Query psy14321
Match_columns 124
No_of_seqs 122 out of 1029
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 16:53:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14321.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14321hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eei_A Adenylosuccinate lyase; 99.6 4.8E-15 1.6E-19 124.0 9.4 84 2-87 309-392 (438)
2 2pfm_A Adenylosuccinate lyase; 99.5 2.4E-14 8.2E-19 119.7 9.7 88 2-90 320-407 (444)
3 1c3c_A Protein (adenylosuccina 99.5 1.8E-14 6.2E-19 119.8 8.8 88 2-90 308-395 (429)
4 1dof_A Adenylosuccinate lyase; 99.5 1.2E-14 4E-19 120.3 6.9 86 2-87 309-394 (403)
5 1re5_A 3-carboxy-CIS,CIS-mucon 99.5 3.7E-14 1.2E-18 118.6 7.2 87 2-90 323-409 (450)
6 3c8t_A Fumarate lyase; structu 99.5 1.1E-13 3.9E-18 115.7 8.2 88 2-91 321-408 (451)
7 1q5n_A 3-carboxy-CIS,CIS-mucon 99.4 1.3E-13 4.6E-18 115.3 7.3 87 2-90 327-413 (454)
8 1tj7_A Argininosuccinate lyase 99.4 3.9E-13 1.3E-17 112.8 8.2 85 2-89 324-408 (457)
9 2e9f_A Argininosuccinate lyase 99.4 1.1E-12 3.7E-17 110.2 7.8 85 2-89 327-411 (462)
10 1k7w_A Delta 2 crystallin; eye 99.3 2.3E-12 7.8E-17 108.4 5.9 85 2-90 330-414 (468)
11 2j91_A Adenylosuccinate lyase; 99.3 1.9E-12 6.5E-17 109.9 5.4 76 2-77 359-434 (503)
12 1yis_A Adenylosuccinate lyase; 99.2 3.4E-12 1.2E-16 107.4 3.5 75 2-76 333-407 (478)
13 2ptr_A Adenylosuccinate lyase; 99.0 5.7E-10 2E-14 93.6 6.2 80 6-89 346-425 (462)
14 3bhg_A Adenylosuccinate lyase; 99.0 1.3E-09 4.6E-14 91.3 7.7 77 6-86 349-425 (459)
15 2qga_B Adenylosuccinate lyase; 98.9 2.1E-09 7.1E-14 90.3 5.8 71 6-79 346-416 (465)
16 4hgv_A Fumarase C, fumarate hy 98.5 5.5E-08 1.9E-12 82.5 4.7 76 2-89 398-473 (495)
17 3r6q_A Aspartase; aspartate am 98.3 1E-06 3.5E-11 74.2 7.7 75 3-89 366-441 (468)
18 1jsw_A L-aspartase, L-aspartat 98.3 4.8E-07 1.6E-11 76.2 5.6 76 2-89 368-444 (478)
19 1yfm_A Fumarase, YFUM; lyase, 98.3 4.1E-07 1.4E-11 77.0 4.7 75 4-90 392-467 (488)
20 1vdk_A Fumarase C, fumarate hy 98.3 5.1E-07 1.7E-11 75.9 5.2 76 3-90 366-442 (466)
21 1fur_A Fumarase C, FUMC; hydro 98.3 1.5E-06 5.2E-11 73.0 7.6 73 5-89 368-441 (467)
22 3gtd_A Fumarase C, fumarate hy 98.3 7.5E-07 2.6E-11 75.5 5.1 75 2-88 387-461 (482)
23 3e04_A Fumarase, fumarate hydr 98.1 2E-06 6.7E-11 73.1 4.2 74 3-88 394-467 (490)
24 4adm_A Fumarase C, fumarate hy 98.0 2.8E-06 9.5E-11 72.1 4.2 72 6-89 391-463 (495)
25 3ocf_A Fumarate lyase:delta cr 97.8 9.4E-06 3.2E-10 68.6 3.5 72 6-89 389-461 (478)
26 2fel_A 3-carboxy-CIS,CIS-mucon 93.8 0.01 3.4E-07 48.1 -0.2 35 79-113 320-354 (359)
27 4eei_A Adenylosuccinate lyase; 92.0 0.053 1.8E-06 45.0 1.6 37 80-116 310-347 (438)
28 2pfm_A Adenylosuccinate lyase; 91.0 0.12 4.1E-06 42.8 2.8 36 80-115 321-357 (444)
29 1re5_A 3-carboxy-CIS,CIS-mucon 91.0 0.094 3.2E-06 43.4 2.1 36 80-115 324-360 (450)
30 1dof_A Adenylosuccinate lyase; 90.7 0.11 3.7E-06 42.5 2.2 36 80-115 310-346 (403)
31 3c8t_A Fumarate lyase; structu 90.6 0.14 4.8E-06 42.4 2.8 36 80-115 322-358 (451)
32 1c3c_A Protein (adenylosuccina 90.6 0.11 3.9E-06 42.7 2.2 36 80-115 309-345 (429)
33 2j91_A Adenylosuccinate lyase; 90.5 0.19 6.5E-06 42.4 3.6 36 81-116 361-397 (503)
34 1q5n_A 3-carboxy-CIS,CIS-mucon 90.4 0.12 4.1E-06 42.8 2.2 36 80-115 328-364 (454)
35 1yis_A Adenylosuccinate lyase; 88.5 0.26 8.9E-06 41.1 2.9 36 81-116 335-371 (478)
36 1tj7_A Argininosuccinate lyase 88.1 0.29 9.8E-06 40.7 2.9 36 80-115 325-361 (457)
37 2e9f_A Argininosuccinate lyase 87.7 0.31 1.1E-05 40.6 2.9 35 81-115 329-364 (462)
38 1k7w_A Delta 2 crystallin; eye 86.4 0.34 1.2E-05 40.4 2.5 37 81-117 332-369 (468)
39 4hgv_A Fumarase C, fumarate hy 85.6 0.51 1.7E-05 39.8 3.1 37 80-116 399-436 (495)
40 1vdk_A Fumarase C, fumarate hy 81.3 1.3 4.5E-05 36.8 3.9 35 83-117 369-405 (466)
41 3gtd_A Fumarase C, fumarate hy 80.9 1.4 4.7E-05 37.2 3.9 35 81-115 389-424 (482)
42 3r6q_A Aspartase; aspartate am 80.3 1.3 4.3E-05 37.1 3.4 35 83-117 369-405 (468)
43 3e04_A Fumarase, fumarate hydr 78.8 1.7 5.9E-05 36.7 3.8 35 81-115 395-430 (490)
44 1jsw_A L-aspartase, L-aspartat 75.9 2 7E-05 35.8 3.5 36 83-118 372-409 (478)
45 1yfm_A Fumarase, YFUM; lyase, 74.2 2.9 0.0001 35.1 4.0 37 83-119 394-432 (488)
46 3bhg_A Adenylosuccinate lyase; 73.1 2.9 9.9E-05 34.6 3.7 34 83-116 349-383 (459)
47 1fur_A Fumarase C, FUMC; hydro 72.8 2.7 9.3E-05 34.9 3.5 35 82-116 368-404 (467)
48 2qga_B Adenylosuccinate lyase; 69.8 2.9 0.0001 34.6 3.0 34 83-116 346-380 (465)
49 2ptr_A Adenylosuccinate lyase; 68.7 2.7 9.2E-05 34.8 2.5 34 83-116 346-380 (462)
50 4adm_A Fumarase C, fumarate hy 67.2 5.2 0.00018 33.7 4.0 34 84-117 392-427 (495)
51 3ocf_A Fumarate lyase:delta cr 66.2 5.4 0.00019 33.4 4.0 33 87-119 394-427 (478)
52 3r8n_M 30S ribosomal protein S 38.0 72 0.0025 21.6 5.3 54 49-109 13-67 (114)
53 3tri_A Pyrroline-5-carboxylate 30.2 1.7E+02 0.0057 21.7 6.9 56 16-71 144-209 (280)
54 2y1q_A CLPC N-domain, negative 28.6 1.3E+02 0.0043 19.8 6.1 90 20-116 46-140 (150)
55 3m00_A Aristolochene synthase; 24.2 2.2E+02 0.0074 24.1 7.0 105 2-117 426-543 (550)
56 3j20_O 30S ribosomal protein S 23.7 1.8E+02 0.0062 20.5 5.5 27 49-75 20-47 (148)
57 3iz6_M 40S ribosomal protein S 21.9 1.6E+02 0.0053 20.9 4.9 49 49-104 25-74 (152)
58 3sjr_A Uncharacterized protein 21.3 28 0.00094 25.5 0.7 30 16-45 135-164 (175)
No 1
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp}
Probab=99.58 E-value=4.8e-15 Score=123.96 Aligned_cols=84 Identities=15% Similarity=0.256 Sum_probs=73.4
Q ss_pred ccchHhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCcc
Q psy14321 2 KRLTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRL 81 (124)
Q Consensus 2 Ew~~lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~ 81 (124)
||..+|+++.++++++..+..+++||+||++||++|++.+.|+++||.++++|+++|++|++||++|.++++.|++ |.
