Query psy14323
Match_columns 400
No_of_seqs 249 out of 1412
Neff 6.2
Searched_HMMs 46136
Date Fri Aug 16 16:55:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14323.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14323hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2728|consensus 100.0 1.1E-73 2.3E-78 533.1 20.5 253 1-399 45-298 (302)
2 PF04127 DFP: DNA / pantothena 100.0 2.7E-46 5.8E-51 344.7 15.2 169 140-361 9-185 (185)
3 PRK09620 hypothetical protein; 100.0 8.7E-42 1.9E-46 324.6 21.8 200 140-393 9-222 (229)
4 PRK13982 bifunctional SbtC-lik 100.0 5E-42 1.1E-46 354.3 19.8 194 140-393 262-469 (475)
5 PRK06732 phosphopantothenate-- 100.0 6.4E-41 1.4E-45 318.6 21.0 198 140-393 6-227 (229)
6 TIGR00521 coaBC_dfp phosphopan 100.0 1.8E-39 3.9E-44 329.9 21.3 193 140-390 191-389 (390)
7 PRK05579 bifunctional phosphop 100.0 2.6E-39 5.7E-44 329.7 22.3 196 140-394 194-397 (399)
8 TIGR02114 coaB_strep phosphopa 100.0 1.2E-38 2.5E-43 302.8 19.5 196 140-392 5-225 (227)
9 COG0452 Dfp Phosphopantothenoy 100.0 3.9E-34 8.4E-39 291.1 8.5 287 3-394 95-391 (392)
10 KOG2728|consensus 99.9 1.1E-22 2.4E-27 191.1 5.7 136 105-255 15-158 (302)
11 PF04127 DFP: DNA / pantothena 99.5 2.3E-14 5E-19 132.5 3.1 80 4-135 18-97 (185)
12 PRK09620 hypothetical protein; 99.2 1.5E-11 3.2E-16 117.4 4.3 86 4-136 18-103 (229)
13 PRK13982 bifunctional SbtC-lik 99.1 4.7E-11 1E-15 124.5 2.4 79 4-135 271-349 (475)
14 TIGR00521 coaBC_dfp phosphopan 98.8 2.4E-09 5.2E-14 109.7 4.2 80 5-135 201-280 (390)
15 PRK06732 phosphopantothenate-- 98.8 5.3E-09 1.1E-13 99.8 4.1 37 5-41 16-52 (229)
16 PRK05579 bifunctional phosphop 98.7 5.1E-09 1.1E-13 107.6 3.7 79 4-134 203-281 (399)
17 TIGR02114 coaB_strep phosphopa 98.3 4.8E-07 1E-11 86.3 3.9 37 4-40 14-50 (227)
18 COG0452 Dfp Phosphopantothenoy 97.9 9E-06 2E-10 83.6 4.1 36 5-40 199-234 (392)
19 PRK07577 short chain dehydroge 90.6 1.2 2.5E-05 41.2 8.0 26 160-185 11-36 (234)
20 PRK07097 gluconate 5-dehydroge 90.6 0.95 2.1E-05 43.0 7.6 31 154-185 13-43 (265)
21 PF13561 adh_short_C2: Enoyl-( 90.4 0.76 1.7E-05 43.1 6.7 27 160-186 4-30 (241)
22 PRK06179 short chain dehydroge 89.9 1.2 2.5E-05 42.4 7.6 30 155-185 8-37 (270)
23 PRK06182 short chain dehydroge 89.9 1.3 2.8E-05 42.2 7.9 29 156-185 8-36 (273)
24 PRK05717 oxidoreductase; Valid 89.8 1.2 2.7E-05 41.9 7.6 26 160-185 18-43 (255)
25 PRK06841 short chain dehydroge 89.7 1.5 3.2E-05 41.2 8.0 27 159-185 22-48 (255)
26 PRK07814 short chain dehydroge 89.7 1.1 2.4E-05 42.5 7.3 26 160-185 18-43 (263)
27 PRK06398 aldose dehydrogenase; 89.7 1.3 2.8E-05 42.1 7.6 26 160-185 14-39 (258)
28 COG1089 Gmd GDP-D-mannose dehy 89.6 0.31 6.7E-06 48.5 3.3 78 14-131 11-89 (345)
29 PRK13394 3-hydroxybutyrate deh 89.5 1.2 2.7E-05 41.7 7.3 27 159-185 14-40 (262)
30 PRK06138 short chain dehydroge 89.5 1.5 3.2E-05 40.9 7.8 26 160-185 13-38 (252)
31 PRK12937 short chain dehydroge 89.2 1.5 3.2E-05 40.7 7.5 27 160-186 13-39 (245)
32 PRK12828 short chain dehydroge 89.0 2.3 4.9E-05 39.1 8.6 27 160-186 15-41 (239)
33 KOG1502|consensus 88.9 1.4 3.1E-05 44.4 7.5 27 160-186 14-40 (327)
34 PF01073 3Beta_HSD: 3-beta hyd 88.8 1.1 2.4E-05 43.9 6.6 26 160-185 5-32 (280)
35 PRK07063 short chain dehydroge 88.6 1.6 3.5E-05 41.1 7.5 30 155-185 11-40 (260)
36 PRK07774 short chain dehydroge 88.6 1.4 3.1E-05 41.0 7.1 30 155-185 10-39 (250)
37 PRK12745 3-ketoacyl-(acyl-carr 88.6 1.9 4.1E-05 40.3 7.9 30 155-185 6-35 (256)
38 PRK12938 acetyacetyl-CoA reduc 88.6 1.8 3.9E-05 40.3 7.6 26 160-185 11-36 (246)
39 PRK06194 hypothetical protein; 88.5 1.6 3.5E-05 41.8 7.5 26 160-185 14-39 (287)
40 PRK06200 2,3-dihydroxy-2,3-dih 88.5 2.2 4.8E-05 40.4 8.3 30 155-185 10-39 (263)
41 PRK12743 oxidoreductase; Provi 88.5 1.9 4.2E-05 40.7 7.9 30 155-185 6-35 (256)
42 PRK12826 3-ketoacyl-(acyl-carr 88.4 1.6 3.5E-05 40.4 7.2 26 160-185 14-39 (251)
43 PRK06079 enoyl-(acyl carrier p 88.3 2.6 5.6E-05 40.0 8.7 34 152-185 8-42 (252)
44 PRK06114 short chain dehydroge 88.3 2.1 4.5E-05 40.4 8.0 34 152-186 9-42 (254)
45 PRK07067 sorbitol dehydrogenas 88.2 1.8 3.8E-05 40.8 7.4 30 155-185 10-39 (257)
46 PRK08643 acetoin reductase; Va 88.1 1.8 3.9E-05 40.7 7.4 30 155-185 6-35 (256)
47 PRK07666 fabG 3-ketoacyl-(acyl 88.0 1.7 3.7E-05 40.4 7.1 31 155-186 11-41 (239)
48 PRK05557 fabG 3-ketoacyl-(acyl 87.8 2.4 5.1E-05 39.1 7.9 31 155-186 9-39 (248)
49 PRK12746 short chain dehydroge 87.8 2.9 6.2E-05 39.2 8.5 29 155-184 10-38 (254)
50 TIGR03325 BphB_TodD cis-2,3-di 87.7 2.3 5E-05 40.3 7.9 32 153-185 7-38 (262)
51 PRK12429 3-hydroxybutyrate deh 87.7 1.9 4.2E-05 40.2 7.3 31 155-186 8-38 (258)
52 PRK07523 gluconate 5-dehydroge 87.6 2 4.3E-05 40.4 7.4 26 160-185 18-43 (255)
53 PRK05867 short chain dehydroge 87.5 1.9 4.1E-05 40.6 7.1 32 153-185 11-42 (253)
54 PRK12939 short chain dehydroge 87.5 2.3 4.9E-05 39.5 7.6 31 154-185 10-40 (250)
55 PRK10538 malonic semialdehyde 87.3 2.4 5.2E-05 39.8 7.8 26 160-185 8-33 (248)
56 PRK08416 7-alpha-hydroxysteroi 87.3 2.9 6.4E-05 39.6 8.4 27 160-186 16-42 (260)
57 PRK08251 short chain dehydroge 87.1 3.1 6.7E-05 38.8 8.3 26 160-185 10-35 (248)
58 PRK12935 acetoacetyl-CoA reduc 87.0 2.4 5.1E-05 39.5 7.5 33 152-185 7-39 (247)
59 PRK12825 fabG 3-ketoacyl-(acyl 86.9 3.6 7.8E-05 37.8 8.6 27 160-186 14-40 (249)
60 PRK12823 benD 1,6-dihydroxycyc 86.9 2.7 5.8E-05 39.6 7.8 26 160-185 16-41 (260)
61 PRK05653 fabG 3-ketoacyl-(acyl 86.9 2.5 5.5E-05 38.8 7.5 31 155-186 9-39 (246)
62 PRK08263 short chain dehydroge 86.8 2.8 6E-05 40.1 8.0 30 155-185 7-36 (275)
63 PRK12829 short chain dehydroge 86.8 2.8 6E-05 39.4 7.9 30 155-185 15-44 (264)
64 PRK07478 short chain dehydroge 86.8 2.8 6E-05 39.4 7.8 26 160-185 14-39 (254)
65 PRK08945 putative oxoacyl-(acy 86.8 4.2 9.2E-05 38.0 9.1 35 151-186 12-46 (247)
66 COG4221 Short-chain alcohol de 86.7 4.2 9.2E-05 39.5 9.0 35 151-186 6-40 (246)
67 PRK09135 pteridine reductase; 86.7 3.7 8E-05 38.0 8.5 30 155-185 10-39 (249)
68 PRK08936 glucose-1-dehydrogena 86.6 3.8 8.2E-05 38.7 8.7 27 160-186 15-41 (261)
69 PRK06180 short chain dehydroge 86.6 3 6.5E-05 40.0 8.1 26 160-185 12-37 (277)
70 PRK08340 glucose-1-dehydrogena 86.5 2.8 6.1E-05 39.6 7.8 26 160-185 8-33 (259)
71 PRK08589 short chain dehydroge 86.5 2.9 6.2E-05 40.0 7.9 30 155-185 10-39 (272)
72 PRK06947 glucose-1-dehydrogena 86.4 3.3 7.1E-05 38.6 8.1 26 160-185 10-35 (248)
73 PRK06482 short chain dehydroge 86.4 2.9 6.3E-05 39.9 7.8 26 160-185 10-35 (276)
74 PRK07035 short chain dehydroge 86.4 2.8 6E-05 39.3 7.6 26 160-185 16-41 (252)
75 TIGR01963 PHB_DH 3-hydroxybuty 86.3 2.5 5.4E-05 39.4 7.2 26 160-185 9-34 (255)
76 PRK08085 gluconate 5-dehydroge 86.3 2.5 5.5E-05 39.7 7.3 26 160-185 17-42 (254)
77 TIGR01829 AcAcCoA_reduct aceto 86.2 5.1 0.00011 36.9 9.2 25 161-185 9-33 (242)
78 PRK08226 short chain dehydroge 86.1 2.4 5.1E-05 40.0 7.0 26 160-185 14-39 (263)
79 PRK08265 short chain dehydroge 86.1 3.2 6.8E-05 39.4 7.9 33 152-185 7-39 (261)
80 PRK08267 short chain dehydroge 86.0 4.2 9.2E-05 38.3 8.7 26 160-185 9-34 (260)
81 PRK07062 short chain dehydroge 86.0 4.3 9.2E-05 38.4 8.7 26 160-185 16-41 (265)
82 PRK07024 short chain dehydroge 85.9 3.2 6.9E-05 39.2 7.8 26 160-185 10-35 (257)
83 TIGR01832 kduD 2-deoxy-D-gluco 85.7 2.4 5.3E-05 39.5 6.8 29 156-185 10-38 (248)
84 PRK08213 gluconate 5-dehydroge 85.7 2.7 5.9E-05 39.6 7.2 33 152-185 13-45 (259)
85 PRK12827 short chain dehydroge 85.6 4.8 0.0001 37.2 8.7 26 160-185 14-39 (249)
86 PRK05876 short chain dehydroge 85.6 2.7 5.9E-05 40.5 7.2 30 155-185 10-39 (275)
87 PRK07890 short chain dehydroge 85.5 2.6 5.7E-05 39.5 7.0 26 160-185 13-38 (258)
88 PRK05854 short chain dehydroge 85.5 4.6 9.9E-05 39.8 9.0 32 153-185 16-47 (313)
89 PRK07856 short chain dehydroge 85.5 3 6.6E-05 39.1 7.4 26 160-185 14-39 (252)
90 PRK07109 short chain dehydroge 85.5 2.8 6.1E-05 41.9 7.5 30 155-185 12-41 (334)
91 PRK12744 short chain dehydroge 85.5 4.5 9.7E-05 38.1 8.5 31 154-185 11-41 (257)
92 PRK08339 short chain dehydroge 85.4 3.6 7.8E-05 39.3 8.0 30 155-185 12-41 (263)
93 PRK07069 short chain dehydroge 85.3 5.5 0.00012 37.0 9.0 25 161-185 8-32 (251)
94 PLN02253 xanthoxin dehydrogena 85.2 4.2 9.1E-05 38.8 8.3 30 155-185 22-51 (280)
95 PRK06171 sorbitol-6-phosphate 85.1 3 6.6E-05 39.4 7.3 32 153-185 11-42 (266)
96 PRK08993 2-deoxy-D-gluconate 3 85.1 2.8 6E-05 39.6 7.0 25 160-184 18-42 (253)
97 PRK08063 enoyl-(acyl carrier p 85.1 3.8 8.2E-05 38.1 7.8 24 160-183 12-35 (250)
98 PRK06196 oxidoreductase; Provi 85.1 3.6 7.8E-05 40.4 8.0 30 155-185 30-59 (315)
99 PRK06197 short chain dehydroge 85.1 3.9 8.4E-05 39.9 8.2 26 160-185 24-49 (306)
100 PRK07231 fabG 3-ketoacyl-(acyl 85.0 3.2 6.9E-05 38.5 7.2 28 159-186 12-39 (251)
101 PRK05693 short chain dehydroge 84.9 3.6 7.9E-05 39.2 7.8 26 160-185 9-34 (274)
102 PRK07326 short chain dehydroge 84.9 3.4 7.4E-05 38.1 7.3 26 160-185 14-39 (237)
103 PRK05993 short chain dehydroge 84.9 3.3 7.2E-05 39.7 7.5 26 160-185 12-37 (277)
104 PRK06123 short chain dehydroge 84.9 4 8.7E-05 37.9 7.9 26 160-185 10-35 (248)
105 PRK08628 short chain dehydroge 84.7 3.1 6.7E-05 39.1 7.0 32 154-186 10-41 (258)
106 PRK06463 fabG 3-ketoacyl-(acyl 84.6 4 8.6E-05 38.4 7.8 32 153-185 9-40 (255)
107 PRK05875 short chain dehydroge 84.6 3.5 7.5E-05 39.2 7.4 30 155-185 11-40 (276)
108 PRK06172 short chain dehydroge 84.5 3.3 7.1E-05 38.8 7.1 27 160-186 15-41 (253)
109 TIGR02415 23BDH acetoin reduct 84.5 3.7 8E-05 38.3 7.4 26 160-185 8-33 (254)
110 PRK09134 short chain dehydroge 84.5 3.9 8.5E-05 38.5 7.7 30 155-185 13-42 (258)
111 PRK06483 dihydromonapterin red 84.3 4.6 0.0001 37.4 8.0 27 160-186 10-36 (236)
112 PRK06523 short chain dehydroge 84.3 3.1 6.7E-05 39.1 6.9 30 155-185 13-42 (260)
113 PRK08220 2,3-dihydroxybenzoate 84.2 3.9 8.4E-05 38.1 7.4 32 153-185 10-41 (252)
114 PRK07832 short chain dehydroge 84.1 6.9 0.00015 37.3 9.3 26 160-185 8-33 (272)
115 PRK08277 D-mannonate oxidoredu 84.1 3.5 7.5E-05 39.4 7.2 32 153-185 12-43 (278)
116 PRK06181 short chain dehydroge 84.0 3.9 8.4E-05 38.5 7.4 26 160-185 9-34 (263)
117 PRK06949 short chain dehydroge 83.9 4 8.6E-05 38.2 7.4 27 159-185 16-42 (258)
118 PRK07074 short chain dehydroge 83.9 5.3 0.00012 37.5 8.3 30 155-185 6-35 (257)
119 PRK06124 gluconate 5-dehydroge 83.9 4 8.7E-05 38.3 7.4 31 154-185 14-44 (256)
120 PRK06139 short chain dehydroge 83.8 3.9 8.5E-05 40.9 7.7 30 155-185 11-40 (330)
121 PRK07806 short chain dehydroge 83.8 6.5 0.00014 36.6 8.8 26 160-185 14-39 (248)
122 PRK06550 fabG 3-ketoacyl-(acyl 83.7 4.5 9.8E-05 37.3 7.6 26 160-185 13-38 (235)
123 TIGR01830 3oxo_ACP_reduc 3-oxo 83.7 5 0.00011 36.8 7.9 27 160-186 6-32 (239)
124 PRK06500 short chain dehydroge 83.6 5 0.00011 37.2 7.9 26 160-185 14-39 (249)
125 PRK06935 2-deoxy-D-gluconate 3 83.6 4.6 9.9E-05 38.1 7.7 26 160-185 23-48 (258)
126 PRK06057 short chain dehydroge 83.5 6.6 0.00014 36.9 8.8 27 159-185 14-40 (255)
127 PRK07454 short chain dehydroge 83.5 3.9 8.5E-05 38.0 7.1 30 155-185 10-39 (241)
128 PRK12481 2-deoxy-D-gluconate 3 83.5 3.7 8E-05 38.8 7.0 30 155-185 12-41 (251)
129 PF04321 RmlD_sub_bind: RmlD s 83.2 1.1 2.4E-05 43.9 3.4 26 160-185 8-33 (286)
130 PRK08594 enoyl-(acyl carrier p 83.2 8.3 0.00018 36.7 9.4 34 152-185 8-42 (257)
131 PRK07889 enoyl-(acyl carrier p 83.0 8.5 0.00018 36.5 9.4 34 152-185 8-42 (256)
132 TIGR02685 pter_reduc_Leis pter 83.0 9.8 0.00021 36.1 9.8 30 155-185 5-34 (267)
133 PRK06077 fabG 3-ketoacyl-(acyl 82.7 6.2 0.00014 36.7 8.2 26 160-185 14-39 (252)
134 PRK06484 short chain dehydroge 82.6 4.4 9.6E-05 42.6 7.9 34 5-39 6-39 (520)
135 PF13460 NAD_binding_10: NADH( 82.5 4.2 9E-05 36.1 6.6 28 160-187 6-33 (183)
136 TIGR03466 HpnA hopanoid-associ 82.5 4.4 9.5E-05 39.3 7.3 27 160-186 8-34 (328)
137 PRK08264 short chain dehydroge 82.3 4.2 9E-05 37.6 6.8 26 160-185 14-40 (238)
138 PRK06603 enoyl-(acyl carrier p 82.1 7.9 0.00017 36.8 8.8 34 152-185 9-43 (260)
139 TIGR03206 benzo_BadH 2-hydroxy 82.0 4.9 0.00011 37.3 7.2 26 160-185 11-36 (250)
140 PLN02778 3,5-epimerase/4-reduc 82.0 3.2 7E-05 40.7 6.2 30 154-183 11-40 (298)
141 PRK07984 enoyl-(acyl carrier p 81.8 7.8 0.00017 37.2 8.7 34 152-185 7-41 (262)
142 PRK07533 enoyl-(acyl carrier p 81.7 11 0.00025 35.6 9.7 35 151-185 10-45 (258)
143 PRK06128 oxidoreductase; Provi 81.7 5.1 0.00011 39.0 7.5 26 160-185 63-88 (300)
144 TIGR01214 rmlD dTDP-4-dehydror 81.5 3.7 7.9E-05 39.3 6.2 26 160-185 7-32 (287)
145 PRK05872 short chain dehydroge 81.3 7.4 0.00016 37.9 8.4 26 160-185 17-42 (296)
146 PRK08159 enoyl-(acyl carrier p 81.2 6.9 0.00015 37.7 8.1 35 151-185 10-45 (272)
147 PRK09242 tropinone reductase; 81.2 5.6 0.00012 37.4 7.3 30 155-185 13-42 (257)
148 PRK07825 short chain dehydroge 81.1 7.2 0.00016 37.1 8.1 26 160-185 13-38 (273)
149 PRK07985 oxidoreductase; Provi 81.0 6.8 0.00015 38.2 8.1 30 155-185 53-82 (294)
150 PRK09730 putative NAD(P)-bindi 80.9 6.8 0.00015 36.2 7.7 26 160-185 9-34 (247)
151 PRK09072 short chain dehydroge 80.8 3.8 8.1E-05 38.8 6.0 26 160-185 13-38 (263)
152 PRK12384 sorbitol-6-phosphate 80.7 9.1 0.0002 35.9 8.6 26 160-185 10-35 (259)
153 PRK12936 3-ketoacyl-(acyl-carr 80.6 6.9 0.00015 36.1 7.6 26 160-185 14-39 (245)
154 COG0300 DltE Short-chain dehyd 80.6 6.6 0.00014 38.6 7.7 30 156-186 11-40 (265)
155 PRK07453 protochlorophyllide o 80.6 6.5 0.00014 38.6 7.8 30 155-185 10-39 (322)
156 PRK06484 short chain dehydroge 80.4 8.6 0.00019 40.4 9.1 34 151-185 5-38 (520)
157 TIGR01831 fabG_rel 3-oxoacyl-( 80.3 7 0.00015 36.1 7.5 26 161-186 7-32 (239)
158 PRK05565 fabG 3-ketoacyl-(acyl 80.1 8.3 0.00018 35.6 8.0 26 160-185 13-39 (247)
159 PRK12824 acetoacetyl-CoA reduc 80.0 9.1 0.0002 35.3 8.2 27 160-186 10-36 (245)
160 PRK12748 3-ketoacyl-(acyl-carr 80.0 8.3 0.00018 36.3 8.0 32 154-185 8-40 (256)
161 PLN02725 GDP-4-keto-6-deoxyman 79.9 3.2 7E-05 39.9 5.3 25 160-184 5-29 (306)
162 PRK09186 flagellin modificatio 79.7 11 0.00024 35.2 8.7 33 152-185 5-37 (256)
163 PRK05866 short chain dehydroge 79.7 6.3 0.00014 38.4 7.3 30 155-185 44-73 (293)
164 PRK07775 short chain dehydroge 79.6 6.3 0.00014 37.7 7.2 30 155-185 14-43 (274)
165 PRK07370 enoyl-(acyl carrier p 79.3 14 0.0003 35.2 9.4 34 152-185 7-41 (258)
166 PRK06198 short chain dehydroge 79.2 7 0.00015 36.6 7.3 30 155-185 10-40 (260)
167 PRK06914 short chain dehydroge 79.2 8.2 0.00018 36.7 7.8 26 160-185 11-36 (280)
168 PRK11150 rfaD ADP-L-glycero-D- 79.2 2.9 6.3E-05 40.6 4.8 27 160-186 7-33 (308)
169 PRK12747 short chain dehydroge 78.8 15 0.00033 34.3 9.4 29 155-184 8-36 (252)
170 PRK08690 enoyl-(acyl carrier p 78.3 7.8 0.00017 36.9 7.3 34 152-185 7-41 (261)
171 PRK08278 short chain dehydroge 78.1 11 0.00023 36.2 8.3 31 155-186 10-40 (273)
172 PLN00015 protochlorophyllide r 77.9 12 0.00025 36.8 8.6 26 160-185 5-31 (308)
173 PRK12859 3-ketoacyl-(acyl-carr 77.8 12 0.00026 35.3 8.5 30 155-184 10-40 (256)
174 PRK05650 short chain dehydroge 77.7 9 0.00019 36.4 7.6 26 160-185 8-33 (270)
175 PRK07576 short chain dehydroge 77.5 7.1 0.00015 37.2 6.8 27 159-185 16-42 (264)
176 PRK08017 oxidoreductase; Provi 77.5 11 0.00023 35.2 7.9 26 160-185 10-35 (256)
177 PRK07791 short chain dehydroge 77.5 9.4 0.0002 37.0 7.8 32 153-185 8-39 (286)
178 PF00106 adh_short: short chai 77.4 14 0.0003 32.0 8.1 26 160-185 8-33 (167)
179 PRK06701 short chain dehydroge 77.3 9.1 0.0002 37.2 7.7 26 160-185 54-79 (290)
180 PRK07792 fabG 3-ketoacyl-(acyl 77.3 8.3 0.00018 37.8 7.4 32 153-185 14-45 (306)
181 TIGR01472 gmd GDP-mannose 4,6- 77.2 6.8 0.00015 38.8 6.8 27 160-186 8-34 (343)
182 PRK06997 enoyl-(acyl carrier p 76.6 13 0.00028 35.4 8.4 32 153-184 8-40 (260)
183 PRK08217 fabG 3-ketoacyl-(acyl 76.5 15 0.00033 33.9 8.6 30 155-185 9-38 (253)
184 TIGR01777 yfcH conserved hypot 76.5 6.6 0.00014 37.3 6.3 27 160-186 6-32 (292)
185 PF01370 Epimerase: NAD depend 76.4 6.4 0.00014 36.0 6.0 28 160-187 6-33 (236)
186 KOG1209|consensus 76.2 13 0.00027 36.0 7.8 38 151-188 7-44 (289)
187 PRK07677 short chain dehydroge 76.1 12 0.00026 35.1 7.9 25 161-185 10-34 (252)
188 KOG1205|consensus 75.9 15 0.00032 36.6 8.6 35 151-186 12-46 (282)
189 CHL00194 ycf39 Ycf39; Provisio 75.7 6.1 0.00013 38.8 6.0 27 160-186 8-34 (317)
190 PRK07060 short chain dehydroge 75.7 13 0.00028 34.3 7.9 27 159-185 16-42 (245)
191 PRK06113 7-alpha-hydroxysteroi 75.5 18 0.0004 33.9 9.0 26 160-185 19-44 (255)
192 PRK08642 fabG 3-ketoacyl-(acyl 75.5 12 0.00026 34.8 7.6 26 160-185 13-38 (253)
193 PRK10675 UDP-galactose-4-epime 75.2 14 0.00031 36.2 8.4 26 160-185 8-33 (338)
194 PRK07201 short chain dehydroge 74.8 8.5 0.00018 41.7 7.3 26 160-185 379-404 (657)
195 PRK09291 short chain dehydroge 74.8 15 0.00033 34.2 8.2 26 160-185 10-35 (257)
196 KOG1014|consensus 74.7 8.6 0.00019 38.6 6.6 114 158-308 55-170 (312)
197 PRK15181 Vi polysaccharide bio 74.3 9.8 0.00021 38.0 7.1 27 159-185 22-48 (348)
198 COG2085 Predicted dinucleotide 73.3 4.6 9.9E-05 38.4 4.1 29 158-186 6-34 (211)
199 PRK07102 short chain dehydroge 73.3 12 0.00026 34.8 7.0 26 160-185 9-34 (243)
200 PRK12367 short chain dehydroge 73.1 13 0.00029 35.4 7.4 27 159-185 21-47 (245)
201 PRK09987 dTDP-4-dehydrorhamnos 73.1 4.7 0.0001 39.4 4.4 25 160-185 8-32 (299)
202 PRK08703 short chain dehydroge 72.9 32 0.0007 31.7 9.9 28 159-186 13-40 (239)
203 PRK06125 short chain dehydroge 72.7 15 0.00032 34.6 7.6 32 153-185 9-40 (259)
204 PRK07023 short chain dehydroge 72.6 20 0.00043 33.3 8.4 26 160-185 9-34 (243)
205 PRK08415 enoyl-(acyl carrier p 72.6 32 0.00069 33.2 10.0 34 152-185 6-40 (274)
206 TIGR01289 LPOR light-dependent 72.5 14 0.0003 36.5 7.6 30 155-185 7-37 (314)
207 PRK06505 enoyl-(acyl carrier p 72.4 17 0.00038 34.9 8.1 35 151-185 7-42 (271)
208 PLN02896 cinnamyl-alcohol dehy 72.4 11 0.00025 37.4 7.1 32 154-185 12-43 (353)
209 PRK05855 short chain dehydroge 72.1 11 0.00025 39.5 7.3 26 160-185 323-348 (582)
210 PF00070 Pyr_redox: Pyridine n 71.8 6.1 0.00013 30.7 4.0 31 13-43 6-36 (80)
211 PRK08862 short chain dehydroge 71.7 25 0.00054 32.9 8.8 30 155-185 9-38 (227)
212 cd01078 NAD_bind_H4MPT_DH NADP 71.5 32 0.00069 31.4 9.3 27 159-185 35-61 (194)
213 PRK05599 hypothetical protein; 71.4 21 0.00045 33.6 8.3 24 161-185 9-32 (246)
214 PRK12742 oxidoreductase; Provi 71.2 19 0.0004 33.2 7.8 27 159-185 13-39 (237)
215 PRK07578 short chain dehydroge 71.0 14 0.00031 33.2 6.8 25 160-185 8-32 (199)
216 PRK06720 hypothetical protein; 70.8 18 0.00039 32.7 7.4 26 160-185 24-49 (169)
217 PF13460 NAD_binding_10: NADH( 70.8 4.4 9.5E-05 36.0 3.3 31 13-43 6-36 (183)
218 PF13561 adh_short_C2: Enoyl-( 70.7 3.8 8.2E-05 38.4 3.0 28 13-40 4-31 (241)
219 PRK06940 short chain dehydroge 70.2 19 0.00041 34.6 7.8 30 153-185 4-33 (275)
220 PRK07904 short chain dehydroge 70.1 29 0.00062 32.9 9.0 32 155-186 11-43 (253)
221 PLN02214 cinnamoyl-CoA reducta 69.3 18 0.00039 36.1 7.7 72 161-273 19-92 (342)
222 COG2910 Putative NADH-flavin r 69.1 4.5 9.7E-05 38.0 3.0 31 13-43 8-38 (211)
223 TIGR03589 PseB UDP-N-acetylglu 69.1 15 0.00033 36.3 7.0 26 160-185 12-39 (324)
224 COG2910 Putative NADH-flavin r 68.9 5.4 0.00012 37.5 3.5 27 160-186 8-34 (211)
225 PLN00198 anthocyanidin reducta 68.5 16 0.00034 36.1 7.0 28 159-186 16-43 (338)
226 PRK08261 fabG 3-ketoacyl-(acyl 68.1 30 0.00065 35.7 9.3 26 160-185 218-243 (450)
227 KOG1014|consensus 67.0 10 0.00022 38.1 5.3 65 13-111 57-122 (312)
228 PF02737 3HCDH_N: 3-hydroxyacy 66.1 6.5 0.00014 36.0 3.5 25 161-185 7-31 (180)
229 PLN02657 3,8-divinyl protochlo 65.9 15 0.00033 37.6 6.5 35 152-186 60-94 (390)
230 PRK14194 bifunctional 5,10-met 65.0 11 0.00023 37.9 5.0 27 160-186 167-193 (301)
231 smart00822 PKS_KR This enzymat 64.9 31 0.00068 29.3 7.4 26 160-185 8-34 (180)
232 PRK07424 bifunctional sterol d 64.9 22 0.00047 37.1 7.4 26 160-185 186-211 (406)
233 COG2085 Predicted dinucleotide 64.5 6.5 0.00014 37.4 3.2 31 9-39 4-34 (211)
234 PF05368 NmrA: NmrA-like famil 64.3 13 0.00029 34.4 5.3 27 160-186 6-32 (233)
235 COG0300 DltE Short-chain dehyd 64.1 6.7 0.00014 38.6 3.3 32 8-40 10-41 (265)
236 PLN02240 UDP-glucose 4-epimera 63.9 32 0.0007 33.8 8.3 82 160-275 13-94 (352)
237 COG1091 RfbD dTDP-4-dehydrorha 63.9 11 0.00024 37.5 4.7 25 160-185 8-32 (281)
238 TIGR02197 heptose_epim ADP-L-g 63.5 9.9 0.00022 36.6 4.4 25 161-185 7-32 (314)
239 PRK10217 dTDP-glucose 4,6-dehy 63.4 15 0.00033 36.4 5.8 73 160-274 9-86 (355)
240 PLN02427 UDP-apiose/xylose syn 63.0 18 0.00039 36.6 6.3 32 154-185 16-48 (386)
241 PF02737 3HCDH_N: 3-hydroxyacy 62.8 6.8 0.00015 35.9 3.0 26 13-38 6-31 (180)
242 COG4221 Short-chain alcohol de 62.7 11 0.00023 36.7 4.4 35 5-40 7-41 (246)
243 PF07993 NAD_binding_4: Male s 62.0 16 0.00034 34.7 5.4 27 160-186 4-32 (249)
244 PRK07231 fabG 3-ketoacyl-(acyl 61.2 8.8 0.00019 35.5 3.5 27 13-39 13-39 (251)
245 PRK11908 NAD-dependent epimera 61.1 26 0.00057 34.7 7.1 26 160-185 9-35 (347)
246 COG0451 WcaG Nucleoside-diphos 61.0 25 0.00054 33.7 6.7 63 161-273 9-75 (314)
247 PRK08125 bifunctional UDP-gluc 60.9 18 0.0004 39.7 6.4 27 160-186 323-350 (660)
248 PRK06924 short chain dehydroge 60.8 8.9 0.00019 35.7 3.4 27 13-39 9-35 (251)
249 PRK08340 glucose-1-dehydrogena 60.4 8.7 0.00019 36.2 3.3 26 13-38 8-33 (259)
250 PRK07831 short chain dehydroge 60.2 59 0.0013 30.5 9.0 34 152-185 18-51 (262)
251 PF03807 F420_oxidored: NADP o 60.0 11 0.00023 30.1 3.3 26 13-38 6-35 (96)
252 PRK14179 bifunctional 5,10-met 59.5 12 0.00027 37.1 4.3 26 160-185 166-191 (284)
253 PRK05865 hypothetical protein; 59.1 26 0.00057 40.0 7.3 26 160-185 8-33 (854)
254 TIGR02632 RhaD_aldol-ADH rhamn 58.7 35 0.00076 37.8 8.1 32 153-185 416-447 (676)
255 PRK12826 3-ketoacyl-(acyl-carr 57.1 11 0.00025 34.7 3.5 26 13-38 14-39 (251)
256 PRK07814 short chain dehydroge 57.1 11 0.00024 35.7 3.4 26 13-38 18-43 (263)
257 COG0373 HemA Glutamyl-tRNA red 57.0 47 0.001 34.8 8.2 108 160-319 185-292 (414)
258 TIGR01181 dTDP_gluc_dehyt dTDP 56.8 32 0.00069 32.9 6.6 77 160-274 7-85 (317)
259 PRK08219 short chain dehydroge 56.7 38 0.00082 30.7 6.9 25 160-185 11-35 (227)
260 PRK06924 short chain dehydroge 56.6 13 0.00028 34.6 3.8 27 160-186 9-35 (251)
261 PLN00016 RNA-binding protein; 56.6 11 0.00024 38.1 3.6 28 13-40 64-91 (378)
262 PRK07041 short chain dehydroge 56.6 12 0.00025 34.4 3.4 26 13-38 5-30 (230)
263 PRK08177 short chain dehydroge 56.3 13 0.00027 34.3 3.6 27 13-39 9-35 (225)
264 PRK12828 short chain dehydroge 55.7 12 0.00026 34.2 3.3 26 13-38 15-40 (239)
265 PRK07774 short chain dehydroge 55.4 12 0.00027 34.7 3.4 30 8-38 10-39 (250)
266 PF00070 Pyr_redox: Pyridine n 55.3 20 0.00043 27.8 4.1 28 161-188 7-34 (80)
267 PRK06101 short chain dehydroge 55.2 12 0.00026 34.9 3.3 26 13-38 9-34 (240)
268 PRK07819 3-hydroxybutyryl-CoA 55.1 14 0.00031 36.3 3.9 37 4-40 3-39 (286)
269 PRK08324 short chain dehydroge 55.0 41 0.00088 37.2 7.8 31 154-185 425-455 (681)
270 PRK12429 3-hydroxybutyrate deh 54.9 12 0.00026 34.8 3.2 30 8-38 8-37 (258)
