Query psy14319
Match_columns 486
No_of_seqs 344 out of 2919
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 16:49:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14319.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14319hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eei_A Adenylosuccinate lyase; 100.0 1.3E-37 4.3E-42 328.4 17.0 192 229-484 191-384 (438)
2 2j91_A Adenylosuccinate lyase; 100.0 5.4E-37 1.8E-41 328.7 16.9 214 205-482 219-432 (503)
3 1c3c_A Protein (adenylosuccina 100.0 1.9E-36 6.5E-41 319.2 19.8 205 205-485 178-384 (429)
4 1yis_A Adenylosuccinate lyase; 100.0 2.7E-37 9.2E-42 329.7 13.1 215 205-483 193-407 (478)
5 1tj7_A Argininosuccinate lyase 100.0 3.8E-36 1.3E-40 318.9 21.8 165 2-186 171-342 (457)
6 2pfm_A Adenylosuccinate lyase; 100.0 2.8E-36 9.5E-41 319.0 20.7 205 205-485 190-396 (444)
7 1re5_A 3-carboxy-CIS,CIS-mucon 100.0 5.3E-36 1.8E-40 317.6 20.7 205 206-485 192-398 (450)
8 2e9f_A Argininosuccinate lyase 100.0 4.6E-36 1.6E-40 318.7 20.1 178 2-199 174-358 (462)
9 3c8t_A Fumarate lyase; structu 100.0 9.2E-36 3.1E-40 315.7 18.6 206 205-485 189-396 (451)
10 1q5n_A 3-carboxy-CIS,CIS-mucon 100.0 1E-35 3.5E-40 315.7 18.6 204 206-484 196-401 (454)
11 1k7w_A Delta 2 crystallin; eye 100.0 1.1E-35 3.8E-40 316.2 17.2 181 2-202 177-364 (468)
12 2pfm_A Adenylosuccinate lyase; 100.0 2.9E-35 1E-39 311.2 17.7 214 2-246 167-383 (444)
13 1c3c_A Protein (adenylosuccina 100.0 2.1E-35 7.1E-40 311.3 16.4 214 2-246 155-371 (429)
14 1dof_A Adenylosuccinate lyase; 100.0 1E-35 3.4E-40 311.2 13.5 188 229-485 195-385 (403)
15 1q5n_A 3-carboxy-CIS,CIS-mucon 100.0 3.5E-35 1.2E-39 311.7 16.6 216 2-246 172-389 (454)
16 4eei_A Adenylosuccinate lyase; 100.0 2.6E-35 9.1E-40 310.7 15.1 215 2-247 156-373 (438)
17 1re5_A 3-carboxy-CIS,CIS-mucon 100.0 6.1E-35 2.1E-39 309.4 17.3 216 2-246 168-385 (450)
18 3c8t_A Fumarate lyase; structu 100.0 5.6E-35 1.9E-39 309.7 16.5 216 2-246 166-383 (451)
19 1yis_A Adenylosuccinate lyase; 100.0 6.1E-34 2.1E-38 303.8 17.4 193 2-203 170-368 (478)
20 1dof_A Adenylosuccinate lyase; 100.0 4.6E-34 1.6E-38 298.6 13.1 214 2-248 158-374 (403)
21 2j91_A Adenylosuccinate lyase; 100.0 2.1E-33 7.2E-38 300.9 18.0 192 2-202 196-393 (503)
22 2fel_A 3-carboxy-CIS,CIS-mucon 100.0 3.9E-32 1.3E-36 279.9 14.6 184 2-202 170-354 (359)
23 1fur_A Fumarase C, FUMC; hydro 100.0 2.7E-31 9.2E-36 282.2 17.2 191 2-203 203-401 (467)
24 1vdk_A Fumarase C, fumarate hy 100.0 4.6E-31 1.6E-35 280.5 17.6 191 2-203 203-401 (466)
25 1jsw_A L-aspartase, L-aspartat 100.0 1.1E-30 3.6E-35 278.5 19.0 191 2-203 206-404 (478)
26 3gtd_A Fumarase C, fumarate hy 100.0 5.1E-31 1.7E-35 279.4 16.1 191 2-202 224-421 (482)
27 1yfm_A Fumarase, YFUM; lyase, 100.0 2.2E-30 7.4E-35 276.0 17.6 191 2-203 228-426 (488)
28 3e04_A Fumarase, fumarate hydr 100.0 1.3E-30 4.3E-35 276.6 14.4 191 2-202 230-427 (490)
29 3r6q_A Aspartase; aspartate am 100.0 3.1E-30 1.1E-34 273.7 17.0 191 2-203 203-401 (468)
30 2qga_B Adenylosuccinate lyase; 100.0 1.8E-30 6.2E-35 276.0 15.0 186 2-203 185-377 (465)
31 2ptr_A Adenylosuccinate lyase; 100.0 2.3E-30 7.9E-35 275.0 14.8 190 2-203 186-377 (462)
32 4adm_A Fumarase C, fumarate hy 100.0 1.2E-29 4.1E-34 270.3 16.5 191 2-203 224-423 (495)
33 2ptr_A Adenylosuccinate lyase; 100.0 1.9E-29 6.5E-34 268.0 18.0 206 205-482 206-412 (462)
34 3ocf_A Fumarate lyase:delta cr 100.0 1.5E-29 5.2E-34 268.5 17.0 191 2-203 223-421 (478)
35 2qga_B Adenylosuccinate lyase; 100.0 1.2E-29 4.1E-34 269.7 16.1 183 231-480 227-410 (465)
36 3r6q_A Aspartase; aspartate am 100.0 4.2E-29 1.4E-33 265.0 19.8 185 224-484 238-430 (468)
37 3gtd_A Fumarase C, fumarate hy 100.0 3.2E-29 1.1E-33 265.6 18.1 185 225-480 260-451 (482)
38 3bhg_A Adenylosuccinate lyase; 100.0 1.7E-29 6E-34 268.1 15.4 185 2-203 189-380 (459)
39 4hgv_A Fumarase C, fumarate hy 100.0 3.9E-29 1.3E-33 266.7 17.1 191 2-202 235-432 (495)
40 3bhg_A Adenylosuccinate lyase; 100.0 9.2E-29 3.1E-33 262.6 18.1 185 229-480 229-413 (459)
41 3e04_A Fumarase, fumarate hydr 100.0 6.1E-29 2.1E-33 263.7 16.6 183 225-478 266-455 (490)
42 1jsw_A L-aspartase, L-aspartat 100.0 2.1E-28 7.1E-33 260.8 20.1 179 229-483 246-432 (478)
43 4adm_A Fumarase C, fumarate hy 100.0 1E-28 3.6E-33 263.1 17.3 185 225-481 260-453 (495)
44 1fur_A Fumarase C, FUMC; hydro 100.0 2.1E-28 7.2E-33 260.0 19.1 179 228-478 242-428 (467)
45 4hgv_A Fumarase C, fumarate hy 100.0 1.4E-28 4.7E-33 262.5 17.6 184 227-481 273-463 (495)
46 3ocf_A Fumarate lyase:delta cr 100.0 1.8E-28 6E-33 260.3 17.4 185 223-478 257-448 (478)
47 1vdk_A Fumarase C, fumarate hy 100.0 1.5E-28 5E-33 261.3 16.2 177 228-476 242-426 (466)
48 1yfm_A Fumarase, YFUM; lyase, 100.0 5E-28 1.7E-32 257.8 18.1 179 228-478 267-453 (488)
49 2fel_A 3-carboxy-CIS,CIS-mucon 99.9 6.1E-27 2.1E-31 241.2 10.9 162 205-444 193-355 (359)
50 1tj7_A Argininosuccinate lyase 99.9 2.9E-24 9.9E-29 227.8 10.1 188 232-485 208-398 (457)
51 2e9f_A Argininosuccinate lyase 99.9 5.5E-24 1.9E-28 226.0 9.1 190 230-485 209-401 (462)
52 1k7w_A Delta 2 crystallin; eye 99.9 5.7E-24 1.9E-28 226.2 7.0 189 230-485 212-403 (468)
No 1
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp}
Probab=100.00 E-value=1.3e-37 Score=328.43 Aligned_cols=192 Identities=21% Similarity=0.318 Sum_probs=155.7
Q ss_pred HHHHHHHHHHHcCCCCCccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhhccccccCCCCcCcCCCCCC
Q psy14319 229 VKALDRLVTKKAGFTSSHIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH--MKEIEEPFESTQIGSSAMAYKR 306 (486)
Q Consensus 229 ~~~i~~~lA~~LGf~~a~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss--~~el~~~~~~~~~GSSiMPqKr 306 (486)
.+.+++++++.|||... +..+++++||+++|++++++.++++|+|||+||++|++ |||+.+||+++++|||||||||
T Consensus 191 ~~~~~~~~a~~LG~~~~-~~~~~v~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~~~e~gel~~~f~~~q~GSSiMP~K~ 269 (438)
T 4eei_A 191 TTEDEKKAADILGLPVE-EVSTQVIPRDRIAKLISIHGLIASAIERLAVEIRHLHRSDVFEVYEGFSKGQKGSSTMPHKK 269 (438)
T ss_dssp CHHHHHHHHHHHTCCBC-SSCSSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCSEECCC------------CC
T ss_pred cHHHHHHHHHHcCCCCC-CccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeccccccCCCCCCCCCCCC
Confidence 36788999999999854 45688999999999999999999999999999999997 9999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccCCcchhhhhhccCCCCccccccC
Q psy14319 307 NPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHGKENDLVDRIRADPYFAPILNQM 386 (486)
Q Consensus 307 NP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~ 386 (486)
||+.+|+++++|++++|++.+.+. ....|+|||+.+|.
T Consensus 270 NP~~~E~i~~~a~~v~g~~~~~~~-~~~~~~erdl~~~~----------------------------------------- 307 (438)
T 4eei_A 270 NPISTENLTGMARMLRSHVSIALE-NCVLWHERDISHSS----------------------------------------- 307 (438)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH-TTCCCTTCCSHHHH-----------------------------------------
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHh-ccchhcCccchhhH-----------------------------------------
Confidence 999999999999999999865433 34556666664321
Q ss_pred CCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHHHHHhccCChhHHHHHHHHHHHcCC
Q psy14319 387 PTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGG 466 (486)
Q Consensus 387 ~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~~~~~a~~~~~~L~~~g~ 466 (486)
.+|..+++++.++..++.++..++++|+||+++|+++++.++++++||+++++||++|+
T Consensus 308 ---------------------~er~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~~~a~~~a~~Lv~~g~ 366 (438)
T 4eei_A 308 ---------------------AERFYLPDNFGIMVYALRRMKNTIDNLVVQRDIIEDRVRSTSAYLSSFYLHFLVANTPF 366 (438)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHCCTTHHHHHHHHHHHHSSC
T ss_pred ---------------------HHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccCHHHHHHHHHHHHHcCC
Confidence 13568999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHhhh
Q psy14319 467 DRQVCHEKIRVLSHQAGA 484 (486)
Q Consensus 467 ~fr~Ah~~v~~~~~~a~~ 484 (486)
|||+||++|++++++|.+
T Consensus 367 ~~~~Ah~~v~~~~~~a~~ 384 (438)
T 4eei_A 367 MREDCYKIVQQVAFDLKQ 384 (438)
T ss_dssp CHHHHHHHHHHC------
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 999999999999998864
No 2
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A*
Probab=100.00 E-value=5.4e-37 Score=328.70 Aligned_cols=214 Identities=66% Similarity=0.940 Sum_probs=174.9
Q ss_pred cCCCCCCcccccccccCCCCCCCcHHHHHHHHHHHcCCCCCccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14319 205 IIPDNRLSSHHTTKRSGRPGDGDKVKALDRLVTKKAGFTSSHIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH 284 (486)
Q Consensus 205 ~~~~~~g~~~~~~~~~~~~~~g~~~~~i~~~lA~~LGf~~a~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss 284 (486)
+++|..||.. .+.+.|.+++...+.+.+++++.|||..+.+.++++++||+++|++++++.++++|+|||+||++|++
T Consensus 219 g~gG~~GT~a--~~~~~f~~D~~~~~~v~~~~a~~LGl~~~~~~s~~~~~rd~~~e~~~~la~la~~L~kia~Dirll~s 296 (503)
T 2j91_A 219 GVKGTTGTQA--SFLQLFEGDDHKVEQLDKMVTEKAGFKRAFIITGQTYTRKVDIEVLSVLASLGASVHKICTDIRLLAN 296 (503)
T ss_dssp CSCCTTSSCH--HHHHHTTTCHHHHHHHHHHHHHHTTCSCBCSCCSSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccchh--hhccccCCchHHHHHHHHHHHHHhCCCCCCCcccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4567777752 12222444444567888999999999966566779999999999999999999999999999999999
Q ss_pred hhhccccccCCCCcCcCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccC
Q psy14319 285 MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHG 364 (486)
Q Consensus 285 ~~el~~~~~~~~~GSSiMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g 364 (486)
++||.+||..+++|||||||||||+.+|.++++|++++|++++++..+...|+|||++.|.+
T Consensus 297 ~~ei~ep~~~~q~GSSiMP~K~NPv~~E~i~~~a~~v~g~~~~~~~~~~~~~~erd~~~s~~------------------ 358 (503)
T 2j91_A 297 LKEMEEPFEKQQIGSSAMPYKRNPMRSERCCSLARHLMTLVMDPLQTASVQWFERTLDDSAN------------------ 358 (503)
T ss_dssp HTSEECCC-----------CCCCCHHHHHHHHHHHHHHHTTHHHHHHHHTCCTTCCGGGHHH------------------
T ss_pred cceeeccccCCCCCCCCCccccCcHHHHHHHHHHHHHHHHHHHHHHHHccCcccccccchHH------------------
Confidence 99999999889999999999999999999999999999999988888888899999876532
Q ss_pred CcchhhhhhccCCCCccccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHHHH
Q psy14319 365 KENDLVDRIRADPYFAPILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRH 444 (486)
Q Consensus 365 ~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~ 444 (486)
.|..+++++.+++.++.++..|+++|+||+++|+++
T Consensus 359 --------------------------------------------~~~~l~~~~~~~~~~l~~~~~~l~gL~vn~erm~~~ 394 (503)
T 2j91_A 359 --------------------------------------------RRICLAEAFLTADTILNTLQNISEGLVVYPKVIERR 394 (503)
T ss_dssp --------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHSCEECHHHHHHH
T ss_pred --------------------------------------------HHhhHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHH
Confidence 234789999999999999999999999999999999
Q ss_pred HhccCChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHh
Q psy14319 445 IDQELPFMATENIIMAMVKAGGDRQVCHEKIRVLSHQA 482 (486)
Q Consensus 445 l~~~~~~~~a~~~~~~L~~~g~~fr~Ah~~v~~~~~~a 482 (486)
++.++++++|+.+++.|+++|++|++||++|++.++++
T Consensus 395 l~~s~~~~ate~v~~~lv~~G~~~~~Ah~~v~~~a~~~ 432 (503)
T 2j91_A 395 IRQELPFMATENIIMAMVKAGGSRQDCHEKIRVLSQQA 432 (503)
T ss_dssp HHHHHHHHSHHHHHHHHC--CCCHHHHHHHHHHHHHHH
T ss_pred HHhccChHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHh
Confidence 99998988889999999999999999999997777655
No 3
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A
Probab=100.00 E-value=1.9e-36 Score=319.20 Aligned_cols=205 Identities=21% Similarity=0.337 Sum_probs=175.0
Q ss_pred cCCCCCCcccccccccCCCCCCCcHHHHHHHHHHHcCCCCCccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14319 205 IIPDNRLSSHHTTKRSGRPGDGDKVKALDRLVTKKAGFTSSHIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH 284 (486)
Q Consensus 205 ~~~~~~g~~~~~~~~~~~~~~g~~~~~i~~~lA~~LGf~~a~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss 284 (486)
.++|..||..+ ..+.+++++++.|||+.+.. .+++.+||+++|++++++.++++|+|||+||++|++
T Consensus 178 ~lGgAvGt~~~------------~~~~~~~~~a~~LGl~~~~~-~d~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~~ 244 (429)
T 1c3c_A 178 KISGAVGNYAN------------VPPEVEEKALSYLGLKPEPV-STQVVPRDRHAFYLSTLAIVAAGIERIAVEIRHLQR 244 (429)
T ss_dssp CCCCTTSSCSS------------SCHHHHHHHHHHTTCEECSS-CSSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCchhhcCCcc------------CCHHHHHHHHHHcCCCCCCC-CcCccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 36667777532 12579999999999986532 246679999999999999999999999999999999
Q ss_pred --hhhccccccCCCCcCcCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhc
Q psy14319 285 --MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQ 362 (486)
Q Consensus 285 --~~el~~~~~~~~~GSSiMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 362 (486)
|||+.+|+.++++|||||||||||+.+|.++++|++++|++.+++.. ..+|+|||+.+|.
T Consensus 245 ~e~~El~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~-~~~~~erd~~~~~----------------- 306 (429)
T 1c3c_A 245 TEVLEVEEPFRKGQRGSSAMPHKKNPITCERLTGLSRMMRAYVDPSLEN-IALWHERDISHSS----------------- 306 (429)
T ss_dssp TTTCSEECCCCC-----CCCTTCCCCHHHHHHHHHHHHHHHTHHHHHHT-TCCSTTCCSHHHH-----------------
T ss_pred cccchhccccccCCCcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhc-CCccccccccccH-----------------
Confidence 99999999889999999999999999999999999999999988765 4577777764321
Q ss_pred cCCcchhhhhhccCCCCccccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHH
Q psy14319 363 HGKENDLVDRIRADPYFAPILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQ 442 (486)
Q Consensus 363 ~g~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~ 442 (486)
.+|..+++++.++..++.++..++++|+||+++|+
T Consensus 307 ---------------------------------------------~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~ 341 (429)
T 1c3c_A 307 ---------------------------------------------VERYVFPDATQTLYYMIVTATNVVRNMKVNEERMK 341 (429)
T ss_dssp ---------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHH
T ss_pred ---------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHCcCeeCHHHHH
Confidence 13568899999999999999999999999999999
Q ss_pred HHHhccCChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHhhhc
Q psy14319 443 RHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRVLSHQAGAQ 485 (486)
Q Consensus 443 ~~l~~~~~~~~a~~~~~~L~~~g~~fr~Ah~~v~~~~~~a~~~ 485 (486)
++++.+.++++||+++++|+++|+|||+||++|+++++.|.++
T Consensus 342 ~~l~~s~~~~~a~~la~~L~~~gig~~~A~~iv~~~~~~a~~~ 384 (429)
T 1c3c_A 342 KNIDLTKGLVFSQRVLLKLIEKGLTRKEAYDIVQRNALKTWNS 384 (429)
T ss_dssp HHHTTTTTGGGHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHhccChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999998653
No 4
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans}
Probab=100.00 E-value=2.7e-37 Score=329.68 Aligned_cols=215 Identities=43% Similarity=0.609 Sum_probs=154.9
Q ss_pred cCCCCCCcccccccccCCCCCCCcHHHHHHHHHHHcCCCCCccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14319 205 IIPDNRLSSHHTTKRSGRPGDGDKVKALDRLVTKKAGFTSSHIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH 284 (486)
Q Consensus 205 ~~~~~~g~~~~~~~~~~~~~~g~~~~~i~~~lA~~LGf~~a~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss 284 (486)
+++|..||..+ +.+.|.++....+.+.+++++.|||..+.+.++++++||+++|++++++.++++|+|||+||++|++
T Consensus 193 g~gg~~GT~a~--~~~~f~~d~~~~~~v~~~~a~~LG~~~~~~~s~~~~~rd~~~e~~~~l~~~a~~L~kia~Di~ll~s 270 (478)
T 1yis_A 193 GIKGATGTQDS--FLTLFAGDESKVEALDELVTKKANFSNRFLITGQTYSRQQDSQLVFSLSLLGAAAKKVCTDIRVLQA 270 (478)
T ss_dssp CSCTTTSSCHH--HHHHTTTCHHHHHHHHHHHHHHTTCSCBCSSCSSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhccchh--hhcccCcchhhHHHHHHHHHHHhCcCCCCCccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45667777521 2222344444457788999999999966566779999999999999999999999999999999999
Q ss_pred hhhccccccCCCCcCcCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccC
Q psy14319 285 MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHG 364 (486)
Q Consensus 285 ~~el~~~~~~~~~GSSiMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g 364 (486)
++||.+||..+++|||||||||||+.+|.++++|++++|++++++..+...|+|||++.|.+
T Consensus 271 ~~el~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~er~~~~~~~------------------ 332 (478)
T 1yis_A 271 FGELLEPFEKDQIGSSAMPYKKNPMKSERCCALSRKLINAPQEALTILADQGLERTLDDSAG------------------ 332 (478)
T ss_dssp TTSEECC-------------CCCCHHHHHHHHHHHHHHTSHHHHHHHHHTCCTTCCGGGHHH------------------
T ss_pred hhheeccccCCCCccccCCcccCCHHHHHHHHHHHHHHHhHHHHHHHhccCCcccCcchHHH------------------
Confidence 99999999888999999999999999999999999999999988888888899998875432
Q ss_pred CcchhhhhhccCCCCccccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHHHH
Q psy14319 365 KENDLVDRIRADPYFAPILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRH 444 (486)
Q Consensus 365 ~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~ 444 (486)
.|..+++++.+++.++.++..|+++|+||+++|+++
T Consensus 333 --------------------------------------------~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~ 368 (478)
T 1yis_A 333 --------------------------------------------RRMLIPDVLLTAEALLTTLQNIFEGLSVQTDNVKKI 368 (478)
T ss_dssp --------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHH
T ss_pred --------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHH
Confidence 234789999999999999999999999999999999
Q ss_pred HhccCChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHhh
Q psy14319 445 IDQELPFMATENIIMAMVKAGGDRQVCHEKIRVLSHQAG 483 (486)
Q Consensus 445 l~~~~~~~~a~~~~~~L~~~g~~fr~Ah~~v~~~~~~a~ 483 (486)
++.++++++++.+++.|+++|++||+||++|++++.++.
