Query psy14307
Match_columns 1235
No_of_seqs 157 out of 165
Neff 3.5
Searched_HMMs 46136
Date Fri Aug 16 16:29:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14307.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14307hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PHA03247 large tegument protei 99.0 2.3E-05 4.9E-10 103.7 47.8 24 141-164 2377-2411(3151)
2 PHA03247 large tegument protei 99.0 2.2E-05 4.8E-10 103.8 46.7 13 279-291 2471-2483(3151)
3 KOG3671|consensus 95.7 0.27 5.8E-06 59.1 16.0 8 39-46 66-73 (569)
4 KOG3671|consensus 94.2 1.5 3.2E-05 53.1 16.5 7 35-41 45-51 (569)
5 KOG1924|consensus 91.3 1.3 2.7E-05 56.0 11.0 8 18-25 88-95 (1102)
6 PTZ00491 major vault protein; 91.2 1.2 2.6E-05 56.7 11.0 153 759-915 241-423 (850)
7 PTZ00491 major vault protein; 80.6 14 0.00029 47.9 12.0 84 822-908 164-254 (850)
8 PTZ00449 104 kDa microneme/rho 70.6 28 0.0006 43.2 10.5 63 78-145 382-448 (943)
9 KOG1830|consensus 66.3 1.7E+02 0.0038 35.9 15.5 8 202-209 116-123 (518)
10 PHA03378 EBNA-3B; Provisional 65.7 1.3E+02 0.0028 38.7 14.8 135 537-674 672-806 (991)
11 PTZ00449 104 kDa microneme/rho 63.7 39 0.00085 42.0 9.9 23 353-375 647-670 (943)
12 PRK14950 DNA polymerase III su 60.3 47 0.001 41.4 10.2 11 123-133 53-63 (585)
13 PRK12323 DNA polymerase III su 59.5 2E+02 0.0043 37.3 15.3 11 727-737 603-613 (700)
14 PRK07764 DNA polymerase III su 38.7 2.7E+02 0.0058 36.7 12.3 113 573-686 392-504 (824)
15 KOG0566|consensus 32.8 8.7E+02 0.019 33.0 15.0 15 10-24 487-501 (1080)
16 KOG1923|consensus 29.3 1.9E+02 0.004 37.8 8.4 7 937-943 698-704 (830)
17 PF05387 Chorion_3: Chorion fa 20.1 1.3E+02 0.0029 34.4 4.4 68 871-949 147-217 (277)
No 1
>PHA03247 large tegument protein UL36; Provisional
Probab=98.97 E-value=2.3e-05 Score=103.71 Aligned_cols=24 Identities=17% Similarity=-0.017 Sum_probs=16.4
Q ss_pred hhhhcccccccc-----------cccCccceeece
Q psy14307 141 QQKETANVNSAD-----------LVNNRENVVKPV 164 (1235)
Q Consensus 141 q~~~~~~v~~~~-----------~~~~~~~~~k~~ 164 (1235)
||+|-+=-|.++ |+|.+-+.+|+-
T Consensus 2377 ~QLe~LSaLiAsKPLa~aPPCLvlvD~~m~p~~VL 2411 (3151)
T PHA03247 2377 AQLPALSALIAARPLARSPPCLVLVDISMAPLFVL 2411 (3151)
T ss_pred HHHHHHHHHHhcCcccCCCCeEEEEcCCCceeEEe
Confidence 777766655555 777777777764
No 2
>PHA03247 large tegument protein UL36; Provisional
Probab=98.95 E-value=2.2e-05 Score=103.81 Aligned_cols=13 Identities=31% Similarity=0.503 Sum_probs=5.9
Q ss_pred CCCCCCCCCCCCC
Q psy14307 279 DLKKPGEPEVQTP 291 (1235)
Q Consensus 279 ~~~kp~~pKdqgP 291 (1235)
+.++++.+-.+.+
T Consensus 2471 ~~~y~~~p~f~~~ 2483 (3151)
T PHA03247 2471 GELFPGAPVYRRP 2483 (3151)
T ss_pred cccCCCCccccCC
Confidence 3444455444443
No 3
>KOG3671|consensus
Probab=95.72 E-value=0.27 Score=59.11 Aligned_cols=8 Identities=13% Similarity=0.069 Sum_probs=4.6
Q ss_pred eeeccccc
Q psy14307 39 VAYGTDIT 46 (1235)
Q Consensus 39 ~~~~~~~~ 46 (1235)
.|+++|..
