Query psy14307
Match_columns 1235
No_of_seqs 157 out of 165
Neff 3.5
Searched_HMMs 29240
Date Fri Aug 16 16:30:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14307.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14307hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zuo_A MVP, major vault protei 96.0 0.052 1.8E-06 66.7 14.0 210 698-911 30-257 (861)
2 2zuo_A MVP, major vault protei 95.1 0.066 2.2E-06 65.9 10.8 110 805-915 306-425 (861)
3 3gnf_B MVP, major vault protei 88.8 0.81 2.8E-05 52.5 8.1 205 698-908 34-258 (387)
4 3gnf_B MVP, major vault protei 64.4 17 0.00057 42.0 8.7 10 719-728 39-48 (387)
5 1v1h_A Fibritin, fiber protein 16.6 5.1E+02 0.017 25.1 8.4 19 830-848 54-72 (103)
6 3izo_F Fiber; pentameric pento 12.7 1.8E+03 0.062 26.8 13.8 78 698-778 57-138 (581)
7 3vwc_A Serine protease inhibit 10.6 1.1E+02 0.0036 31.4 2.0 20 1010-1029 2-21 (149)
8 2bib_A CBPE, teichoic acid pho 9.6 4.6E+02 0.016 30.3 7.0 10 923-932 220-229 (547)
9 1v1h_A Fibritin, fiber protein 7.2 1.5E+03 0.051 21.9 8.2 24 842-865 50-73 (103)
10 3h0g_A DNA-directed RNA polyme 6.2 1.1E+02 0.0039 41.3 0.0 165 513-678 1587-1751(1752)
No 1
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A
Probab=95.97 E-value=0.052 Score=66.73 Aligned_cols=210 Identities=18% Similarity=0.152 Sum_probs=126.2
Q ss_pred ccccccccCCCCcccccCCcccccccCCcccccCCCceeccCCCcccccCCCcccccCCCccccccccceeccCCCcccc
Q psy14307 698 TTTKTLLLDKKEPVLLDKKEPVLLDKKEPVLLDKKEPVLLDKKEPVLLDEKEPVLLDKKEPVLLDKKERVLLDKKEPVLL 777 (1235)
Q Consensus 698 ~tpk~dlLdk~EaVV~~e~e~vvl~esE~VV~~k~E~VvldE~e~Vv~dE~E~Vvlde~E~vV~de~E~Vv~de~E~vv~ 777 (1235)
.-|+|+.++.+|.++...-.-++..-+.+.+ =..+|+.++...++.|+..+|.+.-|+.=++-..+..-|--||.++.
T Consensus 30 ~GP~t~~~q~~E~v~~~P~~mi~vPp~~YCi--I~NPv~r~~~g~~v~d~~gq~klr~g~~EiR~~q~pFPLyPgE~l~~ 107 (861)
T 2zuo_A 30 VGPKTYIRQDNERVLFAPVRMVTVPPRHYCI--VANPVSRDTQSSVLFDITGQVRLRHADQEIRLAQDPFPLYPGEVLEK 107 (861)
T ss_dssp CCSCCBCCSSCBCCSCSSSCCBCCCCCCCCC--CSSTTCEEEECCCCSCCSSCCCCSSSSEEEECTTCCCCCCSCCCSCC
T ss_pred ECCeEEEeccCcccccCCceeEEeCCCceEE--EeCceeecCCCCeeeccCCceeecccceeeeccCCCCCCCCCccccc
Confidence 4578999999999887766666666666665 23556666666666666666666666555555555555555555533
Q ss_pred cCCCceeeccCCceee------cCCcceeecCCCceeecCCCceeecCCCCeeecCCCCeEeccCCCeEec------cCC
Q psy14307 778 DKKEPVLLDKKEHVLL------DKKETVLLDKKEPVLLDKKEPILLDKKEPVLLDKKEPVLLDKKSPVLLD------KKG 845 (1235)
Q Consensus 778 deke~vv~~e~e~Vml------~e~e~vv~~~~e~v~l~~~ep~vl~~~~~Vvl~~k~pvvl~~k~~vvl~------~k~ 845 (1235)
.=..--++....++.| .+..++.+.+|+=.|+++=+.|+-...+-|+ +.=.++||..++++-|. +..
