Query psy14299
Match_columns 448
No_of_seqs 219 out of 1577
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 16:17:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14299.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14299hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vp6_A Glutamate decarboxylase 100.0 2.7E-45 9.4E-50 385.7 37.0 350 3-437 155-506 (511)
2 4e1o_A HDC, histidine decarbox 100.0 7.6E-44 2.6E-48 372.0 32.2 328 3-436 146-478 (481)
3 3k40_A Aromatic-L-amino-acid d 100.0 5E-44 1.7E-48 372.8 30.3 328 3-437 140-472 (475)
4 2okj_A Glutamate decarboxylase 100.0 6.9E-42 2.4E-46 359.0 36.8 349 3-436 152-502 (504)
5 2jis_A Cysteine sulfinic acid 100.0 2.5E-41 8.6E-46 355.8 36.7 348 3-435 166-514 (515)
6 1js3_A DDC;, DOPA decarboxylas 100.0 6.2E-40 2.1E-44 342.4 33.3 333 3-439 140-477 (486)
7 2qma_A Diaminobutyrate-pyruvat 100.0 5.3E-39 1.8E-43 336.5 34.0 331 3-435 159-495 (497)
8 2dgk_A GAD-beta, GADB, glutama 100.0 8.9E-34 3E-38 293.2 30.5 314 4-438 105-436 (452)
9 3hbx_A GAD 1, glutamate decarb 100.0 1.4E-33 4.8E-38 295.9 31.2 317 3-438 118-446 (502)
10 2z67_A O-phosphoseryl-tRNA(SEC 100.0 7.8E-29 2.7E-33 256.7 23.4 288 5-433 152-455 (456)
11 3mad_A Sphingosine-1-phosphate 100.0 2.2E-28 7.6E-33 256.8 26.2 302 4-438 162-471 (514)
12 3mc6_A Sphingosine-1-phosphate 100.0 1.1E-28 3.9E-33 257.7 21.0 301 3-437 127-438 (497)
13 3f9t_A TDC, L-tyrosine decarbo 100.0 5E-27 1.7E-31 235.8 28.6 300 4-434 88-396 (397)
14 3bc8_A O-phosphoseryl-tRNA(SEC 100.0 1.9E-27 6.5E-32 243.1 22.5 203 3-241 117-322 (450)
15 4hvk_A Probable cysteine desul 99.9 6.9E-26 2.4E-30 226.3 28.3 292 4-439 62-376 (382)
16 3nnk_A Ureidoglycine-glyoxylat 99.9 8.9E-26 3E-30 228.7 27.4 316 5-437 67-391 (411)
17 3e9k_A Kynureninase; kynurenin 99.9 1.9E-25 6.6E-30 231.2 30.5 309 4-436 130-461 (465)
18 2dr1_A PH1308 protein, 386AA l 99.9 6E-25 2E-29 220.5 32.1 301 4-438 73-381 (386)
19 3zrp_A Serine-pyruvate aminotr 99.9 7.4E-26 2.5E-30 226.7 23.9 300 4-437 56-364 (384)
20 1t3i_A Probable cysteine desul 99.9 5.1E-25 1.7E-29 223.5 29.8 302 4-437 92-414 (420)
21 4eb5_A Probable cysteine desul 99.9 2.9E-25 9.7E-30 222.5 27.2 291 4-438 62-375 (382)
22 1kmj_A Selenocysteine lyase; p 99.9 6.2E-25 2.1E-29 221.7 29.2 304 4-436 87-405 (406)
23 1m32_A 2-aminoethylphosphonate 99.9 4.5E-25 1.5E-29 219.4 27.6 300 4-435 58-364 (366)
24 3isl_A Purine catabolism prote 99.9 2.7E-25 9.2E-30 225.5 24.4 316 6-437 66-391 (416)
25 2z9v_A Aspartate aminotransfer 99.9 1.5E-24 5E-29 218.5 27.9 301 4-437 61-372 (392)
26 1iug_A Putative aspartate amin 99.9 8.1E-25 2.8E-29 216.8 24.0 291 4-436 53-348 (352)
27 3ffr_A Phosphoserine aminotran 99.9 3E-25 1E-29 220.5 20.7 292 4-433 63-361 (362)
28 3e77_A Phosphoserine aminotran 99.9 1.7E-25 5.9E-30 225.5 18.6 292 4-435 78-374 (377)
29 2huf_A Alanine glyoxylate amin 99.9 1.3E-24 4.6E-29 218.9 25.0 304 4-437 72-384 (393)
30 2yrr_A Aminotransferase, class 99.9 1.1E-24 3.9E-29 215.3 23.8 293 4-434 54-351 (353)
31 3lvm_A Cysteine desulfurase; s 99.9 6.8E-24 2.3E-28 216.0 29.8 292 4-438 87-401 (423)
32 3f0h_A Aminotransferase; RER07 99.9 3.1E-24 1E-28 215.0 26.4 293 6-434 75-372 (376)
33 3kgw_A Alanine-glyoxylate amin 99.9 1.6E-24 5.5E-29 217.6 23.9 307 4-437 76-389 (393)
34 1elu_A L-cysteine/L-cystine C- 99.9 5.9E-24 2E-28 213.5 27.8 297 4-432 78-388 (390)
35 3ke3_A Putative serine-pyruvat 99.9 2.3E-24 7.8E-29 217.5 24.2 304 4-437 53-377 (379)
36 1eg5_A Aminotransferase; PLP-d 99.9 1.6E-23 5.6E-28 209.6 30.2 290 4-437 63-377 (384)
37 1vjo_A Alanine--glyoxylate ami 99.9 4.6E-24 1.6E-28 215.1 24.6 296 4-433 87-392 (393)
38 1wyu_B Glycine dehydrogenase s 99.9 1.1E-23 3.8E-28 219.0 27.2 310 3-435 124-440 (474)
39 2ch1_A 3-hydroxykynurenine tra 99.9 7.7E-24 2.6E-28 213.5 25.3 304 4-437 71-384 (396)
40 2bkw_A Alanine-glyoxylate amin 99.9 5.3E-24 1.8E-28 213.5 23.4 305 4-435 61-383 (385)
41 3cai_A Possible aminotransfera 99.9 1.6E-23 5.4E-28 212.1 27.0 289 4-432 88-405 (406)
42 3hl2_A O-phosphoseryl-tRNA(SEC 99.9 7.6E-24 2.6E-28 214.2 23.5 204 3-243 135-342 (501)
43 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 4E-24 1.4E-28 213.5 20.6 153 4-180 71-225 (371)
44 3m5u_A Phosphoserine aminotran 99.9 3.6E-24 1.2E-28 215.0 19.8 280 4-435 70-359 (361)
45 3vax_A Putative uncharacterize 99.9 3E-24 1E-28 216.8 18.2 151 4-181 82-237 (400)
46 3qm2_A Phosphoserine aminotran 99.9 2.4E-24 8.3E-29 218.1 17.5 283 4-435 92-384 (386)
47 1v72_A Aldolase; PLP-dependent 99.9 1.1E-23 3.8E-28 208.9 20.1 282 4-435 61-352 (356)
48 3tqx_A 2-amino-3-ketobutyrate 99.9 6.8E-23 2.3E-27 206.6 24.8 289 4-436 105-396 (399)
49 1qz9_A Kynureninase; kynurenin 99.9 4.9E-22 1.7E-26 201.8 31.3 295 4-436 90-402 (416)
50 2vyc_A Biodegradative arginine 99.9 3.5E-23 1.2E-27 226.2 23.6 302 4-437 223-606 (755)
51 3dzz_A Putative pyridoxal 5'-p 99.9 1.5E-22 5.2E-27 203.4 25.2 289 4-436 87-389 (391)
52 2w8t_A SPT, serine palmitoyltr 99.9 1.1E-21 3.7E-26 201.0 31.1 287 4-437 126-416 (427)
53 1svv_A Threonine aldolase; str 99.9 1.6E-22 5.6E-27 200.5 24.1 280 4-435 68-357 (359)
54 2fnu_A Aminotransferase; prote 99.9 1.4E-22 4.9E-27 202.5 23.6 300 4-437 49-373 (375)
55 1wyu_A Glycine dehydrogenase ( 99.9 2.1E-22 7.3E-27 207.0 23.2 296 5-432 128-436 (438)
56 1fc4_A 2-amino-3-ketobutyrate 99.9 1.5E-21 5E-26 197.5 25.8 288 4-436 107-397 (401)
57 3nra_A Aspartate aminotransfer 99.9 9.7E-22 3.3E-26 198.8 23.8 287 4-436 104-405 (407)
58 3a2b_A Serine palmitoyltransfe 99.9 2.4E-21 8.2E-26 195.9 26.5 286 4-437 105-393 (398)
59 1rv3_A Serine hydroxymethyltra 99.9 3.1E-22 1.1E-26 208.7 19.9 298 6-435 114-430 (483)
60 1xi9_A Putative transaminase; 99.9 1.9E-21 6.5E-26 197.4 25.2 284 4-436 103-403 (406)
61 1j32_A Aspartate aminotransfer 99.9 2.2E-21 7.5E-26 195.3 24.9 282 4-435 92-386 (388)
62 2x3l_A ORN/Lys/Arg decarboxyla 99.9 1.6E-22 5.6E-27 208.7 16.9 274 4-436 74-353 (446)
63 1c4k_A Protein (ornithine deca 99.9 4.3E-22 1.5E-26 216.2 20.9 311 4-437 191-567 (730)
64 3a9z_A Selenocysteine lyase; P 99.9 2.6E-21 8.9E-26 197.7 25.5 160 4-180 80-261 (432)
65 3uwc_A Nucleotide-sugar aminot 99.9 5.7E-22 1.9E-26 198.5 20.1 289 4-435 55-370 (374)
66 1bs0_A Protein (8-amino-7-oxon 99.9 6.5E-21 2.2E-25 191.6 26.6 280 4-432 101-383 (384)
67 2bwn_A 5-aminolevulinate synth 99.9 7E-21 2.4E-25 192.6 26.3 287 6-436 110-400 (401)
68 3kki_A CAI-1 autoinducer synth 99.9 1.2E-20 4.2E-25 191.6 28.1 280 5-436 122-404 (409)
69 3ffh_A Histidinol-phosphate am 99.9 2E-20 6.7E-25 186.6 28.7 273 4-432 86-362 (363)
70 3euc_A Histidinol-phosphate am 99.9 3.1E-21 1.1E-25 192.7 22.5 274 4-433 87-365 (367)
71 3frk_A QDTB; aminotransferase, 99.9 7.4E-22 2.5E-26 198.0 17.5 149 4-182 53-204 (373)
72 3l8a_A METC, putative aminotra 99.9 5.2E-21 1.8E-25 195.3 23.6 288 4-434 121-420 (421)
73 4dq6_A Putative pyridoxal phos 99.9 6.2E-21 2.1E-25 191.7 23.3 284 4-433 92-390 (391)
74 2gb3_A Aspartate aminotransfer 99.9 3.9E-21 1.3E-25 195.4 22.0 284 4-437 104-403 (409)
75 3kax_A Aminotransferase, class 99.9 9.8E-21 3.4E-25 189.7 23.9 285 4-433 84-382 (383)
76 1b9h_A AHBA synthase, protein 99.9 2E-20 7E-25 188.3 26.2 149 5-182 56-205 (388)
77 2zc0_A Alanine glyoxylate tran 99.9 1.5E-20 5.1E-25 190.4 24.5 292 4-436 100-404 (407)
78 1c7n_A Cystalysin; transferase 99.9 1.1E-20 3.8E-25 190.8 23.4 291 4-438 91-395 (399)
79 3fdb_A Beta C-S lyase, putativ 99.9 1.3E-20 4.6E-25 188.5 23.7 284 4-435 83-375 (377)
80 1v2d_A Glutamine aminotransfer 99.9 5.4E-21 1.9E-25 192.1 20.8 282 4-438 80-373 (381)
81 3piu_A 1-aminocyclopropane-1-c 99.9 2E-20 6.8E-25 191.7 25.2 302 4-437 113-433 (435)
82 1bw0_A TAT, protein (tyrosine 99.9 1.1E-20 3.9E-25 192.0 23.1 294 4-436 106-413 (416)
83 3dr4_A Putative perosamine syn 99.9 5.3E-21 1.8E-25 193.0 20.5 150 4-182 73-223 (391)
84 3g0t_A Putative aminotransfera 99.9 1.5E-20 5.1E-25 192.2 24.0 304 4-434 107-435 (437)
85 2a7v_A Serine hydroxymethyltra 99.9 1.5E-20 5.1E-25 195.7 24.2 301 6-435 124-440 (490)
86 3ly1_A Putative histidinol-pho 99.9 2.9E-20 9.8E-25 184.6 25.0 277 4-435 70-351 (354)
87 2c0r_A PSAT, phosphoserine ami 99.9 7.7E-21 2.6E-25 189.6 20.9 278 5-435 71-360 (362)
88 3dyd_A Tyrosine aminotransfera 99.9 2.7E-20 9.3E-25 190.5 25.0 293 4-436 120-424 (427)
89 1iay_A ACC synthase 2, 1-amino 99.9 4.1E-20 1.4E-24 188.8 26.1 298 4-435 110-426 (428)
90 2oga_A Transaminase; PLP-depen 99.9 2.4E-20 8.4E-25 189.0 24.2 150 4-183 80-232 (399)
91 1gd9_A Aspartate aminotransfer 99.9 2.2E-20 7.6E-25 188.0 23.3 285 5-435 90-385 (389)
92 1d2f_A MALY protein; aminotran 99.9 6.8E-20 2.3E-24 184.6 26.6 287 4-435 89-388 (390)
93 2c81_A Glutamine-2-deoxy-scyll 99.9 3.6E-20 1.2E-24 188.8 24.7 150 4-182 59-209 (418)
94 2dkj_A Serine hydroxymethyltra 99.9 8E-21 2.8E-25 192.1 19.5 284 6-435 89-387 (407)
95 3ftb_A Histidinol-phosphate am 99.9 4.8E-20 1.6E-24 183.3 24.7 275 4-435 80-360 (361)
96 2vi8_A Serine hydroxymethyltra 99.9 2.2E-20 7.7E-25 188.7 22.5 287 6-437 89-388 (405)
97 3get_A Histidinol-phosphate am 99.9 5.7E-20 2E-24 183.4 25.1 271 4-433 84-364 (365)
98 3op7_A Aminotransferase class 99.9 4.8E-20 1.6E-24 184.6 23.4 283 4-437 83-372 (375)
99 2cb1_A O-acetyl homoserine sul 99.9 6.7E-20 2.3E-24 186.9 24.5 143 4-181 73-220 (412)
100 3h14_A Aminotransferase, class 99.9 6E-20 2E-24 185.1 23.6 284 4-439 93-385 (391)
101 1jg8_A L-ALLO-threonine aldola 99.9 1E-20 3.5E-25 187.4 17.7 157 4-183 55-220 (347)
102 1o4s_A Aspartate aminotransfer 99.9 5.4E-20 1.9E-24 185.7 23.0 276 4-434 103-387 (389)
103 2z61_A Probable aspartate amin 99.9 1.9E-20 6.5E-25 187.4 19.3 275 4-434 91-369 (370)
104 3cq5_A Histidinol-phosphate am 99.8 4.1E-19 1.4E-23 177.8 28.5 272 4-434 94-366 (369)
105 2o0r_A RV0858C (N-succinyldiam 99.8 1.5E-20 5.3E-25 191.0 18.3 285 4-436 88-396 (411)
106 1u08_A Hypothetical aminotrans 99.8 4.9E-20 1.7E-24 185.4 21.6 279 4-431 93-385 (386)
107 1o69_A Aminotransferase; struc 99.8 1.8E-19 6.2E-24 182.4 25.8 156 4-185 49-204 (394)
108 2x5d_A Probable aminotransfera 99.8 6.4E-20 2.2E-24 186.5 22.5 290 4-437 101-399 (412)
109 3ecd_A Serine hydroxymethyltra 99.8 8.6E-20 2.9E-24 185.4 23.2 289 6-436 98-397 (425)
110 2dou_A Probable N-succinyldiam 99.8 1.5E-19 5.1E-24 181.2 24.4 280 4-432 89-374 (376)
111 2zyj_A Alpha-aminodipate amino 99.8 2.2E-19 7.7E-24 181.4 25.8 289 4-437 93-394 (397)
112 3n0l_A Serine hydroxymethyltra 99.8 6.9E-20 2.4E-24 185.8 21.7 289 6-436 91-389 (417)
113 1mdo_A ARNB aminotransferase; 99.8 8.1E-20 2.8E-24 184.0 21.9 149 4-184 56-207 (393)
114 1vp4_A Aminotransferase, putat 99.8 1.6E-19 5.4E-24 184.6 23.8 294 4-439 111-421 (425)
115 3gbx_A Serine hydroxymethyltra 99.8 9.1E-20 3.1E-24 184.9 21.4 284 6-436 96-396 (420)
116 2o1b_A Aminotransferase, class 99.8 5.5E-20 1.9E-24 186.8 19.8 284 4-435 111-402 (404)
117 1lc5_A COBD, L-threonine-O-3-p 99.8 5.7E-19 1.9E-23 176.3 26.7 278 4-436 78-360 (364)
118 3b8x_A WBDK, pyridoxamine 5-ph 99.8 5.4E-19 1.9E-23 178.3 26.7 154 4-182 51-207 (390)
119 1yiz_A Kynurenine aminotransfe 99.8 8.4E-20 2.9E-24 186.4 20.9 152 4-179 103-271 (429)
120 3aow_A Putative uncharacterize 99.8 8.2E-19 2.8E-23 181.0 27.2 292 4-436 142-445 (448)
121 1fg7_A Histidinol phosphate am 99.8 8.7E-19 3E-23 174.9 26.4 272 4-432 77-354 (356)
122 1w23_A Phosphoserine aminotran 99.8 2.1E-20 7.3E-25 185.8 14.2 283 4-434 68-358 (360)
123 1b5p_A Protein (aspartate amin 99.8 1.8E-19 6.2E-24 181.6 21.2 150 4-179 93-250 (385)
124 2fyf_A PSAT, phosphoserine ami 99.8 9.7E-20 3.3E-24 184.4 19.0 285 4-435 98-397 (398)
125 1pff_A Methionine gamma-lyase; 99.8 1.4E-19 4.7E-24 178.3 19.4 147 4-185 15-168 (331)
126 3tcm_A Alanine aminotransferas 99.8 4.9E-19 1.7E-23 185.2 24.4 158 4-177 159-332 (500)
127 2x5f_A Aspartate_tyrosine_phen 99.8 8.3E-19 2.8E-23 179.2 24.7 153 5-177 116-285 (430)
128 1cs1_A CGS, protein (cystathio 99.8 1.7E-18 5.8E-23 174.6 26.7 144 4-182 69-218 (386)
129 3ele_A Amino transferase; RER0 99.8 1.2E-18 4E-23 175.9 25.5 153 4-180 101-265 (398)
130 2po3_A 4-dehydrase; external a 99.8 1.5E-18 5.2E-23 177.2 26.4 148 4-184 69-219 (424)
131 3nyt_A Aminotransferase WBPE; 99.8 8.9E-20 3E-24 182.7 16.3 150 4-183 52-204 (367)
132 3qhx_A Cystathionine gamma-syn 99.8 7.4E-19 2.5E-23 178.2 22.7 145 4-183 83-233 (392)
133 1gc0_A Methionine gamma-lyase; 99.8 1.8E-18 6E-23 175.5 25.4 142 4-180 82-229 (398)
134 3hdo_A Histidinol-phosphate am 99.8 5.3E-19 1.8E-23 176.3 20.2 270 4-435 84-354 (360)
135 2rfv_A Methionine gamma-lyase; 99.8 2.1E-18 7.3E-23 174.7 24.8 142 4-180 81-228 (398)
136 3h7f_A Serine hydroxymethyltra 99.8 5.8E-19 2E-23 181.9 20.1 287 6-436 111-414 (447)
137 1vef_A Acetylornithine/acetyl- 99.8 4.1E-18 1.4E-22 171.9 25.4 151 4-180 106-270 (395)
138 3n75_A LDC, lysine decarboxyla 99.8 8.1E-19 2.8E-23 189.3 21.3 153 6-180 215-383 (715)
139 1ax4_A Tryptophanase; tryptoph 99.8 2.3E-18 7.7E-23 177.8 23.7 164 4-184 93-286 (467)
140 3ruy_A Ornithine aminotransfer 99.8 5.8E-18 2E-22 170.6 25.1 280 4-433 95-391 (392)
141 2r2n_A Kynurenine/alpha-aminoa 99.8 1.4E-17 4.9E-22 170.1 28.1 157 4-180 110-279 (425)
142 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 5.7E-18 1.9E-22 173.8 24.5 156 4-181 79-235 (437)
143 3fvs_A Kynurenine--oxoglutarat 99.8 2.1E-18 7.2E-23 175.4 21.0 153 4-179 93-263 (422)
144 3p1t_A Putative histidinol-pho 99.8 7.7E-18 2.6E-22 165.7 24.1 265 4-434 70-335 (337)
145 3ez1_A Aminotransferase MOCR f 99.8 1.5E-17 5.1E-22 169.4 26.8 160 4-179 89-268 (423)
146 1e5e_A MGL, methionine gamma-l 99.8 2.2E-17 7.6E-22 167.9 27.8 142 4-180 79-227 (404)
147 2ctz_A O-acetyl-L-homoserine s 99.8 6.3E-18 2.2E-22 172.9 23.3 140 4-178 75-221 (421)
148 3ju7_A Putative PLP-dependent 99.8 4.6E-18 1.6E-22 171.6 21.6 152 4-182 55-208 (377)
149 2ord_A Acoat, acetylornithine 99.8 2.6E-17 8.8E-22 166.2 27.1 156 4-180 99-268 (397)
150 3ezs_A Aminotransferase ASPB; 99.8 2.5E-18 8.5E-23 172.0 19.2 151 4-178 84-246 (376)
151 3pj0_A LMO0305 protein; struct 99.8 3.2E-18 1.1E-22 170.1 19.8 154 5-185 66-227 (359)
152 3lws_A Aromatic amino acid bet 99.8 3.5E-18 1.2E-22 169.9 20.0 152 5-185 65-225 (357)
153 3ppl_A Aspartate aminotransfer 99.8 2E-17 6.9E-22 168.9 25.6 163 4-179 97-275 (427)
154 3jtx_A Aminotransferase; NP_28 99.8 7E-18 2.4E-22 169.9 21.7 156 4-177 93-259 (396)
155 2ez2_A Beta-tyrosinase, tyrosi 99.8 7.8E-18 2.7E-22 173.3 22.2 157 4-184 92-276 (456)
156 3e2y_A Kynurenine-oxoglutarate 99.8 5.2E-18 1.8E-22 171.7 20.4 153 4-179 87-256 (410)
157 2eh6_A Acoat, acetylornithine 99.8 4.6E-17 1.6E-21 162.7 26.6 154 4-180 88-257 (375)
158 3qgu_A LL-diaminopimelate amin 99.8 6E-18 2E-22 173.8 20.5 289 4-435 134-439 (449)
159 3b46_A Aminotransferase BNA3; 99.8 1.9E-18 6.7E-23 177.9 16.3 156 4-182 120-293 (447)
160 3cog_A Cystathionine gamma-lya 99.8 3.5E-18 1.2E-22 173.9 17.3 144 4-183 84-234 (403)
161 1qgn_A Protein (cystathionine 99.8 2.2E-17 7.6E-22 170.1 23.2 141 4-179 131-278 (445)
162 2pb2_A Acetylornithine/succiny 99.8 6.1E-17 2.1E-21 165.4 26.1 286 4-436 116-418 (420)
163 3ihj_A Alanine aminotransferas 99.8 1.7E-17 5.9E-22 173.4 22.0 160 4-177 155-331 (498)
164 1s0a_A Adenosylmethionine-8-am 99.8 1.2E-16 4.1E-21 163.2 27.8 292 4-435 105-423 (429)
165 1sff_A 4-aminobutyrate aminotr 99.8 1.7E-16 5.7E-21 161.6 28.3 161 4-180 104-284 (426)
166 3fkd_A L-threonine-O-3-phospha 99.8 6.2E-17 2.1E-21 160.5 23.7 269 4-435 69-341 (350)
167 3acz_A Methionine gamma-lyase; 99.8 4.7E-17 1.6E-21 164.6 23.2 141 4-179 76-222 (389)
168 3ri6_A O-acetylhomoserine sulf 99.8 8E-17 2.7E-21 165.3 25.0 138 5-177 100-243 (430)
169 2fq6_A Cystathionine beta-lyas 99.8 1.2E-17 4.2E-22 170.6 18.7 142 4-180 99-248 (415)
170 3rq1_A Aminotransferase class 99.8 8.9E-17 3E-21 163.4 24.3 154 4-177 104-276 (418)
171 4adb_A Succinylornithine trans 99.8 2.1E-16 7.2E-21 159.6 26.7 288 4-437 98-401 (406)
172 3if2_A Aminotransferase; YP_26 99.8 3.5E-17 1.2E-21 167.7 20.8 166 4-178 108-290 (444)
173 1n8p_A Cystathionine gamma-lya 99.7 2.1E-17 7.3E-22 167.5 18.2 144 4-184 72-225 (393)
174 2oqx_A Tryptophanase; lyase, p 99.7 3.2E-17 1.1E-21 169.1 19.8 164 4-180 91-281 (467)
175 3d6k_A Putative aminotransfera 99.7 2.3E-16 7.9E-21 161.0 25.0 161 4-179 95-273 (422)
176 3nx3_A Acoat, acetylornithine 99.7 4.6E-16 1.6E-20 156.9 26.6 157 4-180 95-264 (395)
177 3ndn_A O-succinylhomoserine su 99.7 7.6E-17 2.6E-21 164.7 21.0 142 4-180 98-245 (414)
178 1z7d_A Ornithine aminotransfer 99.7 6.3E-16 2.2E-20 158.6 27.6 159 4-179 124-297 (433)
179 3asa_A LL-diaminopimelate amin 99.7 1.4E-16 4.6E-21 161.3 22.2 288 4-436 97-393 (400)
180 3ei9_A LL-diaminopimelate amin 99.7 8.7E-17 3E-21 164.3 20.4 284 4-434 121-426 (432)
181 1ibj_A CBL, cystathionine beta 99.7 1.8E-17 6.2E-22 171.7 15.2 143 4-182 150-298 (464)
182 3g7q_A Valine-pyruvate aminotr 99.7 2.4E-16 8.2E-21 159.8 23.1 156 4-178 100-264 (417)
183 3f6t_A Aspartate aminotransfer 99.7 1.4E-16 4.7E-21 168.0 21.9 159 4-185 166-335 (533)
184 2eo5_A 419AA long hypothetical 99.7 8.7E-16 3E-20 156.6 26.9 161 4-180 106-298 (419)
185 2oat_A Ornithine aminotransfer 99.7 5.8E-16 2E-20 159.2 25.0 161 4-180 135-309 (439)
186 3n5m_A Adenosylmethionine-8-am 99.7 5.3E-15 1.8E-19 152.2 32.1 165 5-180 110-301 (452)
187 2aeu_A Hypothetical protein MJ 99.7 9.3E-17 3.2E-21 161.7 18.4 139 4-179 78-222 (374)
188 3t18_A Aminotransferase class 99.7 3.7E-16 1.3E-20 158.6 22.8 154 4-177 103-275 (413)
189 1ajs_A Aspartate aminotransfer 99.7 4.6E-17 1.6E-21 165.1 16.1 155 4-177 99-272 (412)
190 3b1d_A Betac-S lyase; HET: PLP 99.6 3.1E-19 1.1E-23 180.2 0.0 157 4-183 91-258 (392)
191 3i4j_A Aminotransferase, class 99.7 1E-15 3.6E-20 156.3 26.3 171 4-185 91-282 (430)
192 3dxv_A Alpha-amino-epsilon-cap 99.7 9.6E-16 3.3E-20 157.0 25.9 161 4-180 106-286 (439)
193 3fsl_A Aromatic-amino-acid ami 99.7 4.2E-17 1.4E-21 164.3 15.2 156 4-177 97-261 (397)
194 1uu1_A Histidinol-phosphate am 99.7 2.8E-16 9.5E-21 155.1 20.5 140 4-179 78-218 (335)
195 1yaa_A Aspartate aminotransfer 99.7 4.2E-17 1.4E-21 165.5 13.9 154 4-176 98-267 (412)
196 4f4e_A Aromatic-amino-acid ami 99.7 7E-17 2.4E-21 164.6 15.0 156 4-177 119-283 (420)
197 3a8u_X Omega-amino acid--pyruv 99.7 6.1E-15 2.1E-19 151.5 29.5 170 4-185 112-309 (449)
198 2ay1_A Aroat, aromatic amino a 99.7 6.7E-17 2.3E-21 162.8 13.4 156 4-177 91-257 (394)
199 3tfu_A Adenosylmethionine-8-am 99.7 6.9E-15 2.4E-19 152.0 27.8 166 4-180 137-320 (457)
200 2cjg_A L-lysine-epsilon aminot 99.7 1.7E-15 5.8E-20 156.1 22.9 166 4-179 121-311 (449)
201 3gju_A Putative aminotransfera 99.7 3.1E-14 1.1E-18 147.0 32.3 167 4-180 114-307 (460)
202 3meb_A Aspartate aminotransfer 99.7 8.2E-16 2.8E-20 158.4 19.5 154 4-175 119-289 (448)
203 3dod_A Adenosylmethionine-8-am 99.7 2.5E-14 8.5E-19 147.1 30.3 166 4-180 106-297 (448)
204 1zod_A DGD, 2,2-dialkylglycine 99.7 4.7E-15 1.6E-19 151.4 24.6 160 4-179 104-287 (433)
205 2q7w_A Aspartate aminotransfer 99.7 4.7E-16 1.6E-20 156.5 15.4 154 5-177 95-260 (396)
206 3nmy_A Xometc, cystathionine g 99.7 5.7E-15 1.9E-19 150.1 23.4 143 4-182 84-234 (400)
207 7aat_A Aspartate aminotransfer 99.7 5.1E-16 1.7E-20 156.8 14.9 156 5-177 97-264 (401)
208 4a6r_A Omega transaminase; tra 99.7 3.9E-14 1.3E-18 146.2 29.2 166 4-180 113-305 (459)
209 3l44_A Glutamate-1-semialdehyd 99.7 4.6E-15 1.6E-19 151.7 21.8 153 4-179 113-285 (434)
210 3hmu_A Aminotransferase, class 99.7 5.6E-14 1.9E-18 145.8 29.7 167 4-180 118-309 (472)
211 3k28_A Glutamate-1-semialdehyd 99.7 4.9E-15 1.7E-19 151.4 20.5 153 4-179 111-283 (429)
212 1ohv_A 4-aminobutyrate aminotr 99.6 4.2E-14 1.4E-18 146.7 27.4 134 4-137 129-303 (472)
213 3jzl_A Putative cystathionine 99.6 3E-15 1E-19 152.5 18.2 149 8-186 83-250 (409)
214 3oks_A 4-aminobutyrate transam 99.6 9.3E-14 3.2E-18 143.1 29.2 162 4-180 124-312 (451)
215 4ffc_A 4-aminobutyrate aminotr 99.6 1.1E-13 3.7E-18 142.8 29.6 163 4-180 127-310 (453)
216 3i5t_A Aminotransferase; pyrid 99.6 1.5E-13 5.2E-18 142.6 29.7 167 4-180 116-308 (476)
217 3i16_A Aluminum resistance pro 99.6 9.3E-15 3.2E-19 149.6 19.8 150 8-185 97-266 (427)
218 4eu1_A Mitochondrial aspartate 99.6 6.3E-15 2.2E-19 149.4 17.4 159 6-181 108-278 (409)
219 4e77_A Glutamate-1-semialdehyd 99.6 1.3E-13 4.3E-18 140.8 25.4 153 4-179 111-283 (429)
220 3fq8_A Glutamate-1-semialdehyd 99.6 3.5E-14 1.2E-18 144.7 20.8 153 4-179 110-282 (427)
221 3hvy_A Cystathionine beta-lyas 99.6 2.1E-14 7E-19 147.0 18.9 148 8-185 98-266 (427)
222 2zy4_A L-aspartate beta-decarb 99.6 6.6E-14 2.3E-18 147.8 22.0 161 4-184 167-336 (546)
223 2epj_A Glutamate-1-semialdehyd 99.6 3.9E-14 1.3E-18 144.9 18.5 153 4-179 114-286 (434)
224 3bwn_A AT1G70560, L-tryptophan 99.6 5.3E-14 1.8E-18 142.2 19.2 139 4-182 93-236 (391)
225 2cy8_A D-phgat, D-phenylglycin 99.6 2.7E-13 9.3E-18 139.4 22.2 153 4-179 115-284 (453)
226 3ht4_A Aluminum resistance pro 99.6 4.1E-14 1.4E-18 145.1 15.8 147 8-185 89-255 (431)
227 3ou5_A Serine hydroxymethyltra 99.5 1.8E-12 6E-17 130.9 23.7 297 8-434 126-439 (490)
228 2e7u_A Glutamate-1-semialdehyd 99.5 4.7E-13 1.6E-17 136.4 17.3 152 4-179 110-281 (424)
229 4ao9_A Beta-phenylalanine amin 99.4 8.8E-12 3E-16 128.2 22.5 153 4-180 145-303 (454)
230 2hox_A ALLIIN lyase 1; cystein 99.4 1.4E-12 4.9E-17 133.4 16.2 146 4-184 125-272 (427)
231 3k7y_A Aspartate aminotransfer 99.4 1.6E-11 5.3E-16 124.9 21.6 154 4-177 99-263 (405)
232 4atq_A 4-aminobutyrate transam 99.3 8.3E-10 2.8E-14 113.7 30.2 162 5-180 128-311 (456)
233 4h51_A Aspartate aminotransfer 99.3 1E-10 3.5E-15 119.3 19.0 161 5-180 112-282 (420)
234 2yky_A Beta-transaminase; tran 98.9 6.4E-13 2.2E-17 137.3 0.0 152 4-180 158-316 (465)
235 4e3q_A Pyruvate transaminase; 99.2 3.3E-09 1.1E-13 109.7 26.9 167 4-180 130-322 (473)
236 4a0g_A Adenosylmethionine-8-am 99.0 7.9E-09 2.7E-13 113.8 20.0 171 4-180 444-681 (831)
237 4fgs_A Probable dehydrogenase 57.3 39 0.0013 31.4 8.7 92 3-113 29-120 (273)
238 2q5c_A NTRC family transcripti 56.8 52 0.0018 28.8 9.1 66 42-129 98-163 (196)
239 2pju_A Propionate catabolism o 56.8 72 0.0024 28.7 10.1 69 39-129 107-175 (225)
240 4g81_D Putative hexonate dehyd 50.1 64 0.0022 29.5 8.8 92 3-113 9-103 (255)
241 3io5_A Recombination and repai 47.9 1.9E+02 0.0066 27.6 11.9 85 40-131 59-167 (333)
242 1tks_A 3,4-dihydroxy-2-butanon 46.8 33 0.0011 30.5 5.9 64 67-130 129-193 (204)
243 2nly_A BH1492 protein, diverge 43.7 1.1E+02 0.0039 27.8 9.3 88 43-133 33-134 (245)
244 3grp_A 3-oxoacyl-(acyl carrier 43.7 1.2E+02 0.004 27.5 9.7 91 3-112 27-117 (266)
245 3rpc_A Possible metal-dependen 43.2 1.8E+02 0.0062 26.1 10.9 78 42-127 163-249 (264)
246 4gqr_A Pancreatic alpha-amylas 43.1 12 0.0004 37.4 2.8 30 105-134 69-98 (496)
247 3ie7_A LIN2199 protein; phosph 42.0 2.1E+02 0.0071 26.4 11.4 57 77-134 114-171 (320)
248 3l21_A DHDPS, dihydrodipicolin 40.8 27 0.00093 33.0 4.8 61 71-131 26-89 (304)
249 3fkr_A L-2-keto-3-deoxyarabona 40.7 26 0.00088 33.3 4.6 61 71-131 19-82 (309)
250 4dqx_A Probable oxidoreductase 39.1 1.3E+02 0.0044 27.4 9.2 91 3-112 27-117 (277)
251 3dz1_A Dihydrodipicolinate syn 38.9 29 0.001 32.9 4.7 61 71-131 19-81 (313)
252 3rwb_A TPLDH, pyridoxal 4-dehy 38.5 1.1E+02 0.0038 27.2 8.5 91 2-111 5-95 (247)
253 3s5o_A 4-hydroxy-2-oxoglutarat 38.4 33 0.0011 32.5 4.9 61 71-131 25-88 (307)
254 2wkj_A N-acetylneuraminate lya 37.3 34 0.0011 32.3 4.8 59 71-131 22-85 (303)
255 3flu_A DHDPS, dihydrodipicolin 37.2 29 0.001 32.6 4.4 61 71-131 18-81 (297)
256 3cpr_A Dihydrodipicolinate syn 36.9 36 0.0012 32.1 5.0 59 71-131 27-90 (304)
257 3l6e_A Oxidoreductase, short-c 36.8 1.1E+02 0.0037 27.0 8.1 92 1-111 1-92 (235)
258 1f6k_A N-acetylneuraminate lya 36.7 35 0.0012 32.0 4.8 61 71-131 14-78 (293)
259 3imf_A Short chain dehydrogena 36.5 1.7E+02 0.0058 26.0 9.5 93 2-110 5-97 (257)
260 1g94_A Alpha-amylase; beta-alp 35.7 17 0.0006 36.2 2.6 30 105-134 57-86 (448)
261 3qze_A DHDPS, dihydrodipicolin 35.2 31 0.0011 32.8 4.2 61 71-131 34-97 (314)
262 3tak_A DHDPS, dihydrodipicolin 34.8 31 0.0011 32.3 4.1 59 71-131 12-75 (291)
263 3gvc_A Oxidoreductase, probabl 34.8 1.4E+02 0.0047 27.2 8.7 89 4-111 30-118 (277)
264 4e6p_A Probable sorbitol dehyd 34.4 1.7E+02 0.0058 26.0 9.1 89 4-111 9-97 (259)
265 3bh4_A Alpha-amylase; calcium, 34.3 20 0.0007 36.0 2.9 30 105-134 71-100 (483)
266 1xky_A Dihydrodipicolinate syn 33.9 36 0.0012 32.1 4.4 58 71-131 23-86 (301)
267 1qys_A TOP7; alpha-beta, novel 33.5 1.2E+02 0.0041 22.3 6.1 48 373-437 28-75 (106)
268 2ojp_A DHDPS, dihydrodipicolin 33.3 34 0.0012 32.0 4.1 59 71-131 12-75 (292)
269 1ud2_A Amylase, alpha-amylase; 33.2 22 0.00076 35.7 3.0 30 105-134 73-102 (480)
270 4eso_A Putative oxidoreductase 33.2 1.4E+02 0.0049 26.6 8.4 89 4-111 9-97 (255)
271 2r8w_A AGR_C_1641P; APC7498, d 33.0 38 0.0013 32.5 4.5 61 71-131 45-108 (332)
272 3mio_A DHBP synthase, 3,4-dihy 33.0 1.3E+02 0.0043 26.7 7.4 65 66-130 127-193 (206)
273 1mxg_A Alpha amylase; hyperthe 32.9 23 0.00078 35.2 3.0 30 105-134 79-108 (435)
274 1hvx_A Alpha-amylase; hydrolas 32.7 23 0.00078 36.1 3.0 30 105-134 74-103 (515)
275 3rih_A Short chain dehydrogena 32.7 2.9E+02 0.0099 25.2 10.6 43 66-111 92-134 (293)
276 3lyl_A 3-oxoacyl-(acyl-carrier 32.6 1.7E+02 0.0058 25.7 8.7 90 3-111 5-97 (247)
277 1wpc_A Glucan 1,4-alpha-maltoh 32.4 23 0.00078 35.7 2.9 30 105-134 75-104 (485)
278 1lwj_A 4-alpha-glucanotransfer 32.0 24 0.00083 35.0 3.0 30 105-134 62-91 (441)
279 2v9d_A YAGE; dihydrodipicolini 32.0 41 0.0014 32.4 4.5 61 71-131 42-105 (343)
280 3h5d_A DHDPS, dihydrodipicolin 31.6 32 0.0011 32.6 3.7 61 71-131 18-81 (311)
281 3tfo_A Putative 3-oxoacyl-(acy 31.4 1.5E+02 0.0051 26.8 8.2 92 2-112 3-97 (264)
282 3vup_A Beta-1,4-mannanase; TIM 31.0 52 0.0018 30.2 5.0 23 111-133 88-110 (351)
283 4dpp_A DHDPS 2, dihydrodipicol 30.9 48 0.0016 32.2 4.8 59 71-131 70-133 (360)
284 3op4_A 3-oxoacyl-[acyl-carrier 30.7 1.7E+02 0.0057 26.0 8.3 90 3-111 9-98 (248)
285 2hmc_A AGR_L_411P, dihydrodipi 30.6 49 0.0017 31.9 4.8 61 71-131 37-97 (344)
286 1xp8_A RECA protein, recombina 30.6 2.3E+02 0.008 27.2 9.8 85 40-131 103-206 (366)
287 2guy_A Alpha-amylase A; (beta- 30.5 24 0.00081 35.5 2.6 31 104-134 89-119 (478)
288 4aie_A Glucan 1,6-alpha-glucos 30.4 27 0.00091 35.5 3.0 30 105-134 72-101 (549)
289 4ibo_A Gluconate dehydrogenase 30.1 1.8E+02 0.0062 26.3 8.6 42 66-110 76-117 (271)
290 2qv5_A AGR_C_5032P, uncharacte 30.1 3E+02 0.01 25.2 9.9 89 42-133 59-161 (261)
291 3b4u_A Dihydrodipicolinate syn 30.0 38 0.0013 31.8 3.8 55 71-125 14-68 (294)
292 1ht6_A AMY1, alpha-amylase iso 29.3 26 0.00088 34.4 2.6 28 107-134 63-90 (405)
293 3a5f_A Dihydrodipicolinate syn 28.9 48 0.0016 31.0 4.3 60 71-131 13-75 (291)
294 3dhu_A Alpha-amylase; structur 28.7 26 0.00091 34.8 2.6 29 106-134 77-105 (449)
295 3na8_A Putative dihydrodipicol 28.5 33 0.0011 32.6 3.1 61 71-131 35-98 (315)
296 2dh2_A 4F2 cell-surface antige 28.3 27 0.00092 34.6 2.6 30 105-134 74-103 (424)
297 3ghf_A Septum site-determining 28.3 1.4E+02 0.0049 23.8 6.5 48 79-130 26-78 (120)
298 1snn_A DHBP synthase, 3,4-dihy 28.2 1.5E+02 0.0053 26.6 7.2 64 66-130 147-211 (227)
299 1wza_A Alpha-amylase A; hydrol 28.1 27 0.00093 35.2 2.6 29 106-134 75-103 (488)
300 3sju_A Keto reductase; short-c 28.1 1.9E+02 0.0065 26.2 8.3 43 66-111 74-116 (279)
301 3h7a_A Short chain dehydrogena 28.1 1.8E+02 0.0062 25.8 8.1 88 4-111 8-98 (252)
302 1zco_A 2-dehydro-3-deoxyphosph 27.9 1.5E+02 0.005 27.2 7.4 61 78-139 141-205 (262)
303 1w3i_A EDA, 2-keto-3-deoxy glu 27.8 39 0.0013 31.7 3.5 52 71-125 10-64 (293)
304 1gcy_A Glucan 1,4-alpha-maltot 27.8 30 0.001 35.4 2.8 28 107-134 87-114 (527)
305 2z1k_A (NEO)pullulanase; hydro 27.7 26 0.00088 35.1 2.3 31 104-134 88-118 (475)
306 2nuw_A 2-keto-3-deoxygluconate 27.5 34 0.0012 32.0 3.0 52 71-125 10-64 (288)
307 3qfe_A Putative dihydrodipicol 27.5 38 0.0013 32.2 3.3 61 71-131 21-85 (318)
308 3si9_A DHDPS, dihydrodipicolin 27.3 35 0.0012 32.5 3.0 61 71-131 33-96 (315)
309 2aaa_A Alpha-amylase; glycosid 27.2 26 0.0009 35.2 2.3 32 103-134 88-119 (484)
310 1hxh_A 3BETA/17BETA-hydroxyste 27.2 3.2E+02 0.011 24.0 9.8 90 2-110 5-94 (253)
311 3is3_A 17BETA-hydroxysteroid d 27.1 2.1E+02 0.0072 25.6 8.5 43 66-111 69-111 (270)
312 1g57_A DHBP synthase, 3,4-dihy 27.0 1.2E+02 0.0041 27.1 6.3 63 67-130 137-200 (217)
313 3ff4_A Uncharacterized protein 26.9 70 0.0024 25.7 4.4 43 79-130 67-109 (122)
314 4fn4_A Short chain dehydrogena 26.6 1.7E+02 0.0058 26.6 7.6 86 2-106 6-94 (254)
315 3oid_A Enoyl-[acyl-carrier-pro 26.4 2.7E+02 0.0092 24.7 9.0 93 3-110 4-96 (258)
316 1jae_A Alpha-amylase; glycosid 26.1 25 0.00086 35.3 1.9 30 105-134 67-96 (471)
317 3tjr_A Short chain dehydrogena 25.8 1.8E+02 0.006 26.8 7.8 43 66-111 81-123 (301)
318 3e96_A Dihydrodipicolinate syn 25.8 39 0.0013 32.1 3.1 61 71-131 22-86 (316)
319 1vs1_A 3-deoxy-7-phosphoheptul 25.7 2.6E+02 0.009 25.8 8.7 61 78-139 156-220 (276)
320 2pcq_A Putative dihydrodipicol 25.7 22 0.00075 33.2 1.3 58 71-130 9-66 (283)
321 3pk0_A Short-chain dehydrogena 25.5 3.6E+02 0.012 23.9 9.7 93 3-111 10-103 (262)
322 3m1a_A Putative dehydrogenase; 25.2 3.6E+02 0.012 24.0 11.4 89 4-111 6-94 (281)
323 2wc7_A Alpha amylase, catalyti 25.1 28 0.00097 35.0 2.0 31 104-134 94-124 (488)
324 1zja_A Trehalulose synthase; s 25.0 33 0.0011 35.3 2.5 30 105-134 72-101 (557)
325 1j0h_A Neopullulanase; beta-al 25.0 33 0.0011 35.6 2.6 29 106-134 216-244 (588)
326 3edm_A Short chain dehydrogena 24.8 3.6E+02 0.012 23.8 10.0 89 3-107 8-97 (259)
327 1m53_A Isomaltulose synthase; 24.7 31 0.0011 35.6 2.3 29 106-134 86-114 (570)
328 3osu_A 3-oxoacyl-[acyl-carrier 24.7 3E+02 0.01 24.1 8.9 91 4-112 5-98 (246)
329 3ged_A Short-chain dehydrogena 24.6 2E+02 0.0067 26.0 7.6 46 66-114 48-93 (247)
330 3v2g_A 3-oxoacyl-[acyl-carrier 24.5 2.6E+02 0.009 25.1 8.6 42 66-110 82-123 (271)
331 3edf_A FSPCMD, cyclomaltodextr 24.2 40 0.0014 35.1 3.0 27 108-134 194-220 (601)
332 4dmm_A 3-oxoacyl-[acyl-carrier 24.1 2.7E+02 0.0094 24.9 8.6 42 66-110 79-120 (269)
333 3bc9_A AMYB, alpha amylase, ca 23.9 39 0.0013 35.2 2.9 29 106-134 202-230 (599)
334 1uok_A Oligo-1,6-glucosidase; 23.8 38 0.0013 34.8 2.8 30 105-134 71-100 (558)
335 3d0c_A Dihydrodipicolinate syn 23.8 45 0.0015 31.6 3.1 61 71-131 22-86 (314)
336 1wzl_A Alpha-amylase II; pullu 23.6 33 0.0011 35.5 2.3 29 106-134 213-241 (585)
337 1d3c_A Cyclodextrin glycosyltr 23.6 40 0.0014 35.7 3.0 30 105-134 108-137 (686)
338 1ua7_A Alpha-amylase; beta-alp 23.4 28 0.00096 34.4 1.6 30 105-134 67-96 (422)
339 3ijr_A Oxidoreductase, short c 23.3 4.2E+02 0.014 24.0 10.1 88 4-106 48-135 (291)
340 3sz8_A 2-dehydro-3-deoxyphosph 23.2 1E+02 0.0034 28.9 5.3 57 78-136 145-205 (285)
341 1qho_A Alpha-amylase; glycosid 23.2 41 0.0014 35.6 3.0 32 103-134 98-129 (686)
342 3m5v_A DHDPS, dihydrodipicolin 23.1 44 0.0015 31.5 2.8 58 74-131 21-82 (301)
343 4fc7_A Peroxisomal 2,4-dienoyl 23.1 3.1E+02 0.011 24.6 8.8 89 3-110 27-119 (277)
344 1ea9_C Cyclomaltodextrinase; h 23.1 36 0.0012 35.3 2.4 56 79-134 170-240 (583)
345 2yxg_A DHDPS, dihydrodipicolin 23.0 54 0.0019 30.6 3.5 58 71-131 12-74 (289)
346 4dyv_A Short-chain dehydrogena 22.9 2.9E+02 0.01 24.8 8.6 85 4-107 29-113 (272)
347 2ze0_A Alpha-glucosidase; TIM 22.9 41 0.0014 34.6 2.8 30 105-134 71-100 (555)
348 1cyg_A Cyclodextrin glucanotra 22.8 43 0.0015 35.4 3.0 30 105-134 104-133 (680)
349 3gk3_A Acetoacetyl-COA reducta 22.7 3.9E+02 0.013 23.7 9.4 43 66-111 76-118 (269)
350 4iin_A 3-ketoacyl-acyl carrier 22.7 3.1E+02 0.011 24.4 8.7 42 66-110 80-121 (271)
351 1v77_A PH1877P, hypothetical p 22.5 1.2E+02 0.0041 26.7 5.5 26 111-136 145-171 (212)
352 3n74_A 3-ketoacyl-(acyl-carrie 22.4 3.9E+02 0.013 23.4 11.1 86 3-107 9-94 (261)
353 3v8b_A Putative dehydrogenase, 22.3 3.5E+02 0.012 24.4 9.1 61 42-106 55-115 (283)
354 3kvo_A Hydroxysteroid dehydrog 22.2 4.2E+02 0.014 24.9 9.8 39 66-107 102-140 (346)
355 4aef_A Neopullulanase (alpha-a 22.2 43 0.0015 35.1 2.8 30 105-134 278-307 (645)
356 3eb2_A Putative dihydrodipicol 22.1 34 0.0012 32.3 1.8 61 71-131 15-78 (300)
357 3bmv_A Cyclomaltodextrin gluca 22.1 45 0.0015 35.3 3.0 30 105-134 109-138 (683)
358 2ehh_A DHDPS, dihydrodipicolin 21.9 58 0.002 30.4 3.4 57 71-131 12-74 (294)
359 3o38_A Short chain dehydrogena 21.9 3.6E+02 0.012 23.8 8.9 42 66-110 74-115 (266)
360 2zic_A Dextran glucosidase; TI 21.6 35 0.0012 34.9 2.0 29 106-134 72-100 (543)
361 1uls_A Putative 3-oxoacyl-acyl 21.3 2.3E+02 0.0078 24.9 7.3 32 79-110 60-91 (245)
362 4aee_A Alpha amylase, catalyti 21.3 40 0.0014 35.7 2.4 29 106-134 305-333 (696)
363 3aj7_A Oligo-1,6-glucosidase; 21.3 48 0.0017 34.3 3.0 29 106-134 81-109 (589)
364 1g5a_A Amylosucrase; glycosylt 21.3 45 0.0016 34.9 2.8 30 105-134 155-184 (628)
365 3kts_A Glycerol uptake operon 21.2 66 0.0022 28.3 3.4 49 79-138 18-68 (192)
366 3sc4_A Short chain dehydrogena 21.2 4.3E+02 0.015 23.7 9.4 92 3-112 9-109 (285)
367 3pgx_A Carveol dehydrogenase; 20.9 3.5E+02 0.012 24.1 8.7 42 66-110 78-119 (280)
368 3rkr_A Short chain oxidoreduct 20.6 3E+02 0.01 24.3 8.1 38 66-106 79-116 (262)
369 3r1i_A Short-chain type dehydr 20.5 2.3E+02 0.0078 25.6 7.3 42 66-110 82-123 (276)
370 3czg_A Sucrose hydrolase; (alp 20.4 46 0.0016 35.0 2.6 29 106-134 149-177 (644)
371 1x1t_A D(-)-3-hydroxybutyrate 20.4 4.4E+02 0.015 23.1 9.4 91 2-110 3-97 (260)
372 3nvt_A 3-deoxy-D-arabino-heptu 20.2 2.3E+02 0.0079 27.6 7.4 61 78-139 260-324 (385)
373 1o5k_A DHDPS, dihydrodipicolin 20.0 61 0.0021 30.5 3.2 60 71-131 24-86 (306)
374 2bhu_A Maltooligosyltrehalose 20.0 44 0.0015 34.8 2.3 29 106-134 186-214 (602)
No 1
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=2.7e-45 Score=385.66 Aligned_cols=350 Identities=52% Similarity=0.939 Sum_probs=293.8
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
.+++||+|||+||+.++.+++.+..++.++.|+...++++|+++..+|+|+.++++++|++..+++.+|+++++.+|+++
T Consensus 155 ~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~ 234 (511)
T 3vp6_A 155 GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPAD 234 (511)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHH
T ss_pred CceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCCCCccCHHH
Confidence 47899999999999999999987766767777765578899999999999999999999877679999999999999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
|+++|+++.+.+..|++|++++++|++|.++|+++|+++|++||+|+|||+||+++.+..+.++..+.+++.+|++++++
T Consensus 235 Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~ 314 (511)
T 3vp6_A 235 FEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNP 314 (511)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECT
T ss_pred HHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECc
Confidence 99999987777777999999999999999999999999999999999999999999998887777777777899999999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
|||+++|.|+|+++++++..+.......+.|+......+...+++..++++++|++.++++|++++.+|..|+.+
T Consensus 315 hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~----- 389 (511)
T 3vp6_A 315 HKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFEN----- 389 (511)
T ss_dssp TSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHH-----
T ss_pred ccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHH-----
Confidence 999999999999999998777776677888887665444555667777888888888877777777766555554
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 322 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 322 (448)
+.++
T Consensus 390 ----------------------------------------------------------------------------~~~~ 393 (511)
T 3vp6_A 390 ----------------------------------------------------------------------------QINK 393 (511)
T ss_dssp ----------------------------------------------------------------------------HHHH
T ss_pred ----------------------------------------------------------------------------HHHH
Confidence 5566
Q ss_pred HHHHHHHHHHHhhcCCCeEEecc--CCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCC
Q psy14299 323 AVDCSRYFLSQISQRPGFRLVIP--EFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQH 400 (448)
Q Consensus 323 ~~~l~~~~~~~L~~~pg~~l~~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g 400 (448)
..++++++++.|+++|||+++ . +|..++++|++.|.++++..........++..+.++.+.|.++|.+++.+....+
T Consensus 394 ~~~~a~~l~~~L~~~pg~~l~-~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~ 472 (511)
T 3vp6_A 394 CLELAEYLYAKIKNREEFEMV-FNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGD 472 (511)
T ss_dssp HHHHHHHHHHHHHSCTTEEES-SSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETT
T ss_pred HHHHHHHHHHHHhcCCCEEEE-ecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCC
Confidence 777899999999999999998 5 5788999999988776543333444556666778899999999977776544443
Q ss_pred cccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 401 RNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 401 ~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
. .+++|++++ |+.++++||++++++|+++++++.
T Consensus 473 ~--~~~lRi~~~-~~~~t~~di~~ll~~i~~~~~~~~ 506 (511)
T 3vp6_A 473 K--ANFFRMVIS-NPAATQSDIDFLIEEIERLGQDLH 506 (511)
T ss_dssp E--EEEEEECCC-CTTCCHHHHHHHHHHHHHHHC---
T ss_pred c--eEEEEEEec-CCCCCHHHHHHHHHHHHHHHHhhh
Confidence 2 258999998 799999999999999999987653
No 2
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.6e-44 Score=372.00 Aligned_cols=328 Identities=22% Similarity=0.340 Sum_probs=273.3
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCC-----CCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCC
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLS-----HLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQ 77 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~-----~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~ 77 (448)
.+|+||+|||+||++|+.++|++..++.+..|.. ..++++|+++..+|+|+.+++++.|. +++.+|++++++
T Consensus 146 ~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~---~~~~v~~~~~~~ 222 (481)
T 4e1o_A 146 GGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLV---KMKFLPVDDNFS 222 (481)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTC---EEEEECCCTTSC
T ss_pred CceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCC---ceEEEEcCCCCc
Confidence 4789999999999999999987643222221110 01578899999999999999999888 899999999999
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccE
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
+|+++|+++|+++.+.+..|++|++++++|++|.++|+++|+++|++||+|+|||+||+++.+..+..+....+++.+|+
T Consensus 223 ~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDs 302 (481)
T 4e1o_A 223 LRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADS 302 (481)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSE
T ss_pred CCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCE
Confidence 99999999999876666678899999999999999999999999999999999999999998877777766777778899
Q ss_pred EEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 158 VSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 158 ~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
+++++|||+++|.|+|+++++++..+...+...+.|+..... ...+++.+++++++|++.++++|++++.+|.+|+.+
T Consensus 303 i~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~ 380 (481)
T 4e1o_A 303 FTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANS--GVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQA 380 (481)
T ss_dssp EEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTT--TTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHH
T ss_pred EEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCccc--CCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHH
Confidence 999999999999999999999987766666667788865431 234566777888999988888888887776666555
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
T Consensus 381 -------------------------------------------------------------------------------- 380 (481)
T 4e1o_A 381 -------------------------------------------------------------------------------- 380 (481)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
+.++..++++++.+.|+++|||+++ .++..++++|++.+. +..+.++.++|.++|.+++.++.
T Consensus 381 -~~~~~~~~a~~l~~~L~~~~g~~~~-~~~~~~~v~f~~~~~---------------~~~~~~l~~~L~~~g~~~~~~~~ 443 (481)
T 4e1o_A 381 -HVRHGTEMAKYFESLVRNDPSFEIP-AKRHLGLVVFRLKGP---------------NSLTENVLKEIAKAGRLFLIPAT 443 (481)
T ss_dssp -HHHHHHHHHHHHHHHHHTCTTEECC-SCCCSSEEEEEESSC---------------HHHHHHHHHHHHHHCSSBCEEEE
T ss_pred -HHHHHHHHHHHHHHHHhcCCCeEEe-cCCceeEEEEEeCCc---------------hHHHHHHHHHHHhCCeEEEEeeE
Confidence 5556677899999999999999998 778889999986431 11345889999999977788888
Q ss_pred cCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 398 LQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 398 ~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
+.|. .++|++++ ++.+|++||++++++|+++.+++
T Consensus 444 ~~g~---~~lR~~~~-~~~tt~~di~~~~~~i~~~~~~l 478 (481)
T 4e1o_A 444 IQDK---LIIRFTVT-SQFTTRDDILRDWNLIRDAATLI 478 (481)
T ss_dssp ETTE---EEEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ECCE---EEEEEEeC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 8776 89999998 78899999999999999998764
No 3
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=5e-44 Score=372.81 Aligned_cols=328 Identities=23% Similarity=0.372 Sum_probs=254.3
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCC--C---CCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCC
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGL--S---HLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQ 77 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~--~---~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~ 77 (448)
.+|+||+|||+||++|+.++|.+..++.+..|- . ..++++|+++..+|+|+.+++++.|+ +++.||+++++
T Consensus 140 ~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~---~~~~v~~d~~~- 215 (475)
T 3k40_A 140 GGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGV---KLRSVQSENHR- 215 (475)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTC---EEEEECCBTTB-
T ss_pred CCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCC---ceEEEECCCCC-
Confidence 369999999999999999998764322221110 0 01457899999999999999999998 89999999999
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccE
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
+|+++|+++|+++.+.+..|++|++++++|++|.++|+++|+++|++||+|+|||+||+++.+..+..+..+.+++.+|+
T Consensus 216 ~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds 295 (475)
T 3k40_A 216 MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADS 295 (475)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSE
T ss_pred cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCE
Confidence 99999999999876666678899999999999999999999999999999999999999988877766666677777999
Q ss_pred EEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 158 VSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 158 ~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
+++++|||+++|.|+|+++++++..+...+...+.|+..... ...+++.+++++++|++.++++|++++.+|..|+.+
T Consensus 296 ~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~ 373 (475)
T 3k40_A 296 FNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQ--GSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQA 373 (475)
T ss_dssp EEECHHHHSSCCSSCEEEEESSGGGC-----------------------------CCCGGGTHHHHHHHHHHHHHHHHHH
T ss_pred EEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCCcC--CCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHH
Confidence 999999999999999999999987666555566778754321 223556677888888887777777777766555554
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
T Consensus 374 -------------------------------------------------------------------------------- 373 (475)
T 3k40_A 374 -------------------------------------------------------------------------------- 373 (475)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
+.++..++++++.+.|+++|||+++ .++..++++|++.+. +..+.++.++|.++|.+++.++.
T Consensus 374 -~~~~~~~~a~~l~~~L~~~~g~~l~-~~~~~~iv~f~~~~~---------------~~~~~~l~~~L~~~g~~~~~~~~ 436 (475)
T 3k40_A 374 -HIRRHCNFAKQFGDLCVADSRFELA-AEINMGLVCFRLKGS---------------NERNEALLKRINGRGHIHLVPAK 436 (475)
T ss_dssp -HHHHHHHHHHHHHHHHHHSTTEEES-SCCBTTEEEEEESSC---------------HHHHHHHHHHHHHHTSCBCEEEE
T ss_pred -HHHHHHHHHHHHHHHHhcCCCEEEe-cCCceEEEEEEeCCc---------------hHHHHHHHHHHHhCCcEEEEeeE
Confidence 5666778899999999999999998 778889999987431 11345889999999988888888
Q ss_pred cCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 398 LQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 398 ~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
+.|. .++|++++ ++.+|++||++++++|+++.+++.
T Consensus 437 ~~g~---~~lR~~~~-~~~tt~~di~~~~~~i~~~~~~~~ 472 (475)
T 3k40_A 437 IKDV---YFLRMAIC-SRFTQSEDMEYSWKEVSAAADEME 472 (475)
T ss_dssp ETTE---EEEEEECC-CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ECCE---EEEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHh
Confidence 8886 89999998 789999999999999999988754
No 4
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=6.9e-42 Score=358.99 Aligned_cols=349 Identities=52% Similarity=0.935 Sum_probs=274.5
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
..++||+|||+||++++.+++.+..++.++.|+...++.+|+++..+|+|+.++++.+|++..+++.+|.++++.+|+++
T Consensus 152 ~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~ 231 (504)
T 2okj_A 152 GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPAD 231 (504)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHH
T ss_pred CCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCCcccEEEEecCCCCCCCHHH
Confidence 46999999999999999999875444444444322234479999999999999999998865468999998899999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
|+++|+++..++.+|++|++++++|++|.++|+++|+++|++||+|+|||+||+++.+..+..+..+.+++.+|++++++
T Consensus 232 L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~ 311 (504)
T 2okj_A 232 FEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNP 311 (504)
T ss_dssp HHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECT
T ss_pred HHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECc
Confidence 99999886666667899999999999999999999999999999999999999999887666555666666799999999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
|||+++|.++|+++++++.++...+...++|+..........+++.+++++.+|++.++++|++++.+|..++.+
T Consensus 312 hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~----- 386 (504)
T 2okj_A 312 HKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFEN----- 386 (504)
T ss_dssp TSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHH-----
T ss_pred hhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHH-----
Confidence 999999999999999987666555556677876543222333556677788899988888888777766555444
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 322 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 322 (448)
+.++
T Consensus 387 ----------------------------------------------------------------------------~~~~ 390 (504)
T 2okj_A 387 ----------------------------------------------------------------------------QINK 390 (504)
T ss_dssp ----------------------------------------------------------------------------HHHH
T ss_pred ----------------------------------------------------------------------------HHHH
Confidence 5566
Q ss_pred HHHHHHHHHHHhhcCCCeEEecc--CCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCC
Q psy14299 323 AVDCSRYFLSQISQRPGFRLVIP--EFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQH 400 (448)
Q Consensus 323 ~~~l~~~~~~~L~~~pg~~l~~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g 400 (448)
..++++++.+.|+++||++++ . ++..++++|++.|....+.....++.+.++..+.++.+.|.++|++++.+..+.+
T Consensus 391 ~~~~a~~l~~~L~~~~~~~~~-~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~ 469 (504)
T 2okj_A 391 CLELAEYLYAKIKNREEFEMV-FNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGD 469 (504)
T ss_dssp HHHHHHHHHHHHTTCTTEEES-SSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETT
T ss_pred HHHHHHHHHHHHhcCCCEEEE-ecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECC
Confidence 777899999999999999998 5 5788999998765432111111223334445567899999999977777655544
Q ss_pred cccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 401 RNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 401 ~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
. .+++|++++ |+++|++||++++++|+++++++
T Consensus 470 ~--~~~lRis~~-~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 470 K--ANFFRMVIS-NPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp E--EEEEEECCC-CTTCCHHHHHHHHHHHHHHHTC-
T ss_pred c--eEEEEEEeC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 2 268999997 79999999999999999887653
No 5
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=2.5e-41 Score=355.76 Aligned_cols=348 Identities=52% Similarity=0.945 Sum_probs=266.3
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
..++||+|||+||++++.+++.+..++.++.|....++..|+++..+|+|+.++++.+|++..+++.+|.++++.+|+++
T Consensus 166 ~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~ 245 (515)
T 2jis_A 166 GDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADERGKMVPED 245 (515)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHH
T ss_pred CCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecCCCCcCCHHH
Confidence 46899999999999999998865333222223211134479999999999999999999865468999998899999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
|+++|+++...+.+|++|++++++|++|.++|+++|+++|++||+|+|||+||+++....+.....+.++..+|++++++
T Consensus 246 L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~ 325 (515)
T 2jis_A 246 LERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNP 325 (515)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECT
T ss_pred HHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECc
Confidence 99999876666667899999999999999999999999999999999999999999988776665666776799999999
Q ss_pred ccccCCCCceEEEEEecc-chhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 163 HKMLGAPLQCSILLIKEK-GLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~-~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
|||+++|.|+|+++++++ .++.......++|+..........++.+.++++.+|++.++++|++++.+|..|+++
T Consensus 326 hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~---- 401 (515)
T 2jis_A 326 HKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLER---- 401 (515)
T ss_dssp TSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHH----
T ss_pred ccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHH----
Confidence 999999999999999887 555555555677775433222233455666778888888888887777766555444
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
+.+
T Consensus 402 -----------------------------------------------------------------------------~~~ 404 (515)
T 2jis_A 402 -----------------------------------------------------------------------------RID 404 (515)
T ss_dssp -----------------------------------------------------------------------------HHH
T ss_pred -----------------------------------------------------------------------------HHH
Confidence 566
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCc
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHR 401 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~ 401 (448)
+..++++++.+.|+++||++++ .++..++++|++.|.++.+.....++.+.++..+..+.+.|.+.|.+++.+....+.
T Consensus 405 ~~~~~a~~l~~~L~~~~g~~~~-~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~ 483 (515)
T 2jis_A 405 QAFVLARYLVEEMKKREGFELV-MEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTR 483 (515)
T ss_dssp HHHHHHHHHHHHHHTSTTEEES-SCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTE
T ss_pred HHHHHHHHHHHHHhcCCCEEEe-CCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCc
Confidence 6778899999999999999998 667778899988665432210122334455555667889999999777665554442
Q ss_pred ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 402 NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 402 ~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
++++|++++ ++++|++||++++++|+++.++
T Consensus 484 --~~~lRis~~-~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 484 --GNFFRVVVA-NSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp --EEEEEEECC-CTTCCHHHHHHHHHHHHHHHTT
T ss_pred --eEEEEEEeC-CCCCCHHHHHHHHHHHHHHHhh
Confidence 369999997 7999999999999999988653
No 6
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=6.2e-40 Score=342.41 Aligned_cols=333 Identities=23% Similarity=0.356 Sum_probs=253.0
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCccccc-CC-C---CCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCC
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRK-GL-S---HLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQ 77 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~-G~-~---~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~ 77 (448)
..|+||+|||+||++++.+++.+..++.+.. |- . ..++.+|+++..+|+|+.++++..|+ .++.+|+++++.
T Consensus 140 ~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~---~v~~v~~d~~~~ 216 (486)
T 1js3_A 140 GGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGV---KLKAIPSDGKFA 216 (486)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTC---EEEEECCCTTSC
T ss_pred CCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCC---ceEEeecCCCCC
Confidence 3589999999999999998876421111110 10 0 00234688999999999999999999 799999988999
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccE
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
+|+++|+++|+++.+.+..|.+|++++++|++|.++|+++|+++|++||+|+|||+||+++.+..+..+..+.++..+|+
T Consensus 217 ~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~ads 296 (486)
T 1js3_A 217 MRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADS 296 (486)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSE
T ss_pred CCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCe
Confidence 99999999998876666667899999999999999999999999999999999999999988777666655556667999
Q ss_pred EEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 158 VSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 158 ~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
+++++|||+++|.++|+++++++..+...+...+.|+...........++.+++++++|++.++++|++++.+|..++.
T Consensus 297 i~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~- 375 (486)
T 1js3_A 297 FNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQ- 375 (486)
T ss_dssp EEECHHHHSSCCSSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHH-
T ss_pred eEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHH-
Confidence 9999999999999999999988765444444456677543211112344455667778887777777766666555544
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
T Consensus 376 -------------------------------------------------------------------------------- 375 (486)
T 1js3_A 376 -------------------------------------------------------------------------------- 375 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
++.++..++++++.+.|+++||++++ .++..++++|++.+. +..+.++.+.|.++|++++.+..
T Consensus 376 ~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~v~f~~~~~---------------~~~~~~l~~~L~~~g~~~~~~~~ 439 (486)
T 1js3_A 376 AYIRKHVQLSHEFEAFVLQDPRFEVC-AEVTLGLVCFRLKGS---------------DGLNEALLERINSARKIHLVPCR 439 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTEEEC-SCCCSSEEEEEESSC---------------HHHHHHHHHHHHHHTSCBCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEe-CCCceeEEEEEecCh---------------HHHHHHHHHHHHhcCCEEEEEEE
Confidence 45666777899999999999999998 667788999976421 11235788999988977777766
Q ss_pred cCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHHh
Q psy14299 398 LQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDLE 439 (448)
Q Consensus 398 ~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~~ 439 (448)
+.+. +++|++++ ++++|++||+++++.|+++.+++..+
T Consensus 440 ~~~~---~~lRi~~~-~~~~t~~di~~~~~~l~~~~~~~~~~ 477 (486)
T 1js3_A 440 LRGQ---FVLRFAIC-SRKVESGHVRLAWEHIRGLAAELLAA 477 (486)
T ss_dssp ETTE---EEEEEECC-CTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred ECCE---EEEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 6665 89999987 78999999999999999998776543
No 7
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=5.3e-39 Score=336.51 Aligned_cols=331 Identities=27% Similarity=0.437 Sum_probs=249.3
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcC-----CcccccCCCCC-CCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCC
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLD-----PDTKRKGLSHL-PPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERG 76 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~-----~~~~~~G~~~~-~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g 76 (448)
..++||+|||+||+.++.++|.... ++.+..|+... ++..|+++..+|+|+.++++.+|.+..+++.+|.++++
T Consensus 159 ~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~ 238 (497)
T 2qma_A 159 ADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANADG 238 (497)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTS
T ss_pred CCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCCCC
Confidence 4799999999999999998865421 22233443210 13379999999999999999998865468999999899
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCcc
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRAN 156 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD 156 (448)
.+|+++|+++|+++.+.+.+|.+|++++++|++|.++|+++|+++|++||+|+|||+||+++..+.+ +...+.+++.+|
T Consensus 239 ~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D 317 (497)
T 2qma_A 239 TMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAH 317 (497)
T ss_dssp SBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCS
T ss_pred cCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCC
Confidence 9999999999987655554566899999999999999999999999999999999999999987666 555556666799
Q ss_pred EEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHH
Q psy14299 157 SVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 236 (448)
Q Consensus 157 ~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~ 236 (448)
++++++|||+++|.++|+++++++..+.. +...+.|+.... ...+++..++++++|++.++++|++++.+|..++.
T Consensus 318 ~i~~s~hK~l~~p~~~G~l~~~~~~~~~~-~~~~~~yl~~~~---~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~ 393 (497)
T 2qma_A 318 SISVDFHKLFYQTISCGALLVNDKSNFKF-LLHHADYLNREH---DELPNLVDKSIATTKRFDALKVFMTMQNVGPKALG 393 (497)
T ss_dssp EEEEETTTTTCCCSSCEEEEESCGGGGGG-GCC-----------------------CCSCCCTHHHHHHHHHHTCHHHHH
T ss_pred EEEEcchhccCCCcceEEEEEeCHHHHHH-hcCCchhcCCcc---ccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHH
Confidence 99999999999999999999988765443 333456664322 11234455667788888887777777776655555
Q ss_pred HHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccH
Q psy14299 237 HFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 316 (448)
Q Consensus 237 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 316 (448)
+
T Consensus 394 ~------------------------------------------------------------------------------- 394 (497)
T 2qma_A 394 D------------------------------------------------------------------------------- 394 (497)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred H-------------------------------------------------------------------------------
Confidence 5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee
Q psy14299 317 RHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ 396 (448)
Q Consensus 317 ~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~ 396 (448)
+.++..++++++.+.|+++|+++++ .++..++++|++.+.+. ..+.++.++.+.|.++|.++..+.
T Consensus 395 --~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~v~f~~~~~~~-----------~~~~l~~~l~~~l~~~G~~~~~~~ 460 (497)
T 2qma_A 395 --MYDHLLAQTLEVADMIRTNDQFELL-AEPSLSTVLFRATHETA-----------DLDELNKALRLEALTRGIAVLGET 460 (497)
T ss_dssp --HHHHHHHHHHHHHHHHHTCTTEEEC-SCCSSSEEEEEECCSSS-----------CHHHHHHHHHHHHHHHTSCBCEEE
T ss_pred --HHHHHHHHHHHHHHHHhhCCCeEEE-cCCCceEEEEEEcCCcc-----------CHHHHHHHHHHHHHhCCCEEEEee
Confidence 5556677899999999999999998 67788899998754321 112234578889999997776666
Q ss_pred ecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 397 PLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 397 ~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
.+.+. +++|++++ ++++|++|+++++++|+++.++
T Consensus 461 ~~~g~---~~lRis~~-~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 461 IVDGK---TALKFTIL-NPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp EETTE---EEEEEECC-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred EECCE---EEEEEEec-CCCCCHHHHHHHHHHHHHHHHh
Confidence 66665 79999987 7999999999999999998765
No 8
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=100.00 E-value=8.9e-34 Score=293.19 Aligned_cols=314 Identities=16% Similarity=0.168 Sum_probs=228.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e~ 82 (448)
.+++|+|||+||++++.+++....++.++.|+. .+++.|+++. +|+++.+++++.|+ +++.+|+++ ++.+|+++
T Consensus 105 ~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~-~~~~~vi~~~-~h~~~~~~~~~~G~---~v~~v~~~~~~~~~d~~~ 179 (452)
T 2dgk_A 105 VGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKP-TDKPNLVCGP-VQICWHKFARYWDV---ELREIPMRPGQLFMDPKR 179 (452)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCC-CSCCEEEESS-CCHHHHHHHHHTTC---EEEECCCBTTBCSCCHHH
T ss_pred ceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCcEEEECC-CcHHHHHHHHHcCc---eEEEEecCCCCCeECHHH
Confidence 589999999999999988875322112223432 1234788898 99999999999999 799999887 78999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc------CCEEEEeccccccccc--ccchhhhhcCCCC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY------DLWMHVDACWGGSLIF--SEKYSFVLKGINR 154 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~------g~~l~VD~A~~~~~~~--~~~~~~~~~~~~~ 154 (448)
|+++|++ +|++|++++++|++|.++|+++|+++|++| |+|+|||+||+++..+ .+.....+ .+..
T Consensus 180 l~~~i~~------~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~ 252 (452)
T 2dgk_A 180 MIEACDE------NTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF-RLPR 252 (452)
T ss_dssp HHHHCCT------TEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST-TSTT
T ss_pred HHHHHhh------CCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhc-CCCC
Confidence 9999965 478999999999999999999999999996 9999999999987652 12111112 2446
Q ss_pred ccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCc-hhHHHHHHHHHhChH
Q psy14299 155 ANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKV-DAFKLWLMWKARGNL 233 (448)
Q Consensus 155 aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~ 233 (448)
+|++++++|||+++|.++|+++++++..+...+...+.|+... ...+++++++++ ..+.+|++++.+
T Consensus 253 ~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~r~~~~~~~~~aal~~l--- 320 (452)
T 2dgk_A 253 VKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQ---------IGTFAINFSRPAGQVIAQYYEFLRL--- 320 (452)
T ss_dssp EEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCC---------EEECCSCCSCBCHHHHHHHHHHHHH---
T ss_pred CcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCC---------CCCcccCCCChhHHHHHHHHHHHHH---
Confidence 8999999999999999999999987654433322334554311 112234455554 344455444444
Q ss_pred HHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcC
Q psy14299 234 GFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 313 (448)
Q Consensus 234 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (448)
+.
T Consensus 321 ------------------------------------------------------------------------------g~ 322 (452)
T 2dgk_A 321 ------------------------------------------------------------------------------GR 322 (452)
T ss_dssp ------------------------------------------------------------------------------HH
T ss_pred ------------------------------------------------------------------------------hH
Confidence 44
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccC----CceeeEEEEeeccCCCccccchhhhhhhhhh-hHHHHHHHHhC
Q psy14299 314 LGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPE----FQCTNICFWFIPVSLRDKVEDETWWSTLSKV-APRIKEKLVLG 388 (448)
Q Consensus 314 ~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~L~~~ 388 (448)
+|++++.++..++++++.+.|+++|+++++ .+ +..++++|++.+.... .. ..++.+.|.++
T Consensus 323 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~~~~~v~f~~~~~~~~-------------~~~~~~l~~~L~~~ 388 (452)
T 2dgk_A 323 EGYTKVQNASYQVAAYLADEIAKLGPYEFI-CTGRPDEGIPAVCFKLKDGEDP-------------GYTLYDLSERLRLR 388 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSSEEEE-EECCTTTBSSEEEEEECTTCCC-------------SCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-cCCCCCCCeEEEEEEecCcccc-------------cCCHHHHHHHHHhc
Confidence 555667777888899999999999899997 44 5678899987532100 01 14788999999
Q ss_pred CcEEEE---eeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHH
Q psy14299 389 GTLMIG---YQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDL 438 (448)
Q Consensus 389 g~~~~~---~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~ 438 (448)
|+.+.. +....+. .++|++++ .++|++|+|+++++|+++.+.+..
T Consensus 389 Gi~v~~~~~~~~~~~~---~~lRis~~--~~~t~e~id~li~~l~~~~~~~~~ 436 (452)
T 2dgk_A 389 GWQVPAFTLGGEATDI---VVMRIMCR--RGFEMDFAELLLEDYKASLKYLSD 436 (452)
T ss_dssp TCBCCEEECSTTCTTC---EEEEEECC--TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeeeeeeCCcccCCe---EEEEEEec--CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 963211 2222233 69999994 677899999999999999877654
No 9
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=100.00 E-value=1.4e-33 Score=295.88 Aligned_cols=317 Identities=16% Similarity=0.141 Sum_probs=235.5
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-CCcCHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-GQMICS 81 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-g~id~e 81 (448)
..|++|+|||++|++++.+++.++.++.++.|.. ..+..|+++..+|+++.+++++.|+ .++.+|++++ +.+|++
T Consensus 118 ~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~-~~~~~vi~~~~~h~s~~~~~~~~G~---~~~~v~~~~~~~~~d~~ 193 (502)
T 3hbx_A 118 AVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKP-VDKPNIVTGANVQVCWEKFARYFEV---ELKEVKLSEGYYVMDPQ 193 (502)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCC-CSCCEEEEETTCCHHHHHHHHHTTC---EEEEECCBTTBCSCCHH
T ss_pred CcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCC-CCCcEEEEcCCchHHHHHHHHHcCc---eeEEEecCCCcCcCCHH
Confidence 3578999999999999988876543323333432 1233789999999999999999999 7899998876 899999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc------CCEEEEeccccccccc--ccchhhhhcCCC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY------DLWMHVDACWGGSLIF--SEKYSFVLKGIN 153 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~------g~~l~VD~A~~~~~~~--~~~~~~~~~~~~ 153 (448)
+|++++++ +|++|++++++|++|.++|+++|+++|+++ |+|+|||+||+++..+ .+..+..+. +.
T Consensus 194 ~l~~~i~~------~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~-~~ 266 (502)
T 3hbx_A 194 QAVDMVDE------NTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LP 266 (502)
T ss_dssp HHHHHCCT------TEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT-ST
T ss_pred HHHHHHhh------CCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccC-CC
Confidence 99999965 488999999999999999999999999999 9999999999977642 232222222 34
Q ss_pred CccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCc-hhHHHHHHHHHhCh
Q psy14299 154 RANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKV-DAFKLWLMWKARGN 232 (448)
Q Consensus 154 ~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~ 232 (448)
.+|++++++|||+++|.|+|+++++++..+...+...+.|+.... ..+.+..+++. ..+.+|
T Consensus 267 ~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~---------~~~~~~~sr~~~~~~a~~-------- 329 (502)
T 3hbx_A 267 LVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQ---------PTFTLNFSKGSSQVIAQY-------- 329 (502)
T ss_dssp TEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCE---------EECCSCCSCBSHHHHHHH--------
T ss_pred CceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCC---------CCccccCCchHHHHHHHH--------
Confidence 789999999999999999999999887665544444455654321 11223344443 233344
Q ss_pred HHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhc
Q psy14299 233 LGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARG 312 (448)
Q Consensus 233 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (448)
.+++.++
T Consensus 330 -------------------------------------------------------------------------~al~~lg 336 (502)
T 3hbx_A 330 -------------------------------------------------------------------------YQLIRLG 336 (502)
T ss_dssp -------------------------------------------------------------------------HHHHHHH
T ss_pred -------------------------------------------------------------------------HHHHHHH
Confidence 4444455
Q ss_pred CccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccC-CceeeEEEEeeccC-CCccccchhhhhhhhhhhHHHHHHHHhCCc
Q psy14299 313 NLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPE-FQCTNICFWFIPVS-LRDKVEDETWWSTLSKVAPRIKEKLVLGGT 390 (448)
Q Consensus 313 ~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~-~~~~~v~f~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~ 390 (448)
.+|++++.++..++++++.+.|+++++|+++ .+ +..++++|++.+.. ++ ..++.+.|.++|+
T Consensus 337 ~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~~v~f~~~~~~~~~---------------~~~l~~~L~~~Gi 400 (502)
T 3hbx_A 337 HEGYRNVMENCRENMIVLREGLEKTERFNIV-SKDEGVPLVAFSLKDSSCHT---------------EFEISDMLRRYGW 400 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCEEEC-SCSSSSSEEEEEESSCSSCC---------------HHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE-eCCCCceEEEEEecCCCcCC---------------HHHHHHHHHhCCc
Confidence 5566667778888899999999999889998 65 68899999875321 11 1378899999996
Q ss_pred EEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHH
Q psy14299 391 LMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDL 438 (448)
Q Consensus 391 ~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~ 438 (448)
++.....+.......++|+++ +..+|++|+++|+++|+++.+.+..
T Consensus 401 ~v~~~~~p~~~~~~~~lRisv--~~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 401 IVPAYTMPPNAQHITVLRVVI--REDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp BCCEEECCTTCTTCEEEEEEC--CTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeeccCCcccCCceEEEEEe--CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 543322222111127899999 6899999999999999999887654
No 10
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.96 E-value=7.8e-29 Score=256.69 Aligned_cols=288 Identities=16% Similarity=0.154 Sum_probs=202.8
Q ss_pred EEEeCcHH-HHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec---CCCCCcCH
Q psy14299 5 PFLLPGGS-ISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT---NERGQMIC 80 (448)
Q Consensus 5 g~~t~ggT-~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~---~~~g~id~ 80 (448)
++||+||| ++|+.++.+++... +++.|+++..+|+|+.++++..|+ +++.++. ++++.+|+
T Consensus 152 ~~~t~g~te~a~~~al~~~~~~~------------~~~~vi~~~~~h~s~~~~~~~~G~---~~~~v~~~~~~~~~~~d~ 216 (456)
T 2z67_A 152 AIATPISTGMSISLCLSAARKKY------------GSNVVIYPYASHKSPIKAVSFVGM---NMRLVETVLDGDRVYVPV 216 (456)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHH------------CCCEEEEECCCCHHHHHHHHHTTC---EEEEECCEEETTEEECCH
T ss_pred EEEeCcHHHHHHHHHHHHHHHhc------------CCCEEEEECCCcHHHHHHHHHcCC---CceEEEEeccCCCCCcCH
Confidence 89999999 67777877765521 344577777899999999999998 6777775 67789999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccc-cccchhhhhcCCCCccEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLI-FSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~-~~~~~~~~~~~~~~aD~~~ 159 (448)
++|+++|++.... .++.+|+++.++|++|.++|+++|+++|+++|+|+|||+||+.... ..+.......+ .+|+++
T Consensus 217 ~~l~~~i~~~~~~-~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~--~~D~~~ 293 (456)
T 2z67_A 217 EDIENAIKKEIEL-GNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY--RVDAVV 293 (456)
T ss_dssp HHHHHHHHHHHHT-TCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS--CCSEEE
T ss_pred HHHHHHHHHHhhC-CCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC--CCCEEE
Confidence 9999999432111 2577888899999999999999999999999999999999886554 22221111222 589999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
+|+|||+++|.|+|++++++++++... .+.|.... ...
T Consensus 294 ~s~hK~~~~p~g~G~l~~~~~~~~~~l---~~~~~g~~-------------------~~~-------------------- 331 (456)
T 2z67_A 294 SSSDKNLLTPIGGGLVYSTDAEFIKEI---SLSYPGRA-------------------SAT-------------------- 331 (456)
T ss_dssp EEHHHHHCCCSSCEEEEESCHHHHHHH---HTTSCSCB-------------------CSH--------------------
T ss_pred EcCCCCcCCCCCeEEEEEcCHHHHhhc---CcCCCCCC-------------------CCC--------------------
Confidence 999999999999999999766554432 12222110 000
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 319 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 319 (448)
..+.++.++..++.+|++++
T Consensus 332 ------------------------------------------------------------~~~~~~aal~~l~~~~~~~~ 351 (456)
T 2z67_A 332 ------------------------------------------------------------PVVNTLVSLLSMGSKNYLEL 351 (456)
T ss_dssp ------------------------------------------------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------HHHHHHHHHHHHHHHHHHHH
Confidence 02223344455556677888
Q ss_pred HHHHHHHHHHHHHHhhcCC---CeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee
Q psy14299 320 VDNAVDCSRYFLSQISQRP---GFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ 396 (448)
Q Consensus 320 ~~~~~~l~~~~~~~L~~~p---g~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~ 396 (448)
.++..++++++.+.|+++| |+.++ . +. ++++|.+..++. ..++.+.|.++|+..+...
T Consensus 352 ~~~~~~~~~~l~~~L~~~~~~~g~~v~-~-~~-~~v~~~~~~~~~----------------~~~l~~~L~~~gi~~~rv~ 412 (456)
T 2z67_A 352 VKNQKNSKKLLDELLNDLSKKTGGKFL-D-VE-SPIASCISVNSD----------------PVEIAAKLYNLRVTGPRGI 412 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCCBC-C-CC-CSSEEEEECSSC----------------HHHHHHHHHHTTEESCEEE
T ss_pred HHHHHHHHHHHHHHHHhcccccCCEec-C-CC-CeEEEEEecccH----------------HHHHHHHHHHcCCCcceEE
Confidence 8899999999999999987 87765 3 44 788886531111 1267788888873111111
Q ss_pred --------ecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHH
Q psy14299 397 --------PLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRG 433 (448)
Q Consensus 397 --------~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~ 433 (448)
........+++|+|+ ++++|++|||+++++|+++.
T Consensus 413 ~~~g~f~G~~~~~~~~~~vr~s~--~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 413 KKTDHFGNCYLGTYTHDYIVMNA--AIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp CTTCHHHHTCSSCCSCCEEEEEC--CTTCCHHHHHHHHHHHHTC-
T ss_pred eecCccccccccccCcchhhhhh--hcCCCHHHHHHHHHHHHHHh
Confidence 000011136899999 78999999999999998653
No 11
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.96 E-value=2.2e-28 Score=256.83 Aligned_cols=302 Identities=19% Similarity=0.204 Sum_probs=220.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
+|++|+|||++|.+++.+++.+.. ++.| .+++.|+++..+|.++.++++..|+ +++.+|.++++.+|+++|
T Consensus 162 ~~~~t~ggt~a~~~al~a~~~~g~---~~~g---~~~d~Vi~~~~~~~~~~~~~~~~G~---~v~~v~~~~~~~~d~~~L 232 (514)
T 3mad_A 162 CGTVTSGGTESLLLAMKTYRDWAR---ATKG---ITAPEAVVPVSAHAAFDKAAQYFGI---KLVRTPLDADYRADVAAM 232 (514)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHH---HHHC---CSSCEEEEETTSCTHHHHHHHHHTC---EEEEECBCTTSCBCHHHH
T ss_pred ceEEcCcHHHHHHHHHHHHHHHhh---hhcC---CCCCeEEEeCccchHHHHHHHHcCC---eeEEeeeCCCCCCCHHHH
Confidence 569999999999999998876521 1122 1346799999999999999999999 799999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccc--------cchhhhhcCCCCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFS--------EKYSFVLKGINRA 155 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~--------~~~~~~~~~~~~a 155 (448)
++++++ ++++|++++++|++|.++|+++|.++|++||+|+|+|+||+++..+. +.... ...++
T Consensus 233 e~~i~~------~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~---~~~g~ 303 (514)
T 3mad_A 233 REAITP------NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDF---RLEGV 303 (514)
T ss_dssp HHHCCT------TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCST---TSTTC
T ss_pred HHHhcc------CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccc---cCCCC
Confidence 999964 58899999999999999999999999999999999999999876531 11111 12357
Q ss_pred cEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHH
Q psy14299 156 NSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 235 (448)
Q Consensus 156 D~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ 235 (448)
|++++++||++++|.++|+++++++............|.... +....+.+++..
T Consensus 304 d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~gs~~~----------------- 357 (514)
T 3mad_A 304 TSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGGL---------YFSPTFAGSRPG----------------- 357 (514)
T ss_dssp CEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTCS---------EEESSSCSSCCH-----------------
T ss_pred cEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCCc---------ccCCccCCCCch-----------------
Confidence 999999999999999999999988654332111111111000 001111122221
Q ss_pred HHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCcc
Q psy14299 236 RHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 315 (448)
Q Consensus 236 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 315 (448)
...++++.+++.++.+|
T Consensus 358 ---------------------------------------------------------------~~~~a~~aal~~l~~~~ 374 (514)
T 3mad_A 358 ---------------------------------------------------------------ALSATAWAAMLSLGEEG 374 (514)
T ss_dssp ---------------------------------------------------------------HHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------HHHHHHHHHHHHHhHHH
Confidence 12334455566666677
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEe
Q psy14299 316 FRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGY 395 (448)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~ 395 (448)
++++.++..++++++.+.|+++|+++++ .++ .+++.|. +.+.+ ..++.+.|.++|+++ ..
T Consensus 375 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~-~~~~~~~--~~~~~---------------~~~l~~~L~~~Gi~v-~g 434 (514)
T 3mad_A 375 YLDATRRILQAADRLKAGVRAIPSLKIL-GDP-LWVIAVA--SDELN---------------IYQVMEEMAGRGWRL-NG 434 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTCEES-SCC-SSEEEEE--CSSSC---------------HHHHHHHHHTTTCBC-EE
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEe-CCC-eEEEEEe--CCCCC---------------HHHHHHHHHhcCCEe-cc
Confidence 7788888899999999999999999987 444 3444443 22221 237889999999544 22
Q ss_pred eecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHH
Q psy14299 396 QPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDL 438 (448)
Q Consensus 396 ~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~ 438 (448)
. .. ++.+|++++ +..++++|+++++++|+++.+++..
T Consensus 435 ~-~~----~~~~Ri~~~-~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 435 L-HR----PPAFHVALT-LRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp E-TT----TTEEEEECC-GGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred C-CC----CCeEEEEEe-cCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2 11 268999996 5777889999999999999887654
No 12
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-28 Score=257.70 Aligned_cols=301 Identities=17% Similarity=0.210 Sum_probs=220.9
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICS 81 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e 81 (448)
..+++|+|||++|.+++.+++++.. ++.|+ +++.|+++...|.++.++++..|+ +++.+|.++ ++.+|++
T Consensus 127 ~~~~~~~ggt~a~~~a~~a~~~~~~---~~~g~---~~~~Vi~~~~~h~~~~~~~~~~G~---~~~~v~~~~~~~~~d~~ 197 (497)
T 3mc6_A 127 GCGTTTSGGTESLLLACLSAKMYAL---HHRGI---TEPEIIAPVTAHAGFDKAAYYFGM---KLRHVELDPTTYQVDLG 197 (497)
T ss_dssp CCEEEESSHHHHHHHHHHHHHHHHH---HHSCC---SSCEEEEETTSCHHHHHHHHHSCC---EEEEECBCTTTCSBCTT
T ss_pred CeEEEcCcHHHHHHHHHHHHHHHHH---hcCCC---CCceEEEeCCccHHHHHHHHHcCC---eEEEEecCcccCcCCHH
Confidence 3689999999999999998876421 11232 345799999999999999999999 799999987 7899999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccc---------cchhhhhcCC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFS---------EKYSFVLKGI 152 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~---------~~~~~~~~~~ 152 (448)
+|++++++ ++++|++++++|++|.++|+++|+++|++||+|+|||+||+++..++ +.... ..
T Consensus 198 ~l~~~i~~------~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~---~~ 268 (497)
T 3mc6_A 198 KVKKFINK------NTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDF---RV 268 (497)
T ss_dssp TTGGGCCS------SEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCST---TS
T ss_pred HHHHHHhh------CCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccc---cC
Confidence 99999854 48899999999999999999999999999999999999999765431 11111 12
Q ss_pred CCccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhCh
Q psy14299 153 NRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 232 (448)
Q Consensus 153 ~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 232 (448)
.++|+++.++||++++|.++|+++++++.+........+.|.... ++...+.+++. .
T Consensus 269 ~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~-~------------- 325 (497)
T 3mc6_A 269 PGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGL---------YGSPTLAGSRP-G------------- 325 (497)
T ss_dssp TTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTSC---------BCCSSSCSSCB-H-------------
T ss_pred CCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCCC---------cCCcCcccCCc-c-------------
Confidence 357999999999999999999999987654322211112222110 11122222221 1
Q ss_pred HHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhc
Q psy14299 233 LGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARG 312 (448)
Q Consensus 233 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (448)
...++++.+++.++
T Consensus 326 ------------------------------------------------------------------~~~~a~~aal~~l~ 339 (497)
T 3mc6_A 326 ------------------------------------------------------------------AIVVGCWATMVNMG 339 (497)
T ss_dssp ------------------------------------------------------------------HHHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------------hhHHHHHHHHHHHh
Confidence 11233445555566
Q ss_pred CccHHHHHHHHHHHHHHHHHHhhc-CCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcE
Q psy14299 313 NLGFRHFVDNAVDCSRYFLSQISQ-RPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTL 391 (448)
Q Consensus 313 ~~G~~~~~~~~~~l~~~~~~~L~~-~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~ 391 (448)
.+|++++.++..++++++++.|++ +||++++ .++..++++|... +.+ ..++.+.|.++|+.
T Consensus 340 ~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~-~~~~~~~v~~~~~--~~~---------------~~~l~~~L~~~Gi~ 401 (497)
T 3mc6_A 340 ENGYIESCQEIVGAAMKFKKYIQENIPDLDIM-GNPRYSVISFSSK--TLN---------------IHELSDRLSKKGWH 401 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEEC-SCCCSSEEEEECT--TTT---------------HHHHHHHHHTTTCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe-cCCCeeEEEEeCC--CCC---------------HHHHHHHHHhCCEE
Confidence 667777788888899999999999 7999998 6777888887531 111 23788999999954
Q ss_pred EEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 392 MIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 392 ~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
+... .. +..+|+++ + .+|++|+++++++|+++.+++.
T Consensus 402 -v~~~--~~---~~~~ri~~--~-~~t~e~i~~~~~~L~~~l~~~~ 438 (497)
T 3mc6_A 402 -FNAL--QK---PVALHMAF--T-RLSAHVVDEICDILRTTVQELK 438 (497)
T ss_dssp -CEEC--CS---SCCEEEEC--C-TTTTCTHHHHHHHHHHHHHHHT
T ss_pred -EecC--CC---CCeEEEEE--e-CCCHHHHHHHHHHHHHHHHHHH
Confidence 3322 12 24689999 4 6799999999999999988764
No 13
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.96 E-value=5e-27 Score=235.85 Aligned_cols=300 Identities=20% Similarity=0.294 Sum_probs=218.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.+++|+|||+++..++.+++.+.. +.+..|....+++.|+++..+|+++..+++..|. +++.+|.++++.+|+++|
T Consensus 88 ~i~~~~ggt~a~~~~~~~~~~~~~-~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l 163 (397)
T 3f9t_A 88 YGHIVSGGTEANLMALRCIKNIWR-EKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDL---EYIYAPIKEDYTIDEKFV 163 (397)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHH-HHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTC---EEEEECBCTTSSBCHHHH
T ss_pred CEEEecCcHHHHHHHHHHHHHHHH-hhhhhcccCCCCeEEEECCcchhHHHHHHHHcCc---eeEEEeeCCCCcCCHHHH
Confidence 569999999999999988776411 0111232223577899999999999999999999 899999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccch---------hhhhcCCCC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKY---------SFVLKGINR 154 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~---------~~~~~~~~~ 154 (448)
++++++. ++++|++++++|++|.+.|+++|.++|++||+++|+|++|+++....... ...+. . .
T Consensus 164 ~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 236 (397)
T 3f9t_A 164 KDAVEDY-----DVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFS-L-G 236 (397)
T ss_dssp HHHHHHS-----CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGG-G-T
T ss_pred HHHHhhc-----CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhccccccccccccccccc-c-c
Confidence 9999762 47899999999999999999999999999999999999999876532211 11111 1 4
Q ss_pred ccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHH
Q psy14299 155 ANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 234 (448)
Q Consensus 155 aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g 234 (448)
+|++++++||++++|.++|+++++++.+.... ....+|+.... ......++..
T Consensus 237 ~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~----------~~~~~~~~~~---------------- 289 (397)
T 3f9t_A 237 VDSITIDPHKMGHCPIPSGGILFKDIGYKRYL-DVDAPYLTETR----------QATILGTRVG---------------- 289 (397)
T ss_dssp CSEEECCTTTTTCCCSSCEEEEESSGGGGGGT-CEECTTSSSSE----------ECSSCSSCCS----------------
T ss_pred CCeEEEccccccCCCCCceEEEEeCHHHHHhh-ccCCccccCCC----------cccccccccc----------------
Confidence 79999999999999999999999887544332 22233332211 0001111111
Q ss_pred HHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc
Q psy14299 235 FRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 314 (448)
Q Consensus 235 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (448)
...+..+.++..++.+
T Consensus 290 ----------------------------------------------------------------~~~~~~~a~~~~~~~~ 305 (397)
T 3f9t_A 290 ----------------------------------------------------------------FGGACTYAVLRYLGRE 305 (397)
T ss_dssp ----------------------------------------------------------------HHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------chHHHHHHHHHHHhHH
Confidence 1122333344444556
Q ss_pred cHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEE
Q psy14299 315 GFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIG 394 (448)
Q Consensus 315 G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~ 394 (448)
+++++.++..++++++.+.|+++ |++++ .++..+.+.|...+ ..++.+.|.++|+ .+.
T Consensus 306 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~-------------------~~~~~~~l~~~gi-~v~ 363 (397)
T 3f9t_A 306 GQRKIVNECMENTLYLYKKLKEN-NFKPV-IEPILNIVAIEDED-------------------YKEVCKKLRDRGI-YVS 363 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SCCSSSEEEEECTT-------------------HHHHHHHHHHTTC-BCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCEEE-cCCCccEEEEEeCC-------------------HHHHHHHHHhCCe-EEe
Confidence 67778888889999999999999 98876 66677777765321 1378889999984 444
Q ss_pred eeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 395 YQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 395 ~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
+... ++++|+++ +.++|++|+++++++|+++.+
T Consensus 364 ~~~~-----~~~~Ri~~--~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 364 VCNC-----VKALRIVV--MPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp ECSS-----SSEEEEEC--CTTCCHHHHHHHHHHHHHHC-
T ss_pred ccCC-----CCEEEEEE--cCCCCHHHHHHHHHHHHHhhC
Confidence 4321 26899999 678999999999999998754
No 14
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.95 E-value=1.9e-27 Score=243.09 Aligned_cols=203 Identities=15% Similarity=0.157 Sum_probs=146.2
Q ss_pred ccEEEeCcHH-HHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 3 LKPFLLPGGS-ISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 3 ~~g~~t~ggT-~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
.++++|+|+| +++.+++.++|.... +++.|++++.+|.|+.+++.++|++++.+..++.++.+.+|++
T Consensus 117 ~~~~lV~GaT~~~~a~~L~aar~~~~-----------~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~id~~ 185 (450)
T 3bc8_A 117 ASCFVVPMATGMSLTLCFLTLRHKRP-----------KAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTDLK 185 (450)
T ss_dssp CEEEEESSCHHHHHHHHHHHHHHHCT-----------TCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHH
T ss_pred ceEEEECCHHHHHHHHHHHHcchhhc-----------CCCEEEEECCcHHHHHHHHHHcCCeeEEEEeeecCccCCcCHH
Confidence 3579999998 778888888777421 2346788899999999999999995443444444667899999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCC--CCccEEE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGI--NRANSVS 159 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~--~~aD~~~ 159 (448)
.|+++|+++.. ..+.+|+.+.+++.+|.++||++|+++||+||+|+|||+|||+...+...... .++ +.+|+++
T Consensus 186 ~le~aI~~~~~--~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~--~a~~~~~AD~~v 261 (450)
T 3bc8_A 186 AVEAKIQELGP--EHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQ--QGARVGRIDAFV 261 (450)
T ss_dssp HHHHHHHHHCG--GGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHH--HHHHHSCCCEEE
T ss_pred HHHHHHHhcCC--CCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHH--HHhcccCCCEEE
Confidence 99999987531 13445555544444669999999999999999999999999987765433221 122 4689999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
.|+|||+++|.|++++++++++.+..... .|... +. ..+++.+|+.+..+|.+++++.+
T Consensus 262 ~S~HK~l~a~~~~~~l~~rd~~~~~~~~~---~~~g~----------------~s--~SpsL~l~~~l~~~G~~g~~~~i 320 (450)
T 3bc8_A 262 QSLDKNFMVPVGGAIIAGFNEPFIQDISK---MYPGR----------------AS--ASPSLDVLITLLSLGCSGYRKLL 320 (450)
T ss_dssp EEHHHHHSCCSSCEEEEESCHHHHHHHHH---HSCSC----------------BC--SHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCccCCCchhccEEEEecCHHHHHHHHH---HhhcC----------------Cc--ccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987766554321 12110 00 11246778877777777777655
Q ss_pred HH
Q psy14299 240 DN 241 (448)
Q Consensus 240 ~~ 241 (448)
++
T Consensus 321 ~~ 322 (450)
T 3bc8_A 321 KE 322 (450)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 15
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.95 E-value=6.9e-26 Score=226.32 Aligned_cols=292 Identities=14% Similarity=0.183 Sum_probs=205.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHh---CCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWL---GIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~---g~~~~~v~~v~~~~~g~id~ 80 (448)
.+++|+|||+++..++.+...... .+++.|+++..+|+++...+..+ |. +++.+|.++++.+|+
T Consensus 62 ~i~~~~g~~~a~~~~~~~~~~~~~----------~~gd~vi~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~ 128 (382)
T 4hvk_A 62 TVVFTSGATEANNLAIIGYAMRNA----------RKGKHILVSAVEHMSVINPAKFLQKQGF---EVEYIPVGKYGEVDV 128 (382)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHG----------GGCCEEEEETTCCHHHHHHHHHHHHTTC---EEEEECBCTTSCBCH
T ss_pred eEEEECCchHHHHHHHHHhhhhhc----------CCCCEEEECCCCcHHHHHHHHHHHhcCC---EEEEeccCCCCCcCH
Confidence 489999999999998887763100 15678999999999998877764 66 799999999999999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
++|++++++ ++++|++++++|++|.+.|+++|.++|++||+ +|+|++|+.+....+.... .+|+++.
T Consensus 129 ~~l~~~i~~------~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~------~~d~~~~ 195 (382)
T 4hvk_A 129 SFIDQKLRD------DTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKI------GADMLTI 195 (382)
T ss_dssp HHHHHHCCT------TEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHH------TCSEEEE
T ss_pred HHHHHHhcc------CceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhc------CCCEEEE
Confidence 999999864 57899999999999999999999999999999 9999999887664432111 3699999
Q ss_pred CCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
++||++ +|.|+|+++++++..+. .++..... ......+..
T Consensus 196 s~~K~~-g~~g~g~~~~~~~~~~~-------~~~~~~~~---------~~~~~~~~~----------------------- 235 (382)
T 4hvk_A 196 SSNDIY-GPKGVGALWIRKEAKLQ-------PVILGGGQ---------ENGLRSGSE----------------------- 235 (382)
T ss_dssp ESGGGT-SCTTCEEEEEETTCCCC-------CSSCSSCT---------GGGTSCSCC-----------------------
T ss_pred eHHHhc-CCCceEEEEEcCccCcC-------cccccCCC---------cCccccCCc-----------------------
Confidence 999975 58889999997764111 11111000 000000000
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
+...+.++..+++.. .++++++.
T Consensus 236 --------------------------------------------------------~~~~~~~~~~al~~~-~~~~~~~~ 258 (382)
T 4hvk_A 236 --------------------------------------------------------NVPSIVGFGKAAEIT-AMEWREEA 258 (382)
T ss_dssp --------------------------------------------------------CHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred --------------------------------------------------------CHHHHHHHHHHHHHH-HhhHHHHH
Confidence 011122222333322 24778889
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEeccCCc---eeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 321 DNAVDCSRYFLSQISQRPGFRLVIPEFQ---CTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~~pg~~l~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
++..++++++.+.|+++|+++++ .++. .+.+.|.+. +.+ ..++.+.|.++|+. +.++.
T Consensus 259 ~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~---------------~~~~~~~l~~~gi~-v~~g~ 319 (382)
T 4hvk_A 259 ERLRRLRDRIIDNVLKIEESYLN-GHPEKRLPNNVNVRFS--YIE---------------GESIVLSLDMAGIQ-ASTGS 319 (382)
T ss_dssp HHHHHHHHHHHHHHTTSTTEEEC-SCSSSBCTTEEEEEET--TCC---------------HHHHHHHHHHTTCB-CBCC-
T ss_pred HHHHHHHHHHHHHHhcCCCeEEe-CCccccCCCEEEEEEC--CCC---------------HHHHHHHHHHCCEE-EeeCC
Confidence 99999999999999999999987 4332 235566542 221 23678889888843 43321
Q ss_pred cCCcc-----------------cccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHHh
Q psy14299 398 LQHRN-----------------LHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDLE 439 (448)
Q Consensus 398 ~~g~~-----------------~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~~ 439 (448)
..+.. ..+++|+++ +.++|++|+++++++|+++.+++...
T Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~--~~~~t~e~i~~~~~~l~~~~~~~~~~ 376 (382)
T 4hvk_A 320 ACSSKTLQPSHVLMACGLKHEEAHGTLLLTL--GRYNTDEDVDRLLEVLPGVIERLRSM 376 (382)
T ss_dssp -------CCCHHHHHTTCCHHHHHTEEEEEC--CTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCcchHHHHHcCCChhhcCCeEEEEc--CCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 11100 037999999 68899999999999999998876643
No 16
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.95 E-value=8.9e-26 Score=228.67 Aligned_cols=316 Identities=11% Similarity=0.052 Sum_probs=219.3
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH--HHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS--MLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s--~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
.++|+|||+++..++.++.. +++.|+++..+|++ +...++..|. +++.+|.++++.+|+++
T Consensus 67 v~~~~sgt~al~~~~~~~~~--------------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~ 129 (411)
T 3nnk_A 67 MLVDGTSRAGIEAILVSAIR--------------PGDKVLVPVFGRFGHLLCEIARRCRA---EVHTIEVPWGEVFTPDQ 129 (411)
T ss_dssp EEEESCHHHHHHHHHHHHCC--------------TTCEEEEEECSHHHHHHHHHHHHTTC---EEEEEECCTTCCCCHHH
T ss_pred EEECCCcHHHHHHHHHHhcC--------------CCCEEEEecCCchHHHHHHHHHHcCC---eEEEEecCCCCCCCHHH
Confidence 67889999999988877632 66788999999988 8888888888 79999998899999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
|++++++. ++++|++++++|++|.+.|+++|.++|++||+++|+|++++.+..+.+.. .. .+|++++++
T Consensus 130 l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~-----~~-~~d~~~~s~ 198 (411)
T 3nnk_A 130 VEDAVKRI-----RPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLETD-----VW-GLDAVSAGM 198 (411)
T ss_dssp HHHHHHHH-----CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTT-----TT-TCSEEECCS
T ss_pred HHHHHhhC-----CCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchh-----cc-CCcEEEecC
Confidence 99999762 47899999999999999999999999999999999999998876543321 11 479999999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccC---CcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANAT---AATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~---~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
||++++|.|+|+++++++ ........ .+.|..... ..+ ........+.... .+....
T Consensus 199 ~K~l~~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~--~gg------~~~~~~~~~~~~~-----------~~~~~~ 258 (411)
T 3nnk_A 199 QKCLGGPSGTSPITLSAR-MEEAIRRRKCVEEGIRTDAH--RDG------DEEMIYSNYFDLG-----------MVMDYW 258 (411)
T ss_dssp TTTTCCCSSEEEEEECHH-HHHHHHTTCCCCGGGCCTTC--CCC------SSCCCSCSTTCHH-----------HHHHHH
T ss_pred ccccCCCCceEEEEECHH-HHHHHhhccccccccccccc--ccc------cCCCCcccccchH-----------HHHhhh
Confidence 999999999999998664 33322211 122221110 000 0000000000000 000000
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 319 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 319 (448)
..........+...+.++..+++....+|++++
T Consensus 259 -----------------------------------------------~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~ 291 (411)
T 3nnk_A 259 -----------------------------------------------GPERLNHHTEATTALFGARECARLILQEGLDYG 291 (411)
T ss_dssp -----------------------------------------------STTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred -----------------------------------------------ccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHH
Confidence 000011122334556667778888888899999
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEeccCCc---eeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEEEe
Q psy14299 320 VDNAVDCSRYFLSQISQRPGFRLVIPEFQ---CTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMIGY 395 (448)
Q Consensus 320 ~~~~~~l~~~~~~~L~~~pg~~l~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~~~ 395 (448)
.++..++++++.+.|+++ |++++ .++. ..++.|.+ |.+.+ ..++.+.|.++ | +.+.+
T Consensus 292 ~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~-~~~~~---------------~~~l~~~l~~~~g-i~v~~ 352 (411)
T 3nnk_A 292 IARHKLHGDALVKGIQAM-GLETF-GDLKHKMNNVLGVVI-PQGIN---------------GDQARKLMLEDFG-IEIGT 352 (411)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCCBC-SCGGGBCSSEEEEEC-CTTCC---------------HHHHHHHHHHHHS-EEEEE
T ss_pred HHHHHHHHHHHHHHHHHc-CCEeC-CCcccccccEEEEEC-CCCCC---------------HHHHHHHHHHhcC-eEEeC
Confidence 999999999999999998 88876 4332 34445543 32222 23788888877 8 55544
Q ss_pred eecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 396 QPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 396 ~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
+.. ...++++|++++ ++.++++|+++++++|+++.+++.
T Consensus 353 g~~--~~~~~~iRi~~~-~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 353 SFG--PLHGKVWRIGTM-GYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp CCG--GGTTTEEEEECC-GGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred ccC--CCCCCEEEEeCc-cCcCCHHHHHHHHHHHHHHHHHcC
Confidence 321 112369999985 456789999999999999988754
No 17
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.95 E-value=1.9e-25 Score=231.25 Aligned_cols=309 Identities=9% Similarity=0.029 Sum_probs=217.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHH----HHHHhCCCCCc--EEEEecCCCCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLK----AAHWLGIGMDN--VIRVKTNERGQ 77 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~----~~~~~g~~~~~--v~~v~~~~~g~ 77 (448)
..++|+|+|+++.+++.+..++ | .+++.|+++..+|++... .++..|..... +..+|.+.++.
T Consensus 130 ~v~~t~g~t~al~~~~~~~~~~--------~---~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~ 198 (465)
T 3e9k_A 130 EIALMNALTVNLHLLMLSFFKP--------T---PKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEET 198 (465)
T ss_dssp GEEECSCHHHHHHHHHHHHCCC--------C---SSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSS
T ss_pred CEEEECCHHHHHHHHHHHhccc--------c---CCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCc
Confidence 5789999999988887766442 1 245679999999998444 66667873211 34456667889
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccE
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
+|+++|+++|++. +.++++|++++++|++|.+.|+++|.++|++||+++++|+||+.+..+.+.... .+|+
T Consensus 199 ~d~~~l~~~i~~~---~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~------~~D~ 269 (465)
T 3e9k_A 199 LRIEDILEVIEKE---GDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDW------GVDF 269 (465)
T ss_dssp CCHHHHHHHHHHH---GGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH------TCCE
T ss_pred cCHHHHHHHHHhc---CCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhc------CCCE
Confidence 9999999999752 125889999999999999999999999999999999999999998876543211 4799
Q ss_pred EEECCcccc-CCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHH
Q psy14299 158 VSWNPHKML-GAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 236 (448)
Q Consensus 158 ~~~s~hK~l-~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~ 236 (448)
+++++||++ ++|.|+|+++++++ +.....+...+|...... ..+... .
T Consensus 270 ~~~s~~K~l~~gp~~~g~l~~~~~-~~~~~~~~~~g~~~~~~~---~~~~~~-~-------------------------- 318 (465)
T 3e9k_A 270 ACWCSYKYLNAGAGGIAGAFIHEK-HAHTIKPALVGWFGHELS---TRFKMD-N-------------------------- 318 (465)
T ss_dssp EEECSSSTTCCCTTCCCEEEECGG-GTTTSCCSSCCGGGBCHH---HHTTCC-S--------------------------
T ss_pred EEECcccccccCCCceEEEEEcHH-HHhhcCCcccCccCCCCC---cccccC-C--------------------------
Confidence 999999999 48989999999664 333222111111111000 000000 0
Q ss_pred HHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccc--cchhhHHHHHHHHHhcCc
Q psy14299 237 HFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCG--RKVDAFKLWLMWKARGNL 314 (448)
Q Consensus 237 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 314 (448)
...+......++++ +...+.++..+++.....
T Consensus 319 ----------------------------------------------~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~ 352 (465)
T 3e9k_A 319 ----------------------------------------------KLQLIPGVCGFRISNPPILLVCSLHASLEIFKQA 352 (465)
T ss_dssp ----------------------------------------------CCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------CcCcCCChHHhccCCccHHHHHHHHHHHHHHHHc
Confidence 00001111222222 256677778888888888
Q ss_pred cHHHHHHHHHHHHHHHHHHhhcC----------CCeEEeccCC----ceeeEEEEeeccCCCccccchhhhhhhhhhhHH
Q psy14299 315 GFRHFVDNAVDCSRYFLSQISQR----------PGFRLVIPEF----QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPR 380 (448)
Q Consensus 315 G~~~~~~~~~~l~~~~~~~L~~~----------pg~~l~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (448)
|++++.++..++++++.+.|+++ +|++++ .+. ..+.++|.+. .+. .+
T Consensus 353 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~-~p~~~~~~g~~~~~~~~-~~~-----------------~~ 413 (465)
T 3e9k_A 353 TMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNII-TPSHVEERGCQLTITFS-VPN-----------------KD 413 (465)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCC---------CEEEC-SCSSGGGBCSCEEEEEC-CTT-----------------CC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEe-CCCCHhhcccEEEEEec-CCH-----------------HH
Confidence 99999999999999999999986 799997 433 2667777653 111 15
Q ss_pred HHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 381 IKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 381 i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
+.+.|.++| +++.. .+ ++++|++++ +.++|++||++++++|+++.++.
T Consensus 414 l~~~L~~~G-i~v~~---~~---~~~iRis~~-~~~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 414 VFQELEKRG-VVCDK---RN---PNGIRVAPV-PLYNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp HHHHHHTTT-EECEE---ET---TTEEEEBCC-TTTCCHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHCC-EEEec---CC---CCEEEEeCc-ccCCCHHHHHHHHHHHHHHHHhc
Confidence 788899999 44432 22 279999986 68999999999999999988654
No 18
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.94 E-value=6e-25 Score=220.49 Aligned_cols=301 Identities=14% Similarity=0.108 Sum_probs=216.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH--HHHHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS--MLKAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s--~~~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
.+++|+|||+++..++.++.. +++.|+++..+|++ +...++..|. +++.++.++++.+|++
T Consensus 73 ~v~~~~g~t~a~~~~~~~l~~--------------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~ 135 (386)
T 2dr1_A 73 VLLVPSSGTGIMEASIRNGVS--------------KGGKVLVTIIGAFGKRYKEVVESNGR---KAVVLEYEPGKAVKPE 135 (386)
T ss_dssp EEEESSCHHHHHHHHHHHHSC--------------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTTCCCCHH
T ss_pred EEEEeCChHHHHHHHHHHhhc--------------CCCeEEEEcCCchhHHHHHHHHHhCC---ceEEEecCCCCCCCHH
Confidence 378999999999998877633 56678889999998 8888888888 7899999888899999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+|++++++. .++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+....+ +... .+|+++.|
T Consensus 136 ~l~~~l~~~----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~di~~~s 205 (386)
T 2dr1_A 136 DLDDALRKN----PDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIK-----FDKW-GLDVVFSS 205 (386)
T ss_dssp HHHHHHHHC----TTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCSEEEEE
T ss_pred HHHHHHhcC----CCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCcccc-----cccc-CCcEEEEe
Confidence 999999641 3578999999999999999999999999999999999999998765332 1112 47999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccC-CcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANAT-AATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
+||++++|.|+|+++++++ +....... ..++... +...++
T Consensus 206 ~sK~~~~~~g~G~~~~~~~-~~~~~~~~~~~~~~~~--------------------------------------~~~~~~ 246 (386)
T 2dr1_A 206 SQKAFGVPPGLAIGAFSER-FLEIAEKMPERGWYFD--------------------------------------IPLYVK 246 (386)
T ss_dssp TTSTTCCCSSCEEEEECHH-HHHHHTTCTTCCSTTC--------------------------------------HHHHHH
T ss_pred ccccccCCCceEEEEECHH-HHHHHhcCCCCceEEe--------------------------------------HHHHHH
Confidence 9999999988999998654 33332110 0011000 000000
Q ss_pred Hhh-hhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc-cHHH
Q psy14299 241 NAV-DCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL-GFRH 318 (448)
Q Consensus 241 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~ 318 (448)
... . .....+.+...+.++..+++..... |+++
T Consensus 247 ~~~~~---------------------------------------------~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~ 281 (386)
T 2dr1_A 247 YLKEK---------------------------------------------ESTPSTPPMPQVFGINVALRIIEKMGGKEK 281 (386)
T ss_dssp HHHHH---------------------------------------------SSCSSCCCHHHHHHHHHHHHHHHHTTCHHH
T ss_pred hhccC---------------------------------------------CCCCCCCCHHHHHHHHHHHHHHHHhcCHHH
Confidence 000 0 0000122334455566677777666 8999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccCC---ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEe
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPEF---QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGY 395 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~ 395 (448)
+.++..++++++.+.|+++ |++++ .+. ...++.|.+ |.+.+ ..++.+.|.++| +.+.+
T Consensus 282 ~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~-~~~~~---------------~~~~~~~l~~~g-i~v~~ 342 (386)
T 2dr1_A 282 WLEMYEKRAKMVREGVREI-GLDIL-AEPGHESPTITAVLT-PPGIK---------------GDEVYEAMRKRG-FELAK 342 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBS-SCTTCBCSSEEEEEC-CTTCC---------------HHHHHHHHHHTT-EECEE
T ss_pred HHHHHHHHHHHHHHHHHHc-CCeeC-cCccccCCceEEEEc-CCCCC---------------HHHHHHHHHHCC-eEEec
Confidence 9999999999999999998 88876 332 244555543 21211 237889999998 55544
Q ss_pred eecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHH
Q psy14299 396 QPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDL 438 (448)
Q Consensus 396 ~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~ 438 (448)
+.... .++++|+++ +.+++++|+++++++|+++.++++.