T Consensus 369 l~~~~~~~~te~v~~~l~~~G~~~~~Ah~~v~~~a~~~~ 407 (478)
T 1yis_A 369 VEDEIAFLGLEKAMMMLTEEGVDRQQAHAVIRKTALEAK 407 (478)
T ss_dssp HHHHHHHHHHHHHHHHC----------------------
T ss_pred HHhCCChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 999888888888999999999999999999999888764
No 5
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1
Probab=100.00 E-value=3.8e-36 Score=318.94 Aligned_cols=165 Identities=14% Similarity=0.145 Sum_probs=135.4
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCCCCcc-cccccccHHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSSHIIT-GQTYSRKVDV 80 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~~~~~-~av~~RD~~~ 80 (486)
+|+++|.||.+|++++.++++.. ++|| ++++|+.++ +|+ ++++++|||..+..++ +++++||+++
T Consensus 171 ~~~~~l~r~~~rL~~~~~~~~~~-~lGg-aA~aGt~~~--~~~----------~~la~~LGl~~~~~n~~~~~~~rD~~~ 236 (457)
T 1tj7_A 171 AYVEMLARDESRLQDALKRLDVS-PLGC-GALAGTAYE--IDR----------EQLAGWLGFASATRNSLDSVSDRDHVL 236 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCB-CTTC-TTTTCCSSC--CCH----------HHHHHHHTCSSBCSCHHHHHHCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhc-Cccc-cccCCCCCC--CCH----------HHHHHHcCCCCCCCChHHHHHccHHHH
Confidence 79999999999999999999853 4434 588999986 774 6899999999886555 9999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--cc--ccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHH--Hhhc
Q psy14319 81 IVTGVLSSLGASIHKLATDLRLLAH--MK--EIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSL--ATAS 154 (486)
Q Consensus 81 e~~~~la~la~~LsRlA~DL~l~ss--~~--el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l--~~~~ 154 (486)
|++++++.++++|+|||+||++|++ |+ |++++++ +|||||||||||+.+|+++++|+++.|+..+++ ..++
T Consensus 237 e~~~~l~~~a~~L~kia~Di~ll~s~e~g~iel~e~~~---~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~ 313 (457)
T 1tj7_A 237 ELLSAAAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVT---SGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGL 313 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSTTTCCEECCGGGC---BCCTTCTTCCBCHHHHHHHHTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCC---CCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999997 88 6666653 799999999999999999999999999999754 4567
Q ss_pred cccccCCCchhhHhhhchHHHHHHHHHHHHHH
Q psy14319 155 TQWMERTLDDSANRRLTLSESFLTTDCLLITL 186 (486)
Q Consensus 155 ~~~~erDl~~~~~~~~~l~~a~~~~~~~l~~~ 186 (486)
|.+||||+++. |..+++++.++..++..+
T Consensus 314 p~~~~RDl~~~---~~~l~~s~~~~~~~l~~~ 342 (457)
T 1tj7_A 314 PLAYNKDMQED---KEGLFDALDTWLDCLHMA 342 (457)
T ss_dssp CSSCCGGGGGH---HHHHHHHHHHHHHHHHHH
T ss_pred cHHhhcchhhH---HhHHHHHHHHHHHHHHHH
Confidence 88999998753 344444444443333333
No 6
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A*
Probab=100.00 E-value=2.8e-36 Score=319.03 Aligned_cols=205 Identities=23% Similarity=0.381 Sum_probs=179.8
Q ss_pred cCCCCCCcccccccccCCCCCCCcHHHHHHHHHHHcCCCCCccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14319 205 IIPDNRLSSHHTTKRSGRPGDGDKVKALDRLVTKKAGFTSSHIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH 284 (486)
Q Consensus 205 ~~~~~~g~~~~~~~~~~~~~~g~~~~~i~~~lA~~LGf~~a~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss 284 (486)
.++|..||..+ ..+.+++++++.|||+.+.. .+++.+||+++|++++++.++++|+|||+||++|++
T Consensus 190 ~lGgAvGt~~~------------~~~~~~~~~a~~LGl~~~~~-~d~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~~ 256 (444)
T 2pfm_A 190 KLSGAVGTYAN------------IDPFVEKYVCENLGLEAAPI-STQTLQRDRHAHYMSTLALIATSIEKMAVEIRGLQK 256 (444)
T ss_dssp CCCCTTSSCTT------------SCHHHHHHHHHHTTCEECSS-CSSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCchhhccCCc------------CCHHHHHHHHHHhCCCCCCC-CcCccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 36667777531 12578999999999986532 246679999999999999999999999999999999
Q ss_pred --hhhccccccCCCCcCcCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhc
Q psy14319 285 --MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQ 362 (486)
Q Consensus 285 --~~el~~~~~~~~~GSSiMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 362 (486)
||||.+|+.++++|||||||||||+.+|.++++|++++|+..+++.. ..+|+|||+.+|.
T Consensus 257 ~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~-~~~~~erd~~~~~----------------- 318 (444)
T 2pfm_A 257 SETREVEEAFAKGQKGSSAMPHKRNPIGSENMTGLARVIRGYMMTAYEN-VPLWHERDISHSS----------------- 318 (444)
T ss_dssp TTTCSEECCCCTTCCSCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHT-SCCCTTCCSHHHH-----------------
T ss_pred ccccccccccccCCCcCccCCcccCCHHHHHHHHHHHHHHHHHHHHHHh-CcccccccccchH-----------------
Confidence 99999999889999999999999999999999999999999988765 4577777764321
Q ss_pred cCCcchhhhhhccCCCCccccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHH
Q psy14319 363 HGKENDLVDRIRADPYFAPILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQ 442 (486)
Q Consensus 363 ~g~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~ 442 (486)
.+|..+++++.++..++.++..|+++|+||++||+
T Consensus 319 ---------------------------------------------~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~ 353 (444)
T 2pfm_A 319 ---------------------------------------------AERVILPDATIALNYMLNRFGNIVKNLTVYPENMK 353 (444)
T ss_dssp ---------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHTCEECHHHHH
T ss_pred ---------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHH
Confidence 13568999999999999999999999999999999
Q ss_pred HHHhccCChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHhhhc
Q psy14319 443 RHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRVLSHQAGAQ 485 (486)
Q Consensus 443 ~~l~~~~~~~~a~~~~~~L~~~g~~fr~Ah~~v~~~~~~a~~~ 485 (486)
++++.+.++++||+++++|+++|+|||+||++|+++++.|.++
T Consensus 354 ~~l~~s~~~~~ae~la~~L~~~gig~~~A~~iv~~~~~~a~~~ 396 (444)
T 2pfm_A 354 RNMTRTYGLIYSQRVMLTLIDKGMVREEAYDIVQPKAMEAWET 396 (444)
T ss_dssp HHHTTTTTGGGHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCcCchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998653
No 7
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1
Probab=100.00 E-value=5.3e-36 Score=317.59 Aligned_cols=205 Identities=22% Similarity=0.214 Sum_probs=171.2
Q ss_pred CCCCCCcccccccccCCCCCCCcHHHHHHHHHHHcCCCCCccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Q psy14319 206 IPDNRLSSHHTTKRSGRPGDGDKVKALDRLVTKKAGFTSSHIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH- 284 (486)
Q Consensus 206 ~~~~~g~~~~~~~~~~~~~~g~~~~~i~~~lA~~LGf~~a~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss- 284 (486)
++|+.||.... +..+..+.+++++.|||..+. ..++++||+++|++++++.++++|+|||+||++|++
T Consensus 192 lGGAvGt~~~~---------~~~~~~~~~~la~~LG~~~~~--~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~~~ 260 (450)
T 1re5_A 192 FGGASGSLAAL---------GSKAMPVAEALAEQLKLTLPE--QPWHTQRDRLVEFASVLGLVAGSLGKFGRDISLLMQT 260 (450)
T ss_dssp CCCTTSSCGGG---------GGGHHHHHHHHHHHHTCBCCS--SCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred CcchhcCCccc---------CcchHHHHHHHHHHhCcCCCC--cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 56677876421 122558899999999998753 347899999999999999999999999999999999
Q ss_pred -hhhccccccCCCCcCcCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhcc
Q psy14319 285 -MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQH 363 (486)
Q Consensus 285 -~~el~~~~~~~~~GSSiMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (486)
||||.+|+.++++|||||||||||+.+|.++++|++++|++.+++.. ...|+|||+.+|..
T Consensus 261 e~~El~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~-~~~~~erd~~~~~~----------------- 322 (450)
T 1re5_A 261 EAGEVFEPSAPGKGGSSTMPHKRNPVGAAVLIGAATRVPGLLSTLFAA-MPQEHERSLGLWHA----------------- 322 (450)
T ss_dssp TTCCEECCCCC----------CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCCCTTBCSSTTTT-----------------
T ss_pred CcceeecccccCCCccccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHh-ChhhccccccchHH-----------------
Confidence 99999999888999999999999999999999999999999998865 35678887654321
Q ss_pred CCcchhhhhhccCCCCccccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHHH
Q psy14319 364 GKENDLVDRIRADPYFAPILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQR 443 (486)
Q Consensus 364 g~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~ 443 (486)
+|..+++++.++..++.++..++++|+||+++|++
T Consensus 323 ---------------------------------------------~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~ 357 (450)
T 1re5_A 323 ---------------------------------------------EWETLPDICCLVSGALRQAQVIAEGMEVDAARMRR 357 (450)
T ss_dssp ---------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHH
T ss_pred ---------------------------------------------HHHHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHH
Confidence 35689999999999999999999999999999999
Q ss_pred HHhccCChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHhhhc
Q psy14319 444 HIDQELPFMATENIIMAMVKAGGDRQVCHEKIRVLSHQAGAQ 485 (486)
Q Consensus 444 ~l~~~~~~~~a~~~~~~L~~~g~~fr~Ah~~v~~~~~~a~~~ 485 (486)
+++.+.++++||+++++|++ |+|||+||++|++++++|.++
T Consensus 358 ~l~~s~~~~~Ae~l~~~L~~-gig~~~A~~~v~~~~~~a~~~ 398 (450)
T 1re5_A 358 NLDLTQGLVLAEAVSIVLAQ-RLGRDRAHHLLEQCCQRAVAE 398 (450)
T ss_dssp HHTTSTTGGGHHHHHHHHHH-HSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCcChhHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999 899999999999999998654
No 8
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=4.6e-36 Score=318.74 Aligned_cols=178 Identities=19% Similarity=0.252 Sum_probs=141.8
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCCCCcc-cccccccHHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSSHIIT-GQTYSRKVDV 80 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~~~~~-~av~~RD~~~ 80 (486)
+|+++|.||.+|++++.++++. .++|| +|++|+.++ +|+ ++++++|||..+..++ +++++||+++
T Consensus 174 ~~~~~l~r~~~rL~~~~~~~~~-~~lGg-aA~aGt~~~--~~~----------~~~a~~LG~~~~~~n~~~~~~~rD~~~ 239 (462)
T 2e9f_A 174 AYYEMLKRDAGRLEDAKERLNE-SPLGA-AALAGTGFP--IDR----------HFTARELGFKAPMRNSLDAVASRDFAL 239 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCE-ECTTC-CSSSCCSSC--CCH----------HHHHHHTTCSEECSCHHHHHHCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-cCccc-cccccCCCC--CCH----------HHHHHHhCCCCCCCCcHHHHHccHHHH
Confidence 7999999999999999999985 34434 588999985 774 6899999999776555 9999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--cc--ccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHH--hhc
Q psy14319 81 IVTGVLSSLGASIHKLATDLRLLAH--MK--EIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLA--TAS 154 (486)
Q Consensus 81 e~~~~la~la~~LsRlA~DL~l~ss--~~--el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~--~~~ 154 (486)
|++++++.++++|+|||+||++|++ |+ +++++++ +|||||||||||+.+|+++++|+++.|+..+++. .++
T Consensus 240 e~~~~l~~~a~~L~kia~Dl~ll~s~e~g~iel~e~~~---~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~ 316 (462)
T 2e9f_A 240 EVLSALNIGMLHLSRMAEELILYSTEEFGFVEVPDAFA---TGSSIMPQKKNPDILELIRAKAGRVLGAFVGLSAVVKGL 316 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSTTTCCEECCGGGC---EECSSSSSCEECHHHHHHHHTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEecCCCC---CCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999996 88 6666653 6999999999999999999999999999987553 468
Q ss_pred cccccCCCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHh
Q psy14319 155 TQWMERTLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKE 199 (486)
Q Consensus 155 ~~~~erDl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~er 199 (486)
|.+||||++++ |..+++++.++..++..+..++++|+||+++
T Consensus 317 p~~~~rDl~~~---~~~l~~s~~~~~~~l~~~~~~l~gl~vn~e~ 358 (462)
T 2e9f_A 317 PLAYNKDLQED---KEPLLDALATYRDSLRLLAALLPGLKWRRER 358 (462)
T ss_dssp CSSBCGGGGGG---HHHHHHHHHHHHHHHHHHHHHGGGCEECHHH
T ss_pred chHhhhchhhh---HhHHHHHHHHHHHHHHHHHHHhCcCEECHHH
Confidence 89999999885 3455555544444433333333333333333
No 9
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP}
Probab=100.00 E-value=9.2e-36 Score=315.75 Aligned_cols=206 Identities=19% Similarity=0.267 Sum_probs=165.5
Q ss_pred cCCCCCCcccccccccCCCCCCCcHHHHHHHHHHHcCCCCCccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14319 205 IIPDNRLSSHHTTKRSGRPGDGDKVKALDRLVTKKAGFTSSHIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH 284 (486)
Q Consensus 205 ~~~~~~g~~~~~~~~~~~~~~g~~~~~i~~~lA~~LGf~~a~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss 284 (486)
.++|+.||... .++.++.+++++++.|||+.+. ..++.+||+++|++++++.++++|+|||+||++|++
T Consensus 189 ~lGgAvGT~~~---------~~~~~~~~~~~~a~~LGl~~~~--~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~~ 257 (451)
T 3c8t_A 189 EFSGASGTLAS---------LGTRGLDVQRELARELNLGVPS--ITWHSARDAVAETVQFLALVSGSLGKLAMDISIMMT 257 (451)
T ss_dssp CCCCTTSSCGG---------GTTCHHHHHHHHHHHHTCBCCS--SCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCchhhhcCcc---------cccccHHHHHHHHHHhCCCCCC--CCCccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 36667777642 1224588999999999998752 234569999999999999999999999999999999
Q ss_pred --hhhccccccCCCCcCcCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhc
Q psy14319 285 --MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQ 362 (486)
Q Consensus 285 --~~el~~~~~~~~~GSSiMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 362 (486)
||||.+|+.++++|||||||||||+.+|.++++|++++|++++++.. ...|+|||+.+|.
T Consensus 258 ~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~-~~~~~erd~~~~~----------------- 319 (451)
T 3c8t_A 258 TELGEVAEPFVRHRGASSTMPQKQNPVSCELILAGARIVRNHATSMLDA-MIHDFERATGPWH----------------- 319 (451)
T ss_dssp TTTCCEECC---------------CCHHHHHHHHHHHHHHHHHHHHHHH-TCCCTTCCHHHHH-----------------
T ss_pred ccccccccccccCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHhc-CchhhcccccchH-----------------
Confidence 99999999888999999999999999999999999999999998764 5677777764321
Q ss_pred cCCcchhhhhhccCCCCccccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHH
Q psy14319 363 HGKENDLVDRIRADPYFAPILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQ 442 (486)
Q Consensus 363 ~g~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~ 442 (486)
-+|..+++++.++..++..+..|+++|+||++||+
T Consensus 320 ---------------------------------------------~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~ 354 (451)
T 3c8t_A 320 ---------------------------------------------LEWSAVPEGFAVASGILYQAEFMLGGLQVFPDRMR 354 (451)
T ss_dssp ---------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHSCEECHHHHH
T ss_pred ---------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHhCcCEECHHHHH
Confidence 13457899999999999999999999999999999
Q ss_pred HHHhccCChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHhhhc
Q psy14319 443 RHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRVLSHQAGAQ 485 (486)
Q Consensus 443 ~~l~~~~~~~~a~~~~~~L~~~g~~fr~Ah~~v~~~~~~a~~~ 485 (486)
++++.+.++++||+++++|+++ +|||+||++|+++++.|.++
T Consensus 355 ~~l~~s~~~~~ae~l~~~L~~~-ig~~~A~~iv~~~~~~a~~~ 396 (451)
T 3c8t_A 355 ENLDHSRGLIVAEAVMMALAPH-TGRKEAHDIVYLGCRRAVED 396 (451)
T ss_dssp HHHTTTTTGGGHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhccChHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 99999999999999998653
No 10
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1
Probab=100.00 E-value=1e-35 Score=315.74 Aligned_cols=204 Identities=22% Similarity=0.217 Sum_probs=166.5
Q ss_pred CCCCCCcccccccccCCCCCCCcHHHHHHHHHHHcCCCCCccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Q psy14319 206 IPDNRLSSHHTTKRSGRPGDGDKVKALDRLVTKKAGFTSSHIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH- 284 (486)
Q Consensus 206 ~~~~~g~~~~~~~~~~~~~~g~~~~~i~~~lA~~LGf~~a~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss- 284 (486)
++|..||..+ .++..+.+++++++.|||..+. ..++.+||+++|++++++.++++|+|||+||++|++
T Consensus 196 lGgAvGT~~~---------~~~~~~~~~~~~a~~LG~~~~~--~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~~~ 264 (454)
T 1q5n_A 196 LGGAVGSLAS---------LQDQGSIVVEAYAKQLKLGQTA--CTWHGERDRIVEIASVLGIITGNVGKMARDWSLMMQT 264 (454)
T ss_dssp CCCTTSSCGG---------GTTCHHHHHHHHHHHHTCBCCS--SCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred CchHhhcCcc---------cccccHHHHHHHHHHhCcCCCC--CCCccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5666777532 1223489999999999998752 234569999999999999999999999999999999
Q ss_pred -hhhccccccCCCCcCcCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhcc
Q psy14319 285 -MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQH 363 (486)
Q Consensus 285 -~~el~~~~~~~~~GSSiMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (486)
||||.+|+.++++|||||||||||+.+|.++++|++++|++++++.. ...|+|||+.+|.
T Consensus 265 e~gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~-~~~~~erd~~~~~------------------ 325 (454)
T 1q5n_A 265 EIAEVFEPTAKGRGGSSTMPHKRNPVAAASVLAAANRVPALMSSIYQS-MVQEHERSLGAWH------------------ 325 (454)
T ss_dssp TTCCEECCC-------------CCCHHHHHHHHHHHHHHHHHHHHHHT-TCCCTTSCSSHHH------------------
T ss_pred ccchhccccccCCCCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHh-ccchhcccccchH------------------
Confidence 99999999888999999999999999999999999999999998754 5678888775321
Q ss_pred CCcchhhhhhccCCCCccccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHHH
Q psy14319 364 GKENDLVDRIRADPYFAPILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQR 443 (486)
Q Consensus 364 g~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~ 443 (486)
.+|..+++++.++..++..+..|+++|+||++||++
T Consensus 326 --------------------------------------------~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~ 361 (454)
T 1q5n_A 326 --------------------------------------------AEWLSLPEIFQLTAGALERTLDVLKGMEVNAENMHQ 361 (454)
T ss_dssp --------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHH
T ss_pred --------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHCcCEECHHHHHH
Confidence 134578999999999999999999999999999999
Q ss_pred HHhccCChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHhhh
Q psy14319 444 HIDQELPFMATENIIMAMVKAGGDRQVCHEKIRVLSHQAGA 484 (486)
Q Consensus 444 ~l~~~~~~~~a~~~~~~L~~~g~~fr~Ah~~v~~~~~~a~~ 484 (486)
+++.+.++++||+++++|+++ +|||+||++|+++++.|.+
T Consensus 362 ~l~~s~~~~~ae~l~~~L~~~-ig~~~A~~iv~~~~~~a~~ 401 (454)
T 1q5n_A 362 NIECTHGLIMAEAVMMALAPH-MGRLNAHHVVEAACKTAVA 401 (454)
T ss_dssp HHHTTTTGGGHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCcChhHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 9999999999999999865
No 11
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A
Probab=100.00 E-value=1.1e-35 Score=316.24 Aligned_cols=181 Identities=16% Similarity=0.201 Sum_probs=145.7
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCCCCcc-cccccccHHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSSHIIT-GQTYSRKVDV 80 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~~~~~-~av~~RD~~~ 80 (486)
+|+++|.||.+|+.++.++++.. ++|| +|++|+.++ +|+ ++++++|||..+..++ +++++||+++
T Consensus 177 ~~~~~l~r~~~rL~~~~~~~~~~-~lGg-aA~aGt~~~--~~~----------~~la~~LG~~~~~~n~~~~~~~rD~~~ 242 (468)
T 1k7w_A 177 SHAVALTRDSERLGEVKKRINVL-PLGS-GALAGNPLD--IDR----------EMLRSELEFASISLNSMDAISERDFVV 242 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSEE-CTTC-TTTTCCTTC--CCH----------HHHHHHHTCSEECSCHHHHHHCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc-Cccc-ccccCCCCC--CCh----------HHHHHHcCCCCCCCChHHHHHccHHHH
Confidence 79999999999999999999853 4434 588999985 774 6899999999776555 9999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--cc--ccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHH--hhc
Q psy14319 81 IVTGVLSSLGASIHKLATDLRLLAH--MK--EIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLA--TAS 154 (486)
Q Consensus 81 e~~~~la~la~~LsRlA~DL~l~ss--~~--el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~--~~~ 154 (486)
|++++++.++++|+|||+||++|++ |+ +++++++ +|||||||||||+.+|+++++|+++.|+..+++. .++
T Consensus 243 e~~~~l~~la~~L~kia~Dl~ll~s~e~g~iel~e~~~---~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~ 319 (468)
T 1k7w_A 243 EFLSFATLLMIHLSKMAEDLIIYSTSEFGFLTLSDAFS---TGASLMPQKKNPDSLELIRSKAGRVFGRLASILMVLKGL 319 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSTTTCCEECCGGGC---EEETTEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCC---CCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999996 88 6666653 6999999999999999999999999999987553 468
Q ss_pred cccccCCCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHhhhh
Q psy14319 155 TQWMERTLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKETYS 202 (486)
Q Consensus 155 ~~~~erDl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~erm~~ 202 (486)
|.+||||++++ |..+++++.++..++..+..++++|+||+++|++
T Consensus 320 p~~~~rDl~~~---~~~l~~s~~~~~~~l~~~~~~l~gl~vn~e~m~~ 364 (468)
T 1k7w_A 320 PSTYNKDLQED---KEAVFDVVDTLTAVLQVATGVISTLQISKENMEK 364 (468)
T ss_dssp CSSCCGGGGGH---HHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHH
T ss_pred chHhhhhhhhh---HhHHHHHHHHHHHHHHHHHHHhCCCEECHHHHHH
Confidence 89999999885 3556666555555444444444444444444443
No 12
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A*
Probab=100.00 E-value=2.9e-35 Score=311.21 Aligned_cols=214 Identities=22% Similarity=0.298 Sum_probs=181.9
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCCCCcccccccccHHHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSSHIITGQTYSRKVDVI 81 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~~~~~~av~~RD~~~e 81 (486)
+|+++|.||.+|++++.++++. .++|| ++.+|.++++. ..++++++|||..+..+ |.+.+||+++|
T Consensus 167 ~~~~~l~r~~~rL~~~~~~~~~-~~lGg-AvGt~~~~~~~-----------~~~~~a~~LGl~~~~~~-d~~~~rD~~~e 232 (444)
T 2pfm_A 167 LWYEEMKRNVERFKQAANTVRV-GKLSG-AVGTYANIDPF-----------VEKYVCENLGLEAAPIS-TQTLQRDRHAH 232 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCE-ECCCC-TTSSCTTSCHH-----------HHHHHHHHTTCEECSSC-SSSCCTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-cCCch-hhccCCcCCHH-----------HHHHHHHHhCCCCCCCC-cCccCcHHHHH
Confidence 7999999999999999999975 35545 44455555421 24799999999988766 55669999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--ccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy14319 82 VTGVLSSLGASIHKLATDLRLLAH--MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWME 159 (486)
Q Consensus 82 ~~~~la~la~~LsRlA~DL~l~ss--~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~e 159 (486)
++++++.++++|+|||+||++|++ |+|+.+|+.++++|||||||||||+.+|+++++|+++.|+..+++ .+++++||
T Consensus 233 ~~~~l~~la~~L~kia~Dl~ll~~~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~-~~~~~~~e 311 (444)
T 2pfm_A 233 YMSTLALIATSIEKMAVEIRGLQKSETREVEEAFAKGQKGSSAMPHKRNPIGSENMTGLARVIRGYMMTAY-ENVPLWHE 311 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTTCSEECCCCTTCCSCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHH-HTSCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCcCccCCcccCCHHHHHHHHHHHHHHHHHHHHH-HhCccccc
Confidence 999999999999999999999996 999999998789999999999999999999999999999998754 45799999
Q ss_pred CCCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHhhhhhhcCCCCCCcccccccccCCCCCCCcHHHHHHHHHHH
Q psy14319 160 RTLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKETYSIRIIPDNRLSSHHTTKRSGRPGDGDKVKALDRLVTKK 239 (486)
Q Consensus 160 rDl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~erm~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~i~~~lA~~ 239 (486)
||+++|..+|..+++++.++..++..+..++++|+||++||++.. ....|. ..++.+...+.+.
