Query psy1432
Match_columns 850
No_of_seqs 332 out of 2370
Neff 5.0
Searched_HMMs 13730
Date Fri Aug 16 16:51:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1432.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/1432hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pw4a_ f.38.1.1 (A:) Glycerol 99.9 2.9E-22 2.1E-26 211.3 36.9 159 260-472 45-203 (447)
2 d1pv7a_ f.38.1.2 (A:) Lactose 99.9 8.1E-21 5.9E-25 193.7 32.1 400 239-826 7-408 (417)
3 d1pw4a_ f.38.1.1 (A:) Glycerol 99.3 1.6E-11 1.2E-15 128.4 20.2 179 239-470 249-428 (447)
4 d1pv7a_ f.38.1.2 (A:) Lactose 99.1 1.7E-10 1.2E-14 116.5 14.9 145 270-472 254-399 (417)
5 d1emxa_ g.3.6.2 (A:) Heteropda 7.9 69 0.005 21.2 1.2 18 100-117 1-20 (30)
6 d1dcea2 b.7.4.1 (A:242-350) Ra 5.0 91 0.0066 26.6 0.7 10 19-28 43-52 (109)
7 d1ufwa_ d.58.7.1 (A:) Synaptoj 4.2 1.1E+02 0.0084 25.4 0.8 29 121-149 10-39 (95)
8 d1x6ea2 g.37.1.1 (A:41-66) Zin 3.9 1.1E+02 0.0078 19.8 0.3 9 111-119 6-14 (26)
9 d1y7ua1 d.38.1.1 (A:8-171) Acy 3.9 2.3E+02 0.017 24.9 2.8 34 61-97 51-85 (164)
10 d1jz8a3 b.18.1.5 (A:13-219) be 3.6 2.3E+02 0.017 25.6 2.5 42 39-87 155-196 (207)
No 1
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=99.92 E-value=2.9e-22 Score=211.31 Aligned_cols=159 Identities=14% Similarity=0.054 Sum_probs=130.8
Q ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCccceeeeecccchhhhhhhhhhccccccccccccc
Q psy1432 260 TMLSLYLRDVLKFSEKDATVLYHIFYALCYFVPIIGAILADSFYGRYRTIRVFSFDATVLYHIFYALCYFVPIIGAILAD 339 (850)
Q Consensus 260 t~L~~YLt~~LGls~~~a~~i~~i~~i~~~~~~~lgG~LADr~lGr~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (850)
+.+..++. ++|+|..+.+++.+++.++..++.+++|+++||+ |
T Consensus 45 ~~~~p~~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g----------------------------------- 87 (447)
T d1pw4a_ 45 ALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-N----------------------------------- 87 (447)
T ss_dssp HHHHHHTT-SSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHS-C-----------------------------------
T ss_pred HHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C-----------------------------------
Confidence 34445665 5899999999999999999999999999999999 9
Q ss_pred ccccceehhhHHHHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHhhchhhHHHHHHHhhcCCCcccchhhhHHHH
Q psy1432 340 SFYGRYRTIRVFSFVYVLGNILLCLGAVPTLALPTIKTTLLGLIFIGIGTGGIKPCVAALCGEQFCVPEQRFYLERFFSV 419 (850)
Q Consensus 340 ~~~~Rr~vili~~i~~~lg~ll~al~a~p~l~~~~~~lliialil~glG~g~~~~~~~al~ae~fp~p~~~~~r~s~~~~ 419 (850)
||+++.++.++..++.+++++..... .+...+++.+++.|++.++..++..++++|.+| +++|++++++
T Consensus 88 ----~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~----~~~r~~~~~~ 156 (447)
T d1pw4a_ 88 ----PRVFLPAGLILAAAVMLFMGFVPWAT---SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWS----QKERGGIVSV 156 (447)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHCHHHH---SSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCT----TTHHHHHHHH
T ss_pred ----chHHHHHHHHHHHHHHhhccccchhh---hhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH----hhcccccccc
Confidence 99999999888888877776532111 233678888999999999999999999999998 7889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCccchHHHHHHHHHHHHHHHHHHHh
Q psy1432 420 YYFIINIGGFLGMIFIPMIRKSIPCYGGESCYALGFVVPAVLMVLALVMFVVG 472 (850)
Q Consensus 420 ~~~~~~iGg~iap~I~~~I~~~~g~~g~~~~w~~~f~I~a~l~lvalv~~~~~ 472 (850)
.+...++|+.++|.+++.+....+ +|+..|++.+.+.++..+..+..
