BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14320
(253 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P21265|PUR8_CHICK Adenylosuccinate lyase OS=Gallus gallus GN=ADSL PE=2 SV=2
Length = 485
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 34/41 (82%)
Query: 7 KYISPLSTRYASKEMQHNFSDMKKFTTWRQLWIYLAEAQQS 47
+Y SPL +RYAS EM NFS+ KKF TWR+LW+YLA+A++S
Sbjct: 13 RYRSPLVSRYASAEMGFNFSERKKFGTWRRLWLYLAQAEKS 53
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 211 KYISPLSTRYASKEMQHNFSDMKKFTTWRQLWIYLAEAQQ 250
+Y SPL +RYAS EM NFS+ KKF TWR+LW+YLA+A++
Sbjct: 13 RYRSPLVSRYASAEMGFNFSERKKFGTWRRLWLYLAQAEK 52
>sp|A3KN12|PUR8_BOVIN Adenylosuccinate lyase OS=Bos taurus GN=ADSL PE=2 SV=1
Length = 490
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 5 HCKYISPLSTRYASKEMQHNFSDMKKFTTWRQLWIYLAEAQQS 47
H Y SPL++RYAS EM FSD KF TWRQLW++LAEA+Q+
Sbjct: 16 HDSYRSPLASRYASPEMCFLFSDKYKFRTWRQLWLWLAEAEQT 58
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 209 HCKYISPLSTRYASKEMQHNFSDMKKFTTWRQLWIYLAEAQQ 250
H Y SPL++RYAS EM FSD KF TWRQLW++LAEA+Q
Sbjct: 16 HDSYRSPLASRYASPEMCFLFSDKYKFRTWRQLWLWLAEAEQ 57
>sp|P54822|PUR8_MOUSE Adenylosuccinate lyase OS=Mus musculus GN=Adsl PE=2 SV=2
Length = 484
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 8 YISPLSTRYASKEMQHNFSDMKKFTTWRQLWIYLAEAQQS 47
Y SPL+ RYAS+EM FSD KF TWRQLW++LAEA+Q+
Sbjct: 13 YRSPLAARYASREMCFLFSDRYKFQTWRQLWLWLAEAEQT 52
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 31/39 (79%)
Query: 212 YISPLSTRYASKEMQHNFSDMKKFTTWRQLWIYLAEAQQ 250
Y SPL+ RYAS+EM FSD KF TWRQLW++LAEA+Q
Sbjct: 13 YRSPLAARYASREMCFLFSDRYKFQTWRQLWLWLAEAEQ 51
>sp|P30566|PUR8_HUMAN Adenylosuccinate lyase OS=Homo sapiens GN=ADSL PE=1 SV=2
Length = 484
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 8 YISPLSTRYASKEMQHNFSDMKKFTTWRQLWIYLAEAQQS 47
Y SPL++RYAS EM FSD KF TWRQLW++LAEA+Q+
Sbjct: 13 YRSPLASRYASPEMCFVFSDRYKFRTWRQLWLWLAEAEQT 52
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 31/39 (79%)
Query: 212 YISPLSTRYASKEMQHNFSDMKKFTTWRQLWIYLAEAQQ 250
Y SPL++RYAS EM FSD KF TWRQLW++LAEA+Q
Sbjct: 13 YRSPLASRYASPEMCFVFSDRYKFRTWRQLWLWLAEAEQ 51
>sp|Q8HXY5|PUR8_MACFA Adenylosuccinate lyase OS=Macaca fascicularis GN=ADSL PE=2 SV=1
Length = 484
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 8 YISPLSTRYASKEMQHNFSDMKKFTTWRQLWIYLAEAQQS 47
Y SPL++RYAS EM FSD KF TWRQLW++LAEA+Q+
Sbjct: 13 YRSPLASRYASPEMCFVFSDRYKFRTWRQLWLWLAEAEQT 52
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 31/39 (79%)
Query: 212 YISPLSTRYASKEMQHNFSDMKKFTTWRQLWIYLAEAQQ 250
Y SPL++RYAS EM FSD KF TWRQLW++LAEA+Q
Sbjct: 13 YRSPLASRYASPEMCFVFSDRYKFRTWRQLWLWLAEAEQ 51
>sp|Q05911|PUR8_YEAST Adenylosuccinate lyase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ADE13 PE=1 SV=1
Length = 482
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 8 YISPLSTRYASKEMQHNFSDMKKFTTWRQLWIYLAEAQQ 46
Y +PLS+RYASKEM FS +F+TWR+LW+ LA A++
Sbjct: 7 YTTPLSSRYASKEMSATFSLRNRFSTWRKLWLNLAIAEK 45
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 212 YISPLSTRYASKEMQHNFSDMKKFTTWRQLWIYLAEAQQ 250
Y +PLS+RYASKEM FS +F+TWR+LW+ LA A++
Sbjct: 7 YTTPLSSRYASKEMSATFSLRNRFSTWRKLWLNLAIAEK 45
>sp|O60105|PUR8_SCHPO Adenylosuccinate lyase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ade8 PE=3 SV=1
Length = 482