T Consensus 108 ~v~~L~VI~~N~ALrLrAl~df~D~~g~~R~AGEeWLv~gPGtY~P~veEeVv-e~v~A~vl~~n~AL~LrA~~~f~D~~ 186 (861)
T 2zuo_A 108 DITPLQVVLPNTALHLKALLDFEDKNGDKVMAGDEWLFEGPGTYIPQKEVEVV-EIIQATVIKQNQALRLRARKECFDRE 186 (861)
T ss_dssp CCCCCCCCGGGCCEEEBCSSCSSCSSSSCCCTTCBCCBCSSCCCCSSSCCEEE-ECCCCCCCGGGCCEEECCCSSCCCTT
T ss_pred CceeeeEecCCceEEEEEeeeEEcCCCcEeecCCEEEEECCceecCCCceEEE-EEEEEEEecCCcEEEEEEeeeEEcCC
Confidence 2222223444444433 1345667777776666655555544433332 23335555555555553 334
Q ss_pred ceeecCCCceEecCCCceEecCCCCeeecCCCceeecCCCCeecc------CCCceeecCCCceeeccCCch
Q psy14307 846 PVILDKKEPVLLDKKEPVLLDKKEPVLLDKKAPVLLDKKEPVLLD------KKEPVLLDKKEPVLLDKKEPI 911 (1235)
Q Consensus 846 p~v~e~~~~vvl~~k~pvv~~~~~~Vvl~~k~pvv~~~k~~Vvl~------~~~p~m~d~~~~v~l~~k~p~ 911 (1235)
++.|..|+--|+..-|+++.+.-|-|+ +...++||..+++++|- +.-.+.+.+|.--||+..++-
T Consensus 187 G~~R~aGEEWLVt~~gayiP~v~Eevv-~~V~a~VLte~eAL~LrA~~~F~D~~gv~RkaGe~WLVT~~gp~ 257 (861)
T 2zuo_A 187 GKGRVTGEEWLVRSVGAYLPAVFEEVL-DLVDAVILTEKTALHLRALQNFRDLRGVLHRTGEEWLVTVQDTE 257 (861)
T ss_dssp SSCCCTTCCCCBCSSSCCCCTTCCEEE-ECCCCCCCCTTCEEEEECCSSCBCTTCCBCCTTCEEEECSSCCC
T ss_pred CcCccCCCeEEEeccceecCCCceEEE-EEEeeEEecCCcEEEEEEeeeeccccCceecCCCEEEEecCCcc
Confidence 666888888888887888888777665 44466666666666655 334556777777777655543
No 2
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A
Probab=95.15 E-value=0.066 Score=65.88 Aligned_cols=110 Identities=15% Similarity=0.198 Sum_probs=54.3
Q ss_pred CceeecCCCceeecCCCCeeecCCCCeEeccCCCeEecc-CCceeecCCCceEec-------CCCceEecCCCCeeecCC
Q psy14307 805 EPVLLDKKEPILLDKKEPVLLDKKEPVLLDKKSPVLLDK-KGPVILDKKEPVLLD-------KKEPVLLDKKEPVLLDKK 876 (1235)
Q Consensus 805 e~v~l~~~ep~vl~~~~~Vvl~~k~pvvl~~k~~vvl~~-k~p~v~e~~~~vvl~-------~k~pvv~~~~~~Vvl~~k 876 (1235)
+..||.-||-|+-.-....+|.+.++|+|.+.+..--.. +..+-+..|.=-||+ ...--|++.+..+.|+..