T Consensus 157 ~~~~~~~g~~i~~~~~~~~~~~~~------~w~~~~~~~~~~~~~~~~~~~~~ 203 (447)
T d1pw4a_ 157 WNCAHNVGGGIPPLLFLLGMAWFN------DWHAALYMPAFCAILVALFAFAM 203 (447)
T ss_dssp HHHHHHHHHTSHHHHHHHHHHHTC------CSTTCTHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhHhhhhh------cccccchhhhhhHHHHHHHHHHh
Confidence 999999999999999988877642 59999988877666555544444
No 2
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}
Probab=99.89 E-value=8.1e-21 Score=193.67 Aligned_cols=400 Identities=10% Similarity=0.042 Sum_probs=224.2
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCccceeeeecccchh
Q psy1432 239 KSIYLILTIEFCERFSFCGLRTMLSLYLRDVLKFSEKDATVLYHIFYALCYFVPIIGAILADSFYGRYRTIRVFSFDATV 318 (850)
Q Consensus 239 r~i~~i~~~~~~~~~~~y~~~t~L~~YLt~~LGls~~~a~~i~~i~~i~~~~~~~lgG~LADr~lGr~k~l~~~~~~~~~ 318 (850)
|++|......++..++.....+++|.|+++++|+|..+.+++.+++.+...++.+++|+++||+ |
T Consensus 7 ~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~-g-------------- 71 (417)
T d1pv7a_ 7 TNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKL-G-------------- 71 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH-T--------------
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-C--------------
Confidence 6788888888888888888888999999999999999999999999999999999999999999 9
Q ss_pred hhhhhhhhcccccccccccccccccceehhhHHHHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHhhchhhHHHH
Q psy1432 319 LYHIFYALCYFVPIIGAILADSFYGRYRTIRVFSFVYVLGNILLCLGAVPTLALPTIKTTLLGLIFIGIGTGGIKPCVAA 398 (850)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~Rr~vili~~i~~~lg~ll~al~a~p~l~~~~~~lliialil~glG~g~~~~~~~a 398 (850)
||++++++.++..++.++..+..... ......++...+.+.+.+........
T Consensus 72 -------------------------rr~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (417)
T d1pv7a_ 72 -------------------------LRKYLLWIITGMLVMFAPFFIFIFGP---LLQYNILVGSIVGGIYLGFCFNAGAP 123 (417)
T ss_dssp -------------------------TCTHHHHHHHHHHHTHHHHHHHTHHH---HHHTTCHHHHHHTTTTGGGGGTTHHH
T ss_pred -------------------------chHHHHHHHHHHHHHHHHHHHhhhhh---hHHHHHHHHHHHhhhcccccccchhh
Confidence 88888888776666666555432110 00011122222333333333333333
Q ss_pred HHHhhcCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccchHHHHHHHHHHHHHHHHHHHhcccccc
Q psy1432 399 LCGEQFCVPEQRFYLERFFSVYYFIINIGGFLGMIFIPMIRKSIPCYGGESCYALGFVVPAVLMVLALVMFVVGKPMYTI 478 (850)
Q Consensus 399 l~ae~fp~p~~~~~r~s~~~~~~~~~~iGg~iap~I~~~I~~~~g~~g~~~~w~~~f~I~a~l~lvalv~~~~~~~~~~~ 478 (850)
...+..+ +..+++....+........+..++|.+++++.+. +|+..+.+......+..+......+..+.