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 4 EHCKYISPLSTRYASKEMQHNFSDMKKFTTWRQLWIYLAEAQQ 46
++ Y +PL+ RYAS EM H FS + TWRQLW+ LA A++
Sbjct: 3 DYGSYSTPLTARYASAEMSHLFSREMRINTWRQLWLNLAIAEK 45
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 208 EHCKYISPLSTRYASKEMQHNFSDMKKFTTWRQLWIYLAEAQQ 250
++ Y +PL+ RYAS EM H FS + TWRQLW+ LA A++
Sbjct: 3 DYGSYSTPLTARYASAEMSHLFSREMRINTWRQLWLNLAIAEK 45
>sp|Q21774|PUR8_CAEEL Adenylosuccinate lyase OS=Caenorhabditis elegans GN=R06C7.5 PE=1
SV=1
Length = 478
Score = 38.9 bits (89), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 7 KYISPLSTRYA-SKEMQHNFSDMKKFTTWRQLWIYLAEAQQ 46
K+ S LSTRY + + S+ K T WRQLWI+LAEA++
Sbjct: 6 KFESVLSTRYCKNSPLVSILSETNKATLWRQLWIWLAEAEK 46
Score = 38.9 bits (89), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 211 KYISPLSTRYA-SKEMQHNFSDMKKFTTWRQLWIYLAEAQQ 250
K+ S LSTRY + + S+ K T WRQLWI+LAEA++
Sbjct: 6 KFESVLSTRYCKNSPLVSILSETNKATLWRQLWIWLAEAEK 46
>sp|Q60Q90|PUR8_CAEBR Adenylosuccinate lyase OS=Caenorhabditis briggsae GN=CBG21917
PE=3 SV=1
Length = 478
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 7 KYISPLSTRYA-SKEMQHNFSDMKKFTTWRQLWIYLAEAQQ 46
K+ S LSTRY + + S+ K T WRQLWI+L EA++
Sbjct: 6 KFESVLSTRYCKNSPLVSILSETNKATLWRQLWIWLGEAEK 46
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 211 KYISPLSTRYA-SKEMQHNFSDMKKFTTWRQLWIYLAEAQQ 250
K+ S LSTRY + + S+ K T WRQLWI+L EA++
Sbjct: 6 KFESVLSTRYCKNSPLVSILSETNKATLWRQLWIWLGEAEK 46
>sp|P63984|DPO3_STRA5 DNA polymerase III PolC-type OS=Streptococcus agalactiae serotype V
(strain ATCC BAA-611 / 2603 V/R) GN=polC PE=3 SV=1
Length = 1468
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 192 TQAVNSTTSTSSNMDHEHCKY-ISPLSTRYASKEMQHNFSDMKKFTTWRQLWIYLAEAQQ 250
TQ V T + N+ E+ ++ + PL+ R+ H+ ++ T R L+I+L EA++
Sbjct: 536 TQPVIDTLEFARNLYPEYKRHGLGPLTKRFQVALEHHHMANYDAEATGRLLFIFLKEARE 595
Query: 251 VRD 253
RD
Sbjct: 596 NRD 598
>sp|P63983|DPO3_STRA3 DNA polymerase III PolC-type OS=Streptococcus agalactiae serotype
III (strain NEM316) GN=polC PE=3 SV=1
Length = 1468
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 192 TQAVNSTTSTSSNMDHEHCKY-ISPLSTRYASKEMQHNFSDMKKFTTWRQLWIYLAEAQQ 250
TQ V T + N+ E+ ++ + PL+ R+ H+ ++ T R L+I+L EA++
Sbjct: 536 TQPVIDTLEFARNLYPEYKRHGLGPLTKRFQVALEHHHMANYDAEATGRLLFIFLKEARE 595
Query: 251 VRD 253
RD
Sbjct: 596 NRD 598
>sp|Q9Y6T7|DGKB_HUMAN Diacylglycerol kinase beta OS=Homo sapiens GN=DGKB PE=2 SV=2
Length = 804
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Query: 69 TVVDSRLGVELERQDDVGKKRSRSEEPEDCRGEEKVEVVLGGAGVDGGG-QVTPV----- 122
T+ S + V ERQ V K++S S++P + K++ VDG G QVTPV
Sbjct: 380 TLPTSGVSVPEERQSTVKKEKSGSQQPNKVIDKNKMQRA-NSVTVDGQGLQVTPVPGTHP 438
Query: 123 ----VNENEGGEADESAY 136
VN GG+ E Y
Sbjct: 439 LLVFVNPKSGGKQGERIY 456
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,537,304
Number of Sequences: 539616
Number of extensions: 4157840
Number of successful extensions: 11906
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 11829
Number of HSP's gapped (non-prelim): 111
length of query: 253
length of database: 191,569,459
effective HSP length: 115
effective length of query: 138
effective length of database: 129,513,619
effective search space: 17872879422
effective search space used: 17872879422
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)