T Consensus 312 rd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l--~~s~~~--------------~~ae~la~~L~~~ 375 (444)
T 2pfm_A 312 RDISHSSAERVILPDATIALNYMLNRFGNIVKNLTVYPENMKRNM--TRTYGL--------------IYSQRVMLTLIDK 375 (444)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECHHHHHHHH--TTTTTG--------------GGHHHHHHHHHHT
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHH--HhCcCc--------------hHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999842 111222 2467888888775
Q ss_pred -cCCCCCc
Q psy14319 240 -AGFTSSH 246 (486)
Q Consensus 240 -LGf~~a~ 246 (486)
+||+.++
T Consensus 376 gig~~~A~ 383 (444)
T 2pfm_A 376 GMVREEAY 383 (444)
T ss_dssp TCCHHHHH
T ss_pred CCCHHHHH
Confidence 7777653
No 13
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A
Probab=100.00 E-value=2.1e-35 Score=311.26 Aligned_cols=214 Identities=20% Similarity=0.251 Sum_probs=177.2
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCCCCcccccccccHHHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSSHIITGQTYSRKVDVI 81 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~~~~~~av~~RD~~~e 81 (486)
+|+++|.||.+|++++.++++. .++|| ++.+|.++++ ...++++++|||..+..+ |.+.+||+++|
T Consensus 155 ~~~~~l~r~~~rL~~~~~~~~~-~~lGg-AvGt~~~~~~-----------~~~~~~a~~LGl~~~~~~-d~~~~rD~~~e 220 (429)
T 1c3c_A 155 GWYSEMKRNVQRLERAIEEVSY-GKISG-AVGNYANVPP-----------EVEEKALSYLGLKPEPVS-TQVVPRDRHAF 220 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCE-ECCCC-TTSSCSSSCH-----------HHHHHHHHHTTCEECSSC-SSSCCTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCCch-hhcCCccCCH-----------HHHHHHHHHcCCCCCCCC-cCccCcHHHHH
Confidence 7999999999999999999975 35545 4445555542 124799999999988766 55669999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--ccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy14319 82 VTGVLSSLGASIHKLATDLRLLAH--MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWME 159 (486)
Q Consensus 82 ~~~~la~la~~LsRlA~DL~l~ss--~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~e 159 (486)
++++++.++++|+|||+||++|++ |+|+.+|+.++++|||||||||||+.+|+++++|+++.|+..+++ .+++++||
T Consensus 221 ~~~~l~~~a~~L~kia~Dl~ll~~~e~~El~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~-~~~~~~~e 299 (429)
T 1c3c_A 221 YLSTLAIVAAGIERIAVEIRHLQRTEVLEVEEPFRKGQRGSSAMPHKKNPITCERLTGLSRMMRAYVDPSL-ENIALWHE 299 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTTCSEECCCCC-----CCCTTCCCCHHHHHHHHHHHHHHHTHHHHH-HTTCCSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhccccccCCCcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH-hcCCcccc
Confidence 999999999999999999999996 999999998789999999999999999999999999999998754 46789999
Q ss_pred CCCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHhhhhhhcCCCCCCcccccccccCCCCCCCcHHHHHHHHHHH
Q psy14319 160 RTLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKETYSIRIIPDNRLSSHHTTKRSGRPGDGDKVKALDRLVTKK 239 (486)
Q Consensus 160 rDl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~erm~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~i~~~lA~~ 239 (486)
||+++|..+|..+++++.++..++..+..++++|+||++||++.. ....|. ..++.+...+.+.
T Consensus 300 rd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l--~~s~~~--------------~~a~~la~~L~~~ 363 (429)
T 1c3c_A 300 RDISHSSVERYVFPDATQTLYYMIVTATNVVRNMKVNEERMKKNI--DLTKGL--------------VFSQRVLLKLIEK 363 (429)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHH--TTTTTG--------------GGHHHHHHHHHHT
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHCcCeeCHHHHHHHH--HhccCh--------------HHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999842 111222 2467888888775
Q ss_pred -cCCCCCc
Q psy14319 240 -AGFTSSH 246 (486)
Q Consensus 240 -LGf~~a~ 246 (486)
+||+.+|
T Consensus 364 gig~~~A~ 371 (429)
T 1c3c_A 364 GLTRKEAY 371 (429)
T ss_dssp TCCHHHHH
T ss_pred CCCHHHHH
Confidence 7777653
No 14
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1
Probab=100.00 E-value=1e-35 Score=311.19 Aligned_cols=188 Identities=27% Similarity=0.381 Sum_probs=159.2
Q ss_pred HHHHHHHHHHHcCCCCCcccccccc-CccHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhhccccccCCCCcCcCCCCC
Q psy14319 229 VKALDRLVTKKAGFTSSHIITGQTY-SRKVDVIVTGVLSSLGASIHKLATDLRLLAH--MKEIEEPFESTQIGSSAMAYK 305 (486)
Q Consensus 229 ~~~i~~~lA~~LGf~~a~~~~~~~~-~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss--~~el~~~~~~~~~GSSiMPqK 305 (486)
.+.+++++++.|||..+. ..++. +||+++|++++++.++++|+|||+||++|++ |||+.+| . +||||||||
T Consensus 195 ~~~~~~~~a~~lGl~~~~--~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~~~e~~ei~lp---~-~GSSiMP~K 268 (403)
T 1dof_A 195 GLEVRRRVAERLGLPHHV--ITTQVAPRESFAVLASALALMAAVFERLAVEIRELSRPEIGEVVEG---G-GGSSAMPHK 268 (403)
T ss_dssp HHHHHHHHHHHTTCCBCS--SCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCSEESC---C----------
T ss_pred cHHHHHHHHHHhCcCCCC--CcchhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCeEeCC---C-CccCCCCCC
Confidence 488999999999998752 33456 9999999999999999999999999999999 9999987 4 999999999
Q ss_pred CCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccCCcchhhhhhccCCCCcccccc
Q psy14319 306 RNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHGKENDLVDRIRADPYFAPILNQ 385 (486)
Q Consensus 306 rNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~ 385 (486)
|||+.+|.++++|++++|+..+++.. ...|+|||+.+|.
T Consensus 269 ~NP~~~E~i~~~a~~v~g~~~~~~~~-~~~~~erd~~~~~---------------------------------------- 307 (403)
T 1dof_A 269 ANPTASERIVSLARYVRALTHVAFEN-VALWHERDLTNSA---------------------------------------- 307 (403)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHT-TCCCTTCCGGGHH----------------------------------------
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHc-CcccccccccchH----------------------------------------
Confidence 99999999999999999999988764 5577777764321
Q ss_pred CCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHHHHHhccCChhHHHHHHHHHHHcC
Q psy14319 386 MPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAG 465 (486)
Q Consensus 386 ~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~~~~~a~~~~~~L~~~g 465 (486)
.+|..+++++.++..++..+..++++|+||++||+++++.+.++++||+++++|+++|
T Consensus 308 ----------------------~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~s~~~~~a~~l~~~L~~~g 365 (403)
T 1dof_A 308 ----------------------NERVWIPEALLALDEILTSALRVLKNVYIDEERITENLQKALPYILTEFHMNRMIKEG 365 (403)
T ss_dssp ----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred ----------------------HHHHHHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHHhccCHHHHHHHHHHHhhcC
Confidence 1345889999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHhhhc
Q psy14319 466 GDRQVCHEKIRVLSHQAGAQ 485 (486)
Q Consensus 466 ~~fr~Ah~~v~~~~~~a~~~ 485 (486)
+|||+||++|++++++|.++
T Consensus 366 ig~~~A~~iv~~~~~~a~~~ 385 (403)
T 1dof_A 366 ASRAEAYKKAKEVKALTFEY 385 (403)
T ss_dssp CCHHHHHHHHTTCCCCCCGG
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 99999999999998887553
No 15
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1
Probab=100.00 E-value=3.5e-35 Score=311.66 Aligned_cols=216 Identities=21% Similarity=0.184 Sum_probs=169.0
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCCCCcccccccccHHHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSSHIITGQTYSRKVDVI 81 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~~~~~~av~~RD~~~e 81 (486)
+|+++|.||.+|+.++.++++. .++|| ++.+|.+++. .+ ....++++++|||..+..++. .+||+++|
T Consensus 172 ~~~~~l~r~~~rL~~~~~~~~~-~~lGg-AvGT~~~~~~-~~-------~~~~~~~a~~LG~~~~~~~~~--~~rD~~~e 239 (454)
T 1q5n_A 172 RWASAFKRDLDRINAIKARVLV-AQLGG-AVGSLASLQD-QG-------SIVVEAYAKQLKLGQTACTWH--GERDRIVE 239 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSB-CCCCC-TTSSCGGGTT-CH-------HHHHHHHHHHHTCBCCSSCCS--SCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcc-cCCch-HhhcCccccc-cc-------HHHHHHHHHHhCcCCCCCCCc--cCcHHHHH
Confidence 7999999999999999999985 35545 4444444421 11 112579999999998876553 39999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--ccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy14319 82 VTGVLSSLGASIHKLATDLRLLAH--MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWME 159 (486)
Q Consensus 82 ~~~~la~la~~LsRlA~DL~l~ss--~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~e 159 (486)
++++++.++++|+|||+||++|++ |+||.+|+.++++|||||||||||+.+|+++++|+++.|+..+++ .+++++||
T Consensus 240 ~~~~l~~la~~L~kia~Dl~ll~~~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~-~~~~~~~e 318 (454)
T 1q5n_A 240 IASVLGIITGNVGKMARDWSLMMQTEIAEVFEPTAKGRGGSSTMPHKRNPVAAASVLAAANRVPALMSSIY-QSMVQEHE 318 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTTCCEECCC-------------CCCHHHHHHHHHHHHHHHHHHHHH-HTTCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhccccccCCCCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHH-Hhccchhc
Confidence 999999999999999999999996 999999997789999999999999999999999999999998755 56899999
Q ss_pred CCCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHhhhhhhcCCCCCCcccccccccCCCCCCCcHHHHHHHHHHH
Q psy14319 160 RTLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKETYSIRIIPDNRLSSHHTTKRSGRPGDGDKVKALDRLVTKK 239 (486)
Q Consensus 160 rDl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~erm~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~i~~~lA~~ 239 (486)
||+++|..+|..+|+++.++..++..+..++++|+||++||++.... ..|. ..++.+...+...
T Consensus 319 rd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~--s~~~--------------~~ae~l~~~L~~~ 382 (454)
T 1q5n_A 319 RSLGAWHAEWLSLPEIFQLTAGALERTLDVLKGMEVNAENMHQNIEC--THGL--------------IMAEAVMMALAPH 382 (454)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHT--TTTG--------------GGHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHHh--CcCh--------------hHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999984211 1222 2367888887777
Q ss_pred cCCCCCc
Q psy14319 240 AGFTSSH 246 (486)
Q Consensus 240 LGf~~a~ 246 (486)
+||+.++
T Consensus 383 ig~~~A~ 389 (454)
T 1q5n_A 383 MGRLNAH 389 (454)
T ss_dssp HCHHHHH
T ss_pred cCHHHHH
Confidence 8888764
No 16
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp}
Probab=100.00 E-value=2.6e-35 Score=310.70 Aligned_cols=215 Identities=20% Similarity=0.204 Sum_probs=169.6
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCCCCcccccccccHHHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSSHIITGQTYSRKVDVI 81 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~~~~~~av~~RD~~~e 81 (486)
+|++.|.||.+|++++.++++. .+++| | .|+.++ +|+ .+.+++++.|||..++ +.+++++||+++|
T Consensus 156 ~~~~~l~r~~~rL~~~~~~~~~-~~lgG--A-vGT~~~--~~~-------~~~~~~a~~LG~~~~~-~~~~v~~rD~~~e 221 (438)
T 4eei_A 156 GAYVEFKRRLKDLKDFQKDGLT-VQFSG--A-VGNYCI--LTT-------EDEKKAADILGLPVEE-VSTQVIPRDRIAK 221 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC-BCCCC--T-TSCCSS--SCH-------HHHHHHHHHHTCCBCS-SCSSSCCTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhH-hcCcc--H-hhCccc--ccH-------HHHHHHHHHcCCCCCC-ccccccccHHHHH
Confidence 6999999999999999999874 35534 4 477764 553 2357999999998554 3478999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--ccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy14319 82 VTGVLSSLGASIHKLATDLRLLAH--MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWME 159 (486)
Q Consensus 82 ~~~~la~la~~LsRlA~DL~l~ss--~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~e 159 (486)
++++++.++++|+|||+||++|++ |+|+.+||+++++|||||||||||+.+|+++++|+++.|+... .+.+++.|||
T Consensus 222 ~~~~l~~~a~~L~kia~Di~ll~~~e~gel~~~f~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~-~~~~~~~~~e 300 (438)
T 4eei_A 222 LISIHGLIASAIERLAVEIRHLHRSDVFEVYEGFSKGQKGSSTMPHKKNPISTENLTGMARMLRSHVSI-ALENCVLWHE 300 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTTCSEECCC------------CCCCHHHHHHHHHHHHHHHHHHH-HHHTTCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccceeccccccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHH-HHhccchhcC
Confidence 999999999999999999999994 9999999988999999999999999999999999999999864 5668899999
Q ss_pred CCCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHhhhhhhcCCCCCCcccccccccCCCCCCCcHHHHHHHHHH-
Q psy14319 160 RTLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKETYSIRIIPDNRLSSHHTTKRSGRPGDGDKVKALDRLVTK- 238 (486)
Q Consensus 160 rDl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~erm~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~i~~~lA~- 238 (486)
||+++|..+|..+++++.++..++.++..++++|+||+++|++..... .|+ ..++.+...+.+
T Consensus 301 rdl~~~~~er~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~--~~~--------------~~a~~~a~~Lv~~ 364 (438)
T 4eei_A 301 RDISHSSAERFYLPDNFGIMVYALRRMKNTIDNLVVQRDIIEDRVRST--SAY--------------LSSFYLHFLVANT 364 (438)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHC--CTT--------------HHHHHHHHHHHHS
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhc--cCH--------------HHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999842111 122 135677777654
Q ss_pred HcCCCCCcc
Q psy14319 239 KAGFTSSHI 247 (486)
Q Consensus 239 ~LGf~~a~~ 247 (486)
.+||+.+|.
T Consensus 365 g~~~~~Ah~ 373 (438)
T 4eei_A 365 PFMREDCYK 373 (438)
T ss_dssp SCCHHHHHH
T ss_pred CCCHHHHHH
Confidence 467766543
No 17
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1
Probab=100.00 E-value=6.1e-35 Score=309.44 Aligned_cols=216 Identities=19% Similarity=0.159 Sum_probs=173.9
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCCCCcccccccccHHHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSSHIITGQTYSRKVDVI 81 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~~~~~~av~~RD~~~e 81 (486)
+|+++|.||.+|++++.++++. .++|| | .|+..+ +|+ + ...+.++++++|||..+..+ ++++||+++|
T Consensus 168 ~~~~~l~r~~~rL~~~~~~~~~-~~lGG--A-vGt~~~--~~~---~-~~~~~~~la~~LG~~~~~~~--~~~~rD~~~e 235 (450)
T 1re5_A 168 GVLGALTRHRQRLQELRPRLLV-LQFGG--A-SGSLAA--LGS---K-AMPVAEALAEQLKLTLPEQP--WHTQRDRLVE 235 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSB-CCCCC--T-TSSCGG--GGG---G-HHHHHHHHHHHHTCBCCSSC--CTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhh-cCCcc--h-hcCCcc--cCc---c-hHHHHHHHHHHhCcCCCCcc--cccccHHHHH
Confidence 7999999999999999999985 35544 3 555553 442 1 12245799999999988754 4779999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--ccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy14319 82 VTGVLSSLGASIHKLATDLRLLAH--MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWME 159 (486)
Q Consensus 82 ~~~~la~la~~LsRlA~DL~l~ss--~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~e 159 (486)
++++++.++++|+|||+||++|++ |+||.+|+.++++|||||||||||+.+|+++++|+++.|+..+++ .+++.+||
T Consensus 236 ~~~~l~~la~~L~kia~Dl~ll~~~e~~El~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~-~~~~~~~e 314 (450)
T 1re5_A 236 FASVLGLVAGSLGKFGRDISLLMQTEAGEVFEPSAPGKGGSSTMPHKRNPVGAAVLIGAATRVPGLLSTLF-AAMPQEHE 314 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTTCCEECCCCC----------CCCCHHHHHHHHHHHHHHHHHHHHH-HTCCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcceeecccccCCCccccCCCCcCCHHHHHHHHHHHHHHHHHHHHH-HhChhhcc
Confidence 999999999999999999999996 999999997789999999999999999999999999999998755 56789999
Q ss_pred CCCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHhhhhhhcCCCCCCcccccccccCCCCCCCcHHHHHHHHHHH
Q psy14319 160 RTLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKETYSIRIIPDNRLSSHHTTKRSGRPGDGDKVKALDRLVTKK 239 (486)
Q Consensus 160 rDl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~erm~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~i~~~lA~~ 239 (486)
||+++|..+|..+++++.++..++.++..++++|+||++||++.. ....|.. .++.+...+.+.
T Consensus 315 rd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l--~~s~~~~--------------~Ae~l~~~L~~g 378 (450)
T 1re5_A 315 RSLGLWHAEWETLPDICCLVSGALRQAQVIAEGMEVDAARMRRNL--DLTQGLV--------------LAEAVSIVLAQR 378 (450)
T ss_dssp BCSSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHH--TTSTTGG--------------GHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHH--HhCcChh--------------HHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999842 1112222 367888888888
Q ss_pred cCCCCCc
Q psy14319 240 AGFTSSH 246 (486)
Q Consensus 240 LGf~~a~ 246 (486)
+||+.+|
T Consensus 379 ig~~~A~ 385 (450)
T 1re5_A 379 LGRDRAH 385 (450)
T ss_dssp SCHHHHH
T ss_pred CCHHHHH
Confidence 8888764
No 18
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP}
Probab=100.00 E-value=5.6e-35 Score=309.72 Aligned_cols=216 Identities=19% Similarity=0.201 Sum_probs=166.7
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCCCCcccccccccHHHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSSHIITGQTYSRKVDVI 81 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~~~~~~av~~RD~~~e 81 (486)
+|+++|.||.+|++++.++++. .++|| ++.+|.+++. .+ ....++++++|||..+..++. .+||+++|
T Consensus 166 ~~~~~l~r~~~rL~~~~~~~~~-~~lGg-AvGT~~~~~~-~~-------~~~~~~~a~~LGl~~~~~~~~--~~rD~~~e 233 (451)
T 3c8t_A 166 VWLSAFDRHAARLEEISPRVLV-VEFSG-ASGTLASLGT-RG-------LDVQRELARELNLGVPSITWH--SARDAVAE 233 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCB-CCCCC-TTSSCGGGTT-CH-------HHHHHHHHHHHTCBCCSSCCS--SCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcc-cCCch-hhhcCccccc-cc-------HHHHHHHHHHhCCCCCCCCCc--cCcHHHHH
Confidence 7999999999999999999985 35545 3334444421 11 123579999999998876553 39999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--ccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy14319 82 VTGVLSSLGASIHKLATDLRLLAH--MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWME 159 (486)
Q Consensus 82 ~~~~la~la~~LsRlA~DL~l~ss--~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~e 159 (486)
++++++.++++|+|||+||++|++ |+||.+|+.++++|||||||||||+.+|+++++|+++.|+..+++ .+++++||
T Consensus 234 ~~~~l~~la~~L~kia~Dl~ll~~~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~-~~~~~~~e 312 (451)
T 3c8t_A 234 TVQFLALVSGSLGKLAMDISIMMTTELGEVAEPFVRHRGASSTMPQKQNPVSCELILAGARIVRNHATSML-DAMIHDFE 312 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTTCCEECC---------------CCHHHHHHHHHHHHHHHHHHHHH-HHTCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccccccccccccCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHH-hcCchhhc
Confidence 999999999999999999999996 999999997789999999999999999999999999999998755 56889999
Q ss_pred CCCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHhhhhhhcCCCCCCcccccccccCCCCCCCcHHHHHHHHHHH
Q psy14319 160 RTLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKETYSIRIIPDNRLSSHHTTKRSGRPGDGDKVKALDRLVTKK 239 (486)
Q Consensus 160 rDl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~erm~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~i~~~lA~~ 239 (486)
||+++|..+|..+++++.++..++..+..++++|+||++||++.. ....|. ..++.+...+...