271 TIGR03649 ergot_EASG ergot alk 54.9 12 0.00026 35.8 3.3 28 13-40 7-34 (285)
272 PLN02583 cinnamoyl-CoA reducta 54.8 12 0.00026 36.4 3.4 26 13-38 14-39 (297)
273 PF01370 Epimerase: NAD depend 54.7 15 0.00031 33.6 3.7 31 13-43 6-36 (236)
274 PRK14194 bifunctional 5,10-met 54.7 13 0.00028 37.3 3.5 26 14-39 168-193 (301)
275 PRK07666 fabG 3-ketoacyl-(acyl 54.3 13 0.00029 34.3 3.4 30 8-38 11-40 (239)
276 PRK05557 fabG 3-ketoacyl-(acyl 54.2 13 0.00029 34.1 3.4 30 8-38 9-38 (248)
277 PRK07063 short chain dehydroge 54.1 13 0.00029 34.9 3.4 30 8-38 11-40 (260)
278 PF03807 F420_oxidored: NADP o 54.1 17 0.00037 28.9 3.6 25 160-184 6-33 (96)
279 PLN02695 GDP-D-mannose-3',5'-e 54.0 45 0.00098 33.7 7.5 35 151-185 20-54 (370)
280 PRK07041 short chain dehydroge 54.0 16 0.00034 33.5 3.8 26 160-185 5-30 (230)
281 TIGR03466 HpnA hopanoid-associ 53.7 15 0.00033 35.4 3.9 28 13-40 8-35 (328)
282 TIGR03325 BphB_TodD cis-2,3-di 53.7 13 0.00028 35.1 3.3 30 8-38 9-38 (262)
283 PF03446 NAD_binding_2: NAD bi 53.2 14 0.0003 32.9 3.2 25 14-38 9-33 (163)
284 PRK08265 short chain dehydroge 53.2 14 0.0003 35.0 3.4 32 6-38 8-39 (261)
285 PRK06841 short chain dehydroge 53.2 14 0.0003 34.5 3.3 26 14-39 24-49 (255)
286 PRK06483 dihydromonapterin red 52.9 15 0.00031 34.0 3.4 27 13-39 10-36 (236)
287 PRK08339 short chain dehydroge 52.8 15 0.00031 35.1 3.5 30 8-38 12-41 (263)
288 PRK07523 gluconate 5-dehydroge 52.7 14 0.00031 34.6 3.4 26 13-38 18-43 (255)
289 PRK06101 short chain dehydroge 52.6 17 0.00036 33.9 3.8 26 160-185 9-34 (240)
290 PRK08159 enoyl-(acyl carrier p 52.5 14 0.0003 35.5 3.4 32 7-38 13-45 (272)
291 PRK07326 short chain dehydroge 52.5 15 0.00033 33.8 3.4 26 13-38 14-39 (237)
292 PRK07577 short chain dehydroge 52.5 16 0.00035 33.5 3.6 28 13-40 11-38 (234)
293 PRK05653 fabG 3-ketoacyl-(acyl 51.9 14 0.00031 33.7 3.2 31 8-39 9-39 (246)
294 PRK08945 putative oxoacyl-(acy 51.7 15 0.00032 34.3 3.2 27 13-39 20-46 (247)
295 PRK08177 short chain dehydroge 51.6 18 0.00038 33.3 3.8 27 160-186 9-35 (225)
296 PRK12320 hypothetical protein; 51.6 40 0.00086 37.7 7.0 26 160-185 8-33 (699)
297 COG1086 Predicted nucleoside-d 51.5 49 0.0011 36.1 7.4 102 77-186 169-284 (588)
298 PRK06179 short chain dehydroge 51.4 15 0.00033 34.7 3.4 31 8-39 8-38 (270)
299 PRK08594 enoyl-(acyl carrier p 51.4 15 0.00033 34.9 3.4 31 8-38 11-42 (257)
300 PRK08416 7-alpha-hydroxysteroi 51.3 14 0.00031 34.9 3.1 26 13-38 16-41 (260)
301 CHL00194 ycf39 Ycf39; Provisio 51.3 13 0.00029 36.5 3.0 28 13-40 8-35 (317)
302 PRK06523 short chain dehydroge 51.2 16 0.00035 34.2 3.5 31 8-39 13-43 (260)
303 PRK08643 acetoin reductase; Va 51.2 16 0.00035 34.1 3.5 30 8-38 6-35 (256)
304 TIGR01832 kduD 2-deoxy-D-gluco 51.1 15 0.00031 34.2 3.1 25 14-38 14-38 (248)
305 PRK08226 short chain dehydroge 51.1 15 0.00032 34.5 3.3 30 8-38 10-39 (263)
306 TIGR01777 yfcH conserved hypot 51.1 18 0.00039 34.3 3.9 31 13-43 6-36 (292)
307 PRK07478 short chain dehydroge 51.0 16 0.00035 34.2 3.4 25 14-38 15-39 (254)
308 cd01134 V_A-ATPase_A V/A-type 50.8 17 0.00037 37.4 3.7 27 161-187 238-264 (369)
309 KOG1208|consensus 50.8 53 0.0012 33.0 7.2 33 153-186 37-69 (314)
310 PRK05875 short chain dehydroge 50.7 16 0.00034 34.7 3.3 30 8-38 11-40 (276)
311 COG1090 Predicted nucleoside-d 50.7 23 0.00049 35.3 4.4 28 160-187 6-33 (297)
312 PRK07454 short chain dehydroge 50.5 16 0.00035 33.8 3.4 31 8-39 10-40 (241)
313 PRK06196 oxidoreductase; Provi 50.4 16 0.00035 35.8 3.5 26 13-38 34-59 (315)
314 PRK12823 benD 1,6-dihydroxycyc 50.3 17 0.00036 34.1 3.4 26 13-38 16-41 (260)
315 PRK07023 short chain dehydroge 50.2 18 0.00039 33.6 3.6 27 13-39 9-35 (243)
316 TIGR01963 PHB_DH 3-hydroxybuty 50.2 17 0.00036 33.7 3.4 30 8-38 5-34 (255)
317 PF03446 NAD_binding_2: NAD bi 50.2 21 0.00045 31.8 3.8 25 161-185 9-33 (163)
318 PRK06114 short chain dehydroge 50.1 18 0.00038 34.0 3.6 33 6-39 10-42 (254)
319 cd06353 PBP1_BmpA_Med_like Per 50.0 2.2E+02 0.0047 27.3 11.2 32 153-184 156-187 (258)
320 PRK09072 short chain dehydroge 49.9 17 0.00037 34.3 3.4 26 13-38 13-38 (263)
321 TIGR01214 rmlD dTDP-4-dehydror 49.8 15 0.00032 35.0 3.0 26 13-38 7-32 (287)
322 PRK06182 short chain dehydroge 49.8 17 0.00037 34.5 3.5 30 9-39 8-37 (273)
323 KOG1372|consensus 49.8 18 0.00038 35.7 3.4 38 5-43 29-66 (376)
324 KOG2304|consensus 49.8 37 0.00079 33.2 5.5 36 151-186 9-44 (298)
325 PRK07102 short chain dehydroge 49.6 16 0.00036 33.8 3.2 27 13-39 9-35 (243)
326 PLN02583 cinnamoyl-CoA reducta 49.5 19 0.00041 35.0 3.8 26 160-185 14-39 (297)
327 PRK05867 short chain dehydroge 49.3 17 0.00036 34.1 3.2 30 8-38 13-42 (253)
328 PRK13394 3-hydroxybutyrate deh 49.2 17 0.00038 33.8 3.3 26 13-38 15-40 (262)
329 PRK10538 malonic semialdehyde 49.1 18 0.00039 33.9 3.4 26 13-38 8-33 (248)
330 PRK08690 enoyl-(acyl carrier p 49.1 17 0.00036 34.6 3.3 31 8-38 10-41 (261)
331 PRK07533 enoyl-(acyl carrier p 49.0 23 0.0005 33.6 4.2 31 8-38 14-45 (258)
332 PRK08628 short chain dehydroge 49.0 16 0.00035 34.2 3.1 31 8-39 11-41 (258)
333 PF10727 Rossmann-like: Rossma 48.6 6.4 0.00014 34.4 0.3 27 12-38 16-42 (127)
334 KOG1209|consensus 48.6 29 0.00062 33.6 4.6 35 4-38 7-41 (289)
335 PRK06997 enoyl-(acyl carrier p 48.5 18 0.00038 34.5 3.3 31 8-38 10-41 (260)
336 PRK05884 short chain dehydroge 48.2 18 0.00039 33.6 3.3 26 13-38 8-33 (223)
337 PRK06500 short chain dehydroge 48.1 17 0.00038 33.5 3.2 26 13-38 14-39 (249)
338 PRK09135 pteridine reductase; 48.1 18 0.0004 33.2 3.3 27 13-39 14-40 (249)
339 TIGR01830 3oxo_ACP_reduc 3-oxo 48.0 19 0.00041 32.9 3.4 27 13-39 6-32 (239)
340 PRK06129 3-hydroxyacyl-CoA deh 47.9 16 0.00034 36.1 3.0 28 12-39 8-35 (308)
341 PLN02206 UDP-glucuronate decar 47.9 78 0.0017 33.2 8.3 45 141-185 106-152 (442)
342 PRK12367 short chain dehydroge 47.8 18 0.00039 34.4 3.3 27 13-39 22-48 (245)
343 PRK05786 fabG 3-ketoacyl-(acyl 47.8 19 0.00042 33.0 3.4 28 13-40 13-40 (238)
344 PRK07856 short chain dehydroge 47.8 19 0.00042 33.7 3.4 27 13-39 14-40 (252)
345 PRK07806 short chain dehydroge 47.7 19 0.00042 33.3 3.4 26 13-38 14-39 (248)
346 PRK07067 sorbitol dehydrogenas 47.6 19 0.00041 33.8 3.3 31 8-39 10-40 (257)
347 PRK06200 2,3-dihydroxy-2,3-dih 47.5 19 0.00042 33.9 3.4 30 8-38 10-39 (263)
348 PRK07890 short chain dehydroge 47.4 20 0.00044 33.4 3.5 26 13-38 13-38 (258)
349 PRK06057 short chain dehydroge 47.4 19 0.00042 33.7 3.4 26 13-38 15-40 (255)
350 PRK09186 flagellin modificatio 47.4 20 0.00042 33.4 3.4 32 6-38 6-37 (256)
351 TIGR01915 npdG NADPH-dependent 47.1 19 0.00041 33.7 3.3 26 13-38 8-33 (219)
352 PRK06138 short chain dehydroge 47.1 19 0.00042 33.3 3.3 30 8-38 9-38 (252)
353 PRK13656 trans-2-enoyl-CoA red 47.0 62 0.0013 33.8 7.1 27 156-184 46-74 (398)
354 cd01080 NAD_bind_m-THF_DH_Cycl 46.9 32 0.0007 31.3 4.6 59 161-287 52-111 (168)
355 PRK06077 fabG 3-ketoacyl-(acyl 46.8 21 0.00046 33.0 3.5 26 13-38 14-39 (252)
356 PRK07062 short chain dehydroge 46.7 20 0.00043 33.7 3.4 26 13-38 16-41 (265)
357 PRK08085 gluconate 5-dehydroge 46.7 20 0.00042 33.6 3.3 26 13-38 17-42 (254)
358 PRK06914 short chain dehydroge 46.6 20 0.00044 34.0 3.4 26 13-38 11-36 (280)
359 COG1089 Gmd GDP-D-mannose dehy 46.6 28 0.00061 35.0 4.3 28 161-188 11-38 (345)
360 PRK05993 short chain dehydroge 46.6 20 0.00043 34.3 3.3 26 13-38 12-37 (277)
361 PRK05786 fabG 3-ketoacyl-(acyl 46.3 25 0.00053 32.3 3.8 26 160-185 13-38 (238)
362 PRK06079 enoyl-(acyl carrier p 46.2 26 0.00055 33.1 4.0 31 8-38 11-42 (252)
363 PLN02260 probable rhamnose bio 46.2 38 0.00082 37.1 5.9 29 154-182 382-410 (668)
364 PRK06197 short chain dehydroge 46.1 21 0.00045 34.7 3.5 26 13-38 24-49 (306)
365 TIGR03649 ergot_EASG ergot alk 46.0 21 0.00046 34.1 3.5 27 160-186 7-33 (285)
366 PRK08213 gluconate 5-dehydroge 46.0 21 0.00045 33.5 3.3 30 8-38 16-45 (259)
367 PRK08251 short chain dehydroge 45.9 21 0.00046 33.1 3.4 30 8-38 6-35 (248)
368 PRK08703 short chain dehydroge 45.8 22 0.00048 32.9 3.5 26 13-38 14-39 (239)
369 PRK07069 short chain dehydroge 45.8 21 0.00046 33.0 3.3 25 14-38 8-32 (251)
370 PRK06947 glucose-1-dehydrogena 45.7 23 0.0005 32.8 3.6 26 13-38 10-35 (248)
371 PLN00016 RNA-binding protein; 45.6 19 0.00042 36.4 3.2 27 160-186 64-90 (378)
372 PLN02986 cinnamyl-alcohol dehy 45.6 21 0.00047 34.8 3.5 29 12-40 12-40 (322)
373 PLN02653 GDP-mannose 4,6-dehyd 45.5 23 0.00051 34.9 3.8 29 12-40 13-41 (340)
374 PRK08264 short chain dehydroge 45.2 19 0.00041 33.2 2.9 28 13-40 14-42 (238)
375 PRK12746 short chain dehydroge 45.2 22 0.00048 33.1 3.4 28 8-36 10-37 (254)
376 PRK07819 3-hydroxybutyryl-CoA 45.2 28 0.00062 34.2 4.3 35 152-186 4-38 (286)
377 PLN02780 ketoreductase/ oxidor 45.1 19 0.00042 35.7 3.1 26 13-38 61-86 (320)
378 PRK06194 hypothetical protein; 45.0 21 0.00045 34.0 3.3 26 13-38 14-39 (287)
379 PRK12937 short chain dehydroge 44.9 23 0.00049 32.7 3.4 25 14-38 14-38 (245)
380 PF02882 THF_DHG_CYH_C: Tetrah 44.7 62 0.0013 29.4 6.1 27 160-186 44-70 (160)
381 PRK09009 C factor cell-cell si 44.7 74 0.0016 29.2 6.8 25 160-184 8-34 (235)
382 PRK07035 short chain dehydroge 44.6 23 0.00049 33.0 3.4 30 8-38 12-41 (252)
383 PRK05884 short chain dehydroge 44.6 27 0.00059 32.4 3.8 26 160-185 8-33 (223)
384 PRK12384 sorbitol-6-phosphate 44.5 23 0.00049 33.2 3.4 26 13-38 10-35 (259)
385 PRK07984 enoyl-(acyl carrier p 44.5 29 0.00062 33.3 4.1 31 8-38 10-41 (262)
386 PRK12935 acetoacetyl-CoA reduc 44.5 22 0.00047 33.0 3.2 33 5-38 7-39 (247)
387 PRK06550 fabG 3-ketoacyl-(acyl 44.4 25 0.00054 32.3 3.6 27 13-39 13-39 (235)
388 PRK08263 short chain dehydroge 44.4 22 0.00048 33.9 3.3 30 8-38 7-36 (275)
389 PRK11150 rfaD ADP-L-glycero-D- 44.4 22 0.00047 34.5 3.3 27 13-39 7-33 (308)
390 PRK12745 3-ketoacyl-(acyl-carr 44.2 24 0.00051 32.9 3.4 30 8-38 6-35 (256)
391 PRK06603 enoyl-(acyl carrier p 44.2 30 0.00065 32.9 4.2 31 8-38 12-43 (260)
392 PRK06444 prephenate dehydrogen 44.0 22 0.00048 33.3 3.1 22 160-181 8-29 (197)
393 PRK06398 aldose dehydrogenase; 44.0 24 0.00051 33.4 3.4 27 13-39 14-40 (258)
394 PRK06124 gluconate 5-dehydroge 43.9 23 0.00049 33.1 3.3 30 8-38 15-44 (256)
395 PRK12481 2-deoxy-D-gluconate 3 43.9 22 0.00048 33.5 3.2 30 8-38 12-41 (251)
396 PRK07024 short chain dehydroge 43.7 24 0.00051 33.2 3.3 26 13-38 10-35 (257)
397 PRK06180 short chain dehydroge 43.7 23 0.00049 33.9 3.2 25 14-38 13-37 (277)
398 PRK12939 short chain dehydroge 43.7 24 0.00053 32.5 3.4 31 7-38 10-40 (250)
399 PRK08303 short chain dehydroge 43.7 36 0.00079 33.5 4.8 33 152-185 9-41 (305)
400 PRK08303 short chain dehydroge 43.6 23 0.0005 34.9 3.4 31 8-39 12-42 (305)
401 PRK08267 short chain dehydroge 43.6 23 0.00051 33.2 3.3 26 13-38 9-34 (260)
402 PRK05717 oxidoreductase; Valid 43.5 23 0.00049 33.2 3.2 26 13-38 18-43 (255)
403 PRK07576 short chain dehydroge 43.5 23 0.0005 33.6 3.3 26 13-38 17-42 (264)
404 PRK12743 oxidoreductase; Provi 43.4 25 0.00055 33.0 3.5 30 8-38 6-35 (256)
405 PRK12748 3-ketoacyl-(acyl-carr 43.3 29 0.00063 32.5 3.9 31 8-38 9-40 (256)
406 PRK12825 fabG 3-ketoacyl-(acyl 43.3 24 0.00053 32.2 3.3 27 13-39 14-40 (249)
407 TIGR01831 fabG_rel 3-oxoacyl-( 43.2 23 0.00051 32.6 3.2 26 14-39 7-32 (239)
408 PRK06129 3-hydroxyacyl-CoA deh 43.2 24 0.00053 34.8 3.5 26 160-185 9-34 (308)
409 PRK05866 short chain dehydroge 43.1 23 0.0005 34.5 3.3 25 14-38 49-73 (293)
410 PF02719 Polysacc_synt_2: Poly 43.0 43 0.00093 33.5 5.1 25 161-185 7-32 (293)
411 PRK08642 fabG 3-ketoacyl-(acyl 42.8 26 0.00056 32.5 3.4 26 13-38 13-38 (253)
412 PRK10084 dTDP-glucose 4,6 dehy 42.7 75 0.0016 31.3 6.9 77 161-274 9-85 (352)
413 PRK08017 oxidoreductase; Provi 42.5 25 0.00055 32.7 3.3 26 14-39 11-36 (256)
414 PRK08277 D-mannonate oxidoredu 42.4 25 0.00055 33.3 3.4 30 8-38 14-43 (278)
415 PLN02253 xanthoxin dehydrogena 42.1 26 0.00057 33.3 3.4 26 13-38 26-51 (280)
416 PRK06171 sorbitol-6-phosphate 42.0 29 0.00062 32.7 3.6 32 8-40 13-44 (266)
417 PRK06463 fabG 3-ketoacyl-(acyl 42.0 28 0.0006 32.6 3.5 30 8-38 11-40 (255)
418 TIGR01915 npdG NADPH-dependent 42.0 30 0.00066 32.3 3.8 26 160-185 8-33 (219)
419 PRK08936 glucose-1-dehydrogena 42.0 27 0.00059 32.8 3.5 26 13-38 15-40 (261)
420 PRK08589 short chain dehydroge 42.0 26 0.00057 33.4 3.4 30 8-38 10-39 (272)
421 KOG0409|consensus 41.9 28 0.0006 35.1 3.6 32 151-185 36-67 (327)
422 PRK06172 short chain dehydroge 41.8 26 0.00056 32.7 3.3 27 13-39 15-41 (253)
423 PRK06128 oxidoreductase; Provi 41.7 28 0.0006 33.9 3.6 26 13-38 63-88 (300)
424 PLN00141 Tic62-NAD(P)-related 41.6 26 0.00057 33.0 3.3 29 12-40 24-52 (251)
425 TIGR02622 CDP_4_6_dhtase CDP-g 41.6 28 0.0006 34.6 3.6 28 13-40 12-39 (349)
426 PRK08278 short chain dehydroge 41.6 26 0.00057 33.4 3.4 31 8-39 10-40 (273)
427 PRK06949 short chain dehydroge 41.5 27 0.00058 32.5 3.3 27 13-39 17-43 (258)
428 PRK07825 short chain dehydroge 41.4 27 0.00059 33.0 3.4 26 13-38 13-38 (273)
429 PRK05854 short chain dehydroge 41.4 27 0.00058 34.4 3.4 30 8-38 18-47 (313)
430 PRK14188 bifunctional 5,10-met 41.3 26 0.00056 35.0 3.3 25 14-38 167-191 (296)
431 PRK08220 2,3-dihydroxybenzoate 41.1 26 0.00057 32.4 3.2 31 8-39 12-42 (252)
432 PRK12824 acetoacetyl-CoA reduc 41.1 28 0.00062 31.9 3.4 27 13-39 10-36 (245)
433 PLN02780 ketoreductase/ oxidor 41.1 28 0.0006 34.6 3.5 33 152-185 54-86 (320)
434 PF13450 NAD_binding_8: NAD(P) 41.0 40 0.00086 25.7 3.6 27 14-40 4-30 (68)
435 PRK07832 short chain dehydroge 41.0 28 0.0006 33.1 3.4 26 13-38 8-33 (272)
436 PRK07066 3-hydroxybutyryl-CoA 40.9 33 0.00071 34.6 4.0 34 152-185 6-39 (321)
437 KOG1372|consensus 40.9 39 0.00085 33.4 4.3 39 150-189 27-65 (376)
438 PF01210 NAD_Gly3P_dh_N: NAD-d 40.7 22 0.00049 31.5 2.5 28 12-39 5-32 (157)
439 PRK07370 enoyl-(acyl carrier p 40.6 31 0.00067 32.7 3.6 31 8-38 10-41 (258)
440 PRK06482 short chain dehydroge 40.5 28 0.00061 33.0 3.4 26 13-38 10-35 (276)
441 PRK07985 oxidoreductase; Provi 40.4 30 0.00064 33.7 3.5 26 13-38 57-82 (294)
442 PF02558 ApbA: Ketopantoate re 40.3 27 0.00059 30.1 3.0 27 13-39 5-31 (151)
443 PRK14175 bifunctional 5,10-met 40.3 42 0.00092 33.4 4.6 26 160-185 166-191 (286)
444 TIGR02279 PaaC-3OHAcCoADH 3-hy 40.3 24 0.00052 37.8 3.1 30 11-40 10-39 (503)
445 PLN00141 Tic62-NAD(P)-related 40.3 33 0.00072 32.3 3.8 35 151-185 16-50 (251)
446 PRK08415 enoyl-(acyl carrier p 40.2 30 0.00065 33.4 3.5 31 8-38 9-40 (274)
447 PRK05565 fabG 3-ketoacyl-(acyl 40.2 28 0.00061 32.0 3.2 26 13-38 13-39 (247)
448 PRK12428 3-alpha-hydroxysteroi 40.2 41 0.00088 31.5 4.4 18 168-185 1-18 (241)
449 PRK08862 short chain dehydroge 40.2 33 0.00072 32.1 3.7 30 8-38 9-38 (227)
450 PRK12827 short chain dehydroge 40.0 28 0.00061 32.0 3.2 26 13-38 14-39 (249)
451 PLN02989 cinnamyl-alcohol dehy 40.0 29 0.00062 33.9 3.4 27 13-39 13-39 (325)
452 PLN02986 cinnamyl-alcohol dehy 39.9 33 0.00072 33.4 3.8 29 158-186 11-39 (322)
453 PRK14179 bifunctional 5,10-met 39.7 29 0.00063 34.5 3.3 26 14-39 167-192 (284)
454 TIGR03206 benzo_BadH 2-hydroxy 39.6 29 0.00064 32.0 3.3 26 13-38 11-36 (250)
455 PRK07066 3-hydroxybutyryl-CoA 39.6 33 0.00072 34.6 3.8 34 5-38 6-39 (321)
456 PRK08217 fabG 3-ketoacyl-(acyl 39.6 31 0.00066 31.8 3.4 30 8-38 9-38 (253)
457 PLN02657 3,8-divinyl protochlo 39.6 28 0.0006 35.7 3.3 29 12-40 67-95 (390)
458 KOG2304|consensus 39.5 27 0.00057 34.1 2.9 36 4-39 9-44 (298)
459 TIGR02685 pter_reduc_Leis pter 39.5 28 0.00061 32.9 3.2 30 8-38 5-34 (267)
460 PRK12938 acetyacetyl-CoA reduc 39.4 30 0.00064 32.0 3.3 26 13-38 11-36 (246)
461 KOG0409|consensus 39.4 18 0.00039 36.4 1.8 32 13-44 42-74 (327)
462 PRK05876 short chain dehydroge 39.4 30 0.00066 33.2 3.4 30 8-38 10-39 (275)
463 PRK06935 2-deoxy-D-gluconate 3 39.1 30 0.00064 32.5 3.2 25 14-38 24-48 (258)
464 COG1250 FadB 3-hydroxyacyl-CoA 39.1 26 0.00057 35.2 3.0 30 9-38 6-35 (307)
465 PRK14618 NAD(P)H-dependent gly 38.9 28 0.00061 34.6 3.2 27 12-38 10-36 (328)
466 PRK09730 putative NAD(P)-bindi 38.9 32 0.0007 31.6 3.4 26 13-38 9-34 (247)
467 PRK09291 short chain dehydroge 38.8 32 0.00069 32.0 3.4 26 13-38 10-35 (257)
468 PF01210 NAD_Gly3P_dh_N: NAD-d 38.8 29 0.00064 30.7 3.0 27 159-185 5-31 (157)
469 PF05368 NmrA: NmrA-like famil 38.7 26 0.00056 32.5 2.7 27 13-39 6-32 (233)
470 PRK14619 NAD(P)H-dependent gly 38.4 30 0.00065 34.1 3.3 27 13-39 11-37 (308)
471 PRK07453 protochlorophyllide o 38.3 32 0.00069 33.8 3.4 26 13-38 14-39 (322)
472 TIGR01472 gmd GDP-mannose 4,6- 38.1 35 0.00076 33.7 3.7 28 13-40 8-35 (343)
473 COG1250 FadB 3-hydroxyacyl-CoA 38.0 26 0.00057 35.2 2.8 28 158-185 8-35 (307)
474 PLN02650 dihydroflavonol-4-red 37.9 30 0.00065 34.3 3.2 28 13-40 13-40 (351)
475 TIGR01829 AcAcCoA_reduct aceto 37.9 32 0.0007 31.5 3.2 25 14-38 9-33 (242)
476 PLN02545 3-hydroxybutyryl-CoA 37.9 30 0.00065 33.8 3.1 31 9-39 7-37 (295)
477 PRK12744 short chain dehydroge 37.6 35 0.00075 32.0 3.4 30 8-38 12-41 (257)
478 PRK07530 3-hydroxybutyryl-CoA 37.5 31 0.00066 33.7 3.1 30 9-38 7-36 (292)
479 PRK07904 short chain dehydroge 37.4 35 0.00075 32.3 3.4 27 13-39 16-43 (253)
480 PRK12829 short chain dehydroge 37.3 34 0.00074 31.9 3.3 26 14-39 20-45 (264)
481 PLN02545 3-hydroxybutyryl-CoA 37.2 37 0.00079 33.2 3.6 27 159-185 10-36 (295)
482 PRK07530 3-hydroxybutyryl-CoA 37.1 37 0.00081 33.1 3.7 29 157-185 8-36 (292)
483 PF01488 Shikimate_DH: Shikima 37.0 1.3E+02 0.0027 26.0 6.6 26 160-185 19-45 (135)
484 PRK06181 short chain dehydroge 37.0 34 0.00073 32.1 3.2 26 13-38 9-34 (263)
485 PLN00198 anthocyanidin reducta 37.0 32 0.0007 33.8 3.2 28 13-40 17-44 (338)
486 TIGR02279 PaaC-3OHAcCoADH 3-hy 37.0 34 0.00074 36.6 3.6 30 156-185 8-37 (503)
487 PRK09260 3-hydroxybutyryl-CoA 37.0 29 0.00063 33.8 2.9 29 10-38 5-33 (288)
488 PRK06953 short chain dehydroge 36.9 36 0.00078 31.2 3.4 26 14-39 10-35 (222)
489 PLN02662 cinnamyl-alcohol dehy 36.7 31 0.00068 33.4 3.1 28 13-40 12-39 (322)
490 PF02608 Bmp: Basic membrane p 36.6 1.8E+02 0.004 28.6 8.5 34 152-185 164-197 (306)
491 PRK09242 tropinone reductase; 36.5 36 0.00078 31.8 3.4 25 14-38 18-42 (257)
492 PRK06444 prephenate dehydrogen 36.5 31 0.00068 32.3 2.9 21 13-33 8-28 (197)
493 PRK05650 short chain dehydroge 36.4 37 0.0008 32.1 3.5 26 13-38 8-33 (270)
494 PF00106 adh_short: short chai 36.2 45 0.00098 28.7 3.7 26 13-38 8-33 (167)
495 PRK05693 short chain dehydroge 36.1 36 0.00077 32.3 3.3 26 13-38 9-34 (274)
496 PRK07677 short chain dehydroge 35.8 38 0.00082 31.6 3.4 25 14-38 10-34 (252)
497 PRK14620 NAD(P)H-dependent gly 35.7 34 0.00074 33.9 3.2 27 12-38 6-32 (326)
498 KOG1201|consensus 35.7 1.9E+02 0.004 29.2 8.2 31 154-185 41-71 (300)
499 PRK12747 short chain dehydroge 35.7 39 0.00085 31.5 3.5 29 8-37 8-36 (252)
500 PLN02989 cinnamyl-alcohol dehy 35.7 41 0.00089 32.8 3.7 27 159-185 12-38 (325)
No 1
>KOG2728|consensus
Probab=100.00 E-value=1.1e-73 Score=533.15 Aligned_cols=253 Identities=51% Similarity=0.880 Sum_probs=234.7
Q ss_pred CCccceeeeecCCcccchHHHHHHHHHCCCeEEEEeecCCCCCccccCCCcccccccccCCCC-CCceecCCCcccchHH
Q psy14323 1 MEHNTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRNNSIRPYIRHFSGATFLDCLQVSADN-PDTISVKPEVVPKLRP 79 (400)
Q Consensus 1 LE~~~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~~~~pf~r~~~~~~~ld~l~~~~~~-~~~~~~~~~~~~~~~~ 79 (400)
||+|+||||||||+|+||+++||||+++||+|||+||..|++||+||||+.+++++|+..+++ .+.|...|...+.+.+
T Consensus 45 LE~ntVRFiDNFSaGtRGAaSAE~Fl~agYaVIFl~R~~Sl~Py~R~f~~~~~~~~l~~~g~~~~~~i~~~e~~~~vf~~ 124 (302)
T KOG2728|consen 45 LEQNTVRFIDNFSAGTRGAASAEYFLAAGYAVIFLYRERSLFPYTRHFPGQTWFLFLRPSGSALSGLIEKEENALPVFAE 124 (302)
T ss_pred cccCceEeeeccCcCCccchhHHHHHhCCceEEEEeeccccccccccCCCchhhhhhccCCcccccceecCchhhHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999997554 4456667777888999
Q ss_pred HHHHHHhhhhcCceEEEeccCHHHHHHHHHHHHHHHhhccChHHHHHHHHHHhhcCCCCcCCCCceeecccCceeEEecC
Q psy14323 80 ILDRYARVKRDSLLLSVEFTTLAEYLWLLRTVCESLQDEGNRVLLYLAAAVADFYIPADQMSGGTTVPMEHNTVRFVDNF 159 (400)
Q Consensus 80 ~~~~y~~~~~~~~Ll~i~f~Tv~eYl~~L~~i~~~l~~~~~~~~~~laaaVsd~~~p~~~~~G~t~~~l~~d~VRfIdNf 159 (400)
++..|+.+...+.||.|||+|+.||+++|+.||++|++
T Consensus 125 ~~~~~k~~~k~~~lL~vpFtT~~~Yl~~L~aiae~Ln~------------------------------------------ 162 (302)
T KOG2728|consen 125 ALEKYKYAEKAGTLLYVPFTTLADYLWLLRAIAEALNP------------------------------------------ 162 (302)
T ss_pred HHHHHHHHHhhCcEEEEecchHHHHHHHHHHHHHHhcc------------------------------------------
Confidence 99999999889999999999999999999999887654
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHHHhhhhcccCCCCceEEEeec
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMVSTCVES 239 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 239 (400)
T Consensus 163 -------------------------------------------------------------------------------- 162 (302)
T KOG2728|consen 163 -------------------------------------------------------------------------------- 162 (302)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcceeeeecccCCccCCCCCCCCCCccCCCCCCeEEeeeCcchhhhcccccCCCcEEE
Q psy14323 240 AVHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMPEHKMQSGDGPPVISLQLVPKMLSPLTSVWSPRAFVV 319 (400)
Q Consensus 240 ~~~l~dyl~lL~~~~~~l~~~~~~di~i~AAAVSDF~vp~~~~~~~KI~S~~~~l~L~L~~~PKiL~~l~~~~~P~~~iV 319 (400)
++++.++|+||||||||||+++||+|||+|+++++.|+|.++||||..++..|.|+++||
T Consensus 163 --------------------~~sramfYLAAAVSDFyVP~~~mpeHKIqSg~~~l~i~l~~VPK~L~~Lv~~WaP~Afii 222 (302)
T KOG2728|consen 163 --------------------LGSRAMFYLAAAVSDFYVPESEMPEHKIQSGSGPLQITLKPVPKMLSPLVSDWAPKAFII 222 (302)
T ss_pred --------------------ccchHHHHHHHHhcccccChhhcchhhcccCCCCceEEeccchHHHHHHHHhhCcceEEE
Confidence 556677888999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHHHHHHHhcCCcEEEEecCCcceeEEEEEeCCCeeeecCChhhhcchHHHHHHHHHHHHHHHHhhhc
Q psy14323 320 SFKLETDPNILVKKARAALDKYHHKLVIGNLLHTRKHQVILVSAEAEVPITLSEEDKASGVEIEKYLVQEVTRRHEAFRD 399 (400)
Q Consensus 320 gFKLEtd~~~Li~kA~~~L~~~~~D~VVaN~l~~~~~~V~iv~~~~~~~i~~sk~~~~~~~eIe~~Iv~~l~~~h~~~~~ 399 (400)
|||||||+++||.||+.+|++|+|++||||+|++|+++|++|+++..+++.+++.+. -||+.|++.++.+|.+||+
T Consensus 223 SFKLETDesiLi~KAr~AL~kY~HqlVIAN~LsTRk~~V~fVt~~~~~~~~l~~~~~----~IE~~ii~~vv~rH~~~I~ 298 (302)
T KOG2728|consen 223 SFKLETDESILINKARKALEKYKHQLVIANLLSTRKSRVVFVTKNIVQWLELDKAPG----AIEDSIIKLVVSRHKEFID 298 (302)
T ss_pred EEEecCChHHHHHHHHHHHHHhCceeeeeehhhhcceeEEEEecCcceeeecccccc----hhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988777777777643 3999999999999999995
No 2
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=100.00 E-value=2.7e-46 Score=344.67 Aligned_cols=169 Identities=28% Similarity=0.415 Sum_probs=136.1
Q ss_pred CCCCceeecccCceeEEecCCCChhHHHHHHHHHHCCCEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHH
Q psy14323 140 MSGGTTVPMEHNTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLA 219 (400)
Q Consensus 140 ~~G~t~~~l~~d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
|+|||.||| |+||||||+|||+||.+||++|+++||+|+++||+...