T Consensus 309 er~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~~~a~~~a~~Lv~~g~~~~~Ah~~v~~~~~~a~~-g~- 386 (438)
T 4eei_A 309 ERFYLPDNFGIMVYALRRMKNTIDNLVVQRDIIEDRVRSTSAYLSSFYLHFLVANTPFMREDCYKIVQQVAFDLKQ-GE- 386 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHCCTTHHHHHHHHHHHHSSCCHHHHHHHHHHC--------C-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-CC-
Confidence 6889999999999999999999999999999999999999999999999999999999999999999999999999 76
Q ss_pred chhhhh
Q psy14321 82 TLSESF 87 (124)
Q Consensus 82 ~l~ea~ 87 (124)
++.|.+
T Consensus 387 ~l~e~~ 392 (438)
T 4eei_A 387 SFSKKL 392 (438)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 676763
No 2
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A*
Probab=99.53 E-value=2.4e-14 Score=119.69 Aligned_cols=88 Identities=14% Similarity=0.349 Sum_probs=82.8
Q ss_pred ccchHhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCcc
Q psy14321 2 KRLTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRL 81 (124)
Q Consensus 2 Ew~~lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~ 81 (124)
||..+|+++.++++++..+..+++||+||++||++|++.+.|+++||.++.+|+++|+|+++||++|+++++.|+++|.
T Consensus 320 ~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~s~~~~~ae~la~~L~~~gig~~~A~~iv~~~~~~a~~~g~- 398 (444)
T 2pfm_A 320 ERVILPDATIALNYMLNRFGNIVKNLTVYPENMKRNMTRTYGLIYSQRVMLTLIDKGMVREEAYDIVQPKAMEAWETQV- 398 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEECHHHHHHHHTTTTTGGGHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCcCchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHCC-
Confidence 5789999999999999999999999999999999999999999999999999999889999999999999999999887
Q ss_pred chhhhhhhH
Q psy14321 82 TLSESFLTT 90 (124)
Q Consensus 82 ~l~ea~l~~ 90 (124)
++.|.+...
T Consensus 399 ~l~e~~~~~ 407 (444)
T 2pfm_A 399 QFKELVEAD 407 (444)
T ss_dssp CHHHHHHTC
T ss_pred CHHHHHhcc
Confidence 777875554
No 3
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A
Probab=99.53 E-value=1.8e-14 Score=119.80 Aligned_cols=88 Identities=14% Similarity=0.283 Sum_probs=82.8
Q ss_pred ccchHhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCcc
Q psy14321 2 KRLTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRL 81 (124)
Q Consensus 2 Ew~~lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~ 81 (124)
||..+|+++.++++++..+..+++||+||++||++|++.+.|+++||.++.+|+++|+|+++||++|+++++.|+++|.
T Consensus 308 ~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~s~~~~~a~~la~~L~~~gig~~~A~~iv~~~~~~a~~~g~- 386 (429)
T 1c3c_A 308 ERYVFPDATQTLYYMIVTATNVVRNMKVNEERMKKNIDLTKGLVFSQRVLLKLIEKGLTRKEAYDIVQRNALKTWNSEK- 386 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHTTTTTGGGHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCcCeeCHHHHHHHHHhccChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCC-
Confidence 5788999999999999999999999999999999999999999999999999999889999999999999999999887
Q ss_pred chhhhhhhH
Q psy14321 82 TLSESFLTT 90 (124)
Q Consensus 82 ~l~ea~l~~ 90 (124)
++.|.+...
T Consensus 387 ~l~e~~~~~ 395 (429)
T 1c3c_A 387 HFLEYLLED 395 (429)
T ss_dssp CHHHHHHTC
T ss_pred CHHHHHhCC
Confidence 777876555
No 4
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1
Probab=99.52 E-value=1.2e-14 Score=120.27 Aligned_cols=86 Identities=21% Similarity=0.351 Sum_probs=80.8
Q ss_pred ccchHhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCcc
Q psy14321 2 KRLTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRL 81 (124)
Q Consensus 2 Ew~~lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~ 81 (124)
||..+|+++.+++.++..+..+++||+||++||++|++.+.|+++||.++.+|+++|+|+++||++|+++++.|+++|+.
T Consensus 309 ~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~s~~~~~a~~l~~~L~~~gig~~~A~~iv~~~~~~a~~~g~~ 388 (403)
T 1dof_A 309 ERVWIPEALLALDEILTSALRVLKNVYIDEERITENLQKALPYILTEFHMNRMIKEGASRAEAYKKAKEVKALTFEYQKW 388 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHHHHHHCHHHHHHHHHHTTCCHHHHHHHHTTCCCCCCGGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHHhccCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCc
Confidence 57889999999999999999999999999999999999999999999999999998899999999999999999999864
Q ss_pred chhhhh
Q psy14321 82 TLSESF 87 (124)
Q Consensus 82 ~l~ea~ 87 (124)
++.|.+
T Consensus 389 ~l~e~~ 394 (403)
T 1dof_A 389 PVERLI 394 (403)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 676763
No 5
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1
Probab=99.49 E-value=3.7e-14 Score=118.58 Aligned_cols=87 Identities=16% Similarity=0.185 Sum_probs=82.4
Q ss_pred ccchHhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCcc
Q psy14321 2 KRLTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRL 81 (124)
Q Consensus 2 Ew~~lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~ 81 (124)
+|..+|+++.++++++..+..+++||+||++||++|++.+.|+++||.++.+|++ |+||++||++|.++++.|+++|.
T Consensus 323 ~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~s~~~~~Ae~l~~~L~~-gig~~~A~~~v~~~~~~a~~~g~- 400 (450)
T 1re5_A 323 EWETLPDICCLVSGALRQAQVIAEGMEVDAARMRRNLDLTQGLVLAEAVSIVLAQ-RLGRDRAHHLLEQCCQRAVAEQR- 400 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHTTSTTGGGHHHHHHHHHH-HSCHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHHHhCcChhHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhCC-
Confidence 6889999999999999999999999999999999999999999999999999999 99999999999999999999887
Q ss_pred chhhhhhhH
Q psy14321 82 TLSESFLTT 90 (124)
Q Consensus 82 ~l~ea~l~~ 90 (124)
++.|.++..
T Consensus 401 ~l~e~~~~~ 409 (450)
T 1re5_A 401 HLRAVLGDE 409 (450)
T ss_dssp CHHHHHHTC
T ss_pred CHHHHHHhC
Confidence 777876655
No 6
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP}
Probab=99.46 E-value=1.1e-13 Score=115.72 Aligned_cols=88 Identities=19% Similarity=0.323 Sum_probs=82.3
Q ss_pred ccchHhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCcc
Q psy14321 2 KRLTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRL 81 (124)
Q Consensus 2 Ew~~lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~ 81 (124)
||..+|+++.++++++..+..+++||+||++||++|++.+.|+++||.++.+|+++ +|+++||++|+++++.|+++|.
T Consensus 321 ~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~s~~~~~ae~l~~~L~~~-ig~~~A~~iv~~~~~~a~~~g~- 398 (451)
T 3c8t_A 321 EWSAVPEGFAVASGILYQAEFMLGGLQVFPDRMRENLDHSRGLIVAEAVMMALAPH-TGRKEAHDIVYLGCRRAVEDKT- 398 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCEECHHHHHHHHTTTTTGGGHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHHHhccChHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHhCC-
Confidence 57889999999999999999999999999999999999999999999999999996 9999999999999999999887
Q ss_pred chhhhhhhHH
Q psy14321 82 TLSESFLTTD 91 (124)
Q Consensus 82 ~l~ea~l~~~ 91 (124)
++.|.++...
T Consensus 399 ~l~e~~~~~~ 408 (451)
T 3c8t_A 399 GLFEVLRTMP 408 (451)
T ss_dssp CHHHHHTTCH
T ss_pred CHHHHHhcCh
Confidence 7778766653
No 7
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1
Probab=99.44 E-value=1.3e-13 Score=115.28 Aligned_cols=87 Identities=21% Similarity=0.295 Sum_probs=81.7
Q ss_pred ccchHhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCcc
Q psy14321 2 KRLTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRL 81 (124)
Q Consensus 2 Ew~~lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~ 81 (124)
||..+|+++.+++.++..+..+++||+||++||++|++.+.|+++||.++.+|+++ +|+++||++|+++++.|+++|.
T Consensus 327 ~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~s~~~~~ae~l~~~L~~~-ig~~~A~~iv~~~~~~a~~~g~- 404 (454)
T 1q5n_A 327 EWLSLPEIFQLTAGALERTLDVLKGMEVNAENMHQNIECTHGLIMAEAVMMALAPH-MGRLNAHHVVEAACKTAVAEQK- 404 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHTTTTGGGHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHHhCcChhHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHhCC-
Confidence 57889999999999999999999999999999999999999999999999999996 9999999999999999999887
Q ss_pred chhhhhhhH
Q psy14321 82 TLSESFLTT 90 (124)
Q Consensus 82 ~l~ea~l~~ 90 (124)
++.|.++..