T Consensus 124 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (417)
T d1pv7a_ 124 AVEAFIE--KVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI--------NNQFVFWLGSGCALILAVLLFFAKTDAPS 193 (417)
T ss_dssp HHHHHHH--HHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHH--------CHHHHHHHHHHHHHHHHHHHHSSCCCSCS
T ss_pred ccccccc--chhhhhHHHHHHHhhhhccccccccccccccccc--------cccccccchhhHHHHHHHHHHHHhccccc
Confidence 3333322 2233445555666667788888999999988775 25555555554444444433333322221
Q ss_pred cCCchhhHHHHHHHHHHhhhhcccCCchhhhhhhhhhhhcccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q psy1432 479 RCPKKNIILQFLKCMFYSLSKKLSSSPYQKKAHWLDYAEDEYSPRLISDMKTVLAILFVFIPLPLFWSLFDQLGSSWTFQ 558 (850)
Q Consensus 479 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ld~a~~~~s~~~v~~~k~ll~~l~v~~~~ilf~~~~~q~~s~l~~~ 558 (850)
.+...+. .+..... ....+. .+.... +...............+.. ........
T Consensus 194 ~~~~~~~-------------~~~~~~~----~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 246 (417)
T d1pv7a_ 194 SATVANA-------------VGANHSA----FSLKLA------LELFRQ-PKLWFLSLYVIGVSCTYDV---FDQQFANF 246 (417)
T ss_dssp SSCSSHH-------------HHSCCCC----CCHHHH------HHHTTS-SHHHHHHHHHHHHHHHHHH---HHHHHHHH
T ss_pred chhhhhh-------------hhhhccc----cccccc------cccccc-ccccchhhhhHHHHHHHHh---hhcccccc
Confidence 1111110 0000000 000000 000001 1111111111111111111 11111111
Q ss_pred HHhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchhHHHHHHHHHHHHHHHHHHhhhhccCCCC
Q psy1432 559 AARTDSQIFGIHILPDQMQVISPMLSLILIPLFDNCIYPALDKIRILENPLRRMVCGGCIAGFAFISAGYVELNLQENPP 638 (850)
Q Consensus 559 a~~~~~~~~~~~i~~~~~~vi~~l~ili~~pl~~~~i~~~l~r~g~~~~~~~~m~iG~~i~~ls~l~~a~~~~~~~~~~~ 638 (850)
........+..............+...+...+.++ ..+|. ++.+.+.++.++.+++.+.....
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~r~----~~~~~~~~~~~~~~~~~~~~~~~--------- 309 (417)
T d1pv7a_ 247 FTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPL----IINRI----GGKNALLLAGTIMSVRIIGSSFA--------- 309 (417)
T ss_dssp HTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTHHH----HHHHH----CHHHHHHHHHHHHHHHHHHHHTC---------
T ss_pred ccccccccccchhhhcccccccccccccchhhhhh----hhccc----ccccchhhhHHHHHHhhhccccc---------
Confidence 11111000000000111112222222222222221 12333 34555667777776666555421
Q ss_pred CCccccccccCccccccccccccccccccccccccccccccccccCCCCCCCCCCccccccCCCcccccccccccccchh
Q psy1432 639 ESTTKLECYNGFMKNATEWSKNSLSFMGNRALFLTGDRTNRKNIENGNLGGTSGNMTEVKNGNSSSITNNKNITSKFQVF 718 (850)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 718 (850)
T Consensus 310 -------------------------------------------------------------------------------- 309 (417)
T d1pv7a_ 310 -------------------------------------------------------------------------------- 309 (417)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccHHHHHHHH-HHHHHHHHHHHHHHHHHhhcc-ch
Q psy1432 719 SKLLILSPGRTVKLIYMVPQYVLMSIGEVMFAIAGLHFSFTQAPRSMKTVTIAAW-QLSVALGNLIIICIEQLRGYV-GQ 796 (850)
Q Consensus 719 ~~~~~~~~~~~~s~~~li~~yvl~gige~l~~p~~~~~~~~~aP~~~rg~~~gl~-~~~~~lG~~i~~~i~~~~~~~-~~ 796 (850)
.+.+.++...++.+++.+...+...++..+.+|++.||.++|+. ++...+|..+++.+.+...+. +.