T Consensus 9 TaG~T~E~i--D~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~------------------------------- 55 (185)
T PF04127_consen 9 TAGPTREPI--DPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSL------------------------------- 55 (185)
T ss_dssp EESB-EEES--SSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------------------------
T ss_pred ECCCccccC--CCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccc-------------------------------
Confidence 899999999 99999999999999999999999999999999998543
Q ss_pred HhhhhcccCCCCceEEEeecHHHHHHHHHHHHHHHHHhhcCCCcceeeeecccCCccCCCCCCCCCCccC-CCCCCeEEe
Q psy14323 220 AAVADFYIPADQMVSTCVESAVHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMPEHKMQS-GDGPPVISL 298 (400)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~s~~~l~dyl~lL~~~~~~l~~~~~~di~i~AAAVSDF~vp~~~~~~~KI~S-~~~~l~L~L 298 (400)
.+|.++..+.++|+++|.+.+. +..+.+|++|||||||||+ |.. ..++||+| ++++++|+|
T Consensus 56 -------~~p~~~~~i~v~sa~em~~~~~---------~~~~~~Di~I~aAAVsDf~-p~~-~~~~KIkK~~~~~l~l~L 117 (185)
T PF04127_consen 56 -------PPPPGVKVIRVESAEEMLEAVK---------ELLPSADIIIMAAAVSDFR-PEE-PAEGKIKKSSGDELTLEL 117 (185)
T ss_dssp ----------TTEEEEE-SSHHHHHHHHH---------HHGGGGSEEEE-SB--SEE-ESC-HHSS-G---TT-CEEEEE
T ss_pred -------cccccceEEEecchhhhhhhhc---------cccCcceeEEEecchhhee-ehh-ccccccccccCcceEEEE
Confidence 1356788999999999998873 3356789999999999999 554 67899996 456899999
Q ss_pred eeCcchhhhcccccCCCcEEEEEeccCCChHHHHHHHHHHHhcCCcEEEEecCC-------cceeEEEEE
Q psy14323 299 QLVPKMLSPLTSVWSPRAFVVSFKLETDPNILVKKARAALDKYHHKLVIGNLLH-------TRKHQVILV 361 (400)
Q Consensus 299 ~~~PKiL~~l~~~~~P~~~iVgFKLEtd~~~Li~kA~~~L~~~~~D~VVaN~l~-------~~~~~V~iv 361 (400)
.+|||||+.|++.|.|+.++|||||||+ +++++|+++|++|++|+||||+++ ++.|+|+|+
T Consensus 118 ~~~pkIL~~l~~~~~~~~~lVGFkaEt~--~l~~~A~~kl~~k~~D~IVaN~~~~~~~gfg~~~n~~~ii 185 (185)
T PF04127_consen 118 KPTPKILAELRKNKKPNQFLVGFKAETE--ELIENAKEKLERKGADLIVANDLSQRGSGFGSDTNEVTII 185 (185)
T ss_dssp EE-GGHGCCHHHHCSTTTEEEEEEEESC--HHHHHHHHHHHHCT-SEEEEEEGCCCTSSSSSSEEEEEE-
T ss_pred EeChHHHHHHHhcccCCcEEEEEEecCC--cHHHHHHHHhHhhCCCEEEEeCCCcCCCCcCCCceEEEEC
Confidence 9999999999888999999999999996 699999999999999999999996 479999986
No 3
>PRK09620 hypothetical protein; Provisional
Probab=100.00 E-value=8.7e-42 Score=324.56 Aligned_cols=200 Identities=23% Similarity=0.343 Sum_probs=159.7
Q ss_pred CCCCceeecccCceeEEecCCCChhHHHHHHHHHHCCCEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHH
Q psy14323 140 MSGGTTVPMEHNTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLA 219 (400)
Q Consensus 140 ~~G~t~~~l~~d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
|+|||.|+| |+||||||+|||+||+++|++|+++||+|++++|.....+.
T Consensus 9 TaG~T~E~i--D~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---------------------------- 58 (229)
T PRK09620 9 TSGGCLEKW--DQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---------------------------- 58 (229)
T ss_pred eCCCccCCc--CCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc----------------------------
Confidence 999999999 99999999999999999999999999999999987432110
Q ss_pred HhhhhcccCCCCceEEEeecHHHHHHHHHHHHHHHHHhhcCCCcceeeeecccCCccCCCCCCC---------CCCccCC
Q psy14323 220 AAVADFYIPADQMVSTCVESAVHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMP---------EHKMQSG 290 (400)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~s~~~l~dyl~lL~~~~~~l~~~~~~di~i~AAAVSDF~vp~~~~~---------~~KI~S~ 290 (400)
..+.+...+.+++..+|.+.+. .+. ....+|++||+||||||++ .. .. ++||+|+
T Consensus 59 -------~~~~~~~~~~V~s~~d~~~~l~---~~~----~~~~~D~VIH~AAvsD~~~-~~-~~~~~~~~~~~~~Ki~~~ 122 (229)
T PRK09620 59 -------DINNQLELHPFEGIIDLQDKMK---SII----THEKVDAVIMAAAGSDWVV-DK-ICDQEGNVLDMNGKISSD 122 (229)
T ss_pred -------ccCCceeEEEEecHHHHHHHHH---HHh----cccCCCEEEECccccceec-cc-ccccccccccccCCCcCC
Confidence 0122445566788788876442 111 1246799999999999994 42 22 3599884
Q ss_pred CCCCeEEeeeCcchhhhcccccCCCcEEEEEeccCCC--hHHHHHHHHHHHhcCCcEEEEecCC---cceeEEEEEeCCC
Q psy14323 291 DGPPVISLQLVPKMLSPLTSVWSPRAFVVSFKLETDP--NILVKKARAALDKYHHKLVIGNLLH---TRKHQVILVSAEA 365 (400)
Q Consensus 291 ~~~l~L~L~~~PKiL~~l~~~~~P~~~iVgFKLEtd~--~~Li~kA~~~L~~~~~D~VVaN~l~---~~~~~V~iv~~~~ 365 (400)
++++|+|.||||||+.++ .|.|++++|||||||+. ++|+++|+++|++|++||||||+++ .+.++++||++++
T Consensus 123 -~~~~l~L~~~pdIl~~l~-~~~~~~~~vGFkaEt~~~~~~l~~~A~~kl~~k~~D~ivaN~~~~~~g~~~~~~ii~~~~ 200 (229)
T PRK09620 123 -IAPIIHFQKAPKVLKQIK-QWDPETVLVGFKLESDVNEEELFERAKNRMEEAKASVMIANSPHSLYSRGAMHYVIGQDG 200 (229)
T ss_pred -CCCeEEEEECcHHHHHHH-hhCCCCEEEEEEeccCCCHHHHHHHHHHHHHHcCCCEEEECCcccccCCCcEEEEEeCCC
Confidence 579999999999999996 47899999999999984 5799999999999999999999995 2445899999987
Q ss_pred eeeecCChhhhcchHHHHHHHHHHHHHH
Q psy14323 366 EVPITLSEEDKASGVEIEKYLVQEVTRR 393 (400)
Q Consensus 366 ~~~i~~sk~~~~~~~eIe~~Iv~~l~~~ 393 (400)
......+|. +|+..|++.+..+
T Consensus 201 ~~~~~~~K~------~iA~~i~~~i~~~ 222 (229)
T PRK09620 201 KGQLCNGKD------ETAKEIVKRLEVL 222 (229)
T ss_pred ccccCCCHH------HHHHHHHHHHHHh
Confidence 533234665 7999999998764
No 4
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=100.00 E-value=5e-42 Score=354.26 Aligned_cols=194 Identities=24% Similarity=0.349 Sum_probs=165.9
Q ss_pred CCCCceeecccCceeEEecCCCChhHHHHHHHHHHCCCEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHH
Q psy14323 140 MSGGTTVPMEHNTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLA 219 (400)
Q Consensus 140 ~~G~t~~~l~~d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
|+|||.|+| |+||||+|+|||+||.+||++++.+|++|++++|+...
T Consensus 262 TaGpT~E~I--DpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~------------------------------- 308 (475)
T PRK13982 262 TAGPTHEPI--DPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL------------------------------- 308 (475)
T ss_pred ecCCccccC--CcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC-------------------------------
Confidence 999999999 99999999999999999999999999999999998643
Q ss_pred HhhhhcccCCCCceEEEeecHHHHHHHHHHHHHHHHHhhcCCCcceeeeecccCCccCCCCCCCCCCccCCC-CCCeEEe
Q psy14323 220 AAVADFYIPADQMVSTCVESAVHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMPEHKMQSGD-GPPVISL 298 (400)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~s~~~l~dyl~lL~~~~~~l~~~~~~di~i~AAAVSDF~vp~~~~~~~KI~S~~-~~l~L~L 298 (400)
.+|.++..+.|+|+.+|.+.+. +.. ++|++|||||||||+ |.+ ..++||||++ +.++|+|
T Consensus 309 -------~~p~~v~~i~V~ta~eM~~av~---------~~~-~~Di~I~aAAVaDyr-p~~-~~~~KiKk~~~~~~~L~L 369 (475)
T PRK13982 309 -------ADPQGVKVIHVESARQMLAAVE---------AAL-PADIAIFAAAVADWR-VAT-EGGQKLKKGAAGPPPLQL 369 (475)
T ss_pred -------CCCCCceEEEecCHHHHHHHHH---------hhC-CCCEEEEecccccee-ecc-ccccccCcCCCCCceeee
Confidence 2356788899999999998773 223 379999999999999 554 7899999864 4678999
Q ss_pred eeCcchhhhccccc-CCCcEEEEEeccCCChHHHHHHHHHHHhcCCcEEEEecCC-------cceeEEEEEeCCCe----
Q psy14323 299 QLVPKMLSPLTSVW-SPRAFVVSFKLETDPNILVKKARAALDKYHHKLVIGNLLH-------TRKHQVILVSAEAE---- 366 (400)
Q Consensus 299 ~~~PKiL~~l~~~~-~P~~~iVgFKLEtd~~~Li~kA~~~L~~~~~D~VVaN~l~-------~~~~~V~iv~~~~~---- 366 (400)
.+|||||+.|++.+ .+..++||||+||++ |+++|++||++||+|+||||+++ ++.|+|+|+++++.
T Consensus 370 ~~nPDIL~~l~~~~~~~~~~lVGFaaEt~~--l~~~A~~KL~~K~~D~IvaN~v~~~~~gfg~d~n~v~ii~~~g~~~~~ 447 (475)
T PRK13982 370 VENPDILATISKLAENRPPLVIGFAAETEH--LIDNARAKLARKGCDWIVANDVSPATGVMGGDRNTVHLLSRDGDAEKV 447 (475)
T ss_pred eeCcHHHHHHhhhcccCCCEEEEEccCchh--HHHHHHHHHHHcCCCEEEEccCCcCCCCcCCCccEEEEEECCCCccce
Confidence 99999999998532 223699999999974 99999999999999999999994 58999999999873
Q ss_pred eeec-CChhhhcchHHHHHHHHHHHHHH
Q psy14323 367 VPIT-LSEEDKASGVEIEKYLVQEVTRR 393 (400)
Q Consensus 367 ~~i~-~sk~~~~~~~eIe~~Iv~~l~~~ 393 (400)
.+++ ++|. +|+..|++.+..+
T Consensus 448 ~~~~~~sK~------~iA~~Il~~i~~~ 469 (475)
T PRK13982 448 ESWPVMTKD------EVATALVARIAST 469 (475)
T ss_pred eEcCCCCHH------HHHHHHHHHHHHH
Confidence 3555 3665 7999999998643
No 5
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=100.00 E-value=6.4e-41 Score=318.64 Aligned_cols=198 Identities=29% Similarity=0.402 Sum_probs=163.3
Q ss_pred CCCCceeecccCceeEEecCCCChhHHHHHHHHHHCCCEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHH
Q psy14323 140 MSGGTTVPMEHNTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLA 219 (400)
Q Consensus 140 ~~G~t~~~l~~d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
|+|||.||| |+||||||+|||++|.++|++|+++||+|++++|+....+
T Consensus 6 T~G~T~e~i--D~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~----------------------------- 54 (229)
T PRK06732 6 TSGGTTEPI--DSVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP----------------------------- 54 (229)
T ss_pred cCCCccccc--CCceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-----------------------------
Confidence 899999999 9999999999999999999999999999999998632100
Q ss_pred HhhhhcccCCCCceEEEeecHHHHHHHHHHHHHHHHHhhcCCCcceeeeecccCCccCCCCC------------------
Q psy14323 220 AAVADFYIPADQMVSTCVESAVHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQ------------------ 281 (400)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~s~~~l~dyl~lL~~~~~~l~~~~~~di~i~AAAVSDF~vp~~~------------------ 281 (400)
.++.+...+.+++..+|.+.+. +..+..|++||+||++||. |...
T Consensus 55 -------~~~~~v~~i~v~s~~~m~~~l~---------~~~~~~DivIh~AAvsd~~-~~~~~~~~~~~~~~~v~~~~~~ 117 (229)
T PRK06732 55 -------EPHPNLSIIEIENVDDLLETLE---------PLVKDHDVLIHSMAVSDYT-PVYMTDLEEVSASDNLNEFLTK 117 (229)
T ss_pred -------CCCCCeEEEEEecHHHHHHHHH---------HHhcCCCEEEeCCccCCce-ehhhhhhhhhhhhhhhhhhhcc
Confidence 0123445566777777776552 2245789999999999987 5421
Q ss_pred -CCCCCccCCCCCCeEEeeeCcchhhhcccccCCCcEEEEEeccCC--ChHHHHHHHHHHHhcCCcEEEEecCC---cce
Q psy14323 282 -MPEHKMQSGDGPPVISLQLVPKMLSPLTSVWSPRAFVVSFKLETD--PNILVKKARAALDKYHHKLVIGNLLH---TRK 355 (400)
Q Consensus 282 -~~~~KI~S~~~~l~L~L~~~PKiL~~l~~~~~P~~~iVgFKLEtd--~~~Li~kA~~~L~~~~~D~VVaN~l~---~~~ 355 (400)
++++||+|+.++++|+|.||||||+.+++ |.|++++|||||||+ .++|+++|+++|++|+||+||||+++ ++.
T Consensus 118 ~~~~~Ki~~~~~~~~l~l~~~p~il~~~~~-~~~~~~~vgF~~e~~~~~~~l~~~a~~kl~~~~~d~vvaN~~~~~~~~~ 196 (229)
T PRK06732 118 QNTEAKISSASDYQVLFLKKTPKVISYVKK-WNPNITLVGFKLLVNVSKEELIKVARASLIKNQADYILANDLTDISADQ 196 (229)
T ss_pred ccccCCccCCCCceEEEEEEChHHHHHHHh-hCCCcEEEEEEeccCCCHHHHHHHHHHHHHHcCCCEEEEecccccCCCC
Confidence 25899999877799999999999999975 789999999999997 35799999999999999999999996 589
Q ss_pred eEEEEEeCCCeeeecCChhhhcchHHHHHHHHHHHHHH
Q psy14323 356 HQVILVSAEAEVPITLSEEDKASGVEIEKYLVQEVTRR 393 (400)
Q Consensus 356 ~~V~iv~~~~~~~i~~sk~~~~~~~eIe~~Iv~~l~~~ 393 (400)
|+++|+++++..+ ..+|. +|+..|++++...
T Consensus 197 ~~~~~i~~~~~~~-~~~K~------~~a~~i~~~~~~~ 227 (229)
T PRK06732 197 HKALLVSKNEVYT-AQTKE------EIADLLLERIEKY 227 (229)
T ss_pred cEEEEEeCCCeee-CCCHH------HHHHHHHHHHHhh
Confidence 9999999987532 14554 7999999998653
No 6
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=100.00 E-value=1.8e-39 Score=329.91 Aligned_cols=193 Identities=24% Similarity=0.355 Sum_probs=165.9
Q ss_pred CCCCceeecccCceeEEecCCCChhHHHHHHHHHHCCCEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHH
Q psy14323 140 MSGGTTVPMEHNTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLA 219 (400)
Q Consensus 140 ~~G~t~~~l~~d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
|+|+|.|+| |+||||||+|||+||.++|++|..+|++|+++||+...
T Consensus 191 t~g~t~E~i--D~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~------------------------------- 237 (390)
T TIGR00521 191 TAGPTREPI--DPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSL------------------------------- 237 (390)
T ss_pred ecCCccCCC--CceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCcc-------------------------------
Confidence 999999999 99999999999999999999999999999999997532
Q ss_pred HhhhhcccCCCCceEEEeecHHHHHHHHHHHHHHHHHhhcCCCcceeeeecccCCccCCCCCCCCCCccCCCCCCeEEee
Q psy14323 220 AAVADFYIPADQMVSTCVESAVHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMPEHKMQSGDGPPVISLQ 299 (400)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~s~~~l~dyl~lL~~~~~~l~~~~~~di~i~AAAVSDF~vp~~~~~~~KI~S~~~~l~L~L~ 299 (400)
.++.+...+.+++.++|.+.+. + ...+..|++|+|||||||+ |.. ..++||+|.+++++|+|.
T Consensus 238 -------~~~~~~~~~~v~~~~~~~~~~~------~--~~~~~~D~~i~~Aavsd~~-~~~-~~~~Ki~~~~~~~~l~L~ 300 (390)
T TIGR00521 238 -------LTPPGVKSIKVSTAEEMLEAAL------N--ELAKDFDIFISAAAVADFK-PKT-VFEGKIKKQGEELSLKLV 300 (390)
T ss_pred -------CCCCCcEEEEeccHHHHHHHHH------H--hhcccCCEEEEcccccccc-ccc-cccccccccCCceeEEEE
Confidence 1233556788889889865441 1 1246789999999999999 554 678999996567999999
Q ss_pred eCcchhhhcccccCCCcEEEEEeccCCChHHHHHHHHHHHhcCCcEEEEecCCc-----ceeEEEEEeCCCeeeecC-Ch
Q psy14323 300 LVPKMLSPLTSVWSPRAFVVSFKLETDPNILVKKARAALDKYHHKLVIGNLLHT-----RKHQVILVSAEAEVPITL-SE 373 (400)
Q Consensus 300 ~~PKiL~~l~~~~~P~~~iVgFKLEtd~~~Li~kA~~~L~~~~~D~VVaN~l~~-----~~~~V~iv~~~~~~~i~~-sk 373 (400)
||||||+.|++.| |+.++|||||||+.+ ++++|+++|++|++|+||||+++. ++|+++|+++++..+++. +|
T Consensus 301 ~~pdil~~l~~~~-~~~~lvgF~aEt~~~-l~~~A~~kl~~k~~D~ivaN~i~~~~fg~~~n~~~li~~~~~~~~~~~~K 378 (390)
T TIGR00521 301 KNPDIIAEVRKIK-KHQVIVGFKAETNDD-LIKYAKEKLKKKNLDMIVANDVSQRGFGSDENEVYIFSKHGHKELPLMSK 378 (390)
T ss_pred eCcHHHHHHHhhC-CCcEEEEEEcCCCcH-HHHHHHHHHHHcCCCEEEEccCCccccCCCCcEEEEEECCCeEEeCCCCH
Confidence 9999999999765 678999999999876 999999999999999999999964 899999999998666663 66
Q ss_pred hhhcchHHHHHHHHHHH
Q psy14323 374 EDKASGVEIEKYLVQEV 390 (400)
Q Consensus 374 ~~~~~~~eIe~~Iv~~l 390 (400)
. +|+..|++.+
T Consensus 379 ~------~iA~~i~~~~ 389 (390)
T TIGR00521 379 L------EVAERILDEI 389 (390)
T ss_pred H------HHHHHHHHHh
Confidence 5 7999999986
No 7
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=100.00 E-value=2.6e-39 Score=329.69 Aligned_cols=196 Identities=27% Similarity=0.395 Sum_probs=166.2
Q ss_pred CCCCceeecccCceeEEecCCCChhHHHHHHHHHHCCCEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHH
Q psy14323 140 MSGGTTVPMEHNTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLA 219 (400)
Q Consensus 140 ~~G~t~~~l~~d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
|+|||.|+| |+||||||+|||+||.++|++|+++|++|++++|+...
T Consensus 194 TgG~T~E~I--D~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~------------------------------- 240 (399)
T PRK05579 194 TAGPTREPI--DPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL------------------------------- 240 (399)
T ss_pred eCCCccccc--cceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-------------------------------
Confidence 999999999 99999999999999999999999999999999987432
Q ss_pred HhhhhcccCCCCceEEEeecHHHHHHHHHHHHHHHHHhhcCCCcceeeeecccCCccCCCCCCCCCCccCCCCCCeEEee
Q psy14323 220 AAVADFYIPADQMVSTCVESAVHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMPEHKMQSGDGPPVISLQ 299 (400)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~s~~~l~dyl~lL~~~~~~l~~~~~~di~i~AAAVSDF~vp~~~~~~~KI~S~~~~l~L~L~ 299 (400)
..+.+...+.+++.++|.+.+. +..+..|++|+||||+||+ |.. ..++||+|+++.++|+|.
T Consensus 241 -------~~~~~~~~~dv~~~~~~~~~v~---------~~~~~~DilI~~Aav~d~~-~~~-~~~~Kikk~~~~~~l~L~ 302 (399)
T PRK05579 241 -------PTPAGVKRIDVESAQEMLDAVL---------AALPQADIFIMAAAVADYR-PAT-VAEGKIKKGEGELTLELV 302 (399)
T ss_pred -------cCCCCcEEEccCCHHHHHHHHH---------HhcCCCCEEEEcccccccc-ccc-ccccCccCCCCCceEEEE
Confidence 1123445678888888887662 3367899999999999999 664 789999997557999999
Q ss_pred eCcchhhhcccccCCCcEEEEEeccCCChHHHHHHHHHHHhcCCcEEEEecCC------cceeEEEEEeCCCe-eeec-C
Q psy14323 300 LVPKMLSPLTSVWSPRAFVVSFKLETDPNILVKKARAALDKYHHKLVIGNLLH------TRKHQVILVSAEAE-VPIT-L 371 (400)
Q Consensus 300 ~~PKiL~~l~~~~~P~~~iVgFKLEtd~~~Li~kA~~~L~~~~~D~VVaN~l~------~~~~~V~iv~~~~~-~~i~-~ 371 (400)
+|||||+.|++.|.+.+++|||||||+. ++++|+++|++|++|+||||+++ +++|+++|+++++. .+++ .
T Consensus 303 ~~pdIl~~l~~~~~~~~~~VGFaaEt~~--~~~~A~~kl~~k~~D~ivaN~i~~~~~fg~~~n~~~ii~~~~~~~~~~~~ 380 (399)
T PRK05579 303 PNPDILAEVAALKDKRPFVVGFAAETGD--VLEYARAKLKRKGLDLIVANDVSAGGGFGSDDNEVTLIWSDGGEVKLPLM 380 (399)
T ss_pred eCcHHHHHHHhccCCCCEEEEEccCCch--HHHHHHHHHHHcCCeEEEEecCCcCCCcCCCceEEEEEECCCcEEEcCCC
Confidence 9999999998765333499999999985 79999999999999999999993 68999999999874 4565 3
Q ss_pred ChhhhcchHHHHHHHHHHHHHHH
Q psy14323 372 SEEDKASGVEIEKYLVQEVTRRH 394 (400)
Q Consensus 372 sk~~~~~~~eIe~~Iv~~l~~~h 394 (400)
+|. +|+..|++.+.++.
T Consensus 381 ~K~------~iA~~i~~~i~~~~ 397 (399)
T PRK05579 381 SKL------ELARRLLDEIAERL 397 (399)
T ss_pred CHH------HHHHHHHHHHHHHh
Confidence 665 79999999986543
No 8
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=100.00 E-value=1.2e-38 Score=302.77 Aligned_cols=196 Identities=29% Similarity=0.411 Sum_probs=155.3
Q ss_pred CCCCceeecccCceeEEecCCCChhHHHHHHHHHHCCCEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHH
Q psy14323 140 MSGGTTVPMEHNTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLA 219 (400)
Q Consensus 140 ~~G~t~~~l~~d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
|+|||.|+| |+||||||+|||.+|.++|++|+++||.|++++++....+
T Consensus 5 T~G~T~e~i--D~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l~~----------------------------- 53 (227)
T TIGR02114 5 TSGGTSEPI--DSVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRALKP----------------------------- 53 (227)
T ss_pred ccCCccCCC--CCceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhhccc-----------------------------
Confidence 899999999 9999999999999999999999999999999986421100
Q ss_pred HhhhhcccCCCCceEEEeecHHHHHHHHHHHHHHHHHhhcCCCcceeeeecccCCccCCCCCC-----------------
Q psy14323 220 AAVADFYIPADQMVSTCVESAVHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQM----------------- 282 (400)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~s~~~l~dyl~lL~~~~~~l~~~~~~di~i~AAAVSDF~vp~~~~----------------- 282 (400)
...........++..+|.+.+ .+..+..|++||+||++||. |...+
T Consensus 54 -------~~~~~~Dv~d~~s~~~l~~~v---------~~~~g~iDiLVnnAgv~d~~-~~~~~s~e~~~~~~~~~~~~~~ 116 (227)
T TIGR02114 54 -------EPHPNLSIREIETTKDLLITL---------KELVQEHDILIHSMAVSDYT-PVYMTDLEQVQASDNLNEFLSK 116 (227)
T ss_pred -------ccCCcceeecHHHHHHHHHHH---------HHHcCCCCEEEECCEecccc-chhhCCHHHHhhhcchhhhhcc
Confidence 000011122222333333222 23367889999999999998 54323
Q ss_pred --CCCCccCCCCCCeEEeeeCcchhhhcccccCCCcEEEEEeccCC--ChHHHHHHHHHHHhcCCcEEEEecC---Ccce
Q psy14323 283 --PEHKMQSGDGPPVISLQLVPKMLSPLTSVWSPRAFVVSFKLETD--PNILVKKARAALDKYHHKLVIGNLL---HTRK 355 (400)
Q Consensus 283 --~~~KI~S~~~~l~L~L~~~PKiL~~l~~~~~P~~~iVgFKLEtd--~~~Li~kA~~~L~~~~~D~VVaN~l---~~~~ 355 (400)
.++||+|+++.++|+|.||||||+.+++ |.|++++|||||||+ .++|+++|+++|++|+||+||||++ +++.
T Consensus 117 ~~~~~Ki~~~~~~~~l~l~~~p~il~~~~~-~~~~~~~vgF~~e~~~~~~~l~~~a~~kl~~~~~d~ivaN~~~~~~~~~ 195 (227)
T TIGR02114 117 QNHEAKISSTSEYQVLFLKKTPKVISLVKE-WNPQIHLVGFKLLVNVTQEELVKVARASLIKNQADFILANDLTDISADQ 195 (227)
T ss_pred ccccCCcccCCCceeEEEEEChHHHHHHHh-hCCCcEEEEEEeccCCCHHHHHHHHHHHHHHcCCCEEEEcchhhcCCCC
Confidence 4799999776799999999999999984 679999999999997 3579999999999999999999999 5799
Q ss_pred eEEEEEeCCCeeeec-CChhhhcchHHHHHHHHHHHHH
Q psy14323 356 HQVILVSAEAEVPIT-LSEEDKASGVEIEKYLVQEVTR 392 (400)
Q Consensus 356 ~~V~iv~~~~~~~i~-~sk~~~~~~~eIe~~Iv~~l~~ 392 (400)
|+++|+++++. ++ .+|. +|+..|++.+..
T Consensus 196 ~~~~li~~~~~--~~~~~k~------~ia~~i~~~~~~ 225 (227)
T TIGR02114 196 HKALLIEKNQV--QTAQTKE------EIAELLYEKVQK 225 (227)
T ss_pred ceEEEEeCCCe--eecCCHH------HHHHHHHHHHHh
Confidence 99999999873 33 4555 799999999854
No 9
>COG0452 Dfp Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism]
Probab=100.00 E-value=3.9e-34 Score=291.09 Aligned_cols=287 Identities=22% Similarity=0.248 Sum_probs=214.5
Q ss_pred ccceeeeecCCcccchHHHHHHHHHCCCeEEEEeecCCCCCccccCCCcccccccccCCCCCCceecCCCcccchHHHHH
Q psy14323 3 HNTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRNNSIRPYIRHFSGATFLDCLQVSADNPDTISVKPEVVPKLRPILD 82 (400)
Q Consensus 3 ~~~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~~~~pf~r~~~~~~~ld~l~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (400)
+..+++.||++|++.+++.++.++.-++.+++.+.+-.+.+..|..+.. ...+.|..... .
T Consensus 95 Kla~g~aD~~~t~~~~a~~~p~~~aPamn~~M~~~~~tq~n~~~l~~~g--------------~~~I~p~~~~~-a---- 155 (392)
T COG0452 95 KLAVGIADNLSTTTLLAAKAPLVLAPAMNVIMYTHPATQENLQRLKSEG--------------VLFIEPIEGEL-A---- 155 (392)
T ss_pred HHHHhhhccHHHHHHHHhcCcEEEecCcCHHHhhCHHHHHHHHHHHHCC--------------cEEECcccccc-c----
Confidence 4568999999999999999988888888888877665555543322100 00011100000 0
Q ss_pred HHHhhhhcCceEEEeccCHHHHHHHHHHHHHHHh---hccChHHHHHHHHHHhhcCCCCcCCCCceeecccCceeEEecC
Q psy14323 83 RYARVKRDSLLLSVEFTTLAEYLWLLRTVCESLQ---DEGNRVLLYLAAAVADFYIPADQMSGGTTVPMEHNTVRFVDNF 159 (400)
Q Consensus 83 ~y~~~~~~~~Ll~i~f~Tv~eYl~~L~~i~~~l~---~~~~~~~~~laaaVsd~~~p~~~~~G~t~~~l~~d~VRfIdNf 159 (400)
+.+.--. .|.......++..+. ..|+++++ |+|+|.+++ |+||||+|.
T Consensus 156 ------~~g~g~~------~e~~~Iv~~~~~~~~~~~l~gk~Vli---------------t~G~t~E~i--dpvr~itn~ 206 (392)
T COG0452 156 ------DVGDGRL------AEPEEIVEAALALLKTPDLKGKKVLI---------------TAGPTREYI--DPVRFISNR 206 (392)
T ss_pred ------ccccccC------CCHHHHHHHHHhhcccccccCcEEEe---------------cCCCCccCC--ccceeeecc
Confidence 0000000 111111111211111 23556666 899999999 999999999
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHHHhhhhcccCCCCceEEEeec
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMVSTCVES 239 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 239 (400)
|||+||.++|+.++++|+.|++++++... ..+.+...+.++|
T Consensus 207 ssGk~g~alA~a~~~~GA~V~lv~g~~~~--------------------------------------~~p~~v~~v~v~s 248 (392)
T COG0452 207 SSGKMGFALAAAAKRRGASVTLVSGPTSL--------------------------------------KIPAGVEVVKVES 248 (392)
T ss_pred ccccccHHHHHHHHHcCCceEEecCCCcC--------------------------------------CCCCcceeeeeee
Confidence 99999999999999999999999996543 2345556889999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcceeeeecccCCccCCCCCCCCCCccCCCCCCeEEeeeCcchhhhcccccCCCcEEE
Q psy14323 240 AVHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMPEHKMQSGDGPPVISLQLVPKMLSPLTSVWSPRAFVV 319 (400)
Q Consensus 240 ~~~l~dyl~lL~~~~~~l~~~~~~di~i~AAAVSDF~vp~~~~~~~KI~S~~~~l~L~L~~~PKiL~~l~~~~~P~~~iV 319 (400)
..+|.+... ......|+++++|||+||+ |.. .+++||+|..+++.|+|.++||||..++..|.+..++|
T Consensus 249 a~em~~av~---------~~~~~~d~~i~~aAvaD~~-~~~-~~~~Kikk~~~~~~l~l~~n~dil~~~~~~~~~~~~~V 317 (392)
T COG0452 249 AEEMLNAVL---------EAALPADIFISAAAVADYR-PKW-VAEAKIKKQGEPFKLELVPNPDILASVARDYPKKNILV 317 (392)
T ss_pred HHHHHHHHH---------hcccccCEEEEeccccccc-ccc-ccccceeecCCcceEEeccChhHHHHHHhhccCCCeEE
Confidence 999998773 3356799999999999999 554 79999999777899999999999999998764444899
Q ss_pred EEeccCCChHHHHHHHHHHHhcCCcEEEEecCC-----cceeEEEEEeCCCe-eeecC-ChhhhcchHHHHHHHHHHHHH
Q psy14323 320 SFKLETDPNILVKKARAALDKYHHKLVIGNLLH-----TRKHQVILVSAEAE-VPITL-SEEDKASGVEIEKYLVQEVTR 392 (400)
Q Consensus 320 gFKLEtd~~~Li~kA~~~L~~~~~D~VVaN~l~-----~~~~~V~iv~~~~~-~~i~~-sk~~~~~~~eIe~~Iv~~l~~ 392 (400)
||++||+. +++.|+++|+++++|++|+|+.+ +++|.++++++++. .+++. +|. +++..|++.+..