T Consensus 405 ~l~e~~~~~ 413 (454)
T 1q5n_A 405 HLKDIISQV 413 (454)
T ss_dssp CHHHHHTTC
T ss_pred CHHHHHhcc
Confidence 777876655
No 8
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1
Probab=99.41 E-value=3.9e-13 Score=112.81 Aligned_cols=85 Identities=16% Similarity=0.104 Sum_probs=78.3
Q ss_pred ccchHhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCcc
Q psy14321 2 KRLTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRL 81 (124)
Q Consensus 2 Ew~~lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~ 81 (124)
||..+|+++.+++.++..+..+++||+||++||++|++ +|+++++.++..|+++|+||++||+++.++++.|+++|+
T Consensus 324 ~~~~l~~s~~~~~~~l~~~~~~l~gl~vn~~~m~~~l~--~~~~~at~l~~~Lv~~G~~~r~Ay~~v~~~~~~a~~~g~- 400 (457)
T 1tj7_A 324 DKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQ--QGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGK- 400 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHT--STTTTHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHh--cCCchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHCc-
Confidence 57789999999999999999999999999999999994 899999999999999999999999999999999998887
Q ss_pred chhhhhhh
Q psy14321 82 TLSESFLT 89 (124)
Q Consensus 82 ~l~ea~l~ 89 (124)
++.|.++.
T Consensus 401 ~l~e~~~~ 408 (457)
T 1tj7_A 401 PLEDLPLS 408 (457)
T ss_dssp CGGGSCHH
T ss_pred CHHHHHHH
Confidence 56676443
No 9
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus}
Probab=99.36 E-value=1.1e-12 Score=110.23 Aligned_cols=85 Identities=16% Similarity=0.149 Sum_probs=78.5
Q ss_pred ccchHhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCcc
Q psy14321 2 KRLTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRL 81 (124)
Q Consensus 2 Ew~~lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~ 81 (124)
+|..+|+++.+++.++..+..+++||+||++||++|++ +|+++++.++..|+++|+||++||+++.++++.|+++|+
T Consensus 327 ~~~~l~~s~~~~~~~l~~~~~~l~gl~vn~e~m~~~l~--~~~~~at~l~~~Lv~~G~~~r~ay~~v~~~~~~a~~~g~- 403 (462)
T 2e9f_A 327 DKEPLLDALATYRDSLRLLAALLPGLKWRRERMWRAAE--GGYTLATELADYLAEKGLPFREAHHVVGRLVRRLVEEGR- 403 (462)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHGGGCEECHHHHHHHHS--CSSTTHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHTTC-
T ss_pred hHhHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHHh--cCccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHCc-
Confidence 46779999999999999999999999999999999998 799999999999999999999999999999999999887
Q ss_pred chhhhhhh
Q psy14321 82 TLSESFLT 89 (124)
Q Consensus 82 ~l~ea~l~ 89 (124)
++.|.++.
T Consensus 404 ~l~e~~~~ 411 (462)
T 2e9f_A 404 ALKDLTLE 411 (462)
T ss_dssp CGGGCCHH
T ss_pred CHHHHHHH
Confidence 66676443
No 10
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A
Probab=99.29 E-value=2.3e-12 Score=108.40 Aligned_cols=85 Identities=13% Similarity=0.144 Sum_probs=77.2
Q ss_pred ccchHhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCcc
Q psy14321 2 KRLTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRL 81 (124)
Q Consensus 2 Ew~~lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~ 81 (124)
+|..+|+++.+++.++..+..+++||+||++||++|++ +| ++++.++..|+++|+||++||+++.++++.|+++|+
T Consensus 330 ~~~~l~~s~~~~~~~l~~~~~~l~gl~vn~e~m~~~l~--~~-~~at~l~~~Lv~~G~~~r~ay~~v~~~~~~a~~~g~- 405 (468)
T 1k7w_A 330 DKEAVFDVVDTLTAVLQVATGVISTLQISKENMEKALT--PE-MLATDLALYLVRKGVPFRQAHTASGKAVHLAETKGI- 405 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHTCC--GG-GGHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHTTTC-
T ss_pred hHhHHHHHHHHHHHHHHHHHHHhCCCEECHHHHHHHhh--CC-ChHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCC-
Confidence 35679999999999999999999999999999999998 55 999999999999999999999999999999999887
Q ss_pred chhhhhhhH
Q psy14321 82 TLSESFLTT 90 (124)
Q Consensus 82 ~l~ea~l~~ 90 (124)
++.|.++.+
T Consensus 406 ~l~e~~~~~ 414 (468)
T 1k7w_A 406 TINKLSLED 414 (468)
T ss_dssp CGGGCCHHH
T ss_pred ChHHHHHHH
Confidence 676764433
No 11
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A*
Probab=99.29 E-value=1.9e-12 Score=109.86 Aligned_cols=76 Identities=68% Similarity=0.986 Sum_probs=70.6
Q ss_pred ccchHhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCcccc
Q psy14321 2 KRLTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFP 77 (124)
Q Consensus 2 Ew~~lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~ 77 (124)
+|..+|+++.++++++..+..+++||+||++||++|++.+.|++.||.+++.|.++|++|++||++|++.++++.+
T Consensus 359 ~~~~l~~~~~~~~~~l~~~~~~l~gL~vn~erm~~~l~~s~~~~ate~v~~~lv~~G~~~~~Ah~~v~~~a~~~g~ 434 (503)
T 2j91_A 359 RRICLAEAFLTADTILNTLQNISEGLVVYPKVIERRIRQELPFMATENIIMAMVKAGGSRQDCHEKIRVLSQQAAS 434 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCEECHHHHHHHHHHHHHHHSHHHHHHHHC--CCCHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccChHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHhhh
Confidence 6789999999999999999999999999999999999999999999999999999899999999999999987744
No 12
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans}
Probab=99.23 E-value=3.4e-12 Score=107.44 Aligned_cols=75 Identities=32% Similarity=0.551 Sum_probs=51.4
Q ss_pred ccchHhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccc
Q psy14321 2 KRLTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLF 76 (124)
Q Consensus 2 Ew~~lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~ 76 (124)
+|..+|+++.++++++..+..+++||+||++||++|++.+.|++.+|.+++.|.++|++|++||++|+++++++.
T Consensus 333 ~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~~~~~~~te~v~~~l~~~G~~~~~Ah~~v~~~a~~~~ 407 (478)
T 1yis_A 333 RRMLIPDVLLTAEALLTTLQNIFEGLSVQTDNVKKIVEDEIAFLGLEKAMMMLTEEGVDRQQAHAVIRKTALEAK 407 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHHHHHHHHHHHHHHC----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhCCChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999989999999999999998775
No 13
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A
Probab=98.97 E-value=5.7e-10 Score=93.58 Aligned_cols=80 Identities=11% Similarity=-0.020 Sum_probs=67.5
Q ss_pred HhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCccchhh
Q psy14321 6 LSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRLTLSE 85 (124)
Q Consensus 6 lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~~l~e 85 (124)
+++++..+..++..+..+++||+||++||++|++.+.| +.+|.++++|.+ .|+++||++|+++++.+..+++ ++.|
T Consensus 346 l~~~~~~~~~~l~~~~~~l~gl~vn~e~m~~~l~~~~~-~~te~~~~~l~~--~G~~~A~~iv~~~~~~~~~~~~-~l~e 421 (462)
T 2ptr_A 346 LGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDHNWE-VLAEPIQTVMRR--YGIEKPYEKLKELTRGKRVDAE-GMKQ 421 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHTTCGG-GGHHHHHHHHHH--TTCSSHHHHHHHC-----CCHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHHcCCc-hHHHHHHHHHHh--hChHHHHHHHHHHHHHHHHcCC-CHHH
Confidence 78999999999999999999999999999999999999 569999999998 3899999999999998877776 7767
Q ss_pred hhhh
Q psy14321 86 SFLT 89 (124)
Q Consensus 86 a~l~ 89 (124)
.+..
T Consensus 422 ~~~~ 425 (462)
T 2ptr_A 422 FIDG 425 (462)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 6543
No 14
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp}
Probab=98.95 E-value=1.3e-09 Score=91.28 Aligned_cols=77 Identities=12% Similarity=0.124 Sum_probs=65.9
Q ss_pred HhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCccchhh
Q psy14321 6 LSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRLTLSE 85 (124)
Q Consensus 6 lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~~l~e 85 (124)
+++++..+..++..+..+++||+||++||++|++.+.|+ .||.++.+|+++ |+++||++|+++++....++. ++.|
T Consensus 349 l~~~~~~~~~~l~~~~~~l~gl~vn~e~m~~~l~~~~~~-~te~~~~~L~~~--G~~~A~~iv~~~~~~~~~~~~-~l~~ 424 (459)
T 3bhg_A 349 LGVAFSYSLIAYHSVAKGNDKLQINKSALQKDLSENWEV-LAEAIQTVMRRY--NEPNAYEQLKELTRGQMIDAE-NLKK 424 (459)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEEECHHHHHHHHHTCGGG-GHHHHHHHHHHT--TCTTHHHHHHHHHTTSCCCHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHHcCCch-HHHHHHHHHHHh--ChHHHHHHHHHHHhhcccccc-cHHH
Confidence 789999999999999999999999999999999999995 599999999983 899999999999994323332 4545
Q ss_pred h
Q psy14321 86 S 86 (124)
Q Consensus 86 a 86 (124)
.