T Consensus 306 ~SffL~PgE~L~~gIq~v~VL~e~EaLlLrAle~f~d~~~~~~v~Rk~GdrWlI~GP~eYIP~~eveVve~R~AI~Lden 385 (861)
T 2zuo_A 306 KSFFLQPGERLERGIQDVYVLSEQQGLLLKALQPLEEGESEEKVSHQAGDCWLIRGPLEYVPSAKVEVVEERQAIPLDQN 385 (861)
T ss_dssp EEECCCTTCEESSSSCBCEECCEEEEEEEEEESSCBSSCSTTCCCBCTTCCEEEEESCEECCCTTEEEEEEEECBCCCTT
T ss_pred ccccCCCCcchhccceeeEEeCCCcEEEEEEeccccccccccceeeCCCcEEEEeCCeeeCCCCcEEEEEEEEeEEeCCC
Confidence 444555555554333334455555555555433211111 123344444333333 233335566667777777
Q ss_pred Cc-eeecCCCCe-eccCCCceeecCCCceeeccCCchhhhh
Q psy14307 877 AP-VLLDKKEPV-LLDKKEPVLLDKKEPVLLDKKEPILFEK 915 (1235)
Q Consensus 877 ~p-vv~~~k~~V-vl~~~~p~m~d~~~~v~l~~k~p~l~~~ 915 (1235)
++ +|++.+-|. =+-.|+.+|+.+.+-+. ...-|-.+++
T Consensus 386 EgIYVrd~kTG~VR~V~G~~YmL~~~Eelw-eK~lp~~ve~ 425 (861)
T 2zuo_A 386 EGIYVQDVKTGKVRAVIGSTYMLTQDEVLW-EKELPSGVEE 425 (861)
T ss_dssp CEEEEEETTTCCEEEEESSCBCCCTTEEEC-CCCCTTHHHH
T ss_pred ceEEEEEcCCccEEEEeccEEecCCCceEE-EEECCHHHHH
Confidence 77 455555533 34457889998876443 3333444443
No 3
>3gnf_B MVP, major vault protein; beta sheets, phosphoprotein, ribonucleoprotein, structural P; 2.10A {Mus musculus} PDB: 3gf5_A 3gng_A 1y7x_A
Probab=88.84 E-value=0.81 Score=52.49 Aligned_cols=205 Identities=17% Similarity=0.153 Sum_probs=94.2
Q ss_pred ccccccccCCCCcccccCCcccccccCCcccccCCCceeccCCCcccccCCCcccccCCCccccccccceeccCCCcccc
Q psy14307 698 TTTKTLLLDKKEPVLLDKKEPVLLDKKEPVLLDKKEPVLLDKKEPVLLDEKEPVLLDKKEPVLLDKKERVLLDKKEPVLL 777 (1235)
Q Consensus 698 ~tpk~dlLdk~EaVV~~e~e~vvl~esE~VV~~k~E~VvldE~e~Vv~dE~E~Vvlde~E~vV~de~E~Vv~de~E~vv~ 777 (1235)
.-|+|+.++.+|.++...-.-++...+...+-. .+++.++...+++|+..+|.+.-|+.=++-..+..-|.-||.|+.
T Consensus 34 ~GP~t~~~~~he~v~~~p~~~i~vpp~~YC~V~--NPv~r~~~g~~~~d~~gqv~lr~G~~EiR~~q~pFPLyPgE~l~~ 111 (387)
T 3gnf_B 34 VGPKTYIRQDNERVLFAPVRMVTVPPRHYCIVA--NPVSRDAQSSVLFDVTGQVRLRHADQEIRLAQDPFPLYPGELLEK 111 (387)
T ss_dssp ESSEEEECCTTEEECSSCEECEEECTTEEEEEE--SCBCBCTTSCBCBCSSSCBCBCTTCEEEECSEEEECCCTTCEEEE
T ss_pred ECCeEeEhhhccccccCCceeEEcCCCCEEEEe--CCeeeCCCCCEeecCCCcEEEccccEEEEcCCCCCCCCCCcEeee
Confidence 347788888888887554444444444433322 233333333444444444444433333332223333333333321
Q ss_pred cCCCceeeccCCceeec------CCcceeecCCCceeecC-------CCceeecCCCCeeecCCCCeEeccCCCeEeccC
Q psy14307 778 DKKEPVLLDKKEHVLLD------KKETVLLDKKEPVLLDK-------KEPILLDKKEPVLLDKKEPVLLDKKSPVLLDKK 844 (1235)
Q Consensus 778 deke~vv~~e~e~Vml~------e~e~vv~~~~e~v~l~~-------~ep~vl~~~~~Vvl~~k~pvvl~~k~~vvl~~k 844 (1235)
.-..--++...+++.|+ +..++.|-+|+=-|+++ .+-.|++.-.+++|..+.+|-|.+.... .|.