T Consensus 313 rd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l--~~s~~~--------------~~ae~l~~~L~~~ 376 (451)
T 3c8t_A 313 RATGPWHLEWSAVPEGFAVASGILYQAEFMLGGLQVFPDRMRENL--DHSRGL--------------IVAEAVMMALAPH 376 (451)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCEECHHHHHHHH--TTTTTG--------------GGHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHH--HhccCh--------------HHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999842 111222 2367888887777
Q ss_pred cCCCCCc
Q psy14319 240 AGFTSSH 246 (486)
Q Consensus 240 LGf~~a~ 246 (486)
+||+.++
T Consensus 377 ig~~~A~ 383 (451)
T 3c8t_A 377 TGRKEAH 383 (451)
T ss_dssp HCHHHHH
T ss_pred CCHHHHH
Confidence 8888764
No 19
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans}
Probab=100.00 E-value=6.1e-34 Score=303.82 Aligned_cols=193 Identities=41% Similarity=0.593 Sum_probs=158.9
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCc------ccccchhhhhhhhhhhhHHHHHHcCCCCCCCccccccc
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQT------YSRKVDVIVTGVLSSLGASIHKKAGFNSSHIITGQTYS 75 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~------~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~~~~~~av~~ 75 (486)
+|+++|.||.+|++++.+++. .+|++| .+|+. || +||.. ...+.++++++|||..+..++.++++
T Consensus 170 ~~~~~l~rd~~rL~~~~~~l~-~lg~gg---~~GT~a~~~~~f~--~d~~~---~~~v~~~~a~~LG~~~~~~~s~~~~~ 240 (478)
T 1yis_A 170 LWAQELLMAFQSLSEFRDKMR-FRGIKG---ATGTQDSFLTLFA--GDESK---VEALDELVTKKANFSNRFLITGQTYS 240 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-BCCSCT---TTSSCHHHHHHTT--TCHHH---HHHHHHHHHHHTTCSCBCSSCSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-Hhcccc---hhccchhhhcccC--cchhh---HHHHHHHHHHHhCcCCCCCccccccC
Confidence 799999999999999999995 467533 35777 75 66521 01223699999999977655568999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy14319 76 RKVDVIVTGVLSSLGASIHKLATDLRLLAHMKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATAST 155 (486)
Q Consensus 76 RD~~~e~~~~la~la~~LsRlA~DL~l~ss~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~ 155 (486)
||+++|++++++.++++|+|||+||++|++|+|+.+||..+++|||||||||||+.+|+++++|+++.|+.++.+..+..
T Consensus 241 rd~~~e~~~~l~~~a~~L~kia~Di~ll~s~~el~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~ 320 (478)
T 1yis_A 241 RQQDSQLVFSLSLLGAAAKKVCTDIRVLQAFGELLEPFEKDQIGSSAMPYKKNPMKSERCCALSRKLINAPQEALTILAD 320 (478)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEECC-------------CCCCHHHHHHHHHHHHHHTSHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeccccCCCCccccCCcccCCHHHHHHHHHHHHHHHhHHHHHHHhcc
Confidence 99999999999999999999999999999999999999878999999999999999999999999999999876777777
Q ss_pred ccccCCCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHhhhhh
Q psy14319 156 QWMERTLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKETYSI 203 (486)
Q Consensus 156 ~~~erDl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~erm~~~ 203 (486)
+|+|||+..|..++..+++++.+++.++.++..|+++|+||+++|++.
T Consensus 321 ~~~er~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~ 368 (478)
T 1yis_A 321 QGLERTLDDSAGRRMLIPDVLLTAEALLTTLQNIFEGLSVQTDNVKKI 368 (478)
T ss_dssp CCTTCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHH
T ss_pred CCcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHH
Confidence 899999999999999999999999999999999999999999999983
No 20
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1
Probab=100.00 E-value=4.6e-34 Score=298.65 Aligned_cols=214 Identities=23% Similarity=0.284 Sum_probs=167.3
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCCCCcccccccccHHHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSSHIITGQTYSRKVDVI 81 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~~~~~~av~~RD~~~e 81 (486)
+|+++|.|| +|++++.++++. .++|| ++.+|.+++. .+ ....++++++|||..+..++ ++++||+++|
T Consensus 158 ~~~~~l~r~-~rL~~~~~~~~~-~~lGg-AvGt~~~~~~-~~-------~~~~~~~a~~lGl~~~~~~~-~~~~rD~~~e 225 (403)
T 1dof_A 158 NYYYELYIA-CRQLALAEEFIR-AKIGG-AVGTMASWGE-LG-------LEVRRRVAERLGLPHHVITT-QVAPRESFAV 225 (403)
T ss_dssp HHHHHHHHH-HHHHHHHHHHCC-BCCCC-TTSSCGGGGG-GH-------HHHHHHHHHHTTCCBCSSCS-SSCCHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHhcc-cCccH-HHhhCccccc-cc-------HHHHHHHHHHhCcCCCCCcc-hhhccHHHHH
Confidence 799999999 999999999985 35545 4445555521 11 12357999999999876443 2249999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--ccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy14319 82 VTGVLSSLGASIHKLATDLRLLAH--MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWME 159 (486)
Q Consensus 82 ~~~~la~la~~LsRlA~DL~l~ss--~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~e 159 (486)
++++++.++++|+|||+||++|++ |+|+.+| + +|||||||||||+.+|+++++|+++.|+..+++ .+++++||
T Consensus 226 ~~~~l~~~a~~L~kia~Dl~ll~~~e~~ei~lp---~-~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~-~~~~~~~e 300 (403)
T 1dof_A 226 LASALALMAAVFERLAVEIRELSRPEIGEVVEG---G-GGSSAMPHKANPTASERIVSLARYVRALTHVAF-ENVALWHE 300 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTTCSEESC---C----------CCCHHHHHHHHHHHHHHHHHHHHH-HTTCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCccCeEeCC---C-CccCCCCCCCCchHHHHHHHHHHHHHHHHHHHH-HcCccccc
Confidence 999999999999999999999996 9999987 4 899999999999999999999999999998754 57889999
Q ss_pred CCCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHhhhhhhcCCCCCCcccccccccCCCCCCCcHHHHHHHHHHH
Q psy14319 160 RTLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKETYSIRIIPDNRLSSHHTTKRSGRPGDGDKVKALDRLVTKK 239 (486)
Q Consensus 160 rDl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~erm~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~i~~~lA~~ 239 (486)
||+++|..+|..+++++.++..++..+..++++|+||++||++.. ....|.. .++.+...+.+.
T Consensus 301 rd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l--~~s~~~~--------------~a~~l~~~L~~~ 364 (403)
T 1dof_A 301 RDLTNSANERVWIPEALLALDEILTSALRVLKNVYIDEERITENL--QKALPYI--------------LTEFHMNRMIKE 364 (403)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHH--HHHHHHH--------------CHHHHHHHHHHT
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHH--HhccCHH--------------HHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999832 0011111 256777777775
Q ss_pred -cCCCCCccc
Q psy14319 240 -AGFTSSHII 248 (486)
Q Consensus 240 -LGf~~a~~~ 248 (486)
+||+.++.+
T Consensus 365 gig~~~A~~i 374 (403)
T 1dof_A 365 GASRAEAYKK 374 (403)
T ss_dssp TCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 888877654
No 21
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A*
Probab=100.00 E-value=2.1e-33 Score=300.89 Aligned_cols=192 Identities=55% Similarity=0.800 Sum_probs=160.2
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCc------ccccchhhhhhhhhhhhHHHHHHcCCCCCCCccccccc
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQT------YSRKVDVIVTGVLSSLGASIHKKAGFNSSHIITGQTYS 75 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~------~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~~~~~~av~~ 75 (486)
+|+++|.||.+|++++.+++. .+|++| .+|+. || +||.. ...+.+++++.|||..+..++.++++
T Consensus 196 ~~~~~l~rd~~RL~~~~~~l~-~lg~gG---~~GT~a~~~~~f~--~D~~~---~~~v~~~~a~~LGl~~~~~~s~~~~~ 266 (503)
T 2j91_A 196 LWIQDLCMDLQNLKRVRDDLR-FRGVKG---TTGTQASFLQLFE--GDDHK---VEQLDKMVTEKAGFKRAFIITGQTYT 266 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-BCCSCC---TTSSCHHHHHHTT--TCHHH---HHHHHHHHHHHTTCSCBCSCCSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHhhc-cccccc---cccchhhhccccC--CchHH---HHHHHHHHHHHhCCCCCCCccccccc
Confidence 699999999999999999995 467533 35777 65 66521 01223699999999977655568999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy14319 76 RKVDVIVTGVLSSLGASIHKLATDLRLLAHMKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATAST 155 (486)
Q Consensus 76 RD~~~e~~~~la~la~~LsRlA~DL~l~ss~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~ 155 (486)
||+++|++++++.++++|+|||+||++|++|+||.+||..+++|||||||||||+.+|+++++|+++.|+.++.+..+..
T Consensus 267 rd~~~e~~~~la~la~~L~kia~Dirll~s~~ei~ep~~~~q~GSSiMP~K~NPv~~E~i~~~a~~v~g~~~~~~~~~~~ 346 (503)
T 2j91_A 267 RKVDIEVLSVLASLGASVHKICTDIRLLANLKEMEEPFEKQQIGSSAMPYKRNPMRSERCCSLARHLMTLVMDPLQTASV 346 (503)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSEECCC-----------CCCCCHHHHHHHHHHHHHHHTTHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHhccceeeccccCCCCCCCCCccccCcHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999876777777
Q ss_pred ccccCCCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHhhhh
Q psy14319 156 QWMERTLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKETYS 202 (486)
Q Consensus 156 ~~~erDl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~erm~~ 202 (486)
+|+|||+..|..+|..+++++.+++.++..+..|+++|+||+++|++
T Consensus 347 ~~~erd~~~s~~~~~~l~~~~~~~~~~l~~~~~~l~gL~vn~erm~~ 393 (503)
T 2j91_A 347 QWFERTLDDSANRRICLAEAFLTADTILNTLQNISEGLVVYPKVIER 393 (503)
T ss_dssp CCTTCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSCEECHHHHHH
T ss_pred CcccccccchHHHHhhHHHHHHHHHHHHHHHHHHHcCCEECHHHHHH
Confidence 89999999999999999999999999999999999999999999998
No 22
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A
Probab=99.97 E-value=3.9e-32 Score=279.91 Aligned_cols=184 Identities=20% Similarity=0.164 Sum_probs=145.9
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCCCCcccccccccHHHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSSHIITGQTYSRKVDVI 81 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~~~~~~av~~RD~~~e 81 (486)
+|++.|.||.+|++++.++++. +++|| ++.+|.+++. ......++++++|||..+. +++++||+++|
T Consensus 170 ~~~~~l~r~~~rL~~~~~~~~~-~~lGg-avGT~~~~~~--------~~~~~~~~~a~~LG~~~~~---~~~~~RD~~~e 236 (359)
T 2fel_A 170 GWIAPLERHLLRLETFAQNGFA-LQFGG-AAGTLEKLGD--------NAGAVRADLAKRLGLADRP---QWHNQRDGIAE 236 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSB-CCCCC-TTSSCTTTGG--------GHHHHHHHHHHHHTCBCCC---CCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-cCCcH-HhccCccCcc--------hHHHHHHHHHHHhCcCCCc---hHHhccHHHHH
Confidence 6999999999999999999874 36645 3444444421 1112357999999999887 46679999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-cccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhccccccC
Q psy14319 82 VTGVLSSLGASIHKLATDLRLLAHM-KEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMER 160 (486)
Q Consensus 82 ~~~~la~la~~LsRlA~DL~l~ss~-~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~er 160 (486)
++++++.++++|+|||+||++|++- +|+.+|+ ++|||||||||||+.+|+++++++++.|++.+ ++.++.+|+||
T Consensus 237 ~~~~l~~~a~~L~kia~Dirll~s~e~Ei~~~~---~~GSS~MP~K~NP~~~E~i~~~a~~v~~~~~~-~~~~~~~~~er 312 (359)
T 2fel_A 237 FANLLSLVTGTLGKFGQDIALMAEIGSEIRLSG---GGGSSAMPHKQNPVNAETLVTLARFNAVQISA-LHQSLVQEQER 312 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEC---------------CCHHHHHHHHHHHHHHHHHHH-HHHTTCCCSSB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCC---CCCCccCCcccCCHHHHHHHHHHHHHHHHHHH-HHHHhhccCCC
Confidence 9999999999999999999999953 6898876 48999999999999999999999999999987 44678999999
Q ss_pred CCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHhhhh
Q psy14319 161 TLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKETYS 202 (486)
Q Consensus 161 Dl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~erm~~ 202 (486)
|...|..+|..+|+++.+++.+|..+..++++|+||++||..
T Consensus 313 ~~~~~~~e~~~lp~~~~~~~~~L~~~~~v~~~l~v~~~~m~~ 354 (359)
T 2fel_A 313 SGAGWMLEWLTLPQMVTATGTSLLVAERLAAQIDRLGADESH 354 (359)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC----
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHhCc
Confidence 999999999999999999999999999999999999999964
No 23
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A
Probab=99.97 E-value=2.7e-31 Score=282.21 Aligned_cols=191 Identities=16% Similarity=0.088 Sum_probs=163.1
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCC--CCcccccccccHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSS--HIITGQTYSRKVD 79 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~--~~~~~av~~RD~~ 79 (486)
+|+++|.||.+|++++.++++.. ++| .+|+ |+.++ +|+. ....+-+++|++|||..+ .|+++++++||++
T Consensus 203 ~~~~~l~r~~~rL~~~~~~l~~~-~lG-gtAv-GT~~~--~~~~---~~~~v~~~la~~LGl~~~~~~n~~~a~~~rD~~ 274 (467)
T 1fur_A 203 GWVAMLEHNLKHIEYSLPHVAEL-ALG-GTAV-GTGLN--THPE---YARRVADELAVITCAPFVTAPNKFEALATCDAL 274 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTEE-CTT-CTTT-SSCTT--SCTT---HHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc-CcC-cchh-cCCcc--CChh---HHHHHHHHHHHHhCCCCccCCCHHHHHhcCHHH
Confidence 79999999999999999999853 442 3477 88885 6641 111233479999999953 3677999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14319 80 VIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATAS 154 (486)
Q Consensus 80 ~e~~~~la~la~~LsRlA~DL~l~ss-----~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~ 154 (486)
+|++++++.++++|+|||+||++|+| |+||.+|+ +++|||||||||||+.+|+++++|+++.|+..+++..+.
T Consensus 275 ~e~~~~l~~la~~L~kia~Dl~ll~S~~r~~~gei~lp~--~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~ 352 (467)
T 1fur_A 275 VQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPE--NEPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGA 352 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCSEECCC--CSCCCTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccCceeEECCC--CCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999994 99999986 569999999999999999999999999999998776666
Q ss_pred cccccCCCchhhHhhhchHHHHHHHHHHHHHH-HHhhhccccCHHhhhhh
Q psy14319 155 TQWMERTLDDSANRRLTLSESFLTTDCLLITL-QNVLEGLVVYPKETYSI 203 (486)
Q Consensus 155 ~~~~erDl~~~~~~~~~l~~a~~~~~~~l~~~-~~vl~~l~vn~erm~~~ 203 (486)
.+|+|++...+..++. +++++.++..++..+ ..++++|+||++||++.
T Consensus 353 ~g~~e~~~~~~~~~~~-l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~ 401 (467)
T 1fur_A 353 SGNFELNVFRPMVIHN-FLQSVRLLADGMESFNKHCAVGIEPNRERINQL 401 (467)
T ss_dssp TCBTTBCCCHHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHH
T ss_pred cCCccccchhhHHHHH-HHHHHHHHHHHHHHHHHHHHccCeeCHHHHHHH
Confidence 7899999999988754 568888888888888 66999999999999983
No 24
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1
Probab=99.97 E-value=4.6e-31 Score=280.46 Aligned_cols=191 Identities=15% Similarity=0.134 Sum_probs=163.1
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCC-C-CCcccccccccHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNS-S-HIITGQTYSRKVD 79 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~-~-~~~~~av~~RD~~ 79 (486)
+|+++|.||.+|++++.++++.. ++| .+|+ |+.++ +|+. ....+-++++++|||.. + .++.+++++||++
T Consensus 203 ~~~~~l~r~~~RL~~~~~~~~~~-~lG-g~Av-GT~~~--~~~~---~~~~v~~~la~~LG~~~~~~~n~~~a~~~rD~~ 274 (466)
T 1vdk_A 203 SWAAQLKTTLAAVKEMEKGLYNL-AIG-GTAV-GTGLN--AHPR---FGELVAKYLAEETGLPFRVAENRFAALAAHDEL 274 (466)
T ss_dssp HHHHHHHHHHHHHHHHHGGGGEE-CTT-CTTT-SSCTT--SCTT---HHHHHHHHHHHHHSSCCEECSCTTHHHHCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc-CCC-cccc-CCCcc--CCch---HHHHHHHHHHHHcCCCCCCCcchHHHHhccHHH
Confidence 79999999999999999999853 442 4566 88885 6641 11223347999999995 3 4567999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14319 80 VIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATAS 154 (486)
Q Consensus 80 ~e~~~~la~la~~LsRlA~DL~l~ss-----~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~ 154 (486)
+|++++++.++++|+|||+||++|+| |+||.+|+ +++|||||||||||+.+|+++++|+++.|+..+++....
T Consensus 275 ~e~~~~l~~la~~L~kia~Dl~ll~S~~r~~~gei~lp~--~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~ 352 (466)
T 1vdk_A 275 VNVMGAIRTLAGALMKIGNDVRWLASGPYAGIGEITIPA--NEPGSSIMPGKVNPTQVEALTMVVVRVYGNDHTVAFAGS 352 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCBSSSSCCSEECCC--CSCCSSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceeEECCC--CCCcCCCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999999999994 99999987 479999999999999999999999999999998776655
Q ss_pred cccccCCCchhhHhhhchHHHHHHHHHHHHHH-HHhhhccccCHHhhhhh
Q psy14319 155 TQWMERTLDDSANRRLTLSESFLTTDCLLITL-QNVLEGLVVYPKETYSI 203 (486)
Q Consensus 155 ~~~~erDl~~~~~~~~~l~~a~~~~~~~l~~~-~~vl~~l~vn~erm~~~ 203 (486)
.++++++...+.. +..+++++..+..++..+ ..|+++|+||++||++.
T Consensus 353 ~g~~e~~~~~~~~-~~~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~ 401 (466)
T 1vdk_A 353 QGNFQLNVYKPVM-AYSTLESINLLADAVASFDAHLAQGIEPNLERIEEY 401 (466)
T ss_dssp TCBTTBCSCHHHH-HHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHH
T ss_pred ccchhhhhhhHHH-HHHHHHHHHHHHHHHHHHHHHHhccCEEcHHHHHHH
Confidence 5788998888775 667889999999999999 56999999999999984
No 25
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1
Probab=99.97 E-value=1.1e-30 Score=278.49 Aligned_cols=191 Identities=18% Similarity=0.204 Sum_probs=162.1
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCC-C-CCcccccccccHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNS-S-HIITGQTYSRKVD 79 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~-~-~~~~~av~~RD~~ 79 (486)
+|+++|.||.+|++++.++++.. ++| .+|+ |+.++ +|+.. -..+.++++++|||.. + .++.|++++||++
T Consensus 206 ~~~~~l~rd~~RL~~~~~~~~~~-~lG-g~Av-GT~~~--~~~~~---~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~ 277 (478)
T 1jsw_A 206 AFSILLKEEVKNIQRTAELLLEV-NLG-ATAI-GTGLN--TPKEY---SPLAVKKLAEVTGFPCVPAEDLIEATSDCGAY 277 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEE-CCS-CCSS-SSCSS--CTTTH---HHHHHHHHHHHHCCCCEECSCSSSBTTBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccC-CCC-Cccc-cCCcc--CCcch---HHHHHHHHHHHcCCCCCcCCCHHHHHhccHHH
Confidence 79999999999999999999853 442 4566 88775 66411 1223347999999994 3 4567999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14319 80 VIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATAS 154 (486)
Q Consensus 80 ~e~~~~la~la~~LsRlA~DL~l~ss-----~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~ 154 (486)
+|++++++.++++|+|||+||++|+| |+||.+|+ +++|||||||||||+.+|+++++|+++.|+..+++....
T Consensus 278 ~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gei~lp~--~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~ 355 (478)
T 1jsw_A 278 VMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPE--LQAGSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTMAAE 355 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSTTTSCCCEECCC--CSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccCceeEECCC--CCCCCCCCCcccCCHHHHHHHHHHHHHHhHHHHHHHHHh
Confidence 99999999999999999999999993 99999986 789999999999999999999999999999998766666
Q ss_pred cccccCCCchhhHhhhchHHHHHHHHHHHHHHH-HhhhccccCHHhhhhh
Q psy14319 155 TQWMERTLDDSANRRLTLSESFLTTDCLLITLQ-NVLEGLVVYPKETYSI 203 (486)
Q Consensus 155 ~~~~erDl~~~~~~~~~l~~a~~~~~~~l~~~~-~vl~~l~vn~erm~~~ 203 (486)
.+++++++..+. .+..+++++.++..++..+. .++++|+||++||++.