T Consensus 425 ~ 425 (459)
T 3bhg_A 425 F 425 (459)
T ss_dssp H
T ss_pred H
Confidence 4
No 15
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A
Probab=98.87 E-value=2.1e-09 Score=90.28 Aligned_cols=71 Identities=10% Similarity=0.101 Sum_probs=63.4
Q ss_pred HhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCC
Q psy14321 6 LSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHR 79 (124)
Q Consensus 6 lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~ 79 (124)
+++++..+..++..+..+++||+||++||++|++.+.|++ ||+++.+|+++ |+++||++|+++++.+...+
T Consensus 346 l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~~-ae~v~~~L~~~--G~~~A~~iv~~~~~~~~~~~ 416 (465)
T 2qga_B 346 IGSSLAYCLIAYKSVLKGLNKIDIDRRNLEEELNQNWSTL-AEPIQIVMKRH--NYVDAYEELKQFTRGKVIDQ 416 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHTCGGGG-HHHHHHHHHHT--TCSCHHHHHHHHHTTSCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHcCCChH-HHHHHHHHHHh--ChHHHHHHHHHHHhhhhhcc
Confidence 6889999999999999999999999999999999999954 99999999984 88999999999998544443
No 16
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti}
Probab=98.54 E-value=5.5e-08 Score=82.53 Aligned_cols=76 Identities=16% Similarity=0.119 Sum_probs=64.2
Q ss_pred ccchHhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCcc
Q psy14321 2 KRLTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRL 81 (124)
Q Consensus 2 Ew~~lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~ 81 (124)
+|..+|+++.++++++..+..+++||+||++||++|++.+.+++ .+|++ .+|++.||+++++ |+++|+
T Consensus 398 ~~~ll~s~~~l~~~~~~~~~~~i~gl~vn~erm~~~l~~s~~lv------taL~~-~iGy~~A~~iak~----A~~~g~- 465 (495)
T 4hgv_A 398 AYNFLQSVQLLADAAISFTDNCVVGIEAREDNIKAALDRSLMLV------TALAP-KIGYDNAAKIAKT----AHKNGT- 465 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCSGGG------GGTHH-HHCHHHHHHHHHH----HHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCEECHHHHHHHHhcChhHH------HHhhH-HHHHHHHHHHHHH----HHHhCC-
Confidence 68899999999999999999999999999999999999988765 46888 5899999988775 455676
Q ss_pred chhhhhhh
Q psy14321 82 TLSESFLT 89 (124)
Q Consensus 82 ~l~ea~l~ 89 (124)
++.|+++.
T Consensus 466 ~lre~~~~ 473 (495)
T 4hgv_A 466 TLREEAVG 473 (495)
T ss_dssp CHHHHHHT
T ss_pred CHHHHHHH
Confidence 66676443
No 17
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A
Probab=98.34 E-value=1e-06 Score=74.24 Aligned_cols=75 Identities=9% Similarity=0.169 Sum_probs=61.1
Q ss_pred cchHhHHHHHHHHHHHHHH-hhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCcc
Q psy14321 3 RLTLSESFLTTDCLLITLQ-NVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRL 81 (124)
Q Consensus 3 w~~lPe~~~~~~~aL~~~~-~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~ 81 (124)
|..+++++.++..++..+. .+++||+||++||++|++.+.|++ .+|++ .+|++.|+++ ++.|+++|+
T Consensus 366 ~~~l~~s~~~l~~~l~~~~~~~i~gl~vn~erm~~~l~~s~~l~------t~La~-~lgy~~a~~i----a~~a~~~g~- 433 (468)
T 3r6q_A 366 FFNLIQSISIMTNVFKSFTENCLKGIKANEERMKEYVEKSIGII------TAINP-HVGYETAAKL----AREAYLTGE- 433 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHTCSTTH------HHHHH-HHHHHHHHHH----HHHHHHTCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHcCCchH------Hhcch-hhHHHHHHHH----HHHHHHhCC-
Confidence 3457899999999999999 999999999999999999999997 37888 4766666654 566777887
Q ss_pred chhhhhhh
Q psy14321 82 TLSESFLT 89 (124)
Q Consensus 82 ~l~ea~l~ 89 (124)
++.|.++.
T Consensus 434 ~l~e~~~~ 441 (468)
T 3r6q_A 434 SIRELCIK 441 (468)
T ss_dssp CSHHHHHH
T ss_pred CHHHHHHH
Confidence 66676443
No 18
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1
Probab=98.34 E-value=4.8e-07 Score=76.21 Aligned_cols=76 Identities=9% Similarity=-0.005 Sum_probs=62.9
Q ss_pred ccchHhHHHHHHHHHHHHHH-hhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCc
Q psy14321 2 KRLTLSESFLTTDCLLITLQ-NVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRR 80 (124)
Q Consensus 2 Ew~~lPe~~~~~~~aL~~~~-~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~ 80 (124)
+|..+++++.++..++..+. ++++||+||++||++|++.+.|++ .+|++ .+|++.|+++++ .|+++|+
T Consensus 368 ~~~~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~~~~l~------t~La~-~lg~~~a~~~v~----~a~~~g~ 436 (478)
T 1jsw_A 368 IGQAMFESVHILTNACYNLLEKCINGITANKEVCEGYVYNSIGIV------TYLNP-FIGHHNGDIVGK----ICAETGK 436 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHTTCTTCG------GGTHH-HHCHHHHHHHHH----HHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCeecHHHHHHHHHhCchHH------HHHHH-hhhHHHHHHHHH----HHHHhCC
Confidence 35567899999999999997 699999999999999999999997 67777 588888888777 5566676
Q ss_pred cchhhhhhh
Q psy14321 81 LTLSESFLT 89 (124)
Q Consensus 81 ~~l~ea~l~ 89 (124)
++.|..+.
T Consensus 437 -~l~e~~~~ 444 (478)
T 1jsw_A 437 -SVREVVLE 444 (478)
T ss_dssp -CHHHHHHH
T ss_pred -CHHHHHHh
Confidence 67676444
No 19
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1
Probab=98.31 E-value=4.1e-07 Score=77.01 Aligned_cols=75 Identities=16% Similarity=0.117 Sum_probs=62.4
Q ss_pred chHhHHHHHHHHHHHHH-HhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCccc
Q psy14321 4 LTLSESFLTTDCLLITL-QNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRLT 82 (124)
Q Consensus 4 ~~lPe~~~~~~~aL~~~-~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~~ 82 (124)
..+++++.++..++..+ .++++||+||++||++|++.+.|++ .+|++ ++|++.|++++++ |+++|+ +
T Consensus 392 ~~l~~s~~~l~~~l~~~~~~~i~gl~vn~erm~~~l~~s~~l~------t~La~-~lg~~~a~~i~~~----a~~~g~-~ 459 (488)
T 1yfm_A 392 ANLLNSIRLITDAAYSFRVHCVEGIKANEPRIHELLTKSLMLV------TALNP-KIGYDAASKVAKN----AHKKGI-T 459 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCSGGG------TTTGG-GTCHHHHHHHHHH----HHHHTC-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHccCchHH------HHHHH-hccHHHHHHHHHH----HHHhCC-C
Confidence 46789999999999999 5699999999999999999999997 67888 6998888888774 566676 6
Q ss_pred hhhhhhhH
Q psy14321 83 LSESFLTT 90 (124)
Q Consensus 83 l~ea~l~~ 90 (124)
+.|+++..
T Consensus 460 l~e~~~~~ 467 (488)
T 1yfm_A 460 LKESALEL 467 (488)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 76765443
No 20
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1
Probab=98.31 E-value=5.1e-07 Score=75.87 Aligned_cols=76 Identities=13% Similarity=0.123 Sum_probs=60.1
Q ss_pred cchHhHHHHHHHHHHHHH-HhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCcc
Q psy14321 3 RLTLSESFLTTDCLLITL-QNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRL 81 (124)
Q Consensus 3 w~~lPe~~~~~~~aL~~~-~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~ 81 (124)
|..+++++.++..++..+ .++++||+||++||++|++.+.|++ .+|++ .+|++.|+++ +..|+++|+
T Consensus 366 ~~~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~~~~l~------t~La~-~lg~~~a~~~----v~~a~~~g~- 433 (466)
T 1vdk_A 366 AYSTLESINLLADAVASFDAHLAQGIEPNLERIEEYLQKNPMLA------TALNK-AIGYDKAAEI----VKKALKEKK- 433 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHTTCGGGG------HHHHH-HHCSHHHHTT----TTTSCC--C-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCEEcHHHHHHHHHhcchHH------HHHHH-hccHHHHHHH----HHHHHHcCC-
Confidence 456789999999999999 5699999999999999999999997 67888 5886665555 556777777
Q ss_pred chhhhhhhH
Q psy14321 82 TLSESFLTT 90 (124)
Q Consensus 82 ~l~ea~l~~ 90 (124)
++.|+++..
