy14299 160 WNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~ 179 (448)
.|.||.+++-..++.+.+++
T Consensus 228 qS~HK~l~alSQaS~iHv~~ 247 (557)
T COG1982 228 QSTHKLLAALSQASMIHVKD 247 (557)
T ss_pred echhhhhhhhhhhHHHhhCC
Confidence 99999999999999999987
No 246
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.56 E-value=9.8e-13 Score=132.94 Aligned_cols=145 Identities=12% Similarity=-0.003 Sum_probs=95.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++..++...... +++.|++++..|..+...++..|. +++.++ |++.+
T Consensus 82 ~I~it~G~~~~i~~~~~~l~~~-------------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~-------~~~~l 138 (357)
T TIGR03539 82 AVLPVIGTKELVAWLPTLLGLG-------------PGDTVVIPELAYPTYEVGALLAGA---TPVAAD-------DPTEL 138 (357)
T ss_pred eEEEccChHHHHHHHHHHHcCC-------------CCCEEEECCCCcHHHHHHHHhcCC---EEeccC-------Chhhc
Confidence 4678899999877665443222 677899999999999988888887 555543 33332
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhc-----CCCCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK-----GINRA 155 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~-----~~~~a 155 (448)
+ + .++++|+++.++|+||...+ +++|.++|++||+++++|.+|......-+... ... +...-
T Consensus 139 ~----~-----~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~~~~~ 208 (357)
T TIGR03539 139 D----P-----VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVS-ILDPRVCGGDHTG 208 (357)
T ss_pred C----c-----cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCcc-ceecccCCCcccc
Confidence 2 1 25789999999999998765 67799999999999999999864322100000 000 00001
Q ss_pred cEEEECCccccCCCCc-eEEEEEeccch
Q psy14299 156 NSVSWNPHKMLGAPLQ-CSILLIKEKGL 182 (448)
Q Consensus 156 D~~~~s~hK~l~~P~g-~G~l~vr~~~~ 182 (448)
-+++.|+.|.++.|.- +|.++. ++++
T Consensus 209 vi~~~S~SK~~~~~G~R~G~~i~-~~~~ 235 (357)
T TIGR03539 209 LLAVHSLSKRSNLAGYRAGFVAG-DPAL 235 (357)
T ss_pred EEEEeccccccCCCceeEEEEec-CHHH
Confidence 2666799998866543 455553 4443
No 247
>PRK04311 selenocysteine synthase; Provisional
Probab=99.56 E-value=2.9e-12 Score=133.03 Aligned_cols=149 Identities=15% Similarity=0.152 Sum_probs=106.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH------HHHHHHHhCCCCCcEEEEecCCCCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS------MLKAAHWLGIGMDNVIRVKTNERGQ 77 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s------~~~~~~~~g~~~~~v~~v~~~~~g~ 77 (448)
.++++++|+.|+.+++.. .. +++.|++++.+|++ +...++..|+ +++.++.+ ..
T Consensus 144 ~a~vv~sgtaAl~l~l~~-l~--------------~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~---~l~~v~~~--~~ 203 (464)
T PRK04311 144 DALVVNNNAAAVLLALNA-LA--------------AGKEVIVSRGELVEIGGAFRIPDVMRQAGA---RLVEVGTT--NR 203 (464)
T ss_pred eEEEECCHHHHHHHHHHH-hC--------------CCCEEEEcchhhhhcCcchhhHHHHHHCCc---EEEEECCC--CC
Confidence 478899999998877643 22 55678889887773 2344556677 67777653 34
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCCc--cc--cccCHHHHHHHHHHcCCEEEEeccccccc----ccccchhhhh
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTTV--LG--AFDPLDEIATVCEKYDLWMHVDACWGGSL----IFSEKYSFVL 149 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~--tG--~~~~l~~I~~ia~~~g~~l~VD~A~~~~~----~~~~~~~~~~ 149 (448)
.++++++++|.+ ++++|+++|.+|+ +| ...|+++|+++||+||+++++|+++|... +.....+ .+
T Consensus 204 t~~~dle~aI~~------~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p-~~ 276 (464)
T PRK04311 204 THLRDYEQAINE------NTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEP-TV 276 (464)
T ss_pred CCHHHHHHhcCc------cCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCC-ch
Confidence 689999999965 4889999999886 45 56899999999999999999999654321 1000001 11
Q ss_pred cC-C-CCccEEEECCccccCCCCceEEEEEecc
Q psy14299 150 KG-I-NRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 150 ~~-~-~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
.. + .++|++++|+|||+++| ++|+++.+++
T Consensus 277 ~~~l~~GaDiv~fSg~K~LgGp-~~G~i~g~~~ 308 (464)
T PRK04311 277 QELLAAGVDLVTFSGDKLLGGP-QAGIIVGKKE 308 (464)
T ss_pred hhHHhcCCcEEEecCcccccCC-ceEEEEEcHH
Confidence 10 1 25899999999999999 4888887653
No 248
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.56 E-value=5.2e-12 Score=129.97 Aligned_cols=134 Identities=11% Similarity=0.078 Sum_probs=106.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH----HHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA----AHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~----~~~~g~~~~~v~~v~~~~~g~id 79 (448)
.++.+++|+.|+.+++.++.. +++.|+++...+.+.... ....|+ ++..+.. .+|
T Consensus 78 ~av~~~SG~aAi~~al~all~--------------~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi---~v~~vd~----~~d 136 (432)
T PRK06702 78 GAVATASGQAAIMLAVLNICS--------------SGDHLLCSSTVYGGTFNLFGVSLRKLGI---DVTFFNP----NLT 136 (432)
T ss_pred cEEEECCHHHHHHHHHHHhcC--------------CCCEEEECCCchHHHHHHHHHHHHHCCC---EEEEECC----CCC
Confidence 578999999999998876543 677899998888755554 456677 6666643 479
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+++++++|++ ++++|++.++.|+++.+.|+++|+++||+||+++++|.+++..... .... -+||+++
T Consensus 137 ~~~l~~~I~~------~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~~-~pl~------~GADIvv 203 (432)
T PRK06702 137 ADEIVALAND------KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYLC-QAFE------HGANIIV 203 (432)
T ss_pred HHHHHHhCCc------CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhhC-Chhh------cCCCEEE
Confidence 9999999965 5889999999999999999999999999999999999998643321 1111 1589999
Q ss_pred ECCccccCCCCc
Q psy14299 160 WNPHKMLGAPLQ 171 (448)
Q Consensus 160 ~s~hK~l~~P~g 171 (448)
.|..|+++++.+
T Consensus 204 ~S~TKy~~Ghsd 215 (432)
T PRK06702 204 HSTTKYIDGHAS 215 (432)
T ss_pred EccccccCCCcc
Confidence 999999988744
No 249
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.56 E-value=3.3e-13 Score=135.20 Aligned_cols=215 Identities=15% Similarity=0.051 Sum_probs=149.0
Q ss_pred CcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCccccCCCCceEEE
Q psy14299 96 IPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSIL 175 (448)
Q Consensus 96 ~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l 175 (448)
....|.+++.+|.+|+..| ++.+.++++++||+..+.+..+++.. ..|.+..+.+|+++ |+|.+++
T Consensus 143 d~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~--------~~dvi~agsQKnlg-P~Gltvv 208 (364)
T PRK12462 143 RAPFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVE--------AYGMVYAHAQKNLG-PAGVTVA 208 (364)
T ss_pred CCcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChH--------HccEEEeeccccCC-CCceEEE
Confidence 3568999999999999987 44445799999999988887766532 23899999999998 9999999
Q ss_pred EEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhhhhccCCCccchh
Q psy14299 176 LIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTL 255 (448)
Q Consensus 176 ~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~ 255 (448)
++|++. +.......+.|+. ++..+++
T Consensus 209 ivs~~a-l~~~~~~~p~~ld---------------------------------------y~~~~~~-------------- 234 (364)
T PRK12462 209 IIRRAL-LERVPDTLPPMLD---------------------------------------FRTHVEH-------------- 234 (364)
T ss_pred EECHHH-HhhccccCCchhh---------------------------------------HHHHHhc--------------
Confidence 998875 3332221222221 0010000
Q ss_pred hhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc--cHHHHHHHHHHHHHHHHHH
Q psy14299 256 LCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL--GFRHFVDNAVDCSRYFLSQ 333 (448)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--G~~~~~~~~~~l~~~~~~~ 333 (448)
.....=++...+..+..+++++.++ |++.+.++..++++.+++.
T Consensus 235 ----------------------------------~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~ 280 (364)
T PRK12462 235 ----------------------------------RSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYAT 280 (364)
T ss_pred ----------------------------------CCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 0000112245566777889998777 9999999999999999999
Q ss_pred hhcCCCeEEeccCC---ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcccccEEEEE
Q psy14299 334 ISQRPGFRLVIPEF---QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLV 410 (448)
Q Consensus 334 L~~~pg~~l~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis 410 (448)
|.+.++|......+ ...+++|++..+. ...+|.+...++|.+.+.+ ++. -+.+|+|
T Consensus 281 id~~~~~~~~~~~~~~RS~mnv~f~~~~~~----------------l~~~f~~~a~~~gl~~lkG--hr~---vgg~Ras 339 (364)
T PRK12462 281 LDALNEVIDCHAHRAARSTMNVAFRFRQPR----------------LDTLFKEQSTEAGFCGLSG--HRS---IGGIRAS 339 (364)
T ss_pred HHhCCCcccCCCChhhcCcceEEEEcCCHH----------------HHHHHHHHHHHCCCccccC--Ccc---cCceEEE
Confidence 99998775431112 2456677643211 2357888889999543322 222 2569999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 411 TTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 411 ~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
+ ....+.|+++.|++-+++..++
T Consensus 340 ~--yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 340 L--YNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred c--CCCCCHHHHHHHHHHHHHHHHh
Confidence 9 5678899999999999988764
No 250
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.56 E-value=8.1e-13 Score=134.49 Aligned_cols=162 Identities=12% Similarity=0.099 Sum_probs=108.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH-HHHhCCCCCcEEEEec----------
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA-AHWLGIGMDNVIRVKT---------- 72 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~-~~~~g~~~~~v~~v~~---------- 72 (448)
.+++|++||+|..++..+.. .|++.| +...|..-..+ ..+.|. .+.-++.
T Consensus 88 ~av~v~sGT~Al~ll~~l~l--------------~pGDeV--psn~~f~Tt~ahIe~~Ga---v~vDi~~dea~~~~~~~ 148 (450)
T TIGR02618 88 YVVPTHQGRGAENLLSQIAI--------------KPGDYV--PGNMYFTTTRYHQEKNGA---TFVDIIIDEAHDAQLNI 148 (450)
T ss_pred eEEEcCCHHHHHHHHHHhCC--------------CCcCEE--CCceeHHHHHHHHHhCCe---EEEeeecccccccccCC
Confidence 47899999999554322211 256655 66888776666 566776 4555543
Q ss_pred CCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcc-ccc---cCHHHHHHHHHHcCCEEEEecccccc-cccccchhh
Q psy14299 73 NERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVL-GAF---DPLDEIATVCEKYDLWMHVDACWGGS-LIFSEKYSF 147 (448)
Q Consensus 73 ~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~t-G~~---~~l~~I~~ia~~~g~~l~VD~A~~~~-~~~~~~~~~ 147 (448)
+.+|.+|+++|+++|++.. ..++++|.++...+.. |.. .++++|.++|++||+++|.|+|+..+ ++++.....
T Consensus 149 p~~GniD~~~Le~aI~~~~--~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~ 226 (450)
T TIGR02618 149 PFKGNVDLKKLQKLIDEVG--ADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQ 226 (450)
T ss_pred CCCCCcCHHHHHHHhcccc--CcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccc
Confidence 2468999999999997521 1123455555555544 655 67899999999999999999999883 443211000
Q ss_pred -----hh----c-CCCCccEEEECCccccCCCCceEEEEEeccchhhhhc
Q psy14299 148 -----VL----K-GINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQAN 187 (448)
Q Consensus 148 -----~~----~-~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~ 187 (448)
.+ . -.+.+|++++|+||-.++|.| |++..+++++..+..
T Consensus 227 g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G-G~l~~~d~~l~~k~r 275 (450)
T TIGR02618 227 GYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG-GFLCMNDDEMFQSAK 275 (450)
T ss_pred cccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc-eEEEeCCHHHHHHHH
Confidence 01 1 123589999999999999983 555567877666543
No 251
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.55 E-value=2.8e-12 Score=131.50 Aligned_cols=158 Identities=16% Similarity=0.140 Sum_probs=101.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
.++|+++||+||..|+..+|.... ++.| + .+..+|..+...|-+...+....+.. ...+..+|.+
T Consensus 94 ~~~f~~SGseA~e~Alk~ar~~~~---~~~~-~-~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 167 (397)
T TIGR03246 94 KVFFCNSGAEANEAALKLARRYAL---DKHG-A-DKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN- 167 (397)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHH---hcCC-C-CCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCC-
Confidence 579999999999999999876421 0011 1 14456777778888877665554421 0123344443
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc----cCHHHHHHHHHHcCCEEEEecccccccccccchhhhhc
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF----DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~----~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
|++++++.+.+ ++.+|++....++.|.+ .++++|.++|++||+++++|++|.+.-.....+.....
T Consensus 168 ----d~~~l~~~l~~------~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~ 237 (397)
T TIGR03246 168 ----DLAAAKALISD------KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHY 237 (397)
T ss_pred ----CHHHHHHHhcc------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhc
Confidence 89999998853 47788888777767744 44999999999999999999998432111110111111
Q ss_pred CCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 151 GINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
++ ..|+++ ..|.+++-...|.+..+++
T Consensus 238 gv-~pDi~t--~~K~lggG~pigav~~~~~ 264 (397)
T TIGR03246 238 GV-TPDILT--SAKALGGGFPIGAMLTTTE 264 (397)
T ss_pred CC-CCCEEE--eehhhhCCcceeEEEEcHH
Confidence 33 367765 5788854345677666543
No 252
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.55 E-value=1.7e-12 Score=133.94 Aligned_cols=142 Identities=15% Similarity=0.088 Sum_probs=109.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHH----HHHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSM----LKAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~----~~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++|++++..++.+... +++.|+++...|... ...+...|+ +++.++.+ |
T Consensus 74 ~~v~~~sG~~Ai~~al~~l~~--------------~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~---~v~~v~~~-----d 131 (418)
T TIGR01326 74 AALAVASGQAAITYAILNLAQ--------------AGDNIVSSSYLYGGTYNLFKHTLKRLGI---EVRFVDPD-----D 131 (418)
T ss_pred eEEEEccHHHHHHHHHHHHhC--------------CCCEEEEECCCcHHHHHHHHHHHHHcCc---EEEEECCC-----C
Confidence 578999999999888876654 456677787776543 344556677 67777753 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++.+++|++|.+.|+++|.++||++|++++||++++.+....+ . . .++|+++
T Consensus 132 ~~~l~~~l~~------~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~~~-l-----~-~g~Divv 198 (418)
T TIGR01326 132 PEEFEKAIDE------NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLCRP-I-----D-HGADIVV 198 (418)
T ss_pred HHHHHHhcCc------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcCCc-h-----h-cCCeEEE
Confidence 9999998854 478999999999999999999999999999999999999986633211 1 1 1479999
Q ss_pred ECCccccCCCCc-eEEEEEecc
Q psy14299 160 WNPHKMLGAPLQ-CSILLIKEK 180 (448)
Q Consensus 160 ~s~hK~l~~P~g-~G~l~vr~~ 180 (448)
.|++|+++++.. .|.++++.+
T Consensus 199 ~S~sK~l~g~G~~lGg~v~~~~ 220 (418)
T TIGR01326 199 HSATKYIGGHGTAIGGVIVDGG 220 (418)
T ss_pred ECccccccCCccceEEEEEecc
Confidence 999999987643 566666543
No 253
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.55 E-value=2.6e-12 Score=129.30 Aligned_cols=273 Identities=14% Similarity=0.081 Sum_probs=179.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.++.++|+++.+...+.+.+. +++.|+++..+...+...++..|. +++.++..+ +.+|++.+
T Consensus 77 ~V~~gnGsde~i~~l~~~~~~--------------~gd~vl~~~Ptf~~Y~~~a~~~g~---~~~~v~~~~-~~~d~~~~ 138 (356)
T COG0079 77 NVLVGNGSDELIELLVRAFVE--------------PGDTVLIPEPTFSMYEIAAQLAGA---EVVKVPLKE-FRLDLDAI 138 (356)
T ss_pred eEEEcCChHHHHHHHHHHhhc--------------CCCEEEEcCCChHHHHHHHHhcCC---eEEEecccc-cccCHHHH
Confidence 345578888887777766655 556788898999999999999999 899999987 99999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc--CCEEEEecccccccccccchhhhhcCCCCcc-EEEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY--DLWMHVDACWGGSLIFSEKYSFVLKGINRAN-SVSW 160 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~--g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD-~~~~ 160 (448)
...+.+ ++++|+++.++|+||...+.++|.+++... +.+++||+||.=..- +.....+. ..-+ ++.=
T Consensus 139 ~~~~~~------~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~--~~~~~l~~--~~~nlivlR 208 (356)
T COG0079 139 LAAIRD------KTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSP--ESSLELLK--YPPNLIVLR 208 (356)
T ss_pred HHhhhc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCC--chhhhhcc--CCCCEEEEE
Confidence 999875 478999999999999999888888888754 789999999874433 11111111 0112 4445
Q ss_pred CCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 161 NPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 161 s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
++.|.++-+ .=+|+ .+.++++........++|-.+ .....++..+
T Consensus 209 TfSKa~gLAGlRlGy-~ia~~~~i~~l~~vr~p~~v~-----------------------~~a~~aa~aa---------- 254 (356)
T COG0079 209 TFSKAFGLAGLRVGY-AIANPELIAALNKVRPPFNVS-----------------------SPALAAAIAA---------- 254 (356)
T ss_pred ecHHhhhcchhceee-ccCCHHHHHHHHHhcCCCCCC-----------------------HHHHHHHHHH----------
Confidence 888876654 23455 344555554443333333110 0000001110
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 319 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 319 (448)
++.. +-+++.
T Consensus 255 --------------------------------------------------------------------l~~~--~~~~~~ 264 (356)
T COG0079 255 --------------------------------------------------------------------LRDA--DYLEES 264 (356)
T ss_pred --------------------------------------------------------------------cccH--HHHHHH
Confidence 1110 234456
Q ss_pred HHHHHHHHHHHHHHhhcCCCeE-EeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeec
Q psy14299 320 VDNAVDCSRYFLSQISQRPGFR-LVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPL 398 (448)
Q Consensus 320 ~~~~~~l~~~~~~~L~~~pg~~-l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~ 398 (448)
.+.....++++.+.|++++ +. ++ +...+.+.++... .. ...+.+.|.++|++ +....-
T Consensus 265 ~~~~~~~r~rl~~~l~~~~-~~~v~--pS~aNFvlv~~~~----------------~~-~~~l~~~L~~~gii-vR~~~~ 323 (356)
T COG0079 265 VERIREERERLYAALKALG-LFGVF--PSQANFVLVRVPD----------------AE-AAALAEALLKKGIL-VRDCSS 323 (356)
T ss_pred HHHHHHHHHHHHHHHHhCC-CCeec--CCCCcEEEEECCC----------------cc-HHHHHHHHHHCCEE-EEeCCC
Confidence 6677778999999999995 55 54 4455555554321 01 23688999999944 443321
Q ss_pred CCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 399 QHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 399 ~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
.+ ..++++|+++. |+|+.++++++|+++.+.
T Consensus 324 ~~-~~~~~lRitvg-----t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 324 VG-LLPGYLRITVG-----TPEENDRLLAALREVLKG 354 (356)
T ss_pred CC-CCCCeEEEEeC-----CHHHHHHHHHHHHHHHhc
Confidence 22 12469999996 788889999999988754
No 254
>PLN02624 ornithine-delta-aminotransferase
Probab=99.55 E-value=1.1e-11 Score=129.88 Aligned_cols=162 Identities=17% Similarity=0.128 Sum_probs=100.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
..+|+++|++||-.|+..+|.... ...|.+.....+|.....-|-...-+..+.+-. ...+..+|.+
T Consensus 134 ~~~f~~SGseA~e~AlklAr~~~~---~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~- 209 (474)
T PLN02624 134 MVLPMNTGAEGVETAIKLARKWGY---EKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFG- 209 (474)
T ss_pred eEEEeCChHHHHHHHHHHHHHHHH---hhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCC-
Confidence 478999999999999998886411 111221111223444444454333333322210 0113344433
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccchhhhhc
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
|++.+++.++. .+.++.+|++..+.+++|.+.| +++|.++|++||+++++|++|.+.-.....+.....
T Consensus 210 ----d~~~l~~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~ 282 (474)
T PLN02624 210 ----DLDALEKIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWE 282 (474)
T ss_pred ----CHHHHHHHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhc
Confidence 78999998864 2345778999999999999888 999999999999999999998742111111111112
Q ss_pred CCCCccEEEECCccccCCC-CceEEEEEec
Q psy14299 151 GINRANSVSWNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~ 179 (448)
++ ..|++++ .|.+++. ..+|.++.++
T Consensus 283 ~i-~pDiv~l--sK~lggG~~pigav~~~~ 309 (474)
T PLN02624 283 EV-RPDVVIL--GKALGGGVIPVSAVLADK 309 (474)
T ss_pred CC-CCCEEEe--cccccCCCCcceeeeecH
Confidence 33 3688887 4988766 4577776644
No 255
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.55 E-value=1.8e-12 Score=132.07 Aligned_cols=131 Identities=14% Similarity=0.138 Sum_probs=102.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH----HHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA----AHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~----~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++|+.|+..++.+..+ +++.|++++..+.++... ++..|+ ++..++.+ +
T Consensus 81 ~~v~~sSG~aAi~~~l~all~--------------~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi---~v~~vd~~-----~ 138 (395)
T PRK05967 81 GTILVPSGLAAVTVPFLGFLS--------------PGDHALIVDSVYYPTRHFCDTMLKRLGV---EVEYYDPE-----I 138 (395)
T ss_pred CEEEECcHHHHHHHHHHHhcC--------------CCCEEEEccCCcHHHHHHHHHHHHhcCe---EEEEeCCC-----C
Confidence 468888899888877765533 678899998888887643 455566 67777543 4
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
.+.+++++++ ++++|.+++++|+++.+.||++|+++||++|++++||.+++.....-+ .. + ++|+++
T Consensus 139 ~e~l~~al~~------~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~p-l~-----~-GaDivv 205 (395)
T PRK05967 139 GAGIAKLMRP------NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYFRP-LD-----F-GVDISI 205 (395)
T ss_pred HHHHHHhcCc------CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceecCh-hH-----c-CCCEEE
Confidence 5778888854 589999999999999999999999999999999999999986543211 11 1 589999
Q ss_pred ECCccccCCC
Q psy14299 160 WNPHKMLGAP 169 (448)
Q Consensus 160 ~s~hK~l~~P 169 (448)
.|..|++++.
T Consensus 206 ~S~tKy~~Gh 215 (395)
T PRK05967 206 HAATKYPSGH 215 (395)
T ss_pred EecccccCCC
Confidence 9999997654
No 256
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.54 E-value=6.6e-12 Score=127.72 Aligned_cols=158 Identities=11% Similarity=-0.043 Sum_probs=108.8
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICSFL 83 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e~L 83 (448)
.++|+|+++++..++.+.... ++..|+++...+..+...++..|. +++.++.++ ++.+|+++|
T Consensus 94 I~it~Ga~~al~~~~~~~~~~-------------g~~~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~~d~~~l 157 (374)
T PRK02610 94 ISVGNGSDELIRSLLIATCLG-------------GEGSILVAEPTFSMYGILAQTLGI---PVVRVGRDPETFEIDLAAA 157 (374)
T ss_pred EEEcCChHHHHHHHHHHHcCC-------------CCCeEEEcCCChHHHHHHHHHcCC---EEEEecCCcccCCCCHHHH
Confidence 678999999987665544332 223688898999999999999998 788888765 478999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHH-HcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCE-KYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~-~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
++++++.. ..++++|+++.++|+||...+.+++.++++ .+++++++|.+|.-.... ... ..+.... --+++.|+
T Consensus 158 ~~~~~~~~--~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~-~~~-~~~~~~~-~~ivi~Sf 232 (374)
T PRK02610 158 QSAIEQTQ--NPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQT-TLV-GELAQHP-NWVILRTF 232 (374)
T ss_pred HHHHHhhc--CCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCcc-chH-HHHhcCC-CEEEEEec
Confidence 99986411 135889999999999999988777666653 248999999998743211 100 1111110 01556789
Q ss_pred ccccCCC-CceEEEEEeccchhh
Q psy14299 163 HKMLGAP-LQCSILLIKEKGLLH 184 (448)
Q Consensus 163 hK~l~~P-~g~G~l~vr~~~~~~ 184 (448)
.|.++.| .-+|+++. ++.+..
T Consensus 233 SK~~g~~GlRiG~~v~-~~~l~~ 254 (374)
T PRK02610 233 SKAFRLAAHRVGYAIG-HPELIA 254 (374)
T ss_pred chhccCcccceeeeec-CHHHHH
Confidence 9999655 44676655 444433
No 257
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.54 E-value=1.6e-12 Score=131.63 Aligned_cols=147 Identities=13% Similarity=0.038 Sum_probs=96.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++..++.+.... +++.|+++...|..+...++..|. ++..++ +++++
T Consensus 88 ~I~it~G~~~~i~~~~~~l~~~-------------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~-------~~~~l 144 (364)
T PRK07865 88 AVLPVIGSKELVAWLPTLLGLG-------------PGDVVVIPELAYPTYEVGARLAGA---TVVRAD-------SLTEL 144 (364)
T ss_pred cEEEccChHHHHHHHHHHHcCC-------------CCCEEEECCCCcccHHHHHHhcCC---EEEecC-------ChhhC
Confidence 4678888889876654443121 567899999999999999998888 566553 22333
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchh---hhhcC-CCCcc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYS---FVLKG-INRAN 156 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~---~~~~~-~~~aD 156 (448)
++ .++++|+++.++|+||.+.+ +++|.++|++||+++++|.+|+......+... ....+ ...--
T Consensus 145 ~~---------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (364)
T PRK07865 145 GP---------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGL 215 (364)
T ss_pred Cc---------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceE
Confidence 21 25789999999999997755 67888999999999999999885432111000 00000 00113
Q ss_pred EEEECCccccCCCC-ceEEEEEeccchh
Q psy14299 157 SVSWNPHKMLGAPL-QCSILLIKEKGLL 183 (448)
Q Consensus 157 ~~~~s~hK~l~~P~-g~G~l~vr~~~~~ 183 (448)
+++.|+.|.++.|. -+|+++. ++++.
T Consensus 216 i~~~S~SK~~~~~GlRiG~i~~-~~~~~ 242 (364)
T PRK07865 216 LAVHSLSKQSNLAGYRAGFVAG-DPALV 242 (364)
T ss_pred EEEeechhccCCCceeeEEEec-CHHHH
Confidence 77789999986553 3455443 44433
No 258
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.54 E-value=3.5e-12 Score=130.74 Aligned_cols=154 Identities=10% Similarity=0.021 Sum_probs=109.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC--CCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER--GQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~--g~id~e 81 (448)
..++|+|+++++..++.+..++ | .+++.|+++...+..+...++..|. +++.+|.+++ +.+|++
T Consensus 92 ~i~it~G~~~al~~~~~~l~~~--------~---~~gd~vlv~~P~y~~~~~~~~~~g~---~~~~vp~~~~~~~~~d~~ 157 (396)
T PRK09147 92 QVLPVNGSREALFAFAQTVIDR--------D---GPGPLVVCPNPFYQIYEGAALLAGA---EPYFLNCDPANNFAPDFD 157 (396)
T ss_pred eEEECCChHHHHHHHHHHHcCC--------C---CCCCEEEEcCCCccchHHHHHhcCC---EEEEeccCccccCccCHH
Confidence 4678899999987777665441 0 1267788898888888888998898 7889998643 579999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCcccccc---CHHHHHHHHHHcCCEEEEecccccccccccchh-hhh---cCCC-
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFD---PLDEIATVCEKYDLWMHVDACWGGSLIFSEKYS-FVL---KGIN- 153 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~---~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~-~~~---~~~~- 153 (448)
++++.+.+ ++++++++.++|+||.+. .+++|.++|++|++++++|.+|+-..+...... ... ....
T Consensus 158 ~l~~~~~~------~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 231 (396)
T PRK09147 158 AVPAEVWA------RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGR 231 (396)
T ss_pred HHHHHHhh------ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCc
Confidence 99988754 478999999999999886 477788899999999999999886543111000 000 0000
Q ss_pred -Ccc--EEEECCccccCCC-CceEEEEE
Q psy14299 154 -RAN--SVSWNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 154 -~aD--~~~~s~hK~l~~P-~g~G~l~v 177 (448)
..| +++.|+.|.++.| .-+|+++.
T Consensus 232 ~~~~~vi~~~S~SK~~~~~GlRiG~~~~ 259 (396)
T PRK09147 232 DDFKRLVVFHSLSKRSNVPGLRSGFVAG 259 (396)
T ss_pred cccccEEEEeccccccCCccceeeeecC
Confidence 011 6667899976555 45666554
No 259
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.54 E-value=3e-12 Score=130.17 Aligned_cols=160 Identities=18% Similarity=0.085 Sum_probs=92.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCC-CeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCc----
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLP-PLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQM---- 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~-~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~i---- 78 (448)
..++++||++++..++.+++.... ..| .+ +.+++.+...|.+...+....+.........+...+...
T Consensus 86 ~~~~~~sg~~a~~~a~~~~~~~~~----~~~---~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (379)
T TIGR00707 86 RVFFCNSGAEANEAALKLARKYTG----DKG---KEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYN 158 (379)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhh----ccC---CCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCC
Confidence 478999999999999887754210 001 02 334444445554444433322211000001111112111
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCcccccc----CHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCC
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFD----PLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINR 154 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~----~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~ 154 (448)
|++++++.+.+ ++++|+++.+.+++|... ++++|.++|++||+++++|++|...............++ .
T Consensus 159 d~~~l~~~~~~------~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~-~ 231 (379)
T TIGR00707 159 DIESLKKAIDD------ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGI-E 231 (379)
T ss_pred CHHHHHHHhhh------CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCC-C
Confidence 89999998864 477888888877777543 489999999999999999999873211111011111122 2
Q ss_pred ccEEEECCccccCCCCceEEEEEec
Q psy14299 155 ANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 155 aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
.|.++ ++|.+++...+|+++.++
T Consensus 232 ~d~~t--~sK~~~~G~riG~~~~~~ 254 (379)
T TIGR00707 232 PDIIT--LAKGLGGGVPIGATLAKE 254 (379)
T ss_pred CCEEE--EcccccCCcccEEEEEcH
Confidence 46554 589998656688877644
No 260
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.53 E-value=4.6e-12 Score=129.52 Aligned_cols=163 Identities=15% Similarity=-0.002 Sum_probs=97.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCC----CcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERG----QMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g----~id 79 (448)
.++|++|||+||..|+.+++.... ..|.+ ....+|..+...|-+...+....+.....-...|..++. ..|
T Consensus 90 ~v~~~~sGseA~~~al~~ar~~~~----~~G~~-~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 164 (389)
T PRK01278 90 KVFFTNSGAEAVECAIKTARRYHY----GKGHP-ERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGD 164 (389)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHH----hcCCC-CCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCC
Confidence 479999999999999998876411 11211 123455556666665555444333210000000111111 148
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccc----cCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCc
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF----DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRA 155 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~----~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~a 155 (448)
++++++.+++ ++++|+++...+++|.. .++++|.++|++||+++++|++|.+.............++ ..
T Consensus 165 ~~~l~~~l~~------~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~p 237 (389)
T PRK01278 165 IEALKAAITP------NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGV-TP 237 (389)
T ss_pred HHHHHHhhCC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCC-CC
Confidence 9999998853 57888888877777743 4799999999999999999999884321111001001122 24
Q ss_pred cEEEECCccccCCCCceEEEEEecc
Q psy14299 156 NSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 156 D~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
|.+ +..|.+++-...|.++.+++
T Consensus 238 di~--t~sK~l~~G~~ig~~~~~~~ 260 (389)
T PRK01278 238 DIM--AVAKGIGGGFPLGACLATEE 260 (389)
T ss_pred CEE--EEehhccCCcceEEEEEcHH
Confidence 655 45798874344777776553
No 261
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.53 E-value=1.3e-12 Score=129.45 Aligned_cols=199 Identities=14% Similarity=0.157 Sum_probs=133.8
Q ss_pred cEEEeCcHH-HHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC--CC-CCcC
Q psy14299 4 KPFLLPGGS-ISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN--ER-GQMI 79 (448)
Q Consensus 4 ~g~~t~ggT-~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~--~~-g~id 79 (448)
..+.+|-+| |+..+++.+.+.+ .....|+.++.+|+|-.+++...|+ +++.||.. ++ -..|
T Consensus 76 ~~~~vP~atgm~l~l~l~~l~~r------------~~a~~Viw~ridqkSc~kai~~AGl---~~~vV~~~~~~d~l~td 140 (389)
T PF05889_consen 76 SCFVVPMATGMSLTLCLLALRMR------------PKAKYVIWPRIDQKSCFKAIERAGL---EPVVVENVLEGDELITD 140 (389)
T ss_dssp EEEEESS-HHHHHHHHHHHHHHH------------CT--EEEEEEEETHHHHHHHHHTT----EEEEE-EEEETTEEEEH
T ss_pred ceEEEecccccHHHHHHHHHhcc------------cCCceEEEeeccccchHHHHHhcCC---eEEEeeccCCCCeeecc
Confidence 368889999 8888888888743 1345688899999999999999999 67777642 23 3668
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC-HHHHHHHHHHcCCEEEEecccccccccc-cchhhhhcCCCCccE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP-LDEIATVCEKYDLWMHVDACWGGSLIFS-EKYSFVLKGINRANS 157 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~-l~~I~~ia~~~g~~l~VD~A~~~~~~~~-~~~~~~~~~~~~aD~ 157 (448)
.+.+++.+++. +..+.++++++.+...+-..| +++|+++|++||++++|.+|||.-.-.. ..... ....+.+|.
T Consensus 141 ~~~ie~~i~~~---G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~-a~~~GRvda 216 (389)
T PF05889_consen 141 LEAIEAKIEEL---GADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQ-AWRVGRVDA 216 (389)
T ss_dssp HHHHHHHHHHH---CGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHH-HHHHSTCSE
T ss_pred HHHHHHHHHHh---CCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHH-HHhcCCcce
Confidence 89999999653 456789999999998997766 9999999999999999999999732211 00000 011235799
Q ss_pred EEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 158 VSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 158 ~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
++-+.-|.|..|.|-+.++..++..+.......|+-. .+...+-+...+..+|..|+..
T Consensus 217 ~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpGRa---------------------s~sp~ld~~itLl~LG~~g~~~ 275 (389)
T PF05889_consen 217 FVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPGRA---------------------SASPSLDLFITLLSLGCTGYGA 275 (389)
T ss_dssp EEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHSHB---------------------TSHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeecCCCEEecCCCcEEEecCHHHHHHHHHHhhhhh---------------------hcccchHHHHHHHHHhhhHHHH
Confidence 9999999999999999988877654443321111111 0112334555777788888888
Q ss_pred HHHHh
Q psy14299 238 FVDNA 242 (448)
Q Consensus 238 ~i~~~ 242 (448)
.+...
T Consensus 276 ll~~r 280 (389)
T PF05889_consen 276 LLKER 280 (389)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66553
No 262
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.53 E-value=3.8e-12 Score=133.63 Aligned_cols=338 Identities=12% Similarity=0.017 Sum_probs=191.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHh-cCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYR-LDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~-~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~ 80 (448)
..++|+|+++++..++.+.... +. .|++.|+++...+..+...+++.|.+. .++.++.++ ++.+|+
T Consensus 163 ~I~vT~Ga~~al~~~~~aL~~~~ll----------~pGD~Vlv~~P~y~~Y~~~~~l~g~~~-~~v~v~~~~~~~f~~d~ 231 (527)
T PRK09275 163 DLFAVEGGTAAMCYIFDSLKENGLL----------KAGDKIALMTPIFTPYLEIPELPRYDL-EVVHINADEENEWQYPD 231 (527)
T ss_pred eEEEeCCHHHHHHHHHHHHhhhhcC----------CCCCEEEEeCCChHHHHHHHHHcCCCe-EEEEeecCcccCCCCCH
Confidence 5889999999988887653221 11 377889999999999999999887643 355565442 478999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHH--cCCEEEEecccccccccccchhhhhcCCCCc
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEK--YDLWMHVDACWGGSLIFSEKYSFVLKGINRA 155 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~--~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~a 155 (448)
++|++++.+ ++++|+++.++|+||.+.+ +++|+++|++ ++++++.|.+|+-... ...........-
T Consensus 232 ~~l~~~~~~------~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s~~~~~~~~ 302 (527)
T PRK09275 232 SELEKLRDP------SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD---DFRSLFAVLPYN 302 (527)
T ss_pred HHHHhhcCC------CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc---cccCHHHhCCCC
Confidence 999987643 6889999999999998877 7778888965 5999999999885432 111111111111
Q ss_pred cEEEECCccccCCCC-ceEEEEEeccchhhhhccCCc--------ccccccCcccccccCCCCCcccCCCCchhHHHHHH
Q psy14299 156 NSVSWNPHKMLGAPL-QCSILLIKEKGLLHQANATAA--------TYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLM 226 (448)
Q Consensus 156 D~~~~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~--------~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (448)
-+++.|+.|.++.|. -+|+++..++..........+ .++.+-. .+.
T Consensus 303 ~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~------~~p------------------- 357 (527)
T PRK09275 303 TILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLT------TDP------------------- 357 (527)
T ss_pred EEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhcc------CCc-------------------
Confidence 255668889886553 256665544322211111000 0000000 000
Q ss_pred HHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHH-
Q psy14299 227 WKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLW- 305 (448)
Q Consensus 227 ~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 305 (448)
.--..|++.+.-+|. ...+...|.+.+.+.+..
T Consensus 358 -------~~~~fidrlvad~~~---------------------------------------v~~~~t~~~s~p~Q~a~al 391 (527)
T PRK09275 358 -------EKLKFIDRLVADSRQ---------------------------------------VALNHTAGLSTPQQVQMAL 391 (527)
T ss_pred -------chhhhHHHHHHHHHH---------------------------------------HHHhhccCCCCHHHHHHHH
Confidence 000122222211111 111222355555555422
Q ss_pred ----HHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhh--hhhhH
Q psy14299 306 ----LMWKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTL--SKVAP 379 (448)
Q Consensus 306 ----~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~--~~~~~ 379 (448)
..++. .....+++.+...+.++.+.+.|. . ++.. .+|..+.++|.-.+. +.......++.+.+ +....
T Consensus 392 ~~~~all~~-~~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~~--~~p~g~fY~~~di~~-~~~~~~g~~f~~~l~~~~~~~ 465 (527)
T PRK09275 392 FSLFALLDE-EDAYKKAMKDIIRRRYKALYEGLG-L-PEPE--DPNNAAYYTLIDLEE-WAEKNYGKEFADYLKKNYSPV 465 (527)
T ss_pred HHHHHHHhC-chHHHHHHHHHHHHHHHHHHHHcC-C-CCcC--CCCCeeEEEEEEhHH-hhhhccCchhhhhhhccCCHH
Confidence 22332 334466677777777777777772 2 2221 246666666632211 00000000000000 00124
Q ss_pred HHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHHhhhh
Q psy14299 380 RIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDLEMQA 442 (448)
Q Consensus 380 ~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~~~~~ 442 (448)
++..+|.++..+.+.|+...|. .++++|+|+. ..+++++....+.|+++..+...+.+.
T Consensus 466 ~f~~~Ll~e~gV~v~PG~~Fg~-~~~~vRis~a---~~~~~~~~~~~~rl~~~l~~y~~~~~~ 524 (527)
T PRK09275 466 DLLFRLAEETGVVLLPGGGFGG-PEWSVRVSLA---NLNEEDYAKIGKAIRKLLDEYYEEYKK 524 (527)
T ss_pred HHHHHHHhcCCEEEeCchhhCC-CCCeEEEEEe---cCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6777887664466666655443 2478999995 467899999999999998887766554
No 263
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.52 E-value=4.3e-12 Score=131.25 Aligned_cols=166 Identities=13% Similarity=0.051 Sum_probs=95.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.++|+++||+|+-.|+..+|..... .|.+ ....+|......|-...-+....+-.. ..+..++.+.
T Consensus 104 ~v~f~~sGseA~e~A~klar~~~~~----~~~~-~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (423)
T PRK05964 104 HVFFSDSGSVAVEVALKMALQYWRN----RGEP-GRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPP 178 (423)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHh----cCCC-CCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCc
Confidence 4799999999999999999875210 1111 123345555555544333333222110 0123344321
Q ss_pred C--CCcCHHHHHHHHHHhhhcCCCcEEEEEec-cCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccchhh
Q psy14299 75 R--GQMICSFLEQTIQTSLAEKKIPLFVNATA-GTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF 147 (448)
Q Consensus 75 ~--g~id~e~Le~~l~~~~~~~~~~~lVv~~~-~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~ 147 (448)
+ ...+++++++.+++. +..+.+|++.- .....|...| +++|.++|++||+++++|++|.+.-.....+..
T Consensus 179 ~d~~~~~~~~l~~~l~~~---~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~ 255 (423)
T PRK05964 179 DGYEQATLDALEALLEKH---AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFAC 255 (423)
T ss_pred chhHHHHHHHHHHHHHhC---CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHH
Confidence 1 122378888888642 23455566654 3555665544 999999999999999999998642111111111
Q ss_pred hhcCCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 148 VLKGINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 148 ~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
...++ ..|++++ .|++++. ..+|.++.+++
T Consensus 256 ~~~~v-~pDi~~~--~K~l~gG~~p~~av~~~~~ 286 (423)
T PRK05964 256 EQAGV-SPDIMCL--SKGLTGGYLPLAATLCTAE 286 (423)
T ss_pred HhcCC-CCCeeee--ehhhhcCcccceEEEEcHH
Confidence 11233 3687766 4999776 46787766543
No 264
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.52 E-value=4.9e-12 Score=129.49 Aligned_cols=153 Identities=10% Similarity=-0.009 Sum_probs=107.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC--CCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER--GQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~--g~id~e 81 (448)
..++|+|+++++.+++.+...+ ++...|+++...+..+...++..|. +++.+|.+++ +.+|++
T Consensus 92 ~i~it~Ga~~al~~~~~~l~~~------------gd~~~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~ 156 (393)
T TIGR03538 92 HVLPVNGTREALFAFAQAVINP------------GQAPLVVMPNPFYQIYEGAALLAGA---EPYFLNCTAENGFLPDFD 156 (393)
T ss_pred eEEECCCcHHHHHHHHHHHcCC------------CCcceEEecCCCCcchHHHHHhcCC---eEEEeeccccCCCCCCHH
Confidence 3678999999988777665542 1222488888888888888888888 7889998643 478999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEeccccccccccc-chhh---hhcCCC-
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSE-KYSF---VLKGIN- 153 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~-~~~~---~~~~~~- 153 (448)
++++++.+ ++++++++.++|+||.+.+ +++|.++|++||+++++|.+|.-...... .... .+....
T Consensus 157 ~l~~~~~~------~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 230 (393)
T TIGR03538 157 AVPESVWR------RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGR 230 (393)
T ss_pred HHHHHHhh------cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccc
Confidence 99998854 4789889999999998877 78899999999999999999875433110 0000 000010
Q ss_pred ---CccEEEECCccccCCC-CceEEEEE
Q psy14299 154 ---RANSVSWNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 154 ---~aD~~~~s~hK~l~~P-~g~G~l~v 177 (448)
.--+++.|+.|.++.| .-+|+++.
T Consensus 231 ~~~~~vi~i~S~SK~~~~~GlRvG~~i~ 258 (393)
T TIGR03538 231 DDFRRCLVFHSLSKRSNLPGLRSGFVAG 258 (393)
T ss_pred cccccEEEEecchhhcCCcccceEEEec
Confidence 0116677899965444 44666554
No 265
>KOG0259|consensus
Probab=99.52 E-value=1.3e-11 Score=120.03 Aligned_cols=297 Identities=12% Similarity=0.061 Sum_probs=189.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec--CCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT--NERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~--~~~g~id~e 81 (448)
++++|+|.+.|+-+++.+..+ |+.-|++++...+-+..-+...|+ .++.... +.++++|++
T Consensus 128 DV~ltsGC~qAIe~~i~~LA~--------------p~aNILlPrPGfp~Y~~~a~~~~l---EVR~ydlLPe~~weIDL~ 190 (447)
T KOG0259|consen 128 DVVLTSGCSQAIELAISSLAN--------------PGANILLPRPGFPLYDTRAIYSGL---EVRYYDLLPEKDWEIDLD 190 (447)
T ss_pred ceEEeccchHHHHHHHHHhcC--------------CCCceecCCCCCchHHHhhhhcCc---eeEeecccCcccceechH
Confidence 589999999999999877654 445589999888888888889998 5666654 458899999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHcCCEEEEecccccccccccchhh--hhcCCCCcc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF--VLKGINRAN 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~--~~~~~~~aD 156 (448)
.+|.++++ ++.++++..++|+.|.+ +-|++|+++|+++|+.++-|..|+-.++....+-. .+.. .+-
T Consensus 191 ~veal~DE------NT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fss--iVP 262 (447)
T KOG0259|consen 191 GVEALADE------NTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSS--IVP 262 (447)
T ss_pred HHHHhhcc------CeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccc--cCc
Confidence 99999977 58999999999999976 45999999999999999999988765442111100 0111 133
Q ss_pred EEEE-CCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhC-hH
Q psy14299 157 SVSW-NPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARG-NL 233 (448)
Q Consensus 157 ~~~~-s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~ 233 (448)
+++. +..|-...| .-.|.+.+.+..= .+.+ -+ ..
T Consensus 263 VitlggisKrW~VPGWRlGWi~~hD~~g----------vf~~---------------------------------~~~~q 299 (447)
T KOG0259|consen 263 VITLGGISKRWIVPGWRLGWIALHDPRG----------VFRD---------------------------------TKVVQ 299 (447)
T ss_pred eEeecccccccccCCceeeeEEEecccc----------cccc---------------------------------hHHHH
Confidence 4443 334533333 3345555533310 0000 00 01
Q ss_pred HHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcC
Q psy14299 234 GFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 313 (448)
Q Consensus 234 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (448)
++.+.++.... -. ..-+-++-.-|..-.+
T Consensus 300 ~~~~~~~~~~~----p~-----------------------------------------------TiiQ~AlP~IL~kTp~ 328 (447)
T KOG0259|consen 300 GIKNFLDIIPG----PA-----------------------------------------------TIIQGALPDILEKTPE 328 (447)
T ss_pred HHHHHHhccCC----cc-----------------------------------------------HhHHHHhHHHHHhChH
Confidence 22221111100 00 0001111222333345
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccC-CCccccchhhhhhhhhhhHHHHHHHHhCCcEE
Q psy14299 314 LGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVS-LRDKVEDETWWSTLSKVAPRIKEKLVLGGTLM 392 (448)
Q Consensus 314 ~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~ 392 (448)
+=|+....-..++++...+.|+++|++... ..|...++...-.+-. +.+.. ....+.++|.++-.++
T Consensus 329 efF~k~~~~lk~na~l~y~~Lk~IP~l~cp-~kPeg~mylmv~l~~s~~~~~~-----------dD~dFc~kL~~Eesv~ 396 (447)
T KOG0259|consen 329 EFFDKKLSFLKSNADLCYSRLKDIPCLTCP-VKPEGCMYLMVKLNLSLFPDIE-----------DDVDFCQKLAREESVI 396 (447)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCcccC-cCCCcceEEEeccchhhhcccc-----------ccHHHHHHHhhhcceE
Confidence 557777888889999999999999999865 5666665554322111 11100 1136888888776676
Q ss_pred EEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 393 IGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 393 ~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
+-|+...|. ++|+|++++ ...+.++..++.|++...+..
T Consensus 397 ~LPG~af~~--~nw~Ri~i~----~~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 397 CLPGQAFGL--KNWLRIVIT----VEEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred EeccccccC--CCeEEEEEc----cChHHHHHHHHHHHHHHHhhh
Confidence 666655554 599999996 367788888888888876654
No 266
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.52 E-value=1.5e-11 Score=125.13 Aligned_cols=151 Identities=17% Similarity=0.142 Sum_probs=97.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.++|+++|++||..|+..++... .++.+|..+...|-+........+... ..+..+|.+
T Consensus 88 ~~~~~~sG~~a~~~A~~~a~~~~-----------g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 155 (377)
T PRK02936 88 LVFFCNSGAEANEAALKLARKHT-----------GKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFN- 155 (377)
T ss_pred EEEEeCCcHHHHHHHHHHHHHhc-----------CCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCC-
Confidence 47899999999999999877531 134466666788877776666544311 012233332
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccccc----CHHHHHHHHHHcCCEEEEecccccccccccchhhhhc
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFD----PLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~----~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
|++++++.+.+ ++++|++....++.|... ++++|.++|++||+++++|++|.+.............
T Consensus 156 ----d~~~l~~~~~~------~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~ 225 (377)
T PRK02936 156 ----DIKALKEVMNE------EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQF 225 (377)
T ss_pred ----CHHHHHHhccC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhh
Confidence 78999988853 477888888888777653 3999999999999999999998642111111110011
Q ss_pred CCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 151 GINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
++ ..|.+ +..|.+++-...|++..++
T Consensus 226 ~~-~~di~--t~sK~l~~G~~ig~v~~~~ 251 (377)
T PRK02936 226 GL-DPDIV--TVAKGLGNGIPVGAMIGKK 251 (377)
T ss_pred CC-CCcEE--EEcccccCCCccEEEEEcH
Confidence 22 24655 4689887423466666543
No 267
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.52 E-value=4.8e-12 Score=129.62 Aligned_cols=161 Identities=18% Similarity=0.099 Sum_probs=106.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCC----CcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERG----QMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g----~id 79 (448)
.++|+++||+||..|+..++.... .+-+ ....+|......|-+...++...+....+....|...+. .-|
T Consensus 95 ~v~f~~SGseA~e~Aik~ar~~~~-----~~~~-~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d 168 (395)
T PRK03715 95 KVFFANSGAEANEGAIKLARKWGR-----KHKN-GAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELND 168 (395)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhh-----ccCC-CCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCch
Confidence 479999999999999999986411 0101 134567778889999888877666421011111111111 237
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccc-hhhhhcCCCC
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEK-YSFVLKGINR 154 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~-~~~~~~~~~~ 154 (448)
++++++.+.+ ++.+|++.....+.|.+.| +++|.++|++||+++++|++|.+ .-.... +.....++ .
T Consensus 169 ~~~l~~~l~~------~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG-~GRtG~~~a~~~~gv-~ 240 (395)
T PRK03715 169 IASVEKLITD------KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTG-CGRTGTLFAYELSGI-E 240 (395)
T ss_pred HHHHHHHcCC------CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC-CCCCcchhhHhhcCC-C
Confidence 8888888853 4678888888888888877 99999999999999999999884 211111 11111233 3
Q ss_pred ccEEEECCccccCCCCceEEEEEecc
Q psy14299 155 ANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 155 aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
.|++++ .|.+++....|.++.+++
T Consensus 241 PDi~t~--gK~lg~G~p~~av~~~~~ 264 (395)
T PRK03715 241 PDIMTL--GKGIGGGVPLAALLAKAE 264 (395)
T ss_pred Cceeee--hhhhhCCcceEEEEEccc
Confidence 688766 498887555777777654
No 268
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.52 E-value=3.4e-12 Score=132.13 Aligned_cols=150 Identities=13% Similarity=0.115 Sum_probs=105.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCch------HHHHHHHHhCCCCCcEEEEecCCCCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHY------SMLKAAHWLGIGMDNVIRVKTNERGQ 77 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~------s~~~~~~~~g~~~~~v~~v~~~~~g~ 77 (448)
..+++++|+.|++.++.. .. +++.|++++.+|. ++...++..|+ +++.++.+ ..
T Consensus 139 ~alvv~sg~aAi~l~l~~-l~--------------~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~---~~~~v~~~--~~ 198 (454)
T TIGR00474 139 DALVVNNNAAAVLLALNT-LA--------------KGKEVIVSRGELVEIGGSFRIPDVMEQSGA---KLVEVGTT--NR 198 (454)
T ss_pred cEEEECCHHHHHHHHHHH-hC--------------CcCEEEECCChhhhhcchhhHHHHHHHcCC---EEEEeCCC--CC
Confidence 357889999998777743 22 5667888987764 23445566677 67777653 34
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCCc--cc--cccCHHHHHHHHHHcCCEEEEeccccccc----ccccchhhhh
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTTV--LG--AFDPLDEIATVCEKYDLWMHVDACWGGSL----IFSEKYSFVL 149 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~--tG--~~~~l~~I~~ia~~~g~~l~VD~A~~~~~----~~~~~~~~~~ 149 (448)
.+++++++++.+ ++++|++++.+|+ .| ...|+++|+++||+||++++||.+.|... +-.+..+...
T Consensus 199 ~~l~dle~aI~~------~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~ 272 (454)
T TIGR00474 199 THLKDYEDAITE------NTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQ 272 (454)
T ss_pred CCHHHHHHhcCc------CCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccc
Confidence 589999999864 5889999999886 46 47899999999999999999998644310 0000000000
Q ss_pred cC-CCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 150 KG-INRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 150 ~~-~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
.. -.++|++++|+|||+++|. .|+++.+++
T Consensus 273 ~~~~~GaDiv~fSg~K~LgGp~-~G~i~g~~~ 303 (454)
T TIGR00474 273 EVIAAGVDLVTFSGDKLLGGPQ-AGIIVGKKE 303 (454)
T ss_pred cHhHcCCCEEEecCccccCCCe-EEEEEECHH
Confidence 00 1258999999999999994 788887653
No 269
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.51 E-value=7.7e-12 Score=130.42 Aligned_cols=290 Identities=14% Similarity=0.096 Sum_probs=188.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|++.|+.+++.+..+ |++.|++.+.+|+....+.+..|+ +++.||.| +..+|+++|
T Consensus 157 ~IiiT~G~q~al~l~~~~l~~--------------pGd~v~vE~PtY~~~~~~~~~~g~---~~~~vp~d-~~G~~~e~l 218 (459)
T COG1167 157 QIVITSGAQQALDLLLRLLLD--------------PGDTVLVEDPTYPGALQALEALGA---RVIPVPVD-EDGIDPEAL 218 (459)
T ss_pred eEEEeCCHHHHHHHHHHHhCC--------------CCCEEEEcCCCcHHHHHHHHHcCC---cEEecCCC-CCCCCHHHH
Confidence 478999999998776655444 788999999999999999999999 89999998 455899999
Q ss_pred HHHHHHhhhcCCCcEEE-EEeccCCccccccCH---HHHHHHHHHcCCEEEEecccccccccccchhhhhcCCC--CccE
Q psy14299 84 EQTIQTSLAEKKIPLFV-NATAGTTVLGAFDPL---DEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGIN--RANS 157 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lV-v~~~~~t~tG~~~~l---~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~--~aD~ 157 (448)
++.+++. +++++ +.....|+||...++ ++|.++|++||++++-|..++-.......... +..+. .-=+
T Consensus 219 e~~~~~~-----~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~-l~~ld~~~rVi 292 (459)
T COG1167 219 EEALAQW-----KPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPP-LKALDAPGRVI 292 (459)
T ss_pred HHHHhhc-----CCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCC-hHhhCCCCCEE
Confidence 9999863 45554 445678899998886 56999999999999999998876653221110 11111 1237
Q ss_pred EEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 158 VSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 158 ~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
++.|+.|.+..-..+|+++... .+....... ...... .+..+.-..+...+. .| .+.+
T Consensus 293 y~gSFSK~l~PglRlG~vv~p~-~~~~~~~~~-k~~~~~-----------------~~s~~~Q~~la~~l~-~G--~~~~ 350 (459)
T COG1167 293 YLGSFSKTLAPGLRLGYVVAPP-ELIEKLLRL-KQAADL-----------------GPSSLSQAALAAFLL-SG--HYDR 350 (459)
T ss_pred EEeeehhhcccccceeeeeCCH-HHHHHHHHH-HHHhcC-----------------CCChHHHHHHHHHHH-cC--CHHH
Confidence 7789999998777888877644 333222110 000000 000000000000001 11 1222
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
.++
T Consensus 351 -----------------------------------------------------------------------------hl~ 353 (459)
T COG1167 351 -----------------------------------------------------------------------------HLR 353 (459)
T ss_pred -----------------------------------------------------------------------------HHH
Confidence 133
Q ss_pred HHHHHHHHHHHHHHHHhhcCC--CeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEe
Q psy14299 318 HFVDNAVDCSRYFLSQISQRP--GFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGY 395 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~p--g~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~ 395 (448)
+++..+.+..+.+.+.|.+.. ++++ ..|..+.+.+.-.|++++ ..++.+...++|+.+..+
T Consensus 354 ~lR~~y~~rr~~l~~~L~~~~~~~~~~--~~p~gG~flwl~l~~~~~---------------~~~l~~~a~~~gv~i~~~ 416 (459)
T COG1167 354 RLRREYARRRDALLEALAEYLPELATW--TRPEGGLFLWLELPEGID---------------ARELLAAALEKGVVVTPL 416 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeee--ecCCceEEEEEEcCCCCC---------------HHHHHHHHHHCCCEEEcC
Confidence 455566777788888888863 3444 456667777765565554 237888999998666553
Q ss_pred eecCCc--ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 396 QPLQHR--NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 396 ~~~~g~--~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
+..... ...+++|+++. +.+++++++.++.|.++.++.