T Consensus 343 ~~~~~--~~~~iRi~~--~~~~~~~~i~~~~~~l~~~~~~~~~ 381 (386)
T 2dr1_A 343 GYGSV--KEKTFRIGH--MGYMKFEDIQEMLDNLREVINELKK 381 (386)
T ss_dssp CCGGG--TTTEEEEEC--CSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred Ccccc--CCCEEEEEC--CCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 33211 137999999 5789999999999999999887653
No 19
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.94 E-value=7.4e-26 Score=226.74 Aligned_cols=300 Identities=13% Similarity=0.083 Sum_probs=212.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH--HHHHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS--MLKAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s--~~~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
.+++|+|||+++. ++..+. .+++.|++++..|++ +...++..|. +++.++.++++.+|++
T Consensus 56 ~v~~~~g~t~al~-~~~~~~--------------~~gd~vi~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~ 117 (384)
T 3zrp_A 56 PLIIPGGGTSAME-SVTSLL--------------KPNDKILVVSNGVFGDRWEQIFKRYPV---NVKVLRPSPGDYVKPG 117 (384)
T ss_dssp EEEEESCHHHHHH-HGGGGC--------------CTTCEEEEECSSHHHHHHHHHHTTSSC---EEEEECCSTTCCCCHH
T ss_pred EEEEcCCcHHHHH-HHHhhc--------------CCCCEEEEecCCcchHHHHHHHHHcCC---cEEEecCCCCCCCCHH
Confidence 4799999999998 765432 266778888889976 5555566677 7999999989999999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+|++++++. ++++|++++++|++|.+.|+++|.++|++||+++++|++|+.+....+.. .. .+|+++++
T Consensus 118 ~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~-----~~-~~d~~~~s 186 (384)
T 3zrp_A 118 EVEEEVRKS-----EYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAE-----EW-NVDVYLTA 186 (384)
T ss_dssp HHHHHHHHS-----CEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTT-----TT-TCSEEEEE
T ss_pred HHHHHHHhC-----CCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccCcccccc-----cc-CCCEEEec
Confidence 999999762 48899999999999999999999999999999999999999776543321 11 47999999
Q ss_pred CccccCCCCceEEEEEeccchhhhh-ccC-CcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQA-NAT-AATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~-~~~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
+||++++|.|+|+++++++ ..... .+. ..++... ...+....
T Consensus 187 ~~K~~~~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~ 230 (384)
T 3zrp_A 187 SQKALGSAAGLGLLLLSPK-ALSILDSQNSIAGYYLD-----------------------------------LRNWLPVM 230 (384)
T ss_dssp TTSTTCCCSSEEEEEECHH-HHHHHHHCCCSCCSTTC-----------------------------------HHHHHHHH
T ss_pred CcccccCCCceEEEEECHH-HHHHhcCCCCCCccccc-----------------------------------HHHHHHHH
Confidence 9999999999999998664 33332 110 0111000 00000000
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCC-CCCccccccchhhHHHHHHHHHhcCccHHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDT-GDKSVQCGRKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
.. ++ . ....+...+...+.++..+++....+|+++
T Consensus 231 ~~-~~-------------------------------------------~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~ 266 (384)
T 3zrp_A 231 RG-AE-------------------------------------------EGKAAYFATPPVHVILQLAEAFRLIEKEGIEN 266 (384)
T ss_dssp HH-HH-------------------------------------------TTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred Hh-hc-------------------------------------------ccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 00 00 0 000011223445566667788878889999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccCC----ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEE
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPEF----QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIG 394 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~ 394 (448)
+.++..++++++.+.|+++ |++++ .++ ...++.|.+.. .+ ..++.+.|.++|+ .+.
T Consensus 267 ~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~--~~---------------~~~~~~~l~~~gi-~v~ 326 (384)
T 3zrp_A 267 RIKRHTMVASAIRAGLEAL-GLEIV-ARRPESYSNTVTGVILKV--AD---------------PQKVLAGTVNEGV-EFA 326 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBS-CSSGGGBCSSEEEEECSS--SC---------------HHHHHHHHHTTTC-CCE
T ss_pred HHHHHHHHHHHHHHHHHHC-CCeEc-cCcccccCccEEEEECCC--CC---------------HHHHHHHHHHCCE-EEe
Confidence 9999999999999999999 98876 433 13444454321 21 2378899999984 444
Q ss_pred eeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 395 YQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 395 ~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
++..... +++|+++ +.+++++|+++++++|+++.+++.
T Consensus 327 ~g~~~~~---~~iRi~~--~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 327 PGVHPAF---KYFRIGH--MGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp ECCCTTC---CEEEEEC--CSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCc---CEEEEec--cccCCHHHHHHHHHHHHHHHHHcC
Confidence 4332221 6899999 578999999999999999998765
No 20
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.94 E-value=5.1e-25 Score=223.53 Aligned_cols=302 Identities=15% Similarity=0.096 Sum_probs=210.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH----HHHHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS----MLKAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s----~~~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
.+++|+|||+++..++.++++... .+++.|+++..+|++ +...++..|. +++.++.++++.+|
T Consensus 92 ~v~~~~g~t~a~~~~~~~~~~~~~----------~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d 158 (420)
T 1t3i_A 92 EIVYTRNATEAINLVAYSWGMNNL----------KAGDEIITTVMEHHSNLVPWQMVAAKTGA---VLKFVQLDEQESFD 158 (420)
T ss_dssp GEEEESSHHHHHHHHHHHTHHHHC----------CTTCEEEEETTCCGGGTHHHHHHHHHHCC---EEEEECBCTTSSBC
T ss_pred eEEEcCChHHHHHHHHHHhhhccc----------CCCCEEEECcchhHHHHHHHHHHHHhcCc---EEEEeccCCCCCcC
Confidence 589999999999999887742100 256788999999998 5677778888 78999998889999
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+++|++++++ ++++|++++++|++|.+.|+++|.++|++||+++++|++|+.+....+.. .. ..|+++
T Consensus 159 ~~~l~~~l~~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~-----~~-~~di~~ 226 (420)
T 1t3i_A 159 LEHFKTLLSE------KTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQ-----LI-DCDWLV 226 (420)
T ss_dssp HHHHHHHCCT------TEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHH-----HH-TCSEEE
T ss_pred HHHHHHhhCC------CceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchh-----hc-CCCEEE
Confidence 9999999854 58899999999999999999999999999999999999999876533211 11 369999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCCcc--cccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATAAT--YLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~--y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
.|+|| +.+|.|+|++++++ ++.......... +..... . ....+.
T Consensus 227 ~s~sK-~~~~~g~G~~~~~~-~~~~~~~~~~~~~~~~~~~~------~--~~~~~~------------------------ 272 (420)
T 1t3i_A 227 ASGHK-MCAPTGIGFLYGKE-EILEAMPPFFGGGEMIAEVF------F--DHFTTG------------------------ 272 (420)
T ss_dssp EEGGG-TTSCTTCEEEEECH-HHHHHSCCCSCSTTSEEEEC------S--SCEEEC------------------------
T ss_pred Eehhh-hcCCCceEEEEEch-HHHhhcCceecCCCcccccc------c--cccCCC------------------------
Confidence 99999 45677899988865 333332211111 000000 0 000000
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccc-ccc-chhhHHHHHHHHHhcCcc
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQ-CGR-KVDAFKLWLMWKARGNLG 315 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~G 315 (448)
-....+. +.+ ...++++..+++.+...|
T Consensus 273 --------------------------------------------------~~~~~~~~~~~~~~~~~a~~~al~~~~~~~ 302 (420)
T 1t3i_A 273 --------------------------------------------------ELPHKFEAGTPAIAEAIALGAAVDYLTDLG 302 (420)
T ss_dssp --------------------------------------------------CTTGGGCCSSCCHHHHHHHHHHHHHHHHHC
T ss_pred --------------------------------------------------CchhhccCCCccHHHHHHHHHHHHHHHHhH
Confidence 0000000 111 122333334566666668
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEeccCC-----ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCc
Q psy14299 316 FRHFVDNAVDCSRYFLSQISQRPGFRLVIPEF-----QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGT 390 (448)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~-----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~ 390 (448)
++++.++..++++++.+.|+++||++++ .+. ..+++.|.+ + +.+ ..++.+.|.++|
T Consensus 303 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~~-~-~~~---------------~~~~~~~l~~~g- 363 (420)
T 1t3i_A 303 MENIHNYEVELTHYLWQGLGQIPQLRLY-GPNPKHGDRAALASFNV-A-GLH---------------ASDVATMVDQDG- 363 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTEEEE-SCCGGGSCBCSEEEEEE-T-TBC---------------HHHHHHHHHTTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEe-CCCccccccCCEEEEEE-C-CCC---------------HHHHHHHHHHCC-
Confidence 8899999999999999999999999987 443 366666653 2 111 136778888888
Q ss_pred EEEEeeec--------CCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 391 LMIGYQPL--------QHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 391 ~~~~~~~~--------~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
+.+.+... .+. ++++|+++ +.+++++|+++++++|+++.+.+.
T Consensus 364 i~v~~~~~~~~~~~~~~g~--~~~iRis~--~~~~~~~~i~~~~~~l~~~~~~~~ 414 (420)
T 1t3i_A 364 IAIRSGHHCTQPLHRLFDA--SGSARASL--YFYNTKEEIDLFLQSLQATIRFFS 414 (420)
T ss_dssp EECBCSCTTCHHHHHHTTC--CCCEEEEC--CTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred eEEeeccccchHHHHhcCC--CCeEEEec--CCCCCHHHHHHHHHHHHHHHHHhc
Confidence 55544311 121 37899999 678999999999999999987653
No 21
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.94 E-value=2.9e-25 Score=222.53 Aligned_cols=291 Identities=15% Similarity=0.181 Sum_probs=202.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHh---CCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWL---GIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~---g~~~~~v~~v~~~~~g~id~ 80 (448)
.+++|+|||+++.+++.+++..+. .+++.|+++..+|+++...+..+ |. +++.++.++++.+|+
T Consensus 62 ~v~~~~g~t~a~~~~~~~l~~~~~----------~~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~ 128 (382)
T 4eb5_A 62 TVVFTSGATEANNLAIIGYAMRNA----------RKGKHILVSAVEHMSVINPAKFLQKQGF---EVEYIPVGKYGEVDV 128 (382)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHG----------GGCCEEEEETTCCHHHHHHHHHHTTTTC---EEEEECBCTTSCBCH
T ss_pred eEEEcCchHHHHHHHHHHHHhhcc----------CCCCEEEECCCcchHHHHHHHHHHhCCc---EEEEeccCCCCccCH
Confidence 578999999999999888762100 15667999999999998888763 55 789999988899999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
++|++++++ ++++|++++++|++|.+.|+++|.++|++||++ |+|++|+.+..+.+. ... .+|+++.
T Consensus 129 ~~l~~~i~~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~-----~~~-~~di~~~ 195 (382)
T 4eb5_A 129 SFIDQKLRD------DTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDV-----EKI-GADMLTI 195 (382)
T ss_dssp HHHHHHCCT------TEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCH-----HHH-TCSEEEE
T ss_pred HHHHHHhcC------CCeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCc-----ccc-CCCEEEe
Confidence 999999854 478999999999999999999999999999999 999999976543321 111 3689999
Q ss_pred CCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
|+||+ ++|.|+|+++++++..+.. ++..... ......+..
T Consensus 196 s~sK~-~g~~g~G~~~~~~~~~l~~-------~~~~~~~---------~~~~~~~~~----------------------- 235 (382)
T 4eb5_A 196 SSNDI-YGPKGVGALWIRKEAKLQP-------VILGGGQ---------ENGLRSGSE----------------------- 235 (382)
T ss_dssp ETGGG-TCCSSCEEEEEETTCCCCC-------SSCSSCT---------GGGTSCSCC-----------------------
T ss_pred ehHHh-cCCCceEEEEEccccccCc-------eecCCCc---------cccccCCCc-----------------------
Confidence 99998 5688899999877521111 1100000 000000000
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
+...+.++..+++... +|++++.
T Consensus 236 --------------------------------------------------------~~~~~~~~~~al~~~~-~~~~~~~ 258 (382)
T 4eb5_A 236 --------------------------------------------------------NVPSIVGFGKAAEITA-MEWREEA 258 (382)
T ss_dssp --------------------------------------------------------CHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred --------------------------------------------------------cHHHHHHHHHHHHHHH-HhHHHHH
Confidence 0011112222333322 2677888
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEeccCCc---eeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 321 DNAVDCSRYFLSQISQRPGFRLVIPEFQ---CTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~~pg~~l~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
++..++++++.+.|+++||++++ .++. .+.+.|.+. +.+ ..++.+.|.++|+ .+.++.
T Consensus 259 ~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~---------------~~~~~~~l~~~gi-~v~~g~ 319 (382)
T 4eb5_A 259 ERLRRLRDRIIDNVLKIEESYLN-GHPEKRLPNNVNVRFS--YIE---------------GESIVLSLDMAGI-QASTGS 319 (382)
T ss_dssp HHHHHHHHHHHHHHTTSTTEEEC-SCSSSBCTTEEEEEET--TSC---------------HHHHHHHHHHHTC-BCBCCC
T ss_pred HHHHHHHHHHHHHHhhCCCeEEe-CCcccCCCCEEEEEeC--CcC---------------HHHHHHHHHHCCE-EEeccc
Confidence 99999999999999999999986 4321 345566542 221 2367888888884 444332
Q ss_pred cC--------------Cc---ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHH
Q psy14299 398 LQ--------------HR---NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDL 438 (448)
Q Consensus 398 ~~--------------g~---~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~ 438 (448)
.. |. ...+++|+++ +.+++++|+++++++|+++.+++..
T Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~--~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 320 ACSSKTLQPSHVLMACGLKHEEAHGTLLLTL--GRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp GGGTSSCCCCHHHHHTTCCHHHHTTEEEEEC--CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcccHHHHHcCCChhccCCeEEEEC--CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 10 10 0137999999 6889999999999999999887654
No 22
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.94 E-value=6.2e-25 Score=221.67 Aligned_cols=304 Identities=14% Similarity=0.117 Sum_probs=209.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH----HHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML----KAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~----~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
.++||+|||+++..++.++++... .+++.|+++..+|++.. ..++..|. +++.+|.++++.+|
T Consensus 87 ~v~~~~g~t~a~~~~~~~~~~~~~----------~~gd~vl~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~d 153 (406)
T 1kmj_A 87 ELVFVRGTTEGINLVANSWGNSNV----------RAGDNIIISQMEHHANIVPWQMLCARVGA---ELRVIPLNPDGTLQ 153 (406)
T ss_dssp GEEEESSHHHHHHHHHHHTHHHHC----------CTTCEEEEETTCCGGGTHHHHHHHHHHTC---EEEEECBCTTSCBC
T ss_pred eEEEeCChhHHHHHHHHHhhhhcC----------CCCCEEEEecccchHHHHHHHHHHHhCCC---EEEEEecCCCCCcC
Confidence 579999999999999887752100 25677889999998754 34666788 78899998889999
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+++|++++++ ++++|++++++|++|.+.|+++|.++|++||+++++|++|+.+..+.+. ... ..|+++
T Consensus 154 ~~~l~~~l~~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~-----~~~-~~d~~~ 221 (406)
T 1kmj_A 154 LETLPTLFDE------KTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDV-----QAL-DCDFYV 221 (406)
T ss_dssp GGGHHHHCCT------TEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCH-----HHH-TCSEEE
T ss_pred HHHHHHHhcc------CCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcc-----ccc-CCCEEE
Confidence 9999999854 5789999999999999999999999999999999999999987653321 111 369999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCCc--ccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATAA--TYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~--~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
.|+||++ +|.|+|++++++ ++......... .+...........+......+..+
T Consensus 222 ~s~~K~~-g~~G~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 277 (406)
T 1kmj_A 222 FSGHKLY-GPTGIGILYVKE-ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAG---------------------- 277 (406)
T ss_dssp EEGGGTT-SCTTCEEEEECH-HHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCS----------------------
T ss_pred EEchhcc-CCCCcEEEEEeH-HHHhhcCCcccCCCceeecccccccccCCCchhccCC----------------------
Confidence 9999988 677799998864 33333221110 000000000000000000000000
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
..+...+.++..+++.+...|++
T Consensus 278 ---------------------------------------------------------~~~~~~~~a~~~al~~~~~~~~~ 300 (406)
T 1kmj_A 278 ---------------------------------------------------------TPNTGGIIGLGAALEYVSALGLN 300 (406)
T ss_dssp ---------------------------------------------------------SCCHHHHHHHHHHHHHHHHHCHH
T ss_pred ---------------------------------------------------------CCCHHHHHHHHHHHHHHHHcCHH
Confidence 01112223333556666556888
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCC-ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEF-QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ 396 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~ 396 (448)
++.++..++++++.+.|+++||++++ .+. ..+++.|.+ + +.+ ..++.+.|.++| +.+.++
T Consensus 301 ~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~-~-~~~---------------~~~~~~~l~~~g-i~v~~g 361 (406)
T 1kmj_A 301 NIAEYEQNLMHYALSQLESVPDLTLY-GPQNRLGVIAFNL-G-KHH---------------AYDVGSFLDNYG-IAVRTG 361 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTEEEE-SCTTCCSEEEEEE-T-TCC---------------HHHHHHHHHHTT-EECEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEe-cCCCcCCEEEEEE-C-CCC---------------HHHHHHHHhhCC-cEEEec
Confidence 99999999999999999999999987 432 567777754 2 221 136778888898 445443
Q ss_pred ec--------CCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 397 PL--------QHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 397 ~~--------~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
.. .+ .++++|+++ +.++|++|+++++++|+++.+.+
T Consensus 362 ~~~~~~~~~~~g--~~~~iRis~--~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 362 HHCAMPLMAYYN--VPAMCRASL--AMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp CTTCHHHHHHTT--CSCEEEEEC--CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cccchHHHHhcC--CCCeEEEEe--ecCCCHHHHHHHHHHHHHHHHhh
Confidence 21 12 137999999 67899999999999999987653
No 23
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.94 E-value=4.5e-25 Score=219.37 Aligned_cols=300 Identities=13% Similarity=0.137 Sum_probs=207.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH-HHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS-MLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s-~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
.+++|+|||+++..++.+++.+ .+.+++.+...|.+ +...+...|. +++.++.++++.+|+++
T Consensus 58 ~v~~~~g~t~a~~~~~~~~~~~-------------gd~vi~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~ 121 (366)
T 1m32_A 58 SVLLQGSGSYAVEAVLGSALGP-------------QDKVLIVSNGAYGARMVEMAGLMGI---AHHAYDCGEVARPDVQA 121 (366)
T ss_dssp EEEEESCHHHHHHHHHHHSCCT-------------TCCEEEEESSHHHHHHHHHHHHHTC---CEEEEECCTTSCCCHHH
T ss_pred EEEEecChHHHHHHHHHHhcCC-------------CCeEEEEeCCCccHHHHHHHHHhCC---ceEEEeCCCCCCCCHHH
Confidence 4899999999999988776432 23345566688876 5677788888 78899998888999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
|++++++. .++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+..+.+ +... .+|+++.++
T Consensus 122 l~~~l~~~----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~-----~~~~-~~di~~~s~ 191 (366)
T 1m32_A 122 IDAILNAD----PTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMD-----IAAL-HIDYLISSA 191 (366)
T ss_dssp HHHHHHHC----TTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCC-----TTTT-TCSEEEEES
T ss_pred HHHHHhcC----CCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCcc-----cccc-CccEEEecC
Confidence 99999762 2467899999999999999999999999999999999999997765332 1111 379999999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
||++++|.|+|+++++++ +.........++..... ..| . ++..
T Consensus 192 ~K~~~~~~g~G~~~~~~~-~~~~~~~~~~~~~~~~~-----------------------~~~---~-----~~~~----- 234 (366)
T 1m32_A 192 NKCIQGVPGFAFVIAREQ-KLAACKGHSRSLSLDLY-----------------------AQW---R-----CMED----- 234 (366)
T ss_dssp SSTTCCCSSEEEEEEEHH-HHTTCTTCCSCSTTCHH-----------------------HHH---H-----HHHH-----
T ss_pred cccccCCCceEEEEECHH-HHHhhcCCCCCccccHH-----------------------HHH---h-----hhcc-----
Confidence 999999999999998764 33322111111111000 000 0 0000
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCcc-HHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG-FRHFVD 321 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~~~~~ 321 (448)
..+..-.+.+...+.++..+++.....| ++++.+
T Consensus 235 ---------------------------------------------~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~ 269 (366)
T 1m32_A 235 ---------------------------------------------NHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQ 269 (366)
T ss_dssp ---------------------------------------------TTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred ---------------------------------------------cCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHH
Confidence 0000000122233444555666665666 888999
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccC--Ccee-eEEEEeecc--CCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPE--FQCT-NICFWFIPV--SLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ 396 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~--~~~~-~v~f~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~ 396 (448)
+..++++++.+.|+++ |++++ .+ +..+ .+.|.+ +. +.. ..++.+.|.++| +.+.++
T Consensus 270 ~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~-~~~~~~~---------------~~~~~~~l~~~g-i~v~~~ 330 (366)
T 1m32_A 270 RYQQNQRSLVAGMRAL-GFNTL-LDDELHSPIITAFYS-PEDPQYR---------------FSEFYRRLKEQG-FVIYPG 330 (366)
T ss_dssp HHHHHHHHHHHHHHHT-TCCBS-SCGGGBCSSEEEEEC-CCCTTCC---------------HHHHHHHHHHTT-EECEEC
T ss_pred HHHHHHHHHHHHHHHC-CCeec-cCchhcCceEEEEEc-CccCCCC---------------HHHHHHHHHHCC-EEEECC
Confidence 9999999999999998 88875 43 2344 445543 21 111 237888999998 555544
Q ss_pred ecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 397 PLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 397 ~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
...+. +++|+++ +.+++++|+++++++|+++.++
T Consensus 331 ~~~~~---~~iRi~~--~~~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 331 KVSQS---DCFRIGN--IGEVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp CCSSS---CEEEEEC--CSSCCHHHHHHHHHHHHHHCTT
T ss_pred cCCCC---CEEEEec--CCCCCHHHHHHHHHHHHHHHHh
Confidence 33333 7999999 6789999999999999987653
No 24
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.94 E-value=2.7e-25 Score=225.47 Aligned_cols=316 Identities=14% Similarity=0.097 Sum_probs=214.0
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH--HHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS--MLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s--~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
++++|||+++..++.+... +++.|+++...|++ +...++..|. +++.++.++++.+|+++|
T Consensus 66 ~~~~s~t~al~~~~~~l~~--------------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l 128 (416)
T 3isl_A 66 PIDGTSRAGIEAVLASVIE--------------PEDDVLIPIYGRFGYLLTEIAERYGA---NVHMLECEWGTVFDPEDI 128 (416)
T ss_dssp EEESCHHHHHHHHHHHHCC--------------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTTCCCCHHHH
T ss_pred EecCcHHHHHHHHHHHhcC--------------CCCEEEEecCCcccHHHHHHHHhcCC---eeEEEecCCCCCCCHHHH
Confidence 4889999999888776522 67788889899998 7778888888 899999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++++++. ++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+....+.. .. .+|++++++|
T Consensus 129 ~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~-----~~-~~d~~~~s~~ 197 (416)
T 3isl_A 129 IREIKKV-----KPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVD-----EW-KIDAAIGGTQ 197 (416)
T ss_dssp HHHHHHH-----CCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTT-----TT-TCSEEECCSS
T ss_pred HHHHhhC-----CCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchh-----hc-CCCEEEecCc
Confidence 9999742 47899999999999999999999999999999999999998776644321 11 4799999999
Q ss_pred cccCCCCceEEEEEeccchhhhhccCC---cccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 164 KMLGAPLQCSILLIKEKGLLHQANATA---ATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 164 K~l~~P~g~G~l~vr~~~~~~~~~~~~---~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
||+++|.|+|+++++++ ......... .+|..... ..+..+.... ........ .+....
T Consensus 198 K~l~g~~g~g~~~~~~~-~~~~~~~~~~~~~Gw~~~~~----~~~~~gg~~~--~~~~~~~~-----------~~~~~~- 258 (416)
T 3isl_A 198 KCLSVPSGMAPITYNER-VADVIAARKKVERGIATQAD----RAALSGNRPI--TSNYFDLS-----------QLEDYW- 258 (416)
T ss_dssp STTCCCSSEEEEEECHH-HHHHHHTC----------------------CCCC--SCSTTCHH-----------HHHHHT-
T ss_pred cccCCCCCeEEEEECHH-HHHHhhcccccccccccccc----chhccCCCCC--CccccchH-----------HHHhhh-
Confidence 99999999999998664 333322111 11110000 0000000000 00000000 000000
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
..........+...+.++..+++.....|++++.
T Consensus 259 ----------------------------------------------~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 292 (416)
T 3isl_A 259 ----------------------------------------------SERRLNHHTEATTMLYALREGVRLVLEEGLETRF 292 (416)
T ss_dssp ----------------------------------------------STTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred ----------------------------------------------cccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHH
Confidence 0000011122345566667788888888999999
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEeccCCc---eeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEEEee
Q psy14299 321 DNAVDCSRYFLSQISQRPGFRLVIPEFQ---CTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMIGYQ 396 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~~pg~~l~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~~~~ 396 (448)
++..++++++.+.|+++ |++++ .++. ..++.|.+ |.+.+ ..++.+.|.++ | +.+.++
T Consensus 293 ~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~-~~~~~---------------~~~l~~~L~~~~g-i~v~~g 353 (416)
T 3isl_A 293 ERHRHHEAALAAGIKAM-GLRLF-GDDSCKMPVVTCVEI-PGGID---------------GESVRDMLLAQFG-IEIASS 353 (416)
T ss_dssp HHHHHHHHHHHHHHHHT-TCCBC-SCGGGBCTTEEEEEC-CTTCC---------------HHHHHHHHHHHHC-EECBCC
T ss_pred HHHHHHHHHHHHHHHHc-CCEec-cCccccCCcEEEEeC-CCCCC---------------HHHHHHHHHHhCC-EEEecC
Confidence 99999999999999996 98886 4332 34555543 22222 23788889887 8 555443
Q ss_pred ecCCcccccEEEEEecCCCCCCHHH-HHHHHHHHHHHHHHhH
Q psy14299 397 PLQHRNLHNFFRLVTTCHPASSRQD-MDYAIDQIELRGAEVD 437 (448)
Q Consensus 397 ~~~g~~~~~~lRis~~~~~~~t~ed-id~l~~al~~~~~~~~ 437 (448)
.. ...++++|+++ +.+++++| +++++++|+++.+++.
T Consensus 354 ~~--~~~~~~iRi~~--~~~~~~~e~i~~~~~~l~~~~~~~~ 391 (416)
T 3isl_A 354 FG--PLAGKIWRIGT--MGYSCRKENVLFVLAGLEAVLLRHN 391 (416)
T ss_dssp CS--TTTTTEEEEEC--CGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred CC--CCCCCEEEEec--ccCCCcHHHHHHHHHHHHHHHHHcC
Confidence 21 11237999999 45666666 9999999999988764
No 25
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.94 E-value=1.5e-24 Score=218.53 Aligned_cols=301 Identities=11% Similarity=0.049 Sum_probs=208.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHH--HHHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSM--LKAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~--~~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
.+++|+|||+++..++.++.. +++.|+++..+|++. ...++..|. +++.++.++++.+|++
T Consensus 61 ~v~~t~g~t~a~~~~~~~~~~--------------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~ 123 (392)
T 2z9v_A 61 PVILHGEPVLGLEAAAASLIS--------------PDDVVLNLASGVYGKGFGYWAKRYSP---HLLEIEVPYNEAIDPQ 123 (392)
T ss_dssp CEEESSCTHHHHHHHHHHHCC--------------TTCCEEEEESSHHHHHHHHHHHHHCS---CEEEEECCTTSCCCHH
T ss_pred EEEEeCCchHHHHHHHHHhcC--------------CCCEEEEecCCcccHHHHHHHHHcCC---ceEEeeCCCCCCCCHH
Confidence 578999999999998877632 556788888999886 344455687 7899999888899999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+|++++++. .++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+..+.+. ... .+|+++.|
T Consensus 124 ~l~~~l~~~----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~-----~~~-~~d~~~~s 193 (392)
T 2z9v_A 124 AVADMLKAH----PEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHP-----EDC-KADIYVTG 193 (392)
T ss_dssp HHHHHHHHC----TTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCG-----GGG-TCSEEEEC
T ss_pred HHHHHHhcC----CCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCccccc-----ccc-cceEEEec
Confidence 999999641 25789999999999999999999999999999999999999976654331 111 36999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCC--cc-cccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATA--AT-YLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~--~~-y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
+|||+++|.|+|+++++++ ......... ++ +....... ...+ +....
T Consensus 194 ~sK~~~~~~g~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~------~~~~--~~~~~--------------------- 243 (392)
T 2z9v_A 194 PNKCLGAPPGLTMMGVSER-AWAKMKANPLAPRASMLSIVDW------ENAW--SRDKP--------------------- 243 (392)
T ss_dssp SSSTTCCCSCCEEEEECHH-HHHHHHTCTTSCCSSTTCSGGG------TTTT--STTSC---------------------
T ss_pred CcccccCCCceeEEEECHH-HHHHhhhccCCCCceeccHHHH------Hhhh--cccCC---------------------
Confidence 9999999999999998654 333322110 10 11110000 0000 00000
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
.....+...+.++..+++.....|+++
T Consensus 244 -----------------------------------------------------~~~~~~~~~~~a~~~al~~~~~~g~~~ 270 (392)
T 2z9v_A 244 -----------------------------------------------------FPFTPSVSEINGLDVALDLYLNEGPEA 270 (392)
T ss_dssp -----------------------------------------------------CSSCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred -----------------------------------------------------CCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 000011222334445566666667889
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccCC----ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEE
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPEF----QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMI 393 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~ 393 (448)
+.++..++++++.+.|+++ |++++ .++ ..+++.|.+ |.+.+ ..++.+.|.++ | +.+
T Consensus 271 ~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~-~~~~~---------------~~~l~~~L~~~~g-i~v 331 (392)
T 2z9v_A 271 VWARHALTAKAMRAGVTAM-GLSVW-AASDSIASPTTTAVRT-PDGVD---------------EKALRQAARARYG-VVF 331 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBS-SSSGGGBCTTEEEEEC-CTTCC---------------HHHHHHHHHHHHC-EEC
T ss_pred HHHHHHHHHHHHHHHHHHc-CCeec-cCCccccCCceEEEEC-CCCCC---------------HHHHHHHHHhcCC-EEE
Confidence 9999999999999999998 88876 423 234455544 22221 23688889887 8 444
Q ss_pred Eeee-cCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 394 GYQP-LQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 394 ~~~~-~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
.++. ..+ ++++|+++. .++++++|+++++++|+++.+++.
T Consensus 332 ~~g~~~~~---~~~lRi~~~-~~~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 332 SSGRGETL---GKLTRIGHM-GPTAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp EECCGGGT---TTEEEEECC-GGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred ecCCCCCC---CCeEEEeCc-ccccCHHHHHHHHHHHHHHHHHcC
Confidence 4432 112 379999973 348899999999999999988765
No 26
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.93 E-value=8.1e-25 Score=216.79 Aligned_cols=291 Identities=13% Similarity=0.034 Sum_probs=204.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH--HHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML--KAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~--~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
.+++|+|||+++..++.++.. +++.|+++..+|++.. ..++..|. +++.++.++++.+|++
T Consensus 53 ~i~~~~g~t~a~~~~~~~~~~--------------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~ 115 (352)
T 1iug_A 53 VLILTGSGTLAMEALVKNLFA--------------PGERVLVPVYGKFSERFYEIALEAGL---VVERLDYPYGDTPRPE 115 (352)
T ss_dssp EEEEESCHHHHHHHHHHHHCC--------------TTCEEEEEECSHHHHHHHHHHHHTTC---EEEEEECCTTCCCCTT
T ss_pred eEEEcCchHHHHHHHHHhccC--------------CCCeEEEEeCCchhHHHHHHHHHcCC---ceEEEeCCCCCCCCHH
Confidence 578999999999998877633 5677888999999965 44455677 7899999888889998
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc--CCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY--DLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~--g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+|++ + ++++|++++++|++|.+.|+++|.++|++| |+++|+|++|+.+..+.+. ... .+|+++
T Consensus 116 ~l~~---~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~-----~~~-~~d~~~ 180 (352)
T 1iug_A 116 DVAK---E------GYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVAL-----EAM-GVDAAA 180 (352)
T ss_dssp TSCC---S------SCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCS-----GGG-TCSEEE
T ss_pred HHhc---c------CCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCcceec-----ccc-CeeEEE
Confidence 8876 2 477999999999999999999999999999 9999999999876554331 111 379999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
.++|||+++|.|+|+++++++ .+..... ..+... +...+
T Consensus 181 ~s~~K~~~~~~g~G~~~~~~~-~~~~~~~--~~~~~~--------------------------------------~~~~~ 219 (352)
T 1iug_A 181 SGSQKGLMCPPGLGFVALSPR-ALERLKP--RGYYLD--------------------------------------LAREL 219 (352)
T ss_dssp EESSSTTCCCSCEEEEEECHH-HHHTCCC--CSSTTC--------------------------------------HHHHH
T ss_pred ecCcccccCCCceeEEEECHH-HHHHhhC--CCceee--------------------------------------HHHHH
Confidence 999999999999999998654 3322211 111000 00000
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 319 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 319 (448)
... . ........+...+.++..+++..... ++++
T Consensus 220 ~~~-~--------------------------------------------~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~ 253 (352)
T 1iug_A 220 KAQ-K--------------------------------------------EGESAWTPAINLVLAVAAVLEEVLPR-LEEH 253 (352)
T ss_dssp HHH-T--------------------------------------------TTCCSSCCCHHHHHHHHHHHHHHGGG-HHHH
T ss_pred hhc-c--------------------------------------------cCCCCCCCCHHHHHHHHHHHHHHHHH-HHHH
Confidence 000 0 00000111233344455666665555 8889
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEeccCC-ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeec
Q psy14299 320 VDNAVDCSRYFLSQISQRPGFRLVIPEF-QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPL 398 (448)
Q Consensus 320 ~~~~~~l~~~~~~~L~~~pg~~l~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~ 398 (448)
.++..++++++.+.|+++ |++++ .+. ..+++.|.+ +.+.+ ..++.+.|.++| +.+.++..
T Consensus 254 ~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~-~~~~~---------------~~~~~~~l~~~g-i~v~~~~~ 314 (352)
T 1iug_A 254 LALKAWQNALLYGVGEEG-GLRPV-PKRFSPAVAAFYL-PEGVP---------------YARVKEAFAQRG-AVIAGGQG 314 (352)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCEES-CSSBCTTCEEEEC-CTTCC---------------HHHHHHHHHTTT-EECEECCG
T ss_pred HHHHHHHHHHHHHHHHHC-CCccc-ccccCCeEEEEEc-CCCCC---------------HHHHHHHHHHCC-EEEEeCCC
Confidence 999999999999999998 99986 433 345556654 21221 237888999998 55544331
Q ss_pred CCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 399 QHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 399 ~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
. ..++++|+++ +.+++++|+++++++|+++.+++
T Consensus 315 ~--~~~~~iRi~~--~~~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 315 P--LKGKVFRLSL--MGAYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp G--GTTTEEEECC--CSSCCHHHHHHHHHHHHHHHHHH
T ss_pred c--cCCCEEEEEc--cccCCHHHHHHHHHHHHHHHHHh
Confidence 1 1237999999 57889999999999999988754
No 27
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.93 E-value=3e-25 Score=220.52 Aligned_cols=292 Identities=13% Similarity=0.105 Sum_probs=202.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH--HHHHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS--MLKAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s--~~~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
.+++|+|||+++..++.+... + . +++....|++ +...++..|. +++.++.++++.+|++
T Consensus 63 ~v~~~~g~t~al~~~~~~l~~--------------~-~-~i~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~ 123 (362)
T 3ffr_A 63 EVLFLASATEIWERIIQNCVE--------------K-K-SFHCVNGSFSKRFYEFAGELGR---EAYKEEAAFGKGFYPA 123 (362)
T ss_dssp EEEEESCHHHHHHHHHHHHCS--------------S-E-EEEEECSHHHHHHHHHHHHTTC---EEEEEECCTTCCCCGG
T ss_pred EEEEeCCchHHHHHHHHhccC--------------C-c-EEEEcCcHHHHHHHHHHHHhCC---CeEEEecCCCCCCCHH
Confidence 488999999999888876542 4 3 3444456666 3456667777 7899999888999999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc-CCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY-DLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~-g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
+|+ +. .++++|++++++|++|.+.|+++|.++|++| |+++|+|++|+.+....+. ..+|+++.
T Consensus 124 ~l~--~~------~~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~--------~~~d~~~~ 187 (362)
T 3ffr_A 124 DIT--VP------ADAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDW--------TKIDSVFF 187 (362)
T ss_dssp GCC--CC------TTCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCT--------TSCSEEEE
T ss_pred HHh--cc------CCccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccCh--------hHCcEEEE
Confidence 998 32 3688999999999999999999999999999 9999999999877654321 12799999
Q ss_pred CCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
++||++++|.|+|+++++++ +.........+ ... ..+. + . +....+
T Consensus 188 s~~K~~~~~~G~g~~~~~~~-~~~~~~~~~~g---g~~---------~~~~------~-~--------------~~~~~~ 233 (362)
T 3ffr_A 188 SVQKCFGLPAGLGVWILNDR-VIEKSKALLAK---RKS---------IGTY------H-T--------------IPSMLE 233 (362)
T ss_dssp ETTSTTCCCSCCEEEEEEHH-HHHHHHHHHHT---TCC---------CCST------T-S--------------HHHHHH
T ss_pred ecccccCCCCceEEEEECHH-HHHHhhhcccc---CCC---------Cccc------c-c--------------HHHHHH
Confidence 99999999999999888664 33322111000 000 0000 0 0 000000
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
... ......+.+...+.++..+++++..+|++++.
T Consensus 234 ~~~---------------------------------------------~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~ 268 (362)
T 3ffr_A 234 KAR---------------------------------------------VNQTPETPNAMNIFLLGKVTGDMLQISADGIR 268 (362)
T ss_dssp HHT---------------------------------------------TTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred Hhh---------------------------------------------cCCCCCCchHHHHHHHHHHHHHHHHccHHHHH
Confidence 000 00011223344556667778877777899999
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEecc-CC---ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEee
Q psy14299 321 DNAVDCSRYFLSQISQRPGFRLVIP-EF---QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQ 396 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~~pg~~l~~~-~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~ 396 (448)
++..++++++.+.|+++||++++ . ++ ...++.|.+ |. + ..++.+.|.++| +.+.++
T Consensus 269 ~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~-~~--~---------------~~~~~~~l~~~g-i~~~~g 328 (362)
T 3ffr_A 269 KQTEEKAALINTYIESSKVFSFG-VEDAKLRSMTTIVANT-TM--L---------------PGEINKILEPFD-MAVGAG 328 (362)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEES-SSCGGGBCSSEEEEEE-SS--C---------------HHHHHHHHGGGT-EEEEEC
T ss_pred HHHHHHHHHHHHHHHHccCceec-cCChhhcCCceEEEec-CC--C---------------HHHHHHHHHHCC-eEEecC
Confidence 99999999999999999999987 4 21 234455543 21 1 237889999998 545443
Q ss_pred ecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHH
Q psy14299 397 PLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRG 433 (448)
Q Consensus 397 ~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~ 433 (448)
... ..++++|+++ +.+++++|+++++++|+++.
T Consensus 329 ~~~--~~~~~iRis~--~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 329 YGS--KKETQIRIAN--FPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp SGG--GTTTEEEEEC--CTTSCHHHHHHHHHHHHHHT
T ss_pred ccc--cCCCEEEEEC--CCCCCHHHHHHHHHHHHHHh
Confidence 211 1137999999 67899999999999998763
No 28
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.93 E-value=1.7e-25 Score=225.53 Aligned_cols=292 Identities=12% Similarity=-0.053 Sum_probs=199.7
Q ss_pred cEEE-eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 4 KPFL-LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 4 ~g~~-t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
..+| |.|||+++.+++.....+ .+++.+++....|.+. .+++.+......+..++.++++.+++++
T Consensus 78 evif~t~~~T~a~n~a~~~l~~~------------~~Gd~v~~~~~g~~~~-~~~~~a~~~G~~~~~~~~~~~~~~~~~~ 144 (377)
T 3e77_A 78 KVIFLQGGGCGQFSAVPLNLIGL------------KAGRCADYVVTGAWSA-KAAEEAKKFGTINIVHPKLGSYTKIPDP 144 (377)
T ss_dssp EEEEESSHHHHHHHHHHHHHGGG------------STTCEEEECCCSHHHH-HHHHHHTTTSEEEECSCCCSSSCSCCCG
T ss_pred eEEEEcCchHHHHHHHHHhccCC------------CCCCeEEEEECCHHHH-HHHHHHHHhCCceEEeccCCCcCCCCCh
Confidence 4788 589999988887665442 1345666666777764 3344332211156667877777778877
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
++..++ +++++|++++.+|.+|++.|+ +|+++|+++|||++++++..+++... .|.+++++
T Consensus 145 ~~~~i~------~~t~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~~--------~~~~~~s~ 205 (377)
T 3e77_A 145 STWNLN------PDASYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVSK--------FGVIFAGA 205 (377)
T ss_dssp GGCCCC------TTCSCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGGG--------CSEEEEEG
T ss_pred HHhccC------CCccEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCchhh--------cCEEEEec
Confidence 765553 357899999999999999999 57889999999999999999776432 25789999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
|||+ +|.|+|++++|++. +....+..+.|+.... ..+
T Consensus 206 ~K~~-gp~G~g~l~~~~~~-l~~~~~~~p~~~~~~~------------------------------------~~~----- 242 (377)
T 3e77_A 206 QKNV-GSAGVTVVIVRDDL-LGFALRECPSVLEYKV------------------------------------QAG----- 242 (377)
T ss_dssp GGTT-SCTTCEEEEEETTS-CSCCCTTSCGGGCHHH------------------------------------HHT-----
T ss_pred cccc-CCCccEEEEEcHHH-HhhccCCCCchhhHHH------------------------------------Hhh-----
Confidence 9999 59999999998864 3322111122211000 000
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc-cHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL-GFRHFVD 321 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~~ 321 (448)
......-++...++++..+++++.++ |++.+.+
T Consensus 243 ----------------------------------------------~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~ 276 (377)
T 3e77_A 243 ----------------------------------------------NSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEK 276 (377)
T ss_dssp ----------------------------------------------TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred ----------------------------------------------cCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 00001122356677888899999888 8999999
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccC--Ccee-eEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeec
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPE--FQCT-NICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPL 398 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~--~~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~ 398 (448)
+..++++++++.|+++||+.+...+ .+++ +++|.+.. +... . . +...+.+.|.++| +.+..+ .
T Consensus 277 ~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~--~~~~---~----~---~~~~~l~~l~~~G-i~~~~g-~ 342 (377)
T 3e77_A 277 LSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGN--AKGD---D----A---LEKRFLDKALELN-MLSLKG-H 342 (377)
T ss_dssp HHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESS--TTCC---H----H---HHHHHHHHHHHTT-EESCBC-C
T ss_pred HHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCC--CCCc---h----h---HHHHHHHHHHHCC-cEEeCC-C
Confidence 9999999999999999999865212 2344 57887632 2100 0 1 1135777777888 433222 2
Q ss_pred CCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 399 QHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 399 ~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
... +.+|+|+ +.++|+||||+|+++|+++.++
T Consensus 343 ~~~---g~iRiS~--~~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 343 RSV---GGIRASL--YNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp TTT---CSEEEEC--CTTSCHHHHHHHHHHHHHHHHH
T ss_pred CcC---CEEEEEC--CCCCCHHHHHHHHHHHHHHHHH
Confidence 222 5699999 6799999999999999999865
No 29
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.93 E-value=1.3e-24 Score=218.85 Aligned_cols=304 Identities=13% Similarity=0.135 Sum_probs=207.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHH--HHHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSM--LKAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~--~~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
.+++|+|||+++..++.++.. +++.|+++..+|++. ...++..|. +++.++.++++.+|++
T Consensus 72 ~i~~~~g~t~a~~~~~~~~~~--------------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~ 134 (393)
T 2huf_A 72 TFCLSASGHGGMEATLCNLLE--------------DGDVILIGHTGHWGDRSADMATRYGA---DVRVVKSKVGQSLSLD 134 (393)
T ss_dssp EEEESSCHHHHHHHHHHHHCC--------------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTTCCCCHH
T ss_pred EEEEcCcHHHHHHHHHHHHhC--------------CCCEEEEECCCcchHHHHHHHHHcCC---eeEEEeCCCCCCCCHH
Confidence 478999999999998877632 566788888899884 334455677 7899999888899999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+|++++++. ++++|++++++|++|.+.|+++|.++|++||+++|+|++++.+..+.+ +... .+|+++.+
T Consensus 135 ~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s 203 (393)
T 2huf_A 135 EIRDALLIH-----KPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMF-----MDRW-EIDAMYTG 203 (393)
T ss_dssp HHHHHHHHH-----CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCSEEECC
T ss_pred HHHHHHhcc-----CCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcc-----hhhc-CccEEEEC
Confidence 999999752 478999999999999999999999999999999999999987654332 1111 37999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccC---CcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANAT---AATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~---~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
+||++++|.|+|++++++ ++....... ..+|+.... ....
T Consensus 204 ~sK~l~g~~G~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~- 246 (393)
T 2huf_A 204 SQKVLGAPPGITPVSFSH-RAVERYKRRNTKVKVYYWDMS-----------------------------------LVGD- 246 (393)
T ss_dssp SSSTTCCCSSCEEEEECH-HHHHHHHTCSSCCSCGGGCHH-----------------------------------HHHH-
T ss_pred CCcccccCCCeEEEEECH-HHHHHHhhcCCCCceEEEchH-----------------------------------HHHh-
Confidence 999999999999998864 344333221 112111000 0000
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
++.. ...........+...+.++..+++....+|+++
T Consensus 247 ------------------------------------------~~~~-~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~ 283 (393)
T 2huf_A 247 ------------------------------------------YWGC-FGRPRIYHHTISSTLLYGLREAIAMACEEGLPA 283 (393)
T ss_dssp ------------------------------------------HTTC-SSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred ------------------------------------------hhcc-ccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHH
Confidence 0000 000000001112333444555666666668899
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccCC--cee-eEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEEE
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPEF--QCT-NICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMIG 394 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~~ 394 (448)
+.++..++++++.+.|+++ |++++ .++ ..+ ++.|.+ +.+.+ ..++.+.|.++ | +.+.
T Consensus 284 ~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~-~~~~~---------------~~~~~~~L~~~~g-i~v~ 344 (393)
T 2huf_A 284 LIARHEDCAKRLYRGLQDA-GFELY-ADPKDRLSTVTTIKV-PQGVD---------------WLKAAQYAMKTYL-VEIS 344 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBS-SCGGGBCTTEEEEEC-CTTCC---------------HHHHHHHHHHHHC-EECB
T ss_pred HHHHHHHHHHHHHHHHHHc-CCeec-cCccccCCcEEEEEc-CCCCC---------------HHHHHHHHHHhCC-EEEe
Confidence 9999999999999999998 88876 432 233 455543 21221 23678888765 8 5554
Q ss_pred eeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 395 YQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 395 ~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
++.... .++++|++++ ++.++++|+++++++|+++.+++.
T Consensus 345 ~g~~~~--~~~~~Ri~~~-~~~~~~e~i~~~~~~l~~~~~~~~ 384 (393)
T 2huf_A 345 GGLGPT--AGQVFRIGLM-GQNATTERVDRVLQVFQEAVAAVK 384 (393)
T ss_dssp CCCGGG--TTTEEEEECC-GGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred cCcccc--cCCEEEEEcc-cCcCCHHHHHHHHHHHHHHHHHcC
Confidence 332211 1379999994 234579999999999999987654
No 30
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.93 E-value=1.1e-24 Score=215.32 Aligned_cols=293 Identities=13% Similarity=0.087 Sum_probs=203.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHH--HHHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSM--LKAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~--~~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
.+++|+|||+++..++..++ + +.|+++..+|++. ...++..|. +++.+|.++++.+|++
T Consensus 54 ~v~~t~g~t~a~~~~~~~~~---------------~-d~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~ 114 (353)
T 2yrr_A 54 VAALAGSGSLGMEAGLANLD---------------R-GPVLVLVNGAFSQRVAEMAALHGL---DPEVLDFPPGEPVDPE 114 (353)
T ss_dssp EEEESSCHHHHHHHHHHTCS---------------C-CCEEEEECSHHHHHHHHHHHHTTC---CEEEEECCTTSCCCHH
T ss_pred eEEEcCCcHHHHHHHHHHhc---------------C-CcEEEEcCCCchHHHHHHHHHcCC---ceEEEeCCCCCCCCHH
Confidence 47899999999988875431 1 3477788889884 556677788 7999999888899999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+|++.+++. ++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+..+.+. ... .+|+++++
T Consensus 115 ~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~-----~~~-~~d~~~~s 183 (353)
T 2yrr_A 115 AVARALKRR-----RYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSM-----RAM-GVDYAFTG 183 (353)
T ss_dssp HHHHHHHHS-----CCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCH-----HHH-TCSEEECC
T ss_pred HHHHHHHhC-----CCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCcccccccccc-----ccc-CceEEEec
Confidence 999999751 4779999999999999999999999999999999999999866543321 111 36899999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+|||+++|.|+|+++++++ ....... .+.+..... .+.....
T Consensus 184 ~~K~~~~~~g~G~~~~~~~-~~~~l~~-~~~~~~~~~-----------------------------------~~~~~~~- 225 (353)
T 2yrr_A 184 SQKCLSAPPGLAPIAASLE-ARKAFTG-KRGWYLDLA-----------------------------------RVAEHWE- 225 (353)
T ss_dssp TTSTTCCCSSCEEEEECHH-HHHHCCC-CSCSTTCHH-----------------------------------HHHHHHT-
T ss_pred CcccccCCCceEEEEECHH-HHHHhcc-CCCccccHH-----------------------------------HHhhhhh-
Confidence 9999999999999998664 3332211 111110000 0000000
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
........+...+.++..+++.....|++++.+
T Consensus 226 -----------------------------------------------~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 258 (353)
T 2yrr_A 226 -----------------------------------------------RGGYHHTTPVLLHYALLEALDLVLEEGVAARER 258 (353)
T ss_dssp -----------------------------------------------TCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred -----------------------------------------------cCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 000000111233444455666666678899999
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCC--ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecC
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEF--QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQ 399 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~ 399 (448)
+..++++++.+.|+++ |++++ .++ ...++.|.+ |.+.+ ..++.+.|.++| +.+.++...
T Consensus 259 ~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~-~~~~~---------------~~~~~~~l~~~g-i~v~~g~~~ 319 (353)
T 2yrr_A 259 RAREVYAWVLEELKAR-GFRPY-PKASPLPTVLVVRP-PEGVD---------------ADRLVRALYAEG-VAVAGGIGP 319 (353)
T ss_dssp HHHHHHHHHHHHHHHT-TCEES-CSSSBCTTEEEEEC-CTTCC---------------HHHHHHHHHHTT-EECEECCGG
T ss_pred HHHHHHHHHHHHHHHC-CCccc-cCccCCCeEEEEEC-CCCCC---------------HHHHHHHHHHCC-EEEeCCccc
Confidence 9999999999999998 99987 433 233344543 22221 237888999998 444443211
Q ss_pred CcccccEEEEEecCCCCCCHHHHH-HHHHHHHHHHH
Q psy14299 400 HRNLHNFFRLVTTCHPASSRQDMD-YAIDQIELRGA 434 (448)
Q Consensus 400 g~~~~~~lRis~~~~~~~t~edid-~l~~al~~~~~ 434 (448)
. .++++|+++ +.+++++|++ +++++|+++.+
T Consensus 320 ~--~~~~iRi~~--~~~~~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 320 T--RGQVLRLGL--MGEGARREAYQAFLKALDRALA 351 (353)
T ss_dssp G--TTTCEEEEC--SGGGSCHHHHHHHHHHHHHHHH
T ss_pred c--CCCeEEEec--CccCCHHHHHHHHHHHHHHHHh
Confidence 1 136899999 5688999999 99999998764
No 31
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.93 E-value=6.8e-24 Score=215.99 Aligned_cols=292 Identities=13% Similarity=0.150 Sum_probs=202.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHh---CCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWL---GIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~---g~~~~~v~~v~~~~~g~id~ 80 (448)
.++||+|||+|+..++.++++... .+++.|+++..+|+++..++..+ |. +++.++.++++.+|+
T Consensus 87 ~v~~~~ggt~a~~~a~~~l~~~~~----------~~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~ 153 (423)
T 3lvm_A 87 EIVFTSGATESDNLAIKGAANFYQ----------KKGKHIITSKTEHKAVLDTCRQLEREGF---EVTYLAPQRNGIIDL 153 (423)
T ss_dssp GEEEESSHHHHHHHHHHHHHHHHT----------TTCCEEEEETTSCHHHHHHHHHHHHTTC---EEEEECCCTTSCCCH
T ss_pred eEEEeCChHHHHHHHHHHHHHhhc----------cCCCEEEECCccchHHHHHHHHHHHcCC---EEEEeccCCCCccCH
Confidence 589999999999999887765221 15678999999999998888655 77 799999999999999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
++|++++++ ++++|++++++|++|.+.|+++|.++|++||+++++|++++.+..+.+.. .. .+|++++
T Consensus 154 ~~l~~~i~~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~-----~~-~~di~~~ 221 (423)
T 3lvm_A 154 KELEAAMRD------DTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLS-----QL-KVDLMSF 221 (423)
T ss_dssp HHHHHHCCT------TEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTT-----TS-CCSEEEE
T ss_pred HHHHHhcCC------CcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChh-----hc-CCCEEEe
Confidence 999999964 57899999999999999999999999999999999999999876543321 11 4799999
Q ss_pred CCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
++||+ ++|.|+|+++++++. ..... .+...... ......+..
T Consensus 222 s~sK~-~g~~g~G~~~~~~~~-~~~~~----~~~~~~~~---------~~~~~~~~~----------------------- 263 (423)
T 3lvm_A 222 SGHKI-YGPKGIGALYVRRKP-RVRIE----AQMHGGGH---------ERGMRSGTL----------------------- 263 (423)
T ss_dssp ESTTT-TSCSSCEEEEECBTT-BCCCC----CSSCSSCT---------TTTTCCSCC-----------------------
T ss_pred chHHh-cCCCCeEEEEEeccc-cCCCC----ccccCCcc---------cccccCCCC-----------------------
Confidence 99995 557789999987642 22111 11110000 000000000
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
+.....++..+++..... ++++.
T Consensus 264 --------------------------------------------------------~~~~~~a~~~al~~~~~~-~~~~~ 286 (423)
T 3lvm_A 264 --------------------------------------------------------PVHQIVGMGEAYRIAKEE-MATEM 286 (423)
T ss_dssp --------------------------------------------------------CHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred --------------------------------------------------------CHHHHHHHHHHHHHHHHH-HHHHH
Confidence 011111222223322222 67788
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEeccCCc---eeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 321 DNAVDCSRYFLSQISQRPGFRLVIPEFQ---CTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~~pg~~l~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
++..++++++.+.|+++||++++ .++. .+.+.|.+. +.+ ..++.+.|.+ +.+.++.
T Consensus 287 ~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~---------------~~~l~~~l~~---i~v~~g~ 345 (423)
T 3lvm_A 287 ERLRGLRNRLWNGIKDIEEVYLN-GDLEHGAPNILNVSFN--YVE---------------GESLIMALKD---LAVSSGS 345 (423)
T ss_dssp HHHHHHHHHHHHHHTTSTTEEEE-SCSTTBCTTEEEEEET--TSC---------------HHHHHHHTTT---EECBCCC
T ss_pred HHHHHHHHHHHHHHhcCCCEEEe-CCccccCCCeEEEEeC--CCC---------------HHHHHHHHhh---heeccCc
Confidence 89999999999999999999987 4432 345666552 221 1256666655 3333321
Q ss_pred cC--------------Cc---ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHH
Q psy14299 398 LQ--------------HR---NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDL 438 (448)
Q Consensus 398 ~~--------------g~---~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~ 438 (448)
.. +. ..++++|+++ +..++++|+++++++|+++.+++..
T Consensus 346 ~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~--~~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 346 ACTSASLEPSYVLRALGLNDELAHSSIRFSL--GRFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp C-----CCCCHHHHHHTCCHHHHHTEEEEEC--CTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCCccccHHHHHhCCCccccCceEEEEC--CCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 10 00 0137899999 6789999999999999999887654
No 32
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.93 E-value=3.1e-24 Score=214.95 Aligned_cols=293 Identities=13% Similarity=0.044 Sum_probs=198.6
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHH--HHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSM--LKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~--~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
++|+|||+++..++.++.. +++.|+++...+++. ...+...|. ++..++.++++.+|+++|
T Consensus 75 ~~~~ggt~al~~~~~~~~~--------------~gd~vi~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l 137 (376)
T 3f0h_A 75 FMTCSSTGSMEAVVMNCFT--------------KKDKVLVIDGGSFGHRFVQLCEIHEI---PYVALKLEHGKKLTKEKL 137 (376)
T ss_dssp EESSCHHHHHHHHHHHHCC--------------TTCCEEEEESSHHHHHHHHHHHHTTC---CEEEEECCTTCCCCHHHH
T ss_pred EEcCChhHHHHHHHHhccC--------------CCCeEEEEeCChhhHHHHHHHHHcCC---ceEEEeCCCCCCCCHHHH
Confidence 4488999999888877643 455566665555543 245566677 788999988899999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++++++ ++++|++++++|++|.+.|+++|.++|++||+++++|++++.+....+.... .+|++++++|
T Consensus 138 ~~~~~~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~------~~d~~~~s~~ 205 (376)
T 3f0h_A 138 YEYDNQ------NFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNEC------GADVMITGSQ 205 (376)
T ss_dssp HTTTTS------CCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH------TCSEEEEETT
T ss_pred HHhhcc------CceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCcccccccc------CccEEEecCc
Confidence 987633 5789999999999999999999999999999999999999987654332111 3689999999
Q ss_pred cccCCCCceEEEEEeccchhhhhcc-CCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 164 KMLGAPLQCSILLIKEKGLLHQANA-TAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 164 K~l~~P~g~G~l~vr~~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
|++++|.|+|+++++++ ....... ...++..... .+.. ..
T Consensus 206 K~l~~~~G~g~~~~~~~-~~~~~~~~~~~~~~~~~~-----------------------------------~~~~---~~ 246 (376)
T 3f0h_A 206 KVLACPPGISVIVLAPR-GVERVEKSKVRTMYFDLK-----------------------------------DALK---NQ 246 (376)
T ss_dssp TTTCCCSSCEEEEECHH-HHHHHHTCCCCCSTTCHH-----------------------------------HHHH---HH
T ss_pred ccccCCCceEEEEECHH-HHHHhhcCCCCceeecHH-----------------------------------HHHh---hc
Confidence 99998999999888664 3333221 1111110000 0000 00
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc-cHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL-GFRHFVD 321 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~~ 321 (448)
.. ...........+.++..+++++..+ |++++.+
T Consensus 247 ~~---------------------------------------------~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 281 (376)
T 3f0h_A 247 ER---------------------------------------------GQTPFTPAVGILLQINERLKEIKKHGGADAEVA 281 (376)
T ss_dssp TT---------------------------------------------TCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred cc---------------------------------------------CCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 00 0000001111224455666666666 7999999
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEEEeeecCC
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMIGYQPLQH 400 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~~~~~~~g 400 (448)
+..++++++.+.|+++ ++++. .+.....+ +.+.+.+.+ ..++.+.|.++ | +.+.++. +
T Consensus 282 ~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~-~~~~~~~~~---------------~~~l~~~l~~~~g-i~v~~g~--~ 340 (376)
T 3f0h_A 282 RIASQAADFRAKIKDL-PFELV-SESPANGV-TSVHPTTAN---------------AYDIFLKLKDEYG-IWICPNG--G 340 (376)
T ss_dssp HHHHHHHHHHHHTTTS-SEEEC-CSSBBTTE-EEEEESSSC---------------HHHHHHHHHHHSS-EECEECC--G
T ss_pred HHHHHHHHHHHHHHHc-CCccC-ccccCceE-EEEeCCCCC---------------HHHHHHHHHHhCC-EEEecCc--c
Confidence 9999999999999998 78876 43333322 222233332 23788899988 7 5554432 1
Q ss_pred cccccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 401 RNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 401 ~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
...++++|+++ +.++|++|+++++++|+++.+
T Consensus 341 ~~~~~~lRis~--~~~~t~e~i~~~~~~l~~~l~ 372 (376)
T 3f0h_A 341 EMKDTIFRVGH--IGALTHEDNTTLVNAFKDLQK 372 (376)
T ss_dssp GGTTTCEEEEC--CSSCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEec--CCCCCHHHHHHHHHHHHHHHH
Confidence 11237999999 678999999999999998875
No 33
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.93 E-value=1.6e-24 Score=217.64 Aligned_cols=307 Identities=11% Similarity=0.099 Sum_probs=210.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH--HHHHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS--MLKAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s--~~~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
.+++|+|||+++..++.++.. +++.|+++...|++ +...++..|. +++.++.++++.+|++
T Consensus 76 ~v~~~~gg~~al~~~~~~~~~--------------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~d~~ 138 (393)
T 3kgw_A 76 TLVVSGSGHCAMETALFNLLE--------------PGDSFLTGTNGIWGMRAAEIADRIGA---RVHQMIKKPGEHYTLQ 138 (393)
T ss_dssp EEEESCCTTTHHHHHHHHHCC--------------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTTCCCCHH
T ss_pred EEEEeCCcHHHHHHHHHhcCC--------------CCCEEEEEeCCchhHHHHHHHHHcCC---ceEEEeCCCCCCCCHH
Confidence 378999999999888877633 56678888778763 4677778888 7899999888999999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+|++++++. ++++|++++++|++|.+.|+++|.++|++||+++++|++|+.+....+.. . ..+|+++++
T Consensus 139 ~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~-----~-~~~d~~~~s 207 (393)
T 3kgw_A 139 EVEEGLAQH-----KPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMD-----Q-QGIDIMYSS 207 (393)
T ss_dssp HHHHHHHHH-----CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTT-----T-TTCCEEEEE
T ss_pred HHHHHHhhC-----CCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccchh-----h-cCCCEEEec
Confidence 999999762 47899999999999999999999999999999999999998665433211 1 147999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+||++++|.|+|+++++++ ............. . . +.+ ...+...
T Consensus 208 ~sK~~~~~~g~g~~~~~~~-~~~~~~~~~~~~~---~----~---~~~----------------------~~~~~~~--- 251 (393)
T 3kgw_A 208 SQKVLNAPPGISLISFNDK-AKYKVYSRKTKPV---S----F---YTD----------------------ITYLAKL--- 251 (393)
T ss_dssp SSSTTCCCSSCEEEEECHH-HHHHHHTCSSCCS---C----S---TTC----------------------HHHHHHH---
T ss_pred CcccccCCCceeEEEECHH-HHHHHhccCCCCC---c----e---eec----------------------HHHHHHh---
Confidence 9999999999999998664 3333221111000 0 0 000 0000000
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
+.. ...........+...+.++..+++....+|++++.+
T Consensus 252 ----------------------------------------~~~-~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 290 (393)
T 3kgw_A 252 ----------------------------------------WGC-EGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWR 290 (393)
T ss_dssp ----------------------------------------TTC-SSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred ----------------------------------------hhh-ccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 000 000000111122344555666777777788999999
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCC---ceeeE-EEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEEEee
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEF---QCTNI-CFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMIGYQ 396 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~---~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~~~~ 396 (448)
+..++++++.+.|+++ |++++ .+. ..+.+ .|.+ |.+.+ ..++.+.|.++ | +.+.++
T Consensus 291 ~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~-~~~~~---------------~~~~~~~l~~~~g-i~v~~g 351 (393)
T 3kgw_A 291 RHREATAHLHKHLQEM-GLKFF-VKDPEIRLPTITTVTV-PAGYN---------------WRDIVSYVLDHFS-IEISGG 351 (393)
T ss_dssp HHHHHHHHHHHHHHHT-TCCBS-SSSGGGBCSSEEEEEC-CTTBC---------------HHHHHHHHHHHHC-EECBCC
T ss_pred HHHHHHHHHHHHHHHc-CCeec-cCChhhcCCeEEEEeC-CCCCC---------------HHHHHHHHHHhCC-EEEeCC
Confidence 9999999999999999 88875 322 22333 3433 22221 23788889887 8 555443
Q ss_pred ecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 397 PLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 397 ~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
... ..++++|++++ ++.++++|+++++++|+++.+++.
T Consensus 352 ~~~--~~~~~iRi~~~-~~~~~~~~i~~~~~~l~~~l~~~~ 389 (393)
T 3kgw_A 352 LGP--TEERVLRIGLL-GYNATTENVDRVAEALREALQHCP 389 (393)
T ss_dssp CGG--GTTTEEEEECC-GGGCCHHHHHHHHHHHHHHHHHSC
T ss_pred ccc--CCCCEEEEEec-ccCCCHHHHHHHHHHHHHHHHhhh
Confidence 211 12379999984 344699999999999999987654
No 34
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.93 E-value=5.9e-24 Score=213.51 Aligned_cols=297 Identities=13% Similarity=0.094 Sum_probs=206.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH----HHHhCCCCCcEEEEecC--CCCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA----AHWLGIGMDNVIRVKTN--ERGQ 77 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~----~~~~g~~~~~v~~v~~~--~~g~ 77 (448)
.+++|+|||+++..++.+++. .+++.|+++..+|.+...+ ++..|. +++.++.+ +++.
T Consensus 78 ~v~~~~g~t~a~~~~~~~~~~-------------~~gd~vl~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~ 141 (390)
T 1elu_A 78 TITITDNVTTGCDIVLWGLDW-------------HQGDEILLTDCEHPGIIAIVQAIAARFGI---TYRFFPVAATLNQG 141 (390)
T ss_dssp GEEEESSHHHHHHHHHHHSCC-------------CTTCEEEEETTCCHHHHHHHHHHHHHHCC---EEEEECCGGGSSSS
T ss_pred HEEEeCChHHHHHHHHhCCCC-------------CCCCEEEEecCcccHHHHHHHHHHHHhCc---EEEEEcCCCCCCcc
Confidence 579999999999888876531 1567789999999997654 566788 78889886 5788
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHH----HcCCEEEEecccccccccccchhhhhcCCC
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCE----KYDLWMHVDACWGGSLIFSEKYSFVLKGIN 153 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~----~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~ 153 (448)
+|+++|++++++ ++++|++++++|++|.+.|+++|.++|+ +||+++++|++|+.+..+.+. .. .
T Consensus 142 ~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~-----~~-~ 209 (390)
T 1elu_A 142 DAAAVLANHLGP------KTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDF-----SR-L 209 (390)
T ss_dssp CHHHHHHTTCCT------TEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCT-----TT-S
T ss_pred chHHHHHHhcCC------CceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCCh-----hh-c
Confidence 999999998854 5889999999999999999999999999 999999999999977553321 11 1
Q ss_pred CccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcc-cCCCCchhHHHHHHHHHhCh
Q psy14299 154 RANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSV-QCGRKVDAFKLWLMWKARGN 232 (448)
Q Consensus 154 ~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~ 232 (448)
..|+++.|+|||+++|.|+|+++++++ +.........++..... .++...+.+ +..++
T Consensus 210 ~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~--------------- 268 (390)
T 1elu_A 210 EVDYYAFTGHKWFAGPAGVGGLYIHGD-CLGEINPTYVGWRSITY-----GAKGEPTGWAEGGKR--------------- 268 (390)
T ss_dssp CCSEEEEESSSTTCCCTTCEEEEECTT-TGGGCCCCSCCTTTEEE-----CTTSCEEEECSGGGG---------------
T ss_pred CCCEEEccccccccCCCceEEEEECHH-hHhhcCCccccCCcccc-----cccCcccccccchHh---------------
Confidence 479999999999999999999998754 33332211111100000 000000000 00000
Q ss_pred HHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhc
Q psy14299 233 LGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARG 312 (448)
Q Consensus 233 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (448)
......+...+.++..+++.+.
T Consensus 269 ----------------------------------------------------------~~~~~~~~~~~~a~~~al~~l~ 290 (390)
T 1elu_A 269 ----------------------------------------------------------FEVATSAYPQYAGLLAALQLHQ 290 (390)
T ss_dssp ----------------------------------------------------------GCCSCCCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------hCCCCCCHHHHHHHHHHHHHHH
Confidence 0000111233344445566555
Q ss_pred Ccc-HHHHHHHHHHHHHHHHHHhhcCCCeEEecc--CCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCC
Q psy14299 313 NLG-FRHFVDNAVDCSRYFLSQISQRPGFRLVIP--EFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGG 389 (448)
Q Consensus 313 ~~G-~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g 389 (448)
.+| ++++.++..++++++.+.|+++||++++ . ++..+++.|.+ +.+.+ ..++.+.|.++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~-~~~~~---------------~~~~~~~l~~~g 353 (390)
T 1elu_A 291 RQGTAEERYQAICQRSEFLWRGLNQLPHVHCL-ATSAPQAGLVSFTV-DSPLG---------------HRAIVQKLEEQR 353 (390)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHHSTTEEES-CSSCCSSSEEEEEE-CSSSC---------------HHHHHHHHHHTT
T ss_pred HcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEe-cCccccccEEEEEc-CCCCC---------------HHHHHHHHHHCC
Confidence 555 8889999999999999999999999986 4 23566777754 22221 236888898888
Q ss_pred cEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy14299 390 TLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELR 432 (448)
Q Consensus 390 ~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~ 432 (448)
+.+.+.. +. +++|+++ +.+++++|+++++++|+++
T Consensus 354 -i~v~~~~--~~---~~iRis~--~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 354 -IYLRTIA--DP---DCIRACC--HYITDEEEINHLLARLADF 388 (390)
T ss_dssp -EECEEET--TT---TEEEEEC--CTTCCHHHHHHHHHHHTTC
T ss_pred -EEEEecC--CC---CeEEEec--ccCCCHHHHHHHHHHHHhh
Confidence 5554443 22 6899999 6889999999999999754
No 35
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.93 E-value=2.3e-24 Score=217.47 Aligned_cols=304 Identities=9% Similarity=0.042 Sum_probs=203.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHH--HHHHHHhCCCCCcEEEEecCCC------
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSM--LKAAHWLGIGMDNVIRVKTNER------ 75 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~--~~~~~~~g~~~~~v~~v~~~~~------ 75 (448)
..+||+|||+++..++.. .. +++.|++....|++. ...++..|++. +++.++.+.+
T Consensus 53 ~v~~~~sgt~a~~~~~~~-~~--------------~gd~vi~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~g~~~~~ 116 (379)
T 3ke3_A 53 AVIIPGSGTYGMEAVARQ-LT--------------IDEDCLIIRNGWFSYRWTQILEKGKFAK-SSTVLTAERTEDTEAP 116 (379)
T ss_dssp EEEEESCHHHHHHHHHHH-HC--------------TTCEEEEEECSHHHHHHHHHHHHHCCSS-EEEEEECEESSCCSSC
T ss_pred EEEEcCChhHHHHHHHHh-CC--------------CCCeEEEEeCCchhHHHHHHHHHhCCCC-ceEEEecccccccccc
Confidence 468899999998887643 22 456677777888764 34555566432 4667776432
Q ss_pred ---CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhh
Q psy14299 76 ---GQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVL 149 (448)
Q Consensus 76 ---g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~ 149 (448)
+.+|++++++++++. ++++|++++++|++|.+.| +++|+++||+||+++|+|++++ +..+.+....
T Consensus 117 ~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~~~~~~~~-- 188 (379)
T 3ke3_A 117 KPFAPVDIETAVAKIKED-----KSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCVWLDMKEL-- 188 (379)
T ss_dssp CCEECCCHHHHHHHHHHH-----TCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTCCCCHHHH--
T ss_pred CCCCCCCHHHHHHHHhhc-----CCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCcccccccc--
Confidence 368999999999642 4778999999999999999 9999999999999999999998 6544332111
Q ss_pred cCCCCccEEEECCccccCCCCceEEEEEeccchhhhhcc-CCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHH
Q psy14299 150 KGINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANA-TAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWK 228 (448)
Q Consensus 150 ~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (448)
.+|++++++||++++|.|+|+++++++ ....... ...++...
T Consensus 189 ----~~d~~~~s~~K~l~~~~g~g~~~~~~~-~~~~l~~~~~~~~~~~-------------------------------- 231 (379)
T 3ke3_A 189 ----GIDVLISAPQKGWSSTPCAGLVMLSAA-AIKKVESTESNCFSLD-------------------------------- 231 (379)
T ss_dssp ----TCSEEEECTTTTTCSCCCEEEEEECHH-HHHHHHTCCCSCSTTC--------------------------------
T ss_pred ----CCCEEEecchhhcCCCCceEEEEECHH-HHHhhhcCCCCceeec--------------------------------
Confidence 479999999999999999999999765 3333321 11111110
Q ss_pred HhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcc-ccccchhhHHHHHH
Q psy14299 229 ARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSV-QCGRKVDAFKLWLM 307 (448)
Q Consensus 229 ~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 307 (448)
...++...+.... +.+.+ ...+...+.++..+
T Consensus 232 ---~~~~~~~~~~~~~--------------------------------------------g~~~~~~t~~~~~~~a~~aa 264 (379)
T 3ke3_A 232 ---LKQWLTIMRAYEN--------------------------------------------GGHAYHATMPTDSLRQFRDA 264 (379)
T ss_dssp ---HHHHHHHHHHHHT--------------------------------------------TSCCCSSCCCHHHHHHHHHH
T ss_pred ---HHHHHHHHHhhhc--------------------------------------------cCCCCCCCCCHHHHHHHHHH
Confidence 0011111100000 00001 12334556667788
Q ss_pred HHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCC--ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHH
Q psy14299 308 WKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEF--QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKL 385 (448)
Q Consensus 308 ~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L 385 (448)
++.+..+|++++.++..++++++++.|+++ |++++ .++ ..+.+.... +++.. ..+.+.|
T Consensus 265 l~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~-~~~~~~~~~i~~~~-~~~~~----------------~~~~~~L 325 (379)
T 3ke3_A 265 ILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESV-AAEGFEAPGVVVSY-TERDD----------------MHKGSAF 325 (379)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-BCTTCBCSSEEEEE-CSCHH----------------HHSSHHH
T ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEec-CCccccCceEEEEc-cCCcc----------------hHHHHHH
Confidence 888888899999999999999999999998 88886 433 244443322 11100 0124667
Q ss_pred HhCCcEEEEeeecCC---cccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 386 VLGGTLMIGYQPLQH---RNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 386 ~~~g~~~~~~~~~~g---~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
.++|+. +.++.... ...++++|+|+ +.++|++||++++++|+++.+++.
T Consensus 326 ~~~Gi~-v~~g~~~~~~~~~~~~~lRis~--~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 326 AEAGLQ-IAAGVPLKVGEPDNFKTFRLGL--FGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp HHTTCC-CEECCCCSSCCCTTCCEEEEEC--CSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHCCeE-EeCCccccccccCcCCEEEEeC--CcCCCHHHHHHHHHHHHHHHHHhc
Confidence 788844 44432110 00137999999 578999999999999999987764
No 36
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.93 E-value=1.6e-23 Score=209.65 Aligned_cols=290 Identities=14% Similarity=0.171 Sum_probs=198.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH---HHhCCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA---HWLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~---~~~g~~~~~v~~v~~~~~g~id~ 80 (448)
.+++|+|||+++..++.+++.... .+++.|+++..+|+++...+ +..|. +++.+|.++++.+|+
T Consensus 63 ~v~~~~g~t~a~~~~~~~~~~~~~----------~~gd~vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~ 129 (384)
T 1eg5_A 63 EIFFTSCATESINWILKTVAETFE----------KRKRTIITTPIEHKAVLETMKYLSMKGF---KVKYVPVDSRGVVKL 129 (384)
T ss_dssp GEEEESCHHHHHHHHHHHHHHHTT----------TTCCEEEECTTSCHHHHHHHHHHHHTTC---EEEECCBCTTSCBCH
T ss_pred eEEEECCHHHHHHHHHHhhhhhcc----------CCCCEEEECCCCchHHHHHHHHHHhcCC---EEEEEccCCCCccCH
Confidence 589999999999999888773100 15678999999999987776 55677 788999988899999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcC--CEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYD--LWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g--~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
++|++++++ ++++|++++++|++|.+.|+++|.++|++|| +++|+|++|+.+..+.+ +... .+|++
T Consensus 130 ~~l~~~i~~------~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~-----~~~~-~~di~ 197 (384)
T 1eg5_A 130 EELEKLVDE------DTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFS-----LEKL-EVDYA 197 (384)
T ss_dssp HHHHHHCCT------TEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCC-----CTTT-CCSEE
T ss_pred HHHHHHhCC------CCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccC-----chhc-CCCEE
Confidence 999999854 4889999999999999999999999999999 99999999986543322 1222 47999
Q ss_pred EECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 159 SWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 159 ~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
++|+||++ +|.|+|+++++++..+.. .+..... . ... ...+..
T Consensus 198 ~~s~sK~~-g~~G~G~~~~~~~~~~~~-------~~~~~~~----~---~~~-~~~~~~--------------------- 240 (384)
T 1eg5_A 198 SFSAHKFH-GPKGVGITYIRKGVPIRP-------LIHGGGQ----E---RGL-RSGTQN--------------------- 240 (384)
T ss_dssp EEEGGGGT-SCTTCEEEEECTTSCCCC-------SBCSSCT----T---TTT-BCSCCC---------------------
T ss_pred EecHHHhc-CCCceEEEEEcCCCcccc-------ccccCcc----c---ccc-cCCCCC---------------------
Confidence 99999985 566799998866420111 1100000 0 000 000000
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
.+.+..+..+++.. .+++++
T Consensus 241 -----------------------------------------------------------~~~~~a~~~al~~~-~~~~~~ 260 (384)
T 1eg5_A 241 -----------------------------------------------------------VPGIVGAARAMEIA-VEELSE 260 (384)
T ss_dssp -----------------------------------------------------------HHHHHHHHHHHHHH-HHTHHH
T ss_pred -----------------------------------------------------------hHHHHHHHHHHHHH-HHhHHH
Confidence 11111122233321 135677
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccCCc---eeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEe
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPEFQ---CTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGY 395 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~ 395 (448)
+.++..++++++.+.|++ +|++++ .++. ...+.|.+. +.+ ..++.+.|.++| +.+.+
T Consensus 261 ~~~~~~~~~~~l~~~L~~-~g~~~~-~~~~~~~~~~~~~~~~--~~~---------------~~~~~~~l~~~g-i~v~~ 320 (384)
T 1eg5_A 261 AAKHMEKLRSKLVSGLMN-LGAHII-TPLEISLPNTLSVSFP--NIR---------------GSTLQNLLSGYG-IYVST 320 (384)
T ss_dssp HHHHHHHHHHHHHHHHHT-TTCEEC-SCTTSBCTTEEEEECT--TCC---------------HHHHHHHHHHTT-EECBC
T ss_pred HHHHHHHHHHHHHHHhCC-CCeEEe-CCcccCCCCEEEEEeC--CCC---------------HHHHHHHHhhCC-eEEec
Confidence 888899999999999999 699986 4321 234555432 111 236788888888 54444
Q ss_pred eecC--------------Cc---ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 396 QPLQ--------------HR---NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 396 ~~~~--------------g~---~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
+... |. ...+++|+++ +.+++++|+++++++|+++.+++.
T Consensus 321 g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~--~~~~~~~~i~~~~~~l~~~~~~~~ 377 (384)
T 1eg5_A 321 SSACTSKDERLRHVLDAMGVDRRIAQGAIRISL--CKYNTEEEVDYFLKKIEEILSFLD 377 (384)
T ss_dssp ------------CHHHHTTCCHHHHHHEEEEEC--CTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred cccccCCCCcchHHHHHcCCChhhcCCeEEEEC--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2211 10 0137999999 678999999999999999987654
No 37
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.93 E-value=4.6e-24 Score=215.14 Aligned_cols=296 Identities=13% Similarity=0.125 Sum_probs=210.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH--HHHHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS--MLKAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s--~~~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
.+++|+|||+++..++.++.. +++.|+++...|++ +...++..|. +++.+|.++++.+|++
T Consensus 87 ~v~~t~g~t~al~~~~~~~~~--------------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~ 149 (393)
T 1vjo_A 87 TIAVSGTGTAAMEATIANAVE--------------PGDVVLIGVAGYFGNRLVDMAGRYGA---DVRTISKPWGEVFSLE 149 (393)
T ss_dssp EEEESSCHHHHHHHHHHHHCC--------------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTTCCCCHH
T ss_pred EEEEeCchHHHHHHHHHhccC--------------CCCEEEEEcCChhHHHHHHHHHHcCC---ceEEEecCCCCCCCHH
Confidence 489999999999998877643 56678888899998 8888888888 7899999888899999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+|++++++. ++++|++++++|++|.+.|+++|.++|++||+++++|++|+.+..+.+ +... .+|+++.+
T Consensus 150 ~l~~~l~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~~-~~di~~~s 218 (393)
T 1vjo_A 150 ELRTALETH-----RPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIF-----LDAW-GVDLAYSC 218 (393)
T ss_dssp HHHHHHHHH-----CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCC-----TTTT-TCSEEECC
T ss_pred HHHHHHhhC-----CceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCc-----cccc-CccEEEEc
Confidence 999999752 367999999999999999999999999999999999999996654322 1122 47999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCC---cccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATA---ATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~---~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
+||++++|.++|+++++++ ......... .++... .. | ..++..
T Consensus 219 ~sK~l~~~~~~G~l~~~~~-~~~~~~~~~~~~~~~~~~------------------------~~-~-------~~~~~~- 264 (393)
T 1vjo_A 219 SQKGLGCSPGASPFTMSSR-AIEKLQRRRTKVANWYLD------------------------MN-L-------LGKYWG- 264 (393)
T ss_dssp SSSTTCSCSSCEEEEECHH-HHHHHHTCSSCCSCSTTC------------------------HH-H-------HHHHHS-
T ss_pred CcccccCCCceEEEEECHH-HHHHHhccCCCCCceecC------------------------cH-h-------hhhhhc-
Confidence 9999999999999998664 333321100 011100 00 0 000000
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccc-cccchhhHHHHHHHHHhcCccHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQ-CGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
..+... +.+.+.+.++..+++....+|++
T Consensus 265 --------------------------------------------------~~~~~~g~~~~~~~~a~~~al~~~~~~~~~ 294 (393)
T 1vjo_A 265 --------------------------------------------------SERVYHHTAPINLYYALREALRLIAQEGLA 294 (393)
T ss_dssp --------------------------------------------------TTCCCCSCCCHHHHHHHHHHHHHHHHHCHH
T ss_pred --------------------------------------------------cCCCCCCCCCHHHHHHHHHHHHHHHHccHH
Confidence 000011 23345556666777776667899
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCCc---eeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEE
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEFQ---CTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMI 393 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~ 393 (448)
++.++..++++++.+.|+++ |++++ .+.. .+++.|.+ |.+.+ ..++.+.|.++ | +.+
T Consensus 295 ~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~-~~~~~---------------~~~~~~~l~~~~g-i~v 355 (393)
T 1vjo_A 295 NCWQRHQKNVEYLWERLEDI-GLSLH-VEKEYRLPTLTTVCI-PDGVD---------------GKAVARRLLNEHN-IEV 355 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCCBS-SCGGGBCSSEEEEEC-CTTCC---------------HHHHHHHHHHHHC-EEC
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCccc-CCccccCCcEEEEEc-CCCCC---------------HHHHHHHHHhhCC-EEE
Confidence 99999999999999999998 88876 4322 23445543 22221 23788889887 8 444
Q ss_pred EeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHH
Q psy14299 394 GYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRG 433 (448)
Q Consensus 394 ~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~ 433 (448)
.++.... .++++|+++. .+.++++++++++++|+++.
T Consensus 356 ~~g~~~~--~~~~iRis~~-~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 356 GGGLGEL--AGKVWRVGLM-GFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp EECCGGG--TTTEEEEECC-GGGCSHHHHHHHHHHHHHHH
T ss_pred ecCcccc--CCCEEEEeCC-ccCChHHHHHHHHHHHHHHh
Confidence 4433211 1379999963 34567888999999998764
No 38
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.92 E-value=1.1e-23 Score=219.03 Aligned_cols=310 Identities=14% Similarity=0.152 Sum_probs=205.6
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
...++|+|||+++..++.+++.... +.|-. ..+..|+++..+|.++..+++..|+ +++.+|.++++.+|+++
T Consensus 124 ~~~~~~~ggt~a~~~al~~~~~~~~----~~Gd~-~~r~~Vlv~~~~h~~~~~~~~~~G~---~vv~v~~~~~~~~d~~~ 195 (474)
T 1wyu_B 124 AITLEPAAGAHGELTGILIIRAYHE----DRGEG-RTRRVVLVPDSAHGSNPATASMAGY---QVREIPSGPEGEVDLEA 195 (474)
T ss_dssp EEECCCSSHHHHHHHHHHHHHHHHH----HTTCT-TTCCEEEEETTSCTHHHHHHHHTTC---EEEEECBCTTSSBCHHH
T ss_pred ceeecChHHHHHHHHHHHHHHHHHH----hcCCc-cCCCEEEEeCCcChhhHHHHHHCCC---EEEEecCCCCCCcCHHH
Confidence 3456889999999998877764210 01210 0233788899999999999999998 89999998899999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccc-cCHHHHHHHHHHcCCEEEEecccccccc-cccchhhhhcCCCCccEEEE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAF-DPLDEIATVCEKYDLWMHVDACWGGSLI-FSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~-~~l~~I~~ia~~~g~~l~VD~A~~~~~~-~~~~~~~~~~~~~~aD~~~~ 160 (448)
|++++++ ++++|+++++ |++|.+ +|+++|+++|++||+++|+|++|+.+.. ..+. .. . .+|++++
T Consensus 196 L~~~i~~------~t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~--~~---~-g~di~~~ 262 (474)
T 1wyu_B 196 LKRELGP------HVAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARP--GD---M-GFDVVHL 262 (474)
T ss_dssp HHHHCST------TEEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCH--HH---H-TCSEEEC
T ss_pred HHHhhCC------CceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCc--cc---C-CCcEEEE
Confidence 9999954 4788888887 469998 7999999999999999999999976653 1111 11 1 3799999
Q ss_pred CCccccCCCC-----ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHH
Q psy14299 161 NPHKMLGAPL-----QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 235 (448)
Q Consensus 161 s~hK~l~~P~-----g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ 235 (448)
|+||++++|. ++|+++++++ +..... ..++......+ ..++.. .+..+++.
T Consensus 263 s~~K~~~~p~g~gG~~~G~~~~~~~-l~~~l~---~~~~~~~g~~~--~~~~~~--~~~~~~~~---------------- 318 (474)
T 1wyu_B 263 NLHKTFTVPHGGGGPGSGPVGVKAH-LAPYLP---VPLVERGEEGF--YLDFDR--PKSIGRVR---------------- 318 (474)
T ss_dssp CTTTTTCCCCTTSCCCCCCEEECGG-GGGGCC---SCEEEECSSCE--EEECCC--TTCCCCSS----------------
T ss_pred eCccccccCCCCCCCCeEEEEEcHH-HHHhCC---CCeeeccCCee--EecccC--cccCcccc----------------
Confidence 9999999995 6899998764 333221 01111000000 000000 00000100
Q ss_pred HHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCcc
Q psy14299 236 RHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 315 (448)
Q Consensus 236 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 315 (448)
-.|.+...+.+.+..++..+.+|
T Consensus 319 ---------------------------------------------------------~~~~~~~~~~aa~~~l~~~g~~~ 341 (474)
T 1wyu_B 319 ---------------------------------------------------------SFYGNFLALVRAWAYIRTLGLEG 341 (474)
T ss_dssp ---------------------------------------------------------STTSCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------cCcCcHHHHHHHHHHHHHHHHHH
Confidence 00122223344455566667788
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEe
Q psy14299 316 FRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGY 395 (448)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~ 395 (448)
++++.++..++++++.+.|+++ |+++....+....+.+.+ +.+.. ..++.+.|.++|+. + +
T Consensus 342 l~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~~~~~---------------~~~l~~~L~~~Gi~-~-~ 402 (474)
T 1wyu_B 342 LKKAAALAVLNARYLKELLKEK-GYRVPYDGPSMHEFVAQP-PEGFR---------------ALDLAKGLLELGFH-P-P 402 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCBCSSCSSCCSCEEEBC-STTCC---------------HHHHHHHHHHTTCC-C-C
T ss_pred HHHHHHHHHHHHHHHHHHHhhc-CcEecCCCCcceEEEEEc-CCCCC---------------HHHHHHHHHHCCcc-c-c
Confidence 8888999999999999999998 888741222222233322 21111 23788899999854 3 2
Q ss_pred eecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 396 QPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 396 ~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
....+...++++|+++ +.++|++|+++++++|+++.++
T Consensus 403 ~~~~~~~~~~~lRis~--~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 403 TVYFPLIVKEALMVEP--TETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp EESCSTTSTTCEEECC--CTTSCHHHHHHHHHHHHHHHTS
T ss_pred ccccccccCCEEEEEe--ecCCCHHHHHHHHHHHHHHHHh
Confidence 2221111137899999 5788999999999999998765
No 39
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.92 E-value=7.7e-24 Score=213.51 Aligned_cols=304 Identities=12% Similarity=0.125 Sum_probs=210.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH--HHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML--KAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~--~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
.+++|+|||+++..++.++.. +++.|+++..+|.+.. ..++..|. +++.++.++++.+|++
T Consensus 71 ~v~~~~g~t~al~~~~~~~~~--------------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~ 133 (396)
T 2ch1_A 71 TMCVSGSAHAGMEAMLSNLLE--------------EGDRVLIAVNGIWAERAVEMSERYGA---DVRTIEGPPDRPFSLE 133 (396)
T ss_dssp EEEESSCHHHHHHHHHHHHCC--------------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTTSCCCHH
T ss_pred EEEECCcHHHHHHHHHHHhcC--------------CCCeEEEEcCCcccHHHHHHHHHcCC---ceEEecCCCCCCCCHH
Confidence 478999999999988877633 5667888889999874 46777888 7899999888899999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+|++++++. ++++|++++++|++|.+.|+++|.++|++||+++++|++|+.+..+.+ +... .+|+++.+
T Consensus 134 ~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~~-~~d~~~~s 202 (396)
T 2ch1_A 134 TLARAIELH-----QPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFY-----MDKW-EIDAVYTG 202 (396)
T ss_dssp HHHHHHHHH-----CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCCEEECC
T ss_pred HHHHHHHhC-----CCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccc-----hhhc-CcCEEEEc
Confidence 999999752 377999999999999999999999999999999999999997654322 1112 36999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccC---CcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANAT---AATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~---~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
+||++++|.|+|+++++++ .+...... ..+++.. ..+++..
T Consensus 203 ~~K~~~~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~ 246 (396)
T 2ch1_A 203 AQKVLGAPPGITPISISPK-ALDVIRNRRTKSKVFYWD-----------------------------------LLLLGNY 246 (396)
T ss_dssp CC-CCCCCSSCEEEEECHH-HHHHHHTCSSCCSCGGGC-----------------------------------HHHHHHH
T ss_pred CCccccCCCCeEEEEECHH-HHHhhhhccCcccceEec-----------------------------------hHHHHHh
Confidence 9999999999999888663 33332111 0111110 0011110
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
. .. .........+.+...+.++..+++....+++++
T Consensus 247 ~-------------------------------------------~~-~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~ 282 (396)
T 2ch1_A 247 W-------------------------------------------GC-YDEPKRYHHTVASNLIFALREALAQIAEEGLEN 282 (396)
T ss_dssp T-------------------------------------------TC-SSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred h-------------------------------------------hh-hcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHH
Confidence 0 00 000000111223444555666777766678999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccCCc---e-eeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEE
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPEFQ---C-TNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMI 393 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~---~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~ 393 (448)
+.++..++++++.+.|+++ |++++ .+.. . .++.|.+ |.+.+ ..++.+.|.++ |+ .+
T Consensus 283 ~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~-~~~~~---------------~~~~~~~L~~~~gi-~v 343 (396)
T 2ch1_A 283 QIKRRIECAQILYEGLGKM-GLDIF-VKDPRHRLPTVTGIMI-PKGVD---------------WWKVSQYAMNNFSL-EV 343 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TCCBS-SCSGGGBCTTEEEEEC-CTTCC---------------HHHHHHHHHHHHCB-CC
T ss_pred HHHHHHHHHHHHHHHHHHC-CCeec-cCCccccCCceEEEEc-CCCCC---------------HHHHHHHHHHhCCE-EE
Confidence 9999999999999999998 88876 3322 1 2455543 22221 23688888875 84 34
Q ss_pred EeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 394 GYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 394 ~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
.++... ..++++|++++ ++.++++|+++++++|+++.+++.
T Consensus 344 ~~g~~~--~~~~~iRi~~~-~~~~~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 344 QGGLGP--TFGKAWRVGIM-GECSTVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp BCCCGG--GTTTEEEEECC-GGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred ecCccc--cCCCEEEEECC-CCcCCHHHHHHHHHHHHHHHHHhC
Confidence 332211 12379999994 245689999999999999987654
No 40
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.92 E-value=5.3e-24 Score=213.47 Aligned_cols=305 Identities=13% Similarity=0.074 Sum_probs=205.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecC--CCchHHHHHHHHhCCCCCcEEEEec-CCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSE--DSHYSMLKAAHWLGIGMDNVIRVKT-NERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~--~~H~s~~~~~~~~g~~~~~v~~v~~-~~~g~id~ 80 (448)
.+++|+|||+++..++.++.... .+++.|++.+ ..|.++...++..|. +++.++. ++++.+|+
T Consensus 61 ~v~~~~g~t~al~~~~~~~~~~~-----------~~gd~vlv~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~d~ 126 (385)
T 2bkw_A 61 PFVLAGSGTLGWDIFASNFILSK-----------APNKNVLVVSTGTFSDRFADCLRSYGA---QVDVVRPLKIGESVPL 126 (385)
T ss_dssp EEEEESCTTHHHHHHHHHHSCTT-----------CSCCEEEEECSSHHHHHHHHHHHHTTC---EEEEECCSSTTSCCCH
T ss_pred eEEEcCchHHHHHHHHHHHhccC-----------CCCCeEEEEcCCcchHHHHHHHHHcCC---ceEEEecCCCCCCCCH
Confidence 57899999999999887764210 1445555543 344555577777888 7899998 88889999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc--CCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY--DLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~--g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
++|++++++ .++++|++++++|++|.+.|+++|.++|++| |+++|+|++|+.+..+.+ +... .+|++
T Consensus 127 ~~l~~~l~~-----~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~ 195 (385)
T 2bkw_A 127 ELITEKLSQ-----NSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFE-----FDEW-GVDFA 195 (385)
T ss_dssp HHHHHHHHH-----SCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCC-----TTTT-TCSEE
T ss_pred HHHHHHHhc-----CCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccc-----cccc-CceEE
Confidence 999999975 2478999999999999999999999999999 999999999987765332 1122 37999
Q ss_pred EECCccccCCCCceEEEEEeccchhh-hhcc----CCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChH
Q psy14299 159 SWNPHKMLGAPLQCSILLIKEKGLLH-QANA----TAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 233 (448)
Q Consensus 159 ~~s~hK~l~~P~g~G~l~vr~~~~~~-~~~~----~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 233 (448)
++++||++++|.|+|+++++++ .+. .... ....|... . .
T Consensus 196 ~~s~~K~~~~~~G~G~~~~~~~-~~~~~l~~~~~~~~~~~~~~-------------~----------------------~ 239 (385)
T 2bkw_A 196 LTASQKAIGAPAGLSISLCSSR-FMDYALNDSKNGHVHGYFSS-------------L----------------------R 239 (385)
T ss_dssp EEESSSTTCCCSCEEEEEECHH-HHHHHTCHHHHCCCSCSTTC-------------H----------------------H
T ss_pred EecCccccccCCcceEEEEcHH-HHHHHHhhccCCCCCceeec-------------H----------------------H
Confidence 9999999999999999988664 333 2110 00111100 0 0
Q ss_pred HHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcC
Q psy14299 234 GFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 313 (448)
Q Consensus 234 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (448)
.+...... ... .........+...+.++..+++....
T Consensus 240 ~~~~~~~~-~~~------------------------------------------~~~~~~~~~~~~~~~a~~~al~~~~~ 276 (385)
T 2bkw_A 240 RWTPIMEN-YEA------------------------------------------GKGAYFATPPVQLINSLDVALKEILE 276 (385)
T ss_dssp HHHHHHHH-HHT------------------------------------------TCCCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHh-hhc------------------------------------------cCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 00000000 000 00000011223445566677777777
Q ss_pred ccHHHHHHHHHHHHHHHHHHh-hcCCCeEEeccCC-----ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHh
Q psy14299 314 LGFRHFVDNAVDCSRYFLSQI-SQRPGFRLVIPEF-----QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVL 387 (448)
Q Consensus 314 ~G~~~~~~~~~~l~~~~~~~L-~~~pg~~l~~~~~-----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~ 387 (448)
.|++++.++..++++++.+.| +++ |++++ .+. ..+++.|.+. + ..++.+.|.+
T Consensus 277 ~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~-~~~~~~~~~~~~~~~~~~--~-----------------~~~~~~~l~~ 335 (385)
T 2bkw_A 277 EGLHKRWDLHREMSDWFKDSLVNGL-QLTSV-SRYPSNMSAHGLTAVYVA--D-----------------PPDVIAFLKS 335 (385)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHTTT-CCEES-SCSSSTTBCSSCEEEECS--C-----------------HHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhc-Cceec-ccCcccccCCceEEEecC--C-----------------HHHHHHHHHH
Confidence 789999999999999999999 988 89886 321 3455555431 0 1368888888
Q ss_pred CCcEEEEeeecCCcccccEEEEE-ecCCC-CCCHHHHHHHHHHHHHHHHH
Q psy14299 388 GGTLMIGYQPLQHRNLHNFFRLV-TTCHP-ASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 388 ~g~~~~~~~~~~g~~~~~~lRis-~~~~~-~~t~edid~l~~al~~~~~~ 435 (448)
+| +.+.++.... ..++++|++ +..|. .+|++|+++++++|+++.++
T Consensus 336 ~g-i~v~~g~~~~-~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 336 HG-VVIAGGIHKD-IGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp TT-EECBCCCCTT-TGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred CC-eEEeCCCCcc-cCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 88 5554432211 123799999 42133 47999999999999987654
No 41
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=1.6e-23 Score=212.12 Aligned_cols=289 Identities=12% Similarity=0.078 Sum_probs=196.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHH----hCCCCCcEEEEecC-CCCCc
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHW----LGIGMDNVIRVKTN-ERGQM 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~----~g~~~~~v~~v~~~-~~g~i 78 (448)
.++||+|||+++..++.+..... .+++.|+++..+|.++...+.. .|. +++.++.+ +++.+
T Consensus 88 ~v~~~~g~t~al~~~~~~l~~~~-----------~~gd~vi~~~~~~~~~~~~~~~~~~~~g~---~v~~v~~~~~~~~~ 153 (406)
T 3cai_A 88 GVVLGADRAVLLSLLAEASSSRA-----------GLGYEVIVSRLDDEANIAPWLRAAHRYGA---KVKWAEVDIETGEL 153 (406)
T ss_dssp GEEEESCHHHHHHHHHHHTGGGG-----------BTTCEEEEETTSCGGGTHHHHHHHHHHBC---EEEEECCCTTTCCC
T ss_pred eEEEeCChHHHHHHHHHHHhhcc-----------CCCCEEEEcCCccHHHHHHHHHHHHhcCC---eEEEEecCcccCCc
Confidence 58999999999877765542111 1567789999999987666554 577 78899988 68899
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
|+++|++++++ ++++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+..+.+... . .+|++
T Consensus 154 d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~-----~-~~d~~ 221 (406)
T 3cai_A 154 PTWQWESLISK------STRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRE-----T-DADVV 221 (406)
T ss_dssp CGGGHHHHCCT------TEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHH-----H-CCSEE
T ss_pred CHHHHHHHhCC------CceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchh-----c-CCCEE
Confidence 99999999854 588999999999999999999999999999999999999997765433111 1 36999
Q ss_pred EECCccccCCCCceE-EEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 159 SWNPHKMLGAPLQCS-ILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 159 ~~s~hK~l~~P~g~G-~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
+.|+||+++ |. +| ++++++ .+........ .+... . . ...+..+.
T Consensus 222 ~~s~~K~~g-~~-~G~~~~~~~-~~~~~l~~~~-~~~~~-~-----~----~~~~~~~t--------------------- 266 (406)
T 3cai_A 222 TVNAHAWGG-PP-IGAMVFRDP-SVMNSFGSVS-TNPYA-T-----G----PARLEIGV--------------------- 266 (406)
T ss_dssp EEEGGGGTS-CS-CEEEEESCH-HHHHTSCCCC-SCTTC-C-----G----GGGGCCSC---------------------
T ss_pred EeehhhhcC-CC-cCeEEEEeh-HHHhhcCCcc-cCCCC-C-----c----cccccCCC---------------------
Confidence 999999875 65 88 777755 3333221110 00000 0 0 00000000
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc---
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL--- 314 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 314 (448)
.+.....++..++++....
T Consensus 267 ----------------------------------------------------------~~~~~~~a~~~al~~~~~~g~~ 288 (406)
T 3cai_A 267 ----------------------------------------------------------HQFGLLAGVVASIEYLAALDES 288 (406)
T ss_dssp ----------------------------------------------------------CCHHHHHHHHHHHHHHHTSSTT
T ss_pred ----------------------------------------------------------ccHHHHHHHHHHHHHHHHhccc
Confidence 0011122223344444443
Q ss_pred -----------cHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCC--ceeeEEEEeeccCCCccccchhhhhhhhhhhHHH
Q psy14299 315 -----------GFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEF--QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRI 381 (448)
Q Consensus 315 -----------G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i 381 (448)
+++++.++..++++++.+.|+++|+++++ .+. ..+++.|.+. +.+ ..++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~--~~~---------------~~~~ 350 (406)
T 3cai_A 289 ARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLI-GRPEAQIPVVSFAVH--KVP---------------ADRV 350 (406)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEC-CCCSSBCSEEEEEET--TBC---------------HHHH
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEc-CCccccCCEEEEEEC--CcC---------------HHHH
Confidence 37889999999999999999999999986 432 3555666542 111 2368
Q ss_pred HHHHHhCCcEEEEeee------cCCc-ccccEEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy14299 382 KEKLVLGGTLMIGYQP------LQHR-NLHNFFRLVTTCHPASSRQDMDYAIDQIELR 432 (448)
Q Consensus 382 ~~~L~~~g~~~~~~~~------~~g~-~~~~~lRis~~~~~~~t~edid~l~~al~~~ 432 (448)
.+.|.++| +.+.++. ..|. ...+++|+++ +.+++++|+++++++|+++
T Consensus 351 ~~~L~~~g-i~v~~g~~~~~~~~~g~~~~~~~iRis~--~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 351 VQRLADNG-ILAIANTGSRVLDVLGVNDVGGAVTVGL--AHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp HHHHHHTT-EECEECCSCHHHHHHTTTTTTCCEEEEC--CTTCCHHHHHHHHHHHHTC
T ss_pred HHHHHHCC-cEEecCChHHHHHHcCCCCCCCeEEEEe--ecCCCHHHHHHHHHHHHHh
Confidence 88888888 4444432 0111 0126899999 6789999999999999753
No 42
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.92 E-value=7.6e-24 Score=214.24 Aligned_cols=204 Identities=12% Similarity=0.144 Sum_probs=144.5
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec---CCCCCcC
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT---NERGQMI 79 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~---~~~g~id 79 (448)
.+.++++|+|-+++..+++++++..+ ..+.|++++.+|.|+.+++.++|+ ..+.+++ ++...+|
T Consensus 135 ~~~flVnGsTgg~lamilaa~r~~rp----------g~d~VIvpRn~HKSv~kAliL~Gl---~Pv~V~p~~d~~~~~id 201 (501)
T 3hl2_A 135 ANCFVVPMATGMSLTLCFLTLRHKRP----------KAKYIIWPRIDQKSCFKSMITAGF---EPVVIENVLEGDELRTD 201 (501)
T ss_dssp CEEEEESSCHHHHHHHHHHHHHHHCT----------TCCEEEEECCCCHHHHHHHHHTTC---EEEEECEEEETTEEEEC
T ss_pred CcEEEECcHHHHHHHHHHHHcCcccC----------CCCEEEEecchHHHHHHHHHHcCC---eEEEEeeeecccccCCC
Confidence 35788999996655555544443110 225688899999999999999999 5556655 3457899
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCc-cccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTV-LGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~-tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
+++|+++|++. +....+++++.+++. .+..+||++|+++||+||+++|||.|||+...+..........++.+|++
T Consensus 202 ~e~le~aI~e~---ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~v 278 (501)
T 3hl2_A 202 LKAVEAKVQEL---GPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAF 278 (501)
T ss_dssp HHHHHHHHHHH---CGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEE
T ss_pred HHHHHHHHHhc---CCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEE
Confidence 99999999874 223445555555444 45779999999999999999999999999886554332221122248999
Q ss_pred EECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 159 SWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 159 ~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
+.|+||++..|.|.++++.++++++..... .|... ...++++.+|+++..+|++||++.
T Consensus 279 VqS~HK~llvpIGG~ii~~~d~e~l~~~~~---~yPGr------------------~S~Spsldl~~tLL~lGr~Gy~~l 337 (501)
T 3hl2_A 279 VQSLDKNFMVPVGGAIIAGFNDSFIQEISK---MYPGR------------------ASASPSLDVLITLLSLGSNGYKKL 337 (501)
T ss_dssp EEEHHHHHCCCSSCEEEEESCHHHHHHHHH---TSCSC------------------BCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecccccceeecCceEEEeCCHHHHHHHHH---hCCCC------------------CCCcHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988888766655321 12110 013456678888888888888775
Q ss_pred HHHhh
Q psy14299 239 VDNAV 243 (448)
Q Consensus 239 i~~~~ 243 (448)
+++..
T Consensus 338 l~e~~ 342 (501)
T 3hl2_A 338 LKERK 342 (501)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55433
No 43
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.92 E-value=4e-24 Score=213.52 Aligned_cols=153 Identities=19% Similarity=0.191 Sum_probs=130.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEe--cCCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVK--TNERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~--~~~~g~id~e 81 (448)
.+++|+|||+++..++.++.. +++.|+++..+|+++..+++..|. +++.++ .++++.+|++
T Consensus 71 ~v~~~~g~t~a~~~~~~~~~~--------------~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~ 133 (371)
T 2e7j_A 71 VARVTNGAREAKFAVMHSLAK--------------KDAWVVMDENCHYSSYVAAERAGL---NIALVPKTDYPDYAITPE 133 (371)
T ss_dssp EEEEESSHHHHHHHHHHHHCC--------------TTCEEEEETTCCHHHHHHHHHTTC---EEEEECCCCTTTCCCCHH
T ss_pred EEEEeCChHHHHHHHHHHHhC--------------CCCEEEEccCcchHHHHHHHHcCC---eEEEeecccCCCCCcCHH
Confidence 578999999999999887633 567899999999999999999998 789999 8888999999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+|++++++.... .++++|++++++|++|.+.|+++|.++|++||+++++|++|+.+..+.+... . .+|+++.|
T Consensus 134 ~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-----~-~~di~~~s 206 (371)
T 2e7j_A 134 NFAQTIEETKKR-GEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKE-----I-GADFIVGS 206 (371)
T ss_dssp HHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHH-----H-TCSEEEEE
T ss_pred HHHHHHHhhccc-CCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhh-----c-CCCEEEec
Confidence 999999753211 3688999999999999999999999999999999999999998765432111 1 36899999
Q ss_pred CccccCCCCceEEEEEecc
Q psy14299 162 PHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~ 180 (448)
+||++++|.++|+++++++
T Consensus 207 ~sK~~~~~~~~G~~~~~~~ 225 (371)
T 2e7j_A 207 GHKSMAASGPIGVMGMKEE 225 (371)
T ss_dssp HHHHSSCCSSCEEEEECTT
T ss_pred CCcCCCCCCCcEEEEEech
Confidence 9999999999999998765
No 44
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.92 E-value=3.6e-24 Score=214.97 Aligned_cols=280 Identities=14% Similarity=0.032 Sum_probs=194.6
Q ss_pred cEEE-eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCC--cCH
Q psy14299 4 KPFL-LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQ--MIC 80 (448)
Q Consensus 4 ~g~~-t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~--id~ 80 (448)
..+| |+|||+++.+++.... + | ....+|+.+..+|..+ +.++..|. ++..++.++++. +++
T Consensus 70 ~v~f~t~~~T~a~n~~~~~~~-~--------~---~~~~~i~~~~~~~~~~-~~a~~~G~---~v~~~~~~~~g~~~~~~ 133 (361)
T 3m5u_A 70 EVLFLQGGASLQFAMIPMNLA-L--------N---GVCEYANTGVWTKKAI-KEAQILGV---NVKTVASSEESNFDHIP 133 (361)
T ss_dssp EEEEESSHHHHHHHHHHHHHC-C--------S---SCEEEEECSHHHHHHH-HHHHHTTC---CEEEEEECTTTTSCSCC
T ss_pred eEEEEcCcHHHHHHHHHHhcC-C--------C---CeEEEEeCCHHHHHHH-HHHHHcCC---ceEEEecccCcCCCcCC
Confidence 5788 9999999888776543 2 1 1123566677777544 44455677 799999988875 567
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
+. + |++ ++++|.+++.+|.+|.+.|. +++ +|+++|||++++++..+++.. ..|++++
T Consensus 134 ~~-~--l~~------~t~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~~--------~~d~~~~ 190 (361)
T 3m5u_A 134 RV-E--FSD------NADYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDFS--------NIALFYG 190 (361)
T ss_dssp CC-C--CCT------TSSEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCCT--------TEEEEEE
T ss_pred hh-h--cCC------CCCEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCcc--------cCCEEEE
Confidence 66 3 543 57899999999999998662 344 499999999999999877642 3689999
Q ss_pred CCccccCCCCceEEEEEeccchhhhhcc-CCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQANA-TAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
++|||++ |.|+|+++++++. +....+ ..+.|+... ...
T Consensus 191 s~~K~~g-p~G~g~l~~~~~~-~~~~~~~~~p~~~~~~---------------------------------------~~~ 229 (361)
T 3m5u_A 191 GVQKNAG-ISGLSCIFIRKDM-LERSKNKQIPSMLNYL---------------------------------------THA 229 (361)
T ss_dssp ETTTTSS-CTTCEEEEEEHHH-HHHHHTCCCCGGGCHH---------------------------------------HHH
T ss_pred echhccC-CCccEEEEEcHHH-HhhhcCCCCCceeehH---------------------------------------HHh
Confidence 9999995 9999999998764 333222 112221100 000
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc-cHHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL-GFRH 318 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~ 318 (448)
+. +....-++...++++..+++++.++ |+++
T Consensus 230 ~~------------------------------------------------~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~ 261 (361)
T 3m5u_A 230 EN------------------------------------------------QSLFNTPPTFAIYMFNLEMDWLLNQGGLDK 261 (361)
T ss_dssp HT------------------------------------------------TTCSSCCCHHHHHHHHHHHHHHHTTTCHHH
T ss_pred hc------------------------------------------------CCCCCCccHHHHHHHHHHHHHHHHccCHHH
Confidence 00 0000123356677888899999999 8999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCe-EEeccCC--ce-eeEEEEeec-cCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEE
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGF-RLVIPEF--QC-TNICFWFIP-VSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMI 393 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~-~l~~~~~--~~-~~v~f~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~ 393 (448)
+.++..++++++++.|++++|+ +++ .++ +. ++++|.+.. .++ ..++...|.++| +.+
T Consensus 262 i~~~~~~l~~~l~~~L~~~~g~~~~~-~~~~~rs~~ivsf~~~~~~~~----------------~~~~~~~L~~~g-I~~ 323 (361)
T 3m5u_A 262 VHEKNSQKATMLYECIDLSNGFYKGH-ADKKDRSLMNVSFNIAKNKDL----------------EPLFVKEAEEAG-MIG 323 (361)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTSEEES-SCGGGBCSSEEEEEESSCTTH----------------HHHHHHHHHHTT-EEC
T ss_pred HHHHHHHHHHHHHHHHHHCCCeeecc-CCHHHcCCeEEEEECCCchhh----------------hHHHHHHHHHCC-CEE
Confidence 9999999999999999999776 664 322 23 467776531 111 125777888888 443
Q ss_pred EeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 394 GYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 394 ~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
..+ .... +.+|+|+ +.++|++|||+|+++|+++.++
T Consensus 324 ~~g-~~~~---g~iRiS~--~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 324 LKG-HRIL---GGIRASI--YNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp CBC-CTTT---CSEEEEC--CTTSCHHHHHHHHHHHHHHHHH
T ss_pred ecC-CCcc---CeEEEEc--cCCCCHHHHHHHHHHHHHHHHh
Confidence 322 1122 5699999 5799999999999999998865
No 45
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.92 E-value=3e-24 Score=216.84 Aligned_cols=151 Identities=20% Similarity=0.234 Sum_probs=125.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCe-EEEecCCCchHHHHHHHHh---CCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPL-CMFTSEDSHYSMLKAAHWL---GIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~-~Vl~~~~~H~s~~~~~~~~---g~~~~~v~~v~~~~~g~id 79 (448)
.+++|+|||+++.+++.+++.... .+++ .|+++..+|+++...+..+ |. +++.+|.++++.+|
T Consensus 82 ~v~~~~g~t~al~~~~~~l~~~~~----------~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d 148 (400)
T 3vax_A 82 ELIFTSGATESNNIALLGLAPYGE----------RTGRRHIITSAIEHKAVLEPLEHLAGRGF---EVDFLTPGPSGRIS 148 (400)
T ss_dssp GEEEESCHHHHHHHHHHTTHHHHH----------HHTCCEEEEETTSCHHHHHHHHHHHTTTC---EEEEECCCTTCCCC
T ss_pred cEEEeCCHHHHHHHHHHHHHHhhc----------cCCCCEEEECccccHhHHHHHHHHHhcCC---eEEEEccCCCCCcC
Confidence 589999999999998887651100 0456 7899999999998887765 55 79999999899999
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+++|++++++ ++++|++++++|++|.+.|+++|.++|++||+++++|++|+.+....+ +... +|+++
T Consensus 149 ~~~l~~~i~~------~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~-----~~~~--~d~~~ 215 (400)
T 3vax_A 149 VEGVMERLRP------DTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGD-----LTTP--IDMIS 215 (400)
T ss_dssp HHHHHTTCCT------TEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGG-----GGSC--CSEEE
T ss_pred HHHHHHhcCC------CceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcC-----hhhc--CcEEE
Confidence 9999999864 588999999999999999999999999999999999999997765432 2222 69999
Q ss_pred ECCccccCCCCceEEEE-Eeccc
Q psy14299 160 WNPHKMLGAPLQCSILL-IKEKG 181 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~-vr~~~ 181 (448)
.++|| +++|.|+|+++ ++++.
T Consensus 216 ~s~~K-~~g~~g~g~~~~~~~~~ 237 (400)
T 3vax_A 216 ISGHK-IGAPKGVGALVTRRREE 237 (400)
T ss_dssp EETGG-GTSCSSCEEEEECBCSS
T ss_pred EeHHH-hCCCCceEEEEEecchh
Confidence 99999 55688999999 87744
No 46
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.92 E-value=2.4e-24 Score=218.07 Aligned_cols=283 Identities=12% Similarity=0.015 Sum_probs=191.4
Q ss_pred cEEE-eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC--CCCC-cC
Q psy14299 4 KPFL-LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN--ERGQ-MI 79 (448)
Q Consensus 4 ~g~~-t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~--~~g~-id 79 (448)
..+| |+|||+++.+++..... +++.+++....|++. .+........ .+..++.+ ++|. ++
T Consensus 92 evif~t~~~T~a~n~ai~~l~~--------------~gd~v~~~~~~~~~~-~~~~~a~~~G-~v~~v~~~~~~~G~~~~ 155 (386)
T 3qm2_A 92 KVLFCHGGGRGQFAGVPLNLLG--------------DKTTADYVDAGYWAA-SAIKEAKKYC-APQIIDAKITVDGKRAV 155 (386)
T ss_dssp EEEEEESCTTHHHHHHHHHHCT--------------TCCEEEEEESSHHHH-HHHHHHTTTS-EEEEEECEEEETTEEEE
T ss_pred eEEEEcCCchHHHHHHHHhccC--------------CCCeEEEEeCCHHHH-HHHHHHHHhC-CeEEEecCcccCCCCCC
Confidence 4788 69999998888765432 334443333445543 2222222222 48888887 5664 88
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccc-cCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF-DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~-~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
++++++++++ ++++|++++.+|.+|.+ +|+++|+ +|+++|||++|+++..+++... .|++
T Consensus 156 ~~~~~~~l~~------~t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~--------~~~~ 216 (386)
T 3qm2_A 156 KPMREWQLSD------NAAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSR--------YGVI 216 (386)
T ss_dssp CCGGGCCCCT------TCSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGG--------CSEE
T ss_pred chHHHhhcCC------CCcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCccc--------cCEE
Confidence 8888777643 57899999999999995 9999996 8999999999999999777432 2577
Q ss_pred EECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 159 SWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 159 ~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
++++|||++ |.|+|+++++++. +....+..+.++. + . +..+
T Consensus 217 ~~s~hK~lG-P~G~g~l~v~~~~-~~~~~~~~p~~~~--------------~--------------~--------~~~~- 257 (386)
T 3qm2_A 217 YAGAQKNIG-PAGLTLVIVREDL-LGKAHESCPSILD--------------Y--------------T--------VLND- 257 (386)
T ss_dssp EEETTTTTC-CTTEEEEEEEGGG-CSCCCTTSCGGGC--------------H--------------H--------HHHH-
T ss_pred EEecccccC-CCccEEEEECHHH-HhhhcccCCcHHH--------------H--------------H--------HHhh-
Confidence 899999995 9999999998864 3322111111110 0 0 0000
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc-cHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL-GFR 317 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~ 317 (448)
. +....-++.+.++++..+++++.++ |++
T Consensus 258 --~------------------------------------------------~~~~gTp~v~~i~~l~~Al~~~~~~gG~~ 287 (386)
T 3qm2_A 258 --N------------------------------------------------DSMFNTPPTFAWYLSGLVFKWLKAQGGVA 287 (386)
T ss_dssp --C-------------------------------------------------------CCSHHHHHHHHHHHHHHHTHHH
T ss_pred --c------------------------------------------------CCCCCCCcHHHHHHHHHHHHHHHHhcCHH
Confidence 0 0001123356678888899998888 899
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCe-EEeccCC--ce-eeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEE
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGF-RLVIPEF--QC-TNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMI 393 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~-~l~~~~~--~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~ 393 (448)
++.++..++++++++.|+++ ++ ... .++ +. ++++|.+...++ ...+.+.|.++| +.+
T Consensus 288 ~i~~~~~~l~~~l~~~l~~~-~~~~~~-~~~~~rs~~iv~f~~~~~~~----------------~~~~~~~L~~~g-I~~ 348 (386)
T 3qm2_A 288 AMHKINQQKAELLYGVIDNS-DFYRND-VAQANRSRMNVPFQLADNTL----------------DKVFLEESFAAG-LHA 348 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTC-SSEECC-BCGGGBCSSEEEEEESSGGG----------------HHHHHHHHHHTT-EEC
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCcccC-CCHHHcCceEEEEECCCccc----------------cHHHHHHHHHCC-CEE
Confidence 99999999999999999998 65 332 222 33 577887632111 136677788888 433
Q ss_pred EeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 394 GYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 394 ~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
..+ .... +.+|+|+ +.+||++|||+|+++|+++.++
T Consensus 349 ~~g-~~~~---~~iRiS~--~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 349 LKG-HRVV---GGMRASI--YNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp CBC-CTTT---CSEEEEC--CTTSCHHHHHHHHHHHHHHHHH
T ss_pred eCC-CCCc---CeEEEEc--CCCCCHHHHHHHHHHHHHHHHh
Confidence 221 1111 4599999 6899999999999999999875
No 47
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.91 E-value=1.1e-23 Score=208.89 Aligned_cols=282 Identities=17% Similarity=0.200 Sum_probs=189.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH--HHHh--CCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA--AHWL--GIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~--~~~~--g~~~~~v~~v~~~~~g~id 79 (448)
.+++|+|||+++..++.+++. +++.|+++...|++.... +... |. +++.+|.+ ++.+|
T Consensus 61 ~v~~~~~gt~a~~~al~~~~~--------------~gd~vi~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~-~~~~d 122 (356)
T 1v72_A 61 EVFLVPTGTAANALCLSAMTP--------------PWGNIYCHPASHINNDECGAPEFFSNGA---KLMTVDGP-AAKLD 122 (356)
T ss_dssp EEEEESCHHHHHHHHHHTSCC--------------TTEEEEECTTSHHHHSSTTHHHHHTTSC---EEEECCCG-GGCCC
T ss_pred cEEEeCCccHHHHHHHHHhcC--------------CCCEEEEcCccchhhhhchHHHHHhCCc---EEEEecCC-CCeEc
Confidence 379999999999988876533 577899999999998876 7777 87 78888875 57899
Q ss_pred HHHHHH-HHHHhh-hcCCCcEEEEEeccCCcccc---ccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCC-C
Q psy14299 80 CSFLEQ-TIQTSL-AEKKIPLFVNATAGTTVLGA---FDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGI-N 153 (448)
Q Consensus 80 ~e~Le~-~l~~~~-~~~~~~~lVv~~~~~t~tG~---~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~-~ 153 (448)
+++|++ ++++.. ..+.++++|+++++++ +|. .+++++|.++|++||+++|+|++|+.+............++ .