T Consensus 434 ~l~e~~~~~ 442 (466)
T 1vdk_A 434 TLKQAALEL 442 (466)
T ss_dssp CHHHHHHHT
T ss_pred CHHHHHHhc
Confidence 676764443
No 21
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A
Probab=98.29 E-value=1.5e-06 Score=73.02 Aligned_cols=73 Identities=12% Similarity=0.079 Sum_probs=59.9
Q ss_pred hHhHHHHHHHHHHHHH-HhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCccch
Q psy14321 5 TLSESFLTTDCLLITL-QNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRLTL 83 (124)
Q Consensus 5 ~lPe~~~~~~~aL~~~-~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~~l 83 (124)
.+++++.++..++..+ .++++||+||++||++|++.+.++ +.+|++ .+|++.|++++++ |+++|+ ++
T Consensus 368 ~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~~~~l------~t~La~-~lg~~~a~~~~~~----a~~~g~-~l 435 (467)
T 1fur_A 368 NFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLML------VTALNT-HIGYDKAAEIAKK----AHKEGL-TL 435 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCSTT------HHHHHT-TSCHHHHHHHHHH----HHHHTC-CH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCeeCHHHHHHHHHhCccH------HHHhHh-hccHHHHHHHHHH----HHHcCC-CH
Confidence 4678999999999999 669999999999999999999998 468998 6998888777654 556666 66
Q ss_pred hhhhhh
Q psy14321 84 SESFLT 89 (124)
Q Consensus 84 ~ea~l~ 89 (124)
.|.+..
T Consensus 436 ~e~~~~ 441 (467)
T 1fur_A 436 KAAALA 441 (467)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 676444
No 22
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii}
Probab=98.26 E-value=7.5e-07 Score=75.48 Aligned_cols=75 Identities=15% Similarity=0.010 Sum_probs=60.5
Q ss_pred ccchHhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCcc
Q psy14321 2 KRLTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRL 81 (124)
Q Consensus 2 Ew~~lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~ 81 (124)
+|..+|+++.++++++..+..+++||+||++||++|++.+-+++ .+|++ .+|++.|++++ ++|+++|+
T Consensus 387 ~~~~l~s~~ll~~~~~~~~~~~v~gl~vn~erm~~~l~~s~~lv------TaLa~-~iGy~~a~~ia----~~A~~~g~- 454 (482)
T 3gtd_A 387 IYNILQSIELLSDSVNSFVTHCVKGLEPNIARINTLRDKSLMLV------TVLNP-HIGYDNAAKIA----KEAHKYGI- 454 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTCEECHHHHHHHHHHCGGGH------HHHHH-HHCHHHHHHHH----HHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhhhhHHH------HHhhh-HHHHHHHHHHH----HHHHHhCC-
Confidence 36689999999999999999999999999999999998655543 37888 58888877664 46677787
Q ss_pred chhhhhh
Q psy14321 82 TLSESFL 88 (124)
Q Consensus 82 ~l~ea~l 88 (124)
++.|+++
T Consensus 455 ~l~e~~~ 461 (482)
T 3gtd_A 455 TLKEAAK 461 (482)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 6767654
No 23
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens}
Probab=98.09 E-value=2e-06 Score=73.07 Aligned_cols=74 Identities=15% Similarity=0.155 Sum_probs=59.5
Q ss_pred cchHhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCccc
Q psy14321 3 RLTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRLT 82 (124)
Q Consensus 3 w~~lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~~ 82 (124)
|..+|++..++++++..+..+++||+||++||++|++.+-+++ .+|++ .+|++.|++++ ++|+++|+ +
T Consensus 394 ~~ll~s~~ll~~~~~~~~~~~v~gl~vn~erm~~~l~~s~~lv------TaLa~-~iGy~~a~~ia----k~A~~~g~-~ 461 (490)
T 3e04_A 394 KNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESLMLV------TALNP-HIGYDKAAKIA----KTAHKNGS-T 461 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCSGGG------GGGHH-HHCHHHHHHHH----HHHHHHTC-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhhchHHH------HHhhh-HHHHHHHHHHH----HHHHHHCC-C
Confidence 5588999999999999999999999999999999988666553 26777 58887776664 46677787 6
Q ss_pred hhhhhh
Q psy14321 83 LSESFL 88 (124)
Q Consensus 83 l~ea~l 88 (124)
+.|+++
T Consensus 462 l~e~~~ 467 (490)
T 3e04_A 462 LKETAI 467 (490)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 767644
No 24
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A
Probab=98.05 E-value=2.8e-06 Score=72.15 Aligned_cols=72 Identities=13% Similarity=0.197 Sum_probs=58.3
Q ss_pred HhHHHHHHHHHHHHH-HhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCccchh
Q psy14321 6 LSESFLTTDCLLITL-QNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRLTLS 84 (124)
Q Consensus 6 lPe~~~~~~~aL~~~-~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~~l~ 84 (124)
+.+.+.++..++..+ ..+++||+||++||++|++.+.|++. +|++ .+|++.||++++ .|+++|+ ++.
T Consensus 391 l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~s~~l~t------~La~-~igy~~a~~ia~----~a~~~g~-~l~ 458 (495)
T 4adm_A 391 ILESFKLLTNVSRLFAQRCIAGLTANVEHLRRLAESSPSIVT------PLNS-AIGYEEAAAVAK----QALKERK-TIR 458 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCGGGGG------GGHH-HHCHHHHHHHHH----HHHHHTC-CHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhccccHHH------Hhhh-hhhHHHHHHHHH----HHHHhCC-CHH
Confidence 567777788888887 89999999999999999999999864 6888 599988888765 5667777 666
Q ss_pred hhhhh
Q psy14321 85 ESFLT 89 (124)
Q Consensus 85 ea~l~ 89 (124)
|+++.
T Consensus 459 e~~~~ 463 (495)
T 4adm_A 459 QTVID 463 (495)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 76444
No 25
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A
Probab=97.82 E-value=9.4e-06 Score=68.63 Aligned_cols=72 Identities=11% Similarity=0.122 Sum_probs=54.4
Q ss_pred HhHHHHHHHHHHHHHH-hhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCccchh
Q psy14321 6 LSESFLTTDCLLITLQ-NVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRLTLS 84 (124)
Q Consensus 6 lPe~~~~~~~aL~~~~-~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~~l~ 84 (124)
+++.+.++..++..+. .+++||+||++||++|++.+.|++. +|++ .+|++.|+++ +++|+++|+ ++.
T Consensus 389 l~~s~~ll~~~~~~~~~~~v~gl~vn~erm~~~l~~s~~lvt------aLa~-~igy~~a~~i----a~~A~~~g~-~l~ 456 (478)
T 3ocf_A 389 ILSSMRLLGRAMTNLAERCVDGIEANVERCRAGAEESISLAT------ALVP-VVGYARAAEI----AKQALASGQ-TVM 456 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHTCGGGGG------GGHH-HHHHHHHHHH----HHHHHHHCC-CHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCEECHHHHHHHHHhCccHHH------HhhH-HHHHHHHHHH----HHHHHHhCC-CHH
Confidence 5566666666666664 5799999999999999999999884 7888 4777776655 556677787 676
Q ss_pred hhhhh
Q psy14321 85 ESFLT 89 (124)
Q Consensus 85 ea~l~ 89 (124)
|+++.
T Consensus 457 e~~~~ 461 (478)
T 3ocf_A 457 EVAIS 461 (478)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76443
No 26
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A
Probab=93.83 E-value=0.01 Score=48.13 Aligned_cols=35 Identities=14% Similarity=0.072 Sum_probs=29.0
Q ss_pred CccchhhhhhhHHHHHHHHHhhhcCCccCHHHHhh
Q psy14321 79 RRLTLSESFLTTDCLLITLQNVLKGLVVYPKVIQR 113 (124)
Q Consensus 79 ~~~~l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~ 113 (124)
++..+||+|...+.+|..+..+++||+|||++|--
T Consensus 320 e~~~lp~~~~~~~~~L~~~~~v~~~l~v~~~~m~~ 354 (359)
T 2fel_A 320 EWLTLPQMVTATGTSLLVAERLAAQIDRLGADESH 354 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHEEEECC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCEECHHHhCc
Confidence 35679999999999999999999999999999953
No 27
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp}
Probab=91.97 E-value=0.053 Score=45.00 Aligned_cols=37 Identities=24% Similarity=0.394 Sum_probs=33.1
Q ss_pred ccchhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hhh
Q psy14321 80 RLTLSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LNT 116 (124)
Q Consensus 80 ~~~l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~~ 116 (124)
|..+++++...+.++..+.++++|++|||++|++ ++.
T Consensus 310 r~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~ 347 (438)
T 4eei_A 310 RFYLPDNFGIMVYALRRMKNTIDNLVVQRDIIEDRVRS 347 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHh
Confidence 4467889999999999999999999999999999 763
No 28
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A*
Probab=91.00 E-value=0.12 Score=42.78 Aligned_cols=36 Identities=28% Similarity=0.617 Sum_probs=32.7
Q ss_pred ccchhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hh
Q psy14321 80 RLTLSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LN 115 (124)
Q Consensus 80 ~~~l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~ 115 (124)
+..+++++...+.++..+.++++|+.||+++|++ +.