T Consensus 112 ~v~~l~vi~~n~AL~LrAl~df~d~~g~~RvaGeeWLv~gPg~Y~P~veeeV~~~v~A~vl~~n~AL~LrA~~~F-~D~- 189 (387)
T 3gnf_B 112 DITPLQVVLPNTALHLKALLDFEDKNGDKVMAGDEWLFEGPGTYIPQKEVEVVEIIQATVIKQNQALRLRARKEC-FDR- 189 (387)
T ss_dssp EEEECEEECTTEEEEEEESSCEECTTSCEECTTCEEEEESSEEECCCTTEEEEEEEECEEECTTEEEEEEESSSE-ECT-
T ss_pred cccceEEECCCCeEEEEEecceEcCCCCEeccCCEEEEeCCEeecCCCcEEEecccccEEecCCceEEEEEEeeE-ECC-
Confidence 11100022222222222 22333344443333332 2333444444666666666666666543 222
Q ss_pred CceeecCCCceEecCCCceEecCCC-------CeeecCCCceeecCCCCeeccCCCceeecCCCceeeccC
Q psy14307 845 GPVILDKKEPVLLDKKEPVLLDKKE-------PVLLDKKAPVLLDKKEPVLLDKKEPVLLDKKEPVLLDKK 908 (1235)
Q Consensus 845 ~p~v~e~~~~vvl~~k~pvv~~~~~-------~Vvl~~k~pvv~~~k~~Vvl~~~~p~m~d~~~~v~l~~k 908 (1235)
..+.|.+|+--|+..-|+++-+.-| +.+|..++++.+.+.....=..| +.+.+|.--||+..
T Consensus 190 ~G~~R~aGEEWLv~~~gaYiP~v~EeVv~~v~a~VL~e~eAL~LrA~~~F~D~~G--~~Rk~GeeWLvt~~ 258 (387)
T 3gnf_B 190 DGKERVTGEEWLVRSVGAYLPAVFEEVLDLVDAVILTEKTALHLRARQNFKDLRG--VAHRTGEEWLVTVQ 258 (387)
T ss_dssp TCCEECTTCEEEECCCEEECCCTTEEEEEEEECEECCTTEEEEEEESSCEECTTS--CEECTTCEEEEETT
T ss_pred CCCEeecCcEEEEecCceEcCCCceEEEEEEEeEEeCCCcEEEEEEeeeeEcCCC--cCcCCCCeeEEeeC
Confidence 3455777777777666666655543 34444444444444443322222 34666666666653
No 4
>3gnf_B MVP, major vault protein; beta sheets, phosphoprotein, ribonucleoprotein, structural P; 2.10A {Mus musculus} PDB: 3gf5_A 3gng_A 1y7x_A
Probab=64.43 E-value=17 Score=41.96 Aligned_cols=10 Identities=30% Similarity=0.395 Sum_probs=4.2
Q ss_pred cccccCCccc
Q psy14307 719 VLLDKKEPVL 728 (1235)
Q Consensus 719 vvl~esE~VV 728 (1235)
+...++|.++
T Consensus 39 ~~~~~he~v~ 48 (387)
T 3gnf_B 39 YIRQDNERVL 48 (387)
T ss_dssp EECCTTEEEC
T ss_pred eEhhhccccc
Confidence 3444444443
No 5
>1v1h_A Fibritin, fiber protein; chimera; 1.9A {Human adenovirus type 2} SCOP: b.83.1.1 h.1.17.1 PDB: 1v1i_A
Probab=16.57 E-value=5.1e+02 Score=25.15 Aligned_cols=19 Identities=11% Similarity=0.298 Sum_probs=7.4
Q ss_pred CeEeccCCCeEeccCCcee
Q psy14307 830 PVLLDKKSPVLLDKKGPVI 848 (1235)
Q Consensus 830 pvvl~~k~~vvl~~k~p~v 848 (1235)
++.+.-|-++-.|+++.++
T Consensus 54 ~i~VKLG~GLsFDs~G~I~ 72 (103)