T Consensus 356 ~~~~e~~~~~p~-~~~~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~ 404 (478)
T 1jsw_A 356 AGQLQLNVMEPV-IGQAMFESVHILTNACYNLLEKCINGITANKEVCEGY 404 (478)
T ss_dssp TCBTTBCTTHHH-HHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHH
T ss_pred ccchhhcccchH-HHHHHHHHHHHHHHHHHHHHHHHHccCeecHHHHHHH
Confidence 678999987754 34568899999999999997 6999999999999984
No 26
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii}
Probab=99.97 E-value=5.1e-31 Score=279.37 Aligned_cols=191 Identities=17% Similarity=0.143 Sum_probs=165.9
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCC--CCcccccccccHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSS--HIITGQTYSRKVD 79 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~--~~~~~av~~RD~~ 79 (486)
+|+++|.||.+|++++.++++. +++|| +|+ |+.++ +|+. ....+.++++++|||..+ .++.+++++||++
T Consensus 224 ~~~~~l~rd~~RL~~~~~~l~~-~~lGg-tAv-GT~~~--~~~~---~~~~v~~~la~~lGl~~~~~~n~~da~~~rD~~ 295 (482)
T 3gtd_A 224 GYITQIEYALERIEDALKKVYL-LAQGG-TAV-GTGIN--SKIG---FDIKFAQKVAEFTQQPFKTAPNKFESLAAHDAL 295 (482)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTE-ECTTC-TTT-SSCTT--SCTT---HHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hCCCC-ccc-cCCCc--CCch---hHHHHHHHHHHHhCCCCccccchhhhhcCcHHH
Confidence 6999999999999999999975 35534 455 88774 4431 011223589999999974 4567999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14319 80 VIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATAS 154 (486)
Q Consensus 80 ~e~~~~la~la~~LsRlA~DL~l~ss-----~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~ 154 (486)
+|++++++.++++|+|||+||++|+| |+||.+| ++++|||||||||||+.+|.++++|+++.|+..++.+.+.
T Consensus 296 ~e~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp--~~~~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~ 373 (482)
T 3gtd_A 296 VEFSGTLNTIAVSLMKIANDIRLLGSGPRCGLGELHLP--ENEPGSSIMPGKVNPTQVEALTMVCTQVMGNHVTVTIAGS 373 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECC--CCSCCCSSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccCeeEEECC--CCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999994 9999887 4689999999999999999999999999999988777888
Q ss_pred cccccCCCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHhhhh
Q psy14319 155 TQWMERTLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKETYS 202 (486)
Q Consensus 155 ~~~~erDl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~erm~~ 202 (486)
.+++|++...+...+..++++..+.+.++.+...|+++|+||++||++
T Consensus 374 ~g~~eln~~~pl~~~~~l~s~~ll~~~~~~~~~~~v~gl~vn~erm~~ 421 (482)
T 3gtd_A 374 NGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIARINT 421 (482)
T ss_dssp CCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCEECHHHHHH
T ss_pred cccchhcccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHH
Confidence 899999998888888899999999999999999999999999999998
No 27
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1
Probab=99.97 E-value=2.2e-30 Score=275.98 Aligned_cols=191 Identities=18% Similarity=0.158 Sum_probs=161.4
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCC--CCcccccccccHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSS--HIITGQTYSRKVD 79 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~--~~~~~av~~RD~~ 79 (486)
+|+++|.||.+|++++.+++... ++| .+|+ |+.++ +|+. ....+-+++|++|||..+ .++.+++++||++
T Consensus 228 ~~~~~l~rd~~RL~~~~~~l~~~-~lG-gtAv-GT~~~--~~~~---~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~ 299 (488)
T 1yfm_A 228 GYVQQVENGIQRVAHSLKTLSFL-AQG-GTAV-GTGLN--TKPG---FDVKIAEQISKETGLKFQTAPNRFEALAAHDAI 299 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTEE-CTT-CTTT-SSCTT--SCTT---HHHHHHHHHHHHHSSCCEECSCHHHHHHCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc-CCC-Cccc-cCCcc--CChh---HHHHHHHHHHHHhCCCCccCccHHHHHhccHHH
Confidence 79999999999999999999853 442 4566 88875 6541 111233478999999963 3556999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14319 80 VIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATAS 154 (486)
Q Consensus 80 ~e~~~~la~la~~LsRlA~DL~l~ss-----~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~ 154 (486)
+|++++++.++++|+|||+||++|+| |+||.+|+ +++|||||||||||+.+|.++++|+++.|+..+++..+.
T Consensus 300 ~e~~~~L~~la~~L~Kia~DlrllsS~pr~g~gei~lp~--~~~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~ 377 (488)
T 1yfm_A 300 VECSGALNTLACSLFKIAQDIRYLGSGPRCGYHELMLPE--NEPGSSIMPGKVNPTQNEALTQVCVQVMGNNAAITFAGS 377 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECCC--CSCCCTTSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCceeEECCC--CCCcCCCcccccCcHHHHHHHHHHHHHHhHHHHHHHHHh
Confidence 99999999999999999999999994 99999986 579999999999999999999999999999998776666
Q ss_pred cccccCCCchhhHhhhchHHHHHHHHHHHHHH-HHhhhccccCHHhhhhh
Q psy14319 155 TQWMERTLDDSANRRLTLSESFLTTDCLLITL-QNVLEGLVVYPKETYSI 203 (486)
Q Consensus 155 ~~~~erDl~~~~~~~~~l~~a~~~~~~~l~~~-~~vl~~l~vn~erm~~~ 203 (486)
.++++++...+.. +..+++++.++..++..+ ..|+++|+||++||++.
T Consensus 378 ~g~~eln~~~p~~-~~~l~~s~~~l~~~l~~~~~~~i~gl~vn~erm~~~ 426 (488)
T 1yfm_A 378 QGQFELNVFKPVM-IANLLNSIRLITDAAYSFRVHCVEGIKANEPRIHEL 426 (488)
T ss_dssp CCBTTBCSCHHHH-HHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHH
T ss_pred cccchhhhhhHHH-HHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHH
Confidence 6789998888765 556788889888888888 56999999999999883
No 28
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=276.60 Aligned_cols=191 Identities=18% Similarity=0.183 Sum_probs=159.8
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCC--CCcccccccccHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSS--HIITGQTYSRKVD 79 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~--~~~~~av~~RD~~ 79 (486)
+|+++|.||.+|++++.++++. +++|| +|+ |+.++ +|+. ....+.++++++|||..+ .++++++++||++
T Consensus 230 ~~a~~l~rd~~RL~~~~~~l~~-~~lGg-tAv-GTg~~--~~~~---~~~~v~~~la~~lGl~~~~~~n~~da~~~rD~~ 301 (490)
T 3e04_A 230 GYVQQVKYAMTRIKAAMPRIYE-LAAGG-TAV-GTGLN--TRIG---FAEKVAAKVAALTGLPFVTAPNKFEALAAHDAL 301 (490)
T ss_dssp HHHHHHHHHHHHHHHTCTTTSE-ECTTC-TTT-SSCTT--SCTT---HHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hCCCC-ccc-cCCCc--CChh---HHHHHHHHHHHHhCCCCcCCCCHHHHHhccHHH
Confidence 6999999999999999999975 34433 455 88764 4431 111234589999999963 4567999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14319 80 VIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATAS 154 (486)
Q Consensus 80 ~e~~~~la~la~~LsRlA~DL~l~ss-----~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~ 154 (486)
+|++++++.++++|+|||+||++|+| |+||.+| +.++|||||||||||+.+|.++++|+++.|+..++.+.+.
T Consensus 302 ve~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp--~~~~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~ai~~a~~ 379 (490)
T 3e04_A 302 VELSGAMNTTACSLMKIANDIRFLGSGPRSGLGELILP--ENEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGS 379 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECC--CCSCC-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEECC--CCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999995 9999887 4689999999999999999999999999999988777888
Q ss_pred cccccCCCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHhhhh
Q psy14319 155 TQWMERTLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKETYS 202 (486)
Q Consensus 155 ~~~~erDl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~erm~~ 202 (486)
.+++|++...+...+..++++..+.+.++.+...|+++|+||++||++
T Consensus 380 ~g~~eln~~~p~~~~~ll~s~~ll~~~~~~~~~~~v~gl~vn~erm~~ 427 (490)
T 3e04_A 380 NGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINK 427 (490)
T ss_dssp TCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHH
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHH
Confidence 889999998888778888889899999999999999999999999998
No 29
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A
Probab=99.97 E-value=3.1e-30 Score=273.71 Aligned_cols=191 Identities=18% Similarity=0.216 Sum_probs=158.2
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCC--CCcccccccccHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSS--HIITGQTYSRKVD 79 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~--~~~~~av~~RD~~ 79 (486)
+|+++|.||.+|++++.+++... ++|| +|+ |+.++ +|+.. -....++++++|||..+ .|.++++++||++
T Consensus 203 ~~~~~l~rd~~RL~~~~~~l~~~-~lGg-tAv-GT~~~--~~~~~---~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~ 274 (468)
T 3r6q_A 203 AYARVIARDIERIANTRNNLYDI-NMGA-TAV-GTGLN--ADPEY---ISIVTEHLAKFSGHPLRSAQHLVDATQNTDCY 274 (468)
T ss_dssp HHHHHHHHHHHHHHHTHHHHTEE-CTTC-TTT-SSCTT--CCHHH---HHHHHHHHHHHHCSCCEECSCHHHHHHCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc-CCCC-eec-CCCCC--CChHH---HHHHHHHHHHHhCCCCccccchHHHHhccHHH
Confidence 79999999999999999999853 4423 466 87774 55411 11123467999999964 4667999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14319 80 VIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATAS 154 (486)
Q Consensus 80 ~e~~~~la~la~~LsRlA~DL~l~ss-----~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~ 154 (486)
+|++++++.++++|+|||+||++|+| |+||.+| ..++|||||||||||+.+|.++++|+++.|+..++.+...
T Consensus 275 ~e~~~~l~~la~~L~Kia~DlrllsS~pr~g~gei~lp--~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~a~~ 352 (468)
T 3r6q_A 275 TEVSSALKVCMINMSKIANDLRLMASGPRAGLSEIVLP--ARQPGSSIMPGKVNPVMPEVMNQVAFQVFGNDLTITSASE 352 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSCCCEECC--CCSCCCTTSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeEEECC--CCCCCCCCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999999999994 9999987 3689999999999999999999999999999988666655
Q ss_pred cccccCCCchhhHhhhchHHHHHHHHHHHHHHH-HhhhccccCHHhhhhh
Q psy14319 155 TQWMERTLDDSANRRLTLSESFLTTDCLLITLQ-NVLEGLVVYPKETYSI 203 (486)
Q Consensus 155 ~~~~erDl~~~~~~~~~l~~a~~~~~~~l~~~~-~vl~~l~vn~erm~~~ 203 (486)
.++++++...+. .+..+++++.++..++..+. .|+++|+||++||++.
T Consensus 353 ~g~~eln~~~p~-i~~~l~~s~~~l~~~l~~~~~~~i~gl~vn~erm~~~ 401 (468)
T 3r6q_A 353 AGQFELNVMEPV-LFFNLIQSISIMTNVFKSFTENCLKGIKANEERMKEY 401 (468)
T ss_dssp TCBTTBCTTHHH-HHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHH
T ss_pred cCchhhhhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHH
Confidence 567777654432 24457899999999999999 9999999999999984
No 30
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A
Probab=99.97 E-value=1.8e-30 Score=276.03 Aligned_cols=186 Identities=15% Similarity=0.116 Sum_probs=147.5
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccC------cccccchhhhhhhhhhhhHHHHH-HcCCCCCCCcccccc
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQ------TYSRKVDVIVTGVLSSLGASIHK-KAGFNSSHIITGQTY 74 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~------~~~r~~d~~~~Gt~a~~~~~~a~-~LGf~~~~~~~~av~ 74 (486)
+|+++|.||.+|++++. ..|. +++|+ |+ +|| .+||. .+.+.+++ +|||..+.. .++++
T Consensus 185 ~~~~~l~r~~~rL~~~~-----~~~~-~~GAv-GT~~a~~~~~p-~~d~~------~~~~~~~~~~LGl~~~~~-~~~~~ 249 (465)
T 2qga_B 185 NFYARIHHHVGVIRRVK-----VCAK-FNGAV-GNFNAHKVASK-DTDWV------NTIGLFLKKHFNLTYSIY-CTQIQ 249 (465)
T ss_dssp HHHHHHHHHHHHHHHSC-----CEEC-CCCTT-SSCHHHHHHCT-TCCHH------HHHHHHHHHHHCCEECCC-CSSSC
T ss_pred HHHHHHHHHHHHHHHHH-----Hhcc-ccchh-cCccccccccC-cccHH------HHHHHHHHHHhCCCCCCC-ccchh
Confidence 69999999999999876 1232 24666 77 333 23331 12344444 599987764 48899
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14319 75 SRKVDVIVTGVLSSLGASIHKLATDLRLLAHMKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATAS 154 (486)
Q Consensus 75 ~RD~~~e~~~~la~la~~LsRlA~DL~l~ss~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~ 154 (486)
+||+++|++++++.++++|+|||+||++|++-+++.++++++++|||||||||||+.+|+++++++.+.+....++....
T Consensus 250 ~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~~~~~e~~~~~~~GSSiMP~K~NP~~~e~~~g~~~~~~~~~~~~~~~l~ 329 (465)
T 2qga_B 250 DHDYICELCDGLARANGTLIDLCVDIWLYISNNLLKLKVKEKEVGSSTMPHKVNPIDFENAEGNLHIANAFFKLFSSKLP 329 (465)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEC-------CCSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceeeeCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999984446677788999999999999999999999999999998876554445
Q ss_pred cccccCCCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHhhhhh
Q psy14319 155 TQWMERTLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKETYSI 203 (486)
Q Consensus 155 ~~~~erDl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~erm~~~ 203 (486)
+++||||+++|+.++. +++++..+..++..+..++++|+||+++|++.
T Consensus 330 ~~~~erdl~~s~~~r~-l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~ 377 (465)
T 2qga_B 330 TSRLQRDLSDSTVLRN-IGSSLAYCLIAYKSVLKGLNKIDIDRRNLEEE 377 (465)
T ss_dssp CCSTTBCTHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHEEECHHHHHHH
T ss_pred chhhhhhhhhhhhhhh-HHHHHHHHHHHHHHHHHHHccCEECHHHHHHH
Confidence 7899999999987666 78999999999999999999999999999984
No 31
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A
Probab=99.97 E-value=2.3e-30 Score=275.02 Aligned_cols=190 Identities=14% Similarity=0.063 Sum_probs=148.8
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCCCCccc-ccccccHHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSSHIITG-QTYSRKVDV 80 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~~~~~~-av~~RD~~~ 80 (486)
+|+++|.||.+|++++. ..++..|-.|.++-+...|+ .+|+ ..+.+.+++.|||. .++++ ++++||+++
T Consensus 186 ~~~~~l~r~~~rL~~~~-~~~~~~GAvGT~~~~~~~~~-~~~~------~~v~~~~~~~LGl~--~n~~~~~~~~rD~~~ 255 (462)
T 2ptr_A 186 NVAYRMERQYRQLNQVE-ILGKINGAVGNYNAHIAAYP-EVDW------HQFSEEFVTSLGIQ--WNPYTTQIEPHDYIA 255 (462)
T ss_dssp HHHHHHHHHHHHHHHCC-CEECCCCTTSSCHHHHHHCT-TSCH------HHHHHHHHHHTTCE--ECCCCSSSCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHhccCchhcchhhcccccC-cccH------HHHHHHHHHHhCCC--CCchhhhhcCCHHHH
Confidence 69999999999998876 22111111011111111343 1111 11234777889994 45677 799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhcc-cccc
Q psy14319 81 IVTGVLSSLGASIHKLATDLRLLAHMKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATAST-QWME 159 (486)
Q Consensus 81 e~~~~la~la~~LsRlA~DL~l~ss~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~-~~~e 159 (486)
|++++++.++++|+|||+||++|++-.++.|+++++++|||||||||||+.+|+++++|+++.|+...++. +++ ++||
T Consensus 256 e~~~~l~~~a~~L~kia~Dl~ll~s~~~~~E~~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~-~~~~~~~e 334 (462)
T 2ptr_A 256 ELFDCVARFNTILIDFDRDVWGYIALNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLAS-KLPVSRWQ 334 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSEEECCCTTCCSCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHH-HTTCCSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcchhccCCCCCCcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-hhhhhccc
Confidence 99999999999999999999999972225556778899999999999999999999999999999886544 555 7999
Q ss_pred CCCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHhhhhh
Q psy14319 160 RTLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKETYSI 203 (486)
Q Consensus 160 rDl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~erm~~~ 203 (486)
||+++|+.++. +++++..+..++..+..++++|+||++||++.
T Consensus 335 rd~~~~~~~~~-l~~~~~~~~~~l~~~~~~l~gl~vn~e~m~~~ 377 (462)
T 2ptr_A 335 RDLTDSTVLRN-LGVGIGYALIAYQSTLKGVSKLEVNRDHLLDE 377 (462)
T ss_dssp CCTHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHEEECHHHHHHH
T ss_pred ccccccHHHHH-HHHHHHHHHHHHHHHHHHHCcCEECHHHHHHH
Confidence 99999998776 78999999999999999999999999999984
No 32
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A
Probab=99.96 E-value=1.2e-29 Score=270.28 Aligned_cols=191 Identities=18% Similarity=0.166 Sum_probs=144.3
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCC-C-CC-CCcccccccccH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGF-N-SS-HIITGQTYSRKV 78 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf-~-~~-~~~~~av~~RD~ 78 (486)
+|+++|.||.+|++++.++++.. ++|| +|+ |+.++ +|+.. -....++++++||| . .+ .|+.+++++||+
T Consensus 224 ~~a~~l~rd~~RL~~~~~~l~~~-~LGg-tAv-GT~~~--~~~~~---~~~v~~~la~~lG~~~~~~~~n~~~a~~~rD~ 295 (495)
T 4adm_A 224 GYARQIEAGIERVRACLPRLGEL-AIGG-TAV-GTGLN--APDDF---GVRVVAVLVAQTGLSELRTAANSFEAQAARDG 295 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTEE-CTTC-TTT-SSCTT--SCTTH---HHHHHHHHHHHHCCTTCEECSCTTHHHHCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-CCCC-eee-cCCcc--CChhH---HHHHHHHHHHHhCCCCCccccchHHHHhccHH
Confidence 79999999999999999999853 4433 455 77663 43210 01123479999999 3 33 356799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhh
Q psy14319 79 DVIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATA 153 (486)
Q Consensus 79 ~~e~~~~la~la~~LsRlA~DL~l~ss-----~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~ 153 (486)
++|++++++.++++|+|||+||++|++ |+||.+|. .++|||||||||||+.+|.++++|+++.|+..++.+.+
T Consensus 296 ~~e~~~~L~~la~~L~Kia~DlrllsSgpr~e~gei~lp~--~q~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~ 373 (495)
T 4adm_A 296 LVEASGALRTIAVSLTKIANDIRWMGSGPLTGLAEIQLPD--LQPGSSIMPGKVNPVLPEAVTQVAAQVIGNDAAIAWGG 373 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCBSTTSCCCEECCC--C---------CCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceEECCC--CCCCCCCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 999999999999999999999999985 99999873 68999999999999999999999999999998876665
Q ss_pred ccccccCCCchhhHhhhchHHHHHHHHHHHHHH-HHhhhccccCHHhhhhh
Q psy14319 154 STQWMERTLDDSANRRLTLSESFLTTDCLLITL-QNVLEGLVVYPKETYSI 203 (486)
Q Consensus 154 ~~~~~erDl~~~~~~~~~l~~a~~~~~~~l~~~-~~vl~~l~vn~erm~~~ 203 (486)
..++++.+...+... ..+++++.++..++..+ ..|+++|+||++||++.
T Consensus 374 ~~g~~eln~~~p~i~-~~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~ 423 (495)
T 4adm_A 374 ANGAFELNVYIPMMA-RNILESFKLLTNVSRLFAQRCIAGLTANVEHLRRL 423 (495)
T ss_dssp HTCBTTBCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHH
T ss_pred HcChHHhhhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHH
Confidence 556677665444322 23567777777777776 89999999999999984
No 33
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A
Probab=99.96 E-value=1.9e-29 Score=267.99 Aligned_cols=206 Identities=15% Similarity=0.069 Sum_probs=160.9
Q ss_pred cCCCCCCcccccccccCCCCCCCcHHHHHHHHHHHcCCCCCccccc-cccCccHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy14319 205 IIPDNRLSSHHTTKRSGRPGDGDKVKALDRLVTKKAGFTSSHIITG-QTYSRKVDVIVTGVLSSLGASIHKLATDLRLLA 283 (486)
Q Consensus 205 ~~~~~~g~~~~~~~~~~~~~~g~~~~~i~~~lA~~LGf~~a~~~~~-~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~s 283 (486)
.+.|++||..+. ...|. +.+.+.+.+.+++.|||.. |..+ ++++||+++|++++++.++++|+|||+||++|+
T Consensus 206 ~~~GAvGT~~~~--~~~~~--~~~~~~v~~~~~~~LGl~~--n~~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~ 279 (462)
T 2ptr_A 206 KINGAVGNYNAH--IAAYP--EVDWHQFSEEFVTSLGIQW--NPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVWGYI 279 (462)
T ss_dssp CCCCTTSSCHHH--HHHCT--TSCHHHHHHHHHHHTTCEE--CCCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCchhcchhhc--ccccC--cccHHHHHHHHHHHhCCCC--CchhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 366777774310 01111 1234668888888899953 4555 799999999999999999999999999999999
Q ss_pred hhhhccccccCCCCcCcCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhcc
Q psy14319 284 HMKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQH 363 (486)
Q Consensus 284 s~~el~~~~~~~~~GSSiMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (486)
|-.++.|+++++++|||||||||||+.+|.++++|++++|+...++......++|||+.+|.