T Consensus 417 g~~f~~~~~~~~~~Rl~~s---~~~~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 417 GSAFSADGDPRNGLRLSFS---SPSEEEIEEGIKRLAALLREA 456 (459)
T ss_pred CccccCCCCCCCeEEEEcC---CCCHHHHHHHHHHHHHHHHHH
Confidence 433322 12469999995 567899999988888887654
No 270
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.51 E-value=1.4e-11 Score=126.14 Aligned_cols=162 Identities=20% Similarity=0.136 Sum_probs=96.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCC----CcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERG----QMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g----~id 79 (448)
..+||+||++||..++.+++.... +.+. .++.++......|-....+....+....+....+..++. ..|
T Consensus 98 ~v~~~~gg~eA~~~al~~a~~~~~----~~~~--~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 171 (396)
T PRK02627 98 KVFFCNSGAEANEAAIKLARKYGH----KKGI--EKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFND 171 (396)
T ss_pred EEEECCCcHHHHHHHHHHHHHHhc----ccCC--CCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCC
Confidence 478999999999999998876521 0011 013345555566655444444333210000011111111 118
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccc----cCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCc
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF----DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRA 155 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~----~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~a 155 (448)
++++++++.+ ++++|+++.+.+++|.. +.+++|.++|++||+++++|++|++.............++ ..
T Consensus 172 ~~~l~~~i~~------~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~-~p 244 (396)
T PRK02627 172 IEALKAAITD------KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGI-EP 244 (396)
T ss_pred HHHHHHhcCC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCC-CC
Confidence 9999998843 57888888888888842 2489999999999999999999884311111011111122 24
Q ss_pred cEEEECCccccCCCCceEEEEEecc
Q psy14299 156 NSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 156 D~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
|.++ ..|.+++...+|.++.+++
T Consensus 245 di~t--~sK~~~~G~rig~~~~~~~ 267 (396)
T PRK02627 245 DIMT--LAKGLGGGVPIGAVLAKEK 267 (396)
T ss_pred CEEE--EcchhhCCcccEEEEEcHH
Confidence 6655 4698885456788777543
No 271
>KOG0256|consensus
Probab=99.50 E-value=8e-12 Score=122.59 Aligned_cols=299 Identities=12% Similarity=0.129 Sum_probs=189.7
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH-HhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH-WLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~-~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
.++|.|+|-+|-..+.++.. |++..+++...+..+..-++ ..|+ ++++|.+.. +.+++++
T Consensus 149 ~Vv~~G~T~ane~l~fcLad--------------pgdafLvPtPyY~gfdrdl~~rTgv---eivpv~c~Ss~~f~itv~ 211 (471)
T KOG0256|consen 149 VVVTNGATSANETLMFCLAD--------------PGDAFLVPTPYYPGFDRDLRWRTGV---EIVPVHCSSSNGFQITVE 211 (471)
T ss_pred eEEecccchhhHHHHHHhcC--------------CCceeeecCCCCCcccccceeccCc---eEEEEEeecCCCccccHH
Confidence 67889999998776666554 77888999888888876666 4466 677777654 4599999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhc---CCC-C
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK---GIN-R 154 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~---~~~-~ 154 (448)
+||+++.+..+.+.+++.|+++.|+|+.|...+ +..+.+++.++++.+++|..|++.++....+..... ... .
T Consensus 212 alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~ 291 (471)
T KOG0256|consen 212 ALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLD 291 (471)
T ss_pred HHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccC
Confidence 999999998888999999999999999998866 555667788999999999999887763332211100 000 1
Q ss_pred cc--EEEECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhC
Q psy14299 155 AN--SVSWNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARG 231 (448)
Q Consensus 155 aD--~~~~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 231 (448)
.| -++.+..|=+|.| .-.|++|..++.....+.. ...|- .
T Consensus 292 ~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~k-mssf~-~----------------------------------- 334 (471)
T KOG0256|consen 292 PDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATK-MSSFG-L----------------------------------- 334 (471)
T ss_pred CCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHH-Hhhcc-C-----------------------------------
Confidence 12 4566888988877 3467777766655443321 11111 0
Q ss_pred hHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHh
Q psy14299 232 NLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKAR 311 (448)
Q Consensus 232 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (448)
..+..++ +.+.|++|-+ .
T Consensus 335 vSs~tQ~-------------~la~LLSD~~-------------------------------------------------f 352 (471)
T KOG0256|consen 335 VSSQTQY-------------LLASLLSDEE-------------------------------------------------F 352 (471)
T ss_pred CcHHHHH-------------HHHHHhchHH-------------------------------------------------H
Confidence 0011110 1111222211 0
Q ss_pred cCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcE
Q psy14299 312 GNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTL 391 (448)
Q Consensus 312 ~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~ 391 (448)
-.+-+++..+|....-+|+.+.|+++ |+..+ +...+.+++.-...-++..+... + .++.++++..-.+
T Consensus 353 ~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl--~s~AGlF~wvDlr~lL~s~tfe~----E-----l~Lw~~i~~~vkl 420 (471)
T KOG0256|consen 353 TREYLRENNKRLRIRHRYIVEGLKAL-GIPCL--KSNAGLFCWVDLRKLLTSLTFEG----E-----LELWERILDNVKL 420 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHhc-CCcee--ecCCeeEEEEEhHHhcCcCChHH----H-----HHHHHHHHHhhcc
Confidence 11223445555666678888999998 88875 56778888743222222221111 1 2577777777337
Q ss_pred EEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 392 MIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 392 ~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
.++|+.......+||+|+++. ...++.++-.++.|+....
T Consensus 421 nlSpG~s~~C~EpGWFRvcFA---n~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 421 NLSPGSSCHCHEPGWFRVCFA---NMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred ccCCCCcceecCCCeEEEEec---cCCHHHHHHHHHHHHHHHH
Confidence 777776655556799999996 3444444445555555544
No 272
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.50 E-value=2.5e-11 Score=122.78 Aligned_cols=149 Identities=11% Similarity=-0.006 Sum_probs=102.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCC-----c
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQ-----M 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~-----i 78 (448)
..++|+|+++++.+++.+. . +++.|+++...+..+...++..|. +++.+|.++++. .
T Consensus 76 ~I~it~G~~~~i~~~~~~l-~--------------~g~~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~ 137 (360)
T PRK07392 76 WILPGNGAAELLTWAGREL-A--------------QLRAVYLITPAFGDYRRALRAFGA---TVKELPLPLDQPSPGLTL 137 (360)
T ss_pred hEEECCCHHHHHHHHHHHh-C--------------CCCeEEEECCCcHHHHHHHHHcCC---eEEEEecccccCCccccc
Confidence 3678999999987766542 2 234688888999999999999998 788999875543 3
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchh--hhhcCCCCcc
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYS--FVLKGINRAN 156 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~--~~~~~~~~aD 156 (448)
+++.+++.. .++++++++.++|+||.+.+.++|.++++++++ +++|.+|.-......... ......+ -=
T Consensus 138 ~~~~~~~~~-------~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~-~v 208 (360)
T PRK07392 138 RLQTLPPQL-------TPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYP-NL 208 (360)
T ss_pred CHHHHHHhc-------cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCC-CE
Confidence 444444322 246789999999999999999999999999985 777999875432110000 0111110 11
Q ss_pred EEEECCccccCCC-CceEEEEEec
Q psy14299 157 SVSWNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 157 ~~~~s~hK~l~~P-~g~G~l~vr~ 179 (448)
+++.|+.|.++.| .-+|+++..+
T Consensus 209 i~i~S~SK~~~l~GlRiG~~v~~~ 232 (360)
T PRK07392 209 IILRSLTKFYSLPGLRLGYAIAHP 232 (360)
T ss_pred EEEEechhhhcCCchheeeeeCCH
Confidence 5566889998844 4577766633
No 273
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.50 E-value=5.5e-12 Score=122.60 Aligned_cols=142 Identities=15% Similarity=0.099 Sum_probs=110.0
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCc----hHHHHHHHHhCCCCCcEEEEecCCCCCc
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSH----YSMLKAAHWLGIGMDNVIRVKTNERGQM 78 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H----~s~~~~~~~~g~~~~~v~~v~~~~~g~i 78 (448)
+.++.|.+|..|+.+++..... +++.|+.+..-+ .-+....+.+|+ +++.+..+
T Consensus 78 ~aa~a~aSG~AA~~~ai~~la~--------------aGD~iVss~~LYGGT~~lf~~tl~~~Gi---~v~fvd~~----- 135 (426)
T COG2873 78 VAALAVASGQAAITYAILNLAG--------------AGDNIVSSSKLYGGTYNLFSHTLKRLGI---EVRFVDPD----- 135 (426)
T ss_pred hhhhhhccchHHHHHHHHHhcc--------------CCCeeEeeccccCchHHHHHHHHHhcCc---EEEEeCCC-----
Confidence 4567788888888888877655 455566554333 224445577788 79898876
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
|++.++++|++ ++++|.+....|+.+.+-|+++|+++||++|++++||-..+..++.-| .. .++|++
T Consensus 136 d~~~~~~aI~~------nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl~rP-~~------hGADIV 202 (426)
T COG2873 136 DPENFEAAIDE------NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYLCRP-IE------HGADIV 202 (426)
T ss_pred CHHHHHHHhCc------ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcceecch-hh------cCCCEE
Confidence 89999999987 699999999999999999999999999999999999999887755322 11 158999
Q ss_pred EECCccccCCC-CceEEEEEec
Q psy14299 159 SWNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 159 ~~s~hK~l~~P-~g~G~l~vr~ 179 (448)
+-|..||+++. ..+|.+++..
T Consensus 203 vHS~TK~igGhGt~iGG~iVD~ 224 (426)
T COG2873 203 VHSATKYIGGHGTAIGGVIVDG 224 (426)
T ss_pred EEeecccccCCccccceEEEeC
Confidence 99999999886 4456666633
No 274
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.49 E-value=8.5e-12 Score=130.84 Aligned_cols=157 Identities=13% Similarity=0.118 Sum_probs=110.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHh-cCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--C-----
Q psy14299 4 KPFLLPGGSISNMYSICLARYR-LDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--R----- 75 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~-~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~----- 75 (448)
..++|+|+++++.+++.+.... +. .|++.|++....+..+...+++.+.+. +++.++.++ +
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll----------~pGD~Vlv~~P~y~~y~~~~~l~~~g~-~vv~i~~~~~~~~g~~~ 225 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELL----------KKGDKIALMTPIFTPYLEIPELPRYDF-EVVRIKADEMTEDGTHT 225 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcC----------CCCCEEEEeCCCcHHHHHHHHHhcCCc-EEEEeeccccccccccc
Confidence 6889999999988877653221 11 377889999999999999888875533 466777643 2
Q ss_pred CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHc--CCEEEEecccccccccccchhhhhc
Q psy14299 76 GQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKY--DLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 76 g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~--g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
+.+|++++++++++ ++++++++.++|+||.+.+ +++|+++|++| +++++.|.+|+-... .......
T Consensus 226 ~~~d~~~l~~~~~~------~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~ 296 (521)
T TIGR03801 226 WQYPDKELEKLRDP------SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFA 296 (521)
T ss_pred CCCCHHHHHHhcCC------CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhh
Confidence 68999999987643 5889999999999998877 77788889987 999999999985332 1111111
Q ss_pred CCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 151 GINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
....--+++.|..|.++.| .-+|+++..++
T Consensus 297 ~~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 297 ELPYNTIGVYSFSKYFGATGWRLGTIALHKD 327 (521)
T ss_pred hCCCCEEEEEcchhhccCchhhhhhhhcCch
Confidence 1111125667889988654 34566655443
No 275
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.49 E-value=2.7e-11 Score=126.18 Aligned_cols=295 Identities=12% Similarity=0.094 Sum_probs=171.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.++|+++||+||-.|+..||.... ..| ...+|......|-...-+....+-.. ..+..+|.+
T Consensus 143 ~v~f~~SGsEAve~AlklAr~~t~----~~g----r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~- 213 (459)
T PRK11522 143 YSFFCNSGTESVEAALKLAKAYQS----PRG----KFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFG- 213 (459)
T ss_pred EEEEeCCchHHHHHHHHHHHHHhc----cCC----CcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCC-
Confidence 478999999999999999987521 011 12334444455554443333333210 012223322
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccchhhhhc
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
|.+++++.+++....+.++.+|++.......|.+.| ++++.++|++||+.+++|+++.+.--...-+.....
T Consensus 214 ----d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~ 289 (459)
T PRK11522 214 ----NIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHE 289 (459)
T ss_pred ----CHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhcc
Confidence 788999988754333345667888888888898888 999999999999999999998642111111111112
Q ss_pred CCCCccEEEECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHH
Q psy14299 151 GINRANSVSWNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKA 229 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (448)
++ ..|++++ .|.+++- ..+|.++.+++ +...... . ++..... ..+.+ +
T Consensus 290 gv-~PDivt~--gK~lggG~~Pigav~~~~~-i~~~~~~-~-~~~~~~T--------------~~gnp---~-------- 338 (459)
T PRK11522 290 NV-QPDILCL--AKALGGGVMPIGATIATEE-VFSVLFD-N-PFLHTTT--------------FGGNP---L-------- 338 (459)
T ss_pred CC-CCCEEEe--chhhhCCCccceeEEEcHH-HHHHhcc-C-CcccCCC--------------CCCCH---H--------
Confidence 33 3687754 7988753 24777777654 3222111 1 1111100 00011 1
Q ss_pred hChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHH
Q psy14299 230 RGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWK 309 (448)
Q Consensus 230 ~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (448)
.......+++
T Consensus 339 ----------------------------------------------------------------------~~Aaala~L~ 348 (459)
T PRK11522 339 ----------------------------------------------------------------------ACAAALATIN 348 (459)
T ss_pred ----------------------------------------------------------------------HHHHHHHHHH
Confidence 1111223344
Q ss_pred HhcCccHHHHHHHHHHHHHHHHHHhhcCC-CeE-EeccC--CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHH
Q psy14299 310 ARGNLGFRHFVDNAVDCSRYFLSQISQRP-GFR-LVIPE--FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKL 385 (448)
Q Consensus 310 ~~~~~G~~~~~~~~~~l~~~~~~~L~~~p-g~~-l~~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L 385 (448)
.+.+++ +.++..++.+++++.|+++. .+. ++ .+ ....++.+.+.+. .....+.+.|
T Consensus 349 ~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i-~~VrG~Gl~~giel~~~----------------~~~~~i~~~l 408 (459)
T PRK11522 349 VLLEQN---LPAQAEQKGDYLLDGFRQLAREYPDLV-QEARGKGMLMAIEFVDN----------------EIGYNFASEM 408 (459)
T ss_pred HHhcch---HHHHHHHHHHHHHHHHHHHHHhCCCce-eeEEeceeEEEEEecCc----------------hHHHHHHHHH
Confidence 444432 45667777888888877641 121 11 11 2234444443211 1234688899
Q ss_pred HhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHHh
Q psy14299 386 VLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDLE 439 (448)
Q Consensus 386 ~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~~ 439 (448)
.++| +++.+... +. ..+|+.+ ...+|++|||+++++|+++.+++.+.
T Consensus 409 ~~~G-vl~~~~~~-~~---~~lr~~P--pl~~t~~~id~~l~~l~~~l~~~~~~ 455 (459)
T PRK11522 409 FRQR-VLVAGTLN-NA---KTIRIEP--PLTLTIEQCEQVLKAARKALAAMRVS 455 (459)
T ss_pred HHCC-eEEEecCC-CC---CEEEEEC--CccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999 55544322 22 6899999 68999999999999999998876644
No 276
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.49 E-value=5.1e-12 Score=128.48 Aligned_cols=140 Identities=15% Similarity=0.118 Sum_probs=99.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCc----hHHHHHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSH----YSMLKAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H----~s~~~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
.++.+++||.|+.+++.+... +++.|+++...+ ..+...+...|+ ++..++.++...++
T Consensus 81 ~av~~sSG~aAi~~al~all~--------------~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi---~v~fvd~~~~~~~~ 143 (384)
T PRK06434 81 HALSFSSGMGAITSAILSLIK--------------KGKRILSISDLYGQTFYFFNKVLKTLGI---HVDYIDTDRLNSLD 143 (384)
T ss_pred cEEEeCCHHHHHHHHHHHHhC--------------CCCEEEEecCccchHHHHHHHHHHhcCc---EEEEECCCChhhee
Confidence 468899999998888766532 667788775422 222355556677 68788775322222
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+++ .++++|.+.+++|+++.+.|+++|+++||+++ ++||++++.....-+ . + .++|+++
T Consensus 144 -------l~~-----~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~p-l-----~-~gaDivv 202 (384)
T PRK06434 144 -------FDP-----SNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQNP-L-----D-LGADVVI 202 (384)
T ss_pred -------ecC-----CCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccCCc-h-----h-cCCCEEE
Confidence 221 25789999999999999999999999999998 567999875543111 1 1 1589999
Q ss_pred ECCccccCCCCc--eEEEEEeccc
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKEKG 181 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~~~ 181 (448)
+|.||++++|.+ .|++..++++
T Consensus 203 ~S~tK~i~G~~d~~gG~vv~~~~~ 226 (384)
T PRK06434 203 HSATKYISGHSDVVMGVAGTNNKS 226 (384)
T ss_pred eecccccCCCCCceEEEEecCcHH
Confidence 999999999886 5555555543
No 277
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.49 E-value=4.9e-11 Score=122.56 Aligned_cols=156 Identities=17% Similarity=0.178 Sum_probs=97.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhC-------CC--CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLG-------IG--MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g-------~~--~~~v~~v~~~~ 74 (448)
..+|+++|++||..|+..+|..... ..+ . .++.+|.++...|-+...+....+ .. ...+..+|.+
T Consensus 99 ~~~~~~sGseA~e~a~klar~~~~~---~~~-~-~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 172 (403)
T PRK05093 99 RVFFANSGAEANEAAFKLARRYACD---RHG-P-EKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFN- 172 (403)
T ss_pred EEEEeCchHHHHHHHHHHHHHHHhh---cCC-C-CCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCC-
Confidence 4789999999999999988765210 001 0 244567777888887665444322 11 1124444444
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccch-hhhh
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKY-SFVL 149 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~-~~~~ 149 (448)
|++++++.+.+ ++++|++.-...+.|.+.| +++|.++|++||+++++|.+|++. ...... ....
T Consensus 173 ----d~~~l~~~l~~------~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-g~~g~~~~~~~ 241 (403)
T PRK05093 173 ----DLAAVKAVIDD------HTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGM-GRTGDLFAYMH 241 (403)
T ss_pred ----CHHHHHHHhcC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC-CCCccchhhhh
Confidence 88999988853 4777888754444454433 999999999999999999998842 221111 1111
Q ss_pred cCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 150 KGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 150 ~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
.++ ..|.. +..|.+++-..+|.++.++
T Consensus 242 ~~~-~pdi~--s~sK~l~~G~rig~vv~~~ 268 (403)
T PRK05093 242 YGV-TPDIL--TSAKALGGGFPIGAMLTTA 268 (403)
T ss_pred cCC-CCCEE--EecccccCCcceEEEEEcH
Confidence 122 24654 4579887433477777654
No 278
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.48 E-value=2e-11 Score=124.16 Aligned_cols=153 Identities=16% Similarity=0.102 Sum_probs=100.4
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCC------cEEEEecCCCCCc
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMD------NVIRVKTNERGQM 78 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~------~v~~v~~~~~g~i 78 (448)
++|+++||++|..|+..++... ..+.+|..+...|-+...++...+.... .+..++.. -..
T Consensus 87 ~~~~~SGseA~~~Al~~ar~~~-----------~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 153 (375)
T PRK04260 87 AFFCNSGAEANEAAIKIARKAT-----------GKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA--IFN 153 (375)
T ss_pred EEEcCccHHHHHHHHHHHHHhc-----------CCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe--CCC
Confidence 5899999999999999987641 1334566677889888777665443110 00001100 023
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccccccc-chhhhhcCCC
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSE-KYSFVLKGIN 153 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~-~~~~~~~~~~ 153 (448)
|++++++.+.+ ++.+|++..+.+++|.+.| +++|.++|+++|+++++|++|.+ ..... .+.....++
T Consensus 154 dl~~l~~~l~~------~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g-~g~~g~~~~~~~~~~- 225 (375)
T PRK04260 154 DLNSVKALVNK------NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTG-MGRTGKLYAFEHYGI- 225 (375)
T ss_pred CHHHHHHhcCC------CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC-CCcccchhhhHhhCC-
Confidence 88999988743 3678888888888898765 89999999999999999999864 22111 111111233
Q ss_pred CccEEEECCccccCCCCceEEEEEecc
Q psy14299 154 RANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 154 ~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
..|.+ +..|.++.-...|.++.+++
T Consensus 226 ~pdi~--t~sK~l~~G~~ig~~~~~~~ 250 (375)
T PRK04260 226 EPDIF--TLAKGLANGVPVGAMLAKSS 250 (375)
T ss_pred CCCEE--EecccccCCcceEEEEEcHH
Confidence 24644 57998874345788777553
No 279
>PLN02672 methionine S-methyltransferase
Probab=99.48 E-value=1.5e-11 Score=136.98 Aligned_cols=115 Identities=18% Similarity=0.166 Sum_probs=90.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|+++++..++.+..+ +++.|+++...+..+...++..|. +++.+|.++ +..+|++
T Consensus 756 ~IIvt~Gs~elL~lll~aLl~--------------pGD~VLVp~PtY~~Y~~~a~~~Ga---~vv~Vpl~~e~gf~lD~d 818 (1082)
T PLN02672 756 EFVYGDTSLALFNKLVLCCVQ--------------EGGTLCFPAGSNGTYVSAAKFLKA---NFRRIPTKSSDGFKLTAK 818 (1082)
T ss_pred EEEEeCCHHHHHHHHHHHHcC--------------CCCEEEEeCCChHHHHHHHHHcCC---EEEEEecccccCCCCCHH
Confidence 366777776666566555444 677899999999999999999998 789999864 4688999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccC-CccccccC---HHHHHHHHHHcCCEEEEecccccccc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGT-TVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLI 140 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~-t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~ 140 (448)
.|++++++. +.+.|+++.++ |+||.+.+ +++|.++|++||+++++|.+|+...+
T Consensus 819 ~Le~al~~~-----~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~F 876 (1082)
T PLN02672 819 TLASTLETV-----KKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEY 876 (1082)
T ss_pred HHHHHhccC-----CCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCcccc
Confidence 999998541 23478888887 99998755 77788899999999999999974443
No 280
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.48 E-value=2.1e-11 Score=124.58 Aligned_cols=162 Identities=12% Similarity=0.121 Sum_probs=108.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH-HHHhCCCCCcEEEEe----------c
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA-AHWLGIGMDNVIRVK----------T 72 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~-~~~~g~~~~~v~~v~----------~ 72 (448)
.+++|++||+|+.++..... .++++| +...|..-..+ ....|. .+.-+. .
T Consensus 95 ~aV~v~sGTaAl~ll~~l~v--------------~pGd~V--p~n~~f~Tt~ahI~~~Ga---~fvDi~~d~a~~~~~~~ 155 (460)
T PRK13237 95 HVVPTHQGRGAENLLSRIAI--------------KPGQYV--PGNMYFTTTRYHQELNGG---IFVDIIIDEAHDAQSDH 155 (460)
T ss_pred eEEEeCCHHHHHHHHHHhCC--------------CCcCEE--CCccchHhhHHHHHhCCc---EEEeeecccccccccCC
Confidence 36899999999887533221 155544 77888877766 455555 343332 1
Q ss_pred CCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcc-cc---ccCHHHHHHHHHHcCCEEEEecccccccc-cccc---
Q psy14299 73 NERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVL-GA---FDPLDEIATVCEKYDLWMHVDACWGGSLI-FSEK--- 144 (448)
Q Consensus 73 ~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~t-G~---~~~l~~I~~ia~~~g~~l~VD~A~~~~~~-~~~~--- 144 (448)
+.+|.+|+++|+++|++.. ..++.+|.++...+.. |. ..++++|.++|++||+++|.|+|+..+.. ++..
T Consensus 156 p~tgnlD~d~Le~~I~~~~--~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~ 233 (460)
T PRK13237 156 PFKGNVDLDKLQALIDEVG--AENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREE 233 (460)
T ss_pred CCCCCcCHHHHHHHhcccc--CCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhccccc
Confidence 2468999999999997521 1234455555555666 43 35799999999999999999999987733 2211
Q ss_pred -hhh-hh----c-CCCCccEEEECCccccCCCCceEEEEEeccchhhhhc
Q psy14299 145 -YSF-VL----K-GINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQAN 187 (448)
Q Consensus 145 -~~~-~~----~-~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~ 187 (448)
+.. .+ . -.+.+|.+++|+||.+.+|. .|++..+++++.....
T Consensus 234 ~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~-GG~i~t~D~eL~~~~r 282 (460)
T PRK13237 234 GYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI-GGFLAMNDEELFDEAK 282 (460)
T ss_pred ccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC-ceEEEECCHHHHHHHH
Confidence 111 00 0 01358999999999999987 5667787877655543
No 281
>KOG1357|consensus
Probab=99.47 E-value=1.2e-12 Score=129.68 Aligned_cols=273 Identities=15% Similarity=0.148 Sum_probs=176.9
Q ss_pred CCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCC------CcE-EEEEeccCCcccc
Q psy14299 39 PPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKK------IPL-FVNATAGTTVLGA 111 (448)
Q Consensus 39 ~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~------~~~-lVv~~~~~t~tG~ 111 (448)
|+-.|+.++..|.|+...|++.|. .++...++ |+++||+.|++..-++. .-+ +|++....++-|.
T Consensus 220 ~gsLIiSDelNHaSi~~GaRLSgA---tiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~ 291 (519)
T KOG1357|consen 220 KGSLIISDELNHASLITGARLSGA---TTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGT 291 (519)
T ss_pred CCcceeeccccchheeccccccCc---eEEEEecC-----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCe
Confidence 566788899999999999999999 78889998 99999999987554432 113 4555556668999
Q ss_pred ccCHHHHHHHHHHcCCEEEEecccccccccccchhh-hhcC--CCCccEEEECCccccCCCCceEEEEEeccchhhhhcc
Q psy14299 112 FDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF-VLKG--INRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANA 188 (448)
Q Consensus 112 ~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~-~~~~--~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~ 188 (448)
+.+++++.+++|+|.+++++|+||+.|++....... .+.+ -..+|++...+.|.+++ +|.....++.+......
T Consensus 292 iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga---~GGyiagsk~lid~lrt 368 (519)
T KOG1357|consen 292 IVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGA---AGGYIAGSKELIDYLRT 368 (519)
T ss_pred ecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccc---ccceecCcHHHHhhhcc
Confidence 999999999999999999999999999873211000 0001 12489999999999884 45544445544433322
Q ss_pred CCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhh
Q psy14299 189 TAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQAN 268 (448)
Q Consensus 189 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (448)
..+.-..... .+.+...-.+....-..|
T Consensus 369 ~s~~~~yat~---------------~sppvaqq~~ssl~~i~G------------------------------------- 396 (519)
T KOG1357|consen 369 PSPSALYATS---------------LSPPVAQQILTSVKHIMG------------------------------------- 396 (519)
T ss_pred CCCceeeccc---------------CChHHHHHHHHHHHhhcC-------------------------------------
Confidence 1111111100 011100000000000001
Q ss_pred hhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCc
Q psy14299 269 ATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQ 348 (448)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~ 348 (448)
.-+..+-++..++..++++||+..++.. ||-++ +...
T Consensus 397 -----------------------------------------~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfivy-G~~d 433 (519)
T KOG1357|consen 397 -----------------------------------------EDGTNRGRQKIERLAENSRYFRWELQKM-GFIVY-GNND 433 (519)
T ss_pred -----------------------------------------CCcccHHHHHHHHHHhhhHHHHHhhhcC-cEEEe-cCCC
Confidence 1122334566777888899999999998 99988 7777
Q ss_pred eeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHH
Q psy14299 349 CTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQ 428 (448)
Q Consensus 349 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~a 428 (448)
++++.+.+.++... ..+.+.|+++.+.++..+.+-..-.....|++. +..+++|++|++++.
T Consensus 434 SpVvplll~~~~k~----------------~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~--Sa~ht~e~ld~~l~~ 495 (519)
T KOG1357|consen 434 SPVVPLLLYGPAKI----------------VAFSREMLERNIGVVVVGFPATPLLESRARFCL--SASHTKEDLDRALEV 495 (519)
T ss_pred CCcceeeecCcccc----------------cHHHHHHHhcCceEEEEeCCCchHHHhHHHhhh--cccccHHHHHHHHHH
Confidence 77777665543221 267778888765444332221111125789999 679999999999999
Q ss_pred HHHHHHH
Q psy14299 429 IELRGAE 435 (448)
Q Consensus 429 l~~~~~~ 435 (448)
+.++...
T Consensus 496 i~~~g~~ 502 (519)
T KOG1357|consen 496 IDRVGDE 502 (519)
T ss_pred Hhhhchh
Confidence 9988754
No 282
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.47 E-value=1.3e-11 Score=127.21 Aligned_cols=149 Identities=9% Similarity=0.036 Sum_probs=97.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCC--------cEEEEecCCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMD--------NVIRVKTNER 75 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~--------~v~~v~~~~~ 75 (448)
..++|+|+++++.+. ..+.. +++.|++...++..+...++..|.... +++.+|.+++
T Consensus 101 ~I~it~Ga~~al~~l-~~~~~--------------~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~ 165 (409)
T PRK07590 101 EIFISDGAKCDTGNI-LDIFG--------------PDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAE 165 (409)
T ss_pred hEEECCCHHHHHHHH-HHhcC--------------CCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccc
Confidence 367888888886553 22222 667788999999999999999887210 1778887644
Q ss_pred CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCC
Q psy14299 76 GQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGI 152 (448)
Q Consensus 76 g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~ 152 (448)
+.+.++ ++ + .++++|+++.++|+||.+.+ +++|.++|++||+++++|.+|+-....... ...+..+
T Consensus 166 ~~~~~d-~~----~-----~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~-~~~~~~~ 234 (409)
T PRK07590 166 NNFVPE-LP----E-----EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSL-PHSIYEI 234 (409)
T ss_pred cCCccc-Cc----c-----cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCC-CcchhhC
Confidence 333222 11 1 25789988999999998866 567888899999999999998854321110 0111111
Q ss_pred CC---ccEEEECCccccCCC-CceEEEEEe
Q psy14299 153 NR---ANSVSWNPHKMLGAP-LQCSILLIK 178 (448)
Q Consensus 153 ~~---aD~~~~s~hK~l~~P-~g~G~l~vr 178 (448)
.. .-+++.|+.|.++.| .-+|+++..
T Consensus 235 ~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~ 264 (409)
T PRK07590 235 EGARECAIEFRSFSKTAGFTGTRCAYTVVP 264 (409)
T ss_pred CCcccceEEEecCccccCCcCceeEEEEcC
Confidence 11 114466899998755 346666653
No 283
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.46 E-value=3e-11 Score=121.22 Aligned_cols=145 Identities=14% Similarity=0.030 Sum_probs=105.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++...+... +++.|+++...|..+...++..|. +++.++.++++.+|++.+
T Consensus 74 ~I~~t~G~~~~l~~~~~~~----------------~gd~V~v~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l 134 (337)
T PRK03967 74 NIAVGNGSDELISYLVKLF----------------EGKHIVITPPTFGMYSFYAKLNGI---PVIDVPLKEDFTIDGERI 134 (337)
T ss_pred eEEEcCCHHHHHHHHHHHh----------------CCCeEEEeCCChHHHHHHHHHcCC---eEEEeecCCCCCcCHHHH
Confidence 4678999999875544321 245688888888888888888888 788999887788999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++.+. +++++++++++|+||.+.+.++|.++++ +++++++|++|.-... ........... --+++.|+.
T Consensus 135 ~~~~~-------~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~--~~~~~~~~~~~-~vi~l~S~S 203 (337)
T PRK03967 135 AEKAK-------NASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSG--KSLIGLIDEYP-NLILLRTFS 203 (337)
T ss_pred HHhcc-------CCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhcc--cchHHHHhhCC-CEEEEecch
Confidence 87642 3568888999999999999999999995 7999999999874321 11111111111 125567899
Q ss_pred cccCCC-CceEEEEEe
Q psy14299 164 KMLGAP-LQCSILLIK 178 (448)
Q Consensus 164 K~l~~P-~g~G~l~vr 178 (448)
|.++.| .-+|+++..
T Consensus 204 K~~~l~GlRiG~iv~~ 219 (337)
T PRK03967 204 KAFGLAGIRAGYAIAN 219 (337)
T ss_pred HhhcchhhhheeeecC
Confidence 998755 456776663
No 284
>KOG0630|consensus
Probab=99.45 E-value=1.9e-12 Score=128.92 Aligned_cols=374 Identities=18% Similarity=0.227 Sum_probs=227.7
Q ss_pred CCeEEEecCCCchHH-HHHHHHhCCCCCcEEEEe-cCC---CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccccc
Q psy14299 39 PPLCMFTSEDSHYSM-LKAAHWLGIGMDNVIRVK-TNE---RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFD 113 (448)
Q Consensus 39 ~~~~Vl~~~~~H~s~-~~~~~~~g~~~~~v~~v~-~~~---~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~ 113 (448)
....+|+++..|... ..+|+.+|+.-..+..++ ++. .|+||.-.+++.|+++...+++|.+++..-+.+..|..+
T Consensus 230 aaPt~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnD 309 (838)
T KOG0630|consen 230 AAPTFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQND 309 (838)
T ss_pred cCceEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchH
Confidence 345799999999875 467888998543333333 222 359999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcC-CEEEEecccccccccccc-hhhhhcCCCCccEEEECCccccCCCCceEEEEEeccchhhhhccCCc
Q psy14299 114 PLDEIATVCEKYD-LWMHVDACWGGSLIFSEK-YSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAA 191 (448)
Q Consensus 114 ~l~~I~~ia~~~g-~~l~VD~A~~~~~~~~~~-~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~ 191 (448)
.|-+|.++|++|. .|+|.-| |+..++.+.+ ......-.+..|+++++..-|||.|...-+++-|.-+ .. ..
T Consensus 310 mi~kildi~eahakfWLHasG-haiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPle--g~----aa 382 (838)
T KOG0630|consen 310 MILKILDICEAHAKFWLHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLE--GS----AA 382 (838)
T ss_pred HHHHHHHHHHHhhheeEeecc-chhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeecccc--cc----cc
Confidence 9999999999997 9999987 3333332221 1111111234799999999999999876666554321 10 01
Q ss_pred ccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhhhhccCCCccch-----------------
Q psy14299 192 TYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRGSMTFST----------------- 254 (448)
Q Consensus 192 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~----------------- 254 (448)
+-+. ......++..++++|.+++++|.+.+..+|+..+.+|+-.-...+
T Consensus 383 Safe--------------sdpi~rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig~dn~aela 448 (838)
T KOG0630|consen 383 SAFE--------------SDPILREKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIGHDNGAELA 448 (838)
T ss_pred hhcc--------------cChHHHHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEeccCCHHHHH
Confidence 1010 012345678899999999999999999999988876543211100
Q ss_pred -h------hhhhhhhhhhhhhhhhhhhhhc----------------------------------cccccccccCCCCCcc
Q psy14299 255 -L------LCFDLQGLLHQANATAATYLFQ----------------------------------QDKFYDVSFDTGDKSV 293 (448)
Q Consensus 255 -~------~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~ 293 (448)
. .-||.|-+.++|.-+-+ |-|. .-.|.|..+.|.+..+
T Consensus 449 arl~dn~~sPfdvqalfdaaaPtVa-i~~~~~tsIk~a~q~hkaaaaaaddedA~aiaeke~~deaeY~D~LNaWL~d~L 527 (838)
T KOG0630|consen 449 ARLSDNIFSPFDVQALFDAAAPTVA-IFFDGSTSIKLAGQGHKAAAAAADDEDAEAIAEKEKIDEAEYFDRLNAWLGDGL 527 (838)
T ss_pred HHHhhccCCcchHhhhhcccCCeEE-EEecCceeeeccccccHHHHhhccccchhhcchhhhcchHHHHHHHHHHHhccc
Confidence 0 22444555444433322 1111 1144566666666555
Q ss_pred --cccc-chhhHHHH----HHHHHhcCcc-----------HHHHHHHHHHHHHHHHHHhh----------cCCCeEEecc
Q psy14299 294 --QCGR-KVDAFKLW----LMWKARGNLG-----------FRHFVDNAVDCSRYFLSQIS----------QRPGFRLVIP 345 (448)
Q Consensus 294 --~~~~-~~~~~~~~----~~~~~~~~~G-----------~~~~~~~~~~l~~~~~~~L~----------~~pg~~l~~~ 345 (448)
.|.+ ..+.+... .+++++..+- ++..........+.++..+. ..|-++++.-
T Consensus 528 lpd~~~f~fdtIE~~gn~GiafRfCPLEhgaae~pphidhlerFaqkLea~m~IleaTi~hKakF~eLkd~~~sL~LlPi 607 (838)
T KOG0630|consen 528 LPDCLNFDFDTIEHGGNHGIAFRFCPLEHGAAEQPPHIDHLERFAQKLEAHMDILEATIKHKAKFIELKDCFDSLRLLPI 607 (838)
T ss_pred ccCCCCCCceeeecCCccceeEEecccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcccceEEeec
Confidence 3444 22222221 3444443222 23333333333333332222 2234555522
Q ss_pred CCceeeEEEEeeccCCCcc---ccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee-cCCcccccEEEEEecCCCCCCHHH
Q psy14299 346 EFQCTNICFWFIPVSLRDK---VEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP-LQHRNLHNFFRLVTTCHPASSRQD 421 (448)
Q Consensus 346 ~~~~~~v~f~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~-~~g~~~~~~lRis~~~~~~~t~ed 421 (448)
+...++..+++.|.-++.. ...+....++++++.++++.|......|..+.. ..|. -|+||++. +.+.|
T Consensus 608 ~eWAGiGaV~fiPsivkE~~~e~~nDiaKqeinhLNidLVeaLKStDaAFS~Gd~Tr~Gl---~CVkFGMl----sd~kd 680 (838)
T KOG0630|consen 608 PEWAGIGAVCFIPSIVKEGNEEDLNDIAKQEINHLNIDLVEALKSTDAAFSLGDCTRDGL---ICVKFGML----SDEKD 680 (838)
T ss_pred cccccccceEecccccccCCHhHhhHHHHHHHhhccHHHHHHHhhhhhhcccCCccccce---eEEEeccc----cchhh
Confidence 3344565666666322211 112334456788888999999887755543332 2444 79999984 57889
Q ss_pred HHHHHHHHHHHHHHhHHhhh
Q psy14299 422 MDYAIDQIELRGAEVDLEMQ 441 (448)
Q Consensus 422 id~l~~al~~~~~~~~~~~~ 441 (448)
++.|++.+...+++++.+++
T Consensus 681 leeLldlVaqkGKeieenqq 700 (838)
T KOG0630|consen 681 LEELLDLVAQKGKEIEENQQ 700 (838)
T ss_pred HHHHHHHHHHhchhhhhHHH
Confidence 99999999888887766554
No 285
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.44 E-value=6.7e-11 Score=119.53 Aligned_cols=150 Identities=15% Similarity=0.107 Sum_probs=102.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|+++++.+++.+..+ +++.|+++...+..+...++..|. .++.++.+. +..+|.+
T Consensus 84 ~I~it~G~~~al~~~~~~~~~--------------~gd~V~v~~P~y~~~~~~~~~~g~---~~~~~~l~~~~~~~~~~~ 146 (357)
T PRK14809 84 QVWLANGGDGALDYLARAMLD--------------PGDTVLVPDPGFAYYGMSARYHHG---EVREYPVSKADDFEQTAD 146 (357)
T ss_pred eEEECCCHHHHHHHHHHHhcC--------------CCCEEEEeCCChHHHHHHHHHcCC---eEEEEecccCcCCCcCHH
Confidence 467899999998777665543 567788888887777777777787 677787753 4567777
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc--CCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY--DLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~--g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++... ++++|+++.++|+||...+.+++.++++.. ++++++|++|......... .......+ -=+++
T Consensus 147 ~~~~~~~-------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~-~~~~~~~~-~vi~~ 217 (357)
T PRK14809 147 TVLDAYD-------GERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSA-VALVEERD-DVAVL 217 (357)
T ss_pred HHHHhhc-------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchh-HHHHhhCC-CEEEE
Confidence 7766542 367899999999999999988877777654 7899999998754321110 01111100 11455
Q ss_pred ECCccccCCC-CceEEEEEec
Q psy14299 160 WNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 160 ~s~hK~l~~P-~g~G~l~vr~ 179 (448)
.++.|.++.| .-+|+++..+
T Consensus 218 ~SfSK~~~~~GlRiG~~~~~~ 238 (357)
T PRK14809 218 RTFSKAYGLAGLRLGYAVVPE 238 (357)
T ss_pred ecchhHhcCcchhheeeecCH
Confidence 6889998755 4467766643
No 286
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.44 E-value=4.3e-11 Score=123.12 Aligned_cols=157 Identities=17% Similarity=0.114 Sum_probs=95.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.++|+++|++||..|+..+|.... ..+.+ ....+|......|-+...+....+... ..+..+|.+
T Consensus 98 ~v~~~~sGseA~e~Alk~ar~~~~----~~~~~-~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 171 (406)
T PRK12381 98 RVFFCNSGAEANEAALKLARKYAH----DRYGS-HKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYN- 171 (406)
T ss_pred eEEEcCCcHHHHHHHHHHHHHHHh----hcCCC-CCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCC-
Confidence 579999999999999999886521 01111 123456666777877665555444210 012333332
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccc----ccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhc
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA----FDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~----~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
|++++++.+.+ ++.+|++.-.....|. ..++++|.++|++||+++++|++|.+.......+.....
T Consensus 172 ----d~~~l~~~l~~------~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~ 241 (406)
T PRK12381 172 ----DLNSASALIDD------QTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHY 241 (406)
T ss_pred ----CHHHHHHhccC------CeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhh
Confidence 78999988853 4667777644443443 466899999999999999999998543111111111112
Q ss_pred CCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 151 GINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
++ ..|.+ +..|.+++-..+|.+..++
T Consensus 242 ~v-~pDi~--t~sK~l~gG~~ig~~~~~~ 267 (406)
T PRK12381 242 GV-TPDVL--TTAKALGGGFPIGAMLTTE 267 (406)
T ss_pred CC-CCCEE--EehhhhhCCCceEEEEEcH
Confidence 33 25764 5579886444577776654
No 287
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.43 E-value=4.7e-11 Score=122.69 Aligned_cols=151 Identities=9% Similarity=0.014 Sum_probs=97.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCC--------cEEEEecCCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMD--------NVIRVKTNER 75 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~--------~v~~v~~~~~ 75 (448)
..++|+|+++++... ..... +++.|+++...+..+...++..|.... ++..++.++.
T Consensus 97 ~I~it~Ga~~al~~l-~~l~~--------------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~ 161 (402)
T TIGR03542 97 EIFISDGAKCDVFRL-QSLFG--------------SDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKE 161 (402)
T ss_pred HEEECCCcHHHHHHH-HHhcC--------------CCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchh
Confidence 367889999987653 22222 456788888899999999988887111 3566776543
Q ss_pred CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCC
Q psy14299 76 GQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGI 152 (448)
Q Consensus 76 g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~ 152 (448)
+.++++ +++ ..++++|+++.++|+||.+.+ +++|.++|++||+++++|++|.-.... +.....+..+
T Consensus 162 ~~~~~~-~~~--------~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~-~~~~~~~~~~ 231 (402)
T TIGR03542 162 NNFIPD-LPE--------EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISD-PSLPHSIFEI 231 (402)
T ss_pred hCCCCC-ccc--------cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccC-CCCCcchhhC
Confidence 323322 111 125789999999999999877 888999999999999999998854321 1101111111
Q ss_pred CC---ccEEEECCccccCCC-CceEEEEEec
Q psy14299 153 NR---ANSVSWNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 153 ~~---aD~~~~s~hK~l~~P-~g~G~l~vr~ 179 (448)
.. .-+++.|+.|.++.| .-+|+++..+
T Consensus 232 ~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~ 262 (402)
T TIGR03542 232 PGAKECAIEFRSFSKTAGFTGVRLGWTVVPK 262 (402)
T ss_pred CCCcccEEEEecCccccCCCCcceEEEEecH
Confidence 11 124467889988755 4467766633
No 288
>PRK08637 hypothetical protein; Provisional
Probab=99.42 E-value=7.7e-11 Score=120.52 Aligned_cols=155 Identities=11% Similarity=-0.012 Sum_probs=103.3
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH-HHhCCCCCcEEEEecC-CCCCcCHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA-HWLGIGMDNVIRVKTN-ERGQMICSF 82 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~-~~~g~~~~~v~~v~~~-~~g~id~e~ 82 (448)
.++|+|+++++.+.+.+..+ +++.|+++...+..+.... ...|. +++.+|.. +++.+|+++
T Consensus 72 I~it~G~~~al~~~~~~l~~--------------~gd~Vlv~~P~y~~~~~~~~~~~g~---~vv~v~~~~~~~~~d~~~ 134 (388)
T PRK08637 72 PIVTNALTHGLSLVADLFVD--------------QGDTVLLPDHNWGNYKLTFNTRRGA---EIVTYPIFDEDGGFDTDA 134 (388)
T ss_pred eeEccchHHHHHHHHHHhcC--------------CCCEEEEcCCCCccHHHHHHHhcCC---EEEEecccCCCCcCCHHH
Confidence 57899999998777665543 5677888988888888764 45677 78888873 556789999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHH-----cCCEEEEecccccccccccchhh---hhcC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEK-----YDLWMHVDACWGGSLIFSEKYSF---VLKG 151 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~-----~g~~l~VD~A~~~~~~~~~~~~~---~~~~ 151 (448)
+++.++.. ......+++++.++|+||...+ +++|+++|++ |++++++|.+|............ .+.+
T Consensus 135 l~~~~~~~--~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~ 212 (388)
T PRK08637 135 LKEALQAA--YNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALAN 212 (388)
T ss_pred HHHHHHhh--ccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhc
Confidence 99998721 1123456778889999997755 5667777765 89999999998755432111100 0111
Q ss_pred C-CCccEEE-ECCccccCCCC-ceEEEEEe
Q psy14299 152 I-NRANSVS-WNPHKMLGAPL-QCSILLIK 178 (448)
Q Consensus 152 ~-~~aD~~~-~s~hK~l~~P~-g~G~l~vr 178 (448)
. +.+-.+. .++.|.++.|. -+|++++.
T Consensus 213 ~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~ 242 (388)
T PRK08637 213 LHSNILAVKLDGATKEEFVWGFRVGFITFG 242 (388)
T ss_pred ccccceEEEeccccccCCCcccceEEEEEc
Confidence 1 1121222 38889766553 37777654
No 289
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.42 E-value=1.8e-10 Score=119.53 Aligned_cols=162 Identities=14% Similarity=0.057 Sum_probs=100.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC--------C--CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI--------G--MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~--------~--~~~v~~v~~~ 73 (448)
.++|+++||+||..|+..||... ....+|......|-+...+....+- . ...+..+|.+
T Consensus 105 ~v~f~~SGseA~e~AlklAr~~t-----------gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (433)
T PRK08117 105 CFFFSNSGAEAIEGALKLAKHVT-----------KRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYP 173 (433)
T ss_pred EEEEeCcHHHHHHHHHHHHHHhc-----------CCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCC
Confidence 46899999999999999988742 1334566667778776655443321 0 0113344433
Q ss_pred CCCC------------cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccc
Q psy14299 74 ERGQ------------MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGG 137 (448)
Q Consensus 74 ~~g~------------id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~ 137 (448)
...+ -|++++++.+++.. .+..+.+|++.-...+.|.+.| +++|.++|++||+++++|.+|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG 252 (433)
T PRK08117 174 YCDRCPKGEDPEVCFLECLRDLESLFKHQV-TPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTG 252 (433)
T ss_pred ccccccccCchhHHHHHHHHHHHHHHHhcc-CCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhc
Confidence 2111 15666777775311 1235667888878788898888 99999999999999999999885
Q ss_pred ccccccchhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 138 SLIFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 138 ~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
.-.....+.....++ ..|+ .+..|.+++-..+|.+..+++
T Consensus 253 ~gr~G~~~~~~~~gv-~pDi--~t~sK~lg~G~pigav~~~~~ 292 (433)
T PRK08117 253 FGRTGEWFAAQTFGV-VPDI--MTIAKGIASGLPLSAVVASKE 292 (433)
T ss_pred cCccccchhHhhcCC-CCCE--eehhhhccCCCcceeEEEcHH
Confidence 211111111011122 2465 466898874344777766543
No 290
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.42 E-value=2.6e-10 Score=118.12 Aligned_cols=161 Identities=14% Similarity=0.113 Sum_probs=100.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
.++|+++|||||-.|+..||.... ..| ...+|......|-...-+....+-. ...+..+|.+
T Consensus 136 ~v~f~~SGsEA~e~AlklAr~~t~----~~g----r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~- 206 (442)
T TIGR03372 136 YSFFCNSGTESVEAALKLAKAYQS----PRG----KFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFG- 206 (442)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHh----hcC----CcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCC-
Confidence 378999999999999999987521 011 2234555555665544444332210 0113344433
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccchhhhhc
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
|.+.+++.+++....+..+.+|++.-.....|.+.| +++|.++|++||+.+++|++|.+.--...-+.....
T Consensus 207 ----d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~ 282 (442)
T TIGR03372 207 ----DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHE 282 (442)
T ss_pred ----CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhc
Confidence 778888888653333345677888877777888888 999999999999999999998542111111111112
Q ss_pred CCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 151 GINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
++ ..|+++ ..|.+++- ..+|.++.+++
T Consensus 283 gv-~PDivt--~gK~lg~G~~Pigavv~~~~ 310 (442)
T TIGR03372 283 GV-QPDILC--LAKALGGGVMPIGATIATEA 310 (442)
T ss_pred CC-CCCeee--ehhhhcCCcccceEEEecHH
Confidence 33 368776 58988753 24677666543
No 291
>PLN02368 alanine transaminase
Probab=99.41 E-value=3.8e-11 Score=123.38 Aligned_cols=121 Identities=14% Similarity=0.043 Sum_probs=98.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|+++++..++.+.... +++.|+++...+..+...++..|. +++.++.++ ++.+|++
T Consensus 132 ~I~it~Ga~~al~~~~~~l~~~-------------pGd~Vli~~P~Y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~ 195 (407)
T PLN02368 132 LIFLTDGASKGVMQILNAVIRG-------------EKDGVLVPVPQYPLYSATISLLGG---TLVPYYLEESENWGLDVN 195 (407)
T ss_pred hEEEcccHHHHHHHHHHHHcCC-------------CCCEEEEeCCCCccHHHHHHHcCC---EEEEEecccccCCCCCHH
Confidence 5789999999988877765432 677899999999999999999998 788888865 3689999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLI 140 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~ 140 (448)
+|++.+++...++.++++++++.++|+||.+.+ +++|.++|++||++++.|.+|.-..+
T Consensus 196 ~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y 257 (407)
T PLN02368 196 NLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIY 257 (407)
T ss_pred HHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcccccccc
Confidence 999999753333336889999999999998866 66778889999999999999876543
No 292
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.41 E-value=1.4e-10 Score=119.53 Aligned_cols=155 Identities=14% Similarity=0.065 Sum_probs=93.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEe-cCCCchHHHHHHHHhCC-CCCcEEEEecCC---CCCc
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFT-SEDSHYSMLKAAHWLGI-GMDNVIRVKTNE---RGQM 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~-~~~~H~s~~~~~~~~g~-~~~~v~~v~~~~---~g~i 78 (448)
..++|+|+++++.+++.+...... ..+++.|++ ...+++.+...+...+. .......++.+. +..+
T Consensus 99 ~I~it~Ga~~al~~~~~~l~~~~~---------~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (416)
T PRK09440 99 NIALTNGSQSAFFYLFNLFAGRRA---------DGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHV 169 (416)
T ss_pred hEEEccChHHHHHHHHHHHhcccc---------CCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCC
Confidence 467899999998777766554200 014566777 46677666665543332 000122233333 2578
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCc
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRA 155 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~a 155 (448)
|+++|+ +. .++++++++.++|+||.+.+ +++|+++|++||+++++|.+|+-..... ...........-
T Consensus 170 d~~~l~--~~------~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~~~~~~~~~~ 240 (416)
T PRK09440 170 DFEHLH--ID------EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IFSEATPLWNPN 240 (416)
T ss_pred CHHHcc--cC------CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-chhhcCccccCC
Confidence 999987 21 24689999999999998877 6788889999999999999996321100 000000000001
Q ss_pred cEEEECCccccCCC-CceEEEEE
Q psy14299 156 NSVSWNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 156 D~~~~s~hK~l~~P-~g~G~l~v 177 (448)
=+++.|+.|. +.| .-+|+++.
T Consensus 241 vI~~~SfSK~-~~pGlRiG~~i~ 262 (416)
T PRK09440 241 IILCMSLSKL-GLPGVRCGIVIA 262 (416)
T ss_pred eEEEeccccc-CCCcceEEEEeC
Confidence 1556788996 444 33565554
No 293
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.40 E-value=3.3e-10 Score=116.12 Aligned_cols=155 Identities=13% Similarity=0.032 Sum_probs=110.7
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec-C-CCCCcCHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT-N-ERGQMICSF 82 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~-~-~~g~id~e~ 82 (448)
+++|+|+++++.+++.....- .+++.|++++..+..+...++..|. +++.+|. + +++.+|++.
T Consensus 97 v~iT~Ga~~al~~~~~~l~~~------------~pGd~Vlv~~P~y~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~ 161 (396)
T PRK09257 97 TVQTPGGTGALRVGADFLKRA------------FPDAKVWVSDPTWPNHRAIFEAAGL---EVKTYPYYDAATKGLDFDA 161 (396)
T ss_pred EEecCCccHHHHHHHHHHHHh------------CCCCeEEECCCCcccHHHHHHHcCC---cEEEEeccccccCccCHHH
Confidence 489999999988887544321 1677899999999999999999999 7888987 2 357899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccc-hhh--hhcCCCCcc
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEK-YSF--VLKGINRAN 156 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~-~~~--~~~~~~~aD 156 (448)
+++.+++. ..+.+++++..++|+||...+ +++|+++|++||++++.|.+|......... ... .+.+...-=
T Consensus 162 l~~~~~~~---~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~v 238 (396)
T PRK09257 162 MLADLSQA---PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLEL 238 (396)
T ss_pred HHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcE
Confidence 99988642 123467777999999998755 677888999999999999998754321110 111 011111112
Q ss_pred EEEECCccccCCC-CceEEEEE
Q psy14299 157 SVSWNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 157 ~~~~s~hK~l~~P-~g~G~l~v 177 (448)
+++.|+.|.++.| .-+|++++
T Consensus 239 i~i~SfSK~~~~~GlRiG~~~~ 260 (396)
T PRK09257 239 LVASSFSKNFGLYGERVGALSV 260 (396)
T ss_pred EEEEEcCCcCccccccceeEEE
Confidence 5678999998753 45676653
No 294
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.40 E-value=1e-10 Score=117.21 Aligned_cols=145 Identities=12% Similarity=-0.007 Sum_probs=102.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++..++.+. . .|++...++..+...++..|. +++.+|.++++.++...