T Consensus 318 gfaaet~~--~~~~a~~kl~~k~~D~i~aNdv~~~~fg~d~n~~~~~~~d~~~~~~~~~~k~------~~a~~i~~~i~~ 389 (392)
T COG0452 318 GFAAETGD--IVEYAREKLERKNLDLIVANDVSEIGFGSDDNEVRIIDKDGEDVELPEMSKE------ELAERILDEIAE 389 (392)
T ss_pred EEeccchH--HHHHHHHhhhhcCCCeEEeccccccCCCCCccceEEecCCCCeeeccccCHH------HHHHHHHHHHHH
Confidence 99999998 99999999999999999999997 69999999999875 55654 555 788999999877
Q ss_pred HH
Q psy14323 393 RH 394 (400)
Q Consensus 393 ~h 394 (400)
++
T Consensus 390 ~~ 391 (392)
T COG0452 390 LL 391 (392)
T ss_pred hh
Confidence 64
No 10
>KOG2728|consensus
Probab=99.87 E-value=1.1e-22 Score=191.08 Aligned_cols=136 Identities=41% Similarity=0.668 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHhh-ccChHHHHHHHHHHhhcCCCCcCCCCceeecccCceeEEecCCCChhHHHHHHHHHHCCCEEEEEe
Q psy14323 105 LWLLRTVCESLQD-EGNRVLLYLAAAVADFYIPADQMSGGTTVPMEHNTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVY 183 (400)
Q Consensus 105 l~~L~~i~~~l~~-~~~~~~~~laaaVsd~~~p~~~~~G~t~~~l~~d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~ 183 (400)
...+.+.++.... .++|++++ |||||.+|||.|+||||||||+|+||+++||||++.||.|||+|
T Consensus 15 ~s~~~eFi~~q~s~~~rrIVlV--------------TSGGTtVPLE~ntVRFiDNFSaGtRGAaSAE~Fl~agYaVIFl~ 80 (302)
T KOG2728|consen 15 GSLIEEFIKLQASLQGRRIVLV--------------TSGGTTVPLEQNTVRFIDNFSAGTRGAASAEYFLAAGYAVIFLY 80 (302)
T ss_pred hHHHHHHHHHHhhccCceEEEE--------------ecCCeEeecccCceEeeeccCcCCccchhHHHHHhCCceEEEEe
Confidence 3344555544323 34567776 99999999999999999999999999999999999999999999
Q ss_pred cc--CchhhhhHHHHHHHH--HHHhhhh---hcCCchhHHHHHHhhhhcccCCCCceEEEeecHHHHHHHHHHHHHHHH
Q psy14323 184 ST--CVESAIHLAEYLWLL--RTVCESL---QDGGNRVLLYLAAAVADFYIPADQMVSTCVESAVHLAEYLWLLRTVCE 255 (400)
Q Consensus 184 ~~--~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~dyl~lL~~~~~ 255 (400)
|. +.|..+|++...|++ +..-... ...........+.+.+ +++..+.-..+....|.|+.||||+|+++|+
T Consensus 81 R~~Sl~Py~R~f~~~~~~~~l~~~g~~~~~~i~~~e~~~~vf~~~~~-~~k~~~k~~~lL~vpFtT~~~Yl~~L~aiae 158 (302)
T KOG2728|consen 81 RERSLFPYTRHFPGQTWFLFLRPSGSALSGLIEKEENALPVFAEALE-KYKYAEKAGTLLYVPFTTLADYLWLLRAIAE 158 (302)
T ss_pred eccccccccccCCCchhhhhhccCCcccccceecCchhhHHHHHHHH-HHHHHHhhCcEEEEecchHHHHHHHHHHHHH
Confidence 96 466777777655543 2111111 0111111112222222 2233322233444568899999999999997
No 11
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=99.46 E-value=2.3e-14 Score=132.46 Aligned_cols=80 Identities=26% Similarity=0.360 Sum_probs=59.0
Q ss_pred cceeeeecCCcccchHHHHHHHHHCCCeEEEEeecCCCCCccccCCCcccccccccCCCCCCceecCCCcccchHHHHHH
Q psy14323 4 NTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRNNSIRPYIRHFSGATFLDCLQVSADNPDTISVKPEVVPKLRPILDR 83 (400)
Q Consensus 4 ~~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~~~~pf~r~~~~~~~ld~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (400)
.+||||+|+|||+||.++|++|+.+||.|+++|++.+..| |
T Consensus 18 D~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~-----p---------------------------------- 58 (185)
T PF04127_consen 18 DPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPP-----P---------------------------------- 58 (185)
T ss_dssp SSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------------------------------------
T ss_pred CCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccc-----c----------------------------------
Confidence 3799999999999999999999999999999999965443 1
Q ss_pred HHhhhhcCceEEEeccCHHHHHHHHHHHHHHHhhccChHHHHHHHHHHhhcC
Q psy14323 84 YARVKRDSLLLSVEFTTLAEYLWLLRTVCESLQDEGNRVLLYLAAAVADFYI 135 (400)
Q Consensus 84 y~~~~~~~~Ll~i~f~Tv~eYl~~L~~i~~~l~~~~~~~~~~laaaVsd~~~ 135 (400)
..+-.+.++|..||+..++... .+..++++|||||||+.
T Consensus 59 -------~~~~~i~v~sa~em~~~~~~~~------~~~Di~I~aAAVsDf~p 97 (185)
T PF04127_consen 59 -------PGVKVIRVESAEEMLEAVKELL------PSADIIIMAAAVSDFRP 97 (185)
T ss_dssp -------TTEEEEE-SSHHHHHHHHHHHG------GGGSEEEE-SB--SEEE
T ss_pred -------ccceEEEecchhhhhhhhcccc------CcceeEEEecchhheee
Confidence 2467889999999999988653 34489999999999964
No 12
>PRK09620 hypothetical protein; Provisional
Probab=99.18 E-value=1.5e-11 Score=117.40 Aligned_cols=86 Identities=19% Similarity=0.249 Sum_probs=65.2
Q ss_pred cceeeeecCCcccchHHHHHHHHHCCCeEEEEeecCCCCCccccCCCcccccccccCCCCCCceecCCCcccchHHHHHH
Q psy14323 4 NTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRNNSIRPYIRHFSGATFLDCLQVSADNPDTISVKPEVVPKLRPILDR 83 (400)
Q Consensus 4 ~~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~~~~pf~r~~~~~~~ld~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (400)
.+||||||+|||.+|+++|++|+++||.|+++++..+..|. .++
T Consensus 18 D~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~--~~~---------------------------------- 61 (229)
T PRK09620 18 DQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN--DIN---------------------------------- 61 (229)
T ss_pred CCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc--ccC----------------------------------
Confidence 68999999999999999999999999999999987653331 111
Q ss_pred HHhhhhcCceEEEeccCHHHHHHHHHHHHHHHhhccChHHHHHHHHHHhhcCC
Q psy14323 84 YARVKRDSLLLSVEFTTLAEYLWLLRTVCESLQDEGNRVLLYLAAAVADFYIP 136 (400)
Q Consensus 84 y~~~~~~~~Ll~i~f~Tv~eYl~~L~~i~~~l~~~~~~~~~~laaaVsd~~~p 136 (400)
..+..++|++..|+...++.+.. .....+++.+|||+||..+
T Consensus 62 -------~~~~~~~V~s~~d~~~~l~~~~~----~~~~D~VIH~AAvsD~~~~ 103 (229)
T PRK09620 62 -------NQLELHPFEGIIDLQDKMKSIIT----HEKVDAVIMAAAGSDWVVD 103 (229)
T ss_pred -------CceeEEEEecHHHHHHHHHHHhc----ccCCCEEEECccccceecc
Confidence 12445678888888876655431 2245789999999999753
No 13
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=99.07 E-value=4.7e-11 Score=124.51 Aligned_cols=79 Identities=19% Similarity=0.248 Sum_probs=64.6
Q ss_pred cceeeeecCCcccchHHHHHHHHHCCCeEEEEeecCCCCCccccCCCcccccccccCCCCCCceecCCCcccchHHHHHH
Q psy14323 4 NTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRNNSIRPYIRHFSGATFLDCLQVSADNPDTISVKPEVVPKLRPILDR 83 (400)
Q Consensus 4 ~~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~~~~pf~r~~~~~~~ld~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (400)
.+||||+|+|||+||.++|++++.+|++|++||++.++.| |
T Consensus 271 DpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~~~-----p---------------------------------- 311 (475)
T PRK13982 271 DPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDLAD-----P---------------------------------- 311 (475)
T ss_pred CcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCCCC-----C----------------------------------
Confidence 3899999999999999999999999999999999865422 1
Q ss_pred HHhhhhcCceEEEeccCHHHHHHHHHHHHHHHhhccChHHHHHHHHHHhhcC
Q psy14323 84 YARVKRDSLLLSVEFTTLAEYLWLLRTVCESLQDEGNRVLLYLAAAVADFYI 135 (400)
Q Consensus 84 y~~~~~~~~Ll~i~f~Tv~eYl~~L~~i~~~l~~~~~~~~~~laaaVsd~~~ 135 (400)
..+-.++++|..|++..++... +.+++++||||+||..
T Consensus 312 -------~~v~~i~V~ta~eM~~av~~~~-------~~Di~I~aAAVaDyrp 349 (475)
T PRK13982 312 -------QGVKVIHVESARQMLAAVEAAL-------PADIAIFAAAVADWRV 349 (475)
T ss_pred -------CCceEEEecCHHHHHHHHHhhC-------CCCEEEEeccccceee
Confidence 1255688899999998876542 1478999999999964
No 14
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=98.82 E-value=2.4e-09 Score=109.67 Aligned_cols=80 Identities=28% Similarity=0.260 Sum_probs=61.7
Q ss_pred ceeeeecCCcccchHHHHHHHHHCCCeEEEEeecCCCCCccccCCCcccccccccCCCCCCceecCCCcccchHHHHHHH
Q psy14323 5 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRNNSIRPYIRHFSGATFLDCLQVSADNPDTISVKPEVVPKLRPILDRY 84 (400)
Q Consensus 5 ~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~~~~pf~r~~~~~~~ld~l~~~~~~~~~~~~~~~~~~~~~~~~~~y 84 (400)
+||||||+|||+||.++|++|+.+|+.|+++||+++..| +
T Consensus 201 ~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~-----~----------------------------------- 240 (390)
T TIGR00521 201 PVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT-----P----------------------------------- 240 (390)
T ss_pred ceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC-----C-----------------------------------
Confidence 899999999999999999999999999999999875422 1
Q ss_pred HhhhhcCceEEEeccCHHHHHHHHHHHHHHHhhccChHHHHHHHHHHhhcC
Q psy14323 85 ARVKRDSLLLSVEFTTLAEYLWLLRTVCESLQDEGNRVLLYLAAAVADFYI 135 (400)
Q Consensus 85 ~~~~~~~~Ll~i~f~Tv~eYl~~L~~i~~~l~~~~~~~~~~laaaVsd~~~ 135 (400)
..+..+.++|..|++..+... ..++-.+++++|||+||..
T Consensus 241 ------~~~~~~~v~~~~~~~~~~~~~-----~~~~~D~~i~~Aavsd~~~ 280 (390)
T TIGR00521 241 ------PGVKSIKVSTAEEMLEAALNE-----LAKDFDIFISAAAVADFKP 280 (390)
T ss_pred ------CCcEEEEeccHHHHHHHHHHh-----hcccCCEEEEccccccccc
Confidence 112346777888885543321 1345688999999999964
No 15
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.76 E-value=5.3e-09 Score=99.83 Aligned_cols=37 Identities=30% Similarity=0.422 Sum_probs=34.5
Q ss_pred ceeeeecCCcccchHHHHHHHHHCCCeEEEEeecCCC
Q psy14323 5 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRNNSI 41 (400)
Q Consensus 5 ~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~~~ 41 (400)
+||||||+|||++|.++|++|+++||.|++++|+.+.
T Consensus 16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~ 52 (229)
T PRK06732 16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV 52 (229)
T ss_pred CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccc
Confidence 7999999999999999999999999999999987543
No 16
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.75 E-value=5.1e-09 Score=107.58 Aligned_cols=79 Identities=22% Similarity=0.261 Sum_probs=62.3
Q ss_pred cceeeeecCCcccchHHHHHHHHHCCCeEEEEeecCCCCCccccCCCcccccccccCCCCCCceecCCCcccchHHHHHH
Q psy14323 4 NTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRNNSIRPYIRHFSGATFLDCLQVSADNPDTISVKPEVVPKLRPILDR 83 (400)
Q Consensus 4 ~~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~~~~pf~r~~~~~~~ld~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (400)
.+||||+|+|||+||.++|++|+++|+.|+++++..+..| +
T Consensus 203 D~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~-----~---------------------------------- 243 (399)
T PRK05579 203 DPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPT-----P---------------------------------- 243 (399)
T ss_pred cceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccC-----C----------------------------------
Confidence 4899999999999999999999999999999998754221 1
Q ss_pred HHhhhhcCceEEEeccCHHHHHHHHHHHHHHHhhccChHHHHHHHHHHhhc
Q psy14323 84 YARVKRDSLLLSVEFTTLAEYLWLLRTVCESLQDEGNRVLLYLAAAVADFY 134 (400)
Q Consensus 84 y~~~~~~~~Ll~i~f~Tv~eYl~~L~~i~~~l~~~~~~~~~~laaaVsd~~ 134 (400)
..+..++++|..|+...+.. ..+.-.+++++|+|+||.
T Consensus 244 -------~~~~~~dv~~~~~~~~~v~~------~~~~~DilI~~Aav~d~~ 281 (399)
T PRK05579 244 -------AGVKRIDVESAQEMLDAVLA------ALPQADIFIMAAAVADYR 281 (399)
T ss_pred -------CCcEEEccCCHHHHHHHHHH------hcCCCCEEEEcccccccc
Confidence 01335778888888776552 245678899999999984
No 17
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=98.30 E-value=4.8e-07 Score=86.31 Aligned_cols=37 Identities=30% Similarity=0.432 Sum_probs=34.1
Q ss_pred cceeeeecCCcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 4 NTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 4 ~~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
.+||||||+|||.+|.++|++|+++||.|++++++.+
T Consensus 14 D~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~ 50 (227)
T TIGR02114 14 DSVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA 50 (227)
T ss_pred CCceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh
Confidence 3899999999999999999999999999999987543
No 18
>COG0452 Dfp Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism]
Probab=97.90 E-value=9e-06 Score=83.60 Aligned_cols=36 Identities=31% Similarity=0.360 Sum_probs=34.0
Q ss_pred ceeeeecCCcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 5 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 5 ~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
+||||+|.|||+||.++|++++++|+.|+++++..+
T Consensus 199 pvr~itn~ssGk~g~alA~a~~~~GA~V~lv~g~~~ 234 (392)
T COG0452 199 PVRFISNRSSGKMGFALAAAAKRRGASVTLVSGPTS 234 (392)
T ss_pred cceeeeccccccccHHHHHHHHHcCCceEEecCCCc
Confidence 799999999999999999999999999999999544
No 19
>PRK07577 short chain dehydrogenase; Provisional
Probab=90.59 E-value=1.2 Score=41.17 Aligned_cols=26 Identities=12% Similarity=0.063 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|++|+++|+.|+.+.|+
T Consensus 11 ~s~~iG~~ia~~l~~~G~~v~~~~r~ 36 (234)
T PRK07577 11 ATKGIGLALSLRLANLGHQVIGIARS 36 (234)
T ss_pred CCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 57889999999999999999999875
No 20
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=90.55 E-value=0.95 Score=43.01 Aligned_cols=31 Identities=10% Similarity=0.207 Sum_probs=24.3
Q ss_pred eEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 154 RFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 154 RfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
-+|+- .+|-.|.++|++|+++|+.|+.+.+.
T Consensus 13 ~lItG-a~~~iG~~ia~~l~~~G~~vv~~~~~ 43 (265)
T PRK07097 13 ALITG-ASYGIGFAIAKAYAKAGATIVFNDIN 43 (265)
T ss_pred EEEeC-CCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 34444 34677999999999999999888664
No 21
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=90.42 E-value=0.76 Score=43.09 Aligned_cols=27 Identities=19% Similarity=0.224 Sum_probs=24.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
+|+-.|.++|+.|++.|+.|++.+++.
T Consensus 4 ~s~GiG~aia~~l~~~Ga~V~~~~~~~ 30 (241)
T PF13561_consen 4 SSSGIGRAIARALAEEGANVILTDRNE 30 (241)
T ss_dssp STSHHHHHHHHHHHHTTEEEEEEESSH
T ss_pred CCCChHHHHHHHHHHCCCEEEEEeCCh
Confidence 578899999999999999999999874
No 22
>PRK06179 short chain dehydrogenase; Provisional
Probab=89.93 E-value=1.2 Score=42.39 Aligned_cols=30 Identities=20% Similarity=0.332 Sum_probs=25.4
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+|+- .||..|.++|+.|+++|+.|+.+.++
T Consensus 8 lVtG-asg~iG~~~a~~l~~~g~~V~~~~r~ 37 (270)
T PRK06179 8 LVTG-ASSGIGRATAEKLARAGYRVFGTSRN 37 (270)
T ss_pred EEec-CCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4555 56788999999999999999988875
No 23
>PRK06182 short chain dehydrogenase; Validated
Probab=89.88 E-value=1.3 Score=42.25 Aligned_cols=29 Identities=21% Similarity=0.299 Sum_probs=24.6
Q ss_pred EecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 156 VDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 156 IdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
|+- ++|..|.++|++|+++|+.|+.+.|.
T Consensus 8 ItG-asggiG~~la~~l~~~G~~V~~~~r~ 36 (273)
T PRK06182 8 VTG-ASSGIGKATARRLAAQGYTVYGAARR 36 (273)
T ss_pred EEC-CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 444 56779999999999999999988875
No 24
>PRK05717 oxidoreductase; Validated
Probab=89.78 E-value=1.2 Score=41.88 Aligned_cols=26 Identities=15% Similarity=0.346 Sum_probs=22.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|+++|+.|+++.+.
T Consensus 18 ~sg~IG~~~a~~l~~~g~~v~~~~~~ 43 (255)
T PRK05717 18 AARGIGLGIAAWLIAEGWQVVLADLD 43 (255)
T ss_pred CcchHHHHHHHHHHHcCCEEEEEcCC
Confidence 36888999999999999999998654
No 25
>PRK06841 short chain dehydrogenase; Provisional
Probab=89.72 E-value=1.5 Score=41.19 Aligned_cols=27 Identities=22% Similarity=0.251 Sum_probs=23.9
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 159 FSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 159 fSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
=.+|..|.++|+.|+++|+.|+.+.|.
T Consensus 22 Gas~~IG~~la~~l~~~G~~Vi~~~r~ 48 (255)
T PRK06841 22 GGASGIGHAIAELFAAKGARVALLDRS 48 (255)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 356788999999999999999998875
No 26
>PRK07814 short chain dehydrogenase; Provisional
Probab=89.68 E-value=1.1 Score=42.51 Aligned_cols=26 Identities=31% Similarity=0.308 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|-.|.++|+.|+++|+.|+.+.|+
T Consensus 18 asggIG~~~a~~l~~~G~~Vi~~~r~ 43 (263)
T PRK07814 18 AGRGLGAAIALAFAEAGADVLIAART 43 (263)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57889999999999999999999875
No 27
>PRK06398 aldose dehydrogenase; Validated
Probab=89.67 E-value=1.3 Score=42.15 Aligned_cols=26 Identities=19% Similarity=0.188 Sum_probs=23.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|++.||.|+.+.++
T Consensus 14 as~gIG~~ia~~l~~~G~~Vi~~~r~ 39 (258)
T PRK06398 14 GSQGIGKAVVNRLKEEGSNVINFDIK 39 (258)
T ss_pred CCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 57889999999999999999988764
No 28
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=89.64 E-value=0.31 Score=48.45 Aligned_cols=78 Identities=26% Similarity=0.285 Sum_probs=53.7
Q ss_pred cccchHHHHHHHHHCCCeEEEEeecCCCCCccc-cCCCcccccccccCCCCCCceecCCCcccchHHHHHHHHhhhhcCc
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRNNSIRPYIR-HFSGATFLDCLQVSADNPDTISVKPEVVPKLRPILDRYARVKRDSL 92 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~~~~~pf~r-~~~~~~~ld~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~ 92 (400)
||.-|+.+|+-++++||.|.=|.|+.|.+-..| ||-.... .++.
T Consensus 11 TGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~-----------------------------------~~~~ 55 (345)
T COG1089 11 TGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPH-----------------------------------LNDP 55 (345)
T ss_pred cCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccc-----------------------------------cCCc
Confidence 688999999999999999999999977555444 4322111 1133
Q ss_pred eEEEeccCHHHHHHHHHHHHHHHhhccChHHHHHHHHHH
Q psy14323 93 LLSVEFTTLAEYLWLLRTVCESLQDEGNRVLLYLAAAVA 131 (400)
Q Consensus 93 Ll~i~f~Tv~eYl~~L~~i~~~l~~~~~~~~~~laaaVs 131 (400)
-+.+-+..+.|.-.+++.+.+. .+..+|..||-|
T Consensus 56 ~l~l~~gDLtD~~~l~r~l~~v-----~PdEIYNLaAQS 89 (345)
T COG1089 56 RLHLHYGDLTDSSNLLRILEEV-----QPDEIYNLAAQS 89 (345)
T ss_pred eeEEEeccccchHHHHHHHHhc-----Cchhheeccccc
Confidence 4777788888888888876432 345566555544
No 29
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=89.53 E-value=1.2 Score=41.71 Aligned_cols=27 Identities=19% Similarity=0.032 Sum_probs=23.8
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 159 FSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 159 fSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
=.||-.|.++|++|+++|+.|+.+.+.
T Consensus 14 Gasg~iG~~la~~l~~~G~~v~~~~r~ 40 (262)
T PRK13394 14 GAASGIGKEIALELARAGAAVAIADLN 40 (262)
T ss_pred CCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 356899999999999999999988775
No 30
>PRK06138 short chain dehydrogenase; Provisional
Probab=89.46 E-value=1.5 Score=40.90 Aligned_cols=26 Identities=15% Similarity=0.307 Sum_probs=23.6
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|+++|+.|+.+.|+
T Consensus 13 ~sg~iG~~la~~l~~~G~~v~~~~r~ 38 (252)
T PRK06138 13 AGSGIGRATAKLFAREGARVVVADRD 38 (252)
T ss_pred CCchHHHHHHHHHHHCCCeEEEecCC
Confidence 36889999999999999999999876
No 31
>PRK12937 short chain dehydrogenase; Provisional
Probab=89.20 E-value=1.5 Score=40.73 Aligned_cols=27 Identities=22% Similarity=0.369 Sum_probs=23.6
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.+|..|.++|+.|.++|+.|+++.++.
T Consensus 13 ~~~~iG~~la~~l~~~g~~v~~~~~~~ 39 (245)
T PRK12937 13 ASRGIGAAIARRLAADGFAVAVNYAGS 39 (245)
T ss_pred CCchHHHHHHHHHHHCCCEEEEecCCC
Confidence 368899999999999999999887653
No 32
>PRK12828 short chain dehydrogenase; Provisional
Probab=89.00 E-value=2.3 Score=39.08 Aligned_cols=27 Identities=15% Similarity=0.299 Sum_probs=24.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
++|..|.++|+.|+++|+.|+.+.|..
T Consensus 15 atg~iG~~la~~l~~~G~~v~~~~r~~ 41 (239)
T PRK12828 15 GFGGLGRATAAWLAARGARVALIGRGA 41 (239)
T ss_pred CCCcHhHHHHHHHHHCCCeEEEEeCCh
Confidence 568899999999999999999999853
No 33
>KOG1502|consensus
Probab=88.86 E-value=1.4 Score=44.45 Aligned_cols=27 Identities=22% Similarity=0.291 Sum_probs=24.4
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.||-.|++|++.+|.+||.|.=.-|..
T Consensus 14 AsGfIgswivk~LL~rGY~V~gtVR~~ 40 (327)
T KOG1502|consen 14 ASGFIGSWIVKLLLSRGYTVRGTVRDP 40 (327)
T ss_pred CchHHHHHHHHHHHhCCCEEEEEEcCc
Confidence 589999999999999999999888764
No 34
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=88.76 E-value=1.1 Score=43.90 Aligned_cols=26 Identities=27% Similarity=0.468 Sum_probs=22.5
Q ss_pred CCChhHHHHHHHHHHCC--CEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQG--YAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G--~~Vifl~~~ 185 (400)
.||..|..+++.++++| ++|..+.+.
T Consensus 5 gsGflG~~iv~~Ll~~g~~~~Vr~~d~~ 32 (280)
T PF01073_consen 5 GSGFLGSHIVRQLLERGYIYEVRVLDRS 32 (280)
T ss_pred CCcHHHHHHHHHHHHCCCceEEEEcccc
Confidence 48999999999999999 788877654
No 35
>PRK07063 short chain dehydrogenase; Provisional
Probab=88.63 E-value=1.6 Score=41.12 Aligned_cols=30 Identities=27% Similarity=0.299 Sum_probs=25.0
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+- .+|..|.++|+.|+++|+.|+++.+.
T Consensus 11 lVtG-as~gIG~~~a~~l~~~G~~vv~~~r~ 40 (260)
T PRK07063 11 LVTG-AAQGIGAAIARAFAREGAAVALADLD 40 (260)
T ss_pred EEEC-CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3443 46788999999999999999998875
No 36
>PRK07774 short chain dehydrogenase; Provisional
Probab=88.62 E-value=1.4 Score=41.03 Aligned_cols=30 Identities=23% Similarity=0.329 Sum_probs=25.5
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+|+- .||-.|.++|+.|+++|+.|+.+.|.
T Consensus 10 lItG-asg~iG~~la~~l~~~g~~vi~~~r~ 39 (250)
T PRK07774 10 IVTG-AAGGIGQAYAEALAREGASVVVADIN 39 (250)
T ss_pred EEEC-CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3444 56789999999999999999999875
No 37
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=88.59 E-value=1.9 Score=40.33 Aligned_cols=30 Identities=10% Similarity=0.149 Sum_probs=25.3
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+|+- .+|..|.++|+.|.++|++|+.+.+.
T Consensus 6 lItG-~sg~iG~~la~~L~~~g~~vi~~~r~ 35 (256)
T PRK12745 6 LVTG-GRRGIGLGIARALAAAGFDLAINDRP 35 (256)
T ss_pred EEeC-CCchHHHHHHHHHHHCCCEEEEEecC
Confidence 3444 57899999999999999999998865
No 38
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=88.56 E-value=1.8 Score=40.35 Aligned_cols=26 Identities=19% Similarity=0.300 Sum_probs=22.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|+.|+++|+.|+.+++.
T Consensus 11 ~s~giG~~~a~~l~~~G~~vv~~~~~ 36 (246)
T PRK12938 11 GMGGIGTSICQRLHKDGFKVVAGCGP 36 (246)
T ss_pred CCChHHHHHHHHHHHcCCEEEEEcCC
Confidence 47889999999999999999887654
No 39
>PRK06194 hypothetical protein; Provisional
Probab=88.54 E-value=1.6 Score=41.77 Aligned_cols=26 Identities=12% Similarity=0.057 Sum_probs=23.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|-.|.++|+.++++|+.|+++.+.
T Consensus 14 asggIG~~la~~l~~~G~~V~~~~r~ 39 (287)
T PRK06194 14 AASGFGLAFARIGAALGMKLVLADVQ 39 (287)
T ss_pred CccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45788999999999999999998774
No 40
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=88.48 E-value=2.2 Score=40.38 Aligned_cols=30 Identities=20% Similarity=0.340 Sum_probs=24.6
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+- .+|-.|.++|+.|+++|+.|+.+.++
T Consensus 10 lVtG-as~gIG~~ia~~l~~~G~~V~~~~r~ 39 (263)
T PRK06200 10 LITG-GGSGIGRALVERFLAEGARVAVLERS 39 (263)
T ss_pred EEeC-CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3444 45677999999999999999988775
No 41
>PRK12743 oxidoreductase; Provisional
Probab=88.48 E-value=1.9 Score=40.66 Aligned_cols=30 Identities=17% Similarity=0.341 Sum_probs=24.3
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+- .||-.|.++|+.|+++|+.|+++.+.
T Consensus 6 lItG-as~giG~~~a~~l~~~G~~V~~~~~~ 35 (256)
T PRK12743 6 IVTA-SDSGIGKACALLLAQQGFDIGITWHS 35 (256)
T ss_pred EEEC-CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3444 45669999999999999999888764
No 42
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=88.40 E-value=1.6 Score=40.44 Aligned_cols=26 Identities=19% Similarity=0.165 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|++|+++||.|+.+.|+
T Consensus 14 asg~iG~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 14 AARGIGRAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred CCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 57889999999999999999999876
No 43
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=88.31 E-value=2.6 Score=39.96 Aligned_cols=34 Identities=15% Similarity=0.221 Sum_probs=28.3
Q ss_pred ceeEEecCCC-ChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 152 TVRFVDNFSA-GTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 152 ~VRfIdNfSS-G~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+=.||=-|+ +-.|.++|+.|+++|+.|++.+|.
T Consensus 8 k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~ 42 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN 42 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc
Confidence 4456777775 789999999999999999988765
No 44
>PRK06114 short chain dehydrogenase; Provisional
Probab=88.26 E-value=2.1 Score=40.38 Aligned_cols=34 Identities=18% Similarity=0.162 Sum_probs=27.2
Q ss_pred ceeEEecCCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 152 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 152 ~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.+-.|+- .+|-.|.++|+.|.+.||.|+++.++.
T Consensus 9 k~~lVtG-~s~gIG~~ia~~l~~~G~~v~~~~r~~ 42 (254)
T PRK06114 9 QVAFVTG-AGSGIGQRIAIGLAQAGADVALFDLRT 42 (254)
T ss_pred CEEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4455665 455699999999999999999998753
No 45
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=88.23 E-value=1.8 Score=40.82 Aligned_cols=30 Identities=17% Similarity=0.306 Sum_probs=25.3
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+|+- ++|-.|.++|+.|+++|+.|+.+.+.
T Consensus 10 lItG-as~~iG~~ia~~l~~~G~~v~~~~r~ 39 (257)
T PRK07067 10 LLTG-AASGIGEAVAERYLAEGARVVIADIK 39 (257)
T ss_pred EEeC-CCchHHHHHHHHHHHcCCEEEEEcCC
Confidence 4555 56788999999999999999998875
No 46
>PRK08643 acetoin reductase; Validated
Probab=88.10 E-value=1.8 Score=40.67 Aligned_cols=30 Identities=23% Similarity=0.330 Sum_probs=24.8
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+- .+|..|.++|++|+++|+.|+.+.++
T Consensus 6 lItG-as~giG~~la~~l~~~G~~v~~~~r~ 35 (256)
T PRK08643 6 LVTG-AGQGIGFAIAKRLVEDGFKVAIVDYN 35 (256)
T ss_pred EEEC-CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4444 45669999999999999999998875
No 47
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=87.95 E-value=1.7 Score=40.38 Aligned_cols=31 Identities=13% Similarity=0.153 Sum_probs=26.2
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.|+- .+|..|.++|++|+.+|+.|+++.|+.
T Consensus 11 lVtG-~sg~iG~~l~~~L~~~G~~Vi~~~r~~ 41 (239)
T PRK07666 11 LITG-AGRGIGRAVAIALAKEGVNVGLLARTE 41 (239)
T ss_pred EEEc-CCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3444 578999999999999999999999863
No 48
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=87.82 E-value=2.4 Score=39.09 Aligned_cols=31 Identities=23% Similarity=0.368 Sum_probs=25.6
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.|+. .||..|.++++.|+++||.|+.+.+..
T Consensus 9 lItG-~sg~iG~~l~~~l~~~G~~v~~~~~~~ 39 (248)
T PRK05557 9 LVTG-ASRGIGRAIAERLAAQGANVVINYASS 39 (248)
T ss_pred EEEC-CCchHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4555 467899999999999999998887753
No 49
>PRK12746 short chain dehydrogenase; Provisional
Probab=87.78 E-value=2.9 Score=39.17 Aligned_cols=29 Identities=17% Similarity=0.250 Sum_probs=23.7
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEec
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYS 184 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~ 184 (400)
+|+- .||..|.++|++|+++|+.|+.+.+
T Consensus 10 lItG-asg~iG~~la~~l~~~G~~v~i~~~ 38 (254)
T PRK12746 10 LVTG-ASRGIGRAIAMRLANDGALVAIHYG 38 (254)
T ss_pred EEeC-CCchHHHHHHHHHHHCCCEEEEEcC
Confidence 3444 5799999999999999999987643
No 50
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=87.75 E-value=2.3 Score=40.30 Aligned_cols=32 Identities=28% Similarity=0.313 Sum_probs=25.5
Q ss_pred eeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 153 VRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 153 VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+=+|+-- ||-.|.++|+.|++.|+.|+.+.+.
T Consensus 7 ~vlItGa-s~gIG~~ia~~l~~~G~~V~~~~r~ 38 (262)
T TIGR03325 7 VVLVTGG-ASGLGRAIVDRFVAEGARVAVLDKS 38 (262)
T ss_pred EEEEECC-CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3345443 5669999999999999999998765
No 51
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=87.66 E-value=1.9 Score=40.19 Aligned_cols=31 Identities=16% Similarity=0.103 Sum_probs=25.5
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.|+.- ||..|.++|++|+++||.|+.+.|..
T Consensus 8 lItG~-sg~iG~~la~~l~~~g~~v~~~~r~~ 38 (258)
T PRK12429 8 LVTGA-ASGIGLEIALALAKEGAKVVIADLND 38 (258)
T ss_pred EEECC-CchHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34444 57889999999999999999998753
No 52
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=87.59 E-value=2 Score=40.41 Aligned_cols=26 Identities=19% Similarity=0.152 Sum_probs=23.5
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|++.||.|+.+.|.
T Consensus 18 a~g~iG~~ia~~l~~~G~~V~~~~r~ 43 (255)
T PRK07523 18 SSQGIGYALAEGLAQAGAEVILNGRD 43 (255)
T ss_pred CcchHHHHHHHHHHHcCCEEEEEeCC
Confidence 57889999999999999999988775
No 53
>PRK05867 short chain dehydrogenase; Provisional
Probab=87.50 E-value=1.9 Score=40.61 Aligned_cols=32 Identities=16% Similarity=0.182 Sum_probs=25.7
Q ss_pred eeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 153 VRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 153 VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+=.|+- .+|-.|.++|+.|+++|+.|+++.++
T Consensus 11 ~vlVtG-as~gIG~~ia~~l~~~G~~V~~~~r~ 42 (253)
T PRK05867 11 RALITG-ASTGIGKRVALAYVEAGAQVAIAARH 42 (253)
T ss_pred EEEEEC-CCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 334555 45678999999999999999998875
No 54
>PRK12939 short chain dehydrogenase; Provisional
Probab=87.46 E-value=2.3 Score=39.52 Aligned_cols=31 Identities=29% Similarity=0.292 Sum_probs=25.4
Q ss_pred eEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 154 RFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 154 RfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
-.|+. .+|..|.++|+.|+++|+.|+.+.++
T Consensus 10 vlItG-a~g~iG~~la~~l~~~G~~v~~~~r~ 40 (250)
T PRK12939 10 ALVTG-AARGLGAAFAEALAEAGATVAFNDGL 40 (250)
T ss_pred EEEeC-CCChHHHHHHHHHHHcCCEEEEEeCC
Confidence 34554 46899999999999999999988664
No 55
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=87.34 E-value=2.4 Score=39.79 Aligned_cols=26 Identities=19% Similarity=0.250 Sum_probs=23.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|++|++.|+.|+.+.|.
T Consensus 8 asg~iG~~la~~l~~~G~~V~~~~r~ 33 (248)
T PRK10538 8 ATAGFGECITRRFIQQGHKVIATGRR 33 (248)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEECC
Confidence 56788999999999999999988775
No 56
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=87.29 E-value=2.9 Score=39.58 Aligned_cols=27 Identities=22% Similarity=0.390 Sum_probs=23.5
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.||-.|.++|+.|+++|+.|++++++.
T Consensus 16 as~gIG~~ia~~l~~~G~~v~~~~~~~ 42 (260)
T PRK08416 16 GTRGIGKAIVYEFAQSGVNIAFTYNSN 42 (260)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 567889999999999999999987643
No 57
>PRK08251 short chain dehydrogenase; Provisional
Probab=87.14 E-value=3.1 Score=38.78 Aligned_cols=26 Identities=15% Similarity=0.235 Sum_probs=23.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|+++|+.|+++.|.
T Consensus 10 as~giG~~la~~l~~~g~~v~~~~r~ 35 (248)
T PRK08251 10 ASSGLGAGMAREFAAKGRDLALCARR 35 (248)
T ss_pred CCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 57899999999999999999998775
No 58
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=87.05 E-value=2.4 Score=39.54 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=26.7
Q ss_pred ceeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 152 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 152 ~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+-+|+- .+|..|.++|+.|+++|+.|+.+.+.
T Consensus 7 ~~~lItG-~s~~iG~~la~~l~~~g~~v~~~~~~ 39 (247)
T PRK12935 7 KVAIVTG-GAKGIGKAITVALAQEGAKVVINYNS 39 (247)
T ss_pred CEEEEEC-CCCHHHHHHHHHHHHcCCEEEEEcCC
Confidence 4455666 46889999999999999999977654
No 59
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=86.93 E-value=3.6 Score=37.81 Aligned_cols=27 Identities=19% Similarity=0.194 Sum_probs=23.4
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.||..|.++|++|+++|+.|+.+.+..