T Consensus 310 -----------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~ 378 (417)
T d1pv7a_ 310 -----------TSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGF 378 (417)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCH
T ss_pred -----------cccchhhHHHHHHHHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
Confidence 13355666778889999999999999999999999999999974 567889999999888877654 44
Q ss_pred hHHHHHHHHHHHHHHHHHhhheeeeccccc
Q psy1432 797 AGEFFLYACLIFLDMLLFYRITKRYKFVKM 826 (850)
Q Consensus 797 ~~~f~l~a~l~~l~~l~~~~~~~~~~~~~~ 826 (850)
...|++.+++.++..++.++..|+.+....
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 408 (417)
T d1pv7a_ 379 QGAYLVLGLVALGFTLISVFTLSGPGPLSL 408 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCSSCTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCccch
Confidence 567888888888888888777766554443
No 3
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=99.34 E-value=1.6e-11 Score=128.37 Aligned_cols=179 Identities=13% Similarity=0.072 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCccceeeeecccchh
Q psy1432 239 KSIYLILTIEFCERFSFCGLRTMLSLYLRDVLKFSEKDATVLYHIFYALCYFVPIIGAILADSFYGRYRTIRVFSFDATV 318 (850)
Q Consensus 239 r~i~~i~~~~~~~~~~~y~~~t~L~~YLt~~LGls~~~a~~i~~i~~i~~~~~~~lgG~LADr~lGr~k~l~~~~~~~~~ 318 (850)
+.++......++.....+++..+++.|+.+.+|++..+.+....+..+...++.+++|+++||+ +
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~-------------- 313 (447)
T d1pw4a_ 249 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-F-------------- 313 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-S--------------
T ss_pred chHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhhc-c--------------
Confidence 5677777788888899999999999999999999999999999999999999999999999998 7
Q ss_pred hhhhhhhhcccccccccccccccccceehhhHHHHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHhhchhhHHHH
Q psy1432 319 LYHIFYALCYFVPIIGAILADSFYGRYRTIRVFSFVYVLGNILLCLGAVPTLALPTIKTTLLGLIFIGIGTGGIKPCVAA 398 (850)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~Rr~vili~~i~~~lg~ll~al~a~p~l~~~~~~lliialil~glG~g~~~~~~~a 398 (850)
|++......+...+..+... ........+....++..++.+++.++..+...+
T Consensus 314 -------------------------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 366 (447)
T d1pw4a_ 314 -------------------------RGNRGATGVFFMTLVTIATI--VYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGL 366 (447)
T ss_dssp -------------------------TTCHHHHHHHHHHHHHHHHH--HTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred -------------------------ccccccccchhHHHHHHHHH--HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322222221111111111 122222334466666777778887777888899
Q ss_pred HHHhhcCCCcccchhhhHHHHHHHHHHHH-HHHHHHHHHHHHhhcCCCCCCccchHHHHHHHHHHHHHHHHHH
Q psy1432 399 LCGEQFCVPEQRFYLERFFSVYYFIINIG-GFLGMIFIPMIRKSIPCYGGESCYALGFVVPAVLMVLALVMFV 470 (850)
Q Consensus 399 l~ae~fp~p~~~~~r~s~~~~~~~~~~iG-g~iap~I~~~I~~~~g~~g~~~~w~~~f~I~a~l~lvalv~~~ 470 (850)
+..|.+| ++.|+++.++.+...+++ ..++|.+.+++.+..| |+..|++.+++.+++.+.+.