T Consensus 78 ~i~it~Ga~~~i~~~~~~~-d-----------------~v~v~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~- 135 (335)
T PRK14808 78 NVSVGNGADEIIYVMMLMF-D-----------------RSVFFPPTYSCYRIFAKAVGA---KFLEVPLTKDLRIPEVN- 135 (335)
T ss_pred eEEEcCCHHHHHHHHHHHh-C-----------------cEEECCCCHHHHHHHHHHcCC---eEEEecCCCcCCCChhH-
Confidence 4788999999988776543 1 267788999999999999999 78999988777665332
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
+. ++++++++.++|+||...+.+++.+++ ++++++++|.+|.-..- ......+.... -=+++.|+.
T Consensus 136 ---~~-------~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~--~~~~~~~~~~~-~vi~~~S~S 201 (335)
T PRK14808 136 ---VG-------EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHG--ESYVDLLKKYE-NLAVIRTFS 201 (335)
T ss_pred ---cc-------CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcC--CchHHHHHhCC-CEEEEEech
Confidence 21 357899999999999999999999998 58999999999874311 11111111111 125567889
Q ss_pred cccCCC-CceEEEEEeccchhhh
Q psy14299 164 KMLGAP-LQCSILLIKEKGLLHQ 185 (448)
Q Consensus 164 K~l~~P-~g~G~l~vr~~~~~~~ 185 (448)
|.++.| .-+|+++..+ ++...
T Consensus 202 K~~~l~GlRvG~~v~~~-~~~~~ 223 (335)
T PRK14808 202 KAFSLAAQRIGYVVSSE-KFIDA 223 (335)
T ss_pred hhccCcccceEEEEeCH-HHHHH
Confidence 998854 3467766543 44433
No 295
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.40 E-value=3e-10 Score=115.94 Aligned_cols=298 Identities=16% Similarity=0.164 Sum_probs=184.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC----------CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG----------MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~----------~~~v~~v~~~ 73 (448)
..+|+++||+||=.|+..||..-. ...+|-....-|-....+..+.+.. ...+..+|.+
T Consensus 119 ~~~f~~sGaeA~E~AiKiAr~~Tg-----------r~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp 187 (447)
T COG0160 119 KVFFGNSGAEAVEAAIKIARAYTG-----------RPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYP 187 (447)
T ss_pred eEEecCCcHHHHHHHHHHHHHHhC-----------CCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCC
Confidence 478999999999999999998631 2345666777887777666665431 1126677765
Q ss_pred CCC------------CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccc
Q psy14299 74 ERG------------QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGG 137 (448)
Q Consensus 74 ~~g------------~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~ 137 (448)
... .-..+.+++.+.+....+..+.++++.-.....|.+.| ++++.++|++||+++++|..|.+
T Consensus 188 ~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG 267 (447)
T COG0160 188 NPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTG 267 (447)
T ss_pred ccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 322 12345566766655445557888999888888888766 89999999999999999999887
Q ss_pred ccccccchhhhhcCCCCccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCC
Q psy14299 138 SLIFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRK 217 (448)
Q Consensus 138 ~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 217 (448)
.--...-|...-.++ ..|++++ .|.+++-...|.+..|.+ +.. ..+....+.+ .+.+
T Consensus 268 ~GRTG~~fa~E~~gv-~PDivt~--aK~ig~G~Pl~avv~r~e-i~~-~~~g~~~~Tf------------------~GNp 324 (447)
T COG0160 268 FGRTGKMFAFEHFGV-EPDIVTL--AKSLGGGLPLSAVVGRAE-IMD-WPPGGHGGTF------------------GGNP 324 (447)
T ss_pred CCccccchhhhhcCC-CCCEEEe--cccccCCCceeEEeccHH-hcc-cCCcccCCCC------------------CcCH
Confidence 543332233223344 4788886 688877666777777554 322 1111111110 1111
Q ss_pred chhHHHHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcccccc
Q psy14299 218 VDAFKLWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGR 297 (448)
Q Consensus 218 ~~~~~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (448)
T Consensus 325 -------------------------------------------------------------------------------- 324 (447)
T COG0160 325 -------------------------------------------------------------------------------- 324 (447)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCC-CeEEeccCCc--eeeEEEEee-ccCCCccccchhhhhh
Q psy14299 298 KVDAFKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRP-GFRLVIPEFQ--CTNICFWFI-PVSLRDKVEDETWWST 373 (448)
Q Consensus 298 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~p-g~~l~~~~~~--~~~v~f~~~-~~~~~~~~~~~~~~~~ 373 (448)
+.+.+....|+.+.++ .+.++..++.+|++++|.++. .+.++ .+.+ .-.+.+.+. +.+-+ ..+
T Consensus 325 -va~Aaa~AvL~vie~e---~L~~~a~~~G~~l~~~L~~l~~~~~~I-gdVRG~Glm~giE~v~d~~t~--~p~------ 391 (447)
T COG0160 325 -VACAAALAVLDVIEEE---NLLERAAELGEYLRDRLEELQEKHPLI-GDVRGLGLMIGVELVKDRDTK--EPD------ 391 (447)
T ss_pred -HHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHhhcCce-ecccccceEEEEEEecCCCCC--CCC------
Confidence 1122222334433444 355666777888888877652 23344 3333 223333332 11111 000
Q ss_pred hhhhhHHHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 374 LSKVAPRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 374 ~~~~~~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
......+.+.+.++|.++...+ ..+ +.+||.+ -...+++++|..+++|++..++.
T Consensus 392 -~~~~~~i~~~~~~~Glil~~~G-~~~----nviRi~P--PL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 392 -AELAAKIVARAFERGLLLLTCG-PHG----NVLRILP--PLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred -HHHHHHHHHHHHHcCCEEeccC-CCC----cEEEEeC--CcccCHHHHHHHHHHHHHHHHhh
Confidence 1245689999999996554433 223 6999999 68899999999999999988753
No 296
>PRK08354 putative aminotransferase; Provisional
Probab=99.40 E-value=1.3e-10 Score=115.16 Aligned_cols=137 Identities=12% Similarity=0.029 Sum_probs=99.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++.+.+.. .. +++.|+++...+..+...++..|. ++..++ +|++.+
T Consensus 56 ~I~vt~G~~~al~~~~~~-~~--------------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~~~------~d~~~l 111 (311)
T PRK08354 56 PIVITAGITEALYLIGIL-AL--------------RDRKVIIPRHTYGEYERVARFFAA---RIIKGP------NDPEKL 111 (311)
T ss_pred CEEECCCHHHHHHHHHHh-hC--------------CCCeEEEeCCCcHHHHHHHHHcCC---EEeecC------CCHHHH
Confidence 578999999997655432 22 456788999999999999999998 665543 588888
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
++.+++ ++.++++.++|+||.+.+ +++|.++|+++|+++++|+++........ .. . ..--+++.
T Consensus 112 ~~~~~~-------~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~--~~--~--~~~vi~~~ 178 (311)
T PRK08354 112 EELVER-------NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPE--SP--E--GENIIKLR 178 (311)
T ss_pred HHhhcC-------CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhcccccc--cc--C--CCcEEEEe
Confidence 887642 457888999999998866 56677888999999999999975443111 00 0 01135667
Q ss_pred CCccccCCC-CceEEEEE
Q psy14299 161 NPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 161 s~hK~l~~P-~g~G~l~v 177 (448)
|+.|.++.| .-+|+++.
T Consensus 179 S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 179 TFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred ccHhhcCCccceeeeeee
Confidence 889998865 33566554
No 297
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.40 E-value=2.1e-10 Score=116.61 Aligned_cols=141 Identities=14% Similarity=0.141 Sum_probs=103.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH----HhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH----WLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~----~~g~~~~~v~~v~~~~~g~id 79 (448)
.++.+++|.-|+..++....+ +++.|+++...+......++ ..|+ ++..++.. |
T Consensus 72 ~a~~~~SGmaAi~~~l~~ll~--------------~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv---~v~~~d~~-----d 129 (386)
T PF01053_consen 72 DALLFSSGMAAISAALLALLK--------------PGDHIVASDDLYGGTYRLLEELLPRFGV---EVTFVDPT-----D 129 (386)
T ss_dssp EEEEESSHHHHHHHHHHHHS---------------TTBEEEEESSSSHHHHHHHHHCHHHTTS---EEEEESTT-----S
T ss_pred ceeeccchHHHHHHHHHhhcc--------------cCCceEecCCccCcchhhhhhhhcccCc---EEEEeCch-----h
Confidence 467788998888777776544 56677778777766555544 3466 67777654 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcC-CEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYD-LWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g-~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
++++++++++ ++++|.+..++|++..+.||++|+++||++| ++++||.+++.....-+ ... ++|++
T Consensus 130 ~~~l~~~l~~------~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~p-L~~------GaDiv 196 (386)
T PF01053_consen 130 LEALEAALRP------NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQNP-LEL------GADIV 196 (386)
T ss_dssp HHHHHHHHCT------TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC-G-GGG------T-SEE
T ss_pred HHHHHhhccc------cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeeecc-CcC------CceEE
Confidence 9999999976 5899999999999999999999999999999 99999999887644221 111 48999
Q ss_pred EECCccccCCCCc--eEEEEEec
Q psy14299 159 SWNPHKMLGAPLQ--CSILLIKE 179 (448)
Q Consensus 159 ~~s~hK~l~~P~g--~G~l~vr~ 179 (448)
+.|..|.+++... .|++.+++
T Consensus 197 v~S~TKyl~Ghsdv~~G~vv~~~ 219 (386)
T PF01053_consen 197 VHSATKYLSGHSDVMGGAVVVNG 219 (386)
T ss_dssp EEETTTTTTTSSSE-EEEEEESS
T ss_pred EeeccccccCCcceeeEEEEECc
Confidence 9999999987653 45555555
No 298
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.40 E-value=2.9e-10 Score=117.70 Aligned_cols=162 Identities=22% Similarity=0.207 Sum_probs=95.9
Q ss_pred EEE-eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC---------CCCcEEEEecCC
Q psy14299 5 PFL-LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI---------GMDNVIRVKTNE 74 (448)
Q Consensus 5 g~~-t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~---------~~~~v~~v~~~~ 74 (448)
.+| +++||+||-.|+..||..- | ...+|......|-...-+....+- ....+..+|.+.
T Consensus 105 ~~f~~~sGseA~e~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~ 173 (425)
T PRK09264 105 VQFTGPTGTNAVEAALKLARKVT-------G----RTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDG 173 (425)
T ss_pred EEEeCCCHHHHHHHHHHHHHHhc-------C----CCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCC
Confidence 446 5899999999999998751 1 223444455556544433333221 111345555432
Q ss_pred CC---CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccccc----CHHHHHHHHHHcCCEEEEecccccccccccchhh
Q psy14299 75 RG---QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFD----PLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF 147 (448)
Q Consensus 75 ~g---~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~----~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~ 147 (448)
.. .-|++++++.+++.......+.+|++.-.....|.+. .+++|.++|++||+++++|+.|.+.-.....+..
T Consensus 174 ~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~ 253 (425)
T PRK09264 174 YFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSF 253 (425)
T ss_pred ccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHH
Confidence 11 1267888888865321112456777777777667543 5999999999999999999998742111111111
Q ss_pred hhcCCCCccEEEECCccccCC-CCceEEEEEecc
Q psy14299 148 VLKGINRANSVSWNPHKMLGA-PLQCSILLIKEK 180 (448)
Q Consensus 148 ~~~~~~~aD~~~~s~hK~l~~-P~g~G~l~vr~~ 180 (448)
...++ ..|++++ .|.++. -..+|+++++++
T Consensus 254 ~~~~v-~PDi~t~--~K~l~~~G~pigav~~~~~ 284 (425)
T PRK09264 254 ERAGI-TPDIVTL--SKSISGYGLPMALVLIKPE 284 (425)
T ss_pred hhcCC-CCCEEEe--ccccCCCccceEEEEEchh
Confidence 11223 3687776 498864 234688877654
No 299
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.39 E-value=2.1e-10 Score=114.70 Aligned_cols=141 Identities=13% Similarity=0.036 Sum_probs=96.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++.+.+. - .+++.|+++...+..+...++..|. +++.+|.+ ++
T Consensus 66 ~I~it~Gs~~al~~~~~---~-------------~~gd~v~v~~P~y~~~~~~~~~~g~---~~~~v~~~--------~~ 118 (330)
T PRK05664 66 QLLPVAGSQAAIQALPR---L-------------RAPGRVGVLSPCYAEHAHAWRRAGH---QVRELDEA--------EV 118 (330)
T ss_pred CEEECcCHHHHHHHHHH---c-------------cCCCEEEEcCCChHHHHHHHHHcCC---eEEEechh--------hH
Confidence 46789999999766532 1 1567799999999999999999999 78777653 45
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCc-c-EE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRA-N-SV 158 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~a-D-~~ 158 (448)
++.++ ++++++++.++|+||.+.+ +++|.++|+++|+++++|.+|....- .+. +..+..- . ++
T Consensus 119 ~~~~~-------~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~-~~s----~~~~~~~~~vi~ 186 (330)
T PRK05664 119 EAALD-------SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTP-QHS----LAACAHRPGLIV 186 (330)
T ss_pred hhhhc-------CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCC-ccc----ccccccCCCEEE
Confidence 55553 3568888999999998877 55566667899999999999864321 111 1111111 1 66
Q ss_pred EECCccccCCC-CceEEEEEeccchhh
Q psy14299 159 SWNPHKMLGAP-LQCSILLIKEKGLLH 184 (448)
Q Consensus 159 ~~s~hK~l~~P-~g~G~l~vr~~~~~~ 184 (448)
+.|+.|.++.| .-+|+++. ++++..
T Consensus 187 ~~SfSK~~gl~GlRiG~~v~-~~~l~~ 212 (330)
T PRK05664 187 LRSFGKFFGLAGARLGFVLA-EPALLR 212 (330)
T ss_pred EeeccccccCCCcceEEEEe-CHHHHH
Confidence 77899998755 44676665 334433
No 300
>KOG2040|consensus
Probab=99.39 E-value=5.2e-11 Score=122.18 Aligned_cols=279 Identities=13% Similarity=0.125 Sum_probs=174.7
Q ss_pred CCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC-HHH
Q psy14299 39 PPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP-LDE 117 (448)
Q Consensus 39 ~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~-l~~ 117 (448)
+..+.+++-.+|-..-..+.+.|+ +++.|.++.+|.+|+.+|+...++..+ .-..++++.++| .|++.+ |++
T Consensus 629 hRnvClIPvSAHGTNPASA~Magm---kvvpV~~~~~G~id~~dLk~kaekh~~---~Laa~MvTYPST-~GvfE~~i~d 701 (1001)
T KOG2040|consen 629 HRNVCLIPVSAHGTNPASAAMAGM---KVVPVGCDANGNIDMVDLKAKAEKHKD---NLAALMVTYPST-HGVFEEGIDD 701 (1001)
T ss_pred cceeEEEeecccCCChhhHHhcCC---EEEEeeccCCCCccHHHHHHHHHHhhh---hhheeEEecccc-cccccccHHH
Confidence 556788899999999999999999 899999999999999999999887533 345789999999 787754 999
Q ss_pred HHHHHHHcCCEEEEecccccccc-cccchhhhhcCCCCccEEEECCccccCCCCceEE-----EEEeccchhhhhccCCc
Q psy14299 118 IATVCEKYDLWMHVDACWGGSLI-FSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSI-----LLIKEKGLLHQANATAA 191 (448)
Q Consensus 118 I~~ia~~~g~~l~VD~A~~~~~~-~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~-----l~vr~~~~~~~~~~~~~ 191 (448)
++++.|+||..+..|||---... .+. .|--++|+...+.||.+..|.|.|. +.++.. +...++..+
T Consensus 702 ~cd~iHehGGQVYlDGANMNAqVGlc~------pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~H--LapfLP~Hp 773 (1001)
T KOG2040|consen 702 ICDIIHEHGGQVYLDGANMNAQVGLCR------PGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPSHP 773 (1001)
T ss_pred HHHHHHhcCCEEEecCCCccceecccC------CccccccceeecccceeeecCCCCCCCCCccchhhh--ccccCCCCC
Confidence 99999999999999997432211 111 0111589999999999887765553 333321 222222211
Q ss_pred ccccccCcccccccCCCCCcccCCCCc---hhHH-HHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhh
Q psy14299 192 TYLFQQDKFYDVSFDTGDKSVQCGRKV---DAFK-LWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQA 267 (448)
Q Consensus 192 ~y~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (448)
.+.... ..+. ...+--.+.++ ..++ .|+.++.+|..|++
T Consensus 774 -Vvs~~~-~~~~----~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~------------------------------- 816 (1001)
T KOG2040|consen 774 -VVSPGR-PEDT----SPVGSVSAAPWGSALILPISWAYIKMMGSGGLK------------------------------- 816 (1001)
T ss_pred -ccCCCC-CCCC----CCccceeccCCCcceeehhHHHHHHHhcccccc-------------------------------
Confidence 111000 0000 00000011111 1122 44445555555544
Q ss_pred hhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCC
Q psy14299 268 NATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEF 347 (448)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~ 347 (448)
.--+...-+++|+.++|+++ ++++...+
T Consensus 817 --------------------------------------------------~as~~AiLNaNYMakRLe~h--Ykil~~~~ 844 (1001)
T KOG2040|consen 817 --------------------------------------------------DASKIAILNANYMAKRLESH--YKILFRGE 844 (1001)
T ss_pred --------------------------------------------------hhhHHHhhhhHHHHHHHhhc--cceeEecC
Confidence 44444556799999999987 55552211
Q ss_pred c---eeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHH
Q psy14299 348 Q---CTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDY 424 (448)
Q Consensus 348 ~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~ 424 (448)
. ...+.+..+| .+ ...+--.-.+.++|.+.| +......|.-. +++=|-+ ...-+++|+||
T Consensus 845 ~~~vaHEFIlD~r~--fK---------~~agieavDvAKRL~DYg-FHaPTmswPV~---gtLMIEP--TESE~k~ElDR 907 (1001)
T KOG2040|consen 845 NGLVAHEFILDLRP--FK---------KTAGIEAVDVAKRLMDYG-FHAPTMSWPVA---GTLMIEP--TESEDKAELDR 907 (1001)
T ss_pred Ccceeeeeeeechh--hc---------cccCCcHHHHHHHHHhcc-CCCCccccccC---CceEecc--CccccHHHHHH
Confidence 1 2222332222 21 111112347889999998 44443334333 6788888 46788899999
Q ss_pred HHHHHHHHHHHhHH
Q psy14299 425 AIDQIELRGAEVDL 438 (448)
Q Consensus 425 l~~al~~~~~~~~~ 438 (448)
+.+++-.+.+++..
T Consensus 908 fcdAliSIreEI~~ 921 (1001)
T KOG2040|consen 908 FCDALISIREEIAQ 921 (1001)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998877653
No 301
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.39 E-value=1.7e-10 Score=115.98 Aligned_cols=158 Identities=15% Similarity=0.069 Sum_probs=107.7
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhC-------------CC---CCcEE
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLG-------------IG---MDNVI 68 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g-------------~~---~~~v~ 68 (448)
+-|+++||||++.|+..||..- ..+.+|.+.-..|-+.....--.| +. ...++
T Consensus 112 vrfvnSGTEAtmsAiRlARa~T-----------gR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti 180 (432)
T COG0001 112 VRFVNSGTEATMSAIRLARAYT-----------GRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTL 180 (432)
T ss_pred EEEecchhHHHHHHHHHHHHhh-----------CCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEE
Confidence 4699999999999999999763 234456666667765544433222 10 12466
Q ss_pred EEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccc
Q psy14299 69 RVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEK 144 (448)
Q Consensus 69 ~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~ 144 (448)
.+|.+ |++.+++++++. +.....|++.-.-.+-|.+.| +++|.++|++||+.|+.|+...+.-....-
T Consensus 181 ~~~yN-----D~~al~~~~~~~---g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gG 252 (432)
T COG0001 181 VLPYN-----DLEALEEAFEEY---GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGG 252 (432)
T ss_pred EecCC-----CHHHHHHHHHHc---CCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcc
Confidence 77777 999999999873 335667888777777888876 788999999999999999977654432111
Q ss_pred hhhhhcCCCCccEEEECCccccCCCCceEEEEEeccchhhhh
Q psy14299 145 YSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQA 186 (448)
Q Consensus 145 ~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~ 186 (448)
... ..++ ..|..+ .-|.+++-..+|.+-.|+ +++...
T Consensus 253 aq~-~~gi-~PDltt--lGKiIGGGlP~ga~gGr~-eiM~~~ 289 (432)
T COG0001 253 AQG-YYGV-EPDLTT--LGKIIGGGLPIGAFGGRA-EIMEQL 289 (432)
T ss_pred ccc-ccCc-Ccchhh--hhhhhcCCcceeeeccHH-HHHhhh
Confidence 111 1123 256655 479888888888877655 455543
No 302
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.39 E-value=2.3e-10 Score=117.71 Aligned_cols=153 Identities=13% Similarity=0.067 Sum_probs=108.0
Q ss_pred EeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC--CCCCcCHHHHH
Q psy14299 7 LLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN--ERGQMICSFLE 84 (448)
Q Consensus 7 ~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~--~~g~id~e~Le 84 (448)
.|+||+.|...++.+.+.-. .+++.|++++..+..+...++..|. +++.+|.. +++.+|++.++
T Consensus 102 ~t~G~~~al~~~~~~l~~~~-----------~~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~l~~~~~~~~d~~~l~ 167 (404)
T PTZ00376 102 QALSGTGALRLGFEFLKRFL-----------PAGTTVYVSNPTWPNHVNIFKSAGL---NVKEYRYYDPKTKGLDFDGML 167 (404)
T ss_pred eccCcchHHHHHHHHHHHhc-----------CCCCEEEEcCCCchhHHHHHHHcCC---ceeeccccCcccCCcCHHHHH
Confidence 48899999776665433221 2678899999999999999999999 78889873 35789999999
Q ss_pred HHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccc---cchh-hhhcCCCCccE
Q psy14299 85 QTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFS---EKYS-FVLKGINRANS 157 (448)
Q Consensus 85 ~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~---~~~~-~~~~~~~~aD~ 157 (448)
+.+++. ..+++++++..++|+||...+ +++|+++|++||+++++|.+|....... +... ..+.....-=+
T Consensus 168 ~~~~~~---~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi 244 (404)
T PTZ00376 168 EDLRTA---PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFL 244 (404)
T ss_pred HHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEE
Confidence 998642 123567888999999998755 6778889999999999999987544311 0000 00111100115
Q ss_pred EEECCccccCCC-CceEEEE
Q psy14299 158 VSWNPHKMLGAP-LQCSILL 176 (448)
Q Consensus 158 ~~~s~hK~l~~P-~g~G~l~ 176 (448)
++.|+.|.++.| .-+|+++
T Consensus 245 ~i~SfSK~~~~~GlRvG~~~ 264 (404)
T PTZ00376 245 VAQSFSKNMGLYGERIGALH 264 (404)
T ss_pred EEEeCCCcccccccccceEE
Confidence 667889998855 4467663
No 303
>PRK07049 methionine gamma-lyase; Validated
Probab=99.39 E-value=2.7e-10 Score=117.81 Aligned_cols=138 Identities=9% Similarity=0.070 Sum_probs=101.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~id 79 (448)
..++++||+.++..++.+..+ +++.|+++...+......+ +..|+ +++.++. ..|
T Consensus 100 ~~iv~~sG~~Ai~~~l~al~~--------------~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi---~~v~~~~----~~d 158 (427)
T PRK07049 100 SAALFSSGMSAIATTLLAFVR--------------PGDVILHSQPLYGGTETLLAKTFRNFGV---GAVGFAD----GLS 158 (427)
T ss_pred cEEEEccHHHHHHHHHHHHhC--------------CCCEEEEcCCCcccHHHHHHHHHHhcCc---EEEEEeC----CCC
Confidence 578899999998777766554 5667888887777665543 34465 5555552 257
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHH------cCCEEEEecccccccccccchhhhhcCCC
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEK------YDLWMHVDACWGGSLIFSEKYSFVLKGIN 153 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~------~g~~l~VD~A~~~~~~~~~~~~~~~~~~~ 153 (448)
++++++.+++.... .++++|.+..++|++|.+.|+++|.++++. ++++++||.++.......+ +. .
T Consensus 159 ~~~l~~~l~~~~~~-~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~p-----l~--~ 230 (427)
T PRK07049 159 EAAIGAAAEAAAAK-GRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKP-----LE--H 230 (427)
T ss_pred HHHHHHHHHhhccC-CCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCc-----cc--c
Confidence 88898888653221 358899999999999999999999999988 8999999999764432111 11 1
Q ss_pred CccEEEECCccccCCCC
Q psy14299 154 RANSVSWNPHKMLGAPL 170 (448)
Q Consensus 154 ~aD~~~~s~hK~l~~P~ 170 (448)
++|+++.|+.|.++++.
T Consensus 231 g~divv~S~SK~~gG~~ 247 (427)
T PRK07049 231 GADLSVYSLTKYVGGHS 247 (427)
T ss_pred CCCEEEEcCceeecCCC
Confidence 47999999999999643
No 304
>PRK05839 hypothetical protein; Provisional
Probab=99.39 E-value=1.7e-10 Score=117.39 Aligned_cols=110 Identities=12% Similarity=-0.078 Sum_probs=83.4
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC--CCcCHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER--GQMICSF 82 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~--g~id~e~ 82 (448)
.++|+|+++++...+.+.... .+++.|+++...+..+...++..|+ +++.++.+++ +.+|.++
T Consensus 86 I~it~G~~~al~~~~~~~~~~------------~~gd~vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~ 150 (374)
T PRK05839 86 LIPTFGTREVLFNFPQFVLFD------------KQNPTIAYPNPFYQIYEGAAIASRA---KVLLMPLTKENDFTPSLNE 150 (374)
T ss_pred EEEecCcHHHHHHHHHHHhcC------------CCCCEEEECCCCchhhHHHHHhcCC---EEEEeecccccCCcCCcch
Confidence 678888888876665544321 1466788898999999999999898 7999998754 3444433
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccc
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGS 138 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~ 138 (448)
. .++ ++++|+++.++|+||.+.+ +++|.++|++||+++++|.+|+-.
T Consensus 151 ~--~~~-------~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~ 200 (374)
T PRK05839 151 K--ELQ-------EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEI 200 (374)
T ss_pred h--hhc-------cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhc
Confidence 2 221 3789999999999998766 667778899999999999998753
No 305
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.38 E-value=5.5e-11 Score=130.11 Aligned_cols=261 Identities=11% Similarity=0.065 Sum_probs=170.0
Q ss_pred eEEEecCCCchHHHHHHHHh--CCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHH
Q psy14299 41 LCMFTSEDSHYSMLKAAHWL--GIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEI 118 (448)
Q Consensus 41 ~~Vl~~~~~H~s~~~~~~~~--g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I 118 (448)
..|++++..|+......+-. +.+. +++. +++++.+++ .+..|++..+++ .|.+.|+++|
T Consensus 169 ~~~~v~~~~hP~~~~v~~t~~~~~g~-~i~~-----------~~~~~~~~~------~~~~v~vq~P~~-~G~i~d~~~i 229 (954)
T PRK12566 169 NRFFVDEHCHPQTLSVLRTRAEGFGF-ELVV-----------DAVDNLAAH------AVFGALLQYPDT-HGEIRDLRPL 229 (954)
T ss_pred CEEEECCCCCHHHHHHHHHhhhcCCc-EEEE-----------cchhhcCCC------CEEEEEEECCCC-ceEEccHHHH
Confidence 45899999999877766522 2211 3332 334444322 366788888776 9999999999
Q ss_pred HHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCcc-----ccCCCCceEEEEEeccchhhhhccCCccc
Q psy14299 119 ATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPHK-----MLGAPLQCSILLIKEKGLLHQANATAATY 193 (448)
Q Consensus 119 ~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~hK-----~l~~P~g~G~l~vr~~~~~~~~~~~~~~y 193 (448)
.+++|++|+.++ +++--........ + |--++|+++.+++- .+|+| ..|+|.++++ +.+ ..|+-
T Consensus 230 ~~~~h~~gal~~-~~~d~laL~ll~~-P----ge~GADI~vG~~Q~fGvp~~~GGP-~ag~~a~~~~-~~R----~~PGR 297 (954)
T PRK12566 230 IDQLHGQQALAC-VAADLLSLLVLTP-P----GELGADVVLGSTQRFGVPMGYGGP-HAAYFACRDD-YKR----AMPGR 297 (954)
T ss_pred HHHHHHcCCEEE-EEeCHHHHhCCCC-h----hhcCCcEEeeCCCcCCCCCCCCCC-CeeeeeehHH-HHh----hCCCC
Confidence 999999999855 4432221111110 0 11258999766553 33444 3677888764 222 23444
Q ss_pred ccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH---HHHHhhhhccCCCccchhhhhhhhhhhhhhhhh
Q psy14299 194 LFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH---FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANAT 270 (448)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (448)
+-..+... . |..+++- .=++++++.|+.|+||| |++
T Consensus 298 ivG~s~D~------------~----------------G~~a~~l~LqtREQHIRReKAtSNICT-------------~qa 336 (954)
T PRK12566 298 IIGVSRDA------------R----------------GNTALRMALQTREQHIRREKANSNICT-------------AQV 336 (954)
T ss_pred ccceeecC------------C----------------CCeeeehhhhHHHHHhhhccccchhhH-------------HHH
Confidence 43322110 1 1112221 12678899999999999 444
Q ss_pred hhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCcee
Q psy14299 271 AATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCT 350 (448)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~ 350 (448)
.+ ++.....+.+.|.+|++++.++.+.++.|+.+.|.+ +|+++. .++.+.
T Consensus 337 L~----------------------------A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~-~~~fF~ 386 (954)
T PRK12566 337 LL----------------------------ANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA-KGIKRL-NRHFFD 386 (954)
T ss_pred HH----------------------------HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh-cCCccc-cCCccc
Confidence 33 666777888999999999999999999999999999 699987 566677
Q ss_pred eEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHH
Q psy14299 351 NICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIE 430 (448)
Q Consensus 351 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~ 430 (448)
.+.+.+ .. . ..++.++..+.|+-+ . .... +.+.+|+ ...+|.+|++.|++++.
T Consensus 387 ~~~v~~-~~--~---------------~~~~~~~a~~~~~n~-r--~~~~----~~~~~s~--de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 387 TLTLEV-GG--A---------------QAAIIESAEAARINL-R--ILGR----GRLGVSL--DETCDEATVARLFDIFL 439 (954)
T ss_pred eEEEEc-cC--C---------------HHHHHHHHHHCCCee-E--EeCC----CeEEEEe--CCCCCHHHHHHHHHHhc
Confidence 777754 10 0 236777777777322 2 1222 4789999 68999999999999995
No 306
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.36 E-value=2.9e-10 Score=113.18 Aligned_cols=153 Identities=18% Similarity=0.178 Sum_probs=101.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhC-------CC--CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLG-------IG--MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g-------~~--~~~v~~v~~~~ 74 (448)
-++|+++|||||=.|+..||.+.. + + .....|.+...-|--..-+....+ .. ...+..+|.+
T Consensus 102 ~vff~NSGaEA~EaAiKlARk~~~------~-~-~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn- 172 (404)
T COG4992 102 RVFFCNSGAEANEAALKLARKYTG------D-P-EKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN- 172 (404)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHcC------C-C-CCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-
Confidence 378999999999999999998742 0 0 112334444444432111111111 10 1136667766
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccchhhhhc
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
|++++++++++ .+..|++.-..-..|++-| ++++.++|++||+++++|..|.+---...-+...-.
T Consensus 173 ----Di~al~~ai~~------~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~ 242 (404)
T COG4992 173 ----DIEALEAAIDE------DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHY 242 (404)
T ss_pred ----CHHHHHHHhcc------CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHh
Confidence 99999999976 4778888888887887755 888999999999999999998863221111111111
Q ss_pred CCCCccEEEECCccccCCCCceEEEEEe
Q psy14299 151 GINRANSVSWNPHKMLGAPLQCSILLIK 178 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P~g~G~l~vr 178 (448)
++ ..|++++ -|.|++-..+|.++.+
T Consensus 243 gV-~PDI~tl--aK~LgGG~PigA~la~ 267 (404)
T COG4992 243 GV-EPDILTL--AKALGGGFPIGAMLAT 267 (404)
T ss_pred CC-CCCEEEe--eccccCCccceeeEEc
Confidence 33 2577775 7988887888998886
No 307
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.36 E-value=6.9e-10 Score=115.30 Aligned_cols=163 Identities=17% Similarity=0.172 Sum_probs=95.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC----------CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG----------MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~----------~~~v~~v~~~ 73 (448)
.++|+++||+||-.|+..||..- | ...+|-.....|-...-+....+.. ...+..+|.+
T Consensus 117 ~v~f~~SGsEA~e~AlklAr~~t-------g----r~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~ 185 (441)
T PRK05769 117 KVFFTNSGTESNEAAIKIARYHT-------G----RKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYP 185 (441)
T ss_pred EEEECCchHHHHHHHHHHHHHHh-------C----CCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCC
Confidence 57899999999999999999752 1 2334444555665544444432210 0123444432
Q ss_pred CCCC-----cC--------HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccc
Q psy14299 74 ERGQ-----MI--------CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWG 136 (448)
Q Consensus 74 ~~g~-----id--------~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~ 136 (448)
...+ -| .+.+++.+-+....+..+.+|++.-.....|.+.| +++|.++|++||+++++|.++.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t 265 (441)
T PRK05769 186 NPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT 265 (441)
T ss_pred ccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 2111 11 23344422211011235667777777777888888 9999999999999999999987
Q ss_pred cccccccchhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 137 GSLIFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
+.-.....+.....++ ..|.+++ .|.+++-...|.+..+++
T Consensus 266 G~gr~G~~~a~~~~gv-~pDivt~--~K~l~~G~p~gav~~~~~ 306 (441)
T PRK05769 266 GMGRTGKMFAIEHFGV-EPDIITL--AKAIAGGLPLGAVIGRAE 306 (441)
T ss_pred CCCcccceehhhccCC-CCCEEEE--cccccCCcccEEEEEehh
Confidence 4211111011111133 2588875 487775555777777654
No 308
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.36 E-value=4.6e-10 Score=115.67 Aligned_cols=162 Identities=21% Similarity=0.216 Sum_probs=95.0
Q ss_pred EEE-eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC-------C--CCcEEEEecCC
Q psy14299 5 PFL-LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI-------G--MDNVIRVKTNE 74 (448)
Q Consensus 5 g~~-t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~-------~--~~~v~~v~~~~ 74 (448)
.+| +++||+||-.|+..||... | ...+|-.....|-...-+....+. + ...+..+|.+.
T Consensus 101 ~~f~~~sGseA~e~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~ 169 (412)
T TIGR02407 101 VQFPGPTGTNAVESALKLARKVT-------G----RSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDG 169 (412)
T ss_pred EEEeCCCchHHHHHHHHHHhhhc-------C----CCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCC
Confidence 455 5899999999999998751 1 223444455566554444443321 0 11234444321
Q ss_pred CCC---cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc----cCHHHHHHHHHHcCCEEEEecccccccccccchhh
Q psy14299 75 RGQ---MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF----DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF 147 (448)
Q Consensus 75 ~g~---id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~----~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~ 147 (448)
... -+++.+++.+++.......+.+|++.-...+.|.+ .-+++|.++|++||+++++|+.+.+.-.....+..
T Consensus 170 ~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~ 249 (412)
T TIGR02407 170 YLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSF 249 (412)
T ss_pred ccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHh
Confidence 111 24677888885421111245677776666667764 33899999999999999999998632111100011
Q ss_pred hhcCCCCccEEEECCccccCC-CCceEEEEEecc
Q psy14299 148 VLKGINRANSVSWNPHKMLGA-PLQCSILLIKEK 180 (448)
Q Consensus 148 ~~~~~~~aD~~~~s~hK~l~~-P~g~G~l~vr~~ 180 (448)
...++ ..|.++++ |++++ -..+|+++++++
T Consensus 250 ~~~~v-~PDi~~~~--K~lg~~G~pigav~~~~~ 280 (412)
T TIGR02407 250 EPAGI-EPDIVCLS--KSISGYGLPLALTLIKPE 280 (412)
T ss_pred cccCC-CCCEEEec--hhccCCccceeEEEEchh
Confidence 11233 36887764 99874 455888888654
No 309
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.36 E-value=2.2e-10 Score=120.53 Aligned_cols=166 Identities=20% Similarity=0.188 Sum_probs=100.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.++|+++||+||..|+..+|.... ..|.+ ....+|......|-+...+..+.|... ..+..++.+.
T Consensus 153 ~v~f~~SGsEA~e~AlKlAr~~~~----~~g~~-~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~ 227 (504)
T PLN02760 153 KVFFTNSGSEANDTQVKLVWYYNN----ALGRP-NKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPH 227 (504)
T ss_pred EEEEeCChHHHHHHHHHHHHHHHH----hcCCC-CCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCc
Confidence 378999999999999999985410 11211 134567777888888776666554311 0122233211
Q ss_pred CCC-------------cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccc-c
Q psy14299 75 RGQ-------------MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACW-G 136 (448)
Q Consensus 75 ~g~-------------id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~-~ 136 (448)
..+ ...++|++.+.+. ....+.+|++.-.....|.+.| +++|.++|++||+++++|+++ |
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TG 305 (504)
T PLN02760 228 YWRFHLPGETEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICA 305 (504)
T ss_pred ccccCCCCCcHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhC
Confidence 111 1124567766431 1234667777777777788888 999999999999999999998 4
Q ss_pred cccccccchhhhhcCCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 137 GSLIFSEKYSFVLKGINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
.|-. ...+.....++ ..|++++ -|.+++-+ ..|.+.++++
T Consensus 306 fGRt-G~~~a~e~~gv-~PDivtl--gK~lggG~~PigAv~~~~~ 346 (504)
T PLN02760 306 FGRL-GTMFGCDKYNI-KPDLVSL--AKALSSAYMPIGAVLVSPE 346 (504)
T ss_pred Cccc-chhhHHHhcCC-CCcEEEe--cccccCCccccceEeecHH
Confidence 4332 11111112234 3787665 78886521 3566666543
No 310
>PRK06541 hypothetical protein; Provisional
Probab=99.34 E-value=1.1e-09 Score=114.34 Aligned_cols=166 Identities=15% Similarity=0.170 Sum_probs=96.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
.++|+++||+|+-.|+..+|.... ..|.+ ....+|......|-...-+....+.. ...+..+|.+.
T Consensus 114 ~v~f~~sGseAve~AlklAr~~~~----~~g~~-~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~ 188 (460)
T PRK06541 114 RVFFTTGGSEAVESAWKLAKQYFK----LTGKP-GKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTN 188 (460)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHH----hcCCC-CccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCc
Confidence 478999999999999999987521 01111 02234555555665544443332211 01233344322
Q ss_pred CCC-----cC--------HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccc-c
Q psy14299 75 RGQ-----MI--------CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACW-G 136 (448)
Q Consensus 75 ~g~-----id--------~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~-~ 136 (448)
..+ -+ ++.+++.+++. ....+.+|++.-...+.|.+.| +++|.++|++||+++++|+++ |
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG 266 (460)
T PRK06541 189 FYRAPELGDDPEAFGRWAADRIEEAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICA 266 (460)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC
Confidence 111 12 25667666531 1224555666666777898888 999999999999999999998 4
Q ss_pred cccccccchhhhhcCCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 137 GSLIFSEKYSFVLKGINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
.|-. ...+.....++ ..|+++ ..|.+++-. ..|.++.+++
T Consensus 267 fGR~-G~~~a~~~~gv-~PDivt--~gK~l~~G~~pigav~~~~~ 307 (460)
T PRK06541 267 FGRL-GEMFGCERFGY-VPDIIT--CAKGITSGYSPLGAMIASDR 307 (460)
T ss_pred CCcC-chhhhhhhcCC-CCCEEE--ecccccCCccceeEEEEcHH
Confidence 4422 11111111233 368776 589887532 4677777664
No 311
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.34 E-value=7.7e-10 Score=113.79 Aligned_cols=158 Identities=17% Similarity=0.120 Sum_probs=89.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.++|+++||+||-.|+..||.... +.|.+.....+|-.....|-...-+....+... ..+..+|.+
T Consensus 100 ~v~f~~sGseA~e~AlklAr~~~~----~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~- 174 (408)
T PRK04612 100 KVFLCNSGTEANEAAIKLVRKWAS----SQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFN- 174 (408)
T ss_pred EEEEcCchHHHHHHHHHHHHHHHH----hhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCC-
Confidence 479999999999999999987521 112100122344445556655444444333210 012222222
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc-cccC----HHHHHHHHHHcCCEEEEecccccccccccchhhhh
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG-AFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVL 149 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG-~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~ 149 (448)
|++.+++.+++ .+...++..+...+| .+.| +++|.++|++||+++++|+++.+.-.....+....
T Consensus 175 ----d~~~l~~~~~~------~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~ 244 (408)
T PRK04612 175 ----DVEALEAAMAG------GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQ 244 (408)
T ss_pred ----CHHHHHHhhCC------CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhh
Confidence 78889888842 234444544555555 3332 89999999999999999999874222111111111
Q ss_pred cCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 150 KGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 150 ~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
.++ ..|+++ ..|.+++-...|.++.++
T Consensus 245 ~~~-~pdi~t--~~K~l~~G~piga~~~~~ 271 (408)
T PRK04612 245 EQV-TPDIVT--LAKALGGGFPIGAMLAGP 271 (408)
T ss_pred cCC-CCCEEE--EcchhcCCCceEEEEECH
Confidence 111 245554 478887534577776654
No 312
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.34 E-value=1.3e-09 Score=113.15 Aligned_cols=161 Identities=14% Similarity=0.086 Sum_probs=95.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
.++|+++||+||-.|+..||..- | ...++-.....|-....+....+.. ...+..+|.+.
T Consensus 103 ~v~f~~sGsEAve~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (443)
T PRK08360 103 KVSFGLSGSDANDGAIKFARAYT-------K----RRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPD 171 (443)
T ss_pred EEEEcCCHHHHHHHHHHHHHHhc-------C----CCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCc
Confidence 57999999999999999998752 1 2223333445565444444433321 01244444332
Q ss_pred CCC------------cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccc
Q psy14299 75 RGQ------------MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGS 138 (448)
Q Consensus 75 ~g~------------id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~ 138 (448)
..+ -+.+.+++.+++.. .+.++.+|++.-..+++|...| +++|.++|++||+++++|.+|.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 250 (443)
T PRK08360 172 CYRCPFGKEPGSCKMECVEYIKEKFEGEV-YAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGL 250 (443)
T ss_pred cccccccCchhhhHHHHHHHHHHHHHhcc-CCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 111 12345566664311 1245777888766678887765 899999999999999999998753
Q ss_pred cccccchhhhhcCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 139 LIFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 139 ~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
-.....+.....++ ..|++++ .|.+++-..+|++..++
T Consensus 251 gr~G~~~a~~~~~~-~pDiitl--sK~l~~G~pigav~~~~ 288 (443)
T PRK08360 251 GRTGKWFAIEHFGV-EPDIITL--GKPLGGGLPISATIGRA 288 (443)
T ss_pred CcCccchhhhhcCC-CCCEEEe--cccccCCceeEEEEEcH
Confidence 22111111111133 2577655 89888534577777654
No 313
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.32 E-value=9.6e-10 Score=113.85 Aligned_cols=153 Identities=14% Similarity=0.043 Sum_probs=95.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC----------CC------cE
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG----------MD------NV 67 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~----------~~------~v 67 (448)
.++|+++|++||..|+..++... ....+|......|-...-.....+.+ .. ..
T Consensus 108 ~v~~~~sGseA~e~Aik~a~~~~-----------g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (426)
T PRK00062 108 MVRMVNSGTEATMSAIRLARGYT-----------GRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHT 176 (426)
T ss_pred EEEEecCHHHHHHHHHHHHHHHh-----------CCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccce
Confidence 57899999999999999988751 13345556666676543222221110 00 01
Q ss_pred EEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccccccc
Q psy14299 68 IRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSE 143 (448)
Q Consensus 68 ~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~ 143 (448)
..+|. -|++++++.+++. +.++.+|++.....++|.+.| +++|.++|++||+++++|++|.+. ....
T Consensus 177 ~~~~~-----~d~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~-r~g~ 247 (426)
T PRK00062 177 LTAPY-----NDLEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGF-RVAL 247 (426)
T ss_pred EEcCC-----CCHHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcc-ccCC
Confidence 12222 2789999988642 235678888877788898988 999999999999999999998744 2211
Q ss_pred chhhhhcCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 144 KYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 144 ~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
.+.....++ ..|+ .+..|.+++-...|.+..++
T Consensus 248 ~~~~~~~~~-~pDi--~~~gK~l~~G~p~ga~~~~~ 280 (426)
T PRK00062 248 GGAQGYYGV-TPDL--TTLGKIIGGGLPVGAFGGRR 280 (426)
T ss_pred ccHHHHhCC-Ccch--HhhhhHhhCCCcceeeeEHH
Confidence 111111122 2464 34579887533356665543
No 314
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.32 E-value=1.3e-09 Score=112.68 Aligned_cols=153 Identities=14% Similarity=0.051 Sum_probs=93.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC----------------CcE
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM----------------DNV 67 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~----------------~~v 67 (448)
.++|++|||+|+..|+..+|... .++.+|......|-.........+.+. ..+
T Consensus 106 ~v~~~~sGseA~e~Alk~ar~~~-----------gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (423)
T TIGR00713 106 MVRFVNSGTEATMSAVRLARGYT-----------GRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLT 174 (423)
T ss_pred EEEEeCCHHHHHHHHHHHHHHhh-----------CCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccce
Confidence 47899999999999999988752 133344445555543332222111100 011
Q ss_pred EEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccccccc
Q psy14299 68 IRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSE 143 (448)
Q Consensus 68 ~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~ 143 (448)
..+|. -|++++++.+++. +.++.+|++.....++|.+.| +++|.++|++||+++++|++|.+... ..
T Consensus 175 ~~~~~-----~d~~~l~~~i~~~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~-g~ 245 (423)
T TIGR00713 175 LVLPY-----NDLEALEEVFEEY---GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRV-AL 245 (423)
T ss_pred EEeCC-----CCHHHHHHHHHHc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccccc-Cc
Confidence 22222 1899999998642 235677888655555897766 79999999999999999999865421 11
Q ss_pred chhhhhcCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 144 KYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 144 ~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
.......++ ..|.+ +..|.+++-...|.++.++
T Consensus 246 ~~~~~~~~~-~pDi~--t~sK~l~~G~pig~v~~~~ 278 (423)
T TIGR00713 246 GGAQEYFGV-EPDLT--TLGKIIGGGLPVGAFGGRR 278 (423)
T ss_pred chhHHHhCC-Ccchh--hhhhhhcCCCceeeeeEHH
Confidence 111111222 24644 5789887433467776654
No 315
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.32 E-value=8.7e-10 Score=110.74 Aligned_cols=143 Identities=10% Similarity=-0.028 Sum_probs=91.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++... ..+.. +++ |++...++..+...++..|. +++.++.++ +.
T Consensus 73 ~I~i~~Gs~e~i~~l-~~~~~--------------~g~-v~v~~P~y~~y~~~~~~~g~---~~~~v~~~~------~~- 126 (339)
T PRK06959 73 HVLPVAGSQAAIRAL-PALLP--------------RGR-VGIAPLAYSEYAPAFARHGH---RVVPLDEAA------DT- 126 (339)
T ss_pred cEEECcCHHHHHHHH-HHhcC--------------CCe-EEEcCCCcHHHHHHHHHCCC---EEEeecccc------hh-
Confidence 568899999986533 22222 444 66677888889999999988 677777642 22
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHH---HHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATV---CEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~i---a~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
+.+ ..+.++++.++|+||.+.+.+++.++ |++++.++++|.+|.-.... +...... .... =++.-
T Consensus 127 ---~~~------~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~-~s~~~~~-~~~~-vi~l~ 194 (339)
T PRK06959 127 ---LPA------ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA-ASLAAHT-DRPG-LVVLR 194 (339)
T ss_pred ---ccc------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc-ccchhcc-CCCC-EEEEe
Confidence 211 24588999999999999887666655 56789999999998854321 1111100 0011 15667
Q ss_pred CCccccCCC-CceEEEEEeccchhhh
Q psy14299 161 NPHKMLGAP-LQCSILLIKEKGLLHQ 185 (448)
Q Consensus 161 s~hK~l~~P-~g~G~l~vr~~~~~~~ 185 (448)
|+.|.++.| .-+|+++. ++++...
T Consensus 195 SfSK~~gl~GlRiGy~v~-~~~li~~ 219 (339)
T PRK06959 195 SVGKFFGLAGVRAGFVLA-APALLAA 219 (339)
T ss_pred cChhhcCCcchheEEEec-CHHHHHH
Confidence 899988755 34566665 3444433
No 316
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.32 E-value=2e-09 Score=112.03 Aligned_cols=163 Identities=13% Similarity=0.046 Sum_probs=91.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC--------C--CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI--------G--MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~--------~--~~~v~~v~~~ 73 (448)
..+|+++||+||-.|+..||... | .+.+|......|-...-+..+.+. + ...+..+|..
T Consensus 119 ~v~f~~sGseA~e~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (443)
T PRK06058 119 RSALFNSGAEAVENAVKIARSYT-------G----RQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMS 187 (443)
T ss_pred EEEEeCCcHHHHHHHHHHHHHhh-------C----CCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCC
Confidence 57899999999999999998752 1 233455555666655554443321 0 1122333321
Q ss_pred CCCC------cCH-HHHHHHHHHhhh--cCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccc
Q psy14299 74 ERGQ------MIC-SFLEQTIQTSLA--EKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLI 140 (448)
Q Consensus 74 ~~g~------id~-e~Le~~l~~~~~--~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~ 140 (448)
...+ .+. +.+++.++.-.+ .+.++.+|++.-.....|.+.| +++|.++|++||+++++|+.+.+.-.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgR 267 (443)
T PRK06058 188 YPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFAR 267 (443)
T ss_pred cccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 1111 111 222222221110 1234556666555555566654 99999999999999999998875322
Q ss_pred cccchhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 141 FSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 141 ~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
....+.....++ ..|.++++ |.+++-...|.++.+++
T Consensus 268 tG~~fa~~~~gv-~PDiv~~g--K~l~~G~Pi~av~~~~~ 304 (443)
T PRK06058 268 TGAWFACEHEGI-VPDLITTA--KGIAGGLPLSAVTGRAE 304 (443)
T ss_pred ChhhhHHHhcCC-CCCEEEEc--ccccCCCccEEEEEcHH
Confidence 111111111233 36888884 98875556788777654
No 317
>PLN02397 aspartate transaminase
Probab=99.31 E-value=1.1e-09 Score=113.38 Aligned_cols=132 Identities=10% Similarity=0.043 Sum_probs=94.4
Q ss_pred CCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec-C-CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC--
Q psy14299 39 PPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT-N-ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP-- 114 (448)
Q Consensus 39 ~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~-~-~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~-- 114 (448)
|++.|++++..+..+...++..|. +++.+|. + +++.+|++.+++.+.+. ..+++++++..++|+||.+.+
T Consensus 141 pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~v~l~~~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~P~NPTG~v~s~e 214 (423)
T PLN02397 141 PGSTIYIPNPTWGNHHNIFRDAGV---PVRTYRYYDPKTRGLDFDGLLEDLKAA---PDGSFVLLHACAHNPTGVDPTPE 214 (423)
T ss_pred CCCEEEEeCCCchhHHHHHHHcCC---eEEEeecccCcCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHH
Confidence 667899999999999999999998 7888886 3 34689999999888642 135678888999999998855
Q ss_pred -HHHHHHHHHHcCCEEEEecccccccccc---cchh-hhhcCCCCccEEEECCccccCCC-CceEEEE
Q psy14299 115 -LDEIATVCEKYDLWMHVDACWGGSLIFS---EKYS-FVLKGINRANSVSWNPHKMLGAP-LQCSILL 176 (448)
Q Consensus 115 -l~~I~~ia~~~g~~l~VD~A~~~~~~~~---~~~~-~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~ 176 (448)
+++|+++|++||+++++|.+|....... +... ........-=+++.|+.|.++.| .-+|+++
T Consensus 215 ~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v 282 (423)
T PLN02397 215 QWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALS 282 (423)
T ss_pred HHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEE
Confidence 6678889999999999999987654311 0000 01111100114556889998854 3456664
No 318
>PRK12403 putative aminotransferase; Provisional
Probab=99.31 E-value=4.4e-09 Score=109.83 Aligned_cols=165 Identities=20% Similarity=0.173 Sum_probs=97.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEe--cCCCchHHHHHHHHhCCCC--------CcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFT--SEDSHYSMLKAAHWLGIGM--------DNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~--~~~~H~s~~~~~~~~g~~~--------~~v~~v~~~ 73 (448)
.++|+++||+||..|+..+|.... ..| .++..+++ ....|-+...+..+.+... ..+..+|.+
T Consensus 117 ~v~f~~SGseA~e~AiklAr~~~~----~~g---~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p 189 (460)
T PRK12403 117 HAIYTNSGSEANEVLIRTVRRYWQ----VLG---KPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEP 189 (460)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHH----hhC---CCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCC
Confidence 479999999999999999986410 001 12222333 3445888777766554321 113333322
Q ss_pred CCC----Cc--------CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccc
Q psy14299 74 ERG----QM--------ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGG 137 (448)
Q Consensus 74 ~~g----~i--------d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~ 137 (448)
... .+ +.++|++.+.+. ....+.+|++.-.....|.+.| +++|.++|++||+++++|+++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tG 267 (460)
T PRK12403 190 YWYANGGELTPAEFGRRAALQLEEKILEL--GAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGG 267 (460)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHHHh--CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 100 11 135566655431 1134567777777777788887 99999999999999999999864
Q ss_pred ccccccchhhhhcCCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 138 SLIFSEKYSFVLKGINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 138 ~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
.--....+.....++. .|+++ ..|.+++-+ .+|.++.+++
T Consensus 268 fGRtG~~~a~e~~gv~-PDiv~--~gK~lggG~~Piga~v~~~~ 308 (460)
T PRK12403 268 FGRTGEWFAHEHFGFE-PDTLS--IAKGLTSGYVPMGGLVLSKR 308 (460)
T ss_pred CCcCchhhhhhhcCCC-CCeEE--EcccccccccceEEEEECHH
Confidence 3111111111112343 58887 588877543 5677667543
No 319
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.29 E-value=7.1e-10 Score=111.84 Aligned_cols=134 Identities=16% Similarity=0.121 Sum_probs=101.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH----HhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH----WLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~----~~g~~~~~v~~v~~~~~g~id 79 (448)
.++.+++|..|+..++....+ +++.|+.++..+......+. ..|+ ++..+... +
T Consensus 80 ~~~afsSGmaAI~~~~l~ll~--------------~GD~vl~~~~~YG~t~~~~~~~l~~~gi---~~~~~d~~-----~ 137 (396)
T COG0626 80 DAFAFSSGMAAISTALLALLK--------------AGDHVLLPDDLYGGTYRLFEKILQKFGV---EVTFVDPG-----D 137 (396)
T ss_pred cEEEecCcHHHHHHHHHHhcC--------------CCCEEEecCCccchHHHHHHHHHHhcCe---EEEEECCC-----C
Confidence 478888888888777666554 56777777776665544443 3344 56666543 6
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
.+.+++++.+ +++++|.+..++|++.-+.||++|+++||++|+.++||.+++...+.-+- -. ++|+++
T Consensus 138 ~~~~~~~~~~-----~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL----~~---GaDIVv 205 (396)
T COG0626 138 DEALEAAIKE-----PNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQRPL----EL---GADIVV 205 (396)
T ss_pred hHHHHHHhcc-----cCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccChh----hc---CCCEEE
Confidence 6677777653 25899999999999999999999999999999999999999877663221 11 489999
Q ss_pred ECCccccCCCCc
Q psy14299 160 WNPHKMLGAPLQ 171 (448)
Q Consensus 160 ~s~hK~l~~P~g 171 (448)
-|..|.+++...