T Consensus 123 ~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~ 201 (356)
T 1v72_A 123 IVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKA 201 (356)
T ss_dssp HHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGG
T ss_pred HHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhh
Confidence 999999 886411 1123578999998764 998 67799999999999999999999875432111101111111 1
Q ss_pred CccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChH
Q psy14299 154 RANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 233 (448)
Q Consensus 154 ~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 233 (448)
.+|++++++||+ ++|.|+|+++.+ +++...... +.... +. . ...
T Consensus 202 ~~d~~~~s~sK~-g~~~G~g~~~~~-~~~~~~~~~-----~~~~~---------~~--~--~~~---------------- 245 (356)
T 1v72_A 202 GVDALSFGATKN-GVLAAEAIVLFN-TSLATEMSY-----RRKRA---------GH--L--SSK---------------- 245 (356)
T ss_dssp TCCEEEECCGGG-TCSSCEEEEESS-GGGHHHHHH-----HHHHT---------TC--C--CSS----------------
T ss_pred cCCEEEEecccC-CCcCccEEEEEC-HHHHhhHHH-----Hhhcc---------Cc--h--hhh----------------
Confidence 478999999999 679888888774 343332210 00000 00 0 000
Q ss_pred HHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcC
Q psy14299 234 GFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 313 (448)
Q Consensus 234 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (448)
.......+++.+..
T Consensus 246 ------------------------------------------------------------------~~~~~~~~~~~l~~ 259 (356)
T 1v72_A 246 ------------------------------------------------------------------MRFLSAQIDAYLTD 259 (356)
T ss_dssp ------------------------------------------------------------------THHHHHHHHHHTST
T ss_pred ------------------------------------------------------------------HHHHHHHHHHHHHh
Confidence 00011112223333
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEE
Q psy14299 314 LGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMI 393 (448)
Q Consensus 314 ~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~ 393 (448)
..++++.++..++++++.+.|+++||+++. .++..+.+.+.+ + .++.+.|.++|+ .+
T Consensus 260 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~-~--------------------~~~~~~l~~~gi-~v 316 (356)
T 1v72_A 260 DLWLRNARKANAAAQRLAQGLEGLGGVEVL-GGTEANILFCRL-D--------------------SAMIDALLKAGF-GF 316 (356)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCTTEEEE-SCCCSSEEEEEE-C--------------------HHHHHHHHHTTC-BC
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCcEEc-cCCCccEEEEEc-C--------------------HHHHHHHHhcCe-EE
Confidence 345556777888999999999999999987 544445444432 1 167788888884 44
Q ss_pred EeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 394 GYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 394 ~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
.++.+ + ++++|+++ +..++++|+++++++|+++.++
T Consensus 317 ~~g~~-~---~~~iRi~~--~~~~~~~~i~~~~~~l~~~l~~ 352 (356)
T 1v72_A 317 YHDRW-G---PNVVRFVT--SFATTAEDVDHLLNQVRLAADR 352 (356)
T ss_dssp BCSSS-S---TTEEEEEC--CTTCCHHHHHHHHHHHHHTC--
T ss_pred ecccc-C---CCeEEEEe--cCCCCHHHHHHHHHHHHHHHHh
Confidence 43222 2 37999998 7899999999999999987654
No 48
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.91 E-value=6.8e-23 Score=206.58 Aligned_cols=289 Identities=16% Similarity=0.135 Sum_probs=200.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..+++++||+++..++.+... +++.|+++...|.++..+++..|. +++.+|. +|+++|
T Consensus 105 ~~i~~~sGt~a~~~~l~~~~~--------------~gd~v~~~~~~~~~~~~~~~~~g~---~~~~~~~-----~d~~~l 162 (399)
T 3tqx_A 105 DTILYSSCFDANGGLFETLLG--------------PEDAIISDELNHASIIDGIRLCKA---QRYRYKN-----NAMGDL 162 (399)
T ss_dssp EEEEESCHHHHHHTTHHHHCC--------------TTCEEEEETTCCHHHHHHHHSCCS---EEEEECT-----TCTTHH
T ss_pred cEEEECchHHHHHHHHHHhcC--------------CCCEEEECCcccHHHHHHHHHcCC---ceeEeCC-----CCHHHH
Confidence 357778889998887765432 667899999999999999998888 7888876 488999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccc-hhhhhcCC-CCccEEEEC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEK-YSFVLKGI-NRANSVSWN 161 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~-~~~~~~~~-~~aD~~~~s 161 (448)
++.+++....+.++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+....+. ......++ ...|+++.+
T Consensus 163 ~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s 242 (399)
T 3tqx_A 163 EAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGT 242 (399)
T ss_dssp HHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEE
T ss_pred HHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEec
Confidence 9999875444447899999999999999999999999999999999999999765532211 01111121 346999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+||++++|.| |+++.++ +...........|..... ...
T Consensus 243 ~sK~~~g~~g-G~~~~~~-~~~~~~~~~~~~~~~~~~-------------------~~~--------------------- 280 (399)
T 3tqx_A 243 LGKALGGASG-GYTSGHK-EIIEWLRNRSRPYLFSNT-------------------VAP--------------------- 280 (399)
T ss_dssp SSSSSCSSCC-EEEEECH-HHHHHHHHHCHHHHSSCC-------------------CCH---------------------
T ss_pred chHhcccCce-EEEEcCH-HHHHHHHHhCcceeccCC-------------------CcH---------------------
Confidence 9999997766 7776644 343333221112211000 000
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
..+..+..+++... ++++++.+
T Consensus 281 ---------------------------------------------------------~~~~~~~~~l~~~~-~~~~~~~~ 302 (399)
T 3tqx_A 281 ---------------------------------------------------------VIVATSLKVLELLK-TEGPQLRK 302 (399)
T ss_dssp ---------------------------------------------------------HHHHHHHHHHHHHH-HTHHHHHH
T ss_pred ---------------------------------------------------------HHHHHHHHHHHHHh-hccHHHHH
Confidence 00111222333332 45677888
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCC-
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQH- 400 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g- 400 (448)
+..++++++.+.|+++ |++++ ++..+.+.+.+.. .. ...++.+.|.++| +.+.+....+
T Consensus 303 ~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~-~~---------------~~~~~~~~l~~~g-i~v~~~~~~~~ 362 (399)
T 3tqx_A 303 QLQENSRYFRAGMEKL-GFQLV--PGNHPIIPVMLGD-AQ---------------LATNMADHLLQEG-IYVVGFSYPVV 362 (399)
T ss_dssp HHHHHHHHHHHHHHHH-TCCBC--CCSSSEEEEEEEC-HH---------------HHHHHHHHHHHTT-EECCEECTTTS
T ss_pred HHHHHHHHHHHHHHHc-CCCcC--CCCCCEEEEEeCC-HH---------------HHHHHHHHHHHCC-CEEeeeCCCCC
Confidence 9999999999999998 88774 4555666554421 10 1247889999998 4454443221
Q ss_pred cccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 401 RNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 401 ~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
....+++|+++ +..++++|+++++++|+++.+++
T Consensus 363 ~~~~~~iRi~~--~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 363 PMGKARIRVQM--SAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp CTTCEEEEEEC--CTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCceEEEEe--ecCCCHHHHHHHHHHHHHHHHHh
Confidence 11237999999 67899999999999999998765
No 49
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.91 E-value=4.9e-22 Score=201.77 Aligned_cols=295 Identities=12% Similarity=0.057 Sum_probs=199.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCC-eEEEecCCCchHHHHHHH----Hh--CCCCCcEEEEecCCCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPP-LCMFTSEDSHYSMLKAAH----WL--GIGMDNVIRVKTNERG 76 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~-~~Vl~~~~~H~s~~~~~~----~~--g~~~~~v~~v~~~~~g 76 (448)
.++||+|||+++..++.+++.... .+ .++ .+|+++..+|.++..++. .. |. +++.++.
T Consensus 90 ~v~~~~g~t~al~~al~~~~~~~~-----~~---~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~---- 154 (416)
T 1qz9_A 90 EVVVTDTTSINLFKVLSAALRVQA-----TR---SPERRVIVTETSNFPTDLYIAEGLADMLQQGY---TLRLVDS---- 154 (416)
T ss_dssp SEEECSCHHHHHHHHHHHHHHHHH-----HH---STTCCEEEEETTSCHHHHHHHHHHHHHHCSSC---EEEEESS----
T ss_pred cEEEeCChhHHHHHHHHhhccccc-----cc---CCCCcEEEEcCCCCCchHHHHHHHHHHhcCCc---eEEEeCc----
Confidence 578999999998777776652100 00 033 357788889998766543 23 66 6777775
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCcc
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRAN 156 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD 156 (448)
+++|++++++ ++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+....+. . .. .+|
T Consensus 155 ---~~~l~~~i~~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~-~----~~-~~d 219 (416)
T 1qz9_A 155 ---PEELPQAIDQ------DTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDL-H----QA-GAD 219 (416)
T ss_dssp ---GGGHHHHCST------TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCH-H----HH-TCS
T ss_pred ---HHHHHHHhCC------CceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCCh-h----hc-CCC
Confidence 7888888753 5889999999999999999999999999999999999999977654331 1 11 369
Q ss_pred EEEECCccccCCCCce-EEEEEeccchhhhhccCCcccccccCcccccccCCC-CCcccCCCCchhHHHHHHHHHhChHH
Q psy14299 157 SVSWNPHKMLGAPLQC-SILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTG-DKSVQCGRKVDAFKLWLMWKARGNLG 234 (448)
Q Consensus 157 ~~~~s~hK~l~~P~g~-G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~g 234 (448)
++++++||+++++.++ |+++++++ +.........+|..... .++.. .+..
T Consensus 220 ~~~~s~~K~l~~g~~~~g~l~~~~~-~~~~l~~~~~g~~g~~~-----~~~~~~~~~~---------------------- 271 (416)
T 1qz9_A 220 YAIGCTYKYLNGGPGSQAFVWVSPQ-LCDLVPQPLSGWFGHSR-----QFAMEPRYEP---------------------- 271 (416)
T ss_dssp EEEECSSSTTCCCTTCCCEEEECTT-TTTTSCCSCCCGGGBCT-----TSCCCSSCCB----------------------
T ss_pred EEEecCcccCCCCCCCeEEEEECHH-HHhccCCCccccCcccc-----ccCCCCccCC----------------------
Confidence 9999999998777777 99988665 33222111111111100 00000 0000
Q ss_pred HHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcc--ccccchhhHHHHHHHHHhc
Q psy14299 235 FRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSV--QCGRKVDAFKLWLMWKARG 312 (448)
Q Consensus 235 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 312 (448)
....+.+ ...+...+.++..+++...
T Consensus 272 ----------------------------------------------------~~~~~~~~~~~~~~~~~~a~~~al~~~~ 299 (416)
T 1qz9_A 272 ----------------------------------------------------SNGIARYLCGTQPITSLAMVECGLDVFA 299 (416)
T ss_dssp ----------------------------------------------------CSSGGGGCCSCCCHHHHHHHHHHHHHHT
T ss_pred ----------------------------------------------------CcchHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 0000001 1122344556667788888
Q ss_pred CccHHHHHHHHHHHHHHHHHHhhcC-C--CeEEeccCC----ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHH
Q psy14299 313 NLGFRHFVDNAVDCSRYFLSQISQR-P--GFRLVIPEF----QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKL 385 (448)
Q Consensus 313 ~~G~~~~~~~~~~l~~~~~~~L~~~-p--g~~l~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L 385 (448)
.+|++++.++..++++++.+.|+++ | |++++ .+. ..+++.|.+. + ..++.+.|
T Consensus 300 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~--~-----------------~~~l~~~l 359 (416)
T 1qz9_A 300 QTDMASLRRKSLALTDLFIELVEQRCAAHELTLV-TPREHAKRGSHVSFEHP--E-----------------GYAVIQAL 359 (416)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEC-SCSSGGGBCSEEEEECT--T-----------------HHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEe-CCCCHHHcCCEEEEecC--C-----------------HHHHHHHH
Confidence 8899999999999999999999986 7 89987 432 2455555431 0 13688889
Q ss_pred HhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 386 VLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 386 ~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
.++| +.+.. .+. +++|+++. ++++|++|+++++++|+++.++.
T Consensus 360 ~~~g-i~~~~---~~~---~~lRis~~-~~~~t~~~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 360 IDRG-VIGDY---REP---RIMRFGFT-PLYTTFTEVWDAVQILGEILDRK 402 (416)
T ss_dssp HTTT-EECEE---ETT---TEEEEECC-TTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HhCC-cEecc---CCC---CeEEEeCc-ccCCCHHHHHHHHHHHHHHHhcc
Confidence 9998 44332 122 78999994 36899999999999999998764
No 50
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.91 E-value=3.5e-23 Score=226.21 Aligned_cols=302 Identities=13% Similarity=0.060 Sum_probs=203.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-----CCc
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-----GQM 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-----g~i 78 (448)
..++++|+|++|..++.+... +++.|++++.+|.|+..++...|. +++.++.+.+ +.+
T Consensus 223 ~i~~~~Gtt~a~~~~i~al~~--------------~GD~Vlv~~~~h~s~~~~~~~~G~---~~v~v~~~~~~~g~~g~i 285 (755)
T 2vyc_A 223 SWSVVVGTSGSNRTIMQACMT--------------DNDVVVVDRNCHKSIEQGLMLTGA---KPVYMVPSRNRYGIIGPI 285 (755)
T ss_dssp EEEESSHHHHHHHHHHHHHCC--------------TTCEEEEESSCCHHHHHHHHHHCC---EEEEECCCBCTTSCBCCC
T ss_pred eEEECCcHHHHHHHHHHHhcC--------------CCCEEEECCCchHHHHHHHHHcCC---EEEEEeCCCCcccccccc
Confidence 346677777888888877644 677899999999999999999998 7888887543 346
Q ss_pred -----CHHHHHHHHHHh----hhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhh
Q psy14299 79 -----ICSFLEQTIQTS----LAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVL 149 (448)
Q Consensus 79 -----d~e~Le~~l~~~----~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~ 149 (448)
|+++|+++|++. ...+.+|++++++++ |++|.+.|+++|+++|++||+++|||+||+.+..+.+..+. .
T Consensus 286 ~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~-~ 363 (755)
T 2vyc_A 286 YPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYAD-H 363 (755)
T ss_dssp CGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTT-S
T ss_pred CcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCcccCC-c
Confidence 999999999762 113445668888886 67999999999999999999999999999876443332211 0
Q ss_pred cCCCC--ccE------EEECCccccCCCCceEEEEEeccc-hhh-hhccCCcccccccCcccccccCCCCCcccCCCCch
Q psy14299 150 KGINR--ANS------VSWNPHKMLGAPLQCSILLIKEKG-LLH-QANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVD 219 (448)
Q Consensus 150 ~~~~~--aD~------~~~s~hK~l~~P~g~G~l~vr~~~-~~~-~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (448)
..+.. +|+ ++.|+||++++|.++|+++++++. .+. .........+ +.+
T Consensus 364 ~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~------------------~s~---- 421 (755)
T 2vyc_A 364 YAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMH------------------ATT---- 421 (755)
T ss_dssp SSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHHT------------------SCS----
T ss_pred chhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHHh------------------CCC----
Confidence 11122 566 999999999999999999997751 010 0000000000 000
Q ss_pred hHHHHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccch
Q psy14299 220 AFKLWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKV 299 (448)
Q Consensus 220 ~~~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (448)
.++..
T Consensus 422 ---------------------------------------------------------------------------sp~~~ 426 (755)
T 2vyc_A 422 ---------------------------------------------------------------------------SPLYA 426 (755)
T ss_dssp ---------------------------------------------------------------------------SCCHH
T ss_pred ---------------------------------------------------------------------------CHHHH
Confidence 01122
Q ss_pred hhHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCCC---------eEEeccCCce---------------------
Q psy14299 300 DAFKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRPG---------FRLVIPEFQC--------------------- 349 (448)
Q Consensus 300 ~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg---------~~l~~~~~~~--------------------- 349 (448)
.+.++..+++.+..+|.+++.++..++++++++.|++++| |+++ .+...
T Consensus 427 ~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (755)
T 2vyc_A 427 ICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPW-NKEVVTDPQTGKTYDFADAPTKLLTT 505 (755)
T ss_dssp HHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEES-SCSEEECTTTCCEEEGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeecc-Cchhccccccccccccccccchhccc
Confidence 3444556677777776678889999999999999999888 8877 33211
Q ss_pred ----------------------------eeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCc
Q psy14299 350 ----------------------------TNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHR 401 (448)
Q Consensus 350 ----------------------------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~ 401 (448)
..++|...+.+.++.. +..+--...+.+.|.+.| +.+... +
T Consensus 506 ~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~------~~~g~~~~~l~~~L~~~g-I~~e~~---~- 574 (755)
T 2vyc_A 506 VQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGEL------EETGVPAALVTAWLGRHG-IVPTRT---T- 574 (755)
T ss_dssp CGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSB------CSSCCCHHHHHHHHHTTT-CCCSEE---C-
T ss_pred hhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCc------cccCCcHHHHHHHHHHCC-CEEeec---C-
Confidence 1233332211221100 000111236777888877 433222 2
Q ss_pred ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 402 NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 402 ~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
.+.+|+++ |+.+|++|+++|+++|+++.+...
T Consensus 575 --~~~v~~~~--~~g~t~~~~~~l~~al~~~~~~~~ 606 (755)
T 2vyc_A 575 --DFQIMFLF--SMGVTRGKWGTLVNTLCSFKRHYD 606 (755)
T ss_dssp --SSEEEEEC--CTTCCTTTTHHHHHHHHHHHHHHH
T ss_pred --CCeEEEEE--CCCCCHHHHHHHHHHHHHHHHhhh
Confidence 26899999 899999999999999999987664
No 51
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.91 E-value=1.5e-22 Score=203.45 Aligned_cols=289 Identities=13% Similarity=0.088 Sum_probs=196.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-C--CCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-R--GQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~--g~id~ 80 (448)
..++|+|||+++..++.++.. +++.|+++..+|.++...++..|. +++.+|.++ + +.+|+
T Consensus 87 ~i~~~~g~~~a~~~~~~~l~~--------------~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~ 149 (391)
T 3dzz_A 87 WCVFASGVVPAISAMVRQFTS--------------PGDQILVQEPVYNMFYSVIEGNGR---RVISSDLIYENSKYSVNW 149 (391)
T ss_dssp GEEEESCHHHHHHHHHHHHSC--------------TTCEEEECSSCCHHHHHHHHHTTC---EEEECCCEEETTEEECCH
T ss_pred HEEECCCHHHHHHHHHHHhCC--------------CCCeEEECCCCcHHHHHHHHHcCC---EEEEeeeeecCCceeecH
Confidence 578999999999988877633 567899999999999999999998 788888752 2 35999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCC--Cc
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGIN--RA 155 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~--~a 155 (448)
++|++++++ .++++|++++++|++|.+ .++++|.++|++||+++|+|++|+.+......... +..+. ..
T Consensus 150 ~~l~~~l~~-----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~ 223 (391)
T 3dzz_A 150 ADLEEKLAT-----PSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITP-AFTVDWDAK 223 (391)
T ss_dssp HHHHHHHTS-----TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCC-GGGSCTTTG
T ss_pred HHHHHHHhc-----cCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCcee-hhhcCcccc
Confidence 999999963 258899999999999999 88999999999999999999999865542111111 11111 14
Q ss_pred c--EEEECCccccC-CCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhCh
Q psy14299 156 N--SVSWNPHKMLG-APLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 232 (448)
Q Consensus 156 D--~~~~s~hK~l~-~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 232 (448)
| +++.++||+++ ....+|+++++++++..........+.. +
T Consensus 224 d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~--------------~---------------------- 267 (391)
T 3dzz_A 224 NWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFFLAGI--------------G---------------------- 267 (391)
T ss_dssp GGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHHHHTC--------------S----------------------
T ss_pred CcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHHhhcc--------------C----------------------
Confidence 5 88999999986 3356788877645443332110000000 0
Q ss_pred HHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhc
Q psy14299 233 LGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARG 312 (448)
Q Consensus 233 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (448)
+.+.+.+.++..+++. .
T Consensus 268 --------------------------------------------------------------~~~~~~~~a~~~~l~~-~ 284 (391)
T 3dzz_A 268 --------------------------------------------------------------EPNLLAIPAAIAAYEE-G 284 (391)
T ss_dssp --------------------------------------------------------------SCCTTHHHHHHHHHHH-C
T ss_pred --------------------------------------------------------------CCCHHHHHHHHHHHhc-c
Confidence 0001111122222322 2
Q ss_pred CccHHHHHHHHHHHHHHHHHHhhc-CCCeEEeccCCceeeEE-EEeeccCCCccccchhhhhhhhhhhHHHHHHHH-hCC
Q psy14299 313 NLGFRHFVDNAVDCSRYFLSQISQ-RPGFRLVIPEFQCTNIC-FWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV-LGG 389 (448)
Q Consensus 313 ~~G~~~~~~~~~~l~~~~~~~L~~-~pg~~l~~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g 389 (448)
.+.++++.++..++++++.+.|++ +||++++ .+..+.+. +.+...+.+ ..++.+.|. ++|
T Consensus 285 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~~g 347 (391)
T 3dzz_A 285 HDWLRELKQVLRDNFAYAREFLAKEVPEVKVL--DSNASYLAWVDISALGMN---------------AEDFCKYLREKTG 347 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEC--CCCBSSEEEEECGGGCSC---------------HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEe--ccCceEEEEEehhhcCCC---------------HHHHHHHHHHhCC
Confidence 344677888889999999999999 8999986 34444444 332211121 237888886 778
Q ss_pred cEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 390 TLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 390 ~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
+.+.++...+...++++|+++ + ++++|++++++.|+++.+++
T Consensus 348 -i~v~~g~~~~~~~~~~iRis~--~--~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 348 -LIISAGNGYRGNGHEFVRINL--A--CPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp -EECEESGGGCTTGGGEEEEEC--C--SCHHHHHHHHHHHHHHHHTC
T ss_pred -EEEeCchhhCCCCCCEEEEEe--c--CCHHHHHHHHHHHHHHHHHh
Confidence 555554333322248999999 3 58999999999999988754
No 52
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.90 E-value=1.1e-21 Score=200.98 Aligned_cols=287 Identities=14% Similarity=0.146 Sum_probs=198.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..+++++||++|..++.++.. +++.|+++...|.++..+++..|. +++.++. +|+++|
T Consensus 126 ~~i~~~sGs~a~~~al~~l~~--------------~gd~vl~~~~~h~~~~~~~~~~g~---~~~~~~~-----~d~~~l 183 (427)
T 2w8t_A 126 GAIVFSTGYMANLGIISTLAG--------------KGEYVILDADSHASIYDGCQQGNA---EIVRFRH-----NSVEDL 183 (427)
T ss_dssp EEEEESCHHHHHHHHHHHHSC--------------TTCEEEEETTCCHHHHHHHHHSCS---EEEEECT-----TCHHHH
T ss_pred ceEEecCcHHHHHHHHHHhcC--------------CCCEEEECCcccHHHHHHHHHcCC---eeEEeCC-----CCHHHH
Confidence 468889999999888766432 567899999999999999999887 6777774 599999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchh-hhhcCC-CCccEEEEC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYS-FVLKGI-NRANSVSWN 161 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~-~~~~~~-~~aD~~~~s 161 (448)
++++++..+ .++++|+++++++++|.+.|+++|.++|++||+++++|++|+.+.+...... ....++ ..+|+++.+
T Consensus 184 e~~l~~~~~--~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s 261 (427)
T 2w8t_A 184 DKRLGRLPK--EPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGT 261 (427)
T ss_dssp HHHHHTSCS--SSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEE
T ss_pred HHHHHhccC--CCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEec
Confidence 999975211 2578999999999999999999999999999999999999998765311000 000121 247999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+||+++ +.| |+++.++ ++.........+|.+... ..
T Consensus 262 ~sK~~g-~~g-G~v~~~~-~l~~~l~~~~~~~~~~~~-----------------~~------------------------ 297 (427)
T 2w8t_A 262 FSKSVG-TVG-GFVVSNH-PKFEAVRLACRPYIFTAS-----------------LP------------------------ 297 (427)
T ss_dssp SSSTTC-SCC-EEEEECC-TTGGGGGGTCHHHHSSCC-----------------CC------------------------
T ss_pred chhhhc-cCC-CEEEeCH-HHHHHHHHhcccccccCC-----------------CC------------------------
Confidence 999998 445 7777754 444333221112211100 00
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
...+.++..+++.... ++++.+
T Consensus 298 --------------------------------------------------------~~~~aa~~~al~~~~~--~~~~~~ 319 (427)
T 2w8t_A 298 --------------------------------------------------------PSVVATATTSIRKLMT--AHEKRE 319 (427)
T ss_dssp --------------------------------------------------------HHHHHHHHHHHHHHTS--CHHHHH
T ss_pred --------------------------------------------------------HHHHHHHHHHHHHHhc--CHHHHH
Confidence 0111112233444322 567888
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCC-ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCC
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEF-QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQH 400 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g 400 (448)
+..++++++.+.|+++ |+++. .++ ..+++.+.+.. . ....++.+.|.++| +.+.+....+
T Consensus 320 ~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~-~---------------~~~~~l~~~L~~~G-i~v~~~~~~~ 380 (427)
T 2w8t_A 320 RLWSNARALHGGLKAM-GFRLG-TETCDSAIVAVMLED-Q---------------EQAAMMWQALLDGG-LYVNMARPPA 380 (427)
T ss_dssp HHHHHHHHHHHHHHHH-TCEES-CSSCCSSEEEEEESS-H---------------HHHHHHHHHHHHTT-EECEEECTTT
T ss_pred HHHHHHHHHHHHHHHc-CCccc-CCCCCCCEEEEEECC-H---------------HHHHHHHHHHHHCC-eEEeeeCCCC
Confidence 8999999999999998 88875 355 55666665421 0 01347889999998 5555443322
Q ss_pred c-ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 401 R-NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 401 ~-~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
. ...+++|+++ +.++|++|+++++++|+++.+++.
T Consensus 381 ~~~~~~~lRi~~--~~~~t~e~i~~~~~~l~~~l~~~~ 416 (427)
T 2w8t_A 381 TPAGTFLLRCSI--CAEHTPAQIQTVLGMFQAAGRAVG 416 (427)
T ss_dssp SCTTCEEEEEEC--CTTCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCeEEEEEe--CCCCCHHHHHHHHHHHHHHHHHhC
Confidence 1 1136999999 678999999999999999987654
No 53
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.90 E-value=1.6e-22 Score=200.49 Aligned_cols=280 Identities=14% Similarity=0.144 Sum_probs=188.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHH--HHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLK--AAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~--~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
.+++|+|||+++..++.+++. +++.|+++..+|+++.. .++..|. +++.+|.+ ++.+|++
T Consensus 68 ~v~~~~g~t~a~~~~~~~~~~--------------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~-~~~~d~~ 129 (359)
T 1svv_A 68 DVHFISGGTQTNLIACSLALR--------------PWEAVIATQLGHISTHETGAIEATGH---KVVTAPCP-DGKLRVA 129 (359)
T ss_dssp EEEEESCHHHHHHHHHHHHCC--------------TTEEEEEETTSHHHHSSTTHHHHTTC---CEEEECCT-TSCCCHH
T ss_pred cEEEeCCchHHHHHHHHHHhC--------------CCCEEEEcccchHHHHHHHHHhcCCC---eeEEEeCC-CCeecHH
Confidence 478999999999999887643 56789999999999988 4777788 78899986 7899999
Q ss_pred HHHHHHHHhh-hcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEeccccc---ccccccchhhhhcCCCC
Q psy14299 82 FLEQTIQTSL-AEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGG---SLIFSEKYSFVLKGINR 154 (448)
Q Consensus 82 ~Le~~l~~~~-~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~---~~~~~~~~~~~~~~~~~ 154 (448)
+|++.+++.. ..+.++++|+++++ |++|.+.| +++|.++|++||+++|+|++|.. +....+.....+. ..
T Consensus 130 ~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~ 206 (359)
T 1svv_A 130 DIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIA--RL 206 (359)
T ss_dssp HHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHH--HH
T ss_pred HHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhh--hc
Confidence 9999997631 12234789999988 68999988 99999999999999999999832 3222211110000 14
Q ss_pred ccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHH
Q psy14299 155 ANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 234 (448)
Q Consensus 155 aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g 234 (448)
+|++++++||+ ++|.|+|+++++++ +...... +..... ..... . .. .
T Consensus 207 ~d~~~~s~~K~-g~~~~~g~l~~~~~-~~~~~~~----~~~~~~-----------~~~~~--~---~~-----------~ 253 (359)
T 1svv_A 207 TDMFYIGATKA-GGMFGEALIILNDA-LKPNARH----LIKQRG-----------ALMAK--G---WL-----------L 253 (359)
T ss_dssp CSEEEEECTTT-TCSSCEEEEECSGG-GCTTHHH----HHHHTT-----------CCCTT--T---HH-----------H
T ss_pred CCEEEEecccC-CCCCceEEEEEccc-HHHHHHH----HHhcCC-----------ccccc--c---hh-----------h
Confidence 69999999998 56889999888543 3222211 000000 00000 0 00 0
Q ss_pred HHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc
Q psy14299 235 FRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 314 (448)
Q Consensus 235 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (448)
...+ ...+..+
T Consensus 254 ------------------------------------------------------------------~~~~---~~~l~~~ 264 (359)
T 1svv_A 254 ------------------------------------------------------------------GIQF---EVLMKDN 264 (359)
T ss_dssp ------------------------------------------------------------------HHHH---HHHTSTT
T ss_pred ------------------------------------------------------------------HHHH---HHHHhhh
Confidence 0000 0123335
Q ss_pred cHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEE
Q psy14299 315 GFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMI 393 (448)
Q Consensus 315 G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~ 393 (448)
+++++.++..++++++.+.| +.+|++++ .+.....+.+.+ + .++.+.|.++ |+.+
T Consensus 265 ~~~~~~~~~~~~~~~l~~~L-~~~~~~~~-~~~~~~~~~~~~-~--------------------~~~~~~l~~~~gi~v- 320 (359)
T 1svv_A 265 LFFELGAHSNKMAAILKAGL-EACGIRLA-WPSASNQLFPIL-E--------------------NTMIAELNNDFDMYT- 320 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHTTCCBS-SCCSSSEECBEE-E--------------------HHHHHHHTTTEECEE-
T ss_pred hHHHHHHHHHHHHHHHHHHh-ccCCeEEc-cCCccceEEEEc-C--------------------HHHHHHHHHhcCEEE-
Confidence 67778888999999999999 56798875 443333332221 1 2678889988 8554
Q ss_pred EeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 394 GYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 394 ~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
.+....+. +++|+++ +..++++|+++++++|+++.++
T Consensus 321 ~~~~~~~~---~~iRi~~--~~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 321 VEPLKDGT---CIMRLCT--SWATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp EEEETTTE---EEEEEEC--CTTCCHHHHHHHHHHHHHC---
T ss_pred EecccCCC---ceEEEEc--cCcCCHHHHHHHHHHHHHHHhc
Confidence 22222233 7999998 7889999999999999987654
No 54
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.90 E-value=1.4e-22 Score=202.49 Aligned_cols=300 Identities=10% Similarity=0.012 Sum_probs=194.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.+++|+|||+++..++.+++... .+++.|+++..+|+++..+++..|. +++.++.++++.+|+++|
T Consensus 49 ~v~~~~ggt~al~~~~~~~~~~~-----------~~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~d~~~l 114 (375)
T 2fnu_A 49 HALVFNSATSALLTLYRNFSEFS-----------ADRNEIITTPISFVATANMLLESGY---TPVFAGIKNDGNIDELAL 114 (375)
T ss_dssp EEEEESCHHHHHHHHHHHSSCCC-----------TTSCEEEECSSSCTHHHHHHHHTTC---EEEECCBCTTSSBCGGGS
T ss_pred eEEEeCCHHHHHHHHHHHhcccC-----------CCCCEEEECCCccHhHHHHHHHCCC---EEEEeccCCCCCCCHHHH
Confidence 57999999999998887763101 2567899999999999999999888 788999988889999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++++++ ++++|+++++ +|.+.|+++|.++|++||+++|+|++|+.+...... .+.....+++.++++|
T Consensus 115 ~~~i~~------~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~i~~~s~s~~ 182 (375)
T 2fnu_A 115 EKLINE------RTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNK---KVGGFALASVFSFHAI 182 (375)
T ss_dssp GGGCCT------TEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTT
T ss_pred HhhcCc------CceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeECCe---eccccCCeEEEeCCCC
Confidence 988854 4778777776 899999999999999999999999999987654221 1111223566677888
Q ss_pred cccCCCCceEEEEEec-cchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 164 KMLGAPLQCSILLIKE-KGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 164 K~l~~P~g~G~l~vr~-~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
|++ +| |.|++++++ +++......... .... .. ....+..... +..+.
T Consensus 183 K~~-~~-g~g~~~~~~~~~~~~~~~~~~~-~~~~-~~-~~~~~~~~~~----~~~~~----------------------- 230 (375)
T 2fnu_A 183 KPI-TT-AEGGAVVTNDSELHEKMKLFRS-HGML-KK-DFFEGEVKSI----GHNFR----------------------- 230 (375)
T ss_dssp SSS-CC-SSCEEEEESCHHHHHHHHHHTB-TTEE-ES-SSSCEEESSC----CCBCC-----------------------
T ss_pred CCc-cc-cCceEEEeCCHHHHHHHHHHHh-cCCc-cc-cccccccccc----cccCC-----------------------
Confidence 998 45 788888853 443332211000 0000 00 0000000000 00000
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 322 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 322 (448)
...+... +.....++++++.++
T Consensus 231 --------------------------------------------------------~~~~~~a--~~~~~~~~~~~~~~~ 252 (375)
T 2fnu_A 231 --------------------------------------------------------LNEIQSA--LGLSQLKKAPFLMQK 252 (375)
T ss_dssp --------------------------------------------------------CCHHHHH--HHHHHHTTHHHHHHH
T ss_pred --------------------------------------------------------CCHHHHH--HHHHHHHHHHHHHHH
Confidence 0001111 111123567778888
Q ss_pred HHHHHHHHHHHhhcCCCeEEeccCC---ce--eeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 323 AVDCSRYFLSQISQRPGFRLVIPEF---QC--TNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 323 ~~~l~~~~~~~L~~~pg~~l~~~~~---~~--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
..++++++.+.|+++||+++. .++ .. ..+.+.+.+.+.. ...++.+.|.++| +.+....
T Consensus 253 ~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~l~~~L~~~g-i~v~~~~ 316 (375)
T 2fnu_A 253 REEAALTYDRIFKDNPYFTPL-HPLLKDKSSNHLYPILMHQKFFT--------------CKKLILESLHKRG-ILAQVHY 316 (375)
T ss_dssp HHHHHHHHHHHHTTCSSEEES-GGGCSSCCCCSCEEEEECGGGGG--------------GHHHHHHHHHHTT-EECBCCC
T ss_pred HHHHHHHHHHHhhcCCCcccc-CCCCCCCcceEEEEEEeCccccc--------------hHHHHHHHHHHCC-CCccccc
Confidence 999999999999999999986 321 12 2233433211110 1237888898888 4444111
Q ss_pred cCCc-------------c------cccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 398 LQHR-------------N------LHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 398 ~~g~-------------~------~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
..+. . ..+++|+++ +.++|++|+++++++|+++.++++
T Consensus 317 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~--~~~~t~~~i~~~~~~l~~~~~~~~ 373 (375)
T 2fnu_A 317 KPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPC--HANLNLESVQNIAHSVLKTFESFK 373 (375)
T ss_dssp CCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECC--CTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred cccccchhhhcCCCccCChHHHHHHhCEEEecC--CCCCCHHHHHHHHHHHHHHHHHhc
Confidence 0000 0 126899999 789999999999999999887653
No 55
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.90 E-value=2.1e-22 Score=206.99 Aligned_cols=296 Identities=12% Similarity=0.092 Sum_probs=188.7
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH----HhCCCCCcEEEEecCCCCCcCH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH----WLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~----~~g~~~~~v~~v~~~~~g~id~ 80 (448)
+++|+|+|.++..++.+.+.. +++.|+++..+|+++...++ ..|+ +++.++. +++.+|+
T Consensus 128 i~~~~g~taa~ea~~~a~~~~-------------~gd~Viv~~~~h~s~~~~~~~~a~~~G~---~v~~v~~-~~~~~d~ 190 (438)
T 1wyu_A 128 ASMYDGATALAEGVLLALRET-------------GRMGVLVSQGVHPEYRAVLRAYLEAVGA---KLLTLPL-EGGRTPL 190 (438)
T ss_dssp SCBSSHHHHHHHHHHHHHHHH-------------TCCEEEEETTSCHHHHHHHHHHHHHTTC---EEEEECC-BTTBCCC
T ss_pred eEEeCcHHHHHHHHHHHHhcC-------------CCCEEEEcCccCHhHHHHHHHHHHHCCC---EEEEEcC-cCCccCH
Confidence 468999994432222222222 56679999999999886664 4677 7888887 5678887
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecc-cccccccccchhhhhcCCCCccEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDAC-WGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A-~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++ +. .++++|+++++ |++|.+.|+++|+++||+||+++|||.. ++.+.+..+. . .++|+++
T Consensus 191 ~~----i~------~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~~---~----~g~D~~~ 252 (438)
T 1wyu_A 191 PE----VG------EEVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPPG---A----YGADIAV 252 (438)
T ss_dssp CC----CC------TTEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCHH---H----HTCSEEE
T ss_pred HH----hC------CCeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCCc---c----CCCCEEE
Confidence 76 42 25889999998 9999999999999999999999997754 4444432221 0 1479999
Q ss_pred ECCcc-----ccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHH
Q psy14299 160 WNPHK-----MLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 234 (448)
Q Consensus 160 ~s~hK-----~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g 234 (448)
+|+|| |+++| ++|+++++++ +.... +.++.......... ..+.+....+
T Consensus 253 ~s~kk~~~~~~~~Gp-~~G~l~~~~~-~~~~l----~~~~~g~~~~~~~~---~~~~~~l~~~----------------- 306 (438)
T 1wyu_A 253 GDGQSLGLPMGFGGP-HFGFLATKKA-FVRQL----PGRLVSETVDVEGR---RGFILTLQAR----------------- 306 (438)
T ss_dssp EECTTTTCCCGGGCS-CCEEEEECGG-GGGGC----CSCCEEEEEBTTSC---EEEEECCGGG-----------------
T ss_pred ECCcccCCCccCCCC-CeeEEEEcHH-HHHhC----CCceeccccccCCC---cceeeecccc-----------------
Confidence 99888 78889 9999998764 33321 22221110000000 0000000000
Q ss_pred HHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcccccc-chhhHHHHHHHHHhcC
Q psy14299 235 FRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGR-KVDAFKLWLMWKARGN 313 (448)
Q Consensus 235 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 313 (448)
...+ +..+...++ |+. ....+..+..+...+.
T Consensus 307 -~~~~----r~~~~t~~~------------------------------------------~~~~~~~a~~aa~~l~~~~~ 339 (438)
T 1wyu_A 307 -EQYI----RRAKAKSNI------------------------------------------TTNAQLTALMGAMYLAALGP 339 (438)
T ss_dssp -SHHH----HGGGSSCCC------------------------------------------CSCCHHHHHHHHHHHHHHHH
T ss_pred -cccc----chhcccCCc------------------------------------------cchHHHHHHHHHHHHHHhCH
Confidence 0000 000011111 111 1112223344777788
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccC-CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEE
Q psy14299 314 LGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPE-FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLM 392 (448)
Q Consensus 314 ~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~ 392 (448)
+|++++.++..++++++.+.|+++||++++ .+ +....+.|.. + .. ..++.+.|.++|+.+
T Consensus 340 ~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~-~--~~---------------~~~~~~~L~~~gi~v 400 (438)
T 1wyu_A 340 EGLREVALKSVEMAHKLHALLLEVPGVRPF-TPKPFFNEFALAL-P--KD---------------PEAVRRALAERGFHG 400 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSTTCEEC-SCSSBCSEEEEEC-S--SC---------------HHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEEC-CCCCeEEEEEEeC-C--CC---------------HHHHHHHHHHCCcee
Confidence 899999999999999999999999999987 43 3344445532 1 11 237889999998443
Q ss_pred -EEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy14299 393 -IGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELR 432 (448)
Q Consensus 393 -~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~ 432 (448)
+.++...+ ++++|+|+ ++++|++|+++++++|+++
T Consensus 401 ~~~~~~~~~---~~~lRis~--~~~~t~edi~~~~~~l~~~ 436 (438)
T 1wyu_A 401 ATPVPREYG---ENLALFAA--TELHEEEDLLALREALKEV 436 (438)
T ss_dssp CEECCTTSC---SSEEEEEC--CTTCCHHHHHHHHHHHHHH
T ss_pred ccccccccC---CCeEEEEe--cccCCHHHHHHHHHHHHHH
Confidence 13333222 37999999 6899999999999999876
No 56
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.89 E-value=1.5e-21 Score=197.47 Aligned_cols=288 Identities=14% Similarity=0.100 Sum_probs=195.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..+++++||+++..++.++.. +++.|+++...|.++..+++..|. +++.++. +|+++|
T Consensus 107 ~~i~~~sGs~a~~~~~~~~~~--------------~gd~v~~~~~~~~~~~~~~~~~g~---~~~~~~~-----~d~~~l 164 (401)
T 1fc4_A 107 DAILYSSCFDANGGLFETLLG--------------AEDAIISDALNHASIIDGVRLCKA---KRYRYAN-----NDMQEL 164 (401)
T ss_dssp EEEEESCHHHHHHTTHHHHCC--------------TTCEEEEETTCCHHHHHHHHTSCS---EEEEECT-----TCHHHH
T ss_pred cEEEeCChHHHHHHHHHHHcC--------------CCCEEEEcchhHHHHHHHHHHcCC---ceEEECC-----CCHHHH
Confidence 457888899998887766532 567899999999999998887777 6777763 489999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccc-cccchhhhhcCC-CCccEEEEC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLI-FSEKYSFVLKGI-NRANSVSWN 161 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~-~~~~~~~~~~~~-~~aD~~~~s 161 (448)
++.+++..+.+.++++|++++++|++|.+.|+++|.++|++||+++++|++|+.+.. ..........++ ...|+++.+
T Consensus 165 ~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s 244 (401)
T 1fc4_A 165 EARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGT 244 (401)
T ss_dssp HHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEE
T ss_pred HHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEec
Confidence 999976433333588999999999999999999999999999999999999975543 111100111122 246899999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+||+++++.| |+++.+ +++.........++....
T Consensus 245 ~sK~~~~~~g-G~~~~~-~~~~~~l~~~~~~~~~~~-------------------------------------------- 278 (401)
T 1fc4_A 245 LGKALGGASG-GYTAAR-KEVVEWLRQRSRPYLFSN-------------------------------------------- 278 (401)
T ss_dssp SSSTTCSSSC-EEEEEC-HHHHHHHHHHCHHHHHSC--------------------------------------------
T ss_pred chhhccCCCC-EEEEcC-HHHHHHHHHhCcCceeCC--------------------------------------------
Confidence 9999966666 887774 444333221111111000
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
+.+.+.+..+..+++.... .+++.+
T Consensus 279 -----------------------------------------------------~~~~~~~~a~~~~l~~~~~--~~~~~~ 303 (401)
T 1fc4_A 279 -----------------------------------------------------SLAPAIVAASIKVLEMVEA--GSELRD 303 (401)
T ss_dssp -----------------------------------------------------CCCHHHHHHHHHHHHHHHT--CHHHHH
T ss_pred -----------------------------------------------------CCCHHHHHHHHHHHHHHhc--CHHHHH
Confidence 0001111222223333322 366778
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCc
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHR 401 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~ 401 (448)
+..++++++.+.|+++ |++++ ++..+++.+.+. ... ...++.+.|.++| +.+.+....+.
T Consensus 304 ~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~-~~~---------------~~~~l~~~l~~~g-i~v~~~~~~~~ 363 (401)
T 1fc4_A 304 RLWANARQFREQMSAA-GFTLA--GADHAIIPVMLG-DAV---------------VAQKFARELQKEG-IYVTGFFYPVV 363 (401)
T ss_dssp HHHHHHHHHHHHHHHT-TCCBC--CSSSSEEEEEEE-CHH---------------HHHHHHHHHHHTT-EECCEECTTSS
T ss_pred HHHHHHHHHHHHHHHc-CCccc--CCCCCEEEEEcC-ChH---------------HHHHHHHHHHHCC-cEEeeecCCCC
Confidence 8889999999999998 88775 345555555442 110 1236888999998 55554433221
Q ss_pred -ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 402 -NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 402 -~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
...+++|+++ +.+++++|+++++++|+++.+++
T Consensus 364 ~~~~~~iRi~~--~~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 364 PKGQARIRTQM--SAAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp CTTCEEEEEEC--CTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCceEEEEe--CCCCCHHHHHHHHHHHHHHHHHh
Confidence 1136899999 67899999999999999988765
No 57
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.89 E-value=9.7e-22 Score=198.85 Aligned_cols=287 Identities=10% Similarity=0.065 Sum_probs=192.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec------CCCCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT------NERGQ 77 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~------~~~g~ 77 (448)
..++|+|||+++..++.++.. +++.|+++...|.++...++..|. +++.+|. ++++.
T Consensus 104 ~i~~~~g~~~a~~~~~~~l~~--------------~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~ 166 (407)
T 3nra_A 104 GLIITPGTQGALFLAVAATVA--------------RGDKVAIVQPDYFANRKLVEFFEG---EMVPVQLDYVSADETRAG 166 (407)
T ss_dssp SEEEESHHHHHHHHHHHTTCC--------------TTCEEEEEESCCTHHHHHHHHTTC---EEEEEEBCCCSSCCSSCC
T ss_pred cEEEeCCcHHHHHHHHHHhCC--------------CCCEEEEcCCcccchHHHHHHcCC---EEEEeecccccccCcCCC
Confidence 689999999999888765432 567899999999999999999998 7889998 46788
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhh--hc-C
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFV--LK-G 151 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~--~~-~ 151 (448)
+|+++|++++++ ++++|++++++|++|.+.| +++|+++|++||+++++|++|+.+.......... +. .
T Consensus 167 ~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~ 240 (407)
T 3nra_A 167 LDLTGLEEAFKA------GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAV 240 (407)
T ss_dssp BCHHHHHHHHHT------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTS
T ss_pred cCHHHHHHHHhh------CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcc
Confidence 999999999975 4778999999999999988 9999999999999999999998755421111000 00 1
Q ss_pred CCCccEEEECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHh
Q psy14299 152 INRANSVSWNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKAR 230 (448)
Q Consensus 152 ~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (448)
....++++.+++|+++.| ..+|+++.+ +.+..........+.... .
T Consensus 241 ~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~-------------------~------------- 287 (407)
T 3nra_A 241 DAENVVTIMGPSKTESLSGYRLGVAFGS-RAIIARMEKLQAIVSLRA-------------------A------------- 287 (407)
T ss_dssp CGGGEEEEECSSSTTCCGGGCCEEEEEC-HHHHHHHHHHHHHHTSSS-------------------C-------------
T ss_pred cCCcEEEEeCcccccCCCeeeEEEEEcC-HHHHHHHHHHHhhhccCC-------------------C-------------
Confidence 123568889999999844 456777664 333332211000000000 0
Q ss_pred ChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHH
Q psy14299 231 GNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKA 310 (448)
Q Consensus 231 g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (448)
.+.. ..+..+++
T Consensus 288 ---~~~~----------------------------------------------------------------~a~~~~l~- 299 (407)
T 3nra_A 288 ---GYSQ----------------------------------------------------------------AVLRGWFD- 299 (407)
T ss_dssp ---HHHH----------------------------------------------------------------GGGGGTTC-
T ss_pred ---hHHH----------------------------------------------------------------HHHHHHHh-
Confidence 0000 00000000
Q ss_pred hcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeecc-CCCccccchhhhhhhhhhhHHHHHHHHh-C
Q psy14299 311 RGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPV-SLRDKVEDETWWSTLSKVAPRIKEKLVL-G 388 (448)
Q Consensus 311 ~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~L~~-~ 388 (448)
.....++++.++..++++++.+.|+++|+++++ . +..+.+.+...+. +.+ ..++.+.|.+ .
T Consensus 300 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~-~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~~ 362 (407)
T 3nra_A 300 EAPGWMEDRIARHQAIRDELLHVLRGCEGVFAR-T-PQAGSYLFPRLPKLAVA---------------PAEFVKILRLQA 362 (407)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCC-C-CSBSSEECCBCCCBSSC---------------HHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhcCCCceec-c-CCeeEEEEEeCCCCCCC---------------HHHHHHHHHHhC
Confidence 112446777888889999999999999998875 3 3333333311121 111 2367888876 4
Q ss_pred CcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 389 GTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 389 g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
| +.+.++...+...++++|++++ ++++|++++++.|+++.+++
T Consensus 363 g-i~v~~g~~~~~~~~~~iRis~~----~~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 363 G-VVVTPGTEFSPHTADSVRLNFS----QDHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp C-EECEEGGGTCTTCTTBEEEECC----SCHHHHHHHHHHHHHHHHHH
T ss_pred C-EEEeCchhhCCCCCCEEEEEeC----CCHHHHHHHHHHHHHHHHHh
Confidence 8 5555544333222479999994 28999999999999988764
No 58
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.89 E-value=2.4e-21 Score=195.86 Aligned_cols=286 Identities=12% Similarity=0.091 Sum_probs=194.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.+++|+|||+++..++.++.. +++.|+++...|.++..+++..|. +++.+|. +|+++|
T Consensus 105 ~v~~~~ggt~a~~~~~~~~~~--------------~gd~V~~~~p~~~~~~~~~~~~g~---~~~~v~~-----~d~~~l 162 (398)
T 3a2b_A 105 AAILFSTGFQSNLGPLSCLMG--------------RNDYILLDERDHASIIDGSRLSFS---KVIKYGH-----NNMEDL 162 (398)
T ss_dssp EEEEESSHHHHHHHHHHHSSC--------------TTCEEEEETTCCHHHHHHHHHSSS---EEEEECT-----TCHHHH
T ss_pred cEEEECCHHHHHHHHHHHHhC--------------CCCEEEECCccCHHHHHHHHHcCC---ceEEeCC-----CCHHHH
Confidence 478999999999988876533 567899999999999999999888 7888876 589999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccc-cchhhhhcCC-CCccEEEEC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFS-EKYSFVLKGI-NRANSVSWN 161 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~-~~~~~~~~~~-~~aD~~~~s 161 (448)
++++++..+ .++++|++++++|++|.+.|+++|.++|++||+++++|++|+.+.+.. ........++ +.+|+++.+
T Consensus 163 ~~~l~~~~~--~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s 240 (398)
T 3a2b_A 163 RAKLSRLPE--DSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGT 240 (398)
T ss_dssp HHHHHTSCS--SSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEE
T ss_pred HHHHHhhcc--CCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEec
Confidence 999975211 157899999999999999999999999999999999999998764311 1100111122 136999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+||+++ |.| |+++.++ ++..........+..... .. ...
T Consensus 241 ~sK~~~-~~G-G~~~~~~-~~~~~l~~~~~~~~~~~~-----------------~~--~~~------------------- 279 (398)
T 3a2b_A 241 FSKSLA-SLG-GFVAGDA-DVIDFLKHNARSVMFSAS-----------------MT--PAS------------------- 279 (398)
T ss_dssp SSSTTC-SSC-EEEEECH-HHHHHHHHHCHHHHSSBC-----------------CC--HHH-------------------
T ss_pred cccccc-CCC-cEEEeCH-HHHHHHHHhcccceecCC-----------------CC--HHH-------------------
Confidence 999998 666 8877754 433332211111110000 00 000
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
...+..+++.. +.++++.+
T Consensus 280 -----------------------------------------------------------~a~~~~~l~~~--~~~~~~~~ 298 (398)
T 3a2b_A 280 -----------------------------------------------------------VASTLKALEII--QNEPEHIE 298 (398)
T ss_dssp -----------------------------------------------------------HHHHHHHHHHH--HHCTHHHH
T ss_pred -----------------------------------------------------------HHHHHHHHHHH--hhCHHHHH
Confidence 00111222221 12445677
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCC-
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQH- 400 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g- 400 (448)
+..++++++.+.|+++ |++++ . +....+.+.+ +.+. ...++.+.|.++| +.+.+....+
T Consensus 299 ~~~~~~~~l~~~L~~~-g~~~~-~-~~g~~~~~~~-~~~~---------------~~~~l~~~l~~~g-i~v~~~~~~~~ 358 (398)
T 3a2b_A 299 KLWKNTDYAKAQLLDH-GFDLG-A-TESPILPIFI-RSNE---------------KTFWVTKMLQDDG-VFVNPVVSPAV 358 (398)
T ss_dssp HHHHHHHHHHHHHHHT-TCCBC-S-CCSSEEEEEC-CCHH---------------HHHHHHHHHHHTT-EECEEECTTTS
T ss_pred HHHHHHHHHHHHHHhc-CCCcC-C-CCCCEEEEEc-CCHH---------------HHHHHHHHHHHCC-cEEEeeCCCCC
Confidence 8888999999999998 88875 3 4444444443 2111 1247888999998 5555543321
Q ss_pred cccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 401 RNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 401 ~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
....+++|+++ +.+++++|+++++++|+++.++++
T Consensus 359 ~~~~~~iRis~--~~~~~~e~i~~~~~~l~~~l~~~~ 393 (398)
T 3a2b_A 359 PAEESLIRFSL--MATHTYDQIDEAIEKMVKVFKQAE 393 (398)
T ss_dssp CGGGCEEEEEC--CTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCceEEEEE--eCCCCHHHHHHHHHHHHHHHHHhC
Confidence 11237999999 568999999999999999987654
No 59
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.89 E-value=3.1e-22 Score=208.69 Aligned_cols=298 Identities=13% Similarity=0.066 Sum_probs=193.0
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHH--------HHHHhCCCCCcEEEEecC-CCC
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLK--------AAHWLGIGMDNVIRVKTN-ERG 76 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~--------~~~~~g~~~~~v~~v~~~-~~g 76 (448)
+++++|+.+|+.++.+..+ |++.|++++.+|.+... .+...|... .++.++++ +++
T Consensus 114 V~~~sGs~an~~~~~all~--------------pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~-~~v~~~~~~~~~ 178 (483)
T 1rv3_A 114 VQPYSGSPANFAVYTALVE--------------PHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFF-ESMAYKVNPDTG 178 (483)
T ss_dssp CCCSSHHHHHHHHHHHHTC--------------TTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHS-EEEEECBCTTTC
T ss_pred EEECCcHHHHHHHHHHhcC--------------CCCEEEEecCccCcCcchhhhhcccCcccccceE-EEEECccccCCC
Confidence 4455555888777766533 67889999988887653 223334201 34444446 578
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCcc
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRAN 156 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD 156 (448)
.+|+++|++++.+. +|++|++ ++++++ .+.|+++|.++|++||+++++|+||+.+....+.....+ ..+|
T Consensus 179 ~iD~d~le~~i~~~-----~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~---~~~d 248 (483)
T 1rv3_A 179 YIDYDRLEENARLF-----HPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPF---EHCH 248 (483)
T ss_dssp SBCHHHHHHHHHHH-----CCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGG---GTCS
T ss_pred cCCHHHHHHHHhhc-----CCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCC---CCCc
Confidence 99999999999742 5788888 777777 889999999999999999999999997766443222111 2479
Q ss_pred EEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHH
Q psy14299 157 SVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 236 (448)
Q Consensus 157 ~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~ 236 (448)
++++++||++.+|.| |+++++++. .. . ....+ ... .+ .+.
T Consensus 249 iv~~s~~K~l~Gprg-G~i~~~~~~-~~-~-~~~~g---~~~------------------~y---------------~~~ 288 (483)
T 1rv3_A 249 VVTTTTHKTLRGCRA-GMIFYRRGV-RS-V-DPKTG---KEI------------------LY---------------NLE 288 (483)
T ss_dssp EEEEESSGGGCCCSC-EEEEEECSB-CC------------CC------------------BC---------------CHH
T ss_pred EEEecCcccCCCCCc-eEEEEcchh-hh-h-ccccC---cch------------------hh---------------HHH
Confidence 999999999999998 999987752 11 0 00000 000 00 000
Q ss_pred HHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcccccc-chhhHHHHHHHHHhcCcc
Q psy14299 237 HFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGR-KVDAFKLWLMWKARGNLG 315 (448)
Q Consensus 237 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~G 315 (448)
..++.... .+ .++++ ...+.++..+++.....+
T Consensus 289 ~~~~~~~~--------------------------------------------~~--~~g~~~~~~iaal~~Al~~~~~~~ 322 (483)
T 1rv3_A 289 SLINSAVF--------------------------------------------PG--LQGGPHNHAIAGVAVALKQAMTPE 322 (483)
T ss_dssp HHHHHHHT--------------------------------------------TT--TCCSCCHHHHHHHHHHHHHHTSHH
T ss_pred HHhhhhcC--------------------------------------------Cc--ccCCccHHHHHHHHHHHHHHhChh
Confidence 00100000 00 01222 233455667888877789
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCc-eeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEE
Q psy14299 316 FRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQ-CTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIG 394 (448)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~ 394 (448)
++++.++..++++++.+.|.++ |++++ .+.. ...+.+.+.+.+++ ..++.+.|.+.| +.+.
T Consensus 323 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~v~~~~~g~~---------------~~~~~~~L~~~g-I~v~ 384 (483)
T 1rv3_A 323 FKEYQRQVVANCRALSAALVEL-GYKIV-TGGSDNHLILVDLRSKGTD---------------GGRAEKVLEACS-IACN 384 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCEEG-GGSCSSSEEEEEGGGGTCC---------------HHHHHHHHHHTT-EECE
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCEec-cCCCCCceEEEeccCCCCC---------------HHHHHHHHHhCC-cEEe
Confidence 9999999999999999999998 99987 4322 23333433332222 135677787888 5554
Q ss_pred ----eeecCCcccccEEEEEecCCCCCC----HHHHHHHHHHHHHHHHH
Q psy14299 395 ----YQPLQHRNLHNFFRLVTTCHPASS----RQDMDYAIDQIELRGAE 435 (448)
Q Consensus 395 ----~~~~~g~~~~~~lRis~~~~~~~t----~edid~l~~al~~~~~~ 435 (448)
++.. ....++++|+|+. .++| ++|+++++++|+++.+.
T Consensus 385 ~~~~pg~~-~~~~~~~iRis~~--~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 385 KNTCPGDK-SALRPSGLRLGTP--ALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp EECCSSCS-CTTSCCEEEEECH--HHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCC-cCCCCceEEeecC--CcccCCCCHHHHHHHHHHHHHHHHh
Confidence 3221 0011378999994 5677 99999999999998765
No 60
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.89 E-value=1.9e-21 Score=197.37 Aligned_cols=284 Identities=13% Similarity=0.030 Sum_probs=194.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
.+++|+|||+++..++.++.. +++.|+++..+|.++...++..|. +++.+|.++ ++.+|++
T Consensus 103 ~v~~t~g~~~al~~~~~~l~~--------------~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~ 165 (406)
T 1xi9_A 103 DVRVTAAVTEALQLIFGALLD--------------PGDEILVPGPSYPPYTGLVKFYGG---KPVEYRTIEEEDWQPDID 165 (406)
T ss_dssp GEEEESHHHHHHHHHHHHHCC--------------TTCEEEEEESCCHHHHHHHHHTTC---EEEEEEEEGGGTSEECHH
T ss_pred HEEEcCChHHHHHHHHHHhCC--------------CCCEEEEcCCCCccHHHHHHHcCC---EEEEeecCCCcCCcCCHH
Confidence 578999999999988877632 567789999999999999999888 788888864 4578999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchh-hhhcCCCCc-c
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYS-FVLKGINRA-N 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~-~~~~~~~~a-D 156 (448)
+|++++++ ++++|++++++|++|.+.| +++|.++|++||+++++|++|+.+....+... ..+. ... |
T Consensus 166 ~l~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~ 237 (406)
T 1xi9_A 166 DIRKKITD------RTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLT--KDVPV 237 (406)
T ss_dssp HHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHC--SSSCE
T ss_pred HHHHhhCc------CceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcC--CCceE
Confidence 99999854 4788999999999999866 99999999999999999999987654111000 1111 235 7
Q ss_pred EEEECCccccCCCCc--eEEEEE-ecc----chhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHH
Q psy14299 157 SVSWNPHKMLGAPLQ--CSILLI-KEK----GLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKA 229 (448)
Q Consensus 157 ~~~~s~hK~l~~P~g--~G~l~v-r~~----~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (448)
+++.++||+++ ++| +|++++ .++ ++........ .+.
T Consensus 238 i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~l~~~l~~~~-~~~----------------------------------- 280 (406)
T 1xi9_A 238 IVMNGLSKVYF-ATGWRLGYMYFVDPENKLSEVREAIDRLA-RIR----------------------------------- 280 (406)
T ss_dssp EEEEESTTTTC-CGGGCCEEEEEECTTCTTHHHHHHHHHHH-HHT-----------------------------------
T ss_pred EEEeccccccC-CCccEEEEEEEecCchhHHHHHHHHHHHH-Hhh-----------------------------------
Confidence 88899999987 344 788773 233 3322211000 000
Q ss_pred hChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHH
Q psy14299 230 RGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWK 309 (448)
Q Consensus 230 ~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (448)
.+.+.+.+..+..+++
T Consensus 281 ----------------------------------------------------------------~~~~~~~~~a~~~~l~ 296 (406)
T 1xi9_A 281 ----------------------------------------------------------------LCPNTPAQFAAIAGLT 296 (406)
T ss_dssp ----------------------------------------------------------------CCSCSHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------cCCCHHHHHHHHHHHh
Confidence 0011111222223333
Q ss_pred HhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeecc--CCCccccchhhhhhhhhhhHHHHHHHH-
Q psy14299 310 ARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPV--SLRDKVEDETWWSTLSKVAPRIKEKLV- 386 (448)
Q Consensus 310 ~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~L~- 386 (448)
. +.++++++.++..++++++.+.|+++|+++++ .+..+.+.+...+. +.+ ..++.+.|.
T Consensus 297 ~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---------------~~~l~~~l~~ 358 (406)
T 1xi9_A 297 G-PMDYLKEYMKKLKERRDYIYKRLNEIPGISTT--KPQGAFYIFPKIEVGPWKN---------------DKEFVLDVLH 358 (406)
T ss_dssp S-CCHHHHHHHHHHHHHHHHHHHHHHTSTTEECC--CCCBSSEECCEECSCSCSS---------------HHHHHHHHHH
T ss_pred C-CcHHHHHHHHHHHHHHHHHHHHHHhCCCCeee--cCCeeEEEEEecCccCCCC---------------HHHHHHHHHH
Confidence 2 23457778888899999999999999999875 34445554421121 111 236788887
Q ss_pred hCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 387 LGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 387 ~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
++| +.+.++...+...++++|+++ + +++++++++++.|+++.+++
T Consensus 359 ~~g-i~v~~g~~f~~~~~~~lRis~--~--~~~~~i~~~~~~l~~~l~~~ 403 (406)
T 1xi9_A 359 NAH-VLFVHGSGFGEYGAGHFRAVF--L--PPIEILEEAMDRFEKFMKER 403 (406)
T ss_dssp HHC-EECEEGGGGCGGGTTBEEEEC--C--SCHHHHHHHHHHHHHHHHHC
T ss_pred hCC-EEEeCchhcCCCCCCEEEEEe--c--CCHHHHHHHHHHHHHHHHHH
Confidence 778 555544332211237899999 4 79999999999999988764
No 61
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.89 E-value=2.2e-21 Score=195.30 Aligned_cols=282 Identities=12% Similarity=0.056 Sum_probs=191.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
.+++|+|||+++..++.++.. +++.|+++..+|+++...++..|. +++.+|.++ ++.+|++
T Consensus 92 ~v~~~~g~~~a~~~~~~~~~~--------------~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~ 154 (388)
T 1j32_A 92 NILVTNGGKQSIFNLMLAMIE--------------PGDEVIIPAPFWVSYPEMVKLAEG---TPVILPTTVETQFKVSPE 154 (388)
T ss_dssp GEEEESHHHHHHHHHHHHHCC--------------TTCEEEEESSCCTHHHHHHHHTTC---EEEEECCCGGGTTCCCHH
T ss_pred hEEEcCCHHHHHHHHHHHhcC--------------CCCEEEEcCCCChhHHHHHHHcCC---EEEEecCCcccCCCCCHH
Confidence 478999999999998877633 566789999999999999999888 788898875 5689999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCcccccc---CHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCC----CC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFD---PLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGI----NR 154 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~---~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~----~~ 154 (448)
+|++++++ ++++|++++++|++|.+. ++++|.++|++||+++++|++|+.+......... +..+ ..
T Consensus 155 ~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~ 227 (388)
T 1j32_A 155 QIRQAITP------KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLS-IGAASPEAYE 227 (388)
T ss_dssp HHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHH
T ss_pred HHHHhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCC-HHHccccccC
Confidence 99999854 478999999999999985 4999999999999999999999875442111000 0011 13
Q ss_pred ccEEEECCccccCCCCc--eEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhCh
Q psy14299 155 ANSVSWNPHKMLGAPLQ--CSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 232 (448)
Q Consensus 155 aD~~~~s~hK~l~~P~g--~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 232 (448)
.|+++.++||+++ ++| +|+++++++ +..........+ .++ ...+
T Consensus 228 ~~~~~~s~sK~~~-~~G~r~G~~~~~~~-~~~~l~~~~~~~---------------~~~------~~~~----------- 273 (388)
T 1j32_A 228 RSVVCSGFAKTYA-MTGWRVGFLAGPVP-LVKAATKIQGHS---------------TSN------VCTF----------- 273 (388)
T ss_dssp TEEEEEESTTTTT-CTTTCCEEEECCHH-HHHHHHHHHHTT---------------TCS------CCHH-----------
T ss_pred CEEEEeechhccC-CcccceEEEEeCHH-HHHHHHHHHhhc---------------ccC------CCHH-----------
Confidence 6899999999986 445 888877543 332221100000 000 0000
Q ss_pred HHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhc
Q psy14299 233 LGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARG 312 (448)
Q Consensus 233 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (448)
....+..+++. +
T Consensus 274 -------------------------------------------------------------------~~~a~~~~l~~-~ 285 (388)
T 1j32_A 274 -------------------------------------------------------------------AQYGAIAAYEN-S 285 (388)
T ss_dssp -------------------------------------------------------------------HHHHHHHHHHS-C
T ss_pred -------------------------------------------------------------------HHHHHHHHHhC-C
Confidence 01111122221 2
Q ss_pred CccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeecc-CCCccccchhhhhhhhhhhHHHHHHHHh-CCc
Q psy14299 313 NLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPV-SLRDKVEDETWWSTLSKVAPRIKEKLVL-GGT 390 (448)
Q Consensus 313 ~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~L~~-~g~ 390 (448)
.++++++.++..++++++.+.|+++||++++ .+..+.+.+...+. +. ...++.+.|.+ +|
T Consensus 286 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~~~~~~~~~~~~~~---------------~~~~~~~~l~~~~g- 347 (388)
T 1j32_A 286 QDCVQEMLAAFAERRRYMLDALNAMPGLECP--KPDGAFYMFPSIAKTGR---------------SSLDFCSELLDQHQ- 347 (388)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTCTTCBCC--CCCBTTEECCBCGGGTC---------------CHHHHHHHHHHHHC-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhCCCCccc--CCCeeEEEEEecCCCCC---------------CHHHHHHHHHHhCC-
Confidence 3456778888899999999999999999875 34444443321111 11 12368888886 68
Q ss_pred EEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 391 LMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 391 ~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
+.+.++...+. ++++|+++ . +++++++++++.|+++.++
T Consensus 348 i~v~~g~~~~~--~~~iRis~--~--~~~~~i~~~~~~l~~~l~~ 386 (388)
T 1j32_A 348 VATVPGAAFGA--DDCIRLSY--A--TDLDTIKRGMERLEKFLHG 386 (388)
T ss_dssp EECEEGGGGTC--TTBEEEEC--C--SCHHHHHHHHHHHHHHHHH
T ss_pred EEEeChhhhCC--CCcEEEEe--c--CCHHHHHHHHHHHHHHHHH
Confidence 55554432221 37899999 3 5899999999999988765
No 62
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.89 E-value=1.6e-22 Score=208.70 Aligned_cols=274 Identities=12% Similarity=0.029 Sum_probs=184.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec--CCC----CC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT--NER----GQ 77 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~--~~~----g~ 77 (448)
..++|+|+|++|..++.++.. +++.|++++.+|.++..++...|. +++.++. +++ +.
T Consensus 74 ~v~~~~G~t~a~~~~~~a~~~--------------~gd~Vlv~~~~h~s~~~~~~~~G~---~~~~v~~~~~~~~~~~~~ 136 (446)
T 2x3l_A 74 GYFLVNGTTSGILSVIQSFSQ--------------KKGDILMARNVHKSVLHALDISQQ---EGHFIETHQSPLTNHYNK 136 (446)
T ss_dssp EEEESSHHHHHHHHHHHTTTT--------------SSSCEEECTTCCHHHHHHHHHHTC---CEEECEEEECTTTSSEEE
T ss_pred eEEEeCCHHHHHHHHHHHhcC--------------CCCEEEEecCccHHHHHHHHHcCC---eEEEEeCeeccccCcCCC
Confidence 468899999999999877643 567799999999999999999998 6778887 655 67
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccE
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
+|+++| +. .++++|++++ .|++|.+.|+++|.++|++||+++|+|+||+.+..+.+. ....... .+|+
T Consensus 137 ~d~~~l---~~------~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~~~-g~Di 204 (446)
T 2x3l_A 137 VNLSRL---NN------DGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTLNY-QADY 204 (446)
T ss_dssp EEC----------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGGGG-TCSE
T ss_pred CCHHHH---cC------CCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCChHHc-CCCE
Confidence 898887 22 2478899998 566999999999999999999999999999983222221 1111111 3799
Q ss_pred EEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 158 VSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 158 ~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
++.|+||++++|.|+|+++++++.............+ . .+.+
T Consensus 205 ~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~~~~-~-----------------~~s~-------------------- 246 (446)
T 2x3l_A 205 VVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYLSYF-Q-----------------TSSP-------------------- 246 (446)
T ss_dssp EEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHHHHH-S-----------------CSSC--------------------
T ss_pred EEECCccccccccccEEEEEcCCcCCHHHHHHHHHHH-c-----------------CCCc--------------------
Confidence 9999999999999999999977532100000000000 0 0000
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
.......+..+++++...|.+
T Consensus 247 -----------------------------------------------------------~~~~~aal~~a~~~l~~~g~~ 267 (446)
T 2x3l_A 247 -----------------------------------------------------------SYLIMASLESAAQFYKTYDST 267 (446)
T ss_dssp -----------------------------------------------------------CHHHHHHHHHHHHHHHHCCCH
T ss_pred -----------------------------------------------------------hHHHHHHHHHHHHHHHHhCHH
Confidence 011112233344555556777
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
++.++..++++++++. |++++ .+.....+.+.+. +.+ ..++.+.|.++| +.+...
T Consensus 268 ~~~~~~~~l~~~l~~~-----g~~~~-~~~~~~~l~i~~~--~~~---------------~~~l~~~L~~~G-I~v~~~- 322 (446)
T 2x3l_A 268 LFFAKRAQLIECLENK-----GFEML-QVDDPLKLLIKYE--GFT---------------GHDIQNWFMNAH-IYLELA- 322 (446)
T ss_dssp HHHHHHHHHHHHHHHH-----TCEEE-ECSSTTEEEEECT--TSC---------------HHHHHHHHHHTT-EEESEE-
T ss_pred HHHHHHHHHHHHHHHc-----CCEEC-cCCCCeEEEEEeC--CcC---------------HHHHHHHHHHCC-CEEEec-
Confidence 7788888888888887 78876 3322223444331 222 236888898888 444311
Q ss_pred cCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 398 LQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 398 ~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
+. +++|+++ +.++|++|+ +++++|+++.+.+
T Consensus 323 --g~---~~iRi~~--~~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 323 --DD---YQALAIL--PLWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp --CS---SCEEEEC--CCCCTTCCC-CHHHHHHHHHTCC
T ss_pred --CC---CEEEEEe--ecCCCHHHH-HHHHHHHHHHHhh
Confidence 22 6899999 678999999 9999999998655
No 63
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.89 E-value=4.3e-22 Score=216.17 Aligned_cols=311 Identities=14% Similarity=0.041 Sum_probs=198.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH-HHHhCCCCCcEEEEecCCC-----CC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA-AHWLGIGMDNVIRVKTNER-----GQ 77 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~-~~~~g~~~~~v~~v~~~~~-----g~ 77 (448)
..++++|+|++|..++.+... +++.|++++..|.|+..+ +++.|. +++.++.+.+ |.
T Consensus 191 ~i~v~nGtt~an~~ai~al~~--------------pGD~VLv~~~~H~S~~~~~~~l~Ga---~~v~v~~~~~~~~i~g~ 253 (730)
T 1c4k_A 191 TYFVLGGSSNANNTVTSALVS--------------NGDLVLFDRNNHKSVYNSALAMAGG---RPVYLQTNRNPYGFIGG 253 (730)
T ss_dssp EEEESSHHHHHHHHHHHHHCC--------------TTCEEEEETTCCHHHHHHHTTTTCC---EEEEECEEECTTCCEEE
T ss_pred EEEECCHHHHHHHHHHHHhcC--------------CCCEEEEcCCchHHHHHHHHHHCCC---EEEEEeCCccccCccCC
Confidence 356677777899888877543 677899999999999998 777777 6777765432 45
Q ss_pred cCHHHH-----HHHHHHh-hh--cCCCc-EEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchh--
Q psy14299 78 MICSFL-----EQTIQTS-LA--EKKIP-LFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYS-- 146 (448)
Q Consensus 78 id~e~L-----e~~l~~~-~~--~~~~~-~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~-- 146 (448)
+|+++| +++|++. .+ ...++ ++|+++++ |++|.+.|+++|+++|++||+++|||+||+.+..+.+..+
T Consensus 254 id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~ 332 (730)
T 1c4k_A 254 IYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNS 332 (730)
T ss_dssp ECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGG
T ss_pred CCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCcccCCc
Confidence 899998 7777542 11 01123 78888887 4699999999999999999999999999987644333221
Q ss_pred hhhcC-CCCcc----EEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhH
Q psy14299 147 FVLKG-INRAN----SVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAF 221 (448)
Q Consensus 147 ~~~~~-~~~aD----~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (448)
..+.. ...+| +++.|+||++++|.+.|+++++++.+.. ...++..
T Consensus 333 ~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g-----~~~~i~~------------------------- 382 (730)
T 1c4k_A 333 SPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKG-----QLRYCDH------------------------- 382 (730)
T ss_dssp CTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTT-----STTCCCH-------------------------
T ss_pred CcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcC-----cccccCH-------------------------
Confidence 00110 01367 9999999999999999999998864210 0011100
Q ss_pred HHHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhh
Q psy14299 222 KLWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDA 301 (448)
Q Consensus 222 ~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (448)
..+....... . -..++...+
T Consensus 383 -----------~~~~~~~~~~-~------------------------------------------------stsp~~~~i 402 (730)
T 1c4k_A 383 -----------KHFNNSFNLF-M------------------------------------------------STSPFYPMY 402 (730)
T ss_dssp -----------HHHHHHHHHH-S------------------------------------------------CSSCCHHHH
T ss_pred -----------HHHHHHHHHh-C------------------------------------------------CCCCcHHHH
Confidence 0000000000 0 000112233
Q ss_pred HHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhc-CCCeEEeccCCc--------------------------------
Q psy14299 302 FKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQ-RPGFRLVIPEFQ-------------------------------- 348 (448)
Q Consensus 302 ~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~-~pg~~l~~~~~~-------------------------------- 348 (448)
.++..+++.+..++-++..++..++++++++.|++ ++|++++ .+..
T Consensus 403 aal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 481 (730)
T 1c4k_A 403 AALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPF-VPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAY 481 (730)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEES-SCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCC
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEc-cccccccccccccccccccccchhhccCccchhccc
Confidence 44555666666534456678899999999999998 7999986 3321
Q ss_pred ----ee---e----EEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCC
Q psy14299 349 ----CT---N----ICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPAS 417 (448)
Q Consensus 349 ----~~---~----v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~ 417 (448)
.+ + ++|.. | +++.. .......+....++.+.|.++| +++... +. ..+|+++ |+++
T Consensus 482 ~~~~~~~~~idp~kv~i~~-p-g~~~~---~g~~~~~g~~~~~l~~~L~e~G-I~v~~~---~~---~~ir~~~--s~g~ 547 (730)
T 1c4k_A 482 EGYGDNQYYVDPNKFMLTT-P-GINPE---TGDYEDFGVPATIVANYLRDHG-IIPEKS---DL---NSILFLM--TPAE 547 (730)
T ss_dssp TTCCTTCEEECTTEEEEEC-S-SEETT---TTEECSSCCCHHHHHHHHHHTT-CCCSEE---CS---SEEEEEC--CTTC
T ss_pred cccCCcccccCCeEEEEEe-C-Ccccc---cccccccCCCHHHHHHHHHHCC-cEEEEC---CC---CeEEEEe--CCCC
Confidence 00 0 23322 1 11000 0000001112347888999988 444332 22 6899999 8999
Q ss_pred CHHHHHHHHHHHHHHHHHhH
Q psy14299 418 SRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 418 t~edid~l~~al~~~~~~~~ 437 (448)
|++|+++|+++|+++.+...
T Consensus 548 t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 548 TPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp CHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999987764
No 64
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.89 E-value=2.6e-21 Score=197.71 Aligned_cols=160 Identities=16% Similarity=0.155 Sum_probs=120.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCC------CC-CCCeEEEecCCCchHHHHHHHH----hCCCCCcEEEEec
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGL------SH-LPPLCMFTSEDSHYSMLKAAHW----LGIGMDNVIRVKT 72 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~------~~-~~~~~Vl~~~~~H~s~~~~~~~----~g~~~~~v~~v~~ 72 (448)
.++||+|||+++..++.++.+.+.....+.|- +. .....|+++..+|+|+..++.. .|. +++.+|.
T Consensus 80 ~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~---~v~~v~~ 156 (432)
T 3a9z_A 80 DIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVA---EVTFVPV 156 (432)
T ss_dssp GEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSC---EEEEECC
T ss_pred eEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCc---EEEEEec
Confidence 58999999999998887764210000000110 00 1124788999999999877654 355 7889998
Q ss_pred CC-CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcC----------CEEEEeccccccccc
Q psy14299 73 NE-RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYD----------LWMHVDACWGGSLIF 141 (448)
Q Consensus 73 ~~-~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g----------~~l~VD~A~~~~~~~ 141 (448)
++ ++.+|+++|++++++ ++++|++++++|++|.+.|+++|.++|+++| +++|+|++|+.+..+
T Consensus 157 ~~~~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~ 230 (432)
T 3a9z_A 157 SKVNGQVEVEDILAAVRP------TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRR 230 (432)
T ss_dssp CTTTSSCCHHHHHHTCCT------TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSC
T ss_pred CcccCCcCHHHHHHhccC------CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcc
Confidence 76 788999999998854 4889999999999999999999999999999 999999999877543
Q ss_pred ccchhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 142 SEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 142 ~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
.+.. .. .+|+++.|+||+++ |. +|+++++++
T Consensus 231 ~~~~-----~~-~~d~~~~s~~K~~g-~~-~G~~~~~~~ 261 (432)
T 3a9z_A 231 VDVE-----DL-GVDFLTIVGHKFYG-PR-IGALYVRGV 261 (432)
T ss_dssp CCHH-----HH-CCSEEEEEGGGTTC-CS-CEEEEETTB
T ss_pred cChh-----hc-CCCEEEEehhHhcC-Cc-ceEEEEccc
Confidence 3211 11 36899999999875 76 999998764
No 65
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.88 E-value=5.7e-22 Score=198.46 Aligned_cols=289 Identities=10% Similarity=0.041 Sum_probs=192.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.+++|+|||+++..++.+++. .+++.|+++..+|.++..+++..|. +++.++.++++.+|+++|
T Consensus 55 ~~~~~~~gt~a~~~~~~~~~~-------------~~gd~v~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~d~~~l 118 (374)
T 3uwc_A 55 HAIGVGTGTDALAMSFKMLNI-------------GAGDEVITCANTFIASVGAIVQAGA---TPVLVDSENGYVIDPEKI 118 (374)
T ss_dssp EEEEESCHHHHHHHHHHHTTC-------------CTTCEEEEESSSCHHHHHHHHHTTC---EEEEECBCTTSSBCGGGT
T ss_pred cEEEeCCHHHHHHHHHHHcCC-------------CCCCEEEECCCccHHHHHHHHHcCC---EEEEEecCCCCCcCHHHH
Confidence 578999999998888776522 2667899999999999999999998 799999988889999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++++++ ++++|+ +++++|.+.|+++|.++|++||+++|+|++|+.+...... . . + ...|++++++|
T Consensus 119 ~~~~~~------~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~-~--~-~-~~~d~~~~s~~ 184 (374)
T 3uwc_A 119 EAAITD------KTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDK-F--V-G-SWGQFACFSLH 184 (374)
T ss_dssp GGGCCT------TEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE-E--T-T-SSSSEEEEECS
T ss_pred HHhCCC------CceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCe-e--c-c-ccccEEEEeCC
Confidence 998854 466666 7788999999999999999999999999999977542111 1 1 1 12599999977
Q ss_pred --cccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 164 --KMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 164 --K~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
|+++++...|+++.+++.+............ ... .......+ .+.
T Consensus 185 ~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~------~~~---------------------- 231 (374)
T 3uwc_A 185 PLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGL-INR----DVCVEYGI------NCR---------------------- 231 (374)
T ss_dssp SSSSSCCSSCCEEEEESCHHHHHHHHHHTBTTE-EET----TEESSCCC------BCB----------------------
T ss_pred CCCcCCccceeEEEEeCCHHHHHHHHHHHhcCc-ccc----Cccccccc------cCC----------------------
Confidence 9998755567776665544332211000000 000 00000000 000
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
...+..++.....++++++.+
T Consensus 232 -----------------------------------------------------------~~~~~aa~~~~~~~~~~~~~~ 252 (374)
T 3uwc_A 232 -----------------------------------------------------------MDTIQAVIANRLMNQLETITE 252 (374)
T ss_dssp -----------------------------------------------------------CCHHHHHHHHHHGGGHHHHHH
T ss_pred -----------------------------------------------------------CCHHHHHHHHHHHHHHHHHHH
Confidence 001111222233456777888
Q ss_pred HHHHHHHHHHHHhhcCCC-eEEeccCCc--eee-EEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 322 NAVDCSRYFLSQISQRPG-FRLVIPEFQ--CTN-ICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg-~~l~~~~~~--~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
+..++++++.+.|+++++ +++. ..+. ... ..|..... ...++.+.|.++|+ .+.+..
T Consensus 253 ~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----------------~~~~l~~~L~~~gi-~v~~~~ 313 (374)
T 3uwc_A 253 KRRGIAHLYDQSFVDLSEFIDVP-VRREGVYHVFHIYVLRVK-----------------YRDQLFQYLKDNGI-EVKIHY 313 (374)
T ss_dssp HHHHHHHHHHHHTGGGTTTEECC-CCCTTEECCCSSEEEEET-----------------THHHHHHHHHHTTB-CCBCSC
T ss_pred HHHHHHHHHHHHhccCCCeEEec-cCCCCCceeeEEEEEEcC-----------------CHHHHHHHHHHCCC-ccccCC
Confidence 889999999999999988 8875 3222 111 22322111 12378889999984 343321
Q ss_pred c----CCc----------c-------cccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 398 L----QHR----------N-------LHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 398 ~----~g~----------~-------~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
. ... . ....+|+++ +.++|++||++++++|+++.++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~--~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 314 PIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPA--HPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp SSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECC--CTTSCHHHHHHHHHHHHHHHHT
T ss_pred CCccccChhhhhcCCccCCCccHHHHHhCEEEccC--CCCCCHHHHHHHHHHHHHHHHh
Confidence 0 000 0 016899999 7899999999999999998865
No 66
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.88 E-value=6.5e-21 Score=191.57 Aligned_cols=280 Identities=16% Similarity=0.087 Sum_probs=190.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..+++++||+++..++.+... +++.|+++...|.++..+++..|. +++.+|. +|+++|
T Consensus 101 ~~i~~~sGt~a~~~~~~~~~~--------------~gd~v~~~~~~~~~~~~~~~~~g~---~~~~~~~-----~d~~~l 158 (384)
T 1bs0_A 101 RALLFISGFAANQAVIAAMMA--------------KEDRIAADRLSHASLLEAASLSPS---QLRRFAH-----NDVTHL 158 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHCC--------------TTCEEEEETTCCHHHHHHHHTSSS---EEEEECT-----TCHHHH
T ss_pred cEEEeCCcHHHHHHHHHHhCC--------------CCcEEEEcccccHHHHHHHHHcCC---CEEEeCC-----CCHHHH
Confidence 467888889999888766432 567889999999999999998887 7878874 489999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEeccccccccc-c-cchhhhhcCCCCccEEEEC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIF-S-EKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~-~-~~~~~~~~~~~~aD~~~~s 161 (448)
++.+++. ...+++|++.+++|++|.+.|+++|.++|++||+++++|++|+.+... . ..... ..+. ..|+++.+
T Consensus 159 ~~~l~~~---~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~-~~di~~~s 233 (384)
T 1bs0_A 159 ARLLASP---CPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCW-LQKV-KPELLVVT 233 (384)
T ss_dssp HHHHHSC---CSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHH-HTTC-CCSEEEEE
T ss_pred HHHHHhc---CCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHH-hcCC-CCcEEEee
Confidence 9999752 113678888999999999999999999999999999999999876532 1 11111 1121 47899999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+||+++ |.| |++++++ ++..........|.... .
T Consensus 234 ~sK~~~-~~G-G~~~~~~-~~~~~l~~~~~~~~~~~-------------------~------------------------ 267 (384)
T 1bs0_A 234 FGKGFG-VSG-AAVLCSS-TVADYLLQFARHLIYST-------------------S------------------------ 267 (384)
T ss_dssp SSSTTS-SCC-EEEEECH-HHHHHHHHHCHHHHSSB-------------------C------------------------
T ss_pred ccchhh-ccC-cEEEeCH-HHHHHHHHhchhhhcCC-------------------C------------------------
Confidence 999998 656 8877753 44333221111111000 0
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
.+...+..+..+++.....+++++.+
T Consensus 268 ------------------------------------------------------~~~~~~~~~~~al~~~~~~~~~~~~~ 293 (384)
T 1bs0_A 268 ------------------------------------------------------MPPAQAQALRASLAVIRSDEGDARRE 293 (384)
T ss_dssp ------------------------------------------------------CCHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ------------------------------------------------------CCHHHHHHHHHHHHHHhccccHHHHH
Confidence 00111112223344433334567888
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCc
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHR 401 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~ 401 (448)
+..++++++.+.|+++ |+++. ++..+++.+.+. .+. ...++.+.|.++| +.+.+....+.
T Consensus 294 ~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~-~~~---------------~~~~l~~~l~~~g-i~v~~~~~~~~ 353 (384)
T 1bs0_A 294 KLAALITRFRAGVQDL-PFTLA--DSCSAIQPLIVG-DNS---------------RALQLAEKLRQQG-CWVTAIRPPTV 353 (384)
T ss_dssp HHHHHHHHHHHHHTTS-SCEEC--SCCSSBCCEEEE-SHH---------------HHHHHHHHHHHTT-EECCEECTTSS
T ss_pred HHHHHHHHHHHHHHhc-CCccc--CCCCCEEEEEeC-CHH---------------HHHHHHHHHHHCC-cEEEeecCCCC
Confidence 8999999999999998 88875 344455545442 111 1247888999998 55554433221
Q ss_pred -ccccEEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy14299 402 -NLHNFFRLVTTCHPASSRQDMDYAIDQIELR 432 (448)
Q Consensus 402 -~~~~~lRis~~~~~~~t~edid~l~~al~~~ 432 (448)
...+++|+++ +.+++++|+++++++|+++
T Consensus 354 ~~~~~~~Ri~~--~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 354 PAGTARLRLTL--TAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp CTTCEEECCBC--CTTCCHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEE--cCCCCHHHHHHHHHHHHhh
Confidence 1137999999 6788999999999999875
No 67
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.88 E-value=7e-21 Score=192.62 Aligned_cols=287 Identities=12% Similarity=0.115 Sum_probs=192.7
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHH
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQ 85 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~ 85 (448)
++.++|+++|..++.++... .+++.|+++..+|.++..+++..|. +++.+|.+ |+++|++
T Consensus 110 i~~~sG~~a~~~~~~~l~~~------------~~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~-----d~~~le~ 169 (401)
T 2bwn_A 110 LVFSSAYNANDATLSTLRVL------------FPGLIIYSDSLNHASMIEGIKRNAG---PKRIFRHN-----DVAHLRE 169 (401)
T ss_dssp EEESCHHHHHHHHHHHHHHH------------STTCEEEEETTCCHHHHHHHHHSCC---CEEEECTT-----CHHHHHH
T ss_pred EEECCcHHHHHHHHHHHhcC------------CCCCEEEECchhhHHHHHHHHHcCC---eEEEEcCC-----CHHHHHH
Confidence 44455666888777654331 1567899999999999999998888 78888875 8999999
Q ss_pred HHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhh-hhcCC-CCccEEEECCc
Q psy14299 86 TIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF-VLKGI-NRANSVSWNPH 163 (448)
Q Consensus 86 ~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~-~~~~~-~~aD~~~~s~h 163 (448)
.+++.. ..++++|++++++|++|.+.|+++|.++|++||+++++|++|+.+.+.-..... ...++ ...|.++.+++
T Consensus 170 ~l~~~~--~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~s 247 (401)
T 2bwn_A 170 LIAADD--PAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLA 247 (401)
T ss_dssp HHHHSC--TTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESS
T ss_pred HHHhhc--cCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeech
Confidence 997521 125789999999999999999999999999999999999999965431000000 01122 23588889999
Q ss_pred cccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHhh
Q psy14299 164 KMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNAV 243 (448)
Q Consensus 164 K~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~~ 243 (448)
|+++.|. |++.. ++.+..........+....
T Consensus 248 K~~~~~G--G~~~~-~~~~~~~l~~~~~~~~~~~---------------------------------------------- 278 (401)
T 2bwn_A 248 KAYGVFG--GYIAA-SARMVDAVRSYAPGFIFST---------------------------------------------- 278 (401)
T ss_dssp STTCSCC--EEEEE-CHHHHHHHHHHCHHHHTSB----------------------------------------------
T ss_pred hhccCCC--CEEec-CHHHHHHHHHhCcCceecC----------------------------------------------
Confidence 9998764 66555 3333222110000110000
Q ss_pred hhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHHH
Q psy14299 244 DCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 323 (448)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 323 (448)
..+.+.+.++..+++++...|++++.++.
T Consensus 279 ---------------------------------------------------~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 307 (401)
T 2bwn_A 279 ---------------------------------------------------SLPPAIAAGAQASIAFLKTAEGQKLRDAQ 307 (401)
T ss_dssp ---------------------------------------------------CCCHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred ---------------------------------------------------CCCHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 00012233344566777777888999999
Q ss_pred HHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHH-hCCcEEEEeeecCCcc
Q psy14299 324 VDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV-LGGTLMIGYQPLQHRN 402 (448)
Q Consensus 324 ~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g~~~~~~~~~~g~~ 402 (448)
.++++++.+.|+++ |++++ . +..+++.|.+. .+. ...++.+.|. ++| +.+.+....+..
T Consensus 308 ~~~~~~l~~~L~~~-g~~~~-~-~~~~~~~~~~~-~~~---------------~~~~~~~~L~~~~g-i~v~~~~~~~~~ 367 (401)
T 2bwn_A 308 QMHAKVLKMRLKAL-GMPII-D-HGSHIVPVVIG-DPV---------------HTKAVSDMLLSDYG-VYVQPINFPTVP 367 (401)
T ss_dssp HHHHHHHHHHHHHH-TCCBC-C-CSSSCEEEECC-CHH---------------HHHHHHHHHHHHHC-EECCEECTTTSC
T ss_pred HHHHHHHHHHHHHC-CCccc-C-CCCCeEEEEeC-ChH---------------HHHHHHHHHHhcCC-EEEeecCCCCCC
Confidence 99999999999998 88875 3 44566666432 110 1236888886 678 555544332221
Q ss_pred -cccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 403 -LHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 403 -~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
..+++|+++ +.++|++|+++++++|+++.+++
T Consensus 368 ~~~~~iRis~--~~~~t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 368 RGTERLRFTP--SPVHDLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp TTCCEEEECC--CTTSCHHHHHHHHHHHHHHC---
T ss_pred CCCceEEEEe--eCCCCHHHHHHHHHHHHHHHHhc
Confidence 125899999 67899999999999999886543
No 68
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.88 E-value=1.2e-20 Score=191.62 Aligned_cols=280 Identities=13% Similarity=0.064 Sum_probs=189.5
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLE 84 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le 84 (448)
.+++++||++|..++.+... +++.|+++...|.++..+++..|. +++.++. +|+++|+
T Consensus 122 ~i~~~sGt~a~~~~l~~~~~--------------~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~~~~-----~d~~~le 179 (409)
T 3kki_A 122 CLLSQSGWNANVGLLQTICQ--------------PNTNVYIDFFAHMSLWEGARYANA---QAHPFMH-----NNCDHLR 179 (409)
T ss_dssp EEEESCHHHHHHHHHHHHCC--------------TTCEEEEETTSCHHHHHHHHHTTC---EEEEECT-----TCHHHHH
T ss_pred EEEecchHHHHHHHHHHhcC--------------CCCEEEECCCcCHHHHHHHHHcCC---eEEEecC-----CCHHHHH
Confidence 57788889999888876543 677899999999999999999888 6777665 5899999
Q ss_pred HHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccch-hhhhcCC-CCccEEEECC
Q psy14299 85 QTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKY-SFVLKGI-NRANSVSWNP 162 (448)
Q Consensus 85 ~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~-~~~~~~~-~~aD~~~~s~ 162 (448)
+++++. ++++|+++++++++|.+.|+++|.++|++||+++++|++|+.+.+..... .....++ ..+|+++.++
T Consensus 180 ~~l~~~-----~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~ 254 (409)
T 3kki_A 180 MLIQRH-----GPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASL 254 (409)
T ss_dssp HHHHHH-----CSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEES
T ss_pred HHHHhc-----CCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeec
Confidence 999762 36899999999999999999999999999999999999998765421100 0011112 2478999999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
+|+++++ .|+++.++ .+..........+.+... ...
T Consensus 255 sK~~~~~--gg~v~~~~-~~~~~~~~~~~~~~~~~~-------------------~~~---------------------- 290 (409)
T 3kki_A 255 AKTFAYR--AGAIWCNN-EVNRCVPFISYPAIFSST-------------------LLP---------------------- 290 (409)
T ss_dssp SSTTCSS--CEEEEESS-SGGGTHHHHCHHHHHSBC-------------------CCH----------------------
T ss_pred chhhCCC--ceEEEECH-HHHHHHHHhCcCccccCC-------------------CcH----------------------
Confidence 9999876 36665544 333322211111111100 000
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 322 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 322 (448)
....++..+++..... +++.++
T Consensus 291 --------------------------------------------------------~~~aa~~aal~~~~~~--~~~~~~ 312 (409)
T 3kki_A 291 --------------------------------------------------------YEAAGLETTLEIIESA--DNRRQH 312 (409)
T ss_dssp --------------------------------------------------------HHHHHHHHHHHHHHHC--HHHHHH
T ss_pred --------------------------------------------------------HHHHHHHHHHHHHhcC--HHHHHH
Confidence 0011111222322221 567778
Q ss_pred HHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecC-Cc
Q psy14299 323 AVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQ-HR 401 (448)
Q Consensus 323 ~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~-g~ 401 (448)
..++++++.+.|+++ |+++. +....+.+.+.+. . ...++.+.|.++| +++.+.... ..
T Consensus 313 ~~~~~~~l~~~L~~~-g~~~~---~~~~~~~~~~~~~-~---------------~~~~~~~~L~~~G-v~v~~~~~~~~~ 371 (409)
T 3kki_A 313 LDRMARKLRIGLSQL-GLTIR---SESQIIGLETGDE-R---------------NTEKVRDYLESNG-VFGSVFCRPATS 371 (409)
T ss_dssp HHHHHHHHHHHHHTT-TCCCC---CSSSEEEEEEESH-H---------------HHHHHHHHHHHTT-EECEEECTTSSC
T ss_pred HHHHHHHHHHHHHHc-CCccC---CCCCEEEEEeCCH-H---------------HHHHHHHHHHHCC-ceEeeeCCCCcC
Confidence 888999999999998 87764 3455555544210 0 1236888999998 444443221 11
Q ss_pred ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 402 NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 402 ~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
...+++|+++ +..+|++|+++++++|+++.+..
T Consensus 372 ~~~~~iRi~~--~~~~t~e~i~~~~~~l~~~l~~~ 404 (409)
T 3kki_A 372 KNKNIIRLSL--NSDVNDEQIAKIIEVCSDAVNYG 404 (409)
T ss_dssp TTCEEEEEEC--CTTCCHHHHHHHHHHHHHHHHHS
T ss_pred CCCcEEEEEc--cCCCCHHHHHHHHHHHHHHHhcC
Confidence 1237999999 67899999999999999988653
No 69
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.88 E-value=2e-20 Score=186.62 Aligned_cols=273 Identities=10% Similarity=0.022 Sum_probs=191.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|||+++..++.+... +++.|+++...|.++...++..|. +++.+|.++++.+|+++|
T Consensus 86 ~v~~~~g~t~a~~~~~~~~~~--------------~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l 148 (363)
T 3ffh_A 86 ELIFTAGVDELIELLTRVLLD--------------TTTNTVMATPTFVQYRQNALIEGA---EVREIPLLQDGEHDLEGM 148 (363)
T ss_dssp GEEEESSHHHHHHHHHHHHCS--------------TTCEEEEEESSCHHHHHHHHHHTC---EEEEEECCTTSCCCHHHH
T ss_pred hEEEeCCHHHHHHHHHHHHcc--------------CCCEEEEcCCChHHHHHHHHHcCC---EEEEecCCCCCCcCHHHH
Confidence 579999999999888876533 566788899999999999999998 899999988899999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc--CCEEEEecccccccccccchh-hhhcCCCCccEEEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY--DLWMHVDACWGGSLIFSEKYS-FVLKGINRANSVSW 160 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~--g~~l~VD~A~~~~~~~~~~~~-~~~~~~~~aD~~~~ 160 (448)
++++++ ++++|++++++|++|.+.|++++.++++.+ |+++++|++|+.+.. ..... .........++++.
T Consensus 149 ~~~i~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~ 221 (363)
T 3ffh_A 149 LNAIDE------KTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITR 221 (363)
T ss_dssp HHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEE
T ss_pred HHhccc------CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEe
Confidence 999854 588999999999999999999999999988 999999999995443 10000 00001112347778
Q ss_pred CCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 161 NPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 161 s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
+++|+++.| ..+|+++++ +++..........| + ...+.
T Consensus 222 s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~-----------------~------~~~~~----------------- 260 (363)
T 3ffh_A 222 TFSKIYGLASARVGYGIAD-KEIIRQLNIVRPPF-----------------N------TTSIG----------------- 260 (363)
T ss_dssp ESSSTTCCSSCCCEEEEEC-HHHHHHHHHTCCSC-----------------C------CBHHH-----------------
T ss_pred echhhhcCchhceeeeecC-HHHHHHHHHhCCCC-----------------C------CCHHH-----------------
Confidence 899998633 334888874 34433322111100 0 00111
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 319 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 319 (448)
+..+..+++ ..++++++
T Consensus 261 -------------------------------------------------------------~~~~~~~l~--~~~~~~~~ 277 (363)
T 3ffh_A 261 -------------------------------------------------------------QKLAIEAIK--DQAFIGEC 277 (363)
T ss_dssp -------------------------------------------------------------HHHHHHHHH--CHHHHHHH
T ss_pred -------------------------------------------------------------HHHHHHHhc--CHHHHHHH
Confidence 111112222 11456777
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecC
Q psy14299 320 VDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQ 399 (448)
Q Consensus 320 ~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~ 399 (448)
.++..++++++.+.|++++|++++ ++..+.+.+.+ +. + ..++.+.|.++| +.+.++...
T Consensus 278 ~~~~~~~~~~l~~~l~~~~g~~~~--~~~~~~~~~~~-~~--~---------------~~~~~~~l~~~g-i~v~~g~~~ 336 (363)
T 3ffh_A 278 RTSNANGIKQYEAFAKRFEKVKLY--PANGNFVLIDL-GI--E---------------AGTIFSYLEKNG-YITRSGAAL 336 (363)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEC--CCCSSEEEEEC-SS--C---------------HHHHHHHHHHTT-EECEETTTT
T ss_pred HHHHHHHHHHHHHHHhhCCCceEC--CCCCeEEEEEC-CC--C---------------HHHHHHHHHHCC-eEEEeCccC
Confidence 888899999999999997799985 34444444433 11 1 237888999998 555554433
Q ss_pred CcccccEEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy14299 400 HRNLHNFFRLVTTCHPASSRQDMDYAIDQIELR 432 (448)
Q Consensus 400 g~~~~~~lRis~~~~~~~t~edid~l~~al~~~ 432 (448)
+. ++++|+++ + +++|+++++++|+++
T Consensus 337 ~~--~~~iRis~--~---~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 337 GF--PTAVRITI--G---KEEDNSAVIALLEKL 362 (363)
T ss_dssp TC--TTEEEEEC--C---CHHHHHHHHHHHHHH
T ss_pred CC--CCeEEEEC--C---CHHHHHHHHHHHHHh
Confidence 32 47999998 3 899999999999875
No 70
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.88 E-value=3.1e-21 Score=192.69 Aligned_cols=274 Identities=11% Similarity=0.051 Sum_probs=188.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|||+++..++.+... +++.|+++...|.++...++..|. +++.+|.++++.+|+++|
T Consensus 87 ~i~~~~g~t~a~~~~~~~~~~--------------~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l 149 (367)
T 3euc_A 87 EVLLGNGSDEIISMLALAAAR--------------PGAKVMAPVPGFVMYAMSAQFAGL---EFVGVPLRADFTLDRGAM 149 (367)
T ss_dssp EEEEEEHHHHHHHHHHHHTCC--------------TTCEEEEEESCSCCSCHHHHTTTC---EEEEEECCTTSCCCHHHH
T ss_pred eEEEcCCHHHHHHHHHHHHcC--------------CCCEEEEcCCCHHHHHHHHHHcCC---eEEEecCCCCCCCCHHHH
Confidence 678999999999888776532 567788899999999999998888 799999998999999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCcccccc---CHHHHHHHHHHc--CCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFD---PLDEIATVCEKY--DLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~---~l~~I~~ia~~~--g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
++++++. ++++|++++++|++|.+. ++++|+++|++| |+++++|++|+..... .....+.. ...+++
T Consensus 150 ~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~-~~~~i~ 221 (367)
T 3euc_A 150 LAAMAEH-----QPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQE--SWMSRLTD-FGNLLV 221 (367)
T ss_dssp HHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSC--CSGGGGGT-CTTEEE
T ss_pred HHHhhcc-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhccc--chHHHHhh-CCCEEE
Confidence 9999762 477999999999999884 578888889999 9999999998864321 11111111 134578
Q ss_pred EECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 159 SWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 159 ~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
+.+++|++.....+|+++.+ +++..........| + ...+.
T Consensus 222 ~~s~sK~~~~G~r~G~~~~~-~~~~~~~~~~~~~~-----------------~------~~~~~---------------- 261 (367)
T 3euc_A 222 MRTVSKLGLAGIRLGYVAGD-PQWLEQLDKVRPPY-----------------N------VNVLT---------------- 261 (367)
T ss_dssp EEECCCTTSCSCCEEEEEEC-HHHHHHHGGGCCSS-----------------C------CCHHH----------------
T ss_pred EecchhhcccccCceeeeeC-HHHHHHHHHhCCCC-----------------C------CCHHH----------------
Confidence 88999993333456777764 34433322111100 0 00111
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
+..+..+++. .+++++
T Consensus 262 --------------------------------------------------------------~~a~~~~l~~--~~~~~~ 277 (367)
T 3euc_A 262 --------------------------------------------------------------EATALFALEH--VAVLDE 277 (367)
T ss_dssp --------------------------------------------------------------HHHHHHHHTT--HHHHHH
T ss_pred --------------------------------------------------------------HHHHHHHhcC--HHHHHH
Confidence 1111112222 234667
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeec
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPL 398 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~ 398 (448)
+.++..++++++.+.|+++||+++. ++....+.+.+ + + ..++.+.|.++| +.+.+...
T Consensus 278 ~~~~~~~~~~~l~~~l~~~~g~~~~--~~~~~~~~~~~-~---~---------------~~~l~~~l~~~g-i~v~~~~~ 335 (367)
T 3euc_A 278 QAAQLRAERSRVAEGMAAHGGVTVF--PSAANFLLARV-P---D---------------AAQTFDRLLARK-VLIKNVSK 335 (367)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTCEEC--CCSSSEEEEEC-S---C---------------HHHHHHHHHTTT-EECEECGG
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEEC--CCCCeEEEEEC-C---C---------------HHHHHHHHHHCC-eEEEECCc
Confidence 7888889999999999999999964 44444444433 1 1 136788898888 55554433
Q ss_pred CCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHH
Q psy14299 399 QHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRG 433 (448)
Q Consensus 399 ~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~ 433 (448)
.+...++++|+++ + +++|+++++++|+++.
T Consensus 336 ~~~~~~~~iRis~--~---~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 336 MHPLLANCLRVTV--S---TPEENAQFLEAFAASL 365 (367)
T ss_dssp GCGGGTTEEEEEC--C---CHHHHHHHHHHHHHHT
T ss_pred cCCCCCCEEEEec--C---CHHHHHHHHHHHHHHh
Confidence 2222347999998 3 8999999999999865
No 71
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.88 E-value=7.4e-22 Score=198.00 Aligned_cols=149 Identities=16% Similarity=0.152 Sum_probs=117.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC-CCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN-ERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~-~~g~id~e~ 82 (448)
.+++|+|||+|+..++.++.. .+++.|+++..+|.++..+++..|. +++.++.+ +++.+|+++
T Consensus 53 ~~i~~~sgt~al~~~l~~l~~-------------~~gd~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~d~~~ 116 (373)
T 3frk_A 53 YCIGCGNGLDALHLILKGYDI-------------GFGDEVIVPSNTFIATALAVSYTGA---KPIFVEPDIRTYNIDPSL 116 (373)
T ss_dssp EEEEESCHHHHHHHHHHHTTC-------------CTTCEEEEETTSCTHHHHHHHHHSC---EEEEECEETTTTEECGGG
T ss_pred eEEEeCCHHHHHHHHHHHcCC-------------CCcCEEEECCCCcHHHHHHHHHcCC---EEEEEeccccccCcCHHH
Confidence 579999999999988876522 2667899999999999999999998 78889887 568999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC-
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN- 161 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s- 161 (448)
|++++++ ++++|+ +++++|...|+++|.++|++||+++|+|++|+.+...... . . + ...|++++|
T Consensus 117 l~~~l~~------~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~-~--~-~-~~~d~~~~S~ 182 (373)
T 3frk_A 117 IESAITE------KTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGM-K--V-G-SLGDAAGFSF 182 (373)
T ss_dssp TGGGCCT------TEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE-E--T-T-SSSSEEEEEC
T ss_pred HHHhcCC------CCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCE-e--c-c-ccccEEEEeC
Confidence 9998854 467776 4568999999999999999999999999999987652111 1 1 1 125788877
Q ss_pred -CccccCCCCceEEEEEeccch
Q psy14299 162 -PHKMLGAPLQCSILLIKEKGL 182 (448)
Q Consensus 162 -~hK~l~~P~g~G~l~vr~~~~ 182 (448)
.||+++++...|+++.+++.+
T Consensus 183 ~~~K~l~~~g~gg~~~~~~~~~ 204 (373)
T 3frk_A 183 YPAKNLGSLGDGGAVVTNDKDL 204 (373)
T ss_dssp CTTSSSCCSSSCEEEEESCHHH
T ss_pred cCCCccCccceeEEEEeCCHHH
Confidence 679998745566666655443
No 72
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.87 E-value=5.2e-21 Score=195.31 Aligned_cols=288 Identities=11% Similarity=0.089 Sum_probs=194.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC-CC--CCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN-ER--GQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~-~~--g~id~ 80 (448)
..+||+|||+||..++.+++. +++.|++....|+++...++..|. +++.+|.+ .+ +.+|+
T Consensus 121 ~v~~~~g~~ea~~~a~~~~~~--------------~gd~Vi~~~~~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~ 183 (421)
T 3l8a_A 121 DILFIDGVVPAISIALQAFSE--------------KGDAVLINSPVYYPFARTIRLNDH---RLVENSLQIINGRFEIDF 183 (421)
T ss_dssp GEEEESCHHHHHHHHHHHHSC--------------TEEEEEEEESCCHHHHHHHHHTTE---EEEEEECEEETTEEECCH
T ss_pred HEEEcCCHHHHHHHHHHHhcC--------------CCCEEEECCCCcHHHHHHHHHCCC---EEEeccccccCCCeeeCH
Confidence 479999999999999887643 567788999999999999998888 78888875 33 37899
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHcCCEEEEecccccccccccchhhh--h-cCCCC
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFV--L-KGINR 154 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~--~-~~~~~ 154 (448)
++|++++++ .++++|++++++|++|.+ .++++|.++|++||+++++|++|+............ + .....
T Consensus 184 ~~le~~i~~-----~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 258 (421)
T 3l8a_A 184 EQLEKDIID-----NNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKD 258 (421)
T ss_dssp HHHHHHHHH-----TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGG
T ss_pred HHHHHHhhc-----cCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcC
Confidence 999999974 258899999999999988 789999999999999999999998654321100000 0 01113
Q ss_pred ccEEEECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChH
Q psy14299 155 ANSVSWNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 233 (448)
Q Consensus 155 aD~~~~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 233 (448)
.+..+.+++|+++.| ..+|+++++++++..........+.
T Consensus 259 ~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~~--------------------------------------- 299 (421)
T 3l8a_A 259 FTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANN--------------------------------------- 299 (421)
T ss_dssp TEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTT---------------------------------------
T ss_pred cEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhcc---------------------------------------
Confidence 458889999999743 4568887764444332211000000
Q ss_pred HHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcC
Q psy14299 234 GFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 313 (448)
Q Consensus 234 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (448)
..+++.+.+.++..+++. ..
T Consensus 300 -----------------------------------------------------------~~~~n~~~~~a~~aal~~-~~ 319 (421)
T 3l8a_A 300 -----------------------------------------------------------QHEVPTVGMIATQAAFQY-GK 319 (421)
T ss_dssp -----------------------------------------------------------CSCCCHHHHHHHHHHHHH-CH
T ss_pred -----------------------------------------------------------cCCCCHHHHHHHHHHHhc-cH
Confidence 000111112222223332 33
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEE-EEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcE
Q psy14299 314 LGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNIC-FWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTL 391 (448)
Q Consensus 314 ~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~ 391 (448)
++++++.++..++++++.+.|+++|+++++ .+..+.+. +.+...+.+ ..++.+.|.++ | +
T Consensus 320 ~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~--~~~~~~~~~v~~~~~~~~---------------~~~l~~~l~~~~g-i 381 (421)
T 3l8a_A 320 PWLEELKTVIEGNIKLVIKELEAKTKIKVM--EPEGTYLVWLDFSAYAIA---------------QPQLSEKLQNEAK-V 381 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCEEE--CCSBSSEEEEECGGGTCC---------------TTHHHHHHHHTTC-E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEe--CCCeeEEEEEeccccCCC---------------HHHHHHHHHHhCC-E
Confidence 456778888899999999999988899986 34444444 333221222 12678888755 7 5
Q ss_pred EEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 392 MIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 392 ~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
.+.++...+...++++|+++. +++++++++++.|+++.+
T Consensus 382 ~v~~g~~f~~~~~~~iRi~~~----~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 382 VLNDGAHFGKEGKYFARLNVA----TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp ECEEGGGGCGGGTTEEEEECC----SCHHHHHHHHHHHHHHC-
T ss_pred EEECchhhCCCCCCEEEEEec----CCHHHHHHHHHHHHHHHh
Confidence 565544333323489999993 589999999999988753
No 73
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.87 E-value=6.2e-21 Score=191.68 Aligned_cols=284 Identities=12% Similarity=0.081 Sum_probs=190.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC--CC--CCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN--ER--GQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~--~~--g~id 79 (448)
..++|+|||+++..++.++.. +++.|+++...|.++...++..|. +++.+|.+ .+ +.+|
T Consensus 92 ~v~~~~g~~~a~~~~~~~~~~--------------~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~d 154 (391)
T 4dq6_A 92 WLIYSPGVIPAISLLINELTK--------------ANDKIMIQEPVYSPFNSVVKNNNR---ELIISPLQKLENGNYIMD 154 (391)
T ss_dssp GEEEESCHHHHHHHHHHHHSC--------------TTCEEEECSSCCTHHHHHHHHTTC---EEEECCCEECTTSCEECC
T ss_pred HeEEcCChHHHHHHHHHHhCC--------------CCCEEEEcCCCCHHHHHHHHHcCC---eEEeeeeeecCCCceEee
Confidence 478999999999888877643 567799999999999999999998 78888876 33 3589
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCC---
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGIN--- 153 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~--- 153 (448)
+++|++++++ +++|++++++|++|.+ .++++|.++|++||+++++|++|+.......... .+..+.
T Consensus 155 ~~~l~~~l~~-------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~-~~~~~~~~~ 226 (391)
T 4dq6_A 155 YEDIENKIKD-------VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHI-PMASISKEF 226 (391)
T ss_dssp HHHHHHHCTT-------EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCC-CGGGSCHHH
T ss_pred HHHHHHHhhc-------CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCcc-CHHHcCccc
Confidence 9999999853 7899999999999999 7799999999999999999999987543211000 011110
Q ss_pred -CccEEEECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhC
Q psy14299 154 -RANSVSWNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARG 231 (448)
Q Consensus 154 -~aD~~~~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 231 (448)
...+++.++||+++.| ..+|+++.+++.+..........+..
T Consensus 227 ~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~------------------------------------ 270 (391)
T 4dq6_A 227 EKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDI------------------------------------ 270 (391)
T ss_dssp HHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTC------------------------------------
T ss_pred cCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHHHhhcC------------------------------------
Confidence 1237788999999744 45777776653433322110000000
Q ss_pred hHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHh
Q psy14299 232 NLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKAR 311 (448)
Q Consensus 232 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (448)
.+.+.+.+..+..+++.
T Consensus 271 --------------------------------------------------------------~~~~~~~~~a~~~~l~~- 287 (391)
T 4dq6_A 271 --------------------------------------------------------------KRNNCFSLVATEASYNN- 287 (391)
T ss_dssp --------------------------------------------------------------CCCCHHHHHHHHHHHHH-
T ss_pred --------------------------------------------------------------CCCCHHHHHHHHHHHhc-
Confidence 00000111112222222
Q ss_pred cCccHHHHHHHHHHHHHHHHHHhhc-CCCeEEeccCCceeeEE-EEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-
Q psy14299 312 GNLGFRHFVDNAVDCSRYFLSQISQ-RPGFRLVIPEFQCTNIC-FWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG- 388 (448)
Q Consensus 312 ~~~G~~~~~~~~~~l~~~~~~~L~~-~pg~~l~~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~- 388 (448)
..+.++++.++..++++++.+.|++ +|+++++ ++..+.+. +.+...+.+ ..++.+.|.++
T Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~~ 350 (391)
T 4dq6_A 288 GESWLESFLEYLESNIDFAIKYINENMPKLKVR--KPEGTYLLWVDFSALGLS---------------DEELESILVQKG 350 (391)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEC--CCSBSSEEEEECGGGCCC---------------HHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEec--CCCccEEEEEEhhhcCCC---------------HHHHHHHHHHhC
Confidence 2234667788888999999999998 7999986 44445554 333211221 23788899988
Q ss_pred CcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHH
Q psy14299 389 GTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRG 433 (448)
Q Consensus 389 g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~ 433 (448)
| +.+.++...+...++++|+++ + ++++|++++++.|+++.
T Consensus 351 g-i~v~~g~~~~~~~~~~iRis~--~--~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 351 K-VALNQGNSFGIGGSGYQRINL--A--CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp C-EECEEGGGGCTTCTTEEEEEC--C--SCHHHHHHHHHHHHHHH
T ss_pred C-EEeeCchhhCCCCCCeEEEEE--c--CCHHHHHHHHHHHHHHh
Confidence 8 555554333322247999999 3 58999999999998764
No 74
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.87 E-value=3.9e-21 Score=195.35 Aligned_cols=284 Identities=14% Similarity=0.047 Sum_probs=192.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
.+++|+|||+++..++.++.. +++.|+++..+|.++...++..|. +++.+|.++ +..+ ++
T Consensus 104 ~v~~~~g~t~a~~~~~~~~~~--------------~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~-~~ 165 (409)
T 2gb3_A 104 NVLVTNGGSEAILFSFAVIAN--------------PGDEILVLEPFYANYNAFAKIAGV---KLIPVTRRMEEGFAI-PQ 165 (409)
T ss_dssp GEEEESHHHHHHHHHHHHHCC--------------TTCEEEEEESCCTHHHHHHHHHTC---EEEEEECCGGGTSCC-CT
T ss_pred HEEEeCCHHHHHHHHHHHhCC--------------CCCEEEEcCCCchhHHHHHHHcCC---EEEEeccCCCCCCcc-HH
Confidence 579999999999998877632 567789999999999999999998 788999875 3344 88
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCcccccc---CHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFD---PLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~---~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
+|++++++ ++++|++++++|++|.+. ++++|.++|++||+++++|++|+.+......... +.++...|++
T Consensus 166 ~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~-~~~~~~~~i~ 238 (409)
T 2gb3_A 166 NLESFINE------RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA-LSIESDKVVV 238 (409)
T ss_dssp TGGGGCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCG-GGSCCTTEEE
T ss_pred HHHHhhCc------CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCc-cccCCCCEEE
Confidence 88888753 478999999999999885 5899999999999999999999976542111111 2333357899
Q ss_pred EECCccccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 159 SWNPHKMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 159 ~~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
+.++||+++.|. .+|+++++++++..........+. .