T Consensus 367 ~~~~~~p----~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g-------~~~~~~~~~~~~~~~~~~~~ 428 (447)
T d1pw4a_ 367 HALELAP----KKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-------WDGGFMVMIGGSILAVILLI 428 (447)
T ss_dssp HHHHTSC----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC-------SHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------hHHHHHHHHHHHHHHHHHHH
Confidence 9999998 788999999999888775 4568999999998843 88888877666655554433
No 4
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}
Probab=99.15 E-value=1.7e-10 Score=116.51 Aligned_cols=145 Identities=8% Similarity=0.025 Sum_probs=114.2
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCccceeeeecccchhhhhhhhhhcccccccccccccccccceehhh
Q psy1432 270 LKFSEKDATVLYHIFYALCYFVPIIGAILADSFYGRYRTIRVFSFDATVLYHIFYALCYFVPIIGAILADSFYGRYRTIR 349 (850)
Q Consensus 270 LGls~~~a~~i~~i~~i~~~~~~~lgG~LADr~lGr~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rr~vil 349 (850)
.+.+....+.......++..++..+.|+++||+ | |++++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~-~---------------------------------------~~~~~~ 293 (417)
T d1pv7a_ 254 GEQGTRVFGYVTTMGELLNASIMFFAPLIINRI-G---------------------------------------GKNALL 293 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHH-C---------------------------------------HHHHHH
T ss_pred cccchhhhcccccccccccccchhhhhhhhccc-c---------------------------------------cccchh
Confidence 345566677777888888888999999999999 8 888888
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHhhchhhHHHHHHHhhcCCCcccchhhhHHHHHH-HHHHHHH
Q psy1432 350 VFSFVYVLGNILLCLGAVPTLALPTIKTTLLGLIFIGIGTGGIKPCVAALCGEQFCVPEQRFYLERFFSVYY-FIINIGG 428 (850)
Q Consensus 350 i~~i~~~lg~ll~al~a~p~l~~~~~~lliialil~glG~g~~~~~~~al~ae~fp~p~~~~~r~s~~~~~~-~~~~iGg 428 (850)
++.++..++.++..+. ++...+++..++.+++.+...+...++..|.+| ++.|+++.+..+ ....+|+
T Consensus 294 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~ 362 (417)
T d1pv7a_ 294 LAGTIMSVRIIGSSFA-------TSALEVVILKTLHMFEVPFLLVGCFKYITSQFE----VRFSATIYLVCFCFFKQLAM 362 (417)
T ss_dssp HHHHHHHHHHHHHHTC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC----GGGHHHHHHHHHTTTHHHHH
T ss_pred hhHHHHHHhhhccccc-------cccchhhHHHHHHHHHHHHHHHHHHHHHHHHCC----HhHHHHHHHHHHHHHHHHHH
Confidence 8777666655555443 455777777888889999999999999999998 788999999754 5667999
Q ss_pred HHHHHHHHHHHhhcCCCCCCccchHHHHHHHHHHHHHHHHHHHh
Q psy1432 429 FLGMIFIPMIRKSIPCYGGESCYALGFVVPAVLMVLALVMFVVG 472 (850)
Q Consensus 429 ~iap~I~~~I~~~~g~~g~~~~w~~~f~I~a~l~lvalv~~~~~ 472 (850)
.++|.++|++.+..| |+..|++.+++.+++.+...+.
T Consensus 363 ~i~~~~~G~l~~~~g-------~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T d1pv7a_ 363 IFMSVLAGNMYESIG-------FQGAYLVLGLVALGFTLISVFT 399 (417)
T ss_dssp HHHHHHHHHHHHHHC-------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC-------HHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999854 8888888777666655554443
No 5
>d1emxa_ g.3.6.2 (A:) Heteropdatoxin 2, hptx2 {Giant crab spider (Heteropoda venatoria) [TaxId: 152925]}
Probab=7.93 E-value=69 Score=21.16 Aligned_cols=18 Identities=39% Similarity=1.056 Sum_probs=13.4
Q ss_pred CCcccccc--ccccccccce
Q psy1432 100 RDCGTIFF--DKKEDCAKTF 117 (850)
Q Consensus 100 ~~~~~~~~--~~~~~~~~~~ 117 (850)
.|||+.|- |...||-..|
T Consensus 1 ddcg~lfsgc~t~adcceg~ 20 (30)
T d1emxa_ 1 DDCGKLFSGCDTNADCCEGY 20 (30)
T ss_dssp CCCCCTTCTTCSTTCCCTTB
T ss_pred CccccccccCCCCcchhhhh
Confidence 48999884 6777887665
No 6
>d1dcea2 b.7.4.1 (A:242-350) Rab geranylgeranyltransferase alpha-subunit, insert domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=4.98 E-value=91 Score=26.59 Aligned_cols=10 Identities=60% Similarity=1.242 Sum_probs=8.9
Q ss_pred eeeecCCCCc
Q psy1432 19 FVSWRTPSGE 28 (850)
Q Consensus 19 ~~~~~~~~~~ 28 (850)
+|.||||.|.