T Consensus 206 hSaTKyl~GHsD 217 (396)
T COG0626 206 HSATKYLGGHSD 217 (396)
T ss_pred EeccccccCCcc
Confidence 999999998754
No 320
>KOG0257|consensus
Probab=99.29 E-value=3.2e-10 Score=112.21 Aligned_cols=114 Identities=14% Similarity=0.054 Sum_probs=98.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC--------CC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN--------ER 75 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~--------~~ 75 (448)
.+++|.|+.+++..+++..++ +++.|++-+....++.....+.|. ..+.++.. .+
T Consensus 95 eVlVT~GA~~ai~~~~~~l~~--------------~GDeVii~eP~fd~Y~~~~~maG~---tpv~v~~~~~~g~~~s~~ 157 (420)
T KOG0257|consen 95 EVLVTAGANEAISSALLGLLN--------------PGDEVIVFEPFFDCYIPQVVMAGG---TPVFVPLKPKEGNVSSSD 157 (420)
T ss_pred cEEEecCchHHHHHHHHHHcC--------------CCCEEEEecCcchhhhhHHhhcCC---cceeeccccccccccCcc
Confidence 588999999999989888776 677788888999999999999998 44555543 57
Q ss_pred CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccc
Q psy14299 76 GQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLI 140 (448)
Q Consensus 76 g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~ 140 (448)
+.+|+++++.++.+ +|++|+++.++|++|.+.+ |++|+++|++||.+++.|.+|-....
T Consensus 158 ~~~D~~~le~~~t~------kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~ 219 (420)
T KOG0257|consen 158 WTLDPEELESKITE------KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVY 219 (420)
T ss_pred ccCChHHHHhhccC------CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhh
Confidence 89999999999976 6999999999999997755 89999999999999999998876554
No 321
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.28 E-value=3.5e-09 Score=110.04 Aligned_cols=166 Identities=14% Similarity=0.143 Sum_probs=95.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
.++|+++||+||-.|+..||.... ..|-. ....+|......|-...-+....|.. ...+..+|...
T Consensus 108 ~v~f~~sGseA~e~AlklAr~~~~----~~g~~-~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~ 182 (442)
T PRK13360 108 HVFFTNSGSESVDTALKIALAYHR----ARGEG-SRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTL 182 (442)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHH----hcCCC-CCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCc
Confidence 478999999999999999987521 01100 01233444455554433332222210 01233344321
Q ss_pred C-CC--c----------CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccc-c
Q psy14299 75 R-GQ--M----------ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACW-G 136 (448)
Q Consensus 75 ~-g~--i----------d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~-~ 136 (448)
+ .+ + ..++|++.++.. .+..+.+|++.-.....|.+.| +++|.++|++||+++++|+++ |
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG 260 (442)
T PRK13360 183 DLARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITG 260 (442)
T ss_pred hhhccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC
Confidence 1 00 1 245777777531 1235667888878887899888 999999999999999999998 4
Q ss_pred cccccccchhhhhcCCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 137 GSLIFSEKYSFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
.|.. ...+.....++ ..|++++ .|.+++- ..+|.+..+++
T Consensus 261 ~Grt-G~~~a~~~~gv-~PDivt~--gK~l~gG~~P~gav~~~~~ 301 (442)
T PRK13360 261 FGRL-GAPFAAQYFGV-TPDLLTC--AKGLTNGAIPMGAVFVSSE 301 (442)
T ss_pred CCCC-ccchhhhhcCC-CCceeee--eeccccCccceEEEEEcHH
Confidence 4332 11111111233 3687654 8988642 23566666554
No 322
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.28 E-value=9.6e-09 Score=106.24 Aligned_cols=162 Identities=12% Similarity=0.053 Sum_probs=96.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC--------C--CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI--------G--MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~--------~--~~~v~~v~~~ 73 (448)
.++|+++||+||-.|+..||... | ...+|......|-...-+....+- + ...+..+|..
T Consensus 96 ~v~f~~sGseA~e~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (420)
T TIGR00700 96 KSVFFNSGAEAVENAVKIARSYT-------G----RPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLP 164 (420)
T ss_pred EEEEeCCcHHHHHHHHHHHHHhc-------C----CCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCC
Confidence 47999999999999999998752 1 223455555666554444433221 0 1123334432
Q ss_pred CCCC-------c----CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccc
Q psy14299 74 ERGQ-------M----ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGS 138 (448)
Q Consensus 74 ~~g~-------i----d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~ 138 (448)
...+ . +++.+++.+... ..+....+|++.-....+|...| +++|.++|++||+++++|+.+.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~ 243 (420)
T TIGR00700 165 YPYRDGLLDKQLSTDGELAAARAIFVID-VGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGF 243 (420)
T ss_pred ccccccccccchhHHHHHHHHHHHHHhh-cCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCC
Confidence 1111 1 245666665311 12235667777776666787766 999999999999999999998754
Q ss_pred cccccchhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 139 LIFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 139 ~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
......+.....++ ..|+++ ..|.+++-..+|.++.+++
T Consensus 244 gr~g~~~a~~~~~~-~pDi~~--lsK~l~~G~pig~v~~~~~ 282 (420)
T TIGR00700 244 ARTGAMFACEHEGP-EPDLIT--TAKSLADGLPLSGVTGRAE 282 (420)
T ss_pred cccchhHHHhhcCC-CCCEEE--eeccccCCcceEEEEecHH
Confidence 22111111111122 367665 6898875456777777543
No 323
>PRK06062 hypothetical protein; Provisional
Probab=99.28 E-value=1.3e-08 Score=106.15 Aligned_cols=161 Identities=16% Similarity=0.165 Sum_probs=98.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC--------CcEEEEecCCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM--------DNVIRVKTNER 75 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~--------~~v~~v~~~~~ 75 (448)
.++|+++||+|+-.|+..||... | ...+|......|-...-+....+... ..+..++.+..
T Consensus 114 ~v~f~~SGsEAve~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~ 182 (451)
T PRK06062 114 KVFFTNGGADANEHAVRMARLHT-------G----RPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFL 182 (451)
T ss_pred EEEEcCChHHHHHHHHHHHHHhh-------C----CceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCc
Confidence 47899999999999999998752 1 23344445556655444444333210 01222322211
Q ss_pred CC------cC-------HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccc
Q psy14299 76 GQ------MI-------CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGS 138 (448)
Q Consensus 76 g~------id-------~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~ 138 (448)
.+ -| ++++++.++.. .+.++.+|++.-.....|.+.| +++|.++|++||+++++|.++.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGf 260 (451)
T PRK06062 183 YRSEFHATTEEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGF 260 (451)
T ss_pred cccccCCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCC
Confidence 11 12 57777777531 1234667777777777788888 999999999999999999998853
Q ss_pred cccccchhhhhcCCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 139 LIFSEKYSFVLKGINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 139 ~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
--....+.....++ ..|++++ .|.+++-+ ..|.++.+++
T Consensus 261 GRtG~~~a~~~~gv-~PDi~t~--gK~lggG~~Pigav~~~~~ 300 (451)
T PRK06062 261 GRTGKWFAIEHFGV-VPDLITF--AKGVNSGYVPLGGVAISEA 300 (451)
T ss_pred CcCcHHHHHHhcCC-CCCeeee--chhhhcCCcCcEEEEEcHH
Confidence 11111111112244 3687764 79887632 4677777663
No 324
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.27 E-value=1.8e-08 Score=104.82 Aligned_cols=162 Identities=16% Similarity=0.122 Sum_probs=94.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC----------CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG----------MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~----------~~~v~~v~~~ 73 (448)
.++|+++||+||..|+..||... | ...+|......|-...-+..+.+.. ...+..+|.+
T Consensus 105 ~v~f~~SGseA~e~AiklAr~~t-------g----r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p 173 (445)
T PRK08593 105 RVTFGLSGSDANDGIIKFARAYT-------G----RPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFP 173 (445)
T ss_pred EEEECCchHHHHHHHHHHHHHhh-------C----CCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCC
Confidence 57899999999999999998752 1 2334555666776655555444311 0123444433
Q ss_pred CCCC-----cCH-------HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccc
Q psy14299 74 ERGQ-----MIC-------SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGG 137 (448)
Q Consensus 74 ~~g~-----id~-------e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~ 137 (448)
...+ .+. +++++.+++.. .+..+.+|++.-.....|.+.| +++|.++|++||+++++|+++.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg 252 (445)
T PRK08593 174 DKYRGMYEEPDANFVEEYLAPLKEMFEKYL-PADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQG 252 (445)
T ss_pred ccccccccCCcHHHHHHHHHHHHHHHHhhc-CCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC
Confidence 2111 122 33444343210 1235667777777777788777 99999999999999999999753
Q ss_pred ccccccchhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 138 SLIFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 138 ~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
.-.....+.....++ ..|+++ ..|.+++-...|.+..+++
T Consensus 253 ~GrtG~~~a~~~~gv-~pDi~t--~gK~l~~G~p~gav~~~~~ 292 (445)
T PRK08593 253 LGRTGKWSSISHFNI-TPDLMS--FGKSLAGGMPMSAIVGRKE 292 (445)
T ss_pred CCcCchHHHHHhcCC-CCCEee--ecccccCCcccEEEEEcHH
Confidence 211111011111133 257665 4787764344677777543
No 325
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.26 E-value=6.8e-09 Score=108.23 Aligned_cols=163 Identities=13% Similarity=0.063 Sum_probs=94.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC--------C--CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI--------G--MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~--------~--~~~v~~v~~~ 73 (448)
.++|+++||+||-.|+..||..- | ...+|-.....|-...-+..+.+. . ...+..+|.+
T Consensus 115 ~v~f~~SGsEA~e~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~ 183 (457)
T PRK05639 115 KVLFGLSGSDAVDMAIKVSKFST-------R----RPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYP 183 (457)
T ss_pred EEEEeCchHHHHHHHHHHHHHhc-------C----CCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCC
Confidence 47999999999999999998751 1 223444455566554444443331 0 1124455543
Q ss_pred CCCC--------cCHHH--------HHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEec
Q psy14299 74 ERGQ--------MICSF--------LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDA 133 (448)
Q Consensus 74 ~~g~--------id~e~--------Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~ 133 (448)
...+ -|+++ +++.+......+.+..+|++.-.....|.+.| +++|.++|++||+++++|+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DE 263 (457)
T PRK05639 184 NPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDE 263 (457)
T ss_pred ccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 2111 12332 33333211011234566777666555666554 8999999999999999999
Q ss_pred ccccccccccchhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 134 CWGGSLIFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 134 A~~~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
++.+.-....-+.....++ ..|+++ ..|.+++-.+.|.+..+++
T Consensus 264 v~tG~GrtG~~~a~~~~gv-~PDiv~--~gK~l~gG~pi~av~~~~~ 307 (457)
T PRK05639 264 VQTGIGRTGKWFASEWFEV-KPDLII--FGKGVASGMGLSGVIGRKE 307 (457)
T ss_pred hhhccCcCchHHHHHhcCC-CCCEEE--echhhcCCCcceeEEehHH
Confidence 9874211111111112234 379888 4898875566788777654
No 326
>PRK06105 aminotransferase; Provisional
Probab=99.25 E-value=6.6e-09 Score=108.49 Aligned_cols=166 Identities=19% Similarity=0.176 Sum_probs=96.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
-++|+++||+||-.|+..++.... ..|.+ ....+|......|-....+..+.+... ..+..+|.+.
T Consensus 111 ~v~f~~SGseAve~AlKlar~~~~----~~g~t-~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~ 185 (460)
T PRK06105 111 KVFFTNSGSEANDTVVKLVWYYNN----ALGRP-EKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPH 185 (460)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHH----hcCCC-CCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCc
Confidence 478999999999999999875411 11211 123345556666765544433332210 1123333221
Q ss_pred CCC-------------cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccc-
Q psy14299 75 RGQ-------------MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWG- 136 (448)
Q Consensus 75 ~g~-------------id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~- 136 (448)
..+ -..+++++.+... ...++.+|++.-.....|.+.| +++|.++|++||+++++|+.+.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG 263 (460)
T PRK06105 186 YYRFGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICG 263 (460)
T ss_pred ccccccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccC
Confidence 111 1245677776431 1234667777777777788877 9999999999999999999984
Q ss_pred cccccccchhhhhcCCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 137 GSLIFSEKYSFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
.|-. ..-+.....++ ..|++++ .|.+++- ...|.+..+++
T Consensus 264 ~GRt-G~~f~~~~~~v-~PDi~~~--gK~lggG~~P~~av~~~~~ 304 (460)
T PRK06105 264 FGRT-GNMFGCETFGI-KPDILVM--SKQLSSSYQPLSAVLMNEK 304 (460)
T ss_pred CCcC-chhhhHHhcCC-CCCeeee--ecccccCcccceEEEEcHH
Confidence 4332 11111111233 3687765 6877653 24666667553
No 327
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.25 E-value=1.4e-08 Score=105.13 Aligned_cols=154 Identities=17% Similarity=0.096 Sum_probs=99.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC----------------CcE
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM----------------DNV 67 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~----------------~~v 67 (448)
.++|+++||+||-.|+..||... | ...+|......|-...-+....+... ..+
T Consensus 111 ~v~f~~sGseA~e~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (428)
T PRK12389 111 KVRFVNSGTEAVMTTIRVARAYT-------G----RTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEV 179 (428)
T ss_pred EEEEeCCHHHHHHHHHHHHHHhh-------C----CCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCce
Confidence 47899999999999999998752 1 23345555556655444433332110 122
Q ss_pred EEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccccccc
Q psy14299 68 IRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSE 143 (448)
Q Consensus 68 ~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~ 143 (448)
..+|.+ |++.+++.+++. +..+.+|++.-.....|.+.| +++|.++|++||+++++|+.+.+. -...
T Consensus 180 ~~~~~~-----d~~~l~~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~ 250 (428)
T PRK12389 180 ITVPFN-----DIEALKEALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMY 250 (428)
T ss_pred EEcCCC-----CHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCc
Confidence 333332 789999988642 234667888777777888888 999999999999999999998865 2111
Q ss_pred chhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 144 KYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 144 ~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
.+.....++ ..|.+++ -|.+++-...|.+..+++
T Consensus 251 ~~a~~~~gv-~PDivt~--gK~lggG~Pi~av~~~~~ 284 (428)
T PRK12389 251 GGAQDLLGV-EPDLTAL--GKIIGGGLPIGAYGGRKD 284 (428)
T ss_pred chhhHHhCC-CCCeeee--chhhcCCCceeEEeEHHH
Confidence 111111233 3687654 788776455777766543
No 328
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.24 E-value=9.3e-09 Score=106.30 Aligned_cols=161 Identities=13% Similarity=0.130 Sum_probs=93.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC----------CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG----------MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~----------~~~v~~v~~~ 73 (448)
..+|+++||+|+-.|+..||... | ...+|-.....|-...-+..+.+.. ...+..++.+
T Consensus 103 ~~~f~~sGseA~e~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p 171 (421)
T PRK06777 103 KTAFFTTGAEAVENAVKIARAYT-------G----RPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYP 171 (421)
T ss_pred eEEEeCCcHHHHHHHHHHHHHhh-------C----CCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCC
Confidence 47899999999999999998752 1 2234445555665554444433310 0112233322
Q ss_pred CCC-----CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccc-ccC---HHHHHHHHHHcCCEEEEecccccccccccc
Q psy14299 74 ERG-----QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA-FDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEK 144 (448)
Q Consensus 74 ~~g-----~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~-~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~ 144 (448)
... .-+++.+++.+++.. .+..+.+|++.-.....|. +.| +++|.++|++||+++++|+++.+.-.....
T Consensus 172 ~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~ 250 (421)
T PRK06777 172 NELHGVSVEEALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKL 250 (421)
T ss_pred ccccCcCHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCch
Confidence 111 123566777775311 1234566777666666674 344 999999999999999999998753221111
Q ss_pred hhhhhcCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 145 YSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 145 ~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
+.....++ ..|++ +..|.+++-..+|.+..++
T Consensus 251 ~~~~~~~~-~pDiv--~~sK~l~~G~pigav~~~~ 282 (421)
T PRK06777 251 FAMEYYDV-KPDLI--TMAKSLGGGMPISAVVGRA 282 (421)
T ss_pred hhhhhcCC-CCCEE--eeehhhcCCCceEEEEEcH
Confidence 11111122 35765 4689887434577777754
No 329
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.24 E-value=9.1e-10 Score=111.54 Aligned_cols=157 Identities=14% Similarity=0.103 Sum_probs=97.6
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEe-------cCCCchHHH-HHHHHhCCCCCcEEEEe-----
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFT-------SEDSHYSML-KAAHWLGIGMDNVIRVK----- 71 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~-------~~~~H~s~~-~~~~~~g~~~~~v~~v~----- 71 (448)
+++|++|++++.++.....++ +++.+.+ +...|+--- -.+.+.|. .++.++
T Consensus 92 alpthqGRgaE~Il~~~~~~~-------------~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~---~~~~l~~~ea~ 155 (467)
T TIGR02617 92 TIPTHQGRGAEQIYIPVLIKK-------------REQEKGLDRSKMVAFSNYFFDTTQGHSQINGC---TARNVYTKEAF 155 (467)
T ss_pred EEECCCCchHHHHHHHhhccc-------------ccccccccccccccceEEEEecchHHHHHcCc---eeecccchhhc
Confidence 678999999999998777663 2223332 333444332 33456666 344432
Q ss_pred -----cCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCc-cc---cccCHHHHHHHHHHcCCEEEEecccccc-ccc
Q psy14299 72 -----TNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTV-LG---AFDPLDEIATVCEKYDLWMHVDACWGGS-LIF 141 (448)
Q Consensus 72 -----~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~-tG---~~~~l~~I~~ia~~~g~~l~VD~A~~~~-~~~ 141 (448)
.+.+|.+|+++|+++|++.... +...+..+..+|. -| .++.++++.++|++||+.+|+|||.-+. +.+
T Consensus 156 ~~~~~~~fkG~~dl~~le~~I~~~g~~--~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~f 233 (467)
T TIGR02617 156 DTGVRYDFKGNFDLEGLERGIEEVGPN--NVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYF 233 (467)
T ss_pred ccccCCCCCCCcCHHHHHHHHhhcCCC--CceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhh
Confidence 2346899999999999863111 1222222222233 34 3466888999999999999999998774 432
Q ss_pred ccch-----hhhhcC-----CCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 142 SEKY-----SFVLKG-----INRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 142 ~~~~-----~~~~~~-----~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
+... ...+.. .+.+|++++|..|.+++|.|+- +..+++
T Consensus 234 Ik~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvGg~-Lag~d~ 281 (467)
T TIGR02617 234 IKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMGGL-LCFKDD 281 (467)
T ss_pred hhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCcccce-EEecch
Confidence 2110 000111 1468999999999999998654 445565
No 330
>PRK07678 aminotransferase; Validated
Probab=99.24 E-value=1.6e-08 Score=105.40 Aligned_cols=166 Identities=16% Similarity=0.158 Sum_probs=94.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
.++|+++||+||-.|+..||.... ..|-+ ....+|-.....|-...-+....+.. ...+..+|.+.
T Consensus 107 ~v~f~~sGseA~e~AlklAr~~t~----~~g~~-~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (451)
T PRK07678 107 VIFFSNSGSEANETAFKIARQYHA----QKGEP-HRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPD 181 (451)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHH----hcCCC-CCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCc
Confidence 478999999999999999987521 11211 12234444555565444343332211 01233343322
Q ss_pred CCCc---------C---HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccc-
Q psy14299 75 RGQM---------I---CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGG- 137 (448)
Q Consensus 75 ~g~i---------d---~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~- 137 (448)
..+. | .+.+++.++.. .+..+.+|++.-.....|.+.| ++++.++|++||+++++|+.+.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGf 259 (451)
T PRK07678 182 CYRMPGIESEDIYDLECVKEIDRVMTWE--LSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGF 259 (451)
T ss_pred cccccccCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcC
Confidence 1111 1 22355556421 1234566777666555677655 89999999999999999998854
Q ss_pred ccccccchhhhhcCCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 138 SLIFSEKYSFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 138 ~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
|-. ...+.....++ ..|++++ -|.+++- ..+|.+.++++
T Consensus 260 GRt-G~~~~~~~~gv-~PDivt~--gK~lggG~~Pi~av~~~~~ 299 (451)
T PRK07678 260 GRT-GKAFGFMNYGV-KPDIITM--AKGITSAYLPLSATAVKKE 299 (451)
T ss_pred CcC-chhHHHHhcCC-CCCEEEe--ecccccCCcceeEEEEcHH
Confidence 331 11111111234 3788876 7887754 35788777664
No 331
>KOG0634|consensus
Probab=99.24 E-value=9.2e-09 Score=102.09 Aligned_cols=122 Identities=20% Similarity=0.184 Sum_probs=98.7
Q ss_pred CccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 2 NLKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 2 ~~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
|++.++|+|.|.+...++.+++++ ++.|++...+..+-....+..|+ +++.|+.|.+| +++|
T Consensus 124 ~wdiiit~G~t~~l~~~l~~~~N~--------------gd~vlie~~ty~~AL~s~~a~gv---~~ipv~md~~G-i~pE 185 (472)
T KOG0634|consen 124 NWDIIITNGNTDGLFKVLRTLINR--------------GDHVLIEEYTYPSALQSMEALGV---KIIPVKMDQDG-IDPE 185 (472)
T ss_pred CceEEEecCCchHHHHHHHHhhcC--------------CCceEEecccchHHHHhccccCc---eEEeccccCCC-CCHH
Confidence 568899999999999999998884 56799999999999999998887 78888887555 7999
Q ss_pred HHHHHHHHhhhc---CCCcEEE-EEeccCCccccccCH---HHHHHHHHHcCCEEEEeccccccccc
Q psy14299 82 FLEQTIQTSLAE---KKIPLFV-NATAGTTVLGAFDPL---DEIATVCEKYDLWMHVDACWGGSLIF 141 (448)
Q Consensus 82 ~Le~~l~~~~~~---~~~~~lV-v~~~~~t~tG~~~~l---~~I~~ia~~~g~~l~VD~A~~~~~~~ 141 (448)
.|++.+....-. .++|.++ .+-.+.|+||..-.+ ++|.++||+|++.++-|.-|....+.
T Consensus 186 ~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~ 252 (472)
T KOG0634|consen 186 SLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMN 252 (472)
T ss_pred HHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeecc
Confidence 999999865433 1235443 445678899977665 67999999999999999988876653
No 332
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.23 E-value=6.6e-09 Score=107.55 Aligned_cols=154 Identities=14% Similarity=0.118 Sum_probs=92.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHH---HHHHHHhCCC--C-----------CcE
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSM---LKAAHWLGIG--M-----------DNV 67 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~---~~~~~~~g~~--~-----------~~v 67 (448)
.++|+++||+|+..|+..||..- | ...+|-.....|-.. ..+....+-. . ...
T Consensus 112 ~v~f~~SGsEA~e~AiklAr~~t-------g----r~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (433)
T PRK00615 112 KIRFVSSGTEATMTAVRLARGIT-------G----RSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLT 180 (433)
T ss_pred EEEEeCchHHHHHHHHHHHHHhh-------C----CCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCe
Confidence 57999999999999999998752 1 222333344445422 1111111100 0 001
Q ss_pred EEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCH----HHHHHHHHHcCCEEEEeccccccccccc
Q psy14299 68 IRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPL----DEIATVCEKYDLWMHVDACWGGSLIFSE 143 (448)
Q Consensus 68 ~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l----~~I~~ia~~~g~~l~VD~A~~~~~~~~~ 143 (448)
..++.+ |++++++.+++. +.++.+|++.-...+.|.+.|. ++|.++|++||+++++|+++.+. -...
T Consensus 181 ~~~~~~-----d~~~l~~~l~~~---~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~ 251 (433)
T PRK00615 181 LSLPYN-----DFQIFQTVMNSL---GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQ 251 (433)
T ss_pred EeCCCC-----CHHHHHHHHHhc---CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccH
Confidence 111221 789999998642 2346678888777878888774 59999999999999999998532 2111
Q ss_pred chhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 144 KYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 144 ~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
.+.....++ ..|+++ ..|.+++-...|++..+++
T Consensus 252 ~ga~~~~gv-~PDi~~--~gK~lggG~p~~av~~~~~ 285 (433)
T PRK00615 252 GGAAAIYHV-KPDITV--YGKILGGGLPAAAVVAHKS 285 (433)
T ss_pred hHHHHhcCC-CCCeEE--EcccccCCcceeeeeecHH
Confidence 111111233 368776 5898874344666666554
No 333
>PLN00144 acetylornithine transaminase
Probab=99.23 E-value=6.9e-09 Score=105.95 Aligned_cols=160 Identities=18% Similarity=0.113 Sum_probs=95.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCC------CCeEEEecCCCchHHHHHHHHhCCC---------CCcEE
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHL------PPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVI 68 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~------~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~ 68 (448)
.++|+++||+|+-.|+..+|.... +.|.... ...+|.+....|-...-+....+-. ...+.
T Consensus 74 ~v~f~~sGseA~e~AlklAr~~~~----~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~ 149 (382)
T PLN00144 74 RVFFCNSGTEANEAAIKFARKYQR----VRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVT 149 (382)
T ss_pred eEEEeCCcHHHHHHHHHHHHHHHh----ccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeE
Confidence 478999999999999999986521 1111000 1234555556665544444433321 01123
Q ss_pred EEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc--cC--HHHHHHHHHHcCCEEEEecccccccccccc
Q psy14299 69 RVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF--DP--LDEIATVCEKYDLWMHVDACWGGSLIFSEK 144 (448)
Q Consensus 69 ~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~--~~--l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~ 144 (448)
.+|.+ |++.+++.+++ .++.+|++.-..++.|.. .+ +++|.++|++||+++++|+++.+.......
T Consensus 150 ~~~~~-----d~~~l~~~~~~-----~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~ 219 (382)
T PLN00144 150 FVEYG-----NLEAARKLIQK-----GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYL 219 (382)
T ss_pred EeCCC-----CHHHHHHhcCC-----CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchH
Confidence 33332 78999988843 246677776555554443 33 899999999999999999998754221111
Q ss_pred hhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 145 YSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 145 ~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
+.....++ ..| +.+..|.+++-..+|+++.+++
T Consensus 220 ~~~~~~~~-~PD--i~t~sK~l~~G~pig~v~~~~~ 252 (382)
T PLN00144 220 WAHEAYGV-EPD--IMTLAKPLAGGLPIGAVLVTEK 252 (382)
T ss_pred hhhhhcCC-CCC--EEEecccccCCcceEEEEEcHH
Confidence 11112233 257 4455898875566788777543
No 334
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.23 E-value=1.3e-08 Score=105.86 Aligned_cols=162 Identities=21% Similarity=0.129 Sum_probs=92.7
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCCC
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNER 75 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~~ 75 (448)
.+++++|||||-.|+..||..- | ...+|......|-...-+....+.. ...+..+|.+..
T Consensus 105 ~f~~~sGsEA~e~AlklAr~~t-------g----r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~ 173 (442)
T TIGR00709 105 QFPGPSGADAVEAAIKLAKTYT-------G----RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHE 173 (442)
T ss_pred EEeCCCHHHHHHHHHHHHHHhc-------C----CCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCcc
Confidence 3456999999999999999751 1 2334555666676655555444310 112333443221
Q ss_pred CCc--------CHHHHHHHHHHhhh----cCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccc
Q psy14299 76 GQM--------ICSFLEQTIQTSLA----EKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSL 139 (448)
Q Consensus 76 g~i--------d~e~Le~~l~~~~~----~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~ 139 (448)
.+. +.+.+.+.+++..+ ....+..|++.-.....|.+.| +++|.++|++||+++++|+.+.+.-
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfG 253 (442)
T TIGR00709 174 YRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFG 253 (442)
T ss_pred ccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 111 12223232222211 1124566777666666665533 8999999999999999999877532
Q ss_pred ccccchhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 140 IFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 140 ~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
.....+.....++ ..|.+++ .|.+++-...|.+..+++
T Consensus 254 RtG~~~a~~~~gv-~PDiv~~--gK~l~~G~Pigav~~~~~ 291 (442)
T TIGR00709 254 RSGTMFAFEHAGI-EPDFVVM--SKAVGGGLPLAVLLIAPE 291 (442)
T ss_pred CCCchhHHHHcCC-CCcEEEE--cccccCCcccEEEEEchH
Confidence 2221111111233 3688884 787766456788777654
No 335
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.22 E-value=1.8e-08 Score=105.26 Aligned_cols=154 Identities=13% Similarity=0.027 Sum_probs=95.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHh-------------CCC---CCcE
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWL-------------GIG---MDNV 67 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~-------------g~~---~~~v 67 (448)
.+.|+++||||+..|+..||..-. ...+|-.....|-......... |+. ...+
T Consensus 157 ~v~f~~SGsEA~e~AlklAR~~tg-----------r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 225 (474)
T PLN02482 157 MVRFVNSGTEACMGVLRLARAYTG-----------REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSAT 225 (474)
T ss_pred EEEEeCChHHHHHHHHHHHHHhcC-----------CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCe
Confidence 478999999999999999987521 2223434444554221111100 110 0012
Q ss_pred EEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccccccc
Q psy14299 68 IRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSE 143 (448)
Q Consensus 68 ~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~ 143 (448)
..+|.+ |++++++.+++. +..+.+|++.-...+.|.+.| +++|.++|++||+++++|+++.+. ....
T Consensus 226 ~~~~~n-----d~~~l~~~l~~~---~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~ 296 (474)
T PLN02482 226 LTAPYN-----DLEAVKKLFEAN---KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAY 296 (474)
T ss_pred EEecCC-----ChHHHHHHHHhC---CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCc
Confidence 333433 789999998642 235667888777777887777 568999999999999999998643 2211
Q ss_pred chhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 144 KYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 144 ~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
.+.....++ ..|.+++ -|.+++-..+|.+..+++
T Consensus 297 ~ga~~~~gv-~PDi~t~--gK~lggG~Pigav~g~~e 330 (474)
T PLN02482 297 GGAQEYFGI-TPDLTTL--GKVIGGGLPVGAYGGRRE 330 (474)
T ss_pred chHhHHhCC-CCCEEEe--cchhhCCCceEEEEEcHH
Confidence 111111233 3687655 798876455788766543
No 336
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.22 E-value=1.1e-08 Score=106.51 Aligned_cols=166 Identities=14% Similarity=0.137 Sum_probs=92.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
.++|+++||+|+-.|+..+|.... +.|-+ ....+|......|-...-+....|.. ...+..+|.+.
T Consensus 111 ~v~f~~sGseAve~AlklAr~~~~----~~g~~-~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (445)
T PRK09221 111 HVFFTNSGSESVDTALKIALAYHR----ARGQG-TRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTL 185 (445)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHH----hcCCC-CCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCc
Confidence 478999999999999999987521 01111 12234445555564433322222210 01133343321
Q ss_pred -C----CC--------cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccc
Q psy14299 75 -R----GQ--------MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGG 137 (448)
Q Consensus 75 -~----g~--------id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~ 137 (448)
. .. -..+++++.++.. ...++.+|++.-.....|.+.| +++|.++|++||+++++|+++.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG 263 (445)
T PRK09221 186 DLPENAFSKGQPEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITG 263 (445)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhC
Confidence 0 00 0135677766531 1135667888888888899888 99999999999999999999853
Q ss_pred -ccccccchhhhhcCCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 138 -SLIFSEKYSFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 138 -~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
|-. ...+.....++ ..|++++ .|.+++- ...|.+..+++
T Consensus 264 ~GRt-G~~~~~~~~gv-~PDi~~~--gK~l~gG~~Pi~av~~~~~ 304 (445)
T PRK09221 264 FGRL-GAAFAAERFGV-TPDIITF--AKGLTNGAIPMGAVIASDE 304 (445)
T ss_pred CCcC-chhhHHHhcCC-CCCEEEe--ccccccCcccceeeEEcHH
Confidence 221 11111111233 2587665 5766431 12555666543
No 337
>PRK06149 hypothetical protein; Provisional
Probab=99.22 E-value=1.2e-08 Score=115.54 Aligned_cols=162 Identities=14% Similarity=0.048 Sum_probs=98.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC----------CCCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI----------GMDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~----------~~~~v~~v~~~ 73 (448)
.++|+++||+||..|+..||... | ...+|.+....|-...-+....+. ....+..++..
T Consensus 643 ~v~f~~SGsEA~e~AlklAr~~t-------g----r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p 711 (972)
T PRK06149 643 TVFLVNSGSEANDLAIRLAWAAS-------G----RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESP 711 (972)
T ss_pred EEEEeCCchHHHHHHHHHHHHhc-------C----CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCC
Confidence 57999999999999999998752 1 344566666777433222111110 00113334332
Q ss_pred CCCC--c---C-----HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccc-ccc
Q psy14299 74 ERGQ--M---I-----CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACW-GGS 138 (448)
Q Consensus 74 ~~g~--i---d-----~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~-~~~ 138 (448)
...+ . + .+++++.++.....+.++.+|++.-.....|.+.| +++|.++|++||+++++|+++ |.|
T Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfG 791 (972)
T PRK06149 712 NTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYG 791 (972)
T ss_pred cccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCC
Confidence 2111 1 2 35666666543333445667777777777788888 999999999999999999998 443
Q ss_pred cccccc-hhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 139 LIFSEK-YSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 139 ~~~~~~-~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
-. ... +.....++ ..|++++ .|.+++-...|++.++++
T Consensus 792 Rt-G~~~~a~e~~gv-~PDivt~--gK~lg~G~Pl~av~~~~~ 830 (972)
T PRK06149 792 RL-GHYFWGFEQQGV-VPDIITM--AKGMGNGHPLGAVITRRE 830 (972)
T ss_pred cc-CccchhhhhcCC-CCCEEEe--cccccCCeeeEEEEEcHH
Confidence 32 110 11111234 3788865 788876455788877664
No 338
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.22 E-value=5.8e-09 Score=107.97 Aligned_cols=166 Identities=14% Similarity=0.089 Sum_probs=91.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC----------CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG----------MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~----------~~~v~~v~~~ 73 (448)
.++|+++||+|+-.|+..++.... ..|.+ ....+|......|-...-+..+.+.. ...+..++..
T Consensus 107 ~v~f~~sGseA~e~AlklAr~~~~----~~~~~-~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p 181 (427)
T TIGR00508 107 CVFLADSGSVAVEVALKMALQYWQ----AKGEK-NRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAP 181 (427)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHH----hhCCC-CccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCC
Confidence 578999999999999999987521 01111 12345666666775544333332210 0011222221
Q ss_pred CC-C-----CcCHHHHHHHHHHhhhcCCCcEEEEEecc-CCccc----cccCHHHHHHHHHHcCCEEEEecccccccccc
Q psy14299 74 ER-G-----QMICSFLEQTIQTSLAEKKIPLFVNATAG-TTVLG----AFDPLDEIATVCEKYDLWMHVDACWGGSLIFS 142 (448)
Q Consensus 74 ~~-g-----~id~e~Le~~l~~~~~~~~~~~lVv~~~~-~t~tG----~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~ 142 (448)
.. . .-|++++++.+.+. +....+|++.-. ....| ...++++|.++|++||+.+++|++|.+.-...
T Consensus 182 ~~~~~~~~~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G 258 (427)
T TIGR00508 182 QNRFDEEWNEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTG 258 (427)
T ss_pred CccccchhHHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC
Confidence 11 0 11467777777542 224455666554 33333 34679999999999999999999984321111
Q ss_pred cchhhhhcCCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 143 EKYSFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 143 ~~~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
..+.....++ ..|+++ ..|.+++- ..++.+..+++
T Consensus 259 ~~~~~~~~~v-~pDi~~--~gK~l~gG~~p~~a~~~~~~ 294 (427)
T TIGR00508 259 KLFACEHAGV-VPDILC--VGKALTGGYMTLSATVTTDK 294 (427)
T ss_pred ccchhhhcCC-CCCEEE--echhhhcCcccceEEEEcHH
Confidence 1111111233 368776 48887543 23555555443
No 339
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.21 E-value=8.9e-09 Score=106.57 Aligned_cols=165 Identities=14% Similarity=0.092 Sum_probs=90.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhC--------CC--CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLG--------IG--MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g--------~~--~~~v~~v~~~ 73 (448)
.++|+++||+||-.|+..+|.... +.|-+ ....+|......|-...-+....+ .+ ...+..+|.+
T Consensus 106 ~v~f~~sGseAve~AlklAr~~~~----~~g~~-~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p 180 (429)
T PRK06173 106 KIFFADSGSVAVEVAMKMALQYQQ----AKGEV-QRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQP 180 (429)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHH----HhCCC-CCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCC
Confidence 578999999999999999986421 11211 122344455556654322222211 00 0112333322
Q ss_pred CCC------CcCHHHHHHHHHHhhhcCCCcEEEEEecc-CCccccccC----HHHHHHHHHHcCCEEEEecccccccccc
Q psy14299 74 ERG------QMICSFLEQTIQTSLAEKKIPLFVNATAG-TTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFS 142 (448)
Q Consensus 74 ~~g------~id~e~Le~~l~~~~~~~~~~~lVv~~~~-~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~ 142 (448)
... .-+++.|++.++. .+.++.+|++.-. ....|.+.| +++|.++|++||+++++|.+|.+ .-..
T Consensus 181 ~~~~~~~~~~~~l~~l~~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG-~Grt 256 (429)
T PRK06173 181 SIKFGEEWNDEAIEPLQDLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATG-FGRT 256 (429)
T ss_pred CcccchhHHHHHHHHHHHHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcC-CCcC
Confidence 110 1145667777753 2234555666543 454565533 89999999999999999999854 2211
Q ss_pred cc-hhhhhcCCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 143 EK-YSFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 143 ~~-~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
.. +.....++ ..|+++ ..|.+++- ..++.++.+++
T Consensus 257 G~~~a~~~~gv-~PDiv~--~gK~l~gG~~p~~a~~~~~~ 293 (429)
T PRK06173 257 GKLFALEHAGV-VPDIMC--IGKALTGGYLTLSATITTEA 293 (429)
T ss_pred CcchHHHhcCC-CCCEEE--eehhhhCCccccceEEecHH
Confidence 11 11111233 368777 58887543 24566666553
No 340
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.20 E-value=5.3e-08 Score=100.74 Aligned_cols=162 Identities=12% Similarity=0.131 Sum_probs=93.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC--------C--CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI--------G--MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~--------~--~~~v~~v~~~ 73 (448)
.++|+++||+||-.|+..||..- | ...+|-.....|-...-+..+.+. + ...+..+|.+
T Consensus 103 ~v~f~~SGseA~e~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (425)
T PRK07495 103 KTIFVTTGAEAVENAVKIARAAT-------G----RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFP 171 (425)
T ss_pred EEEECCchHHHHHHHHHHHHHhh-------C----CCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCC
Confidence 57999999999999999998751 1 223444555566554333332221 0 1134455543
Q ss_pred CCC-CcC----HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccc
Q psy14299 74 ERG-QMI----CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEK 144 (448)
Q Consensus 74 ~~g-~id----~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~ 144 (448)
.+. .++ .+++++.++.. ..+.++.+|++.-.....|.+.+ +++|.++|++||+++++|+++.+.-.....
T Consensus 172 ~~~~g~~~~~~~~~l~~~~~~~-~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~ 250 (425)
T PRK07495 172 VELHGVSVEQSLAALDKLFKAD-VDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKL 250 (425)
T ss_pred cccccccHHHHHHHHHHHHHhc-cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCc
Confidence 221 123 34446655421 01234667777666665675533 899999999999999999998743221111
Q ss_pred hhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 145 YSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 145 ~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
+.....++ ..|++++ .|.+++-..+|.+..+++
T Consensus 251 ~a~~~~gv-~pDi~tl--sK~l~~G~pigav~~~~~ 283 (425)
T PRK07495 251 FAMEHHEV-AADLTTM--AKGLAGGFPLAAVTGRAE 283 (425)
T ss_pred eeecccCC-CCCEEee--hhhhcCCccceEEEEcHH
Confidence 11111122 2566554 788775455777777553
No 341
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.17 E-value=3.8e-08 Score=101.77 Aligned_cols=162 Identities=15% Similarity=0.112 Sum_probs=97.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC--------C--CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI--------G--MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~--------~--~~~v~~v~~~ 73 (448)
..+|+++||+||-.|+..||..- | ...+|......|-...-+....+. + ...+..+|.+
T Consensus 103 ~~~f~~sGseA~e~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p 171 (421)
T PRK09792 103 KTAFFTTGAEAVENAVKIARAHT-------G----RPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYP 171 (421)
T ss_pred eEEEeCChHHHHHHHHHHHHHhc-------C----CCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCC
Confidence 57899999999999999998641 1 223444555566554433333221 0 0123444443
Q ss_pred CCC-Cc----CHHHHHHHHHHhhhcCCCcEEEEEeccCCcccccc-C---HHHHHHHHHHcCCEEEEecccccccccccc
Q psy14299 74 ERG-QM----ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFD-P---LDEIATVCEKYDLWMHVDACWGGSLIFSEK 144 (448)
Q Consensus 74 ~~g-~i----d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~-~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~ 144 (448)
.+. .+ +.+.+++.+++.. .+.++.+|++.-..+++|... | +++|.++|++||+++++|+.+.+.......
T Consensus 172 ~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~ 250 (421)
T PRK09792 172 SDLHGISTQDSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL 250 (421)
T ss_pred cccccccHHHHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch
Confidence 221 12 3467777775310 123567888887777788654 5 999999999999999999987764222111
Q ss_pred hhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 145 YSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 145 ~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
+.....++ ..|.+ +..|.+++-..+|.++.+++
T Consensus 251 ~a~~~~~~-~pDi~--t~gK~l~~G~pigav~~~~~ 283 (421)
T PRK09792 251 FAMDHYAD-KPDLM--TMAKSLAGGMPLSGVVGNAN 283 (421)
T ss_pred hHHHhcCC-CCcEE--EeehhhcCCCceEEEEEcHH
Confidence 11111122 35754 45898875566788776543
No 342
>PRK07480 putative aminotransferase; Validated
Probab=99.16 E-value=6.8e-08 Score=100.81 Aligned_cols=167 Identities=18% Similarity=0.167 Sum_probs=91.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
.++|+++||+|+-.|+..+|.... ..|.+ ....+|-.....|-...-+....|.. ...+..++.+.
T Consensus 113 ~v~f~~SGseA~e~AlklAr~~~~----~~g~~-~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~ 187 (456)
T PRK07480 113 HVFFTNSGSEANDTVLRMVRHYWA----LKGKP-QKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPY 187 (456)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHH----hcCCC-CCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCc
Confidence 578999999999999999987421 11211 11223444445565443333332211 11122233211
Q ss_pred CC----CcC--------HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccc
Q psy14299 75 RG----QMI--------CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGS 138 (448)
Q Consensus 75 ~g----~id--------~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~ 138 (448)
.. ..+ ++.+++.+.+ ..+.++.+|++.-.....|.+.| +++|.++|++||+.+++|+.+.+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGf 265 (456)
T PRK07480 188 WFGEGGDMTPEEFGLAAARQLEAKILE--LGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGF 265 (456)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHh--cCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 10 011 2555554432 11234566777666666677766 999999999999999999988543
Q ss_pred cccccchhhhhcCCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 139 LIFSEKYSFVLKGINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 139 ~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
--....+.....++ ..|++++ .|.+++-+ .+|.++.+++
T Consensus 266 GRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~ 305 (456)
T PRK07480 266 GRTGEWFGSQHFGI-KPDLMTI--AKGLTSGYIPMGAVGVGDR 305 (456)
T ss_pred CcCcchhhhhhcCC-CCCeeee--ehhhccCCccceEEEEcHH
Confidence 11111111111233 3687765 78776532 3677777654
No 343
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.16 E-value=2.3e-08 Score=104.44 Aligned_cols=162 Identities=17% Similarity=0.147 Sum_probs=95.2
Q ss_pred EEEe-CcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC-------C--CCcEEEEecCC
Q psy14299 5 PFLL-PGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI-------G--MDNVIRVKTNE 74 (448)
Q Consensus 5 g~~t-~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~-------~--~~~v~~v~~~~ 74 (448)
.+|+ ++||+|+-.|+..||..- | ...+|......|-...-+..+.+. + ...+..+|.+.
T Consensus 129 v~f~~~SGSEAve~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~ 197 (464)
T PRK06938 129 IQFCGPTGTDAVEAALKLVKTAT-------G----RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPY 197 (464)
T ss_pred EEEeCCCcHHHHHHHHHHHHHhh-------C----CCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCc
Confidence 4565 799999999999998751 1 233455555566554444443321 0 01244555432
Q ss_pred CCC------------cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccc
Q psy14299 75 RGQ------------MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGS 138 (448)
Q Consensus 75 ~g~------------id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~ 138 (448)
+.+ .+.+.+++.+++.......+.+|++.-.-...|.+.| ++++.++|++||+++++|+.+.+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGf 277 (464)
T PRK06938 198 DYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGF 277 (464)
T ss_pred cccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 211 1356778877542111124556666655555566544 899999999999999999987653
Q ss_pred cccccchhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 139 LIFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 139 ~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
--...-+.....++ ..|++++ -|.+++-..+|.++.+++
T Consensus 278 GRtG~~~a~e~~gv-~PDiv~~--gKglggG~PlsAv~~~~~ 316 (464)
T PRK06938 278 GRTGKMFAFEHAGI-IPDVVVL--SKAIGGSLPLAVVVYREW 316 (464)
T ss_pred CcCcHHHHHHhcCC-CCCEEEe--eccccCCCceEEEeehhH
Confidence 21111111111233 3688887 687766566888877654
No 344
>PRK07036 hypothetical protein; Provisional
Probab=99.15 E-value=4.5e-08 Score=102.39 Aligned_cols=167 Identities=18% Similarity=0.213 Sum_probs=93.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.++|+++||+||-.|+..||.... ..|-+ ....+|......|-...-+....+... ..+..+|.+.
T Consensus 114 ~v~f~~sGseAve~AlklAr~~~~----~~g~t-~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~ 188 (466)
T PRK07036 114 HVFLTTGGSTAVDSALRFVHYYFN----VRGRP-AKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPN 188 (466)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHH----hcCCC-CccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCc
Confidence 479999999999999999986421 11211 122344445555654433333322110 1133333321
Q ss_pred C----CCcC--------HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccc
Q psy14299 75 R----GQMI--------CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGS 138 (448)
Q Consensus 75 ~----g~id--------~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~ 138 (448)
. ..++ .+.+++.+.. ..+..+.+|++.-.....|.+.| +++|.++|++||+++++|+.+.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGf 266 (466)
T PRK07036 189 PYRRPAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGF 266 (466)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCC
Confidence 1 1111 2344454532 12235667777777776788777 999999999999999999987543
Q ss_pred cccccchhhh-hcCCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 139 LIFSEKYSFV-LKGINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 139 ~~~~~~~~~~-~~~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
--....+... ..++ ..|++++ .|.+++-+ .+|.+..+++
T Consensus 267 GRtG~~~~~~~~~gv-~PDivt~--gK~l~gG~~Pi~av~~~~~ 307 (466)
T PRK07036 267 GRLGHFFASEAVFGI-QPDIITF--AKGLTSGYQPLGAVIISER 307 (466)
T ss_pred CcCchhhhhhhhcCC-CCCEEEE--ccccccCccccEEEEEcHH
Confidence 1111111110 1233 3688776 78776532 4777777654
No 345
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.15 E-value=2.3e-08 Score=103.64 Aligned_cols=157 Identities=11% Similarity=0.112 Sum_probs=84.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCC-CCCeEEEecCCCchHHHHHHHHhCCCCCc--EE------EEecC-
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSH-LPPLCMFTSEDSHYSMLKAAHWLGIGMDN--VI------RVKTN- 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~-~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~--v~------~v~~~- 73 (448)
.++|+++||+||-.|+..||....+..+..|-+. ....+|-.....|-...-+....|..... .. .++..
T Consensus 105 ~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~ 184 (431)
T TIGR03251 105 HLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPK 184 (431)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCc
Confidence 4689999999999999999865211001112110 01234555555665554444443321000 00 01110
Q ss_pred ------CCC-C-------cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc----cCHHHHHHHHHHcCCEEEEeccc
Q psy14299 74 ------ERG-Q-------MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF----DPLDEIATVCEKYDLWMHVDACW 135 (448)
Q Consensus 74 ------~~g-~-------id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~----~~l~~I~~ia~~~g~~l~VD~A~ 135 (448)
... . -+++++++.+.. .+..+.+|++.-.....|.+ ..+++|.++|++||+.+++|+.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~ 261 (431)
T TIGR03251 185 LTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQ 261 (431)
T ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecch
Confidence 000 0 123344455542 23457778887777767765 35999999999999999999998
Q ss_pred ccccccccchhhhhcCCCCccEEEECCcccc
Q psy14299 136 GGSLIFSEKYSFVLKGINRANSVSWNPHKML 166 (448)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l 166 (448)
.+.-.....+.....++ ..|++++ .|.+
T Consensus 262 tG~GrtG~~~a~~~~gv-~PDi~~~--gK~~ 289 (431)
T TIGR03251 262 TGVGLTGTAWAYQQLGV-QPDIVAF--GKKT 289 (431)
T ss_pred hccCccchHHHHHhcCC-CCCEEEe--cccC
Confidence 74322111111111233 3788876 4544
No 346
>KOG1358|consensus
Probab=99.14 E-value=8.4e-09 Score=101.03 Aligned_cols=274 Identities=15% Similarity=0.138 Sum_probs=176.4
Q ss_pred CCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhh----hcCCC---cEEEEEeccCCcccc
Q psy14299 39 PPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSL----AEKKI---PLFVNATAGTTVLGA 111 (448)
Q Consensus 39 ~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~----~~~~~---~~lVv~~~~~t~tG~ 111 (448)
.+++|++++..+..+.++.++..- .+....++ |+++|++.+.+.. +..++ .+.+++....-++|.
T Consensus 177 rGDIi~~de~~nfaIq~GlqlSRS---~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~ 248 (467)
T KOG1358|consen 177 RGDIIFVDEAVNFAIQKGLQLSRS---TISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGD 248 (467)
T ss_pred cCcEEEEehhhhHHHHHHHhhhhh---eeEEecCC-----CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCc
Confidence 467899999999999999887665 67788877 8999988875321 11221 457888888999999
Q ss_pred ccCHHHHHHHHHHcCCEEEEecccccccccc------cchhhhhcCCCCccEEEECCccccCCCCceEEEEEeccchhhh
Q psy14299 112 FDPLDEIATVCEKYDLWMHVDACWGGSLIFS------EKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQ 185 (448)
Q Consensus 112 ~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~------~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~ 185 (448)
+-|+.+|.++..+|...+++|..++.|.+-- .+.. -.+..+|.++.+.--.+. +.|.+.+.+.-+...
T Consensus 249 i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~---v~~~~iDiv~~sm~~ala---s~GgFc~G~~~i~~h 322 (467)
T KOG1358|consen 249 ICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFG---VPITDIDIVTASMETALA---SGGGFCAGKSFIADH 322 (467)
T ss_pred ccccHHHHHHHhhheEEEEEecccccccccccCccccccCC---CCccceeeeeeccccccc---ccCceeecceeeEee
Confidence 9999999999999999999999988876622 1111 123458999988876554 345555554333333
Q ss_pred hccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhh
Q psy14299 186 ANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLH 265 (448)
Q Consensus 186 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (448)
..-.+.+|.++.+.+ +. +...+...+.. +++
T Consensus 323 QrLSg~~Y~fSAslP-------------------p~-----la~aa~~ai~i-~~~------------------------ 353 (467)
T KOG1358|consen 323 QRLSGSGYCFSASLP-------------------PY-----LAGAAIKAILI-EEW------------------------ 353 (467)
T ss_pred eeccccceeeeccCc-------------------hh-----hhhhHHHHHHH-Hhh------------------------
Confidence 223455676654421 00 00011111100 000
Q ss_pred hhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEecc
Q psy14299 266 QANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIP 345 (448)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~ 345 (448)
-..+.+........+.+.|+...++++. +
T Consensus 354 --------------------------------------------------~p~~~~~L~~k~~~~H~~l~~~s~~~v~-~ 382 (467)
T KOG1358|consen 354 --------------------------------------------------NPEIVQPLRAKVAKFHAALSSNSGFIVS-G 382 (467)
T ss_pred --------------------------------------------------CcchhhhhhccccccchhhhcCCceEEe-c
Confidence 0112233444456677888888889988 7
Q ss_pred CCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCC--c-ccccEEEEEecCCCCCCHHHH
Q psy14299 346 EFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQH--R-NLHNFFRLVTTCHPASSRQDM 422 (448)
Q Consensus 346 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g--~-~~~~~lRis~~~~~~~t~edi 422 (448)
.+.++++-+.+.++... . +.-.++..++.++.+.++..+..-....+ + ..+..+|+++ +...++||+
T Consensus 383 ~~~SPi~hl~l~~~~~s-----~---e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~--~a~~seeel 452 (467)
T KOG1358|consen 383 SPESPIIHLQLERSYGS-----R---EKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICV--SAGMSEEEL 452 (467)
T ss_pred CcCCceeeeeecccccc-----h---HHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEE--eCCCCHHHH
Confidence 88888888877643221 0 11123445777877777755443322211 1 1235799999 789999999
Q ss_pred HHHHHHHHHHHHHh
Q psy14299 423 DYAIDQIELRGAEV 436 (448)
Q Consensus 423 d~l~~al~~~~~~~ 436 (448)
+++.+.|++.+..+
T Consensus 453 ~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 453 ERAAELIKEVASAV 466 (467)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999987653
No 347
>PRK06917 hypothetical protein; Provisional
Probab=99.14 E-value=2.1e-07 Score=96.94 Aligned_cols=167 Identities=16% Similarity=0.163 Sum_probs=89.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.++|+++||+|+-.|+..||.... ++|.+ ....++-.....|-...-+....+... ..+..+|.+.
T Consensus 93 ~v~f~~sGsEAve~AlklAr~~~~----~rg~t-~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~ 167 (447)
T PRK06917 93 WSFFVNSGSEANETAMKIAIQHFQ----ERGIQ-GKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPY 167 (447)
T ss_pred EEEEeCChHHHHHHHHHHHHHHHH----hcCCC-CCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCc
Confidence 478999999999999999987521 11222 122334444455654444434333210 0122222211
Q ss_pred CCC------------cCHHHHHHHHHHhhhcCCCcEEEEEeccCCcc-ccccC----HHHHHHHHHHcCCEEEEeccccc
Q psy14299 75 RGQ------------MICSFLEQTIQTSLAEKKIPLFVNATAGTTVL-GAFDP----LDEIATVCEKYDLWMHVDACWGG 137 (448)
Q Consensus 75 ~g~------------id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~t-G~~~~----l~~I~~ia~~~g~~l~VD~A~~~ 137 (448)
..+ -+.+.+++.+++. .+..+.+|++.-..... |.+.| +++|.++|++||+++++|+.+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tG 245 (447)
T PRK06917 168 CYRCPVQKVYPTCQLACATELETAIERI--GAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTG 245 (447)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhC
Confidence 111 0235666666531 11235556665444323 44433 89999999999999999998774
Q ss_pred ccccccchhhhhcCCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 138 SLIFSEKYSFVLKGINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 138 ~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
.--....+.....++ ..|.+++ .|.+++-+ ..|.+..+++
T Consensus 246 fGRtG~~~a~~~~gv-~PDi~~~--gK~l~~G~~Pi~a~~~~~~ 286 (447)
T PRK06917 246 LGRTGAMFAMEHWGV-EPDIMTL--GKGLGAGYTPIAATVVSDR 286 (447)
T ss_pred cCcccchhhHHhcCC-CCCEEEe--eehhccCCcceEEEEEcHH
Confidence 211111111111233 3688765 78877533 4677777653
No 348
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.14 E-value=6.6e-08 Score=100.94 Aligned_cols=159 Identities=19% Similarity=0.174 Sum_probs=94.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.++|+++||+|+-.|+..+|... | ...+|......|-....+....+... ..+..+|...