T Consensus 66 l~lVkD~~ 73 (569)
T KOG3671|consen 66 LCLVKDNA 73 (569)
T ss_pred EEEeeccc
Confidence 46666653
No 4
>KOG3671|consensus
Probab=94.20 E-value=1.5 Score=53.14 Aligned_cols=7 Identities=71% Similarity=1.004 Sum_probs=3.3
Q ss_pred cceeeee
Q psy14307 35 VQTYVAY 41 (1235)
Q Consensus 35 ~~~~~~~ 41 (1235)
||.|++|
T Consensus 45 VqLY~a~ 51 (569)
T KOG3671|consen 45 VQLYKAY 51 (569)
T ss_pred HHHHhhc
Confidence 4444444
No 5
>KOG1924|consensus
Probab=91.29 E-value=1.3 Score=55.98 Aligned_cols=8 Identities=50% Similarity=0.646 Sum_probs=2.9
Q ss_pred hhhhhhcc
Q psy14307 18 FLKPFLLM 25 (1235)
Q Consensus 18 ~~~~~l~~ 25 (1235)
++.+|++|
T Consensus 88 ~~~~F~~~ 95 (1102)
T KOG1924|consen 88 VLELFELM 95 (1102)
T ss_pred HHHHHHHH
Confidence 33333333
No 6
>PTZ00491 major vault protein; Provisional
Probab=91.21 E-value=1.2 Score=56.75 Aligned_cols=153 Identities=14% Similarity=0.166 Sum_probs=70.4
Q ss_pred cccccccceeccCC--CcccccCCCceeeccCCceeecCCcceeecC------------------CCceeecCCCceee-
Q psy14307 759 VLLDKKERVLLDKK--EPVLLDKKEPVLLDKKEHVLLDKKETVLLDK------------------KEPVLLDKKEPILL- 817 (1235)
Q Consensus 759 vV~de~E~Vv~de~--E~vv~deke~vv~~e~e~Vml~e~e~vv~~~------------------~e~v~l~~~ep~vl- 817 (1235)
+.+..|+..|++-. +.++.+-.+-|+. ..+.+.|++.++++..+ .+..||.-||-|.-
T Consensus 241 v~RkaGerWLVtg~d~~~yIP~v~eeVv~-~r~~i~L~~~qyc~V~dPv~~~G~~~tG~~r~v~G~~SffLqpgEeL~~~ 319 (850)
T PTZ00491 241 IARKAGEEWLVTHEDCPTHIPDVYEKLVA-TVNATHLSARQYCVILNPVGDDGHNRFGAKELRKGECSFFLQPGESLEGD 319 (850)
T ss_pred EEeecCCeeEEeCCCccccCCCCceEEee-eEeeEEecCCceEEEECCccccCccccccEEEEecCccccCCCCCeeecC
Confidence 44444555555433 3444444444442 23455555555554444 25555555555544
Q ss_pred cCCCCeeecCCCCeEeccCCCeEeccCCceeecCCCceEecCC-------CceEecCCCCeeecCCCceeecC-CCC-ee
Q psy14307 818 DKKEPVLLDKKEPVLLDKKSPVLLDKKGPVILDKKEPVLLDKK-------EPVLLDKKEPVLLDKKAPVLLDK-KEP-VL 888 (1235)
Q Consensus 818 ~~~~~Vvl~~k~pvvl~~k~~vvl~~k~p~v~e~~~~vvl~~k-------~pvv~~~~~~Vvl~~k~pvv~~~-k~~-Vv 888 (1235)
..-.+.||.+.++|++.+..+..=+ +.+.++.|.--|++-. .--|+..+..+.++..++|-+.+ +.+ |=
T Consensus 320 ki~~a~VL~e~EaLLl~A~~~f~d~--~gv~r~~Gdrwlv~GP~~YIP~~~v~VV~~R~aI~l~~NegVyVrD~kTgkvR 397 (850)
T PTZ00491 320 GIQDAYVLGEDEALLLRALETFTDE--DGVEREPGDRWLVHGPCEYIPPVLVEVVERRRRIPLDENEGIYVRNITTGEVR 397 (850)