T Consensus 280 s~~~~~E~~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~erd~~~~~------------------ 341 (462)
T 2ptr_A 280 ALNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQRDLTDST------------------ 341 (462)
T ss_dssp HTTSEEECCCTTCCSCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTCCTHHHH------------------
T ss_pred CCcchhccCCCCCCcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccH------------------
Confidence 83336678899999999999999999999999999999999988877654467777664321
Q ss_pred CCcchhhhhhccCCCCccccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHHH
Q psy14319 364 GKENDLVDRIRADPYFAPILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQR 443 (486)
Q Consensus 364 g~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~ 443 (486)
..| .+.+++..+..++..+..++++|+||++||++
T Consensus 342 --------------------------------------------~~~-~l~~~~~~~~~~l~~~~~~l~gl~vn~e~m~~ 376 (462)
T 2ptr_A 342 --------------------------------------------VLR-NLGVGIGYALIAYQSTLKGVSKLEVNRDHLLD 376 (462)
T ss_dssp --------------------------------------------HGG-GHHHHHHHHHHHHHHHHHHHHHEEECHHHHHH
T ss_pred --------------------------------------------HHH-HHHHHHHHHHHHHHHHHHHHCcCEECHHHHHH
Confidence 012 36788888888888888999999999999999
Q ss_pred HHhccCChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHh
Q psy14319 444 HIDQELPFMATENIIMAMVKAGGDRQVCHEKIRVLSHQA 482 (486)
Q Consensus 444 ~l~~~~~~~~a~~~~~~L~~~g~~fr~Ah~~v~~~~~~a 482 (486)
+++.+.+ ++||.+.+.|++.|.+ +||++|+++++.+
T Consensus 377 ~l~~~~~-~~te~~~~~l~~~G~~--~A~~iv~~~~~~~ 412 (462)
T 2ptr_A 377 ELDHNWE-VLAEPIQTVMRRYGIE--KPYEKLKELTRGK 412 (462)
T ss_dssp HHTTCGG-GGHHHHHHHHHHTTCS--SHHHHHHHC----
T ss_pred HHHcCCc-hHHHHHHHHHHhhChH--HHHHHHHHHHHHH
Confidence 9999887 4577777777776664 9999999999854
No 34
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A
Probab=99.96 E-value=1.5e-29 Score=268.51 Aligned_cols=191 Identities=16% Similarity=0.209 Sum_probs=145.2
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCCCC--CCcccccccccHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFNSS--HIITGQTYSRKVD 79 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~--~~~~~av~~RD~~ 79 (486)
+|+++|.||.+|++++.+++.. +++|| +|+ |+.++ +|+. .-....++++++|||..+ .+..+++++||++
T Consensus 223 ~~a~~l~rd~~RL~~~~~~l~~-~~lGg-tAv-GTg~~--~~~~---~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~ 294 (478)
T 3ocf_A 223 AFAATLREDTARLEEVAALFRE-VNLGG-TAI-GTRIN--ASHA---YAEQAIVELSQISGIELKATGNLVEASWDTGAF 294 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGE-ECTTC---------------C---HHHHHHHHHHHHHTSCCEECSCHHHHTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhH-hCCCC-eee-CCCcC--CChh---HHHHHHHHHHHhcCCCCccCCChhhhhcccHHH
Confidence 6999999999999999999985 34434 455 77663 4421 111223588999999853 4567999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14319 80 VIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATAS 154 (486)
Q Consensus 80 ~e~~~~la~la~~LsRlA~DL~l~ss-----~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~ 154 (486)
+|++++++.++++|+|||+||++|+| |+||.+| +.++|||||||||||+.+|.++++|++|.|+..++.+.+.
T Consensus 295 ~e~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp--~~q~GSSiMP~K~NPv~~E~i~~~a~~V~G~~~~i~~a~~ 372 (478)
T 3ocf_A 295 VTFSGILRRIAVKLSKIANDLRLLSSGPRSGLGEIRLP--AVQPGSSIMPGKVNPVIPESVNQVCYQVIGNDLTVTMAAE 372 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCBSSSSCCCEECC--CCSCCBTTBTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeEEECC--CCCCcCCCCCcccCcHHHHHHHHHHHHHHhHHHHHHHHHh
Confidence 99999999999999999999999994 9999987 4789999999999999999999999999999988766665
Q ss_pred cccccCCCchhhHhhhchHHHHHHHHHHHHH-HHHhhhccccCHHhhhhh
Q psy14319 155 TQWMERTLDDSANRRLTLSESFLTTDCLLIT-LQNVLEGLVVYPKETYSI 203 (486)
Q Consensus 155 ~~~~erDl~~~~~~~~~l~~a~~~~~~~l~~-~~~vl~~l~vn~erm~~~ 203 (486)
.++++.+...+...+ .+++.+.++..++.. ...|+++|+||++||++.
T Consensus 373 ~g~leln~~~p~i~~-~l~~s~~ll~~~~~~~~~~~v~gl~vn~erm~~~ 421 (478)
T 3ocf_A 373 SGQLQLNAFEPLIVY-NILSSMRLLGRAMTNLAERCVDGIEANVERCRAG 421 (478)
T ss_dssp TCBTTBCTTHHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHH
T ss_pred cCcchhcccchhHHH-HHHHHHHHHHHHHHHHHHHhhCCCEECHHHHHHH
Confidence 666666554443322 355666665555554 466899999999999984
No 35
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A
Probab=99.96 E-value=1.2e-29 Score=269.73 Aligned_cols=183 Identities=16% Similarity=0.144 Sum_probs=149.7
Q ss_pred HHHHHHH-HHcCCCCCccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCcCcCCCCCCCch
Q psy14319 231 ALDRLVT-KKAGFTSSHIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAHMKEIEEPFESTQIGSSAMAYKRNPM 309 (486)
Q Consensus 231 ~i~~~lA-~~LGf~~a~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss~~el~~~~~~~~~GSSiMPqKrNP~ 309 (486)
.+.+.++ +.|||..+ ...+++++||+++|++++++.++++|+|||+||++|++.+++.++++++++|||||||||||+
T Consensus 227 ~~~~~~~~~~LGl~~~-~~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~~~~~e~~~~~~~GSSiMP~K~NP~ 305 (465)
T 2qga_B 227 NTIGLFLKKHFNLTYS-IYCTQIQDHDYICELCDGLARANGTLIDLCVDIWLYISNNLLKLKVKEKEVGSSTMPHKVNPI 305 (465)
T ss_dssp HHHHHHHHHHHCCEEC-CCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEC-------CCSCTTCCCCH
T ss_pred HHHHHHHHHHhCCCCC-CCccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceeeeCCCCCCCCCCCCCCCChH
Confidence 4555554 55999865 356889999999999999999999999999999999996667888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccCCcchhhhhhccCCCCccccccCCCC
Q psy14319 310 RSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHGKENDLVDRIRADPYFAPILNQMPTL 389 (486)
Q Consensus 310 ~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~~ 389 (486)
.+|.++++++.+.+....++......++|||+.+|..
T Consensus 306 ~~e~~~g~~~~~~~~~~~~~~~l~~~~~erdl~~s~~------------------------------------------- 342 (465)
T 2qga_B 306 DFENAEGNLHIANAFFKLFSSKLPTSRLQRDLSDSTV------------------------------------------- 342 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCSTTBCTHHHHH-------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhh-------------------------------------------
Confidence 9999999999999998887776555677777654311
Q ss_pred CCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHHHHHhccCChhHHHHHHHHHHHcCCChH
Q psy14319 390 LDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQ 469 (486)
Q Consensus 390 ~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~~~~~a~~~~~~L~~~g~~fr 469 (486)
.| .++.++..+..++..+..++++|+||+++|+++++.++++ +||.++++|+++| ++
T Consensus 343 -------------------~r-~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~-~ae~v~~~L~~~G--~~ 399 (465)
T 2qga_B 343 -------------------LR-NIGSSLAYCLIAYKSVLKGLNKIDIDRRNLEEELNQNWST-LAEPIQIVMKRHN--YV 399 (465)
T ss_dssp -------------------HT-THHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHTCGGG-GHHHHHHHHHHTT--CS
T ss_pred -------------------hh-hHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHcCCCh-HHHHHHHHHHHhC--hH
Confidence 12 3677888888888888899999999999999999999884 4899999999985 49
Q ss_pred HHHHHHHHHHH
Q psy14319 470 VCHEKIRVLSH 480 (486)
Q Consensus 470 ~Ah~~v~~~~~ 480 (486)
+||++|+++++
T Consensus 400 ~A~~iv~~~~~ 410 (465)
T 2qga_B 400 DAYEELKQFTR 410 (465)
T ss_dssp CHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999999987
No 36
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A
Probab=99.96 E-value=4.2e-29 Score=265.00 Aligned_cols=185 Identities=20% Similarity=0.232 Sum_probs=146.7
Q ss_pred CCCCcHHHHHHHHHHHcCCCCC--ccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhhccccccCCC
Q psy14319 224 GDGDKVKALDRLVTKKAGFTSS--HIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQ 296 (486)
Q Consensus 224 ~~g~~~~~i~~~lA~~LGf~~a--~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss-----~~el~~~~~~~~ 296 (486)
.+...+..+.+.+++.|||..+ .|.++++++||+++|++++|+.++++|+|||+||++|+| ||||.+| ..+
T Consensus 238 ~~~~~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~Kia~DlrllsS~pr~g~gei~lp--~~~ 315 (468)
T 3r6q_A 238 ADPEYISIVTEHLAKFSGHPLRSAQHLVDATQNTDCYTEVSSALKVCMINMSKIANDLRLMASGPRAGLSEIVLP--ARQ 315 (468)
T ss_dssp CCHHHHHHHHHHHHHHHCSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSCCCEECC--CCS
T ss_pred CChHHHHHHHHHHHHHhCCCCccccchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeEEECC--CCC
Confidence 3444467788889999999853 367789999999999999999999999999999999996 8999987 468
Q ss_pred CcCcCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccCCcchhhhhhccC
Q psy14319 297 IGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHGKENDLVDRIRAD 376 (486)
Q Consensus 297 ~GSSiMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~~ 376 (486)
+|||||||||||+.+|.++++|++++|++.+++.++..+++|++
T Consensus 316 ~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln------------------------------------ 359 (468)
T 3r6q_A 316 PGSSIMPGKVNPVMPEVMNQVAFQVFGNDLTITSASEAGQFELN------------------------------------ 359 (468)
T ss_dssp CCCTTSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBC------------------------------------
T ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHcCchhhh------------------------------------
Confidence 99999999999999999999999999999998876543333321
Q ss_pred CCCccccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHH-hchhCCeeCHHHHHHHHhccCChhHHH
Q psy14319 377 PYFAPILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQ-NVLEGLVVYPKVIQRHIDQELPFMATE 455 (486)
Q Consensus 377 ~~~~~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~-~~l~~l~v~~~~m~~~l~~~~~~~~a~ 455 (486)
++.|. .|..+++++.++..++..+. .|++||+||++||+++++.+.++ ++
T Consensus 360 ------------~~~p~---------------i~~~l~~s~~~l~~~l~~~~~~~i~gl~vn~erm~~~l~~s~~l--~t 410 (468)
T 3r6q_A 360 ------------VMEPV---------------LFFNLIQSISIMTNVFKSFTENCLKGIKANEERMKEYVEKSIGI--IT 410 (468)
T ss_dssp ------------TTHHH---------------HHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHTCSTT--HH
T ss_pred ------------hhHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHcCCch--HH
Confidence 11121 13467889999999999998 99999999999999999988664 44
Q ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHhhh
Q psy14319 456 NIIMAMVKAGGDRQVCHEKIRVLSHQAGA 484 (486)
Q Consensus 456 ~~~~~L~~~g~~fr~Ah~~v~~~~~~a~~ 484 (486)
+|+.. + +|+++++++++|.+
T Consensus 411 ~La~~-----l----gy~~a~~ia~~a~~ 430 (468)
T 3r6q_A 411 AINPH-----V----GYETAAKLAREAYL 430 (468)
T ss_dssp HHHHH-----H----HHHHHHHHHHHHHH
T ss_pred hcchh-----h----HHHHHHHHHHHHHH
Confidence 44443 3 44444455555543
No 37
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii}
Probab=99.96 E-value=3.2e-29 Score=265.63 Aligned_cols=185 Identities=20% Similarity=0.172 Sum_probs=151.8
Q ss_pred CCCcHHHHHHHHHHHcCCCCC--ccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhhccccccCCCC
Q psy14319 225 DGDKVKALDRLVTKKAGFTSS--HIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQI 297 (486)
Q Consensus 225 ~g~~~~~i~~~lA~~LGf~~a--~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss-----~~el~~~~~~~~~ 297 (486)
+...+..+.+++++.|||+.+ .|.++++++||+++|++++|+.++++|+|||+||++|+| ||||.+| +.++
T Consensus 260 ~~~~~~~v~~~la~~lGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp--~~~~ 337 (482)
T 3gtd_A 260 KIGFDIKFAQKVAEFTQQPFKTAPNKFESLAAHDALVEFSGTLNTIAVSLMKIANDIRLLGSGPRCGLGELHLP--ENEP 337 (482)
T ss_dssp CTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECC--CCSC
T ss_pred CchhHHHHHHHHHHHhCCCCccccchhhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCeeEEECC--CCCC
Confidence 344567889999999999852 367789999999999999999999999999999999996 8899976 5699
Q ss_pred cCcCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccCCcchhhhhhccCC
Q psy14319 298 GSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHGKENDLVDRIRADP 377 (486)
Q Consensus 298 GSSiMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~ 377 (486)
|||||||||||+.+|.++++|++++|+++++...+..+++|++.
T Consensus 338 GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~------------------------------------ 381 (482)
T 3gtd_A 338 GSSIMPGKVNPTQVEALTMVCTQVMGNHVTVTIAGSNGHLELNV------------------------------------ 381 (482)
T ss_dssp CCSSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTCCBTTBCC------------------------------------
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcc------------------------------------
Confidence 99999999999999999999999999999988776555555432
Q ss_pred CCccccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHHHHHhccCChhHHHHH
Q psy14319 378 YFAPILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENI 457 (486)
Q Consensus 378 ~~~~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~~~~~a~~~ 457 (486)
| +|.. .|..+++++.+++++..+...|++||+||++||+++++.+. ++++.+
T Consensus 382 -~-----------~pl~--------------~~~~l~s~~ll~~~~~~~~~~~v~gl~vn~erm~~~l~~s~--~lvTaL 433 (482)
T 3gtd_A 382 -F-----------KPVI--------------IYNILQSIELLSDSVNSFVTHCVKGLEPNIARINTLRDKSL--MLVTVL 433 (482)
T ss_dssp -C-----------HHHH--------------HHHHHHHHHHHHHHHHHHHHHTTTTCEECHHHHHHHHHHCG--GGHHHH
T ss_pred -c-----------chHH--------------HHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhhhh--HHHHHh
Confidence 1 2221 25689999999999999999999999999999999998764 455544
Q ss_pred HHHHHHcCCChHHHHHHHHHHHH
Q psy14319 458 IMAMVKAGGDRQVCHEKIRVLSH 480 (486)
Q Consensus 458 ~~~L~~~g~~fr~Ah~~v~~~~~ 480 (486)
.+. ++++.|+++++++..
T Consensus 434 ----a~~-iGy~~a~~ia~~A~~ 451 (482)
T 3gtd_A 434 ----NPH-IGYDNAAKIAKEAHK 451 (482)
T ss_dssp ----HHH-HCHHHHHHHHHHHHH
T ss_pred ----hhH-HHHHHHHHHHHHHHH
Confidence 444 456777776665543
No 38
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp}
Probab=99.96 E-value=1.7e-29 Score=268.09 Aligned_cols=185 Identities=15% Similarity=0.126 Sum_probs=146.4
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccC------cccccchhhhhhhhhhhhHHHHHHcCCCCCCCccc-ccc
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQ------TYSRKVDVIVTGVLSSLGASIHKKAGFNSSHIITG-QTY 74 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~------~~~r~~d~~~~Gt~a~~~~~~a~~LGf~~~~~~~~-av~ 74 (486)
+|+++|.||.+|++++. . +|. +++|+ |+ +|| .+|+ ..+.+++++.|||..+ +++ +++
T Consensus 189 ~~~~~l~r~~~rL~~~~-~----~~~-~~GAv-GT~~a~~~~~~-~~~~------~~~~~~~~~~LGl~~~--~~~~~~~ 252 (459)
T 3bhg_A 189 NFVARLKRPQQQLAEVL-I----PAK-FNGAV-GNYNAHVAAYP-EVDW------RKHCANFVTSLGLSFN--AYTTQIE 252 (459)
T ss_dssp HHHHHHHHHHHHHHHCC-C----EEC-CCCSS-SSCHHHHHHCT-TSCH------HHHHHHHHHHTTCEEC--SSCSSSC
T ss_pred HHHHHHHHHHHHHHHHH-H----hhc-ccccc-ccccccccccC-cccH------HHHHHHHHHHhCCCCC--ccccchh
Confidence 69999999999999877 2 232 24566 66 333 1222 1245678888999743 344 899
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14319 75 SRKVDVIVTGVLSSLGASIHKLATDLRLLAHMKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATAS 154 (486)
Q Consensus 75 ~RD~~~e~~~~la~la~~LsRlA~DL~l~ss~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~ 154 (486)
+||+++|++++++.++++|+|||+||++|++-+++.++++++++|||||||||||+.+|+++++++.+.+....++....
T Consensus 253 ~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~~~~~e~~~~~~~GSSiMP~K~NP~~~e~~~g~~~l~~~~~~~~~~~l~ 332 (459)
T 3bhg_A 253 PHDGIAEVSQIMVRINNILLDYTQDIWSYISLGYFKQKTIAEEVGSSTMPHKVNPIDFENAEGNLGLSNALFIHFANKLT 332 (459)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEECC------CCSSCCCCCTHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceehccCCCCCCCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999974445667778899999999999999999999999999998775444333
Q ss_pred cccccCCCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHhhhhh
Q psy14319 155 TQWMERTLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKETYSI 203 (486)
Q Consensus 155 ~~~~erDl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~erm~~~ 203 (486)
+++||||+++|+.+|. +++++..+..++..+..++++|+||+++|++.
T Consensus 333 ~~~~~rdl~~s~~~r~-l~~~~~~~~~~l~~~~~~l~gl~vn~e~m~~~ 380 (459)
T 3bhg_A 333 QSRMQRDLSDSTVLRN-LGVAFSYSLIAYHSVAKGNDKLQINKSALQKD 380 (459)
T ss_dssp CCSTTCCTHHHHHHTT-HHHHHHHHHHHHHHHHHHHTTEEECHHHHHHH
T ss_pred HHHhcccchhhhhhhh-HHHHHHHHHHHHHHHHHHHCcCEECHHHHHHH
Confidence 6899999999987766 89999999999999999999999999999984
No 39
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti}
Probab=99.96 E-value=3.9e-29 Score=266.71 Aligned_cols=191 Identities=17% Similarity=0.156 Sum_probs=155.7
Q ss_pred hhhhhHhccHHHHHHHHHHHhhhcCCCceeecccCcccccchhhhhhhhhhhhHHHHHHcCCC--CCCCcccccccccHH
Q psy14319 2 KFYKYVLGDGDKVKALDRLVTKKAGFNSSHIITGQTYSRKVDVIVTGVLSSLGASIHKKAGFN--SSHIITGQTYSRKVD 79 (486)
Q Consensus 2 ~~~~~~~~d~~r~~~~~~~~~~~~g~~~~~a~~g~~~~r~~d~~~~Gt~a~~~~~~a~~LGf~--~~~~~~~av~~RD~~ 79 (486)
+|++.|.||.+|++++.+++.. ++++|...-+|...+...+. ...+++++.+||. ...+..+++++||++
T Consensus 235 ~~~~~l~r~~~RL~~~~~~~~~-~~lGgtAvGtg~~~~~~~~~-------~v~~~la~~~gl~f~~a~n~~~~~~~rD~~ 306 (495)
T 4hgv_A 235 GYAAQVASSIKRIEMTLPGLCE-LAQGGTAVGTGLNAPVGFAE-------KVAEEIAAITGIGFTSAPNKFEALAAHDSM 306 (495)
T ss_dssp HHHHHHHHHHHHHHHTHHHHTE-ECTTCTTTSSCTTSCTTHHH-------HHHHHHHHHHTSCCEECSCHHHHHHCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-hcCCcchhhhcccCchhHHH-------HHHHHHHHHhCCCccccCCHHHHHhhhHHH
Confidence 6999999999999999998874 34434333366666522221 1124677776665 445677899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccccccccCCCCCccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14319 80 VIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATAS 154 (486)
Q Consensus 80 ~e~~~~la~la~~LsRlA~DL~l~ss-----~~el~e~~~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~ 154 (486)
++++++++.++++|+|||+||++|++ |+|+.. +++++|||||||||||+.+|.++++|+++.|+...+.+.+.
T Consensus 307 ~e~~~~L~~la~~L~Kia~Dirll~S~~~~g~~Ei~~--p~~q~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~ 384 (495)
T 4hgv_A 307 VFSHGAINATAAALFKIANDIRFLGSGPRSGLGELSL--PENEPGSSIMPGKVNPTQCEALTQVCVQVFGNHAALTFAGS 384 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEEC--CCCSCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEEec--CcCCcccccCccccChHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999985 555554 56899999999999999999999999999999988777778
Q ss_pred cccccCCCchhhHhhhchHHHHHHHHHHHHHHHHhhhccccCHHhhhh
Q psy14319 155 TQWMERTLDDSANRRLTLSESFLTTDCLLITLQNVLEGLVVYPKETYS 202 (486)
Q Consensus 155 ~~~~erDl~~~~~~~~~l~~a~~~~~~~l~~~~~vl~~l~vn~erm~~ 202 (486)
.+++|+|...|..+|..++++..+++.++.++..|+++|+||++||++
T Consensus 385 ~~~~e~n~~~~~~~~~ll~s~~~l~~~~~~~~~~~i~gl~vn~erm~~ 432 (495)
T 4hgv_A 385 QGHFELNVYNPLMAYNFLQSVQLLADAAISFTDNCVVGIEAREDNIKA 432 (495)
T ss_dssp TCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHH
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCEECHHHHHH
Confidence 889999999999999999999999999999999999999999999998
No 40
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp}
Probab=99.96 E-value=9.2e-29 Score=262.56 Aligned_cols=185 Identities=15% Similarity=0.136 Sum_probs=150.4
Q ss_pred HHHHHHHHHHHcCCCCCccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCcCcCCCCCCCc
Q psy14319 229 VKALDRLVTKKAGFTSSHIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAHMKEIEEPFESTQIGSSAMAYKRNP 308 (486)
Q Consensus 229 ~~~i~~~lA~~LGf~~a~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss~~el~~~~~~~~~GSSiMPqKrNP 308 (486)
.+.+.+.+++.|||... ...+++++||+++|++++++.++++|+|||+||++|++.+++.++++++++|||||||||||
T Consensus 229 ~~~~~~~~~~~LGl~~~-~~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~~~~~e~~~~~~~GSSiMP~K~NP 307 (459)
T 3bhg_A 229 WRKHCANFVTSLGLSFN-AYTTQIEPHDGIAEVSQIMVRINNILLDYTQDIWSYISLGYFKQKTIAEEVGSSTMPHKVNP 307 (459)
T ss_dssp HHHHHHHHHHHTTCEEC-SSCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEECC------CCSSCCCCCT
T ss_pred HHHHHHHHHHHhCCCCC-ccccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceehccCCCCCCCCCCCCCcCh
Confidence 46688888888999753 34458999999999999999999999999999999999555778899999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccCCcchhhhhhccCCCCccccccCCC
Q psy14319 309 MRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHGKENDLVDRIRADPYFAPILNQMPT 388 (486)
Q Consensus 309 ~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~ 388 (486)
+.+|.++++++.+.+....++......+++||+.+|.