T Consensus 132 ~v~f~~sGseAve~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (459)
T PRK06082 132 RVLFAPGGTSAIGMALKLARHIT-------G----NFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAV 200 (459)
T ss_pred EEEECCCcHHHHHHHHHHHHHhc-------C----CCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCc
Confidence 57899999999999999998751 1 23355556667776655555443210 0123333221
Q ss_pred CCC-----c------CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccc
Q psy14299 75 RGQ-----M------ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLI 140 (448)
Q Consensus 75 ~g~-----i------d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~ 140 (448)
..+ . +++.+++.+++ ...+.+|++.-.....+.+.| +++|.++|++||+++++|+++.+.-.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~l~~~i~~----~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GR 276 (459)
T PRK06082 201 SYRGAFPDADGSDVHYADYLEYVIEK----EGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGR 276 (459)
T ss_pred ccccccCChhHHHHHHHHHHHHHHhc----CCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCc
Confidence 111 1 13456666643 124556666555444333445 89999999999999999999875311
Q ss_pred cccchhhhhcCCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 141 FSEKYSFVLKGINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 141 ~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
...-+.....++ ..|+++ ..|.+++-. ..|.+..+++
T Consensus 277 tG~~fa~e~~gv-~PDiv~--~gKgl~gG~~P~~av~~~~~ 314 (459)
T PRK06082 277 TGEWFTHQAYGI-EPDILC--IGKGLGGGLVPIAAMITKDK 314 (459)
T ss_pred cchhhHhHhhCC-CCCEEE--ecccccCCCCcceEEEEcHH
Confidence 111111111234 378887 589887642 4677777654
No 349
>PRK06148 hypothetical protein; Provisional
Probab=99.14 E-value=4.8e-08 Score=110.95 Aligned_cols=163 Identities=17% Similarity=0.139 Sum_probs=95.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhC--------CC-CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLG--------IG-MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g--------~~-~~~v~~v~~~~ 74 (448)
.++|+++|||||-.|+..||..- | ...+|......|-...-+....+ .+ ...+..++...
T Consensus 682 ~v~f~nSGsEA~e~AlklAr~~t-------G----r~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~ 750 (1013)
T PRK06148 682 VAFFVNSGSEANSLALRLARAHT-------G----QRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPD 750 (1013)
T ss_pred EEEEeCCcHHHHHHHHHHHHHhc-------C----CCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCC
Confidence 36899999999999999999752 1 22344445555544332222211 00 11233333221
Q ss_pred CC--Cc---C-------HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccc
Q psy14299 75 RG--QM---I-------CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGS 138 (448)
Q Consensus 75 ~g--~i---d-------~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~ 138 (448)
.. .. + .+.+++.++.....+..+.+|++.-.....|.+.| +++|.++|++||+.+++|+.+.+.
T Consensus 751 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGf 830 (1013)
T PRK06148 751 SYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGF 830 (1013)
T ss_pred ccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCC
Confidence 11 11 1 24566666432222345667777766666677766 999999999999999999987543
Q ss_pred ccccc-chhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 139 LIFSE-KYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 139 ~~~~~-~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
--... -+.....++ ..|++++ -|.+++-..+|.+..+++
T Consensus 831 GRtG~~~~a~e~~gv-~PDivt~--gK~lggG~Plgav~~~~e 870 (1013)
T PRK06148 831 GRVGSHWWAFETQGV-VPDIVTM--GKPIGNGHPMGAVVTTRE 870 (1013)
T ss_pred CCCCCcchhhhhcCC-Ccceeee--cccccCCcceEEEEEcHH
Confidence 11111 011111233 3688776 788876667888888654
No 350
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.13 E-value=1.3e-07 Score=98.59 Aligned_cols=166 Identities=10% Similarity=0.098 Sum_probs=93.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
.++|+++||+|+-.|+..|+.... .+|.+ ....+|......|-...-+....|.. ...+..+|.+.
T Consensus 116 ~v~f~~sGseAve~AlKlA~~~~~----~rg~~-~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~ 190 (453)
T PRK06943 116 HAFFASDGASAVEIALKMSFHAWR----NRGRG-DKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPD 190 (453)
T ss_pred EEEEeCCCHHHHHHHHHHHHHHHH----HhCCC-CCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCC
Confidence 579999999999999999976421 01211 12234555555665443333333210 00123343322
Q ss_pred CCC------------cCHHHHHHHHHHhhhcCCCcEEEEEec-cCCccccccC----HHHHHHHHHHcCCEEEEeccccc
Q psy14299 75 RGQ------------MICSFLEQTIQTSLAEKKIPLFVNATA-GTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGG 137 (448)
Q Consensus 75 ~g~------------id~e~Le~~l~~~~~~~~~~~lVv~~~-~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~ 137 (448)
... -+++++++.++. .+..+.+|++.- .....|.+.| +++|.++|++||+.+++|+.+.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG 267 (453)
T PRK06943 191 ARGARPGETAADVAARALADVRRLFAE---RAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVG 267 (453)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhC
Confidence 110 124667777753 123455566654 2455666543 89999999999999999998754
Q ss_pred ccccccchhhhhcCCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 138 SLIFSEKYSFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 138 ~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
.-....-+.....++ ..|++++ -|.+++- ..+|.+..+++
T Consensus 268 ~GRtG~~fa~~~~gv-~PDivt~--gKgl~gG~~Pi~av~~~~e 308 (453)
T PRK06943 268 CGRTGTFFACEQAGV-WPDFLCL--SKGISGGYLPLSLVLSRDA 308 (453)
T ss_pred CCCCcchhHHHhCCC-CCCeEee--ehhhccCcccceEEEEcHH
Confidence 311111111111234 3788887 7877654 25777777664
No 351
>KOG3846|consensus
Probab=99.13 E-value=3.3e-09 Score=100.80 Aligned_cols=294 Identities=12% Similarity=0.140 Sum_probs=189.3
Q ss_pred CCCchHHHHHHHHhCCCC-CcEEEEecCCC-CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHH
Q psy14299 47 EDSHYSMLKAAHWLGIGM-DNVIRVKTNER-GQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEK 124 (448)
Q Consensus 47 ~~~H~s~~~~~~~~g~~~-~~v~~v~~~~~-g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~ 124 (448)
+..||++..-|++.|+.. ..++.+++.++ ..+..+++...|++. +....+|.++...+.||...|+.+|...-+.
T Consensus 166 PSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkn---gDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~ 242 (465)
T KOG3846|consen 166 PSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKN---GDEIALVCFSGVQYYTGQYFDIGAITFAGQF 242 (465)
T ss_pred CchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhc---CCeEEEEEeecceeecccccchhhhhhcccC
Confidence 357999999999999854 34666665543 377889999998873 4456788899999999999999999977777
Q ss_pred cCCEEEEecccccccccccchhhhhcCCCCccEEEECCccccC-CCCceEEEEEeccchhhhhccCCcccccccCccccc
Q psy14299 125 YDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPHKMLG-APLQCSILLIKEKGLLHQANATAATYLFQQDKFYDV 203 (448)
Q Consensus 125 ~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~-~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~ 203 (448)
.|+++=.|-||+.+-.+..-.. . ++|+.+.++.|.+. +|.|+|.+++.++.. ....+...+|.
T Consensus 243 kgc~VGfDLAHAvgNVpL~LHd-----W-gVDFACWCSYKYlnaGaGgIgGlFvHekh~-~~~~prl~GWw--------- 306 (465)
T KOG3846|consen 243 KGCLVGFDLAHAVGNVPLQLHD-----W-GVDFACWCSYKYLNAGAGGIGGLFVHEKHT-KESLPRLAGWW--------- 306 (465)
T ss_pred CCcEechhhhhhhcCCceEEee-----c-CCceEEEeeecccccCCCccceeeeehhhh-cchhhHHhhhc---------
Confidence 8999999999998876544322 2 58999999999875 478899999866532 22111112222
Q ss_pred ccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccc
Q psy14299 204 SFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYD 283 (448)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (448)
+-+.+.|| +-++-.+
T Consensus 307 -------gh~~s~RF----------------------------------------------------------~Mdnvl~ 321 (465)
T KOG3846|consen 307 -------GHDPSKRF----------------------------------------------------------QMDNVLE 321 (465)
T ss_pred -------cCCcchhh----------------------------------------------------------hhccccc
Confidence 11222221 1111111
Q ss_pred cccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEee-ccCCC
Q psy14299 284 VSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFI-PVSLR 362 (448)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~-~~~~~ 362 (448)
+.-...|.+.+-+++.+..++...++.-.+-.+++++++..-++.|+...++...|..- +.+..-.+|... |.+..
T Consensus 322 lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~---~~rt~Kl~~~IiTP~~~~ 398 (465)
T KOG3846|consen 322 LIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKH---PLRTEKLFFTIITPTSTD 398 (465)
T ss_pred cCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCc---hhhhcceeEEEeCCcccc
Confidence 11122233333444556777777777777777999999999999999888887655321 111111111111 21111
Q ss_pred ccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 363 DKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
..... ..-..+.-+..+.+.|.++|.+ +.- +. ++.+|+.+. +.||+-.||-+++.+|.++...++
T Consensus 399 erGcQ--Lsl~Fssp~~~vfqeL~krGv~-~Dk---R~---PNvIRvAPv-pLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 399 ERGCQ--LSLYFSSPTPKVFQELHKRGVI-GDK---RR---PNVIRVAPV-PLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred cccce--EEEEeCCCchHHHHHHHHcCee-ccc---cC---CCceEeecc-hhhccHHHHHHHHHHHHHHHHHhh
Confidence 00000 0000111234788999999933 221 11 378999999 999999999999999999987654
No 352
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.12 E-value=6.1e-08 Score=98.17 Aligned_cols=151 Identities=12% Similarity=0.034 Sum_probs=95.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhC-------CC--CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLG-------IG--MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g-------~~--~~~v~~v~~~~ 74 (448)
.++|+++||+|+-.|+..++... | .+.+|..+...|-...-+....+ .. ...+..+|.+
T Consensus 83 ~v~~~~SGseA~e~Alklar~~~-------g----r~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~- 150 (364)
T PRK04013 83 YVYMGNSGTEAVEAALKFARLYT-------G----RKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFN- 150 (364)
T ss_pred EEEEeCchHHHHHHHHHHHHHHh-------C----CCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCC-
Confidence 47899999999999999998751 1 23345555555654433333211 11 0123333332
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccccc-C---HHHHHHHHHHcCCEEEEecccccccccccchhhhhc
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFD-P---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~-~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
|++.+++.+.+ ++.+|++.......|... | +++|.++|++||++++.|+++.+. -....+.....
T Consensus 151 ----d~~~l~~~i~~------~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~ 219 (364)
T PRK04013 151 ----DVEAAKEAITK------ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHY 219 (364)
T ss_pred ----CHHHHHHHhcC------CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhc
Confidence 77888888753 467888877776666554 3 999999999999999999998754 22111111122
Q ss_pred CCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 151 GINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
++ ..|.+++ -|.+++-...|.++.+++
T Consensus 220 gv-~PDiv~~--gK~lggG~P~~a~~~~~~ 246 (364)
T PRK04013 220 KV-EPDIVTM--GKGIGNGVPVSLTLTNFD 246 (364)
T ss_pred CC-CCCEEEe--cccccCCceeEEEEeccc
Confidence 33 3688877 787765455677666543
No 353
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.11 E-value=2.2e-08 Score=103.58 Aligned_cols=164 Identities=13% Similarity=0.069 Sum_probs=89.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC----------CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG----------MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~----------~~~v~~v~~~ 73 (448)
.++|+++||+|+-.|+..+|.... ..| + ....+|......|-...-+....+-. ...+..+|..
T Consensus 105 ~v~f~~SGsEAve~AlklAr~~~~----~~g-~-~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p 178 (428)
T PRK07986 105 CVFLADSGSVAVEVAMKMALQYWQ----AKG-E-PRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAP 178 (428)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHH----hcC-C-CCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCC
Confidence 579999999999999999987411 011 0 12334555556665443333222210 0112233322
Q ss_pred CCC------CcCHHHHHHHHHHhhhcCCCcEEEEEecc-CCccccc----cCHHHHHHHHHHcCCEEEEecccccccccc
Q psy14299 74 ERG------QMICSFLEQTIQTSLAEKKIPLFVNATAG-TTVLGAF----DPLDEIATVCEKYDLWMHVDACWGGSLIFS 142 (448)
Q Consensus 74 ~~g------~id~e~Le~~l~~~~~~~~~~~lVv~~~~-~t~tG~~----~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~ 142 (448)
... .-|++++++.++.. +.+..+|++.-. ....|.+ ..+++|.++|++||+++++|+++.+.-...
T Consensus 179 ~~~~~~~~~~~d~~~l~~~l~~~---~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG 255 (428)
T PRK07986 179 QSRFDGEWDERDIAPFARLMAAH---RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTG 255 (428)
T ss_pred CcccchhhHHHHHHHHHHHHHhC---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCC
Confidence 111 12567788877531 224445565543 4434543 338999999999999999999985421111
Q ss_pred cchhhhhcCCCCccEEEECCccccCCC-CceEEEEEec
Q psy14299 143 EKYSFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 143 ~~~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~ 179 (448)
.-+.....++ ..|+++ ..|.+++- ..+|.+..++
T Consensus 256 ~~fa~~~~gv-~PDi~t--~gK~l~gG~~p~~av~~~~ 290 (428)
T PRK07986 256 KLFACEHAGI-APDILC--LGKALTGGTMTLSATLTTR 290 (428)
T ss_pred CeeeecccCC-CCCEEE--echhhhCCcccCcchhchH
Confidence 1101111233 258776 57877543 2455555554
No 354
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.11 E-value=5.7e-08 Score=101.02 Aligned_cols=157 Identities=13% Similarity=0.136 Sum_probs=85.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCC-CCCCeEEEecCCCchHHHHHHHHhCCCCCc--------EEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLS-HLPPLCMFTSEDSHYSMLKAAHWLGIGMDN--------VIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~-~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~--------v~~v~~~~ 74 (448)
.++|+++|||||-.|+..||.+........|.+ .....+|-.....|-...-+....+..... ...++...
T Consensus 112 ~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~ 191 (443)
T PRK08297 112 HLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPK 191 (443)
T ss_pred EEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCC
Confidence 579999999999999999986521000011210 012334555556665544444443321000 00011000
Q ss_pred -C----C-C---------cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc----cCHHHHHHHHHHcCCEEEEeccc
Q psy14299 75 -R----G-Q---------MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF----DPLDEIATVCEKYDLWMHVDACW 135 (448)
Q Consensus 75 -~----g-~---------id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~----~~l~~I~~ia~~~g~~l~VD~A~ 135 (448)
. . . -+++++++.+.. .+.++.+|++.-.....|.+ ..+++|.++|++||+++++|+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~ 268 (443)
T PRK08297 192 LRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQ 268 (443)
T ss_pred CCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 0 0 0 023455555643 23356677777666666765 55999999999999999999998
Q ss_pred ccccccccchhhhhcCCCCccEEEECCcccc
Q psy14299 136 GGSLIFSEKYSFVLKGINRANSVSWNPHKML 166 (448)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l 166 (448)
.+.-....-+.....++ ..|++++ .|.+
T Consensus 269 tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l 296 (443)
T PRK08297 269 TGVGLTGTAWAYQQLGV-RPDIVAF--GKKT 296 (443)
T ss_pred hccCccchHHHHHhcCC-CCCEEEe--cccc
Confidence 64311111111111233 3688875 7876
No 355
>PRK05965 hypothetical protein; Provisional
Probab=99.11 E-value=1e-07 Score=99.55 Aligned_cols=167 Identities=11% Similarity=0.062 Sum_probs=95.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC-------C--CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI-------G--MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~-------~--~~~v~~v~~~~ 74 (448)
.++|+++||+||-.|+..||.... ..|.+ ....+|......|-...-+....+. + ...+..++.+.
T Consensus 109 ~v~f~~sGSEAve~AlKlAr~~~~----~~g~~-~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~ 183 (459)
T PRK05965 109 HVYFTLGGSDAVDSAVRFIRHYWN----ATGRP-SKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPY 183 (459)
T ss_pred EEEEeCChhHHHHHHHHHHHHHHH----hcCCC-CccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCc
Confidence 479999999999999999987521 11211 1223454555566554333333221 1 11123333221
Q ss_pred CC----CcC--------HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccc
Q psy14299 75 RG----QMI--------CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGS 138 (448)
Q Consensus 75 ~g----~id--------~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~ 138 (448)
.. .-| ++++++.++.. .+....+|++.-.....|.+.| +++|.++|++||+.+++|+.+.+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGf 261 (459)
T PRK05965 184 PYRNPVGDDPQAIIAASVAALRAKVAEL--GADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGF 261 (459)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccC
Confidence 11 012 25677777531 1134556676665555566544 899999999999999999987654
Q ss_pred cccccchhhhhcCCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 139 LIFSEKYSFVLKGINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 139 ~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
--...-+.....++ ..|++++ -|.+++-+ ..|.++.+++
T Consensus 262 GRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~ 301 (459)
T PRK05965 262 GRTGPLFACEAEGV-VPDLMTV--AKGLTSGYVPMGAVLMSDH 301 (459)
T ss_pred ccCchhhhHhhcCC-CCCeEEe--chhhccCCcceeEEEEcHH
Confidence 21111111111233 3788887 68776553 5788777664
No 356
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.10 E-value=7.3e-08 Score=100.78 Aligned_cols=166 Identities=15% Similarity=0.116 Sum_probs=94.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.++|+++||+||-.|+..||.... ..|-+ ....+|......|-...-+..+.+... ..+..+|...
T Consensus 109 ~v~f~~sGsEAve~AlKlAr~~~~----~~g~t-~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~ 183 (466)
T PRK07030 109 RCFYADNGSSAIEVALKMSFHYWR----NRGKP-RKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPD 183 (466)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHH----HhCCC-CCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCC
Confidence 578999999999999999986421 01111 122345555566655444444333210 0123333322
Q ss_pred CCC------------cCHHHHHHHHHHhhhcCCCcEEEEEec-cCCccccccC----HHHHHHHHHHcCCEEEEeccccc
Q psy14299 75 RGQ------------MICSFLEQTIQTSLAEKKIPLFVNATA-GTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGG 137 (448)
Q Consensus 75 ~g~------------id~e~Le~~l~~~~~~~~~~~lVv~~~-~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~ 137 (448)
..+ -+++.+++.+++ .+....+|++.- .....|.+.| +++|.++|++||+++++|+.+.+
T Consensus 184 ~~~~~~~~~~~~~~~~~l~~le~~~~~---~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TG 260 (466)
T PRK07030 184 CYLRPEGMSWEEHSRRMFAHMEQTLAE---HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVG 260 (466)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhC
Confidence 111 124566777753 223455566654 3454566544 89999999999999999998664
Q ss_pred ccccccchhhhhcCCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 138 SLIFSEKYSFVLKGINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 138 ~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
.-....-+.....++ ..|++++ -|.+++-+ ..|.+..+++
T Consensus 261 fGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~e 301 (466)
T PRK07030 261 FGRTGTMFACEQAGI-RPDFLCL--SKALTGGYLPLAAVLTTDT 301 (466)
T ss_pred cCccccchHHHhcCC-CCCEEee--ehhccCCcccceEEEecHH
Confidence 321111111111233 3788887 78776542 5777777654
No 357
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.10 E-value=6.1e-08 Score=100.41 Aligned_cols=160 Identities=13% Similarity=0.091 Sum_probs=95.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC-C---------CCcEEE--Ee
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI-G---------MDNVIR--VK 71 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~-~---------~~~v~~--v~ 71 (448)
..+|+++|++|+-.|+..++... .+..+|.++...|-...-+....+. . ...+.. +|
T Consensus 104 ~~~f~~sGsea~e~Alklar~~~-----------~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (425)
T PRK08088 104 KTLLVTTGSEAVENAVKIARAAT-----------KRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYP 172 (425)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHh-----------CCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCC
Confidence 56899999999999999988752 1344566677777766555443321 0 001111 22
Q ss_pred cCCCCCcC----HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccccccc
Q psy14299 72 TNERGQMI----CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSE 143 (448)
Q Consensus 72 ~~~~g~id----~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~ 143 (448)
.+.++ ++ ++.|++.++.. ..+..+.+|++.-.....|.+.+ +++|.++|++||+++++|.++++......
T Consensus 173 ~~~~~-~~~~~~~~~l~~~l~~~-~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~ 250 (425)
T PRK08088 173 CPLHG-VSEDDAIASIERIFKND-AAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGT 250 (425)
T ss_pred ccccC-ccHHHHHHHHHHHHHhc-cCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc
Confidence 21221 22 45677777531 11234667777766666676666 99999999999999999999885322111
Q ss_pred chhhhhcCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 144 KYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 144 ~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
.......++ ..|+ .++.|.+++-..+|++..++
T Consensus 251 ~~~~~~~~~-~pdi--~s~sK~l~~G~rig~v~~~~ 283 (425)
T PRK08088 251 LFAMEQMGV-AADL--TTFAKSIAGGFPLAGVTGRA 283 (425)
T ss_pred hhHHhhcCC-CCCE--EEEeccccCCCcceeeEecH
Confidence 111111122 2454 55689887445567777744
No 358
>PRK07482 hypothetical protein; Provisional
Probab=99.10 E-value=1.8e-07 Score=97.83 Aligned_cols=167 Identities=19% Similarity=0.134 Sum_probs=92.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC-------C--CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI-------G--MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~-------~--~~~v~~v~~~~ 74 (448)
-++|+++||+|+-.|+..||.... ..|.++ ...+|-.....|-...-+....+. + ...+..++.+.
T Consensus 113 ~v~f~~sGSEAve~AlKlAr~~~~----~~g~~~-r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~ 187 (461)
T PRK07482 113 KVYYGLSGSDANETQIKLVWYYNN----VLGRPE-KKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPH 187 (461)
T ss_pred EEEEeCchHHHHHHHHHHHHHHHH----hcCCCC-CceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCc
Confidence 468999999999999999986421 112211 222343444555433222222221 0 11123333221
Q ss_pred CCC-------------cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccc
Q psy14299 75 RGQ-------------MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGG 137 (448)
Q Consensus 75 ~g~-------------id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~ 137 (448)
..+ -+++.+++.+.+. .+..+.+|++.-.....|.+.| +++|.++|++||+++++|+.+.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tG 265 (461)
T PRK07482 188 YYRRADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTG 265 (461)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccC
Confidence 111 1456777777431 1234556666655555566543 89999999999999999998765
Q ss_pred ccccccchhhhhcCCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 138 SLIFSEKYSFVLKGINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 138 ~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
.--....+.....++ ..|++++ -|.+++-+ ..|.++.+++
T Consensus 266 fGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~ 306 (461)
T PRK07482 266 FGRLGSMFGSDHYGI-EPDLITV--AKGLTSAYAPLSGSIVGEK 306 (461)
T ss_pred CCcCcchhhHHhcCC-CCCEEEE--ccccccCccccceeeecHH
Confidence 422111111111233 3788886 78876543 4667667654
No 359
>KOG2467|consensus
Probab=99.09 E-value=1.2e-08 Score=99.04 Aligned_cols=247 Identities=16% Similarity=0.171 Sum_probs=150.4
Q ss_pred CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCC
Q psy14299 74 ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGIN 153 (448)
Q Consensus 74 ~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~ 153 (448)
..|-||.|.||+.-.. .+|+++++ +.+...-..|.+++.+||.+.|+.++.|.||-.|.......+. ..+
T Consensus 172 ~TG~IDYD~Le~~A~~-----frPk~iia--G~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vips---PFe 241 (477)
T KOG2467|consen 172 STGYIDYDKLEKTATL-----FRPKLIIA--GTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPS---PFE 241 (477)
T ss_pred CCCceehHHHHHHHHh-----cCCcEEEe--ccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCC---ccc
Confidence 4689999999998766 47888766 3444567889999999999999999999998877653332221 234
Q ss_pred CccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChH
Q psy14299 154 RANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 233 (448)
Q Consensus 154 ~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 233 (448)
.+|+++.+.||.|.+|.|.-+||-+--.....-......|- -.++.+...+ .++|++..=
T Consensus 242 y~DiVTTTTHKsLRGPRg~mIFyRkGvk~~~~k~g~~i~yd-lE~kINfaVF----P~lQGGPHN--------------- 301 (477)
T KOG2467|consen 242 YCDIVTTTTHKSLRGPRGAMIFYRKGVKSIKPKQGKEILYD-LEDKINFAVF----PGLQGGPHN--------------- 301 (477)
T ss_pred ccceeeccccccccCCcceeEEEeccCCcCCCCCCCcceec-hhhhhhhhcc----ccccCCCCc---------------
Confidence 68999999999999999766655332111110000000111 0110000000 012222221
Q ss_pred HHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcC
Q psy14299 234 GFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 313 (448)
Q Consensus 234 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (448)
--+-+++++|+-...
T Consensus 302 -----------------------------------------------------------------htIaalAvALkQa~t 316 (477)
T KOG2467|consen 302 -----------------------------------------------------------------HTIAALAVALKQAMT 316 (477)
T ss_pred -----------------------------------------------------------------chHHHHHHHHHhhCC
Confidence 112344556665566
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEE
Q psy14299 314 LGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMI 393 (448)
Q Consensus 314 ~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~ 393 (448)
..|.+..++..++++.+.+.|.++ |++++.+......+.+.+.|.++++. ..+ .+++.+. |.+
T Consensus 317 pefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~~G~dGa--------rvE----~vle~~~----I~~ 379 (477)
T KOG2467|consen 317 PEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLVDLRPKGVDGA--------RVE----KVLELCH----IAL 379 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEEeccccCCchH--------HHH----HHHHHhh----hhh
Confidence 667778888889999999999998 99998444567888888888888753 222 2222211 111
Q ss_pred EeeecCCc---ccccEEEEEecCCCCCC----HHHHHHHHHHHHHHHH
Q psy14299 394 GYQPLQHR---NLHNFFRLVTTCHPASS----RQDMDYAIDQIELRGA 434 (448)
Q Consensus 394 ~~~~~~g~---~~~~~lRis~~~~~~~t----~edid~l~~al~~~~~ 434 (448)
.-....|. --++.+|++. -..|| ++|.++..+-|.+..+
T Consensus 380 NKNtvpGD~Sal~PgGiRiGt--PAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 380 NKNTVPGDKSALSPGGIRIGT--PAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred cCCcCCCCccccCCCceeccc--hhhcccCccHHHHHHHHHHHHHHHH
Confidence 11111111 1136799986 33444 6889888888877654
No 360
>PRK07481 hypothetical protein; Provisional
Probab=99.08 E-value=2.2e-07 Score=96.84 Aligned_cols=169 Identities=14% Similarity=0.081 Sum_probs=93.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
.++|+++||+|+-.|+..||.... ..|.+ ....+|......|-...-+....+-. ...+..++.+.
T Consensus 106 ~v~f~~sGsEAve~AlklAr~~~~----~~g~~-~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~ 180 (449)
T PRK07481 106 RVFFSSGGSDSVETALKLARQYWK----VRGQP-ERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPW 180 (449)
T ss_pred EEEEcCchHHHHHHHHHHHHHHHH----hcCCC-CCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCc
Confidence 478999999999999999987521 11211 12334555555665433333222210 00133333221
Q ss_pred CCC-----cCHHHHHHHHHHh----h--hcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccc
Q psy14299 75 RGQ-----MICSFLEQTIQTS----L--AEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSL 139 (448)
Q Consensus 75 ~g~-----id~e~Le~~l~~~----~--~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~ 139 (448)
..+ -|++.+++.+.+. . ..+..+.+|++.-.....|.+.| +++|.++|++||+++++|+.+.+.-
T Consensus 181 ~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfG 260 (449)
T PRK07481 181 LYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFG 260 (449)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcC
Confidence 110 1444444333211 1 11234666777766666677655 8999999999999999999876432
Q ss_pred ccccchhhhhcCCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 140 IFSEKYSFVLKGINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 140 ~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
.....+.....++ ..|++++ .|.+++-+ .+|.+.++++
T Consensus 261 RtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~ 299 (449)
T PRK07481 261 RTGSWFGSRGWGV-KPDIMCL--AKGITSGYVPLGATMVNAR 299 (449)
T ss_pred cCchhhHhhhcCC-CCCEEEE--eecccCCCcCceEEEEcHH
Confidence 1111111111233 3788887 78776532 4677777664
No 361
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.08 E-value=1.1e-07 Score=99.25 Aligned_cols=166 Identities=14% Similarity=0.107 Sum_probs=93.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.++|+++||+||-.|+..||.... ..|.+ ....+|......|-...-+..+.+... ..+..+|...
T Consensus 118 ~v~f~~SGseAve~AlklAr~~~~----~~g~t-gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~ 192 (460)
T PRK06916 118 KVFYSDSGATAVEIAIKMAFQYWQ----NKGKP-KKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPY 192 (460)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHH----hcCCC-CCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCc
Confidence 578999999999999999987421 11221 123345556666665544444433210 0133343321
Q ss_pred CC------------CcCHHHHHHHHHHhhhcCCCcEEEEEec-cCCccccccC----HHHHHHHHHHcCCEEEEeccccc
Q psy14299 75 RG------------QMICSFLEQTIQTSLAEKKIPLFVNATA-GTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGG 137 (448)
Q Consensus 75 ~g------------~id~e~Le~~l~~~~~~~~~~~lVv~~~-~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~ 137 (448)
.. .-+++.+++.++. .+....+|++.- .....|.+.| +++|.++|++||+++++|+.+.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG 269 (460)
T PRK06916 193 TYRSPYGNDKAEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATG 269 (460)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhC
Confidence 10 0134566666653 123455566654 3455565533 89999999999999999998764
Q ss_pred ccccccchhhhhcCCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 138 SLIFSEKYSFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 138 ~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
.--....+.....++ ..|++++ -|.+++- ..+|.+..+++
T Consensus 270 ~GRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~e 310 (460)
T PRK06916 270 FGRTGKMFACEHENV-TPDIMTA--GKGLTGGYLPIAITVTTDE 310 (460)
T ss_pred CCcCchhhHHHhcCC-CCCeeee--ehhhhcCccccceeeecHH
Confidence 311111111111233 3688775 7877654 25777777654
No 362
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.08 E-value=3.4e-07 Score=95.63 Aligned_cols=160 Identities=21% Similarity=0.138 Sum_probs=89.6
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCCCC
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNERG 76 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~~g 76 (448)
+|+++||+|+-.|+..+|... | ...+|-.....|-...-+....+-. ...+..+|.+...
T Consensus 125 f~~~SGsEAve~AlklAr~~t-------g----r~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (459)
T PRK06931 125 FTGPSGADAVEAAIKLAKTYT-------G----RSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEY 193 (459)
T ss_pred EeCCCcHHHHHHHHHHHHHhc-------C----CCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccc
Confidence 556899999999999998752 1 2233444555555444443333210 0123344433211
Q ss_pred C--------cCHHHHHHHHHHhhh----cCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccc
Q psy14299 77 Q--------MICSFLEQTIQTSLA----EKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLI 140 (448)
Q Consensus 77 ~--------id~e~Le~~l~~~~~----~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~ 140 (448)
+ -+.+.+++.+++..+ .+.++.+|++.-.....|.+.| +++|.++|++||+++++|+.+.+.--
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGR 273 (459)
T PRK06931 194 RCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFAR 273 (459)
T ss_pred cccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCc
Confidence 1 134445444443322 1223556666555555565544 89999999999999999998765322
Q ss_pred cccchhhhhcCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 141 FSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 141 ~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
....+.....++ ..|.+++ -|.+++-..+|.+..++
T Consensus 274 tG~~~a~~~~gv-~PDivt~--gK~l~gG~Pi~av~~~~ 309 (459)
T PRK06931 274 TGKMFAFEHAGI-EPDIIVM--SKAVGGGLPLAVLGIKK 309 (459)
T ss_pred CchHHHhhhcCC-CCCEEEe--cccccCCcceeeeeeHH
Confidence 111111111233 3788887 68776545577766654
No 363
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.07 E-value=2e-07 Score=97.53 Aligned_cols=166 Identities=12% Similarity=0.037 Sum_probs=94.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.++|+++||+||-.|+..||..... .|-+ ....+|......|-...-+....+... ..+..+|.+.
T Consensus 131 ~v~f~~sGSEAvE~AlKlAr~~~~~----~g~~-~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~ 205 (472)
T PRK08742 131 KVFYADNGSAGVEVALKMAFHYFHN----RGEH-RRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPD 205 (472)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHHh----cCCC-CCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCC
Confidence 5799999999999999999875311 1211 123345555556655444433332210 0133344322
Q ss_pred CCC------------cCHHHHHHHHHHhhhcCCCcEEEEEec-cCCccccccC----HHHHHHHHHHcCCEEEEeccccc
Q psy14299 75 RGQ------------MICSFLEQTIQTSLAEKKIPLFVNATA-GTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGG 137 (448)
Q Consensus 75 ~g~------------id~e~Le~~l~~~~~~~~~~~lVv~~~-~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~ 137 (448)
..+ -+++.+++.++. .+..+.+|++.- .....|.+.| ++++.++|++||+.+++|+.+.+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TG 282 (472)
T PRK08742 206 AYLAEPGQSAEDYALQAADALQALFEQ---SPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATG 282 (472)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhC
Confidence 111 135666777653 123455555554 2444565433 89999999999999999998664
Q ss_pred ccccccchhhhhcCCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 138 SLIFSEKYSFVLKGINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 138 ~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
.-....-+.....++ ..|++++ -|.+++-+ ..|.++.+++
T Consensus 283 fGRtG~~~a~e~~gv-~PDiv~~--gKgl~gG~~Plaav~~~~e 323 (472)
T PRK08742 283 FGRTGTLFACEQAGV-MPDLLCL--SKGLTGGFLPLSAVLATQQ 323 (472)
T ss_pred CCCCccchHHHhcCC-CCCEEEE--cccccCCCCCcceeeccHH
Confidence 322111111111233 3788887 78776542 4677777654
No 364
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.07 E-value=2.8e-07 Score=96.18 Aligned_cols=162 Identities=14% Similarity=0.087 Sum_probs=87.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC--------C--CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI--------G--MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~--------~--~~~v~~v~~~ 73 (448)
.++|+++||+||-.|+..||..- | ...+|-.....|-...-+....+- + ...+..+|..
T Consensus 117 ~v~f~~sGseA~e~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (451)
T PRK06918 117 KVLFLNSGAEAVENAVKIARKYT-------K----RQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFP 185 (451)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHh-------C----CCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCC
Confidence 57999999999999999998752 1 223444455556544444333221 0 0123334332
Q ss_pred CCC----CcC--------HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccc
Q psy14299 74 ERG----QMI--------CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGG 137 (448)
Q Consensus 74 ~~g----~id--------~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~ 137 (448)
... .+. .+.+++.+... ..+..+.+|++.-.....|.+.| +++|.++|++||++++.|+.+.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg 264 (451)
T PRK06918 186 YEYRRPEGLTEEQYDDFMIEEFKNFFISE-VAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTG 264 (451)
T ss_pred ccccccccCchHHHHHHHHHHHHHHHHhh-cCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 110 111 12233333211 01223445555544444465433 88999999999999999998765
Q ss_pred ccccccchhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 138 SLIFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 138 ~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
.......+.....++ ..|++ +..|.+++-..+|.++.+++
T Consensus 265 ~gr~g~~~a~~~~~v-~pDi~--t~sK~l~~G~pig~v~~~~~ 304 (451)
T PRK06918 265 FARTGKYFAIEHFDV-VPDLI--TVSKSLGAGVPISGVIGRKE 304 (451)
T ss_pred cCccCceehhHhcCC-CCCEE--eeehhhcCCCccEEEEEcHH
Confidence 422111111111122 25744 56898875556788777543
No 365
>PRK07483 hypothetical protein; Provisional
Probab=99.06 E-value=4.3e-07 Score=94.47 Aligned_cols=167 Identities=19% Similarity=0.194 Sum_probs=91.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
.++|+++||+||-.|+..||.... ..|.+ ....+|......|-...-+....+-. ...+..++...
T Consensus 92 ~v~f~~sGsEAve~AlklAr~~~~----~~g~~-~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~ 166 (443)
T PRK07483 92 HVYFVSGGSEAVEAALKLARQYFV----EIGQP-QRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCY 166 (443)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHH----hcCCC-CCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCc
Confidence 478999999999999999987521 11211 12223444556665544443333210 01123333221
Q ss_pred CCCc-------------CHHHHHHHHHHhhhcCCCcEEEEEeccCC-ccccccC----HHHHHHHHHHcCCEEEEecccc
Q psy14299 75 RGQM-------------ICSFLEQTIQTSLAEKKIPLFVNATAGTT-VLGAFDP----LDEIATVCEKYDLWMHVDACWG 136 (448)
Q Consensus 75 ~g~i-------------d~e~Le~~l~~~~~~~~~~~lVv~~~~~t-~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~ 136 (448)
..+- .++++++.+... ....+.+|++.-... ..|.+.| +++|.++|++||+++++|+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 244 (443)
T PRK07483 167 AYREQRAGESDEAYGQRLADELEAKILEL--GPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMC 244 (443)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHHhc--CCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEeccee
Confidence 1110 124566655421 112345566554443 2465554 8999999999999999999876
Q ss_pred cccccccchhhhhcCCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 137 GSLIFSEKYSFVLKGINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
+.--...-+.....++ ..|++++ -|.+++-+ ..|.+..+++
T Consensus 245 GfGRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~ 286 (443)
T PRK07483 245 GMGRTGTLFACEEDGV-APDLVTI--AKGLGAGYQPIGAVLASDR 286 (443)
T ss_pred CcccCcHHHHHhhcCC-CCCeeee--hhhhccCccccEEEEEcHH
Confidence 4322111111111233 3688887 78776543 5777777664
No 366
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.06 E-value=3.1e-08 Score=102.73 Aligned_cols=153 Identities=19% Similarity=0.096 Sum_probs=84.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH---HHHh--CCCC---CcEEEEecCCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA---AHWL--GIGM---DNVIRVKTNER 75 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~---~~~~--g~~~---~~v~~v~~~~~ 75 (448)
.++|+++||+||..|+..||... | ...++-+....+++.... .... +... ..+..++.+
T Consensus 106 ~v~f~~sGseA~e~AlklAr~~t-------g----r~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-- 172 (431)
T PRK06209 106 MVKFCKNGSDATSAAVRLARAYT-------G----RDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRYN-- 172 (431)
T ss_pred eEEEecCHHHHHHHHHHHHHHHh-------C----CCeEEEeccCccccccccccccCCCCCCCChhHhccccccCCC--
Confidence 47899999999999999998752 1 111222211111111100 0000 1100 012222322
Q ss_pred CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCc
Q psy14299 76 GQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRA 155 (448)
Q Consensus 76 g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~a 155 (448)
|+++|++.+++. ..++.+|++.....+.+...++++|.++|++||+++++|+++.+.... ........++ ..
T Consensus 173 ---d~~~l~~~l~~~---~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~-~~g~~~~~gv-~P 244 (431)
T PRK06209 173 ---DIASLEALFEDH---PGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWH-MRGAQKLYGI-VP 244 (431)
T ss_pred ---CHHHHHHHHHhC---CCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcC-cchhhHHhCC-Cc
Confidence 889999999642 124556666554444444555999999999999999999998543221 1000001133 35
Q ss_pred cEEEECCccccCCCCceEEEEEec
Q psy14299 156 NSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 156 D~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
|.++ ..|.+++-...|.+..++
T Consensus 245 Di~t--~gK~lggG~p~~av~~~~ 266 (431)
T PRK06209 245 DLSC--FGKALGNGFAVSALAGKR 266 (431)
T ss_pred ceee--ehhhhcCCcccEEEEEHH
Confidence 7755 489887634456666654
No 367
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.05 E-value=3.7e-08 Score=102.51 Aligned_cols=159 Identities=11% Similarity=-0.012 Sum_probs=91.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCc---cc-----c--cC-----CCCCCC-eEEEecCCCchHHHHHHHHhCCCC---
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPD---TK-----R--KG-----LSHLPP-LCMFTSEDSHYSMLKAAHWLGIGM--- 64 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~---~~-----~--~G-----~~~~~~-~~Vl~~~~~H~s~~~~~~~~g~~~--- 64 (448)
.++|+++|||||-.|+..||...... +. + +| .++.++ .+|-.....|-...-+....+-..
T Consensus 124 ~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~ 203 (464)
T TIGR00699 124 QVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHK 203 (464)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccc
Confidence 47999999999999999998642100 00 0 00 011112 345555666766555555443210
Q ss_pred -----CcEEEEecCCC----C----------CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHH
Q psy14299 65 -----DNVIRVKTNER----G----------QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATV 121 (448)
Q Consensus 65 -----~~v~~v~~~~~----g----------~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~i 121 (448)
..+..+|.+.. . .-+++.+++++++ .+..+.+|++.-.....|.+.| +++|.++
T Consensus 204 ~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~---~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~l 280 (464)
T TIGR00699 204 LDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKK---WHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDI 280 (464)
T ss_pred cCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHh---cCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHH
Confidence 01122222210 0 0135567777753 1234667787777777788888 9999999
Q ss_pred HHHcCCEEEEecccccccccccchhhhhcCCC-CccEEEECCccccC
Q psy14299 122 CEKYDLWMHVDACWGGSLIFSEKYSFVLKGIN-RANSVSWNPHKMLG 167 (448)
Q Consensus 122 a~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~-~aD~~~~s~hK~l~ 167 (448)
|++||+++++|+.+.+.-....-+.....++. ..|++++ .|.++
T Consensus 281 c~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~--gK~lg 325 (464)
T TIGR00699 281 TKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTF--SKKFQ 325 (464)
T ss_pred HHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEe--hhhhc
Confidence 99999999999987543211111111112332 3788666 78774
No 368
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.99 E-value=7e-07 Score=92.33 Aligned_cols=167 Identities=14% Similarity=0.086 Sum_probs=86.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC----------CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG----------MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~----------~~~v~~v~~~ 73 (448)
.++|+++||+||-.|+..||.... ..|.+ ....+|......|-...-+....+-. ...+..+|.+
T Consensus 102 ~v~f~~SGseA~e~AlklAr~~~~----~~g~~-~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~ 176 (422)
T PRK05630 102 HVFYSDSGSVSVEVAIKMALQYSK----GQGHP-ERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAP 176 (422)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHH----hcCCC-CCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCC
Confidence 578999999999999999987521 11211 12234555666665444333332210 0112333332
Q ss_pred CCCCcCHHHHHH---HHHHhhhcCCCcEEEEEecc-CCccccc----cCHHHHHHHHHHcCCEEEEecccccccccccch
Q psy14299 74 ERGQMICSFLEQ---TIQTSLAEKKIPLFVNATAG-TTVLGAF----DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKY 145 (448)
Q Consensus 74 ~~g~id~e~Le~---~l~~~~~~~~~~~lVv~~~~-~t~tG~~----~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~ 145 (448)
.....+.+++++ .+++..+ .+..+|++.-. ....|.+ ..+++|.++|++||+++++|+++.+.-....-+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~--~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~ 254 (422)
T PRK05630 177 PVRGSSPQEISEYLRSLELLID--ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELF 254 (422)
T ss_pred cccCCChHHHHHHHHHHHHHHh--hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhh
Confidence 111112222222 2221111 13445555542 4444543 448999999999999999999975431111111
Q ss_pred hhhhcCCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 146 SFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 146 ~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
.....++ ..|++++ -|.+++- ...|+++++++
T Consensus 255 a~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~ 287 (422)
T PRK05630 255 ATLAAGV-TPDIMCV--GKALTGGFMSFAATLCTDK 287 (422)
T ss_pred HHHhcCC-CCCeeee--echhhcCccccceeeccHH
Confidence 1111233 3688754 8988542 23565566554
No 369
>PRK07046 aminotransferase; Validated
Probab=98.98 E-value=5.8e-07 Score=93.73 Aligned_cols=151 Identities=15% Similarity=0.089 Sum_probs=92.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHH--h----------CCC---CCcEE
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHW--L----------GIG---MDNVI 68 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~--~----------g~~---~~~v~ 68 (448)
.+.|+++||||+..|+..||..- | ...+|-.....|-........ . |.. ...+.
T Consensus 132 ~v~F~nSGtEA~e~AlrlAR~~T-------G----r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~ 200 (453)
T PRK07046 132 YWQVATTATDANRFVLRWARAVT-------G----RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTR 200 (453)
T ss_pred EEEEECCHHHHHHHHHHHHHHhh-------C----CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceE
Confidence 36899999999999999998752 1 223344444455432111110 0 110 01123
Q ss_pred EEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccc
Q psy14299 69 RVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEK 144 (448)
Q Consensus 69 ~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~ 144 (448)
.+|.+ |++.+++.+.. ....+|++.-.....|.+.| ++++.++|++||+++++|+.+.+..-+..
T Consensus 201 ~~~~n-----d~~~l~~~l~~-----~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg- 269 (453)
T PRK07046 201 VVEFN-----DLAALEAALAD-----GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGG- 269 (453)
T ss_pred eeCCC-----CHHHHHHHhCC-----CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcc-
Confidence 33332 88999998842 24566777666666676655 89999999999999999998751110000
Q ss_pred hhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 145 YSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 145 ~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
... ..++ ..|.+++ -|.+++-..+|.+..+++
T Consensus 270 ~~~-~~gv-~PDi~t~--gK~lggG~Pi~av~g~~~ 301 (453)
T PRK07046 270 YTR-AHGL-EPDFLVV--GKPIAGGVPCAVYGFSAE 301 (453)
T ss_pred hhH-HhCC-Cccceee--hhhhcCCCcceeeeehHH
Confidence 011 1134 3688775 788776566888777664
No 370
>KOG1404|consensus
Probab=98.90 E-value=1.2e-07 Score=93.21 Aligned_cols=294 Identities=14% Similarity=0.132 Sum_probs=161.1
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcE----------EEEecCC
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNV----------IRVKTNE 74 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v----------~~v~~~~ 74 (448)
++||++|||||-+|++.+|.+.. .-+.|-.....|-+-.-.+.+.+.+..+. ..+.+++
T Consensus 112 vfF~nsGsEANelal~mar~Yt~-----------~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp 180 (442)
T KOG1404|consen 112 VFFVNSGSEANELALKMARLYTG-----------NLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDP 180 (442)
T ss_pred EEEecCCchHHHHHHHHHHHhcC-----------CceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCc
Confidence 78999999999999999988632 33445555566666555555555432111 0111111
Q ss_pred -----CCC---cCHHHHHHHHHHhhhc-C-CCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccc
Q psy14299 75 -----RGQ---MICSFLEQTIQTSLAE-K-KIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLI 140 (448)
Q Consensus 75 -----~g~---id~e~Le~~l~~~~~~-~-~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~ 140 (448)
.+. --.+.+.+.+++.... + ..+...++......-|++.+ +++..++|+++|..++.|.++.+.--
T Consensus 181 ~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGR 260 (442)
T KOG1404|consen 181 YRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGR 260 (442)
T ss_pred ccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccc
Confidence 000 0122233322221111 1 22444555555565677766 89999999999999999998876433
Q ss_pred cccchhhhhcCCCCccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchh
Q psy14299 141 FSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDA 220 (448)
Q Consensus 141 ~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (448)
...-|.+.-.++ .-|+++ ..|.++.-...|.++...+ +.... .....|++.-. +.+...
T Consensus 261 tG~~wgfe~h~v-~PDIvT--mAKgiGnG~Pl~AVvtt~E-Ia~v~-~~~~~~fnTyg----------------gnP~a~ 319 (442)
T KOG1404|consen 261 TGHMWGFESHGV-VPDIVT--MAKGIGNGFPLGAVVTTPE-IADVL-NQKSSHFNTYG----------------GNPVAC 319 (442)
T ss_pred ccccccccccCC-CccHHH--HHhhccCCCcceeeecCHH-HHHHH-HhccccccccC----------------CCchhH
Confidence 222222211222 135444 4788887788888887664 32222 22222333211 112111
Q ss_pred HHHHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchh
Q psy14299 221 FKLWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVD 300 (448)
Q Consensus 221 ~~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (448)
....++++.+
T Consensus 320 avg~aVL~Vi---------------------------------------------------------------------- 329 (442)
T KOG1404|consen 320 AVGLAVLKVI---------------------------------------------------------------------- 329 (442)
T ss_pred HHHHHHHHHH----------------------------------------------------------------------
Confidence 1111111111
Q ss_pred hHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCC-CeEEeccCCc--eeeEEEEeeccCCCccccchhhhhhhhhh
Q psy14299 301 AFKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRP-GFRLVIPEFQ--CTNICFWFIPVSLRDKVEDETWWSTLSKV 377 (448)
Q Consensus 301 ~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~p-g~~l~~~~~~--~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 377 (448)
-.|++.++......||.+.|.++. +.+++ .+.+ .-++-+.+.....+. .+.++. .
T Consensus 330 --------------kee~LqE~aa~vG~yl~~~l~~l~d~h~iI-GdVRG~GLm~GvE~V~dk~~~--~pp~~~-----~ 387 (442)
T KOG1404|consen 330 --------------KEENLQENAAEVGSYLLEKLAALKDKHPII-GDVRGRGLMLGVELVSDKSEP--KPPATA-----E 387 (442)
T ss_pred --------------HHHhHHHHHHHHHHHHHHHHHHHhhcCCce-eecccceeEEEEEEecccCCC--CCcchH-----H
Confidence 124566777788999999988864 35666 4332 222333332111000 111111 2
Q ss_pred hHHHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHH
Q psy14299 378 APRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQI 429 (448)
Q Consensus 378 ~~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al 429 (448)
...+.+.+.+.| +.++-+.+.| +.+|+++ -.-.|+||||.+++..
T Consensus 388 ~~~i~~~cke~G-vlvg~g~i~G----~vfriaP--PlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 388 GAVIGEQCKELG-VLVGKGGIHG----NVFRIAP--PLCITKEDIDFAVEYF 432 (442)
T ss_pred HHHHHHHHHHhC-eeeecccccc----eEEEecC--CeeccHHHHHHHHHHH
Confidence 347889999999 6667666666 4999999 5778999998777765
No 371
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.84 E-value=1e-06 Score=89.88 Aligned_cols=161 Identities=19% Similarity=0.181 Sum_probs=88.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC----------CcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM----------DNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~----------~~v~~v~~~ 73 (448)
.++||.|||+|+=.|+..++.+. +..|.+ +....|-...-.|-+..-+.+..|... ..+..+|.+
T Consensus 107 ~vFf~~sGSeAvEtAlKma~qY~----~~~G~p-~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P 181 (449)
T COG0161 107 HVFFTDSGSEAVETALKMALQYW----RARGQP-QRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAP 181 (449)
T ss_pred EEEEeCCchHHHHHHHHHHHHHH----HhcCCC-cceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCC
Confidence 47999999999999999998764 234432 111123334556666655555555210 012233332
Q ss_pred CC------CC------cCHHHHHHHHHHhhhcC-CCcEEEEEeccCCc-cccccC----HHHHHHHHHHcCCEEEEeccc
Q psy14299 74 ER------GQ------MICSFLEQTIQTSLAEK-KIPLFVNATAGTTV-LGAFDP----LDEIATVCEKYDLWMHVDACW 135 (448)
Q Consensus 74 ~~------g~------id~e~Le~~l~~~~~~~-~~~~lVv~~~~~t~-tG~~~~----l~~I~~ia~~~g~~l~VD~A~ 135 (448)
.. +. -..++|++.|.+ .+ .+..++++.-.--. .|.+.| ++++.++|++||++++.|+.-
T Consensus 182 ~~y~~~~~~~~~~~~~~~a~~le~~i~~---~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~ 258 (449)
T COG0161 182 YAYRRGFFGEGDEEFAEAADELEALILE---HGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVA 258 (449)
T ss_pred cccccCCCCCChHHHHHHHHHHHHHHHh---cCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecce
Confidence 21 11 124556666654 23 23444444443333 566655 899999999999999999953
Q ss_pred cc-c---cc-cccchhhhhcCCCCccEEEECCccccCC-CCceEEEEEecc
Q psy14299 136 GG-S---LI-FSEKYSFVLKGINRANSVSWNPHKMLGA-PLQCSILLIKEK 180 (448)
Q Consensus 136 ~~-~---~~-~~~~~~~~~~~~~~aD~~~~s~hK~l~~-P~g~G~l~vr~~ 180 (448)
.+ | .+ .++.+ ++ .-|++++ .|.|.+ -...|.++++++
T Consensus 259 tGFGRTG~~FA~e~~-----gi-~PDi~~~--aKGLT~GY~Pl~a~l~~~~ 301 (449)
T COG0161 259 TGFGRTGKMFACEHA-----GI-VPDILCL--AKGLTGGYLPLSAVLTSDR 301 (449)
T ss_pred eCCCcCchhhhhhhc-----CC-CCCeeee--cccccccchhhHhHhhhHH
Confidence 33 2 22 22222 22 2577775 565532 223455556554
No 372
>KOG0053|consensus
Probab=98.78 E-value=2.2e-07 Score=93.12 Aligned_cols=139 Identities=14% Similarity=0.123 Sum_probs=98.5
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH----HHHHHHHhCCCCCcEEEEecCCCCCcCH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS----MLKAAHWLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s----~~~~~~~~g~~~~~v~~v~~~~~g~id~ 80 (448)
++..++|..|+..++..... +++.|++...-+.- +.+.....|+ ....+..+ |+
T Consensus 95 ~l~fsSGmaA~~~al~~L~~--------------~g~~iV~~~~~Y~gT~~~l~~~~~~~gi---e~~~vd~~-----~~ 152 (409)
T KOG0053|consen 95 ALLFSSGMAAITVALLHLLP--------------AGDHIVATGDVYGGTLRILRKFLPKFGG---EGDFVDVD-----DL 152 (409)
T ss_pred EEEecccHHHHHHHHHHhcC--------------CCCcEEEeCCCcccHHHHHHHHHHHhCc---eeeeechh-----hH
Confidence 56777777777777665543 34445555444433 3344445566 45555554 67
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
+++++++++ ++++|.+..++|++..+.||++|.++||++|+.++||.+++.... .+.++ + +||+++-
T Consensus 153 ~~~~~~i~~------~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~-~~pL~-----l-GADIV~h 219 (409)
T KOG0053|consen 153 KKILKAIKE------NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYN-QDPLP-----L-GADIVVH 219 (409)
T ss_pred HHHHHhhcc------CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccc-cChhh-----c-CCCEEEE
Confidence 777777755 589999999999999999999999999999999999999997743 33222 1 4899999
Q ss_pred CCccccCCCCc--eEEEEEe
Q psy14299 161 NPHKMLGAPLQ--CSILLIK 178 (448)
Q Consensus 161 s~hK~l~~P~g--~G~l~vr 178 (448)
|..|++++... .|.+..+
T Consensus 220 SaTKyi~Ghsdvi~G~iv~n 239 (409)
T KOG0053|consen 220 SATKYIGGHSDVIGGSVVLN 239 (409)
T ss_pred eeeeeecCCcceeeeEEecC
Confidence 99999998644 2444443
No 373
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.74 E-value=1.2e-06 Score=85.99 Aligned_cols=285 Identities=14% Similarity=0.105 Sum_probs=167.2
Q ss_pred CccEEEeCcHHHHHH-HHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhC-CCCCcEEEEec---CCCC
Q psy14299 2 NLKPFLLPGGSISNM-YSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLG-IGMDNVIRVKT---NERG 76 (448)
Q Consensus 2 ~~~g~~t~ggT~an~-~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g-~~~~~v~~v~~---~~~g 76 (448)
|..++|.+||..+-+ ++.+...... ..+.|....-+..+...+-.+.. . ++..... +...