T Consensus 14 asg~iG~~l~~~l~~~g~~v~~~~~~~ 40 (249)
T PRK12825 14 AARGLGRAIALRLARAGADVVVHYRSD 40 (249)
T ss_pred CCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence 478899999999999999998877653
No 60
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=86.89 E-value=2.7 Score=39.56 Aligned_cols=26 Identities=19% Similarity=0.160 Sum_probs=23.4
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|+++|+.|+.+.+.
T Consensus 16 as~gIG~~la~~l~~~G~~v~~~~r~ 41 (260)
T PRK12823 16 AAQGIGRGVALRAAAEGARVVLVDRS 41 (260)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 57889999999999999999988775
No 61
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=86.85 E-value=2.5 Score=38.84 Aligned_cols=31 Identities=16% Similarity=0.145 Sum_probs=26.1
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.|+- .||..|..+|++|+++||.|+.+.|+.
T Consensus 9 lItG-asg~iG~~l~~~l~~~g~~v~~~~r~~ 39 (246)
T PRK05653 9 LVTG-ASRGIGRAIALRLAADGAKVVIYDSNE 39 (246)
T ss_pred EEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3444 379999999999999999999998863
No 62
>PRK08263 short chain dehydrogenase; Provisional
Probab=86.85 E-value=2.8 Score=40.11 Aligned_cols=30 Identities=20% Similarity=0.234 Sum_probs=25.6
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+|+- .+|..|.++|++|+++|+.|+.+.++
T Consensus 7 lItG-asg~iG~~~a~~l~~~g~~V~~~~r~ 36 (275)
T PRK08263 7 FITG-ASRGFGRAWTEAALERGDRVVATARD 36 (275)
T ss_pred EEeC-CCChHHHHHHHHHHHCCCEEEEEECC
Confidence 3443 57899999999999999999998875
No 63
>PRK12829 short chain dehydrogenase; Provisional
Probab=86.84 E-value=2.8 Score=39.36 Aligned_cols=30 Identities=27% Similarity=0.227 Sum_probs=24.8
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+-- +|..|.++|+.++++|+.|+.+.|+
T Consensus 15 lItGa-~g~iG~~~a~~L~~~g~~V~~~~r~ 44 (264)
T PRK12829 15 LVTGG-ASGIGRAIAEAFAEAGARVHVCDVS 44 (264)
T ss_pred EEeCC-CCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 34444 5888999999999999999888875
No 64
>PRK07478 short chain dehydrogenase; Provisional
Probab=86.79 E-value=2.8 Score=39.42 Aligned_cols=26 Identities=15% Similarity=0.273 Sum_probs=23.2
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||-.|.++|+.|.++|+.|+++.++
T Consensus 14 as~giG~~ia~~l~~~G~~v~~~~r~ 39 (254)
T PRK07478 14 ASSGIGRAAAKLFAREGAKVVVGARR 39 (254)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999999999999999875
No 65
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=86.77 E-value=4.2 Score=37.97 Aligned_cols=35 Identities=14% Similarity=0.254 Sum_probs=28.1
Q ss_pred CceeEEecCCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 151 NTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 151 d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
+.+-+|+- .+|..|.++|++|+++|+.|+.+.|..
T Consensus 12 ~k~vlItG-~~g~iG~~la~~l~~~G~~Vi~~~r~~ 46 (247)
T PRK08945 12 DRIILVTG-AGDGIGREAALTYARHGATVILLGRTE 46 (247)
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCcEEEEeCCH
Confidence 34445555 578999999999999999999988753
No 66
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=86.69 E-value=4.2 Score=39.51 Aligned_cols=35 Identities=20% Similarity=0.313 Sum_probs=31.0
Q ss_pred CceeEEecCCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 151 NTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 151 d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
+.|=+||--||| .|.++|+.|.+.||.|++..|..
T Consensus 6 ~kv~lITGASSG-iG~A~A~~l~~~G~~vvl~aRR~ 40 (246)
T COG4221 6 GKVALITGASSG-IGEATARALAEAGAKVVLAARRE 40 (246)
T ss_pred CcEEEEecCcch-HHHHHHHHHHHCCCeEEEEeccH
Confidence 467789999998 69999999999999999999863
No 67
>PRK09135 pteridine reductase; Provisional
Probab=86.66 E-value=3.7 Score=37.98 Aligned_cols=30 Identities=23% Similarity=0.377 Sum_probs=25.5
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+|+- .+|..|..+++.|+++|+.|+.+.+.
T Consensus 10 lItG-a~g~iG~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 10 LITG-GARRIGAAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred EEeC-CCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 3444 57899999999999999999998875
No 68
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=86.60 E-value=3.8 Score=38.70 Aligned_cols=27 Identities=15% Similarity=0.150 Sum_probs=23.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.+|..|.++|+.|+++|+.|++..+..
T Consensus 15 a~~gIG~~ia~~l~~~G~~vvi~~~~~ 41 (261)
T PRK08936 15 GSTGLGRAMAVRFGKEKAKVVINYRSD 41 (261)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCCC
Confidence 456789999999999999999887753
No 69
>PRK06180 short chain dehydrogenase; Provisional
Probab=86.56 E-value=3 Score=39.97 Aligned_cols=26 Identities=12% Similarity=0.055 Sum_probs=23.2
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|+++|+.|+.+.|+
T Consensus 12 asggiG~~la~~l~~~G~~V~~~~r~ 37 (277)
T PRK06180 12 VSSGFGRALAQAALAAGHRVVGTVRS 37 (277)
T ss_pred CCChHHHHHHHHHHhCcCEEEEEeCC
Confidence 35688999999999999999999875
No 70
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=86.53 E-value=2.8 Score=39.63 Aligned_cols=26 Identities=15% Similarity=0.190 Sum_probs=23.4
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
++|..|.++|+.|+++||.|+++.|.
T Consensus 8 as~gIG~aia~~l~~~G~~V~~~~r~ 33 (259)
T PRK08340 8 SSRGIGFNVARELLKKGARVVISSRN 33 (259)
T ss_pred CCcHHHHHHHHHHHHcCCEEEEEeCC
Confidence 56789999999999999999998875
No 71
>PRK08589 short chain dehydrogenase; Validated
Probab=86.49 E-value=2.9 Score=40.05 Aligned_cols=30 Identities=20% Similarity=0.168 Sum_probs=24.5
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+-- +|-.|.++|+.|+++|+.|+.+.++
T Consensus 10 lItGa-s~gIG~aia~~l~~~G~~vi~~~r~ 39 (272)
T PRK08589 10 VITGA-STGIGQASAIALAQEGAYVLAVDIA 39 (272)
T ss_pred EEECC-CchHHHHHHHHHHHCCCEEEEEeCc
Confidence 44444 4567999999999999999999876
No 72
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=86.43 E-value=3.3 Score=38.59 Aligned_cols=26 Identities=15% Similarity=0.285 Sum_probs=23.0
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|-.|..+|+.|+++|+.|++++++
T Consensus 10 as~giG~~la~~l~~~g~~v~~~~~~ 35 (248)
T PRK06947 10 ASRGIGRATAVLAAARGWSVGINYAR 35 (248)
T ss_pred CCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 56889999999999999999887764
No 73
>PRK06482 short chain dehydrogenase; Provisional
Probab=86.37 E-value=2.9 Score=39.85 Aligned_cols=26 Identities=15% Similarity=0.156 Sum_probs=23.6
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|++++++|+.|+.+.|+
T Consensus 10 asg~IG~~la~~L~~~g~~v~~~~r~ 35 (276)
T PRK06482 10 ASSGFGRGMTERLLARGDRVAATVRR 35 (276)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 37899999999999999999998875
No 74
>PRK07035 short chain dehydrogenase; Provisional
Probab=86.35 E-value=2.8 Score=39.28 Aligned_cols=26 Identities=15% Similarity=0.236 Sum_probs=23.4
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|+++|+.|+.+.+.
T Consensus 16 as~gIG~~l~~~l~~~G~~Vi~~~r~ 41 (252)
T PRK07035 16 ASRGIGEAIAKLLAQQGAHVIVSSRK 41 (252)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46889999999999999999999875
No 75
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=86.35 E-value=2.5 Score=39.38 Aligned_cols=26 Identities=15% Similarity=0.045 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|-.|.++|+.|+++|+.|+.+.|.
T Consensus 9 a~g~lG~~l~~~l~~~g~~v~~~~r~ 34 (255)
T TIGR01963 9 AASGIGLAIALALAAAGANVVVNDLG 34 (255)
T ss_pred CcchHHHHHHHHHHHCCCEEEEEeCC
Confidence 56888999999999999999999886
No 76
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=86.31 E-value=2.5 Score=39.66 Aligned_cols=26 Identities=23% Similarity=0.094 Sum_probs=23.5
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|+.|++.|+.|+++.++
T Consensus 17 as~giG~~ia~~L~~~G~~vvl~~r~ 42 (254)
T PRK08085 17 SAQGIGFLLATGLAEYGAEIIINDIT 42 (254)
T ss_pred CCChHHHHHHHHHHHcCCEEEEEcCC
Confidence 56889999999999999999998875
No 77
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=86.25 E-value=5.1 Score=36.93 Aligned_cols=25 Identities=20% Similarity=0.328 Sum_probs=22.7
Q ss_pred CChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 161 AGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 161 SG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+|-.|.++|+.|+++|+.|+.+.++
T Consensus 9 sg~iG~~la~~l~~~G~~v~~~~r~ 33 (242)
T TIGR01829 9 MGGIGTAICQRLAKDGYRVAANCGP 33 (242)
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 6778999999999999999998874
No 78
>PRK08226 short chain dehydrogenase; Provisional
Probab=86.11 E-value=2.4 Score=40.01 Aligned_cols=26 Identities=12% Similarity=0.234 Sum_probs=23.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|+.|+++|+.|+.+.|+
T Consensus 14 ~s~giG~~la~~l~~~G~~Vv~~~r~ 39 (263)
T PRK08226 14 ALQGIGEGIARVFARHGANLILLDIS 39 (263)
T ss_pred CCChHHHHHHHHHHHCCCEEEEecCC
Confidence 46889999999999999999998875
No 79
>PRK08265 short chain dehydrogenase; Provisional
Probab=86.09 E-value=3.2 Score=39.45 Aligned_cols=33 Identities=27% Similarity=0.245 Sum_probs=26.8
Q ss_pred ceeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 152 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 152 ~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+-+|+- .||..|.++|+.|+++|+.|+++.|.
T Consensus 7 k~vlItG-as~gIG~~ia~~l~~~G~~V~~~~r~ 39 (261)
T PRK08265 7 KVAIVTG-GATLIGAAVARALVAAGARVAIVDID 39 (261)
T ss_pred CEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3445555 45679999999999999999999875
No 80
>PRK08267 short chain dehydrogenase; Provisional
Probab=86.03 E-value=4.2 Score=38.27 Aligned_cols=26 Identities=19% Similarity=0.216 Sum_probs=23.4
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|++++++|+.|+.+.++
T Consensus 9 asg~iG~~la~~l~~~G~~V~~~~r~ 34 (260)
T PRK08267 9 AASGIGRATALLFAAEGWRVGAYDIN 34 (260)
T ss_pred CCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 46889999999999999999998775
No 81
>PRK07062 short chain dehydrogenase; Provisional
Probab=86.01 E-value=4.3 Score=38.37 Aligned_cols=26 Identities=23% Similarity=0.323 Sum_probs=23.5
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|+.|+++|+.|+.+.|.
T Consensus 16 as~giG~~ia~~l~~~G~~V~~~~r~ 41 (265)
T PRK07062 16 GSSGIGLATVELLLEAGASVAICGRD 41 (265)
T ss_pred CCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 56789999999999999999998875
No 82
>PRK07024 short chain dehydrogenase; Provisional
Probab=85.92 E-value=3.2 Score=39.18 Aligned_cols=26 Identities=15% Similarity=0.204 Sum_probs=23.5
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+||-.|.++|+.|+++|+.|+++.+.
T Consensus 10 as~gIG~~la~~l~~~G~~v~~~~r~ 35 (257)
T PRK07024 10 ASSGIGQALAREYARQGATLGLVARR 35 (257)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47889999999999999999998875
No 83
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=85.72 E-value=2.4 Score=39.49 Aligned_cols=29 Identities=14% Similarity=0.033 Sum_probs=23.7
Q ss_pred EecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 156 VDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 156 IdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
|+-- +|..|.++|++|+++||.|+.+.++
T Consensus 10 ItGa-s~gIG~~ia~~l~~~G~~vi~~~r~ 38 (248)
T TIGR01832 10 VTGA-NTGLGQGIAVGLAEAGADIVGAGRS 38 (248)
T ss_pred EECC-CchHHHHHHHHHHHCCCEEEEEcCc
Confidence 3433 5668999999999999999988764
No 84
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=85.67 E-value=2.7 Score=39.59 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=27.0
Q ss_pred ceeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 152 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 152 ~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
..-.|+- .+|-.|.++|+.|+++|+.|+.+.+.
T Consensus 13 k~ilItG-a~g~IG~~la~~l~~~G~~V~~~~r~ 45 (259)
T PRK08213 13 KTALVTG-GSRGLGLQIAEALGEAGARVVLSARK 45 (259)
T ss_pred CEEEEEC-CCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 3344554 57889999999999999999998875
No 85
>PRK12827 short chain dehydrogenase; Provisional
Probab=85.56 E-value=4.8 Score=37.18 Aligned_cols=26 Identities=15% Similarity=0.217 Sum_probs=22.9
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|-.|.++|++|+++||+|+.+.+.
T Consensus 14 asg~iG~~la~~l~~~g~~v~~~~~~ 39 (249)
T PRK12827 14 GSGGLGRAIAVRLAADGADVIVLDIH 39 (249)
T ss_pred CCChHHHHHHHHHHHCCCeEEEEcCc
Confidence 56788999999999999999998764
No 86
>PRK05876 short chain dehydrogenase; Provisional
Probab=85.55 E-value=2.7 Score=40.53 Aligned_cols=30 Identities=17% Similarity=0.141 Sum_probs=24.6
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||-- +|-.|.++|+.|+++|+.|++..++
T Consensus 10 lVTGa-s~gIG~ala~~La~~G~~Vv~~~r~ 39 (275)
T PRK05876 10 VITGG-ASGIGLATGTEFARRGARVVLGDVD 39 (275)
T ss_pred EEeCC-CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 45555 4667999999999999999988765
No 87
>PRK07890 short chain dehydrogenase; Provisional
Probab=85.54 E-value=2.6 Score=39.45 Aligned_cols=26 Identities=15% Similarity=0.078 Sum_probs=23.2
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|-.|.++|++|+++|+.|+.+.|.
T Consensus 13 a~~~IG~~la~~l~~~G~~V~~~~r~ 38 (258)
T PRK07890 13 VGPGLGRTLAVRAARAGADVVLAART 38 (258)
T ss_pred CCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 47789999999999999999988774
No 88
>PRK05854 short chain dehydrogenase; Provisional
Probab=85.50 E-value=4.6 Score=39.83 Aligned_cols=32 Identities=13% Similarity=0.119 Sum_probs=25.7
Q ss_pred eeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 153 VRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 153 VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+=.||-- +|-.|.++|+.|+++|+.|+++.|+
T Consensus 16 ~~lITGa-s~GIG~~~a~~La~~G~~Vil~~R~ 47 (313)
T PRK05854 16 RAVVTGA-SDGLGLGLARRLAAAGAEVILPVRN 47 (313)
T ss_pred EEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3345554 4678999999999999999998875
No 89
>PRK07856 short chain dehydrogenase; Provisional
Probab=85.50 E-value=3 Score=39.13 Aligned_cols=26 Identities=19% Similarity=0.218 Sum_probs=23.2
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|+++|+.|+++.+.
T Consensus 14 as~gIG~~la~~l~~~g~~v~~~~r~ 39 (252)
T PRK07856 14 GTRGIGAGIARAFLAAGATVVVCGRR 39 (252)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 46778999999999999999998875
No 90
>PRK07109 short chain dehydrogenase; Provisional
Probab=85.47 E-value=2.8 Score=41.87 Aligned_cols=30 Identities=13% Similarity=0.319 Sum_probs=25.0
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+- .||-.|.++|+.|+++|+.|+++.|+
T Consensus 12 lITG-as~gIG~~la~~la~~G~~Vvl~~R~ 41 (334)
T PRK07109 12 VITG-ASAGVGRATARAFARRGAKVVLLARG 41 (334)
T ss_pred EEEC-CCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 3443 46789999999999999999998875
No 91
>PRK12744 short chain dehydrogenase; Provisional
Probab=85.45 E-value=4.5 Score=38.12 Aligned_cols=31 Identities=13% Similarity=0.131 Sum_probs=24.8
Q ss_pred eEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 154 RFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 154 RfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
=+|+- .+|..|.++|+.|++.|+.|+.+.+.
T Consensus 11 vlItG-a~~gIG~~~a~~l~~~G~~vv~i~~~ 41 (257)
T PRK12744 11 VLIAG-GAKNLGGLIARDLAAQGAKAVAIHYN 41 (257)
T ss_pred EEEEC-CCchHHHHHHHHHHHCCCcEEEEecC
Confidence 34444 56779999999999999998888764
No 92
>PRK08339 short chain dehydrogenase; Provisional
Probab=85.44 E-value=3.6 Score=39.28 Aligned_cols=30 Identities=17% Similarity=0.261 Sum_probs=24.3
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||- ++|-.|.++|+.|+++||.|+++.|+
T Consensus 12 lItG-as~gIG~aia~~l~~~G~~V~~~~r~ 41 (263)
T PRK08339 12 FTTA-SSKGIGFGVARVLARAGADVILLSRN 41 (263)
T ss_pred EEeC-CCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 4444 45677999999999999999988775
No 93
>PRK07069 short chain dehydrogenase; Validated
Probab=85.34 E-value=5.5 Score=37.02 Aligned_cols=25 Identities=28% Similarity=0.335 Sum_probs=22.6
Q ss_pred CChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 161 AGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 161 SG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+|-.|.++|+.|+++||.|+.+.++
T Consensus 8 ~~~iG~~~a~~l~~~G~~v~~~~r~ 32 (251)
T PRK07069 8 AGGLGRAIARRMAEQGAKVFLTDIN 32 (251)
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5669999999999999999998875
No 94
>PLN02253 xanthoxin dehydrogenase
Probab=85.22 E-value=4.2 Score=38.84 Aligned_cols=30 Identities=30% Similarity=0.308 Sum_probs=24.9
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+- .+|..|.++|++|+++|+.|+++.+.
T Consensus 22 lItG-as~gIG~~la~~l~~~G~~v~~~~~~ 51 (280)
T PLN02253 22 LVTG-GATGIGESIVRLFHKHGAKVCIVDLQ 51 (280)
T ss_pred EEEC-CCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 4444 56788999999999999999998764
No 95
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=85.14 E-value=3 Score=39.43 Aligned_cols=32 Identities=16% Similarity=0.173 Sum_probs=25.8
Q ss_pred eeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 153 VRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 153 VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+-.|+- .+|-.|.++|+.|+++|+.|+.+.+.
T Consensus 11 ~vlItG-~s~gIG~~la~~l~~~G~~v~~~~~~ 42 (266)
T PRK06171 11 IIIVTG-GSSGIGLAIVKELLANGANVVNADIH 42 (266)
T ss_pred EEEEeC-CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 334554 46789999999999999999998764
No 96
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=85.11 E-value=2.8 Score=39.57 Aligned_cols=25 Identities=12% Similarity=0.069 Sum_probs=22.0
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEec
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYS 184 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~ 184 (400)
.+|-.|.++|+.|.+.|+.|+.+.+
T Consensus 18 ~~~gIG~a~a~~l~~~G~~vv~~~~ 42 (253)
T PRK08993 18 CDTGLGQGMALGLAEAGCDIVGINI 42 (253)
T ss_pred CCchHHHHHHHHHHHCCCEEEEecC
Confidence 5678999999999999999987754
No 97
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=85.09 E-value=3.8 Score=38.14 Aligned_cols=24 Identities=25% Similarity=0.403 Sum_probs=20.9
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEe
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVY 183 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~ 183 (400)
.+|..|.++|++|+++|+.|+.+.
T Consensus 12 a~g~iG~~~a~~l~~~g~~v~~~~ 35 (250)
T PRK08063 12 SSRGIGKAIALRLAEEGYDIAVNY 35 (250)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEc
Confidence 468889999999999999988753
No 98
>PRK06196 oxidoreductase; Provisional
Probab=85.08 E-value=3.6 Score=40.38 Aligned_cols=30 Identities=13% Similarity=0.163 Sum_probs=25.3
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+= .||..|.++|+.|+++|+.|+++.|+
T Consensus 30 lITG-asggIG~~~a~~L~~~G~~Vv~~~R~ 59 (315)
T PRK06196 30 IVTG-GYSGLGLETTRALAQAGAHVIVPARR 59 (315)
T ss_pred EEeC-CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4444 56779999999999999999998875
No 99
>PRK06197 short chain dehydrogenase; Provisional
Probab=85.07 E-value=3.9 Score=39.87 Aligned_cols=26 Identities=12% Similarity=0.183 Sum_probs=23.4
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|-.|.++|+.|+++|+.|+++.|.
T Consensus 24 as~gIG~~~a~~l~~~G~~vi~~~r~ 49 (306)
T PRK06197 24 ANTGLGYETAAALAAKGAHVVLAVRN 49 (306)
T ss_pred CCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 56788999999999999999988875
No 100
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=84.95 E-value=3.2 Score=38.54 Aligned_cols=28 Identities=14% Similarity=0.124 Sum_probs=24.8
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 159 FSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 159 fSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
=.+|..|.++|+.|+++|++|+.+.|+.
T Consensus 12 Gasg~iG~~l~~~l~~~G~~V~~~~r~~ 39 (251)
T PRK07231 12 GASSGIGEGIARRFAAEGARVVVTDRNE 39 (251)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3578999999999999999999998863
No 101
>PRK05693 short chain dehydrogenase; Provisional
Probab=84.92 E-value=3.6 Score=39.19 Aligned_cols=26 Identities=19% Similarity=0.275 Sum_probs=23.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|+.|+++|+.|+.+.|.
T Consensus 9 asggiG~~la~~l~~~G~~V~~~~r~ 34 (274)
T PRK05693 9 CSSGIGRALADAFKAAGYEVWATARK 34 (274)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 46889999999999999999988775
No 102
>PRK07326 short chain dehydrogenase; Provisional
Probab=84.92 E-value=3.4 Score=38.14 Aligned_cols=26 Identities=19% Similarity=0.287 Sum_probs=24.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|++|+++|+.|+.+.|.
T Consensus 14 atg~iG~~la~~l~~~g~~V~~~~r~ 39 (237)
T PRK07326 14 GSKGIGFAIAEALLAEGYKVAITARD 39 (237)
T ss_pred CCCcHHHHHHHHHHHCCCEEEEeeCC
Confidence 68999999999999999999999875
No 103
>PRK05993 short chain dehydrogenase; Provisional
Probab=84.88 E-value=3.3 Score=39.74 Aligned_cols=26 Identities=15% Similarity=0.230 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|+.|.++|+.|+.+.|+
T Consensus 12 asggiG~~la~~l~~~G~~Vi~~~r~ 37 (277)
T PRK05993 12 CSSGIGAYCARALQSDGWRVFATCRK 37 (277)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 57899999999999999999998875
No 104
>PRK06123 short chain dehydrogenase; Provisional
Probab=84.87 E-value=4 Score=37.91 Aligned_cols=26 Identities=31% Similarity=0.430 Sum_probs=22.4
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|++|+++|+.|++..+.
T Consensus 10 ~~~~iG~~~a~~l~~~G~~vv~~~~~ 35 (248)
T PRK06123 10 ASRGIGAATALLAAERGYAVCLNYLR 35 (248)
T ss_pred CCchHHHHHHHHHHHCCCeEEEecCC
Confidence 47889999999999999999877643
No 105
>PRK08628 short chain dehydrogenase; Provisional
Probab=84.66 E-value=3.1 Score=39.09 Aligned_cols=32 Identities=19% Similarity=0.101 Sum_probs=25.8
Q ss_pred eEEecCCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 154 RFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 154 RfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
-.|+-- +|..|.++|+.|+++|+.|+++.++.
T Consensus 10 ilItGa-sggiG~~la~~l~~~G~~v~~~~r~~ 41 (258)
T PRK08628 10 VIVTGG-ASGIGAAISLRLAEEGAIPVIFGRSA 41 (258)
T ss_pred EEEeCC-CChHHHHHHHHHHHcCCcEEEEcCCh
Confidence 345554 57799999999999999999987753
No 106
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=84.64 E-value=4 Score=38.43 Aligned_cols=32 Identities=22% Similarity=0.368 Sum_probs=25.5
Q ss_pred eeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 153 VRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 153 VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+-.|+-- +|-.|.++|+.|.++|+.|+++.+.
T Consensus 9 ~~lItGa-s~gIG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T PRK06463 9 VALITGG-TRGIGRAIAEAFLREGAKVAVLYNS 40 (255)
T ss_pred EEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3345554 5789999999999999999987654
No 107
>PRK05875 short chain dehydrogenase; Provisional
Probab=84.58 E-value=3.5 Score=39.24 Aligned_cols=30 Identities=23% Similarity=0.271 Sum_probs=25.0
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+- .+|..|.++|+.|+++||.|+++.++
T Consensus 11 lItG-asg~IG~~la~~l~~~G~~V~~~~r~ 40 (276)
T PRK05875 11 LVTG-GGSGIGKGVAAGLVAAGAAVMIVGRN 40 (276)
T ss_pred EEEC-CCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3443 56779999999999999999998875
No 108
>PRK06172 short chain dehydrogenase; Provisional
Probab=84.54 E-value=3.3 Score=38.80 Aligned_cols=27 Identities=19% Similarity=0.244 Sum_probs=24.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.+|..|.++|+.|+++|+.|+.+.|+.
T Consensus 15 as~~iG~~ia~~l~~~G~~v~~~~r~~ 41 (253)
T PRK06172 15 GAAGIGRATALAFAREGAKVVVADRDA 41 (253)
T ss_pred CCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 578899999999999999999988753
No 109
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=84.50 E-value=3.7 Score=38.33 Aligned_cols=26 Identities=23% Similarity=0.275 Sum_probs=23.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|-.|.++|+.+++.|+.|+.+.++
T Consensus 8 ~sg~iG~~la~~l~~~G~~v~~~~r~ 33 (254)
T TIGR02415 8 GAQGIGKGIAERLAKDGFAVAVADLN 33 (254)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57889999999999999999998875
No 110
>PRK09134 short chain dehydrogenase; Provisional
Probab=84.49 E-value=3.9 Score=38.52 Aligned_cols=30 Identities=20% Similarity=0.262 Sum_probs=24.6
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+|+ =.+|-.|.++|+.|+++|+.|+.+.+.
T Consensus 13 lIt-Gas~giG~~la~~l~~~g~~v~~~~~~ 42 (258)
T PRK09134 13 LVT-GAARRIGRAIALDLAAHGFDVAVHYNR 42 (258)
T ss_pred EEe-CCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 344 356899999999999999999887664
No 111
>PRK06483 dihydromonapterin reductase; Provisional
Probab=84.32 E-value=4.6 Score=37.43 Aligned_cols=27 Identities=22% Similarity=0.271 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.+|..|.++|+.|+++|+.|+.+.++.
T Consensus 10 as~gIG~~ia~~l~~~G~~V~~~~r~~ 36 (236)
T PRK06483 10 AGQRIGLALAWHLLAQGQPVIVSYRTH 36 (236)
T ss_pred CCChHHHHHHHHHHHCCCeEEEEeCCc
Confidence 467899999999999999999988753
No 112
>PRK06523 short chain dehydrogenase; Provisional
Probab=84.30 E-value=3.1 Score=39.13 Aligned_cols=30 Identities=23% Similarity=0.318 Sum_probs=25.3
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+- .||..|.++|+.|.++|+.|+.+.|.
T Consensus 13 lItG-as~gIG~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 13 LVTG-GTKGIGAATVARLLEAGARVVTTARS 42 (260)
T ss_pred EEEC-CCCchhHHHHHHHHHCCCEEEEEeCC
Confidence 4444 46679999999999999999999875
No 113
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=84.21 E-value=3.9 Score=38.14 Aligned_cols=32 Identities=25% Similarity=0.184 Sum_probs=25.3
Q ss_pred eeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 153 VRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 153 VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+-.|+.- +|..|.++|+.|+++|+.|+.+.+.
T Consensus 10 ~vlItGa-s~~iG~~la~~l~~~G~~v~~~~~~ 41 (252)
T PRK08220 10 TVWVTGA-AQGIGYAVALAFVEAGAKVIGFDQA 41 (252)
T ss_pred EEEEeCC-CchHHHHHHHHHHHCCCEEEEEecc
Confidence 3444444 4677999999999999999999875
No 114
>PRK07832 short chain dehydrogenase; Provisional
Probab=84.15 E-value=6.9 Score=37.29 Aligned_cols=26 Identities=15% Similarity=0.213 Sum_probs=22.9
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|+++|+.|+++.++
T Consensus 8 as~giG~~la~~la~~G~~vv~~~r~ 33 (272)
T PRK07832 8 AASGIGRATALRLAAQGAELFLTDRD 33 (272)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999999999988764
No 115
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=84.06 E-value=3.5 Score=39.36 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=25.6
Q ss_pred eeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 153 VRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 153 VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+-.|+.- +|-.|.++|+.|+++|+.|+++.+.
T Consensus 12 ~vlVtGa-s~giG~~ia~~l~~~G~~V~~~~r~ 43 (278)
T PRK08277 12 VAVITGG-GGVLGGAMAKELARAGAKVAILDRN 43 (278)
T ss_pred EEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3345444 4679999999999999999998875
No 116
>PRK06181 short chain dehydrogenase; Provisional
Probab=84.05 E-value=3.9 Score=38.55 Aligned_cols=26 Identities=8% Similarity=0.125 Sum_probs=23.4
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.++++|+.|+.+.+.
T Consensus 9 asg~iG~~la~~l~~~g~~Vi~~~r~ 34 (263)
T PRK06181 9 ASEGIGRALAVRLARAGAQLVLAARN 34 (263)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999999999999875
No 117
>PRK06949 short chain dehydrogenase; Provisional
Probab=83.94 E-value=4 Score=38.22 Aligned_cols=27 Identities=15% Similarity=0.167 Sum_probs=24.4
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 159 FSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 159 fSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
=.+|..|.++|+.|.+.|+.|+.+.++
T Consensus 16 Gasg~IG~~~a~~l~~~G~~Vi~~~r~ 42 (258)
T PRK06949 16 GASSGLGARFAQVLAQAGAKVVLASRR 42 (258)
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 368899999999999999999998875
No 118
>PRK07074 short chain dehydrogenase; Provisional
Probab=83.93 E-value=5.3 Score=37.45 Aligned_cols=30 Identities=27% Similarity=0.304 Sum_probs=24.0
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+-- +|..|.++|+.|+++|+.|+.+.++
T Consensus 6 lItGa-t~~iG~~la~~L~~~g~~v~~~~r~ 35 (257)
T PRK07074 6 LVTGA-AGGIGQALARRFLAAGDRVLALDID 35 (257)
T ss_pred EEECC-cchHHHHHHHHHHHCCCEEEEEeCC
Confidence 34444 4458999999999999999998775
No 119
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=83.87 E-value=4 Score=38.26 Aligned_cols=31 Identities=23% Similarity=0.140 Sum_probs=25.8
Q ss_pred eEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 154 RFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 154 RfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
=.|+. .+|..|.++|+.|+++|+.|+.+.+.
T Consensus 14 ilItG-as~~IG~~la~~l~~~G~~v~~~~r~ 44 (256)
T PRK06124 14 ALVTG-SARGLGFEIARALAGAGAHVLVNGRN 44 (256)
T ss_pred EEEEC-CCchHHHHHHHHHHHcCCeEEEEeCC
Confidence 34555 56778999999999999999999875
No 120
>PRK06139 short chain dehydrogenase; Provisional
Probab=83.83 E-value=3.9 Score=40.94 Aligned_cols=30 Identities=13% Similarity=0.289 Sum_probs=24.9
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+-- ||-.|.++|+.|+++|+.|+++.|.
T Consensus 11 lITGA-s~GIG~aia~~la~~G~~Vvl~~R~ 40 (330)
T PRK06139 11 VITGA-SSGIGQATAEAFARRGARLVLAARD 40 (330)
T ss_pred EEcCC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 34444 5789999999999999999998875
No 121
>PRK07806 short chain dehydrogenase; Provisional
Probab=83.83 E-value=6.5 Score=36.56 Aligned_cols=26 Identities=23% Similarity=0.332 Sum_probs=23.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++++.|++.|+.|+.+.|.
T Consensus 14 asggiG~~l~~~l~~~G~~V~~~~r~ 39 (248)
T PRK07806 14 SSRGIGADTAKILAGAGAHVVVNYRQ 39 (248)
T ss_pred CCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 56789999999999999999988775
No 122
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=83.70 E-value=4.5 Score=37.31 Aligned_cols=26 Identities=27% Similarity=0.258 Sum_probs=23.0
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|+++|+.|+.+.++
T Consensus 13 as~~iG~~ia~~l~~~G~~v~~~~r~ 38 (235)
T PRK06550 13 AASGIGLAQARAFLAQGAQVYGVDKQ 38 (235)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 46788999999999999999988765
No 123
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=83.70 E-value=5 Score=36.84 Aligned_cols=27 Identities=15% Similarity=0.293 Sum_probs=23.6
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.+|-.|..+|+.|+++||.|+.+.++.
T Consensus 6 ~~g~iG~~la~~l~~~G~~v~~~~r~~ 32 (239)
T TIGR01830 6 ASRGIGRAIALKLAKEGAKVIITYRSS 32 (239)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 467789999999999999999998753
No 124
>PRK06500 short chain dehydrogenase; Provisional
Probab=83.63 E-value=5 Score=37.23 Aligned_cols=26 Identities=15% Similarity=0.221 Sum_probs=23.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|++|+++|+.|+++.++
T Consensus 14 asg~iG~~la~~l~~~g~~v~~~~r~ 39 (249)
T PRK06500 14 GTSGIGLETARQFLAEGARVAITGRD 39 (249)
T ss_pred CCchHHHHHHHHHHHCCCEEEEecCC
Confidence 46889999999999999999988764
No 125
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=83.61 E-value=4.6 Score=38.08 Aligned_cols=26 Identities=8% Similarity=0.098 Sum_probs=23.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|-.|.++|+.|++.|+.|+.+.+.
T Consensus 23 as~gIG~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 23 GNTGLGQGYAVALAKAGADIIITTHG 48 (258)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 46788999999999999999998775
No 126
>PRK06057 short chain dehydrogenase; Provisional
Probab=83.53 E-value=6.6 Score=36.92 Aligned_cols=27 Identities=11% Similarity=0.070 Sum_probs=23.8
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 159 FSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 159 fSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
=.||-.|.++|++|+++|+.|+.+.+.
T Consensus 14 GasggIG~~~a~~l~~~G~~v~~~~r~ 40 (255)
T PRK06057 14 GGGSGIGLATARRLAAEGATVVVGDID 40 (255)
T ss_pred CCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 356889999999999999999998774
No 127
>PRK07454 short chain dehydrogenase; Provisional
Probab=83.49 E-value=3.9 Score=37.97 Aligned_cols=30 Identities=13% Similarity=0.358 Sum_probs=25.7
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+- .+|..|.++|+.|+++|+.|+.+.|+
T Consensus 10 lItG-~sg~iG~~la~~l~~~G~~V~~~~r~ 39 (241)
T PRK07454 10 LITG-ASSGIGKATALAFAKAGWDLALVARS 39 (241)
T ss_pred EEeC-CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4443 57899999999999999999998875
No 128
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=83.46 E-value=3.7 Score=38.80 Aligned_cols=30 Identities=10% Similarity=0.054 Sum_probs=24.6
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||- .||-.|.++|+.|++.|+.|+.+.+.