T ss_pred CccCceecCCcceeeeeeccccccc--cceeccCCceecccCCcccCCCCcEEEEEecccEecCCCCEEEEEECCCCcEE
Confidence 3333455555555555554332211 2255555555555521 12223334444455555543333 221 11
Q ss_pred ccCCCceeecCCCceeeccCCchhhhh
Q psy14307 889 LDKKEPVLLDKKEPVLLDKKEPILFEK 915 (1235)
Q Consensus 889 l~~~~p~m~d~~~~v~l~~k~p~l~~~ 915 (1235)
+-.|..|||...+-+.--.. |-.+++
T Consensus 398 vV~Gp~yML~pdEe~weK~l-p~~ve~ 423 (850)
T PTZ00491 398 AVHGKPYMLGAHEELWEKPL-PPNVEE 423 (850)
T ss_pred EEECCcccCCCCcEEEeccC-CHHHHH
Confidence 22345777777774443333 334443
No 7
>PTZ00491 major vault protein; Provisional
Probab=80.62 E-value=14 Score=47.89 Aligned_cols=84 Identities=17% Similarity=0.090 Sum_probs=36.6
Q ss_pred CeeecCCCCeEeccCCCeEeccCCceeecCCCceEecCCCceEecCCCCe-------eecCCCceeecCCCCeeccCCCc
Q psy14307 822 PVLLDKKEPVLLDKKSPVLLDKKGPVILDKKEPVLLDKKEPVLLDKKEPV-------LLDKKAPVLLDKKEPVLLDKKEP 894 (1235)
Q Consensus 822 ~Vvl~~k~pvvl~~k~~vvl~~k~p~v~e~~~~vvl~~k~pvv~~~~~~V-------vl~~k~pvv~~~k~~Vvl~~~~p 894 (1235)
+++|..+.++-|.+..... +..++.|.+|+--|+..-|.++.+.-|-| ||..++++++.+.....=..| .
T Consensus 164 A~vI~~nqAL~LrA~~~F~--D~~G~~R~aGEEWLVt~~gaylP~v~Eevv~~V~a~VLse~eAL~LrA~~~F~D~~g-~ 240 (850)
T PTZ00491 164 AVLIKPNQALKLRALETFT--DRDGVPRVAGEEWLVRTPGAYLPGVFEEVVGVVKGIVLSDKEALHLRALRTFTDVYG-G 240 (850)
T ss_pred EEEecCCcEEEEEEeeeEE--CCCCCEeecCCEEEEeccccccCCCcceEEEEEEEEEecCCcEEEEEEeeeEEcCCC-C
Confidence 4444444444444443221 12344555565555555555554443332 233333333333333211122 3
Q ss_pred eeecCCCceeeccC
Q psy14307 895 VLLDKKEPVLLDKK 908 (1235)
Q Consensus 895 ~m~d~~~~v~l~~k 908 (1235)
+-+.+|.--||+..
T Consensus 241 v~RkaGerWLVtg~ 254 (850)
T PTZ00491 241 IARKAGEEWLVTHE 254 (850)
T ss_pred EEeecCCeeEEeCC
Confidence 55555555555443
No 8
>PTZ00449 104 kDa microneme/rhoptry antigen; Provisional
Probab=70.60 E-value=28 Score=43.23 Aligned_cols=63 Identities=17% Similarity=0.260 Sum_probs=31.7
Q ss_pred cccceeccCCccccccCCCCCCCCCCCCCCCCCCCCCcccCCCchhHHHHHHH----hhhHHHHHHHhhhhc
Q psy14307 78 SHGNILETKPPNLLQQNKSHENIPENSETPTPNLDGTGQLNDNNKSVIKWFLE----NVECLLDYLVQQKET 145 (1235)
Q Consensus 78 ~~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~~~~~~~q~~~~ 145 (1235)
+.++.+.-+++|..--- |+++--.-+|+++.-|-.- .-||.+ |-|.-+ -++|.|-|.-.|--.