T Consensus 68 ~Y~VlflqGGat~qf~~~p~nLl~~~------------~~~yv~~g~Ws~~a~~eA~~~~~~~---~~~~~~~~~~~~~~ 132 (365)
T COG1932 68 DYKVLFLQGGATGQFAMAPMNLLGKR------------GTDYVDTGAWSEFAIKEAKKVGKQP---KLIDARIEEAGYGS 132 (365)
T ss_pred CceEEEEcCccHHHHHHHHHhhhccc------------CceeEeeeehhHhHHHHHHHhcccc---cccccceeccCccC
Confidence 456788888887733 3333333220 11125555555555555555443 2 2222221 1122
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC-HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCc
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP-LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRA 155 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~-l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~a 155 (448)
..+++..+ +.+ ....|.+++.+|.+|+.-| .+.+.. +..+++|.+..+...++|-. ..
T Consensus 133 iP~~~~~~--~~~------~~ayv~~~~NeTi~Gv~v~~~p~~~~-----~~~~v~D~SS~ilsr~iDvs--------k~ 191 (365)
T COG1932 133 IPDLSKWD--FSD------NDAYVHFCWNETISGVEVPELPDIGS-----DGLLVADASSAILSRPIDVS--------KY 191 (365)
T ss_pred CCChhhcc--cCC------CccEEEEecCCcccceEccCCCCCCC-----CceEEEecccHHhcCCCChh--------Hc
Confidence 34544443 221 1346999999999997655 222221 17899999888887766532 35
Q ss_pred cEEEECCccccCCCCceEEEEEeccchhhhhccC-CcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHH
Q psy14299 156 NSVSWNPHKMLGAPLQCSILLIKEKGLLHQANAT-AATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 234 (448)
Q Consensus 156 D~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g 234 (448)
|.+.++.+|.+| |.|.+++++|++ ++....+. .|+.+.-.. .......++.
T Consensus 192 dviyagaQKnlG-paGltvvIvr~~-~l~r~~~~~~P~if~y~~------------~~~~~s~yNT-------------- 243 (365)
T COG1932 192 DVIYAGAQKNLG-PAGLTVVIVRPD-LLERAESYTLPSIFDYLT------------HADNGSMYNT-------------- 243 (365)
T ss_pred ceEEEehhhccC-ccceEEEEEcHH-HHhcccccCCchHhhchh------------hhccCCccCC--------------
Confidence 899999999997 888999999775 45554332 222221100 0000000100
Q ss_pred HHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHh-cC
Q psy14299 235 FRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKAR-GN 313 (448)
Q Consensus 235 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 313 (448)
++...+.-+...++|+ ++
T Consensus 244 -------------------------------------------------------------Pptfa~y~~~lv~~Wlk~~ 262 (365)
T COG1932 244 -------------------------------------------------------------PPTFAWYLLGLVFKWLKSQ 262 (365)
T ss_pred -------------------------------------------------------------cHHHHHHHHHHHHHHHHHc
Confidence 0111222334566655 56
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhcCCCeEEec-cC-C-ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCc
Q psy14299 314 LGFRHFVDNAVDCSRYFLSQISQRPGFRLVI-PE-F-QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGT 390 (448)
Q Consensus 314 ~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~-~~-~-~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~ 390 (448)
-|++.+.++..+.++.+++.+.+. +|-... .+ . ...+++|.+..+. ++..+.+.+.++|.
T Consensus 263 GGl~~~~~rn~~ka~~LY~~id~s-~fy~~~v~~~~RS~mnV~f~~~~~~----------------ld~~fv~eae~~gl 325 (365)
T COG1932 263 GGLEALEARNQAKAQLLYDWIDKS-DFYRNLVAKANRSRMNVTFTLVDAE----------------LDKGFVAEAEAAGL 325 (365)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhC-CccccccchhhccceeEEEEcCcHH----------------HHHHHHHHHHHcCC
Confidence 679999999999999999999998 543211 11 1 2466777654322 33578888888884
Q ss_pred EEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 391 LMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 391 ~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
+...+ ++- .+.+|+|+ ......||++.|++-++++.+.
T Consensus 326 ~~lkG--hr~---vgGmRasi--ynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 326 IYLKG--HRS---VGGLRASI--YNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred ceecc--ccC---CCceeeee--ecCCCHHHHHHHHHHHHHHHHh
Confidence 44333 222 24499999 4567889999999999988764
No 374
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.66 E-value=3e-06 Score=80.75 Aligned_cols=92 Identities=15% Similarity=0.215 Sum_probs=63.9
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHcCCEEEEecccccccc---cccchhhhhc
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKYDLWMHVDACWGGSLI---FSEKYSFVLK 150 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~g~~l~VD~A~~~~~~---~~~~~~~~~~ 150 (448)
++|.++|+-. ..+-+|+++-++|+||-+ +.+.+|.++|++||+++++|-|||..+- +.|.... .
T Consensus 168 ~vDF~~l~i~--------e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~-w- 237 (417)
T COG3977 168 HVDFEHLHIG--------ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPL-W- 237 (417)
T ss_pred ccCHHHcccc--------cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceeccccccc-C-
Confidence 5666666432 356789999999999965 5588888999999999999999997542 2222111 1
Q ss_pred CCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 151 GINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
..-=.+++|..|....-.-||+++..++
T Consensus 238 --~~NiilC~SLSK~GLPG~R~GIiIane~ 265 (417)
T COG3977 238 --NENIILCMSLSKLGLPGSRCGIIIANEK 265 (417)
T ss_pred --CCCEEEEeehhhcCCCCcceeEEEccHH
Confidence 1123788999997664456787766443
No 375
>KOG1402|consensus
Probab=98.58 E-value=8.3e-06 Score=78.74 Aligned_cols=159 Identities=16% Similarity=0.119 Sum_probs=91.1
Q ss_pred EeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH---------HHHHHhCC-CCCcEEEEecCCCC
Q psy14299 7 LLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML---------KAAHWLGI-GMDNVIRVKTNERG 76 (448)
Q Consensus 7 ~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~---------~~~~~~g~-~~~~v~~v~~~~~g 76 (448)
=++.|.|++-.|+..+|.+.+ +.++++......+.+-..-|--.. .+..-.|- -+..+..||.+
T Consensus 121 pmnTGaEa~Eta~KLaR~wgy---~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~--- 194 (427)
T KOG1402|consen 121 PMNTGAEAVETACKLARKWGY---RKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG--- 194 (427)
T ss_pred ecccchhHHHHHHHHHHHHHH---hhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccC---
Confidence 356788999999999986532 333443111112222222221110 11111121 11126667766
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCC
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGI 152 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~ 152 (448)
|.++|+.+|+. ++....++.-..-.-|++-| ++++.++|++|+++++.|..|.+..-...-+......+
T Consensus 195 --d~eale~~l~~-----~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env 267 (427)
T KOG1402|consen 195 --DAEALEVALKS-----PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENV 267 (427)
T ss_pred --CHHHHHHHhcC-----CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhc
Confidence 89999999976 35666677666677787766 89999999999999999998887543211111111111
Q ss_pred CCccEEEECCccccC-CCCceEEEEEeccc
Q psy14299 153 NRANSVSWNPHKMLG-APLQCSILLIKEKG 181 (448)
Q Consensus 153 ~~aD~~~~s~hK~l~-~P~g~G~l~vr~~~ 181 (448)
.-|.+.+ .|.|. +-+..+.+++.++-
T Consensus 268 -~PDivil--gKalSGG~~Pvsavl~~~~i 294 (427)
T KOG1402|consen 268 -RPDIVIL--GKALSGGVYPVSAVLADDDI 294 (427)
T ss_pred -CCCeEEE--eccccCCeeeeEEEEecHHH
Confidence 3577775 46543 34445555564443
No 376
>KOG0633|consensus
Probab=98.56 E-value=3.8e-06 Score=78.64 Aligned_cols=88 Identities=13% Similarity=0.071 Sum_probs=67.0
Q ss_pred EEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHH
Q psy14299 43 MFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVC 122 (448)
Q Consensus 43 Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia 122 (448)
|+.-+.++..+.-.+...++ .|+.+|.+++..++.+++.+.++.+ ..++++.++++.|+||..--.+.|-++.
T Consensus 114 Il~cPPtysMY~v~A~iNd~---eVvkvpl~pdF~lnvdai~evl~~d----s~iK~~F~tSPgNPtg~~ik~~di~KiL 186 (375)
T KOG0633|consen 114 ILDCPPTYSMYVVDAAINDA---EVVKVPLNPDFSLNVDAIAEVLELD----SKIKCIFLTSPGNPTGSIIKEDDILKIL 186 (375)
T ss_pred eeecCCcceeEEEEeecCCc---eEEEecCCCCccccHHHHHHHHhcc----ccceEEEEcCCCCCCcccccHHHHHHHH
Confidence 44333343333333445566 7999999999999999999999874 3689999999999999988777777777
Q ss_pred HHc-CCEEEEeccccc
Q psy14299 123 EKY-DLWMHVDACWGG 137 (448)
Q Consensus 123 ~~~-g~~l~VD~A~~~ 137 (448)
.-- +..++||.|+--
T Consensus 187 e~p~nglVVvDEAYid 202 (375)
T KOG0633|consen 187 EMPDNGLVVVDEAYID 202 (375)
T ss_pred hCCCCcEEEEeeeeEe
Confidence 543 789999998653
No 377
>KOG1401|consensus
Probab=98.49 E-value=0.00022 Score=71.02 Aligned_cols=161 Identities=17% Similarity=0.126 Sum_probs=99.3
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCC---------cEEEEecCCC
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMD---------NVIRVKTNER 75 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~---------~v~~v~~~~~ 75 (448)
++|.++||+||..|+..||+.-..+... ..-..|......|---.-+....+..+. .+...+.+
T Consensus 119 vff~nsGTeAne~ALK~Ark~~~~~~~~-----~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~yn-- 191 (433)
T KOG1401|consen 119 VFFCNSGTEANETALKFARKFTGKKHPE-----KKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYN-- 191 (433)
T ss_pred EEEecCCcHHHHHHHHHHHHhhcccCCc-----cceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccC--
Confidence 6899999999999999999863211111 1112566666667544444433232110 12222322
Q ss_pred CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc--cC--HHHHHHHHHHcCCEEEEecccccccccccchhhhhcC
Q psy14299 76 GQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF--DP--LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKG 151 (448)
Q Consensus 76 g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~--~~--l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~ 151 (448)
|+.++++.++..++ ...+|++.-..-.-|.+ +| +..|.++|+++|+.++.|..+.+..-....|....-+
T Consensus 192 ---d~t~l~k~~~~h~~---~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~ 265 (433)
T KOG1401|consen 192 ---DSTALEKLFESHKG---EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFG 265 (433)
T ss_pred ---CHHHHHHHHHhCCC---ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhC
Confidence 79999999986321 24566666665544543 22 6788999999999999999887643333333322222
Q ss_pred CCCccEEEECCccccCCCCceEEEEEeccc
Q psy14299 152 INRANSVSWNPHKMLGAPLQCSILLIKEKG 181 (448)
Q Consensus 152 ~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~ 181 (448)
+ .-|+.++ -|.|++-...|+..++++.
T Consensus 266 ~-~PDI~t~--aK~L~gGlPigA~~v~~kV 292 (433)
T KOG1401|consen 266 V-TPDITTV--AKPLGGGLPIGATGVRDKV 292 (433)
T ss_pred c-CCcceee--hhhccCCceeEEEeehHHH
Confidence 2 2576664 6877776778888888863
No 378
>KOG0258|consensus
Probab=98.48 E-value=3.2e-05 Score=76.34 Aligned_cols=122 Identities=11% Similarity=0.049 Sum_probs=92.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
+.++|.|++.++...+...... +.+.|+++-.-++-+.....++|.... -.++.-+.+|.+|.++|
T Consensus 138 dI~LT~GAS~ai~~il~l~~~~-------------~~~GvliPiPQYPLYsAti~l~~~~~v-~YyLdEe~~W~ld~~el 203 (475)
T KOG0258|consen 138 DIFLTTGASPAIRSILSLLIAG-------------KKTGVLIPIPQYPLYSATISLLGGTQV-PYYLDEESNWSLDVAEL 203 (475)
T ss_pred HeeecCCCcHHHHHHHHHHhcC-------------CCCceEeecCCCchhHHHHHHhCCccc-ceeeccccCCCCCHHHH
Confidence 4678999999987777666553 445577775555555555667776432 22344445899999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHcCCEEEEecccccccc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKYDLWMHVDACWGGSLI 140 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~g~~l~VD~A~~~~~~ 140 (448)
++.+++.. .+.+|+++++..+-|+||.+ ..|++|..+|+++|+.++-|..|--+.+
T Consensus 204 ~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy 262 (475)
T KOG0258|consen 204 ERSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVY 262 (475)
T ss_pred HHHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhcc
Confidence 99999876 67789999999999999955 6799999999999999999997554443
No 379
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.45 E-value=0.00019 Score=79.52 Aligned_cols=97 Identities=15% Similarity=0.187 Sum_probs=57.8
Q ss_pred HHHHHHHHHhh--hcCCCcEEEEEecc-CCccccccC----HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCC
Q psy14299 81 SFLEQTIQTSL--AEKKIPLFVNATAG-TTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGIN 153 (448)
Q Consensus 81 e~Le~~l~~~~--~~~~~~~lVv~~~~-~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~ 153 (448)
+.+++.|++.. ..+.+..+|++.-. ....|.+.| +++|.++|++||+++|+|+.+.+.--....+.....++
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv- 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGC- 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCC-
Confidence 45666664311 11234445555442 344566644 89999999999999999998776432221111111233
Q ss_pred CccEEEECCccccCCC-CceEEEEEecc
Q psy14299 154 RANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 154 ~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
..|++++ -|.+++- ...|.++++++
T Consensus 646 ~PDIi~~--gKgLtgG~~Plaa~l~~~~ 671 (817)
T PLN02974 646 KPDIACY--AKLLTGGLVPLAATLATEE 671 (817)
T ss_pred CCCEEee--cccccCCCCccEEEEEcHH
Confidence 3688886 6877654 35778777664
No 380
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.43 E-value=4e-05 Score=75.85 Aligned_cols=145 Identities=13% Similarity=0.034 Sum_probs=98.6
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC--CCCCcCHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN--ERGQMICSF 82 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~--~~g~id~e~ 82 (448)
.+=|+|||-|+-++.-..... .|+..|++|+.+...-.....-.|+ ++.+.|.- ++..+|.+.
T Consensus 97 t~Qt~GGTGAL~~~A~fl~~~------------~~~~~vwis~PtW~NH~~If~~aGl---~v~~Y~Yyd~~~~~~df~~ 161 (396)
T COG1448 97 TVQTLGGTGALRVAADFLARF------------FPDATVWISDPTWPNHKAIFEAAGL---EVETYPYYDAETKGLDFDG 161 (396)
T ss_pred heecCCcchHHHHHHHHHHHh------------CCCceEEeCCCCcHhHHHHHHhcCC---ceeeeeccccccccccHHH
Confidence 456899999988887655554 2666799999888777777777888 67666652 245689999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCcccc---ccCHHHHHHHHHHcCCEEEEeccccccccccc--chhhh--hcCCCCc
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGA---FDPLDEIATVCEKYDLWMHVDACWGGSLIFSE--KYSFV--LKGINRA 155 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~---~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~--~~~~~--~~~~~~a 155 (448)
+...|++. .....++.=..+.||||. .+..++|.++.++.|..-++|-||-+..--.+ .+..+ .... .-
T Consensus 162 mla~L~~a---~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~-~~ 237 (396)
T COG1448 162 MLADLKTA---PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVG-PE 237 (396)
T ss_pred HHHHHHhC---CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhC-Cc
Confidence 99988774 223333444557899995 45678899999999999999999665433222 22111 1111 11
Q ss_pred cEEEECCccccCC
Q psy14299 156 NSVSWNPHKMLGA 168 (448)
Q Consensus 156 D~~~~s~hK~l~~ 168 (448)
=+++.|+.|.++-
T Consensus 238 ~lva~S~SKnfgL 250 (396)
T COG1448 238 LLVASSFSKNFGL 250 (396)
T ss_pred EEEEehhhhhhhh
Confidence 3677889997653
No 381
>KOG3843|consensus
Probab=98.43 E-value=3.3e-06 Score=79.12 Aligned_cols=153 Identities=16% Similarity=0.103 Sum_probs=101.5
Q ss_pred EEeCcHH-HHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec--CCC-CCcCHH
Q psy14299 6 FLLPGGS-ISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT--NER-GQMICS 81 (448)
Q Consensus 6 ~~t~ggT-~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~--~~~-g~id~e 81 (448)
+.+|=+| |+.-+++...|.+. | +...|+-.+....|-.+...-.|..+ +.++. +.| -.-|++
T Consensus 79 ~vvpl~tgmslslc~~s~r~kr-p----------kakyiiw~ridqks~~ksi~~agfep---iiie~i~d~d~l~tdle 144 (432)
T KOG3843|consen 79 FVVPLATGMSLSLCFLSLRHKR-P----------KAKYIIWLRIDQKSCFKSIIHAGFEP---IIIENILDGDELITDLE 144 (432)
T ss_pred eEEeccccccHHHHHHHHhhcC-C----------cccEEEEEecchHHHHHHHHhcCCCc---eeeeccccchHHHHhHH
Confidence 3444444 66666666666542 1 22346667888899889888888853 33332 222 366999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCcc---ccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVL---GAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~t---G~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
.+++.+++. .+..+.+.+.+|.. -.-+.+++|+.+|..|+++.+|.-|||.-.-..-+.-..-...+.+|.+
T Consensus 145 av~~~iee~-----g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~grida~ 219 (432)
T KOG3843|consen 145 AVEAIIEEL-----GEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAF 219 (432)
T ss_pred HHHHHHHHh-----CCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhccHHHH
Confidence 999999873 24455555555532 2557899999999999999999999997432111111111223468999
Q ss_pred EECCccccCCCCceEEEEE
Q psy14299 159 SWNPHKMLGAPLQCSILLI 177 (448)
Q Consensus 159 ~~s~hK~l~~P~g~G~l~v 177 (448)
+.|..|.+..|.|..++..
T Consensus 220 vqsldknf~vpvggaiia~ 238 (432)
T KOG3843|consen 220 VQSLDKNFMVPVGGAIIAA 238 (432)
T ss_pred HHHhhhcceeecchhHhhH
Confidence 9999999999998777544
No 382
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.39 E-value=3.3e-06 Score=84.46 Aligned_cols=157 Identities=14% Similarity=0.167 Sum_probs=104.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.+.++++.+.+++..+.+.... ...+-..| -+++ -.|+.+..++++.|. +++.+. ..++-...++
T Consensus 85 a~~ivnnn~aAVll~~~al~~~-~EvVis~g--------~lV~-gg~~~v~d~~~~aG~---~l~EvG--~tn~t~~~d~ 149 (395)
T COG1921 85 AAAIVNNNAAAVLLTLNALAEG-KEVVVSRG--------ELVE-GGAFRVPDIIRLAGA---KLVEVG--TTNRTHLKDY 149 (395)
T ss_pred heeeECCcHHHHHHHHhhhccC-CeEEEEcc--------cccc-CCCCChhHHHHHcCC---EEEEec--ccCcCCHHHH
Confidence 4667777777766665444331 00000000 1223 578999999999998 565554 4566788999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCcccc--ccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGA--FDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~--~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+.+|.+ ++.++.-++.++. |. .-++++++++||+||+++++|.|.|.-.-.-+..+..+. .++|.+++|
T Consensus 150 ~~AIne------~ta~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la--~GaDLV~~S 220 (395)
T COG1921 150 ELAINE------NTALLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALA--LGADLVSFS 220 (395)
T ss_pred HHHhcc------CCeeEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHh--cCCCEEEEe
Confidence 999976 4667766776653 53 356788999999999999999988765332222222222 258999999
Q ss_pred CccccCCCCceEEEEEeccchhhhh
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQA 186 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~ 186 (448)
++|.|++|. .|++.. ++++....
T Consensus 221 gdKllgGPq-aGii~G-kKelI~~l 243 (395)
T COG1921 221 GDKLLGGPQ-AGIIVG-KKELIEKL 243 (395)
T ss_pred cchhcCCCc-cceEec-hHHHHHHH
Confidence 999999997 666655 55666443
No 383
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.38 E-value=8e-05 Score=72.92 Aligned_cols=138 Identities=17% Similarity=0.197 Sum_probs=87.3
Q ss_pred CCeEEEecCCCchHHHHHHH-HhCCCCCcEEEEecC----------CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCC
Q psy14299 39 PPLCMFTSEDSHYSMLKAAH-WLGIGMDNVIRVKTN----------ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTT 107 (448)
Q Consensus 39 ~~~~Vl~~~~~H~s~~~~~~-~~g~~~~~v~~v~~~----------~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t 107 (448)
|+.+.++..+.|...-.+-. ..|. .++-++++ -.|.+|++.|++.|++-..+ .-|.++....+++
T Consensus 122 pg~~~~~~sN~~FdTTr~h~~~ng~---~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~-nvp~I~~tiT~Ns 197 (471)
T COG3033 122 PGSKMVAFSNYHFDTTRGHIQINGA---TPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGAD-NVPYIVLTITNNS 197 (471)
T ss_pred CCccccccccceecchhHHHHhcCC---ccccccccccccccccCCCCCccCHHHHHHHHHHhCcc-cCcEEEEEEeccc
Confidence 44445556678876655543 3343 23333333 24789999999999874322 2344444444555
Q ss_pred ccc---cccCHHHHHHHHHHcCCEEEEeccccc-ccccccchhh-----hhc-----CCCCccEEEECCccccCCCCceE
Q psy14299 108 VLG---AFDPLDEIATVCEKYDLWMHVDACWGG-SLIFSEKYSF-----VLK-----GINRANSVSWNPHKMLGAPLQCS 173 (448)
Q Consensus 108 ~tG---~~~~l~~I~~ia~~~g~~l~VD~A~~~-~~~~~~~~~~-----~~~-----~~~~aD~~~~s~hK~l~~P~g~G 173 (448)
.-| .+..++++.++|++|++++++|+|.-+ ++.++.+... .+. -++.+|.++.|+-|=..++. .|
T Consensus 198 agGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnm-GG 276 (471)
T COG3033 198 AGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNM-GG 276 (471)
T ss_pred cCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceecc-cc
Confidence 455 568899999999999999999998544 3333322111 111 12358999999999777776 36
Q ss_pred EEEEeccc
Q psy14299 174 ILLIKEKG 181 (448)
Q Consensus 174 ~l~vr~~~ 181 (448)
++..+++.
T Consensus 277 fl~~~D~~ 284 (471)
T COG3033 277 FLCFKDDS 284 (471)
T ss_pred EEEecCcc
Confidence 77787774
No 384
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.26 E-value=8.1e-05 Score=74.83 Aligned_cols=167 Identities=19% Similarity=0.125 Sum_probs=95.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC---------CCCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI---------GMDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~---------~~~~v~~v~~~~ 74 (448)
.++|+++||+||-.|+..++.+...... . ....++-.....|-...-+....+- ....+..+|.+.
T Consensus 78 ~v~f~~sGseAve~Alkla~~~~~~~~~-~----~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~ 152 (339)
T PF00202_consen 78 RVFFANSGSEAVEAALKLARQYHNKRAY-T----GRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPD 152 (339)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTHH-H----TTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTC
T ss_pred eeeeccCchHHHHHHHHHhhcccccccc-c----CCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCc
Confidence 4789999999999999999822100000 0 1333444555666544333333211 112356667652
Q ss_pred CCC-----cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccch
Q psy14299 75 RGQ-----MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKY 145 (448)
Q Consensus 75 ~g~-----id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~ 145 (448)
... -..+.+++.+.+.. .....+|++.-.....|...+ +++|.++|++||+++++|+.+.+......-+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~--~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~ 230 (339)
T PF00202_consen 153 PAADEEEQACLNALEELIAALN--ADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF 230 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--GGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS
T ss_pred cchhhhHHHHHHHHHHHHHhhc--CCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc
Confidence 111 01122444443321 224556777666665665433 7999999999999999999887643211111
Q ss_pred hhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 146 SFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 146 ~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
.....++ ..|+++++ |.+++-...|.++.+++
T Consensus 231 a~~~~gv-~PDiv~~g--K~l~gG~p~sav~~~~~ 262 (339)
T PF00202_consen 231 ASEHYGV-DPDIVTFG--KGLGGGLPISAVLGSEE 262 (339)
T ss_dssp GHHHHTS-SSSEEEEE--GGGGTTSSEEEEEEEHH
T ss_pred ceecccc-cCcccccc--cchhhhhhcccccccch
Confidence 2222344 36999986 88876688888888775
No 385
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.22 E-value=0.00078 Score=67.10 Aligned_cols=135 Identities=11% Similarity=0.062 Sum_probs=80.0
Q ss_pred CCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEE-eccCCccccccCHHH
Q psy14299 39 PPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNA-TAGTTVLGAFDPLDE 117 (448)
Q Consensus 39 ~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~-~~~~t~tG~~~~l~~ 117 (448)
+....+|+...+---...|+.+|+ +.+.||.+++|. |++.+|+.+.++ ...|.+-+ ---+|++|....=+-
T Consensus 123 ~~vKfLCPvPGYDRHFai~E~~Gi---emi~VpM~~dGP-DmD~Ve~LV~~D----~svKGiWcVP~ySNPtG~tySde~ 194 (425)
T PF12897_consen 123 EKVKFLCPVPGYDRHFAITEHFGI---EMIPVPMTEDGP-DMDMVEELVAED----PSVKGIWCVPKYSNPTGITYSDEV 194 (425)
T ss_dssp S--EEEEEES--HHHHHHHHHCT----EEEEEEEETTEE--HHHHHHHTHTS----TTEEEEEE-SSS-TTT-----HHH
T ss_pred cCceEEecCCCchHHHHHHHhhCc---EEEecCCCCCCC-CHHHHHHHHhcC----CccceEEeCCCccCCCCccCCHHH
Confidence 456789998887777888999999 899999988874 999999999764 34555443 446788998866555
Q ss_pred HHHHH----HHcCCEEEEecccccccccccchh----h---hh--cCCCCccEEEECCccccCCCCceEEEEEeccc
Q psy14299 118 IATVC----EKYDLWMHVDACWGGSLIFSEKYS----F---VL--KGINRANSVSWNPHKMLGAPLQCSILLIKEKG 181 (448)
Q Consensus 118 I~~ia----~~~g~~l~VD~A~~~~~~~~~~~~----~---~~--~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~ 181 (448)
+.+++ ...+..++.|-||..+++..+... . .+ .|...-=+...|..|.-+.-.|.+++..+...
T Consensus 195 vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~N 271 (425)
T PF12897_consen 195 VRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEAN 271 (425)
T ss_dssp HHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHH
T ss_pred HHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHH
Confidence 55555 457999999999999988322111 0 01 12212225667888987776777777776653
No 386
>KOG2040|consensus
Probab=98.12 E-value=0.00026 Score=73.97 Aligned_cols=262 Identities=13% Similarity=0.107 Sum_probs=156.7
Q ss_pred EEEecCCCchHHHHHHHHh--CCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHH
Q psy14299 42 CMFTSEDSHYSMLKAAHWL--GIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIA 119 (448)
Q Consensus 42 ~Vl~~~~~H~s~~~~~~~~--g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~ 119 (448)
..+++...|+.....++-- +.+ +. +.+. |+++...-. +....|.+..+.| .|.+.|..++.
T Consensus 207 k~vvd~~~hpqtlsV~~TRa~~~~---i~-v~~~-----~~~~~~~s~-------~~v~gvlvQYP~t-~G~i~d~~el~ 269 (1001)
T KOG2040|consen 207 KFVVDSNCHPQTLSVVKTRAKGFG---IK-VVVS-----DIKEADYSS-------KDVSGVLVQYPDT-EGSVLDFDELV 269 (1001)
T ss_pred eEEecCCCCcchhhhhhccccccc---ee-EEec-----CHHHhhccc-------cceeEEEEEcCCC-CCcccCHHHHH
Confidence 4788999999888777632 221 21 1111 333222211 2366788888888 89999999999
Q ss_pred HHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCccccCCCCceEE-----EEEeccchhhhhccCCcccc
Q psy14299 120 TVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSI-----LLIKEKGLLHQANATAATYL 194 (448)
Q Consensus 120 ~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~-----l~vr~~~~~~~~~~~~~~y~ 194 (448)
+.+++.|..+++-.-.-+..+.-+. +-=++|+.+.|++.+ |.|.|-|. |.+++. +.. ..|+-+
T Consensus 270 ~~a~~~~s~vv~atDLLaLtiLrpP------gefGaDIavGSsQRF-GVPlGYGGPHAaFfAv~~~--l~R---~mPGRi 337 (1001)
T KOG2040|consen 270 ELAHANGSLVVMATDLLALTILRPP------GEFGADIAVGSSQRF-GVPLGYGGPHAAFFAVSES--LVR---MMPGRI 337 (1001)
T ss_pred HHhhccCceEEEeehhhHHHccCCh------hhcCceeeecccccc-CccccCCCchHHHHHHHHH--HHh---hCCCce
Confidence 9999999886653211111111111 111589999999884 55666553 333321 222 122222
Q ss_pred cccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH---HHhhhhccCCCccchhhhhhhhhhhhhhhhhh
Q psy14299 195 FQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV---DNAVDCSRGSMTFSTLLCFDLQGLLHQANATA 271 (448)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (448)
-.-+ -...|...++-++ ++++++-++.+++|+- |-++ ||
T Consensus 338 iGvt----------------------------kD~~gk~a~RLALQTREQHIrRDKATSNICTA-----QALL--AN--- 379 (1001)
T KOG2040|consen 338 IGVT----------------------------KDALGKEAYRLALQTREQHIRRDKATSNICTA-----QALL--AN--- 379 (1001)
T ss_pred Eeee----------------------------ecccccHHHHHHHHHHHHHhhhhccchhhhHH-----HHHH--HH---
Confidence 1111 0122334444333 5788888899999982 1111 11
Q ss_pred hhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceee
Q psy14299 272 ATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTN 351 (448)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~ 351 (448)
..+..-=|-|.+|++++.++.+.++.++...|+.. |-++. ..+.+-+
T Consensus 380 -------------------------------maAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~-~k~fFDT 426 (1001)
T KOG2040|consen 380 -------------------------------MAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQ-HKPFFDT 426 (1001)
T ss_pred -------------------------------HHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhc-cccccce
Confidence 11222236799999999999999999999999986 77777 6555555
Q ss_pred EEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHH
Q psy14299 352 ICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIE 430 (448)
Q Consensus 352 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~ 430 (448)
+-++... -..++.++-.++.+ ....... +.+-+++ -..++++|+|.|+..+.
T Consensus 427 LkI~~~~------------------s~~~~l~rA~~~~i---Nlr~~ed----~tigvsl--DETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 427 LKIRCGC------------------SAEEVLDRAAKRQI---NLRLVED----GTIGVSL--DETVTEKDVDDLLWVFN 478 (1001)
T ss_pred EEEEecC------------------cHHHHHHHHHhhcC---ceEEeec----CceEEee--cccccHHHHHHHHHHHc
Confidence 5554321 11255666555552 1122222 4677888 57899999999999887
No 387
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.02 E-value=0.00011 Score=72.63 Aligned_cols=152 Identities=14% Similarity=0.131 Sum_probs=91.5
Q ss_pred CcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEE-ecCCCchHHHHHHHHhCCC-------CCcEEEEecCCCCCcCH
Q psy14299 9 PGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMF-TSEDSHYSMLKAAHWLGIG-------MDNVIRVKTNERGQMIC 80 (448)
Q Consensus 9 ~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl-~~~~~H~s~~~~~~~~g~~-------~~~v~~v~~~~~g~id~ 80 (448)
.+||.|+-.++....+ |++.++ +.-.-+-.+.+..-+.|-+ ...+..++..++|.+|.
T Consensus 79 vSGTHAi~~~Lfg~Lr--------------pGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~ 144 (403)
T PF06838_consen 79 VSGTHAIALALFGVLR--------------PGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDW 144 (403)
T ss_dssp -SHHHHHHHHHHHH----------------TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-H
T ss_pred cchHHHHHHHHHhcCC--------------CCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCH
Confidence 4799999999877666 445444 3434444455544322210 12689999999999999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCc----cccccCHHHHHHHHHHc--CCEEEEecccccccccccchhhhhcCCCC
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTV----LGAFDPLDEIATVCEKY--DLWMHVDACWGGSLIFSEKYSFVLKGINR 154 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~----tG~~~~l~~I~~ia~~~--g~~l~VD~A~~~~~~~~~~~~~~~~~~~~ 154 (448)
+.+++++++ ++++|.+.-..-. +=.+++|+++++++|+. +++++||-+||-..-..+.-. + +
T Consensus 145 ~~i~~~~~~------~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~~-----v-G 212 (403)
T PF06838_consen 145 EAIKKALKP------NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEPTE-----V-G 212 (403)
T ss_dssp HHHHHHHHT------TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GGG-----G-T
T ss_pred HHHHHhhcc------CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCccc-----c-c
Confidence 999999985 5778877542221 22567888888888876 789999999996654322111 1 5
Q ss_pred ccEEEECCccccCC-CCceEEEEEeccchhhhh
Q psy14299 155 ANSVSWNPHKMLGA-PLQCSILLIKEKGLLHQA 186 (448)
Q Consensus 155 aD~~~~s~hK~l~~-P~g~G~l~vr~~~~~~~~ 186 (448)
||.++.|.-|+.|+ -..+|..++.++++.+..
T Consensus 213 ADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~ 245 (403)
T PF06838_consen 213 ADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERA 245 (403)
T ss_dssp -SEEEEETTSGGGTTT-SS-EEEEESHHHHHHH
T ss_pred hhheeccceeCCCCCccCcCCEEechHHHHHHH
Confidence 89999999998654 355667667777665543
No 388
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=97.87 E-value=1.3e-05 Score=79.58 Aligned_cols=132 Identities=19% Similarity=0.153 Sum_probs=39.7
Q ss_pred EEEecCCCchH------HHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCc--ccc--
Q psy14299 42 CMFTSEDSHYS------MLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTV--LGA-- 111 (448)
Q Consensus 42 ~Vl~~~~~H~s------~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~--tG~-- 111 (448)
.|++++-+-.. +.+..+..|. +++.|-. ..+..+++.+++|.+ ++.++.-+|.+|. .|.
T Consensus 87 EvIvsRGelVeiGgsFRip~vm~~sGa---~lvEVGt--tN~t~~~Dye~AI~e------~Ta~ll~Vh~Sn~~i~GFt~ 155 (367)
T PF03841_consen 87 EVIVSRGELVEIGGSFRIPDVMRQSGA---RLVEVGT--TNRTHLSDYEKAITE------NTAALLKVHTSNFRIQGFTG 155 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccc---ccccccc--ccccccccccccccc------cccccccccccccccccccc
Confidence 35556544432 3344555555 5555553 234567889999976 4777878886665 342
Q ss_pred ccCHHHHHHHHHHcCCEEEEecccccccc----cccchhhhhcCC-CCccEEEECCccccCCCCceEEEEEeccchhhhh
Q psy14299 112 FDPLDEIATVCEKYDLWMHVDACWGGSLI----FSEKYSFVLKGI-NRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQA 186 (448)
Q Consensus 112 ~~~l~~I~~ia~~~g~~l~VD~A~~~~~~----~~~~~~~~~~~~-~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~ 186 (448)
--+++++.+++|+|++++++|.+.|...- ..+..+..-..+ .++|.+++|+.|.|++|- +|+++-|+ +++...
T Consensus 156 ~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk-~lI~~l 233 (367)
T PF03841_consen 156 EVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGKK-ELIEKL 233 (367)
T ss_dssp -----HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S--EEEEEEH-HHHHHH
T ss_pred cccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeCH-HHHHHH
Confidence 35799999999999999999987654321 111111111112 369999999999999987 68876655 455543
No 389
>KOG2790|consensus
Probab=97.78 E-value=0.00093 Score=63.64 Aligned_cols=262 Identities=14% Similarity=0.029 Sum_probs=157.1
Q ss_pred CCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CC-CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC-
Q psy14299 39 PPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RG-QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP- 114 (448)
Q Consensus 39 ~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g-~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~- 114 (448)
+-+.|+++.-+-.+..++-++.-. +.+..+..+ -| ..|++.++... .-..|..+..+|..|+-.|
T Consensus 99 ~AdYiVTGsWS~KA~~EAkk~~~~---~~V~~~~k~y~ygkvPd~~~w~~~~--------da~yvyyCaNETVHGVEf~~ 167 (370)
T KOG2790|consen 99 CADYVVTGSWSAKAAEEAKKYGTP---NIVIPKLKSYTYGKVPDPSTWELNP--------DASYVYYCANETVHGVEFDF 167 (370)
T ss_pred ccceEEeccccHHHHHHHHhhCCc---eEEeccccccccCcCCChhhcccCC--------CccEEEEecCceeeceecCC
Confidence 455688887777777777665433 222222221 12 34655554322 2348999999999997533
Q ss_pred HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccc
Q psy14299 115 LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYL 194 (448)
Q Consensus 115 l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~ 194 (448)
+. +-.-+|..++.|-+.-.-.-++|.. .-+.+....+|..+ |.|.-++++|++ ++.......|..+
T Consensus 168 ~P----~~~~~~~vlVaDmSSnflSrpvDvs--------k~gvi~aGAQKN~G-~aG~Tvvivr~d-llg~~~~~tP~v~ 233 (370)
T KOG2790|consen 168 IP----VNDPKGAVLVADMSSNFLSRPVDVS--------KFGVIFAGAQKNVG-PAGVTVVIVRKD-LLGNALDITPSVL 233 (370)
T ss_pred CC----CCCCCCceEEEecccchhcCCccch--------hcceEEeccccccC-ccccEEEEEehh-hhcccccCCcccc
Confidence 33 3344688999997655444444432 23688889999987 888888889775 4555444333332
Q ss_pred cccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhh
Q psy14299 195 FQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATY 274 (448)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (448)
.-... ....++-.+.+
T Consensus 234 dyk~~-------~~NnSlyNTpP--------------------------------------------------------- 249 (370)
T KOG2790|consen 234 DYKIM-------DKNNSLYNTPP--------------------------------------------------------- 249 (370)
T ss_pred ceeee-------ccccccccCCC---------------------------------------------------------
Confidence 21110 00001111111
Q ss_pred hhccccccccccCCCCCccccccchhhHHHHHHHHHh-cCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCc---ee
Q psy14299 275 LFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKAR-GNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQ---CT 350 (448)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~---~~ 350 (448)
...+....+.++|+ .+-|+..+.+...+.++.+++.|.+..||-....+|. .-
T Consensus 250 -----------------------~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~M 306 (370)
T KOG2790|consen 250 -----------------------CFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRM 306 (370)
T ss_pred -----------------------eeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhhhhhc
Confidence 11122233445544 5667999999999999999999999889865422332 36
Q ss_pred eEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHH
Q psy14299 351 NICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIE 430 (448)
Q Consensus 351 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~ 430 (448)
+++|+..+..+ ..++.+.-.+++. +..-.++.- +.+|.|+ .-..+-+++++|++-++
T Consensus 307 NV~Fri~~d~L----------------e~eFLkeA~~~~m--v~LKGhRSV---GGiRASl--YNAisv~~~q~L~~~m~ 363 (370)
T KOG2790|consen 307 NVPFRIEKDEL----------------EAEFLKEAAKEHM--VQLKGHRSV---GGIRASL--YNAISVEEVQKLAAFMK 363 (370)
T ss_pred ccceeecchHH----------------HHHHHHHHHHhhh--hcccccccc---ccchhhh--hccccHHHHHHHHHHHH
Confidence 68888753222 2356666555552 222223333 6799999 44678899999999999
Q ss_pred HHHHH
Q psy14299 431 LRGAE 435 (448)
Q Consensus 431 ~~~~~ 435 (448)
+..+.
T Consensus 364 ~F~k~ 368 (370)
T KOG2790|consen 364 EFQKK 368 (370)
T ss_pred HHHHh
Confidence 88764
No 390
>KOG1403|consensus
Probab=97.61 E-value=0.0064 Score=58.49 Aligned_cols=123 Identities=17% Similarity=0.097 Sum_probs=76.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHh--------CCC-CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWL--------GIG-MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~--------g~~-~~~v~~v~~~~ 74 (448)
..+|+++|+|||-+|+..||+.. ...++|.++...|--+....+.. +.. ++-++.-|+++
T Consensus 104 vc~F~NSGSEANDLALRLAR~ft-----------khqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPD 172 (452)
T KOG1403|consen 104 VCFFVNSGSEANDLALRLARNFT-----------KHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPD 172 (452)
T ss_pred EEEEecCCchhhHHHHHHHHhhc-----------ccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCcc
Confidence 36899999999999999999863 25567777777665433222221 111 22233334331
Q ss_pred ---------------CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccc
Q psy14299 75 ---------------RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACW 135 (448)
Q Consensus 75 ---------------~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~ 135 (448)
.+..-.+.+++.+++....+......+..+-.+--|.+-| ++++++..|.+|-..+.|..+
T Consensus 173 vyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQ 252 (452)
T KOG1403|consen 173 VYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQ 252 (452)
T ss_pred ccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhh
Confidence 1123346677777765544433333344444444565544 688999999999999999986
Q ss_pred cc
Q psy14299 136 GG 137 (448)
Q Consensus 136 ~~ 137 (448)
.+
T Consensus 253 vG 254 (452)
T KOG1403|consen 253 VG 254 (452)
T ss_pred hc
Confidence 55
No 391
>KOG1412|consensus
Probab=97.56 E-value=0.025 Score=54.86 Aligned_cols=159 Identities=10% Similarity=0.049 Sum_probs=97.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec--CCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT--NERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~--~~~g~id~e 81 (448)
.|+=+-+||-|+.++..-.-..+ ++..||+|.....+-...+.-.|.- .+...+. .+.-.+|.+
T Consensus 101 ~~vQslsGTGAl~~~A~Fl~~~~------------~~~~VY~SnPTW~nH~~if~~aGf~--tv~~Y~yWd~~~k~~d~e 166 (410)
T KOG1412|consen 101 FGVQSLSGTGALRIAADFLATFY------------NKNTVYVSNPTWENHHAIFEKAGFT--TVATYPYWDAENKCVDLE 166 (410)
T ss_pred cceeeccccchhhhhHHHHHHhc------------ccceeEecCCchhHHHHHHHHcCCc--eeeeeeeecCCCceecHH
Confidence 45667788888777654443332 4456999998887777777777752 3444443 234578999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCcccc---ccCHHHHHHHHHHcCCEEEEecccccccc---cccchhhhh---cCC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGA---FDPLDEIATVCEKYDLWMHVDACWGGSLI---FSEKYSFVL---KGI 152 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~---~~~l~~I~~ia~~~g~~l~VD~A~~~~~~---~~~~~~~~~---~~~ 152 (448)
.+...|+.. +.....+.-....|+||. .....+|+++.++++...+.|-|+-+.+- ..|.|..+. .+.
T Consensus 167 ~~Lsdl~~A---Pe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~ 243 (410)
T KOG1412|consen 167 GFLSDLESA---PEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGF 243 (410)
T ss_pred HHHHHHhhC---CCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCC
Confidence 998888763 112222333334788883 34478899999999999999998765443 233332221 121
Q ss_pred CCccEEEECCccccCC--C-CceEEEEEeccc
Q psy14299 153 NRANSVSWNPHKMLGA--P-LQCSILLIKEKG 181 (448)
Q Consensus 153 ~~aD~~~~s~hK~l~~--P-~g~G~l~vr~~~ 181 (448)
+ =+++-|+.|.+|- + .|+=-++++++.
T Consensus 244 e--~fv~QSFaKNfGlYneRvGnltvv~~n~a 273 (410)
T KOG1412|consen 244 E--LFVCQSFAKNFGLYNERVGNLTVVVNNPA 273 (410)
T ss_pred e--EEEEhhhhhhcccccccccceEEEecChh
Confidence 1 2667789997653 3 333334455543
No 392
>KOG1405|consensus
Probab=97.50 E-value=0.0023 Score=62.79 Aligned_cols=83 Identities=13% Similarity=0.069 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccc----cccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCC-
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG----AFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGIN- 153 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG----~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~- 153 (448)
.++++|+.|.+..+....+..+++.-..+.-| .-+-+..+.+++++||+.++||..|.++-....-|.+.-.+++
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 56788888887655544455566655555544 4456899999999999999999998876544333332222222
Q ss_pred CccEEEEC
Q psy14299 154 RANSVSWN 161 (448)
Q Consensus 154 ~aD~~~~s 161 (448)
..|.+++|
T Consensus 334 PpD~vTFS 341 (484)
T KOG1405|consen 334 PPDVVTFS 341 (484)
T ss_pred Cccceehh
Confidence 47887774
No 393
>KOG0629|consensus
Probab=96.77 E-value=0.0011 Score=66.46 Aligned_cols=59 Identities=64% Similarity=1.191 Sum_probs=55.2
Q ss_pred CCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhhhhcc
Q psy14299 189 TAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAVDCSR 247 (448)
Q Consensus 189 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~~~~~ 247 (448)
..+.|++++++.++.++|.+++.++++|+...+++|.+|++-|..|+++.+++.+++|+
T Consensus 346 ~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~ 404 (510)
T KOG0629|consen 346 MSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAE 404 (510)
T ss_pred cchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999998743
No 394
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=96.50 E-value=0.014 Score=56.22 Aligned_cols=151 Identities=12% Similarity=0.111 Sum_probs=94.1
Q ss_pred CcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeE-EEecCCCchHHHHHHHHhCCC-------CCcEEEEecCCCCCcCH
Q psy14299 9 PGGSISNMYSICLARYRLDPDTKRKGLSHLPPLC-MFTSEDSHYSMLKAAHWLGIG-------MDNVIRVKTNERGQMIC 80 (448)
Q Consensus 9 ~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~-Vl~~~~~H~s~~~~~~~~g~~-------~~~v~~v~~~~~g~id~ 80 (448)
-+||.|+-.|+....+ |++. +++.-.-+-.+.+..-+-|-+ ......+|...+|.+|.
T Consensus 90 isGTHAI~~aLfg~LR--------------pgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gkiD~ 155 (416)
T COG4100 90 ISGTHAIACALFGILR--------------PGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKIDI 155 (416)
T ss_pred ecchhHHHHHHHhccC--------------CCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeecccccCCcccH
Confidence 3678888777765444 3333 343333333444433222210 12688899999999999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccC----CccccccCHHHHHHHHHHc--CCEEEEecccccccccccchhhhhcCCCC
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGT----TVLGAFDPLDEIATVCEKY--DLWMHVDACWGGSLIFSEKYSFVLKGINR 154 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~----t~tG~~~~l~~I~~ia~~~--g~~l~VD~A~~~~~~~~~~~~~~~~~~~~ 154 (448)
+.++..+.+ ++++|.+.-.. -++=.+.+|+++.++.|+- ++.++||-++|-..-..+. . .+ +
T Consensus 156 ~~v~~~i~~------~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~EP--t---~v-G 223 (416)
T COG4100 156 QAVKTAISD------RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEKEP--T---HV-G 223 (416)
T ss_pred HHHHHhcCc------cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhccCc--c---cc-c
Confidence 999999975 57777765422 2233668888888888885 6899999999865432221 0 11 5
Q ss_pred ccEEEECCccccCCC-CceEEEEEeccchhhh
Q psy14299 155 ANSVSWNPHKMLGAP-LQCSILLIKEKGLLHQ 185 (448)
Q Consensus 155 aD~~~~s~hK~l~~P-~g~G~l~vr~~~~~~~ 185 (448)
+|.+..|.-|.-++- .-+|..+..+.++...
T Consensus 224 aDliAGSLIKNpGGgiaktGGYiaGk~~~ve~ 255 (416)
T COG4100 224 ADLIAGSLIKNPGGGIAKTGGYIAGKAELVEA 255 (416)
T ss_pred hhhhccceeeCCCCceeeccceeechHHHHHh
Confidence 899999999975542 2334444444455443
No 395
>KOG1411|consensus
Probab=93.57 E-value=1.1 Score=44.42 Aligned_cols=124 Identities=8% Similarity=0.051 Sum_probs=74.8
Q ss_pred CCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc---cccCH
Q psy14299 39 PPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG---AFDPL 115 (448)
Q Consensus 39 ~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG---~~~~l 115 (448)
+...|+++..+...-.+.-...|+....+++.. .....+|.+.+.+.+.+. .....++.=....|+|| .....
T Consensus 145 ~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd-~~t~gld~~g~ledl~~~---p~gs~ilLhaCaHNPTGvDPt~eqw 220 (427)
T KOG1411|consen 145 PSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYD-PKTRGLDFKGMLEDLGEA---PEGSIILLHACAHNPTGVDPTKEQW 220 (427)
T ss_pred cccceeecCCcccccCccccccCcceeeeeecc-ccccccchHHHHHHHhcC---CCCcEEEeehhhcCCCCCCccHHHH
Confidence 455688888776555555556666322222222 345678888877777653 22233444455778888 34668
Q ss_pred HHHHHHHHHcCCEEEEecccccccc---cccchhhh---hcCCCCccEEEECCccccCC
Q psy14299 116 DEIATVCEKYDLWMHVDACWGGSLI---FSEKYSFV---LKGINRANSVSWNPHKMLGA 168 (448)
Q Consensus 116 ~~I~~ia~~~g~~l~VD~A~~~~~~---~~~~~~~~---~~~~~~aD~~~~s~hK~l~~ 168 (448)
++|.++.++.+..-++|.|+-+.+. .-|.+..+ -+|. -=.++.|..|.+|-
T Consensus 221 ~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~--~~~laQSyAKNMGL 277 (427)
T KOG1411|consen 221 EKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGH--EILLAQSYAKNMGL 277 (427)
T ss_pred HHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCC--ceEeehhhhhhcch
Confidence 8899999999999999998776543 11221111 1121 12566788897653
No 396
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=88.64 E-value=28 Score=34.85 Aligned_cols=148 Identities=8% Similarity=0.009 Sum_probs=72.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..+|.+|+|...+.++.++-.... .. .+...|+.....++++.....++.- ....+.-|.. ..
T Consensus 68 ~IV~GtGsTQL~~AalyALSp~~~----~~----~~p~~VVa~aPYY~~Y~~qt~~f~s---~~y~w~Gda~------~~ 130 (363)
T PF04864_consen 68 YIVFGTGSTQLFNAALYALSPNAS----PS----SSPASVVAAAPYYSSYPEQTDFFDS---RLYKWAGDAS------NF 130 (363)
T ss_dssp EEEEECHHHHHHHHHHHHHCHHT-----TT----SSSEEEEE-SS--CHHHHHCCCT-B---TTEEEEEECC------CG
T ss_pred EEEEcCCHHHHHHHHHHhcCCCCC----CC----CCCceeEecCCCccchHHHHHhccc---cCccccccHH------hh
Confidence 357888888887666665432200 00 1344566554444444444444432 1223332211 11
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccc-cccchhhhhcCCCCccEEEECC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLI-FSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~-~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
. .+ .+..+.+=+++.|+|+.|.+.. .+++.-+..++-|-||.+.++ +++. + ..=|++.++.
T Consensus 131 ~---~~---~~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYYWPhyTpI~~-~------aD~DiMLFT~ 192 (363)
T PF04864_consen 131 K---NS---DNPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYYWPHYTPITA-P------ADHDIMLFTL 192 (363)
T ss_dssp T---T----S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS---S--------B--SEEEEEH
T ss_pred c---cC---CCCCCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeeecccccccCC-C------CCCceEEEEE
Confidence 1 11 1235778899999999997632 123556677899999998766 2221 1 1238999999
Q ss_pred ccc-cCCCCceEEEEEeccchhhhh
Q psy14299 163 HKM-LGAPLQCSILLIKEKGLLHQA 186 (448)
Q Consensus 163 hK~-l~~P~g~G~l~vr~~~~~~~~ 186 (448)
.|. +.+-.-.|..++++++.-.++
T Consensus 193 SK~TGHAGSR~GWAlVKD~~Va~kM 217 (363)
T PF04864_consen 193 SKLTGHAGSRFGWALVKDEEVAKKM 217 (363)
T ss_dssp HHHCS-GGG-EEEEEES-HHHHHHH
T ss_pred ecccCccccccceeeecCHHHHHHH
Confidence 994 444445677889988665443
No 397
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=81.80 E-value=0.73 Score=46.96 Aligned_cols=59 Identities=36% Similarity=0.529 Sum_probs=45.1
Q ss_pred hhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 262 GLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
..+..+....+.|++.+.+-++...+..++.++|.|...++++|..|+..|.+|+++++
T Consensus 279 ~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i 337 (373)
T PF00282_consen 279 SDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERI 337 (373)
T ss_dssp GGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHhccChhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHH
Confidence 34445555567888877766777788889999999999999999999999999876643
No 398
>KOG0630|consensus
Probab=66.23 E-value=10 Score=39.51 Aligned_cols=48 Identities=21% Similarity=0.358 Sum_probs=45.3
Q ss_pred cchhhHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEec
Q psy14299 297 RKVDAFKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVI 344 (448)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~ 344 (448)
+..+.+-+|+++++++..-+.++++....+.+.+.+.+++++++++++
T Consensus 393 ekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig 440 (838)
T KOG0630|consen 393 EKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIG 440 (838)
T ss_pred HhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEec
Confidence 468899999999999999999999999999999999999999999985
No 399
>PLN02590 probable tyrosine decarboxylase
Probab=63.25 E-value=7.5 Score=41.64 Aligned_cols=56 Identities=23% Similarity=0.379 Sum_probs=40.4
Q ss_pred hhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 265 HQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
.++-...+.|+-.+...++..++..+..++|+|...++++|.+|+..|.+|+++++
T Consensus 375 ~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i 430 (539)
T PLN02590 375 IDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFI 430 (539)
T ss_pred HHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455677322222344577888999999999999999999999999977654
No 400
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=59.71 E-value=83 Score=31.04 Aligned_cols=120 Identities=21% Similarity=0.183 Sum_probs=65.9
Q ss_pred CccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCC----chHHHHHHHHhCCCCCcEEEEecCCCC-
Q psy14299 2 NLKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDS----HYSMLKAAHWLGIGMDNVIRVKTNERG- 76 (448)
Q Consensus 2 ~~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~----H~s~~~~~~~~g~~~~~v~~v~~~~~g- 76 (448)
+++-++|-||..||..-..++... +.|+. -+.++..-. -.-......+.|. .++.++...+.
T Consensus 63 g~dTlvT~GgiQSNh~r~tAavA~------~lGl~----~v~ile~~~~~y~~ngn~Ll~~l~G~---~~~~~~~~~d~~ 129 (323)
T COG2515 63 GADTLVTYGGIQSNHVRQTAAVAA------KLGLK----CVLILENIEANYLLNGNLLLSKLMGA---EVRAVDAGTDIG 129 (323)
T ss_pred CCcEEEEecccchhHHHHHHHHHH------hcCCc----EEEEEeccccccccccchhhhhhcCc---eEEEecCCCChh
Confidence 456789999999998765444432 12431 223322222 0113444456666 67777766555
Q ss_pred -CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHc-CCEEEEecccccc
Q psy14299 77 -QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKY-DLWMHVDACWGGS 138 (448)
Q Consensus 77 -~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~-g~~l~VD~A~~~~ 138 (448)
....+.+.+.+++ ++.+| .|+...++++.|.+ .-..||.+-++++ .+-.+|.++-+++
T Consensus 130 ~~~~~~~~~e~~~~---~g~kp-yvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~~~fD~vVva~gs~g 192 (323)
T COG2515 130 INASAEELAEEVRK---QGGKP-YVIPEGGSSPLGALGYVRLALEIAEQAEQLLKFDSVVVAPGSGG 192 (323)
T ss_pred hchhhHHHHHHHHh---cCCCC-cEeccCCcCccccccHHHHHHHHHHHHhhccCCCEEEEeCCCcc
Confidence 3344445554443 56666 56666668885554 5556666666653 3445555544443
No 401
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=58.45 E-value=1.2e+02 Score=31.26 Aligned_cols=131 Identities=12% Similarity=0.191 Sum_probs=75.2
Q ss_pred eEEEecCCCch-HHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCc--------ccc
Q psy14299 41 LCMFTSEDSHY-SMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTV--------LGA 111 (448)
Q Consensus 41 ~~Vl~~~~~H~-s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~--------tG~ 111 (448)
.++|++-.+-. .+..-+..+|+...++...+- .+++++.+.+++ .+|.++++.+..|. .|.