T Consensus 239 ~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~~-~----------------------------------------- 276 (409)
T 2gb3_A 239 IDSVSKKFSACGARVGCLITRNEELISHAMKLAQGRL-A----------------------------------------- 276 (409)
T ss_dssp EEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHSC-C-----------------------------------------
T ss_pred EecchhccCCccceEEEEEECcHHHHHHHHHHHhccC-C-----------------------------------------
Confidence 999999996432 378888765233332211000000 0
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
.+.+.+..+..+++. +..+++
T Consensus 277 ----------------------------------------------------------~~~~~~~a~~~~l~~-~~~~~~ 297 (409)
T 2gb3_A 277 ----------------------------------------------------------PPLLEQIGSVGLLNL-DDSFFD 297 (409)
T ss_dssp ----------------------------------------------------------CCHHHHHHHHHHHTC-CHHHHH
T ss_pred ----------------------------------------------------------CCHHHHHHHHHHHhc-cHHHHH
Confidence 000001111112221 234567
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEE-eccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC------Cc
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRL-VIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG------GT 390 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l-~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~------g~ 390 (448)
++.++..++++++.+.|+++ |+++ . .+..+.+.+...+ +.+ ..++.+.|.++ |
T Consensus 298 ~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~-~~~---------------~~~l~~~l~~~~~~~~~g- 357 (409)
T 2gb3_A 298 FVRETYRERVETVLKKLEEH-GLKRFT--KPSGAFYITAELP-VED---------------AEEFARWMLTDFNMDGET- 357 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCCCBC--CCSBSSEEEEECS-SSC---------------HHHHHHHHHHSCCBTTEE-
T ss_pred HHHHHHHHHHHHHHHHHHHc-Cceeee--CCCeeEEEEEEeC-CCC---------------HHHHHHHHHhccccccCc-
Confidence 77888889999999999998 8887 4 3444555442212 111 23688888877 7
Q ss_pred EEEEeeecCCc---ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 391 LMIGYQPLQHR---NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 391 ~~~~~~~~~g~---~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
+.+.++...+. ..++++|+++ + ++++|++++++.|+++.+++.
T Consensus 358 i~v~~g~~f~~~~~~~~~~iRis~--~--~~~e~i~~~~~~l~~~l~~~~ 403 (409)
T 2gb3_A 358 TMVAPLRGFYLTPGLGKKEIRIAC--V--LEKDLLSRAIDVLMEGLKMFC 403 (409)
T ss_dssp EECEEGGGGCSSTTTTSSEEEEEC--C--SCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCchHhCCCCCCCCCEEEEEe--C--CCHHHHHHHHHHHHHHHHHhh
Confidence 55554422211 1137999999 4 799999999999999987653
No 75
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.87 E-value=9.8e-21 Score=189.69 Aligned_cols=285 Identities=10% Similarity=0.052 Sum_probs=187.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC---CCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER---GQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~---g~id~ 80 (448)
..++|+|||+++..++.++.. +++.|+++..+|.++...++..|. +++.+|.+++ +.+|+
T Consensus 84 ~v~~~~g~~~a~~~~~~~l~~--------------~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~ 146 (383)
T 3kax_A 84 WIVFSAGIVPALSTSIQAFTK--------------ENESVLVQPPIYPPFFEMVTTNNR---QLCVSPLQKQNDTYAIDF 146 (383)
T ss_dssp GEEEESCHHHHHHHHHHHHCC--------------TTCEEEECSSCCHHHHHHHHHTTC---EEEECCCEEETTEEECCH
T ss_pred hEEEcCCHHHHHHHHHHHhCC--------------CCCEEEEcCCCcHHHHHHHHHcCC---EEEeccceecCCcEEEcH
Confidence 479999999999888877633 567899999999999999999998 7888887643 35999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCC----C
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGI----N 153 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~----~ 153 (448)
++|++++.+ ++++|++++++|++|.+.| +++|.++|++||+++++|++|+........... +..+ .
T Consensus 147 ~~l~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~ 219 (383)
T 3kax_A 147 EHLEKQFQQ------GVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTP-FASLSEELA 219 (383)
T ss_dssp HHHHHHHTT------TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCC-GGGSCHHHH
T ss_pred HHHHHHhCc------CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCcee-HhhcCcccc
Confidence 999999932 5789999999999999877 566666799999999999999875432110000 0011 1
Q ss_pred CccEEEECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhCh
Q psy14299 154 RANSVSWNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 232 (448)
Q Consensus 154 ~aD~~~~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 232 (448)
..++++.++||+++.| ..+|+++..++.+..........+.. . ....
T Consensus 220 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~------------~--------~~~~------------ 267 (383)
T 3kax_A 220 ARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQGF------------H--------GLNI------------ 267 (383)
T ss_dssp TTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTC------------C--------CCCH------------
T ss_pred CcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhhccc------------C--------CCCH------------
Confidence 2358889999999744 35677766444433322110000000 0 0000
Q ss_pred HHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhc
Q psy14299 233 LGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARG 312 (448)
Q Consensus 233 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (448)
+.+.++..+++. .
T Consensus 268 ------------------------------------------------------------------~~~~a~~~~l~~-~ 280 (383)
T 3kax_A 268 ------------------------------------------------------------------FAYTAMQSAYTE-C 280 (383)
T ss_dssp ------------------------------------------------------------------HHHHHHHHHTTT-C
T ss_pred ------------------------------------------------------------------HHHHHHHHHHHh-h
Confidence 001111111111 1
Q ss_pred CccHHHHHHHHHHHHHHHHHHhhc-CCCeEEeccCCceeeEE-EEeeccCCCccccchhhhhhhhhhhHHHHHHHH-hCC
Q psy14299 313 NLGFRHFVDNAVDCSRYFLSQISQ-RPGFRLVIPEFQCTNIC-FWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV-LGG 389 (448)
Q Consensus 313 ~~G~~~~~~~~~~l~~~~~~~L~~-~pg~~l~~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g 389 (448)
.+.++++.++..++++++.+.|++ +|+++++ ++..+.+. +.+...+.+ ..++.+.|. ++|
T Consensus 281 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~~g 343 (383)
T 3kax_A 281 NDWLNEIRFYIEDNAKFACEYIKDHIPTLSVM--KPEGSFLLWIDCSALNLS---------------QDERTKLLEEKGK 343 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEC--CCSBSSEEEEECGGGCCC---------------HHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEe--cCCceEEEEEEccccCCC---------------HHHHHHHHHhhCC
Confidence 234667788888999999999998 8999986 44455554 333211121 237888898 568
Q ss_pred cEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHH
Q psy14299 390 TLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRG 433 (448)
Q Consensus 390 ~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~ 433 (448)
+.+.++...+...++++|++++ ++++|++++++.|+++.
T Consensus 344 -i~v~~g~~~~~~~~~~iRi~~~----~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 344 -IIVEPGEKYGLGGEEHIGINIG----CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp -EECEESGGGCTTCTTEEEEECS----SCHHHHHHHHHHHHHHH
T ss_pred -EEeECchhhcCCCCCeEEEEEc----CCHHHHHHHHHHHHHHh
Confidence 5555543322222479999993 48999999999998764
No 76
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.87 E-value=2e-20 Score=188.34 Aligned_cols=149 Identities=11% Similarity=0.125 Sum_probs=116.1
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-CCcCHHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-GQMICSFL 83 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-g~id~e~L 83 (448)
.+++++||+++.+++.++.. .+++.|+++..+|.++..+++..|. +++.++++++ +.+|+++|
T Consensus 56 ~i~~~sGt~al~~~l~~l~~-------------~~gd~Vi~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~d~~~l 119 (388)
T 1b9h_A 56 ALAVTNGTHALELALQVMGV-------------GPGTEVIVPAFTFISSSQAAQRLGA---VTVPVDVDAATYNLDPEAV 119 (388)
T ss_dssp EEEESCHHHHHHHHHHHTTC-------------CTTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTTTCCBCHHHH
T ss_pred EEEeCCHHHHHHHHHHHcCC-------------CCcCEEEECCCccHHHHHHHHHcCC---EEEEEecCCCcCCCCHHHH
Confidence 46677779999888876521 1567899999999999999999998 7889998864 78999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++++++ ++++|+ +++++|.+.|+++|.++|++||+++|+|++|+.+...... . +..+..+++.+++.|
T Consensus 120 ~~~i~~------~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~-~--~~~~~~i~~~S~s~~ 187 (388)
T 1b9h_A 120 AAAVTP------RTKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGK-R--VGELDSIATFSFQNG 187 (388)
T ss_dssp HHHCCT------TEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTE-E--GGGSSSCEEEECCTT
T ss_pred HHhcCc------CceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCe-e--cccccceEEEEccCC
Confidence 999853 466666 7888999999999999999999999999999976543111 1 112223678888899
Q ss_pred cccCCCCceEEEEEeccch
Q psy14299 164 KMLGAPLQCSILLIKEKGL 182 (448)
Q Consensus 164 K~l~~P~g~G~l~vr~~~~ 182 (448)
|+++++. .|+++.+++.+
T Consensus 188 K~l~g~~-~G~~~~~~~~~ 205 (388)
T 1b9h_A 188 KLMTAGE-GGAVVFPDGET 205 (388)
T ss_dssp SSSCSSS-CEEEEECTTCH
T ss_pred CcccCCC-eEEEEECCHHH
Confidence 9998764 57777766544
No 77
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.87 E-value=1.5e-20 Score=190.39 Aligned_cols=292 Identities=15% Similarity=0.136 Sum_probs=188.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.+++|+|||+++..++.+++. +++.|+++..+|.++...++..|. +++.+|.++++ +|+++|
T Consensus 100 ~v~~t~g~t~a~~~~~~~~~~--------------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~-~d~~~l 161 (407)
T 2zc0_A 100 NIVITIGGTGALDLLGRVLID--------------PGDVVITENPSYINTLLAFEQLGA---KIEGVPVDNDG-MRVDLL 161 (407)
T ss_dssp GEEEESHHHHHHHHHHHHHCC--------------TTCEEEEEESCCHHHHHHHHTTTC---EEEEEEEETTE-ECHHHH
T ss_pred eEEEecCHHHHHHHHHHHhcC--------------CCCEEEEeCCChHHHHHHHHHcCC---EEEEcccCCCC-CCHHHH
Confidence 578999999999998877643 556788899999999999988888 78889887765 999999
Q ss_pred HHHHHHhhhcCCCcEEE-EEeccCCccccccCHH---HHHHHHHHcCCEEEEecccccccccccchhhhhcCC--CCccE
Q psy14299 84 EQTIQTSLAEKKIPLFV-NATAGTTVLGAFDPLD---EIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGI--NRANS 157 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lV-v~~~~~t~tG~~~~l~---~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~--~~aD~ 157 (448)
++++++....+.++++| ++.+++|++|.+.|++ +|.++|++||+++|+|++|+.+........ .+..+ ...++
T Consensus 162 ~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i 240 (407)
T 2zc0_A 162 EEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIV-PLKALDNEGRVI 240 (407)
T ss_dssp HHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCC-CGGGGCSSCCEE
T ss_pred HHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCC-ChhhcCCCCCEE
Confidence 99997322122357776 5678899999999887 999999999999999999987654211100 01111 12346
Q ss_pred EEECCccccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHH
Q psy14299 158 VSWNPHKMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 236 (448)
Q Consensus 158 ~~~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~ 236 (448)
++.+++|+++ |. .+|+++++ +++..........+. + ....+..++
T Consensus 241 ~~~s~sK~~~-~G~r~G~~~~~-~~~~~~~~~~~~~~~---------------~------~~~~~~~~~----------- 286 (407)
T 2zc0_A 241 VAGTLSKVLG-TGFRIGWIIAE-GEILKKVLMQKQPID---------------F------CAPAISQYI----------- 286 (407)
T ss_dssp EEEESTTTTC-TTSCCEEEECC-HHHHHHHHHHHTTTT---------------S------SSCHHHHHH-----------
T ss_pred EEcccccccC-CCcceEEEecC-HHHHHHHHHHHHhhc---------------C------CCCHHHHHH-----------
Confidence 7788999998 53 47888875 343332211000000 0 000111110
Q ss_pred HHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHh-cC-c
Q psy14299 237 HFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKAR-GN-L 314 (448)
Q Consensus 237 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~ 314 (448)
+..+++.. -. .
T Consensus 287 -------------------------------------------------------------------~~~~l~~~~~~~~ 299 (407)
T 2zc0_A 287 -------------------------------------------------------------------ALEYLKRGYFEKY 299 (407)
T ss_dssp -------------------------------------------------------------------HHHHHHTTHHHHH
T ss_pred -------------------------------------------------------------------HHHHHHcCCchHH
Confidence 01111110 01 2
Q ss_pred cHHHHHHHHHHHHHHHHHHhhc-CCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEE
Q psy14299 315 GFRHFVDNAVDCSRYFLSQISQ-RPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLM 392 (448)
Q Consensus 315 G~~~~~~~~~~l~~~~~~~L~~-~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~ 392 (448)
+++++.++..++++++.+.|++ .|+++++ .+.....+.+.+ |.+.+ ..++.+.|.++ | +.
T Consensus 300 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~-~~~~~---------------~~~l~~~l~~~~g-i~ 361 (407)
T 2zc0_A 300 HLEGALLGYKEKRDIMLKALENHLPNAEFT-KPIAGMFVMFFL-PEGAD---------------GISFANELMEREG-VV 361 (407)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHCTTSCBC-CCSBSSEEEEEC-STTCC---------------HHHHHHHHHHHTC-EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCEEe-cCCCcEEEEEEc-CCCCC---------------HHHHHHHHHHhCC-eE
Confidence 3455677788889999999987 5788765 333333333433 22221 23688889888 8 55
Q ss_pred EEeeecCCc--ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 393 IGYQPLQHR--NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 393 ~~~~~~~g~--~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
+.++...+. ..++++|+++. .. +++|+++++++|+++.+++
T Consensus 362 v~~g~~~~~~~~~~~~iRis~~--~~-~~~~i~~~~~~l~~~l~~~ 404 (407)
T 2zc0_A 362 VVPGKPFYTDESGKNAIRLNFS--RP-SKEEIPIGIKKLAKLYKEK 404 (407)
T ss_dssp CBCSGGGCSSSCCTTEEEEECS--SS-CTTHHHHHHHHHHHHHHHH
T ss_pred EECchhccCCCCCCCeEEEEeC--CC-CHHHHHHHHHHHHHHHHHH
Confidence 554322211 12379999994 34 8999999999999988764
No 78
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.87 E-value=1.1e-20 Score=190.85 Aligned_cols=291 Identities=11% Similarity=0.019 Sum_probs=192.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC-CCC--CcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN-ERG--QMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~-~~g--~id~ 80 (448)
..++|+|||+++..++.+... +++.|+++..+|.++...++..|. +++.+|.+ +++ .+|+
T Consensus 91 ~v~~t~g~~~a~~~~~~~l~~--------------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~g~~~~d~ 153 (399)
T 1c7n_A 91 WIINTAGVVPAVFNAVREFTK--------------PGDGVIIITPVYYPFFMAIKNQER---KIIECELLEKDGYYTIDF 153 (399)
T ss_dssp GEEEESSHHHHHHHHHHHHCC--------------TTCEEEECSSCCTHHHHHHHTTTC---EEEECCCEEETTEEECCH
T ss_pred hEEEcCCHHHHHHHHHHHhcC--------------CCCEEEEcCCCcHhHHHHHHHcCC---EEEecccccCCCCEEEcH
Confidence 478999999999888876533 567789999999999999988887 78888875 333 5999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCC----C
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGI----N 153 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~----~ 153 (448)
++|++++++ .++++|++++++|++|.+.| +++|.++|++||+++++|++|+.......... .+..+ .
T Consensus 154 ~~l~~~l~~-----~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~-~~~~~~~~~~ 227 (399)
T 1c7n_A 154 QKLEKLSKD-----KNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHT-VFQSIDEQLA 227 (399)
T ss_dssp HHHHHHHTC-----TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCC-CGGGSCHHHH
T ss_pred HHHHHHhcc-----CCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcc-cHHHcCcccc
Confidence 999999963 25788999999999999988 99999999999999999999987543211000 01111 1
Q ss_pred CccEEEECCccccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhCh
Q psy14299 154 RANSVSWNPHKMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 232 (448)
Q Consensus 154 ~aD~~~~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 232 (448)
..++++.+++|+++.|. .+|+++++++++..........+-. . +
T Consensus 228 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~------------~------~----------------- 272 (399)
T 1c7n_A 228 DKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSG------------M------P----------------- 272 (399)
T ss_dssp TTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTC------------C------C-----------------
T ss_pred CcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHHhhccc------------C------C-----------------
Confidence 24578889999997553 3788887654443332110000000 0 0
Q ss_pred HHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhc
Q psy14299 233 LGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARG 312 (448)
Q Consensus 233 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (448)
.+.+.+..+..+++. +
T Consensus 273 ---------------------------------------------------------------~~~~~~~a~~~~l~~-~ 288 (399)
T 1c7n_A 273 ---------------------------------------------------------------FTTLGYKACEICYKE-C 288 (399)
T ss_dssp ---------------------------------------------------------------CCHHHHHHHHHHHHH-C
T ss_pred ---------------------------------------------------------------CCHHHHHHHHHHHhC-C
Confidence 000111111122222 1
Q ss_pred CccHHHHHHHHHHHHHHHHHHhhc-CCCeEEeccCCceeeEE-EEeeccCCCccccchhhhhhhhhhhHHHHHHHH-hCC
Q psy14299 313 NLGFRHFVDNAVDCSRYFLSQISQ-RPGFRLVIPEFQCTNIC-FWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV-LGG 389 (448)
Q Consensus 313 ~~G~~~~~~~~~~l~~~~~~~L~~-~pg~~l~~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g 389 (448)
.++++++.++..++++++.+.|++ +|+++++ ++..+.+. +.+...+.+ ..++.+.|. ++|
T Consensus 289 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~~g 351 (399)
T 1c7n_A 289 GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAP--LIEGTYLQWIDFRALKMD---------------HKAMEEFMIHKAQ 351 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCC--CCSBSSEEEEECGGGCCC---------------HHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEe--cCCceEEEEEEcccCCCC---------------HHHHHHHHHHhCC
Confidence 345667788888999999999998 8998875 44555554 333111111 236888887 678
Q ss_pred cEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHH
Q psy14299 390 TLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDL 438 (448)
Q Consensus 390 ~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~ 438 (448)
+ .+.++...+...++++|+++. . ++++++++++.|+++.+++..
T Consensus 352 i-~v~~g~~~~~~~~~~iRis~~--~--~~~~l~~~l~~l~~~l~~~~~ 395 (399)
T 1c7n_A 352 I-FFDEGYIFGDGGIGFERINLA--A--PSSVIQESLERLNKALKDLKN 395 (399)
T ss_dssp C-CCEEGGGGCGGGTTEEEEECC--S--CHHHHHHHHHHHHHHHHHHC-
T ss_pred E-EEeCccccCCCCCCeEEEEec--c--CHHHHHHHHHHHHHHHHHHHh
Confidence 4 444433222112479999995 2 378999999999998876543
No 79
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.87 E-value=1.3e-20 Score=188.45 Aligned_cols=284 Identities=13% Similarity=0.082 Sum_probs=189.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|||+++..++.+... +++.|+++...|.++...++..|. +++.+|.+++ +|+++|
T Consensus 83 ~i~~t~g~~~a~~~~~~~~~~--------------~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~--~d~~~l 143 (377)
T 3fdb_A 83 WIFPIPDVVRGLYIAIDHFTP--------------AQSKVIVPTPAYPPFFHLLSATQR---EGIFIDATGG--INLHDV 143 (377)
T ss_dssp GEEEESCHHHHHHHHHHHHSC--------------TTCCEEEEESCCTHHHHHHHHHTC---CEEEEECTTS--CCHHHH
T ss_pred HEEEeCChHHHHHHHHHHhcC--------------CCCEEEEcCCCcHhHHHHHHHcCC---EEEEccCCCC--CCHHHH
Confidence 578999999999888876543 456688899999999999999998 7899998876 999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCC--CCccEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGI--NRANSV 158 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~--~~aD~~ 158 (448)
++++++ +++++++++++|++|.+.| +++|.++|++||+++++|++|+......+.....+..+ ...+.+
T Consensus 144 ~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~ 217 (377)
T 3fdb_A 144 EKGFQA------GARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCIT 217 (377)
T ss_dssp HHHHHT------TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEE
T ss_pred HHHhcc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEE
Confidence 999976 3679999999999999875 67777789999999999999987443220000001111 123478
Q ss_pred EECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 159 SWNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 159 ~~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
+.+++|+++.| ..+|++++.++.+....... ..+...
T Consensus 218 ~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~-~~~~~~----------------------------------------- 255 (377)
T 3fdb_A 218 ITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQL-SPVIKD----------------------------------------- 255 (377)
T ss_dssp EECSTTTTTCGGGCCEEEECCSHHHHHHHHHS-CHHHHC-----------------------------------------
T ss_pred EEeChHhccCcchhheEEEeCCHHHHHHHHHH-HHhhcC-----------------------------------------
Confidence 88999999644 34676666555443332110 000000
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
+.+.+.+..+..+++. ..+.++
T Consensus 256 ---------------------------------------------------------~~~~~~~~a~~~~l~~-~~~~~~ 277 (377)
T 3fdb_A 256 ---------------------------------------------------------GASTLGLIAAEAAYRY-GTDFLN 277 (377)
T ss_dssp ---------------------------------------------------------CCCHHHHHHHHHHHHH-CHHHHH
T ss_pred ---------------------------------------------------------CCCHHHHHHHHHHHhc-cHHHHH
Confidence 0000111111122221 124467
Q ss_pred HHHHHHHHHHHHHHHHhhc-CCCeEEeccCCceeeEE-EEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEEE
Q psy14299 318 HFVDNAVDCSRYFLSQISQ-RPGFRLVIPEFQCTNIC-FWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMIG 394 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~-~pg~~l~~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~~ 394 (448)
++.++..++++++.+.|++ +|+++++ ++..+.+. +.+...+.. .++.+.|.++ | +.+.
T Consensus 278 ~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----------------~~~~~~l~~~~g-i~v~ 338 (377)
T 3fdb_A 278 QEVAYLKNNHDFLLHEIPKRIPGAKIT--PMQATYLMWIDFRDTTIE----------------GSPSEFFIEKAK-VAMN 338 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCEEC--CCSBCSEEEEECTTSCCC----------------SCHHHHHHHHHC-EECE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceEe--cCCeeEEEEEECcccCCC----------------HHHHHHHHHhCC-EEec
Confidence 7788899999999999998 8999986 34445444 333211111 1466677766 7 5555
Q ss_pred eeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 395 YQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 395 ~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
++...+...++++|++++ +++++++++++.|+++.++
T Consensus 339 ~g~~~~~~~~~~~Ris~~----~~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 339 DGAWFGEDGTGFCRLNFA----TSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp EGGGGCGGGTTEEEEECC----SCHHHHHHHHHHHHHHHTT
T ss_pred CChhccCCCCCEEEEEeC----CCHHHHHHHHHHHHHHHhh
Confidence 543333223489999994 3899999999999988754
No 80
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.87 E-value=5.4e-21 Score=192.09 Aligned_cols=282 Identities=11% Similarity=0.002 Sum_probs=188.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC---CCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN---ERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~---~~g~id~ 80 (448)
.+++|+|||+++..++.++.. +++.|+++..+|.++...++..|. +++.+|.+ +++.+|+
T Consensus 80 ~v~~~~g~~~a~~~~~~~~~~--------------~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~ 142 (381)
T 1v2d_A 80 SVVVTSGATEALYVLLQSLVG--------------PGDEVVVLEPFFDVYLPDAFLAGA---KARLVRLDLTPEGFRLDL 142 (381)
T ss_dssp GEEEESSHHHHHHHHHHHHCC--------------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEEETTEEECCH
T ss_pred hEEEcCChHHHHHHHHHHhCC--------------CCCEEEEcCCCchhHHHHHHHcCC---EEEEEeCCCCCccCCcCH
Confidence 489999999999998877633 566788899999999999999888 78899986 5678999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
++|++++++ ++++|++++++|++|.+.| +++|.++|++||+++|+|++|+.+.. .........-....|+
T Consensus 143 ~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~~ 215 (381)
T 1v2d_A 143 SALEKALTP------RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERTF 215 (381)
T ss_dssp HHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTEE
T ss_pred HHHHHhcCc------CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCEE
Confidence 999998853 4789999999999999876 89999999999999999999987643 1100000000124789
Q ss_pred EEECCccccCCCCc--eEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHH
Q psy14299 158 VSWNPHKMLGAPLQ--CSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 235 (448)
Q Consensus 158 ~~~s~hK~l~~P~g--~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ 235 (448)
++.++||+++.| | +|++++++ ++....... ..+. .+
T Consensus 216 ~~~s~sK~~~~~-G~r~G~~~~~~-~~~~~~~~~-~~~~--------------~~------------------------- 253 (381)
T 1v2d_A 216 TVGSAGKRLEAT-GYRVGWIVGPK-EFMPRLAGM-RQWT--------------SF------------------------- 253 (381)
T ss_dssp EEEEHHHHTTCG-GGCCEEEECCT-TTHHHHHHH-HHHH--------------TS-------------------------
T ss_pred EEeechhhcCCc-ccceEEEEeCH-HHHHHHHHH-Hhhc--------------cc-------------------------
Confidence 999999998644 5 78887754 333222100 0000 00
Q ss_pred HHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhc-Cc
Q psy14299 236 RHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARG-NL 314 (448)
Q Consensus 236 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 314 (448)
+.+.+.+..+..+++... .+
T Consensus 254 -----------------------------------------------------------~~~~~~~~a~~~~l~~~~~~~ 274 (381)
T 1v2d_A 254 -----------------------------------------------------------SAPTPLQAGVAEALKLARREG 274 (381)
T ss_dssp -----------------------------------------------------------SCCHHHHHHHHHHHHHHHHTT
T ss_pred -----------------------------------------------------------CCCcHHHHHHHHHHhCcccHH
Confidence 000111112222333221 45
Q ss_pred cHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEE-EEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEE
Q psy14299 315 GFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNIC-FWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMI 393 (448)
Q Consensus 315 G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~ 393 (448)
+++++.++..++++++.+.|++. |++++ . +..+.+. +.+ +. . ++.+.|.++| +.+
T Consensus 275 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~-~~~~~~~~~~~-~~----~---------------~~~~~l~~~g-i~v 330 (381)
T 1v2d_A 275 FYEALREGYRRRRDLLAGGLRAM-GLRVY-V-PEGTYFLMAEL-PG----W---------------DAFRLVEEAR-VAL 330 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-TCCEE-C-CSBSSEEEEEC-TT----C---------------CHHHHHHHTC-EEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCEec-C-CCcceEEEEec-Ch----H---------------hHHHHHHhCC-EEE
Confidence 67888899999999999999995 89886 4 3333333 322 10 0 1445667788 445
Q ss_pred EeeecCCc--ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHH
Q psy14299 394 GYQPLQHR--NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDL 438 (448)
Q Consensus 394 ~~~~~~g~--~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~ 438 (448)
.++...+. ..++++|+++. . +++|++++++.|+++.++...
T Consensus 331 ~~g~~~~~~~~~~~~iRi~~~--~--~~~~i~~~~~~l~~~l~~~r~ 373 (381)
T 1v2d_A 331 IPASAFYLEDPPKDLFRFAFC--K--TEEELHLALERLGRVVNSPRE 373 (381)
T ss_dssp EEGGGGCSSSCCTTEEEEECC--S--CHHHHHHHHHHHHHHC-----
T ss_pred ecchHhCCCCCCCCEEEEEeC--C--CHHHHHHHHHHHHHHHhhccc
Confidence 44322211 12379999994 3 899999999999998776543
No 81
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.87 E-value=2e-20 Score=191.71 Aligned_cols=302 Identities=15% Similarity=0.137 Sum_probs=193.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH-HhCCCCCcEEEEecCCC--CCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH-WLGIGMDNVIRVKTNER--GQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~-~~g~~~~~v~~v~~~~~--g~id~ 80 (448)
.+++|+|||++|..++.+++. +++.|+++...|.++...+. ..|. +++.++.+++ ..+|+
T Consensus 113 ~v~~~~gg~~a~~~~~~~l~~--------------~gd~vl~~~p~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~ 175 (435)
T 3piu_A 113 HLVLTAGATSANETFIFCLAD--------------PGEAVLIPTPYYPGFDRDLKWRTGV---EIVPIHCTSSNGFQITE 175 (435)
T ss_dssp GEEEEEHHHHHHHHHHHHHCC--------------TTCEEEEEESCCTTHHHHTTTTTCC---EEEEEECCGGGTSCCCH
T ss_pred HEEEcCChHHHHHHHHHHhcC--------------CCCeEEECCCccccHHHHHHHhcCC---EEEEeeCCCccCCcCCH
Confidence 579999999999998877644 56778999999999998877 6677 7889998763 46899
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccch---hhhhcC--C
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKY---SFVLKG--I 152 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~---~~~~~~--~ 152 (448)
++|++++++....+.++++|++++++|++|.+.| +++|.++|++||+++++|++|+.+.+..... ...... +
T Consensus 176 ~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~ 255 (435)
T 3piu_A 176 TALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNC 255 (435)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC---
T ss_pred HHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhcccccc
Confidence 9999999875555567899999999999998865 5888899999999999999998754321110 000010 0
Q ss_pred ------CCccEEEECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHH
Q psy14299 153 ------NRANSVSWNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWL 225 (448)
Q Consensus 153 ------~~aD~~~~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (448)
....+++.++||+++.| ..+|+++.+++.+...... ...+... ..+...+
T Consensus 256 d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~-~~~~~~~----------------------~~~~~~~ 312 (435)
T 3piu_A 256 DENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK-MSSFGLV----------------------SSQTQHL 312 (435)
T ss_dssp ----CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHH-HGGGSCC----------------------CHHHHHH
T ss_pred ccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHH-HhhcCCC----------------------CHHHHHH
Confidence 11237788999999744 3578887755443332211 1111000 0000000
Q ss_pred HHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHH
Q psy14299 226 MWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLW 305 (448)
Q Consensus 226 ~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (448)
+...+....+
T Consensus 313 ~~~~l~~~~~---------------------------------------------------------------------- 322 (435)
T 3piu_A 313 LSAMLSDKKL---------------------------------------------------------------------- 322 (435)
T ss_dssp HHHHHHCHHH----------------------------------------------------------------------
T ss_pred HHHHhcChHH----------------------------------------------------------------------
Confidence 0000000000
Q ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHH
Q psy14299 306 LMWKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKL 385 (448)
Q Consensus 306 ~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L 385 (448)
-.+.++++.++..++++++.+.|+++ |++++ ++..+.+.+...+...... . .....++.+.|
T Consensus 323 ------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~g~~~~~~l~~~~~~~----~-----~~~~~~~~~~l 384 (435)
T 3piu_A 323 ------TKNYIAENHKRLKQRQKKLVSGLQKS-GISCL--NGNAGLFCWVDMRHLLRSN----T-----FEAEMELWKKI 384 (435)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHHTT-TCEEC--CCCSSSEEEEECGGGSSSS----S-----HHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHhc-CCccc--CCCeeEEEEEEcccccccC----C-----chhHHHHHHHH
Confidence 01234556777888899999999998 89875 3444334332222211100 0 00123678888
Q ss_pred HhC-CcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 386 VLG-GTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 386 ~~~-g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
.++ | +.+.++...+...++++|+++. .. +++|++++++.|+++.+++.
T Consensus 385 ~~~~g-i~v~~g~~~~~~~~~~iRi~~~--~~-~~e~i~~~l~~l~~~l~~~~ 433 (435)
T 3piu_A 385 VYEVH-LNISPGSSCHCTEPGWFRVCFA--NL-PERTLDLAMQRLKAFVGEYY 433 (435)
T ss_dssp HHTSC-EECEEGGGGTCSSTTEEEEECS--SS-CHHHHHHHHHHHHHHHHHHC
T ss_pred HHHCC-EEEeCCcccCCCCCCEEEEEee--CC-CHHHHHHHHHHHHHHHHHHh
Confidence 877 7 5555543322222479999994 34 99999999999999887653
No 82
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.87 E-value=1.1e-20 Score=191.98 Aligned_cols=294 Identities=14% Similarity=0.054 Sum_probs=194.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC--CCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER--GQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~--g~id~e 81 (448)
.+++|+|||+++..++.++.. +++.|+++..+|.++...++..|. +++.++.+++ +.+|++
T Consensus 106 ~v~~~~g~~~al~~~~~~l~~--------------~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~ 168 (416)
T 1bw0_A 106 NVVLCSGGSHGILMAITAICD--------------AGDYALVPQPGFPHYETVCKAYGI---GMHFYNCRPENDWEADLD 168 (416)
T ss_dssp GEEEESHHHHHHHHHHHHHCC--------------TTCEEEEEESCCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHH
T ss_pred eEEEeCChHHHHHHHHHHhCC--------------CCCEEEEcCCCcHhHHHHHHHcCc---EEEEeecCcccCCCCCHH
Confidence 579999999999888877633 566788898999999999999888 7888887643 579999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEeccccccccccc----chhhhhcCCC-
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSE----KYSFVLKGIN- 153 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~----~~~~~~~~~~- 153 (448)
+|++++++ ++++|++++++|++|.+.| +++|.++|++||+++++|++|+....... ... .+..+.
T Consensus 169 ~l~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~~~~~~ 241 (416)
T 1bw0_A 169 EIRRLKDD------KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFT-SVADFET 241 (416)
T ss_dssp HHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCC-CTTSSCC
T ss_pred HHHHHhcc------CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCcc-CHHHccC
Confidence 99999854 4788999999999999998 99999999999999999999987433111 010 111111
Q ss_pred -CccEEEECCccccCCCC-ceEEEEEecc-chhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHh
Q psy14299 154 -RANSVSWNPHKMLGAPL-QCSILLIKEK-GLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKAR 230 (448)
Q Consensus 154 -~aD~~~~s~hK~l~~P~-g~G~l~vr~~-~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (448)
..++++.+++|+++.|. .+|+++++++ ............+. . ..
T Consensus 242 ~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~-~-------------------------------~~- 288 (416)
T 1bw0_A 242 TVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVG-M-------------------------------LV- 288 (416)
T ss_dssp SCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHH-H-------------------------------HH-
T ss_pred CCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHh-c-------------------------------cc-
Confidence 12466779999987663 4788887664 22221110000000 0 00
Q ss_pred ChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHH
Q psy14299 231 GNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKA 310 (448)
Q Consensus 231 g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (448)
.+.+.+.+.++..+++.
T Consensus 289 ---------------------------------------------------------------~~~~~~~~~a~~~~l~~ 305 (416)
T 1bw0_A 289 ---------------------------------------------------------------CGPCTVVQAALGEALLN 305 (416)
T ss_dssp ---------------------------------------------------------------TCSCHHHHHHHHHHHHS
T ss_pred ---------------------------------------------------------------cCCCcHHHHHHHHHHhc
Confidence 00111223333344554
Q ss_pred hcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHH-hCC
Q psy14299 311 RGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV-LGG 389 (448)
Q Consensus 311 ~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g 389 (448)
...++++++.++..++++++.+.|+++||++++ .+.....+.+.+......+. ....++.+.|. ++|
T Consensus 306 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~~g 373 (416)
T 1bw0_A 306 TPQEHLDQIVAKIEESAMYLYNHIGECIGLAPT-MPRGAMYLMSRIDLEKYRDI-----------KTDVEFFEKLLEEEN 373 (416)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEC-CCCBTTEEEEEECGGGBSSC-----------CSHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhCCCCccc-CCCeeEEEEEeCCHHHcCCC-----------CCHHHHHHHHHHHCC
Confidence 445677888889999999999999999999875 33223333333321111000 01236777775 778
Q ss_pred cEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 390 TLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 390 ~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
+.+.++...+. ++++|+++. +++++++++++.|+++.++.
T Consensus 374 -i~v~~g~~f~~--~~~iRis~~----~~~e~l~~~l~~l~~~l~~~ 413 (416)
T 1bw0_A 374 -VQVLPGTIFHA--PGFTRLTTT----RPVEVYREAVERIKAFCQRH 413 (416)
T ss_dssp -EECEEGGGGTC--TTEEEEECC----SCHHHHHHHHHHHHHHHHHH
T ss_pred -EEEecccccCC--CCeEEEEec----CCHHHHHHHHHHHHHHHHHh
Confidence 55554433221 379999993 57999999999999887654
No 83
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.87 E-value=5.3e-21 Score=192.97 Aligned_cols=150 Identities=12% Similarity=0.125 Sum_probs=116.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC-CCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN-ERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~-~~g~id~e~ 82 (448)
.+++|+|||+++..++.++.. .+++.|+++..+|.++..+++..|. +++.++.+ +++.+|+++
T Consensus 73 ~~i~~~~gt~al~~~l~~~~~-------------~~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~d~~~ 136 (391)
T 3dr4_A 73 HAIACNNGTTALHLALVAMGI-------------GPGDEVIVPSLTYIASANSVTYCGA---TPVLVDNDPRTFNLDAAK 136 (391)
T ss_dssp EEEEESSHHHHHHHHHHHHTC-------------CTTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTTTCSBCGGG
T ss_pred cEEEeCCHHHHHHHHHHHcCC-------------CCcCEEEECCCchHHHHHHHHHCCC---EEEEEecCccccCcCHHH
Confidence 578999999999988877622 1567899999999999999999998 78999988 567999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
|++++++ ++++|++ ++++|...|+++|.++|++||+++++|++|+.+....+... ..+..+++++++.
T Consensus 137 l~~~~~~------~~~~v~~---~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~---~~~~di~~~S~s~ 204 (391)
T 3dr4_A 137 LEALITP------RTKAIMP---VHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKS---GSLGDCATFSFFG 204 (391)
T ss_dssp SGGGCCT------TEEEECC---BCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEET---TSSSSEEEEECBT
T ss_pred HHHhcCC------CceEEEE---ECCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeee---cccCCEEEEECCC
Confidence 9998854 4666664 56899999999999999999999999999997765433211 1122245555668
Q ss_pred ccccCCCCceEEEEEeccch
Q psy14299 163 HKMLGAPLQCSILLIKEKGL 182 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~ 182 (448)
||++++ ...|+++.+++.+
T Consensus 205 ~K~l~~-g~gg~~~~~~~~~ 223 (391)
T 3dr4_A 205 NAIITT-GEGGMITTNDDDL 223 (391)
T ss_dssp TSSSCC-BSCEEEEESCHHH
T ss_pred CCcCCc-CCeEEEEECCHHH
Confidence 899976 3456666655433
No 84
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.87 E-value=1.5e-20 Score=192.20 Aligned_cols=304 Identities=14% Similarity=0.076 Sum_probs=196.6
Q ss_pred cEEEeCcHHHHHHHHHHHHH--HhcCCcccccCCCCCCCe--EEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCc
Q psy14299 4 KPFLLPGGSISNMYSICLAR--YRLDPDTKRKGLSHLPPL--CMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQM 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~--~~~~~~~~~~G~~~~~~~--~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~i 78 (448)
..++|+|||+++..++.++. . +++ .|+++..+|.++...++..|. +++.++.++ ++.+
T Consensus 107 ~i~~t~g~t~al~~~~~~l~~~~--------------~gd~~~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~ 169 (437)
T 3g0t_A 107 ACVPTVGSMQGCFVSFLVANRTH--------------KNREYGTLFIDPGFNLNKLQCRILGQ---KFESFDLFEYRGEK 169 (437)
T ss_dssp GEEEESHHHHHHHHHHHHHTTSC--------------TTCSCCEEEEESCCHHHHHHHHHHTC---CCEEEEGGGGCTTH
T ss_pred cEEEeCCHHHHHHHHHHHHhcCC--------------CCCccEEEEeCCCcHhHHHHHHHcCC---EEEEEeecCCCCcc
Confidence 57999999999998887765 3 455 688889999999999999998 788999864 4479
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchh--------h
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYS--------F 147 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~--------~ 147 (448)
|+++|++++++ .++++|++++++|++|.+.| +++|+++|++||+++++|++|+..... .... .
T Consensus 170 d~~~l~~~l~~-----~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~ 243 (437)
T 3g0t_A 170 LREKLESYLQT-----GQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFR-KDYSHPGEPLYQP 243 (437)
T ss_dssp HHHHHHHHHTT-----TCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTT-SCCCSTTSSCCCC
T ss_pred CHHHHHHHHhc-----CCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccC-CCcCcccccchhh
Confidence 99999999943 25789999999999999887 777899999999999999999864432 1100 1
Q ss_pred hhcCCCCccEEEECCccccCCC-CceEEEEEeccchhh-hhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHH
Q psy14299 148 VLKGINRANSVSWNPHKMLGAP-LQCSILLIKEKGLLH-QANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWL 225 (448)
Q Consensus 148 ~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~~~~~-~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (448)
.+.+....++++.++||+++.| ..+|++++++ .+.. ........+... .
T Consensus 244 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~--------------------~-------- 294 (437)
T 3g0t_A 244 SVANYTDNYILALSSSKAFSYAGQRIGVLMISG-KLYEREYPDLEESFGRL--------------------R-------- 294 (437)
T ss_dssp CGGGTCSCEEEEEESTTTTSCGGGCCEEEEECH-HHHHCBCGGGHHHHSCS--------------------B--------
T ss_pred ccCCCCCcEEEEEcCccCCCCccceeEEEEECH-HHhhhhhhccccccccc--------------------c--------
Confidence 1122224568899999998733 4578887754 3332 210000000000 0
Q ss_pred HHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHH
Q psy14299 226 MWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLW 305 (448)
Q Consensus 226 ~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (448)
.. ...+.+.... ...+.+.+.+..+.
T Consensus 295 -------~~-~~~~~~~~~~----------------------------------------------~~~~~~~~~~~a~~ 320 (437)
T 3g0t_A 295 -------FG-EALSSSALYA----------------------------------------------LSSGATHSAQWGMA 320 (437)
T ss_dssp -------HH-HHHHTTHHHH----------------------------------------------HHSSSCHHHHHHHH
T ss_pred -------hh-HHHHHHHHhh----------------------------------------------hcCCCCHHHHHHHH
Confidence 00 0000000000 00012222333334
Q ss_pred HHHHHhc--CccHHHHHHHHHHHHHHHHHHhhcCCCeEEec-----cCCceeeEEEEeeccCCCccccchhhhhhhhhhh
Q psy14299 306 LMWKARG--NLGFRHFVDNAVDCSRYFLSQISQRPGFRLVI-----PEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVA 378 (448)
Q Consensus 306 ~~~~~~~--~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~-----~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 378 (448)
.+++... ...++++.++..++++++.+.|+++ |++++. .++..+.+.+...+ +.+ .
T Consensus 321 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------------~ 383 (437)
T 3g0t_A 321 AMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN-GFNIVYDKDGNEPLADGFYFTVGYK-GMD---------------S 383 (437)
T ss_dssp HHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEEESSCEETTEECCSSSEEEEEET-TCC---------------H
T ss_pred HHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCEEeccccCCCCCceeEEEEEecC-CCC---------------H
Confidence 4444422 1227889999999999999999999 998740 02133333332212 222 2
Q ss_pred HHHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 379 PRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 379 ~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
.++.+.|.++| +.+.+....+...++++|+|+ + +.+++|+++++++|+++.+
T Consensus 384 ~~l~~~L~~~g-i~v~~~~~~~~~~~~~iRis~--~-~~~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 384 SKLIEKFVRYG-MCAITLKTTGSKRNEAMRICT--S-LLPESQFPDLEKRLQMLNA 435 (437)
T ss_dssp HHHHHHHHHTT-EECEESTTTTCCCTTCEEEEC--S-SSCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC-eEEeeccccCCCCCCEEEEEE--e-cCCHHHHHHHHHHHHHHHh
Confidence 37889999998 555555443332226899999 4 4499999999999998865
No 85
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.87 E-value=1.5e-20 Score=195.72 Aligned_cols=301 Identities=16% Similarity=0.114 Sum_probs=176.2
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHH------H--HHHHhCCCCCcEEEEecC-CCC
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSML------K--AAHWLGIGMDNVIRVKTN-ERG 76 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~------~--~~~~~g~~~~~v~~v~~~-~~g 76 (448)
+++++||+||+.++.+..+ |++.|++++.+|.+.. . .+.+.|... .+..++++ +++
T Consensus 124 v~~~sGt~An~~al~al~~--------------pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~-~~~~~~vd~~~~ 188 (490)
T 2a7v_A 124 VQPYSGSPANLAVYTALLQ--------------PHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFF-ESMPYKLNPKTG 188 (490)
T ss_dssp CCCSSHHHHHHHHHHHHCC--------------SCEECCC--------------------------------CCBCTTTC
T ss_pred EeCCchHHHHHHHHHHHcC--------------CCCEecccCccccccccchhhhcchhHHHcCCeE-EEEecccccccC
Confidence 5667999999999877643 7888999988875432 1 233445421 23344455 468
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCcc
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRAN 156 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD 156 (448)
.+|+++|++++.+. +|++|++..+. +|...|+++|.++|++||+++|+|+||+.+..........+ ..+|
T Consensus 189 ~iD~d~le~~l~~~-----~~klIi~~~s~--~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~---~~aD 258 (490)
T 2a7v_A 189 LIDYNQLALTARLF-----RPRLIIAGTSA--YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF---KHAD 258 (490)
T ss_dssp SBCHHHHHHHHHHH-----CCSEEEECCSS--CCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGG---GTCS
T ss_pred CcCHHHHHHHHhhc-----CCcEEEEcCCC--CCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCC---CCCC
Confidence 99999999999752 46777665444 46778999999999999999999999987654322211112 2479
Q ss_pred EEEECCccccCCCCceEEEEEeccchhhhhcc-CCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHH
Q psy14299 157 SVSWNPHKMLGAPLQCSILLIKEKGLLHQANA-TAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 235 (448)
Q Consensus 157 ~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ 235 (448)
++++++||+|++|.| |++++++. +...-.. ....++. +
T Consensus 259 iv~~S~hK~l~Gp~G-G~i~~~~~-~~~~~~~~~~~~~~~---------------------------------------l 297 (490)
T 2a7v_A 259 IVTTTTHKTLRGARS-GLIFYRKG-VKAVDPKTGREIPYT---------------------------------------F 297 (490)
T ss_dssp EEEEESSGGGCSCSC-EEEEEECS-EEEEETTTEEEEECC---------------------------------------C
T ss_pred EEEECCcccCccccc-hheeeccc-hhcccccccchhhHH---------------------------------------H
Confidence 999999999999987 88777664 1100000 0000000 0
Q ss_pred HHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCcccccc-chhhHHHHHHHHHhcCc
Q psy14299 236 RHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGR-KVDAFKLWLMWKARGNL 314 (448)
Q Consensus 236 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 314 (448)
...++..+- . -.+.++ ...+.++.++++....+
T Consensus 298 ~~~i~~~~~--------------------------------~--------------g~qggp~~~~iaAla~Al~~~~~~ 331 (490)
T 2a7v_A 298 EDRINFAVF--------------------------------P--------------SLQGGPHNHAIAAVAVALKQACTP 331 (490)
T ss_dssp HHHHHHHHT--------------------------------T--------------TTCCSCCHHHHHHHHHHHHHHHSH
T ss_pred HHHHHHHhc--------------------------------c--------------cCCCCchHHHHHHHHHHHHHHhhh
Confidence 000000000 0 000001 11122334455555555
Q ss_pred cHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEE
Q psy14299 315 GFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIG 394 (448)
Q Consensus 315 G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~ 394 (448)
.++++.++..++++++.+.|++. |++++......+++.+.+.+.+++ ..++.+.|.+.| +.+.
T Consensus 332 ~~~~~~~~~~~na~~L~~~L~~~-G~~v~~~~t~t~lv~vdl~~~g~~---------------~~~~~~~L~~~G-I~v~ 394 (490)
T 2a7v_A 332 MFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKGLD---------------GARAERVLELVS-ITAN 394 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTTTCC---------------HHHHHHHHHHTT-EECE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCCCeEEEEEeCCCCCC---------------HHHHHHHHHhCC-eEEe
Confidence 66888899999999999999997 999872123445565655443333 136777888888 5555
Q ss_pred eeecCC-c--ccccEEEEEecC--CCCCCHHHHHHHHHHHHHHHHH
Q psy14299 395 YQPLQH-R--NLHNFFRLVTTC--HPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 395 ~~~~~g-~--~~~~~lRis~~~--~~~~t~edid~l~~al~~~~~~ 435 (448)
.....+ . -.+..+|+++.+ +...+++|+++++++|.++.+.
T Consensus 395 ~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 395 KNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp EECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 432222 1 123689997621 3457899999999999988763
No 86
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.86 E-value=2.9e-20 Score=184.63 Aligned_cols=277 Identities=12% Similarity=0.047 Sum_probs=190.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|||+++..++.+... +++.|+++...|.++...++..|. +++.+|.++++.+|+++|
T Consensus 70 ~i~~~~g~~~a~~~~~~~l~~--------------~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~d~~~l 132 (354)
T 3ly1_A 70 SILLTAGSSEGIRAAIEAYAS--------------LEAQLVIPELTYGDGEHFAKIAGM---KVTKVKMLDNWAFDIEGL 132 (354)
T ss_dssp GEEEESHHHHHHHHHHHHHCC--------------TTCEEEEESSSCTHHHHHHHHTTC---EEEEECCCTTSCCCHHHH
T ss_pred HEEEeCChHHHHHHHHHHHhC--------------CCCeEEECCCCchHHHHHHHHcCC---EEEEecCCCCCCCCHHHH
Confidence 578999999999888876533 567788999999999999999998 899999988899999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHH--cCCEEEEeccccccccccc--chhhhhcCCCCccEEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEK--YDLWMHVDACWGGSLIFSE--KYSFVLKGINRANSVS 159 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~--~g~~l~VD~A~~~~~~~~~--~~~~~~~~~~~aD~~~ 159 (448)
++++++ +.++++|++++++|++|.+.|++++.++++. ||+++++|++|+....... ............++++
T Consensus 133 ~~~l~~----~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 208 (354)
T 3ly1_A 133 KAAVAA----YSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILL 208 (354)
T ss_dssp HHHHHT----CSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEE
T ss_pred HHHhcc----CCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEE
Confidence 999973 1258899999999999999999999888888 9999999999986543211 0011111111345888
Q ss_pred ECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 160 WNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 160 ~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
.|+||+++.| .++|+++.+ +.+..........+ . ......+++
T Consensus 209 ~s~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~~~--~---------------------~~~~~~~a~------------ 252 (354)
T 3ly1_A 209 KTFSKIHAMAGMRVGYAVAH-PTVIALMGRYVAGE--K---------------------INFSGVDAA------------ 252 (354)
T ss_dssp EESSSTTCCGGGCCEEEECC-HHHHHHHGGGTTCS--C---------------------CCHHHHHHH------------
T ss_pred eeChhhccChhhhheeeecC-HHHHHHHHHhcCCC--C---------------------CCHHHHHHH------------
Confidence 9999999733 457877763 34333322111100 0 001111111
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
..+++ ..+++++
T Consensus 253 ------------------------------------------------------------------~~~l~--~~~~~~~ 264 (354)
T 3ly1_A 253 ------------------------------------------------------------------LASMN--DSAFITY 264 (354)
T ss_dssp ------------------------------------------------------------------HHHTT--CHHHHHH
T ss_pred ------------------------------------------------------------------HHHhc--CHHHHHH
Confidence 11111 1134667
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeec
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPL 398 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~ 398 (448)
+.++..++++++.+.|+++ |++++ ++..+.+.+.+ +. + ..++.+.|.++| +.+. +..
T Consensus 265 ~~~~~~~~~~~l~~~l~~~-~~~~~--~~~~~~~~~~~-~~--~---------------~~~~~~~l~~~g-i~v~-g~~ 321 (354)
T 3ly1_A 265 SKKSNDVSRQILLKALEDL-KLPYL--PSEGNFVFHQL-VV--P---------------LKDYQTHMADAG-VLIG-RAF 321 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TCCBC--CCCSSEEEEEC-SS--C---------------HHHHHHHHHHTT-EECC-CCC
T ss_pred HHHHHHHHHHHHHHHHHHC-CCeEC--CCCceEEEEEC-CC--C---------------HHHHHHHHHHCC-EEEe-ecC
Confidence 7788888999999999988 88764 33444444432 11 1 237888899998 4444 333
Q ss_pred CCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 399 QHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 399 ~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
.+ .++++|+++ + +++|+++++++|+++.++
T Consensus 322 ~~--~~~~iRis~--~---~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 322 PP--ADNWCRISL--G---TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp TT--CTTEEEEEC--C---CHHHHHHHHHHHHHHHHT
T ss_pred CC--CCCEEEEEc--C---CHHHHHHHHHHHHHHHHh
Confidence 22 247999998 3 799999999999998764
No 87
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.86 E-value=7.7e-21 Score=189.64 Aligned_cols=278 Identities=14% Similarity=0.075 Sum_probs=183.3
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH--HHHHHHHhCCCCCcEEEEecCC---CC-Cc
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS--MLKAAHWLGIGMDNVIRVKTNE---RG-QM 78 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s--~~~~~~~~g~~~~~v~~v~~~~---~g-~i 78 (448)
.++|+|||+++..++.+... +++.|++....|++ +...++..| . ++.++.+. .+ .+
T Consensus 71 i~~t~g~t~a~~~~~~~l~~--------------~gd~vl~~~~~~~~~~~~~~~~~~g-~---~~~v~~~~~~~~~~~~ 132 (362)
T 2c0r_A 71 LFIQGGASTQFAMIPMNFLK--------------EGQTANYVMTGSWASKALKEAKLIG-D---THVAASSEASNYMTLP 132 (362)
T ss_dssp EEESSHHHHHHHHHHHHHCC--------------TTCEEEEEECSHHHHHHHHHHHHHS-C---EEEEEECGGGTTCSCC
T ss_pred EEECCCchHHHHHHHHhcCC--------------CCCeEEEEecCcHhHHHHHHHHHhC-C---eEEEecccccccccCC
Confidence 35779999999888776543 45666666566665 345666666 3 56677652 22 35
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCcccc-ccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccE
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA-FDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~-~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
|.++++ +. .++++|++++++|+||. +.|+++| ||++++||++|+.+..+.+ +. ..|+
T Consensus 133 ~~~~~~--i~------~~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~-----~~---~~d~ 190 (362)
T 2c0r_A 133 KLQEIQ--LQ------DNAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFD-----LN---QFGL 190 (362)
T ss_dssp CGGGCC--CC------TTEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCCC-----GG---GCSE
T ss_pred CHHHcc--cC------CCcCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccCCccc-----hh---HCcE
Confidence 666653 42 35899999999999999 4889887 8999999999998865432 11 2389
Q ss_pred EEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 158 VSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 158 ~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
++.++|||++ |.|+|+++++++ +........+.++... +...
T Consensus 191 ~~~s~~K~~g-~~G~G~l~~~~~-~~~~l~~~~~~~~~~~------------------------------------~~~~ 232 (362)
T 2c0r_A 191 VYAGAQKNLG-PSGVTVVIVRED-LVAESPKHLPTMLRYD------------------------------------TYVK 232 (362)
T ss_dssp EEEETTTTTC-CSSCEEEEEEGG-GSSSCCTTSCGGGCHH------------------------------------HHHH
T ss_pred EEEecccccc-CcCcEEEEEcHH-HHhhccccCchHHhHH------------------------------------HHhh
Confidence 9999999996 888999999764 3322211111111000 0000
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc-cH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL-GF 316 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~ 316 (448)
.+....+.+.+.+.++..+++....+ |+
T Consensus 233 ---------------------------------------------------~~~~~~t~~~~~~~a~~~al~~~~~~~~~ 261 (362)
T 2c0r_A 233 ---------------------------------------------------NNSLYNTPPSFGIYMVNEVLKWIEERGGL 261 (362)
T ss_dssp ---------------------------------------------------TTTCSSCCCHHHHHHHHHHHHHHHHTTHH
T ss_pred ---------------------------------------------------ccCcCCCchHHHHHHHHHHHHHHHHhCCH
Confidence 00000122334456666777776666 79
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCe-EEeccCC---ceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEE
Q psy14299 317 RHFVDNAVDCSRYFLSQISQRPGF-RLVIPEF---QCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLM 392 (448)
Q Consensus 317 ~~~~~~~~~l~~~~~~~L~~~pg~-~l~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~ 392 (448)
+++.++..++++++.+.|++++++ +++ .++ ..+++.|.+ |.+. ...++.+.|.++|+ .
T Consensus 262 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~---------------~~~~~~~~L~~~gi-~ 323 (362)
T 2c0r_A 262 EGVQQANRKKASLIYDAIDQSGGFYRGC-VDVDSRSDMNITFRL-ASEE---------------LEKEFVKASEQEGF-V 323 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTSSEES-SCGGGBCSSEEEEEC-SCHH---------------HHHHHHHHHHHTTE-E
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccC-CChHHcCCcEEEEEc-CCcc---------------hHHHHHHHHHHCCC-e
Confidence 999999999999999999999546 875 322 234555543 1111 12478888989994 4
Q ss_pred EEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 393 IGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 393 ~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
+.++... .+++|+|+ +.++++||+++++++|+++.++
T Consensus 324 ~~~g~~~----~~~iRis~--~~~~~~e~i~~l~~~l~~~~~~ 360 (362)
T 2c0r_A 324 GLKGHRS----VGGLRASI--YNAVPYESCEALVQFMEHFKRS 360 (362)
T ss_dssp SCBCCTT----TCSEEEEC--CTTSCHHHHHHHHHHHHHHHHH
T ss_pred eccCCCC----CCEEEEEC--CCCCCHHHHHHHHHHHHHHHHh
Confidence 3332211 25799999 5789999999999999998764
No 88
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.86 E-value=2.7e-20 Score=190.53 Aligned_cols=293 Identities=13% Similarity=0.040 Sum_probs=195.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|||+++.+++..+++ +++.|+++..+|..+...++..|. +++.++.++ ++.+|++
T Consensus 120 ~v~~t~g~t~al~~~~~~l~~--------------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~ 182 (427)
T 3dyd_A 120 DVILTSGCSQAIDLCLAVLAN--------------PGQNILVPRPGFSLYKTLAESMGI---EVKLYNLLPEKSWEIDLK 182 (427)
T ss_dssp GEEEESSHHHHHHHHHHHHCC--------------TTCEEEEEESCCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHH
T ss_pred HEEEecCcHHHHHHHHHHhcC--------------CCCEEEEcCCCchhHHHHHHHcCC---EEEEEecccccCCCCCHH
Confidence 579999999999988877643 566788899999999999999998 788888753 5689999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCC-Ccc-
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGIN-RAN- 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~-~aD- 156 (448)
+|++++++ ++++|++++++|++|.+.| +++|+++|++||+++++|++|+........... +..+. ..+
T Consensus 183 ~l~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~-~~~~~~~~~v 255 (427)
T 3dyd_A 183 QLEYLIDE------KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEP-LATLSTDVPI 255 (427)
T ss_dssp HHHSSCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCC-GGGGCSSCCE
T ss_pred HHHHHhcc------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCcc-HHHhCCCCcE
Confidence 99998854 4789999999999999999 999999999999999999999875432111100 01111 122
Q ss_pred EEEECCccccCCC-CceEEEEEeccchh-h-hhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChH
Q psy14299 157 SVSWNPHKMLGAP-LQCSILLIKEKGLL-H-QANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 233 (448)
Q Consensus 157 ~~~~s~hK~l~~P-~g~G~l~vr~~~~~-~-~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 233 (448)
+++.|++|.++.| ..+|+++++++... . ...
T Consensus 256 i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~---------------------------------------------- 289 (427)
T 3dyd_A 256 LSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIR---------------------------------------------- 289 (427)
T ss_dssp EEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHH----------------------------------------------
T ss_pred EEEeeccccCCCcCcceEEEEecCcchhhHHHHH----------------------------------------------
Confidence 5566999987654 24788887653110 0 000
Q ss_pred HHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcC
Q psy14299 234 GFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 313 (448)
Q Consensus 234 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (448)
..+..... ...+++.+.+..+..+++....
T Consensus 290 ---~~l~~~~~-----------------------------------------------~~~~~~~~~~~a~~~~L~~~~~ 319 (427)
T 3dyd_A 290 ---DGLVKLSQ-----------------------------------------------RILGPCTIVQGALKSILCRTPG 319 (427)
T ss_dssp ---HHHHHHHH-----------------------------------------------HHCCSCHHHHHHHHHHHHHSCH
T ss_pred ---HHHHHHHh-----------------------------------------------ccCCCCHHHHHHHHHHHHhcCH
Confidence 00000000 0001122223334444554445
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEE-EeeccCCCccccchhhhhhhhhhhHHHHHHHH-hCCcE
Q psy14299 314 LGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICF-WFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV-LGGTL 391 (448)
Q Consensus 314 ~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g~~ 391 (448)
++++++.++..++++++.+.|+++||++++ . +..+.+.+ .+......+. ....++.+.|. ++| +
T Consensus 320 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~-p~~g~~~~~~l~~~~~~~~-----------~~~~~~~~~l~~~~g-V 385 (427)
T 3dyd_A 320 EFYHNTLSFLKSNADLCYGALAAIPGLRPV-R-PSGAMYLMVGIEMEHFPEF-----------ENDVEFTERLVAEQS-V 385 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTEEEE-C-CSBTTEEEEEECGGGCTTC-----------SSHHHHHHHHHHHHC-E
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceec-C-CCeeEEEEEecCHhhcCCC-----------CCHHHHHHHHHHHCC-E
Confidence 677888889999999999999999999876 3 44444443 3321111100 01236777876 678 5
Q ss_pred EEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 392 MIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 392 ~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
.+.++...+. ++++|+++ . +++++++++++.|+++.+++
T Consensus 386 ~v~~g~~~~~--~~~iRis~--~--~~~e~i~~~l~~l~~~l~~~ 424 (427)
T 3dyd_A 386 HCLPATCFEY--PNFIRVVI--T--VPEVMMLEACSRIQEFCEQH 424 (427)
T ss_dssp ECEEGGGGTC--TTEEEEES--C--SCHHHHHHHHHHHHHHHHHH
T ss_pred EEECCcccCC--CCeEEEEE--C--CCHHHHHHHHHHHHHHHHHh
Confidence 5554432221 37999998 3 68999999999999988764
No 89
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.86 E-value=4.1e-20 Score=188.83 Aligned_cols=298 Identities=10% Similarity=0.094 Sum_probs=190.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH-HhCCCCCcEEEEecCC--CCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH-WLGIGMDNVIRVKTNE--RGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~-~~g~~~~~v~~v~~~~--~g~id~ 80 (448)
..++|+|+|+++..++.+++. +++.|+++..+|.++...+. ..|. +++.+|.++ ++.+|+
T Consensus 110 ~i~~~~G~~~ai~~~~~~~~~--------------~gd~Vl~~~p~y~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~ 172 (428)
T 1iay_A 110 RVVMAGGATGANETIIFCLAD--------------PGDAFLVPSPYYPAFNRDLRWRTGV---QLIPIHCESSNNFKITS 172 (428)
T ss_dssp SCEEEEHHHHHHHHHHHHHCC--------------TTCEEEEESSCCTTHHHHTTTTTCC---EEEEECCCTTTTTCCCH
T ss_pred hEEEccChHHHHHHHHHHhCC--------------CCCeEEEccCCCcchHHHHHHhcCC---EEEEeecCCccCCcCCH
Confidence 478999999999888877643 56678889999998877543 5676 788888864 347899
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEeccccccccccc---chhhhhcC---
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSE---KYSFVLKG--- 151 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~---~~~~~~~~--- 151 (448)
++|++++++....+.++++|++++++|++|.+.| +++|.++|++||+++++|++|+.+.+... ........
T Consensus 173 ~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~ 252 (428)
T 1iay_A 173 KAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEM 252 (428)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGG
T ss_pred HHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhcccccc
Confidence 9999999764334456889999999999999999 99999999999999999999987543211 11111110
Q ss_pred --CCCcc--EEEECCccccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHH
Q psy14299 152 --INRAN--SVSWNPHKMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLM 226 (448)
Q Consensus 152 --~~~aD--~~~~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (448)
+ ..| +++.++||+++.|. .+|++++.++.+....... ..+. . ...+...++
T Consensus 253 ~~~-~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~-~~~~-~---------------------~~~~~~~a~ 308 (428)
T 1iay_A 253 TYC-NKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKM-SSFG-L---------------------VSTQTQYFL 308 (428)
T ss_dssp TTS-CTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHH-HTTS-C---------------------CCHHHHHHH
T ss_pred ccC-CCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHH-Hhcc-c---------------------CCHHHHHHH
Confidence 0 146 78899999997543 3588877554443332110 0000 0 000111111
Q ss_pred HHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHH
Q psy14299 227 WKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWL 306 (448)
Q Consensus 227 ~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (448)
...+....+
T Consensus 309 ~~~l~~~~~----------------------------------------------------------------------- 317 (428)
T 1iay_A 309 AAMLSDEKF----------------------------------------------------------------------- 317 (428)
T ss_dssp HHHTTCHHH-----------------------------------------------------------------------
T ss_pred HHHhcChHH-----------------------------------------------------------------------
Confidence 111110000
Q ss_pred HHHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeE-EEEeeccCCCccccchhhhhhhhhhhHHHHHHH
Q psy14299 307 MWKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNI-CFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKL 385 (448)
Q Consensus 307 ~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L 385 (448)
..+.++++.++..++++++.+.|+++ |++++ ++..+.+ .+.+ +..... .. .....++.+.|
T Consensus 318 -----~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~g~~~~~~~-~~~~~~----~~-----~~~~~~l~~~l 379 (428)
T 1iay_A 318 -----VDNFLRESAMRLGKRHKHFTNGLEVV-GIKCL--KNNAGLFCWMDL-RPLLRE----ST-----FDSEMSLWRVI 379 (428)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBC--CCSSSSEEEEEC-GGGCSS----SS-----HHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHhc-CCccc--CCCeeEEEEEec-hhhcCC----Cc-----hhHHHHHHHHH
Confidence 01234567778888899999999998 88765 3433443 3443 211100 00 00123688888
Q ss_pred HhC-CcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 386 VLG-GTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 386 ~~~-g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
.++ | +.+.+....+...++++|+++ + .++++|+++++++|+++.++
T Consensus 380 ~~~~g-i~v~~~~~~~~~~~~~iRis~--~-~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 380 INDVK-LNVSPGSSFECQEPGWFRVCF--A-NMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp HHTSC-EECEEGGGGTCSSSSEEEEEC--S-SSCHHHHHHHHHHHHHHHHT
T ss_pred HHhCC-EEEeCchhhCCCCCCEEEEEE--e-cCCHHHHHHHHHHHHHHHhc
Confidence 876 8 555544322211136999999 4 57999999999999988754
No 90
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.86 E-value=2.4e-20 Score=188.99 Aligned_cols=150 Identities=11% Similarity=0.067 Sum_probs=116.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e~ 82 (448)
..+++++||+++..++.+++. .+++.|+++..+|.++...++..|. +++.++.++ ++.+|+++
T Consensus 80 ~~v~~~~Gt~a~~~~l~~~~~-------------~~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~d~~~ 143 (399)
T 2oga_A 80 HAVGVNSGMDALQLALRGLGI-------------GPGDEVIVPSHTYIASWLAVSATGA---TPVPVEPHEDHPTLDPLL 143 (399)
T ss_dssp EEEEESCHHHHHHHHHHHTTC-------------CTTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCSSSSSBCHHH
T ss_pred eEEEecCHHHHHHHHHHHhCC-------------CCcCEEEECCCccHHHHHHHHHCCC---EEEEEecCCCCCCcCHHH
Confidence 478999999999888776522 1567789999999999999999888 788999876 57899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
|++++++ ++++|++ ++++|.+.|+++|.++|+++|+++++|++|+.+... +... .. ...|++++|+
T Consensus 144 l~~~i~~------~~~~v~~---~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~~--~~--~~~di~~~S~ 209 (399)
T 2oga_A 144 VEKAITP------RTRALLP---VHLYGHPADMDALRELADRHGLHIVEDAAQAHGARY-RGRR--IG--AGSSVAAFSF 209 (399)
T ss_dssp HHHHCCT------TEEEECC---BCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEE-TTEE--TT--CTTCEEEEEC
T ss_pred HHHhcCC------CCeEEEE---eCCcCCccCHHHHHHHHHHcCCEEEEECcccccCcc-CCee--cc--cccCEEEEeC
Confidence 9999854 4666663 578999999999999999999999999999877542 1111 11 1258999998
Q ss_pred c--cccCCCCceEEEEEeccchh
Q psy14299 163 H--KMLGAPLQCSILLIKEKGLL 183 (448)
Q Consensus 163 h--K~l~~P~g~G~l~vr~~~~~ 183 (448)
| |+++.|...|+++.+++++.
T Consensus 210 ~~sK~~~~~G~~g~~~~~~~~~~ 232 (399)
T 2oga_A 210 YPGKNLGCFGDGGAVVTGDPELA 232 (399)
T ss_dssp CTTSSSCCSSCCEEEEESCHHHH
T ss_pred CCCccCCcCCceEEEEeCCHHHH
Confidence 5 99987555666666545443
No 91
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.86 E-value=2.2e-20 Score=187.98 Aligned_cols=285 Identities=12% Similarity=0.053 Sum_probs=190.2
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICSF 82 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e~ 82 (448)
+++|+|||+++..++.++.. +++.|+++..+|+++...++..|. +++.+|.++ ++.+|+++
T Consensus 90 v~~~~g~~~a~~~~~~~~~~--------------~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~ 152 (389)
T 1gd9_A 90 IMVLLGANQAFLMGLSAFLK--------------DGEEVLIPTPAFVSYAPAVILAGG---KPVEVPTYEEDEFRLNVDE 152 (389)
T ss_dssp EEEESSTTHHHHHHHTTTCC--------------TTCEEEEEESCCTTHHHHHHHHTC---EEEEEECCGGGTTCCCHHH
T ss_pred EEEcCChHHHHHHHHHHhCC--------------CCCEEEEcCCCchhHHHHHHHCCC---EEEEeccCCccCCCCCHHH
Confidence 89999999999888765422 567789999999999999999998 788999875 45789999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCcccccc---CHHHHHHHHHHcCCEEEEecccccccccccch-h-hhhcCCCCccE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFD---PLDEIATVCEKYDLWMHVDACWGGSLIFSEKY-S-FVLKGINRANS 157 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~---~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~-~-~~~~~~~~aD~ 157 (448)
|++++++ ++++|++++++|++|.+. ++++|.++|++||+++++|++|+.+....... . ..+.+....|+
T Consensus 153 l~~~l~~------~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (389)
T 1gd9_A 153 LKKYVTD------KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTI 226 (389)
T ss_dssp HHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEE
T ss_pred HHHhcCc------CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEE
Confidence 9999854 478889999999999887 49999999999999999999999876521100 0 01112234689
Q ss_pred EEECCccccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHH
Q psy14299 158 VSWNPHKMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 236 (448)
Q Consensus 158 ~~~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~ 236 (448)
++.++||+++.|. .+|++++++ .+..........+. + + .......
T Consensus 227 ~~~s~sK~~~~~G~r~G~~~~~~-~~~~~l~~~~~~~~---------------~----~--~~~~~~~------------ 272 (389)
T 1gd9_A 227 TVNGFSKTFAMTGWRLGFVAAPS-WIIERMVKFQMYNA---------------T----C--PVTFIQY------------ 272 (389)
T ss_dssp EEEESTTTTTCGGGCCEEEECCH-HHHHHHHHHHTTTT---------------C----S--CCHHHHH------------
T ss_pred EEecChhhcCCcccceEEEEECH-HHHHHHHHHHhhhc---------------c----C--CCHHHHH------------
Confidence 9999999986442 268887754 33332211000000 0 0 0000000
Q ss_pred HHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHh-cCcc
Q psy14299 237 HFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKAR-GNLG 315 (448)
Q Consensus 237 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G 315 (448)
.+..+++.. ...+
T Consensus 273 ------------------------------------------------------------------a~~~~l~~~~~~~~ 286 (389)
T 1gd9_A 273 ------------------------------------------------------------------AAAKALKDERSWKA 286 (389)
T ss_dssp ------------------------------------------------------------------HHHHHHTCHHHHHH
T ss_pred ------------------------------------------------------------------HHHHHHhCCCcchH
Confidence 111111110 0014
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeecc-CCCccccchhhhhhhhhhhHHHHHHHH-hCCcEEE
Q psy14299 316 FRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPV-SLRDKVEDETWWSTLSKVAPRIKEKLV-LGGTLMI 393 (448)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g~~~~ 393 (448)
++++.++..++++++.+.|+++ |++++ .+..+.+.+...+. +.+ ..++.+.|. ++| +.+
T Consensus 287 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~~g-i~v 347 (389)
T 1gd9_A 287 VEEMRKEYDRRRKLVWKRLNEM-GLPTV--KPKGAFYIFPRIRDTGLT---------------SKKFSELMLKEAR-VAV 347 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCCCC--CCCBTTEECCBCGGGTCC---------------HHHHHHHHHHHTC-EEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCeec--CCCeeeEEEEeccCCCCC---------------HHHHHHHHHHhCC-EEE
Confidence 6677888889999999999998 88775 34444433311121 111 236888888 788 555
Q ss_pred EeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 394 GYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 394 ~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
.++...+...++++|+++. +++++++++++.|+++.++
T Consensus 348 ~~g~~~~~~~~~~iRi~~~----~~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 348 VPGSAFGKAGEGYVRISYA----TAYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp EEGGGGCGGGTTBEEEECC----SCHHHHHHHHHHHHHHHHH
T ss_pred eCchhhCCCCCCeEEEEec----CCHHHHHHHHHHHHHHHHh
Confidence 5443322222478999994 2899999999999988764
No 92
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.86 E-value=6.8e-20 Score=184.65 Aligned_cols=287 Identities=10% Similarity=-0.008 Sum_probs=188.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCC---CcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERG---QMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g---~id~ 80 (448)
..++|+|||+++..++.+... +++.|+++...|.++...++..|. +++.+|.++++ .+|+
T Consensus 89 ~v~~t~g~~~al~~~~~~l~~--------------~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~ 151 (390)
T 1d2f_A 89 TVVYGPSVIYMVSELIRQWSE--------------TGEGVVIHTPAYDAFYKAIEGNQR---TVMPVALEKQADGWFCDM 151 (390)
T ss_dssp GEEEESCHHHHHHHHHHHSSC--------------TTCEEEEEESCCHHHHHHHHHTTC---EEEEEECEECSSSEECCH
T ss_pred HEEEcCCHHHHHHHHHHHhcC--------------CCCEEEEcCCCcHHHHHHHHHCCC---EEEEeecccCCCccccCH
Confidence 479999999999888776533 566788899999999999998888 78888876442 5899
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCC-C-c
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGIN-R-A 155 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~-~-a 155 (448)
++|++++++ .++++|++++++|++|.+.| +++|.++|++||+++++|++|+.+........ .+..+. . .
T Consensus 152 ~~l~~~l~~-----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~-~~~~~~~~~~ 225 (390)
T 1d2f_A 152 GKLEAVLAK-----PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHI-PWSNVARGDW 225 (390)
T ss_dssp HHHHHHHTS-----TTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCC-CGGGTCCSSE
T ss_pred HHHHHHhcc-----CCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCc-CHHHcchhhH
Confidence 999999864 25788888999999999877 89999999999999999999987543211110 011121 1 2
Q ss_pred cEEEECCccccCCCC-ceEEEEEeccchhhhhccCCc-ccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChH
Q psy14299 156 NSVSWNPHKMLGAPL-QCSILLIKEKGLLHQANATAA-TYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 233 (448)
Q Consensus 156 D~~~~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 233 (448)
|. +.+++|+++.|. .+|+++++++.+......... .+-. . + ...+
T Consensus 226 d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------------~------~--~~~~------------ 272 (390)
T 1d2f_A 226 AL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGL------------S------S--PSVL------------ 272 (390)
T ss_dssp EE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCC------------C------S--CCHH------------
T ss_pred hh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhhhccc------------C------C--CCHH------------
Confidence 66 899999997442 368888865444332211000 0000 0 0 0000
Q ss_pred HHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcC
Q psy14299 234 GFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 313 (448)
Q Consensus 234 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (448)
.+..+..+++. ..
T Consensus 273 ------------------------------------------------------------------~~~a~~~~l~~-~~ 285 (390)
T 1d2f_A 273 ------------------------------------------------------------------ALTAHIAAYQQ-GA 285 (390)
T ss_dssp ------------------------------------------------------------------HHHHHHHHHHH-CH
T ss_pred ------------------------------------------------------------------HHHHHHHHHhc-CH
Confidence 01111112221 12
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhc-CCCeEEeccCCceeeEE-EEeeccCCCccccchhhhhhhhhhhHHHHHHHH-hCCc
Q psy14299 314 LGFRHFVDNAVDCSRYFLSQISQ-RPGFRLVIPEFQCTNIC-FWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV-LGGT 390 (448)
Q Consensus 314 ~G~~~~~~~~~~l~~~~~~~L~~-~pg~~l~~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g~ 390 (448)
+.++++.++..++++++.+.|++ +|+++++ ++..+.+. +.+...+.+ ..++.+.|. ++|
T Consensus 286 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------------~~~l~~~l~~~~g- 347 (390)
T 1d2f_A 286 PWLDALRIYLKDNLTYIADKMNAAFPELNWQ--IPQSTYLAWLDLRPLNID---------------DNALQKALIEQEK- 347 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSSCCCC--CCSBCSEEEEECGGGCCC---------------HHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEe--cCCccEEEEEEccccCCC---------------HHHHHHHHHHHcC-
Confidence 34566778888899999999998 8898764 34555554 333111111 236888888 578
Q ss_pred EEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 391 LMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 391 ~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
+.+.++...+...++++|++++ . ++++++++++.|+++.++
T Consensus 348 i~v~~g~~f~~~~~~~~Ris~~--~--~~~~l~~~l~~l~~~l~~ 388 (390)
T 1d2f_A 348 VAIMPGYTYGEEGRGFVRLNAG--C--PRSKLEKGVAGLINAIRA 388 (390)
T ss_dssp EECEEGGGGCGGGTTEEEEECC--S--CHHHHHHHHHHHHHHHHH
T ss_pred EEeeCccccCCCCCCeEEEEec--C--CHHHHHHHHHHHHHHHHh
Confidence 5555543322112479999995 2 578999999999888765
No 93
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.86 E-value=3.6e-20 Score=188.76 Aligned_cols=150 Identities=13% Similarity=0.106 Sum_probs=115.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e~ 82 (448)
..+++++||+++..++.++.. .+++.|+++..+|.++..+++..|. +++.++.++ ++.+|+++
T Consensus 59 ~~i~~~~gt~al~~~~~~~~~-------------~~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~d~~~ 122 (418)
T 2c81_A 59 YCVPTTSGSTALMLALEALGI-------------GEGDEVIVPSLTWIATATAVLNVNA---LPVFVDVEADTYCIDPQL 122 (418)
T ss_dssp EEEEESCHHHHHHHHHHHTTC-------------CTTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTTTCSBCHHH
T ss_pred cEEEeCCHHHHHHHHHHHcCC-------------CCcCEEEECCCccHhHHHHHHHcCC---EEEEEecCCCCCCcCHHH
Confidence 468999999999888876522 1567899999999999999999898 788999886 78999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
|++++++ ++++|+++ +++|...|+++|.++|++||+++|+|++|+.+...... . ...+..+++.++++
T Consensus 123 l~~~i~~------~~~~v~~~---~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~-~--~~~~~~~~~~s~s~ 190 (418)
T 2c81_A 123 IKSAITD------KTKAIIPV---HLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQ-R--AGTIGDIGAFSCQQ 190 (418)
T ss_dssp HGGGCCT------TEEEECCB---CCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE-E--TTSSSSEEEEECCT
T ss_pred HHHhhCC------CCeEEEEe---CCcCCcccHHHHHHHHHHCCCEEEEECcccccCccCCE-e--cccccceEEEeccC
Confidence 9998854 46777764 47899999999999999999999999999988632111 1 11122255666667
Q ss_pred ccccCCCCceEEEEEeccch
Q psy14299 163 HKMLGAPLQCSILLIKEKGL 182 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~ 182 (448)
||++++ ...|+++.+++++
T Consensus 191 ~K~~~~-g~~g~~~~~~~~l 209 (418)
T 2c81_A 191 GKVLTA-GEGGIIVTKNPRL 209 (418)
T ss_dssp TSSSCS-SSCEEEEESCHHH
T ss_pred CcccCC-CCeEEEEECCHHH
Confidence 999987 4666666644443
No 94
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.86 E-value=8e-21 Score=192.07 Aligned_cols=284 Identities=14% Similarity=0.109 Sum_probs=187.9
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHH---HHHHHHhCCCCCcEEEEec--C-CCCCcC
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSM---LKAAHWLGIGMDNVIRVKT--N-ERGQMI 79 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~---~~~~~~~g~~~~~v~~v~~--~-~~g~id 79 (448)
+++++||+++..++.++.. +++.|+++..+|.++ ...++..|. .+..++. + .++.+|
T Consensus 89 i~~~sGt~a~~~~~~~~~~--------------~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d 151 (407)
T 2dkj_A 89 VQPHSGSQANMAVYMALME--------------PGDTLMGMDLAAGGHLTHGSRVNFSGK---LYKVVSYGVRPDTELID 151 (407)
T ss_dssp CCCSSHHHHHHHHHHHHCC--------------TTCEEEEECGGGTCCGGGTCTTSHHHH---HSEEEEECCCTTTSSCC
T ss_pred EEecchHHHHHHHHHHhcC--------------CCCEEEEecccccCccchHHHHHhcCc---eEEEEecCCCcccCccC
Confidence 5667788898888877632 566788899999877 344445554 2334443 4 367899
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+++|++++++. ++++|+++.+.+ |...|+++|.++|++||+++++|++|+.|....+.... .+...|+++
T Consensus 152 ~~~l~~~l~~~-----~~~~v~~~~p~~--~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~---~~~~~di~~ 221 (407)
T 2dkj_A 152 LEEVRRLALEH-----RPKVIVAGASAY--PRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPN---PLPYAHVVT 221 (407)
T ss_dssp HHHHHHHHHHH-----CCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCC---CTTTCSEEE
T ss_pred HHHHHHHHhhc-----CCeEEEEecccc--CCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCC---ccccccEEE
Confidence 99999999752 367777755555 48889999999999999999999999986653332111 112379999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 239 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i 239 (448)
.++||++++|.+ |+++++++++..........+.. .+..
T Consensus 222 ~s~sK~l~g~~~-G~~~~~~~~~~~~l~~~~~~~~~------------------~~~~---------------------- 260 (407)
T 2dkj_A 222 STTHKTLRGPRG-GLILSNDPELGKRIDKLIFPGIQ------------------GGPL---------------------- 260 (407)
T ss_dssp EESSGGGCCCSC-EEEEESCHHHHHHHHHHHTTTTC------------------SSCC----------------------
T ss_pred EeccccCCCCCc-eEEEECCHHHHHHHHhhhccccc------------------CCCc----------------------
Confidence 999999998886 88888644443332110000000 0000
Q ss_pred HHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHH
Q psy14299 240 DNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 319 (448)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 319 (448)
.....++..+++....++++++
T Consensus 261 ----------------------------------------------------------~~~~~a~~~al~~~~~~~~~~~ 282 (407)
T 2dkj_A 261 ----------------------------------------------------------EHVIAGKAVAFFEALQPEFKEY 282 (407)
T ss_dssp ----------------------------------------------------------HHHHHHHHHHHHHHHSHHHHHH
T ss_pred ----------------------------------------------------------HHHHHHHHHHHHHHHHhhHHHH
Confidence 0001122334455445678889
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEeccC-CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeec
Q psy14299 320 VDNAVDCSRYFLSQISQRPGFRLVIPE-FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPL 398 (448)
Q Consensus 320 ~~~~~~l~~~~~~~L~~~pg~~l~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~ 398 (448)
.++..++++++.+.|+++ |++++ .+ ...+.+.+.+...+.. ..++.+.|.++| +.+.+...
T Consensus 283 ~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~g-i~v~~~~~ 344 (407)
T 2dkj_A 283 SRLVVENAKRLAEELARR-GYRIV-TGGTDNHLFLVDLRPKGLT---------------GKEAEERLDAVG-ITVNKNAI 344 (407)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCEEG-GGSCSSSEEEEECGGGTCC---------------HHHHHHHHHHTT-EECEECCC
T ss_pred HHHHHHHHHHHHHHHHhC-Cceee-cCCCCceEEEEECcccCCC---------------HHHHHHHHHHcC-ceecCCcC
Confidence 999999999999999998 99986 43 3455555554221111 236788888888 44444321
Q ss_pred C----CcccccEEEEEecCCCC----CCHHHHHHHHHHHHHHHHH
Q psy14299 399 Q----HRNLHNFFRLVTTCHPA----SSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 399 ~----g~~~~~~lRis~~~~~~----~t~edid~l~~al~~~~~~ 435 (448)
. +...++++|+++. .+ ++++|+++++++|+++.++
T Consensus 345 ~~~~~~~~~~~~iRis~~--~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 345 PFDPKPPRVTSGIRIGTP--AITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp TTCSSCTTTCSEEEEECH--HHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred ccccccccCCCceeeecc--cccccCCCHHHHHHHHHHHHHHHhc
Confidence 1 1112368999993 33 7999999999999998876
No 95
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.86 E-value=4.8e-20 Score=183.34 Aligned_cols=275 Identities=10% Similarity=-0.016 Sum_probs=187.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|||+++..++..+ +.|+++..+|.++...++..|. +++.+|.++++.+++++|
T Consensus 80 ~i~~~~g~t~al~~~~~~~------------------d~vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~l 138 (361)
T 3ftb_A 80 GIVLGNGASEIIELSISLF------------------EKILIIVPSYAEYEINAKKHGV---SVVFSYLDENMCIDYEDI 138 (361)
T ss_dssp EEEEESSHHHHHHHHHTTC------------------SEEEEEESCCTHHHHHHHHTTC---EEEEEECCTTSCCCHHHH
T ss_pred eEEEcCCHHHHHHHHHHHc------------------CcEEEecCChHHHHHHHHHcCC---eEEEeecCcccCCCHHHH
Confidence 5789999999988887543 2478888999999999999998 899999988888999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchh-hhhcCCCCccEEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYS-FVLKGINRANSVS 159 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~-~~~~~~~~aD~~~ 159 (448)
++++++ +++|++++++|++|.+.| +++|+++|++||+++++|++|+..... .... ....+.....+++
T Consensus 139 ~~~l~~-------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~ 210 (361)
T 3ftb_A 139 ISKIDD-------VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFII 210 (361)
T ss_dssp HHHTTT-------CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEE
T ss_pred HHhccC-------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEE
Confidence 988853 678999999999999876 667888888999999999999865542 1100 0011111234667
Q ss_pred ECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 160 WNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 160 ~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
.+++|+++.| ...|++++.++++..........+ ....+...+.
T Consensus 211 ~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~------------ 255 (361)
T 3ftb_A 211 RAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPW-----------------------NINCFAEMAA------------ 255 (361)
T ss_dssp EESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTT-----------------------CSCHHHHHHH------------
T ss_pred eeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCCC-----------------------CCCHHHHHHH------------
Confidence 8999998744 456777655655444332111100 0000111111
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
..+++ ..+++++
T Consensus 256 ------------------------------------------------------------------~~~l~--~~~~~~~ 267 (361)
T 3ftb_A 256 ------------------------------------------------------------------INCLK--DTNYIEE 267 (361)
T ss_dssp ------------------------------------------------------------------HHTSS--CHHHHHH
T ss_pred ------------------------------------------------------------------HHHhc--CHHHHHH
Confidence 11111 1245667
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeE-EeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFR-LVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~-l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
+.++..++++++.+.|+++|+++ +. ++..+.+.+.+.. .+ ..++.+.|.++| +.+.++.
T Consensus 268 ~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~--~~---------------~~~l~~~l~~~g-i~v~~g~ 327 (361)
T 3ftb_A 268 SLLWIKKERKRFIEELNKIGFIKRVF--SPHANFVLCRLEN--IS---------------GEKLYDSLLKED-IVIRRCC 327 (361)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSEEEEE--CCSSSEEEEEESS--SC---------------HHHHHHHHHTTT-EECEECT
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceec--CCCCeEEEEEcCC--CC---------------HHHHHHHHHHCC-eEEeeCc
Confidence 78888899999999999999998 65 4455555554321 11 237889999998 5555543
Q ss_pred cCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 398 LQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 398 ~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
..+...++++|++++ +++|+++++++|+++.+.
T Consensus 328 ~~~~~~~~~iRis~~-----~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 328 NFIGLDDSFVRFAIK-----DEKKNTKFLRALKGVENN 360 (361)
T ss_dssp TSTTCCTTEEEEECC-----CHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCCCEEEEEcC-----CHHHHHHHHHHHHHHHhc
Confidence 332222479999993 889999999999988753
No 96
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.86 E-value=2.2e-20 Score=188.65 Aligned_cols=287 Identities=15% Similarity=0.141 Sum_probs=186.3
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHH-HH--HHhCCCCCcEEEEecC-CCCCcCHH
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLK-AA--HWLGIGMDNVIRVKTN-ERGQMICS 81 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~-~~--~~~g~~~~~v~~v~~~-~~g~id~e 81 (448)
+++++||+++..++.++.. +++.|+++..+|.++.. .+ ...|.+. ++..++.+ +++.+|++
T Consensus 89 i~~~sGt~a~~~a~~~~~~--------------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~d~~ 153 (405)
T 2vi8_A 89 VQPHSGAQANMAVYFTVLE--------------HGDTVLGMNLSHGGHLTHGSPVNFSGVQY-NFVAYGVDPETHVIDYD 153 (405)
T ss_dssp CCCSSHHHHHHHHHHHHCC--------------TTCEEEEECGGGTCCTTTTCTTSHHHHHS-EEEEECBCTTTCSBCHH
T ss_pred EEecCcHHHHHHHHHHhcC--------------CCCEEEEecccccchhcccchhhhcccee-EEEecccccccCCcCHH
Confidence 4556779999998877633 56678888889987643 11 2223211 46666665 56789999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+|++++++. ++++|+++ + +..|...|+++|.++|++||+++|+|++|+.+....+... ..+...|+++.+
T Consensus 154 ~l~~~i~~~-----~~~~v~~~-~-~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~---~~~~~~di~~~s 223 (405)
T 2vi8_A 154 DVREKARLH-----RPKLIVAA-A-AAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHP---NPVPYAHFVTTT 223 (405)
T ss_dssp HHHHHHHHH-----CCSEEEEC-C-SSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC---CSTTTCSEEEEE
T ss_pred HHHHHHHhc-----CCeEEEEe-C-CCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCC---CccccCCEEEEe
Confidence 999999752 35676663 2 3357788999999999999999999999996554322211 112347999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+||++++|.| |++++++ ++..........+.. .+..
T Consensus 224 ~sK~~~g~~g-G~~~~~~-~~~~~l~~~~~~~~~------------------~~~~------------------------ 259 (405)
T 2vi8_A 224 THKTLRGPRG-GMILCQE-QFAKQIDKAIFPGIQ------------------GGPL------------------------ 259 (405)
T ss_dssp SSSTTCCCSC-EEEEECH-HHHHHHHHHHTTTTC------------------SSCC------------------------
T ss_pred ccccCCCCCC-eEEEEcH-HHHHHHHhhhccccc------------------CCCC------------------------
Confidence 9999998888 8888763 333322110000000 0000
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
.....++..+++.....+++++.+
T Consensus 260 --------------------------------------------------------~~~~aa~~~al~~~~~~~~~~~~~ 283 (405)
T 2vi8_A 260 --------------------------------------------------------MHVIAAKAVAFGEALQDDFKAYAK 283 (405)
T ss_dssp --------------------------------------------------------HHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred --------------------------------------------------------HHHHHHHHHHHHHHHhhhHHHHHH
Confidence 001112233455545567888999
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccC-CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeec--
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPE-FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPL-- 398 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~-- 398 (448)
+..++++++.+.|+++ |++++ .+ .....+.+.+.+.+.. ..++.+.|.++| +.+.++..
T Consensus 284 ~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~g-i~v~~g~~~~ 345 (405)
T 2vi8_A 284 RVVDNAKRLASALQNE-GFTLV-SGGTDNHLLLVDLRPQQLT---------------GKTAEKVLDEVG-ITVNKNTIPY 345 (405)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEG-GGSCSSSEEEEECGGGTCC---------------HHHHHHHHHHHT-EECEEECCTT
T ss_pred HHHHHHHHHHHHHHhC-CCeEe-cCCCCceEEEEEccCCCCC---------------HHHHHHHHHHcC-ceeccCcCcc
Confidence 9999999999999998 99986 43 2344555544221111 236778888888 44444321
Q ss_pred --CCcccccEEEEEecCCC----CCCHHHHHHHHHHHHHHHHHhH
Q psy14299 399 --QHRNLHNFFRLVTTCHP----ASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 399 --~g~~~~~~lRis~~~~~----~~t~edid~l~~al~~~~~~~~ 437 (448)
.+...++++|+++. . .++++|+++++++|+++.+++.
T Consensus 346 ~~~~~~~~~~iRis~~--~~~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 346 DPESPFVTSGIRIGTA--AVTTRGFGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp CSSCTTTCSEEEEECH--HHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred ccCCCCCCCceEEeee--eeeecCCCHHHHHHHHHHHHHHHhccc
Confidence 11112368999994 3 4689999999999999987654
No 97
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.86 E-value=5.7e-20 Score=183.38 Aligned_cols=271 Identities=11% Similarity=0.046 Sum_probs=189.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec-CCCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT-NERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~-~~~g~id~e~ 82 (448)
..++|+|||+++..++.+... +++.|+++...|.++...++..|. +++.+|. ++++ +|+++
T Consensus 84 ~v~~~~g~~~a~~~~~~~l~~--------------~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~-~d~~~ 145 (365)
T 3get_A 84 NIIIGAGSDQVIEFAIHSKLN--------------SKNAFLQAGVTFAMYEIYAKQCGA---KCYKTQSITHNL-DEFKK 145 (365)
T ss_dssp GEEEESSHHHHHHHHHHHHCC--------------TTCEEEECSSCCTHHHHHHHHHTC---EEEECSSSSCCH-HHHHH
T ss_pred eEEECCCHHHHHHHHHHHHhC--------------CCCEEEEeCCChHHHHHHHHHcCC---EEEEEecCCCCC-CCHHH
Confidence 578999999999888776533 567899999999999999999998 7889998 6678 99999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHH--HcCCEEEEecccccccc--c----ccchhhhhcCCCC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCE--KYDLWMHVDACWGGSLI--F----SEKYSFVLKGINR 154 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~--~~g~~l~VD~A~~~~~~--~----~~~~~~~~~~~~~ 154 (448)
|++++++ ++++|++++++|++|.+.|++++.++++ ++|+++++|++|+.+.+ . .+.... .. ...
T Consensus 146 l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~-~~~ 217 (365)
T 3get_A 146 LYETHKD------EIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCEL-IK-EFD 217 (365)
T ss_dssp HHHHTTT------TEEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHH-HH-HCT
T ss_pred HHHHhCC------CCCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHH-hc-cCC
Confidence 9999863 5889999999999999999999999988 77999999999985442 1 111111 11 113
Q ss_pred ccEEEECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChH
Q psy14299 155 ANSVSWNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 233 (448)
Q Consensus 155 aD~~~~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 233 (448)
.++++.|+||+++.| ..+|+++. ++++..........| + ...+
T Consensus 218 ~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~-----------------~------~~~~------------ 261 (365)
T 3get_A 218 NVLYLGTFSKLYGLGGLRIGYGIA-NANIISAFYKLRAPF-----------------N------VSNL------------ 261 (365)
T ss_dssp TEEEEEESSSTTSCTTTCCEEEEE-CHHHHHHHHHHSCTT-----------------C------SCHH------------
T ss_pred CEEEEeecchHhcCcchheEEEEc-CHHHHHHHHHhcCCC-----------------C------cCHH------------
Confidence 468888999998744 46788877 444433322111000 0 0000
Q ss_pred HHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcC
Q psy14299 234 GFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 313 (448)
Q Consensus 234 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (448)
.+..+..+++. .
T Consensus 262 ------------------------------------------------------------------~~~~~~~~l~~--~ 273 (365)
T 3get_A 262 ------------------------------------------------------------------ALKAAVAAMDD--D 273 (365)
T ss_dssp ------------------------------------------------------------------HHHHHHHHHTC--H
T ss_pred ------------------------------------------------------------------HHHHHHHHhCC--H
Confidence 01111122221 1
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEE
Q psy14299 314 LGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMI 393 (448)
Q Consensus 314 ~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~ 393 (448)
++++++.++..++++++.+.|+++ |+++. ++..+.+.+.+ +.. + ..++.+.|.++| +.+
T Consensus 274 ~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~--~~~~~~~~~~~-~~~-~---------------~~~~~~~l~~~g-i~v 332 (365)
T 3get_A 274 EFTEKTLENNFSQMELYKEFAKKH-NIKII--DSYTNFITYFF-DEK-N---------------STDLSEKLLKKG-III 332 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT-TCEEC--CCSSSEEEEEC-SSS-C---------------HHHHHHHHHTTT-EEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCEEC--CCCCeEEEEEC-CCC-C---------------HHHHHHHHHHCC-EEE
Confidence 456778888889999999999998 99875 34444444433 111 1 237888999998 555
Q ss_pred EeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHH
Q psy14299 394 GYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRG 433 (448)
Q Consensus 394 ~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~ 433 (448)
.++...+ ++++|+++ + +++|+++++++|+++.
T Consensus 333 ~~g~~~~---~~~iRis~--~---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 333 RNLKSYG---LNAIRITI--G---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp EECGGGT---CSEEEEEC--C---CHHHHHHHHHHHHHHH
T ss_pred EECccCC---CCEEEEEc--C---CHHHHHHHHHHHHHHh
Confidence 5543333 37999998 3 8999999999999864
No 98
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.85 E-value=4.8e-20 Score=184.63 Aligned_cols=283 Identities=11% Similarity=0.059 Sum_probs=188.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
.+++|+|||+++..++.+... +++.|+++...|.++...++..|. +++.++.++ ++.+|++
T Consensus 83 ~v~~~~g~~~a~~~~~~~l~~--------------~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~ 145 (375)
T 3op7_A 83 QILQTNGATGANLLVLYSLIE--------------PGDHVISLYPTYQQLYDIPKSLGA---EVDLWQIEEENGWLPDLE 145 (375)
T ss_dssp GEEEESHHHHHHHHHHHHHCC--------------TTCEEEEEESSCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHH
T ss_pred hEEEcCChHHHHHHHHHHhcC--------------CCCEEEEeCCCchhHHHHHHHcCC---EEEEEeccccCCCCCCHH
Confidence 579999999999998877643 567899999999999999999998 788888763 4568999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
+|++++++ ++++|++++++|++|.+.| +++|.++|++||+++++|++|+..... +. ..... ....+.+
T Consensus 146 ~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~-~~-~~~~~-~~~~~i~ 216 (375)
T 3op7_A 146 KLRQLIRP------TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL-DV-PSIIE-VYDKGIA 216 (375)
T ss_dssp HHHHHCCT------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS-CC-CCHHH-HCTTEEE
T ss_pred HHHHhhcc------CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc-CC-Cchhh-hcCCEEE
Confidence 99999864 5789999999999999999 999999999999999999998875442 10 10011 1124577
Q ss_pred EECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 159 SWNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 159 ~~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
+.+++|+++.| ..+|+++. ++++..........+.. ....+..+++
T Consensus 217 ~~s~sK~~~~~G~r~G~v~~-~~~l~~~~~~~~~~~~~---------------------~~~~~~~~~~----------- 263 (375)
T 3op7_A 217 VNSLSKTYSLPGIRIGWVAA-NHQVTDILRDYRDYTMI---------------------CAGVFDDLVA----------- 263 (375)
T ss_dssp EEESSSSSSCGGGCCEEEEC-CHHHHHHHTTTGGGTTS---------------------CCCHHHHHHH-----------
T ss_pred EeEChhhcCCcccceEEEEe-CHHHHHHHHHHHhhhcc---------------------CCCcHHHHHH-----------
Confidence 88999999744 33577766 44444433211100000 0001111111
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
..+++. ....++
T Consensus 264 -------------------------------------------------------------------~~~l~~-~~~~~~ 275 (375)
T 3op7_A 264 -------------------------------------------------------------------QLALAH-YQEILE 275 (375)
T ss_dssp -------------------------------------------------------------------HHHHHT-HHHHHH
T ss_pred -------------------------------------------------------------------HHHHhc-cHHHHH
Confidence 111111 112345
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHH-hCCcEEEEee
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV-LGGTLMIGYQ 396 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g~~~~~~~ 396 (448)
++.++..++++++.+.|+++|+++++ . +..+.+.|...+.+.+ ..++.+.|+ ++| +.+.++
T Consensus 276 ~~~~~~~~~~~~l~~~l~~~~~~~~~-~-~~~~~~~~~~~~~~~~---------------~~~~~~~ll~~~g-i~v~~g 337 (375)
T 3op7_A 276 RNRHILEENLAILDQWIEEEPLVSYI-R-PAVVSTSFVKIAVDMP---------------MEDFCLQLLQEHG-VLLVPG 337 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTEEEC-C-CSSSSCEEEEECCSSC---------------HHHHHHHHHHHHC-EECEEG
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceEe-c-CCCeEEEeEEcCCCCC---------------HHHHHHHHHHhCC-EEEeCh
Confidence 56667788899999999999999875 3 3333333322232221 236777774 678 555544
Q ss_pred ecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 397 PLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 397 ~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
...+. ++++|++++ .++++++++++.|+++.+++.
T Consensus 338 ~~~~~--~~~iRi~~~----~~~~~i~~~l~~l~~~l~~~~ 372 (375)
T 3op7_A 338 NRFER--DGYVRLGFA----CEQETLIKGLEKLSQFLRRFD 372 (375)
T ss_dssp GGGTC--TTEEEECCC----SCHHHHHHHHHHHHHHHGGGC
T ss_pred hhhCC--CCeEEEEec----CCHHHHHHHHHHHHHHHHHHh
Confidence 33221 379999984 245899999999999887654
No 99
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.85 E-value=6.7e-20 Score=186.93 Aligned_cols=143 Identities=12% Similarity=0.062 Sum_probs=114.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHH----hCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHW----LGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~----~g~~~~~v~~v~~~~~g~id 79 (448)
.+++|+|||+||..++.++.. +++.|+++..+|.++...+.. .|. +++.++. |
T Consensus 73 ~~~~~~~gt~a~~~al~~l~~--------------~gd~vi~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~------~ 129 (412)
T 2cb1_A 73 EAVVLASGQAATFAALLALLR--------------PGDEVVAAKGLFGQTIGLFGQVLSLMGV---TVRYVDP------E 129 (412)
T ss_dssp EEEEESSHHHHHHHHHHTTCC--------------TTCEEEEETTCCHHHHHHHHHTTTTTTC---EEEEECS------S
T ss_pred cEEEECCHHHHHHHHHHHHhC--------------CCCEEEEeCCCchhHHHHHHHHHHHcCC---EEEEECC------C
Confidence 578999999999998876522 566788999999988877543 455 6777775 3
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+++|++++++ ++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+........ ..+|+++
T Consensus 130 ~~~l~~~i~~------~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~------~~~di~~ 197 (412)
T 2cb1_A 130 PEAVREALSA------KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRPLA------WGAHVVV 197 (412)
T ss_dssp HHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGG------GTCSEEE
T ss_pred HHHHHHHhcc------CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCccc------cCCeEEE
Confidence 8899988854 588999999999999999999999999999999999999987722111111 1479999
Q ss_pred ECCccccCCCCc-eEEEEEeccc
Q psy14299 160 WNPHKMLGAPLQ-CSILLIKEKG 181 (448)
Q Consensus 160 ~s~hK~l~~P~g-~G~l~vr~~~ 181 (448)
.|+||++++|.+ .|.+++.++.
T Consensus 198 ~S~~K~~~~~~~~~G~~~~~~~~ 220 (412)
T 2cb1_A 198 ESLTKWASGHGSVLGGAVLSRET 220 (412)
T ss_dssp EETTTTTTCSSCCCCEEEEECCC
T ss_pred ECCcccccCCCCcEEEEEEeccc
Confidence 999999999987 7887776643
No 100
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.85 E-value=6e-20 Score=185.12 Aligned_cols=284 Identities=9% Similarity=0.038 Sum_probs=188.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCC--CcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERG--QMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g--~id~e 81 (448)
..++|+|||+++..++.+... +++.|+++...|.++...++..|. +++.+|.++++ .+|++
T Consensus 93 ~v~~t~g~~~al~~~~~~l~~--------------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~ 155 (391)
T 3h14_A 93 RVVITPGSSGGFLLAFTALFD--------------SGDRVGIGAPGYPSYRQILRALGL---VPVDLPTAPENRLQPVPA 155 (391)
T ss_dssp GEEEESSHHHHHHHHHHHHCC--------------TTCEEEEEESCCHHHHHHHHHTTC---EEEEEECCGGGTTSCCHH
T ss_pred HEEEecChHHHHHHHHHHhcC--------------CCCEEEEcCCCCccHHHHHHHcCC---EEEEeecCcccCCCCCHH
Confidence 579999999999888876543 567788999999999999999998 78999987644 77999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
+|+++ ++++|++++++|++|.+.| +++|+++|++||+++++|++|+.......... .......+++
T Consensus 156 ~l~~~---------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~i~ 224 (391)
T 3h14_A 156 DFAGL---------DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVT--ALELTDECYV 224 (391)
T ss_dssp HHTTS---------CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCC--GGGTCSSSEE
T ss_pred HHHhc---------CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcC--hhhcCCCEEE
Confidence 98776 3678999999999999987 88999999999999999999986543211101 1112234678
Q ss_pred EECCccccC-CCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 159 SWNPHKMLG-APLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 159 ~~s~hK~l~-~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
+.+++|+++ ...++|+++.+++ +..........+..
T Consensus 225 ~~s~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~~------------------------------------------ 261 (391)
T 3h14_A 225 INSFSKYFSMTGWRVGWMVVPED-QVRVVERIAQNMFI------------------------------------------ 261 (391)
T ss_dssp EEESSSTTCCTTSCCEEEECCGG-GHHHHHHHHHHTTC------------------------------------------
T ss_pred EEechhccCCccceeEEEEeCHH-HHHHHHHHHhhhcc------------------------------------------
Confidence 889999997 3445787776443 32221110000000
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
+.+.+.+..+..+++ ..++++
T Consensus 262 ---------------------------------------------------------~~~~~~~~a~~~~l~--~~~~~~ 282 (391)
T 3h14_A 262 ---------------------------------------------------------CAPHASQVAALAALD--CDAELQ 282 (391)
T ss_dssp ---------------------------------------------------------CCCHHHHHHHHHHTT--CHHHHH
T ss_pred ---------------------------------------------------------CCCHHHHHHHHHHhC--ChHHHH
Confidence 000011111112222 334567
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeecc-CCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEEEe
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPV-SLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMIGY 395 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~~~ 395 (448)
++.++..++++++.+.|+++ ++..+ .++..+.+.+...+. +.+ ..++.+.|.++ | +.+.+
T Consensus 283 ~~~~~~~~~~~~l~~~l~~~-~~~~~-~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~~g-i~v~~ 344 (391)
T 3h14_A 283 ANLDVYKANRKLMLERLPKA-GFTRI-APPDGAFYVYADVSDLTDD---------------SRAFAAEILEKAG-VAVTP 344 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TCCCB-CCCCBTTEEEEECTTTCSC---------------HHHHHHHHHHHHC-EECEE
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCCcc-cCCCeeEEEEEecCccCCC---------------HHHHHHHHHHHCC-EEEcC
Confidence 77888889999999999988 44433 344444444422221 111 23678887776 8 55555
Q ss_pred eecCCc-ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHHh
Q psy14299 396 QPLQHR-NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDLE 439 (448)
Q Consensus 396 ~~~~g~-~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~~ 439 (448)
+...+. ..++++|+++. . +++|++++++.|+++.++....
T Consensus 345 g~~~~~~~~~~~iRis~~--~--~~~~i~~~l~~l~~~~~~~~~~ 385 (391)
T 3h14_A 345 GLDFDPERGAGTLRFSYA--R--ATADIEEGLDRLEAFMQARGEG 385 (391)
T ss_dssp GGGTCTTTGGGEEEEECC--S--CHHHHHHHHHHHHHHHHHC---
T ss_pred chhhCCCCCCCeEEEEec--C--CHHHHHHHHHHHHHHHHHhccc
Confidence 433332 23479999994 2 7899999999999998876543
No 101
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.85 E-value=1e-20 Score=187.38 Aligned_cols=157 Identities=18% Similarity=0.186 Sum_probs=111.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHH---HHHHhCCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLK---AAHWLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~---~~~~~g~~~~~v~~v~~~~~g~id~ 80 (448)
..++|+|||+++.+++.+... +++.|+++..+|.+... .+...|. +++.+ .++++.+|+
T Consensus 55 ~~~~~~~gt~a~~~~~~~~~~--------------~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v-~~~~~~~d~ 116 (347)
T 1jg8_A 55 AALFVPSGTMGNQVSIMAHTQ--------------RGDEVILEADSHIFWYEVGAMAVLSGV---MPHPV-PGKNGAMDP 116 (347)
T ss_dssp EEEEESCHHHHHHHHHHHHCC--------------TTCEEEEETTCHHHHSSTTHHHHHTCC---EEEEE-CEETTEECH
T ss_pred eEEEecCcHHHHHHHHHHhcC--------------CCCEEEEcCcchhhhccccchhhccCe---EEEEe-cCCCCccCH
Confidence 468999999998888765432 66789999999987654 5566777 67777 556788999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCcc-ccccC---HHHHHHHHHHcCCEEEEecccccccccc-c-chhhhhcCCCC
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVL-GAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFS-E-KYSFVLKGINR 154 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~t-G~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~-~-~~~~~~~~~~~ 154 (448)
++|++++++......++++|++++++|++ |.+.| +++|.++|++||+++++|+||..+.... + ....... .
T Consensus 117 ~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~---~ 193 (347)
T 1jg8_A 117 DDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG---Y 193 (347)
T ss_dssp HHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHH---T
T ss_pred HHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcc---c
Confidence 99999985310011258899999999999 98866 5788999999999999999875432111 1 0111111 3
Q ss_pred ccEEEECCccccCCCCceEEEEEeccchh
Q psy14299 155 ANSVSWNPHKMLGAPLQCSILLIKEKGLL 183 (448)
Q Consensus 155 aD~~~~s~hK~l~~P~g~G~l~vr~~~~~ 183 (448)
+|.+++++||++++|.| .+++.++++.
T Consensus 194 ~d~~~~s~sK~l~~~~G--~~~~~~~~~~ 220 (347)
T 1jg8_A 194 ADSVMFCLSKGLCAPVG--SVVVGDRDFI 220 (347)
T ss_dssp CSEEEEESSSTTCCSSC--EEEEECHHHH
T ss_pred ccEEEEecccccCCCce--EEEEcCHHHH
Confidence 68889999999998754 3344454443
No 102
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.85 E-value=5.4e-20 Score=185.68 Aligned_cols=276 Identities=12% Similarity=0.022 Sum_probs=189.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
.+++|+|||+++..++.++.. +++.|+++..+|.++...++..|. +++.+|.++ ++.+|++
T Consensus 103 ~v~~~~g~t~al~~~~~~l~~--------------~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~ 165 (389)
T 1o4s_A 103 QVVVTNGAKQALFNAFMALLD--------------PGDEVIVFSPVWVSYIPQIILAGG---TVNVVETFMSKNFQPSLE 165 (389)
T ss_dssp GEEEESHHHHHHHHHHHHHCC--------------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCGGGTTCCCHH
T ss_pred HEEEecCHHHHHHHHHHHhCC--------------CCCEEEEcCCCchhHHHHHHHcCC---EEEEEecCCccCCCCCHH
Confidence 578999999999988877632 567788999999999999999888 788999875 4688999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccch-hhhhcCCCCccE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKY-SFVLKGINRANS 157 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~-~~~~~~~~~aD~ 157 (448)
+|++++++ ++++|++++++|++|.+.| +++|.++|++||+++++|++|+.+....+.. -..+.+....|+
T Consensus 166 ~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i 239 (389)
T 1o4s_A 166 EVEGLLVG------KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIV 239 (389)
T ss_dssp HHHHTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEE
T ss_pred HHHHhccc------CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEE
Confidence 99998854 4788999999999999877 9999999999999999999999765421100 011222235789
Q ss_pred EEECCccccCCCCc--eEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHH
Q psy14299 158 VSWNPHKMLGAPLQ--CSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 235 (448)
Q Consensus 158 ~~~s~hK~l~~P~g--~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ 235 (448)
++.++||+++ ++| +|++++++ ++..........+.. +
T Consensus 240 ~~~s~sK~~~-~~G~r~G~l~~~~-~~~~~l~~~~~~~~~-----------------------------------~---- 278 (389)
T 1o4s_A 240 YINGFSKSHS-MTGWRVGYLISSE-KVATAVSKIQSHTTS-----------------------------------C---- 278 (389)
T ss_dssp EEEESTTTTT-CGGGCCEEEECCH-HHHHHHHHHHHHHTC-----------------------------------S----
T ss_pred EEeechhhcC-CcccceEEEEeCH-HHHHHHHHHhhhccc-----------------------------------C----
Confidence 9999999996 445 78888754 333222110000000 0
Q ss_pred HHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCcc
Q psy14299 236 RHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 315 (448)
Q Consensus 236 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 315 (448)
.+ .+....+...+.. +
T Consensus 279 ------------------------------------------------------------~~---~~~~~a~~~~l~~-~ 294 (389)
T 1o4s_A 279 ------------------------------------------------------------IN---TVAQYAALKALEV-D 294 (389)
T ss_dssp ------------------------------------------------------------CC---HHHHHHHHHHTTC-C
T ss_pred ------------------------------------------------------------CC---HHHHHHHHHHHhc-c
Confidence 00 0000111112222 3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHH-hCCcEEEE
Q psy14299 316 FRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV-LGGTLMIG 394 (448)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g~~~~~ 394 (448)
++++.++..++++++.+.|+++ |++++ . +..+.+.+...+ .+ ..++.+.|. ++| +.+.
T Consensus 295 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~-~~~~~~~~~~~~--~~---------------~~~l~~~l~~~~g-i~v~ 353 (389)
T 1o4s_A 295 NSYMVQTFKERKNFVVERLKKM-GVKFV-E-PEGAFYLFFKVR--GD---------------DVKFCERLLEEKK-VALV 353 (389)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT-TCCCC-C-CSBSSEEEEECS--SC---------------HHHHHHHHHHHHC-EECE
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCeee-c-CCcceEEEEeCC--CC---------------HHHHHHHHHHHCC-EEEe
Confidence 7778888899999999999998 88875 3 444544442212 11 236888887 778 5555
Q ss_pred eeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 395 YQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 395 ~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
++...+. ++++|+++. +++++++++++.|+++.+
T Consensus 354 ~g~~f~~--~~~~Ris~~----~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 354 PGSAFLK--PGFVRLSFA----TSIERLTEALDRIEDFLN 387 (389)
T ss_dssp EGGGGTC--TTEEEEECC----SCHHHHHHHHHHHHHHHT
T ss_pred CchhcCC--CCeEEEEEe----CCHHHHHHHHHHHHHHHh
Confidence 4432222 369999994 389999999999987753
No 103
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.85 E-value=1.9e-20 Score=187.38 Aligned_cols=275 Identities=9% Similarity=0.058 Sum_probs=184.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|||+++..++.++.. +++.|+++..+|.++...++..|. +++.+| +|+++|
T Consensus 91 ~v~~~~g~~~a~~~~~~~~~~--------------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~------~d~~~l 147 (370)
T 2z61_A 91 NIIITGGSSLGLFFALSSIID--------------DGDEVLIQNPCYPCYKNFIRFLGA---KPVFCD------FTVESL 147 (370)
T ss_dssp GEEEESSHHHHHHHHHHHHCC--------------TTCEEEEESSCCTHHHHHHHHTTC---EEEEEC------SSHHHH
T ss_pred hEEECCChHHHHHHHHHHhcC--------------CCCEEEEeCCCchhHHHHHHHcCC---EEEEeC------CCHHHH
Confidence 589999999999988877633 567789999999999999999888 677777 699999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchh-hhhcCCCCccEEEECC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYS-FVLKGINRANSVSWNP 162 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~-~~~~~~~~aD~~~~s~ 162 (448)
++++++ ++++|++++++|++|.+.|++ |.++|++||+++++|++|+.+........ ..+.+....|+++.++
T Consensus 148 ~~~l~~------~~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~ 220 (370)
T 2z61_A 148 EEALSD------KTKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGF 220 (370)
T ss_dssp HHHCCS------SEEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEES
T ss_pred HHhccc------CceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecC
Confidence 998854 478899999999999999999 99999999999999999997654211000 1111123568999999
Q ss_pred ccccCCCCc--eEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 163 HKMLGAPLQ--CSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 163 hK~l~~P~g--~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
||+++ ++| +|+++.++ ++..........+... ...+.
T Consensus 221 sK~~~-~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~---------------------~~~~~------------------ 259 (370)
T 2z61_A 221 SKLYA-MTGWRIGYVISND-EIIEAILKLQQNLFIS---------------------APTIS------------------ 259 (370)
T ss_dssp TTTTT-CGGGCCEEEECCH-HHHHHHHHHHHHHTSS---------------------SCHHH------------------
T ss_pred hhccC-CccceEEEEEECH-HHHHHHHHHHhhcccC---------------------CCHHH------------------
Confidence 99986 445 78887755 3333221100000000 00000
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
+..+..+++..+.++++++.
T Consensus 260 ------------------------------------------------------------~~a~~~~l~~~~~~~~~~~~ 279 (370)
T 2z61_A 260 ------------------------------------------------------------QYAALKAFEKETEREINSMI 279 (370)
T ss_dssp ------------------------------------------------------------HHHHGGGGSHHHHHHHHHHH
T ss_pred ------------------------------------------------------------HHHHHHHHhccCHHHHHHHH
Confidence 00001111110123466677
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHH-hCCcEEEEeeecC
Q psy14299 321 DNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV-LGGTLMIGYQPLQ 399 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g~~~~~~~~~~ 399 (448)
++..++++++.+.|+++ |+++. .+..+.+.+...+. + ..++.+.|. ++| +.+.++...