T 1v1h_A 54 AMITKLGAGLSFDNSGAIT 72 (103)
T ss_dssp CEEECBCTTCEECTTSCEE
T ss_pred cEEEeecCCeeEcCCCCEE
Confidence 3333333333333333333
No 6
>3izo_F Fiber; pentameric penton base, trimeri viral protein; 3.60A {Human adenovirus 5}
Probab=12.70 E-value=1.8e+03 Score=26.83 Aligned_cols=78 Identities=15% Similarity=0.291 Sum_probs=35.2
Q ss_pred ccccccccCCCCcccccCCccccc----ccCCcccccCCCceeccCCCcccccCCCcccccCCCccccccccceeccCCC
Q psy14307 698 TTTKTLLLDKKEPVLLDKKEPVLL----DKKEPVLLDKKEPVLLDKKEPVLLDEKEPVLLDKKEPVLLDKKERVLLDKKE 773 (1235)
Q Consensus 698 ~tpk~dlLdk~EaVV~~e~e~vvl----~esE~VV~~k~E~VvldE~e~Vv~dE~E~Vvlde~E~vV~de~E~Vv~de~E 773 (1235)
++=..+-|.-...|.+++.-.+.+ ....++-.. ...+-|.=+++|..+. .++-+.-..++... ...|-+.-+.
T Consensus 57 ~~nG~LsLk~G~GLtl~~~G~L~~~~~~~v~~PL~~t-~~~isL~v~~pL~v~~-~~L~L~~~~PL~vs-~n~LtL~~~~ 133 (581)
T 3izo_F 57 TSNGMLALKMGNGLSLDEAGNLTSQNVTTVSPPLKKT-KSNINLEISAPLTVTS-EALTVAAAAPLMVA-GNTLTMQSQA 133 (581)
T ss_pred ecCCcEEEEecCCeeEcCCCCEEEcccccccCCceec-ccceeeccCCCceecC-CceEecccCCcEEe-CCeEEEEeCC
Confidence 344556666667776644333332 222233322 2334444444444443 34445555555544 3344444444
Q ss_pred ccccc
Q psy14307 774 PVLLD 778 (1235)
Q Consensus 774 ~vv~d 778 (1235)
++.++
T Consensus 134 pL~V~ 138 (581)
T 3izo_F 134 PLTVH 138 (581)
T ss_pred CeEEe
Confidence 44443
No 7
>3vwc_A Serine protease inhibitor 1; sulphur SAD phasing, beta trefoil, serine proteas hydrolase inhibitor; 1.50A {Coprinopsis cinerea} PDB: 3n0k_A
Probab=10.56 E-value=1.1e+02 Score=31.38 Aligned_cols=20 Identities=10% Similarity=-0.021 Sum_probs=12.6
Q ss_pred ccCCceeeccccccceEEee
Q psy14307 1010 LSQNYYYHQNLSLKYYCRRN 1029 (1235)
Q Consensus 1010 ~st~~Y~~qN~~~~~yT~kn 1029 (1235)
+++|.||.+|..-++|--++
T Consensus 2 l~sG~Y~I~sk~~~~~lgR~ 21 (149)
T 3vwc_A 2 IKPGTYEVTSKVNGLHVGRP 21 (149)
T ss_dssp CCSEEEEEEETTTCCBEECC
T ss_pred cccceEEEEecCCCceeeec
Confidence 56777887776555555444
No 8
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=9.58 E-value=4.6e+02 Score=30.26 Aligned_cols=10 Identities=20% Similarity=0.315 Sum_probs=5.8
Q ss_pred CCceeecCCC
Q psy14307 923 KPEVFKVPPK 932 (1235)
Q Consensus 923 ~~~~~~~~~~ 932 (1235)
+..|++|+--
T Consensus 220 ~~DvLkv~HH 229 (547)