T Consensus 12 lItG-as~gIG~aia~~l~~~G~~vv~~~~~ 41 (251)
T PRK12481 12 IITG-CNTGLGQGMAIGLAKAGADIVGVGVA 41 (251)
T ss_pred EEeC-CCchHHHHHHHHHHHCCCEEEEecCc
Confidence 4444 46789999999999999999988664
No 129
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=83.20 E-value=1.1 Score=43.85 Aligned_cols=26 Identities=23% Similarity=0.418 Sum_probs=23.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+||..|.+++++|..+|+.|+-+.++
T Consensus 8 asG~lG~~l~~~l~~~~~~v~~~~r~ 33 (286)
T PF04321_consen 8 ASGFLGSALARALKERGYEVIATSRS 33 (286)
T ss_dssp TTSHHHHHHHHHHTTTSEEEEEESTT
T ss_pred CCCHHHHHHHHHHhhCCCEEEEeCch
Confidence 78999999999999999999988665
No 130
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=83.17 E-value=8.3 Score=36.68 Aligned_cols=34 Identities=12% Similarity=0.152 Sum_probs=27.8
Q ss_pred ceeEEecCC-CChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 152 TVRFVDNFS-AGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 152 ~VRfIdNfS-SG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+=.|+=-| |+-.|.++|+.|+++|+.|++..+.
T Consensus 8 k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~ 42 (257)
T PRK08594 8 KTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAG 42 (257)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCc
Confidence 344577766 4889999999999999999998764
No 131
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=83.01 E-value=8.5 Score=36.54 Aligned_cols=34 Identities=15% Similarity=0.018 Sum_probs=28.1
Q ss_pred ceeEEecCC-CChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 152 TVRFVDNFS-AGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 152 ~VRfIdNfS-SG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+-.||--+ |+-.|.++|+.|+++|+.|++..+.
T Consensus 8 k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~ 42 (256)
T PRK07889 8 KRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFG 42 (256)
T ss_pred CEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCc
Confidence 455677775 6789999999999999999987654
No 132
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=82.97 E-value=9.8 Score=36.13 Aligned_cols=30 Identities=23% Similarity=0.367 Sum_probs=24.0
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||=-| |-.|.++|+.|+++|+.|+++.++
T Consensus 5 lITGas-~gIG~~~a~~l~~~G~~V~~~~~~ 34 (267)
T TIGR02685 5 VVTGAA-KRIGSSIAVALHQEGYRVVLHYHR 34 (267)
T ss_pred EEeCCC-CcHHHHHHHHHHhCCCeEEEEcCC
Confidence 344445 459999999999999999988764
No 133
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=82.69 E-value=6.2 Score=36.65 Aligned_cols=26 Identities=15% Similarity=0.124 Sum_probs=23.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|++|+.+||.|+++.++
T Consensus 14 asg~iG~~l~~~l~~~g~~v~~~~~~ 39 (252)
T PRK06077 14 SGRGIGRAIAVRLAKEGSLVVVNAKK 39 (252)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 67889999999999999999887664
No 134
>PRK06484 short chain dehydrogenase; Validated
Probab=82.56 E-value=4.4 Score=42.56 Aligned_cols=34 Identities=26% Similarity=0.378 Sum_probs=27.2
Q ss_pred ceeeeecCCcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 5 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 5 ~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.+=+|+-=|+| -|.++|+.|+++|+.|+++.|..
T Consensus 6 k~~lITGas~g-IG~aia~~l~~~G~~V~~~~r~~ 39 (520)
T PRK06484 6 RVVLVTGAAGG-IGRAACQRFARAGDQVVVADRNV 39 (520)
T ss_pred eEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCH
Confidence 34466665554 89999999999999999998854
No 135
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=82.55 E-value=4.2 Score=36.14 Aligned_cols=28 Identities=14% Similarity=0.198 Sum_probs=25.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccCc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTCV 187 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~~ 187 (400)
.||..|..++++++++|++|+.+.|+..
T Consensus 6 atG~vG~~l~~~L~~~~~~V~~~~R~~~ 33 (183)
T PF13460_consen 6 ATGFVGRALAKQLLRRGHEVTALVRSPS 33 (183)
T ss_dssp TTSHHHHHHHHHHHHTTSEEEEEESSGG
T ss_pred CCChHHHHHHHHHHHCCCEEEEEecCch
Confidence 5899999999999999999999999743
No 136
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=82.45 E-value=4.4 Score=39.26 Aligned_cols=27 Identities=26% Similarity=0.385 Sum_probs=24.5
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
++|..|..+|+.|+++||.|+.+.++.
T Consensus 8 ~~G~iG~~l~~~L~~~g~~V~~~~r~~ 34 (328)
T TIGR03466 8 ATGFVGSAVVRLLLEQGEEVRVLVRPT 34 (328)
T ss_pred CccchhHHHHHHHHHCCCEEEEEEecC
Confidence 579999999999999999999998853
No 137
>PRK08264 short chain dehydrogenase; Validated
Probab=82.26 E-value=4.2 Score=37.64 Aligned_cols=26 Identities=19% Similarity=0.181 Sum_probs=23.7
Q ss_pred CCChhHHHHHHHHHHCCC-EEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGY-AVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~-~Vifl~~~ 185 (400)
.||..|.++|+.|+++|+ .|+.+.|+
T Consensus 14 gsg~iG~~la~~l~~~G~~~V~~~~r~ 40 (238)
T PRK08264 14 ANRGIGRAFVEQLLARGAAKVYAAARD 40 (238)
T ss_pred CCchHHHHHHHHHHHCCcccEEEEecC
Confidence 589999999999999999 99888875
No 138
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=82.11 E-value=7.9 Score=36.83 Aligned_cols=34 Identities=9% Similarity=0.222 Sum_probs=28.4
Q ss_pred ceeEEecCCCC-hhHHHHHHHHHHCCCEEEEEecc
Q psy14323 152 TVRFVDNFSAG-TRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 152 ~VRfIdNfSSG-~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+=+||=-|+| -.|.++|+.|+++||.|++..+.
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~ 43 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQS 43 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCc
Confidence 45578888886 59999999999999999987654
No 139
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=82.04 E-value=4.9 Score=37.34 Aligned_cols=26 Identities=23% Similarity=0.344 Sum_probs=23.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|++|++.|+.|+.+.++
T Consensus 11 as~~iG~~la~~l~~~g~~v~~~~r~ 36 (250)
T TIGR03206 11 GGGGIGGATCRRFAEEGAKVAVFDLN 36 (250)
T ss_pred CCChHHHHHHHHHHHCCCEEEEecCC
Confidence 46889999999999999999988765
No 140
>PLN02778 3,5-epimerase/4-reductase
Probab=81.99 E-value=3.2 Score=40.75 Aligned_cols=30 Identities=20% Similarity=0.124 Sum_probs=24.9
Q ss_pred eEEecCCCChhHHHHHHHHHHCCCEEEEEe
Q psy14323 154 RFVDNFSAGTRGASSVEYFVEQGYAVLFVY 183 (400)
Q Consensus 154 RfIdNfSSG~~GaaiAe~fl~~G~~Vifl~ 183 (400)
|++=-=++|-.|..++++++++|++|++..
T Consensus 11 kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~ 40 (298)
T PLN02778 11 KFLIYGKTGWIGGLLGKLCQEQGIDFHYGS 40 (298)
T ss_pred eEEEECCCCHHHHHHHHHHHhCCCEEEEec
Confidence 445455899999999999999999998644
No 141
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=81.81 E-value=7.8 Score=37.21 Aligned_cols=34 Identities=12% Similarity=0.171 Sum_probs=27.7
Q ss_pred ceeEEecCCC-ChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 152 TVRFVDNFSA-GTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 152 ~VRfIdNfSS-G~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+=.||--|+ +-.|.++|+.|+++|+.|++.++.
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~ 41 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN 41 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc
Confidence 3446777776 489999999999999999887664
No 142
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=81.70 E-value=11 Score=35.62 Aligned_cols=35 Identities=11% Similarity=0.104 Sum_probs=29.6
Q ss_pred CceeEEecCCC-ChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 151 NTVRFVDNFSA-GTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 151 d~VRfIdNfSS-G~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+.+=.||--|+ +-.|.++|+.|+++|+.|++..+.
T Consensus 10 ~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~ 45 (258)
T PRK07533 10 GKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLN 45 (258)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 34557888888 489999999999999999988775
No 143
>PRK06128 oxidoreductase; Provisional
Probab=81.68 E-value=5.1 Score=39.00 Aligned_cols=26 Identities=15% Similarity=0.287 Sum_probs=22.9
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|-.|.++|+.|++.|+.|++.+++
T Consensus 63 as~gIG~~~a~~l~~~G~~V~i~~~~ 88 (300)
T PRK06128 63 ADSGIGRATAIAFAREGADIALNYLP 88 (300)
T ss_pred CCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 46788999999999999999988764
No 144
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=81.47 E-value=3.7 Score=39.26 Aligned_cols=26 Identities=23% Similarity=0.339 Sum_probs=23.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.+++++++++||+|+.+.|.
T Consensus 7 ~tG~iG~~l~~~l~~~g~~v~~~~r~ 32 (287)
T TIGR01214 7 ANGQLGRELVQQLSPEGRVVVALTSS 32 (287)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence 57999999999999999999988774
No 145
>PRK05872 short chain dehydrogenase; Provisional
Probab=81.30 E-value=7.4 Score=37.86 Aligned_cols=26 Identities=19% Similarity=0.147 Sum_probs=23.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||-.|.++|+.|.++|+.|+.+.+.
T Consensus 17 as~gIG~~ia~~l~~~G~~V~~~~r~ 42 (296)
T PRK05872 17 AARGIGAELARRLHARGAKLALVDLE 42 (296)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 56789999999999999999988774
No 146
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=81.24 E-value=6.9 Score=37.68 Aligned_cols=35 Identities=9% Similarity=0.083 Sum_probs=28.8
Q ss_pred CceeEEecCC-CChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 151 NTVRFVDNFS-AGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 151 d~VRfIdNfS-SG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+.+=.|+--| ++-.|.++|+.|++.|+.|++.+|.
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~ 45 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQG 45 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc
Confidence 3456677776 5889999999999999999887653
No 147
>PRK09242 tropinone reductase; Provisional
Probab=81.23 E-value=5.6 Score=37.37 Aligned_cols=30 Identities=20% Similarity=0.285 Sum_probs=25.1
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+- .+|..|.++|+.+.++|++|+++.+.
T Consensus 13 lItG-a~~gIG~~~a~~l~~~G~~v~~~~r~ 42 (257)
T PRK09242 13 LITG-ASKGIGLAIAREFLGLGADVLIVARD 42 (257)
T ss_pred EEeC-CCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 3443 46789999999999999999999875
No 148
>PRK07825 short chain dehydrogenase; Provisional
Probab=81.11 E-value=7.2 Score=37.06 Aligned_cols=26 Identities=15% Similarity=0.052 Sum_probs=22.9
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|+.++++|+.|+...|+
T Consensus 13 asggiG~~la~~l~~~G~~v~~~~r~ 38 (273)
T PRK07825 13 GARGIGLATARALAALGARVAIGDLD 38 (273)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEECC
Confidence 46789999999999999999988764
No 149
>PRK07985 oxidoreductase; Provisional
Probab=81.05 E-value=6.8 Score=38.18 Aligned_cols=30 Identities=17% Similarity=0.286 Sum_probs=24.5
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+- .+|-.|.++|+.|+++|+.|++..++
T Consensus 53 lITG-as~gIG~aia~~L~~~G~~Vi~~~~~ 82 (294)
T PRK07985 53 LVTG-GDSGIGRAAAIAYAREGADVAISYLP 82 (294)
T ss_pred EEEC-CCCcHHHHHHHHHHHCCCEEEEecCC
Confidence 3444 46889999999999999999887654
No 150
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=80.90 E-value=6.8 Score=36.19 Aligned_cols=26 Identities=19% Similarity=0.405 Sum_probs=22.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++++.|+++|+.|+++.+.
T Consensus 9 a~g~iG~~l~~~l~~~g~~v~~~~~~ 34 (247)
T PRK09730 9 GSRGIGRATALLLAQEGYTVAVNYQQ 34 (247)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 46889999999999999999876543
No 151
>PRK09072 short chain dehydrogenase; Provisional
Probab=80.83 E-value=3.8 Score=38.78 Aligned_cols=26 Identities=23% Similarity=0.327 Sum_probs=23.6
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||-.|.++|+.++++||.|+.+.|+
T Consensus 13 ~s~~iG~~ia~~l~~~G~~V~~~~r~ 38 (263)
T PRK09072 13 ASGGIGQALAEALAAAGARLLLVGRN 38 (263)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEECC
Confidence 56889999999999999999999875
No 152
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=80.66 E-value=9.1 Score=35.92 Aligned_cols=26 Identities=27% Similarity=0.261 Sum_probs=23.6
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|+++||.|+.+.++
T Consensus 10 ~~~~IG~~la~~l~~~g~~vi~~~r~ 35 (259)
T PRK12384 10 GGQTLGAFLCHGLAEEGYRVAVADIN 35 (259)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 56889999999999999999999875
No 153
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=80.64 E-value=6.9 Score=36.13 Aligned_cols=26 Identities=19% Similarity=0.174 Sum_probs=21.5
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|+++|+.|++..+.
T Consensus 14 a~g~iG~~la~~l~~~g~~v~~~~~~ 39 (245)
T PRK12936 14 ASGGIGEEIARLLHAQGAIVGLHGTR 39 (245)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 46889999999999999988765543
No 154
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=80.61 E-value=6.6 Score=38.63 Aligned_cols=30 Identities=20% Similarity=0.329 Sum_probs=25.2
Q ss_pred EecCCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 156 VDNFSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 156 IdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
||--| +-.|.++|+.|.++||.|+++.|+.
T Consensus 11 ITGAS-sGIG~~~A~~lA~~g~~liLvaR~~ 40 (265)
T COG0300 11 ITGAS-SGIGAELAKQLARRGYNLILVARRE 40 (265)
T ss_pred EECCC-chHHHHHHHHHHHCCCEEEEEeCcH
Confidence 44444 4579999999999999999999974
No 155
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=80.60 E-value=6.5 Score=38.64 Aligned_cols=30 Identities=10% Similarity=0.336 Sum_probs=24.7
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||- .+|-.|.++|+.|+++|+.|+++.|.
T Consensus 10 lVTG-as~gIG~~~a~~L~~~G~~V~~~~r~ 39 (322)
T PRK07453 10 IITG-ASSGVGLYAAKALAKRGWHVIMACRN 39 (322)
T ss_pred EEEc-CCChHHHHHHHHHHHCCCEEEEEECC
Confidence 3444 45779999999999999999998765
No 156
>PRK06484 short chain dehydrogenase; Validated
Probab=80.39 E-value=8.6 Score=40.40 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=27.6
Q ss_pred CceeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 151 NTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 151 d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+.+-.||--|+| .|.++|+.|.++|+.|+++.++
T Consensus 5 ~k~~lITGas~g-IG~aia~~l~~~G~~V~~~~r~ 38 (520)
T PRK06484 5 SRVVLVTGAAGG-IGRAACQRFARAGDQVVVADRN 38 (520)
T ss_pred CeEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCC
Confidence 345567776555 9999999999999999998875
No 157
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=80.27 E-value=7 Score=36.13 Aligned_cols=26 Identities=12% Similarity=0.291 Sum_probs=22.7
Q ss_pred CChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 161 AGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 161 SG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
+|-.|.++|+.|.++|++|+++.++.
T Consensus 7 s~giG~~~a~~l~~~G~~v~~~~~~~ 32 (239)
T TIGR01831 7 SRGIGRAIANRLAADGFEICVHYHSG 32 (239)
T ss_pred CchHHHHHHHHHHHCCCEEEEEeCCC
Confidence 56779999999999999999888753
No 158
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=80.08 E-value=8.3 Score=35.55 Aligned_cols=26 Identities=19% Similarity=0.328 Sum_probs=22.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEE-ecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFV-YST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl-~~~ 185 (400)
.||..|.++|+.|+++|+.|+.+ .+.
T Consensus 13 asg~iG~~la~~l~~~g~~v~~~~~r~ 39 (247)
T PRK05565 13 ASGGIGRAIAELLAKEGAKVVIAYDIN 39 (247)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 46899999999999999999988 553
No 159
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=80.03 E-value=9.1 Score=35.30 Aligned_cols=27 Identities=19% Similarity=0.357 Sum_probs=24.4
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.+|..|.++|+.|.++|+.|+.+.++.
T Consensus 10 ~s~~iG~~la~~l~~~g~~vi~~~r~~ 36 (245)
T PRK12824 10 AKRGIGSAIARELLNDGYRVIATYFSG 36 (245)
T ss_pred CCchHHHHHHHHHHHcCCEEEEEeCCc
Confidence 588899999999999999999998763
No 160
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=80.00 E-value=8.3 Score=36.26 Aligned_cols=32 Identities=22% Similarity=0.380 Sum_probs=27.3
Q ss_pred eEEecCCC-ChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 154 RFVDNFSA-GTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 154 RfIdNfSS-G~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
=.|+--|+ |-.|.++|+.|+++||.|+++.|.
T Consensus 8 vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 8 ALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 46777665 789999999999999999998775
No 161
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=79.94 E-value=3.2 Score=39.91 Aligned_cols=25 Identities=20% Similarity=0.340 Sum_probs=21.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEec
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYS 184 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~ 184 (400)
.||..|..++++|+++|++|+.+.+
T Consensus 5 a~GfiG~~l~~~L~~~g~~v~~~~~ 29 (306)
T PLN02725 5 HRGLVGSAIVRKLEALGFTNLVLRT 29 (306)
T ss_pred CCCcccHHHHHHHHhCCCcEEEeec
Confidence 4799999999999999999886643
No 162
>PRK09186 flagellin modification protein A; Provisional
Probab=79.72 E-value=11 Score=35.15 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=26.4
Q ss_pred ceeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 152 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 152 ~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+-.|+.- ||..|.++|+.|+++||.|+.+.++
T Consensus 5 k~vlItGa-s~giG~~~a~~l~~~g~~v~~~~r~ 37 (256)
T PRK09186 5 KTILITGA-GGLIGSALVKAILEAGGIVIAADID 37 (256)
T ss_pred CEEEEECC-CchHHHHHHHHHHHCCCEEEEEecC
Confidence 33455655 4679999999999999999998764
No 163
>PRK05866 short chain dehydrogenase; Provisional
Probab=79.69 E-value=6.3 Score=38.44 Aligned_cols=30 Identities=20% Similarity=0.355 Sum_probs=25.1
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+- .+|..|.++|+.|+++|+.|+++.|+
T Consensus 44 lItG-asggIG~~la~~La~~G~~Vi~~~R~ 73 (293)
T PRK05866 44 LLTG-ASSGIGEAAAEQFARRGATVVAVARR 73 (293)
T ss_pred EEeC-CCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4444 46778999999999999999999875
No 164
>PRK07775 short chain dehydrogenase; Provisional
Probab=79.62 E-value=6.3 Score=37.72 Aligned_cols=30 Identities=17% Similarity=0.258 Sum_probs=25.0
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+|+- .+|-.|.++|+.|+.+|+.|+.+.++
T Consensus 14 lVtG-a~g~iG~~la~~L~~~G~~V~~~~r~ 43 (274)
T PRK07775 14 LVAG-ASSGIGAATAIELAAAGFPVALGARR 43 (274)
T ss_pred EEEC-CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4555 46788999999999999999888764
No 165
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=79.26 E-value=14 Score=35.16 Aligned_cols=34 Identities=9% Similarity=0.076 Sum_probs=27.6
Q ss_pred ceeEEecCC-CChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 152 TVRFVDNFS-AGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 152 ~VRfIdNfS-SG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+=.||--| ++-.|.++|+.|++.|+.|++.+++
T Consensus 7 k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~ 41 (258)
T PRK07370 7 KKALVTGIANNRSIAWGIAQQLHAAGAELGITYLP 41 (258)
T ss_pred cEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecC
Confidence 344677775 5889999999999999999887653
No 166
>PRK06198 short chain dehydrogenase; Provisional
Probab=79.20 E-value=7 Score=36.62 Aligned_cols=30 Identities=23% Similarity=0.324 Sum_probs=24.3
Q ss_pred EEecCCCChhHHHHHHHHHHCCCE-EEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYA-VLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~-Vifl~~~ 185 (400)
.|+- .+|..|..+|+.|.++|+. |+.+.|.
T Consensus 10 lItG-a~g~iG~~la~~l~~~G~~~V~~~~r~ 40 (260)
T PRK06198 10 LVTG-GTQGLGAAIARAFAERGAAGLVICGRN 40 (260)
T ss_pred EEeC-CCchHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4444 4566999999999999999 8888775
No 167
>PRK06914 short chain dehydrogenase; Provisional
Probab=79.19 E-value=8.2 Score=36.74 Aligned_cols=26 Identities=15% Similarity=0.253 Sum_probs=23.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|+.++++||.|+.+.|+
T Consensus 11 asg~iG~~la~~l~~~G~~V~~~~r~ 36 (280)
T PRK06914 11 ASSGFGLLTTLELAKKGYLVIATMRN 36 (280)
T ss_pred CCchHHHHHHHHHHhCCCEEEEEeCC
Confidence 57788999999999999999988765
No 168
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=79.18 E-value=2.9 Score=40.60 Aligned_cols=27 Identities=22% Similarity=0.349 Sum_probs=23.5
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.+|..|..+++.+++.|++|+.+.+..
T Consensus 7 a~GfiG~~l~~~L~~~g~~~v~~~~~~ 33 (308)
T PRK11150 7 GAGFIGSNIVKALNDKGITDILVVDNL 33 (308)
T ss_pred CCcHHHHHHHHHHHhCCCceEEEecCC
Confidence 579999999999999999888877653
No 169
>PRK12747 short chain dehydrogenase; Provisional
Probab=78.78 E-value=15 Score=34.27 Aligned_cols=29 Identities=17% Similarity=0.287 Sum_probs=23.3
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEec
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYS 184 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~ 184 (400)
.||- .+|-.|.++|+.|++.|+.|++..+
T Consensus 8 lItG-as~gIG~~ia~~l~~~G~~v~~~~~ 36 (252)
T PRK12747 8 LVTG-ASRGIGRAIAKRLANDGALVAIHYG 36 (252)
T ss_pred EEeC-CCChHHHHHHHHHHHCCCeEEEEcC
Confidence 4555 4566899999999999999988754
No 170
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=78.30 E-value=7.8 Score=36.93 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=27.5
Q ss_pred ceeEEecC-CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 152 TVRFVDNF-SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 152 ~VRfIdNf-SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+=.||-- |++-.|.++|+.|+++|+.|++.++.
T Consensus 7 k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~ 41 (261)
T PRK08690 7 KKILITGMISERSIAYGIAKACREQGAELAFTYVV 41 (261)
T ss_pred cEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc
Confidence 34467776 46789999999999999999987653
No 171
>PRK08278 short chain dehydrogenase; Provisional
Probab=78.09 E-value=11 Score=36.17 Aligned_cols=31 Identities=13% Similarity=0.164 Sum_probs=25.0
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.|+-- +|-.|.++|+.|+++|+.|+.+.++.
T Consensus 10 lItGa-s~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (273)
T PRK08278 10 FITGA-SRGIGLAIALRAARDGANIVIAAKTA 40 (273)
T ss_pred EEECC-CchHHHHHHHHHHHCCCEEEEEeccc
Confidence 34444 56779999999999999999998753
No 172
>PLN00015 protochlorophyllide reductase
Probab=77.91 E-value=12 Score=36.78 Aligned_cols=26 Identities=15% Similarity=0.363 Sum_probs=22.4
Q ss_pred CCChhHHHHHHHHHHCC-CEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQG-YAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G-~~Vifl~~~ 185 (400)
.|+-.|.++|+.|+++| +.|++..|.
T Consensus 5 as~GIG~aia~~l~~~G~~~V~~~~r~ 31 (308)
T PLN00015 5 ASSGLGLATAKALAETGKWHVVMACRD 31 (308)
T ss_pred CCChHHHHHHHHHHHCCCCEEEEEeCC
Confidence 35678999999999999 999888764
No 173
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=77.75 E-value=12 Score=35.28 Aligned_cols=30 Identities=27% Similarity=0.392 Sum_probs=24.2
Q ss_pred EEecCCC-ChhHHHHHHHHHHCCCEEEEEec
Q psy14323 155 FVDNFSA-GTRGASSVEYFVEQGYAVLFVYS 184 (400)
Q Consensus 155 fIdNfSS-G~~GaaiAe~fl~~G~~Vifl~~ 184 (400)
.|+--|. |-.|.++|+.|+++|+.|++..+
T Consensus 10 lVtGas~~~giG~~~a~~l~~~G~~vi~~~~ 40 (256)
T PRK12859 10 VVTGVSRLDGIGAAICKELAEAGADIFFTYW 40 (256)
T ss_pred EEECCCCCCChHHHHHHHHHHCCCeEEEEec
Confidence 4555553 67999999999999999998754
No 174
>PRK05650 short chain dehydrogenase; Provisional
Probab=77.68 E-value=9 Score=36.39 Aligned_cols=26 Identities=12% Similarity=0.216 Sum_probs=23.5
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|+.+.++|+.|+++.+.
T Consensus 8 asggIG~~la~~l~~~g~~V~~~~r~ 33 (270)
T PRK05650 8 AASGLGRAIALRWAREGWRLALADVN 33 (270)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57889999999999999999998775
No 175
>PRK07576 short chain dehydrogenase; Provisional
Probab=77.49 E-value=7.1 Score=37.16 Aligned_cols=27 Identities=11% Similarity=0.043 Sum_probs=24.5
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 159 FSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 159 fSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
=.+|..|.++|+.|+++|+.|+.+.|.
T Consensus 16 GasggIG~~la~~l~~~G~~V~~~~r~ 42 (264)
T PRK07576 16 GGTSGINLGIAQAFARAGANVAVASRS 42 (264)
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 368899999999999999999999875
No 176
>PRK08017 oxidoreductase; Provisional
Probab=77.48 E-value=11 Score=35.21 Aligned_cols=26 Identities=19% Similarity=0.258 Sum_probs=23.4
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|+.+.++|+.|+.+.|+
T Consensus 10 asg~IG~~la~~l~~~g~~v~~~~r~ 35 (256)
T PRK08017 10 CSSGIGLEAALELKRRGYRVLAACRK 35 (256)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999999999999999988775
No 177
>PRK07791 short chain dehydrogenase; Provisional
Probab=77.46 E-value=9.4 Score=36.98 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=24.9
Q ss_pred eeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 153 VRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 153 VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+=.||-- +|-.|.++|+.|++.|+.|+++.+.
T Consensus 8 ~~lITGa-s~GIG~aia~~la~~G~~vii~~~~ 39 (286)
T PRK07791 8 VVIVTGA-GGGIGRAHALAFAAEGARVVVNDIG 39 (286)
T ss_pred EEEEECC-CchHHHHHHHHHHHCCCEEEEeeCC
Confidence 3345554 4578999999999999999988654
No 178
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=77.40 E-value=14 Score=32.01 Aligned_cols=26 Identities=15% Similarity=0.236 Sum_probs=20.2
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|+++|+.++.+.+.
T Consensus 8 a~~giG~~~a~~l~~~g~~~v~~~~r 33 (167)
T PF00106_consen 8 ASSGIGRALARALARRGARVVILTSR 33 (167)
T ss_dssp TTSHHHHHHHHHHHHTTTEEEEEEES
T ss_pred CCCHHHHHHHHHHHhcCceEEEEeee
Confidence 46889999999999997755555443
No 179
>PRK06701 short chain dehydrogenase; Provisional
Probab=77.33 E-value=9.1 Score=37.21 Aligned_cols=26 Identities=19% Similarity=0.353 Sum_probs=23.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|+++|+.|+++.+.
T Consensus 54 asggIG~~la~~l~~~G~~V~l~~r~ 79 (290)
T PRK06701 54 GDSGIGRAVAVLFAKEGADIAIVYLD 79 (290)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47778999999999999999988775
No 180
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=77.28 E-value=8.3 Score=37.81 Aligned_cols=32 Identities=19% Similarity=0.111 Sum_probs=25.0
Q ss_pred eeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 153 VRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 153 VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+=.|+-- +|-.|.++|+.|+++|+.|++..+.
T Consensus 14 ~~lVTGa-s~gIG~~ia~~L~~~Ga~Vv~~~~~ 45 (306)
T PRK07792 14 VAVVTGA-AAGLGRAEALGLARLGATVVVNDVA 45 (306)
T ss_pred EEEEECC-CChHHHHHHHHHHHCCCEEEEecCC
Confidence 3345544 4677999999999999999988754
No 181
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=77.23 E-value=6.8 Score=38.82 Aligned_cols=27 Identities=26% Similarity=0.470 Sum_probs=24.2
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.+|-.|..+++.++++|++|+.+.+..
T Consensus 8 atGfIG~~l~~~L~~~G~~V~~~~r~~ 34 (343)
T TIGR01472 8 ITGQDGSYLAEFLLEKGYEVHGLIRRS 34 (343)
T ss_pred CCCcHHHHHHHHHHHCCCEEEEEecCC
Confidence 579999999999999999999988753
No 182
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=76.64 E-value=13 Score=35.39 Aligned_cols=32 Identities=9% Similarity=0.140 Sum_probs=26.2
Q ss_pred eeEEecCC-CChhHHHHHHHHHHCCCEEEEEec
Q psy14323 153 VRFVDNFS-AGTRGASSVEYFVEQGYAVLFVYS 184 (400)
Q Consensus 153 VRfIdNfS-SG~~GaaiAe~fl~~G~~Vifl~~ 184 (400)
+=.||=-| ++-.|.++|+.|++.|+.|++.++
T Consensus 8 ~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~ 40 (260)
T PRK06997 8 RILITGLLSNRSIAYGIAKACKREGAELAFTYV 40 (260)
T ss_pred EEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEcc
Confidence 34566664 678999999999999999998764
No 183
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=76.52 E-value=15 Score=33.91 Aligned_cols=30 Identities=17% Similarity=0.334 Sum_probs=24.8
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+. .+|..|.++|+.++++|+.|+.+.+.
T Consensus 9 lItG-~~g~iG~~~a~~l~~~G~~vi~~~r~ 38 (253)
T PRK08217 9 VITG-GAQGLGRAMAEYLAQKGAKLALIDLN 38 (253)
T ss_pred EEEC-CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3444 46888999999999999999988775
No 184
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=76.46 E-value=6.6 Score=37.30 Aligned_cols=27 Identities=15% Similarity=0.219 Sum_probs=24.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
++|.-|..+++.++++||+|+.+.|..
T Consensus 6 atG~iG~~l~~~L~~~g~~V~~~~r~~ 32 (292)
T TIGR01777 6 GTGFIGRALTQRLTKDGHEVTILTRSP 32 (292)
T ss_pred ccchhhHHHHHHHHHcCCEEEEEeCCC
Confidence 589999999999999999999999864
No 185
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=76.35 E-value=6.4 Score=36.05 Aligned_cols=28 Identities=18% Similarity=0.344 Sum_probs=24.9
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccCc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTCV 187 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~~ 187 (400)
.+|..|.+++++++++|+.|+.+.+...
T Consensus 6 atG~iG~~l~~~l~~~g~~v~~~~~~~~ 33 (236)
T PF01370_consen 6 ATGFIGSALVRQLLKKGHEVIVLSRSSN 33 (236)
T ss_dssp TTSHHHHHHHHHHHHTTTEEEEEESCST
T ss_pred cCCHHHHHHHHHHHHcCCcccccccccc
Confidence 5899999999999999999998887643
No 186
>KOG1209|consensus
Probab=76.18 E-value=13 Score=35.99 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=32.8
Q ss_pred CceeEEecCCCChhHHHHHHHHHHCCCEEEEEeccCch
Q psy14323 151 NTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTCVE 188 (400)
Q Consensus 151 d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~~~ 188 (400)
-++=-|+--|+|-.|.++|.+|.+.||.|.--.|+..+
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~ 44 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEP 44 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccch
Confidence 34556889999999999999999999999998887543
No 187
>PRK07677 short chain dehydrogenase; Provisional
Probab=76.14 E-value=12 Score=35.08 Aligned_cols=25 Identities=24% Similarity=0.336 Sum_probs=22.3
Q ss_pred CChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 161 AGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 161 SG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+|..|.++|+.|+++|+.|+.+.+.
T Consensus 10 s~giG~~ia~~l~~~G~~Vi~~~r~ 34 (252)
T PRK07677 10 SSGMGKAMAKRFAEEGANVVITGRT 34 (252)
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5669999999999999999988775
No 188
>KOG1205|consensus
Probab=75.94 E-value=15 Score=36.58 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=31.3
Q ss_pred CceeEEecCCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 151 NTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 151 d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
+.|=.||--||| .|.++|.+++++|+.++++.|..
T Consensus 12 ~kvVvITGASsG-IG~~lA~~la~~G~~l~lvar~~ 46 (282)
T KOG1205|consen 12 GKVVLITGASSG-IGEALAYELAKRGAKLVLVARRA 46 (282)
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHhCCCceEEeehhh
Confidence 678889999998 59999999999999999998864
No 189
>CHL00194 ycf39 Ycf39; Provisional
Probab=75.75 E-value=6.1 Score=38.85 Aligned_cols=27 Identities=26% Similarity=0.410 Sum_probs=24.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.||..|..++++++++||+|+.+.|+.
T Consensus 8 atG~iG~~lv~~Ll~~g~~V~~l~R~~ 34 (317)
T CHL00194 8 ATGTLGRQIVRQALDEGYQVRCLVRNL 34 (317)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEEEcCh
Confidence 589999999999999999999998863
No 190
>PRK07060 short chain dehydrogenase; Provisional
Probab=75.65 E-value=13 Score=34.30 Aligned_cols=27 Identities=11% Similarity=0.092 Sum_probs=23.6
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 159 FSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 159 fSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
=.+|..|..+|+.|+++|+.|+.+.++
T Consensus 16 Ga~g~iG~~~a~~l~~~g~~V~~~~r~ 42 (245)
T PRK07060 16 GASSGIGRACAVALAQRGARVVAAARN 42 (245)
T ss_pred CCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence 346789999999999999999998875
No 191
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=75.54 E-value=18 Score=33.87 Aligned_cols=26 Identities=15% Similarity=0.146 Sum_probs=23.5
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.+.++|+.|+++.+.
T Consensus 19 ~s~gIG~~la~~l~~~G~~vv~~~r~ 44 (255)
T PRK06113 19 AGAGIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_pred CCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 67889999999999999999988764
No 192
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=75.49 E-value=12 Score=34.79 Aligned_cols=26 Identities=23% Similarity=0.354 Sum_probs=22.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|-.|.++|+.|++.||.|+.+.+.
T Consensus 13 as~gIG~~la~~l~~~G~~vv~~~~~ 38 (253)
T PRK08642 13 GSRGLGAAIARAFAREGARVVVNYHQ 38 (253)
T ss_pred CCCcHHHHHHHHHHHCCCeEEEEcCC
Confidence 47889999999999999999887654
No 193
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=75.25 E-value=14 Score=36.16 Aligned_cols=26 Identities=15% Similarity=0.313 Sum_probs=23.2
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|.-|..+|++|+++|++|+.+.+.