T Consensus 280 ~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~~--~---------------~~~~~~~l~~~~g-i~v~~g~~f 338 (370)
T 2z61_A 280 KEFDRRRRLVLKYVKDF-GWEVN--NPIGAYYVFPNIGE--D---------------GREFAYKLLKEKF-VALTPGIGF 338 (370)
T ss_dssp HHHHHHHHHHHHHHHHT-TCBCC--CCCBTTEECCBCSS--C---------------HHHHHHHHHHHHC-EECEEGGGG
T ss_pred HHHHHHHHHHHHHHHHc-CCeec--CCCcceEEEEecCC--C---------------HHHHHHHHHHhCC-EEEeCchhh
Confidence 88889999999999998 88765 34444443311111 1 236788887 678 555544322
Q ss_pred CcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 400 HRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 400 g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
+...++++|+++ + +++++++++++.|+++.+
T Consensus 339 ~~~~~~~~Ri~~--~--~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 339 GSKGKNYIRISY--A--NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp CGGGSSBEEEEC--C--SCHHHHHHHHHHHHHHHC
T ss_pred CCCCCCEEEEEE--e--CCHHHHHHHHHHHHHHHh
Confidence 211237899999 4 699999999999987753
No 104
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.85 E-value=4.1e-19 Score=177.83 Aligned_cols=272 Identities=11% Similarity=0.010 Sum_probs=188.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+|+++..++.+... +++.|+++..+|.++...++..|. +++.+|.++++.+|+++|
T Consensus 94 ~v~~~~G~~~al~~~~~~l~~--------------~gd~Vl~~~~~y~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l 156 (369)
T 3cq5_A 94 NLWAANGSNEILQQLLQAFGG--------------PGRTALGFQPSYSMHPILAKGTHT---EFIAVSRGADFRIDMDVA 156 (369)
T ss_dssp GEEEESHHHHHHHHHHHHHCS--------------TTCEEEEEESSCTHHHHHHHHTTC---EEEEEECCTTSSCCHHHH
T ss_pred hEEECCChHHHHHHHHHHhcC--------------CCCEEEEcCCChHHHHHHHHHcCC---EEEEecCCcCCCCCHHHH
Confidence 478999999998888766533 567788999999999999999888 788999887789999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++++++. ++++|++++++|++|.+.|++++.++++.+++++++|++|+.+....+.. .........++++.++|
T Consensus 157 ~~~i~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~i~~~s~s 230 (369)
T 3cq5_A 157 LEEIRAK-----QPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSAT-TLLEKYPTKLVVSRTMS 230 (369)
T ss_dssp HHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGG-GGTTTCTTTEEEEEESS
T ss_pred HHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchH-HHHhhCCCCEEEEEech
Confidence 9999752 36788899999999999999999999999999999999998765321111 11111111458889999
Q ss_pred cccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 164 KMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 164 K~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
|+++.|. .+|++++++ ++..........| + ...+..++
T Consensus 231 K~~~~~G~r~G~~~~~~-~~~~~l~~~~~~~-----------------~------~~~~~~~a----------------- 269 (369)
T 3cq5_A 231 KAFDFAGGRLGYFVANP-AFIDAVMLVRLPY-----------------H------LSALSQAA----------------- 269 (369)
T ss_dssp STTSCGGGCCEEEEECT-HHHHHHHTTSCTT-----------------C------SCHHHHHH-----------------
T ss_pred HhcCCcccceEEEEeCH-HHHHHHHHcCCCC-----------------C------CCHHHHHH-----------------
Confidence 9997552 368888854 3333322111100 0 00111111
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 322 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 322 (448)
+..+++. .++++++.++
T Consensus 270 -------------------------------------------------------------~~~~l~~--~~~~~~~~~~ 286 (369)
T 3cq5_A 270 -------------------------------------------------------------AIVALRH--SADTLGTVEK 286 (369)
T ss_dssp -------------------------------------------------------------HHHHHHT--HHHHHTHHHH
T ss_pred -------------------------------------------------------------HHHHhcC--HHHHHHHHHH
Confidence 1111221 1235567778
Q ss_pred HHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcc
Q psy14299 323 AVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRN 402 (448)
Q Consensus 323 ~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~ 402 (448)
..++++++.+.|++. |+++. ++..+.+.+.+ + .+ ..++.+.|.++| +.+.+. +
T Consensus 287 ~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~-~--~~---------------~~~l~~~l~~~g-i~v~~~---~-- 339 (369)
T 3cq5_A 287 LSVERVRVAARLEEL-GYAVV--PSESNFVFFGD-F--SD---------------QHAAWQAFLDRG-VLIRDV---G-- 339 (369)
T ss_dssp HHHHHHHHHHHHHHH-TCEEE--CCSSSEEEEEC-C--SS---------------HHHHHHHHHHTT-EECBCC---S--
T ss_pred HHHHHHHHHHHHHhC-CCEEC--CCCCeEEEEEC-C--CC---------------HHHHHHHHHHCC-EEEEEC---C--
Confidence 888899999999885 88886 34445554433 1 11 136788888888 555443 2
Q ss_pred cccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 403 LHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 403 ~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
.++++|+++ + +++|+++++++|+++.+
T Consensus 340 ~~~~iRis~--~---~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 340 IAGHLRTTI--G---VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp CTTEEEEEC--C---CHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEe--C---CHHHHHHHHHHHHHHHh
Confidence 137899999 3 78999999999998753
No 105
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.85 E-value=1.5e-20 Score=190.97 Aligned_cols=285 Identities=12% Similarity=0.039 Sum_probs=189.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC---CCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER---GQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~---g~id~ 80 (448)
.+++|+|||+++..++.++.. +++.|+++..+|.++...++..|. +++.+|.+++ +.+|+
T Consensus 88 ~v~~t~g~~~al~~~~~~~~~--------------~gd~Vl~~~~~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~ 150 (411)
T 2o0r_A 88 EVLVTVGATEAIAAAVLGLVE--------------PGSEVLLIEPFYDSYSPVVAMAGA---HRVTVPLVPDGRGFALDA 150 (411)
T ss_dssp SEEEEEHHHHHHHHHHHHHCC--------------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEEETTEEECCH
T ss_pred eEEEeCCHHHHHHHHHHHhcC--------------CCCEEEEeCCCcHhHHHHHHHcCC---EEEEeeccccccCCCCCH
Confidence 689999999999988877633 567788999999999999998888 7888887653 57999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccch-h-hhhcCCCCc
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKY-S-FVLKGINRA 155 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~-~-~~~~~~~~a 155 (448)
++|++++++ ++++|++++++|++|.+.| +++|.++|++||+++++|++|+.+....... . ..+......
T Consensus 151 ~~l~~~l~~------~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 224 (411)
T 2o0r_A 151 DALRRAVTP------RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAER 224 (411)
T ss_dssp HHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGG
T ss_pred HHHHHhhcc------CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCC
Confidence 999999853 5789999999999999866 5999999999999999999998765421100 0 011111246
Q ss_pred cEEEECCccccCCCCc--eEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChH
Q psy14299 156 NSVSWNPHKMLGAPLQ--CSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 233 (448)
Q Consensus 156 D~~~~s~hK~l~~P~g--~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 233 (448)
|+++.++||+++ +.| +|++++++ ++....... ..+.. +
T Consensus 225 ~i~~~s~sK~~~-~~G~r~G~~~~~~-~~~~~l~~~-~~~~~--------------~----------------------- 264 (411)
T 2o0r_A 225 TITISSAAKMFN-CTGWKIGWACGPA-ELIAGVRAA-KQYLS--------------Y----------------------- 264 (411)
T ss_dssp EEEEEEHHHHTT-CTTTCEEEEECCH-HHHHHHHHH-HHHHT--------------S-----------------------
T ss_pred EEEEeechhhcC-CccceEEEEeeCH-HHHHHHHHH-Hhhcc--------------C-----------------------
Confidence 899999999887 445 88887743 333322110 00000 0
Q ss_pred HHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcC
Q psy14299 234 GFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 313 (448)
Q Consensus 234 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (448)
+.+.+.+.++..+++.. .
T Consensus 265 -------------------------------------------------------------~~~~~~~~a~~~~l~~~-~ 282 (411)
T 2o0r_A 265 -------------------------------------------------------------VGGAPFQPAVALALDTE-D 282 (411)
T ss_dssp -------------------------------------------------------------CCCTTHHHHHHHHHHHC-H
T ss_pred -------------------------------------------------------------CCChHHHHHHHHHHhCC-h
Confidence 00001111122223221 3
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceee-EEEEeecc-CCCccccchhhhhhhhhhhHHHHHHHH-hCCc
Q psy14299 314 LGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTN-ICFWFIPV-SLRDKVEDETWWSTLSKVAPRIKEKLV-LGGT 390 (448)
Q Consensus 314 ~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~-v~f~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g~ 390 (448)
++++++.++..++++++.+.|+++ |++++ ++..+. +.+.+... +.+ ..++.+.|. ++|
T Consensus 283 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~g~~~~~~~~~~~~~~---------------~~~~~~~l~~~~g- 343 (411)
T 2o0r_A 283 AWVAALRNSLRARRDRLAAGLTEI-GFAVH--DSYGTYFLCADPRPLGYDD---------------STEFCAALPEKVG- 343 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-TCEEC--CCCBSSEEEEECGGGTCCC---------------HHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-CCEec--CCCeeEEEEEecCCCCCCC---------------HHHHHHHHHHhCC-
Confidence 456677888889999999999988 88875 344443 34433210 011 236778776 568
Q ss_pred EEEEeeecC-Ccc----------cccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 391 LMIGYQPLQ-HRN----------LHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 391 ~~~~~~~~~-g~~----------~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
+.+.++... +.. .++++|+++. ++++|++++++.|+++.++.
T Consensus 344 i~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~----~~~e~i~~~~~~l~~~~~~~ 396 (411)
T 2o0r_A 344 VAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC----KRDDTLDEAIRRLSVLAERP 396 (411)
T ss_dssp EECEEGGGGSCCC--------CCGGGCEEEECC----SCHHHHHHHHHHHGGGGC--
T ss_pred EEEcChhhhCCCccccccccccCCCCeEEEEec----CCHHHHHHHHHHHHHHHhcc
Confidence 444443221 111 2378999993 38999999999999876543
No 106
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.85 E-value=4.9e-20 Score=185.42 Aligned_cols=279 Identities=10% Similarity=-0.005 Sum_probs=187.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e~ 82 (448)
.+++|+|||+++..++.++.. +++.|+++...|+++...++..|. +++.+|.++ ++.+|+++
T Consensus 93 ~v~~~~g~~~a~~~~~~~~~~--------------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~d~~~ 155 (386)
T 1u08_A 93 DITVTAGATEALYAAITALVR--------------NGDEVICFDPSYDSYAPAIALSGG---IVKRMALQPPHFRVDWQE 155 (386)
T ss_dssp TEEEESSHHHHHHHHHHHHCC--------------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCTTTCCCCHHH
T ss_pred CEEEcCChHHHHHHHHHHhCC--------------CCCEEEEeCCCchhHHHHHHHcCC---EEEEeecCcccCcCCHHH
Confidence 689999999999888877532 566788899999999999999888 788999876 57899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccch-hh-hhcCCCCccE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKY-SF-VLKGINRANS 157 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~-~~-~~~~~~~aD~ 157 (448)
|++++++ ++++|++++++|++|.+.| +++|.++|++||+++++|++|+......... .. .+.+....|+
T Consensus 156 l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i 229 (386)
T 1u08_A 156 FAALLSE------RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAV 229 (386)
T ss_dssp HHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEE
T ss_pred HHHhhcc------cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEE
Confidence 9999843 5789999999999999875 6899999999999999999998744311100 00 0100113689
Q ss_pred EEECCccccCCCCc--eEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHH
Q psy14299 158 VSWNPHKMLGAPLQ--CSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 235 (448)
Q Consensus 158 ~~~s~hK~l~~P~g--~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ 235 (448)
++.++||+++. .| +|++++++ ++........ .+.. +
T Consensus 230 ~~~s~sK~~~~-~G~r~G~~~~~~-~~~~~l~~~~-~~~~--------------~------------------------- 267 (386)
T 1u08_A 230 AVSSFGKTYHM-TGWKVGYCVAPA-PISAEIRKVH-QYLT--------------F------------------------- 267 (386)
T ss_dssp EEEEHHHHTTC-GGGCCEEEECCH-HHHHHHHHHH-HHHT--------------S-------------------------
T ss_pred EEecchhhcCC-cccceEEEEcCH-HHHHHHHHHH-Hhhc--------------c-------------------------
Confidence 99999999874 45 78887754 3332221100 0000 0
Q ss_pred HHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCcc
Q psy14299 236 RHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 315 (448)
Q Consensus 236 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 315 (448)
+.+.+.+..+..+++.. .++
T Consensus 268 -----------------------------------------------------------~~~~~~~~a~~~~l~~~-~~~ 287 (386)
T 1u08_A 268 -----------------------------------------------------------SVNTPAQLALADMLRAE-PEH 287 (386)
T ss_dssp -----------------------------------------------------------SCCHHHHHHHHHHHHHC-THH
T ss_pred -----------------------------------------------------------CCChHHHHHHHHHHhCC-cHH
Confidence 00011112222333332 456
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCcee-eEEEEeeccC--CCccccchhhhhhhhhhhHHHHHHHH-hCCcE
Q psy14299 316 FRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCT-NICFWFIPVS--LRDKVEDETWWSTLSKVAPRIKEKLV-LGGTL 391 (448)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~-~v~f~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g~~ 391 (448)
++++.++..++++++.+.|+++ |+++. . +..+ .+.+.+ +.. .+ ..++.+.|. ++| +
T Consensus 288 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~-~~~g~~~~~~~-~~~~~~~---------------~~~~~~~l~~~~g-i 347 (386)
T 1u08_A 288 YLALPDFYRQKRDILVNALNES-RLEIL-P-CEGTYFLLVDY-SAVSTLD---------------DVEFCQWLTQEHG-V 347 (386)
T ss_dssp HHTHHHHHHHHHHHHHHHTTSS-SCEEC-C-CCBSSEEEEEC-TTTCCSC---------------HHHHHHHHHHHSC-E
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCeec-C-CCceEEEEEec-CCCCCCC---------------HHHHHHHHHHhCC-E
Confidence 7778888999999999999998 89875 3 3433 333433 211 11 236778777 568 5
Q ss_pred EEEeee-cCC-cccccEEEEEecCCCCCCHHHHHHHHHHHHH
Q psy14299 392 MIGYQP-LQH-RNLHNFFRLVTTCHPASSRQDMDYAIDQIEL 431 (448)
Q Consensus 392 ~~~~~~-~~g-~~~~~~lRis~~~~~~~t~edid~l~~al~~ 431 (448)
.+.++. +.. ...++++|+++. ++++|++++++.|++
T Consensus 348 ~v~~g~~f~~~~~~~~~iRis~~----~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 348 AAIPLSVFCADPFPHKLIRLCFA----KKESTLLAAAERLRQ 385 (386)
T ss_dssp ECEEGGGGCSSCCCSCEEEEECC----SCHHHHHHHHHHHTT
T ss_pred EEeCchHhCCCCCCCCEEEEEEc----CCHHHHHHHHHHHhh
Confidence 554432 211 012379999993 389999999998864
No 107
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.85 E-value=1.8e-19 Score=182.39 Aligned_cols=156 Identities=17% Similarity=0.212 Sum_probs=123.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.+++|+|||+++.+++.++.. .+++.|+++..+|.++..+++..|. +++.++.++++.+|+++|
T Consensus 49 ~v~~~~ggt~al~~~~~~l~~-------------~~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l 112 (394)
T 1o69_A 49 NALALNSATAALHLALRVAGV-------------KQDDIVLASSFTFIASVAPICYLKA---KPVFIDCDETYNIDVDLL 112 (394)
T ss_dssp EEEEESCHHHHHHHHHHHTTC-------------CTTCEEEEESSSCGGGTHHHHHTTC---EEEEECBCTTSSBCHHHH
T ss_pred cEEEeCCHHHHHHHHHHHcCC-------------CCCCEEEECCCccHHHHHHHHHcCC---EEEEEEeCCCCCcCHHHH
Confidence 478999999999988877521 2567899999999999999999888 789999988889999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++++++. +.++++|++++ ++|...|+++|.++|++||+++++|++|+.+..+.+.. ...+..+|+++++.|
T Consensus 113 ~~~i~~~---~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~---~~~~~~~~~~s~s~~ 183 (394)
T 1o69_A 113 KLAIKEC---EKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKA---LGTFGEFGVYSYNGN 183 (394)
T ss_dssp HHHHHHC---SSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSSSEEEEECCTT
T ss_pred HHHHhcc---cCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCCcc---cccccCcEEEEEeCC
Confidence 9999752 11467888875 79999999999999999999999999999655433221 111224789999999
Q ss_pred cccCCCCceEEEEEeccchhhh
Q psy14299 164 KMLGAPLQCSILLIKEKGLLHQ 185 (448)
Q Consensus 164 K~l~~P~g~G~l~vr~~~~~~~ 185 (448)
|+++ |.++|+++++++++...
T Consensus 184 K~l~-~~~~G~~~~~~~~l~~~ 204 (394)
T 1o69_A 184 KIIT-TSGGGMLIGKNKEKIEK 204 (394)
T ss_dssp SSSC-CSSCEEEEESCHHHHHH
T ss_pred ccCC-CCCceEEEECCHHHHHH
Confidence 9876 67899998865554433
No 108
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.85 E-value=6.4e-20 Score=186.47 Aligned_cols=290 Identities=9% Similarity=-0.007 Sum_probs=191.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-C-CcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-G-QMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-g-~id~e 81 (448)
.+++|+|||+++..++.+... +++.|+++...|.++...++..|. +++.+|.+++ + .+|++
T Consensus 101 ~v~~t~g~~~a~~~~~~~~~~--------------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~ 163 (412)
T 2x5d_A 101 EAIVTIGSKEGLAHLMLATLD--------------HGDTILVPNPSYPIHIYGAVIAGA---QVRSVPLVPGIDFFNELE 163 (412)
T ss_dssp SEEEESCHHHHHHHHHHHHCC--------------TTCEEEEEESCCHHHHHHHHHHTC---EEEEEECSTTSCHHHHHH
T ss_pred CEEEcCChHHHHHHHHHHhCC--------------CCCEEEEcCCCchhHHHHHHHcCC---EEEEeecCCccCCCCCHH
Confidence 689999999999988877533 567788999999999999999998 7888998764 3 47889
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccch-h-hhhcCCCCcc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKY-S-FVLKGINRAN 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~-~-~~~~~~~~aD 156 (448)
+|++++++ ++++|++++++|++|.+.| +++|.++|++||+++++|++|+.+....... . ..+.+....|
T Consensus 164 ~l~~~i~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 237 (412)
T 2x5d_A 164 RAIRESIP------KPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIA 237 (412)
T ss_dssp HHHHTEES------CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTE
T ss_pred HHHHhccc------CceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcE
Confidence 99888753 4778888999999998876 6889999999999999999998865421100 0 0011112467
Q ss_pred EEEECCccccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHH
Q psy14299 157 SVSWNPHKMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 235 (448)
Q Consensus 157 ~~~~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ 235 (448)
+++.++||+++.|. .+|++++++ ++........ .+.. +
T Consensus 238 i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~l~~~~-~~~~--------------~------------------------- 276 (412)
T 2x5d_A 238 VEFFTLSKSYNMAGWRIGFMVGNP-ELVSALARIK-SYHD--------------Y------------------------- 276 (412)
T ss_dssp EEEEECC-CCSCTTSCCEEEEECH-HHHHHHHHHH-HHHC--------------C-------------------------
T ss_pred EEEecCccccCCcccceEEEEcCH-HHHHHHHHHH-hhhc--------------c-------------------------
Confidence 99999999997443 478888744 3333221100 0000 0
Q ss_pred HHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCcc
Q psy14299 236 RHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 315 (448)
Q Consensus 236 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 315 (448)
+.+.+.+..+..+++. +.++
T Consensus 277 -----------------------------------------------------------~~~~~~~~a~~~~l~~-~~~~ 296 (412)
T 2x5d_A 277 -----------------------------------------------------------GTFTPLQVAAIAALEG-DQQC 296 (412)
T ss_dssp -----------------------------------------------------------CCCHHHHHHHHHHHHS-CSHH
T ss_pred -----------------------------------------------------------CCCHHHHHHHHHHHhC-CHHH
Confidence 0001111122222332 2345
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHh-CCcEEEE
Q psy14299 316 FRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVL-GGTLMIG 394 (448)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~-~g~~~~~ 394 (448)
++++.++..++++++.+.|+++ |++++ ++..+.+.+...|.++.. ....++.+.|.+ +| +.+.
T Consensus 297 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~g~~~~~~~~~~~~~------------~~~~~~~~~l~~~~g-i~v~ 360 (412)
T 2x5d_A 297 VRDIARQYQQRRDVLVKGLREA-GWMVE--NPKASMYVWAKIPEPYAH------------LGSLEFAKKLLQDAK-VSVS 360 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TCCCC--CCSBSSEEEEECCTTTGG------------GCHHHHHHHHHHHHC-EECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCEec--CCCeeeEEEEEcCCccCC------------CCHHHHHHHHHHHCC-EEEe
Confidence 7778888899999999999988 88764 344454433222222200 012367888865 58 5555
Q ss_pred eeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 395 YQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 395 ~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
++...+...++++|+++. . ++++++++++.|+++.+++.
T Consensus 361 ~g~~f~~~~~~~iRis~~--~--~~~~l~~~l~~l~~~l~~~~ 399 (412)
T 2x5d_A 361 PGIGFGDYGDDHVRFALI--E--NRDRLRQAVRGIKAMFRADG 399 (412)
T ss_dssp EGGGGCGGGTTEEEEECC--S--CHHHHHHHHHHHHHHHHHTT
T ss_pred CchhhCCCCCCeEEEEec--C--CHHHHHHHHHHHHHHHHhcC
Confidence 443322222479999994 3 89999999999999987654
No 109
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.85 E-value=8.6e-20 Score=185.40 Aligned_cols=289 Identities=13% Similarity=0.095 Sum_probs=176.8
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH-HHHHHH--HhCCCCCcEEEEecC-CCCCcCHH
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS-MLKAAH--WLGIGMDNVIRVKTN-ERGQMICS 81 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s-~~~~~~--~~g~~~~~v~~v~~~-~~g~id~e 81 (448)
++++|||+++..++.++.. +++.|+++..+|.+ +...+. ..|.+. .+..++.+ +++.+|++
T Consensus 98 v~~~~Gs~a~~~al~~~~~--------------~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~d~~ 162 (425)
T 3ecd_A 98 VQPHSGAQANGAVMLALAK--------------PGDTVLGMSLDAGGHLTHGAKPALSGKWF-NALQYGVSRDTMLIDYD 162 (425)
T ss_dssp CCCSSHHHHHHHHHHHHCC--------------TTCEEEEECC------------------C-EEEEECCCTTTSSCCHH
T ss_pred eecCchHHHHHHHHHHccC--------------CCCEEEEcccccccceecchhhhhcccce-eeeecCCCcccCccCHH
Confidence 4599999999888776632 66789999999988 323333 334321 34455555 34789999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+|++++.+. ++++|+++++.+ |...++++|.++|++||+++++|++|+.+.......... +..+|+++.+
T Consensus 163 ~l~~~i~~~-----~~~~v~~~~~~~--~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~---~~~~di~~~s 232 (425)
T 3ecd_A 163 QVEALAQQH-----KPSLIIAGFSAY--PRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANP---VEHAHVVTST 232 (425)
T ss_dssp HHHHHHHHH-----CCSEEEEECSCC--CSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCG---GGTCSEEEEE
T ss_pred HHHHHHhhc-----CCcEEEEccccC--CCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCc---hhcCcEEEec
Confidence 999999752 467888876554 789999999999999999999999988776543322111 1236899999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+||++++|. .|+++.+++.+...... ...... ..+ ..
T Consensus 233 ~sK~l~g~~-~g~~~~~~~~~~~~~~~----~~~~~~--------------~~~-~~----------------------- 269 (425)
T 3ecd_A 233 THKTLRGPR-GGFVLTNDEEIAKKINS----AVFPGL--------------QGG-PL----------------------- 269 (425)
T ss_dssp SSGGGCCCS-CEEEEESCHHHHHHHHH----HHC-------------------C-CC-----------------------
T ss_pred CCcccCCCC-cEEEEeCCHHHHHHHHh----hhCccc--------------cCC-cc-----------------------
Confidence 999998886 47777654433322211 000000 000 00
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
...+.++..++.....++++++.+
T Consensus 270 --------------------------------------------------------~~~~~a~~~a~~~~~~~~~~~~~~ 293 (425)
T 3ecd_A 270 --------------------------------------------------------MHVIAGKAVAFGEALTDDFKTYID 293 (425)
T ss_dssp --------------------------------------------------------HHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred --------------------------------------------------------HHHHHHHHHHHHHHHHHhHHHHHH
Confidence 001112223344444566778888
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeccC-CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCC
Q psy14299 322 NAVDCSRYFLSQISQRPGFRLVIPE-FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQH 400 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~pg~~l~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g 400 (448)
+..++++++.+.|.+. |++++ .+ .....+.+.+.+.+.. ...+.+.|.++| +.+......+
T Consensus 294 ~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~g-i~v~~~~~p~ 355 (425)
T 3ecd_A 294 RVLANAQALGDVLKAG-GVDLV-TGGTDNHLLLVDLRPKGLK---------------GAQVEQALERAG-ITCNKNGIPF 355 (425)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEG-GGSCSSSEEEEECGGGTCC---------------HHHHHHHHHHTT-EECEECCCTT
T ss_pred HHHHHHHHHHHHHHhC-CCeec-cCCCCceEEEEEeCCCCCC---------------HHHHHHHHHHcC-CEecccccCC
Confidence 9999999999999995 89886 33 2444555544322221 236777888888 4444221111
Q ss_pred ----cccccEEEEEecC--CCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 401 ----RNLHNFFRLVTTC--HPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 401 ----~~~~~~lRis~~~--~~~~t~edid~l~~al~~~~~~~ 436 (448)
...++.+|+++.. +...+++|+++++++|+++.++.
T Consensus 356 ~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 356 DPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp CSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 1123589999520 23445999999999999988765
No 110
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.85 E-value=1.5e-19 Score=181.24 Aligned_cols=280 Identities=13% Similarity=0.035 Sum_probs=185.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|||+++..++.+... +++.|+++...|.++...++..|. +++.+|.+++..+|+++|
T Consensus 89 ~v~~~~g~~~a~~~~~~~l~~--------------~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~d~~~l 151 (376)
T 2dou_A 89 EALALIGSQEGLAHLLLALTE--------------PEDLLLLPEVAYPSYFGAARVASL---RTFLIPLREDGLADLKAV 151 (376)
T ss_dssp SEEEESSHHHHHHHHHHHHCC--------------TTCEEEEESSCCHHHHHHHHHTTC---EEEEECBCTTSSBCGGGS
T ss_pred cEEEcCCcHHHHHHHHHHhcC--------------CCCEEEECCCCcHhHHHHHHHcCC---EEEEeeCCCCCCCCHHHH
Confidence 689999999999888876533 566788899999999999999888 788888844557899999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchh-hhhcCCCCccEEE
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYS-FVLKGINRANSVS 159 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~-~~~~~~~~aD~~~ 159 (448)
++++.+ ++++|++++++|++|.+.| +++|.++|++||+++++|++|+.+........ ....+....++++
T Consensus 152 ~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 225 (376)
T 2dou_A 152 PEGVWR------EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVEL 225 (376)
T ss_dssp CHHHHH------HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEE
T ss_pred HHhhcc------CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEE
Confidence 999964 3789999999999999876 68899999999999999999987543211000 0010111346888
Q ss_pred ECCccccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 160 WNPHKMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 160 ~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
.+++|+++.|. .+|+++.++ ++..........+-.
T Consensus 226 ~s~sK~~~~~G~r~G~~~~~~-~~~~~l~~~~~~~~~------------------------------------------- 261 (376)
T 2dou_A 226 FSLSKSYNLAGFRLGFALGSE-EALARLERVKGVIDF------------------------------------------- 261 (376)
T ss_dssp EEHHHHHTCGGGCCEEEEECH-HHHHHHHHHHHHHCC-------------------------------------------
T ss_pred ecchhhcCChhheeEEEecCH-HHHHHHHHHHHhccc-------------------------------------------
Confidence 89999997543 468877643 333322110000000
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
+.+.+.+..+..+++. ...++++
T Consensus 262 --------------------------------------------------------~~~~~~~~a~~~~l~~-~~~~~~~ 284 (376)
T 2dou_A 262 --------------------------------------------------------NQYAGVLRMGVEALKT-PKEVVRG 284 (376)
T ss_dssp --------------------------------------------------------CSCHHHHHHHHHHHTS-CHHHHHH
T ss_pred --------------------------------------------------------CCCHHHHHHHHHHHhC-cHHHHHH
Confidence 0000011111122221 1235667
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEE-EEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeee
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNIC-FWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQP 397 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 397 (448)
+.++..++++++.+.|+++ +++. ++..+.+. +.+ |.+.+ ..++.+.|.++| +.+.++.
T Consensus 285 ~~~~~~~~~~~l~~~L~~~--~~~~--~~~~~~~~~~~~-~~~~~---------------~~~~~~~l~~~g-i~v~~g~ 343 (376)
T 2dou_A 285 YARVYRERALGMAEALKGV--LSLL--PPRATMYLWGRL-PEGVD---------------DLEFGLRLVERG-VALAPGR 343 (376)
T ss_dssp HHHHHHHHHHHHHHHHTTT--SEEC--CCCBSSEEEEEC-CTTCC---------------HHHHHHHHHHTT-EECEEGG
T ss_pred HHHHHHHHHHHHHHHHHHh--cCcc--CCCeeEEEEEEC-CCCCC---------------HHHHHHHHHHCC-EEEcCch
Confidence 7788889999999999987 7764 34445444 333 22221 236888999998 5555443
Q ss_pred cCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy14299 398 LQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELR 432 (448)
Q Consensus 398 ~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~ 432 (448)
..+...++++|+++. . ++++++++++.|+++
T Consensus 344 ~f~~~~~~~~Ris~~--~--~~~~i~~~l~~l~~~ 374 (376)
T 2dou_A 344 GFGPGGKGFVRIALV--R--PLEELLEAAKRIREA 374 (376)
T ss_dssp GGCGGGTTEEEEECC--S--CHHHHHHHHHHHHHT
T ss_pred hhCCCCCCeEEEEec--C--CHHHHHHHHHHHHHH
Confidence 322212479999994 2 789999999998865
No 111
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.85 E-value=2.2e-19 Score=181.41 Aligned_cols=289 Identities=11% Similarity=0.053 Sum_probs=186.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.+++|+|+|+++..++.+... +++.|+++...|.++...++..|. +++.+|.++++ +|+++|
T Consensus 93 ~v~~~~g~~~al~~~~~~~~~--------------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~-~d~~~l 154 (397)
T 2zyj_A 93 EVLITTGSQQALDLVGKVFLD--------------EGSPVLLEAPSYMGAIQAFRLQGP---RFLTVPAGEEG-PDLDAL 154 (397)
T ss_dssp GEEEESHHHHHHHHHHHHHCC--------------TTCEEEEEESCCHHHHHHHHTTCC---EEEEEEEETTE-ECHHHH
T ss_pred hEEEeccHHHHHHHHHHHhCC--------------CCCEEEEeCCCcHHHHHHHHHcCC---EEEecCcCCCC-CCHHHH
Confidence 578999999999888776533 556788888999999999998887 78888887665 999999
Q ss_pred HHHHHHhhhcCCCcEEE-EEeccCCccccccCHH---HHHHHHHHcCCEEEEeccccccccccc----chhhhhcCCCCc
Q psy14299 84 EQTIQTSLAEKKIPLFV-NATAGTTVLGAFDPLD---EIATVCEKYDLWMHVDACWGGSLIFSE----KYSFVLKGINRA 155 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lV-v~~~~~t~tG~~~~l~---~I~~ia~~~g~~l~VD~A~~~~~~~~~----~~~~~~~~~~~a 155 (448)
++++++ .++++| ++.+++|++|.+.|.+ +|.++|++||+++++|++|+.+..... ............
T Consensus 155 ~~~l~~-----~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~ 229 (397)
T 2zyj_A 155 EEVLKR-----ERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPG 229 (397)
T ss_dssp HHHHHH-----CCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCC
T ss_pred HHHHhh-----cCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCe
Confidence 999975 135676 5688999999988754 899999999999999999987553211 011100000012
Q ss_pred cEEEECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHH
Q psy14299 156 NSVSWNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 234 (448)
Q Consensus 156 D~~~~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g 234 (448)
.+++.++||+++ | ..+|++++++ ++..........+.. +
T Consensus 230 ~i~~~s~sK~~~-~G~r~G~~~~~~-~~~~~l~~~~~~~~~-----------------------------------~--- 269 (397)
T 2zyj_A 230 VIYLGSFSKVLS-PGLRVAFAVAHP-EALQKLVQAKQGADL-----------------------------------H--- 269 (397)
T ss_dssp EEEEEESTTTTC-GGGCCEEEECCH-HHHHHHHHHHHHHHS-----------------------------------S---
T ss_pred EEEEeccccccc-ccceeEEEecCH-HHHHHHHHHHHhhcC-----------------------------------C---
Confidence 377889999998 5 4578888753 333222110000000 0
Q ss_pred HHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc
Q psy14299 235 FRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 314 (448)
Q Consensus 235 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (448)
.+.+.+..+..+++....+
T Consensus 270 -------------------------------------------------------------~~~~~~~a~~~~l~~~~~~ 288 (397)
T 2zyj_A 270 -------------------------------------------------------------TPMLNQMLVHELLKEGFSE 288 (397)
T ss_dssp -------------------------------------------------------------CCHHHHHHHHHHHTTTHHH
T ss_pred -------------------------------------------------------------CCHHHHHHHHHHHHhCCHH
Confidence 0000011111111110002
Q ss_pred cHHHHHHHHHHHHHHHHHHhhc-CC-CeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEE
Q psy14299 315 GFRHFVDNAVDCSRYFLSQISQ-RP-GFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLM 392 (448)
Q Consensus 315 G~~~~~~~~~~l~~~~~~~L~~-~p-g~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~ 392 (448)
.++++.++..++++++.+.|++ +| |++++ .+.....+.+.+ +.+.+ ..++.+.|.++| +.
T Consensus 289 ~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~-~~~~g~~~~~~~-~~~~~---------------~~~~~~~l~~~g-i~ 350 (397)
T 2zyj_A 289 RLERVRRVYREKAQAMLHALDREVPKEVRYT-RPKGGMFVWMEL-PKGLS---------------AEGLFRRALEEN-VA 350 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCTTSEEC-CCSBSSEEEEEC-STTCC---------------HHHHHHHHHHTT-EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCeEEc-cCCccEEEEEEc-CCCCC---------------HHHHHHHHHHCC-CE
Confidence 4566777788889999999987 57 68875 333333333433 22221 237888999998 55
Q ss_pred EEeeecCCc--ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 393 IGYQPLQHR--NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 393 ~~~~~~~g~--~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
+.++...+. ..++++|+++. .. +++|++++++.|+++.+++.
T Consensus 351 v~~g~~f~~~~~~~~~iRis~~--~~-~~~~i~~~~~~l~~~l~~~~ 394 (397)
T 2zyj_A 351 FVPGGPFFANGGGENTLRLSYA--TL-DREGIAEGVRRLGRALKGLL 394 (397)
T ss_dssp EEESGGGCTTSCCTTEEEEECS--SS-CHHHHHHHHHHHHHHHHHHH
T ss_pred EechHHhcCCCCCCCeEEEEcC--CC-CHHHHHHHHHHHHHHHHHHH
Confidence 554332211 12379999995 33 89999999999999887653
No 112
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.84 E-value=6.9e-20 Score=185.78 Aligned_cols=289 Identities=13% Similarity=0.097 Sum_probs=178.7
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHH---HHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLK---AAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~---~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
+++++||+++..++.++.+ +++.|+++..+|.++.. .....|.+. .+..++.++++.+|+++
T Consensus 91 i~~~sGt~a~~~~~~~~~~--------------~gd~vl~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~d~~~ 155 (417)
T 3n0l_A 91 VQPNSGSQANQGVYAALIN--------------PGDKILGMDLSHGGHLTHGAKVSSSGKMY-ESCFYGVELDGRIDYEK 155 (417)
T ss_dssp CCCSSHHHHHHHHHHHHSC--------------TTCEEEEECC----------------CCS-EEEEECCCTTSSCCHHH
T ss_pred eEeccHHHHHHHHHHHhcC--------------CCCEEEecccccccccchhhhhhhhccee-eeEeccCCCCCCcCHHH
Confidence 4556669999988877633 66788999999987655 333444422 35666777778899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
|++++++. ++++|+++++++ |...|+++|.++|++||+++++|++|+.+.......... +..+|+++.++
T Consensus 156 l~~~i~~~-----~~~~v~~~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~---~~~~di~~~s~ 225 (417)
T 3n0l_A 156 VREIAKKE-----KPKLIVCGASAY--ARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSP---FPYAHVVSSTT 225 (417)
T ss_dssp HHHHHHHH-----CCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCC---TTTCSEEEEES
T ss_pred HHHHHHhc-----CCeEEEECCccc--CccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCc---cccceEEEeeC
Confidence 99999742 477888777664 999999999999999999999999987666533221111 12469999999
Q ss_pred ccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 163 HKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
||++++|.+ |+++.+++.+............ ..+..
T Consensus 226 sK~l~g~~~-G~~~~~~~~~~~~~~~~~~~~~------------------~~~~~------------------------- 261 (417)
T 3n0l_A 226 HKTLRGPRG-GIIMTNDEELAKKINSAIFPGI------------------QGGPL------------------------- 261 (417)
T ss_dssp STTTCSCSC-EEEEESCHHHHHHHHHHHTTTT------------------CSSCC-------------------------
T ss_pred ccccCCCCe-eEEEECCHHHHHHHhhhhCCcc------------------cCCcH-------------------------
Confidence 999988875 8877764444333211000000 00000
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 322 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 322 (448)
...+.++..++......+++++.++
T Consensus 262 -------------------------------------------------------~~~~aa~~~a~~~~~~~~~~~~~~~ 286 (417)
T 3n0l_A 262 -------------------------------------------------------MHVIAAKAVGFKFNLSDEWKVYAKQ 286 (417)
T ss_dssp -------------------------------------------------------HHHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred -------------------------------------------------------HHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 0001112233334344567788888
Q ss_pred HHHHHHHHHHHhhcCCCeEEeccC-CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCC-
Q psy14299 323 AVDCSRYFLSQISQRPGFRLVIPE-FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQH- 400 (448)
Q Consensus 323 ~~~l~~~~~~~L~~~pg~~l~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g- 400 (448)
..++++++.+.|.+ +|++++ .. ...+.+.+.+.+.++. ...+.+.|.++| +.+.+.....
T Consensus 287 ~~~~~~~l~~~L~~-~g~~~~-~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~g-i~v~~~~~~~~ 348 (417)
T 3n0l_A 287 VRTNAQVLANVLMD-RKFKLV-SDGTDNHLVLMSFLDREFS---------------GKDADLALGNAG-ITANKNTVPGE 348 (417)
T ss_dssp HHHHHHHHHHHHHH-TTCEEG-GGSCSSSEEEEECTTSSSC---------------HHHHHHHHHHTT-EECEECCCTTC
T ss_pred HHHHHHHHHHHHHh-CCceec-cCCCCceEEEEEcccCCCC---------------HHHHHHHHHHcC-eEEeccccCCC
Confidence 99999999999999 599986 32 2334444443332222 236777888888 4444322111
Q ss_pred ---cccccEEEEEecC--CCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 401 ---RNLHNFFRLVTTC--HPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 401 ---~~~~~~lRis~~~--~~~~t~edid~l~~al~~~~~~~ 436 (448)
......+|+++.. ....+++|+++++++|+++.++.
T Consensus 349 ~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 389 (417)
T 3n0l_A 349 IRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDV 389 (417)
T ss_dssp CSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred CcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 1112579999731 12357899999999999988654
No 113
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.84 E-value=8.1e-20 Score=183.98 Aligned_cols=149 Identities=15% Similarity=0.143 Sum_probs=116.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-CCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-GQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-g~id~e~ 82 (448)
.+++|+|||+++..++.++.. .+++.|+++..+|.++..+++..|. +++.++.+++ +.+|+++
T Consensus 56 ~~~~~~~gt~al~~~~~~~~~-------------~~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~d~~~ 119 (393)
T 1mdo_A 56 YAVAVSSATAGMHIALMALGI-------------GEGDEVITPSMTWVSTLNMIVLLGA---NPVMVDVDRDTLMVTPEH 119 (393)
T ss_dssp EEEEESCHHHHHHHHHHHTTC-------------CTTCEEEEESSSCHHHHHHHHHTTC---EEEEECBCTTTCCBCHHH
T ss_pred cEEEecChHHHHHHHHHHcCC-------------CCCCEEEeCCCccHhHHHHHHHCCC---EEEEEeccCCcCCCCHHH
Confidence 478999999999988876521 1567899999999999999999898 7889998765 6899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
|++++++ ++++|+++ +++|.+.|+++|.++|++||+++++|++|+.+..+... . + +. .|+++.|+
T Consensus 120 l~~~l~~------~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~-~--~-~~--~d~~~~S~ 184 (393)
T 1mdo_A 120 IEAAITP------QTKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGR-H--I-GA--RGTAIFSF 184 (393)
T ss_dssp HHHHCCT------TEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTE-E--T-TS--SSEEEEEC
T ss_pred HHHhcCC------CceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECCe-e--c-CC--CCeEEEeC
Confidence 9999854 46777765 37999999999999999999999999999976543211 1 1 11 68999999
Q ss_pred c--cccCCCCceEEEEEeccchhh
Q psy14299 163 H--KMLGAPLQCSILLIKEKGLLH 184 (448)
Q Consensus 163 h--K~l~~P~g~G~l~vr~~~~~~ 184 (448)
| |+++++ ..|+++.+++++..
T Consensus 185 ~k~K~l~~~-~~g~~~~~~~~~~~ 207 (393)
T 1mdo_A 185 HAIKNITCA-EGGIVVTDNPQFAD 207 (393)
T ss_dssp CTTSSSCSS-SCEEEEESCHHHHH
T ss_pred CCCCccccc-cceEEEeCCHHHHH
Confidence 9 999764 46666665444433
No 114
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.84 E-value=1.6e-19 Score=184.56 Aligned_cols=294 Identities=12% Similarity=0.025 Sum_probs=190.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|||+++..++.+... +++.|+++...|.++...++..|. +++.+|.++++ +|+++|
T Consensus 111 ~v~~t~G~~~al~~~~~~l~~--------------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~-~d~~~l 172 (425)
T 1vp4_A 111 NLIFTVGSQQALDLIGKLFLD--------------DESYCVLDDPAYLGAINAFRQYLA---NFVVVPLEDDG-MDLNVL 172 (425)
T ss_dssp GEEEEEHHHHHHHHHHHHHCC--------------TTCEEEEEESCCHHHHHHHHTTTC---EEEEEEEETTE-ECHHHH
T ss_pred cEEEeccHHHHHHHHHHHhCC--------------CCCEEEEeCCCcHHHHHHHHHcCC---EEEEeccCCCC-CCHHHH
Confidence 578999999999888776533 567788899999999999998888 78888887765 999999
Q ss_pred HHHHHHhhhc--CCCcEEE-EEeccCCccccccC---HHHHHHHHHHcCCEEEEeccccccccccc---chhhhhcCCCC
Q psy14299 84 EQTIQTSLAE--KKIPLFV-NATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSE---KYSFVLKGINR 154 (448)
Q Consensus 84 e~~l~~~~~~--~~~~~lV-v~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~---~~~~~~~~~~~ 154 (448)
++++++..++ +.++++| ++++++|+||.+.| +++|.++|++||+++++|++|+.+..... .... +. ...
T Consensus 173 ~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~-~~~ 250 (425)
T 1vp4_A 173 ERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFK-IG-GPE 250 (425)
T ss_dssp HHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHH-HH-CTT
T ss_pred HHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHH-hC-CCC
Confidence 9999763211 1247787 57899999998876 67899999999999999999987543111 1110 11 112
Q ss_pred ccEEEECCccccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChH
Q psy14299 155 ANSVSWNPHKMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 233 (448)
Q Consensus 155 aD~~~~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 233 (448)
.++++.+++|+++ |. .+|++++++ ++..........+-.
T Consensus 251 ~~i~~~s~sK~~~-~G~r~G~~~~~~-~~~~~l~~~~~~~~~-------------------------------------- 290 (425)
T 1vp4_A 251 RVVLLNTFSKVLA-PGLRIGMVAGSK-EFIRKIVQAKQSADL-------------------------------------- 290 (425)
T ss_dssp TEEEEEESTTTTC-GGGCEEEEECCH-HHHHHHHHHHHHHHS--------------------------------------
T ss_pred CEEEEeccccccc-cccceEEEeeCH-HHHHHHHHHhhhhcC--------------------------------------
Confidence 4688889999998 42 368887753 333322110000000
Q ss_pred HHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHh-c
Q psy14299 234 GFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKAR-G 312 (448)
Q Consensus 234 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 312 (448)
+.+.+.+..+..+++.. -
T Consensus 291 -------------------------------------------------------------~~~~~~~~a~~~~l~~~~~ 309 (425)
T 1vp4_A 291 -------------------------------------------------------------CSPAITHRLAARYLERYDL 309 (425)
T ss_dssp -------------------------------------------------------------SCCHHHHHHHHHHHHHSCH
T ss_pred -------------------------------------------------------------CCCHHHHHHHHHHHhcCCH
Confidence 00001111111222221 0
Q ss_pred CccHHHHHHHHHHHHHHHHHHhhcC-C---CeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC
Q psy14299 313 NLGFRHFVDNAVDCSRYFLSQISQR-P---GFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG 388 (448)
Q Consensus 313 ~~G~~~~~~~~~~l~~~~~~~L~~~-p---g~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~ 388 (448)
...++++.++..++++++.+.|+++ | |++++ .+.....+.+.+ |.+.+ ..++.+.|.++
T Consensus 310 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~-~~~~g~~~~~~~-~~~~~---------------~~~l~~~l~~~ 372 (425)
T 1vp4_A 310 LEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWV-KSEGGLFIWLTL-PEGFD---------------TWEMFEYAKRK 372 (425)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEEC-CCSBSSEEEEEC-CTTCC---------------TTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEe-cCCccEEEEEEc-CCCCC---------------HHHHHHHHHHC
Confidence 2345667777888899999999874 5 68875 333333334433 32221 12577888888
Q ss_pred CcEEEEeeecCCc--ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhHHh
Q psy14299 389 GTLMIGYQPLQHR--NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVDLE 439 (448)
Q Consensus 389 g~~~~~~~~~~g~--~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~~~ 439 (448)
| +.+.++...+. ..++++|+++. . .+++|+++++++|+++.+++.++
T Consensus 373 g-i~v~~g~~f~~~~~~~~~iRis~~--~-~~~e~i~~~l~~l~~~l~~~~~~ 421 (425)
T 1vp4_A 373 K-VFYVPGRVFKVYDEPSPSMRLSFC--L-PPDEKIVEGIKRLREVVLEYGKE 421 (425)
T ss_dssp T-EECEEGGGGCTTCCCCSEEEEECS--S-SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-CEEECchhhcCCCCCCCeEEEEeC--C-CCHHHHHHHHHHHHHHHHHHHhh
Confidence 8 55554432211 12379999995 3 38999999999999998876544
No 115
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.84 E-value=9.1e-20 Score=184.92 Aligned_cols=284 Identities=13% Similarity=0.129 Sum_probs=178.2
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHH-HH--HHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLK-AA--HWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~-~~--~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
+++++||++|..++.+... +++.|+++..+|.+... +. ...|.+. ....++.+.++.+|+++
T Consensus 96 v~~~sGs~a~~~a~~~~~~--------------~gd~v~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~d~~~ 160 (420)
T 3gbx_A 96 VQPHSGSQANFAVYTALLQ--------------PGDTVLGMNLAQGGHLTHGSPVNFSGKLY-NIVPYGIDESGKIDYDE 160 (420)
T ss_dssp CCCSSHHHHHHHHHHHHCC--------------TTCEEEEEEEC------------CHHHHS-EEEEEEECTTCSCCHHH
T ss_pred eEecCcHHHHHHHHHHhcC--------------CCCEEEecchhhcceeccchhhhhcccce-eEEeccCCccCCcCHHH
Confidence 4467779998888766533 66788889899988442 21 2222211 35566777788999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
|++++++. ++++|+++++++ |...|+++|.++|++||+++++|++|+.+......... .+..+|+++.++
T Consensus 161 l~~~i~~~-----~~~~v~~~~~~~--~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~---~~~~~di~~~s~ 230 (420)
T 3gbx_A 161 MAKLAKEH-----KPKMIIGGFSAY--SGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPN---PVPHAHVVTTTT 230 (420)
T ss_dssp HHHHHHHH-----CCSEEEECCTTC--CSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCC---STTTSSEEEEES
T ss_pred HHHHHHhc-----CCeEEEEecCcc--CCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCc---ccccCCEEEeec
Confidence 99999762 467888876555 56889999999999999999999998876553222111 122479999999
Q ss_pred ccccCCCCceEEEEEecc--chhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 163 HKMLGAPLQCSILLIKEK--GLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~--~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
||++++|.| |+++.++. .+...... +..... ..+ .
T Consensus 231 sK~~~g~~g-g~~~~~~~~~~~~~~~~~----~~~~~~--------------~~~-~----------------------- 267 (420)
T 3gbx_A 231 HKTLAGPRG-GLILAKGGDEELYKKLNS----AVFPSA--------------QGG-P----------------------- 267 (420)
T ss_dssp SGGGCSCSC-EEEEESSCCHHHHHHHHH----HHC------------------CC-C-----------------------
T ss_pred ccCCCCCCc-eEEEEcCCcHHHHHHhhh----hcCCCC--------------CCC-c-----------------------
Confidence 999988886 77666541 22222110 000000 000 0
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
....+.++..++.....++++++.
T Consensus 268 --------------------------------------------------------~~~~~~a~~~a~~~~~~~~~~~~~ 291 (420)
T 3gbx_A 268 --------------------------------------------------------LMHVIAGKAVALKEAMEPEFKVYQ 291 (420)
T ss_dssp --------------------------------------------------------CHHHHHHHHHHHHHTTSHHHHHHH
T ss_pred --------------------------------------------------------chhHHHHHHHHHHHHHhHhHHHHH
Confidence 001112223334444456778888
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEeccC-CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEe----
Q psy14299 321 DNAVDCSRYFLSQISQRPGFRLVIPE-FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGY---- 395 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~~pg~~l~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~---- 395 (448)
++..++++++.+.|.+. |++++ .+ ...+.+.+.+.+.+.. ...+.+.|.++| +.+.+
T Consensus 292 ~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~g-i~v~~~~~~ 353 (420)
T 3gbx_A 292 QQVAKNAKAMVEVFLNR-GYKVV-SGGTENHLFLLDLVDKNLT---------------GKEADAALGRAN-ITVNKNSVP 353 (420)
T ss_dssp HHHHHHHHHHHHHHHHT-TCEEG-GGSCSSSEEEEECGGGTCC---------------HHHHHHHHHHTT-EECEEECCT
T ss_pred HHHHHHHHHHHHHHHhc-CCeec-cCCCCCeEEEEEcCCCCCC---------------HHHHHHHHHHCC-cEeccccCC
Confidence 99999999999999985 99986 32 3344555544322221 236777888888 44444
Q ss_pred ---eecCCcccccEEEEEecCCCC----CCHHHHHHHHHHHHHHHHHh
Q psy14299 396 ---QPLQHRNLHNFFRLVTTCHPA----SSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 396 ---~~~~g~~~~~~lRis~~~~~~----~t~edid~l~~al~~~~~~~ 436 (448)
....+. ..+|+++. .. .+++|+++++++|+++.++.
T Consensus 354 ~~~~~~~~~---~~iRi~~~--~~~~~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 354 NDPKSPFVT---SGIRIGSP--AVTRRGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp TCSSCTTTC---SEEEEECH--HHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred CCccccCCC---cceEEecc--hhcccCCCHHHHHHHHHHHHHHHhCc
Confidence 222222 56999984 23 46899999999999987653
No 116
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.84 E-value=5.5e-20 Score=186.83 Aligned_cols=284 Identities=9% Similarity=-0.035 Sum_probs=188.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-CCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-GQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-g~id~e~ 82 (448)
..++|+|+|+++..++.+... +++.|+++...|.++...++..|. +++.+|.+++ ..+|+++
T Consensus 111 ~v~~t~G~~~al~~~~~~l~~--------------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~d~~~ 173 (404)
T 2o1b_A 111 EVCILYGTKNGLVAVPTCVIN--------------PGDYVLLPDPGYTDYLAGVLLADG---KPVPLNLEPPHYLPDWSK 173 (404)
T ss_dssp SEEEESSHHHHHHHHHHHHCC--------------TTCEEEEEESCCSSHHHHHHHTTC---EEEEEECCTTTCCCCGGG
T ss_pred cEEEcCCcHHHHHHHHHHhcC--------------CCCEEEEcCCCchhHHHHHHHCCC---EEEEeccCcccCcCCHHH
Confidence 689999999999888877533 556788888999999999998888 7888998763 4689999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchh-hhhcCCCCccEE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYS-FVLKGINRANSV 158 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~-~~~~~~~~aD~~ 158 (448)
|++++++ ++++|++++++|++|.+.| +++|.++|++||+++++|++|+.+........ ....+....|++
T Consensus 174 l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~ 247 (404)
T 2o1b_A 174 VDSQIID------KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIE 247 (404)
T ss_dssp SCHHHHH------HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEE
T ss_pred HHHhhcc------CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEE
Confidence 9999964 3788999999999999875 78899999999999999999987543111000 001001134688
Q ss_pred EECCccccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHH
Q psy14299 159 SWNPHKMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 237 (448)
Q Consensus 159 ~~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 237 (448)
+.++||+++.|. .+|+++.++ ++..........+..
T Consensus 248 ~~s~sK~~g~~G~r~G~~~~~~-~~~~~l~~~~~~~~~------------------------------------------ 284 (404)
T 2o1b_A 248 IYSLSKGYNMSGFRVGFAVGNK-DMIQALKKYQTHTNA------------------------------------------ 284 (404)
T ss_dssp EEESTTTTTCGGGCCEEEEECH-HHHHHHHHHHHHHCC------------------------------------------
T ss_pred EEecchhccCchhheEeEecCH-HHHHHHHHHHhhccC------------------------------------------
Confidence 999999997553 468877643 333322110000000
Q ss_pred HHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHH
Q psy14299 238 FVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 317 (448)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (448)
+.+.+.+..+..+++.. ..+++
T Consensus 285 ---------------------------------------------------------~~~~~~~~a~~~~l~~~-~~~~~ 306 (404)
T 2o1b_A 285 ---------------------------------------------------------GMFGALQDAAIYALNHY-DDFLE 306 (404)
T ss_dssp ---------------------------------------------------------CCCHHHHHHHHHHHHHC-HHHHH
T ss_pred ---------------------------------------------------------CCCHHHHHHHHHHHhcC-HHHHH
Confidence 00001111112222221 34566
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEE-EEeeccCCCccccchhhhhhhhhhhHHHHHHHH-hCCcEEEEe
Q psy14299 318 HFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNIC-FWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV-LGGTLMIGY 395 (448)
Q Consensus 318 ~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g~~~~~~ 395 (448)
++.++..++++++.+.|+++ |+++. ++..+.+. +.+ |.+.+ ..++.+.|. ++| +.+.+
T Consensus 307 ~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~g~~~~~~~-~~~~~---------------~~~l~~~l~~~~g-i~v~~ 366 (404)
T 2o1b_A 307 EQSNVFKTRRDRFEAMLAKA-DLPFV--HAKGGIYVWLET-PPGYD---------------SEQFEQFLVQEKS-ILVAP 366 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCCEE--CCCBSSEEEEEC-CTTCC---------------HHHHHHHHHHHHC-EECEE
T ss_pred HHHHHHHHHHHHHHHHHHhc-CCeec--CCCcceEEEEeC-CCCCC---------------HHHHHHHHHHHCC-EEEeC
Confidence 77888888999999999998 88875 34445433 332 22221 136778877 468 55554
Q ss_pred eecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 396 QPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 396 ~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
+...+...++++|+++. . ++++++++++.|+++.++
T Consensus 367 g~~f~~~~~~~iRis~~--~--~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 367 GKPFGENGNRYVRISLA--L--DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp SGGGCGGGTTEEEEECC--S--CTTHHHHHHHHHHGGGGG
T ss_pred chhhCcCCCCeEEEEEc--C--CHHHHHHHHHHHHHHHHh
Confidence 43222212479999994 2 678999999999877654
No 117
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.84 E-value=5.7e-19 Score=176.34 Aligned_cols=278 Identities=10% Similarity=0.026 Sum_probs=180.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCH-HH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMIC-SF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~-e~ 82 (448)
..++|+|||+++..++.++ + + +.|++....|.++...++..|. +++.+|.+++..+++ ++
T Consensus 78 ~v~~~~g~~~al~~~~~~~--~-------------g-d~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~l~~ 138 (364)
T 1lc5_A 78 WILAGNGETESIFTVASGL--K-------------P-RRAMIVTPGFAEYGRALAQSGC---EIRRWSLREADGWQLTDA 138 (364)
T ss_dssp GEEEESSHHHHHHHHHHHH--C-------------C-SEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGGTTCCCTT
T ss_pred HEEECCCHHHHHHHHHHHc--C-------------C-CeEEEeCCCcHHHHHHHHHcCC---eEEEEeCCcccccchhHH
Confidence 5789999999998888766 3 3 4577888899999999999888 788899875333443 43
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+.+.+. .++++|++++++|++|.+.| +++|.++|++||+++++|++|+.+........... +....|+++
T Consensus 139 ~~~~~~------~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~i~~ 211 (364)
T 1lc5_A 139 ILEALT------PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPAL-KDNPHIWVL 211 (364)
T ss_dssp HHHHCC------TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGC-TTCTTEEEE
T ss_pred HHHhcc------CCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHh-ccCCCEEEE
Confidence 433331 24778888999999999988 99999999999999999999986543110000001 112357889
Q ss_pred ECCccccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 160 WNPHKMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 160 ~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
.++||+++.|. .+|++++.++++..........+ + ...+..+++..
T Consensus 212 ~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~-----------------~------~~~~~~~~~~~---------- 258 (364)
T 1lc5_A 212 RSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMPW-----------------S------VNALAALAGEV---------- 258 (364)
T ss_dssp EESTTTTTCTTTCCEEEECCCHHHHHHHHHHSCTT-----------------C------SCHHHHHHHHH----------
T ss_pred EECchhhcCCccceEEEEECCHHHHHHHHHhCCCC-----------------C------CCHHHHHHHHH----------
Confidence 99999997553 46888723444433322111000 0 00111111111
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
+++. .+++++
T Consensus 259 --------------------------------------------------------------------~l~~--~~~~~~ 268 (364)
T 1lc5_A 259 --------------------------------------------------------------------ALQD--SAWQQA 268 (364)
T ss_dssp --------------------------------------------------------------------GGGC--HHHHHH
T ss_pred --------------------------------------------------------------------HHhC--cHHHHH
Confidence 1111 134566
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeec
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPL 398 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~ 398 (448)
+.++..++++++.+.|+++||+++. ++..+.+.+.+ +.+ ..++.+.|.++| +.+.++..
T Consensus 269 ~~~~~~~~~~~l~~~L~~~~~~~~~--~~~g~~~~~~~-~~~-----------------~~~l~~~l~~~g-i~v~~g~~ 327 (364)
T 1lc5_A 269 TWHWLREEGARFYQALCQLPLLTVY--PGRANYLLLRC-ERE-----------------DIDLQRRLLTQR-ILIRSCAN 327 (364)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTEEEC--CCSSSEEEEEE-SCT-----------------TCCHHHHHHTTT-EECEECTT
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEC--CCCCeEEEEEC-CCc-----------------HHHHHHHHHHCC-cEEeeCcc
Confidence 7778888899999999999999875 34444444433 211 115778888888 55555432
Q ss_pred CCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 399 QHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 399 ~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
.+...++++|+++. +++|+++++++|+++.+++
T Consensus 328 ~~~~~~~~iRis~~-----~~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 328 YPGLDSRYYRVAIR-----SAAQNERLLAALRNVLTGI 360 (364)
T ss_dssp STTCCTTEEEEECC-----CHHHHHHHHHHHHHHC---
T ss_pred cCCCCCCEEEEEeC-----CHHHHHHHHHHHHHHhhcc
Confidence 21112379999983 6899999999999887654
No 118
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.84 E-value=5.4e-19 Score=178.28 Aligned_cols=154 Identities=14% Similarity=0.148 Sum_probs=113.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-CCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-GQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-g~id~e~ 82 (448)
.++++++||+++..++.+++.. +..++ .+++.|+++..+|.++..+++..|. +++.++++++ +.+|+++
T Consensus 51 ~~i~~~sGt~a~~~al~~~~~~-----~~~~~--~~g~~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~d~~~ 120 (390)
T 3b8x_A 51 YAVMVSSGSTANLLMIAALFFT-----KKPRL--KKGDEIIVPAVSWSTTYYPLQQYGL---RVKFVDIDINTLNIDIES 120 (390)
T ss_dssp EEEEESCHHHHHHHHHHHTTSS-----SSCSC--CTTCEEEEESSSCHHHHHHHHHTTC---EEEEECBCTTTCSBCHHH
T ss_pred cEEEECCHHHHHHHHHHHHHhh-----hhcCC--CCcCEEEECCCCcHHHHHHHHHcCC---EEEEEecCccccCcCHHH
Confidence 4789999999999888776321 00111 2567899999999999999999888 7889999875 8999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC-
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN- 161 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s- 161 (448)
|++++++ ++++|++++ ++|...|+++|.++|++||+++|+|++|+.+... +... . +. ..|..+++
T Consensus 121 l~~~i~~------~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~--~-g~-~~~~~~~s~ 186 (390)
T 3b8x_A 121 LKEAVTD------STKAILTVN---LLGNPNNFDEINKIIGGRDIILLEDNCESMGATF-NNKC--A-GT-FGLMGTFSS 186 (390)
T ss_dssp HHHHCCT------TEEEEEEEC---GGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEE-TTEE--T-TS-SSSEEEEEC
T ss_pred HHHHhCc------CCeEEEEEC---CccChhhHHHHHHHHHHcCCEEEEECcCcccCEE-CCcc--c-cc-ccceEEEEc
Confidence 9999854 477888763 5788999999999999999999999999977654 2111 1 11 13444433
Q ss_pred -CccccCCCCceEEEEEeccch
Q psy14299 162 -PHKMLGAPLQCSILLIKEKGL 182 (448)
Q Consensus 162 -~hK~l~~P~g~G~l~vr~~~~ 182 (448)
+.|.+++|.| |+++.+++.+
T Consensus 187 ~~~k~~~~g~g-G~~~~~~~~l 207 (390)
T 3b8x_A 187 FYSNHIATMEG-GCIVTDDEEI 207 (390)
T ss_dssp CTTSSSCSSSC-EEEEESCHHH
T ss_pred cCCCCCccCCc-eEEEeCCHHH
Confidence 3444555555 7777765443
No 119
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.84 E-value=8.4e-20 Score=186.44 Aligned_cols=152 Identities=11% Similarity=-0.016 Sum_probs=119.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC---------
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--------- 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--------- 74 (448)
.+++|+|||+++..++.++.. +++.|+++...|+++...++..|. +++.+|.++
T Consensus 103 ~v~~~~g~~~a~~~~~~~~~~--------------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~ 165 (429)
T 1yiz_A 103 EVLVTVGAYEALYATIQGHVD--------------EGDEVIIIEPFFDCYEPMVKAAGG---IPRFIPLKPNKTGGTISS 165 (429)
T ss_dssp SEEEESHHHHHHHHHHHHHCC--------------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECBCCCSSSSEEG
T ss_pred CEEEecChHHHHHHHHHHhcC--------------CCCEEEEcCCCchhHHHHHHHcCC---EEEEEeCCcccccccccc
Confidence 589999999999988877643 556788888999999999998888 788888865
Q ss_pred -CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccch-hh-h
Q psy14299 75 -RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKY-SF-V 148 (448)
Q Consensus 75 -~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~-~~-~ 148 (448)
++.+|+++|++++++ ++++|++++++|++|.+.| +++|.++|++||+++++|++|+......... .. .
T Consensus 166 ~~~~~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~ 239 (429)
T 1yiz_A 166 ADWVLDNNELEALFNE------KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICT 239 (429)
T ss_dssp GGCBCCHHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGG
T ss_pred cCcccCHHHHHHHhcc------CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhh
Confidence 357999999999853 5789999999999999875 9999999999999999999998654311100 00 0
Q ss_pred hcCCCCccEEEECCccccCCCCc--eEEEEEec
Q psy14299 149 LKGINRANSVSWNPHKMLGAPLQ--CSILLIKE 179 (448)
Q Consensus 149 ~~~~~~aD~~~~s~hK~l~~P~g--~G~l~vr~ 179 (448)
+.+....|+++.++||+++ +.| +|++++++
T Consensus 240 ~~~~~~~~~~~~s~sK~~~-~~G~r~G~~~~~~ 271 (429)
T 1yiz_A 240 LPGMWERTITIGSAGKTFS-LTGWKIGWAYGPE 271 (429)
T ss_dssp STTTGGGEEEEEEHHHHHT-CGGGCCEEEESCH
T ss_pred ccCCcCceEEEecchhccC-CCCcceEEEEeCH
Confidence 1112247899999999987 445 88888754
No 120
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.83 E-value=8.2e-19 Score=180.95 Aligned_cols=292 Identities=12% Similarity=0.107 Sum_probs=189.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
.+++|+|||+++..++.+..+ +++.|+++...|.++...++..|. +++.+|.++++ +|+++|
T Consensus 142 ~v~~t~G~~~al~~~~~~l~~--------------~Gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~g-~d~~~L 203 (448)
T 3aow_A 142 DIMITSGSQQALDLIGRVFLN--------------PGDIVVVEAPTYLAALQAFNFYEP---QYIQIPLDDEG-MKVEIL 203 (448)
T ss_dssp EEEEESSHHHHHHHHHHHHCC--------------TTCEEEEEESCCHHHHHHHHTTCC---EEEEEEEETTE-ECHHHH
T ss_pred hEEEeCcHHHHHHHHHHHHcC--------------CCCEEEEeCCChHHHHHHHHHcCC---EEEEeccCCCC-CCHHHH
Confidence 578999999999888877643 567889999999999999998888 78899987765 999999
Q ss_pred HHHHHHhhhcCCCcEEE-EEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCC--CCccE
Q psy14299 84 EQTIQTSLAEKKIPLFV-NATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGI--NRANS 157 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lV-v~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~--~~aD~ 157 (448)
+++++.....+.++++| ++..++|++|.+.| +++|.++|++||+++++|++|+...+...... .+..+ ...++
T Consensus 204 ~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~-~~~~~~~~~~vi 282 (448)
T 3aow_A 204 EEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEK-KIKALDNEGRVI 282 (448)
T ss_dssp HHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCC-CTGGGCTTSCEE
T ss_pred HHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCc-CHHhcCCCCCEE
Confidence 99997321122357887 56788999998876 57899999999999999999987654211100 01111 12467
Q ss_pred EEECCccccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHH
Q psy14299 158 VSWNPHKMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFR 236 (448)
Q Consensus 158 ~~~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~ 236 (448)
.+.+++|+++ |. .+|++++++ ++..........+..
T Consensus 283 ~~~S~SK~~~-~GlriG~v~~~~-~l~~~l~~~~~~~~~----------------------------------------- 319 (448)
T 3aow_A 283 YLGTFSKILA-PGFRIGWMVGDP-GIIRKMEIAKQSTDL----------------------------------------- 319 (448)
T ss_dssp EEEESTTTTC-GGGCCEEEEECH-HHHHHHHHHHHHHHS-----------------------------------------
T ss_pred EEccchhhcc-ccccEEEEEeCH-HHHHHHHHHHHHhcC-----------------------------------------
Confidence 8889999997 42 378888754 333322110000000
Q ss_pred HHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHh-cCcc
Q psy14299 237 HFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKAR-GNLG 315 (448)
Q Consensus 237 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G 315 (448)
+.+.+.+..+..+++.. -...
T Consensus 320 ----------------------------------------------------------~~~~~~q~a~~~~L~~~~~~~~ 341 (448)
T 3aow_A 320 ----------------------------------------------------------CTNVFGQVVAWRYVDGGYLEKH 341 (448)
T ss_dssp ----------------------------------------------------------SCCHHHHHHHHHHHHTTHHHHH
T ss_pred ----------------------------------------------------------CCCHHHHHHHHHHHHhCCHHHH
Confidence 00000111111112110 0123
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-CC-CeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEE
Q psy14299 316 FRHFVDNAVDCSRYFLSQISQ-RP-GFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMI 393 (448)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~L~~-~p-g~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~ 393 (448)
++++.++..++++++.+.|++ +| |+++. .|..+.+.+...|.+.+ ..++.+.|.++| +.+
T Consensus 342 ~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~--~p~~g~~~~v~~~~~~~---------------~~~l~~~l~~~g-V~v 403 (448)
T 3aow_A 342 IPEIRKFYKPRRDAMLEALEEFMPEGVKWT--KPEGGMFIWVTLPDGID---------------SKKMLERAIKKG-VAY 403 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCTTCEEC--CCSBSSEEEEECSTTCC---------------HHHHHHHHHHTT-EEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCeEEe--CCCccEEEEEEcCCCCC---------------HHHHHHHHHHCC-cEE
Confidence 455677777889999999987 57 68875 34444444322232221 237888999998 555
Q ss_pred EeeecCCc--ccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 394 GYQPLQHR--NLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 394 ~~~~~~g~--~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
.++...+. ..++++|+++. . .++++++++++.|+++.++.
T Consensus 404 ~pg~~f~~~~~~~~~iRls~~--~-~~~e~i~~~~~~L~~~l~~~ 445 (448)
T 3aow_A 404 VPGEAFYAHRDVKNTMRLNFT--Y-VDEDKIMEGIKRLAETIKEE 445 (448)
T ss_dssp EEGGGGSTTCCCCSEEEEECS--S-SCTHHHHHHHHHHHHHHHHH
T ss_pred EcchhhcCCCCCCCEEEEEeC--C-CCHHHHHHHHHHHHHHHHHH
Confidence 44432211 12379999994 3 48999999999999988654
No 121
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.83 E-value=8.7e-19 Score=174.92 Aligned_cols=272 Identities=12% Similarity=0.085 Sum_probs=179.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCC-eEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPP-LCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~-~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
..++|+|+|+++..++.+.+. ++ +.|+++..+|.++...++..|. +++.+|.++++.+|+++
T Consensus 77 ~v~~~~G~~~ai~~~~~~~~~--------------~g~d~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~ 139 (356)
T 1fg7_A 77 QVLVSRGADEGIELLIRAFCE--------------PGKDAILYCPPTYGMYSVSAETIGV---ECRTVPTLDNWQLDLQG 139 (356)
T ss_dssp GEEEESHHHHHHHHHHHHHCC--------------TTTCEEEECSSSCTHHHHHHHHHTC---EEEECCCCTTSCCCHHH
T ss_pred HEEEcCCHHHHHHHHHHHHhC--------------CCCCEEEEeCCChHHHHHHHHHcCC---EEEEeeCCCCCCCCHHH
Confidence 578999999999888876543 45 6788999999999999999998 78889988778899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHH---HHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIA---TVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~---~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++ ++++|++++++|+||.+.|.+++. ++|+ +|+++++|++|+..... ......... ...++++
T Consensus 140 l~~~i~-------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~-~~~~~~~~~-~~~~i~~ 209 (356)
T 1fg7_A 140 ISDKLD-------GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQ-ASLAGWLAE-YPHLAIL 209 (356)
T ss_dssp HHTSCT-------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGG-GCSGGGTTT-CTTEEEE
T ss_pred HHHHhc-------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCC-CcHHHHHhh-CCCEEEE
Confidence 988874 378999999999999998865554 5555 99999999999865411 111111111 1346888
Q ss_pred ECCccccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHH
Q psy14299 160 WNPHKMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHF 238 (448)
Q Consensus 160 ~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 238 (448)
.+++|+++.|. .+|++++++ ++..........| + ...+...++...+...++
T Consensus 210 ~s~sK~~g~~G~r~G~~~~~~-~~~~~l~~~~~~~-----------------~------~~~~~~~a~~~~l~~~~~--- 262 (356)
T 1fg7_A 210 RTLSKAFALAGLRCGFTLANE-EVINLLMKVIAPY-----------------P------LSTPVADIAAQALSPQGI--- 262 (356)
T ss_dssp EESSSTTCCGGGCCEEEEECH-HHHHHHHHHSCSS-----------------C------SCHHHHHHHHHHTSHHHH---
T ss_pred ecchHhhcCchhhhEEEEeCH-HHHHHHHHhcCCC-----------------C------CCHHHHHHHHHHhcCccH---
Confidence 89999987442 368888744 4433322111111 0 001111111111111110
Q ss_pred HHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHH
Q psy14299 239 VDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRH 318 (448)
Q Consensus 239 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 318 (448)
+.+++
T Consensus 263 ---------------------------------------------------------------------------~~~~~ 267 (356)
T 1fg7_A 263 ---------------------------------------------------------------------------VAMRE 267 (356)
T ss_dssp ---------------------------------------------------------------------------HHHHH
T ss_pred ---------------------------------------------------------------------------HHHHH
Confidence 12456
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEe-ee
Q psy14299 319 FVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGY-QP 397 (448)
Q Consensus 319 ~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~-~~ 397 (448)
+.++..++++++.+.|++++++..+ .++..+.+.+.+ + + ..++.+.|.++| +.+.+ +.
T Consensus 268 ~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~-~---~---------------~~~l~~~L~~~g-I~v~~~g~ 326 (356)
T 1fg7_A 268 RVAQIIAEREYLIAALKEIPCVEQV-FDSETNYILARF-K---A---------------SSAVFKSLWDQG-IILRDQNK 326 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTEEEE-CCCSSSEEEEEE-T---T---------------HHHHHHHHHHTT-EECEECTT
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEE-CCCCCeEEEEEC-C---C---------------HHHHHHHHHHCC-EEEEECCC
Confidence 6777888899999999999764333 344444444432 1 1 136888898888 55554 43
Q ss_pred cCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHH
Q psy14299 398 LQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELR 432 (448)
Q Consensus 398 ~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~ 432 (448)
..+. ++++|+++. +++|+++++++|+++
T Consensus 327 ~~~~--~~~iRis~~-----~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 327 QPSL--SGCLRITVG-----TREESQRVIDALRAE 354 (356)
T ss_dssp STTC--TTEEEEECC-----CHHHHHHHHHHHHTC
T ss_pred CCCC--CCeEEEEeC-----CHHHHHHHHHHHHhh
Confidence 3332 369999993 589999999999753
No 122
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.83 E-value=2.1e-20 Score=185.81 Aligned_cols=283 Identities=13% Similarity=0.072 Sum_probs=186.3
Q ss_pred cEEEeCcH-HHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHH
Q psy14299 4 KPFLLPGG-SISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICS 81 (448)
Q Consensus 4 ~g~~t~gg-T~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e 81 (448)
.+++|+|+ |+++..++.....+ | .+++.|+++..+|++... ++..| +++.++.++ ++.+|++
T Consensus 68 ~v~~~~g~gt~al~~~~~~l~~~--------~---~~g~~vi~~~~~~~~~~~-~~~~g----~~~~v~~~~~~~~~d~~ 131 (360)
T 1w23_A 68 QILFLQGGASLQFTMLPMNLLTK--------G---TIGNYVLTGSWSEKALKE-AKLLG----ETHIAASTKANSYQSIP 131 (360)
T ss_dssp EEEEESSHHHHHHHHHHHHHCCT--------T---CEEEEEECSHHHHHHHHH-HHTTS----EEEEEEECGGGTSCSCC
T ss_pred eEEEECCcchHHHHHHHHHhcCC--------C---CcccEEEecchhHHHHHH-HHHhC----CeEEeecccccCcCCcc
Confidence 57899998 99988877655432 1 245678888888887443 34333 477888875 6678999
Q ss_pred HHHH-HHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 82 FLEQ-TIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 82 ~Le~-~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
+|++ ++++ ++++|++++++|++|.+.| + ++++||+++++|++|+.+..+.+ +.. .|+++.
T Consensus 132 ~l~~~~i~~------~~k~v~~~~~~nptG~~~~--~---i~~~~~~~li~D~a~~~~~~~~~-----~~~---~di~~~ 192 (360)
T 1w23_A 132 DFSEFQLNE------NDAYLHITSNNTIYGTQYQ--N---FPEINHAPLIADMSSDILSRPLK-----VNQ---FGMIYA 192 (360)
T ss_dssp CGGGCCCCT------TEEEEEEESEETTTTEECS--S---CCCCCSSCEEEECTTTTTSSCCC-----GGG---CSEEEE
T ss_pred chHhhccCC------CCCEEEEeCCCCCcceecc--c---ccccCCceEEEechhhcCCCCcC-----ccc---CCEEEE
Confidence 9988 7732 5899999999999999866 3 33389999999999998765432 111 389999
Q ss_pred CCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 161 NPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 161 s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
++||+++ |.|+|+++++++ .+.......+.++... ...+
T Consensus 193 s~sK~~~-~~G~G~~~~~~~-~~~~~~~~~~~~~~~~---------------------------------------~~~~ 231 (360)
T 1w23_A 193 GAQKNLG-PSGVTVVIVKKD-LLNTKVEQVPTMLQYA---------------------------------------THIK 231 (360)
T ss_dssp ETTTTTS-CTTCEEEEEEHH-HHCSCCTTCCGGGCHH---------------------------------------HHHH
T ss_pred EcccccC-CCCcEEEEEcHH-HHhhcccCCcchhhhh---------------------------------------hhhh
Confidence 9999886 778999998764 3322211111111000 0000
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCc-cHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL-GFRHF 319 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~ 319 (448)
.+....+.+...+.++..+++....+ |++++
T Consensus 232 ------------------------------------------------~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~ 263 (360)
T 1w23_A 232 ------------------------------------------------SDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAI 263 (360)
T ss_dssp ------------------------------------------------TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred ------------------------------------------------ccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHH
Confidence 00000112233344555566665555 78999
Q ss_pred HHHHHHHHHHHHHHhhcCCCe-EEeccCC--cee-eEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEe
Q psy14299 320 VDNAVDCSRYFLSQISQRPGF-RLVIPEF--QCT-NICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGY 395 (448)
Q Consensus 320 ~~~~~~l~~~~~~~L~~~pg~-~l~~~~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~ 395 (448)
.++..++++++.+.|+++|++ ... .++ ..+ ++.|.+ |.. ....++.+.|.++| +.+.+
T Consensus 264 ~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~---------------~~~~~~~~~l~~~g-i~~~~ 325 (360)
T 1w23_A 264 AKQNEEKAKIIYDTIDESNGFYVGH-AEKGSRSLMNVTFNL-RNE---------------ELNQQFLAKAKEQG-FVGLN 325 (360)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSSEES-SCGGGBCSSEEEEEC-SSH---------------HHHHHHHHHHHHTT-EESCB
T ss_pred HHHHHHHHHHHHHHHHHccCccccc-CCchhccCcEEEEEc-CCC---------------ccHHHHHHHHHHCC-eeeec
Confidence 999999999999999999765 653 223 234 555543 110 01236778888888 44433
Q ss_pred eecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 396 QPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 396 ~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
... .++++|+++ +.+++++|+++++++|+++.+
T Consensus 326 ~~~----~~~~iRis~--~~~~~~~~i~~~~~~l~~~~~ 358 (360)
T 1w23_A 326 GHR----SVGGCRASI--YNAVPIDACIALRELMIQFKE 358 (360)
T ss_dssp CCT----TTCSEEEEC--CTTSCHHHHHHHHHHHHHHHH
T ss_pred CCC----CCCeEEEEe--cCCCCHHHHHHHHHHHHHHHh
Confidence 221 136899999 678999999999999998765
No 123
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.83 E-value=1.8e-19 Score=181.56 Aligned_cols=150 Identities=13% Similarity=0.040 Sum_probs=117.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC--CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--~g~id~e 81 (448)
..++|+|||+++.+++.+..+ +++.|+++...|.++...++..|. +++.+|.++ ++.+|++
T Consensus 93 ~i~~t~g~~~al~~~~~~l~~--------------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~ 155 (385)
T 1b5p_A 93 ETIVTVGGSQALFNLFQAILD--------------PGDEVIVLSPYWVSYPEMVRFAGG---VVVEVETLPEEGFVPDPE 155 (385)
T ss_dssp GEEEESHHHHHHHHHHHHHCC--------------TTCEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGGTTCCCHH
T ss_pred HEEEcCChHHHHHHHHHHhcC--------------CCCEEEEcCCCchhHHHHHHHcCC---EEEEeecCcccCCCCCHH
Confidence 478999999999888876533 567788899999999999999988 789999874 4589999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCC-CccE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGIN-RANS 157 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~-~aD~ 157 (448)
+|++++++ ++++|++++++|+||.+.| +++|+++|++||+++++|++|+......+. . .+..+. ..++
T Consensus 156 ~l~~~l~~------~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~-~~~~~~~~~~i 227 (385)
T 1b5p_A 156 RVRRAITP------RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEH-F-SPGRVAPEHTL 227 (385)
T ss_dssp HHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCC-C-CGGGTCTTTEE
T ss_pred HHHHhcCC------CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCC-C-CHHHcCCCCEE
Confidence 99998854 4789999999999999866 899999999999999999998865431110 0 011111 2467
Q ss_pred EEECCccccCCCCc--eEEEEEec
Q psy14299 158 VSWNPHKMLGAPLQ--CSILLIKE 179 (448)
Q Consensus 158 ~~~s~hK~l~~P~g--~G~l~vr~ 179 (448)
++.+++|+++.| | +|+++.++
T Consensus 228 ~~~s~SK~~~~~-G~RiG~~~~~~ 250 (385)
T 1b5p_A 228 TVNGAAKAFAMT-GWRIGYACGPK 250 (385)
T ss_dssp EEEESTTTTTCG-GGCCEEEECCH
T ss_pred EEEechhhcCCc-ccceEEEEeCH
Confidence 888999998754 5 78887744
No 124
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.83 E-value=9.7e-20 Score=184.40 Aligned_cols=285 Identities=11% Similarity=-0.015 Sum_probs=185.9
Q ss_pred cEEE-eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH-HHHHHHHh--CCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFL-LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS-MLKAAHWL--GIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~-t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s-~~~~~~~~--g~~~~~v~~v~~~~~g~id 79 (448)
.++| |+|||+++..++.+..+ ++ +++++...|.. ....+... |. +++.++.+++...+
T Consensus 98 ~i~~~t~g~t~al~~~~~~l~~--------------~g-v~~v~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~g~~~~ 159 (398)
T 2fyf_A 98 EVILGNGGATAFWDAAAFGLID--------------KR-SLHLTYGEFSAKFASAVSKNPFVG---EPIIITSDPGSAPE 159 (398)
T ss_dssp EEEEEETCHHHHHHHHHHHTCS--------------SC-EEEEECSHHHHHHHHHHHHCTTSC---CCEEEECCTTCCCC
T ss_pred eEEEeCCchhHHHHHHHHHhcC--------------CC-eEEEeCCHHHHHHHHHHHHhCCCC---ceEEEecCCCCCCC
Confidence 4677 99999999888876532 44 23335556643 23345555 44 57788887333333
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
. + + ..++++|++++++|++|.+.|+++|.++ +|+++|+|++|+.+..+.+. . .+|+++
T Consensus 160 ~-~----i------~~~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~-----~---~~di~~ 217 (398)
T 2fyf_A 160 P-Q----T------DPSVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDI-----A---ETDAYY 217 (398)
T ss_dssp C-C----C------CTTCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCG-----G---GCSEEE
T ss_pred c-c----c------cCCCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCc-----c---cCcEEE
Confidence 2 1 2 1357899999999999999999999987 89999999999987654321 1 368999
Q ss_pred ECCccccCCCCceEEEEEeccchhhhhccC------CcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChH
Q psy14299 160 WNPHKMLGAPLQCSILLIKEKGLLHQANAT------AATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNL 233 (448)
Q Consensus 160 ~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~------~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 233 (448)
.++||+++.|.|+|+++++++ .+...... .++|+....
T Consensus 218 ~s~sK~~~~~gg~g~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~----------------------------------- 261 (398)
T 2fyf_A 218 FAPQKNFASDGGLWLAIMSPA-ALSRIEAIAATGRWVPDFLSLPI----------------------------------- 261 (398)
T ss_dssp ECTTSTTCSCSSEEEEEECHH-HHHHHHHHHHTTCCCCGGGCHHH-----------------------------------
T ss_pred EecCcccCCCCceEEEEECHH-HHHHhhcccccCCCCCcEEehHH-----------------------------------
Confidence 999999998878999888664 33322110 011111000
Q ss_pred HHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcC
Q psy14299 234 GFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGN 313 (448)
Q Consensus 234 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (448)
..... . .+....+.+...+.++..+++....
T Consensus 262 -~~~~~----~--------------------------------------------~~~~~~t~~~~~~~a~~~al~~~~~ 292 (398)
T 2fyf_A 262 -AVENS----L--------------------------------------------KNQTYNTPAIATLALLAEQIDWLVG 292 (398)
T ss_dssp -HHHHH----T--------------------------------------------TTCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred -Hhhhc----c--------------------------------------------cCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 00000 0 0001112233445556667777666
Q ss_pred cc-HHHHHHHHHHHHHHHHHHhhcCCCeEEecc-CC--cee-eEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC
Q psy14299 314 LG-FRHFVDNAVDCSRYFLSQISQRPGFRLVIP-EF--QCT-NICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG 388 (448)
Q Consensus 314 ~G-~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~-~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~ 388 (448)
+| ++++.++..++++++.+.|+++||++++ . ++ ..+ ++.|.+ |.+++ ..++.+.|.++
T Consensus 293 ~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~-~~~~~---------------~~~l~~~L~~~ 355 (398)
T 2fyf_A 293 NGGLDWAVKRTADSSQRLYSWAQERPYTTPF-VTDPGLRSQVVGTIDF-VDDVD---------------AGTVAKILRAN 355 (398)
T ss_dssp HTSHHHHHHHHHHHHHHHHHHHHHSTTEEES-CCSGGGBCSSEEEEEE-CTTSC---------------HHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHcCCceec-cCChhhcCCcEEEEEC-CCCCC---------------HHHHHHHHHHC
Confidence 66 9999999999999999999999999986 3 23 345 555554 22222 23788899999
Q ss_pred CcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 389 GTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 389 g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
|+. +.++ ... ..++++|+|+ +.++|++|+++++++|+++.++
T Consensus 356 gI~-v~~g-~~~-~~~~~iRis~--~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 356 GIV-DTEP-YRK-LGRNQLRVAM--FPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp TCB-CCSC-CTT-TCSSEEEEEC--CTTSCHHHHHHHHHHHHHHHHT
T ss_pred CcE-EecC-ccc-CCCCEEEEEe--cCCCCHHHHHHHHHHHHHHHHh
Confidence 844 3332 111 1137899999 5789999999999999988654
No 125
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.83 E-value=1.4e-19 Score=178.35 Aligned_cols=147 Identities=8% Similarity=0.013 Sum_probs=116.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++||+++..++.+... +++.|+++..+|.++...+ +..|. +++.++. +|
T Consensus 15 ~~i~~~sG~~a~~~~~~~~~~--------------~g~~v~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~-----~d 72 (331)
T 1pff_A 15 ACAATASGMGAIAASVWTFLK--------------AGDHLISDDCLYGCTHALFEHQLRKFGV---EVDFIDM-----AV 72 (331)
T ss_dssp EEEEESSHHHHHHHHHHHHCC--------------TTCEEEEESCCCHHHHHHHHTHHHHTTC---EEEEECT-----TS
T ss_pred eEEEeCChHHHHHHHHHHhcC--------------CCCEEEEcCCCcchHHHHHHHHHHhcCC---EEEEeCC-----CC
Confidence 467788889999888876532 5667889999999987775 34566 6777775 48
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHH-cCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEK-YDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~-~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
++++++++++ ++++|++++++|++|.+.|+++|.++|++ ||+++++|++|+.+....+. . ..+|++
T Consensus 73 ~~~l~~~i~~------~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~-----~--~~~d~~ 139 (331)
T 1pff_A 73 PGNIEKHLKP------NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPL-----D--LGVDIV 139 (331)
T ss_dssp TTHHHHTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGG-----G--GTCSEE
T ss_pred HHHHHHhhcC------CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChh-----h--cCCcEE
Confidence 8999988853 57899999999999999999999999999 99999999999977653221 1 137999
Q ss_pred EECCccccCCCCc--eEEEEEeccchhhh
Q psy14299 159 SWNPHKMLGAPLQ--CSILLIKEKGLLHQ 185 (448)
Q Consensus 159 ~~s~hK~l~~P~g--~G~l~vr~~~~~~~ 185 (448)
+.|+||++++|.+ .|+++.+++++...
T Consensus 140 ~~s~~K~~~~~~~r~~G~~~~~~~~~~~~ 168 (331)
T 1pff_A 140 VHSATKYINGHTDVVAGLVCSRADIIAKV 168 (331)
T ss_dssp EEETTTTTSSSSSCCCEEEEECHHHHHHH
T ss_pred EEECccccCCCCCceEEEEEeCcHHHHHH
Confidence 9999999999988 78888766344433
No 126
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.83 E-value=4.9e-19 Score=185.22 Aligned_cols=158 Identities=10% Similarity=0.021 Sum_probs=118.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC--CCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER--GQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~--g~id~e 81 (448)
..++|+|+|+++.+++.+.... +++.|+++...|.++..+++..|. +++.++.+++ +.+|++
T Consensus 159 ~i~~t~G~~~al~~~~~~l~~~-------------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~ 222 (500)
T 3tcm_A 159 DIFLTDGASPGVHLMMQLLIRN-------------EKDGILVPIPQYPLYSASIALHGG---ALVPYYLNESTGWGLETS 222 (500)
T ss_dssp GEEEESSSHHHHHHHHHHHCCS-------------TTEEEEEEESCCTHHHHHHHHTTC---EEEEEECBTTTTSBCCHH
T ss_pred cEEEcCCHHHHHHHHHHHHcCC-------------CCCEEEEeCCCcHhHHHHHHHcCC---EEEEEecccccCCCCCHH
Confidence 5789999999998888776422 678899999999999999999998 7888988764 589999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEeccccccccccc----chhhhhcCC--
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSE----KYSFVLKGI-- 152 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~----~~~~~~~~~-- 152 (448)
+|+++|++....+.++++|++++++|+||.+.+ +++|+++|++||+++++|++|+...+... ........+
T Consensus 223 ~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~ 302 (500)
T 3tcm_A 223 DVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGY 302 (500)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhcc
Confidence 999999876555557889999999999998855 67777789999999999999987554211 111001111
Q ss_pred --CCcc-EEEECCccccCCCCc--eEEEEE
Q psy14299 153 --NRAN-SVSWNPHKMLGAPLQ--CSILLI 177 (448)
Q Consensus 153 --~~aD-~~~~s~hK~l~~P~g--~G~l~v 177 (448)
...+ ++..|++|.+.+++| +|++.+
T Consensus 303 ~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 332 (500)
T 3tcm_A 303 GEEDLPLVSYQSVSKGYYGECGKRGGYFEI 332 (500)
T ss_dssp SSSCCCEEEEEESSSTTTCCGGGCCEEEEE
T ss_pred ccCCeEEEEEecCCccCCCCCccceEEEEE
Confidence 1122 445589999844444 566665
No 127
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.83 E-value=8.3e-19 Score=179.22 Aligned_cols=153 Identities=12% Similarity=0.005 Sum_probs=118.6
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHH-hCCCCCcEEEEecCC-CCCcCHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHW-LGIGMDNVIRVKTNE-RGQMICSF 82 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~-~g~~~~~v~~v~~~~-~g~id~e~ 82 (448)
.++|+|||+++..++.+... +++.|+++...|.++...++. .|. +++.+|.++ ++.+|+++
T Consensus 116 i~~t~g~~~al~~~~~~l~~--------------~gd~Vl~~~p~y~~~~~~~~~~~g~---~~~~~~~~~~~~~~d~~~ 178 (430)
T 2x5f_A 116 PIVTNALTHGLSLVGDLFVN--------------QDDTILLPEHNWGNYKLVFNTRNGA---NLQTYPIFDKDGHYTTDS 178 (430)
T ss_dssp CEEESHHHHHHHHHHHHHCC--------------TTCEEEEESSCCTHHHHHHTTTTCC---EEEEECCBCTTSCBCSHH
T ss_pred EEEcCCchHHHHHHHHHHhC--------------CCCEEEEcCCcCccHHHHHHHhcCC---eEEEEeccCccCCcCHHH
Confidence 79999999999888876643 567788999999999999888 887 788888865 46899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHH-----cCCEEEEecccccccccccch-h-h-hhcC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEK-----YDLWMHVDACWGGSLIFSEKY-S-F-VLKG 151 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~-----~g~~l~VD~A~~~~~~~~~~~-~-~-~~~~ 151 (448)
|++++++. +.++++|++++++|+||.+.| +++|.++|++ ||+++++|++|+......... . . .+.+
T Consensus 179 l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 255 (430)
T 2x5f_A 179 LVEALQSY---NKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTN 255 (430)
T ss_dssp HHHHHHHC---CSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHT
T ss_pred HHHHHHhc---CCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhh
Confidence 99999752 235789999999999999988 8999999999 999999999998654321100 1 0 1222
Q ss_pred CCCc---cEEEECCccccCCCC-ceEEEEE
Q psy14299 152 INRA---NSVSWNPHKMLGAPL-QCSILLI 177 (448)
Q Consensus 152 ~~~a---D~~~~s~hK~l~~P~-g~G~l~v 177 (448)
.... ++++.++||+++.|. .+|++++
T Consensus 256 ~~~~~~~~i~~~s~sK~~~~~G~riG~~~~ 285 (430)
T 2x5f_A 256 LHSNAILPIRLDGATKEFFAWGFRVGFMTF 285 (430)
T ss_dssp TCCTTEEEEEEEEHHHHTTCGGGCCEEEEE
T ss_pred ccCCcceEEEEEecccCCCCCCCCeEEEEE
Confidence 2233 577889999997552 3688887
No 128
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.83 E-value=1.7e-18 Score=174.62 Aligned_cols=144 Identities=13% Similarity=0.058 Sum_probs=114.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++||+++..++..+.. +++.|+++..+|.++.... +..|. ++..++.+ |
T Consensus 69 ~~i~~~sGt~a~~~~~~~~~~--------------~g~~vl~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~-----d 126 (386)
T 1cs1_A 69 GAVLTNTGMSAIHLVTTVFLK--------------PGDLLVAPHDCYGGSYRLFDSLAKRGCY---RVLFVDQG-----D 126 (386)
T ss_dssp EEEEESSHHHHHHHHHHHHCC--------------TTCEEEEETTCCHHHHHHHHHHHTTTSC---EEEEECTT-----C
T ss_pred cEEEeCCHHHHHHHHHHHHhC--------------CCCEEEEecCCcHhHHHHHHHHHHhcCC---EEEEeCCC-----C
Confidence 356667779999988876632 5667888999999876654 33455 67778764 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+++|++++++ ++++|++++++|++|.+.|+++|.++|++||+++++|++|+.+....+. . . .+|+++
T Consensus 127 ~~~l~~~i~~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-----~-~-~~di~~ 193 (386)
T 1cs1_A 127 EQALRAALAE------KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPL-----A-L-GADLVL 193 (386)
T ss_dssp HHHHHHHHHT------CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-----G-G-TCSEEE
T ss_pred HHHHHHhhcc------CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCcc-----c-c-CceEEE
Confidence 9999999964 4789999999999999999999999999999999999999987653221 1 1 479999
Q ss_pred ECCccccCCCCce--EEEEEeccch
Q psy14299 160 WNPHKMLGAPLQC--SILLIKEKGL 182 (448)
Q Consensus 160 ~s~hK~l~~P~g~--G~l~vr~~~~ 182 (448)
.++||++++|.+. |+++++++++
T Consensus 194 ~s~sK~~~~~~~~~~G~~~~~~~~l 218 (386)
T 1cs1_A 194 HSCTKYLNGHSDVVAGVVIAKDPDV 218 (386)
T ss_dssp EETTTTTTCSSCCCCEEEEESSHHH
T ss_pred EcCcccccCCCCceeEEEEeCcHHH
Confidence 9999999999874 8888866343
No 129
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.83 E-value=1.2e-18 Score=175.89 Aligned_cols=153 Identities=14% Similarity=0.093 Sum_probs=120.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCC-eEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPP-LCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~-~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e 81 (448)
..++|+|||+++..++.++.. ++ +.|+++...|.++...++..|. +++.+|.++ ++.+|++
T Consensus 101 ~i~~~~g~~~al~~~~~~l~~--------------~g~d~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~d~~ 163 (398)
T 3ele_A 101 NLYMTMGAAASLSICFRALTS--------------DAYDEFITIAPYFPEYKVFVNAAGA---RLVEVPADTEHFQIDFD 163 (398)
T ss_dssp GEEEESSHHHHHHHHHHHHCC--------------STTCEEEEESSCCTHHHHHHHHTTC---EEEEECCCTTTSSCCHH
T ss_pred HEEEccCHHHHHHHHHHHHcC--------------CCCCEEEEeCCCchhhHHHHHHcCC---EEEEEecCCcCCcCCHH
Confidence 578999999999988877643 56 7788999999999999999998 799999875 4689999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHH------cCCEEEEecccccccccccchhhhhcCC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEK------YDLWMHVDACWGGSLIFSEKYSFVLKGI 152 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~------~g~~l~VD~A~~~~~~~~~~~~~~~~~~ 152 (448)
+|++++++ ++++|++++++|+||.+.| +++|+++|++ ||+++++|++|+............. ..
T Consensus 164 ~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~ 236 (398)
T 3ele_A 164 ALEERINA------HTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVT-KY 236 (398)
T ss_dssp HHHHTCCT------TEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGG-GT
T ss_pred HHHHHhCc------CCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChH-hh
Confidence 99999854 5889999999999999988 7777799999 9999999999987543211111111 11
Q ss_pred CCccEEEECCccccC-CCCceEEEEEecc
Q psy14299 153 NRANSVSWNPHKMLG-APLQCSILLIKEK 180 (448)
Q Consensus 153 ~~aD~~~~s~hK~l~-~P~g~G~l~vr~~ 180 (448)
...++++.+++|+++ ....+|+++++++
T Consensus 237 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 265 (398)
T 3ele_A 237 YDNTLVCYSYSKSLSLPGERIGYVLVPDE 265 (398)
T ss_dssp CSSEEEEEESTTTSSCTTTCCEEEECCTT
T ss_pred cCCeEEEEehhhcCCCccceeEEEEEcch
Confidence 235688889999997 4456888877654
No 130
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.82 E-value=1.5e-18 Score=177.19 Aligned_cols=148 Identities=11% Similarity=0.108 Sum_probs=114.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e~ 82 (448)
.+++|+|||+++..++.++. +++.|+++..+|.++..+++..|. +++.++.++ ++.+|+++
T Consensus 69 ~v~~~~ggt~al~~~l~~l~---------------~gd~Vlv~~~~~~~~~~~~~~~G~---~~~~v~~~~~~~~~d~~~ 130 (424)
T 2po3_A 69 HAVATCNATAGLQLLAHAAG---------------LTGEVIMPSMTFAATPHALRWIGL---TPVFADIDPDTGNLDPDQ 130 (424)
T ss_dssp EEEEESCHHHHHHHHHHHHT---------------CCSEEEEESSSCTHHHHHHHHTTC---EEEEECBCTTTSSBCHHH
T ss_pred eEEEeCCHHHHHHHHHHHcC---------------CCCEEEECCCccHHHHHHHHHcCC---EEEEEecCCCcCCcCHHH
Confidence 47999999999998887652 235788999999999999999998 788999886 67899999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
|++++++ ++++|++++ ++|...|+++|.++|++||+++++|++|+.+...... . +.. ..|+++.|+
T Consensus 131 l~~~i~~------~~~~v~~~~---~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~-~--~~~--~~di~~~S~ 196 (424)
T 2po3_A 131 VAAAVTP------RTSAVVGVH---LWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGR-P--AGS--LGDAEVFSF 196 (424)
T ss_dssp HGGGCCT------TEEEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE-E--TTS--SSSEEEEEC
T ss_pred HHHhhCc------CCcEEEEEC---CCCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCe-e--ccc--ccCEEEEeC
Confidence 9998853 477887754 7999999999999999999999999999965542111 1 111 247777777
Q ss_pred c--cccCCCCceEEEEEeccchhh
Q psy14299 163 H--KMLGAPLQCSILLIKEKGLLH 184 (448)
Q Consensus 163 h--K~l~~P~g~G~l~vr~~~~~~ 184 (448)
| |++++ ...|+++.+++++..
T Consensus 197 sk~K~l~~-~~~G~~v~~~~~l~~ 219 (424)
T 2po3_A 197 HATKAVNA-FEGGAVVTDDADLAA 219 (424)
T ss_dssp CTTSSSCC-SSCEEEEESCHHHHH
T ss_pred CCCCCccC-CCCeEEEeCCHHHHH
Confidence 6 88876 556777665444433
No 131
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.82 E-value=8.9e-20 Score=182.66 Aligned_cols=150 Identities=15% Similarity=0.097 Sum_probs=118.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-CCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-GQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-g~id~e~ 82 (448)
.+++|+|||+|+..++.+++. .+++.|+++..+|.++..+++..|. +++.++.+++ +.+|+++
T Consensus 52 ~~~~~~sGt~al~~al~~~~~-------------~~gd~Vi~~~~~~~~~~~~~~~~G~---~~~~~~~~~~~~~~d~~~ 115 (367)
T 3nyt_A 52 YCISCANGTDALQIVQMALGV-------------GPGDEVITPGFTYVATAETVALLGA---KPVYVDIDPRTYNLDPQL 115 (367)
T ss_dssp EEEEESCHHHHHHHHHHHTTC-------------CTTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTTTCSBCGGG
T ss_pred cEEEeCCHHHHHHHHHHHhCC-------------CCcCEEEECCCccHHHHHHHHHcCC---EEEEEecCCccCCcCHHH
Confidence 579999999999998877532 2677899999999999999999998 7899998875 8999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC-
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN- 161 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s- 161 (448)
|++++++ ++++|+ +++++|...|+++|.++|++||+++|+|++|+.+....... .... .|++++|
T Consensus 116 l~~~i~~------~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~---~~~~--~di~~~Sf 181 (367)
T 3nyt_A 116 LEAAITP------RTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKR---SCNL--STVACTSF 181 (367)
T ss_dssp TGGGCCT------TEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEE---TTSS--SSEEEEEC
T ss_pred HHHhcCc------CCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCee---ccCC--CCEEEEEC
Confidence 9999853 466666 56789999999999999999999999999998766532111 1111 2788888
Q ss_pred -CccccCCCCceEEEEEeccchh
Q psy14299 162 -PHKMLGAPLQCSILLIKEKGLL 183 (448)
Q Consensus 162 -~hK~l~~P~g~G~l~vr~~~~~ 183 (448)
+||+++++...|+++.+++.+.
T Consensus 182 ~~~K~l~~~g~gg~~~~~~~~l~ 204 (367)
T 3nyt_A 182 FPSAPLGCYGDGGAIFTNDDELA 204 (367)
T ss_dssp CTTSSSCCSSCCEEEEESCHHHH
T ss_pred CCCCcCCCcCceeEEEeCCHHHH
Confidence 5899987555666666555443
No 132
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.82 E-value=7.4e-19 Score=178.20 Aligned_cols=145 Identities=12% Similarity=0.081 Sum_probs=116.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~id 79 (448)
.+++++|||+||..++..+.. +++.|+++...|.+....+ +..|. ++..++.+ |
T Consensus 83 ~~~~~~sGt~A~~~al~~~~~--------------~gd~Vi~~~~~y~~~~~~~~~~~~~~g~---~~~~v~~~-----d 140 (392)
T 3qhx_A 83 FGRAFSSGMAAADCALRAMLR--------------PGDHVVIPDDAYGGTFRLIDKVFTGWNV---EYTPVALA-----D 140 (392)
T ss_dssp EEEEESSHHHHHHHHHHHHCC--------------TTCEEEEETTCCHHHHHHHHHTGGGGTC---EEEEECTT-----C
T ss_pred cEEEECCHHHHHHHHHHHHhC--------------CCCEEEEeCCCcchHHHHHHHHHHhcCc---EEEEeCCC-----C
Confidence 478999999999988876633 5667999999999887776 34455 68888875 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+++|++++++ ++++|++..++|++|.+.|+++|+++|++||+++|+|++|+.+....+ . .. .+|+++
T Consensus 141 ~~~l~~~i~~------~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~~~-~-----~~-~~di~~ 207 (392)
T 3qhx_A 141 LDAVRAAIRP------TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQQP-L-----SL-GADVVL 207 (392)
T ss_dssp HHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCG-G-----GG-TCSEEE
T ss_pred HHHHHHhhCC------CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccCCh-H-----Hh-CCcEEE
Confidence 9999999864 588999999999999999999999999999999999999986643211 1 11 479999
Q ss_pred ECCccccCCCCc--eEEEEEeccchh
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKEKGLL 183 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~~~~~ 183 (448)
.|+||++++|.+ .|+++.+++.+.
T Consensus 208 ~S~sK~lg~~g~~~~G~v~~~~~~~~ 233 (392)
T 3qhx_A 208 HSTTKYIGGHSDVVGGALVTNDEELD 233 (392)
T ss_dssp EETTTTTTCSSCCCCEEEEESCHHHH
T ss_pred EcCccccCCCCCceEEEEEECcHHHH
Confidence 999999997754 777777654443
No 133
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.82 E-value=1.8e-18 Score=175.51 Aligned_cols=142 Identities=11% Similarity=0.032 Sum_probs=115.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++||++|..++.++.. +++.|+++...|.++...+ +..|+ ++..++.+ |
T Consensus 82 ~~i~~~sG~~a~~~~l~~~~~--------------~gd~vl~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~-----d 139 (398)
T 1gc0_A 82 AGLALASGMGAITSTLWTLLR--------------PGDEVLLGNTLYGCTFAFLHHGIGEFGV---KLRHVDMA-----D 139 (398)
T ss_dssp EEEEESSHHHHHHHHHHHHCC--------------TTCEEEEESSCCSHHHHHHHHTGGGGTC---EEEEECTT-----C
T ss_pred cEEEECCHHHHHHHHHHHHhc--------------CCCEEEEeCCCchhHHHHHHHHHHHcCC---EEEEECCC-----C
Confidence 468888999999988877633 5667899999999988876 34455 67777764 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+....+. . ..+|+++
T Consensus 140 ~~~l~~~i~~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~------~-~~~d~~~ 206 (398)
T 1gc0_A 140 LQALEAAMTP------ATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPL------E-LGADLVV 206 (398)
T ss_dssp HHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGG------G-GTCSEEE
T ss_pred HHHHHHhcCC------CCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCch------h-hCceEEE
Confidence 9999998854 5889999999999999999999999999999999999999977653221 1 1479999
Q ss_pred ECCccccCCCCc--eEEEEEecc
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKEK 180 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~~ 180 (448)
.|+||++++|.+ .|+++.+++
T Consensus 207 ~S~sK~~~~~~~~~~G~l~~~~~ 229 (398)
T 1gc0_A 207 HSATKYLSGHGDITAGIVVGSQA 229 (398)
T ss_dssp EETTTTTTCSSSCCCEEEEECHH
T ss_pred ECCccccCCCCCCeEEEEEEChH
Confidence 999999999987 688877654
No 134
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.82 E-value=5.3e-19 Score=176.28 Aligned_cols=270 Identities=10% Similarity=0.049 Sum_probs=181.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|||+++..++.+... +++.|+++...|.++...++..|. +++.++.++++.+ +++
T Consensus 84 ~i~~t~g~~~al~~~~~~l~~--------------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~--~~l 144 (360)
T 3hdo_A 84 WIIMANGSDEVLNNLIRAFAA--------------EGEEIGYVHPSYSYYGTLAEVQGA---RVRTFGLTGDFRI--AGF 144 (360)
T ss_dssp GEEEESSHHHHHHHHHHHHCC--------------TTCEEEEESSSCTHHHHHHHHHTC---EEEEECBCTTSSB--TTC
T ss_pred eEEEcCCHHHHHHHHHHHHhC--------------CCCEEEEcCCChHHHHHHHHHCCC---EEEEeeCCCCCCH--HHH
Confidence 579999999999888876533 567789999999999999999998 7899998877665 333
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++. .+++++++++++|++|.+.|+++|.++|+++|+++++|++|+..... .... .... ...++++.+++
T Consensus 145 ~~~--------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~-~~~~-~~~~-~~~~i~~~s~s 213 (360)
T 3hdo_A 145 PER--------YEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAES-NALE-LVRR-HENVVVTRTLS 213 (360)
T ss_dssp CSS--------BCSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSC-CCTH-HHHH-CSSEEEEEEST
T ss_pred Hhh--------cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCc-chhH-Hhcc-CCCEEEEecch
Confidence 222 13569999999999999999999999999999999999999853211 1111 1111 12457788999
Q ss_pred cccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 164 KMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 164 K~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
|+++.| ..+|+++. ++++..........| + ...
T Consensus 214 K~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~-----------------~------~~~---------------------- 247 (360)
T 3hdo_A 214 KSYSLAGMRIGLAIA-RPEVIAALDKIRDHY-----------------N------LDR---------------------- 247 (360)
T ss_dssp TTTSCTTSCCEEEEC-CHHHHHHHHHHSCSC-----------------C------SCH----------------------
T ss_pred HhhcCCccceeeEee-CHHHHHHHHHhCCCC-----------------C------CCH----------------------
Confidence 998744 45677766 434333322111000 0 000
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 322 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 322 (448)
+.+..+..+++. .++++++.++
T Consensus 248 --------------------------------------------------------~~~~a~~~~l~~--~~~~~~~~~~ 269 (360)
T 3hdo_A 248 --------------------------------------------------------LAQAACVAALRD--QAYLSECCRR 269 (360)
T ss_dssp --------------------------------------------------------HHHHHHHHHHHC--HHHHHHHHHH
T ss_pred --------------------------------------------------------HHHHHHHHHhcC--HHHHHHHHHH
Confidence 011111122221 2346677888
Q ss_pred HHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcc
Q psy14299 323 AVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRN 402 (448)
Q Consensus 323 ~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~ 402 (448)
..++++++.+.|+++ |+++. ++..+.+.+.+ ++.+ ..++.+.|.++| +.+.+....+
T Consensus 270 ~~~~~~~l~~~L~~~-~~~~~--~~~~~~~~~~~--~~~~---------------~~~l~~~l~~~g-i~v~~~~~~~-- 326 (360)
T 3hdo_A 270 IRETREWFTTELRSI-GYDVI--PSQGNYLFATP--PDRD---------------GKRVYDGLYARK-VLVRHFSDPL-- 326 (360)
T ss_dssp HHHHHHHHHHHHHHT-TCEEC--CCSSSEEEEEC--TTCC---------------HHHHHHHHHHTT-EECBCCCSTT--
T ss_pred HHHHHHHHHHHHHHC-CCEEc--CCCccEEEEEC--CCCC---------------HHHHHHHHHHCC-EEEEECCCCC--
Confidence 889999999999998 89875 44444444432 1211 237888899999 5554433211
Q ss_pred cccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 403 LHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 403 ~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
.++++|+++ + +++|+|+++++|+++.+.
T Consensus 327 ~~~~iRis~--~---~~~e~~~l~~al~~~~~~ 354 (360)
T 3hdo_A 327 LAHGMRISI--G---TREEMEQTLAALKEIGEG 354 (360)
T ss_dssp TTTSEEEEC--C---CHHHHHHHHHHHHHHHC-
T ss_pred CCCEEEEEc--C---CHHHHHHHHHHHHHHhcc
Confidence 237999999 3 899999999999998764
No 135
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.82 E-value=2.1e-18 Score=174.71 Aligned_cols=142 Identities=11% Similarity=0.021 Sum_probs=117.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++||+++..++.++.. +++.|+++..+|.++...+ +..|. +++.++.+ |
T Consensus 81 ~~i~~~sG~~a~~~~l~~~~~--------------~gd~vi~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~-----d 138 (398)
T 2rfv_A 81 AGLATASGISAITTTLLTLCQ--------------QGDHIVSASAIYGCTHAFLSHSMPKFGI---NVRFVDAA-----K 138 (398)
T ss_dssp EEEEESSHHHHHHHHHHHHCC--------------TTCEEEEESSSCHHHHHHHHTHHHHTTC---EEEEECTT-----S
T ss_pred cEEEECCHHHHHHHHHHHHhC--------------CCCEEEEcCCCcccHHHHHHHHHHHcCC---EEEEeCCC-----C
Confidence 468888999999988877633 5677999999999988876 66677 78888875 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+++|++++++ ++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+....+. .. .+|+++
T Consensus 139 ~~~l~~~i~~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~------~~-~~di~~ 205 (398)
T 2rfv_A 139 PEEIRAAMRP------ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPL------QL-GADIVV 205 (398)
T ss_dssp HHHHHHHCCT------TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG------GG-TCSEEE
T ss_pred HHHHHHhcCC------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCch------hh-CCcEEE
Confidence 9999998854 5789999999999999999999999999999999999999977653211 11 379999
Q ss_pred ECCccccCCCCc--eEEEEEecc
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKEK 180 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~~ 180 (448)
.++||++++|.+ .|+++.+++
T Consensus 206 ~s~sK~~~~~g~~~~G~~~~~~~ 228 (398)
T 2rfv_A 206 HSVTKYINGHGDVIGGIIVGKQE 228 (398)
T ss_dssp EETTTTTTCSSCCCCEEEEECHH
T ss_pred EeCcccccCCCCceEEEEEECHH
Confidence 999999999887 688887654
No 136
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.81 E-value=5.8e-19 Score=181.91 Aligned_cols=287 Identities=11% Similarity=0.020 Sum_probs=178.4
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchH-HHHH--HHHhCCCCCcEEEEecC-CCCCcCHH
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYS-MLKA--AHWLGIGMDNVIRVKTN-ERGQMICS 81 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s-~~~~--~~~~g~~~~~v~~v~~~-~~g~id~e 81 (448)
++++|||++|..++.++++ +++.|+++..+|.+ +... ....|... .+..++.+ +++.+|++
T Consensus 111 v~~~sGs~a~~~a~~~~~~--------------~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~d~~ 175 (447)
T 3h7f_A 111 VQPHSGAQANAAVLHALMS--------------PGERLLGLDLANGGHLTHGMRLNFSGKLY-ENGFYGVDPATHLIDMD 175 (447)
T ss_dssp CCCSSHHHHHHHHHHHHCC--------------TTCEEEEECGGGTCCGGGTCTTSHHHHSS-EEEEECCCTTTCSCCHH
T ss_pred EEeCCHHHHHHHHHHHhcC--------------CCCEEEecCcccccccchhhhhhhcCCee-EEEEcCcCcccCCcCHH
Confidence 3388999999888877644 56788888888866 2211 11222211 35556655 46789999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
+|++++++. ++++|+++.+.++++. |+++|.++|++||+++|+|++|+.+......... .+..+|+++.+
T Consensus 176 ~l~~~i~~~-----~~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~---~~~~~di~~~s 245 (447)
T 3h7f_A 176 AVRATALEF-----RPKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPS---PVPHADVVSTT 245 (447)
T ss_dssp HHHHHHHHH-----CCSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCC---STTTCSEEEEE
T ss_pred HHHHHHHhc-----CCeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCC---CCCCCcEEEec
Confidence 999999652 4678888777776655 9999999999999999999998766543222111 12347999999
Q ss_pred CccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHH
Q psy14299 162 PHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 241 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~ 241 (448)
+||++++|.| |+++.++ ++.........++.. .+ ..
T Consensus 246 ~sK~l~G~~g-G~i~~~~-~~~~~l~~~~~~~~~------------------~~-~~----------------------- 281 (447)
T 3h7f_A 246 VHKTLGGGRS-GLIVGKQ-QYAKAINSAVFPGQQ------------------GG-PL----------------------- 281 (447)
T ss_dssp SSGGGCCCSC-EEEEECG-GGHHHHHHHHTTTTC------------------SS-CC-----------------------
T ss_pred CCcCCCCCCe-EEEEECH-HHHHHHhhhcCCccc------------------CC-cc-----------------------
Confidence 9999998987 7776654 333222111001100 00 00
Q ss_pred hhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHH
Q psy14299 242 AVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 321 (448)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 321 (448)
...+.++..++.....++++++.+
T Consensus 282 --------------------------------------------------------~~~~~a~~~a~~~~~~~~~~~~~~ 305 (447)
T 3h7f_A 282 --------------------------------------------------------MHVIAGKAVALKIAATPEFADRQR 305 (447)
T ss_dssp --------------------------------------------------------HHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred --------------------------------------------------------HHHHHHHHHHHHHhhCHHHHHHHH
Confidence 001122233444444556788888
Q ss_pred HHHHHHHHHHHHhhcC----CCeEEeccC-CceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEE--
Q psy14299 322 NAVDCSRYFLSQISQR----PGFRLVIPE-FQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIG-- 394 (448)
Q Consensus 322 ~~~~l~~~~~~~L~~~----pg~~l~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~-- 394 (448)
+..++++++.+.|+++ +|++++ .. .....+.+.+.+.++. ...+.+.|.+.| +.+.
T Consensus 306 ~~~~~~~~l~~~L~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~G-I~v~~~ 368 (447)
T 3h7f_A 306 RTLSGARIIADRLMAPDVAKAGVSVV-SGGTDVHLVLVDLRDSPLD---------------GQAAEDLLHEVG-ITVNRN 368 (447)
T ss_dssp HHHHHHHHHHHHHTSHHHHHTTCEEG-GGSCSSSEEEEECTTSSCC---------------HHHHHHHHHHTT-EECBC-
T ss_pred HHHHHHHHHHHHHHhccccCCCeEEe-cCCCCCCEEEEEcCCCCCC---------------HHHHHHHHHHCC-eEEecc
Confidence 8999999999999887 689987 32 2344444444333222 124556666668 4444
Q ss_pred --eeecCCcccccEEEEEecCCCC----CCHHHHHHHHHHHHHHHHHh
Q psy14299 395 --YQPLQHRNLHNFFRLVTTCHPA----SSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 395 --~~~~~g~~~~~~lRis~~~~~~----~t~edid~l~~al~~~~~~~ 436 (448)
+........+..+|+++. .. .+++|+++++++|+++.++.
T Consensus 369 ~i~~~~~~p~~~~~lRig~~--~~~~~~~~~eei~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 369 AVPNDPRPPMVTSGLRIGTP--ALATRGFGDTEFTEVADIIATALATG 414 (447)
T ss_dssp ------------CEEEEECH--HHHHHTCCHHHHHHHHHHHHHHHHSG
T ss_pred cCCCCCCCCCCCCceeccCH--HHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 210011111367999873 33 57999999999999987654
No 137
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.81 E-value=4.1e-18 Score=171.90 Aligned_cols=151 Identities=13% Similarity=0.073 Sum_probs=105.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.+++|+|||+++..++.+++... .++.+|+.+...|.+...+++..|... ..+..++.
T Consensus 106 ~v~~~~gg~~a~~~al~~~~~~~-----------~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-- 172 (395)
T 1vef_A 106 RVFPVNSGTEANEAALKFARAHT-----------GRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-- 172 (395)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH-----------SCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT--
T ss_pred EEEEcCcHHHHHHHHHHHHHHHh-----------CCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCC--
Confidence 47899999999999988765210 134455555556666666666655520 01333433
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccc-hhhhh
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEK-YSFVL 149 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~-~~~~~ 149 (448)
.|+++|++++++ ++++|+++.+++++|.+.| +++|.++|++||+++++|++|+. ...... .....
T Consensus 173 ---~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~-~~~~g~~~~~~~ 242 (395)
T 1vef_A 173 ---NDVEALKRAVDE------ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTG-MGRTGKRFAFEH 242 (395)
T ss_dssp ---TCHHHHHHHCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTT-TTTTSSSSTHHH
T ss_pred ---CcHHHHHHHhcc------CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccC-CccCCchhHhhh
Confidence 489999999853 4788888888888999887 99999999999999999999993 211111 11112
Q ss_pred cCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 150 KGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 150 ~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
.++ ..|++ ++||+++++.++|+++++++
T Consensus 243 ~~~-~~d~~--s~sK~~~~g~~~G~~~~~~~ 270 (395)
T 1vef_A 243 FGI-VPDIL--TLAKALGGGVPLGVAVMREE 270 (395)
T ss_dssp HTC-CCSEE--EECGGGGTTSSCEEEEEEHH
T ss_pred cCC-CCCEE--EEcccccCCCceEEEEehHH
Confidence 222 36877 45999998888999998764
No 138
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.81 E-value=8.1e-19 Score=189.28 Aligned_cols=153 Identities=18% Similarity=0.215 Sum_probs=116.2
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC-----CCc--
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER-----GQM-- 78 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~-----g~i-- 78 (448)
++++|+|.||..++.+... +++.|++++..|.|+..++.+.|. +++.++.+.+ +.+
T Consensus 215 ~v~nGts~An~~ai~al~~--------------pGD~VLv~r~~H~S~~~~l~lsGa---~pv~v~~~~~~~gi~~~i~~ 277 (715)
T 3n75_A 215 MVTNGTSTANKIVGMYSAP--------------AGSTILIDRNCHKSLTHLMMMSDV---TPIYFRPTRNAYGILGGIPQ 277 (715)
T ss_dssp EESSHHHHHHHHHHHHHCC--------------TTCEEEEESSCCHHHHHHHHHSCC---EEEEECCCBCTTCCBCCCCG
T ss_pred EECcHHHHHHHHHHHHhCC--------------CCCEEEECCCccHHHHHHHHHcCC---EEEEEeccccccccccCccc
Confidence 4455556888888776544 788899999999999999999998 7778876532 224
Q ss_pred ---CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCC--
Q psy14299 79 ---ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGIN-- 153 (448)
Q Consensus 79 ---d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~-- 153 (448)
|+++|++++++..+ .++|++++++++ |++|.+.|+++|.++|++++ ++||+||+.+..+.+..+. ...+.