T Consensus 308 ~~~e~~~g~~~l~~~~~~~~~~~l~~~~~~rdl~~s~------------------------------------------- 344 (459)
T 3bhg_A 308 IDFENAEGNLGLSNALFIHFANKLTQSRMQRDLSDST------------------------------------------- 344 (459)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCSTTCCTHHHH-------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhh-------------------------------------------
Confidence 9999999999999998887766544456777664321
Q ss_pred CCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHHHHHhccCChhHHHHHHHHHHHcCCCh
Q psy14319 389 LLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDR 468 (486)
Q Consensus 389 ~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~~~~~a~~~~~~L~~~g~~f 468 (486)
..| .++.++..+..++..+..++++|+||+++|+++++.+++ ++||.+.+.|+++|.
T Consensus 345 -------------------~~r-~l~~~~~~~~~~l~~~~~~l~gl~vn~e~m~~~l~~~~~-~~te~~~~~L~~~G~-- 401 (459)
T 3bhg_A 345 -------------------VLR-NLGVAFSYSLIAYHSVAKGNDKLQINKSALQKDLSENWE-VLAEAIQTVMRRYNE-- 401 (459)
T ss_dssp -------------------HHT-THHHHHHHHHHHHHHHHHHHTTEEECHHHHHHHHHTCGG-GGHHHHHHHHHHTTC--
T ss_pred -------------------hhh-hHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHHcCCc-hHHHHHHHHHHHhCh--
Confidence 112 367888888888888899999999999999999999988 457877788888866
Q ss_pred HHHHHHHHHHHH
Q psy14319 469 QVCHEKIRVLSH 480 (486)
Q Consensus 469 r~Ah~~v~~~~~ 480 (486)
.+||++|+++++
T Consensus 402 ~~A~~iv~~~~~ 413 (459)
T 3bhg_A 402 PNAYEQLKELTR 413 (459)
T ss_dssp TTHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 499999999998
No 41
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens}
Probab=99.96 E-value=6.1e-29 Score=263.71 Aligned_cols=183 Identities=19% Similarity=0.194 Sum_probs=142.8
Q ss_pred CCCcHHHHHHHHHHHcCCCC--CccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhhccccccCCCC
Q psy14319 225 DGDKVKALDRLVTKKAGFTS--SHIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQI 297 (486)
Q Consensus 225 ~g~~~~~i~~~lA~~LGf~~--a~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss-----~~el~~~~~~~~~ 297 (486)
+...+..+.+.+++.|||+. ..|.++++++||+++|++++|+.++++|+|||+||++|+| ||||.+| +.++
T Consensus 266 ~~~~~~~v~~~la~~lGl~~~~~~n~~da~~~rD~~ve~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp--~~~~ 343 (490)
T 3e04_A 266 RIGFAEKVAAKVAALTGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSGPRSGLGELILP--ENEP 343 (490)
T ss_dssp CTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECC--CCSC
T ss_pred ChhHHHHHHHHHHHHhCCCCcCCCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEECC--CCCC
Confidence 33446788999999999985 2367789999999999999999999999999999999996 8899876 4699
Q ss_pred cCcCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccCCcchhhhhhccCC
Q psy14319 298 GSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHGKENDLVDRIRADP 377 (486)
Q Consensus 298 GSSiMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~ 377 (486)
|||||||||||+.+|.++++|++++|+++++...+..+++|++
T Consensus 344 GSSiMP~K~NPv~~E~i~~~a~~v~G~~~ai~~a~~~g~~eln------------------------------------- 386 (490)
T 3e04_A 344 GSSIMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELN------------------------------------- 386 (490)
T ss_dssp C-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBC-------------------------------------
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-------------------------------------
Confidence 9999999999999999999999999999998776554444432
Q ss_pred CCccccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHHHHHhccCChhHHHHH
Q psy14319 378 YFAPILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENI 457 (486)
Q Consensus 378 ~~~~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~~~~~a~~~ 457 (486)
+| +|.. .|..++++..+.++++.+...|++||+||++||+++++.+.+ +++.+
T Consensus 387 ~~-----------~p~~--------------~~~ll~s~~ll~~~~~~~~~~~v~gl~vn~erm~~~l~~s~~--lvTaL 439 (490)
T 3e04_A 387 VF-----------KPMM--------------IKNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESLM--LVTAL 439 (490)
T ss_dssp CC-----------HHHH--------------HHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCSG--GGGGG
T ss_pred cc-----------chHH--------------HHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhhchH--HHHHh
Confidence 12 2222 245889999999999999999999999999999999987754 44444
Q ss_pred HHHHHHcCCChHHHHHHHHHH
Q psy14319 458 IMAMVKAGGDRQVCHEKIRVL 478 (486)
Q Consensus 458 ~~~L~~~g~~fr~Ah~~v~~~ 478 (486)
.+. ++++.|+++++++
T Consensus 440 ----a~~-iGy~~a~~iak~A 455 (490)
T 3e04_A 440 ----NPH-IGYDKAAKIAKTA 455 (490)
T ss_dssp ----HHH-HCHHHHHHHHHHH
T ss_pred ----hhH-HHHHHHHHHHHHH
Confidence 344 4455665555544
No 42
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1
Probab=99.96 E-value=2.1e-28 Score=260.84 Aligned_cols=179 Identities=19% Similarity=0.217 Sum_probs=145.8
Q ss_pred HHHHHHHHHHHcCCCC-Cc-cccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhhccccccCCCCcCcC
Q psy14319 229 VKALDRLVTKKAGFTS-SH-IITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQIGSSA 301 (486)
Q Consensus 229 ~~~i~~~lA~~LGf~~-a~-~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss-----~~el~~~~~~~~~GSSi 301 (486)
...+.+.+++.|||.. +. |.++++++||+++|++++|+.++++|+|||+||++|+| ||||.+|+ +++||||
T Consensus 246 ~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gei~lp~--~~~GSSi 323 (478)
T 1jsw_A 246 SPLAVKKLAEVTGFPCVPAEDLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPE--LQAGSSI 323 (478)
T ss_dssp HHHHHHHHHHHHCCCCEECSCSSSBTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTTSCCCEECCC--CSCCCSS
T ss_pred HHHHHHHHHHHcCCCCCcCCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCceeEECCC--CCCCCCC
Confidence 5788899999999984 33 67789999999999999999999999999999999995 89999985 7899999
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccCCcchhhhhhccCCCCcc
Q psy14319 302 MAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHGKENDLVDRIRADPYFAP 381 (486)
Q Consensus 302 MPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~ 381 (486)
|||||||+.+|.++++|++++|++.+++..+..+++|+++.
T Consensus 324 MP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~--------------------------------------- 364 (478)
T 1jsw_A 324 MPAKVNPVVPEVVNQVCFKVIGNDTTVTMAAEAGQLQLNVM--------------------------------------- 364 (478)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCTT---------------------------------------
T ss_pred CCcccCCHHHHHHHHHHHHHHhHHHHHHHHHhccchhhccc---------------------------------------
Confidence 99999999999999999999999999987766556665431
Q ss_pred ccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHH-hchhCCeeCHHHHHHHHhccCChhHHHHHHHH
Q psy14319 382 ILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQ-NVLEGLVVYPKVIQRHIDQELPFMATENIIMA 460 (486)
Q Consensus 382 ~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~-~~l~~l~v~~~~m~~~l~~~~~~~~a~~~~~~ 460 (486)
+|.. |..+.+++.++..++..+. .|+++|+||++||+++++.+.+++ ++++..
T Consensus 365 ---------~p~~---------------~~~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~~~~l~--t~La~~ 418 (478)
T 1jsw_A 365 ---------EPVI---------------GQAMFESVHILTNACYNLLEKCINGITANKEVCEGYVYNSIGIV--TYLNPF 418 (478)
T ss_dssp ---------HHHH---------------HHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHTTCTTCG--GGTHHH
T ss_pred ---------chHH---------------HHHHHHHHHHHHHHHHHHHHHHHccCeecHHHHHHHHHhCchHH--HHHHHh
Confidence 1221 2357788888888888887 699999999999999999887644 445443
Q ss_pred HHHcCCChHHHHHHHHHHHHHhh
Q psy14319 461 MVKAGGDRQVCHEKIRVLSHQAG 483 (486)
Q Consensus 461 L~~~g~~fr~Ah~~v~~~~~~a~ 483 (486)
++ |++++++++.|.
T Consensus 419 -----lg----~~~a~~~v~~a~ 432 (478)
T 1jsw_A 419 -----IG----HHNGDIVGKICA 432 (478)
T ss_dssp -----HC----HHHHHHHHHHHH
T ss_pred -----hh----HHHHHHHHHHHH
Confidence 33 444455555543
No 43
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A
Probab=99.96 E-value=1e-28 Score=263.07 Aligned_cols=185 Identities=18% Similarity=0.181 Sum_probs=136.0
Q ss_pred CCCcHHHHHHHHHHHcCC-CC-C-ccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhhccccccCCC
Q psy14319 225 DGDKVKALDRLVTKKAGF-TS-S-HIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQ 296 (486)
Q Consensus 225 ~g~~~~~i~~~lA~~LGf-~~-a-~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss-----~~el~~~~~~~~ 296 (486)
+......+.+.+++.||| .. + .|.++++++||+++|++++|+.++++|+|||+||++|+| ||||.+| ..+
T Consensus 260 ~~~~~~~v~~~la~~lG~~~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsSgpr~e~gei~lp--~~q 337 (495)
T 4adm_A 260 PDDFGVRVVAVLVAQTGLSELRTAANSFEAQAARDGLVEASGALRTIAVSLTKIANDIRWMGSGPLTGLAEIQLP--DLQ 337 (495)
T ss_dssp CTTHHHHHHHHHHHHHCCTTCEECSCTTHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCBSTTSCCCEECC--CC-
T ss_pred ChhHHHHHHHHHHHHhCCCCCccccchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceEECC--CCC
Confidence 344567888999999999 43 2 367789999999999999999999999999999999996 9999976 479
Q ss_pred CcCcCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccCCcchhhhhhccC
Q psy14319 297 IGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHGKENDLVDRIRAD 376 (486)
Q Consensus 297 ~GSSiMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~~ 376 (486)
+|||||||||||+.+|.++++|++++|+.++++.++..+++|.
T Consensus 338 ~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~el------------------------------------- 380 (495)
T 4adm_A 338 PGSSIMPGKVNPVLPEAVTQVAAQVIGNDAAIAWGGANGAFEL------------------------------------- 380 (495)
T ss_dssp --------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTB-------------------------------------
T ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHcChHHh-------------------------------------
Confidence 9999999999999999999999999999999887754333322
Q ss_pred CCCccccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHH-HhchhCCeeCHHHHHHHHhccCChhHHH
Q psy14319 377 PYFAPILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITL-QNVLEGLVVYPKVIQRHIDQELPFMATE 455 (486)
Q Consensus 377 ~~~~~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~-~~~l~~l~v~~~~m~~~l~~~~~~~~a~ 455 (486)
+++.|... | .+.+.+.++..++..+ ..|++||+||++||+++++.+.+++ +
T Consensus 381 -----------n~~~p~i~--------------~-~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~s~~l~--t 432 (495)
T 4adm_A 381 -----------NVYIPMMA--------------R-NILESFKLLTNVSRLFAQRCIAGLTANVEHLRRLAESSPSIV--T 432 (495)
T ss_dssp -----------CCCHHHHH--------------H-HHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCGGGG--G
T ss_pred -----------hhhHHHHH--------------H-HHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhccccHH--H
Confidence 11222211 2 2445555555555555 8999999999999999999886643 3
Q ss_pred HHHHHHHHcCCChHHHHHHHHHHHHH
Q psy14319 456 NIIMAMVKAGGDRQVCHEKIRVLSHQ 481 (486)
Q Consensus 456 ~~~~~L~~~g~~fr~Ah~~v~~~~~~ 481 (486)
+ |++. ++|+.||++++++..+
T Consensus 433 ~----La~~-igy~~a~~ia~~a~~~ 453 (495)
T 4adm_A 433 P----LNSA-IGYEEAAAVAKQALKE 453 (495)
T ss_dssp G----GHHH-HCHHHHHHHHHHHHHH
T ss_pred H----hhhh-hhHHHHHHHHHHHHHh
Confidence 3 4444 5789999888776543
No 44
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A
Probab=99.96 E-value=2.1e-28 Score=259.99 Aligned_cols=179 Identities=18% Similarity=0.108 Sum_probs=146.6
Q ss_pred cHHHHHHHHHHHcCCCC-Cc-cccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhhccccccCCCCcCc
Q psy14319 228 KVKALDRLVTKKAGFTS-SH-IITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQIGSS 300 (486)
Q Consensus 228 ~~~~i~~~lA~~LGf~~-a~-~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss-----~~el~~~~~~~~~GSS 300 (486)
.+..+.+.+++.|||.. +. |.++++++||+++|++++++.++++|+|||+||++|+| ||||.+|+ .++|||
T Consensus 242 ~~~~v~~~la~~LGl~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~~r~~~gei~lp~--~~~GSS 319 (467)
T 1fur_A 242 YARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPE--NEPGSS 319 (467)
T ss_dssp HHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCSEECCC--CSCCCT
T ss_pred HHHHHHHHHHHHhCCCCccCCCHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCceeEECCC--CCCCCC
Confidence 46788999999999984 33 56678999999999999999999999999999999996 99999875 569999
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccCCcchhhhhhccCCCCc
Q psy14319 301 AMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHGKENDLVDRIRADPYFA 380 (486)
Q Consensus 301 iMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~ 380 (486)
||||||||+.+|.++++|++++|++.+++.++..+|+|++...|
T Consensus 320 iMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~g~~e~~~~~~------------------------------------ 363 (467)
T 1fur_A 320 IMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRP------------------------------------ 363 (467)
T ss_dssp TCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHH------------------------------------
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccchhh------------------------------------
Confidence 99999999999999999999999999999887777888865321
Q ss_pred cccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHH-HhchhCCeeCHHHHHHHHhccCChhHHHHHHH
Q psy14319 381 PILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITL-QNVLEGLVVYPKVIQRHIDQELPFMATENIIM 459 (486)
Q Consensus 381 ~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~-~~~l~~l~v~~~~m~~~l~~~~~~~~a~~~~~ 459 (486)
.. .| .+.+++.++..++..+ ..|+++|+||+++|+++++.+.++ ++
T Consensus 364 ------------~~--------------~~-~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~~~~l--~t---- 410 (467)
T 1fur_A 364 ------------MV--------------IH-NFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLML--VT---- 410 (467)
T ss_dssp ------------HH--------------HH-HHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCSTT--HH----
T ss_pred ------------HH--------------HH-HHHHHHHHHHHHHHHHHHHHHccCeeCHHHHHHHHHhCccH--HH----
Confidence 11 12 3446677777777777 679999999999999999998775 33
Q ss_pred HHHHcCCChHHHHHHHHHH
Q psy14319 460 AMVKAGGDRQVCHEKIRVL 478 (486)
Q Consensus 460 ~L~~~g~~fr~Ah~~v~~~ 478 (486)
.|++. ++++.||++++.+
T Consensus 411 ~La~~-lg~~~a~~~~~~a 428 (467)
T 1fur_A 411 ALNTH-IGYDKAAEIAKKA 428 (467)
T ss_dssp HHHTT-SCHHHHHHHHHHH
T ss_pred HhHhh-ccHHHHHHHHHHH
Confidence 45554 6556666665543
No 45
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti}
Probab=99.96 E-value=1.4e-28 Score=262.51 Aligned_cols=184 Identities=17% Similarity=0.205 Sum_probs=148.4
Q ss_pred CcHHHHHHHHHHHcCCC--CCccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhhccccccCCCCcC
Q psy14319 227 DKVKALDRLVTKKAGFT--SSHIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQIGS 299 (486)
Q Consensus 227 ~~~~~i~~~lA~~LGf~--~a~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss-----~~el~~~~~~~~~GS 299 (486)
.....+.+.+++.+||. ...|.++++++||+++|++++|+.++.+|+|||+||++|+| ++|+ +++++++||
T Consensus 273 ~~~~~v~~~la~~~gl~f~~a~n~~~~~~~rD~~~e~~~~L~~la~~L~Kia~Dirll~S~~~~g~~Ei--~~p~~q~GS 350 (495)
T 4hgv_A 273 GFAEKVAEEIAAITGIGFTSAPNKFEALAAHDSMVFSHGAINATAAALFKIANDIRFLGSGPRSGLGEL--SLPENEPGS 350 (495)
T ss_dssp THHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCE--ECCCCSCCC
T ss_pred hHHHHHHHHHHHHhCCCccccCCHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEE--ecCcCCccc
Confidence 34556777888877765 34466789999999999999999999999999999999998 3444 467889999
Q ss_pred cCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccCCcchhhhhhccCCCC
Q psy14319 300 SAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHGKENDLVDRIRADPYF 379 (486)
Q Consensus 300 SiMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~ 379 (486)
|||||||||+.+|.++++|.+++|+..++......+|+|++...|.
T Consensus 351 SiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~~~~e~n~~~~~---------------------------------- 396 (495)
T 4hgv_A 351 SIMPGKVNPTQCEALTQVCVQVFGNHAALTFAGSQGHFELNVYNPL---------------------------------- 396 (495)
T ss_dssp -----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHH----------------------------------
T ss_pred ccCccccChHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchH----------------------------------
Confidence 9999999999999999999999999999988888888888764321
Q ss_pred ccccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHHHHHhccCChhHHHHHHH
Q psy14319 380 APILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIM 459 (486)
Q Consensus 380 ~~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~~~~~a~~~~~ 459 (486)
-.|..+++++.++++++.++..|+++|+||+++|+++++.+.+++ .
T Consensus 397 ----------------------------~~~~ll~s~~~l~~~~~~~~~~~i~gl~vn~erm~~~l~~s~~lv------t 442 (495)
T 4hgv_A 397 ----------------------------MAYNFLQSVQLLADAAISFTDNCVVGIEAREDNIKAALDRSLMLV------T 442 (495)
T ss_dssp ----------------------------HHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCSGGG------G
T ss_pred ----------------------------HHHHHHHHHHHHHHHHHHHHHHHhccCEECHHHHHHHHhcChhHH------H
Confidence 146789999999999999999999999999999999999876543 3
Q ss_pred HHHHcCCChHHHHHHHHHHHHH
Q psy14319 460 AMVKAGGDRQVCHEKIRVLSHQ 481 (486)
Q Consensus 460 ~L~~~g~~fr~Ah~~v~~~~~~ 481 (486)
+|+++ ++++.||++++++.++
T Consensus 443 aL~~~-iGy~~A~~iak~A~~~ 463 (495)
T 4hgv_A 443 ALAPK-IGYDNAAKIAKTAHKN 463 (495)
T ss_dssp GTHHH-HCHHHHHHHHHHHHHH
T ss_pred HhhHH-HHHHHHHHHHHHHHHh
Confidence 45666 5678888888776654
No 46
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A
Probab=99.96 E-value=1.8e-28 Score=260.33 Aligned_cols=185 Identities=17% Similarity=0.204 Sum_probs=138.9
Q ss_pred CCCCCcHHHHHHHHHHHcCCCC--CccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhhccccccCC
Q psy14319 223 PGDGDKVKALDRLVTKKAGFTS--SHIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFEST 295 (486)
Q Consensus 223 ~~~g~~~~~i~~~lA~~LGf~~--a~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss-----~~el~~~~~~~ 295 (486)
+.+...+..+.+.+++.|||+. ..|.++++++||+++|++++|+.++.+|+|||+||++|+| ||||.+| ..
T Consensus 257 ~~~~~~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp--~~ 334 (478)
T 3ocf_A 257 NASHAYAEQAIVELSQISGIELKATGNLVEASWDTGAFVTFSGILRRIAVKLSKIANDLRLLSSGPRSGLGEIRLP--AV 334 (478)
T ss_dssp ----CHHHHHHHHHHHHHTSCCEECSCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCBSSSSCCCEECC--CC
T ss_pred CCChhHHHHHHHHHHHhcCCCCccCCChhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeEEECC--CC
Confidence 3444557788899999999984 2366788999999999999999999999999999999996 8999987 47
Q ss_pred CCcCcCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccCCcchhhhhhcc
Q psy14319 296 QIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHGKENDLVDRIRA 375 (486)
Q Consensus 296 ~~GSSiMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~ 375 (486)
++|||||||||||+.+|.++++|++++|+..+++.++..+++|.