T Consensus 43 ~veWRtp~gr 52 (109)
T d1dcea2 43 SVEWRTPDGR 52 (109)
T ss_dssp CCCCBCTTSS
T ss_pred EEEEeCCCCc
Confidence 6899999986
No 7
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.22 E-value=1.1e+02 Score=25.45 Aligned_cols=29 Identities=28% Similarity=0.356 Sum_probs=23.4
Q ss_pred ecCCCCeEEEEEeecccccc-ccccccccc
Q psy1432 121 SQPNTDAVVIMSIQNKKLDI-NFYQESFLP 149 (850)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 149 (850)
.|-..|+.|+.+|.+...+. |+|.|++.+
T Consensus 10 ~qGPpDgTIvV~i~~~s~e~~~~FDe~l~~ 39 (95)
T d1ufwa_ 10 FQGPLDATVVVNLQSPTLEEKNEFPEDLRT 39 (95)
T ss_dssp CCCCTTCEEEEEESSCCHHHHHSCCHHHHH
T ss_pred ccCCCCcEEEEEeccCCccccccCCHHHHH
Confidence 46678999999999987777 588888754
No 8
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.95 E-value=1.1e+02 Score=19.82 Aligned_cols=9 Identities=33% Similarity=0.826 Sum_probs=6.2
Q ss_pred cccccceEe
Q psy1432 111 EDCAKTFTI 119 (850)
Q Consensus 111 ~~~~~~~~~ 119 (850)
++|.|+|+-
T Consensus 6 ~eCgK~F~~ 14 (26)
T d1x6ea2 6 LECGKAFSQ 14 (26)
T ss_dssp SSSCCEESS
T ss_pred CCCcCeecc
Confidence 568888753
No 9
>d1y7ua1 d.38.1.1 (A:8-171) Acyl-coa hydrolase BC2038 {Bacillus cereus [TaxId: 1396]}
Probab=3.92 E-value=2.3e+02 Score=24.90 Aligned_cols=34 Identities=26% Similarity=0.447 Sum_probs=25.0
Q ss_pred ceeEEEecccccccccccCCeeee-eeecccceeeccc
Q psy1432 61 PCVVSVVNDITYLDEMESGDILTY-ANVTQGNYTFNTI 97 (850)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 97 (850)
+||..-+|+|.|+--+..||+++. +.| .|+.++.
T Consensus 51 ~~vtasvd~i~F~~Pv~~Gd~l~~~a~V---~~~G~tS 85 (164)
T d1y7ua1 51 ECVTASMDWVDFLHPVRSSDCVSYESFV---IWTGRTS 85 (164)
T ss_dssp EEEEEEECCCCCCSCCCTTCEEEEEEEE---EEECSSE
T ss_pred CCceEEEeeEEEeeccCCCceEEEEEEE---eecCCce
Confidence 467667789999999999999875 444 2444443
No 10
>d1jz8a3 b.18.1.5 (A:13-219) beta-Galactosidase {Escherichia coli [TaxId: 562]}
Probab=3.64 E-value=2.3e+02 Score=25.58 Aligned_cols=42 Identities=31% Similarity=0.479 Sum_probs=24.6
Q ss_pred hhhcccccccccCCcEEEEeccceeEEEecccccccccccCCeeeeeee
Q psy1432 39 LSYQQDITPFLRKPKLVLINTLPCVVSVVNDITYLDEMESGDILTYANV 87 (850)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (850)
..+.=|||++|+.-| |+|-+.|.-..|-+|+ +++|-..|+.+
T Consensus 155 ~pf~fDiT~~l~~G~----N~L~V~V~~~~d~~~~---~~~d~~~~~GI 196 (207)
T d1jz8a3 155 LPSEFDLSAFLRAGE----NRLAVMVLRWSDGSYL---EDQDMWRMSGI 196 (207)
T ss_dssp SCEEEECTTTCCSEE----EEEEEEEESCCGGGGG---BCCSEEECCEE
T ss_pred cCEEEeChhcccCCc----eEEEEEEEeCCCCCcc---CcCcccccCCC
Confidence 345569999997654 7765544333365554 45665444433
Done!