T Consensus 278 ~~~d~e~Le~~l~~~~~-~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~~-~~al~~g 352 (715)
T 3n75_A 278 SEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEG-KCGMSGG 352 (715)
T ss_dssp GGGSHHHHHHHHHHSTT-CCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGTT-SSTTSSS
T ss_pred ccCCHHHHHHHHhhCcC-ccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccccCCcccc-ccccccC
Confidence 89999999986311 123558899998 88999999999999998764 7999999988644433221 11121
Q ss_pred -CccEE---EECCccccCCCCceEEEEEecc
Q psy14299 154 -RANSV---SWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 154 -~aD~~---~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
.+|.+ +.|+||+|++|.++|++++++.
T Consensus 353 ~~aD~vii~~~S~hKtL~gltqgs~i~v~~~ 383 (715)
T 3n75_A 353 RVEGKVIYETQSTHKLLAAFSQASMIHVKGD 383 (715)
T ss_dssp CCTTCEEEEEECHHHHSSCCTTCEEEEEESC
T ss_pred cCCCEEEEEEecccccccCCCCeeEEEeCch
Confidence 25766 8999999999999999999765
No 139
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.81 E-value=2.3e-18 Score=177.77 Aligned_cols=164 Identities=12% Similarity=0.100 Sum_probs=110.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeE---EEecCCCc-hHHHHHHHHhCCCCCcEEEEecC------
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLC---MFTSEDSH-YSMLKAAHWLGIGMDNVIRVKTN------ 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~---Vl~~~~~H-~s~~~~~~~~g~~~~~v~~v~~~------ 73 (448)
.++||+|||+||.+++.+++.... .+++. |+++ ..| .+....+...|. .++.++.+
T Consensus 93 ~v~~t~ggt~A~~~al~~~~~~~~----------~~Gd~~~~viv~-~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~ 158 (467)
T 1ax4_A 93 YIIPAHQGRGAENILFPVLLKYKQ----------KEGKAKNPVFIS-NFHFDTTAAHVELNGC---KAINIVTEKAFDSE 158 (467)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHH----------HTTCCSSCEEEE-SSCCHHHHHHHHHTTC---EEEECBCGGGGCTT
T ss_pred cEEEcCCcHHHHHHHHHHHHHhhc----------cCCCccceEEEe-ccccchhhHHHhccCC---ceeccccccccccc
Confidence 478999999999999988876200 02333 6666 666 455667777777 55555432
Q ss_pred ----CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcc-ccc---cCHHHHHHHHHHcCCEEEEeccccc-cccccc-
Q psy14299 74 ----ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVL-GAF---DPLDEIATVCEKYDLWMHVDACWGG-SLIFSE- 143 (448)
Q Consensus 74 ----~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~t-G~~---~~l~~I~~ia~~~g~~l~VD~A~~~-~~~~~~- 143 (448)
.++.+|+++|++++++.. ..++++|+++.++|++ |.+ +++++|.++|++||+++|+|+++.. +..+..
T Consensus 159 ~~~~~~~~~d~~~le~~i~~~~--~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~ 236 (467)
T 1ax4_A 159 TYDDWKGDFDIKKLKENIAQHG--ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKA 236 (467)
T ss_dssp SCCTTTTCBCHHHHHHHHHHHC--GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHH
T ss_pred ccCCcccccCHHHHHHHHHhcC--CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccc
Confidence 146799999999997531 1257899999999999 665 5578999999999999999998765 221000
Q ss_pred ----chhhhhcCC-----CCccEEEECCccccCCCCceEEEEEecc-chhh
Q psy14299 144 ----KYSFVLKGI-----NRANSVSWNPHKMLGAPLQCSILLIKEK-GLLH 184 (448)
Q Consensus 144 ----~~~~~~~~~-----~~aD~~~~s~hK~l~~P~g~G~l~vr~~-~~~~ 184 (448)
.....+..+ ..+|++++++||+++.|.| |+++.+++ ++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~d~~~l~~ 286 (467)
T 1ax4_A 237 RDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIG-GLVAIRDNEEIFT 286 (467)
T ss_dssp HCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC-EEEEESSCHHHHH
T ss_pred cccccCCCchhhhhhhhccccceEEEeccccCCCCcc-eEEEeCCHHHHHH
Confidence 000000000 2368999999999988755 66655535 4443
No 140
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.80 E-value=5.8e-18 Score=170.57 Aligned_cols=280 Identities=15% Similarity=0.093 Sum_probs=172.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC----------CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG----------MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~----------~~~v~~v~~~ 73 (448)
..+||+|||++|..++..++.+.. ...|.+ ..++.|++...+|++....+...+.. ...+..++.+
T Consensus 95 ~v~~~~~gt~a~~~al~~~~~~~~---~~~~~~-~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (392)
T 3ruy_A 95 MVLPMNTGAEAVETAIKTARRWAY---DVKKVE-ANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYG 170 (392)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHH---HTSCCC-TTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTT
T ss_pred EEEEeCcHHHHHHHHHHHHHHhhh---hccCCC-CCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcc
Confidence 578999999999999987765300 111221 12446777777776555554433221 0124445543
Q ss_pred CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccchhhhh
Q psy14299 74 ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVL 149 (448)
Q Consensus 74 ~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~ 149 (448)
|+++|++++++ ++++|++++++|++|.+.| +++|.++|++||+++|+|++|+.............
T Consensus 171 -----d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~ 239 (392)
T 3ruy_A 171 -----DLEALKAAITP------NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDW 239 (392)
T ss_dssp -----CHHHHHHHCCT------TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGG
T ss_pred -----cHHHHHHHhcc------CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhc
Confidence 89999999863 5889999999999999998 99999999999999999999963211111111111
Q ss_pred cCCCCccEEEECCccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHH
Q psy14299 150 KGINRANSVSWNPHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWK 228 (448)
Q Consensus 150 ~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (448)
.++ ..|++++| |++++. ...|+++.++ ++..........+ .+ ....+.
T Consensus 240 ~~~-~~d~~~~S--K~l~gG~~~~G~~~~~~-~~~~~~~~~~~~~---------------~~------~~~~~~------ 288 (392)
T 3ruy_A 240 DNV-TPDMYILG--KALGGGVFPISCAAANR-DILGVFEPGSHGS---------------TF------GGNPLA------ 288 (392)
T ss_dssp GTC-CCSEEEEC--GGGGTTTSCCEEEEECH-HHHTTCCTTSSCC---------------SS------TTCHHH------
T ss_pred cCC-CCCEEEEc--hhhhCChhhhEEEEECH-HHHhhhccCCcCC---------------CC------CCCHHH------
Confidence 122 36888775 987652 3478877755 3332221100000 00 000111
Q ss_pred HhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHH
Q psy14299 229 ARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMW 308 (448)
Q Consensus 229 ~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (448)
+..+..++
T Consensus 289 ------------------------------------------------------------------------~~a~~~~l 296 (392)
T 3ruy_A 289 ------------------------------------------------------------------------CAVSIAAL 296 (392)
T ss_dssp ------------------------------------------------------------------------HHHHHHHH
T ss_pred ------------------------------------------------------------------------HHHHHHHH
Confidence 11111122
Q ss_pred HHhcCccHHHHHHHHHHHHHHHHHHhhcC--CCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHH
Q psy14299 309 KARGNLGFRHFVDNAVDCSRYFLSQISQR--PGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV 386 (448)
Q Consensus 309 ~~~~~~G~~~~~~~~~~l~~~~~~~L~~~--pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~ 386 (448)
+.... +++.++..++++++.+.|+++ |.+... ++..+++.+.+ +. . ..++.+.|.
T Consensus 297 ~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~g~~~~~~~-~~--~---------------~~~l~~~l~ 353 (392)
T 3ruy_A 297 EVLEE---EKLTERSLQLGEKLVGQLKEIDNPMITEV--RGKGLFIGIEL-NE--P---------------ARPYCEQLK 353 (392)
T ss_dssp HHHHH---TTHHHHHHHHHHHHHHHHTTCCCTTEEEE--EEETTEEEEEE-SS--C---------------SHHHHHHHH
T ss_pred HHHHh---hhHHHHHHHHHHHHHHHHHHhcCCCceEE--EeeeeEEEEEE-cc--h---------------HHHHHHHHH
Confidence 22111 346677888899999999987 335443 23445555543 21 1 237888999
Q ss_pred hCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHH
Q psy14299 387 LGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRG 433 (448)
Q Consensus 387 ~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~ 433 (448)
++| +.+.+. + ++++|+++ +..+|++|+++++++|+++.
T Consensus 354 ~~g-i~v~~~---~---~~~iRi~~--~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 354 AAG-LLCKET---H---ENVIRIAP--PLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp TTT-EECCCB---T---TTEEEECC--CTTCCHHHHHHHHHHHHHHH
T ss_pred HCC-cEEecC---C---CCEEEEEC--CCCCCHHHHHHHHHHHHHHh
Confidence 999 555442 1 27999999 67899999999999998864
No 141
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.80 E-value=1.4e-17 Score=170.10 Aligned_cols=157 Identities=17% Similarity=0.168 Sum_probs=115.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+++++..++.+... +++.|+++...|.++...++..|. +++.+|.++++ +|+++|
T Consensus 110 ~i~~t~G~~~al~~~~~~l~~--------------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~-~d~~~l 171 (425)
T 2r2n_A 110 DLCVTSGSQQGLCKVFEMIIN--------------PGDNVLLDEPAYSGTLQSLHPLGC---NIINVASDESG-IVPDSL 171 (425)
T ss_dssp EEEEESSHHHHHHHHHHHHCC--------------TTCEEEEESSCCHHHHHHHGGGTC---EEEEECEETTE-ECHHHH
T ss_pred cEEEeCcHHHHHHHHHHHhCC--------------CCCEEEEeCCCcHHHHHHHHHcCC---EEEEeCcCCCC-CCHHHH
Confidence 689999999999888877643 567899999999999999998888 78889887654 899999
Q ss_pred HHHHHHhh------hcCCCcEEEEE-eccCCccccccCHH---HHHHHHHHcCCEEEEecccccccccccch-h-hhhcC
Q psy14299 84 EQTIQTSL------AEKKIPLFVNA-TAGTTVLGAFDPLD---EIATVCEKYDLWMHVDACWGGSLIFSEKY-S-FVLKG 151 (448)
Q Consensus 84 e~~l~~~~------~~~~~~~lVv~-~~~~t~tG~~~~l~---~I~~ia~~~g~~l~VD~A~~~~~~~~~~~-~-~~~~~ 151 (448)
++++++.. ....++++|++ .+++|+||.+.|.+ +|.++|++||+++++|++|+...+..... . ..+.
T Consensus 172 ~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~- 250 (425)
T 2r2n_A 172 RDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMD- 250 (425)
T ss_dssp HHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGC-
T ss_pred HHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccC-
Confidence 99996311 00124677766 58899999998765 99999999999999999998543311100 0 0011
Q ss_pred CCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 152 INRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 152 ~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
....++++.+++|+++ |. .+|+++++++
T Consensus 251 ~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~ 279 (425)
T 2r2n_A 251 VDGRVIRADSFSKIIS-SGLRIGFLTGPKP 279 (425)
T ss_dssp TTSCEEEEEESTTTTC-STTCCEEEEEEHH
T ss_pred CCCCEEEEccchhhcc-CccceEEEecCHH
Confidence 1123577889999997 42 3688887653
No 142
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.80 E-value=5.7e-18 Score=173.78 Aligned_cols=156 Identities=14% Similarity=0.135 Sum_probs=111.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC-CCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE-RGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~-~g~id~e~ 82 (448)
..+++++||+++.+++.++..... .+.++ .+++.|+++..+|.++..+++..|. +++.++.++ ++.+|+++
T Consensus 79 ~~i~~~sGt~a~~~al~~l~~~~~---~~~~~--~~gd~Vi~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~d~~~ 150 (437)
T 3bb8_A 79 YVLTTTSGSSANLLALTALTSPKL---GVRAL--KPGDEVITVAAGFPTTVNPTIQNGL---IPVFVDVDIPTYNVNASL 150 (437)
T ss_dssp EEEEESCHHHHHHHHHHHTTCGGG---GGGSC--CTTCEEEECSSSCHHHHHHHHHTTC---EEEECCEETTTTEECGGG
T ss_pred cEEEeCCHHHHHHHHHHHhhhccc---ccccC--CCcCEEEECCCCcHHHHHHHHHcCC---EEEEEeccCccCCcCHHH
Confidence 478999999999988877531000 00001 2567899999999999999999888 788888876 78999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNP 162 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~ 162 (448)
|++++++ ++++|++++ ++|...|+++|.++|+++|+++|+|+||+.+... +... . + ...|+++.++
T Consensus 151 l~~~i~~------~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~--~-~-~~~d~~~~s~ 216 (437)
T 3bb8_A 151 IEAAVSD------KTKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTY-DGKM--A-G-TFGDIGTVSF 216 (437)
T ss_dssp HHHHCCT------TEEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE-TTEE--T-T-SSSSEEEEEC
T ss_pred HHHhcCC------CCeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECccccCceE-CCee--c-c-cccCEEEEEC
Confidence 9999854 478888876 4788899999999999999999999999977654 2111 1 1 1257877664
Q ss_pred ccccCCCCceEEEEEeccc
Q psy14299 163 HKMLGAPLQCSILLIKEKG 181 (448)
Q Consensus 163 hK~l~~P~g~G~l~vr~~~ 181 (448)
+|....|.|.|.+++.++.
T Consensus 217 ~~~k~l~~g~gg~~~~~~~ 235 (437)
T 3bb8_A 217 YPAKHITMGEGGAVFTQSA 235 (437)
T ss_dssp STTSSSCCSSCEEEEESCH
T ss_pred cCCcCCCCCCeEEEEeCCH
Confidence 3322224344444444543
No 143
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.80 E-value=2.1e-18 Score=175.40 Aligned_cols=153 Identities=12% Similarity=0.009 Sum_probs=117.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC---------
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--------- 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--------- 74 (448)
..++|+|||+++..++..+.. +++.|+++...|.++...++..|. +++.+|.++
T Consensus 93 ~i~~~~g~~~a~~~~~~~~~~--------------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~G~~~ 155 (422)
T 3fvs_A 93 NVLVTVGGYGALFTAFQALVD--------------EGDEVIIIEPFFDCYEPMTMMAGG---RPVFVSLKPGPIQNGELG 155 (422)
T ss_dssp HEEEESHHHHHHHHHHHHHCC--------------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECBCCCCCSSSCC
T ss_pred cEEEECChHHHHHHHHHHHcC--------------CCCEEEEcCCCchhhHHHHHHcCC---EEEEEecccccccccccc
Confidence 589999999999888877633 566788898999999999999988 788898875
Q ss_pred ---CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccccc---CHHHHHHHHHHcCCEEEEecccccccccccchhh-
Q psy14299 75 ---RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFD---PLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF- 147 (448)
Q Consensus 75 ---~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~---~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~- 147 (448)
++.+|+++|++++++ ++++|++++++|++|.+. ++++|.++|++||+++++|++|+...........
T Consensus 156 ~~~~~~~d~~~l~~~~~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 229 (422)
T 3fvs_A 156 SSSNWQLDPMELAGKFTS------RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISI 229 (422)
T ss_dssp BGGGSBCCHHHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCG
T ss_pred cccCCCCCHHHHHhhcCC------CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCCh
Confidence 336899999998854 578999999999999988 5999999999999999999999864432110000
Q ss_pred -hhcCCCCccEEEECCccccCCC-CceEEEEEec
Q psy14299 148 -VLKGINRANSVSWNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 148 -~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~ 179 (448)
........++++.+++|+++.| ..+|+++.++
T Consensus 230 ~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~ 263 (422)
T 3fvs_A 230 ASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD 263 (422)
T ss_dssp GGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCH
T ss_pred hhcccccCcEEEEecchhccCCccceEEEEEeCH
Confidence 0111112457788999999744 4578776644
No 144
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.80 E-value=7.7e-18 Score=165.75 Aligned_cols=265 Identities=12% Similarity=0.030 Sum_probs=178.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+|+++..++... +++.|+++...|.++...++..|. +++.+|.++++.+|+++|
T Consensus 70 ~i~~t~G~~~~l~~~~~~~----------------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l 130 (337)
T 3p1t_A 70 NLMLVRGIDECFDRISAEF----------------SSMRFVTAWPGFDGYRARIAVSGL---RHFEIGLTDDLLLDPNDL 130 (337)
T ss_dssp GEEEESHHHHHHHHHHHHS----------------TTSEEEEESSSCSHHHHHHTTSCC---EEEEECBCTTSSBCHHHH
T ss_pred HEEEeCCHHHHHHHHHHhc----------------CCCeEEEeCCCcHHHHHHHHHcCC---EEEEecCCCCCCCCHHHH
Confidence 5789999999987776553 234688899999999999988888 799999988889999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
+++. +++++++++++|++|.+.|++++.++|+++++ +++|++|+........ .......++++.|++
T Consensus 131 ~~~~--------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~----~~~~~~~~i~~~S~s 197 (337)
T 3p1t_A 131 AQVS--------RDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRAR----GLAYGENELVFRSFS 197 (337)
T ss_dssp TTCC--------TTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSCSSS----CCCCBTTEEEEEESS
T ss_pred Hhhc--------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhcccccc----ccccCCCEEEEeeCc
Confidence 8751 46899999999999999999999999999997 6679998843221110 011223578899999
Q ss_pred cccC-CCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHHHh
Q psy14299 164 KMLG-APLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDNA 242 (448)
Q Consensus 164 K~l~-~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~~~ 242 (448)
|+++ ...++|+++.++ ++.......... . . ...+...+
T Consensus 198 K~~g~~G~r~G~~~~~~-~~~~~l~~~~~~-~-~---------------------~~~~~~~a----------------- 236 (337)
T 3p1t_A 198 KSYGLAGLRLGALFGPS-ELIAAMKRKQWF-C-N---------------------VGTLDLHA----------------- 236 (337)
T ss_dssp STTCCTTTCCEEEECCH-HHHHHHHTTSCT-T-C---------------------SCHHHHHH-----------------
T ss_pred hhccCcchheEEEEeCH-HHHHHHHhhcCC-C-C---------------------CCHHHHHH-----------------
Confidence 9997 335668776643 333332211000 0 0 00000000
Q ss_pred hhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHHHH
Q psy14299 243 VDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVDN 322 (448)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 322 (448)
+..+++. .+.+++..++
T Consensus 237 -------------------------------------------------------------~~~~l~~--~~~~~~~~~~ 253 (337)
T 3p1t_A 237 -------------------------------------------------------------LEAALDN--DRAREAHIAK 253 (337)
T ss_dssp -------------------------------------------------------------HHHHHTC--HHHHHHHHHH
T ss_pred -------------------------------------------------------------HHHHhCC--HHHHHHHHHH
Confidence 0011110 1224455666
Q ss_pred HHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEeeecCCcc
Q psy14299 323 AVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGYQPLQHRN 402 (448)
Q Consensus 323 ~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~ 402 (448)
..++++++.+.|+++ |+++. ++..+.+.+.. + . ...+.+.|.++| +.+.++...+.
T Consensus 254 ~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~-~---~---------------~~~~~~~l~~~g-i~v~~g~~~~~- 309 (337)
T 3p1t_A 254 TLAQRRRVADALRGL-GYRVA--SSEANFVLVEN-A---A---------------GERTLRFLRERG-IQVKDAGQFGL- 309 (337)
T ss_dssp HHHHHHHHHHHHHHT-TCCBC--CCSSSEEEEEC-T---T---------------THHHHHHHHHTT-EECEEGGGGTC-
T ss_pred HHHHHHHHHHHHHHC-cCEEC--CCCCeEEEEEc-C---C---------------HHHHHHHHHHCC-eEEEECccCCC-
Confidence 677788999999998 88764 44555554432 1 1 125677888888 55555443332
Q ss_pred cccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 403 LHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 403 ~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
++++|+|++ +++|+++++++|+++.+
T Consensus 310 -~~~iRis~~-----~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 310 -HHHIRISIG-----REEDNDRLLAALAEYSD 335 (337)
T ss_dssp -CSEEEEECC-----CHHHHHHHHHHHHHHTC
T ss_pred -CCeEEEecC-----CHHHHHHHHHHHHHHhh
Confidence 479999993 79999999999998753
No 145
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.80 E-value=1.5e-17 Score=169.41 Aligned_cols=160 Identities=13% Similarity=0.040 Sum_probs=116.2
Q ss_pred cEEEeCcHHHHHH--HHHHHHHH--hcCCcccccCC--CC-CCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCC
Q psy14299 4 KPFLLPGGSISNM--YSICLARY--RLDPDTKRKGL--SH-LPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERG 76 (448)
Q Consensus 4 ~g~~t~ggT~an~--~al~~a~~--~~~~~~~~~G~--~~-~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g 76 (448)
..++|+|+|+++. +++.+... + |- ++ .+++.|+++...|..+...++..|. +++.+|.++++
T Consensus 89 ~i~~t~G~~~al~~~~~~~~l~~~~~--------g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~g 157 (423)
T 3ez1_A 89 NVLVWNNSSLELQGLVLTFALLHGVR--------GSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGF---ELLTVDMQSDG 157 (423)
T ss_dssp GEEECSSCHHHHHHHHHHHHHHTCCT--------TCSSCGGGGCCEEEEEESCCHHHHHHHHHHTC---EEEEEEEETTE
T ss_pred hEEEeCCcHHHHHHHHHHHHHhccCC--------CccccccCCCCEEEEcCCCcHHHHHHHHHcCC---EEEeccCCCCC
Confidence 5789999999986 66665544 2 00 00 0046789999999999999999998 78899988765
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEe-ccCCccccccCHH---HHHHHH-HHcCCEEEEecccccccccc-c-----ch
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNAT-AGTTVLGAFDPLD---EIATVC-EKYDLWMHVDACWGGSLIFS-E-----KY 145 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~-~~~t~tG~~~~l~---~I~~ia-~~~g~~l~VD~A~~~~~~~~-~-----~~ 145 (448)
+|+++|++++++ ..++++|+++ +++|+||.+.|.+ +|+++| ++||+++++|++|+...+.. . ..
T Consensus 158 -~d~~~l~~~l~~----~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~ 232 (423)
T 3ez1_A 158 -PDVDAVERLAGT----DPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNF 232 (423)
T ss_dssp -ECHHHHHHHHHS----CTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCH
T ss_pred -CCHHHHHHHHhh----CCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcch
Confidence 999999999962 1357788655 7899999998877 888888 99999999999998533221 0 00
Q ss_pred hhhh--cCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 146 SFVL--KGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 146 ~~~~--~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
.... .+....++++.+++|+++...++|+++.++
T Consensus 233 ~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~ 268 (423)
T 3ez1_A 233 VVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSE 268 (423)
T ss_dssp HHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECH
T ss_pred hhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCH
Confidence 0000 012235688899999866667788877754
No 146
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.80 E-value=2.2e-17 Score=167.94 Aligned_cols=142 Identities=10% Similarity=0.023 Sum_probs=118.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHH----HHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLK----AAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~----~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..++++||++++..++.+..+ +++.|+++...|.++.. .++..|. +++.++.+ |
T Consensus 79 ~~i~~~~g~~ai~~~~~~l~~--------------~gd~Vl~~~~~y~~~~~~~~~~~~~~g~---~~~~v~~~-----d 136 (404)
T 1e5e_A 79 ACVATSSGMGAIAATVLTILK--------------AGDHLISDECLYGCTHALFEHALTKFGI---QVDFINTA-----I 136 (404)
T ss_dssp EEEEESSHHHHHHHHHHHHCC--------------TTCEEEEESCCCHHHHHHHHTHHHHTTC---EEEEECTT-----S
T ss_pred cEEEeCChHHHHHHHHHHHhC--------------CCCEEEEeCCCchhHHHHHHHHHHHcCC---EEEEECCC-----C
Confidence 468899999998888776533 56778999999999888 6777787 78888875 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHH-cCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEK-YDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~-~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
+++|++++++ ++++|++++++|++|.+.|+++|+++|++ ||+++++|++|+.+....+. . . .+|++
T Consensus 137 ~~~l~~~i~~------~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~-~-----~-~~di~ 203 (404)
T 1e5e_A 137 PGEVKKHMKP------NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPV-D-----F-GVDVV 203 (404)
T ss_dssp TTHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGG-G-----G-TCSEE
T ss_pred HHHHHHhcCC------CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCcc-c-----c-CCEEE
Confidence 8999998854 58899999999999999999999999999 99999999999987643211 1 1 47999
Q ss_pred EECCccccCCCCc--eEEEEEecc
Q psy14299 159 SWNPHKMLGAPLQ--CSILLIKEK 180 (448)
Q Consensus 159 ~~s~hK~l~~P~g--~G~l~vr~~ 180 (448)
+.|+||++++|.+ +|+++++++
T Consensus 204 ~~S~sK~~~~~g~ri~G~~~~~~~ 227 (404)
T 1e5e_A 204 VHSATKYINGHTDVVAGLICGKAD 227 (404)
T ss_dssp EEETTTTTTCSSCCCCEEEEECHH
T ss_pred EEcCccccCCCCCCeEEEEEECHH
Confidence 9999999999987 688887654
No 147
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.79 E-value=6.3e-18 Score=172.94 Aligned_cols=140 Identities=10% Similarity=0.030 Sum_probs=113.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEE-ecCCCCCc
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRV-KTNERGQM 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v-~~~~~g~i 78 (448)
..+++++||+|+..++.++.. +++.|+++..+|.+....+ +..|+ +++.+ +.+
T Consensus 75 ~~v~~~sGt~A~~~~l~~~~~--------------~gd~vi~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~----- 132 (421)
T 2ctz_A 75 AALATASGHAAQFLALTTLAQ--------------AGDNIVSTPNLYGGTFNQFKVTLKRLGI---EVRFTSREE----- 132 (421)
T ss_dssp EEEEESSHHHHHHHHHHHHCC--------------TTCEEEECSCCCHHHHHHHHTHHHHTTC---EEEECCTTC-----
T ss_pred ceEEecCHHHHHHHHHHHHhC--------------CCCEEEEeCCCchHHHHHHHHHHHHcCC---EEEEECCCC-----
Confidence 357788889999988876532 5678999999999988876 56677 67777 654
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEeccc-ccccccccchhhhhcCCCCccE
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACW-GGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~-~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
|+++|++++++ ++++|++++++|++|.+.|+++|.++|++||+++++|++| +.+.. .... +. .+|+
T Consensus 133 d~~~l~~~i~~------~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~-~~~~-----~~-~~Di 199 (421)
T 2ctz_A 133 RPEEFLALTDE------KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYL-LRPL-----AW-GAAL 199 (421)
T ss_dssp CHHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTS-CCGG-----GG-TCSE
T ss_pred CHHHHHHhhcc------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccc-CCcc-----cc-CCeE
Confidence 89999999864 5889999999999999999999999999999999999999 76642 1111 11 4799
Q ss_pred EEECCccccCCCCc-eEEEEEe
Q psy14299 158 VSWNPHKMLGAPLQ-CSILLIK 178 (448)
Q Consensus 158 ~~~s~hK~l~~P~g-~G~l~vr 178 (448)
++.|+||++++|.+ .|.++++
T Consensus 200 ~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 200 VTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp EEEETTTTTTCSSCCCCEEEEE
T ss_pred EEECCcccccCCCCcEEEEEEe
Confidence 99999999999874 6777775
No 148
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.79 E-value=4.6e-18 Score=171.55 Aligned_cols=152 Identities=15% Similarity=0.093 Sum_probs=115.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC-CCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN-ERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~-~~g~id~e~ 82 (448)
.+++|+|||+++.+++.++.- .+++.|+++..+|.++..++...|. +++.++++ +++.+|+++
T Consensus 55 ~~v~~~sgt~al~~al~~l~~-------------~~Gd~Vi~~~~~~~~~~~~~~~~G~---~~~~v~~~~~~~~~d~~~ 118 (377)
T 3ju7_A 55 AVTTVANATLGLMAAIQLKKR-------------KKGKYALMPSFTFPATPLAAIWCGL---EPYFIDISIDDWYMDKTV 118 (377)
T ss_dssp EEEEESCHHHHHHHHHHHHSC-------------TTCCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTTTCSBCHHH
T ss_pred eEEEeCCHHHHHHHHHHHcCC-------------CCcCEEEECCCCcHHHHHHHHHcCC---EEEEEecCCccCCcCHHH
Confidence 579999999999988876522 2678899999999999999999998 78899987 468999999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhh-cCCCCccEEEEC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVL-KGINRANSVSWN 161 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~-~~~~~aD~~~~s 161 (448)
|++++.... .++++|+ +++++|...|+++|.++|+ ||+++|+|++|+.+....... + .....+++++++
T Consensus 119 l~~~i~~~~---~~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~---~g~~~~d~~~~S~~ 188 (377)
T 3ju7_A 119 LWDKIEELK---EEVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMH---YGQDFSGMIIYSFH 188 (377)
T ss_dssp HHHHHHHHG---GGEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEE---TTTTCSSEEEEECB
T ss_pred HHHHHhcCC---CCceEEE---EECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEe---ccCCCCcEEEEECC
Confidence 999984311 1367776 4557899999999999999 999999999998776532110 1 111234566666
Q ss_pred CccccCCCCceEEEEEeccch
Q psy14299 162 PHKMLGAPLQCSILLIKEKGL 182 (448)
Q Consensus 162 ~hK~l~~P~g~G~l~vr~~~~ 182 (448)
+||++++ ...|+++.+++++
T Consensus 189 ~~K~l~~-g~gG~~~~~~~~l 208 (377)
T 3ju7_A 189 ATKPFGI-GEGGLIYSKNEED 208 (377)
T ss_dssp TTSSSCC-BSCEEEEESCHHH
T ss_pred CCCcCCC-CCcEEEEECCHHH
Confidence 8999987 4566666666544
No 149
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.79 E-value=2.6e-17 Score=166.24 Aligned_cols=156 Identities=18% Similarity=0.154 Sum_probs=108.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.++||+|||+++..++.+++.... .|-+ .++.+|+.+...|.+...+++..|... ..+..+|.+
T Consensus 99 ~v~~~~gg~~a~~~al~~~~~~~~-----~~~~-~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~- 171 (397)
T 2ord_A 99 KVFFANTGTEANEAAIKIARKYGK-----KKSE-KKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFN- 171 (397)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHH-----HHCT-TCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTT-
T ss_pred eEEEeCCHHHHHHHHHHHHHHHhh-----cCCC-CCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecCC-
Confidence 478999999999999887764100 0000 134566666777887777777777620 016666653
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccc----ccCHHHHHHHHHHcCCEEEEecccccccccccc-hhhhh
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA----FDPLDEIATVCEKYDLWMHVDACWGGSLIFSEK-YSFVL 149 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~----~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~-~~~~~ 149 (448)
|+++|++++++ ++++|++++++|++|. .+++++|.++|++||+++++|++|+. ...... .....
T Consensus 172 ----d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~-~~~~g~~~~~~~ 240 (397)
T 2ord_A 172 ----NVEDLRRKMSE------DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCG-MGRTGKLFAYQK 240 (397)
T ss_dssp ----CHHHHHHHCCT------TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTT-TTTTSSSSHHHH
T ss_pred ----CHHHHHHHhhc------CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccC-CccCccchhhhh
Confidence 89999998853 5889999999999998 47899999999999999999999973 221111 11111
Q ss_pred cCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 150 KGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 150 ~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
.+. ..|++++ +|+++++..+|+++++++
T Consensus 241 ~~~-~~d~~s~--sK~~~~G~r~G~~~~~~~ 268 (397)
T 2ord_A 241 YGV-VPDVLTT--AKGLGGGVPIGAVIVNER 268 (397)
T ss_dssp HTC-CCSEEEE--CGGGGTTSCCEEEEECST
T ss_pred hCC-CCCeeee--ccccCCCcCeEEEEEchH
Confidence 122 2687755 799997667999888664
No 150
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.79 E-value=2.5e-18 Score=172.03 Aligned_cols=151 Identities=11% Similarity=-0.001 Sum_probs=114.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCC--CeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLP--PLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~--~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
..++|+|||+++..++.+... + ++.|+++...|.++...++..|. +++.+|.++++.+++
T Consensus 84 ~i~~t~g~~~al~~~~~~~~~--------------~~~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~- 145 (376)
T 3ezs_A 84 ELISTLGSREVLFNFPSFVLF--------------DYQNPTIAYPNPFYQIYEGAAKFIKA---KSLLMPLTKENDFTP- 145 (376)
T ss_dssp GEEEESSSHHHHHHHHHHHTT--------------TCSSCEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGGTSCC-
T ss_pred HEEECcCcHHHHHHHHHHHcC--------------CCCCCEEEEecCCcHhHHHHHHHcCC---EEEEcccCCCCCcch-
Confidence 578999999999988877644 4 67889999999999999999998 799999887766666
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhh--hhc----CC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF--VLK----GI 152 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~--~~~----~~ 152 (448)
++++++.+ ++++|++++++|++|.+.| +++|.++|++||+++++|++|+........... ... ..
T Consensus 146 ~l~~~~~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (376)
T 3ezs_A 146 SLNEKELQ------EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEA 219 (376)
T ss_dssp CCCHHHHH------HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTT
T ss_pred hHHhhhcc------CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccc
Confidence 77777765 3678999999999999877 677778899999999999999875542111110 000 01
Q ss_pred CCccEEEECCccccCCC-CceEEEEEe
Q psy14299 153 NRANSVSWNPHKMLGAP-LQCSILLIK 178 (448)
Q Consensus 153 ~~aD~~~~s~hK~l~~P-~g~G~l~vr 178 (448)
...++++.+++|+++.| ..+|+++.+
T Consensus 220 ~~~~i~~~s~sK~~g~~G~r~G~~~~~ 246 (376)
T 3ezs_A 220 FKNVLVIHSLSKRSSAPGLRSGFIAGD 246 (376)
T ss_dssp CTTEEEEEESTTTTTCGGGCCEEEEEC
T ss_pred cCcEEEEecchhccCCccceeEEEeeC
Confidence 23578899999999643 456777653
No 151
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.79 E-value=3.2e-18 Score=170.12 Aligned_cols=154 Identities=13% Similarity=0.105 Sum_probs=109.7
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH---HHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA---AHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~---~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
.++++|||+++.+++.++..+ .+..+|+++...|.+.... +...|. +++.++. +++.+|++
T Consensus 66 ~i~~~~g~~a~~~a~~~~~~~------------g~~~vvi~~~~~~~~~~~~~~~~~~~g~---~~~~v~~-~~~~~d~~ 129 (359)
T 3pj0_A 66 AVFFPSGTMAQQIALRIWADR------------KENRRVAYHPLSHLEIHEQDGLKELQQI---TPLLLGT-ANQLLTID 129 (359)
T ss_dssp EEEESCHHHHHHHHHHHHHHH------------HTCCEEEECTTCHHHHSSTTHHHHHHCC---EEEECSC-TTSCCCHH
T ss_pred EEEeCCHHHHHHHHHHHHHhc------------CCCcEEEEeccceeeehhcchHHHhcCc---eEEecCC-cCCCcCHH
Confidence 478899999999998887765 1333577788888776532 245677 7888886 57899999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCcc-ccccCHHHH---HHHHHHcCCEEEEeccccccccccc-chhhhhcCCCCcc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVL-GAFDPLDEI---ATVCEKYDLWMHVDACWGGSLIFSE-KYSFVLKGINRAN 156 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~t-G~~~~l~~I---~~ia~~~g~~l~VD~A~~~~~~~~~-~~~~~~~~~~~aD 156 (448)
+|+++ . .++++|+++.++|++ |.+.|.+++ .++|++||+++|+|++|..+..... .....+. ..+|
T Consensus 130 ~l~~~-~------~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d 200 (359)
T 3pj0_A 130 DIKSL-R------EPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC--ALFD 200 (359)
T ss_dssp HHHTC-S------SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH--TTCS
T ss_pred HHHhc-c------CCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh--ccCC
Confidence 99887 2 357899999888877 688775555 9999999999999999875543111 0011111 2468
Q ss_pred EEEECCccccCCCCceEEEEEeccchhhh
Q psy14299 157 SVSWNPHKMLGAPLQCSILLIKEKGLLHQ 185 (448)
Q Consensus 157 ~~~~s~hK~l~~P~g~G~l~vr~~~~~~~ 185 (448)
++++++||++++|.| |+++. ++++...
T Consensus 201 ~~~~s~sK~~~~~~g-g~~~~-~~~l~~~ 227 (359)
T 3pj0_A 201 SVYVSFYKGIGGIAG-AILAG-NDDFVQE 227 (359)
T ss_dssp EEEEESSSTTCCSSC-EEEEE-CHHHHHH
T ss_pred EEEEeccccCCCcce-EEEEC-CHHHHHH
Confidence 999999999999966 65554 4444433
No 152
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.79 E-value=3.5e-18 Score=169.86 Aligned_cols=152 Identities=13% Similarity=0.088 Sum_probs=110.5
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHH---HHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLK---AAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~---~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
.++++|||+++.+++.++..+ .++.+|+++...|++... .+...|. +++.++. +++.+|++
T Consensus 65 ~i~~~~G~~a~~~al~~~~~~------------gd~~~vi~~~~~~~~~~~~~~~~~~~g~---~~~~v~~-~~~~~d~~ 128 (357)
T 3lws_A 65 AVFFPSGTMAQQVALRIWSDE------------TDNRTVAYHPLCHLEIHEQDGLKELHPI---ETILVGA-ADRLMTLD 128 (357)
T ss_dssp EEEESCHHHHHHHHHHHHHHH------------HTCCEEEECTTCHHHHSSTTHHHHHSSC---EEEECSC-TTSCCCHH
T ss_pred EEEecCcHHHHHHHHHHHhhc------------CCCcEEEecccceeeeeccchhhhccCc---EEEEecC-CCCCcCHH
Confidence 578899999999988877764 122278889899988765 3445566 6777774 56789999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCcc-ccccC---HHHHHHHHHHcCCEEEEecccccccccc--cchhhhhcCCCCc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVL-GAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFS--EKYSFVLKGINRA 155 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~t-G~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~--~~~~~~~~~~~~a 155 (448)
+|+++. ++++|+++.++|++ |.+.| +++|.++|++||+++|+|+||..+.... ....... ..+
T Consensus 129 ~l~~~~--------~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~ 197 (357)
T 3lws_A 129 EIKALP--------DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA---GLF 197 (357)
T ss_dssp HHHTCC--------SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH---TTS
T ss_pred HHhcCc--------CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH---hcC
Confidence 998862 26789999999988 88765 8999999999999999999987322211 1111111 246
Q ss_pred cEEEECCccccCCCCceEEEEEeccchhhh
Q psy14299 156 NSVSWNPHKMLGAPLQCSILLIKEKGLLHQ 185 (448)
Q Consensus 156 D~~~~s~hK~l~~P~g~G~l~vr~~~~~~~ 185 (448)
|.++.++||++++|.| |+++. ++++...
T Consensus 198 d~~~~s~sK~~~~~~g-g~~~~-~~~~~~~ 225 (357)
T 3lws_A 198 DSIYISFYKGLGGIAG-AILAG-PAAFCQT 225 (357)
T ss_dssp SEEEEESSSTTCCSSC-EEEEE-CHHHHHH
T ss_pred CEEEEeccccCCCCce-EEEEc-CHHHHHH
Confidence 8999999999988988 77655 4444433
No 153
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.79 E-value=2e-17 Score=168.88 Aligned_cols=163 Identities=12% Similarity=-0.021 Sum_probs=116.0
Q ss_pred cEEEeCcHHHHHH--HHHHHHHH--hcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNM--YSICLARY--RLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~--~al~~a~~--~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..++|+|+|+++. +++.+... +-.+.... ..+++.|+++..+|.++...++..|. +++.+|.+++| +|
T Consensus 97 ~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~----~~~gd~V~v~~p~y~~~~~~~~~~g~---~~~~v~~~~~g-~d 168 (427)
T 3ppl_A 97 QVLAGDASSLNIMFDVISWSYIFGNNDSVQPWS----KEETVKWICPVPGYDRHFSITERFGF---EMISVPMNEDG-PD 168 (427)
T ss_dssp GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGG----GSSCCEEEEEESCCHHHHHHHHHTTC---EEEEEEEETTE-EC
T ss_pred eEEEeCCcHHHHHHHHHHHHHhccCCccccccc----CCCCCEEEEcCCCcHHHHHHHHHcCC---EEEEeCCCCCC-CC
Confidence 5789999999984 56555544 10000000 00267899999999999999999998 79999998776 99
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEe-ccCCccccccCHH---HHHHHH-HHcCCEEEEecccccccccccc-----hhhhh
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNAT-AGTTVLGAFDPLD---EIATVC-EKYDLWMHVDACWGGSLIFSEK-----YSFVL 149 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~-~~~t~tG~~~~l~---~I~~ia-~~~g~~l~VD~A~~~~~~~~~~-----~~~~~ 149 (448)
+++|++++++ .++++|+++ +++|+||.+.|.+ +|.++| ++||+++|+|++|+...+.... .....
T Consensus 169 ~~~l~~~l~~-----~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 243 (427)
T 3ppl_A 169 MDAVEELVKN-----PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLG 243 (427)
T ss_dssp HHHHHHHTTS-----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHH
T ss_pred HHHHHHHHhc-----CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhh
Confidence 9999999842 257788766 7899999998877 888888 9999999999999864332111 00000
Q ss_pred --cCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 150 --KGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 150 --~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
.+....++++.|++|+++...++|+++..+
T Consensus 244 ~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~ 275 (427)
T 3ppl_A 244 EAAGNPNRFWAFTSTSKITLAGAGVSFFLTSA 275 (427)
T ss_dssp HHTTCTTSEEEEEESTTTSCTTSSCEEEECCH
T ss_pred hccCCCCcEEEEechhhccCcCccEEEEEcCH
Confidence 012235688899999966556788776643
No 154
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.79 E-value=7e-18 Score=169.93 Aligned_cols=156 Identities=10% Similarity=-0.018 Sum_probs=115.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCC-CcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERG-QMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g-~id~e~ 82 (448)
..++|+|||+++..++.+++.+ |-. ..++.|+++...|.++...++..|. +++.+|.++++ .+|+++
T Consensus 93 ~i~~t~g~~~al~~~~~~~~~~--------g~~-~~~d~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~g~~~d~~~ 160 (396)
T 3jtx_A 93 EILPVLGSREALFSFVQTVLNP--------VSD-GIKPAIVSPNPFYQIYEGATLLGGG---EIHFANCPAPSFNPDWRS 160 (396)
T ss_dssp SEEEESSHHHHHHHHHHHHCCC------------CCCCEEEEEESCCHHHHHHHHHTTC---EEEEEECCTTTCCCCGGG
T ss_pred eEEEcCCcHHHHHHHHHHHhCC--------CCc-cCCCEEEEcCCCcHhHHHHHHHcCC---EEEEeecCCCCCccCHHH
Confidence 6899999999998888776442 000 0015788899999999999999998 78899986544 789999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHH---HHHHHHHcCCEEEEecccccccccccchhhhh------cCCC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDE---IATVCEKYDLWMHVDACWGGSLIFSEKYSFVL------KGIN 153 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~---I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~------~~~~ 153 (448)
|++++.+ ++++|++++++|++|.+.|.++ |.++|++||+++++|++|+............. ....
T Consensus 161 l~~~~~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (396)
T 3jtx_A 161 ISEEVWK------RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSR 234 (396)
T ss_dssp SCHHHHH------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCC
T ss_pred HHHhhcc------CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhccccc
Confidence 9999976 4789999999999999977555 99999999999999999987543210000000 0002
Q ss_pred CccEEEECCccccCCC-CceEEEEE
Q psy14299 154 RANSVSWNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 154 ~aD~~~~s~hK~l~~P-~g~G~l~v 177 (448)
..++++.+++|.++.| ..+|+++.
T Consensus 235 ~~~i~~~s~sK~~~~~G~r~G~~~~ 259 (396)
T 3jtx_A 235 QKLLMFTSLSKRSNVPGLRSGFVAG 259 (396)
T ss_dssp TTEEEEEESTTTSSCGGGCCEEEEE
T ss_pred CcEEEEeccccccCCcccceEEEEe
Confidence 3578889999976644 44677655
No 155
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.78 E-value=7.8e-18 Score=173.31 Aligned_cols=157 Identities=11% Similarity=0.035 Sum_probs=113.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCc-hHHHHHHHHhCCCCCcEEEEecCC--------
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSH-YSMLKAAHWLGIGMDNVIRVKTNE-------- 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H-~s~~~~~~~~g~~~~~v~~v~~~~-------- 74 (448)
.+++|+|||+++..++.++.. +++ +++..+| .++..+++..|. +++.++.++
T Consensus 92 ~~~~~~~gt~a~~~al~~l~~--------------~gd--i~~~~~~~~~~~~~~~~~G~---~~~~v~~~~~~~~~~~~ 152 (456)
T 2ez2_A 92 HIVPTHQGRGAENLLSQLAIK--------------PGQ--YVAGNMYFTTTRYHQEKNGA---VFVDIVRDEAHDAGLNI 152 (456)
T ss_dssp EEEEESSHHHHHHHHHHHHCC--------------TTC--EEEESSCCHHHHHHHHHTTC---EEEECBCGGGGCTTCCC
T ss_pred cEEEeCCcHHHHHHHHHHhCC--------------CCC--EeccccccchhHHHHHHcCC---EEEEecccccccccccc
Confidence 478999999999998877633 455 4456677 888888898888 788888763
Q ss_pred --CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCC-ccccccC---HHHHHHHHHHcCCEEEEecccccc---------c
Q psy14299 75 --RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTT-VLGAFDP---LDEIATVCEKYDLWMHVDACWGGS---------L 139 (448)
Q Consensus 75 --~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t-~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~---------~ 139 (448)
++.+|+++|++++++.. ...+++|+++.++| ++|.+.| +++|.++|++||+++|+|++|+.| .
T Consensus 153 ~~~~~~d~~~l~~~i~~~t--~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~ 230 (456)
T 2ez2_A 153 AFKGDIDLKKLQKLIDEKG--AENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQ 230 (456)
T ss_dssp SCTTCBCHHHHHHHHHHHC--GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHST
T ss_pred cccCCCCHHHHHHHHHhcc--ccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEcccccccccccccccc
Confidence 26899999999997631 11347888888887 8998876 999999999999999999999874 1
Q ss_pred ccccchh-h---hhcCCCCccEEEECCccccCCCCceEEEEEeccchhh
Q psy14299 140 IFSEKYS-F---VLKGINRANSVSWNPHKMLGAPLQCSILLIKEKGLLH 184 (448)
Q Consensus 140 ~~~~~~~-~---~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~ 184 (448)
....... . ... ...|++++|+||+++.| ..|+++.+++++..
T Consensus 231 ~~~g~~~~~~~~~~~--~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~~ 276 (456)
T 2ez2_A 231 GFENKSIAEIVHEMF--SYADGCTMSGKKDCLVN-IGGFLCMNDDEMFS 276 (456)
T ss_dssp TCTTSCHHHHHHHHH--TTCSEEEEETTTTTCCS-SCEEEEESCHHHHH
T ss_pred ccCCcchhhhhhhhc--ccCCEEEEeCcccCCCC-ceeEEEECCHHHHH
Confidence 1111100 0 011 13588888899987744 46777664554433
No 156
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.78 E-value=5.2e-18 Score=171.69 Aligned_cols=153 Identities=13% Similarity=-0.011 Sum_probs=116.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC----------
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN---------- 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~---------- 73 (448)
..++|+|||+++..++.++.. +++.|+++...|.++...++..|. +++.++.+
T Consensus 87 ~i~~~~g~~~a~~~~~~~~~~--------------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~g~~~~ 149 (410)
T 3e2y_A 87 EILVAVGAYGSLFNSIQGLVD--------------PGDEVIIMVPFYDCYEPMVRMAGA---VPVFIPLRSKPTDGMKWT 149 (410)
T ss_dssp SEEEESHHHHHHHHHHHHHCC--------------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEECCCCSSCCB
T ss_pred CEEEeCCcHHHHHHHHHHhcC--------------CCCEEEEeCCCchhhHHHHHHcCC---EEEEEecccccccccccc
Confidence 689999999999988877643 566788899999999999999988 78888875
Q ss_pred -CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHcCCEEEEecccccccccccchhh--
Q psy14299 74 -ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF-- 147 (448)
Q Consensus 74 -~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~-- 147 (448)
.++.+|+++|++++++ ++++|++++++|++|.+ .++++|+++|++||+++++|++|+...........
T Consensus 150 ~~~~~~d~~~l~~~~~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 223 (410)
T 3e2y_A 150 SSDWTFDPRELESKFSS------KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIA 223 (410)
T ss_dssp GGGEECCHHHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGG
T ss_pred ccCCcCCHHHHHhhcCC------CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHH
Confidence 3457899999998853 58899999999999998 67999999999999999999999865432111000
Q ss_pred hhcCCCCccEEEECCccccCCC-CceEEEEEec
Q psy14299 148 VLKGINRANSVSWNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 148 ~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~ 179 (448)
........++++.+++|+++.| ..+|+++.++
T Consensus 224 ~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~ 256 (410)
T 3e2y_A 224 TLPGMWERTITIGSAGKTFSVTGWKLGWSIGPA 256 (410)
T ss_dssp GSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCH
T ss_pred HcCCccCeEEEEecchhhcCCCCceEEEEEECH
Confidence 0111112347788999999743 4577776644
No 157
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.78 E-value=4.6e-17 Score=162.73 Aligned_cols=154 Identities=18% Similarity=0.153 Sum_probs=103.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCC-eEEEecCCC-chHHHHHHHHhCCCC---------CcEEEEec
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPP-LCMFTSEDS-HYSMLKAAHWLGIGM---------DNVIRVKT 72 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~-~~Vl~~~~~-H~s~~~~~~~~g~~~---------~~v~~v~~ 72 (448)
.+++|+|||+++..++.+++... ..+ .++ +.|++++.+ |.+...+....+... ..+..++.
T Consensus 88 ~v~~~~g~t~a~~~~~~~~~~~~-----~~~---~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (375)
T 2eh6_A 88 KVFFANSGTESVEAAIKLARKYW-----RDK---GKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL 159 (375)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH-----HHT---TCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT
T ss_pred eEEEeCchHHHHHHHHHHHHHHh-----ccC---CCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC
Confidence 57899999999998887643210 000 133 556666555 555554444433210 01344443
Q ss_pred CCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccc-ccccccchhh
Q psy14299 73 NERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGG-SLIFSEKYSF 147 (448)
Q Consensus 73 ~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~-~~~~~~~~~~ 147 (448)
+|+++|++++++ ++++|+++++++++|.+.| +++|.++|++||+++++|++|+. +... .....
T Consensus 160 -----~d~~~l~~~l~~------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~ 227 (375)
T 2eh6_A 160 -----NDIDSVYKLLDE------ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTG-EFYAY 227 (375)
T ss_dssp -----TCHHHHHTTCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS-SSSGG
T ss_pred -----chHHHHHHHhcC------CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCC-cchhh
Confidence 489999988853 5789999999999999988 99999999999999999999993 2211 00111
Q ss_pred hhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 148 VLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 148 ~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
...+. ..|++++| |+++++.++|+++++++
T Consensus 228 ~~~~~-~~d~~s~S--K~~~~g~~~G~~~~~~~ 257 (375)
T 2eh6_A 228 QHFNL-KPDVIALA--KGLGGGVPIGAILAREE 257 (375)
T ss_dssp GGGTC-CCSEEEEC--GGGGTTSCCEEEEEEHH
T ss_pred hhcCC-CCCEEEEc--ccccCCCCeEEEEEcHH
Confidence 11121 36888777 98888888999998763
No 158
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.78 E-value=6e-18 Score=173.82 Aligned_cols=289 Identities=10% Similarity=0.070 Sum_probs=179.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCc----------EEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDN----------VIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~----------v~~v~~~ 73 (448)
..++|+|+++++..+ ..... +++.|+++...|.++...++..|. + ++.+|.+
T Consensus 134 ~i~~t~G~~~al~~~-~~l~~--------------~gd~Vl~~~p~~~~~~~~~~~~g~---~g~~~~~~~~~~~~~~~~ 195 (449)
T 3qgu_A 134 EIFISDGSKCDIARI-QMMFG--------------SKPTVAVQDPSYPVYVDTSVMMGM---TGDHNGTGFDGIEYMVCN 195 (449)
T ss_dssp GEEEESCHHHHHHHH-HHHHC--------------SSSCEEEEESCCTHHHHHHHHHTC---SCCBCSSSBTTEEEEECC
T ss_pred HEEEccCHHHHHHHH-HHHhC--------------CCCEEEEcCCCChhHHHHHHHcCC---cccccccccceeEEEecc
Confidence 578999999997766 44333 566788999999999999999998 5 8888987
Q ss_pred CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccc-hh-hh
Q psy14299 74 ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEK-YS-FV 148 (448)
Q Consensus 74 ~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~-~~-~~ 148 (448)
+++.++++ +++ ..++++|++++++|++|.+.+ +++|+++|++||+++++|++|+........ .. ..
T Consensus 196 ~~~~~~~~-~~~--------~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~ 266 (449)
T 3qgu_A 196 PDNHFFPD-LSK--------AKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYE 266 (449)
T ss_dssp GGGTTCCC-GGG--------CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGG
T ss_pred cccCCcCC-hhH--------cCCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhh
Confidence 65433322 111 135789999999999998866 888889999999999999999975432100 00 01
Q ss_pred hcCCCCccEEEECCccccCC-CCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHH
Q psy14299 149 LKGINRANSVSWNPHKMLGA-PLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMW 227 (448)
Q Consensus 149 ~~~~~~aD~~~~s~hK~l~~-P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (448)
+.+....++++.+++|+++. ...+|+++++++ ..... ...+. ..+...
T Consensus 267 ~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~~~~---~~~~~---------------------------~~~~~~ 315 (449)
T 3qgu_A 267 IPGADEVAIETCSFSKYAGFTGVRLGWTVVPKA-LKYAN---GEPVH---------------------------ADWNRV 315 (449)
T ss_dssp STTGGGTEEEEEECSGGGTCTTCCCEEEECCTT-CBCTT---SCBHH---------------------------HHHHHH
T ss_pred ccCCCCcEEEEecchhhcCCccceeEEEecCHH-HHhhh---hhhHH---------------------------HHHHHH
Confidence 11112357889999999973 356788777543 22110 00000 000000
Q ss_pred HHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHH
Q psy14299 228 KARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLM 307 (448)
Q Consensus 228 ~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (448)
... .+.+.+.+.+.++..+
T Consensus 316 ~~~-------------------------------------------------------------~~~~~~~~~~~a~~~~ 334 (449)
T 3qgu_A 316 MTT-------------------------------------------------------------CFNGASNIVQAGGLAC 334 (449)
T ss_dssp HHH-------------------------------------------------------------SCCCCCHHHHHHHHHH
T ss_pred hhc-------------------------------------------------------------ccCCCCHHHHHHHHHH
Confidence 000 0001111111222222
Q ss_pred HHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHh
Q psy14299 308 WKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVL 387 (448)
Q Consensus 308 ~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~ 387 (448)
++..+.+.++++.++..++++++.+.|+++ |+++. .+.....+.+.+ + +.+ ..++.+.|++
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~-~-~~~---------------~~~~~~~l~~ 395 (449)
T 3qgu_A 335 LQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFSVY-GGDDAPYIWVGF-P-GKP---------------SWDVFAEILE 395 (449)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEE-ESSSSSEEEEEC-T-TSC---------------HHHHHHHHHH
T ss_pred HhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeee-CCCCeeEEEEEC-C-CCC---------------HHHHHHHHHH
Confidence 222222456777888899999999999998 88876 333333333332 2 222 2367788887
Q ss_pred C-CcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 388 G-GTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 388 ~-g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
+ | +.+.++...+...++++|+++. .+++|++++++.|+++.++
T Consensus 396 ~~g-I~v~pg~~f~~~~~~~iRis~~----~~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 396 RCN-IVTTPGSGYGPAGEGFVRASAF----GSRENILEAVRRFKEAYGK 439 (449)
T ss_dssp HHC-EECEEGGGGCGGGTTEEEEECC----SCHHHHHHHHHHHHHHHC-
T ss_pred HCC-EEEecchHhCCCCCCeEEEEec----CCHHHHHHHHHHHHHHHHh
Confidence 6 7 5555554333333489999974 3999999999999988754
No 159
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.9e-18 Score=177.85 Aligned_cols=156 Identities=13% Similarity=0.079 Sum_probs=118.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCC---------
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNE--------- 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~--------- 74 (448)
.+++|+|||+++..++.++.. +++.|+++...|.++...++..|. +++.+|.++
T Consensus 120 ~v~~t~G~~~al~~~~~~l~~--------------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~ 182 (447)
T 3b46_A 120 NVTVTTGANEGILSCLMGLLN--------------AGDEVIVFEPFFDQYIPNIELCGG---KVVYVPINPPKELDQRNT 182 (447)
T ss_dssp GEEEESHHHHHHHHHHHHHCC--------------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEEEECCGGGGTSCB
T ss_pred hEEEeCCHHHHHHHHHHHHcC--------------CCCEEEEeCCCchhHHHHHHHcCC---EEEEEeCCCccccccccc
Confidence 589999999999988877643 567788888999999999999888 788888754
Q ss_pred ---CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHcCCEEEEecccccccccccchhh-
Q psy14299 75 ---RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSF- 147 (448)
Q Consensus 75 ---~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~- 147 (448)
++.+|+++|++++.+ ++++|++++++|++|.+ +++++|+++|++||+++++|++|+...+..+....
T Consensus 183 ~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~ 256 (447)
T 3b46_A 183 RGEEWTIDFEQFEKAITS------KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIA 256 (447)
T ss_dssp CSTTSEECHHHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGG
T ss_pred cccCcccCHHHHHHhhcc------CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHH
Confidence 357999999998853 57899999999999988 46999999999999999999999875431110000
Q ss_pred hh-cCCCCccEEEECCccccCCC-CceEEEEEeccch
Q psy14299 148 VL-KGINRANSVSWNPHKMLGAP-LQCSILLIKEKGL 182 (448)
Q Consensus 148 ~~-~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~~~ 182 (448)
.+ .+....|+++.+++|+++.| ..+|+++.+++++
T Consensus 257 ~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l 293 (447)
T 3b46_A 257 TLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAEL 293 (447)
T ss_dssp GSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHH
T ss_pred HcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHH
Confidence 01 01113689999999998743 2378877734333
No 160
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.77 E-value=3.5e-18 Score=173.94 Aligned_cols=144 Identities=11% Similarity=0.068 Sum_probs=113.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++|++++..++. .. .+++.|+++...|.+....+ +..|+ +++.++.+ |
T Consensus 84 ~~i~~~sG~~ai~~~~~-l~--------------~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~---~v~~v~~~-----d 140 (403)
T 3cog_A 84 YCLAFASGLAATVTITH-LL--------------KAGDQIICMDDVYGGTNRYFRQVASEFGL---KISFVDCS-----K 140 (403)
T ss_dssp EEEEESCHHHHHHHHHT-TS--------------CTTCEEEEESSCCHHHHHHHHHTGGGGTC---EEEEECTT-----S
T ss_pred cEEEECCHHHHHHHHHH-Hh--------------CCCCEEEEeCCCcchHHHHHHHHHHHcCC---EEEEECCC-----C
Confidence 35677788888877765 32 25677889999999866544 34566 78888875 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcC-CEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYD-LWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g-~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
+++|++++++ ++++|++++++|++|.+.|+++|+++|++|| +++++|++|+.+....+. .. .+|++
T Consensus 141 ~~~l~~~i~~------~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~------~~-~~div 207 (403)
T 3cog_A 141 IKLLEAAITP------ETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPL------AL-GADIS 207 (403)
T ss_dssp HHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTT------TT-TCSEE
T ss_pred HHHHHHhcCc------CCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCCcc------cc-CCeEE
Confidence 9999998854 5889999999999999999999999999999 999999999987542111 11 47999
Q ss_pred EECCccccCCCCc--eEEEEEeccchh
Q psy14299 159 SWNPHKMLGAPLQ--CSILLIKEKGLL 183 (448)
Q Consensus 159 ~~s~hK~l~~P~g--~G~l~vr~~~~~ 183 (448)
+.|+||++++|.+ .|+++.+++.+.
T Consensus 208 ~~S~sK~~~g~~~~~~G~v~~~~~~l~ 234 (403)
T 3cog_A 208 MYSATKYMNGHSDVVMGLVSVNCESLH 234 (403)
T ss_dssp EEETTTTTTCSSCCCCEEEEECCHHHH
T ss_pred EEcChhhccCCCCCeEEEEEECcHHHH
Confidence 9999999999987 488887655443
No 161
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.77 E-value=2.2e-17 Score=170.08 Aligned_cols=141 Identities=12% Similarity=0.092 Sum_probs=112.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++|++++..++....+ +++.|+++...|.+....+ +..|+ +++.++.+ |
T Consensus 131 ~~v~~~sG~~Ai~~al~~l~~--------------~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~---~v~~v~~~-----d 188 (445)
T 1qgn_A 131 STLLMASGMCASTVMLLALVP--------------AGGHIVTTTDCYRKTRIFIETILPKMGI---TATVIDPA-----D 188 (445)
T ss_dssp EEEEESCHHHHHHHHHHHHSC--------------SSCEEEEETTSCHHHHHHHHHTGGGGTC---EEEEECSS-----C
T ss_pred cEEEeCCHHHHHHHHHHHHhC--------------CCCEEEEcCCCchhHHHHHHHHHHHcCC---EEEEeCCC-----C
Confidence 457778888999888876533 5667888889999877753 34566 78888765 8
Q ss_pred HHHHHHHHHHhhhcCCCc-EEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 80 CSFLEQTIQTSLAEKKIP-LFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~-~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
+++|+++|++ ++ ++|++++++|++|.+.|+++|+++||+||+++++|++|+.+....+ . .. .+|++
T Consensus 189 ~~~l~~ai~~------~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~-~-----~~-g~Div 255 (445)
T 1qgn_A 189 VGALELALNQ------KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKA-L-----AL-GADLV 255 (445)
T ss_dssp HHHHHHHHHH------SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCT-T-----TT-TCSEE
T ss_pred HHHHHHHhcc------CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCc-c-----cc-CCEEE
Confidence 9999999976 36 8999999999999999999999999999999999999987654211 1 11 47999
Q ss_pred EECCccccCCCC--ceEEEEEec
Q psy14299 159 SWNPHKMLGAPL--QCSILLIKE 179 (448)
Q Consensus 159 ~~s~hK~l~~P~--g~G~l~vr~ 179 (448)
+.|+||+++++. ..|+++.++
T Consensus 256 ~~S~sK~~gg~gd~~~G~l~~~~ 278 (445)
T 1qgn_A 256 LHSATKFLGGHNDVLAGCISGPL 278 (445)
T ss_dssp EECTTTTTTCSSSCCCEEEEECH
T ss_pred EECCcccccccccceEEEEEECH
Confidence 999999998553 288887755
No 162
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.77 E-value=6.1e-17 Score=165.38 Aligned_cols=286 Identities=12% Similarity=0.083 Sum_probs=174.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC-------C--CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG-------M--DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~-------~--~~v~~v~~~~ 74 (448)
.++||+|||+||..++.+++... ...|.+ .++.+|+.+...|.+...++...|.. + ..+..+|.+
T Consensus 116 ~v~~~~ggteA~~~al~~~~~~~----~~~~~~-g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~- 189 (420)
T 2pb2_A 116 RVLFMNSGTEANETAFKLARHYA----CVRHSP-FKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFN- 189 (420)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH----HHHTCT-TCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTT-
T ss_pred eEEEeCCHHHHHHHHHHHHHHHh----hhccCC-CCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCC-
Confidence 47999999999999998877521 001111 12345555667777766666665541 0 125556543
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccc----ccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhc
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA----FDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~----~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
|+++|++++++ ++++|+++.+.+++|. ..++++|.++|++||+++++|++|.+.............
T Consensus 190 ----d~~~le~~i~~------~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~ 259 (420)
T 2pb2_A 190 ----DLHAVKAVMDD------HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHY 259 (420)
T ss_dssp ----CHHHHHHHCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHH
T ss_pred ----CHHHHHHHhcc------CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhc
Confidence 89999999853 5788888888776775 478999999999999999999999632111111111112
Q ss_pred CCCCccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHh
Q psy14299 151 GINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKAR 230 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (448)
++ ..|++++ +|++++...+|+++++++ +...... . . .. . ++
T Consensus 260 ~~-~~diit~--sK~l~~G~~iG~~~~~~~-l~~~l~~---~-~--~~----~-------t~------------------ 300 (420)
T 2pb2_A 260 GV-TPDILTS--AKALGGGFPVSAMLTTQE-IASAFHV---G-S--HG----S-------TY------------------ 300 (420)
T ss_dssp TC-CCSEEEE--CGGGGTTSCCEEEEECHH-HHTTCC----------C----C-------EE------------------
T ss_pred CC-CCCeEEe--cccccCCCceEEEEEhHH-HHHhhcC---C-C--cC----c-------cc------------------
Confidence 32 3687754 799986667899888654 3322111 0 0 00 0 00
Q ss_pred ChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHH
Q psy14299 231 GNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKA 310 (448)
Q Consensus 231 g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (448)
+++.+.+..+..+++.
T Consensus 301 ----------------------------------------------------------------~~~~~~~aa~~a~L~~ 316 (420)
T 2pb2_A 301 ----------------------------------------------------------------GGNPLACAVAGAAFDI 316 (420)
T ss_dssp ----------------------------------------------------------------CCCHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------CcCHHHHHHHHHHHHH
Confidence 0001111222233444
Q ss_pred hcCccHHHHHHHHHHHHHHHHHHhhcC----CCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHH
Q psy14299 311 RGNLGFRHFVDNAVDCSRYFLSQISQR----PGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLV 386 (448)
Q Consensus 311 ~~~~G~~~~~~~~~~l~~~~~~~L~~~----pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~ 386 (448)
+.. +++.++..++++++.+.|+++ |.+..+ ++...++.+.+... .. ....++.+.|.
T Consensus 317 ~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~~g~~~~v~~~~~-~~-------------~~~~~l~~~l~ 377 (420)
T 2pb2_A 317 INT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDI--RGMGLLIGAELKPK-YK-------------GRARDFLYAGA 377 (420)
T ss_dssp HSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE--EEETTEEEEEECGG-GT-------------TCHHHHHHHHH
T ss_pred HHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE--EecceEEEEEECCC-ch-------------HHHHHHHHHHH
Confidence 333 355667777888888888764 444332 23344555544211 00 01247888999
Q ss_pred hCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 387 LGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 387 ~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
++| +.+.+. +. +++|+++ +..++++|+++++++|+++.+++
T Consensus 378 ~~G-i~v~~~---~~---~~iRl~~--~~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 378 EAG-VMVLNA---GA---DVMRFAP--SLVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp HTT-EECEES---ST---TEEEECC--CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HCC-CEEEeC---CC---CEEEEEC--CCCCCHHHHHHHHHHHHHHHHHH
Confidence 998 444443 22 6899999 67899999999999999987653
No 163
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.77 E-value=1.7e-17 Score=173.43 Aligned_cols=160 Identities=9% Similarity=0.041 Sum_probs=115.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC--CCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER--GQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~--g~id~e 81 (448)
..++|+|+++++.+++.+.... |- .+++.|+++...|.++...++..|. +++.++++++ +.+|++
T Consensus 155 ~i~~t~G~~~ai~~~~~~l~~~--------gd--~~~d~Vlv~~p~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~ 221 (498)
T 3ihj_A 155 NIYLTTGASDGISTILKILVSG--------GG--KSRTGVMIPIPQYPLYSAVISELDA---IQVNYYLDEENCWALNVN 221 (498)
T ss_dssp GEEEESSHHHHHHHHHHHHCCC--------CG--GGSEEEEEEESCCTHHHHHHHHTTC---EEEEEECBGGGTTBCCHH
T ss_pred cEEEcCCHHHHHHHHHHHHcCC--------CC--CCCCEEEEeCCCchhHHHHHHHcCC---EEEEeeccccccCCCCHH
Confidence 5789999999998888765442 00 0235899999999999999999998 7888888764 589999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEeccccccccccc----chhhhhcCC--
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSE----KYSFVLKGI-- 152 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~----~~~~~~~~~-- 152 (448)
+|++++++... +.++++|++++++|+||.+.+ +++|+++|++||+++++|.+|+...+... ........+
T Consensus 222 ~le~~l~~~~~-~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~ 300 (498)
T 3ihj_A 222 ELRRAVQEAKD-HCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGP 300 (498)
T ss_dssp HHHHHHHHHTT-TSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCH
T ss_pred HHHHHHHhhhc-cCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcc
Confidence 99999987422 125889999999999998855 77799999999999999999987654211 111111100
Q ss_pred ---CCcc-EEEECCccccCC-C-CceEEEEE
Q psy14299 153 ---NRAN-SVSWNPHKMLGA-P-LQCSILLI 177 (448)
Q Consensus 153 ---~~aD-~~~~s~hK~l~~-P-~g~G~l~v 177 (448)
.... ++..|++|.+.+ | ...|++.+
T Consensus 301 ~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~ 331 (498)
T 3ihj_A 301 EYSSNVELASFHSTSKGYMGECGYRGGYMEV 331 (498)
T ss_dssp HHHTTCCEEEEEESSSSTTCCSSSCCEEEEE
T ss_pred cccCceeEEEEeccccccccCcccceEEEEE
Confidence 0122 455689999843 3 34566654
No 164
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.77 E-value=1.2e-16 Score=163.19 Aligned_cols=292 Identities=11% Similarity=0.019 Sum_probs=173.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEec-CCCchHHHHHHHHhCCC----------CCcEEEEec
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTS-EDSHYSMLKAAHWLGIG----------MDNVIRVKT 72 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~-~~~H~s~~~~~~~~g~~----------~~~v~~v~~ 72 (448)
.++||+|||++|..++..++... +..| .|++.|++. ...|.+...++...+.. ...+..++.
T Consensus 105 ~v~~~~ggtea~~~ai~~~~~~~----~~~g---~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (429)
T 1s0a_A 105 CVFLADSGSVAVEVAMKMALQYW----QAKG---EARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPA 177 (429)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH----HHHT---CCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECC
T ss_pred EEEEeCCHHHHHHHHHHHHHHHh----cccC---CCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCC
Confidence 57999999999999988765310 0011 134444444 46676655554433210 012455665
Q ss_pred CC------CCCcCHHHHHHHHHHhhhcCCCcEEEEEecc-CCccccccC----HHHHHHHHHHcCCEEEEeccccccccc
Q psy14299 73 NE------RGQMICSFLEQTIQTSLAEKKIPLFVNATAG-TTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIF 141 (448)
Q Consensus 73 ~~------~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~-~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~ 141 (448)
+. .+.+|+++|++++++. ..++++|+++.. ++++|.+.| +++|.++|++||+++|+|++|+.....
T Consensus 178 ~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~ 254 (429)
T 1s0a_A 178 PQSRMDGEWDERDMVGFARLMAAH---RHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRT 254 (429)
T ss_dssp CCSBC-CCCCGGGGHHHHHHHHHH---TTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTT
T ss_pred CcccccccchHHHHHHHHHHHHhC---CCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCccc
Confidence 42 2468999999999742 124667777766 788998777 999999999999999999999732111
Q ss_pred ccchhhhhcCCCCccEEEECCccccCCC-CceEEEEEeccchhhhhccCC-cccccccCcccccccCCCCCcccCCCCch
Q psy14299 142 SEKYSFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKEKGLLHQANATA-ATYLFQQDKFYDVSFDTGDKSVQCGRKVD 219 (448)
Q Consensus 142 ~~~~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (448)
.........++ ..|+++++ |+++++ .++|++++++ ++........ ..+... ..+ .
T Consensus 255 g~~~~~~~~~~-~~d~~t~s--K~l~~G~~~iG~~~~~~-~~~~~l~~~~~~~~~~~-----------~t~------~-- 311 (429)
T 1s0a_A 255 GKLFACEHAEI-APDILCLG--KALTGGTMTLSATLTTR-EVAETISNGEAGCFMHG-----------PTF------M-- 311 (429)
T ss_dssp SSSSGGGGGTC-CCSEEEEC--GGGGTSSSCCEEEEECH-HHHHHHHTSTTSSCSCC-----------CTT------T--
T ss_pred chHHHhhhcCC-CCCEEEec--ccccCCCccceEEEeCH-HHHHHhhcCCCcccccC-----------CCC------C--
Confidence 00001111122 35777665 988877 7899988865 4433322110 000000 000 0
Q ss_pred hHHHHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccch
Q psy14299 220 AFKLWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKV 299 (448)
Q Consensus 220 ~~~~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (448)
++.+
T Consensus 312 ----------------------------------------------------------------------------~n~~ 315 (429)
T 1s0a_A 312 ----------------------------------------------------------------------------GNPL 315 (429)
T ss_dssp ----------------------------------------------------------------------------TCHH
T ss_pred ----------------------------------------------------------------------------CCHH
Confidence 0111
Q ss_pred hhHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcC---CCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhh
Q psy14299 300 DAFKLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQR---PGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSK 376 (448)
Q Consensus 300 ~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~---pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 376 (448)
.+.+...+++.+..+ .+.++..++++++.+.|+++ |++..+ ++...++.+.+ +...+
T Consensus 316 ~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~--~~~g~~~~~~~-~~~~~-------------- 375 (429)
T 1s0a_A 316 ACAAANASLAILESG---DWQQQVADIEVQLREQLAPARDAEMVADV--RVLGAIGVVET-THPVN-------------- 375 (429)
T ss_dssp HHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHGGGGGCTTEEEE--EEETTEEEEEE-SSCBC--------------
T ss_pred HHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEEE--EEeeEEEEEEE-CCccc--------------
Confidence 122222334433332 34566777788888888775 666543 22333444433 21111
Q ss_pred hhHHHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 377 VAPRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 377 ~~~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
..++.+.|.++| +.+.+. + +++|+++ +..+|++|+++++++|+++.++
T Consensus 376 -~~~l~~~l~~~G-i~v~~~---~----~~iRis~--~~~~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 376 -MAALQKFFVEQG-VWIRPF---G----KLIYLMP--PYIILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp -HHHHHHHHHHTT-EECCCB---T----TEEEECC--CTTCCHHHHHHHHHHHHHHTSS
T ss_pred -HHHHHHHHHHCC-CEEecc---C----CEEEEEC--CCCCCHHHHHHHHHHHHHHHHh
Confidence 236788888888 554432 2 6899999 7889999999999999988654
No 165
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.77 E-value=1.7e-16 Score=161.55 Aligned_cols=161 Identities=11% Similarity=0.056 Sum_probs=106.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC----------CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG----------MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~----------~~~v~~v~~~ 73 (448)
.++||+|||+++..++..++... .++.+|+.+...|.+...++...|.. ...+..+|.+
T Consensus 104 ~v~~~~g~~~a~~~~~~~a~~~~-----------~~~~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~ 172 (426)
T 1sff_A 104 KTLLVTTGSEAVENAVKIARAAT-----------KRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYP 172 (426)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH-----------TCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCC
T ss_pred EEEEeCchHHHHHHHHHHHHHhh-----------CCCeEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCC
Confidence 57999999999999987544321 14555666677777777777776642 0126667765
Q ss_pred C-----CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccc
Q psy14299 74 E-----RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEK 144 (448)
Q Consensus 74 ~-----~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~ 144 (448)
. ++.+|+++|++++++.. .+.++++|+++...+++|...+ +++|.++|++||+++++|++|+. ......
T Consensus 173 ~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~-~~~~g~ 250 (426)
T 1sff_A 173 CPLHGISEDDAIASIHRIFKNDA-APEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSG-AGRTGT 250 (426)
T ss_dssp BGGGTBCHHHHHHHHHHHHHHTC-CGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTT-TTTTSS
T ss_pred ccccccchHHHHHHHHHHHHhcc-CCCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhc-cCcccc
Confidence 3 23579999999997410 0124677777655455997877 99999999999999999999994 221111
Q ss_pred -hhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 145 -YSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 145 -~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
......++ ..|++ +++|++++...+|+++++++
T Consensus 251 ~~~~~~~~~-~~di~--s~sK~~~~GlriG~~~~~~~ 284 (426)
T 1sff_A 251 LFAMEQMGV-APDLT--TFAKSIAGGFPLAGVTGRAE 284 (426)
T ss_dssp SSGGGGTTS-CCSEE--EECGGGGTSSCCEEEEEEHH
T ss_pred hhhhhhcCC-CCCEE--EEcccccCCCceEEEEEcHH
Confidence 11111122 36766 45699885223698888663
No 166
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.76 E-value=6.2e-17 Score=160.49 Aligned_cols=269 Identities=11% Similarity=0.022 Sum_probs=175.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec-CCCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT-NERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~-~~~g~id~e~ 82 (448)
..++|+|||+++.+++.+.. ++.|+++...|.++...++..|. +++.++. ++++.+++
T Consensus 69 ~i~~t~g~~~al~~~~~~l~----------------gd~Vi~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~-- 127 (350)
T 3fkd_A 69 AILVTNGPTAAFYQIAQAFR----------------GSRSLIAIPSFAEYEDACRMYEH---EVCFYPSNEDIGEADF-- 127 (350)
T ss_dssp GEEEESHHHHHHHHHHHHTT----------------TCEEEEEESCCHHHHHHHHHTTC---EEEEEETTSCGGGSCC--
T ss_pred HEEEcCCHHHHHHHHHHHHC----------------CCEEEEeCCCcHHHHHHHHHcCC---eEEEEecCCccccCcc--
Confidence 57899999999888876543 24588889999999999999998 8999998 65455655
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcC-CEEEEecccccccccccchhhhhcCCCCccEEEEC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYD-LWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWN 161 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g-~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s 161 (448)
.++++|++++++|++|.+.|++++.++++.++ .++++|++|+............+. ....++++.|
T Consensus 128 ------------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~-~~~~~i~~~S 194 (350)
T 3fkd_A 128 ------------SNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIK-GRKNLVMVYS 194 (350)
T ss_dssp ------------TTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGT-TCSSEEEEEE
T ss_pred ------------CCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhh-cCCCEEEEec
Confidence 14778999999999999999999999999886 799999999764432111111111 1134588889
Q ss_pred CccccCCC-CceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHHHHHHH
Q psy14299 162 PHKMLGAP-LQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFVD 240 (448)
Q Consensus 162 ~hK~l~~P-~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~i~ 240 (448)
++|+++.| ..+|+++. ++++..........+ ....+..+
T Consensus 195 ~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~-----------------------~~~~~~~~---------------- 234 (350)
T 3fkd_A 195 FSHAYGIPGLRIGYIVA-NKDFMKRVAAFSTPW-----------------------AVNALAIE---------------- 234 (350)
T ss_dssp SHHHHSCGGGCCEEEEC-CHHHHHHHHTTCCTT-----------------------CSCHHHHH----------------
T ss_pred CchhccCcchheEeEEe-CHHHHHHHHHhCCCC-----------------------CCCHHHHH----------------
Confidence 99999844 46787777 444443332111100 00001001
Q ss_pred HhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCccHHHHH
Q psy14299 241 NAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGFRHFV 320 (448)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 320 (448)
.+..+++... ...+++.
T Consensus 235 --------------------------------------------------------------~~~~~l~~~~-~~~~~~~ 251 (350)
T 3fkd_A 235 --------------------------------------------------------------AAKFILIHPA-QFTLPIR 251 (350)
T ss_dssp --------------------------------------------------------------HHHHHHHCTT-TTCCCHH
T ss_pred --------------------------------------------------------------HHHHHHhCHH-HHHHHHH
Confidence 0111111110 0112222
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHh-CCcEEEEeeecC
Q psy14299 321 DNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVL-GGTLMIGYQPLQ 399 (448)
Q Consensus 321 ~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~-~g~~~~~~~~~~ 399 (448)
+.. ++++++.+.|+++|++++. ++..+.+.+.+.. . + ..++.+.|.+ +| +.+.++...
T Consensus 252 ~~~-~~~~~l~~~L~~~~~~~~~--~~~~~~~~~~~~~-~-~---------------~~~l~~~L~~~~g-i~v~~g~~f 310 (350)
T 3fkd_A 252 KWQ-RNTVDFITALNRLDGVEVH--PSGTTFFLLRLKK-G-T---------------AAELKKYMLEEYN-MLIRDASNF 310 (350)
T ss_dssp HHH-HHHHHHHHHHHHSTTEEEC--CCSSSEEEEEESS-S-C---------------HHHHHHHHHHTTC-EECEECTTS
T ss_pred HHH-HHHHHHHHHHhcCCCcEEC--CCCCcEEEEECCC-C-C---------------HHHHHHHHHHHCC-EEEEeCccC
Confidence 233 7788999999999999985 4444444444321 1 1 2378889998 78 555554333
Q ss_pred CcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q psy14299 400 HRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAE 435 (448)
Q Consensus 400 g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~ 435 (448)
+...++++|+++. +++|+++++++|+++.++
T Consensus 311 ~~~~~~~iRis~~-----~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 311 RGLDESYVRITTQ-----RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp TTCCTTEEEEECC-----CHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCEEEEEcC-----CHHHHHHHHHHHHHHHHH
Confidence 2222479999983 789999999999988764
No 167
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.76 E-value=4.7e-17 Score=164.63 Aligned_cols=141 Identities=12% Similarity=0.048 Sum_probs=115.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHH----HHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKA----AHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~----~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++||+++..++.++.. +++.|+++...|.+.... ++..|+ +++.++.+ |
T Consensus 76 ~~i~~~sG~~ai~~~~~~~~~--------------~gd~vl~~~~~y~~~~~~~~~~~~~~g~---~~~~v~~~-----d 133 (389)
T 3acz_A 76 GSAAFGSGMGAISSSTLAFLQ--------------KGDHLIAGDTLYGCTVSLFTHWLPRFGI---EVDLIDTS-----D 133 (389)
T ss_dssp EEEEESSHHHHHHHHHTTTCC--------------TTCEEEEESSCCHHHHHHHHHHHHHTTC---EEEEECTT-----C
T ss_pred eEEEeCCHHHHHHHHHHHHhC--------------CCCEEEEeCCCchHHHHHHHHHHHHcCC---EEEEECCC-----C
Confidence 468889999998888765422 566788899999987766 466777 78888863 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
++++++++++ ++++|++++++|++|.+.|+++|.++|++||+++++|++|+.+....+ . . . .+|+++
T Consensus 134 ~~~l~~~i~~------~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~-~----~-~-~~di~~ 200 (389)
T 3acz_A 134 VEKVKAAWKP------NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKP-L----E-L-GADIAL 200 (389)
T ss_dssp HHHHHHTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCG-G----G-T-TCSEEE
T ss_pred HHHHHHhcCC------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCc-c----c-c-CCeEEE
Confidence 9999998854 478999999999999999999999999999999999999987754211 1 1 1 479999
Q ss_pred ECCccccCCCCc--eEEEEEec
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKE 179 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~ 179 (448)
.|+||++++|.+ .|+++.++
T Consensus 201 ~S~sK~~~~~~~~~~G~v~~~~ 222 (389)
T 3acz_A 201 HSVSKYINGHGDVIGGVSSAKT 222 (389)
T ss_dssp EETTTTTTCSSCCCCEEEEESS
T ss_pred ECChhhccCCCCceeEEEEECc
Confidence 999999999988 68888765
No 168
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.76 E-value=8e-17 Score=165.28 Aligned_cols=138 Identities=12% Similarity=0.038 Sum_probs=112.2
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHH----HHHHhCCCCCcEEEEecCCCCCcCH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLK----AAHWLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~----~~~~~g~~~~~v~~v~~~~~g~id~ 80 (448)
++++++|++|+..++.+..+ +++.|+++...|.+... .+...|+ +++.++.+ |+
T Consensus 100 ~v~~~sG~~Ai~~al~al~~--------------~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~---~~~~v~~~-----d~ 157 (430)
T 3ri6_A 100 VLALGSGMAAISTAILTLAR--------------AGDSVVTTDRLFGHTLSLFQKTLPSFGI---EVRFVDVM-----DS 157 (430)
T ss_dssp EEEESCHHHHHHHHHHHHCC--------------TTCEEEEETTCCHHHHHHHHTHHHHTTC---EEEEECTT-----CH
T ss_pred EEEECCHHHHHHHHHHHHhC--------------CCCEEEEcCCCchhHHHHHHHHHHHcCC---EEEEeCCC-----CH
Confidence 68889999999888876633 67789999999998877 5567777 78888876 89
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEE
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSW 160 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~ 160 (448)
++|++++++ ++++|+++.++|++|.+.|+++|+++|+++|+++++|++++.+....+. -. ++|+++.
T Consensus 158 ~~l~~ai~~------~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~~~~----~~---g~div~~ 224 (430)
T 3ri6_A 158 LAVEHACDE------TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLLEAK----RL---GVDIEVL 224 (430)
T ss_dssp HHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTCCGG----GG---TCSEEEE
T ss_pred HHHHHhhCC------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCChH----Hc---CCEEEEE
Confidence 999999864 5889999999999999999999999999999999999999977652211 11 4799999
Q ss_pred CCccccCCCC--ceEEEEE
Q psy14299 161 NPHKMLGAPL--QCSILLI 177 (448)
Q Consensus 161 s~hK~l~~P~--g~G~l~v 177 (448)
|++|++++|. -.|+++.
T Consensus 225 S~sK~l~g~g~~~gG~vv~ 243 (430)
T 3ri6_A 225 SSTKFISGGGTSVGGVLID 243 (430)
T ss_dssp ECCCEEETTEEECCEEEEE
T ss_pred CCcccccCCCCceEEEEEE
Confidence 9999999873 3444443
No 169
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.76 E-value=1.2e-17 Score=170.59 Aligned_cols=142 Identities=12% Similarity=0.094 Sum_probs=112.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH----HhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH----WLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~----~~g~~~~~v~~v~~~~~g~id 79 (448)
..++++|||+||..++.+..+ +++.|+++...|.+....+. ..|+ ++..++.+ |
T Consensus 99 ~~i~~ssGt~Ai~~al~~l~~--------------~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~---~v~~v~~~-----d 156 (415)
T 2fq6_A 99 GCVLFPCGAAAVANSILAFIE--------------QGDHVLMTNTAYEPSQDFCSKILSKLGV---TTSWFDPL-----I 156 (415)
T ss_dssp EEEEESSHHHHHHHHHHTTCC--------------TTCEEEEETTSCHHHHHHHHHTGGGGTC---EEEEECTT-----C
T ss_pred eEEEeCCHHHHHHHHHHHHhC--------------CCCEEEEeCCCchHHHHHHHHHHHHcCc---EEEEECCC-----C
Confidence 367889999999888765422 56788899999998887663 3455 67777764 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHH--cCCEEEEecccccccccccchhhhhcCCCCccE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEK--YDLWMHVDACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~--~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
+++|+++|++ ++++|++.+++|++|.+.|+++|+++|++ ||+++|+|++|+.+....+. .. ++|+
T Consensus 157 ~~~le~ai~~------~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~------~~-g~Di 223 (415)
T 2fq6_A 157 GADIVKHLQP------NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKAL------DF-GIDV 223 (415)
T ss_dssp GGGGGGGCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGG------GG-TCSE
T ss_pred HHHHHHhhcc------CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCcc------cc-CCeE
Confidence 8999998854 48899999999999999999999999999 99999999999866432111 11 4799
Q ss_pred EEECCccccCCCCc--eEEEEEecc
Q psy14299 158 VSWNPHKMLGAPLQ--CSILLIKEK 180 (448)
Q Consensus 158 ~~~s~hK~l~~P~g--~G~l~vr~~ 180 (448)
++.|+||++++|.+ .|+++.+++
T Consensus 224 v~~S~sK~lg~~g~~~~G~l~~~~~ 248 (415)
T 2fq6_A 224 SIQAATKYLVGHSDAMIGTAVCNAR 248 (415)
T ss_dssp EEEETTTTTTCSSSCCCEEEEECTT
T ss_pred EEEeCccccCCCCCceEEEEEeCHH
Confidence 99999999998765 677777553
No 170
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.76 E-value=8.9e-17 Score=163.40 Aligned_cols=154 Identities=8% Similarity=-0.021 Sum_probs=111.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC-CCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN-ERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~-~~g~id~e~ 82 (448)
.+++|+|||+++..++.+... +++.|+++...|.++...++..|. +++.+|.+ +++.+|+++
T Consensus 104 ~i~~t~g~~~al~~~~~~l~~--------------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~d~~~ 166 (418)
T 3rq1_A 104 RSIATAGGTGGIHHLIHNYTE--------------PGDEVLTADWYWGAYRVICSDTGR---TLVTYSLFDEHNNFNHEA 166 (418)
T ss_dssp EEEEESHHHHHHHHHHHHHSC--------------TTCEEEEESSCCTHHHHHHHHTTC---EEEEECSBCTTSSBCHHH
T ss_pred cEEECCchHHHHHHHHHHhcC--------------CCCEEEECCCCchhHHHHHHHcCC---EEEEEeeeCCCCCcCHHH
Confidence 689999999999988876543 667899999999999999999998 78899984 467999999
Q ss_pred HHHHHHHhhhcCCCcE-EEEEecc-CCccccccCHHHHH---HHHH------HcCCEEEEecccccccccccchh---hh
Q psy14299 83 LEQTIQTSLAEKKIPL-FVNATAG-TTVLGAFDPLDEIA---TVCE------KYDLWMHVDACWGGSLIFSEKYS---FV 148 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~-lVv~~~~-~t~tG~~~~l~~I~---~ia~------~~g~~l~VD~A~~~~~~~~~~~~---~~ 148 (448)
|++++++.... +++ +++++.+ +|+||.+.|.+++. ++|+ +||+++++|++|........... ..
T Consensus 167 l~~~l~~~~~~--~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~ 244 (418)
T 3rq1_A 167 FQNRVNELAAK--QTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNK 244 (418)
T ss_dssp HHHHHHHHHHH--CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGG
T ss_pred HHHHHHHhhcc--CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHH
Confidence 99999753211 244 7888888 89999998866555 5555 89999999999865443111101 11
Q ss_pred hcCCCCcc---EEEECCccccCCC-CceEEEEE
Q psy14299 149 LKGINRAN---SVSWNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 149 ~~~~~~aD---~~~~s~hK~l~~P-~g~G~l~v 177 (448)
..++. -| +++.|++|.++.| ..+|+++.
T Consensus 245 ~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~~ 276 (418)
T 3rq1_A 245 FSHLP-KEILTCVCYSLSKGFTMYGQRVGAMIG 276 (418)
T ss_dssp GTTCC-TTEEEEEEEESTTTTTCCSSCCEEEEE
T ss_pred HHhcC-CCceEEEEEeCCCCCcCcCCcceEEEE
Confidence 11111 23 6667999998755 34677665
No 171
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.76 E-value=2.1e-16 Score=159.62 Aligned_cols=288 Identities=13% Similarity=0.086 Sum_probs=170.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.++||+|||++|..++.+++... ...|.+ .++.+|+.+...|.+...+....+... ..+..+|.+
T Consensus 98 ~v~~~~gg~~a~~~al~~~~~~~----~~~~~~-g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 171 (406)
T 4adb_A 98 RVFFCNSGAEANEAALKLARKFA----HDRYGS-HKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYN- 171 (406)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH----HHHTCT-TCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTT-
T ss_pred eEEEeCcHHHHHHHHHHHHHHHH----HhcCCC-CCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCC-
Confidence 57999999999999988776520 000111 134566666777777666666554211 135555543
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc-----cCHHHHHHHHHHcCCEEEEecccccccccccchhhhh
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF-----DPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVL 149 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~-----~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~ 149 (448)
|+++|++++++ ++++|+++ +.+++|.+ .++++|.++|++||+++|+|++|+.............
T Consensus 172 ----d~~~l~~~l~~------~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~ 240 (406)
T 4adb_A 172 ----DINSASALIDD------STCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMH 240 (406)
T ss_dssp ----CHHHHHTTCST------TEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHH
T ss_pred ----cHHHHHHHhcC------CeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHh
Confidence 89999998853 57888888 77777743 5799999999999999999999973211111111111
Q ss_pred cCCCCccEEEECCccccCCCCceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHH
Q psy14299 150 KGINRANSVSWNPHKMLGAPLQCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKA 229 (448)
Q Consensus 150 ~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (448)
.++ ..|++++ +|++++...+|+++.++ ++........... .+ ....
T Consensus 241 ~~~-~~d~~t~--sK~~~~G~r~G~~~~~~-~~~~~~~~~~~~~---------------~~------~~~~--------- 286 (406)
T 4adb_A 241 YGV-TPDLLTT--AKALGGGFPVGALLATE-ECARVMTVGTHGT---------------TY------GGNP--------- 286 (406)
T ss_dssp HTC-CCSEEEE--CGGGGTTSCCEEEEECH-HHHHTCCTTSSCC---------------SS------TTCH---------
T ss_pred cCC-CCCEEEe--chhhcCCCCeEEEEEcH-HHHhhhccCCcCC---------------CC------CCCH---------
Confidence 222 2577765 99998444588877754 3333221100000 00 0001
Q ss_pred hChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHH
Q psy14299 230 RGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWK 309 (448)
Q Consensus 230 ~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (448)
+.+..+..+++
T Consensus 287 ---------------------------------------------------------------------~~~~a~~~~l~ 297 (406)
T 4adb_A 287 ---------------------------------------------------------------------LASAVAGKVLE 297 (406)
T ss_dssp ---------------------------------------------------------------------HHHHHHHHHHH
T ss_pred ---------------------------------------------------------------------HHHHHHHHHHH
Confidence 11111222333
Q ss_pred HhcCccHHHHHHHHHHHHHHHHHHhhcCCC-eEEecc-CCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHh
Q psy14299 310 ARGNLGFRHFVDNAVDCSRYFLSQISQRPG-FRLVIP-EFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVL 387 (448)
Q Consensus 310 ~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg-~~l~~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~ 387 (448)
.... +++.++..++++++.+.|+++.. +.++.. +.....+.+.+.. ... ....++.+.|.+
T Consensus 298 ~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~-------------~~~~~~~~~l~~ 360 (406)
T 4adb_A 298 LINT---PEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNA-DYA-------------GQAKQISQEAAK 360 (406)
T ss_dssp HHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECT-TTT-------------TCHHHHHHHHHH
T ss_pred HHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeC-CcH-------------HHHHHHHHHHHH
Confidence 3322 45667777888888888876511 111101 1123344444321 110 012478899999
Q ss_pred CCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 388 GGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 388 ~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
+| +.+.+. +. +++|+++ +..++++|+++++++|+++.+++.
T Consensus 361 ~g-i~v~~~---~~---~~iRi~~--~~~~~~e~i~~~~~~l~~~l~~~~ 401 (406)
T 4adb_A 361 AG-VMVLIA---GG---NVVRFAP--ALNVSEEEVTTGLDRFAAACEHFV 401 (406)
T ss_dssp TT-EECEES---ST---TEEEECC--CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CC-cEEeec---CC---CeEEEEC--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 98 444442 22 7999998 688999999999999999987764
No 172
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.75 E-value=3.5e-17 Score=167.71 Aligned_cols=166 Identities=10% Similarity=0.066 Sum_probs=105.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCC-C-CCCC--eEEEec-CCCchHHHHHH----HHhCCCCCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGL-S-HLPP--LCMFTS-EDSHYSMLKAA----HWLGIGMDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~-~-~~~~--~~Vl~~-~~~H~s~~~~~----~~~g~~~~~v~~v~~~~ 74 (448)
..+||+|||+++.+++.++..+- ...|. . ..++ ..|+++ ..+|..+...+ .+.+.+. .+..++.++
T Consensus 108 ~i~~t~G~t~al~~~~~~l~~~g----d~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 182 (444)
T 3if2_A 108 NIALTNGSQNAFFYLFNLFGGAF----VNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLP-HIDEVTHDG 182 (444)
T ss_dssp GEEEESSHHHHHHHHHHHSSEEE----ECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCC-EEEEEEETT
T ss_pred HEEEecCcHHHHHHHHHHHhCCC----ccccccccccccccceEEEeCCCCccchhhcccccchhhccCc-eEEeccccc
Confidence 57999999999999887764320 00000 0 0000 045554 56666655432 1122222 577788765
Q ss_pred -C----CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchh
Q psy14299 75 -R----GQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYS 146 (448)
Q Consensus 75 -~----g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~ 146 (448)
+ +.+|+++|++++++. ..++++|++++++|++|.+.| +++|.++|++||+++|+|++|+..........
T Consensus 183 ~~g~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~ 259 (444)
T 3if2_A 183 EEGFFKYRVDFEALENLPALK---EGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSD 259 (444)
T ss_dssp EEEEEEEECCHHHHHTCHHHH---TTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSC
T ss_pred ccCccccCCCHHHHHHHHHhc---CCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccccccc
Confidence 3 379999999986431 135889999999999999999 88999999999999999999985321111000
Q ss_pred hhhcCCCCccEEEECCccccCCCCceEEEEEe
Q psy14299 147 FVLKGINRANSVSWNPHKMLGAPLQCSILLIK 178 (448)
Q Consensus 147 ~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr 178 (448)
........++++.++||++....++|+++.+
T Consensus 260 -~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~ 290 (444)
T 3if2_A 260 -AHLNWDNNTILCFSLSKIGLPGMRTGIIVAD 290 (444)
T ss_dssp -CCCCCCTTEEEEEESTTTTCGGGCCEEEECC
T ss_pred -ccccCCCCEEEEechhhccCCCCceEEEEEC
Confidence 0001124578899999974433557766553
No 173
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.75 E-value=2.1e-17 Score=167.51 Aligned_cols=144 Identities=15% Similarity=0.084 Sum_probs=109.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++||+||..++. ..+ +++.|+++...|.+..... +..|. +++.++.+ |
T Consensus 72 ~~i~~~sGt~a~~~al~-~~~--------------~gd~Vi~~~~~y~~~~~~~~~~~~~~G~---~v~~v~~~-----d 128 (393)
T 1n8p_A 72 YGLAFSSGSATTATILQ-SLP--------------QGSHAVSIGDVYGGTHRYFTKVANAHGV---ETSFTNDL-----L 128 (393)
T ss_dssp EEEEESCHHHHHHHHHH-TSC--------------SSCEEEEESSCCHHHHHHHHHTSTTTCS---CCEEESSH-----H
T ss_pred cEEEECChHHHHHHHHH-HcC--------------CCCEEEEeCCCchHHHHHHHHHHHHcCc---EEEEeCCC-----h
Confidence 46778888999988876 322 5667888888998766544 33455 67888865 7
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc----CCEEEEecccccccccccchhhhhcCCCCc
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY----DLWMHVDACWGGSLIFSEKYSFVLKGINRA 155 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~----g~~l~VD~A~~~~~~~~~~~~~~~~~~~~a 155 (448)
++|++++++ ++++|++.+++|++|.+.|+++|.++|++| |+++|+|++|+.+... +.. .. .+
T Consensus 129 -~~l~~~i~~------~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~-----~~-~~ 194 (393)
T 1n8p_A 129 -NDLPQLIKE------NTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPL-----NF-GA 194 (393)
T ss_dssp -HHHHHHSCS------SEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGG-----GG-TC
T ss_pred -HHHHHhccc------CceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHH-----Hc-CC
Confidence 888888753 588999999999999999999999999999 9999999999987652 211 11 37
Q ss_pred cEEEECCccccCCCC-ce-EEEEEeccchhh
Q psy14299 156 NSVSWNPHKMLGAPL-QC-SILLIKEKGLLH 184 (448)
Q Consensus 156 D~~~~s~hK~l~~P~-g~-G~l~vr~~~~~~ 184 (448)
|+++.|+||++++|. .. |+++.+++++..
T Consensus 195 di~~~S~sK~~g~~G~rigG~~~~~~~~~~~ 225 (393)
T 1n8p_A 195 DIVVHSATKYINGHSDVVLGVLATNNKPLYE 225 (393)
T ss_dssp SEEEEETTTTTTCSSCCCCEEEEESCHHHHH
T ss_pred eEEEEECcccccCCCCceeEEEEeCCHHHHH
Confidence 999999999987543 15 777775444433
No 174
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.75 E-value=3.2e-17 Score=169.07 Aligned_cols=164 Identities=16% Similarity=0.152 Sum_probs=102.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCC-eEEEecCCCchHHH-HHHHHhCCCCCcEEEE------ecC--
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPP-LCMFTSEDSHYSML-KAAHWLGIGMDNVIRV------KTN-- 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~-~~Vl~~~~~H~s~~-~~~~~~g~~~~~v~~v------~~~-- 73 (448)
.++||+|||+||..++.+++.+.. ...|. ++ +.|+++ ..|+... ......|. .+... +.+
T Consensus 91 ~v~~t~~gt~A~~~al~~~~~~~~---~~~G~---~~~d~Ii~~-~~h~~t~~~~~~~~~~---~~~~~~~~~~~~~~~~ 160 (467)
T 2oqx_A 91 YTIPTHQGRGAEQIYIPVLIKKRE---QEKGL---DRSKMVAFS-NYFFDTTQGHSQINGC---TVRNVYIKEAFDTGVR 160 (467)
T ss_dssp EEEEEC--CCSHHHHHHHHHHHHH---HHHCC---CTTTCEEEE-SSCCHHHHHHHHHTTC---EEEECBCTTTTCTTSC
T ss_pred cEEEcCCcHHHHHHHHHHHhcccc---ccCCC---CccceEEec-ccccccchhhhhccCc---ceeeccccccccCCCC
Confidence 478999999999999988875300 00011 11 346666 6785533 33333444 23222 222
Q ss_pred --CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcc-ccc---cCHHHHHHHHHHcCCEEEEeccccc-ccc------
Q psy14299 74 --ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVL-GAF---DPLDEIATVCEKYDLWMHVDACWGG-SLI------ 140 (448)
Q Consensus 74 --~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~t-G~~---~~l~~I~~ia~~~g~~l~VD~A~~~-~~~------ 140 (448)
.++.+|+++|++++++.. ..++++|+++.+++++ |.+ +++++|.++|++||+++|+|++|+. +..
T Consensus 161 ~~~~~~~d~~~Le~~i~~~~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~ 238 (467)
T 2oqx_A 161 YDFKGNFDLEGLERGIEEVG--PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQRE 238 (467)
T ss_dssp CTTTTCBCHHHHHHHHHHHC--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHC
T ss_pred CCccCCcCHHHHHHHHHhcC--CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhccccc
Confidence 356899999999997521 1247899999999987 654 5689999999999999999988876 332
Q ss_pred --cccchhhhhc--CCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 141 --FSEKYSFVLK--GINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 141 --~~~~~~~~~~--~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
........+. ....+|++++++||+++.|.| |+++.+++
T Consensus 239 ~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~~~ 281 (467)
T 2oqx_A 239 AEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCMKDD 281 (467)
T ss_dssp GGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC-EEEEECSG
T ss_pred ccccCccHHHHhhhhhccCCeEEEecccccCCCCc-eEEEecCh
Confidence 0010000010 012368889999999988855 55555444
No 175
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.74 E-value=2.3e-16 Score=160.95 Aligned_cols=161 Identities=11% Similarity=0.017 Sum_probs=109.7
Q ss_pred cEEEeCcHHHHHH--HHHHHHHHhcCCcccccCCCC--C-CCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCc
Q psy14299 4 KPFLLPGGSISNM--YSICLARYRLDPDTKRKGLSH--L-PPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQM 78 (448)
Q Consensus 4 ~g~~t~ggT~an~--~al~~a~~~~~~~~~~~G~~~--~-~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~i 78 (448)
..++|+|++++++ +.+.+...... .|-.. . +++.|+++..+|..+...++..|. +++.+|.++++ +
T Consensus 95 ~i~~t~G~~~al~l~~~~~~l~~~~~-----~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~g-~ 165 (422)
T 3d6k_A 95 LVVAQDGSSLNIMFDLISWSYTWGNN-----DSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGF---EMINVPMTDEG-P 165 (422)
T ss_dssp GEEECSSCHHHHHHHHHHHHHHHCCT-----TCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTC---EEEEEEEETTE-E
T ss_pred HEEEecchHHHHHHHHHHHHhcCccc-----ccccccccCCCCEEEEeCCccHHHHHHHHHcCC---EEEecCCCCCC-C
Confidence 4789999999873 33333333100 00000 0 133688888999999999999998 78899987766 9
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEE-EeccCCccccccCHH---HHHHHHH-HcCCEEEEeccccccccccc--chhhh--h
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVN-ATAGTTVLGAFDPLD---EIATVCE-KYDLWMHVDACWGGSLIFSE--KYSFV--L 149 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv-~~~~~t~tG~~~~l~---~I~~ia~-~~g~~l~VD~A~~~~~~~~~--~~~~~--~ 149 (448)
|+++|++++++ .++++|+ +.+++|+||.+.|.+ +|.++|+ +||+++++|++|+...+..+ ..... +
T Consensus 166 d~~~l~~~l~~-----~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 240 (422)
T 3d6k_A 166 DMGVVRELVKD-----PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEF 240 (422)
T ss_dssp CHHHHHHHHTS-----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHH
T ss_pred CHHHHHHHHhc-----CCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhH
Confidence 99999999853 2477777 678999999998876 7888888 99999999999974222111 00000 0
Q ss_pred ---cCCCCccEEEECCccccCCC-CceEEEEEec
Q psy14299 150 ---KGINRANSVSWNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 150 ---~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~ 179 (448)
.+....++++.+++|+ +.| ..+|++++++
T Consensus 241 ~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~~ 273 (422)
T 3d6k_A 241 AQAAGNPNRFWFMSSTSKI-THAGSGVSFFASSK 273 (422)
T ss_dssp HHHTTCTTCEEEEEESTTT-SCTTSSCEEEECCH
T ss_pred hhccCCCCcEEEEcChhhh-cCcccceEEEEeCH
Confidence 0112346888899998 555 3588887753
No 176
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.74 E-value=4.6e-16 Score=156.91 Aligned_cols=157 Identities=17% Similarity=0.117 Sum_probs=103.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC---------CCCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI---------GMDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~---------~~~~v~~v~~~~ 74 (448)
.++||+|||++|..++.+++... ...|- ..+.+|+.+...|.+...+....+. -...+..++.+
T Consensus 95 ~v~~~~gg~ea~~~al~~~~~~~----~~~g~--~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 167 (395)
T 3nx3_A 95 RVFFTNSGTESIEGAMKTARKYA----FNKGV--KGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYN- 167 (395)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH----HHTTC--TTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT-
T ss_pred eEEEeCCHHHHHHHHHHHHHHHh----hccCC--CCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCC-
Confidence 57999999999999998776531 01110 1344555556666554444433221 01145566654
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccchhhhhc
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
|+++|++++++ ++++|++..+.+++|.+.| +++|.++|++||+++|+|++|.........+.....
T Consensus 168 ----d~~~l~~~l~~------~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~ 237 (395)
T 3nx3_A 168 ----DISSVEKLVNE------KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHA 237 (395)
T ss_dssp ----CHHHHHTTCCT------TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGG
T ss_pred ----CHHHHHHhccC------CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhc
Confidence 89999998853 4788999888888999888 999999999999999999998742111111111111
Q ss_pred CCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 151 GINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
++ ..|+++++ |.++++.++|+++.+++
T Consensus 238 ~~-~~d~~t~s--K~~~~G~~~G~~~~~~~ 264 (395)
T 3nx3_A 238 QI-LPDIMTSA--KALGCGLSVGAFVINQK 264 (395)
T ss_dssp TC-CCSEEEEC--GGGTTTSCCEEEEECHH
T ss_pred CC-CCCEEEec--ccccCCCceEEEEEchh
Confidence 22 25777765 88877778898887654
No 177
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.74 E-value=7.6e-17 Score=164.71 Aligned_cols=142 Identities=10% Similarity=0.048 Sum_probs=114.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHH----hCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHW----LGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~----~g~~~~~v~~v~~~~~g~id 79 (448)
.+++++||++++..++.++.+ +++.|+++...|.+....++. .|. +++.++.+ |
T Consensus 98 ~~~~~~sG~~Ai~~al~~l~~--------------~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~---~~~~v~~~-----d 155 (414)
T 3ndn_A 98 AAFATASGMAAVFTSLGALLG--------------AGDRLVAARSLFGSCFVVCSEILPRWGV---QTVFVDGD-----D 155 (414)
T ss_dssp EEEEESSHHHHHHHHHHTTCC--------------TTCEEEEESCCCHHHHHHHHTHHHHTTC---EEEEECTT-----C
T ss_pred cEEEECCHHHHHHHHHHHHhC--------------CCCEEEEcCCccchHHHHHHHHHHHcCc---EEEEeCCC-----C
Confidence 478999999998887765432 667889999999987776643 677 78888876 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+++|++++++ ++++|++..++|++|.+.|+++|.++|++||+++++|++|+.+....+. . .++|+++
T Consensus 156 ~~~l~~ai~~------~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~-~------~g~div~ 222 (414)
T 3ndn_A 156 LSQWERALSV------PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGF-P------LGVDVVV 222 (414)
T ss_dssp HHHHHHHTSS------CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCG-G------GTCSEEE
T ss_pred HHHHHHhcCC------CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCch-h------cCCCeEe
Confidence 9999999854 4789999999999999999999999999999999999999866543221 0 1379999
Q ss_pred ECCccccCCCCc--eEEEEEecc
Q psy14299 160 WNPHKMLGAPLQ--CSILLIKEK 180 (448)
Q Consensus 160 ~s~hK~l~~P~g--~G~l~vr~~ 180 (448)
.|++|+++++.. .|+++.+++
T Consensus 223 ~S~sK~l~~~G~~~~G~vv~~~~ 245 (414)
T 3ndn_A 223 YSGTKHIDGQGRVLGGAILGDRE 245 (414)
T ss_dssp EETTTTTTCSSCCCCEEEEECHH
T ss_pred ccCCccccCCCCceEEEEEECHH
Confidence 999999987653 677776554
No 178
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.74 E-value=6.3e-16 Score=158.56 Aligned_cols=159 Identities=14% Similarity=0.089 Sum_probs=93.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC-------C--CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG-------M--DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~-------~--~~v~~v~~~~ 74 (448)
.++||+|||+||..++.+++.... ...|+....+.+|+.+...|.+...++...|.. + ..+..+|.+
T Consensus 124 ~v~~~~sGseA~~~al~~a~~~~~---~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~- 199 (433)
T 1z7d_A 124 KVLMMNTGAEANETAYKLCRKWGY---EVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYD- 199 (433)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHH---HTSCCCTTCCEEEEETTC--------------------------CEEEECTT-
T ss_pred eEEEeCCHHHHHHHHHHHHHHHhh---hccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCCC-
Confidence 478999999999999988764200 011221012344555556676666555554410 0 135556553
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccccc----CHHHHHHHHHHcCCEEEEecccccccccccc-hhhhh
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFD----PLDEIATVCEKYDLWMHVDACWGGSLIFSEK-YSFVL 149 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~----~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~-~~~~~ 149 (448)
|+++|+++++. .++++|+++...+++|.+. ++++|.++|++||+++++|++|.+ ...... +....
T Consensus 200 ----d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g-~g~~g~~~~~~~ 269 (433)
T 1z7d_A 200 ----DLEALEEELKD-----PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTG-LGRTGKLLCVHH 269 (433)
T ss_dssp ----CHHHHHHHHTS-----TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTT-TTTTSSSSGGGG
T ss_pred ----CHHHHHHHhCC-----CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccC-CCcCCcchhhHh
Confidence 89999999952 2477888877777789765 799999999999999999999974 211111 11111
Q ss_pred cCCCCccEEEECCccccCCC-CceEEEEEec
Q psy14299 150 KGINRANSVSWNPHKMLGAP-LQCSILLIKE 179 (448)
Q Consensus 150 ~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~ 179 (448)
.++ ..|+++ +.|++++. ...|+++.++
T Consensus 270 ~~~-~~di~t--~sK~l~~G~~~~G~v~~~~ 297 (433)
T 1z7d_A 270 YNV-KPDVIL--LGKALSGGHYPISAVLAND 297 (433)
T ss_dssp GTC-CCSEEE--ECGGGGTTSSCCEEEEECH
T ss_pred cCC-CCCEEE--ECccccCCCCCeEEEEECH
Confidence 122 368775 46998854 3588888765
No 179
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.74 E-value=1.4e-16 Score=161.32 Aligned_cols=288 Identities=11% Similarity=0.029 Sum_probs=173.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCc-EEEEecCCCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDN-VIRVKTNERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~-v~~v~~~~~g~id~e~ 82 (448)
..++|+|+|+++..++. +.. +++.|+++..+|.++...++..|. + +..+|.++++.++.+
T Consensus 97 ~v~~~~G~~~al~~~~~-~~~--------------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~- 157 (400)
T 3asa_A 97 EIFISDGAKVDLFRLLS-FFG--------------PNQTVAIQDPSYPAYLDIARLTGA---KEIIALPCLQENAFFPE- 157 (400)
T ss_dssp GEEEESCHHHHHHHHHH-HHC--------------SSCEEEEEESCCHHHHHHHHHTTC---SEEEEEECCGGGTTCCC-
T ss_pred HEEEccChHHHHHHHHH-HcC--------------CCCEEEECCCCcHHHHHHHHHcCC---cceEecccchhcCcccC-
Confidence 57899999999776442 222 456788888999999999998888 6 888888754433321
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCC---Ccc
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGIN---RAN 156 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~---~aD 156 (448)
+++ + .++++|++++++|+||.+.| +++|+++|++||+++++|++|+...... .....+..+. ..+
T Consensus 158 l~~-~-------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~ 228 (400)
T 3asa_A 158 FPE-D-------THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDP-SLPKSIFEIPDARFCA 228 (400)
T ss_dssp CCT-T-------CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCT-TSCSSGGGSTTGGGTE
T ss_pred hhh-c-------cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCC-CCCCchhhCCCCCCce
Confidence 221 1 25778999999999999887 6678899999999999999998532210 0001111111 134
Q ss_pred EEEECCccccCCCC-ceEEEEEeccchhhhhccCCcccccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHH
Q psy14299 157 SVSWNPHKMLGAPL-QCSILLIKEKGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 235 (448)
Q Consensus 157 ~~~~s~hK~l~~P~-g~G~l~vr~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ 235 (448)
+++.+++|+++.|. .+|+++++++ ..... . . + .-.++.
T Consensus 229 i~~~s~sK~~g~~GlriG~~~~~~~-~~~~~---~---~---~---------------------~~~~~~---------- 267 (400)
T 3asa_A 229 IEINSFSKPLGFAGIRLGWTVIPQE-LTYAD---G---H---F---------------------VIQDWE---------- 267 (400)
T ss_dssp EEEEECCGGGTTTTCCCEEEECCTT-CBCTT---S---C---B---------------------HHHHHH----------
T ss_pred EEEecchhhcCCcchheeEEeeChh-hccch---h---h---h---------------------HHHHHH----------
Confidence 78899999997442 4788877543 21100 0 0 0 000000
Q ss_pred HHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCcc
Q psy14299 236 RHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 315 (448)
Q Consensus 236 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 315 (448)
. ... . .+.+.+.+.+.++..+++.. .
T Consensus 268 -~-~~~-~------------------------------------------------~~~~~~~~~~~a~~~~l~~~---~ 293 (400)
T 3asa_A 268 -R-FLS-T------------------------------------------------TFNGASIPAQEAGVAGLSIL---P 293 (400)
T ss_dssp -H-HHH-H------------------------------------------------HCCCCCHHHHHHHHHHHHHT---T
T ss_pred -H-Hhc-c------------------------------------------------CccCCChHHHHHHHHHhCcH---H
Confidence 0 000 0 00011122223333344432 5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhC-CcEEEE
Q psy14299 316 FRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLG-GTLMIG 394 (448)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~-g~~~~~ 394 (448)
++++.++..++++++.+.|+++ |+++. .+.....+.+.+.|.+.+. .++.+.|.++ | +.+.
T Consensus 294 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~~---------------~~~~~~l~~~~g-v~v~ 355 (400)
T 3asa_A 294 QLEAIHYYRENSDLLRKALLAT-GFEVF-GGEHAPYLWVKPTQANISD---------------RDLFDFFLREYH-IAIT 355 (400)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHT-TCEEE-ECSSSSEEEEECCCTTCCT---------------TTHHHHHHHHHS-EECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCeee-CCCCceEEEEeccCCCCCH---------------HHHHHHHHHhCC-EEEe
Confidence 6778888889999999999998 89886 4333334444312322221 1466777654 7 5555
Q ss_pred eeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14299 395 YQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEV 436 (448)
Q Consensus 395 ~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~ 436 (448)
++...+...++++|+++ ++++++++++++.|+++.++.
T Consensus 356 ~g~~f~~~~~~~iRis~----~~~~e~i~~~l~~l~~~~~~~ 393 (400)
T 3asa_A 356 PGIGFGRSGSGFVRFSS----LGKREDILAACERLQMAPALQ 393 (400)
T ss_dssp EGGGGCGGGTTCEEEEC----CSCHHHHHHHHHHHHC-----
T ss_pred ChhHhCCCCCCEEEEEe----eCCHHHHHHHHHHHHHHHHhh
Confidence 54332222247899996 468999999999999887653
No 180
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.74 E-value=8.7e-17 Score=164.31 Aligned_cols=284 Identities=10% Similarity=0.061 Sum_probs=174.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
..+||+|+++++.. +..... +++.|+++...|.++...++..|... .+++.++.++
T Consensus 121 ~i~~t~G~~~al~~-l~~l~~--------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 185 (432)
T 3ei9_A 121 DVFVSDGAKCDISR-LQVMFG--------------SNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTP 185 (432)
T ss_dssp GEEEESCHHHHHHH-HHHHHC--------------TTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCG
T ss_pred eEEECCChHHHHHH-HHHHcC--------------CCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCc
Confidence 57899999999765 333332 56678999999999999999888522 1577888875
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchh-hhhc
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYS-FVLK 150 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~-~~~~ 150 (448)
++.++.+ +++ ..++++|++++++|++|.+.+ +++|+++|++||+++++|++|+.+........ ..+.
T Consensus 186 ~~~~~~~-l~~--------~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~ 256 (432)
T 3ei9_A 186 ENGFFPD-LST--------VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIP 256 (432)
T ss_dssp GGTTSCC-GGG--------CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGST
T ss_pred ccCCcCC-hhh--------CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcC
Confidence 4333222 221 135788999999999998865 67777889999999999999996543211101 0111
Q ss_pred CCCCccEEEECCccccCCC-CceEEEEEeccch-------hhhhccCCcccccccCcccccccCCCCCcccCCCCchhHH
Q psy14299 151 GINRANSVSWNPHKMLGAP-LQCSILLIKEKGL-------LHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFK 222 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~~~-------~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (448)
+....++++.+++|+++.| ..+|+++++++.. ....... ....
T Consensus 257 ~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~---------------------------- 307 (432)
T 3ei9_A 257 GAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRI-ICTC---------------------------- 307 (432)
T ss_dssp TGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHH-HHHS----------------------------
T ss_pred CCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHH-hccc----------------------------
Confidence 1123568899999999743 4578877755421 0100000 0000
Q ss_pred HHHHHHHhChHHHHHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhH
Q psy14299 223 LWLMWKARGNLGFRHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAF 302 (448)
Q Consensus 223 ~~~~~~~~g~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (448)
..+.+.+.+.
T Consensus 308 ----------------------------------------------------------------------~~~~~~~~~~ 317 (432)
T 3ei9_A 308 ----------------------------------------------------------------------FNGASNISQA 317 (432)
T ss_dssp ----------------------------------------------------------------------CCCSCHHHHH
T ss_pred ----------------------------------------------------------------------cCCCCHHHHH
Confidence 0000011111
Q ss_pred HHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHH
Q psy14299 303 KLWLMWKARGNLGFRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIK 382 (448)
Q Consensus 303 ~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 382 (448)
++..++...+.+.++++.++..++++++.+.|+++ |+++. .+.....+.+.+ + +.. ..++.