T Consensus 8 atG~iG~~l~~~L~~~g~~V~~~~~~ 33 (338)
T PRK10675 8 GSGYIGSHTCVQLLQNGHDVVILDNL 33 (338)
T ss_pred CCChHHHHHHHHHHHCCCeEEEEecC
Confidence 57999999999999999999988654
No 194
>PRK07201 short chain dehydrogenase; Provisional
Probab=74.81 E-value=8.5 Score=41.67 Aligned_cols=26 Identities=19% Similarity=0.264 Sum_probs=23.6
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|+.|+++|+.|+.+.|.
T Consensus 379 as~giG~~la~~l~~~G~~V~~~~r~ 404 (657)
T PRK07201 379 ASSGIGRATAIKVAEAGATVFLVARN 404 (657)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 46789999999999999999999875
No 195
>PRK09291 short chain dehydrogenase; Provisional
Probab=74.80 E-value=15 Score=34.20 Aligned_cols=26 Identities=12% Similarity=0.074 Sum_probs=23.4
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++++.|+++|+.|+.+.|.
T Consensus 10 asg~iG~~ia~~l~~~G~~v~~~~r~ 35 (257)
T PRK09291 10 AGSGFGREVALRLARKGHNVIAGVQI 35 (257)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57889999999999999999988774
No 196
>KOG1014|consensus
Probab=74.71 E-value=8.6 Score=38.65 Aligned_cols=114 Identities=14% Similarity=0.194 Sum_probs=63.3
Q ss_pred cCCCChhHHHHHHHHHHCCCEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHHHhhhhcccCCCCceEEEe
Q psy14323 158 NFSAGTRGASSVEYFVEQGYAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMVSTCV 237 (400)
Q Consensus 158 NfSSG~~GaaiAe~fl~~G~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (400)
+=+|...|.+.|++|++||..|.+|.|...-.. . .++..++-+...-....+.+
T Consensus 55 TGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~-----~---------------------v~kEI~~~~~vev~~i~~Df 108 (312)
T KOG1014|consen 55 TGATDGIGKAYARELAKRGFNVVLISRTQEKLE-----A---------------------VAKEIEEKYKVEVRIIAIDF 108 (312)
T ss_pred ECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHH-----H---------------------HHHHHHHHhCcEEEEEEEec
Confidence 346778899999999999999999999643210 0 01111111111111122333
Q ss_pred ecHHHHHHHHHHHHHHHHHhhcCCCcceeeeecccCCccCCCC--CCCCCCccCCCCCCeEEeeeCcchhhhc
Q psy14323 238 ESAVHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPAD--QMPEHKMQSGDGPPVISLQLVPKMLSPL 308 (400)
Q Consensus 238 ~s~~~l~dyl~lL~~~~~~l~~~~~~di~i~AAAVSDF~vp~~--~~~~~KI~S~~~~l~L~L~~~PKiL~~l 308 (400)
..-++ +|-.+++.+. ..+..++|.++..|=.+ |.. +.+++.+ .+-+++++.++.++-+.+
T Consensus 109 t~~~~--~ye~i~~~l~-----~~~VgILVNNvG~~~~~-P~~f~~~~~~~~---~~ii~vN~~~~~~~t~~i 170 (312)
T KOG1014|consen 109 TKGDE--VYEKLLEKLA-----GLDVGILVNNVGMSYDY-PESFLKYPEGEL---QNIINVNILSVTLLTQLI 170 (312)
T ss_pred CCCch--hHHHHHHHhc-----CCceEEEEecccccCCC-cHHHHhCchhhh---hheeEEecchHHHHHHHh
Confidence 33233 2332222222 45678899999888766 653 1222222 346888888877765544
No 197
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=74.32 E-value=9.8 Score=37.99 Aligned_cols=27 Identities=19% Similarity=0.042 Sum_probs=24.1
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 159 FSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 159 fSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
=.+|..|..++++++++|++|+.+.+.
T Consensus 22 GatGfiG~~lv~~L~~~g~~V~~~d~~ 48 (348)
T PRK15181 22 GVAGFIGSGLLEELLFLNQTVIGLDNF 48 (348)
T ss_pred CCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 368999999999999999999988764
No 198
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=73.33 E-value=4.6 Score=38.43 Aligned_cols=29 Identities=17% Similarity=0.181 Sum_probs=25.2
Q ss_pred cCCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 158 NFSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 158 NfSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
=.-+|.+|.++|..|...||+|++-.+..
T Consensus 6 i~GtGniG~alA~~~a~ag~eV~igs~r~ 34 (211)
T COG2085 6 IIGTGNIGSALALRLAKAGHEVIIGSSRG 34 (211)
T ss_pred EeccChHHHHHHHHHHhCCCeEEEecCCC
Confidence 34689999999999999999999986653
No 199
>PRK07102 short chain dehydrogenase; Provisional
Probab=73.29 E-value=12 Score=34.79 Aligned_cols=26 Identities=4% Similarity=0.128 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|+.|+++|+.|+.+.+.
T Consensus 9 as~giG~~~a~~l~~~G~~Vi~~~r~ 34 (243)
T PRK07102 9 ATSDIARACARRYAAAGARLYLAARD 34 (243)
T ss_pred CCcHHHHHHHHHHHhcCCEEEEEeCC
Confidence 57889999999999999999999875
No 200
>PRK12367 short chain dehydrogenase; Provisional
Probab=73.07 E-value=13 Score=35.39 Aligned_cols=27 Identities=19% Similarity=0.235 Sum_probs=23.5
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 159 FSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 159 fSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
=.||..|.++|+.|+++|+.|+.+.+.
T Consensus 21 Gas~gIG~ala~~l~~~G~~Vi~~~r~ 47 (245)
T PRK12367 21 GASGALGKALTKAFRAKGAKVIGLTHS 47 (245)
T ss_pred cCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 356789999999999999999998775
No 201
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=73.06 E-value=4.7 Score=39.41 Aligned_cols=25 Identities=12% Similarity=0.127 Sum_probs=21.2
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.+++++|+++| +|+.+.+.
T Consensus 8 ~~GfiGs~l~~~L~~~g-~V~~~~~~ 32 (299)
T PRK09987 8 KTGQVGWELQRALAPLG-NLIALDVH 32 (299)
T ss_pred CCCHHHHHHHHHhhccC-CEEEeccc
Confidence 68999999999999999 68766553
No 202
>PRK08703 short chain dehydrogenase; Provisional
Probab=72.87 E-value=32 Score=31.74 Aligned_cols=28 Identities=14% Similarity=0.170 Sum_probs=24.8
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 159 FSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 159 fSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
=.+|..|.++|+.|+++|+.|+.+.|..
T Consensus 13 G~sggiG~~la~~l~~~g~~V~~~~r~~ 40 (239)
T PRK08703 13 GASQGLGEQVAKAYAAAGATVILVARHQ 40 (239)
T ss_pred CCCCcHHHHHHHHHHHcCCEEEEEeCCh
Confidence 3688999999999999999999988753
No 203
>PRK06125 short chain dehydrogenase; Provisional
Probab=72.68 E-value=15 Score=34.58 Aligned_cols=32 Identities=19% Similarity=0.302 Sum_probs=26.0
Q ss_pred eeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 153 VRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 153 VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+=.|+- .+|-.|.++|+.|+++|+.|+++.+.
T Consensus 9 ~vlItG-~~~giG~~ia~~l~~~G~~V~~~~r~ 40 (259)
T PRK06125 9 RVLITG-ASKGIGAAAAEAFAAEGCHLHLVARD 40 (259)
T ss_pred EEEEeC-CCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 344555 45669999999999999999999875
No 204
>PRK07023 short chain dehydrogenase; Provisional
Probab=72.64 E-value=20 Score=33.27 Aligned_cols=26 Identities=31% Similarity=0.321 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|++|+++|+.|+.+.|+
T Consensus 9 asggiG~~ia~~l~~~G~~v~~~~r~ 34 (243)
T PRK07023 9 HSRGLGAALAEQLLQPGIAVLGVARS 34 (243)
T ss_pred CCcchHHHHHHHHHhCCCEEEEEecC
Confidence 57899999999999999999998875
No 205
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=72.62 E-value=32 Score=33.21 Aligned_cols=34 Identities=15% Similarity=0.185 Sum_probs=27.7
Q ss_pred ceeEEecCC-CChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 152 TVRFVDNFS-AGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 152 ~VRfIdNfS-SG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+=.||--| ++-.|.++|+.|++.|+.|++..+.
T Consensus 6 k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~ 40 (274)
T PRK08415 6 KKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLN 40 (274)
T ss_pred cEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecC
Confidence 344677776 3679999999999999999987764
No 206
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=72.54 E-value=14 Score=36.47 Aligned_cols=30 Identities=13% Similarity=0.273 Sum_probs=24.3
Q ss_pred EEecCCCChhHHHHHHHHHHCC-CEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQG-YAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G-~~Vifl~~~ 185 (400)
+||--| +-.|.++|+.|+++| +.|+++.|.
T Consensus 7 lITGas-~GIG~aia~~L~~~G~~~V~l~~r~ 37 (314)
T TIGR01289 7 IITGAS-SGLGLYAAKALAATGEWHVIMACRD 37 (314)
T ss_pred EEECCC-ChHHHHHHHHHHHcCCCEEEEEeCC
Confidence 455544 567999999999999 999998775
No 207
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=72.45 E-value=17 Score=34.86 Aligned_cols=35 Identities=11% Similarity=0.168 Sum_probs=28.2
Q ss_pred CceeEEecCCC-ChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 151 NTVRFVDNFSA-GTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 151 d~VRfIdNfSS-G~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+.+=.||=-|+ +-.|.++|+.|++.||.|++.++.
T Consensus 7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~ 42 (271)
T PRK06505 7 GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQG 42 (271)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCc
Confidence 34556777776 378999999999999999988764
No 208
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=72.45 E-value=11 Score=37.40 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=26.2
Q ss_pred eEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 154 RFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 154 RfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
|.+=-=.+|.-|..++++|+++||.|+.+.+.
T Consensus 12 ~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~ 43 (353)
T PLN02896 12 TYCVTGATGYIGSWLVKLLLQRGYTVHATLRD 43 (353)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34434468999999999999999999988764
No 209
>PRK05855 short chain dehydrogenase; Validated
Probab=72.14 E-value=11 Score=39.49 Aligned_cols=26 Identities=15% Similarity=0.158 Sum_probs=23.6
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||-.|.++|+.+.++|+.|+++.|+
T Consensus 323 ~s~giG~~~a~~l~~~G~~v~~~~r~ 348 (582)
T PRK05855 323 AGSGIGRETALAFAREGAEVVASDID 348 (582)
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47889999999999999999998875
No 210
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=71.79 E-value=6.1 Score=30.74 Aligned_cols=31 Identities=26% Similarity=0.401 Sum_probs=27.3
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCCCCC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNSIRP 43 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~~~p 43 (400)
-+|.-|..+|.+|...|..|++++|...+.|
T Consensus 6 GgG~ig~E~A~~l~~~g~~vtli~~~~~~~~ 36 (80)
T PF00070_consen 6 GGGFIGIELAEALAELGKEVTLIERSDRLLP 36 (80)
T ss_dssp SSSHHHHHHHHHHHHTTSEEEEEESSSSSST
T ss_pred CcCHHHHHHHHHHHHhCcEEEEEeccchhhh
Confidence 3688999999999999999999999976554
No 211
>PRK08862 short chain dehydrogenase; Provisional
Probab=71.68 E-value=25 Score=32.92 Aligned_cols=30 Identities=10% Similarity=0.195 Sum_probs=24.5
Q ss_pred EEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|+--|+ ..|.++|+.|.++|+.|++++|.
T Consensus 9 lVtGas~-GIG~aia~~la~~G~~V~~~~r~ 38 (227)
T PRK08862 9 LITSAGS-VLGRTISCHFARLGATLILCDQD 38 (227)
T ss_pred EEECCcc-HHHHHHHHHHHHCCCEEEEEcCC
Confidence 4555555 45999999999999999998875
No 212
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=71.53 E-value=32 Score=31.37 Aligned_cols=27 Identities=19% Similarity=0.253 Sum_probs=24.1
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 159 FSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 159 fSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
-.+|..|.++++.|...|+.|+++.|.
T Consensus 35 GgtG~iG~~~a~~l~~~g~~V~l~~R~ 61 (194)
T cd01078 35 GGTGPVGQRAAVLLAREGARVVLVGRD 61 (194)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 357999999999999999999998775
No 213
>PRK05599 hypothetical protein; Provisional
Probab=71.43 E-value=21 Score=33.55 Aligned_cols=24 Identities=8% Similarity=0.134 Sum_probs=20.5
Q ss_pred CChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 161 AGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 161 SG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
|+-.|.++|+.|. .|+.|+++.|.
T Consensus 9 s~GIG~aia~~l~-~g~~Vil~~r~ 32 (246)
T PRK05599 9 TSDIAGEIATLLC-HGEDVVLAARR 32 (246)
T ss_pred ccHHHHHHHHHHh-CCCEEEEEeCC
Confidence 4567999999998 59999998775
No 214
>PRK12742 oxidoreductase; Provisional
Probab=71.23 E-value=19 Score=33.16 Aligned_cols=27 Identities=33% Similarity=0.413 Sum_probs=23.1
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 159 FSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 159 fSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
=.+|..|.++|+.|.++|+.|+++.+.
T Consensus 13 GasggIG~~~a~~l~~~G~~v~~~~~~ 39 (237)
T PRK12742 13 GGSRGIGAAIVRRFVTDGANVRFTYAG 39 (237)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 357889999999999999999887653
No 215
>PRK07578 short chain dehydrogenase; Provisional
Probab=70.95 E-value=14 Score=33.22 Aligned_cols=25 Identities=20% Similarity=0.250 Sum_probs=22.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|.++ +.|+.+.|+
T Consensus 8 as~giG~~la~~l~~~-~~vi~~~r~ 32 (199)
T PRK07578 8 ASGTIGRAVVAELSKR-HEVITAGRS 32 (199)
T ss_pred CCcHHHHHHHHHHHhc-CcEEEEecC
Confidence 5788999999999999 999988764
No 216
>PRK06720 hypothetical protein; Provisional
Probab=70.84 E-value=18 Score=32.72 Aligned_cols=26 Identities=15% Similarity=0.134 Sum_probs=22.4
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|-.|.++|..|.+.|+.|+++.+.
T Consensus 24 a~~GIG~aia~~l~~~G~~V~l~~r~ 49 (169)
T PRK06720 24 GGIGIGRNTALLLAKQGAKVIVTDID 49 (169)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEECC
Confidence 35678999999999999999988764
No 217
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=70.78 E-value=4.4 Score=35.99 Aligned_cols=31 Identities=19% Similarity=0.249 Sum_probs=27.2
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCCCCC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNSIRP 43 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~~~p 43 (400)
.||..|..++++++++|+.|+.+.|+.+..+
T Consensus 6 atG~vG~~l~~~L~~~~~~V~~~~R~~~~~~ 36 (183)
T PF13460_consen 6 ATGFVGRALAKQLLRRGHEVTALVRSPSKAE 36 (183)
T ss_dssp TTSHHHHHHHHHHHHTTSEEEEEESSGGGHH
T ss_pred CCChHHHHHHHHHHHCCCEEEEEecCchhcc
Confidence 4799999999999999999999999866433
No 218
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=70.69 E-value=3.8 Score=38.36 Aligned_cols=28 Identities=25% Similarity=0.362 Sum_probs=25.3
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
+|+-.|.++|+.|+++|+.|++.+|..+
T Consensus 4 ~s~GiG~aia~~l~~~Ga~V~~~~~~~~ 31 (241)
T PF13561_consen 4 SSSGIGRAIARALAEEGANVILTDRNEE 31 (241)
T ss_dssp STSHHHHHHHHHHHHTTEEEEEEESSHH
T ss_pred CCCChHHHHHHHHHHCCCEEEEEeCChH
Confidence 4678899999999999999999999854
No 219
>PRK06940 short chain dehydrogenase; Provisional
Probab=70.17 E-value=19 Score=34.58 Aligned_cols=30 Identities=23% Similarity=0.181 Sum_probs=23.8
Q ss_pred eeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 153 VRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 153 VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+=.||- + |-.|.++|+.|. +|+.|+++.+.
T Consensus 4 ~~lItG-a-~gIG~~la~~l~-~G~~Vv~~~r~ 33 (275)
T PRK06940 4 VVVVIG-A-GGIGQAIARRVG-AGKKVLLADYN 33 (275)
T ss_pred EEEEEC-C-ChHHHHHHHHHh-CCCEEEEEeCC
Confidence 345676 3 469999999996 89999998874
No 220
>PRK07904 short chain dehydrogenase; Provisional
Probab=70.07 E-value=29 Score=32.87 Aligned_cols=32 Identities=9% Similarity=0.027 Sum_probs=25.4
Q ss_pred EEecCCCChhHHHHHHHHHHCC-CEEEEEeccC
Q psy14323 155 FVDNFSAGTRGASSVEYFVEQG-YAVLFVYSTC 186 (400)
Q Consensus 155 fIdNfSSG~~GaaiAe~fl~~G-~~Vifl~~~~ 186 (400)
.+=-=.||..|.++|++|+++| +.|+++.|..
T Consensus 11 vlItGas~giG~~la~~l~~~gg~~V~~~~r~~ 43 (253)
T PRK07904 11 ILLLGGTSEIGLAICERYLKNAPARVVLAALPD 43 (253)
T ss_pred EEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCc
Confidence 3333457899999999999995 9999887754
No 221
>PLN02214 cinnamoyl-CoA reductase
Probab=69.34 E-value=18 Score=36.08 Aligned_cols=72 Identities=11% Similarity=0.077 Sum_probs=0.0
Q ss_pred CChhHHHHHHHHHHCCCEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHHHhhhhcccCCCCceEE--Eee
Q psy14323 161 AGTRGASSVEYFVEQGYAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMVST--CVE 238 (400)
Q Consensus 161 SG~~GaaiAe~fl~~G~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 238 (400)
+|..|.++++.++++||.|+.+.|.... ...............+..+ .+.
T Consensus 19 tGfIG~~l~~~L~~~G~~V~~~~r~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~Dl~ 70 (342)
T PLN02214 19 GGYIASWIVKILLERGYTVKGTVRNPDD----------------------------PKNTHLRELEGGKERLILCKADLQ 70 (342)
T ss_pred CcHHHHHHHHHHHHCcCEEEEEeCCchh----------------------------hhHHHHHHhhCCCCcEEEEecCcC
Q ss_pred cHHHHHHHHHHHHHHHHHhhcCCCcceeeeecccC
Q psy14323 239 SAVHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVA 273 (400)
Q Consensus 239 s~~~l~dyl~lL~~~~~~l~~~~~~di~i~AAAVS 273 (400)
...++.+.+ ...|++||+|+..
T Consensus 71 d~~~~~~~~-------------~~~d~Vih~A~~~ 92 (342)
T PLN02214 71 DYEALKAAI-------------DGCDGVFHTASPV 92 (342)
T ss_pred ChHHHHHHH-------------hcCCEEEEecCCC
No 222
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=69.14 E-value=4.5 Score=38.04 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=29.0
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCCCCC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNSIRP 43 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~~~p 43 (400)
-||+-|+.++++.++||.+|+-|-|..++.|
T Consensus 8 AsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~ 38 (211)
T COG2910 8 ASGKAGSRILKEALKRGHEVTAIVRNASKLA 38 (211)
T ss_pred cCchhHHHHHHHHHhCCCeeEEEEeChHhcc
Confidence 3899999999999999999999999988777
No 223
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=69.09 E-value=15 Score=36.34 Aligned_cols=26 Identities=12% Similarity=0.222 Sum_probs=22.6
Q ss_pred CCChhHHHHHHHHHHCC--CEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQG--YAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G--~~Vifl~~~ 185 (400)
.+|..|.++++.|+++| +.|+.+.+.
T Consensus 12 atG~IG~~l~~~L~~~g~~~~V~~~~r~ 39 (324)
T TIGR03589 12 GTGSFGKAFISRLLENYNPKKIIIYSRD 39 (324)
T ss_pred CCCHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 57999999999999997 789888764
No 224
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=68.87 E-value=5.4 Score=37.50 Aligned_cols=27 Identities=15% Similarity=0.292 Sum_probs=25.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.||+-|..|+++++.||++|+-+-|+.
T Consensus 8 AsG~~Gs~i~~EA~~RGHeVTAivRn~ 34 (211)
T COG2910 8 ASGKAGSRILKEALKRGHEVTAIVRNA 34 (211)
T ss_pred cCchhHHHHHHHHHhCCCeeEEEEeCh
Confidence 589999999999999999999999864
No 225
>PLN00198 anthocyanidin reductase; Provisional
Probab=68.45 E-value=16 Score=36.10 Aligned_cols=28 Identities=18% Similarity=0.208 Sum_probs=24.1
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 159 FSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 159 fSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
=.+|.-|..++++++++||+|+.+.+..
T Consensus 16 G~~GfIG~~l~~~L~~~g~~V~~~~r~~ 43 (338)
T PLN00198 16 GGTGFLASLLIKLLLQKGYAVNTTVRDP 43 (338)
T ss_pred CCchHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3569999999999999999998877653
No 226
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=68.11 E-value=30 Score=35.75 Aligned_cols=26 Identities=23% Similarity=0.250 Sum_probs=23.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|-.|.++|+.|.++|+.|+.+.++
T Consensus 218 asggIG~~la~~l~~~Ga~vi~~~~~ 243 (450)
T PRK08261 218 AARGIGAAIAEVLARDGAHVVCLDVP 243 (450)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999999999998764
No 227
>KOG1014|consensus
Probab=67.02 E-value=10 Score=38.07 Aligned_cols=65 Identities=17% Similarity=0.349 Sum_probs=46.8
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCCCCCccccCCCcccccccccCCCCCCceecCCCcccchHHHHHHHHhhhhcCc
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNSIRPYIRHFSGATFLDCLQVSADNPDTISVKPEVVPKLRPILDRYARVKRDSL 92 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~~~pf~r~~~~~~~ld~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~ 92 (400)
.|+.-|-+.|++|+++|++|.+|+|.-+ ..+++.+.+.+=+++. -+
T Consensus 57 aTDGIGKayA~eLAkrG~nvvLIsRt~~--------------------------------KL~~v~kEI~~~~~ve--v~ 102 (312)
T KOG1014|consen 57 ATDGIGKAYARELAKRGFNVVLISRTQE--------------------------------KLEAVAKEIEEKYKVE--VR 102 (312)
T ss_pred CCCcchHHHHHHHHHcCCEEEEEeCCHH--------------------------------HHHHHHHHHHHHhCcE--EE
Confidence 4667799999999999999999999722 1224555555443443 78
Q ss_pred eEEEeccCHHH-HHHHHHHH
Q psy14323 93 LLSVEFTTLAE-YLWLLRTV 111 (400)
Q Consensus 93 Ll~i~f~Tv~e-Yl~~L~~i 111 (400)
.+.+.|+.-.+ |...+..+
T Consensus 103 ~i~~Dft~~~~~ye~i~~~l 122 (312)
T KOG1014|consen 103 IIAIDFTKGDEVYEKLLEKL 122 (312)
T ss_pred EEEEecCCCchhHHHHHHHh
Confidence 99999987765 76666554
No 228
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=66.13 E-value=6.5 Score=35.99 Aligned_cols=25 Identities=32% Similarity=0.503 Sum_probs=22.1
Q ss_pred CChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 161 AGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 161 SG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+|+||..+|-.|+..|+.|+++-.+
T Consensus 7 aG~mG~~iA~~~a~~G~~V~l~d~~ 31 (180)
T PF02737_consen 7 AGTMGRGIAALFARAGYEVTLYDRS 31 (180)
T ss_dssp -SHHHHHHHHHHHHTTSEEEEE-SS
T ss_pred CCHHHHHHHHHHHhCCCcEEEEECC
Confidence 6999999999999999999999875
No 229
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=65.92 E-value=15 Score=37.61 Aligned_cols=35 Identities=26% Similarity=0.237 Sum_probs=28.6
Q ss_pred ceeEEecCCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 152 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 152 ~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
..+.+=-=.||..|..++++++++||+|+.+.|+.
T Consensus 60 ~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~ 94 (390)
T PLN02657 60 DVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREK 94 (390)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEech
Confidence 33444445789999999999999999999998853
No 230
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=64.99 E-value=11 Score=37.88 Aligned_cols=27 Identities=15% Similarity=0.175 Sum_probs=24.2
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
-||.||.-+|..++++||.|+..|+..
T Consensus 167 ~s~ivG~PmA~~L~~~gatVtv~~~~t 193 (301)
T PRK14194 167 RSNIVGKPMAALLLQAHCSVTVVHSRS 193 (301)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCC
Confidence 467999999999999999999999753
No 231
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=64.90 E-value=31 Score=29.25 Aligned_cols=26 Identities=15% Similarity=0.363 Sum_probs=21.3
Q ss_pred CCChhHHHHHHHHHHCCC-EEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGY-AVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~-~Vifl~~~ 185 (400)
.+|..|.+++++++++|+ .|+++.++
T Consensus 8 a~~~iG~~~~~~l~~~g~~~v~~~~r~ 34 (180)
T smart00822 8 GLGGLGLELARWLAERGARHLVLLSRS 34 (180)
T ss_pred CCChHHHHHHHHHHHhhCCeEEEEeCC
Confidence 578899999999999998 46666654
No 232
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=64.86 E-value=22 Score=37.06 Aligned_cols=26 Identities=27% Similarity=0.369 Sum_probs=23.4
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|+.+.++|+.|+.+.+.
T Consensus 186 ASgGIG~aLA~~La~~G~~Vi~l~r~ 211 (406)
T PRK07424 186 ASGTLGQALLKELHQQGAKVVALTSN 211 (406)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 56889999999999999999998775
No 233
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=64.54 E-value=6.5 Score=37.40 Aligned_cols=31 Identities=13% Similarity=0.205 Sum_probs=26.7
Q ss_pred eecCCcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 9 VDNFSAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 9 i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
+.=+-+|.+|.++|+.|.+.|++|++-.|++
T Consensus 4 ~~i~GtGniG~alA~~~a~ag~eV~igs~r~ 34 (211)
T COG2085 4 IAIIGTGNIGSALALRLAKAGHEVIIGSSRG 34 (211)
T ss_pred EEEeccChHHHHHHHHHHhCCCeEEEecCCC
Confidence 3345689999999999999999999997773
No 234
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=64.32 E-value=13 Score=34.44 Aligned_cols=27 Identities=22% Similarity=0.396 Sum_probs=25.5
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.||..|..+++.++..|+.|..+.|+.
T Consensus 6 atG~~G~~v~~~L~~~~~~V~~l~R~~ 32 (233)
T PF05368_consen 6 ATGNQGRSVVRALLSAGFSVRALVRDP 32 (233)
T ss_dssp TTSHHHHHHHHHHHHTTGCEEEEESSS
T ss_pred CccHHHHHHHHHHHhCCCCcEEEEecc
Confidence 489999999999999999999999976
No 235
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=64.15 E-value=6.7 Score=38.61 Aligned_cols=32 Identities=25% Similarity=0.518 Sum_probs=26.5
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
.|+--|+| -|.++|+.|.++||.|+++.|+.+
T Consensus 10 lITGASsG-IG~~~A~~lA~~g~~liLvaR~~~ 41 (265)
T COG0300 10 LITGASSG-IGAELAKQLARRGYNLILVARRED 41 (265)
T ss_pred EEECCCch-HHHHHHHHHHHCCCEEEEEeCcHH
Confidence 35555666 599999999999999999999843
No 236
>PLN02240 UDP-glucose 4-epimerase
Probab=63.91 E-value=32 Score=33.82 Aligned_cols=82 Identities=13% Similarity=0.042 Sum_probs=0.0
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHHHhhhhcccCCCCceEEEeec
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMVSTCVES 239 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 239 (400)
.+|..|.++++.++++|++|+.+.+.... .........................+..
T Consensus 13 atG~iG~~l~~~L~~~g~~V~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 69 (352)
T PLN02240 13 GAGYIGSHTVLQLLLAGYKVVVIDNLDNS-----------------------SEEALRRVKELAGDLGDNLVFHKVDLRD 69 (352)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCCCcc-----------------------hHHHHHHHHHhhcccCccceEEecCcCC
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcceeeeecccCCc
Q psy14323 240 AVHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADF 275 (400)
Q Consensus 240 ~~~l~dyl~lL~~~~~~l~~~~~~di~i~AAAVSDF 275 (400)
..++.+.+ .....|.+||+||....
T Consensus 70 ~~~l~~~~-----------~~~~~d~vih~a~~~~~ 94 (352)
T PLN02240 70 KEALEKVF-----------ASTRFDAVIHFAGLKAV 94 (352)
T ss_pred HHHHHHHH-----------HhCCCCEEEEccccCCc
No 237
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=63.87 E-value=11 Score=37.45 Aligned_cols=25 Identities=12% Similarity=0.158 Sum_probs=22.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
++|..|.++++.+. .+++|+.+.++
T Consensus 8 ~~GqLG~~L~~~l~-~~~~v~a~~~~ 32 (281)
T COG1091 8 ANGQLGTELRRALP-GEFEVIATDRA 32 (281)
T ss_pred CCChHHHHHHHHhC-CCceEEeccCc
Confidence 68999999999999 88999998765
No 238
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=63.50 E-value=9.9 Score=36.63 Aligned_cols=25 Identities=32% Similarity=0.417 Sum_probs=21.2
Q ss_pred CChhHHHHHHHHHHCCC-EEEEEecc
Q psy14323 161 AGTRGASSVEYFVEQGY-AVLFVYST 185 (400)
Q Consensus 161 SG~~GaaiAe~fl~~G~-~Vifl~~~ 185 (400)
+|..|..+++.|.++|+ .|+.+.+.
T Consensus 7 tG~iG~~l~~~L~~~g~~~v~~~~~~ 32 (314)
T TIGR02197 7 AGFIGSNLVKALNERGITDILVVDNL 32 (314)
T ss_pred cchhhHHHHHHHHHcCCceEEEEecC
Confidence 68899999999999998 67766543
No 239
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=63.42 E-value=15 Score=36.37 Aligned_cols=73 Identities=16% Similarity=0.146 Sum_probs=0.0
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHHHhhhhcccCCCC----ceEE
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQ----MVST 235 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 235 (400)
.||..|.++++.++++|++|+.+.+.... ............. ....
T Consensus 9 atGfIG~~l~~~L~~~g~~~v~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~ 58 (355)
T PRK10217 9 GAGFIGSALVRYIINETSDAVVVVDKLTY------------------------------AGNLMSLAPVAQSERFAFEKV 58 (355)
T ss_pred CCcHHHHHHHHHHHHcCCCEEEEEecCcc------------------------------ccchhhhhhcccCCceEEEEC
Q ss_pred EeecHHHHHHHHHHHHHHHHHhhcCC-CcceeeeecccCC
Q psy14323 236 CVESAVHLAEYLWLLRTVCESLQDGG-NRVLLYLAAAVAD 274 (400)
Q Consensus 236 ~~~s~~~l~dyl~lL~~~~~~l~~~~-~~di~i~AAAVSD 274 (400)
.+.+.+.+.+.+ .+ ..|.+||+||..+
T Consensus 59 Dl~d~~~~~~~~------------~~~~~D~Vih~A~~~~ 86 (355)
T PRK10217 59 DICDRAELARVF------------TEHQPDCVMHLAAESH 86 (355)
T ss_pred CCcChHHHHHHH------------hhcCCCEEEECCcccC
No 240
>PLN02427 UDP-apiose/xylose synthase
Probab=62.99 E-value=18 Score=36.55 Aligned_cols=32 Identities=16% Similarity=0.028 Sum_probs=25.8
Q ss_pred eEEecCCCChhHHHHHHHHHHC-CCEEEEEecc
Q psy14323 154 RFVDNFSAGTRGASSVEYFVEQ-GYAVLFVYST 185 (400)
Q Consensus 154 RfIdNfSSG~~GaaiAe~fl~~-G~~Vifl~~~ 185 (400)
|.+=-=.+|..|..+++.++++ |++|+.+.+.
T Consensus 16 ~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~ 48 (386)
T PLN02427 16 TICMIGAGGFIGSHLCEKLMTETPHKVLALDVY 48 (386)
T ss_pred EEEEECCcchHHHHHHHHHHhcCCCEEEEEecC
Confidence 3444447899999999999999 5999988764
No 241
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=62.82 E-value=6.8 Score=35.86 Aligned_cols=26 Identities=35% Similarity=0.544 Sum_probs=22.0
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
-+|.||..+|-.|+.+|+.|++.-+.
T Consensus 6 GaG~mG~~iA~~~a~~G~~V~l~d~~ 31 (180)
T PF02737_consen 6 GAGTMGRGIAALFARAGYEVTLYDRS 31 (180)
T ss_dssp S-SHHHHHHHHHHHHTTSEEEEE-SS
T ss_pred cCCHHHHHHHHHHHhCCCcEEEEECC
Confidence 47999999999999999999996654
No 242
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=62.73 E-value=11 Score=36.75 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=30.6
Q ss_pred ceeeeecCCcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 5 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 5 ~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
.|=+|+--|||. |.++|+.|.+.||.|++.-|+..
T Consensus 7 kv~lITGASSGi-G~A~A~~l~~~G~~vvl~aRR~d 41 (246)
T COG4221 7 KVALITGASSGI-GEATARALAEAGAKVVLAARREE 41 (246)
T ss_pred cEEEEecCcchH-HHHHHHHHHHCCCeEEEEeccHH
Confidence 466888889985 99999999999999999999843
No 243
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=61.99 E-value=16 Score=34.67 Aligned_cols=27 Identities=15% Similarity=0.215 Sum_probs=22.9
Q ss_pred CCChhHHHHHHHHHHCCC--EEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGY--AVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~--~Vifl~~~~ 186 (400)
+||..|..+.+.+++.+. .|.++-|..
T Consensus 4 aTGflG~~ll~~Ll~~~~~~~I~cLvR~~ 32 (249)
T PF07993_consen 4 ATGFLGSHLLEELLRQPPDVKIYCLVRAS 32 (249)
T ss_dssp TTSHHHHHHHHHHHHHS-TTEEEEEE-SS
T ss_pred CCcHHHHHHHHHHHcCCCCcEEEEEEeCc
Confidence 689999999999999998 899998865
No 244
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=61.25 E-value=8.8 Score=35.53 Aligned_cols=27 Identities=22% Similarity=0.341 Sum_probs=24.5
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.||..|.++|+.|+++|+.|+.+.|..
T Consensus 13 asg~iG~~l~~~l~~~G~~V~~~~r~~ 39 (251)
T PRK07231 13 ASSGIGEGIARRFAAEGARVVVTDRNE 39 (251)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 468899999999999999999999874
No 245
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=61.14 E-value=26 Score=34.66 Aligned_cols=26 Identities=15% Similarity=0.115 Sum_probs=22.8
Q ss_pred CCChhHHHHHHHHHHC-CCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQ-GYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~-G~~Vifl~~~ 185 (400)
.+|..|..++++++++ ||+|+.+.+.
T Consensus 9 atGfiGs~l~~~L~~~~~~~V~~~~r~ 35 (347)
T PRK11908 9 VNGFIGHHLSKRILETTDWEVYGMDMQ 35 (347)
T ss_pred CCcHHHHHHHHHHHhCCCCeEEEEeCc
Confidence 5799999999999987 7999988764
No 246
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=60.98 E-value=25 Score=33.65 Aligned_cols=63 Identities=19% Similarity=0.062 Sum_probs=0.0
Q ss_pred CChhHHHHHHHHHHCCCEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHHHhhhhcccCCC----CceEEE
Q psy14323 161 AGTRGASSVEYFVEQGYAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPAD----QMVSTC 236 (400)
Q Consensus 161 SG~~GaaiAe~fl~~G~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 236 (400)
||.-|..+++.+.++||+|..+.+.... .... ......