T Consensus 321 ~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~ 357 (444)
T 2pfm_A 321 RVILPDATIALNYMLNRFGNIVKNLTVYPENMKRNMT 357 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEECHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHH
Confidence 3578899999999999999999999999999999 75
No 29
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1
Probab=90.99 E-value=0.094 Score=43.44 Aligned_cols=36 Identities=22% Similarity=0.206 Sum_probs=32.8
Q ss_pred ccchhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hh
Q psy14321 80 RLTLSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LN 115 (124)
Q Consensus 80 ~~~l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~ 115 (124)
+..+++++...+.++..+.++++|+.||+++|++ ++
T Consensus 324 ~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~ 360 (450)
T 1re5_A 324 WETLPDICCLVSGALRQAQVIAEGMEVDAARMRRNLD 360 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHHH
Confidence 4568888999999999999999999999999999 75
No 30
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1
Probab=90.66 E-value=0.11 Score=42.54 Aligned_cols=36 Identities=28% Similarity=0.398 Sum_probs=32.7
Q ss_pred ccchhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hh
Q psy14321 80 RLTLSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LN 115 (124)
Q Consensus 80 ~~~l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~ 115 (124)
+..+++++...+.++..+.++++|+.||+++|++ ++
T Consensus 310 ~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~ 346 (403)
T 1dof_A 310 RVWIPEALLALDEILTSALRVLKNVYIDEERITENLQ 346 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHH
Confidence 3567899999999999999999999999999999 75
No 31
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP}
Probab=90.57 E-value=0.14 Score=42.42 Aligned_cols=36 Identities=25% Similarity=0.467 Sum_probs=32.7
Q ss_pred ccchhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hh
Q psy14321 80 RLTLSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LN 115 (124)
Q Consensus 80 ~~~l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~ 115 (124)
+..+++++...+.++..+.++++|+.||+++|++ +.
T Consensus 322 ~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~ 358 (451)
T 3c8t_A 322 WSAVPEGFAVASGILYQAEFMLGGLQVFPDRMRENLD 358 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCEECHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHHH
Confidence 3567899999999999999999999999999999 75
No 32
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A
Probab=90.56 E-value=0.11 Score=42.69 Aligned_cols=36 Identities=17% Similarity=0.377 Sum_probs=32.6
Q ss_pred ccchhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hh
Q psy14321 80 RLTLSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LN 115 (124)
Q Consensus 80 ~~~l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~ 115 (124)
+..+++++...+.++..+.++++|+.||+++|++ ++
T Consensus 309 ~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~ 345 (429)
T 1c3c_A 309 RYVFPDATQTLYYMIVTATNVVRNMKVNEERMKKNID 345 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCcCeeCHHHHHHHHH
Confidence 3467899999999999999999999999999999 75
No 33
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A*
Probab=90.47 E-value=0.19 Score=42.37 Aligned_cols=36 Identities=58% Similarity=0.948 Sum_probs=32.8
Q ss_pred cchhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hhh
Q psy14321 81 LTLSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LNT 116 (124)
Q Consensus 81 ~~l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~~ 116 (124)
..++++++..+.+++.+.++++||.|||++|++ ++.
T Consensus 361 ~~l~~~~~~~~~~l~~~~~~l~gL~vn~erm~~~l~~ 397 (503)
T 2j91_A 361 ICLAEAFLTADTILNTLQNISEGLVVYPKVIERRIRQ 397 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCEECHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHh
Confidence 478899999999999999999999999999999 653
No 34
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1
Probab=90.37 E-value=0.12 Score=42.82 Aligned_cols=36 Identities=31% Similarity=0.389 Sum_probs=32.8
Q ss_pred ccchhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hh
Q psy14321 80 RLTLSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LN 115 (124)
Q Consensus 80 ~~~l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~ 115 (124)
+..+++++...+.++..+.++++|+.||+++|++ ++
T Consensus 328 ~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~ 364 (454)
T 1q5n_A 328 WLSLPEIFQLTAGALERTLDVLKGMEVNAENMHQNIE 364 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHH
Confidence 4577899999999999999999999999999999 75
No 35
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans}
Probab=88.51 E-value=0.26 Score=41.09 Aligned_cols=36 Identities=31% Similarity=0.603 Sum_probs=32.7
Q ss_pred cchhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hhh
Q psy14321 81 LTLSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LNT 116 (124)
Q Consensus 81 ~~l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~~ 116 (124)
..++++++..+.+++.+.++++|+.|||++|++ ++.
T Consensus 335 ~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~ 371 (478)
T 1yis_A 335 MLIPDVLLTAEALLTTLQNIFEGLSVQTDNVKKIVED 371 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHh
Confidence 467889999999999999999999999999999 653
No 36
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1
Probab=88.08 E-value=0.29 Score=40.72 Aligned_cols=36 Identities=22% Similarity=0.039 Sum_probs=32.5
Q ss_pred ccchhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hh
Q psy14321 80 RLTLSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LN 115 (124)
Q Consensus 80 ~~~l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~ 115 (124)
+..+++++...+..+..+..+++|+.||+++|++ +.
T Consensus 325 ~~~l~~s~~~~~~~l~~~~~~l~gl~vn~~~m~~~l~ 361 (457)
T 1tj7_A 325 KEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQ 361 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHT
T ss_pred HhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHh
Confidence 3468899999999999999999999999999998 64
No 37
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus}
Probab=87.66 E-value=0.31 Score=40.56 Aligned_cols=35 Identities=23% Similarity=0.143 Sum_probs=32.0
Q ss_pred cchhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hh
Q psy14321 81 LTLSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LN 115 (124)
Q Consensus 81 ~~l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~ 115 (124)
..+++++...+.++..+..+++|+.||+++|++ ++
T Consensus 329 ~~l~~s~~~~~~~l~~~~~~l~gl~vn~e~m~~~l~ 364 (462)
T 2e9f_A 329 EPLLDALATYRDSLRLLAALLPGLKWRRERMWRAAE 364 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGCEECHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHHh
Confidence 468899999999999999999999999999988 65
No 38
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A
Probab=86.45 E-value=0.34 Score=40.38 Aligned_cols=37 Identities=14% Similarity=0.141 Sum_probs=33.1
Q ss_pred cchhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hhhh
Q psy14321 81 LTLSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LNTL 117 (124)
Q Consensus 81 ~~l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~~~ 117 (124)
..+++++...+..+..+..+++|+.||+++|++ ++..
T Consensus 332 ~~l~~s~~~~~~~l~~~~~~l~gl~vn~e~m~~~l~~~ 369 (468)
T 1k7w_A 332 EAVFDVVDTLTAVLQVATGVISTLQISKENMEKALTPE 369 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHTCCGG
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCEECHHHHHHHhhCC
Confidence 468899999999999999999999999999998 6544
No 39
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti}
Probab=85.62 E-value=0.51 Score=39.81 Aligned_cols=37 Identities=19% Similarity=0.163 Sum_probs=31.8
Q ss_pred ccchhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hhh
Q psy14321 80 RLTLSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LNT 116 (124)
Q Consensus 80 ~~~l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~~ 116 (124)
+..+++.++..+.++....++++|+.||+++|++ ++.
T Consensus 399 ~~ll~s~~~l~~~~~~~~~~~i~gl~vn~erm~~~l~~ 436 (495)
T 4hgv_A 399 YNFLQSVQLLADAAISFTDNCVVGIEAREDNIKAALDR 436 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCEECHHHHHHHHhc
Confidence 4467778888899999999999999999999999 643
No 40
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1
Probab=81.28 E-value=1.3 Score=36.81 Aligned_cols=35 Identities=14% Similarity=0.096 Sum_probs=29.4
Q ss_pred hhhhhhhHHHHHHHH-HhhhcCCccCHHHHhh-hhhh
Q psy14321 83 LSESFLTTDCLLITL-QNVLKGLVVYPKVIQR-LNTL 117 (124)
Q Consensus 83 l~ea~l~~~~~l~~~-~~v~~~l~v~~~~m~~-~~~~ 117 (124)
+++++...+..+..+ .++++|+.||+++|++ ++..
T Consensus 369 l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~~ 405 (466)
T 1vdk_A 369 TLESINLLADAVASFDAHLAQGIEPNLERIEEYLQKN 405 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhccCEEcHHHHHHHHHhc
Confidence 458888888888888 6799999999999999 6544
No 41
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii}
Probab=80.90 E-value=1.4 Score=37.19 Aligned_cols=35 Identities=20% Similarity=0.115 Sum_probs=31.2
Q ss_pred cchhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hh
Q psy14321 81 LTLSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LN 115 (124)
Q Consensus 81 ~~l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~ 115 (124)
..+++.++..+.++....++++|+.||+++|++ ++
T Consensus 389 ~~l~s~~ll~~~~~~~~~~~v~gl~vn~erm~~~l~ 424 (482)
T 3gtd_A 389 NILQSIELLSDSVNSFVTHCVKGLEPNIARINTLRD 424 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTCEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHh
Confidence 357788899999999999999999999999999 65
No 42
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A
Probab=80.27 E-value=1.3 Score=37.10 Aligned_cols=35 Identities=17% Similarity=0.272 Sum_probs=29.8
Q ss_pred hhhhhhhHHHHHHHHH-hhhcCCccCHHHHhh-hhhh
Q psy14321 83 LSESFLTTDCLLITLQ-NVLKGLVVYPKVIQR-LNTL 117 (124)
Q Consensus 83 l~ea~l~~~~~l~~~~-~v~~~l~v~~~~m~~-~~~~ 117 (124)
+.|++...+..+..+. ++++|+.||+++|++ ++..