T 2bib_A 220 KVDLMKFNHH 229 (547)
T ss_dssp CCSEEECTTT
T ss_pred ceeEEEeccc
Confidence 4567776533
No 9
>1v1h_A Fibritin, fiber protein; chimera; 1.9A {Human adenovirus type 2} SCOP: b.83.1.1 h.1.17.1 PDB: 1v1i_A
Probab=7.20 E-value=1.5e+03 Score=21.94 Aligned_cols=24 Identities=13% Similarity=0.314 Sum_probs=10.2
Q ss_pred ccCCceeecCCCceEecCCCceEe
Q psy14307 842 DKKGPVILDKKEPVLLDKKEPVLL 865 (1235)
Q Consensus 842 ~~k~p~v~e~~~~vvl~~k~pvv~ 865 (1235)
+..+.+....|--+-.|+.+.++.
T Consensus 50 ~~n~~i~VKLG~GLsFDs~G~I~a 73 (103)
T 1v1h_A 50 NENGAMITKLGAGLSFDNSGAITI 73 (103)
T ss_dssp CTTSCEEECBCTTCEECTTSCEES
T ss_pred cCCccEEEeecCCeeEcCCCCEEe
Confidence 333344444443344444444443
No 10
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=6.19 E-value=1.1e+02 Score=41.28 Aligned_cols=165 Identities=12% Similarity=0.045 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy14307 513 LEPKLLLPPKSEPELLLPPKPEPELLLPPKPKPELLLPPKPEPEKLLLPPKPKPKLLLPPKPESELLLPPKPEPELIIPP 592 (1235)
Q Consensus 513 ~e~~~~~PP~p~~p~~~pP~Pepp~p~~P~P~p~~p~pP~Pe~~~v~~pP~p~p~~~~pPaPe~p~~~pP~Pep~~p~~P 592 (1235)
+..+...+.++.-...+|........-+|....-++.+|+--+.+.+..|.++...+.+|..-+..++. +|..+...++
T Consensus 1587 ~tsP~ysptspaysptsps~s~tsp~yspts~~ysptSPsysptSPs~sptsPsysptsPs~sptSPs~-sptspsysp~ 1665 (1752)
T 3h0g_A 1587 PTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPT 1665 (1752)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCC
Q psy14307 593 KPEPEILIPPKPEPELLLPPKPEPEILLPPKPEPELLLPPKPEPEILLPPKPEPELLLPPKPESELLLPLKPEPEILLPP 672 (1235)
Q Consensus 593 aPEpe~~~~P~Pepe~p~~PaPe~~~~~~P~p~p~~~~~P~Pe~~~~~aP~P~~~~~~pP~Pe~~~~aaP~pepe~~~~P 672 (1235)
.|.....++.-...++.-+|....-++.+|...+..+..+.+.+........-.+..+.-.+..+..++..|-..+.+++
T Consensus 1666 SPsySp~Sps~Sp~sps~sp~sP~~sp~sPsySp~sp~~sp~sp~~sP~sp~~sp~sP~ysp~sps~sp~sp~~Sp~sp~ 1745 (1752)
T 3h0g_A 1666 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1745 (1752)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_pred CCCCCC
Q psy14307 673 KPEPEL 678 (1235)
Q Consensus 673 ~PEpe~ 678 (1235)
.....+
T Consensus 1746 ~sp~~p 1751 (1752)
T 3h0g_A 1746 YSPTSP 1751 (1752)
T ss_dssp ------
T ss_pred CCCCCC
Done!