T Consensus 318 a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~-~-~~~---------------~~~~~ 378 (432)
T 3ei9_A 318 GALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVY-GGKNAPYVWVHF-P-NQS---------------SWDVF 378 (432)
T ss_dssp HHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEE-ECSSSSEEEEEC-T-TSC---------------HHHHH
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-Cceec-CCCcceEEEEEC-C-CCC---------------HHHHH
Confidence 11112211122346677888899999999999998 88876 433444333332 2 221 23667
Q ss_pred HHHHhC-CcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHH
Q psy14299 383 EKLVLG-GTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 383 ~~L~~~-g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~ 434 (448)
+.|+++ | +.+.++...+...++++|+++. +++++++++++.|++-.+
T Consensus 379 ~~ll~~~g-v~v~~g~~f~~~~~~~iRis~~----~~~e~l~~~l~rl~~~~~ 426 (432)
T 3ei9_A 379 AEILEKTH-VVTTPGSGFGPGGEGFVRVSAF----GHRENILEACRRFKQLYK 426 (432)
T ss_dssp HHHHHHHC-EECEEGGGGCGGGTTEEEEECC----SCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHCC-EEEeCchHhCCCCCCEEEEEec----CCHHHHHHHHHHHHHHhh
Confidence 777765 7 5565554433323489999984 489999999998887543
No 181
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.73 E-value=1.8e-17 Score=171.72 Aligned_cols=143 Identities=14% Similarity=0.097 Sum_probs=112.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH----HHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA----HWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~----~~~g~~~~~v~~v~~~~~g~id 79 (448)
..+++++|++++..++. .. .+++.|+++...|.++...+ +..|. +++.++.+ |
T Consensus 150 ~~i~~~sGt~al~~~l~-~~--------------~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~---~v~~v~~~-----d 206 (464)
T 1ibj_A 150 RAFCFTSGMAALSAVTH-LI--------------KNGEEIVAGDDVYGGSDRLLSQVVPRSGV---VVKRVNTT-----K 206 (464)
T ss_dssp EEEEESSHHHHHHHHHT-TS--------------CTTCEEEEESSCCHHHHHHHHHTSGGGTC---EEEEECTT-----S
T ss_pred eEEEECCHHHHHHHHHH-Hh--------------CCCCEEEEECCCchhHHHHHHHHHHHcCC---EEEEeCCC-----C
Confidence 46888999998765542 11 26677888999999887653 44566 68888865 8
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
+++|++++++ ++++|++++++|++|.+.|+++|+++|++||+++++|++|+.+....+. . . .+|+++
T Consensus 207 ~~~l~~~i~~------~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~-----~-~-~~div~ 273 (464)
T 1ibj_A 207 LDEVAAAIGP------QTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPL-----E-L-GADIVM 273 (464)
T ss_dssp HHHHHHHCCS------SEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGG-----G-T-TCSEEE
T ss_pred HHHHHHHhcc------CceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChh-----h-c-CCEEEE
Confidence 9999998853 5899999999999999999999999999999999999999876542111 1 1 479999
Q ss_pred ECCccccCCCCce--EEEEEeccch
Q psy14299 160 WNPHKMLGAPLQC--SILLIKEKGL 182 (448)
Q Consensus 160 ~s~hK~l~~P~g~--G~l~vr~~~~ 182 (448)
.++||++++|.|+ |+++++++.+
T Consensus 274 ~S~sK~~~g~~Gl~~G~l~~~~~~l 298 (464)
T 1ibj_A 274 HSATKFIAGHSDVMAGVLAVKGEKL 298 (464)
T ss_dssp EETTTTTTCSSCCCCEEEEECSHHH
T ss_pred ECCcccccCCCCCcEEEEEEChHHH
Confidence 9999999999876 8888875443
No 182
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.73 E-value=2.4e-16 Score=159.78 Aligned_cols=156 Identities=11% Similarity=0.016 Sum_probs=99.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEec-CCCchHHHHHHHHhC----CCCCcEEEEecCC-CCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTS-EDSHYSMLKAAHWLG----IGMDNVIRVKTNE-RGQ 77 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~-~~~H~s~~~~~~~~g----~~~~~v~~v~~~~-~g~ 77 (448)
..++|+|||+++.+++.+++.+ |-. .....|+++ ..+|..+...+...+ .+. .+..++.+. ++.
T Consensus 100 ~i~~t~G~t~al~~~~~~l~~~--------gd~-~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 169 (417)
T 3g7q_A 100 NIALTNGSQSAFFYLFNLFAGR--------RAD-GSTKKVLFPLAPEYIGYADSGLEDDLFVSARP-NIELLPEGQFKYH 169 (417)
T ss_dssp GEEEESCHHHHHHHHHHHHSBC-------------CCBEEEESSCCCHHHHHC-----CCEEECCC-EEEEEGGGEEEEE
T ss_pred cEEEeCCcHHHHHHHHHHHcCC--------Ccc-CCcceEEEeCCCccccchhhccchhhhccccC-cccccCCcccccc
Confidence 5799999999999988776542 100 011167776 677777766554322 211 344444331 357
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCC
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINR 154 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~ 154 (448)
+|+++|+ +. .++++|++++++|++|.+.| +++|.++|++||+++++|++|+.......... .......
T Consensus 170 ~d~~~l~--~~------~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~ 240 (417)
T 3g7q_A 170 VDFEHLH--IG------EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSE-ARPLWNP 240 (417)
T ss_dssp CCGGGCC--CC------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSC-CCCCCCT
T ss_pred cCHHHhc--cc------cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccc-cccCCCC
Confidence 8999987 32 25889999999999999988 89999999999999999999975321111000 0011123
Q ss_pred ccEEEECCccccCCCCceEEEEEe
Q psy14299 155 ANSVSWNPHKMLGAPLQCSILLIK 178 (448)
Q Consensus 155 aD~~~~s~hK~l~~P~g~G~l~vr 178 (448)
.++++.+++|++.....+|+++..
T Consensus 241 ~~i~~~s~sK~~~~G~r~G~~~~~ 264 (417)
T 3g7q_A 241 NIILCMSLSKLGLPGSRCGIIIAN 264 (417)
T ss_dssp TEEEEEESGGGTCTTSCCEEEECC
T ss_pred CEEEEEechhccCCCcceEEEEeC
Confidence 578889999964433457776653
No 183
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.73 E-value=1.4e-16 Score=167.98 Aligned_cols=159 Identities=13% Similarity=0.095 Sum_probs=120.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHh-cCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC----CCCCc
Q psy14299 4 KPFLLPGGSISNMYSICLARYR-LDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN----ERGQM 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~-~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~----~~g~i 78 (448)
..++|+|||+++.+++.+...+ +. .+++.|+++..+|.++...++..|. .+..++++ .++.+
T Consensus 166 ~i~~t~G~t~al~~~~~~l~~~~l~----------~~gd~Viv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~ 232 (533)
T 3f6t_A 166 DLFPTEGGTAAIVYAFHSLAENHLL----------KKGDKIAINEPIFTPYLRIPELKDY---ELVEVDLHSYEKNDWEI 232 (533)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHTTSS----------CTTCEEEEESSCCHHHHTSGGGGGS---EEEEECCCEETTTTSEE
T ss_pred eEEEECCHHHHHHHHHHHhhhhhcc----------CCcCEEEEcCCCcHHHHHHHHHcCC---eEEEEEecCCcccCCCC
Confidence 5899999999998887753222 11 2677899999999999999888888 68888874 35789
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHH---HHHHHHH-HcCCEEEEecccccccccccchhhhhcCCCC
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLD---EIATVCE-KYDLWMHVDACWGGSLIFSEKYSFVLKGINR 154 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~---~I~~ia~-~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~ 154 (448)
|+++|++++++ ++++|++++++|++|.+.|.+ +|+++|+ +||+++++|++|+............ ...
T Consensus 233 d~~~l~~~l~~------~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~---~~~ 303 (533)
T 3f6t_A 233 EPNEIEKLKDP------SIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSV---VPY 303 (533)
T ss_dssp CHHHHHHHSCT------TEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHH---SGG
T ss_pred CHHHHHHHhCC------CCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhc---CCC
Confidence 99999998853 588999999999999997766 7888888 6899999999998544321111111 113
Q ss_pred ccEEEECCccccCCCCc--eEEEEEeccchhhh
Q psy14299 155 ANSVSWNPHKMLGAPLQ--CSILLIKEKGLLHQ 185 (448)
Q Consensus 155 aD~~~~s~hK~l~~P~g--~G~l~vr~~~~~~~ 185 (448)
.++++.|++|.++. +| +|+++++++.....
T Consensus 304 ~~i~~~S~SK~~g~-~G~RiG~l~~~~~~~~~~ 335 (533)
T 3f6t_A 304 NTMLVYSYSKLFGC-TGWRLGVIALNEKNVFDD 335 (533)
T ss_dssp GEEEEEESHHHHTC-GGGCEEEEEEESSCHHHH
T ss_pred CEEEEecCcccCCC-cccceEEEEECcHHHHHH
Confidence 45889999999874 45 78888877644433
No 184
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.73 E-value=8.7e-16 Score=156.61 Aligned_cols=161 Identities=14% Similarity=0.082 Sum_probs=106.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC----------CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG----------MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~----------~~~v~~v~~~ 73 (448)
.++||+|||++|..++.+++.. ..+.+|+.+...|.+...++...|.. ...+..+|.+
T Consensus 106 ~v~~~~gg~ea~~~ai~~~~~~------------~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 173 (419)
T 2eo5_A 106 KVFFSNSGTEAIEASIKVVKNT------------GRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYP 173 (419)
T ss_dssp EEEEESSHHHHHHHHHHHHHTT------------SCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCC
T ss_pred EEEEeCchHHHHHHHHHHHHHh------------hCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCC
Confidence 5899999999999999887653 12345555667787776666554321 1247788876
Q ss_pred CCCC----------------cCHHHHH-HHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEe
Q psy14299 74 ERGQ----------------MICSFLE-QTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVD 132 (448)
Q Consensus 74 ~~g~----------------id~e~Le-~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD 132 (448)
.+.+ +|+++|+ +++++.. ...++++|+++..++++|.+.| +++|.++|++||+++|+|
T Consensus 174 ~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~-~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~D 252 (419)
T 2eo5_A 174 NPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV-PPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDD 252 (419)
T ss_dssp CSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC-CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEE
T ss_pred ccccccccccccccchhhHHHHHHHHHHHHHhhcc-CCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 5432 4788999 8887420 0024567777666667898776 999999999999999999
Q ss_pred cccccccccccchhhhhcCCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 133 ACWGGSLIFSEKYSFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 133 ~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
++|...............++ ..|++++ .|+++++ .++|+++.+++
T Consensus 253 E~~~~~g~~g~~~~~~~~~~-~~d~~t~--sK~~~~G~~riG~~~~~~~ 298 (419)
T 2eo5_A 253 EVQMGLGRTGKLFAIENFNT-VPDVITL--AKALGGGIMPIGATIFRKD 298 (419)
T ss_dssp CTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGGGGTTTSCCEEEEEEGG
T ss_pred ccccCCccCcchhhHHhcCC-CCCEEEe--cccccCCccceEEEEEchH
Confidence 99984221111011111122 3577654 5988876 78899888664
No 185
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.73 E-value=5.8e-16 Score=159.20 Aligned_cols=161 Identities=16% Similarity=0.069 Sum_probs=104.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC-------CC--CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI-------GM--DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~-------~~--~~v~~v~~~~ 74 (448)
.++||+|||+||..++.+++.... .+.|+....+.+|+.+...|.+...++...|. ++ ..+..+|.+
T Consensus 135 ~v~~~~sGseA~~~al~~~~~~~~---~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~- 210 (439)
T 2oat_A 135 KVLPMNTGVEAGETACKLARKWGY---TVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYN- 210 (439)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHH---HTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSS-
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhh---hccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCC-
Confidence 478999999999999988774200 01122101235566666777777666655441 10 246667654
Q ss_pred CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccccc----CHHHHHHHHHHcCCEEEEecccccccccccchhhhhc
Q psy14299 75 RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFD----PLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 75 ~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~----~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
|+++|++++++ .++++|+++...+++|.+. ++++|.++|++||+++++|++|.+.......+.....
T Consensus 211 ----d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~ 281 (439)
T 2oat_A 211 ----DLPALERALQD-----PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYE 281 (439)
T ss_dssp ----CHHHHHHHTTS-----TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGG
T ss_pred ----CHHHHHHHhCC-----CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHh
Confidence 89999999852 2467888877777789776 7999999999999999999999642111111111112
Q ss_pred CCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 151 GINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
++ ..|++ +++|++++. ...|+++++++
T Consensus 282 ~~-~~Di~--t~sK~l~~G~~~~G~v~~~~~ 309 (439)
T 2oat_A 282 NV-RPDIV--LLGKALSGGLYPVSAVLCDDD 309 (439)
T ss_dssp TC-CCSEE--EECGGGGTTSSCCEEEEECHH
T ss_pred CC-CCcEE--EecccccCCCCCeEEEEECHH
Confidence 22 36876 456998864 45888888653
No 186
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.73 E-value=5.3e-15 Score=152.20 Aligned_cols=165 Identities=14% Similarity=0.107 Sum_probs=100.8
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCCC
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNER 75 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~~ 75 (448)
++||+|||+||..++..++.... ..|.+ ..+.+|+.+...|.....+....+... ..+..++....
T Consensus 110 v~~~~ggseA~~~al~~~~~~~~----~~g~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (452)
T 3n5m_A 110 IFFSNSGSEANETAFKIARQYYA----QKGEP-HRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDC 184 (452)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHH----TTTCT-TCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCT
T ss_pred EEEeCchHHHHHHHHHHHHHHHH----hcCCC-CCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCcc
Confidence 89999999999999998884310 01110 133455556666655544444333210 12444543221
Q ss_pred CC------------cCHHHHHHHHHHhhhcCCCcEEEEEecc-CCccccccC----HHHHHHHHHHcCCEEEEecccccc
Q psy14299 76 GQ------------MICSFLEQTIQTSLAEKKIPLFVNATAG-TTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGS 138 (448)
Q Consensus 76 g~------------id~e~Le~~l~~~~~~~~~~~lVv~~~~-~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~ 138 (448)
.+ .++++|++++++. ...++++|+++.+ .+ +|.+.| +++|.++|++||+++++|++|.+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~ 261 (452)
T 3n5m_A 185 YRMPGIERENIYDVECVKEVDRVMTWE--LSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGF 261 (452)
T ss_dssp TTSTTTTTSCGGGCHHHHHHHHHHHHH--CGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred ccCccCCchhhHHHHHHHHHHHHHHhc--CCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCC
Confidence 11 1289999999731 1124667777777 68 998887 999999999999999999998743
Q ss_pred cccccchhhhhcCCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 139 LIFSEKYSFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 139 ~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
......+.....++ ..|++++ .|.+++. ..+|+++.+++
T Consensus 262 g~~g~~~~~~~~~~-~~di~t~--sK~l~~G~~~ig~~~~~~~ 301 (452)
T 3n5m_A 262 GRTGKAFGFMNYDV-KPDIITM--AKGITSAYLPLSATAVKRE 301 (452)
T ss_dssp TTTSSSSGGGGTTC-CCSEEEE--CGGGGTTSSCCEEEEEEHH
T ss_pred CcccccchhhhcCC-CCCEEee--cccccCCCcceEEEEECHH
Confidence 21111111111122 2577775 4887765 66788877554
No 187
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.73 E-value=9.3e-17 Score=161.65 Aligned_cols=139 Identities=12% Similarity=0.111 Sum_probs=105.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCC---CchHHHHHHHHhCCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSED---SHYSMLKAAHWLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~---~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~ 80 (448)
..++|+|||+++..++.++ + ++.|+++.. .|+++.+.++..|. +++.+ .|+
T Consensus 78 ~~~~~~ggt~a~~~~~~~~--~--------------gd~Vl~~~~~y~~~~~~~~~~~~~g~---~~~~v-------~d~ 131 (374)
T 2aeu_A 78 KCVGFNRTSSAILATILAL--K--------------PKKVIHYLPELPGHPSIERSCKIVNA---KYFES-------DKV 131 (374)
T ss_dssp EEEEESSHHHHHHHHHHHH--C--------------CSEEEEECSSSSCCTHHHHHHHHTTC---EEEEE-------SCH
T ss_pred eEEEEcChHHHHHHHHHhC--C--------------CCEEEEecCCCCccHHHHHHHHHcCc---EEEEe-------CCH
Confidence 4689999999999888765 3 245667766 46676667777787 66666 388
Q ss_pred HHHHHHHHHhhhcCCCcEE-EEEeccCCccc-cccCHHHHHHHHHHcCCEEEEecccccccc-cccchhhhhcCCCCccE
Q psy14299 81 SFLEQTIQTSLAEKKIPLF-VNATAGTTVLG-AFDPLDEIATVCEKYDLWMHVDACWGGSLI-FSEKYSFVLKGINRANS 157 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~l-Vv~~~~~t~tG-~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~-~~~~~~~~~~~~~~aD~ 157 (448)
++|+++ . .++++ |++++++|++| ...|+++|.++|++||+++++|++|+.+.. +...... .. . ..|+
T Consensus 132 ~~l~~~-~------~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~-~~-~-~~di 201 (374)
T 2aeu_A 132 GEILNK-I------DKDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPA-LK-L-GADL 201 (374)
T ss_dssp HHHHTT-C------CTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCH-HH-H-TCSE
T ss_pred HHHHhc-C------CCccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCc-cc-c-CCcE
Confidence 888776 2 25788 88999999999 899999999999999999999999887641 1100001 11 1 3689
Q ss_pred EEECCccccCCCCceEEEEEec
Q psy14299 158 VSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 158 ~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
++.|+||++++| +.|+++.++
T Consensus 202 ~~~S~sK~l~g~-~~G~~~~~~ 222 (374)
T 2aeu_A 202 VVTSTDKLMEGP-RGGLLAGKK 222 (374)
T ss_dssp EEEETTSSSSSC-SCEEEEEEH
T ss_pred EEecCcccccCc-ceEEEEECH
Confidence 999999998876 788887765
No 188
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.72 E-value=3.7e-16 Score=158.56 Aligned_cols=154 Identities=12% Similarity=-0.000 Sum_probs=112.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec-CCCCCcCHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT-NERGQMICSF 82 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~-~~~g~id~e~ 82 (448)
..++|+|||+++..++.+..+ +++.|+++...|.++...++..|. +++.+|. ++++.+|+++
T Consensus 103 ~i~~t~g~~~al~~~~~~~~~--------------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~d~~~ 165 (413)
T 3t18_A 103 SAIATPGGTGAIRSAIFSYLD--------------EGDPLICHDYYWAPYRKICEEFGR---NFKTFEFFTDDFAFNIDV 165 (413)
T ss_dssp EEEEESHHHHHHHHHHHHHCC--------------SSCEEEEESSCCTHHHHHHHHHTC---EEEEECCBCTTSSBCHHH
T ss_pred cEEEcCccHHHHHHHHHHhcC--------------CCCEEEECCCCcccHHHHHHHhCC---eEEEeeccCCCCCcCHHH
Confidence 589999999999888876543 567889999999999999999999 7889998 4567999999
Q ss_pred HHHHHHHhhhcCCCcE-EEEEecc-CCccccccCHHHHH---HHHH------HcCCEEEEecccccccccccchhh---h
Q psy14299 83 LEQTIQTSLAEKKIPL-FVNATAG-TTVLGAFDPLDEIA---TVCE------KYDLWMHVDACWGGSLIFSEKYSF---V 148 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~-lVv~~~~-~t~tG~~~~l~~I~---~ia~------~~g~~l~VD~A~~~~~~~~~~~~~---~ 148 (448)
|++++++.... +++ +++++.+ +|+||.+.|.+++. ++|+ +||+++++|++|............ .
T Consensus 166 l~~~l~~~~~~--~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~ 243 (413)
T 3t18_A 166 YKEAIDEGIRD--SDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEK 243 (413)
T ss_dssp HHHHHHHHHHH--CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGG
T ss_pred HHHHHHHHhhc--CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHH
Confidence 99999753211 355 7778888 89999998876655 5555 899999999998654432111111 1
Q ss_pred hcCCCCcc---EEEECCccccCCC-CceEEEEE
Q psy14299 149 LKGINRAN---SVSWNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 149 ~~~~~~aD---~~~~s~hK~l~~P-~g~G~l~v 177 (448)
..++. -| +++.|++|.++.| ..+|+++.
T Consensus 244 ~~~~~-~~~~~i~~~S~sK~~~~~G~riG~~~~ 275 (413)
T 3t18_A 244 FSNLP-RNLFVVVAFSMSKSHTAYGLRSGAAVG 275 (413)
T ss_dssp GTTCC-TTEEEEEEEEHHHHTTCGGGCCEEEEE
T ss_pred HhhcC-CCeeEEEEEecCccCCCcCcCcEEEEE
Confidence 11111 13 5667999999854 23677766
No 189
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.72 E-value=4.6e-17 Score=165.08 Aligned_cols=155 Identities=11% Similarity=0.041 Sum_probs=113.0
Q ss_pred cEEE--eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCC-----eEEEecCCCchHHHHHHHHhCCCCCc-EEEEecC--
Q psy14299 4 KPFL--LPGGSISNMYSICLARYRLDPDTKRKGLSHLPP-----LCMFTSEDSHYSMLKAAHWLGIGMDN-VIRVKTN-- 73 (448)
Q Consensus 4 ~g~~--t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~-----~~Vl~~~~~H~s~~~~~~~~g~~~~~-v~~v~~~-- 73 (448)
..++ |+|||+|+..++..++.. .++ +.|+++..+|.++...++..|. + ++.++.+
T Consensus 99 ~v~~~~t~gg~~a~~~~~~~~~~~------------~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~ 163 (412)
T 1ajs_A 99 RVGGVQSLGGTGALRIGAEFLARW------------YNGTNNKDTPVYVSSPTWENHNGVFTTAGF---KDIRSYRYWDT 163 (412)
T ss_dssp CEEEEEEEHHHHHHHHHHHHHHHH------------SSSSSCCCSCEEEEESCCTHHHHHHHHTTC---SCEEEEECEET
T ss_pred cEEEEECCCcHHHHHHHHHHHHHh------------CcCcCCCCCeEEEcCCCcHHHHHHHHHcCC---ceeEEEeeecC
Confidence 4678 999999998886543321 144 5688888999999999999888 7 8888873
Q ss_pred CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccc---cchhh
Q psy14299 74 ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFS---EKYSF 147 (448)
Q Consensus 74 ~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~---~~~~~ 147 (448)
+++.+|+++|++++++. +.+++++++++++|+||.+.| +++|.++|++||+++++|++|....... +....
T Consensus 164 ~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~ 240 (412)
T 1ajs_A 164 EKRGLDLQGFLSDLENA---PEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAI 240 (412)
T ss_dssp TTTEECHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHH
T ss_pred CCCccCHHHHHHHHHhC---CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHH
Confidence 56789999999999752 234678888999999998854 6789999999999999999976543311 10011
Q ss_pred h-hcCCCCccEEEECCccccCCCCc--eEEEEE
Q psy14299 148 V-LKGINRANSVSWNPHKMLGAPLQ--CSILLI 177 (448)
Q Consensus 148 ~-~~~~~~aD~~~~s~hK~l~~P~g--~G~l~v 177 (448)
. +.....-++++.+++|.++. .| +|++++
T Consensus 241 ~~~~~~~~~~i~~~s~sK~~~~-~G~riG~~~~ 272 (412)
T 1ajs_A 241 RYFVSEGFELFCAQSFSKNFGL-YNERVGNLTV 272 (412)
T ss_dssp HHHHHTTCCEEEEEECTTTSCC-GGGCEEEEEE
T ss_pred HHHhccCCcEEEEEecccccCC-CCcceEEEEE
Confidence 0 11111123778899998864 45 788877
No 190
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.57 E-value=3.1e-19 Score=180.22 Aligned_cols=157 Identities=12% Similarity=0.054 Sum_probs=116.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC-CC--CCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN-ER--GQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~-~~--g~id~ 80 (448)
..++|+|||+++..++.++.. +++.|+++...|.++...++..|. +++.++.+ ++ +.+|+
T Consensus 91 ~v~~~~g~~~a~~~~~~~~~~--------------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~g~~~~d~ 153 (392)
T 3b1d_A 91 DIVFVEGVVPAISIAIQAFTK--------------EGEAVLINSPVYPPFARSVRLNNR---KLVSNSLKEENGLFQIDF 153 (392)
Confidence 468999999999888877644 456788899999999999888887 67778774 32 45899
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCC----C
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGI----N 153 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~----~ 153 (448)
++|++.+++ .++++|++++++|++|.+.| +++|.++|++||+++++|++|+........... +..+ .
T Consensus 154 ~~l~~~l~~-----~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~ 227 (392)
T 3b1d_A 154 EQLENDIVE-----NDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVS-FNTVSPDFK 227 (392)
Confidence 999999863 14678888999999998865 999999999999999999999875542111000 1111 1
Q ss_pred CccEEEECCccccCCC-CceEEEEEeccchh
Q psy14299 154 RANSVSWNPHKMLGAP-LQCSILLIKEKGLL 183 (448)
Q Consensus 154 ~aD~~~~s~hK~l~~P-~g~G~l~vr~~~~~ 183 (448)
..++++.+++|+++.| ..+|+++++++++.
T Consensus 228 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 258 (392)
T 3b1d_A 228 DFALVLSSATKTFNIAGTKNSYAIIENPTLC 258 (392)
Confidence 2357788999999744 35787777654343
No 191
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.72 E-value=1e-15 Score=156.25 Aligned_cols=171 Identities=15% Similarity=0.114 Sum_probs=96.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------C--cEEEEec
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------D--NVIRVKT 72 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~--~v~~v~~ 72 (448)
.++||+|||++|..++.+++... ...|-+ ..+.+|+.+...|.....+....+... . .+..+|.
T Consensus 91 ~v~~~~gg~ea~~~al~~~~~~~----~~~g~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (430)
T 3i4j_A 91 RFWAVSGGSEATESAVKLARQYH----VERGEP-GRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPK 165 (430)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH----HHTTCT-TCCEEEEETTC-------------------------CGGGSCEECC
T ss_pred EEEEeCcHHHHHHHHHHHHHHHH----HhcCCC-CCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCC
Confidence 58999999999999998887531 111211 123344444545544433333222110 0 2334554
Q ss_pred CCC---CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCC-ccccccC----HHHHHHHHHHcCCEEEEecccccccccccc
Q psy14299 73 NER---GQMICSFLEQTIQTSLAEKKIPLFVNATAGTT-VLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEK 144 (448)
Q Consensus 73 ~~~---g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t-~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~ 144 (448)
+.. +..|+++|++++++.. ..++.+|+++..++ ++|.+.+ +++|.++|++||+++|+|++|.........
T Consensus 166 ~~~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~ 243 (430)
T 3i4j_A 166 PDPARNGAEDAEGLRALLEREG--PETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSP 243 (430)
T ss_dssp CCTTSCHHHHHTHHHHHHHHHC--GGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS
T ss_pred CcccchhhHHHHHHHHHHHhcC--CCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccch
Confidence 433 3457799999997521 12456777777777 8898877 999999999999999999998743211111
Q ss_pred hhhhhc-CCCCccEEEECCccccCCC-CceEEEEEeccchhhh
Q psy14299 145 YSFVLK-GINRANSVSWNPHKMLGAP-LQCSILLIKEKGLLHQ 185 (448)
Q Consensus 145 ~~~~~~-~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~~~~~~ 185 (448)
...... ++ ..|.++++ |.+++. ..+|+++.++ ++...
T Consensus 244 ~~~~~~~~~-~~di~t~s--K~l~~G~~r~G~~~~~~-~i~~~ 282 (430)
T 3i4j_A 244 LALSRWSGV-TPDIAVLG--KGLAAGYAPLAGLLAAP-QVYET 282 (430)
T ss_dssp SGGGGTTTC-CCSEEEEC--GGGTTTSSCCEEEEECH-HHHHH
T ss_pred hhhhhhcCC-CCcEEEEc--ccccCCccccEEEEECH-HHHHH
Confidence 111111 22 25777654 998853 3468877744 44333
No 192
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.72 E-value=9.6e-16 Score=156.98 Aligned_cols=161 Identities=14% Similarity=0.042 Sum_probs=104.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC--C---------cEEEEec
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM--D---------NVIRVKT 72 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~--~---------~v~~v~~ 72 (448)
..+||+|||++|..++.+++... .++.+|+.+...|.+...++...+... . .+..+|.
T Consensus 106 ~v~~~~ggsea~~~al~~~~~~~-----------~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (439)
T 3dxv_A 106 KIWFGHSGSDANEAAYRAIVKAT-----------GRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPY 174 (439)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH-----------SCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSS
T ss_pred EEEEeCCHHHHHHHHHHHHHHHh-----------CCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCC
Confidence 68999999999999998876531 145677778888877776655443311 0 0123343
Q ss_pred CCCCCc-----CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccccccc
Q psy14299 73 NERGQM-----ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSE 143 (448)
Q Consensus 73 ~~~g~i-----d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~ 143 (448)
+.++.- |+++|++++++. ...++++|++..+.+++|.+.| +++|.++|++||+++++|++|++......
T Consensus 175 ~~~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~ 252 (439)
T 3dxv_A 175 RPYRNDPTGDAILTLLTEKLAAV--PAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGR 252 (439)
T ss_dssp SCBTTBTTSHHHHHHHHHHHHTS--CTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSS
T ss_pred CcccccccHHHHHHHHHHHHHhc--CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch
Confidence 322222 789999999521 1235788888888888999988 99999999999999999999973211111
Q ss_pred chhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 144 KYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 144 ~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
.......++ ..|.++ +.|.+++...+|+++.+++
T Consensus 253 ~~~~~~~~~-~~di~s--~sK~~~~G~riG~~~~~~~ 286 (439)
T 3dxv_A 253 LHCFEHEGF-VPDILV--LGKGLGGGLPLSAVIAPAE 286 (439)
T ss_dssp SSGGGGTTC-CCSEEE--ECGGGGTTSCCEEEEEEHH
T ss_pred hhHHHhcCC-CCCEEE--EcchhcCCcceEEEEECHH
Confidence 011111122 257774 5698885445788877553
No 193
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.72 E-value=4.2e-17 Score=164.29 Aligned_cols=156 Identities=14% Similarity=0.071 Sum_probs=115.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec--CCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT--NERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~--~~~g~id~e 81 (448)
..++|+|||+++..++.....- .+++.|+++...|.++...++..|. +++.+|. ++++.+|++
T Consensus 97 ~i~~t~g~~~a~~~~~~~~~~~------------~~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~ 161 (397)
T 3fsl_A 97 ATIQTLGGSGALKVGADFLKRY------------FPESGVWVSDPTWENHVAIFAGAGF---EVSTYPWYDEATNGVRFN 161 (397)
T ss_dssp EEEEESHHHHHHHHHHHHHHHH------------CTTCCEEEESSCCHHHHHHHHHTTC---CEEEECCEETTTTEECHH
T ss_pred EEEEcCCcHHHHHHHHHHHHhc------------CCCCeEEEeCCCchhHHHHHHHcCC---ceEEEeeeeccCCcCcHH
Confidence 5799999999998886432211 1566788999999999999999998 7888888 457899999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHcCCEEEEecccccccccc--cchh-hhhcCCCCc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKYDLWMHVDACWGGSLIFS--EKYS-FVLKGINRA 155 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~--~~~~-~~~~~~~~a 155 (448)
+|++.+++. ..+++++++++++|+||.+ +++++|+++|++||+++++|++|+...... +... ....+....
T Consensus 162 ~l~~~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
T 3fsl_A 162 DLLATLKTL---QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLP 238 (397)
T ss_dssp HHHHHHTTC---CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCC
T ss_pred HHHHHHHhC---CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCC
Confidence 999999742 2357889999999999988 456699999999999999999988665421 0000 001111223
Q ss_pred cEEEECCccccCCC-CceEEEEE
Q psy14299 156 NSVSWNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 156 D~~~~s~hK~l~~P-~g~G~l~v 177 (448)
.+++.|++|.++.| ..+|++++
T Consensus 239 ~i~~~S~SK~~~~~G~riG~~~~ 261 (397)
T 3fsl_A 239 ALVSNSFSKIFSLYGERVGGLSV 261 (397)
T ss_dssp EEEEEECTTTTTCGGGCCEEEEE
T ss_pred EEEEecccccccCcCCCeeEEEE
Confidence 57778899998743 23677765
No 194
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.72 E-value=2.8e-16 Score=155.07 Aligned_cols=140 Identities=11% Similarity=-0.023 Sum_probs=108.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+|+++..++.++ ++.|+++ .+|.++...++..|. +++.+|.++++.+|+++|
T Consensus 78 ~v~~~~G~~~al~~~~~~~-----------------gd~Vl~~-p~y~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l 136 (335)
T 1uu1_A 78 NVSVGNGADEIIYVMMLMF-----------------DRSVFFP-PTYSCYRIFAKAVGA---KFLEVPLTKDLRIPEVNV 136 (335)
T ss_dssp GEEEESSHHHHHHHHHHHS-----------------SEEEECS-SSCHHHHHHHHHHTC---EEEECCCCTTSCCCCCCC
T ss_pred HEEEcCChHHHHHHHHHHh-----------------CCcEEEC-CCcHHHHHHHHHcCC---eEEEeccCCCCCCCHHHc
Confidence 5789999999988887654 2458888 999999999999998 788899887778888877
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
+ ++++|++++++|++|.+.|.+++.++++.+| ++++|++|+..... +... .+. ....++++.+++
T Consensus 137 -----~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~-~~~~-~~~-~~~~~i~~~s~s 201 (335)
T 1uu1_A 137 -----G------EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGE-SYVD-FLK-KYENLAVIRTFS 201 (335)
T ss_dssp -----C------TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCC-CCGG-GGG-TCSSEEEEEEST
T ss_pred -----C------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcch-hHHH-Hhh-hCCCEEEEecch
Confidence 2 4789999999999999999999999999999 99999999853211 1011 111 123568889999
Q ss_pred cccCCCC-ceEEEEEec
Q psy14299 164 KMLGAPL-QCSILLIKE 179 (448)
Q Consensus 164 K~l~~P~-g~G~l~vr~ 179 (448)
|+++.|. .+|++++++
T Consensus 202 K~~g~~G~r~G~~~~~~ 218 (335)
T 1uu1_A 202 KAFSLAAQRVGYVVASE 218 (335)
T ss_dssp TTTTCGGGCCEEEEECH
T ss_pred hhcCCcccCeEEEEeCH
Confidence 9987442 378888843
No 195
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.71 E-value=4.2e-17 Score=165.49 Aligned_cols=154 Identities=11% Similarity=0.011 Sum_probs=109.6
Q ss_pred cEEE--eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec-CC-CCCcC
Q psy14299 4 KPFL--LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT-NE-RGQMI 79 (448)
Q Consensus 4 ~g~~--t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~-~~-~g~id 79 (448)
..++ |+|||+++.+++...+.- .+++.|+++...|.++...++..|. +++.+|. ++ ++.+|
T Consensus 98 ~i~~~~t~g~~~a~~~~~~~~~~~------------~~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d 162 (412)
T 1yaa_A 98 RVISVQSLSGTGALHISAKFFSKF------------FPDKLVYLSKPTWANHMAIFENQGL---KTATYPYWANETKSLD 162 (412)
T ss_dssp CEEEEEEEHHHHHHHHHHHHHHHH------------CTTCCEEEEESCCTTHHHHHHTTTC---CEEEEECEETTTTEEC
T ss_pred eEEEEeccchHhHHHHHHHHHHHh------------CCCCEEEEeCCCCccHHHHHHHcCc---eEEEEeeecCCCCccC
Confidence 4677 999999988775433321 1456688888999999999998888 7888887 43 67899
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccc---cchhh-hhcCC
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFS---EKYSF-VLKGI 152 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~---~~~~~-~~~~~ 152 (448)
+++|++++++. ...+.++++++++|+||.+.+ +++|+++|++||+++++|++|+...... +.... .+...
T Consensus 163 ~~~l~~~l~~~---~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 239 (412)
T 1yaa_A 163 LNGFLNAIQKA---PEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEK 239 (412)
T ss_dssp HHHHHHHHHHS---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhc
Confidence 99999999752 112456666999999998865 6678999999999999999986543211 10000 11111
Q ss_pred CC---ccEEEECCccccCCCCc--eEEEE
Q psy14299 153 NR---ANSVSWNPHKMLGAPLQ--CSILL 176 (448)
Q Consensus 153 ~~---aD~~~~s~hK~l~~P~g--~G~l~ 176 (448)
.. -++++.+++|.++ |.| +|+++
T Consensus 240 ~~~~~~~i~~~s~sK~~~-~~GlriG~~~ 267 (412)
T 1yaa_A 240 LSTVSPVFVCQSFAKNAG-MYGERVGCFH 267 (412)
T ss_dssp TTTTCCEEEEEECTTTSC-CGGGCEEEEE
T ss_pred CCCCcceEEEeccCCCCC-CcCCcceEEE
Confidence 11 2477889999887 656 58776
No 196
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.71 E-value=7e-17 Score=164.60 Aligned_cols=156 Identities=13% Similarity=-0.005 Sum_probs=116.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec--CCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT--NERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~--~~~g~id~e 81 (448)
..++|+|||+++..++.....- .+++.|+++...|.++...++..|. +++.+|. ++++.+|++
T Consensus 119 ~i~~t~G~t~al~~~~~~~~~~------------~~gd~Vlv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~ 183 (420)
T 4f4e_A 119 VTAQALGGTGALKIGADFLRTL------------NPKAKVAISDPSWENHRALFDMAGF---EVVAYPYYDAKTNGVNFD 183 (420)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHH------------CTTCCEEEEESCCHHHHHHHHHTTC---CEEEEECEETTTTEECHH
T ss_pred EEEECCccHHHHHHHHHHHHHh------------CCCCEEEEeCCCcHhHHHHHHHcCC---eEEEeeeeccccCccCHH
Confidence 5799999999998885432211 1566788999999999999999998 7889988 457899999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEeccccccccccc--chhh-hhcCCCCc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFSE--KYSF-VLKGINRA 155 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~~--~~~~-~~~~~~~a 155 (448)
+|++.+++. ..+++++++++++|+||.+.+ +++|+++|++||+++++|++|+......+ .... ...+....
T Consensus 184 ~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 260 (420)
T 4f4e_A 184 GMLAALNGY---EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLN 260 (420)
T ss_dssp HHHHHHTTC---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCC
T ss_pred HHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCC
Confidence 999999642 235789999999999998844 77899999999999999999876554211 1110 11112234
Q ss_pred cEEEECCccccCCC-CceEEEEE
Q psy14299 156 NSVSWNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 156 D~~~~s~hK~l~~P-~g~G~l~v 177 (448)
++++.|++|.++.| ..+|++++
T Consensus 261 ~i~~~S~SK~~~~~G~RiG~~~~ 283 (420)
T 4f4e_A 261 VFVSSSFSKSFSLYGERVGALSI 283 (420)
T ss_dssp EEEEEECTTTTTCGGGCEEEEEE
T ss_pred EEEEEeCCccCcCcCCCcEEEEE
Confidence 67888999998743 23777764
No 197
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.71 E-value=6.1e-15 Score=151.53 Aligned_cols=170 Identities=12% Similarity=0.100 Sum_probs=105.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
.++||+|||+++..++.+++... +.+|-+ ..+.+|+.+...|.+...++...|.. ...+..++.+.
T Consensus 112 ~v~~~~ggsea~~~al~~~~~~~----~~~g~~-~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~ 186 (449)
T 3a8u_X 112 HVFFTDSGSECALTAVKMVRAYW----RLKGQA-TKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTL 186 (449)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH----HHTTCT-TCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCC
T ss_pred EEEEcCcHHHHHHHHHHHHHHHH----HhcCCC-CCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCc
Confidence 47899999999999988776421 111211 02334555677777766666655420 01245555432
Q ss_pred CC-----CcC--------HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccc-
Q psy14299 75 RG-----QMI--------CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWG- 136 (448)
Q Consensus 75 ~g-----~id--------~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~- 136 (448)
.. .+| +++|+++|++.. ..++++|+++...+++|.+.| +++|.++|++||+++++|++|.
T Consensus 187 ~~~~~~~~~d~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~ 264 (449)
T 3a8u_X 187 LASNAYSRGMPKEGGIALADELLKLIELHD--ASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITG 264 (449)
T ss_dssp CGGGTTCSSSCSSSHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred cccCccccCChHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccC
Confidence 21 246 999999997521 124677777777677999888 9999999999999999999995
Q ss_pred cccccccchhhhhcCCCCccEEEECCccccCCC-CceEEEEEeccchhhh
Q psy14299 137 GSLIFSEKYSFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKEKGLLHQ 185 (448)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~~~~~~ 185 (448)
.+... ........++ ..|++++ .|++++- ..+|++++++ ++...
T Consensus 265 ~g~~g-~~~~~~~~~~-~~di~s~--sK~l~~G~~~~G~~~~~~-~~~~~ 309 (449)
T 3a8u_X 265 FGRTG-SMFGADSFGV-TPDLMCI--AKQVTNGAIPMGAVIAST-EIYQT 309 (449)
T ss_dssp TTTTS-SSSHHHHHTC-CCSEEEE--CGGGGTTSSCCEEEEEEH-HHHHH
T ss_pred ccccC-cchhhhhcCC-CCCEEEE--cccccCCCCceEEEEECH-HHHHH
Confidence 43221 1111111122 2577755 5998751 2288888765 44333
No 198
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.70 E-value=6.7e-17 Score=162.77 Aligned_cols=156 Identities=17% Similarity=0.102 Sum_probs=113.6
Q ss_pred cEEE--eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC--CCCCcC
Q psy14299 4 KPFL--LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN--ERGQMI 79 (448)
Q Consensus 4 ~g~~--t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~--~~g~id 79 (448)
..++ |+|||+|+..++..++.. .+++.|+++..+|.++...++..|. +++.+|.+ +++.+|
T Consensus 91 ~v~~~~~~g~~~a~~~~~~~~~~~------------~~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d 155 (394)
T 2ay1_A 91 TTATLATVGGTGALRQALELARMA------------NPDLRVFVSDPTWPNHVSIMNFMGL---PVQTYRYFDAETRGVD 155 (394)
T ss_dssp GEEEEEEEHHHHHHHHHHHHHHHH------------CTTCCEEEEESCCHHHHHHHHHHTC---CEEEEECEETTTTEEC
T ss_pred cEEEEecCCchhHHHHHHHHHHhc------------CCCCEEEEcCCCChhHHHHHHHcCC---ceEEEecccccCCccC
Confidence 3567 999999999888776542 1455688888999999999999998 78888875 567899
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccc--cchhhh-hcCCC
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFS--EKYSFV-LKGIN 153 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~--~~~~~~-~~~~~ 153 (448)
+++|++++++. ..+++++++++++|+||.+.| +++|.++|++||+++++|++|+...... +..... +....
T Consensus 156 ~~~l~~~l~~~---~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 232 (394)
T 2ay1_A 156 FEGMKADLAAA---KKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRI 232 (394)
T ss_dssp HHHHHHHHHTC---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcC
Confidence 99999999752 123577888999999998875 5678999999999999999998654311 000000 11111
Q ss_pred CccEEEECCccccCCC-CceEEEEE
Q psy14299 154 RANSVSWNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 154 ~aD~~~~s~hK~l~~P-~g~G~l~v 177 (448)
.-.+++.+++|+++.| ..+|++++
T Consensus 233 ~~~i~~~s~sK~~~~~G~riG~~~~ 257 (394)
T 2ay1_A 233 PEVLIAASCSKNFGIYRERTGCLLA 257 (394)
T ss_dssp SSEEEEEECTTTTTCGGGCEEEEEE
T ss_pred CCEEEEEeccCCCcCcCCccceEEE
Confidence 1235677899998743 22588877
No 199
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.69 E-value=6.9e-15 Score=152.01 Aligned_cols=166 Identities=14% Similarity=0.083 Sum_probs=103.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhC-CC---------CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLG-IG---------MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g-~~---------~~~v~~v~~~ 73 (448)
.++||+|||+||..|+.+++... ...|.+ ..+.+|..+...|.+...+....+ .. ...+..++.+
T Consensus 137 ~v~~~~sGseA~~~Alk~a~~~~----~~~g~~-g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 211 (457)
T 3tfu_A 137 TVFFSDSGSVSVEVAAKMALQYW----RGRGLP-GKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQV 211 (457)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH----HHTTCT-TCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCC
T ss_pred EEEEeCcHHHHHHHHHHHHHHHH----HhcCCC-CCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCC
Confidence 47999999999999998887631 111211 133455556666665544443311 00 0023334432
Q ss_pred C--CCCcCHHHHHHHHHHhhhcCCCcEEEEEec-cCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccchh
Q psy14299 74 E--RGQMICSFLEQTIQTSLAEKKIPLFVNATA-GTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYS 146 (448)
Q Consensus 74 ~--~g~id~e~Le~~l~~~~~~~~~~~lVv~~~-~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~ 146 (448)
. ....|+++|+++|++. +.++.+|++.. +.+++|.+.| +++|.++|++||+++++|+++.+.......+.
T Consensus 212 ~~~~~~~d~~~le~~l~~~---~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a 288 (457)
T 3tfu_A 212 PRDYDPAYSAAFEAQLAQH---AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFA 288 (457)
T ss_dssp CSSCCHHHHHHHHHHHHHH---GGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSST
T ss_pred CcccCHHHHHHHHHHHHhC---CCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhH
Confidence 2 2235899999999752 12467888888 7888998876 99999999999999999999874321111111
Q ss_pred hhhcCCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 147 FVLKGINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 147 ~~~~~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
....++ ..|++++ .|.+++.. ..|+++.+++
T Consensus 289 ~~~~~~-~pdiit~--sK~l~gG~~~lG~v~~~~~ 320 (457)
T 3tfu_A 289 ADHAGV-SPDIMCV--GKALTGGYLSLAATLCTAD 320 (457)
T ss_dssp HHHHTC-CCSEEEE--CGGGGTTSSCCEEEEEEHH
T ss_pred hHhcCC-CceEEEE--ChhhhCCCcceEEEEEcHH
Confidence 111122 3677755 59888753 6788877664
No 200
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.69 E-value=1.7e-15 Score=156.11 Aligned_cols=166 Identities=10% Similarity=0.038 Sum_probs=98.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecC-CCchHHHHHHHH--------hCCCC--CcEEEEec
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSE-DSHYSMLKAAHW--------LGIGM--DNVIRVKT 72 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~-~~H~s~~~~~~~--------~g~~~--~~v~~v~~ 72 (448)
.++||+|||+||..++..++..........|.+..+++.|++.+ ..|.+...+... .+... ..+..+|.
T Consensus 121 ~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (449)
T 2cjg_A 121 HLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPY 200 (449)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCC
T ss_pred EEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcC
Confidence 58999999999999998776321000000111111144455554 555443322221 12210 13566666
Q ss_pred CC--CC--------CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccc
Q psy14299 73 NE--RG--------QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGS 138 (448)
Q Consensus 73 ~~--~g--------~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~ 138 (448)
++ .. ..++++|++++++. +.++++|+++..++++|.+.+ +++|.++|++||+++++|++|++.
T Consensus 201 ~d~~~~~~~~~~~~~~~~~~le~~i~~~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~ 277 (449)
T 2cjg_A 201 MRPGLDEPAMAALEAEALRQARAAFETR---PHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGC 277 (449)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHS---TTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred CCchhhccccchhhHHHHHHHHHHHHhc---CCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCC
Confidence 54 11 25677798888641 235788888887788998777 999999999999999999999842
Q ss_pred cccccchhhhhcCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 139 LIFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 139 ~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
......+.....++ ..|+++++ |++ | +|++++++
T Consensus 278 g~~g~~~~~~~~~~-~~di~t~s--K~l--~--iG~~~~~~ 311 (449)
T 2cjg_A 278 GLTGTAWAYQQLDV-APDIVAFG--KKT--Q--VCGVMAGR 311 (449)
T ss_dssp TTTSSSSTHHHHTC-CCSEEEEC--GGG--S--SEEEEECG
T ss_pred CccCcceeecccCC-CceEEEec--Ccc--c--EEEEEECH
Confidence 11111111111123 35877664 988 5 67877765
No 201
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.69 E-value=3.1e-14 Score=146.98 Aligned_cols=167 Identities=17% Similarity=0.141 Sum_probs=105.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
.++||+|||+||..++.+++... ...|.+ ..+.+|......|.+...+....+.. ...+..++...
T Consensus 114 ~v~~~~gGseA~~~al~~~~~~~----~~~g~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 188 (460)
T 3gju_A 114 RVYFGLSGSDANETNIKLIWYYN----NVLGRP-EKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPY 188 (460)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH----HHTTCT-TCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCC
T ss_pred EEEEeCchHHHHHHHHHHHHHHH----HhcCCC-CCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCc
Confidence 47899999999999999887631 111211 13445555667776666555543321 11355566432
Q ss_pred -----CCCcC--------HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccc
Q psy14299 75 -----RGQMI--------CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGG 137 (448)
Q Consensus 75 -----~g~id--------~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~ 137 (448)
+..++ +++|++++++. ...++.+|+++.+.+++|.+.+ +++|.++|++||+++++|++|.+
T Consensus 189 ~~~~~~~g~~~~~~~~~~~~~le~~i~~~--~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g 266 (460)
T 3gju_A 189 YFRRTDRSMSEEQFSQHCADKLEEMILAE--GPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTG 266 (460)
T ss_dssp GGGCSCTTCCHHHHHHHHHHHHHHHHHHH--CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred cccCCccccChhHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 11223 68899888742 1124678888888887888766 99999999999999999999884
Q ss_pred ccccccchhhhhcCCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 138 SLIFSEKYSFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 138 ~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
.......+.....++ ..|+++++ |.+++. ..+|+++.+++
T Consensus 267 ~gr~g~~~~~~~~~~-~pdi~t~s--K~l~gG~~~lg~v~~~~~ 307 (460)
T 3gju_A 267 FGRLGTMFGSDHYGI-KPDLITIA--KGLTSAYAPLSGVIVADR 307 (460)
T ss_dssp TTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSSCCEEEEEEHH
T ss_pred CCcccccchHhhcCC-CCCeeeee--hhhcCCCCCeEEEEECHH
Confidence 321111111111233 35777764 998875 36788777654
No 202
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.68 E-value=8.2e-16 Score=158.36 Aligned_cols=154 Identities=11% Similarity=0.036 Sum_probs=110.4
Q ss_pred cEEE--eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH----HhCCCCCcEEEEec-CCC-
Q psy14299 4 KPFL--LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH----WLGIGMDNVIRVKT-NER- 75 (448)
Q Consensus 4 ~g~~--t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~----~~g~~~~~v~~v~~-~~~- 75 (448)
..++ |+|||+|+.+++...... .+++.|+++...|.++...++ ..|. +++.+|. +++
T Consensus 119 ~i~~~~t~ggt~al~l~~~~~~~~------------~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~---~v~~~~~~~~~~ 183 (448)
T 3meb_A 119 RIASCQSLSGTGSLHIGFEFLHLW------------MPKAEFYMPSTTWPNHYGIYDKVFNKLKV---PYKEYTYLRKDG 183 (448)
T ss_dssp CEEEEEESHHHHHHHHHHHHHHHH------------CTTCCEEEESSCCTHHHHHHHHHHCTTTS---CCEEECCBCTTS
T ss_pred cEEEEECCcHHHHHHHHHHHHHHh------------CCCCEEEECCCCCHhHHHHHHhhHHhCCC---eEEEEecccccc
Confidence 4677 999999987654322211 156679999999999999998 7887 7888888 654
Q ss_pred -CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccc---cchhhh
Q psy14299 76 -GQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFS---EKYSFV 148 (448)
Q Consensus 76 -g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~---~~~~~~ 148 (448)
+.+|+++|++++++. ..+++++++.+++|+||...+ +++|+++|++||+++++|++|....... +.....
T Consensus 184 ~~~~d~e~l~~~l~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 260 (448)
T 3meb_A 184 ELEIDFSNTKKDIQSA---PEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVR 260 (448)
T ss_dssp CSSBCHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHH
T ss_pred CCCcCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHH
Confidence 799999999999752 224678888999999998876 5559999999999999999987654321 111110
Q ss_pred -hcCCCCccEEEECCccccCCCC-ceEEE
Q psy14299 149 -LKGINRANSVSWNPHKMLGAPL-QCSIL 175 (448)
Q Consensus 149 -~~~~~~aD~~~~s~hK~l~~P~-g~G~l 175 (448)
+.....-.+++.|++|.++.|. .+|++
T Consensus 261 ~~~~~~~~~i~~~S~SK~~g~~G~RiG~l 289 (448)
T 3meb_A 261 MFVDAGVEVLVAQSFSKNFGLYGERIGCL 289 (448)
T ss_dssp HHHHTTCCEEEEEECTTTSCCGGGCCEEE
T ss_pred HHhhcCCcEEEEecccccCCCccccceee
Confidence 1011112366789999987542 26665
No 203
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.68 E-value=2.5e-14 Score=147.14 Aligned_cols=166 Identities=13% Similarity=0.076 Sum_probs=93.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
.++||+|||+||..|+.+++.... ..|.+ ..+.+|+.+...|.+...+....+.. ...+..+|.+.
T Consensus 106 ~v~~~~sGseA~~~al~~~~~~~~----~~G~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (448)
T 3dod_A 106 RVFYSDSGAEAMEIALKMAFQYWK----NIGKP-EKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPY 180 (448)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHH----HTTCT-TCCEEEEEC-----------------------------CEEECCCC
T ss_pred EEEEeCchHHHHHHHHHHHHHHHH----hhCCC-CCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCc
Confidence 579999999999999998886310 01111 02334444455555544443333321 01244555544
Q ss_pred CCCc-----------CHHHHHHHHHHhhhcCCCcEEEEEeccC-CccccccC----HHHHHHHHHHcCCEEEEecccccc
Q psy14299 75 RGQM-----------ICSFLEQTIQTSLAEKKIPLFVNATAGT-TVLGAFDP----LDEIATVCEKYDLWMHVDACWGGS 138 (448)
Q Consensus 75 ~g~i-----------d~e~Le~~l~~~~~~~~~~~lVv~~~~~-t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~ 138 (448)
..+. |+++|+++|+.. ..++.+|++.... +++|.+.| +++|.++|++||+++++|++|.+.
T Consensus 181 ~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~ 257 (448)
T 3dod_A 181 VYRSESGDPDECRDQCLRELAQLLEEH---HEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGF 257 (448)
T ss_dssp CTTSSSCCHHHHHHHHHHHHHHHHHHH---GGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred cccCCccchhhhhHHHHHHHHHHHHhC---CCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCC
Confidence 3332 489999999732 1245677777776 77887766 999999999999999999998742
Q ss_pred cccccchhhhhcCCCCccEEEECCccccCCCC-ceEEEEEecc
Q psy14299 139 LIFSEKYSFVLKGINRANSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 139 ~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
......+.....++ ..|+++++ |.+++.. .+|+++.+++
T Consensus 258 g~~g~~~a~~~~~~-~~di~t~s--K~l~~G~~~ig~v~~~~~ 297 (448)
T 3dod_A 258 GRTGKMFACEHENV-QPDLMAAG--KGITGGYLPIAVTFATED 297 (448)
T ss_dssp TTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSSCCEEEEEEHH
T ss_pred CcccchhhhhhcCC-CCCEEEec--ccccCCcCceEEEEECHH
Confidence 21111111111222 25777764 9987653 6788777654
No 204
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.68 E-value=4.7e-15 Score=151.44 Aligned_cols=160 Identities=14% Similarity=0.061 Sum_probs=102.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC--------CCCcEEEEecCCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI--------GMDNVIRVKTNER 75 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~--------~~~~v~~v~~~~~ 75 (448)
.++||+|||++|..++..++..- ..+.+|+.+...|.+...+....+. ....+..++.+..
T Consensus 104 ~v~~~~gg~ea~~~a~~~~~~~~-----------~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 172 (433)
T 1zod_A 104 RALLLSTGAESNEAAIRMAKLVT-----------GKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFT 172 (433)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHH-----------TCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCT
T ss_pred EEEEeCchHHHHHHHHHHHHHhh-----------CCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcc
Confidence 57899999999999998776420 1234555566677666555443221 0113555554321
Q ss_pred ------------CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccc
Q psy14299 76 ------------GQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSL 139 (448)
Q Consensus 76 ------------g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~ 139 (448)
+.+|+++|++++++. ...++++|+++...+++|.+.| +++|.++|++||+++++|++|+...
T Consensus 173 ~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g 250 (433)
T 1zod_A 173 YRPRFERNGAYDYLAELDYAFDLIDRQ--SSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVG 250 (433)
T ss_dssp TSCCCEETTEECHHHHHHHHHHHHHHH--CCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred cccccCCchhhhHHHHHHHHHHHHHhc--CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Confidence 135799999999752 1124667777666677897766 9999999999999999999998422
Q ss_pred ccccchhhhhcCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 140 IFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 140 ~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
...........++ ..|++++ .|+++++..+|++++++
T Consensus 251 ~~g~~~~~~~~~~-~~di~s~--sK~~~~G~~ig~~~~~~ 287 (433)
T 1zod_A 251 RTGTMFACQRDGV-TPDILTL--SKTLGAGLPLAAIVTSA 287 (433)
T ss_dssp TTSSSSTHHHHTC-CCSEEEE--CHHHHTTSSCEEEEECH
T ss_pred cCchHhHHhhcCC-CCCEEEe--cccccCCCCeeEEEEhH
Confidence 1111111111122 2576655 59888766789988865
No 205
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.67 E-value=4.7e-16 Score=156.50 Aligned_cols=154 Identities=10% Similarity=0.011 Sum_probs=114.0
Q ss_pred EEE--eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC--CCCCcCH
Q psy14299 5 PFL--LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN--ERGQMIC 80 (448)
Q Consensus 5 g~~--t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~--~~g~id~ 80 (448)
.++ |+|||+++..++..++.. .+++.|+++..+|.++...++..|. +++.+|.+ +++.+|+
T Consensus 95 v~~~~~~g~~~a~~~~~~~~~~~------------~~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~ 159 (396)
T 2q7w_A 95 ARTAQTPGGTGALRVAADFLAKN------------TSVKRVWVSNPSWPNHKSVFNSAGL---EVREYAYYDAENHTLDF 159 (396)
T ss_dssp EEEEEESHHHHHHHHHHHHHHHH------------SCCCEEEEEESCCTHHHHHHHHTTC---EEEEEECEETTTTEECH
T ss_pred EEEEecccchhhHHHHHHHHHHh------------CCCCEEEEcCCCchhHHHHHHHcCC---ceEEEecccCCCCCcCH
Confidence 556 999999998888765532 1566788899999999999999888 78888885 5788999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccc--cchhhh-hcCCCC
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFS--EKYSFV-LKGINR 154 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~--~~~~~~-~~~~~~ 154 (448)
++|++++++. ..+++++++++++|+||.+.| +++|.++|++||+++++|++|+...... +..... +.....
T Consensus 160 ~~l~~~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 236 (396)
T 2q7w_A 160 DALINSLNEA---QAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHK 236 (396)
T ss_dssp HHHHHHHTTC---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCS
T ss_pred HHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCC
Confidence 9999999642 124678888999999998865 6689999999999999999988654311 000100 111112
Q ss_pred ccEEEECCccccCCCCc--eEEEEE
Q psy14299 155 ANSVSWNPHKMLGAPLQ--CSILLI 177 (448)
Q Consensus 155 aD~~~~s~hK~l~~P~g--~G~l~v 177 (448)
.++++.+++|+++. .| +|++++
T Consensus 237 ~~i~~~s~sK~~~~-~G~riG~~~~ 260 (396)
T 2q7w_A 237 ELIVASSYSXNFGL-YNERVGACTL 260 (396)
T ss_dssp CEEEEEECTTTTTC-GGGCCEEEEE
T ss_pred cEEEEEeccccccc-cccccceEEE
Confidence 34778899998863 45 688876
No 206
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.67 E-value=5.7e-15 Score=150.10 Aligned_cols=143 Identities=14% Similarity=0.094 Sum_probs=108.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHH-----hCCCCCcEEEEecCCCCCc
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHW-----LGIGMDNVIRVKTNERGQM 78 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~-----~g~~~~~v~~v~~~~~g~i 78 (448)
.++++++|++|+..+ .... .+++.|+++...|.+....+.. .|+ +++.++.+
T Consensus 84 ~~~~~~sG~~Ai~~~-~~l~--------------~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~---~~~~v~~~----- 140 (400)
T 3nmy_A 84 RAFAFASGMAATSTV-MELL--------------DAGSHVVAMDDLYGGTFRLFERVRRRTAGL---DFSFVDLT----- 140 (400)
T ss_dssp EEEEESSHHHHHHHH-HTTS--------------CTTCEEEEESSCCHHHHHHHHHTHHHHHCC---EEEEECTT-----
T ss_pred CEEEecCHHHHHHHH-HHHc--------------CCCCEEEEeCCCchHHHHHHHHhhHhhcCe---EEEEECCC-----
Confidence 468889998887653 2211 2567788899999876655433 477 78888875
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
|+++|++++++ ++++|++..++|++|.+.|+++|.++|++||+++++|++|+.+....+. . . ++|++
T Consensus 141 d~~~l~~~i~~------~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~-~-----~-g~div 207 (400)
T 3nmy_A 141 DPAAFKAAIRA------DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPL-S-----L-GADLV 207 (400)
T ss_dssp SHHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGG-G-----G-TCSEE
T ss_pred CHHHHHHHhcc------CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh-h-----c-CCcEE
Confidence 89999999864 5889999999999999999999999999999999999999865442211 1 1 47999
Q ss_pred EECCccccCCCC-c-eE-EEEEeccch
Q psy14299 159 SWNPHKMLGAPL-Q-CS-ILLIKEKGL 182 (448)
Q Consensus 159 ~~s~hK~l~~P~-g-~G-~l~vr~~~~ 182 (448)
+.|++|++++|. . .| +++++++++
T Consensus 208 ~~S~sK~l~g~g~~~gG~~vv~~~~~~ 234 (400)
T 3nmy_A 208 VHSATKYLNGHSDMVGGIAVVGDNAEL 234 (400)
T ss_dssp EEETTTTTTCSSSCCCEEEEECSCHHH
T ss_pred EecCccccCCCCCcceeEEEEeCCHHH
Confidence 999999999883 2 34 344445443
No 207
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.67 E-value=5.1e-16 Score=156.78 Aligned_cols=156 Identities=10% Similarity=0.005 Sum_probs=115.5
Q ss_pred EEE--eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecC--CCCCcCH
Q psy14299 5 PFL--LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTN--ERGQMIC 80 (448)
Q Consensus 5 g~~--t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~--~~g~id~ 80 (448)
.++ |+|||+++.+++...+... .+++.|+++...|.++...++..|. +++.+|.+ .++.+|+
T Consensus 97 i~~v~t~G~~~al~~~~~~l~~~~-----------~~gd~Vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~ 162 (401)
T 7aat_A 97 YVTVQGISGTGSLRVGANFLQRFF-----------KFSRDVYLPKPSWGNHTPIFRDAGL---QLQAYRYYDPKTCSLDF 162 (401)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHHC-----------TTCCEEEEEESCCTTHHHHHHHTTC---EEEEEECEETTTTEECH
T ss_pred eEEEecCcchHHHHHHHHHHHHhc-----------cCCCEEEEcCCCchhHHHHHHHcCC---eeEeeeeeccccCccCH
Confidence 445 9999999998876655321 2567899999999999999999998 78888874 3689999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHcCCEEEEecccccccccc---cchhh-hhcCCC
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKYDLWMHVDACWGGSLIFS---EKYSF-VLKGIN 153 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~---~~~~~-~~~~~~ 153 (448)
+++++.+++. ..+++++++++++|+||.+ +++++|+++|++||+++++|.+|....... +.... ......
T Consensus 163 ~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 239 (401)
T 7aat_A 163 TGAMEDISKI---PEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQG 239 (401)
T ss_dssp HHHHHHHTTS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT
T ss_pred HHHHHHHHhC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcC
Confidence 9999988651 2357899999999999965 458889999999999999999987654321 11110 001112
Q ss_pred CccEEEECCccccCCCC-ceEEEEE
Q psy14299 154 RANSVSWNPHKMLGAPL-QCSILLI 177 (448)
Q Consensus 154 ~aD~~~~s~hK~l~~P~-g~G~l~v 177 (448)
.-.+++.+++|.++.|. .+|++++
T Consensus 240 ~~~i~~~S~sK~~~~~G~RiG~l~~ 264 (401)
T 7aat_A 240 IDVVLSQSYAKNMGLYGERAGAFTV 264 (401)
T ss_dssp CCCEEEEECTTTSCCGGGCEEEEEE
T ss_pred CcEEEEecCCcccccccCceEEEEE
Confidence 23578899999987442 2677775
No 208
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.66 E-value=3.9e-14 Score=146.20 Aligned_cols=166 Identities=18% Similarity=0.161 Sum_probs=103.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC---------CcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM---------DNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~---------~~v~~v~~~~ 74 (448)
.++||+|||++|..++.+++... ...|.+ ..+.+|......|.....+....+... ..+..++.+.
T Consensus 113 ~v~~~~ggseA~~~al~~~~~~~----~~~g~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 187 (459)
T 4a6r_A 113 RVFYTNSGSESVDTMIRMVRRYW----DVQGKP-EKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPW 187 (459)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH----HHTTCT-TCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCC
T ss_pred EEEEeCchHHHHHHHHHHHHHHH----HhcCCC-CCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCc
Confidence 57999999999999999888631 111211 123445556666655554444433211 1244455322
Q ss_pred -----CCCcC--------HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccc
Q psy14299 75 -----RGQMI--------CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGG 137 (448)
Q Consensus 75 -----~g~id--------~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~ 137 (448)
+. +| +++|++++.+.. ..++.+|+++...+++|.+.| +++|.++|++||+++++|++|.+
T Consensus 188 ~~~~~~~-~d~~~~~~~~~~~le~~i~~~~--~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g 264 (459)
T 4a6r_A 188 WYKHGKD-MTPDEFGVVAARWLEEKILEIG--ADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICG 264 (459)
T ss_dssp HHHHCTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred cccCCcc-cCHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 11 45 788998886421 124667777777777888887 99999999999999999999874
Q ss_pred ccccccchhhhhcCCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 138 SLIFSEKYSFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 138 ~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
.......+.....++ ..|+++++ |.+++. ..+|+++.+++
T Consensus 265 ~gr~G~~~~~~~~~~-~pdi~t~s--K~l~gg~~~lg~v~~~~~ 305 (459)
T 4a6r_A 265 FGRTGEWFGHQHFGF-QPDLFTAA--KGLSSGYLPIGAVFVGKR 305 (459)
T ss_dssp TTTTSSSSHHHHHTC-CCSEEEEC--GGGGTTSSCCEEEEECHH
T ss_pred CCcccccchHhhcCC-CCCeeehh--hhhcCCCCCccceeeCHH
Confidence 311111111111223 35788765 988765 46788777543
No 209
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.66 E-value=4.6e-15 Score=151.68 Aligned_cols=153 Identities=17% Similarity=0.072 Sum_probs=98.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC----------------CcE
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM----------------DNV 67 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~----------------~~v 67 (448)
.++||+|||++|..++..++..- ..+.+|+.+...|.+...+....|.+. ..+
T Consensus 113 ~v~~~~sGsea~~~ai~~a~~~~-----------~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 181 (434)
T 3l44_A 113 KVRFVNSGTEAVMTTIRVARAYT-----------GRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEV 181 (434)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH-----------CCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTE
T ss_pred EEEEeCchHHHHHHHHHHHHHhh-----------CCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCce
Confidence 57999999999999999887631 123444445555544332222112100 023
Q ss_pred EEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccccccc
Q psy14299 68 IRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSE 143 (448)
Q Consensus 68 ~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~ 143 (448)
..+|.+ |+++|++++++.. .++.+|+++..++++|.+.| +++|.++|++||+++|+|++|.+. ....
T Consensus 182 ~~~~~~-----d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~ 252 (434)
T 3l44_A 182 ITVPFN-----NVETLKEALDKWG---HEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMY 252 (434)
T ss_dssp EEECTT-----CHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSS
T ss_pred EecCcc-----cHHHHHHHHHhCC---CCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccc
Confidence 344433 8999999997531 24667888877777888888 999999999999999999999854 2111
Q ss_pred chhhhhcCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 144 KYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 144 ~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
.......++ ..|++++ .|.++++..+|.++.++
T Consensus 253 ~~~~~~~~~-~~di~t~--sK~~~~G~~iG~~~~~~ 285 (434)
T 3l44_A 253 GGAQDLLGV-TPDLTAL--GKVIGGGLPIGAYGGKK 285 (434)
T ss_dssp SCHHHHHTC-CCSEEEE--EGGGGTTSSCEEEEECH
T ss_pred cHHHHHcCC-CCCeeeh--hhhhcCCcCeeeEEEcH
Confidence 111111222 2576655 59888777889886644
No 210
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.66 E-value=5.6e-14 Score=145.77 Aligned_cols=167 Identities=19% Similarity=0.181 Sum_probs=106.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC--------CCcEEEEecCCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG--------MDNVIRVKTNER 75 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~--------~~~v~~v~~~~~ 75 (448)
.++|++|||+||..|+.+++... ...|.+ ..+.+|......|.+...+....+.. ...+..++.+..
T Consensus 118 ~v~~~~sGseA~~~aik~a~~~~----~~~g~~-~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~ 192 (472)
T 3hmu_A 118 HVFFAGGGSEANDTNIRMVRTYW----QNKGQP-EKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNW 192 (472)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH----HHTTCT-TCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCH
T ss_pred EEEEeCCHHHHHHHHHHHHHHHH----HhcCCC-CCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCcc
Confidence 47999999999999999988631 111211 13445666677776655554443321 113555654321
Q ss_pred CC----cC--------HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccc
Q psy14299 76 GQ----MI--------CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSL 139 (448)
Q Consensus 76 g~----id--------~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~ 139 (448)
.+ .| +++|++++++.. ..++.+|++..+.+++|.+.| +++|.++|++||+++++|++|.+..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfg 270 (472)
T 3hmu_A 193 WAEGGDMDPEEFGLARARELEEAILELG--ENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFG 270 (472)
T ss_dssp HHHCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred ccCCcccCHHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCc
Confidence 11 34 788888886421 124677888888888888887 9999999999999999999987532
Q ss_pred ccccchhhhhcCCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 140 IFSEKYSFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 140 ~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
.....+.....++ ..|+++++ |.+++. ..+|+++.+++
T Consensus 271 r~G~~~a~~~~~v-~pdi~t~s--K~l~gg~~plG~v~~~~~ 309 (472)
T 3hmu_A 271 RTGNWFGTQTMGI-RPHIMTIA--KGLSSGYAPIGGSIVCDE 309 (472)
T ss_dssp TTSSSCHHHHHTC-CCSEEEEC--GGGTTTSSCCEEEEEEHH
T ss_pred ccCccchhHHhCC-CCceeeec--hhhhcCCcceEEEEECHH
Confidence 1111111111233 36888765 998875 36788777554
No 211
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.65 E-value=4.9e-15 Score=151.42 Aligned_cols=153 Identities=16% Similarity=0.053 Sum_probs=100.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCC----------------cE
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMD----------------NV 67 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~----------------~v 67 (448)
.++||+|||++|..++..++..- ..+.+|+.+...|.+...+....|.+.. .+
T Consensus 111 ~v~~~~~Gsea~~~ai~~a~~~~-----------~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 179 (429)
T 3k28_A 111 IVRMVNSGTEATMSALRLARGYT-----------GRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNT 179 (429)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH-----------TCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTE
T ss_pred EEEEeCChHHHHHHHHHHHHHhh-----------CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCce
Confidence 57999999999999998887631 1334555566666554433322222100 23
Q ss_pred EEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccccccc
Q psy14299 68 IRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSE 143 (448)
Q Consensus 68 ~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~ 143 (448)
..+|.+ |+++|++++++.. .++.+|++....+++|.+.| +++|.++|++||+++|+|++|.+. ....
T Consensus 180 ~~~~~~-----d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~ 250 (429)
T 3k28_A 180 ITVAYN-----DLESVKYAFEQFG---DDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAY 250 (429)
T ss_dssp EEEETT-----CHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSST
T ss_pred eecCCC-----CHHHHHHHHHhCC---CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCc
Confidence 333433 8999999997531 24677888888878888888 999999999999999999999743 2111
Q ss_pred chhhhhcCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 144 KYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 144 ~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
.......++ ..|.+++ .|.+++...+|+++.++
T Consensus 251 ~~~~~~~~~-~~di~t~--sK~~~~G~~iG~~~~~~ 283 (429)
T 3k28_A 251 NCGQGYYGV-TPDLTCL--GKVIGGGLPVGAYGGKA 283 (429)
T ss_dssp THHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECH
T ss_pred chHHHHhCC-CCceehh--hhhhcCCCCeEEEEEcH
Confidence 111111222 2577765 59888767788887754
No 212
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.65 E-value=4.2e-14 Score=146.71 Aligned_cols=134 Identities=10% Similarity=-0.106 Sum_probs=86.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcC------Cc--------ccccCCCCC-CCeEEEecCCCchHHHHHHHHhCCCC----
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLD------PD--------TKRKGLSHL-PPLCMFTSEDSHYSMLKAAHWLGIGM---- 64 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~------~~--------~~~~G~~~~-~~~~Vl~~~~~H~s~~~~~~~~g~~~---- 64 (448)
.++|++|||+||..|+.+++.... ++ ....+-++. .+.+|......|-+...+....|...
T Consensus 129 ~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~ 208 (472)
T 1ohv_A 129 QLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKI 208 (472)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHT
T ss_pred EEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCcccccc
Confidence 479999999999999998864310 00 000000111 23456666677777666665554310
Q ss_pred ----CcEEEEecCCC-C-------------CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHH
Q psy14299 65 ----DNVIRVKTNER-G-------------QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVC 122 (448)
Q Consensus 65 ----~~v~~v~~~~~-g-------------~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia 122 (448)
..+..++.+.. . ..|+++|+++|++....+.++++|++....+++|.+.| +++|.++|
T Consensus 209 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~ 288 (472)
T 1ohv_A 209 DIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIS 288 (472)
T ss_dssp TSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHH
T ss_pred CCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHH
Confidence 00112232110 0 23688999999763221225788888888888999888 99999999
Q ss_pred HHcCCEEEEeccccc
Q psy14299 123 EKYDLWMHVDACWGG 137 (448)
Q Consensus 123 ~~~g~~l~VD~A~~~ 137 (448)
++||+++|+|++|.+
T Consensus 289 ~~~g~lli~DEv~~g 303 (472)
T 1ohv_A 289 RKHGCAFLVDEVQTG 303 (472)
T ss_dssp HHTTCEEEEECTTTT
T ss_pred HHhCCEEEEeCcccC
Confidence 999999999999974
No 213
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.65 E-value=3e-15 Score=152.50 Aligned_cols=149 Identities=11% Similarity=0.103 Sum_probs=116.1
Q ss_pred eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecC-CCchHHHHHH----------HHhCCCCCcEEEEecCCCC
Q psy14299 8 LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSE-DSHYSMLKAA----------HWLGIGMDNVIRVKTNERG 76 (448)
Q Consensus 8 t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~-~~H~s~~~~~----------~~~g~~~~~v~~v~~~~~g 76 (448)
++|||+||..++.+..+ +++.|+++. ..|......+ +..|+ +++.++.++++
T Consensus 83 ~~sGt~Ai~~al~all~--------------~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~---~~~~v~~~~~g 145 (409)
T 3jzl_A 83 IISGTHAISTVLFGILR--------------PDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHI---GYSSVPLLENG 145 (409)
T ss_dssp SCSHHHHHHHHHHHHCC--------------TTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTC---EEEECCCCTTS
T ss_pred CccHHHHHHHHHHHhcC--------------CCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCC---EEEEeCCCCCC
Confidence 78999999888776543 677888887 7787776543 34466 78899998899
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEec----cCCccccccCHHHHHHHHHH--cCCEEEEecccccccccccchhhhhc
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATA----GTTVLGAFDPLDEIATVCEK--YDLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~----~~t~tG~~~~l~~I~~ia~~--~g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
.+|+++|++++++ ++++|++.+ ++|++|.+.|+++|+++||+ ||++++||++|+.+....+...
T Consensus 146 ~~d~e~l~~ai~~------~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~---- 215 (409)
T 3jzl_A 146 DVDFPRIAKKMTP------KTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPE---- 215 (409)
T ss_dssp CCCHHHHHHHCCT------TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGG----
T ss_pred CcCHHHHHHhccC------CCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccccCCccc----
Confidence 9999999999854 588999999 99999999999999999999 9999999999987653222111
Q ss_pred CCCCccEEEECCccccCCCCc--eEEEEEeccchhhhh
Q psy14299 151 GINRANSVSWNPHKMLGAPLQ--CSILLIKEKGLLHQA 186 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~P~g--~G~l~vr~~~~~~~~ 186 (448)
..+|+++.|+||+++++.. .|+++. ++++....
T Consensus 216 --~g~Div~~S~sK~lgg~~~~~GG~v~~-~~~li~~l 250 (409)
T 3jzl_A 216 --VGADIIAGSLIKNPGGGLAKTGGYIAG-KEALVDLC 250 (409)
T ss_dssp --GTCSEEEEETTSGGGTTTCSSCEEEEE-CHHHHHHH
T ss_pred --cCCeEEEECccccCCccCCceEEEEEe-CHHHHHHH
Confidence 1479999999999987642 366555 45554443
No 214
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.64 E-value=9.3e-14 Score=143.14 Aligned_cols=162 Identities=14% Similarity=0.067 Sum_probs=98.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC----------CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG----------MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~----------~~~v~~v~~~ 73 (448)
.++||+|||+||..|+..++..- ..+.+|......|-....+....+.. ...+..+|.+
T Consensus 124 ~v~~~~sGseA~~~Alk~a~~~~-----------g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (451)
T 3oks_A 124 RSALFNSGSEAVENAVKIARSHT-----------HKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLS 192 (451)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH-----------CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCC
T ss_pred EEEEeCcHHHHHHHHHHHHHHhc-----------CCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCC
Confidence 58999999999999998888631 13445555666665555554443321 0135666654
Q ss_pred CCC-------------CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccc
Q psy14299 74 ERG-------------QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWG 136 (448)
Q Consensus 74 ~~g-------------~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~ 136 (448)
... .-+++.+++.|++... ...+.+|++....++.|.+.| +++|.++|++||+++++|++|.
T Consensus 193 ~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~-~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~ 271 (451)
T 3oks_A 193 YPFRDAEFGKELATDGELAAKRAITVIDKQIG-ADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQT 271 (451)
T ss_dssp CHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTC-GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT
T ss_pred ccccccccccccchhhHHHHHHHHHHHHhhcC-CCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 211 1234555555553211 124556666666666677766 9999999999999999999987
Q ss_pred cccccccchhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 137 GSLIFSEKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
+.......+.....++ ..|++++ .|.+++...+|+++.+++
T Consensus 272 g~g~~g~~~~~~~~~~-~pdi~t~--sK~l~~G~~iG~v~~~~~ 312 (451)
T 3oks_A 272 GFARTGAMFACEHEGI-DPDLIVT--AKGIAGGLPLSAVTGRAE 312 (451)
T ss_dssp TTTTTSSSSGGGGGTC-CCSEEEE--CGGGGTTSSCEEEEEEHH
T ss_pred CCCccccchhhhhcCC-CCCeeee--hhhhhCCcceEEEEECHH
Confidence 4321111111111122 3577765 499877666788777553
No 215
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.64 E-value=1.1e-13 Score=142.77 Aligned_cols=163 Identities=12% Similarity=0.037 Sum_probs=95.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC----------CCcEEEEecC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG----------MDNVIRVKTN 73 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~----------~~~v~~v~~~ 73 (448)
.++||+|||+||..|+..++..- ..+.+|......|.....+....+.. ...+..+|.+
T Consensus 127 ~v~~~~sGseA~~~alk~a~~~~-----------g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (453)
T 4ffc_A 127 RTALFNSGAEAVENAIKVARLAT-----------GRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPAS 195 (453)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH-----------CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCC
T ss_pred EEEEeCcHHHHHHHHHHHHHHhc-----------CCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCC
Confidence 58999999999999998887531 13445666667776665555543321 0135566654
Q ss_pred C----CCCcC-HHHHHHHHHHhhh--cCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccc
Q psy14299 74 E----RGQMI-CSFLEQTIQTSLA--EKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFS 142 (448)
Q Consensus 74 ~----~g~id-~e~Le~~l~~~~~--~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~ 142 (448)
. ...++ .+.++..++...+ ....+.+|++.....+.|.+.| +++|.++|++||+++++|++|.+.....
T Consensus 196 ~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g 275 (453)
T 4ffc_A 196 YPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTG 275 (453)
T ss_dssp CTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred ccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCccc
Confidence 2 11222 2333322221111 1123455555555555667766 9999999999999999999987432111
Q ss_pred cchhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 143 EKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 143 ~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
..+.....++ ..|+++++ |.+++...+|+++.+++
T Consensus 276 ~~~a~~~~~~-~pdi~t~s--K~~~~G~~~G~~~~~~~ 310 (453)
T 4ffc_A 276 AWFASEHEGI-VPDIVTMA--KGIAGGMPLSAVTGRAE 310 (453)
T ss_dssp SSSTHHHHTC-CCSEEEEC--GGGGTTSSCEEEEEEHH
T ss_pred ccchhhhcCC-CcchHhhh--hhhcCCcCeEEEEECHH
Confidence 1111111222 35777765 98876566788777553
No 216
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.63 E-value=1.5e-13 Score=142.64 Aligned_cols=167 Identities=16% Similarity=0.129 Sum_probs=105.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC---------CCcEEEEecCC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG---------MDNVIRVKTNE 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~---------~~~v~~v~~~~ 74 (448)
.++|++|||+||..|+.+++... ...|-+ ..+.+|......|.+...+....+.. ...+..++.+.
T Consensus 116 ~v~~~~sGseA~~~Aik~a~~~~----~~~g~~-~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 190 (476)
T 3i5t_A 116 RIFFTTGGSTAVDSALRFSEFYN----NVLGRP-QKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPN 190 (476)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH----HHTTCT-TCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCC
T ss_pred EEEEeCchHHHHHHHHHHHHHHH----HhcCCC-CCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCc
Confidence 58999999999999999988642 112211 13455666777777666555443321 11234444322
Q ss_pred C--C-CcC--------HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccc
Q psy14299 75 R--G-QMI--------CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSL 139 (448)
Q Consensus 75 ~--g-~id--------~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~ 139 (448)
. . ..| +++|++.+++.. ..++.+|++..+.+++|.+.| +++|.++|++||+++++|++|.+..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~g 268 (476)
T 3i5t_A 191 PRHAGNRSQEAFLDDLVQEFEDRIESLG--PDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFG 268 (476)
T ss_dssp GGGCTTSCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred ccccCCCchHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCc
Confidence 1 1 112 789999887421 124678888888888887666 9999999999999999999987532
Q ss_pred ccccchhhh-hcCCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 140 IFSEKYSFV-LKGINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 140 ~~~~~~~~~-~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
.....+... ..++ ..|+++++ |.+++. ..+|+++.+++
T Consensus 269 r~G~~~~~~~~~~v-~pdi~t~s--K~l~~G~~plg~v~~~~~ 308 (476)
T 3i5t_A 269 RCGEWFASEKVFGV-VPDIITFA--KGVTSGYVPLGGLAISEA 308 (476)
T ss_dssp TTSSSCHHHHTTCC-CCSEEEEC--GGGGTTSSCCEEEEECHH
T ss_pred cccCceeeecccCC-Ccchhhhh--hhhcCCCcCeEEEEECHH
Confidence 111111111 1233 36888765 988875 56788777553
No 217
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.63 E-value=9.3e-15 Score=149.60 Aligned_cols=150 Identities=16% Similarity=0.164 Sum_probs=115.4
Q ss_pred eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecC-CCchHHHHH-----------HHHhCCCCCcEEEEecCCC
Q psy14299 8 LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSE-DSHYSMLKA-----------AHWLGIGMDNVIRVKTNER 75 (448)
Q Consensus 8 t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~-~~H~s~~~~-----------~~~~g~~~~~v~~v~~~~~ 75 (448)
++|||++|..++.+..+ +++.|+++. ..|...... ++..|+ +++.++.+++
T Consensus 97 ~~sGt~Ai~~al~all~--------------pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~---~~~~v~~~~~ 159 (427)
T 3i16_A 97 FVNGTHALGAALFGNLR--------------PGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGI---NYKQVDLKED 159 (427)
T ss_dssp CCSHHHHHHHHHHHHCC--------------TTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTC---EEEECCCCTT
T ss_pred CccHHHHHHHHHHHHhC--------------CCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCC---EEEEecCccC
Confidence 89999999888776543 677888887 777665533 344566 7889999889
Q ss_pred CCcCHHHHHHHHHHhhhcCCCcEEEEEec----cCCccccccCHHHHHHHHHH--cCCEEEEecccccccccccchhhhh
Q psy14299 76 GQMICSFLEQTIQTSLAEKKIPLFVNATA----GTTVLGAFDPLDEIATVCEK--YDLWMHVDACWGGSLIFSEKYSFVL 149 (448)
Q Consensus 76 g~id~e~Le~~l~~~~~~~~~~~lVv~~~----~~t~tG~~~~l~~I~~ia~~--~g~~l~VD~A~~~~~~~~~~~~~~~ 149 (448)
|.+|+++|++++++ +.++++|++++ +++++|.+.|+++|+++||+ +|++++||++|+.+........
T Consensus 160 g~~D~e~l~~~l~~----~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~--- 232 (427)
T 3i16_A 160 GKPNLEEIEKVLKE----DESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTD--- 232 (427)
T ss_dssp SSCCHHHHHHHHHT----CTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGG---
T ss_pred CCcCHHHHHHHhhC----CCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCCccc---
Confidence 99999999999973 12589999999 99999999999999999999 9999999999987763222111
Q ss_pred cCCCCccEEEECCccccCCCC--ceEEEEEeccchhhh
Q psy14299 150 KGINRANSVSWNPHKMLGAPL--QCSILLIKEKGLLHQ 185 (448)
Q Consensus 150 ~~~~~aD~~~~s~hK~l~~P~--g~G~l~vr~~~~~~~ 185 (448)
..+|+++.|+||+++++. ..|+++.+ +++...
T Consensus 233 ---~gaDiv~~S~sK~lgg~g~~~gG~i~~~-~~li~~ 266 (427)
T 3i16_A 233 ---VGADLIAGSLIKNIGGGIAPTGGYLAGT-KDCIEK 266 (427)
T ss_dssp ---GTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHH
T ss_pred ---cCCeEEEecCcccCCCCCCceEEEEEEC-HHHHHH
Confidence 147999999999998732 23666664 444444
No 218
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.62 E-value=6.3e-15 Score=149.36 Aligned_cols=159 Identities=9% Similarity=-0.003 Sum_probs=112.5
Q ss_pred EEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec--CCCCCcCHHHH
Q psy14299 6 FLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT--NERGQMICSFL 83 (448)
Q Consensus 6 ~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~--~~~g~id~e~L 83 (448)
..|.|||.++..+...++... .+++.|+++...|.++...++..|. +++.+|. ++++.+|+++|
T Consensus 108 ~~~~~g~ga~~~~~~~~~~~~-----------~~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l 173 (409)
T 4eu1_A 108 CQTLGGTGALRIGGDLLNRFV-----------ANCNRIYGPDVGYPNHESIFAKAGM---ELTPYSYYDPATKGLNLAGM 173 (409)
T ss_dssp EEESHHHHHHHHHHHHGGGTS-----------SSCCEEEEESSCCTHHHHHHHHTTC---EEEEECCEETTTTEECHHHH
T ss_pred eecccchHHHHHHHHHHHHhc-----------CCCCEEEEeCCCcHhHHHHHHHcCC---eEEEEEeecCcCCcCcHHHH
Confidence 459999999876654433221 2567899999999999999999998 7888887 35678999999
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHHHHcCCEEEEecccccccccc---cchhh-hhcCCCCcc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIFS---EKYSF-VLKGINRAN 156 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~~---~~~~~-~~~~~~~aD 156 (448)
++.+++. ..++++++++.++|+||.+.+ +++|+++|++||+++++|++|+...... +.... .+.+...-.
T Consensus 174 ~~~l~~~---~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (409)
T 4eu1_A 174 LECLDKA---PEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNL 250 (409)
T ss_dssp HHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCC
T ss_pred HHHHHhC---CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcE
Confidence 9999752 124667777999999999877 5559999999999999999988654321 01110 011111123
Q ss_pred EEEECCccccCCCC-ceEEE--EEeccc
Q psy14299 157 SVSWNPHKMLGAPL-QCSIL--LIKEKG 181 (448)
Q Consensus 157 ~~~~s~hK~l~~P~-g~G~l--~vr~~~ 181 (448)
+++.+++|.++.|. .+|++ ++.++.
T Consensus 251 i~~~S~SK~~g~~G~riG~~~~v~~~~~ 278 (409)
T 4eu1_A 251 IVAQSFSKNFGLYGHRCGALHISTASAE 278 (409)
T ss_dssp EEEEECTTTSSCGGGCCEEEEEECSSHH
T ss_pred EEEecCcccccCccCCceEEEEEeCCHH
Confidence 56678899987552 35665 555544
No 219
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.61 E-value=1.3e-13 Score=140.82 Aligned_cols=153 Identities=12% Similarity=0.066 Sum_probs=95.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCC----------------CcE
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGM----------------DNV 67 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~----------------~~v 67 (448)
.++||+|||++|..++..++..- .++.+|..+...|..........+.+. ..+
T Consensus 111 ~v~~~~sGsea~~~al~~a~~~~-----------~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (429)
T 4e77_A 111 MVRMVNSGTEATMSAIRLARGYT-----------GRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHT 179 (429)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH-----------CCCEEEEETTCCCC------------------CCCTTSCGGGGTTE
T ss_pred EEEEeCcHHHHHHHHHHHHHHhh-----------CCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCce
Confidence 57999999999999998877531 134556666666766553332222110 012
Q ss_pred EEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccccccc
Q psy14299 68 IRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSE 143 (448)
Q Consensus 68 ~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~ 143 (448)
..++.+ |+++|++++++. +.++.+|+++...++.|.+.| +++|.++|++||+++|+|++|++. ....
T Consensus 180 ~~~~~~-----d~~~le~~l~~~---~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~ 250 (429)
T 4e77_A 180 LTCTYN-----DLASVRQAFEQY---PQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVAL 250 (429)
T ss_dssp EEECTT-----CHHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBT
T ss_pred eecCCC-----CHHHHHHHHHhc---CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCc
Confidence 333332 899999999752 224667777777777788888 999999999999999999999843 2111
Q ss_pred chhhhhcCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 144 KYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 144 ~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
.......++ ..|++++ .|.+++....|+++.++
T Consensus 251 ~~~~~~~~~-~pdi~t~--sK~~~~G~~~G~~~~~~ 283 (429)
T 4e77_A 251 AGAQDYYHV-IPDLTCL--GKIIGGGMPVGAFGGRR 283 (429)
T ss_dssp TCHHHHTTC-CCSEEEE--EGGGGTTSCCEEEEECH
T ss_pred chHHHhcCC-CCCeeee--cccccCCCCeEEEEECH
Confidence 111111122 2477654 59888766788776644
No 220
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.60 E-value=3.5e-14 Score=144.74 Aligned_cols=153 Identities=12% Similarity=-0.021 Sum_probs=100.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhC-------CC---------CCcE
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLG-------IG---------MDNV 67 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g-------~~---------~~~v 67 (448)
.++||+|||++|..++..++..- .++.+|+.....|.+...+....+ .. ...+
T Consensus 110 ~v~~~~ggsea~~~al~~a~~~~-----------~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (427)
T 3fq8_A 110 MVRFVNSGTEACMAVLRIMRAYT-----------GRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANT 178 (427)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH-----------CCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTE
T ss_pred EEEEeCCHHHHHHHHHHHHHHhh-----------CCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCce
Confidence 57999999999999998776531 134455555666643322111111 00 0024
Q ss_pred EEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccccccc
Q psy14299 68 IRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSE 143 (448)
Q Consensus 68 ~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~ 143 (448)
..+|.+ |+++|++++++. +.++++|+++...+++|.+.| +++|.++|++||+++++|++|++. ....
T Consensus 179 ~~~~~~-----d~~~le~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~ 249 (427)
T 3fq8_A 179 LTTPYN-----DLEAVKALFAEN---PGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAY 249 (427)
T ss_dssp EEEETT-----CHHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBT
T ss_pred eecCCC-----CHHHHHHHHHhC---CCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCc
Confidence 455544 899999999762 235788888888888999999 999999999999999999999843 2111
Q ss_pred chhhhhcCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 144 KYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 144 ~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
.......++ ..|+++++ |++++...+|+++.++
T Consensus 250 ~~~~~~~~~-~~di~t~s--K~~~~G~~~G~~~~~~ 282 (427)
T 3fq8_A 250 GGVQEKFGV-TPDLTTLG--KIIGGGLPVGAYGGKR 282 (427)
T ss_dssp THHHHHTTC-CCSEEEEC--GGGGTTSSCEEEEECH
T ss_pred chhhHhcCC-CCChhhhh--hhhhCCcceEEEEEcH
Confidence 111111222 25777665 9988544588876644
No 221
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.60 E-value=2.1e-14 Score=147.02 Aligned_cols=148 Identities=13% Similarity=0.106 Sum_probs=113.1
Q ss_pred eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecC-CCchHHH-----------HHHHHhCCCCCcEEEEecCCC
Q psy14299 8 LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSE-DSHYSML-----------KAAHWLGIGMDNVIRVKTNER 75 (448)
Q Consensus 8 t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~-~~H~s~~-----------~~~~~~g~~~~~v~~v~~~~~ 75 (448)
++|||+||..++.+..+ |++.|++++ ..|.... ..++..|+ +++.++. ++
T Consensus 98 ~~sGt~A~~~al~all~--------------pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~---~~~~v~~-~~ 159 (427)
T 3hvy_A 98 FVNGTHAIGAALFGNLR--------------PNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGV---KYKMVDL-KD 159 (427)
T ss_dssp CCSHHHHHHHHHHHTCC--------------TTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTC---EEEECCC-BT
T ss_pred CCcHHHHHHHHHHHhcC--------------CCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCC---EEEEecC-CC
Confidence 79999999888766433 677888887 6666544 23344566 7888888 78
Q ss_pred CCcCHHHHHHHHHHhhhcCCCcEEEEEec----cCCccccccCHHHHHHHHHH--cCCEEEEecccccccccccchhhhh
Q psy14299 76 GQMICSFLEQTIQTSLAEKKIPLFVNATA----GTTVLGAFDPLDEIATVCEK--YDLWMHVDACWGGSLIFSEKYSFVL 149 (448)
Q Consensus 76 g~id~e~Le~~l~~~~~~~~~~~lVv~~~----~~t~tG~~~~l~~I~~ia~~--~g~~l~VD~A~~~~~~~~~~~~~~~ 149 (448)
+.+|+++|++++++ +.++++|++++ +++++|.+.|+++|+++||+ +|++++||++|+.+........
T Consensus 160 ~~~d~e~l~~~i~~----~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~~--- 232 (427)
T 3hvy_A 160 GKVDINTVKEELKK----DDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEPTD--- 232 (427)
T ss_dssp TBCCHHHHHHHHHH----CTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGGG---
T ss_pred CCcCHHHHHHHhhC----CCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCCCCcc---
Confidence 89999999999974 12589999999 99999999999999999999 8999999999987763222111
Q ss_pred cCCCCccEEEECCccccCC---CCceEEEEEeccchhhh
Q psy14299 150 KGINRANSVSWNPHKMLGA---PLQCSILLIKEKGLLHQ 185 (448)
Q Consensus 150 ~~~~~aD~~~~s~hK~l~~---P~g~G~l~vr~~~~~~~ 185 (448)
..+|+++.|+||++++ |.| |+++.+ +++...
T Consensus 233 ---~gaDiv~~S~sK~lgg~g~~~G-G~i~~~-~~li~~ 266 (427)
T 3hvy_A 233 ---VGADIIAGSLIKNIGGGIATTG-GYIAGK-EEYVTQ 266 (427)
T ss_dssp ---GTCSEEEEETTSGGGTTTCCSC-EEEEEC-HHHHHH
T ss_pred ---cCCeEEEECCcccccccccceE-EEEEEC-HHHHHH
Confidence 1479999999999987 443 666664 444444
No 222
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.59 E-value=6.6e-14 Score=147.82 Aligned_cols=161 Identities=10% Similarity=0.073 Sum_probs=114.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHh-cCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCC--CCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYR-LDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNER--GQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~-~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~--g~id~ 80 (448)
..++|+|+++++.+++.+...+ +. .+++.|+++...|..+...+.+.+.+. +++.++.+++ +.+|+
T Consensus 167 ~I~~t~G~~eal~~~~~~l~~~~l~----------~~Gd~Vlv~~P~y~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~ 235 (546)
T 2zy4_A 167 NLFAVEGGTAAMAYIFESLKLNGLL----------KAGDKVAIGMPVFTPYIEIPELAQYAL-EEVAINADPSLNWQYPD 235 (546)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHTTSS----------CTTCEEEEEESCCHHHHHHHHSTTSCC-EEEEEECBGGGTTBCCH
T ss_pred eEEEECCHHHHHHHHHHHhhhhhcC----------CCCCEEEEeCCCCccHHHHHHHcCCCc-EEEEEecCcccCCCCCH
Confidence 5789999999988877654211 11 266788999999999998877665332 5788887654 46999
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC---HHHHHHHH--HHcCCEEEEecccccccccccchhhhhcCCCCc
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP---LDEIATVC--EKYDLWMHVDACWGGSLIFSEKYSFVLKGINRA 155 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~---l~~I~~ia--~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~a 155 (448)
++|++.+. .++++|++++++|+||.+.+ +++|.++| +++|+++++|++|+........... . ....
T Consensus 236 ~~l~~~~~------~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~-~--~~~~ 306 (546)
T 2zy4_A 236 SELDKLKD------PAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFA-I--CPEN 306 (546)
T ss_dssp HHHGGGGS------TTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHH-H--CGGG
T ss_pred HHHHHhhC------CCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHH-h--CCCC
Confidence 99988763 25889999999999998876 56678888 7899999999999865431111111 1 1124
Q ss_pred cEEEECCccccCCCC-ceEEEEEeccchhh
Q psy14299 156 NSVSWNPHKMLGAPL-QCSILLIKEKGLLH 184 (448)
Q Consensus 156 D~~~~s~hK~l~~P~-g~G~l~vr~~~~~~ 184 (448)
++++.|++|+++.|. -+|+++..++++..
T Consensus 307 ~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~ 336 (546)
T 2zy4_A 307 TLLVYSFSKYFGATGWRLGVVAAHQQNVFD 336 (546)
T ss_dssp EEEEEESTTTTTCGGGCEEEEEEESSCHHH
T ss_pred EEEEEeCccccCCCCcceEEEEECCHHHHH
Confidence 688899999987552 37888886653433
No 223
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.58 E-value=3.9e-14 Score=144.85 Aligned_cols=153 Identities=14% Similarity=0.027 Sum_probs=99.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH-------------HhCCCC---CcE
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH-------------WLGIGM---DNV 67 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~-------------~~g~~~---~~v 67 (448)
.++||+|||++|..++.++|... .++.+|+.+...|.....+.. ..|+.. ..+
T Consensus 114 ~v~~~~sgseA~~~al~~ar~~~-----------~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~ 182 (434)
T 2epj_A 114 MIRFVNSGTEATMTAIRLARGYT-----------GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLT 182 (434)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH-----------CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTE
T ss_pred EEEEeCCHHHHHHHHHHHHHHhh-----------CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCce
Confidence 47899999999999998876421 134555555555543221110 012210 135
Q ss_pred EEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccccccc
Q psy14299 68 IRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSE 143 (448)
Q Consensus 68 ~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~ 143 (448)
..+|.+ |+++|++++++. +.++++|+++...+++|.+.| +++|.++|++||+++++|++|++. ....
T Consensus 183 ~~~~~~-----d~~~le~~l~~~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~ 253 (434)
T 2epj_A 183 LVTPYN-----DVEALERVFAEY---GDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGL 253 (434)
T ss_dssp EEEETT-----CHHHHHHHHHHH---GGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSST
T ss_pred EecCCC-----CHHHHHHHHHhC---CCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCc
Confidence 566653 899999999752 124677888777777999888 999999999999999999999843 2111
Q ss_pred chhhhhcCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 144 KYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 144 ~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
.......++ ..|+++ ++|++++...+|+++.++
T Consensus 254 ~~~~~~~~~-~~di~s--~sK~l~~G~~~G~v~~~~ 286 (434)
T 2epj_A 254 EGAQGYFNI-EGDIIV--LGKIIGGGFPVGAVAGSR 286 (434)
T ss_dssp THHHHHHTC-CCSEEE--EEGGGGTTSSCEEEEECH
T ss_pred chhhHHhCC-CCCeee--ecchhcCCcceeeeeecH
Confidence 111111122 367764 469988744578888765
No 224
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.58 E-value=5.3e-14 Score=142.23 Aligned_cols=139 Identities=9% Similarity=0.037 Sum_probs=97.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCe----EEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcC
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPL----CMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~----~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id 79 (448)
..++|+|+++++.+++.+... +++ .|+++...|.++...++..|. +++.++.+.++ ++
T Consensus 93 ~i~~t~G~~~al~~~~~~l~~--------------~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~d~~~-l~ 154 (391)
T 3bwn_A 93 YIVVGTGSTQLCQAAVHALSS--------------LARSQPVSVVAAAPFYSTYVEETTYVRS---GMYKWEGDAWG-FD 154 (391)
T ss_dssp EEEEEEHHHHHHHHHHHHHHH--------------TSSSSSEEEEECSSCCTHHHHHHHTTCB---TTEEEEEESTT-CC
T ss_pred eEEEeCChHHHHHHHHHHhcC--------------CCCCCcceEEEcCCCchhHHHHHHHcCC---eEEEecCCHHH-cC
Confidence 589999999999888877665 455 799999999999999998888 67777776432 11
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEE
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVS 159 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~ 159 (448)
. .++++|++++++|+||.+.+ +|++-++++++++++|++|+.... .. +......++++
T Consensus 155 ---------~-----~~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~~~--~~----l~~~~~~~i~~ 212 (391)
T 3bwn_A 155 ---------K-----KGPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWPHY--TP----ITRRQDHDIML 212 (391)
T ss_dssp ---------C-----CSCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCSTTT--SC----CCCCBCCSEEE
T ss_pred ---------C-----CCCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCCCC--Cc----cccCCCCeEEE
Confidence 1 25789999999999999876 555422333499999999984211 00 11112357899
Q ss_pred ECCccccCCCC-ceEEEEEeccch
Q psy14299 160 WNPHKMLGAPL-QCSILLIKEKGL 182 (448)
Q Consensus 160 ~s~hK~l~~P~-g~G~l~vr~~~~ 182 (448)
.|++|.++.|. -+|++++.++++
T Consensus 213 ~S~SK~~g~~GlRiG~~~~~~~~l 236 (391)
T 3bwn_A 213 FTFSKITGHAGSRIGWALVKDKEV 236 (391)
T ss_dssp EEHHHHHSCGGGCEEEEEECCHHH
T ss_pred EechhhcCCCccceEEEEecCHHH
Confidence 99999887442 248877744443
No 225
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.56 E-value=2.7e-13 Score=139.42 Aligned_cols=153 Identities=14% Similarity=0.020 Sum_probs=94.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHH----------hCCCC---CcEEEE
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHW----------LGIGM---DNVIRV 70 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~----------~g~~~---~~v~~v 70 (448)
.++||+|||+|+..++.+++... .++.+|+.+...|......... .|+.. ..+..+
T Consensus 115 ~v~~~~gg~eA~~~al~~ar~~~-----------~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 183 (453)
T 2cy8_A 115 KLRFTGSGTETTLLALRVARAFT-----------GRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLI 183 (453)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHH-----------CCCEEEEECC----------------------------CGGGEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHHhh-----------CCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeec
Confidence 47899999999999998876421 1445566555555333222111 12210 124444
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccchh
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYS 146 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~ 146 (448)
+. .|+++|++++++. +.++++|+++...+++|.+.| +++|.++|++||+++++|++|++. .......
T Consensus 184 ~~-----~d~~~le~~l~~~---~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~ 254 (453)
T 2cy8_A 184 RP-----DDIEGMREVFANH---GSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGM 254 (453)
T ss_dssp CT-----TCHHHHHHHHHHH---GGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHH
T ss_pred CC-----CCHHHHHHHHHhc---CCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhh
Confidence 43 2899999999752 124677777777677998887 999999999999999999999843 2211111
Q ss_pred hhhcCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 147 FVLKGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 147 ~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
....++ ..|++ ++.|+++++..+|+++.++
T Consensus 255 ~~~~~~-~~di~--s~sK~l~~G~~~G~v~~~~ 284 (453)
T 2cy8_A 255 QALLDV-QPDLT--CLAKASAGGLPGGILGGRE 284 (453)
T ss_dssp HHHHTC-CCSEE--EEEGGGGTTSSCEEEEECH
T ss_pred hHHhCC-CCcEE--EEChhhhCCcceEEEechH
Confidence 111222 25766 4569998766789888865
No 226
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.55 E-value=4.1e-14 Score=145.11 Aligned_cols=147 Identities=14% Similarity=0.106 Sum_probs=114.9
Q ss_pred eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecC-CCchHHHHHHHH----------hCCCCCcEEEEecCCCC
Q psy14299 8 LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSE-DSHYSMLKAAHW----------LGIGMDNVIRVKTNERG 76 (448)
Q Consensus 8 t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~-~~H~s~~~~~~~----------~g~~~~~v~~v~~~~~g 76 (448)
+++||+||..++.+..+ +++.|+++. ..|.++...+.+ .|. +++.++.++++
T Consensus 89 ~~sGt~Ai~~al~al~~--------------~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~---~~~~v~~~~~~ 151 (431)
T 3ht4_A 89 IISGTHAISTALFGILR--------------PGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNI---GYNAVPLTEGG 151 (431)
T ss_dssp SCSHHHHHHHHHHTTCC--------------TTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTC---EEEECCBCTTS
T ss_pred eeCHHHHHHHHHHHhCC--------------CCCEEEEeCCCCchhHHHHHhhcccccchHHHcCC---EEEEeCCCCCC
Confidence 45889999888765432 567788887 889888876643 456 78999998899
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEec----cCCccccccCHHHHHHHHHH--cCCEEEEecccccccccccchhhhhc
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATA----GTTVLGAFDPLDEIATVCEK--YDLWMHVDACWGGSLIFSEKYSFVLK 150 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~----~~t~tG~~~~l~~I~~ia~~--~g~~l~VD~A~~~~~~~~~~~~~~~~ 150 (448)
.+|+++|++++++ ++++|+++. +++++|...|+++|+++|++ +|++++||++|+.+....+..
T Consensus 152 ~~d~e~l~~~l~~------~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~----- 220 (431)
T 3ht4_A 152 LVDFEAVAAAIHS------NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC----- 220 (431)
T ss_dssp SBCHHHHHHHCCT------TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG-----
T ss_pred CcCHHHHHhhcCC------CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc-----
Confidence 9999999999964 588999997 77778889999999999999 999999999999876432211
Q ss_pred CCCCccEEEECCccccCC---CCceEEEEEeccchhhh
Q psy14299 151 GINRANSVSWNPHKMLGA---PLQCSILLIKEKGLLHQ 185 (448)
Q Consensus 151 ~~~~aD~~~~s~hK~l~~---P~g~G~l~vr~~~~~~~ 185 (448)
.. .+|+++.|+||++++ |.| |+++.++ ++...
T Consensus 221 ~~-g~Di~~~S~sK~lgg~~~~~G-G~v~~~~-~li~~ 255 (431)
T 3ht4_A 221 HV-GADLMAGSLIKNPGGGIVKTG-GYIVGKE-QYVEA 255 (431)
T ss_dssp GT-TCSEEEEETTSGGGTTTCSSC-EEEEECH-HHHHH
T ss_pred cc-CCeEEEcCccccCCCCCCCce-EEEEecH-HHHHH
Confidence 11 379999999999766 666 7777654 44333
No 227
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.52 E-value=1.8e-12 Score=130.94 Aligned_cols=297 Identities=16% Similarity=0.134 Sum_probs=175.2
Q ss_pred eCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCch---HHH-----HHHHHhCCCCCcEEEEecC-CCCCc
Q psy14299 8 LPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHY---SML-----KAAHWLGIGMDNVIRVKTN-ERGQM 78 (448)
Q Consensus 8 t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~---s~~-----~~~~~~g~~~~~v~~v~~~-~~g~i 78 (448)
..+|+.||+.+..+..+ |++.|+.-+..|- +-- ......|.-- +....+++ +++.|
T Consensus 126 P~SGs~AN~avy~All~--------------PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~-~~~~Y~vd~~t~~I 190 (490)
T 3ou5_A 126 PYSGSPANLAVYTALLQ--------------PHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFF-ESMPYKLNPKTGLI 190 (490)
T ss_dssp CSSHHHHHHHHHHHHCC---------------CCCEECBC-----------------------------CBCEETTTTEE
T ss_pred cCCHHHHHHHHHHHHcC--------------CCCEEEecccCCCCcccccccCCCcccccccccc-cccccccCCCCCcc
Confidence 46899999988877665 5666766555442 211 1122223311 23333444 46899
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEE
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSV 158 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~ 158 (448)
|.+++++...+. +|++|++-... .--..|++++.+||++.|++|++|.||-.|......++.-+ ..+|++
T Consensus 191 Dyd~~~~~A~~~-----kPklIi~G~Sa--Y~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~---~~ADvV 260 (490)
T 3ou5_A 191 DYNQLALTARLF-----RPRLIIAGTSA--YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF---KHADIV 260 (490)
T ss_dssp CHHHHHHHHHHH-----CCSEEEECCSS--CCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGG---GTCSEE
T ss_pred cHHHHHHHHhhc-----CCCeEEECCcc--CccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCcc---ccceEE
Confidence 999999999874 68888875533 45678999999999999999999999998877544443323 358999
Q ss_pred EECCccccCCCCceEEEEEeccchhhhhccCCcc---cccccCcccccccCCCCCcccCCCCchhHHHHHHHHHhChHHH
Q psy14299 159 SWNPHKMLGAPLQCSILLIKEKGLLHQANATAAT---YLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLGF 235 (448)
Q Consensus 159 ~~s~hK~l~~P~g~G~l~vr~~~~~~~~~~~~~~---y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ 235 (448)
+.+.||.|.+|.| |++++++... ........ |-..........+ +++++.....
T Consensus 261 TtTTHKTLrGPrG-G~Il~~~~~~--~~~~k~~~~~~~~~~kkin~aVFP-----g~qggp~~h~--------------- 317 (490)
T 3ou5_A 261 TTTTHKTLRGARS-GLIFYRKGVK--AVDPKTGREIPYTFEDRINFAVFP-----SLQGGPHNHA--------------- 317 (490)
T ss_dssp EEESSSTTCSCSC-EEEEEECSEE--EECC--CCEEECCCHHHHHHHHTT-----TTCSSCCHHH---------------
T ss_pred eccccccccCCCc-eEEEeccccc--cccccccchhHHHHHHHHHhhcCc-----cccccchHHH---------------
Confidence 9999999999984 5556655310 00000000 0000000000000 0111111100
Q ss_pred HHHHHHhhhhccCCCccchhhhhhhhhhhhhhhhhhhhhhhccccccccccCCCCCccccccchhhHHHHHHHHHhcCcc
Q psy14299 236 RHFVDNAVDCSRGSMTFSTLLCFDLQGLLHQANATAATYLFQQDKFYDVSFDTGDKSVQCGRKVDAFKLWLMWKARGNLG 315 (448)
Q Consensus 236 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 315 (448)
+.+.++++......-
T Consensus 318 -----------------------------------------------------------------IAAkAVaf~Ea~~p~ 332 (490)
T 3ou5_A 318 -----------------------------------------------------------------IAAVAVALKQACTPM 332 (490)
T ss_dssp -----------------------------------------------------------------HHHHHHHHHHHHSHH
T ss_pred -----------------------------------------------------------------HHHHHHHHHHHHhHh
Confidence 122334455444555
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEeccCCceeeEEEEeeccCCCccccchhhhhhhhhhhHHHHHHHHhCCcEEEEe
Q psy14299 316 FRHFVDNAVDCSRYFLSQISQRPGFRLVIPEFQCTNICFWFIPVSLRDKVEDETWWSTLSKVAPRIKEKLVLGGTLMIGY 395 (448)
Q Consensus 316 ~~~~~~~~~~l~~~~~~~L~~~pg~~l~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~~~ 395 (448)
+++..++..++++.+.+.|.+. ||+++.+....+.+.+.+.+.++++ .+..+.|.+.| |.+.-
T Consensus 333 fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsGgTdnHlvLvDl~~~g~tG---------------~~ae~~Le~ag-ItvNk 395 (490)
T 3ou5_A 333 FREYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKGLDG---------------ARAERVLELVS-ITANK 395 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTCCH---------------HHHHHHHHHTT-EECEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCeeecCCCCceEEEEeccccCCCH---------------HHHHHHHHHcC-cEECC
Confidence 6778888899999999999998 9999844456677777766666553 24556666777 55543
Q ss_pred eecCC-c--ccccEEEEEecC--CCCCCHHHHHHHHHHHHHHHH
Q psy14299 396 QPLQH-R--NLHNFFRLVTTC--HPASSRQDMDYAIDQIELRGA 434 (448)
Q Consensus 396 ~~~~g-~--~~~~~lRis~~~--~~~~t~edid~l~~al~~~~~ 434 (448)
....+ + ..++.||++.-. .....++|++.+.+.|.++..
T Consensus 396 N~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 396 NTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp ECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 32221 1 113579998731 223567899999988887653
No 228
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.49 E-value=4.7e-13 Score=136.36 Aligned_cols=152 Identities=15% Similarity=0.091 Sum_probs=97.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHH-------------hCCCC---CcE
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHW-------------LGIGM---DNV 67 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~-------------~g~~~---~~v 67 (448)
.++||+|||+++..++..+|... .++.+|+.+...|.....+... .|+.. ..+
T Consensus 110 ~v~~~~~g~ea~~~al~~ar~~~-----------~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~ 178 (424)
T 2e7u_A 110 LVRFVNSGTEATMSALRLARGYT-----------GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLT 178 (424)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH-----------CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTE
T ss_pred EEEEeCCHHHHHHHHHHHHHHhh-----------CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCce
Confidence 47899999999999998865431 1455566666666433222111 12100 135
Q ss_pred EEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEeccccccccccc
Q psy14299 68 IRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSE 143 (448)
Q Consensus 68 ~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~ 143 (448)
..+|.+ |+++|++++++. +.++++|+++...+++|.+.| +++|.++ ++||+++++|++|++. ....
T Consensus 179 ~~~~~~-----d~~~le~~l~~~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~ 248 (424)
T 2e7u_A 179 LVLEYN-----DPEGLREVLKRR---GEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAF 248 (424)
T ss_dssp EEECTT-----CHHHHHHHHHHH---GGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSST
T ss_pred EeCCCC-----CHHHHHHHHHhC---CCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccch
Confidence 555542 899999999752 124667777666666898887 9999999 9999999999999843 2211
Q ss_pred chhhhhcCCCCccEEEECCccccCCCCceEEEEEec
Q psy14299 144 KYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKE 179 (448)
Q Consensus 144 ~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~ 179 (448)
.......++ ..|++ +++|++++...+|+++.++
T Consensus 249 ~~~~~~~~~-~~di~--s~sK~l~~G~~~G~~~~~~ 281 (424)
T 2e7u_A 249 GGATELLGL-KPDLV--TLGKILGGGLPAAAYAGRR 281 (424)
T ss_dssp THHHHHHTC-CCSEE--EECGGGGTTSSCEEEEECH
T ss_pred hHHHHHhCC-Ccchh--hhhhhhhCCcceEEEEEcH
Confidence 111111222 25766 5579998755688887765
No 229
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.44 E-value=8.8e-12 Score=128.18 Aligned_cols=153 Identities=11% Similarity=0.019 Sum_probs=100.8
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC--CCcEEEEecCCCCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG--MDNVIRVKTNERGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~--~~~v~~v~~~~~g~id~e 81 (448)
.++|+++|||||..|+..+|..-. ...+|......|-.........+-. ...+..+|.+ |.+
T Consensus 145 ~v~f~~SGsEA~e~AiklAr~~tg-----------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~n-----d~~ 208 (454)
T 4ao9_A 145 QLRFTNSGTEANLMALTAALHFTG-----------RRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYN-----DAQ 208 (454)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHT-----------CCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTT-----CHH
T ss_pred EEEEeCchHHHHHHHHHHHHhccc-----------CCeEEEEeCCcCCccccccccccCccCCCCcccCCCc-----hHH
Confidence 478999999999999999987521 3345555666665332111111100 1134555554 899
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccE
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANS 157 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~ 157 (448)
.+++.+++. +..+.+|++.-...+.|.+.| +++|.++|++||+++++|+.+.+ -. ...+.....++ ..|.
T Consensus 209 ~l~~~l~~~---~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG-R~-G~~~a~e~~gv-~PDi 282 (454)
T 4ao9_A 209 TARAQIERH---GPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS-RL-APHGLANKLGI-RSDL 282 (454)
T ss_dssp HHHHHHHHT---GGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG-GG-STTCHHHHHTC-CCSE
T ss_pred HHHHHHhhc---CCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC-CC-ccccchhccCC-CCcE
Confidence 999999763 224667777777777888877 99999999999999999999874 11 11111112234 3688
Q ss_pred EEECCccccCCCCceEEEEEecc
Q psy14299 158 VSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 158 ~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
+++ .|.+++-...|.+..+++
T Consensus 283 ~t~--gK~lggG~Piga~~~~~e 303 (454)
T 4ao9_A 283 TTL--GKYIGGGMSFGAFGGRAD 303 (454)
T ss_dssp EEE--EGGGGTTSSCEEEEECHH
T ss_pred EEe--ccccCCCCcceeeeeHHH
Confidence 775 677766666888877664
No 230
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.43 E-value=1.4e-12 Score=133.40 Aligned_cols=146 Identities=9% Similarity=-0.050 Sum_probs=99.7
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++|+|+|+++.+++.+..... .+.+..+++.|+++...|..+...++..|. +++. +.+|+++|
T Consensus 125 ~iv~t~G~~~al~~~~~~l~~~~------~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~---~~~~------~~~d~~~l 189 (427)
T 2hox_A 125 YIVFGVGVTQLIHGLVISLSPNM------TATPDAPESKVVAHAPFYPVFREQTKYFDK---KGYV------WAGNAANY 189 (427)
T ss_dssp EEEEESHHHHHHHHHHHHHSCCT------TTCTTSCCEEEEECSSCCHHHHHHHHHSCB---TTEE------EEEEGGGG
T ss_pred EEEEeCCHHHHHHHHHHHHhhcc------ccccCCCCCEEEEeCCCcccHHHHHHHcCC---eeee------ecCCHHHH
Confidence 47899999999888877651000 000002678899999999999999999888 4443 24578888
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPH 163 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~h 163 (448)
++++++ ++++|++++++|+||.+.+ + +++ ++..+.|.++.......-. +. ...++++.|++
T Consensus 190 ~~~~~~------~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~s~~~----~~--~~~~i~~~S~S 250 (427)
T 2hox_A 190 VNVSNP------EQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPHYTPIK----YK--ADEDILLFTMS 250 (427)
T ss_dssp TTCSCG------GGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTTTSCCC----SC--BCCSEEEEEHH
T ss_pred HHhhcC------CceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCCCCccc----cC--CCceEEEEeCh
Confidence 887743 4789999999999999988 4 233 5678888876421110000 10 23689999999
Q ss_pred cccCCCCc--eEEEEEeccchhh
Q psy14299 164 KMLGAPLQ--CSILLIKEKGLLH 184 (448)
Q Consensus 164 K~l~~P~g--~G~l~vr~~~~~~ 184 (448)
|.++.| | +|+++++++++..
T Consensus 251 K~~g~~-G~RiG~~~~~~~~l~~ 272 (427)
T 2hox_A 251 KFTGHS-GSRFGWALIKDESVYN 272 (427)
T ss_dssp HHTSCG-GGCCEEEEECCHHHHH
T ss_pred hcCCCC-CceEEEEEECCHHHHH
Confidence 988744 4 7888885554443
No 231
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.41 E-value=1.6e-11 Score=124.91 Aligned_cols=154 Identities=12% Similarity=-0.007 Sum_probs=110.4
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec-CC-CCCcCHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT-NE-RGQMICS 81 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~-~~-~g~id~e 81 (448)
..+.|+||+.|+.+++.+.... .+ +.|+++...+..+...++..|. +++.+|. ++ ++.+|++
T Consensus 99 ~i~~t~G~~~al~~~~~~l~~~------------~~-d~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~ 162 (405)
T 3k7y_A 99 CTIQCIGGTGAIFVLLEFLKML------------NV-ETLYVTNPPYINHVNMIESRGF---NLKYINFFDYNLIDINYD 162 (405)
T ss_dssp EEEEEEHHHHHHHHHHHHHHTT------------TC-CEEEEESSCCHHHHHHHHTTTC---EEEEECCEETTTTEECHH
T ss_pred EEEEcCchHHHHHHHHHHHHhc------------CC-CEEEEeCCCCHhHHHHHHHcCC---eEEEEeccccccCCcCHH
Confidence 3589999999988887765542 26 7899999999999999999998 7888987 33 5789999
Q ss_pred HHHHHHHHhhhcCCCcEEEEEecc-CCccccccC---HHHHHHHHHHcCCEEEEeccccccccc-cc--chhh-hhcCCC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAG-TTVLGAFDP---LDEIATVCEKYDLWMHVDACWGGSLIF-SE--KYSF-VLKGIN 153 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~-~t~tG~~~~---l~~I~~ia~~~g~~l~VD~A~~~~~~~-~~--~~~~-~~~~~~ 153 (448)
+|++++.+. .++++++++.+ +|+||...+ +++|+++|++||+++++|.+|...... .+ .... .+....