T Consensus 369 l~~s~~~l~~~l~~~~~~~i~gl~vn~erm~~~l~~s 405 (468)
T 3r6q_A 369 LIQSISIMTNVFKSFTENCLKGIKANEERMKEYVEKS 405 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHcC
Confidence 5588878888888898 999999999999999 6543
No 43
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens}
Probab=78.78 E-value=1.7 Score=36.67 Aligned_cols=35 Identities=20% Similarity=0.246 Sum_probs=30.9
Q ss_pred cchhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hh
Q psy14321 81 LTLSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LN 115 (124)
Q Consensus 81 ~~l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~ 115 (124)
..+++..+..+.++....++++|+.||+++|++ +.
T Consensus 395 ~ll~s~~ll~~~~~~~~~~~v~gl~vn~erm~~~l~ 430 (490)
T 3e04_A 395 NVLHSARLLGDASVSFTENCVVGIQANTERINKLMN 430 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHh
Confidence 367778888999999999999999999999999 65
No 44
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1
Probab=75.93 E-value=2 Score=35.77 Aligned_cols=36 Identities=14% Similarity=0.116 Sum_probs=29.5
Q ss_pred hhhhhhhHHHHHHHHH-hhhcCCccCHHHHhh-hhhhh
Q psy14321 83 LSESFLTTDCLLITLQ-NVLKGLVVYPKVIQR-LNTLR 118 (124)
Q Consensus 83 l~ea~l~~~~~l~~~~-~v~~~l~v~~~~m~~-~~~~~ 118 (124)
+.+++......+..+. ++++|+.||+++|++ ++...
T Consensus 372 l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~~~ 409 (478)
T 1jsw_A 372 MFESVHILTNACYNLLEKCINGITANKEVCEGYVYNSI 409 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHHccCeecHHHHHHHHHhCc
Confidence 4477788888888887 799999999999999 65443
No 45
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1
Probab=74.15 E-value=2.9 Score=35.09 Aligned_cols=37 Identities=14% Similarity=0.116 Sum_probs=28.3
Q ss_pred hhhhhhhHHHHHHHH-HhhhcCCccCHHHHhh-hhhhhh
Q psy14321 83 LSESFLTTDCLLITL-QNVLKGLVVYPKVIQR-LNTLRV 119 (124)
Q Consensus 83 l~ea~l~~~~~l~~~-~~v~~~l~v~~~~m~~-~~~~~~ 119 (124)
+.+++......+..+ .++++|+.||+++|++ ++....
T Consensus 394 l~~s~~~l~~~l~~~~~~~i~gl~vn~erm~~~l~~s~~ 432 (488)
T 1yfm_A 394 LLNSIRLITDAAYSFRVHCVEGIKANEPRIHELLTKSLM 432 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCSG
T ss_pred HHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHccCch
Confidence 346666666677777 6799999999999999 665433
No 46
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp}
Probab=73.15 E-value=2.9 Score=34.58 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=27.4
Q ss_pred hhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hhh
Q psy14321 83 LSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LNT 116 (124)
Q Consensus 83 l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~~ 116 (124)
+.+++......+..+.++++|++|||++|++ ++.
T Consensus 349 l~~~~~~~~~~l~~~~~~l~gl~vn~e~m~~~l~~ 383 (459)
T 3bhg_A 349 LGVAFSYSLIAYHSVAKGNDKLQINKSALQKDLSE 383 (459)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEEECHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHHc
Confidence 4566666677778889999999999999999 543
No 47
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A
Probab=72.78 E-value=2.7 Score=34.94 Aligned_cols=35 Identities=14% Similarity=0.113 Sum_probs=27.5
Q ss_pred chhhhhhhHHHHHHHH-HhhhcCCccCHHHHhh-hhh
Q psy14321 82 TLSESFLTTDCLLITL-QNVLKGLVVYPKVIQR-LNT 116 (124)
Q Consensus 82 ~l~ea~l~~~~~l~~~-~~v~~~l~v~~~~m~~-~~~ 116 (124)
.+.+++......+..+ .++++|+.||+++|++ ++.
T Consensus 368 ~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~ 404 (467)
T 1fur_A 368 NFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNE 404 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCeeCHHHHHHHHHh
Confidence 3456666666677777 7799999999999999 654
No 48
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A
Probab=69.84 E-value=2.9 Score=34.60 Aligned_cols=34 Identities=12% Similarity=0.110 Sum_probs=27.2
Q ss_pred hhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hhh
Q psy14321 83 LSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LNT 116 (124)
Q Consensus 83 l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~~ 116 (124)
+.+++-.....+..+.++++|++|||++|++ ++.
T Consensus 346 l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~ 380 (465)
T 2qga_B 346 IGSSLAYCLIAYKSVLKGLNKIDIDRRNLEEELNQ 380 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHc
Confidence 4566666667778888999999999999999 653
No 49
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A
Probab=68.65 E-value=2.7 Score=34.82 Aligned_cols=34 Identities=12% Similarity=-0.042 Sum_probs=27.5
Q ss_pred hhhhhhhHHHHHHHHHhhhcCCccCHHHHhh-hhh
Q psy14321 83 LSESFLTTDCLLITLQNVLKGLVVYPKVIQR-LNT 116 (124)
Q Consensus 83 l~ea~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~~ 116 (124)
+.+++......+..+.++++|+.||+++|++ ++.
T Consensus 346 l~~~~~~~~~~l~~~~~~l~gl~vn~e~m~~~l~~ 380 (462)
T 2ptr_A 346 LGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDH 380 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHHc
Confidence 4566666677778889999999999999999 543
No 50
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A
Probab=67.19 E-value=5.2 Score=33.69 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=24.0
Q ss_pred hhhhhhHHHHHHHH-HhhhcCCccCHHHHhh-hhhh
Q psy14321 84 SESFLTTDCLLITL-QNVLKGLVVYPKVIQR-LNTL 117 (124)
Q Consensus 84 ~ea~l~~~~~l~~~-~~v~~~l~v~~~~m~~-~~~~ 117 (124)
.+++......+..+ .++++|+.||+++|++ ++..
T Consensus 392 ~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~s 427 (495)
T 4adm_A 392 LESFKLLTNVSRLFAQRCIAGLTANVEHLRRLAESS 427 (495)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhcc
Confidence 35443333344555 8999999999999999 6543
No 51
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A
Probab=66.19 E-value=5.4 Score=33.40 Aligned_cols=33 Identities=6% Similarity=-0.032 Sum_probs=24.8
Q ss_pred hhhHHHHHHHHHhhhcCCccCHHHHhh-hhhhhh
Q psy14321 87 FLTTDCLLITLQNVLKGLVVYPKVIQR-LNTLRV 119 (124)
Q Consensus 87 ~l~~~~~l~~~~~v~~~l~v~~~~m~~-~~~~~~ 119 (124)
.+..+.+.....++++|+.||+|+|++ ++...-
T Consensus 394 ~ll~~~~~~~~~~~v~gl~vn~erm~~~l~~s~~ 427 (478)
T 3ocf_A 394 RLLGRAMTNLAERCVDGIEANVERCRAGAEESIS 427 (478)
T ss_dssp HHHHHHHHHHHHHTGGGCEECHHHHHHHHHTCGG
T ss_pred HHHHHHHHHHHHHhhCCCEECHHHHHHHHHhCcc
Confidence 356666666667889999999999999 654433
No 52
>3r8n_M 30S ribosomal protein S13; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_M* 3j18_M 3oaq_M 3ofa_M 3ofx_M 3ofo_M 3r8o_M 4a2i_M 4gd1_M 4gd2_M 3i1m_M 1vs7_M* 3e1a_F 3e1c_F 1vs5_M 3i1o_M 3i1q_M 3i1s_M 3i1z_M 3i21_M ...
Probab=38.04 E-value=72 Score=21.56 Aligned_cols=54 Identities=13% Similarity=0.077 Sum_probs=34.3
Q ss_pred HHHHHHHHc-CCCHHHHHHHHHHhcCccccCCccchhhhhhhHHHHHHHHHhhhcCCccCHH
Q psy14321 49 NIIMAMVKA-GGDRQVCHEKIRGALNPLFPHRRLTLSESFLTTDCLLITLQNVLKGLVVYPK 109 (124)
Q Consensus 49 ~vm~aLa~~-~lgR~~Ah~~V~~~a~~A~~~~~~~l~ea~l~~~~~l~~~~~v~~~l~v~~~ 109 (124)
.+.++|+.. |+|+..|+.+...+-..-...-. . +++.-+..+..++++..|-.|
T Consensus 13 ~v~~aLt~I~GIG~~~A~~I~~~~gid~~~r~~-~------Lt~~ei~~l~~~i~~~~ie~d 67 (114)
T 3r8n_M 13 HAVIALTSIYGVGKTRSKAILAAAGIAEDVKIS-E------LSEGQIDTLRDEVAKFVVEGD 67 (114)
T ss_dssp CHHHHGGGSTTCCHHHHHHHHHHTTCCTTCCST-T------CCHHHHHHHHHHHSSSCTTHH
T ss_pred EeHhhHhhhcCcCHHHHHHHHHHcCcCcccCcc-c------CCHHHHHHHHHHHHHhcchHH
Confidence 355667644 99999999999886654322221 2 223344556677788888765
No 53
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=30.20 E-value=1.7e+02 Score=21.72 Aligned_cols=56 Identities=11% Similarity=0.074 Sum_probs=36.4
Q ss_pred HHHHHHhhhhCC----ee-CHHHHHHHHHhhCC-----chHHHHHHHHHHHcCCCHHHHHHHHHHh
Q psy14321 16 LLITLQNVLEGL----VV-YPKVIQRHIDQELP-----FMATENIIMAMVKAGGDRQVCHEKIRGA 71 (124)
Q Consensus 16 aL~~~~~ll~gL----~V-~~~rM~~Nl~~t~g-----lI~SE~vm~aLa~~~lgR~~Ah~~V~~~ 71 (124)
.......+++.+ .| +++.|..-...++. +.+.|++.-+..+.|++|++|++++.+.