T Consensus 335 q~GSSiMP~K~NPv~~E~i~~~a~~V~G~~~~i~~a~~~g~lel------------------------------------ 378 (478)
T 3ocf_A 335 QPGSSIMPGKVNPVIPESVNQVCYQVIGNDLTVTMAAESGQLQL------------------------------------ 378 (478)
T ss_dssp SCCBTTBTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTB------------------------------------
T ss_pred CCcCCCCCcccCcHHHHHHHHHHHHHHhHHHHHHHHHhcCcchh------------------------------------
Confidence 99999999999999999999999999999998877654333322
Q ss_pred CCCCccccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHHHHHhccCChhHHH
Q psy14319 376 DPYFAPILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATE 455 (486)
Q Consensus 376 ~~~~~~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~~~~~a~ 455 (486)
+++.|.+ .|..+..+..+...+..+...|++||+||++||+++++.+.+++ +
T Consensus 379 ------------n~~~p~i--------------~~~l~~s~~ll~~~~~~~~~~~v~gl~vn~erm~~~l~~s~~lv--t 430 (478)
T 3ocf_A 379 ------------NAFEPLI--------------VYNILSSMRLLGRAMTNLAERCVDGIEANVERCRAGAEESISLA--T 430 (478)
T ss_dssp ------------CTTHHHH--------------HHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHTCGGGG--G
T ss_pred ------------cccchhH--------------HHHHHHHHHHHHHHHHHHHHHhhCCCEECHHHHHHHHHhCccHH--H
Confidence 1122221 12344444455555556667799999999999999999886644 3
Q ss_pred HHHHHHHHcCCChHHHHHHHHHH
Q psy14319 456 NIIMAMVKAGGDRQVCHEKIRVL 478 (486)
Q Consensus 456 ~~~~~L~~~g~~fr~Ah~~v~~~ 478 (486)
+| .+. ++++.|+++++++
T Consensus 431 aL----a~~-igy~~a~~ia~~A 448 (478)
T 3ocf_A 431 AL----VPV-VGYARAAEIAKQA 448 (478)
T ss_dssp GG----HHH-HHHHHHHHHHHHH
T ss_pred Hh----hHH-HHHHHHHHHHHHH
Confidence 44 444 3445555554443
No 47
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1
Probab=99.96 E-value=1.5e-28 Score=261.27 Aligned_cols=177 Identities=17% Similarity=0.180 Sum_probs=143.3
Q ss_pred cHHHHHHHHHHHcCCCC-Cc-cccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhhccccccCCCCcCc
Q psy14319 228 KVKALDRLVTKKAGFTS-SH-IITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQIGSS 300 (486)
Q Consensus 228 ~~~~i~~~lA~~LGf~~-a~-~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss-----~~el~~~~~~~~~GSS 300 (486)
....+.+.+++.|||.. +. |.++++++||+++|++++++.++++|+|||+||++|+| ||||.+|+ .++|||
T Consensus 242 ~~~~v~~~la~~LG~~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~~r~~~gei~lp~--~~~GSS 319 (466)
T 1vdk_A 242 FGELVAKYLAEETGLPFRVAENRFAALAAHDELVNVMGAIRTLAGALMKIGNDVRWLASGPYAGIGEITIPA--NEPGSS 319 (466)
T ss_dssp HHHHHHHHHHHHHSSCCEECSCTTHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCBSSSSCCSEECCC--CSCCSS
T ss_pred HHHHHHHHHHHHcCCCCCCCcchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceeEECCC--CCCcCC
Confidence 35788999999999995 33 66789999999999999999999999999999999996 99999986 479999
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccCCcchhhhhhccCCCCc
Q psy14319 301 AMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHGKENDLVDRIRADPYFA 380 (486)
Q Consensus 301 iMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~ 380 (486)
||||||||+.+|.++++|++++|++.+++.++..+++|++.
T Consensus 320 iMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~g~~e~~~--------------------------------------- 360 (466)
T 1vdk_A 320 IMPGKVNPTQVEALTMVVVRVYGNDHTVAFAGSQGNFQLNV--------------------------------------- 360 (466)
T ss_dssp CCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCBTTBCS---------------------------------------
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHccchhhhh---------------------------------------
Confidence 99999999999999999999999999998876544444432
Q ss_pred cccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHH-HhchhCCeeCHHHHHHHHhccCChhHHHHHHH
Q psy14319 381 PILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITL-QNVLEGLVVYPKVIQRHIDQELPFMATENIIM 459 (486)
Q Consensus 381 ~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~-~~~l~~l~v~~~~m~~~l~~~~~~~~a~~~~~ 459 (486)
+.|.. |..+++++.++..++..+ ..|+++|+||++||+++++.+.++ ++.++.
T Consensus 361 ---------~~~~~---------------~~~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~~~~l--~t~La~ 414 (466)
T 1vdk_A 361 ---------YKPVM---------------AYSTLESINLLADAVASFDAHLAQGIEPNLERIEEYLQKNPML--ATALNK 414 (466)
T ss_dssp ---------CHHHH---------------HHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHTTCGGG--GHHHHH
T ss_pred ---------hhHHH---------------HHHHHHHHHHHHHHHHHHHHHHhccCEEcHHHHHHHHHhcchH--HHHHHH
Confidence 22221 235778888888888888 569999999999999999887664 455555
Q ss_pred HHHHcCCChHHHHHHHH
Q psy14319 460 AMVKAGGDRQVCHEKIR 476 (486)
Q Consensus 460 ~L~~~g~~fr~Ah~~v~ 476 (486)
.| +++.||++|+
T Consensus 415 ~l-----g~~~a~~~v~ 426 (466)
T 1vdk_A 415 AI-----GYDKAAEIVK 426 (466)
T ss_dssp HH-----CSHHHHTTTT
T ss_pred hc-----cHHHHHHHHH
Confidence 33 4444444443
No 48
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1
Probab=99.95 E-value=5e-28 Score=257.81 Aligned_cols=179 Identities=20% Similarity=0.207 Sum_probs=144.6
Q ss_pred cHHHHHHHHHHHcCCCC--CccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhhccccccCCCCcCc
Q psy14319 228 KVKALDRLVTKKAGFTS--SHIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH-----MKEIEEPFESTQIGSS 300 (486)
Q Consensus 228 ~~~~i~~~lA~~LGf~~--a~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss-----~~el~~~~~~~~~GSS 300 (486)
....+.+.+++.|||+. ..|.++++++||+++|++++|+.++++|+|||+||++|+| ||||.+|+ .++|||
T Consensus 267 ~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsS~pr~g~gei~lp~--~~~GSS 344 (488)
T 1yfm_A 267 FDVKIAEQISKETGLKFQTAPNRFEALAAHDAIVECSGALNTLACSLFKIAQDIRYLGSGPRCGYHELMLPE--NEPGSS 344 (488)
T ss_dssp HHHHHHHHHHHHHSSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECCC--CSCCCT
T ss_pred HHHHHHHHHHHHhCCCCccCccHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCceeEECCC--CCCcCC
Confidence 36788999999999985 2356788999999999999999999999999999999996 99999885 579999
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccCCcchhhhhhccCCCCc
Q psy14319 301 AMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHGKENDLVDRIRADPYFA 380 (486)
Q Consensus 301 iMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~ 380 (486)
||||||||+.+|.++++|++++|++.+++.++..+++|++.
T Consensus 345 iMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~--------------------------------------- 385 (488)
T 1yfm_A 345 IMPGKVNPTQNEALTQVCVQVMGNNAAITFAGSQGQFELNV--------------------------------------- 385 (488)
T ss_dssp TSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCBTTBCS---------------------------------------
T ss_pred CcccccCcHHHHHHHHHHHHHHhHHHHHHHHHhcccchhhh---------------------------------------
Confidence 99999999999999999999999999998876544554432
Q ss_pred cccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHH-HhchhCCeeCHHHHHHHHhccCChhHHHHHHH
Q psy14319 381 PILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITL-QNVLEGLVVYPKVIQRHIDQELPFMATENIIM 459 (486)
Q Consensus 381 ~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~-~~~l~~l~v~~~~m~~~l~~~~~~~~a~~~~~ 459 (486)
+.|.. |..+.+++.++..++..+ ..|++||+||++||+++++.+.+++ +
T Consensus 386 ---------~~p~~---------------~~~l~~s~~~l~~~l~~~~~~~i~gl~vn~erm~~~l~~s~~l~--t---- 435 (488)
T 1yfm_A 386 ---------FKPVM---------------IANLLNSIRLITDAAYSFRVHCVEGIKANEPRIHELLTKSLMLV--T---- 435 (488)
T ss_dssp ---------CHHHH---------------HHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCSGGG--T----
T ss_pred ---------hhHHH---------------HHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHccCchHH--H----
Confidence 22221 224667777777777777 6699999999999999999987754 3
Q ss_pred HHHHcCCChHHHHHHHHHH
Q psy14319 460 AMVKAGGDRQVCHEKIRVL 478 (486)
Q Consensus 460 ~L~~~g~~fr~Ah~~v~~~ 478 (486)
.|++. ++++.|+++++++
T Consensus 436 ~La~~-lg~~~a~~i~~~a 453 (488)
T 1yfm_A 436 ALNPK-IGYDAASKVAKNA 453 (488)
T ss_dssp TTGGG-TCHHHHHHHHHHH
T ss_pred HHHHh-ccHHHHHHHHHHH
Confidence 44555 5666666665554
No 49
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A
Probab=99.94 E-value=6.1e-27 Score=241.21 Aligned_cols=162 Identities=22% Similarity=0.175 Sum_probs=125.4
Q ss_pred cCCCCCCcccccccccCCCCCCCcHHHHHHHHHHHcCCCCCccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14319 205 IIPDNRLSSHHTTKRSGRPGDGDKVKALDRLVTKKAGFTSSHIITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH 284 (486)
Q Consensus 205 ~~~~~~g~~~~~~~~~~~~~~g~~~~~i~~~lA~~LGf~~a~~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss 284 (486)
.++|..||.+ ..+..++.+++++++.|||..+. .++++||+++|++++++.++++|+|||+||++|++
T Consensus 193 ~lGgavGT~~---------~~~~~~~~~~~~~a~~LG~~~~~---~~~~~RD~~~e~~~~l~~~a~~L~kia~Dirll~s 260 (359)
T 2fel_A 193 QFGGAAGTLE---------KLGDNAGAVRADLAKRLGLADRP---QWHNQRDGIAEFANLLSLVTGTLGKFGQDIALMAE 260 (359)
T ss_dssp CCCCTTSSCT---------TTGGGHHHHHHHHHHHHTCBCCC---CCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHhccCc---------cCcchHHHHHHHHHHHhCcCCCc---hHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3667777753 23345689999999999999863 58899999999999999999999999999999999
Q ss_pred hh-hccccccCCCCcCcCCCCCCCchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhcc
Q psy14319 285 MK-EIEEPFESTQIGSSAMAYKRNPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQH 363 (486)
Q Consensus 285 ~~-el~~~~~~~~~GSSiMPqKrNP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (486)
-+ |+.+|+ ++|||||||||||+.+|.++++++++.|.+.+.+ .++.+|+||+.+.|.
T Consensus 261 ~e~Ei~~~~---~~GSS~MP~K~NP~~~E~i~~~a~~v~~~~~~~~-~~~~~~~er~~~~~~------------------ 318 (359)
T 2fel_A 261 IGSEIRLSG---GGGSSAMPHKQNPVNAETLVTLARFNAVQISALH-QSLVQEQERSGAGWM------------------ 318 (359)
T ss_dssp HCTTEEEC---------------CCHHHHHHHHHHHHHHHHHHHHH-HTTCCCSSBCHHHHH------------------
T ss_pred CCCeecCCC---CCCCccCCcccCCHHHHHHHHHHHHHHHHHHHHH-HHhhccCCCCCcccH------------------
Confidence 54 787764 5999999999999999999999999999999877 457889999886542
Q ss_pred CCcchhhhhhccCCCCccccccCCCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHHH
Q psy14319 364 GKENDLVDRIRADPYFAPILNQMPTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQR 443 (486)
Q Consensus 364 g~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~ 443 (486)
.+|..+++++.+++.++..+..++++|+||+++|..
T Consensus 319 --------------------------------------------~e~~~lp~~~~~~~~~L~~~~~v~~~l~v~~~~m~~ 354 (359)
T 2fel_A 319 --------------------------------------------LEWLTLPQMVTATGTSLLVAERLAAQIDRLGADESH 354 (359)
T ss_dssp --------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC----
T ss_pred --------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHhCc
Confidence 135589999999999999999999999999999987
Q ss_pred H
Q psy14319 444 H 444 (486)
Q Consensus 444 ~ 444 (486)
+
T Consensus 355 ~ 355 (359)
T 2fel_A 355 H 355 (359)
T ss_dssp -
T ss_pred c
Confidence 5
No 50
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1
Probab=99.90 E-value=2.9e-24 Score=227.83 Aligned_cols=188 Identities=18% Similarity=0.098 Sum_probs=160.2
Q ss_pred HHHHHHHHcCCCCCc-cccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhhccccccCCCCcCcCCCCCCCc
Q psy14319 232 LDRLVTKKAGFTSSH-IITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH--MKEIEEPFESTQIGSSAMAYKRNP 308 (486)
Q Consensus 232 i~~~lA~~LGf~~a~-~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss--~~el~~~~~~~~~GSSiMPqKrNP 308 (486)
.++++++.|||..+. |.++++++||+++|++++++.++++|+|||+||++|++ ||||+.| +...+|||||||||||
T Consensus 208 ~~~~la~~LGl~~~~~n~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~e~g~iel~-e~~~~GSSiMP~K~NP 286 (457)
T 1tj7_A 208 DREQLAGWLGFASATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNTGEAGFVELS-DRVTSGSSLMPQKKNP 286 (457)
T ss_dssp CHHHHHHHHTCSSBCSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCEECC-GGGCBCCTTCTTCCBC
T ss_pred CHHHHHHHcCCCCCCCChHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceecc-CCCCCCCCCCCCCCCc
Confidence 468899999998654 55579999999999999999999999999999999999 8966543 2224899999999999
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccCCcchhhhhhccCCCCccccccCCC
Q psy14319 309 MRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHGKENDLVDRIRADPYFAPILNQMPT 388 (486)
Q Consensus 309 ~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~ 388 (486)
+.+|.++++|++++|++.+++.+... ++ .++++|+
T Consensus 287 ~~~E~i~~~a~~v~g~~~~~~~~~~~------~p--------------------~~~~RDl------------------- 321 (457)
T 1tj7_A 287 DALELIRGKCGRVQGALTGMMMTLKG------LP--------------------LAYNKDM------------------- 321 (457)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHTT------CC--------------------SSCCGGG-------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc------Cc--------------------HHhhcch-------------------
Confidence 99999999999999999988765321 11 1233333
Q ss_pred CCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHHHHHhccCChhHHHHHHHHHHHcCCCh
Q psy14319 389 LLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDR 468 (486)
Q Consensus 389 ~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~~~~~a~~~~~~L~~~g~~f 468 (486)
| ++|..+++++.++..++..+..|+++|+||+++|+++++ .+++++|++++.||++|+||
T Consensus 322 -------------~-----~~~~~l~~s~~~~~~~l~~~~~~l~gl~vn~~~m~~~l~--~~~~~at~l~~~Lv~~G~~~ 381 (457)
T 1tj7_A 322 -------------Q-----EDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQ--QGYANATELADYLVAKGVPF 381 (457)
T ss_dssp -------------G-----GHHHHHHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHT--STTTTHHHHHHHHHHTTCCH
T ss_pred -------------h-----hHHhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHh--cCCchHHHHHHHHHHcCCCH
Confidence 1 135689999999999999999999999999999999995 46899999999999999999
Q ss_pred HHHHHHHHHHHHHhhhc
Q psy14319 469 QVCHEKIRVLSHQAGAQ 485 (486)
Q Consensus 469 r~Ah~~v~~~~~~a~~~ 485 (486)
|+||++|++++++|.++
T Consensus 382 r~Ay~~v~~~~~~a~~~ 398 (457)
T 1tj7_A 382 REAHHIVGEAVVEAIRQ 398 (457)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998653
No 51
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus}
Probab=99.89 E-value=5.5e-24 Score=225.98 Aligned_cols=190 Identities=19% Similarity=0.172 Sum_probs=160.8
Q ss_pred HHHHHHHHHHcCCCCCc-cccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhhccccccCCCCcCcCCCCCC
Q psy14319 230 KALDRLVTKKAGFTSSH-IITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH--MKEIEEPFESTQIGSSAMAYKR 306 (486)
Q Consensus 230 ~~i~~~lA~~LGf~~a~-~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss--~~el~~~~~~~~~GSSiMPqKr 306 (486)
+..++++++.|||..+. |.++++++||+++|++++++.++++|+|||+||++|++ ||||+.| +...+|||||||||
T Consensus 209 ~~~~~~~a~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~s~e~g~iel~-e~~~~GSSiMP~K~ 287 (462)
T 2e9f_A 209 PIDRHFTARELGFKAPMRNSLDAVASRDFALEVLSALNIGMLHLSRMAEELILYSTEEFGFVEVP-DAFATGSSIMPQKK 287 (462)
T ss_dssp CCCHHHHHHHTTCSEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCEECC-GGGCEECSSSSSCE
T ss_pred CCCHHHHHHHhCCCCCCCCcHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEec-CCCCCCCCCCCCCc
Confidence 34578899999999654 55579999999999999999999999999999999999 9966544 22237999999999
Q ss_pred CchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccCCcchhhhhhccCCCCccccccC
Q psy14319 307 NPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHGKENDLVDRIRADPYFAPILNQM 386 (486)
Q Consensus 307 NP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~ 386 (486)
||+.+|.++++|++++|++.+++.+... ++ .++++|+
T Consensus 288 NP~~~E~i~~~a~~v~g~~~~~~~~~~~------~p--------------------~~~~rDl----------------- 324 (462)
T 2e9f_A 288 NPDILELIRAKAGRVLGAFVGLSAVVKG------LP--------------------LAYNKDL----------------- 324 (462)
T ss_dssp ECHHHHHHHHTHHHHHHHHHHHHHHHTT------CC--------------------SSBCGGG-----------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhC------Cc--------------------hHhhhch-----------------
Confidence 9999999999999999999988765321 11 1233343
Q ss_pred CCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHHHHHhccCChhHHHHHHHHHHHcCC
Q psy14319 387 PTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGG 466 (486)
Q Consensus 387 ~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~~~~~a~~~~~~L~~~g~ 466 (486)
|+ .|..+++++.++..++..+..++++|+||+++|+++++ .+++++|++++.||++|+
T Consensus 325 ---------------~~-----~~~~l~~s~~~~~~~l~~~~~~l~gl~vn~e~m~~~l~--~~~~~at~l~~~Lv~~G~ 382 (462)
T 2e9f_A 325 ---------------QE-----DKEPLLDALATYRDSLRLLAALLPGLKWRRERMWRAAE--GGYTLATELADYLAEKGL 382 (462)
T ss_dssp ---------------GG-----GHHHHHHHHHHHHHHHHHHHHHGGGCEECHHHHHHHHS--CSSTTHHHHHHHHHHHTC
T ss_pred ---------------hh-----hHhHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHHh--cCccHHHHHHHHHHHcCC
Confidence 11 24578999999999999999999999999999999997 468899999999999999
Q ss_pred ChHHHHHHHHHHHHHhhhc
Q psy14319 467 DRQVCHEKIRVLSHQAGAQ 485 (486)
Q Consensus 467 ~fr~Ah~~v~~~~~~a~~~ 485 (486)
|||+||++|++++++|.++
T Consensus 383 ~~r~ay~~v~~~~~~a~~~ 401 (462)
T 2e9f_A 383 PFREAHHVVGRLVRRLVEE 401 (462)
T ss_dssp CSHHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHHH
Confidence 9999999999999998653
No 52
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A
Probab=99.89 E-value=5.7e-24 Score=226.20 Aligned_cols=189 Identities=17% Similarity=0.173 Sum_probs=159.8
Q ss_pred HHHHHHHHHHcCCCCCc-cccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhhccccccCCCCcCcCCCCCC
Q psy14319 230 KALDRLVTKKAGFTSSH-IITGQTYSRKVDVIVTGVLSSLGASIHKLATDLRLLAH--MKEIEEPFESTQIGSSAMAYKR 306 (486)
Q Consensus 230 ~~i~~~lA~~LGf~~a~-~~~~~~~~rd~~~e~~~~l~~~~~~l~rla~Dl~l~ss--~~el~~~~~~~~~GSSiMPqKr 306 (486)
+..++++++.|||..+. |.++++++||+++|++++++.++++|+|||+||++|++ ||||+.| +...+|||||||||
T Consensus 212 ~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~s~e~g~iel~-e~~~~GSSiMP~K~ 290 (468)
T 1k7w_A 212 DIDREMLRSELEFASISLNSMDAISERDFVVEFLSFATLLMIHLSKMAEDLIIYSTSEFGFLTLS-DAFSTGASLMPQKK 290 (468)
T ss_dssp CCCHHHHHHHHTCSEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCEECC-GGGCEEETTEEEEE
T ss_pred CCChHHHHHHcCCCCCCCChHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceecc-CCCCCCCCCCCCCC
Confidence 34578899999999654 55579999999999999999999999999999999999 8966544 22237999999999
Q ss_pred CchHHHHHHHHHHHHHHHhHHHHHHhhhhHhhhcccccCCCCCCccccchhhhhhccCCcchhhhhhccCCCCccccccC
Q psy14319 307 NPMRSERLCSLARFLMSLHQNSLATASTQWMERTLDDSANRFPTKSVFSCVTQVKQHGKENDLVDRIRADPYFAPILNQM 386 (486)
Q Consensus 307 NP~~~E~~~~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~ 386 (486)
||+.+|.++++|++++|++.+++.+... ++ .++++|+
T Consensus 291 NP~~~E~i~~~a~~v~g~~~~~~~~~~~------~p--------------------~~~~rDl----------------- 327 (468)
T 1k7w_A 291 NPDSLELIRSKAGRVFGRLASILMVLKG------LP--------------------STYNKDL----------------- 327 (468)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHTT------CC--------------------SSCCGGG-----------------
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHhC------Cc--------------------hHhhhhh-----------------
Confidence 9999999999999999999988765321 11 1233343
Q ss_pred CCCCCCccccCCchhHhhhhhhcccchHHHHHHHHHHHHHHHhchhCCeeCHHHHHHHHhccCChhHHHHHHHHHHHcCC
Q psy14319 387 PTLLDPKSFYGRAPEQQRLSAKGIHTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGG 466 (486)
Q Consensus 387 ~~~~~p~~~~~~~~~q~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~~~~~a~~~~~~L~~~g~ 466 (486)
|+ .|..+++++.++..++..+..++++|+||+++|+++++. + +++|++++.||++|+
T Consensus 328 ---------------~~-----~~~~l~~s~~~~~~~l~~~~~~l~gl~vn~e~m~~~l~~--~-~~at~l~~~Lv~~G~ 384 (468)
T 1k7w_A 328 ---------------QE-----DKEAVFDVVDTLTAVLQVATGVISTLQISKENMEKALTP--E-MLATDLALYLVRKGV 384 (468)
T ss_dssp ---------------GG-----HHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHTCCG--G-GGHHHHHHHHHTTTC
T ss_pred ---------------hh-----hHhHHHHHHHHHHHHHHHHHHHhCCCEECHHHHHHHhhC--C-ChHHHHHHHHHHcCC
Confidence 11 245789999999999999999999999999999999974 4 899999999999999
Q ss_pred ChHHHHHHHHHHHHHhhhc
Q psy14319 467 DRQVCHEKIRVLSHQAGAQ 485 (486)
Q Consensus 467 ~fr~Ah~~v~~~~~~a~~~ 485 (486)
|||+||++|++++++|.++
T Consensus 385 ~~r~ay~~v~~~~~~a~~~ 403 (468)
T 1k7w_A 385 PFRQAHTASGKAVHLAETK 403 (468)
T ss_dssp CHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998653
Done!