T Consensus 382 ldv~f~sdkdl~v~~lt--n~~l~y~mvtpkphrdii~-v~dgse--vlwyyegl~n~lvc~wiyvs~g~~~ 448 (943)
T PTZ00449 382 LDVMFISDKDLNVAALT--NADLEYFMVTPKPHRDIII-VFDGSE--VLWYYEGLDNFLVCAWIYVSDGAAR 448 (943)
T ss_pred eeeEEeecccceeeecc--cCceeeEEecCCCCcceEE-EecCcE--EEEeeccccceeEEEEEEecCCchh
Confidence 34455555555554433 3444444566666544321 223333 335433 468999887655433
No 9
>KOG1830|consensus
Probab=66.34 E-value=1.7e+02 Score=35.87 Aligned_cols=8 Identities=50% Similarity=0.630 Sum_probs=3.1
Q ss_pred CCchhhhc
Q psy14307 202 TNPTEVAE 209 (1235)
Q Consensus 202 ~~~~~~~~ 209 (1235)
|-|+-+.|
T Consensus 116 tlP~pl~e 123 (518)
T KOG1830|consen 116 TLPTPLTE 123 (518)
T ss_pred cCCchHHH
Confidence 33444333
No 10
>PHA03378 EBNA-3B; Provisional
Probab=65.66 E-value=1.3e+02 Score=38.74 Aligned_cols=135 Identities=24% Similarity=0.427 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy14307 537 LLLPPKPKPELLLPPKPEPEKLLLPPKPKPKLLLPPKPESELLLPPKPEPELIIPPKPEPEILIPPKPEPELLLPPKPEP 616 (1235)
Q Consensus 537 ~p~~P~P~p~~p~pP~Pe~~~v~~pP~p~p~~~~pPaPe~p~~~pP~Pep~~p~~PaPEpe~~~~P~Pepe~p~~PaPe~ 616 (1235)
.+.-|.+.-..-.=++.-++--.-+|+.-|-.-.+|+..+-.-.+|...+-...+|++.+-....|+..+-.-.+|+..+
T Consensus 672 i~~~p~~~~~~~~~~~~~ap~~~~pP~~aP~p~~pPa~~P~~~qpP~~ap~p~~PPa~tP~~~~~Pa~aP~p~~PPa~aP 751 (991)
T PHA03378 672 IPYQPSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAP 751 (991)
T ss_pred cCCCCCCCCcccccccccCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCC
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCC
Q psy14307 617 EILLPPKPEPELLLPPKPEPEILLPPKPEPELLLPPKPESELLLPLKPEPEILLPPKP 674 (1235)
Q Consensus 617 ~~~~~P~p~p~~~~~P~Pe~~~~~aP~P~~~~~~pP~Pe~~~~aaP~pepe~~~~P~P 674 (1235)
-.--.|...+-.--+|++.+ -+|.|-+++-.+|++.--.-.+|.|-+++-..|++
T Consensus 752 ~~~~~P~~AP~~~~PPa~tP---gaptP~~pPq~~P~~~Qrp~gaPtP~ppPQ~~P~~ 806 (991)
T PHA03378 752 GRARPPAAAPGRARPPAAAP---GAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTS 806 (991)
T ss_pred ccccCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCcc
No 11
>PTZ00449 104 kDa microneme/rhoptry antigen; Provisional
Probab=63.72 E-value=39 Score=42.01 Aligned_cols=23 Identities=30% Similarity=0.486 Sum_probs=13.9
Q ss_pred CCCCCCCCCCCCCC-CCCCCCCCC
Q psy14307 353 KPQLPEDPEPTKPQ-LPEVPEPTK 375 (1235)
Q Consensus 353 KdQgPvvPepvKdQ-gP~VPE~vK 375 (1235)
..++|.+++++|.- .|.+|.-+|
T Consensus 647 RPEsPKiPesPK~PkSPKpP~dPK 670 (943)
T PTZ00449 647 RPEGPKIIKSPKPPKSPKPPFDPK 670 (943)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCc
Confidence 34566666666655 666665554
No 12
>PRK14950 DNA polymerase III subunits gamma and tau; Provisional
Probab=60.32 E-value=47 Score=41.35 Aligned_cols=11 Identities=18% Similarity=0.253 Sum_probs=4.3
Q ss_pred hHHHHHHHhhh
Q psy14307 123 SVIKWFLENVE 133 (1235)
Q Consensus 123 ~~i~~~~~~~~ 133 (1235)
++++.|+..+.
T Consensus 53 tlA~~lA~~l~ 63 (585)
T PRK14950 53 STARILAKAVN 63 (585)
T ss_pred HHHHHHHHHhc
Confidence 33344433333
No 13
>PRK12323 DNA polymerase III subunits gamma and tau; Provisional
Probab=59.55 E-value=2e+02 Score=37.29 Aligned_cols=11 Identities=18% Similarity=0.045 Sum_probs=4.6
Q ss_pred ccccCCCceec
Q psy14307 727 VLLDKKEPVLL 737 (1235)
Q Consensus 727 VV~~k~E~Vvl 737 (1235)
++.-+|+.++|
T Consensus 603 l~~~~~~~~~l 613 (700)
T PRK12323 603 LAGVEGDTVRL 613 (700)
T ss_pred hheecCceeEE
Confidence 33444444443
No 14
>PRK07764 DNA polymerase III subunits gamma and tau; Validated
Probab=38.72 E-value=2.7e+02 Score=36.74 Aligned_cols=113 Identities=14% Similarity=0.175 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy14307 573 KPESELLLPPKPEPELIIPPKPEPEILIPPKPEPELLLPPKPEPEILLPPKPEPELLLPPKPEPEILLPPKPEPELLLPP 652 (1235)
Q Consensus 573 aPe~p~~~pP~Pep~~p~~PaPEpe~~~~P~Pepe~p~~PaPe~~~~~~P~p~p~~~~~P~Pe~~~~~aP~P~~~~~~pP 652 (1235)
........+....+..+.++...+...+...+.+.....+++.+....++.+....+.. ...+.....+.+...+.+.+
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 470 (824)
T PRK07764 392 GAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPA-GGAPSPPPAAAPSAQPAPAP 470 (824)
T ss_pred CCCcCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccc-ccccCCCCCCCCCCCCCCCC
Q ss_pred CCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy14307 653 KPESELLLPLKPEPEILLPPKPEPELLLPPKPEP 686 (1235)
Q Consensus 653 ~Pe~~~~aaP~pepe~~~~P~PEpe~~a~P~pe~ 686 (1235)
.......+++.+.+....++...+..++.+....
T Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (824)
T PRK07764 471 AAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPA 504 (824)
T ss_pred CCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCC
No 15
>KOG0566|consensus
Probab=32.76 E-value=8.7e+02 Score=33.03 Aligned_cols=15 Identities=13% Similarity=0.188 Sum_probs=9.5
Q ss_pred HHHHHHHHhhhhhhc
Q psy14307 10 YLVLVRQQFLKPFLL 24 (1235)
Q Consensus 10 ~~~~~~~~~~~~~l~ 24 (1235)
|.-.-.|+-+.+||.
T Consensus 487 f~D~~kQeaIdlLLg 501 (1080)
T KOG0566|consen 487 FMDKEKQEAIDLLLG 501 (1080)
T ss_pred ccchhhHHHHHHHHh
Confidence 444456777777776
No 16
>KOG1923|consensus
Probab=29.30 E-value=1.9e+02 Score=37.84 Aligned_cols=7 Identities=29% Similarity=0.515 Sum_probs=3.9
Q ss_pred CCCcccc
Q psy14307 937 DEPIFFN 943 (1235)
Q Consensus 937 ~~~~~~~ 943 (1235)
+--+||.
T Consensus 698 ~~~~y~G 704 (830)
T KOG1923|consen 698 DVVEYFG 704 (830)
T ss_pred hHhHhhC
Confidence 3445666
No 17
>PF05387 Chorion_3: Chorion family 3; InterPro: IPR008449 This family consists Drosophila chorion proteins S36 and S38, which are involved in chorion membrane formation. The proteins consist of a central domain and two flanking 'arms'. The central domain contains tandemly repetitive peptides, which apparently generate a secondary structure of beta-sheet strands alternating with beta-turns, most probably, forming a twisted beta-pleated sheet or beta-barrel [].
Probab=20.10 E-value=1.3e+02 Score=34.44 Aligned_cols=68 Identities=18% Similarity=0.559 Sum_probs=34.6
Q ss_pred eeecCC-CceeecCC--CCeeccCCCceeecCCCceeeccCCchhhhhhhhccccCCceeecCCCCCCCCCCccccCCCC
Q psy14307 871 VLLDKK-APVLLDKK--EPVLLDKKEPVLLDKKEPVLLDKKEPILFEKAALKVQTKPEVFKVPPKDKDEDEPIFFNEPKS 947 (1235)
Q Consensus 871 Vvl~~k-~pvv~~~k--~~Vvl~~~~p~m~d~~~~v~l~~k~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 947 (1235)
|++++- .|+++++- ++-+|..+.|+++. +-+|+++.+.-+++++--+|- .|.-++ -||+|.|-=|.
T Consensus 147 ii~~~Pl~PIIV~~P~~P~~~~~~~Pp~VVk-~~PVi~~~~Psvi~~q~~i~~--~P~p~~--------~~PVyV~V~KP 215 (277)
T PF05387_consen 147 IIIHQPLPPIIVHQPGAPPKVLNNHPPLVVK-PAPVIYHIKPSVIYQQEYINH--HPRPLS--------LNPVYVNVYKP 215 (277)
T ss_pred EEEecCCCCeEecCCCCCchhhcCCCCeeec-CCceEEecCcceeehhhHhhc--CCCccc--------ccceEEEeecC
Confidence 444444 55555555 55555555555553 335556666555555544331 122222 25777776665
Q ss_pred CC
Q psy14307 948 PP 949 (1235)
Q Consensus 948 ~~ 949 (1235)
+-
T Consensus 216 ~~ 217 (277)
T PF05387_consen 216 PK 217 (277)
T ss_pred cc
Confidence 44
Done!