T Consensus 144 ~~~~v~~l~~~iG~~~~v~~E~~~d~~talsgsgpa~~~~~~eal~~a~v~~Gl~~~~a~~l~~~t 209 (280)
T 3tri_A 144 QKNLAESIMRAVGLVIWVSSEDQIEKIAALSGSGPAYIFLIMEALQEAAEQLGLTKETAELLTEQT 209 (280)
T ss_dssp HHHHHHHHHGGGEEEEECSSHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEECCHHHhhHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 344444454432 35 46667666665552 2346888777777799999999988764
No 54
>2y1q_A CLPC N-domain, negative regulator of genetic competence CLPC/MEC; transcription, proteolysis; 1.50A {Bacillus subtilis} PDB: 2y1r_A* 2k77_A
Probab=28.63 E-value=1.3e+02 Score=19.80 Aligned_cols=90 Identities=11% Similarity=0.046 Sum_probs=51.1
Q ss_pred HHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccCCccchhhhhhhHHHHHH----
Q psy14321 20 LQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPHRRLTLSESFLTTDCLLI---- 95 (124)
Q Consensus 20 ~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~~~~~l~ea~l~~~~~l~---- 95 (124)
+..+++.+.||++.+++.++..-+-.-... ....+++ .+.+++..+...|...+...+.-.-+... ++.
T Consensus 46 ~~~iL~~~g~~~~~l~~~l~~~l~~~~~~~-----~~~~~s~-~~~~vL~~A~~~A~~~~~~~i~~ehlLla-ll~~~~~ 118 (150)
T 2y1q_A 46 AAKALQALGLGSEKIQKEVESLIGRAQEMS-----QTIHYTP-RAKKVIELSMDEARKLGHSYVGTEHILLG-LIREGEG 118 (150)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHCCC----------CCEECH-HHHHHHHHHHHHHHHTTCSSBCHHHHHHH-HHHHCCS
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhccCCccc-----ccCCCCH-HHHHHHHHHHHHHHHcCCCeecHHHHHHH-HHhCCCc
Confidence 678899999999999998876544321110 0112333 46666666666655544433321111111 111
Q ss_pred HHHhhhcCCccCHHHHhh-hhh
Q psy14321 96 TLQNVLKGLVVYPKVIQR-LNT 116 (124)
Q Consensus 96 ~~~~v~~~l~v~~~~m~~-~~~ 116 (124)
...+++...-|+++.+++ +..
T Consensus 119 ~a~~~L~~~gi~~~~l~~~i~~ 140 (150)
T 2y1q_A 119 VAARVLNNLGVSLNKARQQVLQ 140 (150)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHH
Confidence 235788888899998887 544
No 55
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=24.23 E-value=2.2e+02 Score=24.14 Aligned_cols=105 Identities=14% Similarity=0.133 Sum_probs=57.3
Q ss_pred cc-chHhHHHHHHHHHHHHHHhhhhCCeeCHHHHHHHHHhhCCchHHHHHHHHHHHcCCCHHHHHHHHHHhcCccccC--
Q psy14321 2 KR-LTLSESFLTTDCLLITLQNVLEGLVVYPKVIQRHIDQELPFMATENIIMAMVKAGGDRQVCHEKIRGALNPLFPH-- 78 (124)
Q Consensus 2 Ew-~~lPe~~~~~~~aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI~SE~vm~aLa~~~lgR~~Ah~~V~~~a~~A~~~-- 78 (124)
|| ...|.++.++..+.+.++++.+- .-+..+|-. +-.|.--+-+.|++.++|.+.+++....++++
T Consensus 426 e~~~~~p~i~~~~~~I~RL~NDI~S~----------k~E~~rG~v-as~V~cYMke~GvSeEeA~~~i~~~Ie~~wK~lN 494 (550)
T 3m00_A 426 EWLSKNPKILEASVIICRVIDDTATY----------EVEKSRGQI-ATGIECCMRDYGISTKEAMAKFQNMAETAWKDIN 494 (550)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHSH----------HHHHHTTCT-TSHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcccHHHHHHHhhhheeeccchhH----------HHHHhcCCc-ccHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45 34577777777777777777552 123445543 12222223234899999999999988877663
Q ss_pred ----CccchhhhhhhHHHHHHHHHhhh-----cCCccCHHHHhh-hhhh
Q psy14321 79 ----RRLTLSESFLTTDCLLITLQNVL-----KGLVVYPKVIQR-LNTL 117 (124)
Q Consensus 79 ----~~~~l~ea~l~~~~~l~~~~~v~-----~~l~v~~~~m~~-~~~~ 117 (124)
....+|..|...--=+.++..++ ||-..-...|+. ++.+
T Consensus 495 ~e~l~~~~~p~~~~~~~~NlaR~~~~~Y~~~~Dg~t~~~~~~k~~i~~l 543 (550)
T 3m00_A 495 EGLLRPTPVSTEFLTPILNLARIIEVTYIHNLDGYTHPEKVLKPHIINL 543 (550)
T ss_dssp HHTSSSCSSCGGGTHHHHHHHHHHHHHTSCC-----CCHHHHHHHHHHH
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCCccHHHHHHHHHH
Confidence 11245555443333344455555 454443346766 6554
No 56
>3j20_O 30S ribosomal protein S13P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=23.74 E-value=1.8e+02 Score=20.48 Aligned_cols=27 Identities=15% Similarity=-0.077 Sum_probs=21.2
Q ss_pred HHHHHHHHc-CCCHHHHHHHHHHhcCcc
Q psy14321 49 NIIMAMVKA-GGDRQVCHEKIRGALNPL 75 (124)
Q Consensus 49 ~vm~aLa~~-~lgR~~Ah~~V~~~a~~A 75 (124)
.+.++|+.. |+||..|+.+.+.+-..-
T Consensus 20 ~v~~aLt~I~GIG~~~A~~I~~~~gid~ 47 (148)
T 3j20_O 20 QLRWALTAIKGIGINFATMVCRVAGLDP 47 (148)
T ss_dssp CHHHHHHHSTTCCHHHHHHHHHHHTCCS
T ss_pred EehhhhhhccCcCHHHHHHHHHHhCCCC
Confidence 456777765 999999999999876553
No 57
>3iz6_M 40S ribosomal protein S18 (S13P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=21.87 E-value=1.6e+02 Score=20.92 Aligned_cols=49 Identities=14% Similarity=0.090 Sum_probs=30.6
Q ss_pred HHHHHHHHc-CCCHHHHHHHHHHhcCccccCCccchhhhhhhHHHHHHHHHhhhcCC
Q psy14321 49 NIIMAMVKA-GGDRQVCHEKIRGALNPLFPHRRLTLSESFLTTDCLLITLQNVLKGL 104 (124)
Q Consensus 49 ~vm~aLa~~-~lgR~~Ah~~V~~~a~~A~~~~~~~l~ea~l~~~~~l~~~~~v~~~l 104 (124)
.+.++|+.. |+||..|+.+.+.+-..-...-. . +++.-+..+..+++|+
T Consensus 25 ~v~~ALt~I~GIG~~~A~~I~~~~gid~~~r~g-~------Lt~~ei~~l~~~i~~~ 74 (152)
T 3iz6_M 25 KIMFALTSIKGVGRRFSNIVCKKADIDMNKRAG-E------LSAEEMDRLMAVVHNP 74 (152)
T ss_dssp BHHHHHTTSTTCCHHHHHHHHHHHTCCSSSBTT-T------SCHHHHHHHHHHHHSC
T ss_pred EeHhhhhhccCcCHHHHHHHHHHcCCCCCcEeC-c------CCHHHHHHHHHHHHhh
Confidence 456777654 99999999999987654322211 2 2333445566777664
No 58
>3sjr_A Uncharacterized protein; PSI-biology, MCSG, midwest center for structural genomics, U function, structural genomics; 2.94A {Chromobacterium violaceum}
Probab=21.28 E-value=28 Score=25.52 Aligned_cols=30 Identities=20% Similarity=0.182 Sum_probs=26.0
Q ss_pred HHHHHHhhhhCCeeCHHHHHHHHHhhCCch
Q psy14321 16 LLITLQNVLEGLVVYPKVIQRHIDQELPFM 45 (124)
Q Consensus 16 aL~~~~~ll~gL~V~~~rM~~Nl~~t~glI 45 (124)
=...++++|+||.|..-.+..|++.|.-++
T Consensus 135 GF~EArdIL~GL~VleG~IA~~IdkTY~Lv 164 (175)
T 3sjr_A 135 GYQEACQVLRQLNVYTPAVAGQLQGLLLLT 164 (175)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhccccCcHHHHhHHHHHHHH
Confidence 346789999999999999999999987654
Done!