T Consensus 122 ~vLYVsGEES~~QiklRA~RL~~~~~~l~l~aE-----t~~e~I~~~l~~-----~~p~lvVIDSIQT~~s~~~~SapGs 191 (456)
T COG1066 122 KVLYVSGEESLQQIKLRADRLGLPTNNLYLLAE-----TNLEDIIAELEQ-----EKPDLVVIDSIQTLYSEEITSAPGS 191 (456)
T ss_pred cEEEEeCCcCHHHHHHHHHHhCCCccceEEehh-----cCHHHHHHHHHh-----cCCCEEEEeccceeecccccCCCCc
Confidence 46777744443 455556677764434444432 488999999987 46889988876554 355
Q ss_pred ccCHH----HHHHHHHHcCCEEEE------ecccccccc---cccchhhhhcCCCCccEEEECCccccCC-CCceEEEEE
Q psy14299 112 FDPLD----EIATVCEKYDLWMHV------DACWGGSLI---FSEKYSFVLKGINRANSVSWNPHKMLGA-PLQCSILLI 177 (448)
Q Consensus 112 ~~~l~----~I~~ia~~~g~~l~V------D~A~~~~~~---~~~~~~~~~~~~~~aD~~~~s~hK~l~~-P~g~G~l~v 177 (448)
+.-++ ++.++||++|+++++ ||+-++.-. ..|.. ..+.|-....+=..-.+|.=++ -...|+|-+
T Consensus 192 VsQVRe~t~~L~~~AK~~~i~~fiVGHVTKeG~IAGPrvLEHmVDtV-lyFEGd~~~~~RiLR~vKNRFG~t~EiGvFeM 270 (456)
T COG1066 192 VSQVREVAAELMRLAKTKNIAIFIVGHVTKEGAIAGPRVLEHMVDTV-LYFEGDRHSRYRILRSVKNRFGATNELGVFEM 270 (456)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEEEEcccccccCchheeeeeeEE-EEEeccCCCceeeeehhcccCCcccceeEEEE
Confidence 54454 567899999998765 444333211 11100 0011111123344455686444 466888888
Q ss_pred eccch
Q psy14299 178 KEKGL 182 (448)
Q Consensus 178 r~~~~ 182 (448)
.+..+
T Consensus 271 ~~~GL 275 (456)
T COG1066 271 TENGL 275 (456)
T ss_pred ecCCe
Confidence 77654
No 402
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=57.92 E-value=76 Score=30.49 Aligned_cols=60 Identities=12% Similarity=0.066 Sum_probs=45.3
Q ss_pred CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccc---ccCHHHHHHHHHHcCCEEEEecccc
Q psy14299 74 ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA---FDPLDEIATVCEKYDLWMHVDACWG 136 (448)
Q Consensus 74 ~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~---~~~l~~I~~ia~~~g~~l~VD~A~~ 136 (448)
....+++++...+.++....| ++.++.+.-+.+. |. ..|+..|.-+.+ .+.++++|.+|+
T Consensus 123 rG~~~t~~e~l~aaeyi~~~G-n~~viLcERG~tf-~y~r~~~D~~~ip~~k~-~~~PVi~DpSHs 185 (258)
T TIGR01362 123 KGQFLSPWDMKNVVEKVLSTG-NKNILLCERGTSF-GYNNLVVDMRSLPIMRE-LGCPVIFDATHS 185 (258)
T ss_pred CCCcCCHHHHHHHHHHHHHcC-CCcEEEEeCCCCc-CCCCcccchhhhHHHHh-cCCCEEEeCCcc
Confidence 344689999888888766655 5678888888764 64 568888876654 589999999997
No 403
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=57.71 E-value=93 Score=29.97 Aligned_cols=61 Identities=10% Similarity=0.003 Sum_probs=44.9
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcc-c---cccCHHHHHHHHHHcCCEEEEecccccc
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVL-G---AFDPLDEIATVCEKYDLWMHVDACWGGS 138 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~t-G---~~~~l~~I~~ia~~~g~~l~VD~A~~~~ 138 (448)
..++++++.+++...+.|. ..++++..+++.. + ...++..|..+.++++.++.+|..|+.|
T Consensus 142 ~~t~~e~~~Ave~i~~~Gn-~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 142 GNTIEEWLYAAEYILSSGN-GNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CCCHHHHHHHHHHHHHcCC-CcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 3489999999988766553 3344444434333 4 3578999999998889999999999877
No 404
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=57.53 E-value=82 Score=31.84 Aligned_cols=65 Identities=14% Similarity=0.011 Sum_probs=46.8
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccC-----CccccccCHHHHHHHHHHcCCEEEEecccccccc
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGT-----TVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLI 140 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~-----t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~ 140 (448)
+...+++++..+++.....|. ..++++..+. +.+-...|+..|..+.+.++.++++|.+|+.|..
T Consensus 216 G~~~t~ee~~~A~e~i~~~Gn-~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~s 285 (352)
T PRK13396 216 GMAATIDEWLMAAEYILAAGN-PNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGKS 285 (352)
T ss_pred CCCCCHHHHHHHHHHHHHcCC-CeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCcH
Confidence 334599999999987665553 4455554432 2233567899999998888999999999998754
No 405
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=56.54 E-value=32 Score=35.17 Aligned_cols=33 Identities=9% Similarity=0.140 Sum_probs=28.3
Q ss_pred EEEEeccCCccccccCHHHHHHHHHHcCCEEEEec
Q psy14299 99 FVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDA 133 (448)
Q Consensus 99 lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~ 133 (448)
+|++ ..+.-|.+.+++.+.++||++|+++.||=
T Consensus 146 ~vVL--SDY~KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 146 ALVL--SDYAKGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred EEEE--eccccccchhHHHHHHHHHHcCCcEEECC
Confidence 4444 35778999999999999999999999994
No 406
>smart00642 Aamy Alpha-amylase domain.
Probab=54.91 E-value=34 Score=30.50 Aligned_cols=28 Identities=11% Similarity=0.289 Sum_probs=24.8
Q ss_pred CccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 107 TVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 107 t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
...|..++++++++-||++|+.+++|-.
T Consensus 64 ~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 64 PRFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3568889999999999999999999963
No 407
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=54.58 E-value=41 Score=30.88 Aligned_cols=52 Identities=10% Similarity=0.043 Sum_probs=39.8
Q ss_pred HHHHHHHHHHhh-hcC-CCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEE
Q psy14299 80 CSFLEQTIQTSL-AEK-KIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHV 131 (448)
Q Consensus 80 ~e~Le~~l~~~~-~~~-~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~V 131 (448)
.+++..+++... +.. +.-.+|+++-++++.|.++|++.-+++++++|+.+|.
T Consensus 94 adAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iyt 147 (191)
T cd01455 94 VEATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQPKKLADALAREPNVNAFV 147 (191)
T ss_pred HHHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEE
Confidence 388888887653 222 2335677788998899999998889999999999864
No 408
>PLN02880 tyrosine decarboxylase
Probab=51.97 E-value=14 Score=39.18 Aligned_cols=52 Identities=19% Similarity=0.388 Sum_probs=37.0
Q ss_pred hhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHH
Q psy14299 268 NATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 319 (448)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 319 (448)
-.....|++.++.-....++..+..++|+|....+++|..|+..|.+|++++
T Consensus 330 ~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~ 381 (490)
T PLN02880 330 LSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSY 381 (490)
T ss_pred HccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHH
Confidence 3344567766443333345566677899999999999999999888776654
No 409
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=49.88 E-value=83 Score=29.10 Aligned_cols=75 Identities=9% Similarity=0.043 Sum_probs=44.5
Q ss_pred eEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHH
Q psy14299 41 LCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIAT 120 (448)
Q Consensus 41 ~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ 120 (448)
..++ .+.......+..+..|. .++....+ |.+.|.++++. .-.|++..+........--..+.+
T Consensus 25 V~~l-~R~~~~~~~~~l~~~g~---~vv~~d~~-----~~~~l~~al~g-------~d~v~~~~~~~~~~~~~~~~~li~ 88 (233)
T PF05368_consen 25 VRAL-VRDPSSDRAQQLQALGA---EVVEADYD-----DPESLVAALKG-------VDAVFSVTPPSHPSELEQQKNLID 88 (233)
T ss_dssp EEEE-ESSSHHHHHHHHHHTTT---EEEES-TT------HHHHHHHHTT-------CSEEEEESSCSCCCHHHHHHHHHH
T ss_pred cEEE-Eeccchhhhhhhhcccc---eEeecccC-----CHHHHHHHHcC-------CceEEeecCcchhhhhhhhhhHHH
Confidence 3344 44444444455555666 56555444 89999999964 234555554443445555678999
Q ss_pred HHHHcCCEEEE
Q psy14299 121 VCEKYDLWMHV 131 (448)
Q Consensus 121 ia~~~g~~l~V 131 (448)
.|++.|+..+|
T Consensus 89 Aa~~agVk~~v 99 (233)
T PF05368_consen 89 AAKAAGVKHFV 99 (233)
T ss_dssp HHHHHT-SEEE
T ss_pred hhhccccceEE
Confidence 99999987765
No 410
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=49.46 E-value=1.8e+02 Score=25.94 Aligned_cols=91 Identities=12% Similarity=0.013 Sum_probs=45.8
Q ss_pred EEEeCcHHHHH--HHHHHHHHHhcCCcccccCCCCCCCeEEEecCCC--chH---HHHHHHHhCCCCCcEEEEecCCCCC
Q psy14299 5 PFLLPGGSISN--MYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDS--HYS---MLKAAHWLGIGMDNVIRVKTNERGQ 77 (448)
Q Consensus 5 g~~t~ggT~an--~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~--H~s---~~~~~~~~g~~~~~v~~v~~~~~g~ 77 (448)
.++..||+-++ .++-..+.+. ...+|++++.. ... ..+-.+..|. ++..+.+| .
T Consensus 2 tylitGG~gglg~~la~~La~~~-------------~~~~il~~r~~~~~~~~~~~i~~l~~~g~---~v~~~~~D---v 62 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERG-------------ARRLILLGRSGAPSAEAEAAIRELESAGA---RVEYVQCD---V 62 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--------------SEEEEEESSGGGSTTHHHHHHHHHHTT----EEEEEE-----T
T ss_pred EEEEECCccHHHHHHHHHHHHcC-------------CCEEEEeccCCCccHHHHHHHHHHHhCCC---ceeeeccC---c
Confidence 46667777554 3333333321 34567888772 222 3333344455 67777765 4
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP 114 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~ 114 (448)
-|++++++++++..++..+...|+-..+....+.+.+
T Consensus 63 ~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~ 99 (181)
T PF08659_consen 63 TDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQD 99 (181)
T ss_dssp TSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC
T ss_pred cCHHHHHHHHHHHHhccCCcceeeeeeeeeccccccc
Confidence 5899999999876655545556766666666665544
No 411
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=48.46 E-value=1.5e+02 Score=28.47 Aligned_cols=62 Identities=11% Similarity=0.016 Sum_probs=44.7
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc-c---ccCHHHHHHHHHHcCCEEEEeccccccc
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG-A---FDPLDEIATVCEKYDLWMHVDACWGGSL 139 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG-~---~~~l~~I~~ia~~~g~~l~VD~A~~~~~ 139 (448)
-.++++++.+++...+.|. +.++++.-+++... . ..|+..|..+.+..+.++++|-+|+.|.
T Consensus 132 ~~t~~e~~~A~e~i~~~Gn-~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 132 MATIEEYLGALSYLQDTGK-SNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCCHHHHHHHHHHHHHcCC-CeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 6799999999987666553 34444432443333 2 5678888888888999999999998875
No 412
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=47.81 E-value=59 Score=32.21 Aligned_cols=92 Identities=16% Similarity=0.039 Sum_probs=59.2
Q ss_pred EEecCCCchHHHHHHHHhCCCCCcEEEEe----------cCC----------CCCcCHHHHHHHHHHhhhcCCCcEEEEE
Q psy14299 43 MFTSEDSHYSMLKAAHWLGIGMDNVIRVK----------TNE----------RGQMICSFLEQTIQTSLAEKKIPLFVNA 102 (448)
Q Consensus 43 Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~----------~~~----------~g~id~e~Le~~l~~~~~~~~~~~lVv~ 102 (448)
=+.+...+.-+....+-.|+.. .+++++ .+. .-.++.+++++.+++....- ..--+++
T Consensus 57 GflGg~tg~~~~~~l~~~gi~~-~fv~v~g~TRinvki~~~~~~~~Tein~~Gp~is~~~~~~~l~~~~~~l-~~~d~Vv 134 (310)
T COG1105 57 GFLGGFTGEFFVALLKDEGIPD-AFVEVKGDTRINVKILDEEDGEETEINFPGPEISEAELEQFLEQLKALL-ESDDIVV 134 (310)
T ss_pred EecCCccHHHHHHHHHhcCCCc-eEEEccCCCeeeEEEEecCCCcEEEecCCCCCCCHHHHHHHHHHHHHhc-ccCCEEE
Confidence 3455666666666666666532 122222 111 23678888888887643311 1223577
Q ss_pred eccCCccccc-cCHHHHHHHHHHcCCEEEEecccc
Q psy14299 103 TAGTTVLGAF-DPLDEIATVCEKYDLWMHVDACWG 136 (448)
Q Consensus 103 ~~~~t~tG~~-~~l~~I~~ia~~~g~~l~VD~A~~ 136 (448)
.+++-+.|.- +.+.+|.++|++.|+.+++|.+..
T Consensus 135 lsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 135 LSGSLPPGVPPDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred EeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECChH
Confidence 7788888865 558999999999999999998533
No 413
>PRK00685 metal-dependent hydrolase; Provisional
Probab=45.46 E-value=2.4e+02 Score=25.85 Aligned_cols=77 Identities=10% Similarity=-0.023 Sum_probs=47.7
Q ss_pred EEecCCCchH-HHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHH
Q psy14299 43 MFTSEDSHYS-MLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATV 121 (448)
Q Consensus 43 Vl~~~~~H~s-~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~i 121 (448)
+++++..+.. +....+..+. .+..+|......+++++..+..+.. +|+.++.+|-.+......+.+++.+.
T Consensus 138 ~~~GDt~~~~~~~~~~~~~~~---D~~~~~~~~~~h~~~~ea~~~~~~~-----~~k~~v~~H~~~~~~~~~~~~~~~~~ 209 (228)
T PRK00685 138 YHAGDTGLFSDMKLIGELHKP---DVALLPIGDNFTMGPEDAALAVELI-----KPKIVIPMHYNTFPLIEQDPEKFKAL 209 (228)
T ss_pred EEecCccchhHHHHHHHhhCC---CEEEEecCCccccCHHHHHHHHHhh-----CCCEEEEeccCCCcCCcCCHHHHHHH
Confidence 3344444432 2333333344 5666776545578888888877652 57788888877655555678888888
Q ss_pred HHHcCC
Q psy14299 122 CEKYDL 127 (448)
Q Consensus 122 a~~~g~ 127 (448)
+++.+.
T Consensus 210 ~~~~~~ 215 (228)
T PRK00685 210 VEGLGT 215 (228)
T ss_pred HHhcCC
Confidence 876443
No 414
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=45.32 E-value=1.7e+02 Score=26.06 Aligned_cols=71 Identities=13% Similarity=0.104 Sum_probs=44.1
Q ss_pred CCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHH
Q psy14299 39 PPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEI 118 (448)
Q Consensus 39 ~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I 118 (448)
++..++..............++|+ ++...+.+ +.++++..+.+..+.| ...++-.. -.
T Consensus 78 ~~Iavv~~~~~~~~~~~~~~ll~~---~i~~~~~~-----~~~e~~~~i~~~~~~G--~~viVGg~------------~~ 135 (176)
T PF06506_consen 78 PKIAVVGYPNIIPGLESIEELLGV---DIKIYPYD-----SEEEIEAAIKQAKAEG--VDVIVGGG------------VV 135 (176)
T ss_dssp SEEEEEEESS-SCCHHHHHHHHT----EEEEEEES-----SHHHHHHHHHHHHHTT----EEEESH------------HH
T ss_pred CcEEEEecccccHHHHHHHHHhCC---ceEEEEEC-----CHHHHHHHHHHHHHcC--CcEEECCH------------HH
Confidence 344444445555567888888888 67777776 7888888888766555 22333211 13
Q ss_pred HHHHHHcCCEEEE
Q psy14299 119 ATVCEKYDLWMHV 131 (448)
Q Consensus 119 ~~ia~~~g~~l~V 131 (448)
.++|+++|+..+.
T Consensus 136 ~~~A~~~gl~~v~ 148 (176)
T PF06506_consen 136 CRLARKLGLPGVL 148 (176)
T ss_dssp HHHHHHTTSEEEE
T ss_pred HHHHHHcCCcEEE
Confidence 6888888887543
No 415
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=45.23 E-value=17 Score=34.93 Aligned_cols=32 Identities=16% Similarity=0.261 Sum_probs=28.0
Q ss_pred eccCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 103 TAGTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 103 ~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
..+....|..++++++++.||++|+.+++|-.
T Consensus 42 ~~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 42 YAVDPRFGTMEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp EEESTTTBHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred eccccccchhhhhhhhhhccccccceEEEeee
Confidence 33566789999999999999999999999975
No 416
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=44.89 E-value=1.4e+02 Score=30.27 Aligned_cols=60 Identities=7% Similarity=0.016 Sum_probs=44.0
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc----cccCHHHHHHHHHHcCCEEEEecccccc
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG----AFDPLDEIATVCEKYDLWMHVDACWGGS 138 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG----~~~~l~~I~~ia~~~g~~l~VD~A~~~~ 138 (448)
.++++++.+++.....|. +.++++-.+.+... .--|+..|..+.+++++++.+|..|+.|
T Consensus 236 ~t~~e~~~Ave~i~~~Gn-~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 236 ATIEEFIYAAEYIMSQGN-GQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred CCHHHHHHHHHHHHHCCC-CCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 699999999987666553 34544443544321 2248999999999999999999999877
No 417
>PF07131 DUF1382: Protein of unknown function (DUF1382); InterPro: IPR009814 This entry is represented by Bacteriophage lambda, Xis. This entry overlaps with IPR009750, both representing lambda Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Escherichia coli and Bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown.
Probab=40.10 E-value=73 Score=23.21 Aligned_cols=29 Identities=14% Similarity=0.284 Sum_probs=24.0
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 407 FRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 407 lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
+||+++ +..+++|...|-..+.+-.+.+.
T Consensus 24 IRFVpi--Pv~~dee~~~L~s~~~~kLe~ma 52 (61)
T PF07131_consen 24 IRFVPI--PVVTDEEFHTLSSQLSQKLERMA 52 (61)
T ss_pred ceeecc--ccccHHHHHHHHHHHHHHHHHHH
Confidence 799996 89999999999988887766554
No 418
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=39.92 E-value=1.8e+02 Score=26.37 Aligned_cols=105 Identities=10% Similarity=0.019 Sum_probs=49.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++.+++|.+-..++....+.+.. + .|+..|+++..+......+.+.+.- ...+..+|.| .+-.+
T Consensus 22 ~~iWiHa~SvGE~~a~~~Li~~l~~----~----~p~~~illT~~T~tg~~~~~~~~~~-~v~~~~~P~D-----~~~~~ 87 (186)
T PF04413_consen 22 PLIWIHAASVGEVNAARPLIKRLRK----Q----RPDLRILLTTTTPTGREMARKLLPD-RVDVQYLPLD-----FPWAV 87 (186)
T ss_dssp T-EEEE-SSHHHHHHHHHHHHHHTT-----------TS-EEEEES-CCHHHHHHGG-GG-G-SEEE---S-----SHHHH
T ss_pred CcEEEEECCHHHHHHHHHHHHHHHH----h----CCCCeEEEEecCCchHHHHHHhCCC-CeEEEEeCcc-----CHHHH
Confidence 4567777776655554433333211 1 2566677776666666655554321 1257778887 67778
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEE-EEecc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWM-HVDAC 134 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l-~VD~A 134 (448)
++.++.. +|.++++.-.+- ...+...|++.|+.+ +|+|-
T Consensus 88 ~rfl~~~-----~P~~~i~~EtEl-------WPnll~~a~~~~ip~~LvNar 127 (186)
T PF04413_consen 88 RRFLDHW-----RPDLLIWVETEL-------WPNLLREAKRRGIPVVLVNAR 127 (186)
T ss_dssp HHHHHHH-------SEEEEES-----------HHHHHH-----S-EEEEEE-
T ss_pred HHHHHHh-----CCCEEEEEcccc-------CHHHHHHHhhcCCCEEEEeee
Confidence 8888764 466666654322 467889999999875 45663
No 419
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=39.56 E-value=3.6e+02 Score=26.09 Aligned_cols=103 Identities=17% Similarity=0.016 Sum_probs=59.3
Q ss_pred ccEEEeCcHHHHHHHHHH--HHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCH
Q psy14299 3 LKPFLLPGGSISNMYSIC--LARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~--~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~ 80 (448)
..-++.+|+|.++=.++. .|++ ...+|++.+....-..-..++.......+..++.|=. |+
T Consensus 6 ~~~~lITGASsGIG~~~A~~lA~~--------------g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs---~~ 68 (265)
T COG0300 6 GKTALITGASSGIGAELAKQLARR--------------GYNLILVARREDKLEALAKELEDKTGVEVEVIPADLS---DP 68 (265)
T ss_pred CcEEEEECCCchHHHHHHHHHHHC--------------CCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCC---Ch
Confidence 345677888887655443 3333 4568888888775444333433322225667776522 55
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccc--cCHHHHHHHH
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF--DPLDEIATVC 122 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~--~~l~~I~~ia 122 (448)
+++++..++..+++....+++=+++....|.+ .|++++.++.
T Consensus 69 ~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi 112 (265)
T COG0300 69 EALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMI 112 (265)
T ss_pred hHHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHH
Confidence 66666665544444455667777777777744 4455555544
No 420
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=39.17 E-value=2.6e+02 Score=27.32 Aligned_cols=61 Identities=10% Similarity=0.052 Sum_probs=44.4
Q ss_pred CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc---cccCHHHHHHHHHH-cCCEEEEecccc
Q psy14299 74 ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG---AFDPLDEIATVCEK-YDLWMHVDACWG 136 (448)
Q Consensus 74 ~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG---~~~~l~~I~~ia~~-~g~~l~VD~A~~ 136 (448)
....+.+++...+.++....| .+.++++.-+.+ .| ...|+..|..+.+. -+.++++|.+|+
T Consensus 137 rGqf~s~~e~~~aae~i~~~G-n~~vilcERG~~-fgy~~~~~D~~~ip~mk~~~t~lPVi~DpSHs 201 (281)
T PRK12457 137 KPQFMSPTQMKHVVSKCREAG-NDRVILCERGSS-FGYDNLVVDMLGFRQMKRTTGDLPVIFDVTHS 201 (281)
T ss_pred CCCcCCHHHHHHHHHHHHHcC-CCeEEEEeCCCC-CCCCCcccchHHHHHHHhhCCCCCEEEeCCcc
Confidence 344678898888888766555 567787777776 34 45677777765554 399999999997
No 421
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=38.30 E-value=2.3e+02 Score=27.36 Aligned_cols=60 Identities=8% Similarity=-0.006 Sum_probs=44.2
Q ss_pred CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHcCCEEEEecccc
Q psy14299 74 ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKYDLWMHVDACWG 136 (448)
Q Consensus 74 ~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~g~~l~VD~A~~ 136 (448)
....+++++...+.++....| ++.++.+.-+.+. |.- .|+..+.-+. +.+.++++|.+|+
T Consensus 131 rG~~~t~~e~~~aaeyi~~~G-n~~vilcERG~tf-~y~r~~~D~~~vp~~k-~~~lPVi~DpSHs 193 (264)
T PRK05198 131 KGQFLAPWDMKNVVDKVREAG-NDKIILCERGTSF-GYNNLVVDMRGLPIMR-ETGAPVIFDATHS 193 (264)
T ss_pred CCCcCCHHHHHHHHHHHHHcC-CCeEEEEeCCCCc-CCCCeeechhhhHHHh-hCCCCEEEeCCcc
Confidence 445689999988888766655 4678888888764 543 5777776444 5779999999997
No 422
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=38.26 E-value=58 Score=31.91 Aligned_cols=57 Identities=11% Similarity=0.052 Sum_probs=37.3
Q ss_pred EEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc
Q psy14299 69 RVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY 125 (448)
Q Consensus 69 ~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~ 125 (448)
.-|.+++|.+|.+.+++.++...+.|-.-.++.-+.++...=..++-+++.+.+.+.
T Consensus 14 vTPf~~dg~iD~~~l~~li~~l~~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~ 70 (296)
T TIGR03249 14 VTPFDADGSFDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVST 70 (296)
T ss_pred eCCcCCCCCcCHHHHHHHHHHHHhcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHH
Confidence 346678999999999999998777663332333344444444556666777766554
No 423
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=37.62 E-value=73 Score=31.09 Aligned_cols=63 Identities=10% Similarity=0.030 Sum_probs=37.5
Q ss_pred EEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 69 RVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 69 ~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
.-|.++++.+|.+.+++.++...+.|-.-.++.-+.++...=..++-+++.+.+.+. ++++++
T Consensus 9 vTPf~~dg~iD~~~l~~l~~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 9 VTHFDADGSFDEDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred ecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 335677899999999999988776653322222233333333445556666655553 355554
No 424
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=37.34 E-value=63 Score=31.19 Aligned_cols=55 Identities=11% Similarity=0.023 Sum_probs=35.2
Q ss_pred EEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc---cccCHHHHHHHHHHc
Q psy14299 68 IRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG---AFDPLDEIATVCEKY 125 (448)
Q Consensus 68 ~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG---~~~~l~~I~~ia~~~ 125 (448)
..-|.+++|.+|.+.+++.++...+.|-. .+ +..+++--+ ..++-+++.+.+.+.
T Consensus 5 ~~TPf~~dg~iD~~~~~~~i~~l~~~Gv~--gi-~~~GstGE~~~ls~~Er~~l~~~~~~~ 62 (281)
T cd00408 5 LVTPFTADGEVDLDALRRLVEFLIEAGVD--GL-VVLGTTGEAPTLTDEERKEVIEAVVEA 62 (281)
T ss_pred eeCCcCCCCCcCHHHHHHHHHHHHHcCCC--EE-EECCCCcccccCCHHHHHHHHHHHHHH
Confidence 34577889999999999999987766533 33 233343333 345556666665554
No 425
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=36.82 E-value=27 Score=36.87 Aligned_cols=30 Identities=13% Similarity=0.060 Sum_probs=27.1
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
..+..|..++++++++-||++|+.+++|..
T Consensus 73 id~~fGt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 73 VRTKYGTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred cCcCcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 356689999999999999999999999985
No 426
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=36.02 E-value=50 Score=32.54 Aligned_cols=55 Identities=16% Similarity=0.115 Sum_probs=41.8
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY 125 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~ 125 (448)
|.++||.+|.+.+++.++...+.|-.-..+.-+.+++++=..++-.++.+.+.+.
T Consensus 15 PF~~dg~vD~~a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~ 69 (299)
T COG0329 15 PFDEDGSVDEEALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEA 69 (299)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHH
Confidence 5566799999999999998777764444455566666666778888888888875
No 427
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=35.67 E-value=66 Score=31.14 Aligned_cols=58 Identities=14% Similarity=0.122 Sum_probs=37.5
Q ss_pred EEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc
Q psy14299 68 IRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY 125 (448)
Q Consensus 68 ~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~ 125 (448)
..-|.++++.+|.+.+++.++...+.|-.-.++.-+.++...=..+.-+++.+++.++
T Consensus 8 ~~TPf~~dg~iD~~~~~~~i~~l~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 8 LVTPFKDDGSVDFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred eeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHH
Confidence 3446678999999999999998777664332333333333333556667777766665
No 428
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=35.47 E-value=49 Score=28.06 Aligned_cols=82 Identities=12% Similarity=0.150 Sum_probs=41.7
Q ss_pred EEecCCCchHHHHHHHHhCCCCCcEEEEecCCC---CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHH
Q psy14299 43 MFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER---GQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIA 119 (448)
Q Consensus 43 Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~---g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~ 119 (448)
|..++...+...-+.-+......++..+-..+- ..++.+.-.+.+++-... .+.+++++.+. .|-+++.
T Consensus 27 I~~~~i~Rpgl~L~G~~~~~~~~RIQiiG~~E~~yl~~l~~~~r~~~l~~l~~~--~~P~iIvt~~~------~~p~~l~ 98 (127)
T PF02603_consen 27 ITSPDINRPGLELAGFFNYFHPNRIQIIGNTESAYLNSLDEEERKERLEKLFSY--NPPCIIVTRGL------EPPPELI 98 (127)
T ss_dssp E-ECCEEE-HHHHTTS-TTTTTCSEEEE-HHHHHHHCCS-HHHHCCHHHHHCTT--T-S-EEEETTT---------HHHH
T ss_pred eeccccCCccHhhcCccccCCCCeEEEEcHHHHHHHHHCCHHHHHHHHHHHhCC--CCCEEEEECcC------CCCHHHH
Confidence 444444433333333222233334544443221 367888887777765442 46688887665 6889999
Q ss_pred HHHHHcCCEEEEe
Q psy14299 120 TVCEKYDLWMHVD 132 (448)
Q Consensus 120 ~ia~~~g~~l~VD 132 (448)
++|++++++++.=
T Consensus 99 e~a~~~~ipll~t 111 (127)
T PF02603_consen 99 ELAEKYNIPLLRT 111 (127)
T ss_dssp HHHHHCT--EEEE
T ss_pred HHHHHhCCcEEEc
Confidence 9999999998753
No 429
>cd01991 Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase .
Probab=34.96 E-value=2e+02 Score=27.23 Aligned_cols=104 Identities=15% Similarity=0.071 Sum_probs=56.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCC---chHHHHHHHHhCCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDS---HYSMLKAAHWLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~---H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~ 80 (448)
-|++.|||-.|-.++..+++.... .+ .-..+-.+... .....+.++.+|+ +...+.. +.
T Consensus 18 v~~~LSGGlDSs~va~~~~~~~~~------~~---~~~~~~~~~~~~~e~~~a~~~a~~l~~---~~~~~~~------~~ 79 (269)
T cd01991 18 VGVLLSGGLDSSLVAALAARLLPE------PV---KTFSIGFGFEGSDEREYARRVAEHLGT---EHHEVEF------TP 79 (269)
T ss_pred eEEeecccHHHHHHHHHHHHhhCC------CC---ceEEEeeCCCCCChHHHHHHHHHHhCC---cceEEEc------CH
Confidence 478999999998777666544210 00 11122222211 2234566677777 4555553 44
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
+++.+.+.+..... ..........++..+++.++++++.++++|-
T Consensus 80 ~~~~~~~~~~~~~~---------~~p~~~~~~~~~~~l~~~a~~~~~~v~l~G~ 124 (269)
T cd01991 80 ADLLAALPDVIWEL---------DEPFADSSAIPLYLLSRLARKHGIKVVLSGE 124 (269)
T ss_pred HHHHHHHHHHHHHh---------CCCCCCcHHHHHHHHHHHHHHhCCEEEEecC
Confidence 55555443310000 0111122335678899999999989998874
No 430
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=34.46 E-value=5.1e+02 Score=26.34 Aligned_cols=82 Identities=16% Similarity=0.194 Sum_probs=47.2
Q ss_pred CeEEEecCCCchH-HHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcc--------c
Q psy14299 40 PLCMFTSEDSHYS-MLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVL--------G 110 (448)
Q Consensus 40 ~~~Vl~~~~~H~s-~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~t--------G 110 (448)
+.++|++..+... +..-++.+|....++..++ ..+++.+.+.+++ .+|.+|++....+.. |
T Consensus 111 ~~VlYvs~EEs~~qi~~Ra~rlg~~~~~l~l~~-----e~~le~I~~~i~~-----~~~~lVVIDSIq~l~~~~~~~~~g 180 (372)
T cd01121 111 GKVLYVSGEESPEQIKLRADRLGISTENLYLLA-----ETNLEDILASIEE-----LKPDLVIIDSIQTVYSSELTSAPG 180 (372)
T ss_pred CeEEEEECCcCHHHHHHHHHHcCCCcccEEEEc-----cCcHHHHHHHHHh-----cCCcEEEEcchHHhhccccccCCC
Confidence 3466766444333 3333445565333343332 2367888887754 357899998876542 2
Q ss_pred cccC----HHHHHHHHHHcCCEEEE
Q psy14299 111 AFDP----LDEIATVCEKYDLWMHV 131 (448)
Q Consensus 111 ~~~~----l~~I~~ia~~~g~~l~V 131 (448)
.... +.++.++++++|+.+++
T Consensus 181 ~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 181 SVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 2222 34577899999987654
No 431
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=34.26 E-value=74 Score=31.30 Aligned_cols=63 Identities=8% Similarity=0.010 Sum_probs=37.4
Q ss_pred EEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 69 RVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 69 ~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
.-|.+++|.+|.+.+++.++...+.|-.-.++.-+.++..+=..++-.++.+.+.+. .+++++
T Consensus 16 vTPf~~dg~iD~~~l~~li~~l~~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 81 (303)
T PRK03620 16 VTPFDADGSFDEAAYREHLEWLAPYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIA 81 (303)
T ss_pred eCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 335677899999999999998766653322222233333333445556666655543 355554
No 432
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=33.92 E-value=5e+02 Score=26.00 Aligned_cols=104 Identities=13% Similarity=0.064 Sum_probs=55.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCC-----CchHHHHHHHHhCCCCCcEEEEecCCCCCc
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSED-----SHYSMLKAAHWLGIGMDNVIRVKTNERGQM 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~-----~H~s~~~~~~~~g~~~~~v~~v~~~~~g~i 78 (448)
.++-.|||-.|-.++..+.... |+ ....|-++.. +...+.+.++.+|+ ....+.+
T Consensus 62 ~iV~lSGGkDSs~la~ll~~~~--------gl---~~l~vt~~~~~~~e~~~~n~~~~~~~lgv---d~~~i~~------ 121 (343)
T TIGR03573 62 CIIGVSGGKDSTYQAHVLKKKL--------GL---NPLLVTVDPGWNTELGVKNLNNLIKKLGF---DLHTITI------ 121 (343)
T ss_pred EEEECCCCHHHHHHHHHHHHHh--------CC---ceEEEEECCCCCCHHHHHHHHHHHHHcCC---CeEEEeC------
Confidence 3677899999976664443321 21 1111222211 11134555666777 5666654
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccc
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWG 136 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~ 136 (448)
|++.+.............| .. .........+.++|+++|+.+++.|..+
T Consensus 122 d~~~~~~l~~~~~~~~~~p--------c~-~c~~~~~~~l~~~A~~~gi~~Il~G~~~ 170 (343)
T TIGR03573 122 NPETFRKLQRAYFKKVGDP--------EW-PQDHAIFASVYQVALKFNIPLIIWGENI 170 (343)
T ss_pred CHHHHHHHHHHHHhccCCC--------ch-hhhhHHHHHHHHHHHHhCCCEEEeCCCH
Confidence 4555555554422111111 11 1223345778899999999999998544
No 433
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=33.79 E-value=82 Score=30.85 Aligned_cols=57 Identities=11% Similarity=0.071 Sum_probs=34.9
Q ss_pred EEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHH
Q psy14299 68 IRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEK 124 (448)
Q Consensus 68 ~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~ 124 (448)
..-|.+++|.+|.+.+++.++...+.|-.-.++.-+.++...=..++-.++.+.+.+
T Consensus 8 ~~TPf~~dg~iD~~~l~~lv~~~~~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~~ 64 (294)
T TIGR02313 8 LITPFKRNGDIDEEALRELIEFQIEGGSHAISVGGTSGEPGSLTLEERKQAIENAID 64 (294)
T ss_pred eeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHH
Confidence 344677899999999999999877665332222233333333344555566665543
No 434
>PLN03033 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=33.39 E-value=2.9e+02 Score=27.06 Aligned_cols=60 Identities=10% Similarity=0.008 Sum_probs=45.8
Q ss_pred CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccc---ccCHHHHHHHHHHcCCEEEEecccc
Q psy14299 74 ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA---FDPLDEIATVCEKYDLWMHVDACWG 136 (448)
Q Consensus 74 ~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~---~~~l~~I~~ia~~~g~~l~VD~A~~ 136 (448)
....+++++...+.++....| ++.++++.-+.+. |. +.|+..+.-+. +.+.++++|.+|+
T Consensus 137 kGq~~t~~e~~~aaeki~~~G-N~~viLcERG~tF-gy~~lv~D~r~ip~mk-~~~lPVI~DpSHs 199 (290)
T PLN03033 137 KGQFCAPSVMRNSAEKVRLAG-NPNVMVCERGTMF-GYNDLIVDPRNLEWMR-EANCPVVADITHS 199 (290)
T ss_pred CCCCCCHHHHHHHHHHHHHcC-CCcEEEEeCCCCc-CCCCcccchhhhHHHH-hcCCCEEEeCCcc
Confidence 455789999999988766655 5678888878754 53 36777777664 6899999999997
No 435
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=33.03 E-value=35 Score=37.16 Aligned_cols=36 Identities=11% Similarity=0.065 Sum_probs=30.8
Q ss_pred EEeccCCccccccCHHHHHHHHHHcCCEEEEecccc
Q psy14299 101 NATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWG 136 (448)
Q Consensus 101 v~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~ 136 (448)
-.=++++..|.-++++++.+-||++||-+++|-.++
T Consensus 202 g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~ 237 (628)
T COG0296 202 GYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPN 237 (628)
T ss_pred eeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 444567778999999999999999999999998644
No 436
>PLN02417 dihydrodipicolinate synthase
Probab=32.39 E-value=85 Score=30.47 Aligned_cols=63 Identities=11% Similarity=0.067 Sum_probs=38.5
Q ss_pred EEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 69 RVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 69 ~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
.-|.+++|.+|.+.+++.++...+.|-.-.++.-+.++..+=..+.-+++.+.+.+. .+++++
T Consensus 10 ~TPf~~~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~~~~~~~pvi~ 75 (280)
T PLN02417 10 KTPYLPDGRFDLEAYDSLVNMQIENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGKIKVIG 75 (280)
T ss_pred eCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccCcchhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 346678899999999999998766653322333333444444455556666655543 355553
No 437
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=31.98 E-value=1.4e+02 Score=21.19 Aligned_cols=52 Identities=17% Similarity=0.325 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCC
Q psy14299 323 AVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGG 389 (448)
Q Consensus 323 ~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g 389 (448)
+..+++.+.+.|+++||++-+......+.+.+.+.++... ..++.+.+.+.|
T Consensus 9 C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~---------------~~~i~~~i~~~G 60 (62)
T PF00403_consen 9 CEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTS---------------IEKIIEAIEKAG 60 (62)
T ss_dssp SHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSC---------------HHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCC---------------HHHHHHHHHHhC
Confidence 4567888999999999986442234456677766543321 136777777766
No 438
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=31.54 E-value=86 Score=30.64 Aligned_cols=57 Identities=21% Similarity=0.238 Sum_probs=33.1
Q ss_pred EEecCCCCCcCHHHHHHHHHHhhhcC-CCcEEEEEeccCCccccccCHHHHHHHHHHc
Q psy14299 69 RVKTNERGQMICSFLEQTIQTSLAEK-KIPLFVNATAGTTVLGAFDPLDEIATVCEKY 125 (448)
Q Consensus 69 ~v~~~~~g~id~e~Le~~l~~~~~~~-~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~ 125 (448)
.-|.+++|.+|.+.+++.++...+.| -.-.++.-+.++...=....-+++.+.+.+.
T Consensus 9 ~TPf~~dg~iD~~~~~~~i~~~i~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~~~ 66 (290)
T TIGR00683 9 LVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDE 66 (290)
T ss_pred ecCCCCCCCcCHHHHHHHHHHHHhCCCcCEEEECCcccccccCCHHHHHHHHHHHHHH
Confidence 34667899999999999998866654 2222222222333222344455566655543
No 439
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=31.50 E-value=2.9e+02 Score=29.21 Aligned_cols=62 Identities=15% Similarity=0.055 Sum_probs=44.3
Q ss_pred cEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc--CCEEEEecccc
Q psy14299 66 NVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY--DLWMHVDACWG 136 (448)
Q Consensus 66 ~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~--g~~l~VD~A~~ 136 (448)
+|..+... ...++.+++.+.+.+ .+|.+|.++.. +.......++++.+|+. ++.+++=|.|.
T Consensus 39 ~V~iiD~~-~~~~~~~~~~~~l~~-----~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~ 102 (497)
T TIGR02026 39 DVTFLDAM-TGPLTDEKLVERLRA-----HCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHP 102 (497)
T ss_pred ceEEeccc-ccCCCHHHHHHHHHh-----cCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCc
Confidence 56666542 346778888888866 25778888643 44566678899999987 89998887765
No 440
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=30.95 E-value=61 Score=31.49 Aligned_cols=62 Identities=13% Similarity=0.022 Sum_probs=36.4
Q ss_pred EecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 70 VKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 70 v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
-|.+++|.+|.+.+++.++...+.|-.-.++..+.++...=..+.-.+|.+++.++ ++++++
T Consensus 11 TPf~~dg~id~~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~ 75 (289)
T PF00701_consen 11 TPFNADGSIDEDALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIA 75 (289)
T ss_dssp --BETTSSB-HHHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEe
Confidence 35667899999999999998776663322222233333333445566677776653 466655
No 441
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=30.93 E-value=46 Score=31.86 Aligned_cols=29 Identities=14% Similarity=0.109 Sum_probs=18.6
Q ss_pred cccccCHHHHHHHHHHcCCEEEEeccccc
Q psy14299 109 LGAFDPLDEIATVCEKYDLWMHVDACWGG 137 (448)
Q Consensus 109 tG~~~~l~~I~~ia~~~g~~l~VD~A~~~ 137 (448)
.|.+.+.+++.++++++++-++||++|-.
T Consensus 49 ~G~lg~~~~l~~~l~~~~i~~vIDATHPf 77 (249)
T PF02571_consen 49 VGRLGDEEGLAEFLRENGIDAVIDATHPF 77 (249)
T ss_pred ECCCCCHHHHHHHHHhCCCcEEEECCCch
Confidence 34444666667777777777777776654
No 442
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=30.89 E-value=1.2e+02 Score=28.02 Aligned_cols=64 Identities=14% Similarity=0.130 Sum_probs=41.9
Q ss_pred cEEEEecCCCCCc-CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEE
Q psy14299 66 NVIRVKTNERGQM-ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMH 130 (448)
Q Consensus 66 ~v~~v~~~~~g~i-d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~ 130 (448)
++.++...++|.+ -.-+-|..++-..-.|..|..|++...+- .|.....+++.+++++||+.++
T Consensus 125 HVfpL~A~~ggVl~R~GHTEasVdLarlAGl~Pa~VicEi~~~-dG~mar~~~~~~fa~~h~l~~i 189 (203)
T COG0108 125 HVFPLRAKDGGVLERRGHTEAAVDLARLAGLKPAGVICEIMND-DGTMARLPELEEFAKEHGLPVI 189 (203)
T ss_pred CeeeeeeccCCeeccCChHHHHHHHHHHcCCCCcEEEEEEeCC-CccccChHHHHHHHHHcCCcEE
Confidence 4555554444422 22333444443334567786666666554 9999999999999999999875
No 443
>PRK09354 recA recombinase A; Provisional
Probab=30.68 E-value=5.8e+02 Score=25.79 Aligned_cols=86 Identities=12% Similarity=0.074 Sum_probs=49.6
Q ss_pred CCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc------cc
Q psy14299 39 PPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG------AF 112 (448)
Q Consensus 39 ~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG------~~ 112 (448)
.+.++|++ .+|..-..-++.+|+...++....++ +.++....++...+. ..+.+|++...+...- ..
T Consensus 88 G~~~~yId-~E~s~~~~~a~~lGvdld~lli~qp~-----~~Eq~l~i~~~li~s-~~~~lIVIDSvaaL~~~~E~eg~~ 160 (349)
T PRK09354 88 GGTAAFID-AEHALDPVYAKKLGVDIDNLLVSQPD-----TGEQALEIADTLVRS-GAVDLIVVDSVAALVPKAEIEGEM 160 (349)
T ss_pred CCcEEEEC-CccchHHHHHHHcCCCHHHeEEecCC-----CHHHHHHHHHHHhhc-CCCCEEEEeChhhhcchhhhcCCc
Confidence 34567777 45544456667778866566655443 234444444333222 3577888877664431 11
Q ss_pred --------c-----CHHHHHHHHHHcCCEEEE
Q psy14299 113 --------D-----PLDEIATVCEKYDLWMHV 131 (448)
Q Consensus 113 --------~-----~l~~I~~ia~~~g~~l~V 131 (448)
. -+..|..+++++|+.+++
T Consensus 161 gd~~~~~qar~ms~~Lr~L~~~l~k~~itvI~ 192 (349)
T PRK09354 161 GDSHVGLQARLMSQALRKLTGNISKSNTTVIF 192 (349)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHcCcEEEE
Confidence 0 156677888999987654
No 444
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=30.42 E-value=70 Score=31.17 Aligned_cols=58 Identities=16% Similarity=0.143 Sum_probs=36.0
Q ss_pred EEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc
Q psy14299 68 IRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY 125 (448)
Q Consensus 68 ~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~ 125 (448)
..-|.++++.+|.+.+++.++...+.|-.-.++.-+.++...=..+.-.++.+.+.++
T Consensus 9 ~~TPf~~dg~iD~~~l~~~i~~l~~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~~ 66 (292)
T PRK03170 9 LVTPFKEDGSVDFAALRKLVDYLIANGTDGLVVVGTTGESPTLTHEEHEELIRAVVEA 66 (292)
T ss_pred eeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECCcCCccccCCHHHHHHHHHHHHHH
Confidence 3446678999999999999998777664432333333333333445556666655553
No 445
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=29.98 E-value=71 Score=31.21 Aligned_cols=57 Identities=14% Similarity=0.184 Sum_probs=35.8
Q ss_pred EEecCCCCCcCHHHHHHHHHHhhh-cCCCcEEEEEeccCCccccccCHHHHHHHHHHc
Q psy14299 69 RVKTNERGQMICSFLEQTIQTSLA-EKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY 125 (448)
Q Consensus 69 ~v~~~~~g~id~e~Le~~l~~~~~-~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~ 125 (448)
.-|.+++|.+|.+.+++.++...+ .|-.-.++.-+.++...=..+.-.++.+.+.++
T Consensus 12 ~TPf~~dg~iD~~~~~~li~~l~~~~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~ 69 (293)
T PRK04147 12 LTPFDEDGQIDEQGLRRLVRFNIEKQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEE 69 (293)
T ss_pred ECcCCCCCCcCHHHHHHHHHHHHhcCCCCEEEECCCccccccCCHHHHHHHHHHHHHH
Confidence 345678999999999999998776 663333333333333333445556666666553
No 446
>CHL00073 chlN photochlorophyllide reductase subunit N
Probab=29.93 E-value=1e+02 Score=32.40 Aligned_cols=52 Identities=10% Similarity=-0.008 Sum_probs=36.2
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc-cCHHHHHHHH-HHcCCEEEEe
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF-DPLDEIATVC-EKYDLWMHVD 132 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~-~~l~~I~~ia-~~~g~~l~VD 132 (448)
+-+.|++.+.+-.++. .|+++++... -++|.+ +||+.+++-+ +++|++++.=
T Consensus 81 ~~~~L~~~i~ei~~~~-~p~~ifv~~T-C~t~iIGdDle~va~~~~~~~gipVV~v 134 (457)
T CHL00073 81 DYEELKRLCLQIKKDR-NPSVIVWIGT-CTTEIIKMDLEGMAPKLEAEIGIPIVVA 134 (457)
T ss_pred CHHHHHHHHHHHHHhC-CCCEEEEEcc-CcHHhhccCHHHHHHHHHHhhCCCEEEE
Confidence 5678888888766654 4655555443 347766 9999998755 4789987753
No 447
>cd00983 recA RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange.
Probab=29.81 E-value=3.8e+02 Score=26.81 Aligned_cols=85 Identities=11% Similarity=0.087 Sum_probs=47.0
Q ss_pred CeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc------cc-
Q psy14299 40 PLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG------AF- 112 (448)
Q Consensus 40 ~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG------~~- 112 (448)
+.++|++ .+|..-...++.+|+...++....++ +.+++...++...+. ..+.+|++.+.+.... ..
T Consensus 84 ~~~vyId-~E~~~~~~~a~~lGvd~~~l~v~~p~-----~~eq~l~i~~~li~s-~~~~lIVIDSvaal~~~~E~~~~~~ 156 (325)
T cd00983 84 GTVAFID-AEHALDPVYAKKLGVDLDNLLISQPD-----TGEQALEIADSLVRS-GAVDLIVVDSVAALVPKAEIEGEMG 156 (325)
T ss_pred CCEEEEC-ccccHHHHHHHHcCCCHHHheecCCC-----CHHHHHHHHHHHHhc-cCCCEEEEcchHhhccccccccccc
Confidence 4567777 55655455666777765555554443 344444444433222 3567888877554331 11
Q ss_pred ------------cCHHHHHHHHHHcCCEEEE
Q psy14299 113 ------------DPLDEIATVCEKYDLWMHV 131 (448)
Q Consensus 113 ------------~~l~~I~~ia~~~g~~l~V 131 (448)
.-+..|..+++++++.+++
T Consensus 157 ~~~~~~qaR~l~~~Lr~L~~~~~k~~~~vI~ 187 (325)
T cd00983 157 DSHVGLQARLMSQALRKLTGSINKSNTTVIF 187 (325)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 1234466677888887654
No 448
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=29.75 E-value=1.7e+02 Score=27.16 Aligned_cols=55 Identities=5% Similarity=-0.045 Sum_probs=34.4
Q ss_pred CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccc---ccC-------HHHHHHHHHHcCCEEEE
Q psy14299 76 GQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA---FDP-------LDEIATVCEKYDLWMHV 131 (448)
Q Consensus 76 g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~---~~~-------l~~I~~ia~~~g~~l~V 131 (448)
+.+++++|+..++...... .+.+|++.+.+..... .++ +..|.++|+++|+.+++
T Consensus 104 ~~~~~~~l~~~i~~~~~~~-~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 104 SSLTVSDIRSRARRLKKEH-GLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCCHHHHHHHHHHHHHhc-CCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 4567888888877644333 5678888776544211 111 45666788888887665
No 449
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=29.67 E-value=1.1e+02 Score=29.82 Aligned_cols=58 Identities=14% Similarity=0.153 Sum_probs=36.2
Q ss_pred EEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc
Q psy14299 68 IRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY 125 (448)
Q Consensus 68 ~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~ 125 (448)
..-|.+++|.+|.+.+++.++...+.|-.-.++.-+.++...=..+.-+++.+.+.+.
T Consensus 6 ~~TPf~~~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~ 63 (285)
T TIGR00674 6 LITPFKEDGSVDFAALEKLIDFQIENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDL 63 (285)
T ss_pred eeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHH
Confidence 3457778999999999999988766653332222233333333445556666665553
No 450
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=29.59 E-value=3.9e+02 Score=27.66 Aligned_cols=104 Identities=10% Similarity=0.059 Sum_probs=66.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.+++.+++|-+-..++....+++..+ .|+..++++..+--+...+.+.++-. ..+.++|.| .+-.+
T Consensus 50 p~vWiHaaSVGEv~a~~pLv~~l~~~--------~P~~~ilvTt~T~Tg~e~a~~~~~~~-v~h~YlP~D-----~~~~v 115 (419)
T COG1519 50 PLVWIHAASVGEVLAALPLVRALRER--------FPDLRILVTTMTPTGAERAAALFGDS-VIHQYLPLD-----LPIAV 115 (419)
T ss_pred CeEEEEecchhHHHHHHHHHHHHHHh--------CCCCCEEEEecCccHHHHHHHHcCCC-eEEEecCcC-----chHHH
Confidence 46777777766444433322221100 26666777777777888888877743 367888988 77788
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEE-Eec
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMH-VDA 133 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~-VD~ 133 (448)
.+.++. .+|+++++.-.+- ..-+..-|+++|++++ |.|
T Consensus 116 ~rFl~~-----~~P~l~Ii~EtEl-------WPnli~e~~~~~~p~~LvNa 154 (419)
T COG1519 116 RRFLRK-----WRPKLLIIMETEL-------WPNLINELKRRGIPLVLVNA 154 (419)
T ss_pred HHHHHh-----cCCCEEEEEeccc-------cHHHHHHHHHcCCCEEEEee
Confidence 888876 3677777654332 3456777888998755 454
No 451
>TIGR00416 sms DNA repair protein RadA. The gene protuct codes for a probable ATP-dependent protease involved in both DNA repair and degradation of proteins, peptides, glycopeptides. Also known as sms. Residues 11-28 of the SEED alignment contain a putative Zn binding domain. Residues 110-117 of the seed contain a putative ATP binding site both documented in Haemophilus and in Listeria monocytogenes. for E.coli see ( J. BACTERIOL. 178:5045-5048(1996)).
Probab=29.30 E-value=4.4e+02 Score=27.65 Aligned_cols=82 Identities=12% Similarity=0.168 Sum_probs=46.4
Q ss_pred CeEEEecCCCchH-HHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcc--------c
Q psy14299 40 PLCMFTSEDSHYS-MLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVL--------G 110 (448)
Q Consensus 40 ~~~Vl~~~~~H~s-~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~t--------G 110 (448)
+.++|++-.+... +..-+..+|+...++..+. ..+++.+.+.+++ .++.+|++.+.++.. |
T Consensus 123 ~kvlYvs~EEs~~qi~~ra~rlg~~~~~l~~~~-----e~~~~~I~~~i~~-----~~~~~vVIDSIq~l~~~~~~~~~g 192 (454)
T TIGR00416 123 MKVLYVSGEESLQQIKMRAIRLGLPEPNLYVLS-----ETNWEQICANIEE-----ENPQACVIDSIQTLYSPDISSAPG 192 (454)
T ss_pred CcEEEEECcCCHHHHHHHHHHcCCChHHeEEcC-----CCCHHHHHHHHHh-----cCCcEEEEecchhhcccccccCCC
Confidence 3467777544433 2222344455333333322 2367888888765 357789998876642 2
Q ss_pred cccCH----HHHHHHHHHcCCEEEE
Q psy14299 111 AFDPL----DEIATVCEKYDLWMHV 131 (448)
Q Consensus 111 ~~~~l----~~I~~ia~~~g~~l~V 131 (448)
....+ .++.+++|++|+.+++
T Consensus 193 ~~~q~r~~~~~L~~~ak~~giTvll 217 (454)
T TIGR00416 193 SVSQVRECTAELMRLAKTRGIAIFI 217 (454)
T ss_pred CHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 22223 3477889999986544
No 452
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=29.24 E-value=54 Score=31.37 Aligned_cols=31 Identities=16% Similarity=0.205 Sum_probs=22.7
Q ss_pred cccccCHHHHHHHHHHcCCEEEEeccccccc
Q psy14299 109 LGAFDPLDEIATVCEKYDLWMHVDACWGGSL 139 (448)
Q Consensus 109 tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~ 139 (448)
.|.+.+-+++.++++++++-++||++|-...