T Consensus 163 ~l~~~l~~~----~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~ 238 (405)
T 3k7y_A 163 LFLNDLRNI----PNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKN 238 (405)
T ss_dssp HHHHHHHHS----CSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTT
T ss_pred HHHHHHHhC----CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcC
Confidence 999999752 23567777765 799998755 677889999999999999998754421 00 0000 011111
Q ss_pred CccEEEECCccccCCC-CceEEEEE
Q psy14299 154 RANSVSWNPHKMLGAP-LQCSILLI 177 (448)
Q Consensus 154 ~aD~~~~s~hK~l~~P-~g~G~l~v 177 (448)
.-=+++.|+.|.++.| .-+|++++
T Consensus 239 ~~~i~~~S~SK~~~l~GlRiG~~~~ 263 (405)
T 3k7y_A 239 IAFSVCQSFSKNMSLYGERAGALHI 263 (405)
T ss_dssp CCEEEEEECTTTSCCTTTTEEEEEE
T ss_pred CcEEEEeeCCccCCCccccceEEEE
Confidence 1125567899998744 45677653
No 232
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.35 E-value=8.3e-10 Score=113.71 Aligned_cols=162 Identities=11% Similarity=0.024 Sum_probs=100.2
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCC----------CCcEEEEecCC
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIG----------MDNVIRVKTNE 74 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~----------~~~v~~v~~~~ 74 (448)
++|+++|||||-.|+..||.... ...+|-.....|-...-+....+.. ...+..+|...
T Consensus 128 v~f~~sGsEA~e~AlklAr~~t~-----------r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~ 196 (456)
T 4atq_A 128 TVLFNSGAEAVENAVKVARLATG-----------RDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSY 196 (456)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHC-----------CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCC
T ss_pred EEEeCChHHHHHHHHHHHhhhhc-----------CCeEEEEecccCCccccccccccCccccccCCCCccccceeccccc
Confidence 68999999999999999987621 3344555566665554444443321 11355566432
Q ss_pred C------CCcCHHHHHHHHHHhhh--cCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccc
Q psy14299 75 R------GQMICSFLEQTIQTSLA--EKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFS 142 (448)
Q Consensus 75 ~------g~id~e~Le~~l~~~~~--~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~ 142 (448)
. ..-+.+.+++.++...+ .+..+.+|++.-.....|.+.| +++|.++|++||+++++|+.+.+..-..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG 276 (456)
T 4atq_A 197 PFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTG 276 (456)
T ss_dssp GGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred ccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCcc
Confidence 1 12245555555543211 1224566777666666676655 9999999999999999999887632211
Q ss_pred cchhhhhcCCCCccEEEECCccccCCCCceEEEEEecc
Q psy14299 143 EKYSFVLKGINRANSVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 143 ~~~~~~~~~~~~aD~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
.-+.....++ ..|+++++ |.+++-...|.+..+++
T Consensus 277 ~~~a~e~~gv-~PDivt~g--K~lggg~P~~av~~~~~ 311 (456)
T 4atq_A 277 EWFAVDHEGV-VPDIITMA--KGIAGGLPLSAITGRAD 311 (456)
T ss_dssp SSSGGGGTTC-CCSEEEEC--GGGGTTSSCEEEEEEHH
T ss_pred ccccccccCC-CCchhhhh--hcccCcCCceeeEecHH
Confidence 1111112234 37998875 76766667788888765
No 233
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.29 E-value=1e-10 Score=119.32 Aligned_cols=161 Identities=12% Similarity=0.060 Sum_probs=111.0
Q ss_pred EEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEec--CCCCCcCHHH
Q psy14299 5 PFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKT--NERGQMICSF 82 (448)
Q Consensus 5 g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~--~~~g~id~e~ 82 (448)
.+-|.|||.|...++......+. .|++.|++++....+.....+..|.. .+...+. +.+..+|.+.
T Consensus 112 ~~qt~ggtga~~~a~~~l~~~~~----------~pgd~V~ip~P~w~~y~~i~~~aG~~--~V~~~~~~~~~~~~~d~~~ 179 (420)
T 4h51_A 112 AVQTLSGTGAVSLGAKLLTRVFD----------AETTPIYLSDPTWPNHYGVVKAAGWK--NICTYAYYDPKTVSLNFEG 179 (420)
T ss_dssp EEEEEHHHHHHHHHHHHHTTTSC----------TTTSCEEEEESCCTHHHHHHHHTTCC--CEEEEECEEGGGTEECHHH
T ss_pred eeeecCchHHHHHHHHHHHHhcC----------CCCCEEEEecCCchhHHHHHHHcCCe--EEEeeccccccccCCCHHH
Confidence 45689999998888766554321 37778999999999999999999883 2433333 2356789999
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHcCCEEEEecccccccccc---cchhhh-hcCCCCc
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKYDLWMHVDACWGGSLIFS---EKYSFV-LKGINRA 155 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~g~~l~VD~A~~~~~~~~---~~~~~~-~~~~~~a 155 (448)
+.+.+.+. .+++++++.+.++|+||.. +.+++|+++|++++++++.|.+|....... +..... ......-
T Consensus 180 ~~~~l~~~---~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~ 256 (420)
T 4h51_A 180 MKKDILAA---PDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIE 256 (420)
T ss_dssp HHHHHHHS---CSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCC
T ss_pred HHHHHhcc---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCce
Confidence 99988752 3457788888999999976 457889999999999999999987654311 111100 0001011
Q ss_pred cEEEECCccccCCCC-ceEEEEEecc
Q psy14299 156 NSVSWNPHKMLGAPL-QCSILLIKEK 180 (448)
Q Consensus 156 D~~~~s~hK~l~~P~-g~G~l~vr~~ 180 (448)
=+++.|+.|.++.+. -+|.+.+..+
T Consensus 257 ~i~~~s~SK~~~~~G~RvG~~~~~~~ 282 (420)
T 4h51_A 257 VLLAQSFSKNMGLYSERAGTLSLLLK 282 (420)
T ss_dssp CEEEEECTTTSCCGGGCEEEEEEECS
T ss_pred EEEEeccccccccccCceEEEEeccc
Confidence 256678999876553 3777766443
No 234
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.89 E-value=6.4e-13 Score=137.32 Aligned_cols=152 Identities=13% Similarity=0.012 Sum_probs=97.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHH---HHhCCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAA---HWLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~---~~~g~~~~~v~~v~~~~~g~id~ 80 (448)
.++|+++||+||..|+..+|..- ..+.+|......|-+...+. ...|+.. .+..+|.+ |+
T Consensus 158 ~v~~~nSGseA~~~Aik~ar~~t-----------gr~~ii~~~~~yHG~~~~~~sg~~~~g~~~-~~~~~~~~-----d~ 220 (465)
T 2yky_A 158 LVRFTNSGTEANLMALATATAIT-----------GRKTVLAFDGGYHGGLLNFASGHAPTNAPY-HVVLGVYN-----DV 220 (465)
Confidence 36899999999999998876431 12344555566666554433 1112211 23334432 88
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCcc
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRAN 156 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD 156 (448)
++|++++++. +.++++|++....+++|.+.| +++|.++|++||+++++|++|+ +.. ...+.....++ ..|
T Consensus 221 ~~l~~~l~~~---~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~-g~~~a~~~~gv-~pD 294 (465)
T 2yky_A 221 EGTADLLKRH---GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRL-SGGGAQEMLGI-SAD 294 (465)
Confidence 9999999742 135778887776667898777 9999999999999999999999 421 11111111122 256
Q ss_pred EEEECCccccCCCCceEEEEEecc
Q psy14299 157 SVSWNPHKMLGAPLQCSILLIKEK 180 (448)
Q Consensus 157 ~~~~s~hK~l~~P~g~G~l~vr~~ 180 (448)
++ +..|++++...+|+++.+++
T Consensus 295 i~--t~sK~lg~G~piG~v~~~~~ 316 (465)
T 2yky_A 295 LT--TLGKYIGGGMSFGAFGGRRD 316 (465)
Confidence 55 45799987555777766553
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.23 E-value=3.3e-09 Score=109.70 Aligned_cols=167 Identities=16% Similarity=0.143 Sum_probs=97.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCC--------CCCcEEEEecCC-
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGI--------GMDNVIRVKTNE- 74 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~--------~~~~v~~v~~~~- 74 (448)
.++|+++|||||-.|+..+|... ++.|.+ ....+|-.....|-...-+....+. ....+..++.+.
T Consensus 130 ~v~f~~sGsEA~e~AiKlAr~~~----~~~g~~-~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~ 204 (473)
T 4e3q_A 130 RVFYTNSGSEANDTMVKMLWFLH----AAEGKP-QKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHY 204 (473)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH----HHTTCT-TCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCH
T ss_pred EEEEeCchHHHHHHHHHHHHHHH----HhcCCC-CcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcc
Confidence 47899999999999999988642 122322 1223444556667655555554432 111244444321
Q ss_pred -----CCCc-------CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC----HHHHHHHHHHcCCEEEEecccccc
Q psy14299 75 -----RGQM-------ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGS 138 (448)
Q Consensus 75 -----~g~i-------d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~ 138 (448)
.+.. ..+++++.+.+. ....+.+|++.-.-...|.+.| +++|.++|++||+++++|+.+.+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGf 282 (473)
T 4e3q_A 205 WRYGEEGETEEQFVARLARELEETIQRE--GADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGF 282 (473)
T ss_dssp HHHSCTTCCHHHHHHHHHHHHHHHHHHH--CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSS
T ss_pred cccccccchhhHHHHHHHHHHHHHHHhh--CCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccC
Confidence 1111 123455555432 1123555666666666676654 899999999999999999988764
Q ss_pred cccccchhhhhcCCCCccEEEECCccccCCC-CceEEEEEecc
Q psy14299 139 LIFSEKYSFVLKGINRANSVSWNPHKMLGAP-LQCSILLIKEK 180 (448)
Q Consensus 139 ~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~vr~~ 180 (448)
--...-+.....++ ..|++++ -|.+++- ...|.+.++++
T Consensus 283 GRtG~~fa~e~~gv-~PDi~t~--~K~l~gG~~Pl~av~~~~~ 322 (473)
T 4e3q_A 283 GRTGNTWGCVTYDF-TPDAIIS--SKNLTAGFFPMGAVILGPE 322 (473)
T ss_dssp STTSSSCHHHHTTC-CCSEEEE--CGGGGTTSSCCEEEEECHH
T ss_pred CcccchhHHHhcCC-CCChHHh--cccccCCCCCcccccccHH
Confidence 22111111112233 3688876 5876554 56788878665
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.03 E-value=7.9e-09 Score=113.82 Aligned_cols=171 Identities=11% Similarity=0.058 Sum_probs=95.6
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCC-------CCCeEEEecCCCchHHHHHHHHhCCCCC-----------
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSH-------LPPLCMFTSEDSHYSMLKAAHWLGIGMD----------- 65 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~-------~~~~~Vl~~~~~H~s~~~~~~~~g~~~~----------- 65 (448)
.++|+++||+||-.|+..+++++. .+.|.+. ....+|......|-+...++...|....
T Consensus 444 ~vff~~SGSeA~E~AlK~A~r~~~---~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~ 520 (831)
T 4a0g_A 444 RVYFSDNGSTAIEIALKMAFRKFC---VDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTG 520 (831)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHH---HTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCC
T ss_pred EEEECCChhHHHHHHHHHHHHHHH---hhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccC
Confidence 589999999999999999843221 1122210 1224566677888888887776653100
Q ss_pred --------------cEEEEecCCCCC--------c-C------------------HHHHHHHHHHhh--hcCCCcEEEEE
Q psy14299 66 --------------NVIRVKTNERGQ--------M-I------------------CSFLEQTIQTSL--AEKKIPLFVNA 102 (448)
Q Consensus 66 --------------~v~~v~~~~~g~--------i-d------------------~e~Le~~l~~~~--~~~~~~~lVv~ 102 (448)
.+..++.....+ . + .++|++.|++.. ..+.++.+|++
T Consensus 521 ~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~ 600 (831)
T 4a0g_A 521 RGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALII 600 (831)
T ss_dssp CEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEE
T ss_pred CccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEE
Confidence 011122221100 0 1 256777775321 11224555665
Q ss_pred ecc-CCccccccC----HHHHHHHHHHcCCEEEEecccccccccccchhhhhcCCCCccEEEECCccccCCC-CceEEEE
Q psy14299 103 TAG-TTVLGAFDP----LDEIATVCEKYDLWMHVDACWGGSLIFSEKYSFVLKGINRANSVSWNPHKMLGAP-LQCSILL 176 (448)
Q Consensus 103 ~~~-~t~tG~~~~----l~~I~~ia~~~g~~l~VD~A~~~~~~~~~~~~~~~~~~~~aD~~~~s~hK~l~~P-~g~G~l~ 176 (448)
.-. ....|.+.+ +++|.++|++||+++++|+++.+.-.....+.....++ ..|+++ ..|.+++- ...|+++
T Consensus 601 Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDiit--lsK~L~gG~~Plgav~ 677 (831)
T 4a0g_A 601 EPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGC-KPDIAC--FAKLLTGGMVPLAVTL 677 (831)
T ss_dssp CCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSS-CCSEEE--ECGGGGTTSSCCEEEE
T ss_pred ecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCC-CCcEEE--EecccccCccCcEEEE
Confidence 553 455676655 99999999999999999998764211111111111233 368776 56888653 2467877
Q ss_pred Eecc
Q psy14299 177 IKEK 180 (448)
Q Consensus 177 vr~~ 180 (448)
++++
T Consensus 678 ~~~~ 681 (831)
T 4a0g_A 678 ATDA 681 (831)
T ss_dssp ECHH
T ss_pred ECHH
Confidence 7664
No 237
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=57.27 E-value=39 Score=31.35 Aligned_cols=92 Identities=11% Similarity=0.019 Sum_probs=49.3
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
.-+++++||+-++=.++...... + .-.+++++.. -....+.++-+|. +...+..| .-|.++
T Consensus 29 gKvalVTGas~GIG~aiA~~la~-------~-----Ga~V~i~~r~-~~~l~~~~~~~g~---~~~~~~~D---v~~~~~ 89 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVA-------E-----GARVFITGRR-KDVLDAAIAEIGG---GAVGIQAD---SANLAE 89 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHH-------T-----TCEEEEEESC-HHHHHHHHHHHCT---TCEEEECC---TTCHHH
T ss_pred CCEEEEeCcCCHHHHHHHHHHHH-------C-----CCEEEEEECC-HHHHHHHHHHcCC---CeEEEEec---CCCHHH
Confidence 44667777776654443322222 1 2234555543 3345555555554 45566654 236777
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCcccccc
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAFD 113 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~ 113 (448)
+++.+++..++..+.-+++-+++....+.+.
T Consensus 90 v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~ 120 (273)
T 4fgs_A 90 LDRLYEKVKAEAGRIDVLFVNAGGGSMLPLG 120 (273)
T ss_dssp HHHHHHHHHHHHSCEEEEEECCCCCCCCCTT
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChh
Confidence 7777766544434556666666666555443
No 238
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=56.84 E-value=52 Score=28.78 Aligned_cols=66 Identities=14% Similarity=0.089 Sum_probs=37.9
Q ss_pred EEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHH
Q psy14299 42 CMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATV 121 (448)
Q Consensus 42 ~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~i 121 (448)
.++.-...-......+.++++ ++...... +.++++..+++..++|.. +|+-.. . .+++
T Consensus 98 avvg~~~~~~~~~~~~~ll~~---~i~~~~~~-----~~~e~~~~i~~l~~~G~~--vvVG~~--~----------~~~~ 155 (196)
T 2q5c_A 98 ALIAYKHSIVDKHEIEAMLGV---KIKEFLFS-----SEDEITTLISKVKTENIK--IVVSGK--T----------VTDE 155 (196)
T ss_dssp EEEEESSCSSCHHHHHHHHTC---EEEEEEEC-----SGGGHHHHHHHHHHTTCC--EEEECH--H----------HHHH
T ss_pred EEEeCcchhhHHHHHHHHhCC---ceEEEEeC-----CHHHHHHHHHHHHHCCCe--EEECCH--H----------HHHH
Confidence 344444555566677777777 56666554 566666677665555522 333211 1 3677
Q ss_pred HHHcCCEE
Q psy14299 122 CEKYDLWM 129 (448)
Q Consensus 122 a~~~g~~l 129 (448)
|+++|+.-
T Consensus 156 A~~~Gl~~ 163 (196)
T 2q5c_A 156 AIKQGLYG 163 (196)
T ss_dssp HHHTTCEE
T ss_pred HHHcCCcE
Confidence 78887763
No 239
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=56.84 E-value=72 Score=28.70 Aligned_cols=69 Identities=9% Similarity=-0.008 Sum_probs=46.9
Q ss_pred CCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHH
Q psy14299 39 PPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEI 118 (448)
Q Consensus 39 ~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I 118 (448)
++..++.-...-..+...+.++++ ++...... +.++++..+++..++|.. +|+... . .
T Consensus 107 ~kIavVg~~~~~~~~~~i~~ll~~---~i~~~~~~-----~~ee~~~~i~~l~~~G~~--vVVG~~--~----------~ 164 (225)
T 2pju_A 107 SSIGVVTYQETIPALVAFQKTFNL---RLDQRSYI-----TEEDARGQINELKANGTE--AVVGAG--L----------I 164 (225)
T ss_dssp SCEEEEEESSCCHHHHHHHHHHTC---CEEEEEES-----SHHHHHHHHHHHHHTTCC--EEEESH--H----------H
T ss_pred CcEEEEeCchhhhHHHHHHHHhCC---ceEEEEeC-----CHHHHHHHHHHHHHCCCC--EEECCH--H----------H
Confidence 344455556666677788889998 56666665 788889998887776632 333311 1 3
Q ss_pred HHHHHHcCCEE
Q psy14299 119 ATVCEKYDLWM 129 (448)
Q Consensus 119 ~~ia~~~g~~l 129 (448)
+++|+++|+.-
T Consensus 165 ~~~A~~~Gl~~ 175 (225)
T 2pju_A 165 TDLAEEAGMTG 175 (225)
T ss_dssp HHHHHHTTSEE
T ss_pred HHHHHHcCCcE
Confidence 78899999873
No 240
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=50.07 E-value=64 Score=29.52 Aligned_cols=92 Identities=11% Similarity=-0.040 Sum_probs=53.4
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHH---hCCCCCcEEEEecCCCCCcC
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHW---LGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~---~g~~~~~v~~v~~~~~g~id 79 (448)
.-.++++||+-++=.++...... + .-.+++++. ......+.++. .|. ++..+..| .-|
T Consensus 9 gKvalVTGas~GIG~aia~~la~-------~-----Ga~Vvi~~~-~~~~~~~~~~~l~~~g~---~~~~~~~D---v~~ 69 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAA-------A-----GARVILNDI-RATLLAESVDTLTRKGY---DAHGVAFD---VTD 69 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHH-------T-----TCEEEECCS-CHHHHHHHHHHHHHTTC---CEEECCCC---TTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHH-------C-----CCEEEEEEC-CHHHHHHHHHHHHhcCC---cEEEEEee---CCC
Confidence 45688889987765554333322 1 223455443 33344444332 233 56666654 237
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCcccccc
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFD 113 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~ 113 (448)
.+++++.+++..++..+.-+++-+++....+.+.
T Consensus 70 ~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~ 103 (255)
T 4g81_D 70 ELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMV 103 (255)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGG
T ss_pred HHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChh
Confidence 8888888887666655667777777766666543
No 241
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=47.91 E-value=1.9e+02 Score=27.59 Aligned_cols=85 Identities=9% Similarity=0.133 Sum_probs=49.1
Q ss_pred CeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH-HHHHHHh--hhcCCCcEEEEEeccCCccc------
Q psy14299 40 PLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL-EQTIQTS--LAEKKIPLFVNATAGTTVLG------ 110 (448)
Q Consensus 40 ~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L-e~~l~~~--~~~~~~~~lVv~~~~~t~tG------ 110 (448)
+.++|++...-..- .-++.+|+...++.....+ +.+++ ...++.. .+ ...|.+|++.+..+..-
T Consensus 59 ~~vlyId~E~s~~~-~ra~~lGvd~d~llv~~~~-----~~E~~~l~i~~~l~~i~-~~~~~lvVIDSI~aL~~~~eieg 131 (333)
T 3io5_A 59 AVCLFYDSEFGITP-AYLRSMGVDPERVIHTPVQ-----SLEQLRIDMVNQLDAIE-RGEKVVVFIDSLGNLASKKETED 131 (333)
T ss_dssp CEEEEEESSCCCCH-HHHHHTTCCGGGEEEEECS-----BHHHHHHHHHHHHHTCC-TTCCEEEEEECSTTCBCC-----
T ss_pred ceEEEEeccchhhH-HHHHHhCCCHHHeEEEcCC-----CHHHHHHHHHHHHHHhh-ccCceEEEEecccccccchhccC
Confidence 45677774332333 3466778876667666543 55555 3333322 11 23688999998877642
Q ss_pred cccC---------------HHHHHHHHHHcCCEEEE
Q psy14299 111 AFDP---------------LDEIATVCEKYDLWMHV 131 (448)
Q Consensus 111 ~~~~---------------l~~I~~ia~~~g~~l~V 131 (448)
...+ +.+|..+++++|+.+++
T Consensus 132 ~~gd~~~gsv~qaR~~s~~LrkL~~~ak~~~i~vi~ 167 (333)
T 3io5_A 132 ALNEKVVSDMTRAKTMKSLFRIVTPYFSTKNIPCIA 167 (333)
T ss_dssp ---------CTHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred ccccccccHHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 1111 44566678999998654
No 242
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=46.81 E-value=33 Score=30.50 Aligned_cols=64 Identities=14% Similarity=0.006 Sum_probs=43.7
Q ss_pred EEEEecCCCCCc-CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEE
Q psy14299 67 VIRVKTNERGQM-ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMH 130 (448)
Q Consensus 67 v~~v~~~~~g~i-d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~ 130 (448)
+.++...++|.+ -.-+-|..++-..-.|..|..|++.-..+..|.....+++.+++++||+.++
T Consensus 129 vfPL~A~~gGvl~R~GHTEAavdLarLAGl~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~ii 193 (204)
T 1tks_A 129 ILPLRAVPGLLKKRRGHTEAAVQLSTLAGLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKII 193 (204)
T ss_dssp EEEEEECTTGGGTCCCHHHHHHHHHHHTTSCSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEE
T ss_pred cceeeecCCCCccCCCcHHHHHHHHHHcCCCceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEE
Confidence 455555555543 2222333343333356678888888776778999999999999999999875
No 243
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=43.67 E-value=1.1e+02 Score=27.78 Aligned_cols=88 Identities=9% Similarity=0.154 Sum_probs=57.0
Q ss_pred EEecCCCch-HHHHHHHHhCCCCCcEEEEecCCC-------------CCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCc
Q psy14299 43 MFTSEDSHY-SMLKAAHWLGIGMDNVIRVKTNER-------------GQMICSFLEQTIQTSLAEKKIPLFVNATAGTTV 108 (448)
Q Consensus 43 Vl~~~~~H~-s~~~~~~~~g~~~~~v~~v~~~~~-------------g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~ 108 (448)
-+.+...|. .+.+.++..|.. -+..+|..+. -.++.+++++.|+...++-+....|.=-.++-.
T Consensus 33 Ai~P~~p~~~~~a~~A~~~G~E--vllHlPMep~~~~~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~ 110 (245)
T 2nly_A 33 AVMPFLEHSTKQAEIAQAAGLE--VIVHMPLEPKKGKISWLGPSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNHMGSKI 110 (245)
T ss_dssp EECSSSTTHHHHHHHHHHTTCE--EEEEEEECCC--------CCCBCTTCCHHHHHHHHHHHHHHSTTCCEEEEEECTTG
T ss_pred EECCCCCCHHHHHHHHHHCCCE--EEEEcCCCCCCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHCCCcEEEecccccch
Confidence 444554454 355666666652 3555665331 157889999999887665444444444457777
Q ss_pred cccccCHHHHHHHHHHcCCEEEEec
Q psy14299 109 LGAFDPLDEIATVCEKYDLWMHVDA 133 (448)
Q Consensus 109 tG~~~~l~~I~~ia~~~g~~l~VD~ 133 (448)
|......+.+.+.++++| +++||.
T Consensus 111 T~~~~~m~~vm~~l~~~g-L~fvDS 134 (245)
T 2nly_A 111 VENEKIMRAILEVVKEKN-AFIIDS 134 (245)
T ss_dssp GGCHHHHHHHHHHHHHTT-CEEEEC
T ss_pred hcCHHHHHHHHHHHHHCC-CEEEcC
Confidence 777888999999999999 555664
No 244
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=43.66 E-value=1.2e+02 Score=27.46 Aligned_cols=91 Identities=16% Similarity=0.045 Sum_probs=45.9
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
...++++||+-++=.++...... + ...+++++. ......+.++..+. ++..+..| .-|.+.
T Consensus 27 gk~vlVTGas~gIG~aia~~la~-------~-----G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~D---v~d~~~ 87 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFHA-------Q-----GAIVGLHGT-REDKLKEIAADLGK---DVFVFSAN---LSDRKS 87 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHH-------T-----TCEEEEEES-CHHHHHHHHHHHCS---SEEEEECC---TTSHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHH-------C-----CCEEEEEeC-CHHHHHHHHHHhCC---ceEEEEee---cCCHHH
Confidence 34677888886654433222221 1 123444443 33344455555554 56666655 236777
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccc
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAF 112 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~ 112 (448)
+++++++..+...+..+++-+.+....+.+
T Consensus 88 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 117 (266)
T 3grp_A 88 IKQLAEVAEREMEGIDILVNNAGITRDGLF 117 (266)
T ss_dssp HHHHHHHHHHHHTSCCEEEECCCCC-----
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 777776544433345667766665544433
No 245
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=43.22 E-value=1.8e+02 Score=26.09 Aligned_cols=78 Identities=15% Similarity=0.056 Sum_probs=53.6
Q ss_pred EEEecCCCchH-HHHHHHHhCCCCCcEEEEecC--------CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc
Q psy14299 42 CMFTSEDSHYS-MLKAAHWLGIGMDNVIRVKTN--------ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF 112 (448)
Q Consensus 42 ~Vl~~~~~H~s-~~~~~~~~g~~~~~v~~v~~~--------~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~ 112 (448)
+.+.++..+.. +.+..+..+. .+..+|.. ..+.+++++..++++. .+++.++.+|-++..-.-
T Consensus 163 i~~~GDt~~~~~~~~~~~~~~~---Dv~il~~g~~~~~~~~~~~hm~~~ea~~~~~~-----l~~~~vi~~H~~~~~~~~ 234 (264)
T 3rpc_A 163 VYLVGDTVWTSDVEKALLRFDP---NVIIMNTGYAQILGFEDSIIMGTKDIGRMVVR-----KPEAKIIAVHMDTVNHTA 234 (264)
T ss_dssp EEECCSCCSCHHHHHHHHHHCC---SEEEEECSCBCBTTCSSCSSCCHHHHHHHHHH-----CTTSEEEEESCSSSTTBC
T ss_pred EEEECCcCchHHHHHHHHHhCC---CEEEEecCccccccccCCcccCHHHHHHHHHh-----CCcCeEEEEccccccccc
Confidence 34444555543 4455555565 67778876 3568899988888865 246788899987655455
Q ss_pred cCHHHHHHHHHHcCC
Q psy14299 113 DPLDEIATVCEKYDL 127 (448)
Q Consensus 113 ~~l~~I~~ia~~~g~ 127 (448)
.+.+++.+.+++.|+
T Consensus 235 ~~~~~l~~~~~~~g~ 249 (264)
T 3rpc_A 235 TSRKDVRKFIKGNNI 249 (264)
T ss_dssp SCHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHcCC
Confidence 778899999888775
No 246
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=43.07 E-value=12 Score=37.42 Aligned_cols=30 Identities=27% Similarity=0.324 Sum_probs=27.4
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.++..|..++++++++-||++|+.+++|..
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred eCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 456789999999999999999999999984
No 247
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=42.02 E-value=2.1e+02 Score=26.38 Aligned_cols=57 Identities=7% Similarity=0.040 Sum_probs=34.6
Q ss_pred CcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccc-ccCHHHHHHHHHHcCCEEEEecc
Q psy14299 77 QMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA-FDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 77 ~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~-~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.++++++++.++...+.-....++.++. +.+.+. .+-+.++.+.++++|+.+++|-.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~v~~~g-~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 171 (320)
T 3ie7_A 114 TVSQTNKDNLLKQIAKKVKKEDMVVIAG-SPPPHYTLSDFKELLRTVKATGAFLGCDNS 171 (320)
T ss_dssp CCCHHHHHHHHHHHHHHCCTTCEEEEES-CCCTTCCHHHHHHHHHHHHHHTCEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHhcCCCEEEEeC-CCCCCCCHHHHHHHHHHHHhcCCEEEEECC
Confidence 4677777765543222222345666643 332222 23467888899999999999974
No 248
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=40.83 E-value=27 Score=33.02 Aligned_cols=61 Identities=10% Similarity=-0.025 Sum_probs=38.4
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+.|-.-.++.-+.++..+=..++-.++.+.+.+. .+++++
T Consensus 26 Pf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 26 PFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 5567899999999999998776663322222233333333445566677776664 467766
No 249
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=40.66 E-value=26 Score=33.26 Aligned_cols=61 Identities=10% Similarity=-0.005 Sum_probs=40.9
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+.|-.-.++.-+.++..+=..++-.++.+.+.+. .+++++
T Consensus 19 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 82 (309)
T 3fkr_A 19 TFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIV 82 (309)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 5667999999999999998777664433333344444444556667777777664 356654
No 250
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=39.13 E-value=1.3e+02 Score=27.42 Aligned_cols=91 Identities=11% Similarity=0.081 Sum_probs=48.1
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
...++++||+-++=.++...... + ...+++++. ......+.....+. ++..++.| .-|.+.
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~~-------~-----G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~D---v~d~~~ 87 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFAK-------N-----GAYVVVADV-NEDAAVRVANEIGS---KAFGVRVD---VSSAKD 87 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-------T-----TCEEEEEES-SHHHHHHHHHHHCT---TEEEEECC---TTCHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-------C-----CCEEEEEeC-CHHHHHHHHHHhCC---ceEEEEec---CCCHHH
Confidence 34577778876654443322221 1 223455543 33344444444444 46666654 236778
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccccc
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGAF 112 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~ 112 (448)
+++++++..+...+..+++-+++....+.+
T Consensus 88 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 117 (277)
T 4dqx_A 88 AESMVEKTTAKWGRVDVLVNNAGFGTTGNV 117 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence 877776544433345677777766555543
No 251
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=38.92 E-value=29 Score=32.91 Aligned_cols=61 Identities=11% Similarity=-0.030 Sum_probs=39.6
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc--CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY--DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~--g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+.|-.-.++.-+.++..+=..+.-.++.+.+.+. .+++++
T Consensus 19 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 19 PFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 4567899999999999998777663322222333443333455566777777665 477776
No 252
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=38.47 E-value=1.1e+02 Score=27.21 Aligned_cols=91 Identities=11% Similarity=-0.066 Sum_probs=48.8
Q ss_pred CccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 2 NLKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 2 ~~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
....++++||+-++=.++...... + ...+++++. ......+.+...+. ++..+..| .-|.+
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~-------~-----G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~D---v~~~~ 65 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAA-------D-----GATVIVSDI-NAEGAKAAAASIGK---KARAIAAD---ISDPG 65 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-------T-----TCEEEEECS-CHHHHHHHHHHHCT---TEEECCCC---TTCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-------C-----CCEEEEEeC-CHHHHHHHHHHhCC---ceEEEEcC---CCCHH
Confidence 345677788886654443222221 1 223444443 33445555554554 56666654 23778
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCcccc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGA 111 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~ 111 (448)
.+++.+++..+...+..+++-+.+....+.
T Consensus 66 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 95 (247)
T 3rwb_A 66 SVKALFAEIQALTGGIDILVNNASIVPFVA 95 (247)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCCCCCCC
T ss_pred HHHHHHHHHHHHCCCCCEEEECCCCCCCCC
Confidence 888877764443334557777776655443
No 253
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=38.44 E-value=33 Score=32.49 Aligned_cols=61 Identities=8% Similarity=-0.018 Sum_probs=39.8
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+.|-.-.++.-+.++..+=..++-+++.+.+.+. .+++++
T Consensus 25 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 25 PFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp CBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 5567899999999999988766653322233333444444556667788887775 466665
No 254
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=37.25 E-value=34 Score=32.33 Aligned_cols=59 Identities=5% Similarity=0.098 Sum_probs=37.0
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEE--eccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNA--TAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~--~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+.|-. .+++ +.++..+=..+.-.++.+.+.+. .+++++
T Consensus 22 PF~~dg~iD~~~l~~lv~~li~~Gv~--Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 22 PFDQQQALDKASLRRLVQFNIQQGID--GLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCS--EEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCC--EEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 45678999999999999887666533 3333 22333333344556666766653 467765
No 255
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=37.18 E-value=29 Score=32.61 Aligned_cols=61 Identities=11% Similarity=0.092 Sum_probs=37.5
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+.|-.-.++.-+.++..+=..++-.++.+.+.+. .+++++
T Consensus 18 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 18 PMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4567899999999999988766653322222233333333445556677766653 467766
No 256
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=36.95 E-value=36 Score=32.14 Aligned_cols=59 Identities=8% Similarity=-0.069 Sum_probs=36.9
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEE--eccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNA--TAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~--~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+.|-. .+++ +.++..+=..+.-.++.+.+.+. .+++++
T Consensus 27 Pf~~dg~iD~~~l~~lv~~li~~Gv~--gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 90 (304)
T 3cpr_A 27 PFTESGDIDIAAGREVAAYLVDKGLD--SLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIA 90 (304)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCC--EEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCC--EEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEe
Confidence 45678999999999999987666533 3333 33333333445556677766653 366653
No 257
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=36.77 E-value=1.1e+02 Score=27.04 Aligned_cols=92 Identities=14% Similarity=0.159 Sum_probs=47.4
Q ss_pred CCccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCH
Q psy14299 1 MNLKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 1 ~~~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~ 80 (448)
|....++++||+-++=.++...... + ...++++++.. ....+.....+. .+..+..|- -|.
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~-------~-----G~~V~~~~r~~-~~~~~~~~~~~~---~~~~~~~D~---~~~ 61 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVE-------R-----GHQVSMMGRRY-QRLQQQELLLGN---AVIGIVADL---AHH 61 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHH-------T-----TCEEEEEESCH-HHHHHHHHHHGG---GEEEEECCT---TSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH-------C-----CCEEEEEECCH-HHHHHHHHHhcC---CceEEECCC---CCH
Confidence 4455678888887654444322222 1 23355555543 334444444443 466666542 277
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCcccc
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGA 111 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~ 111 (448)
+.+++.+++..+...+..+++-+.+....+.
T Consensus 62 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~ 92 (235)
T 3l6e_A 62 EDVDVAFAAAVEWGGLPELVLHCAGTGEFGP 92 (235)
T ss_dssp HHHHHHHHHHHHHHCSCSEEEEECCCC----
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCCCCCCCC
Confidence 8888877764443335567777776654443
No 258
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=36.66 E-value=35 Score=31.96 Aligned_cols=61 Identities=20% Similarity=0.228 Sum_probs=37.4
Q ss_pred ecCCCCCcCHHHHHHHHHHhhh-cCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLA-EKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~-~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+ .|-.-.++.-+.++..+=..+.-.++.+.+.+. .+++++
T Consensus 14 Pf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (293)
T 1f6k_A 14 SFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIA 78 (293)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 4567899999999999998777 653322222233333333445566677766653 366653
No 259
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=36.53 E-value=1.7e+02 Score=26.03 Aligned_cols=93 Identities=10% Similarity=0.002 Sum_probs=48.1
Q ss_pred CccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 2 NLKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 2 ~~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
....++++||+-++=.++...... + ...++++++.. ....+..........++..+..| .-|.+
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~-------~-----G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D---v~~~~ 68 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAK-------E-----GARVVITGRTK-EKLEEAKLEIEQFPGQILTVQMD---VRNTD 68 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHH-------T-----TCEEEEEESCH-HHHHHHHHHHCCSTTCEEEEECC---TTCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-------C-----CCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEcc---CCCHH
Confidence 445678888887654443322222 1 22355555433 33444444332212246666655 23677
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLG 110 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG 110 (448)
++++++++..+...+..+++-+.+....+
T Consensus 69 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 97 (257)
T 3imf_A 69 DIQKMIEQIDEKFGRIDILINNAAGNFIC 97 (257)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 88887776444333455677666654444
No 260
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=35.67 E-value=17 Score=36.20 Aligned_cols=30 Identities=13% Similarity=0.098 Sum_probs=26.9
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.....|..++++++++-||++|+.+++|..
T Consensus 57 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 57 LQSRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 455679999999999999999999999974
No 261
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=35.23 E-value=31 Score=32.81 Aligned_cols=61 Identities=10% Similarity=0.074 Sum_probs=38.3
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+.|-.-.++.-+.++..+=..++-+++.+.+.+. .+++++
T Consensus 34 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 97 (314)
T 3qze_A 34 PFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIA 97 (314)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4567899999999999988766663322222233443333455566677766554 366766
No 262
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=34.81 E-value=31 Score=32.32 Aligned_cols=59 Identities=10% Similarity=0.064 Sum_probs=37.2
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEE--eccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNA--TAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~--~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+.|-. .+++ +.++..+=..++-.++.+.+.+. .+++++
T Consensus 12 Pf~~dg~iD~~~l~~lv~~li~~Gv~--gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 12 PMLKDGGVDWKSLEKLVEWHIEQGTN--SIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHHTCC--EEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHCCCC--EEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 55678999999999999887666633 3332 22333232445556677766653 466665
No 263
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=34.78 E-value=1.4e+02 Score=27.19 Aligned_cols=89 Identities=11% Similarity=-0.014 Sum_probs=44.9
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++++||+-++=.++...... + ...+++++. ......+.+...+. ++..+..| .-|.+.+
T Consensus 30 k~vlVTGas~gIG~aia~~la~-------~-----G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~D---v~d~~~v 90 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLAD-------E-----GCHVLCADI-DGDAADAAATKIGC---GAAACRVD---VSDEQQI 90 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHH-------T-----TCEEEEEES-SHHHHHHHHHHHCS---SCEEEECC---TTCHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHH-------C-----CCEEEEEeC-CHHHHHHHHHHcCC---cceEEEec---CCCHHHH
Confidence 4577777776543333222221 1 123444443 33344444444444 45555554 2267777
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCcccc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGA 111 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~ 111 (448)
++.+++..+...++.+++-+.+....+.
T Consensus 91 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~ 118 (277)
T 3gvc_A 91 IAMVDACVAAFGGVDKLVANAGVVHLAS 118 (277)
T ss_dssp HHHHHHHHHHHSSCCEEEECCCCCCCBC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 7777654443334556666666554443
No 264
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=34.38 E-value=1.7e+02 Score=26.05 Aligned_cols=89 Identities=13% Similarity=0.031 Sum_probs=47.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++++||+-++=.++...... + ...+++++. ......+.....+. ++..+..| .-|.+.+
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~-------~-----G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~D---~~~~~~v 69 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVR-------E-----GATVAIADI-DIERARQAAAEIGP---AAYAVQMD---VTRQDSI 69 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHH-------T-----TCEEEEEES-CHHHHHHHHHHHCT---TEEEEECC---TTCHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHH-------C-----CCEEEEEeC-CHHHHHHHHHHhCC---CceEEEee---CCCHHHH
Confidence 4567777776653333222221 1 223455543 33344445444444 45566654 2377888
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCcccc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGA 111 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~ 111 (448)
++.+++..++..++.+++-+.+....+.
T Consensus 70 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~ 97 (259)
T 4e6p_A 70 DAAIAATVEHAGGLDILVNNAALFDLAP 97 (259)
T ss_dssp HHHHHHHHHHSSSCCEEEECCCCCCCBC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence 8888765444445667777776654443
No 265
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=34.31 E-value=20 Score=36.04 Aligned_cols=30 Identities=13% Similarity=0.052 Sum_probs=26.8
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.....|..++++++++-||++|+.+++|..
T Consensus 71 id~~~Gt~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 71 VRTKYGTKSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 445679999999999999999999999985
No 266
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=33.87 E-value=36 Score=32.07 Aligned_cols=58 Identities=7% Similarity=-0.047 Sum_probs=35.8
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc---cccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG---AFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG---~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+.|- ..+++ .++|--+ ..+.-.++.+.+.+. .+++++
T Consensus 23 Pf~~dg~iD~~~l~~lv~~li~~Gv--~gl~v-~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 86 (301)
T 1xky_A 23 PFDINGNIDFAKTTKLVNYLIDNGT--TAIVV-GGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIA 86 (301)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTC--CEEEE-SSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCC--CEEEE-CccccChhhCCHHHHHHHHHHHHHHhCCCceEEe
Confidence 4457899999999999987766653 33333 3333333 334455666666553 356553
No 267
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=33.46 E-value=1.2e+02 Score=22.27 Aligned_cols=48 Identities=19% Similarity=0.174 Sum_probs=35.2
Q ss_pred hhhhhhHHHHHHHHhCCcEEEEeeecCCcccccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHhH
Q psy14299 373 TLSKVAPRIKEKLVLGGTLMIGYQPLQHRNLHNFFRLVTTCHPASSRQDMDYAIDQIELRGAEVD 437 (448)
Q Consensus 373 ~~~~~~~~i~~~L~~~g~~~~~~~~~~g~~~~~~lRis~~~~~~~t~edid~l~~al~~~~~~~~ 437 (448)
++.++..++.+.+.+.| . ..+|+|++ ..|+.+.+.+...|-++..+++
T Consensus 28 elqkvlnelmdyikkqg----------a----krvrisit---artkkeaekfaailikvfaelg 75 (106)
T 1qys_A 28 ELQKVLNELMDYIKKQG----------A----KRVRISIT---ARTKKEAEKFAAILIKVFAELG 75 (106)
T ss_dssp HHHHHHHHHHHHHHHHC----------C----SEEEEEEE---CSSHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcC----------C----cEEEEEEE---ecchhHHHHHHHHHHHHHHHhC
Confidence 34444456777777776 1 58999996 5788899999988888877654
No 268
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=33.26 E-value=34 Score=32.05 Aligned_cols=59 Identities=14% Similarity=0.165 Sum_probs=36.0
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEE--eccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNA--TAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~--~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+.|-. .+++ +.++..+=..+.-.++.+.+.+. .+++++
T Consensus 12 Pf~~dg~iD~~~l~~lv~~li~~Gv~--gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (292)
T 2ojp_A 12 PMDEKGNVCRASLKKLIDYHVASGTS--AIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIA 75 (292)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHHTCC--EEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCC--EEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 45678999999999999877666533 3333 22333333344556666766653 356553
No 269
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=33.24 E-value=22 Score=35.73 Aligned_cols=30 Identities=17% Similarity=0.083 Sum_probs=26.6
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.....|..++++++++-||++|+.+++|..
T Consensus 73 idp~~Gt~~df~~lv~~aH~~Gi~VilD~V 102 (480)
T 1ud2_A 73 VRTKYGTKAQLERAIGSLKSNDINVYGDVV 102 (480)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 345578999999999999999999999985
No 270
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=33.19 E-value=1.4e+02 Score=26.59 Aligned_cols=89 Identities=10% Similarity=0.041 Sum_probs=47.1
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++++||+-++=.++...... + ...++++++. .....+..+..+. ++..+..| .-|.+.+
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~-------~-----G~~V~~~~r~-~~~~~~~~~~~~~---~~~~~~~D---v~~~~~v 69 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVE-------G-----GAEVLLTGRN-ESNIARIREEFGP---RVHALRSD---IADLNEI 69 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHH-------T-----TCEEEEEESC-HHHHHHHHHHHGG---GEEEEECC---TTCHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHH-------C-----CCEEEEEeCC-HHHHHHHHHHhCC---cceEEEcc---CCCHHHH
Confidence 4577778776654433222221 1 2234555543 3344555444444 56667665 2377777
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCcccc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGA 111 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~ 111 (448)
++.+++..+...+..+++-+.+....+.
T Consensus 70 ~~~~~~~~~~~g~id~lv~nAg~~~~~~ 97 (255)
T 4eso_A 70 AVLGAAAGQTLGAIDLLHINAGVSELEP 97 (255)
T ss_dssp HHHHHHHHHHHSSEEEEEECCCCCCCBC
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 7777654433335566666666554443
No 271
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=33.05 E-value=38 Score=32.46 Aligned_cols=61 Identities=8% Similarity=-0.016 Sum_probs=36.9
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+.|-.-.++.-+.++..+=..+.-.++.+.+.+. .+++++
T Consensus 45 PF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 108 (332)
T 2r8w_A 45 PADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMA 108 (332)
T ss_dssp CBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4567899999999999987766653322222222333333344556677766654 367765
No 272
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=32.95 E-value=1.3e+02 Score=26.74 Aligned_cols=65 Identities=12% Similarity=0.132 Sum_probs=44.2
Q ss_pred cEEEEecCCCCCc-CHHHHHHHHHHhhhcCCCcEEEEEecc-CCccccccCHHHHHHHHHHcCCEEE
Q psy14299 66 NVIRVKTNERGQM-ICSFLEQTIQTSLAEKKIPLFVNATAG-TTVLGAFDPLDEIATVCEKYDLWMH 130 (448)
Q Consensus 66 ~v~~v~~~~~g~i-d~e~Le~~l~~~~~~~~~~~lVv~~~~-~t~tG~~~~l~~I~~ia~~~g~~l~ 130 (448)
++.++...++|.+ -.-+-|..++-.+-.|..|..|++.-. -+..|.....+++.+++++||+.++
T Consensus 127 HvfPL~A~~gGvl~R~GhTEaavdLarlAGl~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~i 193 (206)
T 3mio_A 127 HVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALI 193 (206)
T ss_dssp EEEEEECCTTGGGTCCCHHHHHHHHHHHTTSCSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEE
T ss_pred CceeEeeCCCCcccCCChHHHHHHHHHHcCCCceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEE
Confidence 3555555555532 223445555544445677878877762 4568999999999999999999875
No 273
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=32.95 E-value=23 Score=35.24 Aligned_cols=30 Identities=17% Similarity=0.237 Sum_probs=26.6
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.....|..++++++++-||++|+.+++|..
T Consensus 79 id~~~Gt~~df~~lv~~~H~~Gi~VilD~V 108 (435)
T 1mxg_A 79 VETRFGSKEELVRLIQTAHAYGIKVIADVV 108 (435)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 345578899999999999999999999985
No 274
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=32.70 E-value=23 Score=36.11 Aligned_cols=30 Identities=10% Similarity=-0.001 Sum_probs=26.7
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.....|..++++++++-||++|+.+++|..
T Consensus 74 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 74 VRTKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 345579999999999999999999999985
No 275
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=32.69 E-value=2.9e+02 Score=25.25 Aligned_cols=43 Identities=21% Similarity=0.028 Sum_probs=22.8
Q ss_pred cEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccc
Q psy14299 66 NVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA 111 (448)
Q Consensus 66 ~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~ 111 (448)
++..+..| .-|.+.+++++++..+...+..+++-+.+....+.
T Consensus 92 ~~~~~~~D---v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~ 134 (293)
T 3rih_A 92 NVIGVRLD---VSDPGSCADAARTVVDAFGALDVVCANAGIFPEAR 134 (293)
T ss_dssp CEEEEECC---TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred cEEEEEEe---CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 45555554 22666776666654333234556666665554443
No 276
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=32.60 E-value=1.7e+02 Score=25.67 Aligned_cols=90 Identities=19% Similarity=0.038 Sum_probs=48.0
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH---HhCCCCCcEEEEecCCCCCcC
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH---WLGIGMDNVIRVKTNERGQMI 79 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~---~~g~~~~~v~~v~~~~~g~id 79 (448)
...++.+||+-++=.++...... +| ..++++++. .....+... ..+. ++..+..| .-|
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~-------~G-----~~v~~~~r~-~~~~~~~~~~~~~~~~---~~~~~~~D---~~~ 65 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALAS-------KG-----ATVVGTATS-QASAEKFENSMKEKGF---KARGLVLN---ISD 65 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHH-------TT-----CEEEEEESS-HHHHHHHHHHHHHTTC---CEEEEECC---TTC
T ss_pred CCEEEEECCCChHHHHHHHHHHH-------CC-----CEEEEEeCC-HHHHHHHHHHHHhcCC---ceEEEEec---CCC
Confidence 34678888886654333222221 12 234555543 223333322 2233 56666655 237
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEEeccCCcccc
Q psy14299 80 CSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA 111 (448)
Q Consensus 80 ~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~ 111 (448)
.+.+++.+++..+...++..++-+.+....+.
T Consensus 66 ~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~ 97 (247)
T 3lyl_A 66 IESIQNFFAEIKAENLAIDILVNNAGITRDNL 97 (247)
T ss_dssp HHHHHHHHHHHHHTTCCCSEEEECCCCCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCc
Confidence 88888888775555445667777776655443
No 277
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=32.39 E-value=23 Score=35.69 Aligned_cols=30 Identities=17% Similarity=0.086 Sum_probs=26.8
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.....|..++++++++-||++|+.+++|..
T Consensus 75 idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 104 (485)
T 1wpc_A 75 VRTKYGTRSQLQAAVTSLKNNGIQVYGDVV 104 (485)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 445679999999999999999999999985
No 278
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=31.98 E-value=24 Score=35.00 Aligned_cols=30 Identities=10% Similarity=0.045 Sum_probs=26.5
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.....|..++++++++-||++|+.+++|..
T Consensus 62 idp~~Gt~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 62 FKAEYGSEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 345578899999999999999999999985
No 279
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=31.95 E-value=41 Score=32.38 Aligned_cols=61 Identities=13% Similarity=-0.002 Sum_probs=37.5
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.++++.+|.+.+++.++...+.|-.-.++.-+.++..+=..+.-.++.+.+.+. .+++++
T Consensus 42 PF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 105 (343)
T 2v9d_A 42 IFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLI 105 (343)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 5567899999999999988777663332222233333333445566677766653 356653
No 280
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=31.62 E-value=32 Score=32.61 Aligned_cols=61 Identities=15% Similarity=0.110 Sum_probs=39.8
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+.|-.-.++.-+.++..+=..++-.++.+.+.+. .+++++
T Consensus 18 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpVia 81 (311)
T 3h5d_A 18 PFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIA 81 (311)
T ss_dssp CBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4567899999999999988777664333333333444344455666777777665 356665
No 281
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=31.41 E-value=1.5e+02 Score=26.78 Aligned_cols=92 Identities=12% Similarity=-0.044 Sum_probs=48.5
Q ss_pred CccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHh---CCCCCcEEEEecCCCCCc
Q psy14299 2 NLKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWL---GIGMDNVIRVKTNERGQM 78 (448)
Q Consensus 2 ~~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~---g~~~~~v~~v~~~~~g~i 78 (448)
....++++||+-++=.++...... + ...++++++. .....+....+ +. ++..+..| .-
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~-------~-----G~~V~~~~r~-~~~~~~~~~~l~~~~~---~~~~~~~D---v~ 63 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGV-------A-----GAKILLGARR-QARIEAIATEIRDAGG---TALAQVLD---VT 63 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH-------T-----TCEEEEEESS-HHHHHHHHHHHHHTTC---EEEEEECC---TT
T ss_pred CCCEEEEeCCccHHHHHHHHHHHH-------C-----CCEEEEEECC-HHHHHHHHHHHHhcCC---cEEEEEcC---CC
Confidence 345678888887654444322222 1 2234555543 33344433322 33 46666654 23
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF 112 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~ 112 (448)
|.+.+++.+++..+...+..+++-+.+....+.+
T Consensus 64 d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~ 97 (264)
T 3tfo_A 64 DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPL 97 (264)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 6778888776544433356677777766555533
No 282
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=30.97 E-value=52 Score=30.15 Aligned_cols=23 Identities=13% Similarity=0.366 Sum_probs=19.6
Q ss_pred cccCHHHHHHHHHHcCCEEEEec
Q psy14299 111 AFDPLDEIATVCEKYDLWMHVDA 133 (448)
Q Consensus 111 ~~~~l~~I~~ia~~~g~~l~VD~ 133 (448)
.+..++++.++|+++|+.+++|-
T Consensus 88 ~~~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 88 MLDDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEe
Confidence 34568999999999999998875
No 283
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=30.90 E-value=48 Score=32.20 Aligned_cols=59 Identities=10% Similarity=-0.006 Sum_probs=37.2
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEE--eccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNA--TAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~--~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+.| ...+++ +.++..+=..++-.++.+.+.+. .+++++
T Consensus 70 PF~~dg~ID~~al~~lv~~li~~G--v~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 70 PYLPDGRFDLEAYDDLVNIQIQNG--AEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTT--CCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcC--CCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 456789999999999998876665 334443 33333333445555666666553 467765
No 284
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=30.68 E-value=1.7e+02 Score=25.96 Aligned_cols=90 Identities=18% Similarity=-0.000 Sum_probs=46.2
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
...++++||+-++=.++...... + ...++++++ ......+.....+. ....+..| .-|.++
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~~-------~-----G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~D---v~d~~~ 69 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLAE-------R-----GAKVIGTAT-SESGAQAISDYLGD---NGKGMALN---VTNPES 69 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHH-------T-----TCEEEEEES-SHHHHHHHHHHHGG---GEEEEECC---TTCHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHH-------C-----CCEEEEEeC-CHHHHHHHHHHhcc---cceEEEEe---CCCHHH
Confidence 34677888886654433222221 1 123444443 33344444444443 34555554 237788
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCcccc
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLGA 111 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG~ 111 (448)
+++.+++..+...+..+++-+.+....+.
T Consensus 70 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~ 98 (248)
T 3op4_A 70 IEAVLKAITDEFGGVDILVNNAGITRDNL 98 (248)
T ss_dssp HHHHHHHHHHHHCCCSEEEECCCCCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 88877764443334556766666554443
No 285
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=30.60 E-value=49 Score=31.86 Aligned_cols=61 Identities=11% Similarity=-0.089 Sum_probs=35.3
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~V 131 (448)
|.++++.+|.+.+++.++...+.|-.-.++.-+.++..+=..+.-.++.+.+-...+++++
T Consensus 37 PF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpVia 97 (344)
T 2hmc_A 37 PCRQDRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIV 97 (344)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEE
Confidence 4567899999999999988776653332222333333333334455555553233455553
No 286
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=30.59 E-value=2.3e+02 Score=27.21 Aligned_cols=85 Identities=13% Similarity=0.094 Sum_probs=45.2
Q ss_pred CeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc-c-c-----
Q psy14299 40 PLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG-A-F----- 112 (448)
Q Consensus 40 ~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG-~-~----- 112 (448)
..++|++. +|..-...++.+|+...++.....+ +.+++.+.++...+. ..+.+|++........ . +
T Consensus 103 ~~vlyi~~-E~s~~~~~a~~~g~d~~~l~i~~~~-----~~e~~l~~l~~l~~~-~~~~lVVIDsl~~l~~~~e~~g~~g 175 (366)
T 1xp8_A 103 GTCAFIDA-EHALDPVYARALGVNTDELLVSQPD-----NGEQALEIMELLVRS-GAIDVVVVDSVAALTPRAEIEGDMG 175 (366)
T ss_dssp CCEEEEES-SCCCCHHHHHHTTCCGGGCEEECCS-----SHHHHHHHHHHHHTT-TCCSEEEEECTTTCCCSTTC-----
T ss_pred CeEEEEEC-CCChhHHHHHHcCCCHHHceeecCC-----cHHHHHHHHHHHHhc-CCCCEEEEeChHHhccccccccccc
Confidence 34666663 3322122355667754444443322 556666666543322 2467888888776552 1 0
Q ss_pred ------------cCHHHHHHHHHHcCCEEEE
Q psy14299 113 ------------DPLDEIATVCEKYDLWMHV 131 (448)
Q Consensus 113 ------------~~l~~I~~ia~~~g~~l~V 131 (448)
.-+.++..+++++++.+++
T Consensus 176 d~~~~~~~r~~~~~lr~L~~~a~~~~~~VI~ 206 (366)
T 1xp8_A 176 DSLPGLQARLMSQALRKLTAILSKTGTAAIF 206 (366)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 1134455567888887655
No 287
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=30.49 E-value=24 Score=35.49 Aligned_cols=31 Identities=16% Similarity=0.311 Sum_probs=27.1
Q ss_pred ccCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 104 AGTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 104 ~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
......|..++++++++-||++|+.+++|..
T Consensus 89 ~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 89 SLNENYGTADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp EECTTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3455678899999999999999999999985
No 288
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=30.36 E-value=27 Score=35.49 Aligned_cols=30 Identities=13% Similarity=0.233 Sum_probs=26.3
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
+....|..++++++++-||++|+.|++|..
T Consensus 72 vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 101 (549)
T 4aie_A 72 IDPQYGTMADMDELISKAKEHHIKIVMDLV 101 (549)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 345568889999999999999999999985
No 289
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=30.14 E-value=1.8e+02 Score=26.26 Aligned_cols=42 Identities=10% Similarity=-0.115 Sum_probs=23.9
Q ss_pred cEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc
Q psy14299 66 NVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG 110 (448)
Q Consensus 66 ~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG 110 (448)
++..+..| .-|.+.+++.+++..+...+..+++-+.+....+
T Consensus 76 ~~~~~~~D---v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~ 117 (271)
T 4ibo_A 76 DAEAVAFD---VTSESEIIEAFARLDEQGIDVDILVNNAGIQFRK 117 (271)
T ss_dssp CEEECCCC---TTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCC
T ss_pred ceEEEEcC---CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
Confidence 45555544 2367777777766544444555666666654444
No 290
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=30.10 E-value=3e+02 Score=25.21 Aligned_cols=89 Identities=15% Similarity=0.090 Sum_probs=58.9
Q ss_pred EEEecCCCch-HHHHHHHHhCCCCCcEEEEecCCCC-------------CcCHHHHHHHHHHhhhcCCCcEEEEEeccCC
Q psy14299 42 CMFTSEDSHY-SMLKAAHWLGIGMDNVIRVKTNERG-------------QMICSFLEQTIQTSLAEKKIPLFVNATAGTT 107 (448)
Q Consensus 42 ~Vl~~~~~H~-s~~~~~~~~g~~~~~v~~v~~~~~g-------------~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t 107 (448)
.-+.+...|. .+.+.++..|.. -+..+|..+.+ .++.+++++.|+...++-+....|.=-.++-
T Consensus 59 ~Ai~P~~p~~~~~a~~A~~~G~E--vllHlPMep~~~p~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~ 136 (261)
T 2qv5_A 59 LGFAASGNSLQRWMQDARREGHE--ILLQIPLEPFGYPGTNPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGVMNYLGGR 136 (261)
T ss_dssp EEEETTCSSHHHHHHHHHHHTCC--EEEEEEECCTTTTTSCCCTTCBCTTSCHHHHHHHHHHHHTTCCCCSEEEEEECTT
T ss_pred EEECCCCCCHHHHHHHHHHCCCE--EEEECCCCCCCCCCCCCCcCcCcCCCCHHHHHHHHHHHHHHCCCcEEEecccccc
Confidence 4555655554 466677767653 35666654321 3789999999988766543434444445666
Q ss_pred ccccccCHHHHHHHHHHcCCEEEEec
Q psy14299 108 VLGAFDPLDEIATVCEKYDLWMHVDA 133 (448)
Q Consensus 108 ~tG~~~~l~~I~~ia~~~g~~l~VD~ 133 (448)
.|.....++.+.+.++++|.+++ |.
T Consensus 137 ~T~~~~~M~~vm~~L~~~gL~Fl-DS 161 (261)
T 2qv5_A 137 FLAEQSALEPVMRDIGKRGLLFL-DD 161 (261)
T ss_dssp GGGCHHHHHHHHHHHHHTTCEEE-EC
T ss_pred hhcCHHHHHHHHHHHHHCCCEEE-cC
Confidence 67777889999999999986664 54
No 291
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=29.96 E-value=38 Score=31.75 Aligned_cols=55 Identities=9% Similarity=-0.041 Sum_probs=34.2
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY 125 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~ 125 (448)
|.+++|.+|.+.+++.++...+.|-.-.++.-+.++..+=..+.-.++.+.+.+.
T Consensus 14 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 14 PFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHT
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 4567899999999999988766653322222222333333445566777777664
No 292
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=29.29 E-value=26 Score=34.43 Aligned_cols=28 Identities=11% Similarity=0.058 Sum_probs=25.3
Q ss_pred CccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 107 TVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 107 t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
...|..++++++++-||++|+.+++|..
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4568899999999999999999999974
No 293
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=28.85 E-value=48 Score=31.00 Aligned_cols=60 Identities=13% Similarity=0.053 Sum_probs=35.7
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++| +|.+.+++.++...+.|-.-.++.-+.++..+=..+.-.++.+.+.+. .+++++
T Consensus 13 Pf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~ 75 (291)
T 3a5f_A 13 PFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIA 75 (291)
T ss_dssp CBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 455789 999999999988766653322222233333333445566677766653 356553
No 294
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=28.73 E-value=26 Score=34.77 Aligned_cols=29 Identities=7% Similarity=0.212 Sum_probs=25.5
Q ss_pred CCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 106 TTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 106 ~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
+...|..++++++++-||++|+.+++|..
T Consensus 77 ~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V 105 (449)
T 3dhu_A 77 NPEYGTLADFKALTDRAHELGMKVMLDIV 105 (449)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 44568889999999999999999999985
No 295
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=28.47 E-value=33 Score=32.61 Aligned_cols=61 Identities=13% Similarity=0.031 Sum_probs=38.7
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+.|-.-.++.-+.++..+=..++-.++.+.+.+. .+++++
T Consensus 35 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 98 (315)
T 3na8_A 35 PFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIV 98 (315)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4567899999999999998777663322223333333333455566677777653 366665
No 296
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=28.34 E-value=27 Score=34.61 Aligned_cols=30 Identities=13% Similarity=0.202 Sum_probs=26.6
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.....|..++++++.+-||++|+.+++|..
T Consensus 74 idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V 103 (424)
T 2dh2_A 74 IDPNFGSKEDFDSLLQSAKKKSIRVILDLT 103 (424)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 455578899999999999999999999985
No 297
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=28.30 E-value=1.4e+02 Score=23.80 Aligned_cols=48 Identities=13% Similarity=0.194 Sum_probs=31.8
Q ss_pred CHHHHHHHHHHhhhcC-----CCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEE
Q psy14299 79 ICSFLEQTIQTSLAEK-----KIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMH 130 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~-----~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~ 130 (448)
|++.+.+.|++..++. ..|.++-+.... ...++.+|.++++++|+.++
T Consensus 26 d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 26 EPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred CHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 8888888887655443 133333333222 23689999999999998764
No 298
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=28.18 E-value=1.5e+02 Score=26.61 Aligned_cols=64 Identities=16% Similarity=0.030 Sum_probs=44.3
Q ss_pred cEEEEecCCCCCc-CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEE
Q psy14299 66 NVIRVKTNERGQM-ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMH 130 (448)
Q Consensus 66 ~v~~v~~~~~g~i-d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~ 130 (448)
++.++...++|.+ -.-+-|..++-..-.|..|..|++... +..|.....+++.++|++||+.++
T Consensus 147 HVfPL~A~~gGVl~R~GHTEaaVdLarlAGl~Pa~VicEi~-~ddG~mar~~~l~~fA~~h~l~~i 211 (227)
T 1snn_A 147 SVTLLRAAEGLVKNRQGHTEMTVALAELANLVPITTICEMM-GDDGNAMSKNETKRYAEKHNLIYL 211 (227)
T ss_dssp EEEEEECCTTGGGTCCSHHHHHHHHHHHTTSCSEEEEEEEB-CTTSSBCCHHHHHHHHHHHTCCEE
T ss_pred CceeEEeCCCCEeeCCCchHHHHHHHHHcCCCceEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEE
Confidence 4666666555532 233444444433345677878877776 457999999999999999999875
No 299
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=28.11 E-value=27 Score=35.16 Aligned_cols=29 Identities=7% Similarity=0.212 Sum_probs=25.6
Q ss_pred CCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 106 TTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 106 ~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
....|..++++++++-||++|+.+++|..
T Consensus 75 dp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 75 NPDYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 44568889999999999999999999985
No 300
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=28.10 E-value=1.9e+02 Score=26.18 Aligned_cols=43 Identities=9% Similarity=-0.004 Sum_probs=24.8
Q ss_pred cEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccc
Q psy14299 66 NVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA 111 (448)
Q Consensus 66 ~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~ 111 (448)
++..+..| .-|.+.+++++++..+...+..+++-+.+....+.
T Consensus 74 ~~~~~~~D---v~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 116 (279)
T 3sju_A 74 DVDGSSCD---VTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGE 116 (279)
T ss_dssp CEEEEECC---TTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSC
T ss_pred cEEEEECC---CCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC
Confidence 46666654 23677777777654433334556666666554443
No 301
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=28.06 E-value=1.8e+02 Score=25.82 Aligned_cols=88 Identities=7% Similarity=-0.120 Sum_probs=47.2
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH---HhCCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH---WLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~---~~g~~~~~v~~v~~~~~g~id~ 80 (448)
..++++||+-++=.++...... + ...++++++... ...+... ..+. ++..++.| --|.
T Consensus 8 k~vlVTGas~GIG~aia~~l~~-------~-----G~~V~~~~r~~~-~~~~~~~~~~~~~~---~~~~~~~D---v~~~ 68 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAA-------E-----GFTVFAGRRNGE-KLAPLVAEIEAAGG---RIVARSLD---ARNE 68 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHH-------T-----TCEEEEEESSGG-GGHHHHHHHHHTTC---EEEEEECC---TTCH
T ss_pred CEEEEECCCchHHHHHHHHHHH-------C-----CCEEEEEeCCHH-HHHHHHHHHHhcCC---eEEEEECc---CCCH
Confidence 4577778886654443322221 1 223566665433 2333322 2233 56677665 2377
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCcccc
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGA 111 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~ 111 (448)
+.+++.+++..+. .+..+++-+++....+.
T Consensus 69 ~~v~~~~~~~~~~-g~id~lv~nAg~~~~~~ 98 (252)
T 3h7a_A 69 DEVTAFLNAADAH-APLEVTIFNVGANVNFP 98 (252)
T ss_dssp HHHHHHHHHHHHH-SCEEEEEECCCCCCCCC
T ss_pred HHHHHHHHHHHhh-CCceEEEECCCcCCCCC
Confidence 8888888765544 45667777776655443
No 302
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=27.86 E-value=1.5e+02 Score=27.24 Aligned_cols=61 Identities=16% Similarity=0.031 Sum_probs=41.4
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEecc--C--CccccccCHHHHHHHHHHcCCEEEEeccccccc
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAG--T--TVLGAFDPLDEIATVCEKYDLWMHVDACWGGSL 139 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~--~--t~tG~~~~l~~I~~ia~~~g~~l~VD~A~~~~~ 139 (448)
.+++++..+++.....|. +.++++--+ + +.+=..-++..+..+.+..+.++++|..|+.+.
T Consensus 141 ~t~~e~~~Av~~i~~~Gn-~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 141 NTIQELLYSAEYIMAQGN-ENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp CCHHHHHHHHHHHHTTTC-CCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred CCHHHHHHHHHHHHHCCC-CeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 389999999977655553 334444322 1 222233467888888887899999999999775
No 303
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=27.81 E-value=39 Score=31.65 Aligned_cols=52 Identities=13% Similarity=-0.024 Sum_probs=33.9
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc---cccCHHHHHHHHHHc
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG---AFDPLDEIATVCEKY 125 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG---~~~~l~~I~~ia~~~ 125 (448)
|.++++.+|.+.+++.++...+.|- ..+++ .++|--+ ..+.-.++.+.+.+.
T Consensus 10 Pf~~dg~iD~~~l~~lv~~li~~Gv--~gl~~-~GttGE~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 10 PFTKDNRIDKEKLKIHAENLIRKGI--DKLFV-NGTTGLGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTC--CEEEE-SSTTTTGGGSCHHHHHHHHHHHHTT
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCC--CEEEE-CccccChhhCCHHHHHHHHHHHHHH
Confidence 4567899999999999988766653 33333 3333333 344566677777764
No 304
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=27.75 E-value=30 Score=35.37 Aligned_cols=28 Identities=14% Similarity=0.055 Sum_probs=25.9
Q ss_pred CccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 107 TVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 107 t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
...|..++++++++-||++|+.+++|..
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 6679999999999999999999999974
No 305
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=27.70 E-value=26 Score=35.12 Aligned_cols=31 Identities=16% Similarity=0.267 Sum_probs=27.1
Q ss_pred ccCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 104 AGTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 104 ~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.+....|..++++++++-||++|+.+++|..
T Consensus 88 ~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V 118 (475)
T 2z1k_A 88 QVDPILGGNEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp EECGGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3455678899999999999999999999985
No 306
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=27.49 E-value=34 Score=31.99 Aligned_cols=52 Identities=17% Similarity=0.123 Sum_probs=33.6
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc---cccCHHHHHHHHHHc
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG---AFDPLDEIATVCEKY 125 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG---~~~~l~~I~~ia~~~ 125 (448)
|.+++|.+|.+.+++.++...+.|-. .++ ..++|--+ ..+.-.++.+.+.+.
T Consensus 10 Pf~~dg~iD~~~l~~lv~~li~~Gv~--gl~-v~GtTGE~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 10 PFDKQGKVNVDALKTHAKNLLEKGID--AIF-VNGTTGLGPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCC--EEE-ETSTTTTGGGSCHHHHHHHHHHHTTT
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCC--EEE-ECccccChhhCCHHHHHHHHHHHHHH
Confidence 45678999999999999887666533 333 33333333 344556677777664
No 307
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=27.47 E-value=38 Score=32.23 Aligned_cols=61 Identities=10% Similarity=-0.013 Sum_probs=39.6
Q ss_pred ecC-CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTN-ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~-~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+ ++|.+|.+.+++.++...+.|-.-.++.-+.++..+=..+.-.++.+.+.+. .+++++
T Consensus 21 Pf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 85 (318)
T 3qfe_A 21 FFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMA 85 (318)
T ss_dssp CEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 445 7899999999999998777663332333344444444556666777777664 467766
No 308
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=27.30 E-value=35 Score=32.49 Aligned_cols=61 Identities=8% Similarity=0.056 Sum_probs=37.4
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+.|-.-.++.-+.++..+=..+.-.++.+.+.+. .+++++
T Consensus 33 Pf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 33 PFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4567899999999999988777663322222223333333445556677766654 466665
No 309
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=27.21 E-value=26 Score=35.21 Aligned_cols=32 Identities=16% Similarity=0.284 Sum_probs=27.5
Q ss_pred eccCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 103 TAGTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 103 ~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
..+....|..++++++++-||++|+.+++|..
T Consensus 88 ~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 88 YDVNSNFGTADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp EEECTTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cccCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 34456678899999999999999999999985
No 310
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=27.21 E-value=3.2e+02 Score=24.01 Aligned_cols=90 Identities=13% Similarity=0.031 Sum_probs=46.7
Q ss_pred CccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHH
Q psy14299 2 NLKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 2 ~~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e 81 (448)
....++++||+-.+=.++...... + ...++++++.. ....+.....+. ++..+..| .-|.+
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~-------~-----G~~V~~~~r~~-~~~~~~~~~~~~---~~~~~~~D---~~~~~ 65 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLG-------E-----GAKVAFSDINE-AAGQQLAAELGE---RSMFVRHD---VSSEA 65 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHH-------T-----TCEEEEECSCH-HHHHHHHHHHCT---TEEEECCC---TTCHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-------C-----CCEEEEEeCCH-HHHHHHHHHcCC---ceEEEEcc---CCCHH
Confidence 345678888886654443222221 1 22345555433 333344443343 46666654 23778
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCccc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLG 110 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG 110 (448)
.+++.+++..+...+..+++-+.+....+
T Consensus 66 ~v~~~~~~~~~~~g~id~lv~~Ag~~~~~ 94 (253)
T 1hxh_A 66 DWTLVMAAVQRRLGTLNVLVNNAGILLPG 94 (253)
T ss_dssp HHHHHHHHHHHHHCSCCEEEECCCCCCCB
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 88887766433333455677666655444
No 311
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=27.12 E-value=2.1e+02 Score=25.61 Aligned_cols=43 Identities=12% Similarity=0.131 Sum_probs=24.3
Q ss_pred cEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccc
Q psy14299 66 NVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA 111 (448)
Q Consensus 66 ~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~ 111 (448)
++..+..| .-|.+.+++.+++..+...+..+++-+.+....+.
T Consensus 69 ~~~~~~~D---v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~ 111 (270)
T 3is3_A 69 DAIAIKAD---IRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGH 111 (270)
T ss_dssp CEEEEECC---TTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCC
T ss_pred cEEEEEcC---CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 46666654 23677777777654433334556666655554443
No 312
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=27.00 E-value=1.2e+02 Score=27.11 Aligned_cols=63 Identities=16% Similarity=0.083 Sum_probs=40.7
Q ss_pred EEEEecCCCCCc-CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEE
Q psy14299 67 VIRVKTNERGQM-ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMH 130 (448)
Q Consensus 67 v~~v~~~~~g~i-d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~ 130 (448)
+.++...++|.+ -.-+-|..++-.+-.|..|..|++.-. +..|...+.+++.+++++||+.++
T Consensus 137 vfPL~A~~gGvl~R~GhTEAavdLarLAGl~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~i 200 (217)
T 1g57_A 137 VFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELT-NDDGTMARAPECIEFANKHNMALV 200 (217)
T ss_dssp EEEEECCTTGGGTCCSHHHHHHHHHHHTTSCSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEE
T ss_pred ccceeecCCCcccCCCcHHHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEE
Confidence 344444444432 123334444433335667877777655 567999999999999999999874
No 313
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=26.91 E-value=70 Score=25.71 Aligned_cols=43 Identities=16% Similarity=0.020 Sum_probs=28.8
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEE
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMH 130 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~ 130 (448)
.++.+...+++..+.+ ++.|+++.+. .+ +++.++|+++|+.++
T Consensus 67 p~~~v~~~v~e~~~~g--~k~v~~~~G~-----~~--~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 67 NPQNQLSEYNYILSLK--PKRVIFNPGT-----EN--EELEEILSENGIEPV 109 (122)
T ss_dssp CHHHHGGGHHHHHHHC--CSEEEECTTC-----CC--HHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHHHhcC--CCEEEECCCC-----Ch--HHHHHHHHHcCCeEE
Confidence 3455566666655555 3456665543 33 699999999999887
No 314
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=26.58 E-value=1.7e+02 Score=26.58 Aligned_cols=86 Identities=12% Similarity=0.039 Sum_probs=46.7
Q ss_pred CccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH---HhCCCCCcEEEEecCCCCCc
Q psy14299 2 NLKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH---WLGIGMDNVIRVKTNERGQM 78 (448)
Q Consensus 2 ~~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~---~~g~~~~~v~~v~~~~~g~i 78 (448)
..-.++++||+-++=.++...... + .-.+++++... ....+.++ -.|. ++..++.| .-
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~-------~-----Ga~Vv~~~~~~-~~~~~~~~~i~~~g~---~~~~~~~D---vt 66 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFAL-------N-----DSIVVAVELLE-DRLNQIVQELRGMGK---EVLGVKAD---VS 66 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-------T-----TCEEEEEESCH-HHHHHHHHHHHHTTC---CEEEEECC---TT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH-------c-----CCEEEEEECCH-HHHHHHHHHHHhcCC---cEEEEEcc---CC
Confidence 345677888887764444322222 1 23455655443 33333333 2333 57777765 23
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccC
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGT 106 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~ 106 (448)
|.+++++.+++..++-.+.-+++-+++-
T Consensus 67 ~~~~v~~~~~~~~~~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 67 KKKDVEEFVRRTFETYSRIDVLCNNAGI 94 (254)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence 7788888887655443455566666653
No 315
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=26.35 E-value=2.7e+02 Score=24.74 Aligned_cols=93 Identities=16% Similarity=-0.040 Sum_probs=47.2
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
...++++||+-++=.++...... + ...++++.........+..........++..+..| .-|.+.
T Consensus 4 ~k~vlVTGas~gIG~aia~~l~~-------~-----G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D---v~~~~~ 68 (258)
T 3oid_A 4 NKCALVTGSSRGVGKAAAIRLAE-------N-----GYNIVINYARSKKAALETAEEIEKLGVKVLVVKAN---VGQPAK 68 (258)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHH-------T-----TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECC---TTCHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHH-------C-----CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcC---CCCHHH
Confidence 34678888887654443322222 1 22344432333333344333221111146666655 237788
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCCccc
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTTVLG 110 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t~tG 110 (448)
+++++++..+...+..+++-+++....+
T Consensus 69 v~~~~~~~~~~~g~id~lv~nAg~~~~~ 96 (258)
T 3oid_A 69 IKEMFQQIDETFGRLDVFVNNAASGVLR 96 (258)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCS
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 8888876544433556777777654444
No 316
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=26.13 E-value=25 Score=35.30 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=26.5
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.....|..++++++++-||++|+.+++|..
T Consensus 67 idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V 96 (471)
T 1jae_A 67 INTRSGDESAFTDMTRRCNDAGVRIYVDAV 96 (471)
T ss_dssp SEETTEEHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 345579999999999999999999999974
No 317
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=25.81 E-value=1.8e+02 Score=26.77 Aligned_cols=43 Identities=14% Similarity=-0.005 Sum_probs=23.7
Q ss_pred cEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccc
Q psy14299 66 NVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA 111 (448)
Q Consensus 66 ~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~ 111 (448)
++..+..| .-|.+.+++++++..+...++.+++-+.+....+.
T Consensus 81 ~~~~~~~D---v~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~ 123 (301)
T 3tjr_A 81 DAHGVVCD---VRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGP 123 (301)
T ss_dssp CEEEEECC---TTCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBC
T ss_pred ceEEEEcc---CCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCC
Confidence 45556554 22667777777654333234556666666554443
No 318
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=25.80 E-value=39 Score=32.09 Aligned_cols=61 Identities=7% Similarity=0.021 Sum_probs=37.2
Q ss_pred ecCC-CCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNE-RGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~-~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.++ +|.+|.+.+++.++...+.|-.-.++.-+.++..+=..+.-.++.+.+.+. .+++++
T Consensus 22 Pf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpVia 86 (316)
T 3e96_A 22 PFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVA 86 (316)
T ss_dssp CBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 5567 899999999999988766653322222233333333445556677766654 466654
No 319
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=25.69 E-value=2.6e+02 Score=25.76 Aligned_cols=61 Identities=18% Similarity=-0.010 Sum_probs=42.2
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccC-Cccc---cccCHHHHHHHHHHcCCEEEEeccccccc
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGT-TVLG---AFDPLDEIATVCEKYDLWMHVDACWGGSL 139 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~-t~tG---~~~~l~~I~~ia~~~g~~l~VD~A~~~~~ 139 (448)
.++++++.+++.....|. +.++++--++ +..+ ..-++..|..+.+.++.++++|..|+.|.
T Consensus 156 ~t~~ei~~Ave~i~~~Gn-~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g~ 220 (276)
T 1vs1_A 156 NTVEELLAAAEYILLEGN-WQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAGR 220 (276)
T ss_dssp CCHHHHHHHHHHHHHTTC-CCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHCS
T ss_pred CCHHHHHHHHHHHHHcCC-CeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCCc
Confidence 589999999987666653 3344444143 2212 34568888888777899999999999774
No 320
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=25.69 E-value=22 Score=33.24 Aligned_cols=58 Identities=10% Similarity=-0.072 Sum_probs=33.9
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCCEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDLWMH 130 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~~l~ 130 (448)
|.+++|.+|.+.+++.++...+. -.-.++.-+.++..+=..+.-.++.+.+.+ .++++
T Consensus 9 Pf~~dg~iD~~~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-rvpvi 66 (283)
T 2pcq_A 9 PFDREGRLDEEAFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP-RKPFL 66 (283)
T ss_dssp CBCTTCCBCHHHHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC-SSCCE
T ss_pred CCCCCCCcCHHHHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh-CCcEE
Confidence 55678999999999999875543 222222222233323333445566666666 56655
No 321
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=25.46 E-value=3.6e+02 Score=23.93 Aligned_cols=93 Identities=16% Similarity=0.039 Sum_probs=46.3
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHh-CCCCCcEEEEecCCCCCcCHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWL-GIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~-g~~~~~v~~v~~~~~g~id~e 81 (448)
...++++||+-++=.++...... + ...++++++. .....+....+ ..+..++..+..| .-|.+
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~-------~-----G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D---v~~~~ 73 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFAR-------A-----GANVAVAGRS-TADIDACVADLDQLGSGKVIGVQTD---VSDRA 73 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHH-------T-----TCEEEEEESC-HHHHHHHHHHHHTTSSSCEEEEECC---TTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-------C-----CCEEEEEeCC-HHHHHHHHHHHHhhCCCcEEEEEcC---CCCHH
Confidence 34677888886654433222221 1 2234555543 23333333322 2221246666655 23677
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCCcccc
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTTVLGA 111 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~ 111 (448)
.+++++++..++..+..+++-+.+....+.
T Consensus 74 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~ 103 (262)
T 3pk0_A 74 QCDALAGRAVEEFGGIDVVCANAGVFPDAP 103 (262)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCCCCCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 777777654443334556776666554443
No 322
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=25.19 E-value=3.6e+02 Score=23.96 Aligned_cols=89 Identities=16% Similarity=0.021 Sum_probs=47.0
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++++||+-.+=.++.-.... + ...++++++. .....+.....+- ++..+..| .-|.+.+
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~-------~-----G~~V~~~~r~-~~~~~~~~~~~~~---~~~~~~~D---v~~~~~~ 66 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVA-------A-----GDTVIGTARR-TEALDDLVAAYPD---RAEAISLD---VTDGERI 66 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH-------T-----TCEEEEEESS-GGGGHHHHHHCTT---TEEEEECC---TTCHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHH-------C-----CCEEEEEeCC-HHHHHHHHHhccC---CceEEEee---CCCHHHH
Confidence 4578888886654333222221 1 2234555543 3344444444443 46666654 2377888
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCCcccc
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTTVLGA 111 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t~tG~ 111 (448)
++.+++..+...++..|+-+++....+.
T Consensus 67 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~ 94 (281)
T 3m1a_A 67 DVVAADVLARYGRVDVLVNNAGRTQVGA 94 (281)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCCEEECC
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCCCCC
Confidence 8877654443334567777766554443
No 323
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=25.07 E-value=28 Score=35.02 Aligned_cols=31 Identities=13% Similarity=0.278 Sum_probs=26.7
Q ss_pred ccCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 104 AGTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 104 ~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
......|..++++++++-||++|+.+++|..
T Consensus 94 ~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 124 (488)
T 2wc7_A 94 QVDPMLGGNEAFKELLDAAHQRNIKVVLDGV 124 (488)
T ss_dssp EECGGGTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3455578889999999999999999999984
No 324
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=25.01 E-value=33 Score=35.32 Aligned_cols=30 Identities=17% Similarity=0.280 Sum_probs=26.3
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
+....|..++++++++-||++|+.+++|..
T Consensus 72 idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 101 (557)
T 1zja_A 72 VMKEYGTMEDFDRLMAELKKRGMRLMVDVV 101 (557)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 345568899999999999999999999985
No 325
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=25.01 E-value=33 Score=35.55 Aligned_cols=29 Identities=17% Similarity=0.367 Sum_probs=25.1
Q ss_pred CCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 106 TTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 106 ~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
+...|..++++++++-||++|+.+++|..
T Consensus 216 dp~~Gt~~df~~lv~~~H~~Gi~VilD~V 244 (588)
T 1j0h_A 216 DPHFGDKETLKTLIDRCHEKGIRVMLDAV 244 (588)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 34457788899999999999999999985
No 326
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=24.77 E-value=3.6e+02 Score=23.80 Aligned_cols=89 Identities=10% Similarity=0.044 Sum_probs=44.3
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHh-CCCCCcEEEEecCCCCCcCHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWL-GIGMDNVIRVKTNERGQMICS 81 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~-g~~~~~v~~v~~~~~g~id~e 81 (448)
...++++||+-++=.++...... + ...++++.........+..... ..+. ++..+..| --|.+
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~-------~-----G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D---v~~~~ 71 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQ-------E-----GANVVLTYNGAAEGAATAVAEIEKLGR-SALAIKAD---LTNAA 71 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-------T-----TCEEEEEECSSCHHHHHHHHHHHTTTS-CCEEEECC---TTCHH
T ss_pred CCEEEEECCCchHHHHHHHHHHH-------C-----CCEEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEcC---CCCHH
Confidence 34677788886654443222221 1 2234555344444444333322 2221 45566654 23778
Q ss_pred HHHHHHHHhhhcCCCcEEEEEeccCC
Q psy14299 82 FLEQTIQTSLAEKKIPLFVNATAGTT 107 (448)
Q Consensus 82 ~Le~~l~~~~~~~~~~~lVv~~~~~t 107 (448)
.+++.+++..+...+...++-+.+..
T Consensus 72 ~v~~~~~~~~~~~g~id~lv~nAg~~ 97 (259)
T 3edm_A 72 EVEAAISAAADKFGEIHGLVHVAGGL 97 (259)
T ss_dssp HHHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCcc
Confidence 88888776444433455666665543
No 327
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=24.74 E-value=31 Score=35.60 Aligned_cols=29 Identities=14% Similarity=0.362 Sum_probs=25.3
Q ss_pred CCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 106 TTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 106 ~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
....|..++++++++-||++|+.+++|..
T Consensus 86 dp~~Gt~~df~~lv~~aH~~Gi~VilD~V 114 (570)
T 1m53_A 86 MKEYGTMEDFDSLVAEMKKRNMRLMIDVV 114 (570)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 34467888999999999999999999985
No 328
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=24.68 E-value=3e+02 Score=24.07 Aligned_cols=91 Identities=15% Similarity=0.046 Sum_probs=46.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH---HhCCCCCcEEEEecCCCCCcCH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH---WLGIGMDNVIRVKTNERGQMIC 80 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~---~~g~~~~~v~~v~~~~~g~id~ 80 (448)
..++++||+-++=.++...... + ...++++.........+..+ ..+. ++..++.| .-|.
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~-------~-----G~~V~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D---v~d~ 66 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAE-------E-----GYNVAVNYAGSKEKAEAVVEEIKAKGV---DSFAIQAN---VADA 66 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHH-------T-----TCEEEEEESSCHHHHHHHHHHHHHTTS---CEEEEECC---TTCH
T ss_pred CEEEEECCCChHHHHHHHHHHH-------C-----CCEEEEEeCCCHHHHHHHHHHHHhcCC---cEEEEEcc---CCCH
Confidence 4577788886654443222221 1 22344444433333333332 2233 46666654 2377
Q ss_pred HHHHHHHHHhhhcCCCcEEEEEeccCCccccc
Q psy14299 81 SFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF 112 (448)
Q Consensus 81 e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~ 112 (448)
+.+++.+++..+...+...++-+.+....+.+
T Consensus 67 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 98 (246)
T 3osu_A 67 DEVKAMIKEVVSQFGSLDVLVNNAGITRDNLL 98 (246)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 88888777644433355677777766544433
No 329
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=24.60 E-value=2e+02 Score=26.03 Aligned_cols=46 Identities=9% Similarity=0.008 Sum_probs=29.2
Q ss_pred cEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccC
Q psy14299 66 NVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDP 114 (448)
Q Consensus 66 ~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~ 114 (448)
++..+..| .-|.+++++.+++..++-.+.-+++-+++....+.+.+
T Consensus 48 ~~~~~~~D---v~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~ 93 (247)
T 3ged_A 48 NLFYFHGD---VADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSS 93 (247)
T ss_dssp TEEEEECC---TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGT
T ss_pred CEEEEEec---CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCccc
Confidence 46666655 23778888888765554345667777777666665543
No 330
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=24.54 E-value=2.6e+02 Score=25.10 Aligned_cols=42 Identities=12% Similarity=0.102 Sum_probs=23.6
Q ss_pred cEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc
Q psy14299 66 NVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG 110 (448)
Q Consensus 66 ~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG 110 (448)
++..+..| .-|.+.+++.+++..+...+..+++-+.+....+
T Consensus 82 ~~~~~~~D---v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~ 123 (271)
T 3v2g_A 82 RAVAIRAD---NRDAEAIEQAIRETVEALGGLDILVNSAGIWHSA 123 (271)
T ss_dssp CEEEEECC---TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred cEEEEECC---CCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC
Confidence 46666654 2367777777765443333455666666554444
No 331
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=24.16 E-value=40 Score=35.05 Aligned_cols=27 Identities=15% Similarity=0.171 Sum_probs=24.1
Q ss_pred ccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 108 VLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 108 ~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
..|..++++++++-||++|+.+++|..
T Consensus 194 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V 220 (601)
T 3edf_A 194 RYGSNEDFVRLSTEARKRGMGLIQDVV 220 (601)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 357778899999999999999999985
No 332
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=24.13 E-value=2.7e+02 Score=24.90 Aligned_cols=42 Identities=17% Similarity=-0.004 Sum_probs=23.3
Q ss_pred cEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc
Q psy14299 66 NVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG 110 (448)
Q Consensus 66 ~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG 110 (448)
++..+..| .-|.+.+++++++..+...+..+++-+++....+
T Consensus 79 ~~~~~~~D---~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 120 (269)
T 4dmm_A 79 EAFAVKAD---VSQESEVEALFAAVIERWGRLDVLVNNAGITRDT 120 (269)
T ss_dssp CEEEEECC---TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred cEEEEECC---CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 45566554 2266777777765433333455666666655444
No 333
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=23.92 E-value=39 Score=35.18 Aligned_cols=29 Identities=21% Similarity=0.221 Sum_probs=25.6
Q ss_pred CCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 106 TTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 106 ~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
....|..++++++++-||++|+.+++|..
T Consensus 202 dp~~Gt~~dfk~Lv~~aH~~GI~VilD~V 230 (599)
T 3bc9_A 202 RTKYGTKGELENAIDALHNNDIKVYFDAV 230 (599)
T ss_dssp SBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 34568889999999999999999999985
No 334
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=23.80 E-value=38 Score=34.81 Aligned_cols=30 Identities=13% Similarity=0.227 Sum_probs=26.4
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.....|..++++++++-||++|+.+++|..
T Consensus 71 id~~~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (558)
T 1uok_A 71 IMNEFGTMEDWDELLHEMHERNMKLMMDLV 100 (558)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 345578899999999999999999999985
No 335
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=23.76 E-value=45 Score=31.62 Aligned_cols=61 Identities=10% Similarity=0.039 Sum_probs=36.7
Q ss_pred ec-CCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KT-NERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~-~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|. +++|.+|.+.+++.++...+.|-.-.++.-+.++..+=..+.-.++.+.+.+. .+++++
T Consensus 22 PF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia 86 (314)
T 3d0c_A 22 PFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVA 86 (314)
T ss_dssp CBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred cccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 55 67899999999999988766653321122233333333444556666666653 466665
No 336
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=23.63 E-value=33 Score=35.52 Aligned_cols=29 Identities=10% Similarity=0.252 Sum_probs=25.0
Q ss_pred CCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 106 TTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 106 ~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
+...|..++++++++-||++|+.+++|..
T Consensus 213 d~~~Gt~~dfk~lv~~~H~~Gi~VilD~V 241 (585)
T 1wzl_A 213 DPQFGDLPTFRRLVDEAHRRGIKIILDAV 241 (585)
T ss_dssp CTTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 34457788899999999999999999985
No 337
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=23.57 E-value=40 Score=35.66 Aligned_cols=30 Identities=7% Similarity=0.209 Sum_probs=26.0
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.....|..++++++++-||++|+.+++|..
T Consensus 108 idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V 137 (686)
T 1d3c_A 108 TNPAYGTIADFQNLIAAAHAKNIKVIIDFA 137 (686)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 344568889999999999999999999974
No 338
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=23.41 E-value=28 Score=34.36 Aligned_cols=30 Identities=30% Similarity=0.509 Sum_probs=26.5
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
++...|..++++++++-||++|+.+++|..
T Consensus 67 ~~~~~G~~~d~~~lv~~~h~~Gi~VilD~V 96 (422)
T 1ua7_A 67 GNRYLGTEQEFKEMCAAAEEYGIKVIVDAV 96 (422)
T ss_dssp EETTTEEHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 344569999999999999999999999985
No 339
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=23.34 E-value=4.2e+02 Score=23.97 Aligned_cols=88 Identities=8% Similarity=0.019 Sum_probs=41.5
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++++||+-++=.++...... + ...+++++...................++..+..| .-|.+.+
T Consensus 48 k~vlVTGas~GIG~aia~~la~-------~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D---v~d~~~v 112 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAK-------E-----GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGD---LSDEQHC 112 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-------T-----TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESC---TTSHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHH-------C-----CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECC---CCCHHHH
Confidence 4577777776654433222221 1 22345555444333333322221111146666654 2367777
Q ss_pred HHHHHHhhhcCCCcEEEEEeccC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGT 106 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~ 106 (448)
++++++..++..+..+++-+.+.
T Consensus 113 ~~~~~~~~~~~g~iD~lvnnAg~ 135 (291)
T 3ijr_A 113 KDIVQETVRQLGSLNILVNNVAQ 135 (291)
T ss_dssp HHHHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 77776544333344555555443
No 340
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=23.23 E-value=1e+02 Score=28.88 Aligned_cols=57 Identities=11% Similarity=0.028 Sum_probs=36.8
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc---cCHHHHHHHHHHc-CCEEEEecccc
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF---DPLDEIATVCEKY-DLWMHVDACWG 136 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~---~~l~~I~~ia~~~-g~~l~VD~A~~ 136 (448)
.++++++.+++...+.|. ..++++..+++ .+.- .|+..|-.+.+.. |.++++|..|+
T Consensus 145 ~t~~ei~~ave~i~~~Gn-~~i~L~erg~~-y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs 205 (285)
T 3sz8_A 145 MSPTQLKHVVSKCGEVGN-DRVMLCERGSS-FGYDNLVVDMLGFRQMAETTGGCPVIFDVTHS 205 (285)
T ss_dssp SCGGGTHHHHHHHHHTTC-CCEEEEECCEE-CSSSCEECCTTHHHHHHHHTTSCCEEEETTTT
T ss_pred CCHHHHHHHHHHHHHcCC-CcEEEEeCCCC-CCCCcCccCHHHHHHHHHhCCCCCEEEeCCCc
Confidence 577777777776555543 33444433332 3433 3788888887776 78998998887
No 341
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=23.19 E-value=41 Score=35.56 Aligned_cols=32 Identities=13% Similarity=0.188 Sum_probs=27.6
Q ss_pred eccCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 103 TAGTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 103 ~~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.......|..++++++++-||++|+.+++|..
T Consensus 98 ~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V 129 (686)
T 1qho_A 98 KQIEEHFGNWTTFDTLVNDAHQNGIKVIVDFV 129 (686)
T ss_dssp EEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCcccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 33456678999999999999999999999985
No 342
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=23.14 E-value=44 Score=31.47 Aligned_cols=58 Identities=7% Similarity=0.039 Sum_probs=35.4
Q ss_pred CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc----CCEEEE
Q psy14299 74 ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY----DLWMHV 131 (448)
Q Consensus 74 ~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~----g~~l~V 131 (448)
++|.+|.+.+++.++...+.|-.-.++.-+.++..+=..+.-+++.+.+.+. .+++++
T Consensus 21 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 21 KNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 5899999999999988776653322222222333232445556677766654 477776
No 343
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=23.10 E-value=3.1e+02 Score=24.59 Aligned_cols=89 Identities=16% Similarity=0.074 Sum_probs=44.2
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHH----HhCCCCCcEEEEecCCCCCc
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAH----WLGIGMDNVIRVKTNERGQM 78 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~----~~g~~~~~v~~v~~~~~g~i 78 (448)
...++++||+-++=.++...... + ...+++++.... ...+.+. ..+. ++..+..| .-
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~-------~-----G~~V~~~~r~~~-~~~~~~~~~~~~~~~---~~~~~~~D---v~ 87 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMR-------H-----GCHTVIASRSLP-RVLTAARKLAGATGR---RCLPLSMD---VR 87 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHT-------T-----TCEEEEEESCHH-HHHHHHHHHHHHHSS---CEEEEECC---TT
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-------C-----CCEEEEEeCCHH-HHHHHHHHHHHhcCC---cEEEEEcC---CC
Confidence 34577778876654443322221 1 223555554432 2222222 1243 46666654 23
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccc
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG 110 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG 110 (448)
|.+.+++++++..+...+..+++-+.+....+
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 119 (277)
T 4fc7_A 88 APPAVMAAVDQALKEFGRIDILINCAAGNFLC 119 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCcCCCCC
Confidence 67777777765444333455666666644433
No 344
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=23.05 E-value=36 Score=35.27 Aligned_cols=56 Identities=11% Similarity=0.132 Sum_probs=37.1
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEe---------------ccCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNAT---------------AGTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~---------------~~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
|...+.+.|+-.++-|....-+.-. .++...|..++++++++-||++|+.+++|..
T Consensus 170 d~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V 240 (583)
T 1ea9_C 170 DLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAV 240 (583)
T ss_dssp CHHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 6777777775444444332222211 1223356778899999999999999999985
No 345
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=22.97 E-value=54 Score=30.56 Aligned_cols=58 Identities=10% Similarity=0.011 Sum_probs=35.3
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEE--eccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNA--TAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~--~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+ +|.+|.+.+++.++...+.|-. .+++ +.++..+=..+.-.++.+.+.+. .+++++
T Consensus 12 Pf~-dg~iD~~~l~~lv~~li~~Gv~--gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 74 (289)
T 2yxg_A 12 PFK-NKEVDFDGLEENINFLIENGVS--GIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIA 74 (289)
T ss_dssp CEE-TTEECHHHHHHHHHHHHHTTCS--EEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CcC-CCCcCHHHHHHHHHHHHHCCCC--EEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 445 8999999999999877666533 3333 22333333344556666766653 366653
No 346
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=22.94 E-value=2.9e+02 Score=24.81 Aligned_cols=85 Identities=12% Similarity=0.014 Sum_probs=43.3
Q ss_pred cEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHH
Q psy14299 4 KPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFL 83 (448)
Q Consensus 4 ~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~L 83 (448)
..++++||+-++=.++...... + ...++++++. .....+.....+. ++..+..| .-|.+.+
T Consensus 29 k~~lVTGas~GIG~aia~~la~-------~-----G~~V~~~~r~-~~~~~~~~~~~~~---~~~~~~~D---v~d~~~v 89 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAG-------A-----GYGVALAGRR-LDALQETAAEIGD---DALCVPTD---VTDPDSV 89 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH-------T-----TCEEEEEESC-HHHHHHHHHHHTS---CCEEEECC---TTSHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHH-------C-----CCEEEEEECC-HHHHHHHHHHhCC---CeEEEEec---CCCHHHH
Confidence 4567788876654443322221 1 1234555443 3344455544443 45555554 2267777
Q ss_pred HHHHHHhhhcCCCcEEEEEeccCC
Q psy14299 84 EQTIQTSLAEKKIPLFVNATAGTT 107 (448)
Q Consensus 84 e~~l~~~~~~~~~~~lVv~~~~~t 107 (448)
++.+++..+...+..+++-+.+..
T Consensus 90 ~~~~~~~~~~~g~iD~lVnnAg~~ 113 (272)
T 4dyv_A 90 RALFTATVEKFGRVDVLFNNAGTG 113 (272)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 777765433333455666666553
No 347
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=22.91 E-value=41 Score=34.57 Aligned_cols=30 Identities=20% Similarity=0.289 Sum_probs=26.0
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.....|..++++++++-||++|+.+++|..
T Consensus 71 id~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 100 (555)
T 2ze0_A 71 IMDEFGTMDDFDELLAQAHRRGLKVILDLV 100 (555)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 345568889999999999999999999984
No 348
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=22.77 E-value=43 Score=35.41 Aligned_cols=30 Identities=7% Similarity=0.220 Sum_probs=26.1
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.....|..++++++++-||++|+.+++|..
T Consensus 104 idp~~Gt~~df~~Lv~~aH~~GIkVilD~V 133 (680)
T 1cyg_A 104 PNPFFGTLSDFQRLVDAAHAKGIKVIIDFA 133 (680)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 344568889999999999999999999984
No 349
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=22.73 E-value=3.9e+02 Score=23.66 Aligned_cols=43 Identities=14% Similarity=-0.028 Sum_probs=24.4
Q ss_pred cEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCcccc
Q psy14299 66 NVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGA 111 (448)
Q Consensus 66 ~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~ 111 (448)
++..+..| --|.+.+++.+++..+...+...++-+.+....+.
T Consensus 76 ~~~~~~~D---l~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~ 118 (269)
T 3gk3_A 76 DFKAYAVD---VADFESCERCAEKVLADFGKVDVLINNAGITRDAT 118 (269)
T ss_dssp CCEEEECC---TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBC
T ss_pred ceEEEEec---CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcc
Confidence 45566654 22677777777654433234556776666554443
No 350
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=22.65 E-value=3.1e+02 Score=24.42 Aligned_cols=42 Identities=17% Similarity=0.038 Sum_probs=23.2
Q ss_pred cEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc
Q psy14299 66 NVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG 110 (448)
Q Consensus 66 ~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG 110 (448)
++..++.| .-|.+.+++.+++..+...+...++-+++....+
T Consensus 80 ~~~~~~~D---~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~ 121 (271)
T 4iin_A 80 KAAVIKFD---AASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDK 121 (271)
T ss_dssp CEEEEECC---TTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCC
T ss_pred ceEEEECC---CCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCc
Confidence 45666654 2266677777665433333455666666655444
No 351
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=22.51 E-value=1.2e+02 Score=26.71 Aligned_cols=26 Identities=12% Similarity=0.112 Sum_probs=18.8
Q ss_pred cccCHHHHHHHHHHcCCEEEEec-ccc
Q psy14299 111 AFDPLDEIATVCEKYDLWMHVDA-CWG 136 (448)
Q Consensus 111 ~~~~l~~I~~ia~~~g~~l~VD~-A~~ 136 (448)
.+.+..++.++|+++|+++++.. ||.
T Consensus 145 ~~~~~~~il~l~k~~g~~ivisSDAh~ 171 (212)
T 1v77_A 145 LLRFMMKAWKLVEKYKVRRFLTSSAQE 171 (212)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSS
T ss_pred HHHHHHHHHHHHHhcCCCEEEeCCCCC
Confidence 36677788888888888887753 444
No 352
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=22.41 E-value=3.9e+02 Score=23.36 Aligned_cols=86 Identities=12% Similarity=0.038 Sum_probs=45.6
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHH
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSF 82 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~ 82 (448)
...++++||+-++=.++.-.... + ...++++++. .....+.....+. ++..+..|- -|.+.
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~-------~-----G~~V~~~~r~-~~~~~~~~~~~~~---~~~~~~~D~---~~~~~ 69 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAK-------G-----GAKVVIVDRD-KAGAERVAGEIGD---AALAVAADI---SKEAD 69 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-------T-----TCEEEEEESC-HHHHHHHHHHHCT---TEEEEECCT---TSHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHH-------C-----CCEEEEEcCC-HHHHHHHHHHhCC---ceEEEEecC---CCHHH
Confidence 34577788876643333222221 1 2235555543 3344555555554 566666652 36777
Q ss_pred HHHHHHHhhhcCCCcEEEEEeccCC
Q psy14299 83 LEQTIQTSLAEKKIPLFVNATAGTT 107 (448)
Q Consensus 83 Le~~l~~~~~~~~~~~lVv~~~~~t 107 (448)
+++.+++..+...++..++-+.+..
T Consensus 70 ~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 70 VDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 8777766444333455666666544
No 353
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=22.28 E-value=3.5e+02 Score=24.38 Aligned_cols=61 Identities=10% Similarity=-0.065 Sum_probs=29.7
Q ss_pred EEEecCCCchHHHHHHHHhCCCCCcEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccC
Q psy14299 42 CMFTSEDSHYSMLKAAHWLGIGMDNVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGT 106 (448)
Q Consensus 42 ~Vl~~~~~H~s~~~~~~~~g~~~~~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~ 106 (448)
++++++.. ....+....+.....++..+..| .-|.+++++++++..+...+..+++-+++.
T Consensus 55 V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~D---v~d~~~v~~~~~~~~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 55 VGALGRTR-TEVEEVADEIVGAGGQAIALEAD---VSDELQMRNAVRDLVLKFGHLDIVVANAGI 115 (283)
T ss_dssp EEEEESSH-HHHHHHHHHHTTTTCCEEEEECC---TTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred EEEEeCCH-HHHHHHHHHHHhcCCcEEEEEcc---CCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 45555432 33444443332111245666654 236777777776544333345566666554
No 354
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=22.25 E-value=4.2e+02 Score=24.92 Aligned_cols=39 Identities=3% Similarity=-0.069 Sum_probs=18.3
Q ss_pred cEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCC
Q psy14299 66 NVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTT 107 (448)
Q Consensus 66 ~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t 107 (448)
++..+..| .-|.+.+++++++..+...+..+++-+.+..
T Consensus 102 ~~~~~~~D---v~d~~~v~~~~~~~~~~~g~iDilVnnAG~~ 140 (346)
T 3kvo_A 102 KALPCIVD---VRDEQQISAAVEKAIKKFGGIDILVNNASAI 140 (346)
T ss_dssp EEEEEECC---TTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred eEEEEEcc---CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 34455443 1255666666654333322344555555443
No 355
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=22.19 E-value=43 Score=35.11 Aligned_cols=30 Identities=13% Similarity=0.253 Sum_probs=26.0
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
+....|..++++++.+-||++|+.+++|..
T Consensus 278 idp~~Gt~~df~~LV~~aH~~GI~VIlD~V 307 (645)
T 4aef_A 278 VARRLGGDRAFVDLLSELKRFDIKVILDGV 307 (645)
T ss_dssp ECGGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHhhhcCCEEEEEec
Confidence 344567888999999999999999999985
No 356
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=22.10 E-value=34 Score=32.25 Aligned_cols=61 Identities=5% Similarity=-0.001 Sum_probs=38.2
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+++|.+|.+.+++.++...+.|-.-.++.-+.++..+=..++-.++.+.+.+. .+++++
T Consensus 15 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (300)
T 3eb2_A 15 PVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVA 78 (300)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 5567899999999999988776663332233333333333445566677766654 355554
No 357
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=22.05 E-value=45 Score=35.26 Aligned_cols=30 Identities=10% Similarity=0.289 Sum_probs=26.0
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
.....|..++++++++-||++|+.+++|..
T Consensus 109 idp~~Gt~~dfk~Lv~~aH~~GikVilD~V 138 (683)
T 3bmv_A 109 TNPYFGSFTDFQNLINTAHAHNIKVIIDFA 138 (683)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 344568889999999999999999999974
No 358
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=21.86 E-value=58 Score=30.43 Aligned_cols=57 Identities=14% Similarity=0.133 Sum_probs=35.1
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc---cccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG---AFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG---~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+ +|.+|.+.+++.++...+.|-. .+++ .++|--+ ..+.-.++.+.+.+. .+++++
T Consensus 12 Pf~-dg~iD~~~l~~lv~~li~~Gv~--gl~~-~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 74 (294)
T 2ehh_A 12 PFK-EGEVDYEALGNLIEFHVDNGTD--AILV-CGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIA 74 (294)
T ss_dssp CEE-TTEECHHHHHHHHHHHHTTTCC--EEEE-SSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CcC-CCCcCHHHHHHHHHHHHHCCCC--EEEE-CccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 445 8999999999999887666532 3333 3333333 334456666766653 366653
No 359
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=21.85 E-value=3.6e+02 Score=23.80 Aligned_cols=42 Identities=12% Similarity=-0.008 Sum_probs=23.4
Q ss_pred cEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc
Q psy14299 66 NVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG 110 (448)
Q Consensus 66 ~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG 110 (448)
++..++.|- -|.+.+++.+++..+...+..+++-+.+....+
T Consensus 74 ~~~~~~~Dl---~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~ 115 (266)
T 3o38_A 74 RVEAVVCDV---TSTEAVDALITQTVEKAGRLDVLVNNAGLGGQT 115 (266)
T ss_dssp CEEEEECCT---TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred ceEEEEeCC---CCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCC
Confidence 466666542 266777777765443333455666666654444
No 360
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=21.61 E-value=35 Score=34.93 Aligned_cols=29 Identities=14% Similarity=0.311 Sum_probs=25.8
Q ss_pred CCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 106 TTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 106 ~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
....|..++++++++-||++|+.+++|..
T Consensus 72 dp~~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (543)
T 2zic_A 72 ADIFGNMADMDNLLTQAKMRGIKIIMDLV 100 (543)
T ss_dssp CGGGCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 44568889999999999999999999985
No 361
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=21.32 E-value=2.3e+02 Score=24.95 Aligned_cols=32 Identities=22% Similarity=-0.075 Sum_probs=19.1
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccc
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG 110 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG 110 (448)
|.+.+++.+++..+...+..+++-+.+....+
T Consensus 60 ~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~ 91 (245)
T 1uls_A 60 DPASVERGFAEALAHLGRLDGVVHYAGITRDN 91 (245)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 77888887765433333455666666654444
No 362
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=21.29 E-value=40 Score=35.74 Aligned_cols=29 Identities=14% Similarity=0.331 Sum_probs=25.6
Q ss_pred CCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 106 TTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 106 ~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
....|..++++++++-||++|+.+++|..
T Consensus 305 dp~~Gt~~df~~Lv~~aH~~GikVilD~V 333 (696)
T 4aee_A 305 DKYLGTMEDFEKLVQVLHSRKIKIVLDIT 333 (696)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEecc
Confidence 34567889999999999999999999985
No 363
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=21.29 E-value=48 Score=34.34 Aligned_cols=29 Identities=10% Similarity=0.029 Sum_probs=25.4
Q ss_pred CCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 106 TTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 106 ~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
....|..++++++++-||++|+.+++|..
T Consensus 81 d~~~Gt~~df~~lv~~~h~~Gi~VilD~V 109 (589)
T 3aj7_A 81 WPTYGTNEDCFALIEKTHKLGMKFITDLV 109 (589)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 34467888999999999999999999985
No 364
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=21.27 E-value=45 Score=34.91 Aligned_cols=30 Identities=20% Similarity=0.211 Sum_probs=25.9
Q ss_pred cCCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 105 GTTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 105 ~~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
+....|..++++++++-||++|+.+++|..
T Consensus 155 vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~V 184 (628)
T 1g5a_A 155 VNPALGTIGDLREVIAALHEAGISAVVDFI 184 (628)
T ss_dssp BCTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 344568888999999999999999999985
No 365
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=21.21 E-value=66 Score=28.27 Aligned_cols=49 Identities=10% Similarity=0.047 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHcCC--EEEEecccccc
Q psy14299 79 ICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKYDL--WMHVDACWGGS 138 (448)
Q Consensus 79 d~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~g~--~l~VD~A~~~~ 138 (448)
|+++|+++++. ....+++ .+|.+..++++.+.+|++|- .+|+|-..|.+
T Consensus 18 ~~~~l~~al~s------~~~~ifl-----l~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gls 68 (192)
T 3kts_A 18 NQKDMEKILEL------DLTYMVM-----LETHVAQLKALVKYAQAGGKKVLLHADLVNGLK 68 (192)
T ss_dssp SSHHHHHHTTS------SCCEEEE-----CSEETTTHHHHHHHHHHTTCEEEEEGGGEETCC
T ss_pred CHHHHHHHHcC------CCCEEEE-----ecCcHHHHHHHHHHHHHcCCeEEEecCchhccC
Confidence 78999999864 1334444 24677999999999999985 46777666654
No 366
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=21.21 E-value=4.3e+02 Score=23.74 Aligned_cols=92 Identities=11% Similarity=0.037 Sum_probs=47.5
Q ss_pred ccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCch---------HHHHHHHHhCCCCCcEEEEecC
Q psy14299 3 LKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHY---------SMLKAAHWLGIGMDNVIRVKTN 73 (448)
Q Consensus 3 ~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~---------s~~~~~~~~g~~~~~v~~v~~~ 73 (448)
...++++||+-++=.++...... + ...++++++.... ...+.....+. ++..+..|
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~-------~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D 73 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAA-------D-----GANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG---QALPIVGD 73 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHT-------T-----TCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTS---EEEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-------C-----CCEEEEEECChhhhhhhhHHHHHHHHHHHhcCC---cEEEEECC
Confidence 34577778776654443322221 1 2235555544331 22233333344 56666655
Q ss_pred CCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccc
Q psy14299 74 ERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAF 112 (448)
Q Consensus 74 ~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~ 112 (448)
.-|.+.+++.+++..+...+..+++-+++....+.+
T Consensus 74 ---v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 109 (285)
T 3sc4_A 74 ---IRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSI 109 (285)
T ss_dssp ---TTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCT
T ss_pred ---CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 237777877776544433345667777766555543
No 367
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=20.89 E-value=3.5e+02 Score=24.14 Aligned_cols=42 Identities=14% Similarity=0.047 Sum_probs=21.7
Q ss_pred cEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc
Q psy14299 66 NVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG 110 (448)
Q Consensus 66 ~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG 110 (448)
++..+..| .-|.+.+++.+++..+...+..+++-+++....+
T Consensus 78 ~~~~~~~D---v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~ 119 (280)
T 3pgx_A 78 KALTRVLD---VRDDAALRELVADGMEQFGRLDVVVANAGVLSWG 119 (280)
T ss_dssp CEEEEECC---TTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCB
T ss_pred eEEEEEcC---CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 45555544 2266666666665433323455566665554444
No 368
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=20.57 E-value=3e+02 Score=24.33 Aligned_cols=38 Identities=11% Similarity=-0.067 Sum_probs=19.5
Q ss_pred cEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccC
Q psy14299 66 NVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGT 106 (448)
Q Consensus 66 ~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~ 106 (448)
++..+..|- -|.+.+++.+++..+...++.+|+-+.+.
T Consensus 79 ~~~~~~~D~---~~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 79 EAESHACDL---SHSDAIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp EEEEEECCT---TCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred ceeEEEecC---CCHHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 455555441 26666666665533332344556655554
No 369
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=20.48 E-value=2.3e+02 Score=25.63 Aligned_cols=42 Identities=7% Similarity=0.007 Sum_probs=22.9
Q ss_pred cEEEEecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc
Q psy14299 66 NVIRVKTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG 110 (448)
Q Consensus 66 ~v~~v~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG 110 (448)
++..+..| .-|.+.+++.+++..+...+..+++-+.+....+
T Consensus 82 ~~~~~~~D---l~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~ 123 (276)
T 3r1i_A 82 KALPIRCD---VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQ 123 (276)
T ss_dssp CCEEEECC---TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCC
T ss_pred eEEEEEcC---CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 35555554 2267777777765433323455666666655444
No 370
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=20.40 E-value=46 Score=35.01 Aligned_cols=29 Identities=17% Similarity=0.198 Sum_probs=25.2
Q ss_pred CCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 106 TTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 106 ~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
....|..++++++++-||++|+.+++|..
T Consensus 149 dp~~Gt~~df~~Lv~~aH~~GI~VilD~V 177 (644)
T 3czg_A 149 EPSLGSNDDLVALTSRLREAGISLCADFV 177 (644)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 34467888999999999999999999985
No 371
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=20.37 E-value=4.4e+02 Score=23.13 Aligned_cols=91 Identities=11% Similarity=0.017 Sum_probs=45.4
Q ss_pred CccEEEeCcHHHHHHHHHHHHHHhcCCcccccCCCCCCCeEEEecCCCchHHHHHHHHh----CCCCCcEEEEecCCCCC
Q psy14299 2 NLKPFLLPGGSISNMYSICLARYRLDPDTKRKGLSHLPPLCMFTSEDSHYSMLKAAHWL----GIGMDNVIRVKTNERGQ 77 (448)
Q Consensus 2 ~~~g~~t~ggT~an~~al~~a~~~~~~~~~~~G~~~~~~~~Vl~~~~~H~s~~~~~~~~----g~~~~~v~~v~~~~~g~ 77 (448)
....++++||+-++=.++...... + ...+++++........+....+ +. ++..++.| .
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~-------~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~D---~ 64 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAA-------Q-----GADIVLNGFGDAAEIEKVRAGLAAQHGV---KVLYDGAD---L 64 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHH-------T-----TCEEEEECCSCHHHHHHHHHHHHHHHTS---CEEEECCC---T
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-------c-----CCEEEEEeCCcchHHHHHHHHHHhccCC---cEEEEECC---C
Confidence 345678888886654443322221 1 2235555544322133333222 43 46666554 2
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCCccc
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTTVLG 110 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG 110 (448)
-|.+.+++.+++..+...+...++-+.+....+
T Consensus 65 ~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~ 97 (260)
T 1x1t_A 65 SKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTA 97 (260)
T ss_dssp TSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 367788887765433323455666666654433
No 372
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=20.17 E-value=2.3e+02 Score=27.58 Aligned_cols=61 Identities=7% Similarity=-0.021 Sum_probs=43.0
Q ss_pred cCHHHHHHHHHHhhhcCCCcEEEEEeccCC--cc-c-cccCHHHHHHHHHHcCCEEEEeccccccc
Q psy14299 78 MICSFLEQTIQTSLAEKKIPLFVNATAGTT--VL-G-AFDPLDEIATVCEKYDLWMHVDACWGGSL 139 (448)
Q Consensus 78 id~e~Le~~l~~~~~~~~~~~lVv~~~~~t--~t-G-~~~~l~~I~~ia~~~g~~l~VD~A~~~~~ 139 (448)
.++++++.+++.....|. +.++++-.|++ ++ + ..-++..|..+.+..+.++++|-+|+.|.
T Consensus 260 ~t~~e~~~Ave~i~~~Gn-~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G~ 324 (385)
T 3nvt_A 260 ATIEEFIGAAEYIMSQGN-GKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTGR 324 (385)
T ss_dssp CCHHHHHHHHHHHHTTTC-CCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHCC
T ss_pred CCHHHHHHHHHHHHHcCC-CeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCCc
Confidence 689999999987666653 33444443232 22 1 23578889888888999999999998763
No 373
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=20.05 E-value=61 Score=30.51 Aligned_cols=60 Identities=15% Similarity=0.118 Sum_probs=36.0
Q ss_pred ecCCCCCcCHHHHHHHHHHhhhcCCCcEEEEEeccCCccccccCHHHHHHHHHHc---CCEEEE
Q psy14299 71 KTNERGQMICSFLEQTIQTSLAEKKIPLFVNATAGTTVLGAFDPLDEIATVCEKY---DLWMHV 131 (448)
Q Consensus 71 ~~~~~g~id~e~Le~~l~~~~~~~~~~~lVv~~~~~t~tG~~~~l~~I~~ia~~~---g~~l~V 131 (448)
|.+ ++.+|.+.+++.++...+.|-.-.++.-+.++..+=..+.-.++.+.+.+. .+++++
T Consensus 24 Pf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia 86 (306)
T 1o5k_A 24 PFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIV 86 (306)
T ss_dssp CEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 445 899999999999988766653322222233333333445566677766653 355553
No 374
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=20.02 E-value=44 Score=34.80 Aligned_cols=29 Identities=14% Similarity=0.196 Sum_probs=24.9
Q ss_pred CCccccccCHHHHHHHHHHcCCEEEEecc
Q psy14299 106 TTVLGAFDPLDEIATVCEKYDLWMHVDAC 134 (448)
Q Consensus 106 ~t~tG~~~~l~~I~~ia~~~g~~l~VD~A 134 (448)
+...|..++++++++-||++|+.+++|..
T Consensus 186 ~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V 214 (602)
T 2bhu_A 186 YAPYGRPEDLMALVDAAHRLGLGVFLDVV 214 (602)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 33457788999999999999999999974
Done!