T Consensus 48 ~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~ 78 (248)
T PRK08057 48 VGGFGGAEGLAAYLREEGIDLVIDATHPYAA 78 (248)
T ss_pred ECCCCCHHHHHHHHHHCCCCEEEECCCccHH
Confidence 4555577788888888888888888776543
No 453
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=29.20 E-value=42 Score=36.08 Aligned_cols=30 Identities=17% Similarity=0.280 Sum_probs=25.7
Q ss_pred CCccccccCHHHHHHHHHHcCCEEEEeccc
Q psy14299 106 TTVLGAFDPLDEIATVCEKYDLWMHVDACW 135 (448)
Q Consensus 106 ~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~ 135 (448)
+...|..++++++++.||++|+.+++|..+
T Consensus 153 ~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~ 182 (542)
T TIGR02402 153 HNAYGGPDDLKALVDAAHGLGLGVILDVVY 182 (542)
T ss_pred ccccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 445677788999999999999999999854
No 454
>PF04748 Polysacc_deac_2: Divergent polysaccharide deacetylase; InterPro: IPR006837 This is a family of uncharacterised proteins that includes YibQ.; PDB: 2QV5_A 2NLY_A.
Probab=29.03 E-value=3.5e+02 Score=25.15 Aligned_cols=89 Identities=15% Similarity=0.157 Sum_probs=54.1
Q ss_pred EEEecCCCch-HHHHHHHHhCCCCCcEEEEecCCCC-----------CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcc
Q psy14299 42 CMFTSEDSHY-SMLKAAHWLGIGMDNVIRVKTNERG-----------QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVL 109 (448)
Q Consensus 42 ~Vl~~~~~H~-s~~~~~~~~g~~~~~v~~v~~~~~g-----------~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~t 109 (448)
..+.|...|. .+.+.++..|.. -+..+|..+.+ .++.+++++.++...++-+....|.=-.++-.|
T Consensus 25 ~ai~P~~~~~~~~a~~a~~~G~E--vllhlPMep~~~~~~gp~~L~~~~~~~~i~~~l~~al~~vp~a~GvnNhmGS~~T 102 (213)
T PF04748_consen 25 FAILPYAPYSREWAERARAAGHE--VLLHLPMEPKGYKDPGPGALLTGMSEEEIRKRLEAALARVPGAVGVNNHMGSRFT 102 (213)
T ss_dssp EEEETTSTTHHHHHHHHHHCT-E--EEEEEEE--TTTT---TT-B-TTS-HHHHHHHHHHHHCCSTT-SEEEEEE-CCHH
T ss_pred EEECCCCCChHHHHHHHHHcCCE--EEEeCCCCCCCCCCcccccccCCCCHHHHHHHHHHHHHHCCCcEEEecCCCcccc
Confidence 4555666665 355666666652 45566644322 489999999999877665444444444566667
Q ss_pred ccccCHHHHHHHHHHcCCEEEEec
Q psy14299 110 GAFDPLDEIATVCEKYDLWMHVDA 133 (448)
Q Consensus 110 G~~~~l~~I~~ia~~~g~~l~VD~ 133 (448)
.....++.+.+.++++|.++ ||.
T Consensus 103 ~~~~~m~~vl~~l~~~gl~F-vDS 125 (213)
T PF04748_consen 103 SDREAMRWVLEVLKERGLFF-VDS 125 (213)
T ss_dssp C-HHHHHHHHHHHHHTT-EE-EE-
T ss_pred CCHHHHHHHHHHHHHcCCEE-EeC
Confidence 77788999999999998766 443
No 455
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=28.14 E-value=3.2e+02 Score=22.04 Aligned_cols=68 Identities=12% Similarity=0.070 Sum_probs=44.4
Q ss_pred HHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc--CCEEEEe
Q psy14299 55 KAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY--DLWMHVD 132 (448)
Q Consensus 55 ~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~--g~~l~VD 132 (448)
..++..|. ++..+..+ .+.+++.+.+.+. +|.+|.++.. .+.......++++..|+. ++.+++=
T Consensus 22 ~~l~~~G~---~v~~~d~~----~~~~~l~~~~~~~-----~pd~V~iS~~--~~~~~~~~~~l~~~~k~~~p~~~iv~G 87 (121)
T PF02310_consen 22 AYLRKAGH---EVDILDAN----VPPEELVEALRAE-----RPDVVGISVS--MTPNLPEAKRLARAIKERNPNIPIVVG 87 (121)
T ss_dssp HHHHHTTB---EEEEEESS----B-HHHHHHHHHHT-----TCSEEEEEES--SSTHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred HHHHHCCC---eEEEECCC----CCHHHHHHHHhcC-----CCcEEEEEcc--CcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 34444455 67766543 4568888888762 5677777553 344566778888888877 7888877
Q ss_pred cccc
Q psy14299 133 ACWG 136 (448)
Q Consensus 133 ~A~~ 136 (448)
|.+.
T Consensus 88 G~~~ 91 (121)
T PF02310_consen 88 GPHA 91 (121)
T ss_dssp ESSS
T ss_pred CCch
Confidence 7554
No 456
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=28.12 E-value=1.2e+02 Score=29.61 Aligned_cols=63 Identities=16% Similarity=0.221 Sum_probs=37.1
Q ss_pred EEecCCCCCcCHHHHHHHHHHhhhc-CCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 69 RVKTNERGQMICSFLEQTIQTSLAE-KKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 69 ~v~~~~~g~id~e~Le~~l~~~~~~-~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
.-|.+++|.+|.+.+++.++...+. |-.-.++.-+.++...=..+.-+++.+.+.+. .+.+++
T Consensus 9 ~TPf~~dg~iD~~~~~~~i~~l~~~~Gv~gi~~~GstGE~~~Lt~~Er~~~~~~~~~~~~~~~~via 75 (288)
T cd00954 9 LTPFDENGEINEDVLRAIVDYLIEKQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEAAKGKVTLIA 75 (288)
T ss_pred ECCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 4466789999999999999987666 53322222233333222344455566655543 355554
No 457
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=28.05 E-value=80 Score=31.99 Aligned_cols=58 Identities=9% Similarity=-0.008 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCc-cccccCHHHHHHHHHHcCCEEEEecccc
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTV-LGAFDPLDEIATVCEKYDLWMHVDACWG 136 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~-tG~~~~l~~I~~ia~~~g~~l~VD~A~~ 136 (448)
+.++.++.|++..+.|.+.....+-.+... .-....+++|.+.|+++|+.+++|-...
T Consensus 12 ~~~~~~~yi~~a~~~Gf~~iFTSL~ipe~~~~~~~~~~~~l~~~a~~~~~~v~~Disp~ 70 (357)
T PF05913_consen 12 SFEENKAYIEKAAKYGFKRIFTSLHIPEDDPEDYLERLKELLKLAKELGMEVIADISPK 70 (357)
T ss_dssp -HHHHHHHHHHHHCTTEEEEEEEE---------HHHHHHHHHHHHHHCT-EEEEEE-CC
T ss_pred CHHHHHHHHHHHHHCCCCEEECCCCcCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 678888888887666644333333333322 3456789999999999999999997544
No 458
>PF13607 Succ_CoA_lig: Succinyl-CoA ligase like flavodoxin domain; PDB: 2CSU_A.
Probab=27.98 E-value=3.9e+02 Score=22.96 Aligned_cols=111 Identities=11% Similarity=0.070 Sum_probs=56.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC-CcEEEEecCCCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM-DNVIRVKTNERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~-~~v~~v~~~~~g~id~e~ 82 (448)
-++++.+|..+..+.-++... |+. -...|=++.....+..+...++.-.. .+++.+-.+ +--|++.
T Consensus 4 valisQSG~~~~~~~~~~~~~---------g~g--~s~~vs~Gn~~dv~~~d~l~~~~~D~~t~~I~ly~E--~~~d~~~ 70 (138)
T PF13607_consen 4 VALISQSGALGTAILDWAQDR---------GIG--FSYVVSVGNEADVDFADLLEYLAEDPDTRVIVLYLE--GIGDGRR 70 (138)
T ss_dssp EEEEES-HHHHHHHHHHHHHT---------T-E--ESEEEE-TT-SSS-HHHHHHHHCT-SS--EEEEEES----S-HHH
T ss_pred EEEEECCHHHHHHHHHHHHHc---------CCC--eeEEEEeCccccCCHHHHHHHHhcCCCCCEEEEEcc--CCCCHHH
Confidence 478899999885544333222 210 22356667778888899998886643 234444333 2337888
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccc---------cc-cCHHHHHHHHHHcCCEEE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLG---------AF-DPLDEIATVCEKYDLWMH 130 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG---------~~-~~l~~I~~ia~~~g~~l~ 130 (448)
+.+++++.... +| +|++-.+.+..| .+ .+-+....++++.|+...
T Consensus 71 f~~~~~~a~~~--KP-Vv~lk~Grt~~g~~aa~sHTgslag~~~~~~a~~~~aGv~~v 125 (138)
T PF13607_consen 71 FLEAARRAARR--KP-VVVLKAGRTEAGARAAASHTGSLAGDDAVYDAALRQAGVVRV 125 (138)
T ss_dssp HHHHHHHHCCC--S--EEEEE---------------------HHHHHHHHHHCTEEEE
T ss_pred HHHHHHHHhcC--CC-EEEEeCCCchhhhhhhhccCCcccCcHHHHHHHHHHcCceEE
Confidence 88888774332 44 566655554444 32 466777788999998874
No 459
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=27.87 E-value=1.4e+02 Score=26.10 Aligned_cols=53 Identities=11% Similarity=0.071 Sum_probs=40.8
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEec
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDA 133 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~ 133 (448)
...++.+.+.+.|.+.. .....|+++.|+ =...++.++.+.+|++|..+.++.
T Consensus 43 g~~lt~eel~~~I~~~~---~~~~gVt~SGGE---l~~~~l~~ll~~lk~~Gl~i~l~T 95 (147)
T TIGR02826 43 GTKLTPEYLTKTLDKYR---SLISCVLFLGGE---WNREALLSLLKIFKEKGLKTCLYT 95 (147)
T ss_pred CcCCCHHHHHHHHHHhC---CCCCEEEEechh---cCHHHHHHHHHHHHHCCCCEEEEC
Confidence 34689999999987742 123579999999 233569999999999999998885
No 460
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=27.52 E-value=1e+02 Score=27.46 Aligned_cols=68 Identities=13% Similarity=0.245 Sum_probs=34.8
Q ss_pred EEEecCC-CchHHHHHHHHhCCCCCcEEEEecCCCC----CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc
Q psy14299 42 CMFTSED-SHYSMLKAAHWLGIGMDNVIRVKTNERG----QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF 112 (448)
Q Consensus 42 ~Vl~~~~-~H~s~~~~~~~~g~~~~~v~~v~~~~~g----~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~ 112 (448)
+|..... ........|+-.|+ ++..++..... .++.+.+.++|+--.+....|.+|.+.+|...||.+
T Consensus 36 II~L~~e~~~~~~~~f~~~~~I---~l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~~n~PvLiHC~~G~~rTG~v 108 (164)
T PF03162_consen 36 IINLRPEPPSQDFLEFAEENGI---KLIHIPMSSSKDPWVPISEEQVAEALEIILDPRNYPVLIHCNHGKDRTGLV 108 (164)
T ss_dssp EEE--SS---HHHHHHHHHTT----EEEE-------GGG----HHHHHHHHHHHH-GGG-SEEEE-SSSSSHHHHH
T ss_pred EEEecCCCCCHHHHHHHhhcCc---eEEEeccccccCccccCCHHHHHHHHHHHhCCCCCCEEEEeCCCCcchhhH
Confidence 3444433 34456667777787 67777765432 467888888776433333468899999999999964
No 461
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=27.41 E-value=2e+02 Score=26.49 Aligned_cols=64 Identities=16% Similarity=0.143 Sum_probs=41.2
Q ss_pred cEEEEecCCCCCc-CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEE
Q psy14299 66 NVIRVKTNERGQM-ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMH 130 (448)
Q Consensus 66 ~v~~v~~~~~g~i-d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~ 130 (448)
++.++-..++|.. ..-+-|..++-..-.|..|..|++...+- .|...+.+++.+++++||+.++
T Consensus 121 Hv~Pl~a~~gGvl~R~GhtEaavdLa~lAGl~p~avi~eil~~-dG~~~~~~~~~~fA~~~~l~~v 185 (194)
T PF00926_consen 121 HVFPLRARPGGVLERRGHTEAAVDLARLAGLSPVAVICEILDD-DGDMARRDELEEFAKKHGLPIV 185 (194)
T ss_dssp EEEEEEE-TTGGGTSSSHHHHHHHHHHHTTS-SBEEEEEBBET-TSSBHCHHHHHHHHHHTT-EEE
T ss_pred CCccceecCCcccCCCChHHHHHHHHHHhCCCCcEEEEEEeCC-CCCcCCHHHHHHHHHHcCCcEE
Confidence 3555655555532 23334444443334566777777777655 9999999999999999999875
No 462
>PRK11823 DNA repair protein RadA; Provisional
Probab=27.30 E-value=5e+02 Score=27.10 Aligned_cols=82 Identities=16% Similarity=0.220 Sum_probs=46.7
Q ss_pred CeEEEecCCCch-HHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcc--------c
Q psy14299 40 PLCMFTSEDSHY-SMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVL--------G 110 (448)
Q Consensus 40 ~~~Vl~~~~~H~-s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~t--------G 110 (448)
..++|++-.+-. .+..-++.+|....++.... ..+++.+.+.+++ .++.+|++...++.. |
T Consensus 109 ~~vlYvs~Ees~~qi~~ra~rlg~~~~~l~~~~-----e~~l~~i~~~i~~-----~~~~lVVIDSIq~l~~~~~~~~~g 178 (446)
T PRK11823 109 GKVLYVSGEESASQIKLRAERLGLPSDNLYLLA-----ETNLEAILATIEE-----EKPDLVVIDSIQTMYSPELESAPG 178 (446)
T ss_pred CeEEEEEccccHHHHHHHHHHcCCChhcEEEeC-----CCCHHHHHHHHHh-----hCCCEEEEechhhhccccccCCCC
Confidence 446777744332 23333555666433333222 1357777777754 357889998876542 1
Q ss_pred cccCH----HHHHHHHHHcCCEEEE
Q psy14299 111 AFDPL----DEIATVCEKYDLWMHV 131 (448)
Q Consensus 111 ~~~~l----~~I~~ia~~~g~~l~V 131 (448)
....+ .+|.++++++|+.+++
T Consensus 179 ~~~qvr~~~~~L~~~ak~~~itvil 203 (446)
T PRK11823 179 SVSQVRECAAELMRLAKQRGIAVFL 203 (446)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 12222 3577899999986554
No 463
>COG0648 Nfo Endonuclease IV [DNA replication, recombination, and repair]
Probab=26.85 E-value=3.7e+02 Score=26.29 Aligned_cols=80 Identities=18% Similarity=0.202 Sum_probs=45.8
Q ss_pred HHHHHhCCCCCcEEEEecCCCCC----cCHHHHHHHHHHhhhcCCCcEEEEE-eccCCc--cccccCHHHHHHHHHHcC-
Q psy14299 55 KAAHWLGIGMDNVIRVKTNERGQ----MICSFLEQTIQTSLAEKKIPLFVNA-TAGTTV--LGAFDPLDEIATVCEKYD- 126 (448)
Q Consensus 55 ~~~~~~g~~~~~v~~v~~~~~g~----id~e~Le~~l~~~~~~~~~~~lVv~-~~~~t~--tG~~~~l~~I~~ia~~~g- 126 (448)
+.|..+|+ ....+.+..... -.++.+.+.|++..+. +.+..+.. +.+.++ ...+..|++|.+++++.+
T Consensus 94 ~r~~~lG~---~~lv~HpG~~~~~~~e~~l~~i~~~Ln~~~~~-~~v~i~~e~~agegs~~g~~F~~L~eii~~~~~~~~ 169 (280)
T COG0648 94 DRCEQLGA---KLLVFHPGSYLGQGKEEGLNRIAEALNELLEE-EGVIILLENTAGEGSGKGTQFGELAEIIDLIEEKER 169 (280)
T ss_pred HHHHHcCC---cEEEECCccccCCCHHHHHHHHHHHHHHHhhc-cCCeEEEEEeccccCccccchhhHHHHHHhhcccCc
Confidence 55667777 444444332222 2344455555554332 22333322 333331 226788999999999987
Q ss_pred CEEEEecccccc
Q psy14299 127 LWMHVDACWGGS 138 (448)
Q Consensus 127 ~~l~VD~A~~~~ 138 (448)
+-+.+|-+|...
T Consensus 170 igvCiDtcH~~A 181 (280)
T COG0648 170 IGVCIDTCHAFA 181 (280)
T ss_pred eEEEEEchhhhh
Confidence 999999986643
No 464
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=26.85 E-value=5.8e+02 Score=24.83 Aligned_cols=23 Identities=17% Similarity=0.180 Sum_probs=17.3
Q ss_pred cc-cccCH--HHHHHHHHHcCCEEEE
Q psy14299 109 LG-AFDPL--DEIATVCEKYDLWMHV 131 (448)
Q Consensus 109 tG-~~~~l--~~I~~ia~~~g~~l~V 131 (448)
.| +++.+ ..++-+||.||++++|
T Consensus 191 nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 191 DGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred CCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 44 45554 6688899999999987
No 465
>PRK12313 glycogen branching enzyme; Provisional
Probab=26.53 E-value=51 Score=36.14 Aligned_cols=27 Identities=7% Similarity=0.038 Sum_probs=23.9
Q ss_pred ccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 108 VLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 108 ~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
..|..++++++++.||++|+.+++|..
T Consensus 215 ~~Gt~~d~k~lv~~~H~~Gi~VilD~V 241 (633)
T PRK12313 215 RYGTPEDFMYLVDALHQNGIGVILDWV 241 (633)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 456778899999999999999999985
No 466
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=26.52 E-value=4.6e+02 Score=25.80 Aligned_cols=102 Identities=15% Similarity=0.108 Sum_probs=50.5
Q ss_pred CccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCch-H---HHHHHHHhCCCCCcEEEEecCCCCC
Q psy14299 2 NLKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHY-S---MLKAAHWLGIGMDNVIRVKTNERGQ 77 (448)
Q Consensus 2 ~~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~-s---~~~~~~~~g~~~~~v~~v~~~~~g~ 77 (448)
|.+.++|.|-|....-.+..|.+. | ....|++.+.... . +.+-....|+ .+..++-
T Consensus 115 ~g~~ILT~~~S~tv~~~l~~a~~~--------~----~~f~V~v~EsrP~~~G~~~a~~L~~~gI---~vtlI~D----- 174 (301)
T TIGR00511 115 DGDVVMTHCNSEAALSVIKTAFEQ--------G----KDIEVIATETRPRKQGHITAKELRDYGI---PVTLIVD----- 174 (301)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHc--------C----CcEEEEEecCCCcchHHHHHHHHHHCCC---CEEEEeh-----
Confidence 445677777665544444444332 1 3344555543322 1 2222223345 5666652
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc-cccCH--HHHHHHHHHcCCEEEEe
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG-AFDPL--DEIATVCEKYDLWMHVD 132 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG-~~~~l--~~I~~ia~~~g~~l~VD 132 (448)
..+-..+.+ -.+.++-...-...| .++.+ ..++-+||.++++++|=
T Consensus 175 ---sa~~~~m~~------vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~ 223 (301)
T TIGR00511 175 ---SAVRYFMKE------VDHVVVGADAITANGALINKIGTSQLALAAREARVPFMVA 223 (301)
T ss_pred ---hHHHHHHHh------CCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEE
Confidence 233334433 123333333333344 45553 66888899999988764
No 467
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=26.38 E-value=6.4e+02 Score=24.91 Aligned_cols=100 Identities=15% Similarity=0.044 Sum_probs=52.3
Q ss_pred CccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH-----HHHHHHHhCCCCCcEEEEecCCCC
Q psy14299 2 NLKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS-----MLKAAHWLGIGMDNVIRVKTNERG 76 (448)
Q Consensus 2 ~~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s-----~~~~~~~~g~~~~~v~~v~~~~~g 76 (448)
|...++|.+-+.+.+-.+..|+.+. .+..|++. .+++. ..+..+..|+ .+..|+
T Consensus 119 dg~~IlTh~~S~~v~~~l~~A~~~~------------k~~~V~Vt-ESRP~~eG~~~ak~L~~~gI---~~~~I~----- 177 (301)
T COG1184 119 DGDVILTHSFSKTVLEVLKTAADRG------------KRFKVIVT-ESRPRGEGRIMAKELRQSGI---PVTVIV----- 177 (301)
T ss_pred CCCEEEEecCcHHHHHHHHHhhhcC------------CceEEEEE-cCCCcchHHHHHHHHHHcCC---ceEEEe-----
Confidence 4567777777777666666666641 22334443 12322 2233344454 455544
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEE
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHV 131 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~V 131 (448)
| .++...+++ --+.++-...-...|.+-. --.|+..||+.+.+++|
T Consensus 178 --D-sa~~~~~~~------vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 178 --D-SAVGAFMSR------VDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred --c-hHHHHHHHh------CCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 1 233344433 1234444444444554322 35678888888888854
No 468
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=26.03 E-value=2.3e+02 Score=26.79 Aligned_cols=55 Identities=11% Similarity=0.005 Sum_probs=26.6
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc---cccC-------HHHHHHHHHHcCCEEEE
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG---AFDP-------LDEIATVCEKYDLWMHV 131 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG---~~~~-------l~~I~~ia~~~g~~l~V 131 (448)
.+++++++..++.....+....+|++.+-.-... .-+. .++|.++|+++|+++++
T Consensus 111 ~~~~~~i~~~i~~~~~~~~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i~vi~ 175 (259)
T PF03796_consen 111 SLTIDDIESKIRRLKREGKKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNIPVIA 175 (259)
T ss_dssp S-BHHHHHHHHHHHHHHSTTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CCCHHHHHHHHHHHHhhccCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 4566666666655443333455666655333222 1111 23345566666666654
No 469
>KOG3974|consensus
Probab=25.95 E-value=1.7e+02 Score=28.30 Aligned_cols=48 Identities=17% Similarity=0.146 Sum_probs=30.2
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccC-CccccccCHHHHHHHHHHcCCEEEEec
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGT-TVLGAFDPLDEIATVCEKYDLWMHVDA 133 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~-t~tG~~~~l~~I~~ia~~~g~~l~VD~ 133 (448)
+.+.+++.|.+ ..+|++--+- -..+..-.+.+|.+++++++++++||+
T Consensus 91 av~~i~k~L~R-------lhavVIGPGLGRdp~~~k~i~~iley~~~~dvP~VIDa 139 (306)
T KOG3974|consen 91 AVDIIEKLLQR-------LHAVVIGPGLGRDPAILKEIAKILEYLRGKDVPLVIDA 139 (306)
T ss_pred hHhHHHHHHhh-------eeEEEECCCCCCCHHHHHHHHHHHHHHhcCCCcEEEcC
Confidence 45666666643 2344442211 122344557889999999999999996
No 470
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=25.83 E-value=5.4e+02 Score=23.86 Aligned_cols=87 Identities=8% Similarity=-0.009 Sum_probs=41.4
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
.-.++++||+-++=.++...... .| ..+++++...=....+.....+. ++..+..| --|.++
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~-------~G-----~~vv~~~~~~~~~~~~~~~~~~~---~~~~~~~D---l~~~~~ 69 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAK-------AG-----ADIVGVGVAEAPETQAQVEALGR---KFHFITAD---LIQQKD 69 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-------CC-----CEEEEecCchHHHHHHHHHHcCC---eEEEEEeC---CCCHHH
Confidence 34678888887765554332222 11 22444443210111111122232 45555554 236777
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTT 107 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t 107 (448)
+++.+++..+...+...++.+.+..
T Consensus 70 ~~~~~~~~~~~~g~iD~lv~~ag~~ 94 (251)
T PRK12481 70 IDSIVSQAVEVMGHIDILINNAGII 94 (251)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcC
Confidence 7777776443333455666555543
No 471
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=25.82 E-value=7.1e+02 Score=26.65 Aligned_cols=47 Identities=6% Similarity=0.057 Sum_probs=31.7
Q ss_pred CeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcC
Q psy14299 40 PLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEK 94 (448)
Q Consensus 40 ~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~ 94 (448)
...|+.-...-..+...+.++++ ++..+... +.++++..+.+.+++|
T Consensus 99 ~ia~vg~~~~~~~~~~~~~ll~~---~i~~~~~~-----~~~e~~~~~~~l~~~G 145 (526)
T TIGR02329 99 SIGVVTHQDTPPALRRFQAAFNL---DIVQRSYV-----TEEDARSCVNDLRARG 145 (526)
T ss_pred cEEEEecCcccHHHHHHHHHhCC---ceEEEEec-----CHHHHHHHHHHHHHCC
Confidence 33455445555677788888888 45555544 6788888888776665
No 472
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=25.65 E-value=5.4e+02 Score=25.82 Aligned_cols=62 Identities=16% Similarity=0.039 Sum_probs=43.5
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEeccC-Cc---cccccCHHHHHHHHHHcCCEEEEeccccccc
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATAGT-TV---LGAFDPLDEIATVCEKYDLWMHVDACWGGSL 139 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~~~-t~---tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~ 139 (448)
..+++++..+.+.....| ++.++++-.+. +. +-...|+..|..+.+..+.++++|..|+.|.
T Consensus 210 ~~ti~E~l~A~e~i~~~G-N~~viL~erG~~tf~~~~~~~ldl~ai~~lk~~~~lPVi~d~sH~~G~ 275 (335)
T PRK08673 210 SATIEEWLMAAEYILAEG-NPNVILCERGIRTFETATRNTLDLSAVPVIKKLTHLPVIVDPSHATGK 275 (335)
T ss_pred CCCHHHHHHHHHHHHHcC-CCeEEEEECCCCCCCCcChhhhhHHHHHHHHHhcCCCEEEeCCCCCcc
Confidence 448899998888765555 34444444333 32 2244678888888888899999999999886
No 473
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=25.60 E-value=1.5e+02 Score=27.85 Aligned_cols=69 Identities=13% Similarity=0.084 Sum_probs=41.0
Q ss_pred HHHHHHHHh-CCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccc--ccCHHHHHHHHHHcCCE
Q psy14299 52 SMLKAAHWL-GIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA--FDPLDEIATVCEKYDLW 128 (448)
Q Consensus 52 s~~~~~~~~-g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~--~~~l~~I~~ia~~~g~~ 128 (448)
.+..+..++ .++...+...|.. |.=..+++...-+.+.+.+.. + -+||- ++.+++|.++|.+.|+.
T Consensus 136 ~vetAiaml~dmG~~SiKffPM~--Gl~~leE~~avA~aca~~g~~-----l----EPTGGIdl~Nf~~I~~i~ldaGv~ 204 (236)
T TIGR03581 136 PIETAIAMLKDMGGSSVKFFPMG--GLKHLEEYAAVAKACAKHGFY-----L----EPTGGIDLDNFEEIVQIALDAGVE 204 (236)
T ss_pred eHHHHHHHHHHcCCCeeeEeecC--CcccHHHHHHHHHHHHHcCCc-----c----CCCCCccHHhHHHHHHHHHHcCCC
Confidence 355555544 3444466677753 333556666655555444421 1 44664 47799999999999886
Q ss_pred EEE
Q psy14299 129 MHV 131 (448)
Q Consensus 129 l~V 131 (448)
.++
T Consensus 205 kvi 207 (236)
T TIGR03581 205 KVI 207 (236)
T ss_pred eec
Confidence 543
No 474
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=25.51 E-value=2.9e+02 Score=24.59 Aligned_cols=77 Identities=9% Similarity=-0.007 Sum_probs=44.2
Q ss_pred EEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHH
Q psy14299 42 CMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATV 121 (448)
Q Consensus 42 ~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~i 121 (448)
.+|....+...+.+++...|+ +++... |..|++-.-.+++-..+ ++.-.+++..+.. |+..+++-
T Consensus 60 R~Y~~a~a~~~l~~~l~~~Gf---~pv~~k----G~~Dv~laIDame~~~~--~~iD~~vLvSgD~------DF~~Lv~~ 124 (160)
T TIGR00288 60 KVLLNQYASDKLIEAVVNQGF---EPIIVA----GDVDVRMAVEAMELIYN--PNIDAVALVTRDA------DFLPVINK 124 (160)
T ss_pred EEEechhccHHHHHHHHHCCc---eEEEec----CcccHHHHHHHHHHhcc--CCCCEEEEEeccH------hHHHHHHH
Confidence 355555566667777777777 443332 34444444444432111 1233555555554 67778888
Q ss_pred HHHcCCEEEEec
Q psy14299 122 CEKYDLWMHVDA 133 (448)
Q Consensus 122 a~~~g~~l~VD~ 133 (448)
+|++|..+++=|
T Consensus 125 lre~G~~V~v~g 136 (160)
T TIGR00288 125 AKENGKETIVIG 136 (160)
T ss_pred HHHCCCEEEEEe
Confidence 888899887755
No 475
>PRK05402 glycogen branching enzyme; Provisional
Probab=25.25 E-value=54 Score=36.62 Aligned_cols=30 Identities=17% Similarity=0.213 Sum_probs=25.2
Q ss_pred CCccccccCHHHHHHHHHHcCCEEEEeccc
Q psy14299 106 TTVLGAFDPLDEIATVCEKYDLWMHVDACW 135 (448)
Q Consensus 106 ~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~ 135 (448)
+...|..++++++++.||++|+.+++|..+
T Consensus 308 ~~~~Gt~~dfk~lV~~~H~~Gi~VilD~V~ 337 (726)
T PRK05402 308 TSRFGTPDDFRYFVDACHQAGIGVILDWVP 337 (726)
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 344567788999999999999999999853
No 476
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=24.91 E-value=3.5e+02 Score=27.71 Aligned_cols=51 Identities=16% Similarity=0.087 Sum_probs=34.0
Q ss_pred CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEec
Q psy14299 74 ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDA 133 (448)
Q Consensus 74 ~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~ 133 (448)
.+-.-|++-|++.++... +.++.+-.++.-. ++++++++|++||..+++=+
T Consensus 197 g~~~kD~eVLeaaLe~~~--G~kpLL~SAt~e~-------Ny~~ia~lAk~yg~~Vvv~s 247 (389)
T TIGR00381 197 GNPEKDPLVLEKAAEVAE--GERCLLASANLDL-------DYEKIANAAKKYGHVVLSWT 247 (389)
T ss_pred CCCcCCHHHHHHHHHHhC--CCCcEEEecCchh-------hHHHHHHHHHHhCCeEEEEc
Confidence 344568888888887642 3344333232211 79999999999999887654
No 477
>PRK10785 maltodextrin glucosidase; Provisional
Probab=24.85 E-value=54 Score=35.67 Aligned_cols=56 Identities=11% Similarity=0.070 Sum_probs=37.6
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEec---------------cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATA---------------GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~---------------~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
|++.+.+.|+-.++-|.....+.-.. .....|..++++++++-||++|+.+++|..
T Consensus 177 Dl~GI~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V 247 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGV 247 (598)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 77888888865544443322222111 122245667899999999999999999985
No 478
>COG2052 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.13 E-value=1.5e+02 Score=22.80 Aligned_cols=33 Identities=15% Similarity=0.349 Sum_probs=26.3
Q ss_pred cEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccc
Q psy14299 97 PLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWG 136 (448)
Q Consensus 97 ~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~ 136 (448)
.++|.++.+++ .|++.+.+-+|..|.+ +|+.||
T Consensus 17 nRviaIVsPES-----aPiKRii~eArdr~~L--IDATYG 49 (89)
T COG2052 17 NRVIAIVSPES-----APIKRIIQEARDRGML--IDATYG 49 (89)
T ss_pred ceEEEEECCCc-----ccHHHHHHHHHhcCcE--EEcccC
Confidence 35677777766 7999999999999875 588777
No 479
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=23.99 E-value=4e+02 Score=25.75 Aligned_cols=62 Identities=16% Similarity=0.013 Sum_probs=40.4
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEeccC-Cccc---cccCHHHHHHHHHHcCCEEEEeccccccc
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATAGT-TVLG---AFDPLDEIATVCEKYDLWMHVDACWGGSL 139 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~~~-t~tG---~~~~l~~I~~ia~~~g~~l~VD~A~~~~~ 139 (448)
..+++++..+.+.....|. +.++++..+. +.++ ..-++..|..+.+..+.++.+|..|+.|.
T Consensus 144 ~~s~~e~~~A~e~i~~~Gn-~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G~ 209 (266)
T PRK13398 144 SATLEEWLYAAEYIMSEGN-ENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATGR 209 (266)
T ss_pred CCCHHHHHHHHHHHHhcCC-CeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCcccc
Confidence 3488899988877655553 3444444332 1111 23467777777777799999999998873
No 480
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=23.87 E-value=5.4e+02 Score=25.40 Aligned_cols=102 Identities=16% Similarity=0.132 Sum_probs=50.9
Q ss_pred CccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCch-H---HHHHHHHhCCCCCcEEEEecCCCCC
Q psy14299 2 NLKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHY-S---MLKAAHWLGIGMDNVIRVKTNERGQ 77 (448)
Q Consensus 2 ~~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~-s---~~~~~~~~g~~~~~v~~v~~~~~g~ 77 (448)
|.+.++|.|-|......+..|.+. | .+..|++.+..-. . ..+-....|+ .+..++-
T Consensus 120 ~g~~ILT~~~S~tv~~~l~~A~~~--------~----k~~~V~v~EsrP~~~G~~~a~~L~~~GI---~vtlI~D----- 179 (310)
T PRK08535 120 DGDVIMTHCNSSAALSVIKTAHEQ--------G----KDIEVIATETRPRNQGHITAKELAEYGI---PVTLIVD----- 179 (310)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHC--------C----CeEEEEEecCCchhhHHHHHHHHHHCCC---CEEEEeh-----
Confidence 445677877665555555444332 1 3345555543322 1 1122223355 5666652
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc-cccCH--HHHHHHHHHcCCEEEEe
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG-AFDPL--DEIATVCEKYDLWMHVD 132 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG-~~~~l--~~I~~ia~~~g~~l~VD 132 (448)
..+-..+.+ -.+.++-...-..+| .++.+ ..++-+||.|+++++|=
T Consensus 180 ---sav~~~m~~------vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~ 228 (310)
T PRK08535 180 ---SAVRYFMKD------VDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMVA 228 (310)
T ss_pred ---hHHHHHHHh------CCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEe
Confidence 233334433 122333333333355 44443 66888899999998764
No 481
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=23.83 E-value=2.8e+02 Score=25.62 Aligned_cols=64 Identities=14% Similarity=0.121 Sum_probs=42.7
Q ss_pred cEEEEecCCCCCc-CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEE
Q psy14299 66 NVIRVKTNERGQM-ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMH 130 (448)
Q Consensus 66 ~v~~v~~~~~g~i-d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~ 130 (448)
++.++...++|.+ ..-+-|..++-..-.|..|..|++...+- .|...+.+++.++|++||++++
T Consensus 126 HvfPL~a~~gGvl~R~GhTEaavdL~~lAGl~p~~vicEil~~-dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 126 HVFPLRAADGGVLTRGGHTEASVDLAELAGLKPAGVICEMMND-DGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred ccceEEeccCCCcCCCChHHHHHHHHHHcCCCceEEEEEEeCC-CCCccCHHHHHHHHHHcCCcEE
Confidence 4666666555432 23334444443334556676666666544 8999999999999999999983
No 482
>PRK05876 short chain dehydrogenase; Provisional
Probab=23.64 E-value=6e+02 Score=24.04 Aligned_cols=43 Identities=16% Similarity=0.012 Sum_probs=23.7
Q ss_pred cEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccc
Q psy14299 66 NVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA 111 (448)
Q Consensus 66 ~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~ 111 (448)
++..++.| --|.+++++.+++..+...++.+++-+.+....|.
T Consensus 56 ~~~~~~~D---v~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~ 98 (275)
T PRK05876 56 DVHGVMCD---VRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGP 98 (275)
T ss_pred eEEEEeCC---CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence 35555554 22677888877664443334556666665544443
No 483
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=23.22 E-value=1.4e+02 Score=26.94 Aligned_cols=49 Identities=22% Similarity=0.277 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcC--CEEEEecccccc
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYD--LWMHVDACWGGS 138 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g--~~l~VD~A~~~~ 138 (448)
|..+++++++.. ...+++ -+|.+..|+++.+..+++| +++|||-..|..
T Consensus 12 ~~~~le~~les~------~~~vfl-----L~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~ 62 (181)
T COG1954 12 DNKDLEKALESE------SQYVFL-----LTGHILNIKEIVKKLKNRGKTVFIHVDLVEGLS 62 (181)
T ss_pred hHHHHHHHhcCC------CeEEEE-----EechhhhHHHHHHHHHhCCcEEEEEeHHhcccC
Confidence 567788888652 334333 2677889999999999987 678889777654
No 484
>PLN03244 alpha-amylase; Provisional
Probab=23.13 E-value=66 Score=36.04 Aligned_cols=32 Identities=16% Similarity=0.260 Sum_probs=27.7
Q ss_pred ccCCccccccCHHHHHHHHHHcCCEEEEeccc
Q psy14299 104 AGTTVLGAFDPLDEIATVCEKYDLWMHVDACW 135 (448)
Q Consensus 104 ~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~ 135 (448)
+++...|..++++++++-||++|+-+++|-.+
T Consensus 432 ApssRYGTPeDLK~LVD~aH~~GI~VILDvV~ 463 (872)
T PLN03244 432 AASSRYGTPDDFKRLVDEAHGLGLLVFLDIVH 463 (872)
T ss_pred ccCcccCCHHHHHHHHHHHHHCCCEEEEEecC
Confidence 44566788899999999999999999999865
No 485
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=23.12 E-value=3.1e+02 Score=29.52 Aligned_cols=102 Identities=17% Similarity=0.056 Sum_probs=59.8
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCC--eEEEecCCCc----hHHHHHHHHhCCCCCcEEEEecCCCC
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPP--LCMFTSEDSH----YSMLKAAHWLGIGMDNVIRVKTNERG 76 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~--~~Vl~~~~~H----~s~~~~~~~~g~~~~~v~~v~~~~~g 76 (448)
..|+|.+||-.|-++|..+++..-.. .. ..|=. ..++ ......+..+|. ..+.+.
T Consensus 232 pvg~~lSGGlDSS~Iaa~a~~~~~~~----------~~~~fsvg~-~~~~~~D~~~a~~~A~~lg~---~h~~~~----- 292 (542)
T COG0367 232 PVGVFLSGGLDSSLIAAIAAEELGKE----------GKTTFTVGF-EDSDSPDAKYARAVAKFLGT---PHHEII----- 292 (542)
T ss_pred cEEEEeCCCccHHHHHHHHHHhcccc----------ceeeeEeec-CCCCCchHHHHHHHHHHhCC---CcEEEe-----
Confidence 35889999998877776655542000 01 11211 1221 123455666676 233333
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEec
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDA 133 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~ 133 (448)
+.++++..++.+- +...-.....+...|+--+++.+++++.+++..|
T Consensus 293 -~~~~e~~~~~~~v---------v~~~~~p~~~~~~~ply~~~~~a~~~g~kVvLSG 339 (542)
T COG0367 293 -LTNEELLNALPEV---------VKALDTPGGMAASIPLYLLSRKARAEGEKVVLSG 339 (542)
T ss_pred -ecHHHHHHHHHHH---------HhhcCCCCcccchhHHHHHHHhhhhcCcEEeecC
Confidence 3667787777552 2222222226778899999999999999998865
No 486
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=23.10 E-value=63 Score=35.29 Aligned_cols=28 Identities=14% Similarity=0.148 Sum_probs=24.1
Q ss_pred ccccccCHHHHHHHHHHcCCEEEEeccc
Q psy14299 108 VLGAFDPLDEIATVCEKYDLWMHVDACW 135 (448)
Q Consensus 108 ~tG~~~~l~~I~~ia~~~g~~l~VD~A~ 135 (448)
..|..++++++++.||++|+.+++|..+
T Consensus 201 ~~Gt~~dlk~lV~~~H~~Gi~VilD~V~ 228 (613)
T TIGR01515 201 RFGTPDDFMYFVDACHQAGIGVILDWVP 228 (613)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3466678999999999999999999853
No 487
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=23.04 E-value=7.6e+02 Score=24.60 Aligned_cols=85 Identities=12% Similarity=0.084 Sum_probs=44.8
Q ss_pred CeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc------cc-
Q psy14299 40 PLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG------AF- 112 (448)
Q Consensus 40 ~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG------~~- 112 (448)
+.++|++ .+|..-...++.+|+...++...+++ +.++....+....+. ..+.+|++...+...- ..
T Consensus 84 ~~v~yId-~E~~~~~~~a~~lGvd~~~l~v~~p~-----~~eq~l~~~~~li~~-~~~~lIVIDSv~al~~~~E~e~~~g 156 (321)
T TIGR02012 84 GTAAFID-AEHALDPVYARKLGVDIDNLLVSQPD-----TGEQALEIAETLVRS-GAVDIIVVDSVAALVPKAEIEGEMG 156 (321)
T ss_pred CcEEEEc-ccchhHHHHHHHcCCCHHHeEEecCC-----CHHHHHHHHHHHhhc-cCCcEEEEcchhhhccchhhccccc
Confidence 4567776 45544445566677765556655543 223333333322222 2467888776654321 10
Q ss_pred ------------cCHHHHHHHHHHcCCEEEE
Q psy14299 113 ------------DPLDEIATVCEKYDLWMHV 131 (448)
Q Consensus 113 ------------~~l~~I~~ia~~~g~~l~V 131 (448)
.-+..|..+++++|+.+++
T Consensus 157 ~~~~~~~aR~m~~~lr~L~~~l~~~~~tvi~ 187 (321)
T TIGR02012 157 DSHVGLQARLMSQALRKLTGALSKSNTTAIF 187 (321)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 1244566777888877643
No 488
>smart00839 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase. Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction.
Probab=22.90 E-value=3.6e+02 Score=21.81 Aligned_cols=58 Identities=9% Similarity=-0.105 Sum_probs=32.6
Q ss_pred HHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCC---CHHHHH-HHHHHHHHHHHHhHHhhh
Q psy14299 380 RIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPAS---SRQDMD-YAIDQIELRGAEVDLEMQ 441 (448)
Q Consensus 380 ~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~---t~edid-~l~~al~~~~~~~~~~~~ 441 (448)
+-.+.|.++|++++ |...-.. +.+..|-.....+ +++++. ++.+.|.+...++...++
T Consensus 39 ~a~~~L~~rGi~~~-PD~~~Na---GGvi~s~~E~~~~~~~~~e~v~~~~~~~i~~~~~~v~~~a~ 100 (102)
T smart00839 39 EADDILEDRGVLYA-PDFAANA---GGVIVSALEMLQNLARTAEEVFTDLSEIMRNALEEIFETAQ 100 (102)
T ss_pred HHHHHHHHCCCEEc-CcceecC---CCEEeehhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45677888895544 4433333 3344443211122 667766 788888888777654443
No 489
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=22.78 E-value=3e+02 Score=19.87 Aligned_cols=47 Identities=13% Similarity=0.019 Sum_probs=29.3
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEE
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMH 130 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~ 130 (448)
++.+.++++-+...+ .+ -..+.++--.+..| ..++.+.++++|+.++
T Consensus 12 ~~~~~~~~~~~~a~~---~g--~~~v~iTDh~~~~~----~~~~~~~~~~~gi~~i 58 (67)
T smart00481 12 DGALSPEELVKRAKE---LG--LKAIAITDHGNLFG----AVEFYKAAKKAGIKPI 58 (67)
T ss_pred cccCCHHHHHHHHHH---cC--CCEEEEeeCCcccC----HHHHHHHHHHcCCeEE
Confidence 566777777766655 22 34555554444444 4577788888887664
No 490
>PLN00196 alpha-amylase; Provisional
Probab=22.56 E-value=63 Score=33.63 Aligned_cols=28 Identities=11% Similarity=0.090 Sum_probs=25.6
Q ss_pred CccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 107 TVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 107 t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
+..|..++++++++-||++|+.+++|..
T Consensus 86 ~~fGt~~elk~Lv~~aH~~GIkVilDvV 113 (428)
T PLN00196 86 SKYGNEAQLKSLIEAFHGKGVQVIADIV 113 (428)
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4579999999999999999999999985
No 491
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=22.37 E-value=2.1e+02 Score=25.83 Aligned_cols=77 Identities=18% Similarity=0.183 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCE--EEEec-ccccccccccchhhhhcCCCCcc
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLW--MHVDA-CWGGSLIFSEKYSFVLKGINRAN 156 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~--l~VD~-A~~~~~~~~~~~~~~~~~~~~aD 156 (448)
.+.|++.|++..+++ ...|++.- +++-|.++...+|.+..++...+ ..|++ |.++|.+..- .+|
T Consensus 15 ~~~l~~~l~~a~~~~--~~~ivl~i-nspGG~v~~~~~I~~~l~~~~~pvva~V~g~AaSaG~~ia~----------a~d 81 (178)
T cd07021 15 AAFVERALKEAKEEG--ADAVVLDI-DTPGGRVDSALEIVDLILNSPIPTIAYVNDRAASAGALIAL----------AAD 81 (178)
T ss_pred HHHHHHHHHHHHhCC--CCeEEEEE-ECcCCCHHHHHHHHHHHHhCCCCEEEEECCchHHHHHHHHH----------hCC
Confidence 455777787655443 22333333 67789999999999999887654 55665 5555544211 257
Q ss_pred EEEECCccccCCC
Q psy14299 157 SVSWNPHKMLGAP 169 (448)
Q Consensus 157 ~~~~s~hK~l~~P 169 (448)
.+...++-.++.+
T Consensus 82 ~i~m~p~a~iG~~ 94 (178)
T cd07021 82 EIYMAPGATIGAA 94 (178)
T ss_pred eEEECCCCeEecC
Confidence 7777776655543
No 492
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=22.33 E-value=2.7e+02 Score=27.34 Aligned_cols=72 Identities=19% Similarity=0.173 Sum_probs=41.1
Q ss_pred ecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHH
Q psy14299 45 TSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEK 124 (448)
Q Consensus 45 ~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~ 124 (448)
.+-..+.++.+.-.-.+... -++.+| .+.+.++++++.+.+ -..+|+++.+.. ..+-++|.++|++
T Consensus 49 ~G~~~y~sv~dlp~~~~~Dl-Avi~vp--------~~~v~~~l~e~~~~g-vk~avI~s~Gf~----~~~~~~l~~~a~~ 114 (291)
T PRK05678 49 LGLPVFNTVAEAVEATGANA-SVIYVP--------PPFAADAILEAIDAG-IDLIVCITEGIP----VLDMLEVKAYLER 114 (291)
T ss_pred eCeeccCCHHHHhhccCCCE-EEEEcC--------HHHHHHHHHHHHHCC-CCEEEEECCCCC----HHHHHHHHHHHHH
Confidence 34556667777654211211 233343 355555555555544 234566666642 2333489999999
Q ss_pred cCCEEE
Q psy14299 125 YDLWMH 130 (448)
Q Consensus 125 ~g~~l~ 130 (448)
+|+.++
T Consensus 115 ~girvl 120 (291)
T PRK05678 115 KKTRLI 120 (291)
T ss_pred cCCEEE
Confidence 999986
No 493
>PRK06114 short chain dehydrogenase; Provisional
Probab=22.30 E-value=6.2e+02 Score=23.35 Aligned_cols=88 Identities=13% Similarity=0.118 Sum_probs=41.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHh-CCCCCcEEEEecCCCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWL-GIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~-g~~~~~v~~v~~~~~g~id~e~ 82 (448)
..++++||+-++=.++...... +| ..+++++........+....+ ..+. ++..++.| --|.+.
T Consensus 9 k~~lVtG~s~gIG~~ia~~l~~-------~G-----~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D---~~~~~~ 72 (254)
T PRK06114 9 QVAFVTGAGSGIGQRIAIGLAQ-------AG-----ADVALFDLRTDDGLAETAEHIEAAGR-RAIQIAAD---VTSKAD 72 (254)
T ss_pred CEEEEECCCchHHHHHHHHHHH-------CC-----CEEEEEeCCcchHHHHHHHHHHhcCC-ceEEEEcC---CCCHHH
Confidence 4567778776654443322221 12 234555543333333333222 1111 35556554 236777
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTT 107 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t 107 (448)
+++.+++..+...+...++.+.+..
T Consensus 73 i~~~~~~~~~~~g~id~li~~ag~~ 97 (254)
T PRK06114 73 LRAAVARTEAELGALTLAVNAAGIA 97 (254)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 8877776444333445666555543
No 494
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF). The domain forms a apha/beta/apha fold which binds to Adenosine nucleotide.
Probab=22.29 E-value=2.3e+02 Score=21.43 Aligned_cols=54 Identities=9% Similarity=-0.056 Sum_probs=34.6
Q ss_pred CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccc
Q psy14299 76 GQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGS 138 (448)
Q Consensus 76 g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~ 138 (448)
|..|-..+-....+.... .+.++.+... .-.+.+.+.++++|+..+++|.++-.
T Consensus 7 gg~dS~~~l~~~~~~~~~--~~~~~~~~~~-------~~~~~~~~~a~~~~~~~Iv~G~~~~d 60 (86)
T cd01984 7 GGLDSSVLLHLAKRLKSG--GPEVVALVVV-------AFVRILKRLAAEEGADVIILGHNADD 60 (86)
T ss_pred CCHHHHHHHHHHHHHHhc--CCCEEEEEeH-------HHHHHHHHHHHHcCCCEEEEcCCchh
Confidence 555666666666553222 2333333333 56678889999999999999987643
No 495
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=22.27 E-value=2.6e+02 Score=27.28 Aligned_cols=74 Identities=18% Similarity=0.218 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCC--EEEE-ecccccccccccchhhhhcCCCCc
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDL--WMHV-DACWGGSLIFSEKYSFVLKGINRA 155 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~--~l~V-D~A~~~~~~~~~~~~~~~~~~~~a 155 (448)
|.+.+.++++...+. .+..+++ .|+-|.++.-.+|+++.+++.. .++| +-|.++|.+..- .+
T Consensus 76 dse~v~raI~~~~~~--~~IdLii---~TpGG~v~AA~~I~~~l~~~~~~v~v~VP~~A~SAGTlIAL----------aA 140 (285)
T PF01972_consen 76 DSEFVLRAIREAPKD--KPIDLII---HTPGGLVDAAEQIARALREHPAKVTVIVPHYAMSAGTLIAL----------AA 140 (285)
T ss_pred hHHHHHHHHHhcCCC--CceEEEE---ECCCCcHHHHHHHHHHHHhCCCCEEEEECcccccHHHHHHH----------hC
Confidence 556666666543211 2333332 5889999999999999999854 3445 557777766321 37
Q ss_pred cEEEECCccccC
Q psy14299 156 NSVSWNPHKMLG 167 (448)
Q Consensus 156 D~~~~s~hK~l~ 167 (448)
|-+.++.+-.+|
T Consensus 141 DeIvM~p~a~LG 152 (285)
T PF01972_consen 141 DEIVMGPGAVLG 152 (285)
T ss_pred CeEEECCCCccC
Confidence 888888887776
No 496
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=21.70 E-value=1.6e+02 Score=29.09 Aligned_cols=56 Identities=5% Similarity=-0.014 Sum_probs=35.8
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEE
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMH 130 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~ 130 (448)
+|.+|.+.+++.++...+.|-.-.++.-+.++...=..+.-+++.+.+.+. ++.++
T Consensus 23 ~g~iD~~~l~~lv~~li~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~grvpvi 81 (309)
T cd00952 23 TDTVDLDETARLVERLIAAGVDGILTMGTFGECATLTWEEKQAFVATVVETVAGRVPVF 81 (309)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcccccchhCCHHHHHHHHHHHHHHhCCCCCEE
Confidence 489999999999998777664433333444444444556666777766553 35554
No 497
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=21.64 E-value=5e+02 Score=21.97 Aligned_cols=68 Identities=15% Similarity=0.133 Sum_probs=43.7
Q ss_pred HHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc---------cCHHHHHHHHHH
Q psy14299 54 LKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF---------DPLDEIATVCEK 124 (448)
Q Consensus 54 ~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---------~~l~~I~~ia~~ 124 (448)
.+.+...|+ .++.+|+..+ .++.+++++..+-. +....|.++-+.+|. -+|.+ .+.++|.+.+++
T Consensus 50 ~~~a~~~gl---~y~~iPv~~~-~~~~~~v~~f~~~~-~~~~~pvL~HC~sG~-Rt~~l~al~~~~~g~~~~~i~~~~~~ 123 (135)
T TIGR01244 50 KAAAEAAGV---TYHHQPVTAG-DITPDDVETFRAAI-GAAEGPVLAYCRSGT-RSSLLWGFRQAAEGVPVEEIVRRAQA 123 (135)
T ss_pred HHHHHHCCC---eEEEeecCCC-CCCHHHHHHHHHHH-HhCCCCEEEEcCCCh-HHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 345566788 7888887654 46666654443321 222467777777777 67753 577888888888
Q ss_pred cCC
Q psy14299 125 YDL 127 (448)
Q Consensus 125 ~g~ 127 (448)
.|.
T Consensus 124 ~G~ 126 (135)
T TIGR01244 124 AGY 126 (135)
T ss_pred cCC
Confidence 765
No 498
>PF01645 Glu_synthase: Conserved region in glutamate synthase; InterPro: IPR002932 Ferredoxin-dependent glutamate synthases have been implicated in a number of functions including photorespiration in Arabidopsis where they may also play a role in primary nitrogen assimilation in roots []. This region is expressed as a seperate subunit in the glutamate synthase alpha subunit from archaebacteria, or part of a large multidomain enzyme in other organisms. The aligned region of these proteins contains a putative FMN binding site and Fe-S cluster.; GO: 0015930 glutamate synthase activity, 0016638 oxidoreductase activity, acting on the CH-NH2 group of donors, 0006537 glutamate biosynthetic process, 0055114 oxidation-reduction process; PDB: 1EA0_A 2VDC_E 1OFE_A 1LLW_A 1OFD_A 1LLZ_A 1LM1_A.
Probab=21.63 E-value=6.7e+02 Score=25.55 Aligned_cols=9 Identities=11% Similarity=0.165 Sum_probs=4.2
Q ss_pred ccEEEECCc
Q psy14299 155 ANSVSWNPH 163 (448)
Q Consensus 155 aD~~~~s~h 163 (448)
+|+++++++
T Consensus 228 ~D~ItIDG~ 236 (368)
T PF01645_consen 228 ADFITIDGA 236 (368)
T ss_dssp -SEEEEE-T
T ss_pred CCEEEEeCC
Confidence 566666654
No 499
>PRK05872 short chain dehydrogenase; Provisional
Probab=21.54 E-value=7.2e+02 Score=23.78 Aligned_cols=93 Identities=15% Similarity=0.064 Sum_probs=47.1
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
...++.+||+-++=.++.-.... +| -.+++++. ......+....++.+ ..+..++.| .-|.++
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~-------~G-----~~V~~~~r-~~~~l~~~~~~l~~~-~~~~~~~~D---v~d~~~ 71 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHA-------RG-----AKLALVDL-EEAELAALAAELGGD-DRVLTVVAD---VTDLAA 71 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-------CC-----CEEEEEeC-CHHHHHHHHHHhcCC-CcEEEEEec---CCCHHH
Confidence 34567778776654433222221 12 23444443 333444444444321 245555544 237788
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccc
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAF 112 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~ 112 (448)
+++.+++..+...+..+++.+.+....+.+
T Consensus 72 v~~~~~~~~~~~g~id~vI~nAG~~~~~~~ 101 (296)
T PRK05872 72 MQAAAEEAVERFGGIDVVVANAGIASGGSV 101 (296)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCcCc
Confidence 888877654443345677777765544433
No 500
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=21.10 E-value=2e+02 Score=26.77 Aligned_cols=48 Identities=10% Similarity=0.205 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCcccc-ccCHHHHHHHHHHcCCEEEEec
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA-FDPLDEIATVCEKYDLWMHVDA 133 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~-~~~l~~I~~ia~~~g~~l~VD~ 133 (448)
.+.++++++. ...++.+=--...+-. ..-.+++.++|++|++.++|++
T Consensus 24 ~~~ve~al~~------Gv~~vQlR~K~~~~~~~~~~a~~~~~lc~~~~v~liINd 72 (211)
T COG0352 24 LEWVEAALKG------GVTAVQLREKDLSDEEYLALAEKLRALCQKYGVPLIIND 72 (211)
T ss_pred HHHHHHHHhC------CCeEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEecC
Confidence 6778888754 2344444333332222 3556789999999999999986
Done!