T Consensus 9 tGfiG~~l~~~L~~~g~~V~~~~r~~~~--------------------------------------~~~~~~~~~~~~~d 50 (314)
T COG0451 9 AGFIGSHLVERLLAAGHDVRGLDRLRDG--------------------------------------LDPLLSGVEFVVLD 50 (314)
T ss_pred cccHHHHHHHHHHhCCCeEEEEeCCCcc--------------------------------------ccccccccceeeec
Q ss_pred eecHHHHHHHHHHHHHHHHHhhcCCCcceeeeecccC
Q psy14323 237 VESAVHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVA 273 (400)
Q Consensus 237 ~~s~~~l~dyl~lL~~~~~~l~~~~~~di~i~AAAVS 273 (400)
......+.+.. ....|++||+||.+
T Consensus 51 ~~~~~~~~~~~------------~~~~d~vih~aa~~ 75 (314)
T COG0451 51 LTDRDLVDELA------------KGVPDAVIHLAAQS 75 (314)
T ss_pred ccchHHHHHHH------------hcCCCEEEEccccC
No 247
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=60.93 E-value=18 Score=39.68 Aligned_cols=27 Identities=19% Similarity=0.177 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHHC-CCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQ-GYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~-G~~Vifl~~~~ 186 (400)
.+|-.|..++++++++ ||+|+.+.+..
T Consensus 323 atGFIGs~Lv~~Ll~~~g~~V~~l~r~~ 350 (660)
T PRK08125 323 VNGFIGNHLTERLLRDDNYEVYGLDIGS 350 (660)
T ss_pred CCchHHHHHHHHHHhCCCcEEEEEeCCc
Confidence 5899999999999986 79999998753
No 248
>PRK06924 short chain dehydrogenase; Provisional
Probab=60.81 E-value=8.9 Score=35.73 Aligned_cols=27 Identities=19% Similarity=0.335 Sum_probs=24.4
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.||.-|.++|++|+++||.|+.+.|..
T Consensus 9 asggiG~~ia~~l~~~g~~V~~~~r~~ 35 (251)
T PRK06924 9 TSQGLGEAIANQLLEKGTHVISISRTE 35 (251)
T ss_pred CCchHHHHHHHHHHhcCCEEEEEeCCc
Confidence 578899999999999999999998864
No 249
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=60.37 E-value=8.7 Score=36.22 Aligned_cols=26 Identities=23% Similarity=0.295 Sum_probs=23.3
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+||..|.++|+.|+++||.|+++.|.
T Consensus 8 as~gIG~aia~~l~~~G~~V~~~~r~ 33 (259)
T PRK08340 8 SSRGIGFNVARELLKKGARVVISSRN 33 (259)
T ss_pred CCcHHHHHHHHHHHHcCCEEEEEeCC
Confidence 46778999999999999999998875
No 250
>PRK07831 short chain dehydrogenase; Provisional
Probab=60.19 E-value=59 Score=30.50 Aligned_cols=34 Identities=18% Similarity=0.190 Sum_probs=25.4
Q ss_pred ceeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 152 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 152 ~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
..=.|+--|++-.|.++|+.|+++|+.|+++.+.
T Consensus 18 k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~ 51 (262)
T PRK07831 18 KVVLVTAAAGTGIGSATARRALEEGARVVISDIH 51 (262)
T ss_pred CEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCC
Confidence 3445655443368999999999999999887654
No 251
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=59.99 E-value=11 Score=30.12 Aligned_cols=26 Identities=27% Similarity=0.438 Sum_probs=23.3
Q ss_pred CcccchHHHHHHHHHCC---CeEEEE-eec
Q psy14323 13 SAGTRGASSVEYFVEQG---YAVLFV-YRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g---~~v~~~-~~~ 38 (400)
-+|.||.++++.|+..| ..|++. +|.
T Consensus 6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~ 35 (96)
T PF03807_consen 6 GAGNMGSALARGLLASGIKPHEVIIVSSRS 35 (96)
T ss_dssp STSHHHHHHHHHHHHTTS-GGEEEEEEESS
T ss_pred CCCHHHHHHHHHHHHCCCCceeEEeeccCc
Confidence 58999999999999999 999988 554
No 252
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=59.51 E-value=12 Score=37.12 Aligned_cols=26 Identities=12% Similarity=0.212 Sum_probs=23.5
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
-||.+|.-+|..++++||.|+..|..
T Consensus 166 ~S~ivG~Pla~lL~~~gatVtv~~s~ 191 (284)
T PRK14179 166 RSNIVGKPMAQLLLDKNATVTLTHSR 191 (284)
T ss_pred CCCcCcHHHHHHHHHCCCEEEEECCC
Confidence 47899999999999999999998764
No 253
>PRK05865 hypothetical protein; Provisional
Probab=59.09 E-value=26 Score=40.01 Aligned_cols=26 Identities=19% Similarity=0.266 Sum_probs=23.9
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.+++++++.+|++|+.+.+.
T Consensus 8 ATGfIGs~La~~Ll~~G~~Vv~l~R~ 33 (854)
T PRK05865 8 ASGVLGRGLTARLLSQGHEVVGIARH 33 (854)
T ss_pred CCCHHHHHHHHHHHHCcCEEEEEECC
Confidence 68999999999999999999998875
No 254
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=58.74 E-value=35 Score=37.83 Aligned_cols=32 Identities=25% Similarity=0.378 Sum_probs=26.0
Q ss_pred eeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 153 VRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 153 VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+=.||- .+|-.|.++|+.|+++|+.|+.+.++
T Consensus 416 vvLVTG-asggIG~aiA~~La~~Ga~Vvi~~r~ 447 (676)
T TIGR02632 416 VAFVTG-GAGGIGRETARRLAAEGAHVVLADLN 447 (676)
T ss_pred EEEEeC-CCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 344444 46889999999999999999998875
No 255
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=57.09 E-value=11 Score=34.68 Aligned_cols=26 Identities=19% Similarity=0.141 Sum_probs=23.8
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|++|+++||.|+.+.|.
T Consensus 14 asg~iG~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 14 AARGIGRAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred CCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 46888999999999999999999887
No 256
>PRK07814 short chain dehydrogenase; Provisional
Probab=57.05 E-value=11 Score=35.67 Aligned_cols=26 Identities=31% Similarity=0.345 Sum_probs=23.6
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|--|.++|+.|+++||.|+.+.|.
T Consensus 18 asggIG~~~a~~l~~~G~~Vi~~~r~ 43 (263)
T PRK07814 18 AGRGLGAAIALAFAEAGADVLIAART 43 (263)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999999999999886
No 257
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=56.98 E-value=47 Score=34.82 Aligned_cols=108 Identities=16% Similarity=0.211 Sum_probs=63.9
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHHHhhhhcccCCCCceEEEeec
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMVSTCVES 239 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 239 (400)
-.|.||...|.++...|...+.+..........+ +..+. ..+.+
T Consensus 185 GAGem~~lva~~L~~~g~~~i~IaNRT~erA~~L----------a~~~~--------------------------~~~~~ 228 (414)
T COG0373 185 GAGEMGELVAKHLAEKGVKKITIANRTLERAEEL----------AKKLG--------------------------AEAVA 228 (414)
T ss_pred cccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHH----------HHHhC--------------------------Ceeec
Confidence 5799999999999999976666665433211110 00000 23345
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcceeeeecccCCccCCCCCCCCCCccCCCCCCeEEeeeCcchhhhcccccCCCcEEE
Q psy14323 240 AVHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMPEHKMQSGDGPPVISLQLVPKMLSPLTSVWSPRAFVV 319 (400)
Q Consensus 240 ~~~l~dyl~lL~~~~~~l~~~~~~di~i~AAAVSDF~vp~~~~~~~KI~S~~~~l~L~L~~~PKiL~~l~~~~~P~~~iV 319 (400)
++++.+|+ ..+|++|.|-+-..|.++.. +.+.=++....-+.+.+---+++=..+.+ -|+.+++
T Consensus 229 l~el~~~l-------------~~~DvVissTsa~~~ii~~~-~ve~a~~~r~~~livDiavPRdie~~v~~--l~~v~l~ 292 (414)
T COG0373 229 LEELLEAL-------------AEADVVISSTSAPHPIITRE-MVERALKIRKRLLIVDIAVPRDVEPEVGE--LPNVFLY 292 (414)
T ss_pred HHHHHHhh-------------hhCCEEEEecCCCccccCHH-HHHHHHhcccCeEEEEecCCCCCCccccC--cCCeEEE
Confidence 66676664 57899999988888887554 22222222111256677766777666643 2555544
No 258
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=56.82 E-value=32 Score=32.86 Aligned_cols=77 Identities=14% Similarity=0.090 Sum_probs=0.0
Q ss_pred CCChhHHHHHHHHHHCC--CEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHHHhhhhcccCCCCceEEEe
Q psy14323 160 SAGTRGASSVEYFVEQG--YAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMVSTCV 237 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G--~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (400)
.||..|.++++.++++| ++|+.+.+............+.. ...-......+
T Consensus 7 atG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~Dl 59 (317)
T TIGR01181 7 GAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED---------------------------NPRYRFVKGDI 59 (317)
T ss_pred CCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc---------------------------CCCcEEEEcCC
Q ss_pred ecHHHHHHHHHHHHHHHHHhhcCCCcceeeeecccCC
Q psy14323 238 ESAVHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVAD 274 (400)
Q Consensus 238 ~s~~~l~dyl~lL~~~~~~l~~~~~~di~i~AAAVSD 274 (400)
.+..++.+.+ .....|++||+||.+.
T Consensus 60 ~~~~~~~~~~-----------~~~~~d~vi~~a~~~~ 85 (317)
T TIGR01181 60 GDRELVSRLF-----------TEHQPDAVVHFAAESH 85 (317)
T ss_pred cCHHHHHHHH-----------hhcCCCEEEEcccccC
No 259
>PRK08219 short chain dehydrogenase; Provisional
Probab=56.72 E-value=38 Score=30.69 Aligned_cols=25 Identities=12% Similarity=0.058 Sum_probs=22.6
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++++.++++ ++|+.+.|+
T Consensus 11 ~~g~iG~~l~~~l~~~-~~V~~~~r~ 35 (227)
T PRK08219 11 ASRGIGAAIARELAPT-HTLLLGGRP 35 (227)
T ss_pred CCcHHHHHHHHHHHhh-CCEEEEeCC
Confidence 4688999999999999 999999885
No 260
>PRK06924 short chain dehydrogenase; Provisional
Probab=56.63 E-value=13 Score=34.60 Aligned_cols=27 Identities=19% Similarity=0.251 Sum_probs=24.2
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.+|..|.++|++|+++||+|+.+.|..
T Consensus 9 asggiG~~ia~~l~~~g~~V~~~~r~~ 35 (251)
T PRK06924 9 TSQGLGEAIANQLLEKGTHVISISRTE 35 (251)
T ss_pred CCchHHHHHHHHHHhcCCEEEEEeCCc
Confidence 678999999999999999999988753
No 261
>PLN00016 RNA-binding protein; Provisional
Probab=56.63 E-value=11 Score=38.08 Aligned_cols=28 Identities=18% Similarity=0.164 Sum_probs=25.4
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
.||..|..++++|+++||.|+.+.|..+
T Consensus 64 atG~iG~~lv~~L~~~G~~V~~l~R~~~ 91 (378)
T PLN00016 64 GHAFIGFYLAKELVKAGHEVTLFTRGKE 91 (378)
T ss_pred CceeEhHHHHHHHHHCCCEEEEEecCCc
Confidence 5789999999999999999999999754
No 262
>PRK07041 short chain dehydrogenase; Provisional
Probab=56.62 E-value=12 Score=34.43 Aligned_cols=26 Identities=19% Similarity=0.266 Sum_probs=23.7
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|+.|+++|+.|+.+.|.
T Consensus 5 as~~iG~~~a~~l~~~G~~v~~~~r~ 30 (230)
T PRK07041 5 GSSGIGLALARAFAAEGARVTIASRS 30 (230)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 46788999999999999999999886
No 263
>PRK08177 short chain dehydrogenase; Provisional
Probab=56.32 E-value=13 Score=34.33 Aligned_cols=27 Identities=22% Similarity=0.349 Sum_probs=24.1
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.+|.-|.++|+.|+++||.|+.+.|..
T Consensus 9 ~sg~iG~~la~~l~~~G~~V~~~~r~~ 35 (225)
T PRK08177 9 ASRGLGLGLVDRLLERGWQVTATVRGP 35 (225)
T ss_pred CCchHHHHHHHHHHhCCCEEEEEeCCC
Confidence 367889999999999999999998873
No 264
>PRK12828 short chain dehydrogenase; Provisional
Probab=55.65 E-value=12 Score=34.18 Aligned_cols=26 Identities=19% Similarity=0.386 Sum_probs=23.9
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+||.-|.++|+.|+++|+.|+.+.|.
T Consensus 15 atg~iG~~la~~l~~~G~~v~~~~r~ 40 (239)
T PRK12828 15 GFGGLGRATAAWLAARGARVALIGRG 40 (239)
T ss_pred CCCcHhHHHHHHHHHCCCeEEEEeCC
Confidence 56888999999999999999999986
No 265
>PRK07774 short chain dehydrogenase; Provisional
Probab=55.40 E-value=12 Score=34.68 Aligned_cols=30 Identities=27% Similarity=0.359 Sum_probs=25.4
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+- .||..|.++|++|+++|+.|+.+.|.
T Consensus 10 lItG-asg~iG~~la~~l~~~g~~vi~~~r~ 39 (250)
T PRK07774 10 IVTG-AAGGIGQAYAEALAREGASVVVADIN 39 (250)
T ss_pred EEEC-CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4444 56788999999999999999999886
No 266
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=55.26 E-value=20 Score=27.78 Aligned_cols=28 Identities=21% Similarity=0.172 Sum_probs=25.1
Q ss_pred CChhHHHHHHHHHHCCCEEEEEeccCch
Q psy14323 161 AGTRGASSVEYFVEQGYAVLFVYSTCVE 188 (400)
Q Consensus 161 SG~~GaaiAe~fl~~G~~Vifl~~~~~~ 188 (400)
+|..|..+|.++.+.|.+|+++++...+
T Consensus 7 gG~ig~E~A~~l~~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 7 GGFIGIELAEALAELGKEVTLIERSDRL 34 (80)
T ss_dssp SSHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred cCHHHHHHHHHHHHhCcEEEEEeccchh
Confidence 6889999999999999999999997543
No 267
>PRK06101 short chain dehydrogenase; Provisional
Probab=55.20 E-value=12 Score=34.86 Aligned_cols=26 Identities=23% Similarity=0.327 Sum_probs=23.5
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|+.|+++||.|+.+.|.
T Consensus 9 as~giG~~la~~L~~~G~~V~~~~r~ 34 (240)
T PRK06101 9 ATSGIGKQLALDYAKQGWQVIACGRN 34 (240)
T ss_pred CCcHHHHHHHHHHHhCCCEEEEEECC
Confidence 46788999999999999999999886
No 268
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=55.10 E-value=14 Score=36.29 Aligned_cols=37 Identities=24% Similarity=0.312 Sum_probs=31.4
Q ss_pred cceeeeecCCcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 4 NTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 4 ~~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
|+++-|.-.-+|.||..+|..|+.+|+.|++.-+...
T Consensus 3 ~~~~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~ 39 (286)
T PRK07819 3 DAIQRVGVVGAGQMGAGIAEVCARAGVDVLVFETTEE 39 (286)
T ss_pred CCccEEEEEcccHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 5566677778999999999999999999999887643
No 269
>PRK08324 short chain dehydrogenase; Validated
Probab=55.03 E-value=41 Score=37.21 Aligned_cols=31 Identities=19% Similarity=0.337 Sum_probs=25.4
Q ss_pred eEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 154 RFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 154 RfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
=.|+- .+|..|.++|+.|.++|+.|+.+.+.
T Consensus 425 vLVTG-asggIG~~la~~L~~~Ga~Vvl~~r~ 455 (681)
T PRK08324 425 ALVTG-AAGGIGKATAKRLAAEGACVVLADLD 455 (681)
T ss_pred EEEec-CCCHHHHHHHHHHHHCcCEEEEEeCC
Confidence 34443 36789999999999999999998875
No 270
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=54.93 E-value=12 Score=34.81 Aligned_cols=30 Identities=20% Similarity=0.178 Sum_probs=25.0
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+.- ||.-|.++|++|+++||.|+.+.|.
T Consensus 8 lItG~-sg~iG~~la~~l~~~g~~v~~~~r~ 37 (258)
T PRK12429 8 LVTGA-ASGIGLEIALALAKEGAKVVIADLN 37 (258)
T ss_pred EEECC-CchHHHHHHHHHHHCCCeEEEEeCC
Confidence 34444 5677999999999999999999886
No 271
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=54.86 E-value=12 Score=35.84 Aligned_cols=28 Identities=14% Similarity=0.223 Sum_probs=25.9
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
.||..|..++++|+++|+.|+.+.|..+
T Consensus 7 atG~iG~~vv~~L~~~g~~V~~~~R~~~ 34 (285)
T TIGR03649 7 GTGKTASRIARLLQAASVPFLVASRSSS 34 (285)
T ss_pred CCChHHHHHHHHHHhCCCcEEEEeCCCc
Confidence 5899999999999999999999999854
No 272
>PLN02583 cinnamoyl-CoA reductase
Probab=54.80 E-value=12 Score=36.43 Aligned_cols=26 Identities=23% Similarity=0.355 Sum_probs=23.8
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||..|.+++++|+++||.|+.+.|.
T Consensus 14 atG~IG~~lv~~Ll~~G~~V~~~~R~ 39 (297)
T PLN02583 14 ASGYVGFWLVKRLLSRGYTVHAAVQK 39 (297)
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 47899999999999999999999885
No 273
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=54.73 E-value=15 Score=33.64 Aligned_cols=31 Identities=19% Similarity=0.388 Sum_probs=26.9
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCCCCC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNSIRP 43 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~~~p 43 (400)
.||.-|.+++++|+++|+.|+-+.|.....+
T Consensus 6 atG~iG~~l~~~l~~~g~~v~~~~~~~~~~~ 36 (236)
T PF01370_consen 6 ATGFIGSALVRQLLKKGHEVIVLSRSSNSES 36 (236)
T ss_dssp TTSHHHHHHHHHHHHTTTEEEEEESCSTGGH
T ss_pred cCCHHHHHHHHHHHHcCCccccccccccccc
Confidence 4799999999999999999998888866544
No 274
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=54.66 E-value=13 Score=37.29 Aligned_cols=26 Identities=12% Similarity=0.170 Sum_probs=24.2
Q ss_pred cccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
||.+|..+|..|+++||.|+..||+.
T Consensus 168 s~ivG~PmA~~L~~~gatVtv~~~~t 193 (301)
T PRK14194 168 SNIVGKPMAALLLQAHCSVTVVHSRS 193 (301)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCC
Confidence 57999999999999999999999874
No 275
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=54.34 E-value=13 Score=34.32 Aligned_cols=30 Identities=13% Similarity=0.223 Sum_probs=25.7
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+- .||.-|.++|++|+.+|+.|+++.|.
T Consensus 11 lVtG-~sg~iG~~l~~~L~~~G~~Vi~~~r~ 40 (239)
T PRK07666 11 LITG-AGRGIGRAVAIALAKEGVNVGLLART 40 (239)
T ss_pred EEEc-CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4444 47788999999999999999999886
No 276
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=54.24 E-value=13 Score=34.05 Aligned_cols=30 Identities=23% Similarity=0.354 Sum_probs=25.4
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+. .||.-|.++|+.|+++||.|+.+.|+
T Consensus 9 lItG-~sg~iG~~l~~~l~~~G~~v~~~~~~ 38 (248)
T PRK05557 9 LVTG-ASRGIGRAIAERLAAQGANVVINYAS 38 (248)
T ss_pred EEEC-CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5555 46789999999999999999888876
No 277
>PRK07063 short chain dehydrogenase; Provisional
Probab=54.14 E-value=13 Score=34.87 Aligned_cols=30 Identities=27% Similarity=0.323 Sum_probs=24.6
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+- .+|..|.++|+.|+++|+.|+++.|.
T Consensus 11 lVtG-as~gIG~~~a~~l~~~G~~vv~~~r~ 40 (260)
T PRK07063 11 LVTG-AAQGIGAAIARAFAREGAAVALADLD 40 (260)
T ss_pred EEEC-CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3444 45677999999999999999998875
No 278
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=54.14 E-value=17 Score=28.88 Aligned_cols=25 Identities=28% Similarity=0.410 Sum_probs=22.6
Q ss_pred CCChhHHHHHHHHHHCC---CEEEEEec
Q psy14323 160 SAGTRGASSVEYFVEQG---YAVLFVYS 184 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G---~~Vifl~~ 184 (400)
-+|.||.++++.++..| ++|++++.
T Consensus 6 G~G~mg~al~~~l~~~g~~~~~v~~~~~ 33 (96)
T PF03807_consen 6 GAGNMGSALARGLLASGIKPHEVIIVSS 33 (96)
T ss_dssp STSHHHHHHHHHHHHTTS-GGEEEEEEE
T ss_pred CCCHHHHHHHHHHHHCCCCceeEEeecc
Confidence 57999999999999999 99998844
No 279
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=54.02 E-value=45 Score=33.74 Aligned_cols=35 Identities=9% Similarity=0.028 Sum_probs=28.7
Q ss_pred CceeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 151 NTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 151 d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
...|.+=-=.+|.-|.++++++.++||+|+.+.+.
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~ 54 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWK 54 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEec
Confidence 33455544678999999999999999999999874
No 280
>PRK07041 short chain dehydrogenase; Provisional
Probab=54.02 E-value=16 Score=33.54 Aligned_cols=26 Identities=15% Similarity=0.211 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|+.|+++|+.|+.+.|+
T Consensus 5 as~~iG~~~a~~l~~~G~~v~~~~r~ 30 (230)
T PRK07041 5 GSSGIGLALARAFAAEGARVTIASRS 30 (230)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 46889999999999999999999885
No 281
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=53.74 E-value=15 Score=35.41 Aligned_cols=28 Identities=32% Similarity=0.456 Sum_probs=25.4
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
++|..|..+|++|+++||.|+.+.|..+
T Consensus 8 ~~G~iG~~l~~~L~~~g~~V~~~~r~~~ 35 (328)
T TIGR03466 8 ATGFVGSAVVRLLLEQGEEVRVLVRPTS 35 (328)
T ss_pred CccchhHHHHHHHHHCCCEEEEEEecCc
Confidence 5789999999999999999999999754
No 282
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=53.67 E-value=13 Score=35.11 Aligned_cols=30 Identities=27% Similarity=0.402 Sum_probs=24.5
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+- .||.-|.++|+.|+++|+.|+.+.|.
T Consensus 9 lItG-as~gIG~~ia~~l~~~G~~V~~~~r~ 38 (262)
T TIGR03325 9 LVTG-GASGLGRAIVDRFVAEGARVAVLDKS 38 (262)
T ss_pred EEEC-CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4443 35668999999999999999998775
No 283
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=53.24 E-value=14 Score=32.93 Aligned_cols=25 Identities=24% Similarity=0.429 Sum_probs=22.1
Q ss_pred cccchHHHHHHHHHCCCeEEEEeec
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|.||..+|..|+++||.|+...|.
T Consensus 9 lG~mG~~~a~~L~~~g~~v~~~d~~ 33 (163)
T PF03446_consen 9 LGNMGSAMARNLAKAGYEVTVYDRS 33 (163)
T ss_dssp -SHHHHHHHHHHHHTTTEEEEEESS
T ss_pred hHHHHHHHHHHHHhcCCeEEeeccc
Confidence 5999999999999999999887665
No 284
>PRK08265 short chain dehydrogenase; Provisional
Probab=53.21 E-value=14 Score=35.02 Aligned_cols=32 Identities=28% Similarity=0.268 Sum_probs=26.1
Q ss_pred eeeeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 6 VRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 6 vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+-+|+- .||.-|.++|+.|+++|+.|+++.|.
T Consensus 8 ~vlItG-as~gIG~~ia~~l~~~G~~V~~~~r~ 39 (261)
T PRK08265 8 VAIVTG-GATLIGAAVARALVAAGARVAIVDID 39 (261)
T ss_pred EEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 334554 45678999999999999999999886
No 285
>PRK06841 short chain dehydrogenase; Provisional
Probab=53.18 E-value=14 Score=34.54 Aligned_cols=26 Identities=27% Similarity=0.388 Sum_probs=23.3
Q ss_pred cccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
+|.-|.++|+.|+++|+.|+.+.|..
T Consensus 24 s~~IG~~la~~l~~~G~~Vi~~~r~~ 49 (255)
T PRK06841 24 ASGIGHAIAELFAAKGARVALLDRSE 49 (255)
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 57789999999999999999998863
No 286
>PRK06483 dihydromonapterin reductase; Provisional
Probab=52.93 E-value=15 Score=34.05 Aligned_cols=27 Identities=22% Similarity=0.337 Sum_probs=23.6
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.+|..|.++|+.|+++|+.|+.+.|..
T Consensus 10 as~gIG~~ia~~l~~~G~~V~~~~r~~ 36 (236)
T PRK06483 10 AGQRIGLALAWHLLAQGQPVIVSYRTH 36 (236)
T ss_pred CCChHHHHHHHHHHHCCCeEEEEeCCc
Confidence 457789999999999999999988863
No 287
>PRK08339 short chain dehydrogenase; Provisional
Probab=52.76 E-value=15 Score=35.09 Aligned_cols=30 Identities=23% Similarity=0.351 Sum_probs=24.1
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+- .||--|.++|+.|+++||.|++..|.
T Consensus 12 lItG-as~gIG~aia~~l~~~G~~V~~~~r~ 41 (263)
T PRK08339 12 FTTA-SSKGIGFGVARVLARAGADVILLSRN 41 (263)
T ss_pred EEeC-CCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 4444 34567999999999999999998875
No 288
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=52.75 E-value=14 Score=34.58 Aligned_cols=26 Identities=23% Similarity=0.243 Sum_probs=23.3
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|.-|.++|++|+++||.|+.+.|.
T Consensus 18 a~g~iG~~ia~~l~~~G~~V~~~~r~ 43 (255)
T PRK07523 18 SSQGIGYALAEGLAQAGAEVILNGRD 43 (255)
T ss_pred CcchHHHHHHHHHHHcCCEEEEEeCC
Confidence 46788999999999999999998875
No 289
>PRK06101 short chain dehydrogenase; Provisional
Probab=52.56 E-value=17 Score=33.90 Aligned_cols=26 Identities=15% Similarity=0.222 Sum_probs=23.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++|+.|+++|++|+.+.|+
T Consensus 9 as~giG~~la~~L~~~G~~V~~~~r~ 34 (240)
T PRK06101 9 ATSGIGKQLALDYAKQGWQVIACGRN 34 (240)
T ss_pred CCcHHHHHHHHHHHhCCCEEEEEECC
Confidence 46889999999999999999999875
No 290
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=52.51 E-value=14 Score=35.54 Aligned_cols=32 Identities=9% Similarity=0.135 Sum_probs=25.6
Q ss_pred eeeecCC-cccchHHHHHHHHHCCCeEEEEeec
Q psy14323 7 RFVDNFS-AGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 7 r~i~n~s-sg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
=.|+-=| ++--|.++|+.|+++||.|++.+|.
T Consensus 13 ~lItGas~~~GIG~aia~~la~~G~~V~l~~r~ 45 (272)
T PRK08159 13 GLILGVANNRSIAWGIAKACRAAGAELAFTYQG 45 (272)
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc
Confidence 3455555 4678999999999999999987764
No 291
>PRK07326 short chain dehydrogenase; Provisional
Probab=52.47 E-value=15 Score=33.78 Aligned_cols=26 Identities=23% Similarity=0.378 Sum_probs=24.2
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|.-|.++|.+|+++|+.|+.+.|.
T Consensus 14 atg~iG~~la~~l~~~g~~V~~~~r~ 39 (237)
T PRK07326 14 GSKGIGFAIAEALLAEGYKVAITARD 39 (237)
T ss_pred CCCcHHHHHHHHHHHCCCEEEEeeCC
Confidence 58999999999999999999999886
No 292
>PRK07577 short chain dehydrogenase; Provisional
Probab=52.46 E-value=16 Score=33.49 Aligned_cols=28 Identities=14% Similarity=0.084 Sum_probs=24.5
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
.||.-|.++|++|+++|+.|+.+.|...
T Consensus 11 ~s~~iG~~ia~~l~~~G~~v~~~~r~~~ 38 (234)
T PRK07577 11 ATKGIGLALSLRLANLGHQVIGIARSAI 38 (234)
T ss_pred CCCcHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4678899999999999999999988743
No 293
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=51.86 E-value=14 Score=33.75 Aligned_cols=31 Identities=16% Similarity=0.197 Sum_probs=25.9
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.|+. .||.-|..+|++|+++||.|+.+.|..
T Consensus 9 lItG-asg~iG~~l~~~l~~~g~~v~~~~r~~ 39 (246)
T PRK05653 9 LVTG-ASRGIGRAIALRLAADGAKVVIYDSNE 39 (246)
T ss_pred EEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3444 368899999999999999999999873
No 294
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=51.66 E-value=15 Score=34.30 Aligned_cols=27 Identities=15% Similarity=0.308 Sum_probs=24.3
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.+|..|.++|++|+++|+.|+.+.|..
T Consensus 20 ~~g~iG~~la~~l~~~G~~Vi~~~r~~ 46 (247)
T PRK08945 20 AGDGIGREAALTYARHGATVILLGRTE 46 (247)
T ss_pred CCchHHHHHHHHHHHCCCcEEEEeCCH
Confidence 578899999999999999999998863
No 295
>PRK08177 short chain dehydrogenase; Provisional
Probab=51.63 E-value=18 Score=33.32 Aligned_cols=27 Identities=19% Similarity=0.244 Sum_probs=24.0
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.+|..|.++|+.|+++|+.|+.+.+..
T Consensus 9 ~sg~iG~~la~~l~~~G~~V~~~~r~~ 35 (225)
T PRK08177 9 ASRGLGLGLVDRLLERGWQVTATVRGP 35 (225)
T ss_pred CCchHHHHHHHHHHhCCCEEEEEeCCC
Confidence 368899999999999999999998763
No 296
>PRK12320 hypothetical protein; Provisional
Probab=51.60 E-value=40 Score=37.74 Aligned_cols=26 Identities=19% Similarity=0.253 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|..+++.++++||+|+.+.+.
T Consensus 8 AaGFIGs~La~~Ll~~G~~Vi~ldr~ 33 (699)
T PRK12320 8 ATGAVGRSVTRQLIAAGHTVSGIAQH 33 (699)
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 58999999999999999999998864
No 297
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=51.48 E-value=49 Score=36.11 Aligned_cols=102 Identities=11% Similarity=0.191 Sum_probs=59.1
Q ss_pred hHHHHHHHHhhhhcCceEEEeccCHHHHHHHHHHHHHHHhhcc-----ChHHHHHHHHHHhhcC--CCCcCCCCceeecc
Q psy14323 77 LRPILDRYARVKRDSLLLSVEFTTLAEYLWLLRTVCESLQDEG-----NRVLLYLAAAVADFYI--PADQMSGGTTVPME 149 (400)
Q Consensus 77 ~~~~~~~y~~~~~~~~Ll~i~f~Tv~eYl~~L~~i~~~l~~~~-----~~~~~~laaaVsd~~~--p~~~~~G~t~~~l~ 149 (400)
+.+++++|.. +.-+..||.-+-.+.-..+..+. ..+ -+-+-.+...+++ .. ...+.-|...++++
T Consensus 169 i~~~v~~~~~---~~iiiAips~~~~~~~~i~~~l~----~~~~~v~~lP~~~~l~~~~~~-lreI~ieDLLgR~pV~~d 240 (588)
T COG1086 169 IERVVEELGI---QLILIAIPSASQEERRRILLRLA----RTGIAVRILPQLTDLKDLNGQ-LREIEIEDLLGRPPVALD 240 (588)
T ss_pred HHHHHHHcCC---ceEEEecCCCCHHHHHHHHHHHH----hcCCcEEecCcHHHHHHhccc-cccCCHHHHhCCCCCCCC
Confidence 7777777744 25688899988888776655543 332 1112222222222 11 01113354444442
Q ss_pred cCce-eEEec------CCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 150 HNTV-RFVDN------FSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 150 ~d~V-RfIdN------fSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
...+ .++++ =-+|.-|+++++.+++.+.+.+.+.+..
T Consensus 241 ~~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~ 284 (588)
T COG1086 241 TELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRD 284 (588)
T ss_pred HHHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCc
Confidence 2222 33333 3789999999999999999888877653
No 298
>PRK06179 short chain dehydrogenase; Provisional
Probab=51.41 E-value=15 Score=34.67 Aligned_cols=31 Identities=26% Similarity=0.400 Sum_probs=26.0
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
+|+- .||..|.++|++|+++|+.|+.+.|..
T Consensus 8 lVtG-asg~iG~~~a~~l~~~g~~V~~~~r~~ 38 (270)
T PRK06179 8 LVTG-ASSGIGRATAEKLARAGYRVFGTSRNP 38 (270)
T ss_pred EEec-CCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4555 467789999999999999999998863
No 299
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=51.38 E-value=15 Score=34.88 Aligned_cols=31 Identities=13% Similarity=0.183 Sum_probs=25.5
Q ss_pred eeecCC-cccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFS-AGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~s-sg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+==| |+-.|.++|+.|+++|+.|++..|.
T Consensus 11 lItGa~~s~GIG~aia~~la~~G~~v~~~~r~ 42 (257)
T PRK08594 11 VVMGVANKRSIAWGIARSLHNAGAKLVFTYAG 42 (257)
T ss_pred EEECCCCCCCHHHHHHHHHHHCCCEEEEecCc
Confidence 455555 3788999999999999999998764
No 300
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=51.28 E-value=14 Score=34.87 Aligned_cols=26 Identities=23% Similarity=0.413 Sum_probs=22.5
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||--|.++|++|+++|+.|++++|+
T Consensus 16 as~gIG~~ia~~l~~~G~~v~~~~~~ 41 (260)
T PRK08416 16 GTRGIGKAIVYEFAQSGVNIAFTYNS 41 (260)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 45667999999999999999998765
No 301
>CHL00194 ycf39 Ycf39; Provisional
Probab=51.25 E-value=13 Score=36.47 Aligned_cols=28 Identities=32% Similarity=0.472 Sum_probs=25.5
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
.||.-|..++++|+++||.|+.+.|..+
T Consensus 8 atG~iG~~lv~~Ll~~g~~V~~l~R~~~ 35 (317)
T CHL00194 8 ATGTLGRQIVRQALDEGYQVRCLVRNLR 35 (317)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEEEcChH
Confidence 5899999999999999999999998754
No 302
>PRK06523 short chain dehydrogenase; Provisional
Probab=51.19 E-value=16 Score=34.20 Aligned_cols=31 Identities=26% Similarity=0.357 Sum_probs=25.7
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
+|+- .||.-|.++|++|+++|+.|+.+.|..
T Consensus 13 lItG-as~gIG~~ia~~l~~~G~~v~~~~r~~ 43 (260)
T PRK06523 13 LVTG-GTKGIGAATVARLLEAGARVVTTARSR 43 (260)
T ss_pred EEEC-CCCchhHHHHHHHHHCCCEEEEEeCCh
Confidence 4444 456789999999999999999999874
No 303
>PRK08643 acetoin reductase; Validated
Probab=51.18 E-value=16 Score=34.12 Aligned_cols=30 Identities=27% Similarity=0.368 Sum_probs=24.8
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+- .||.-|.++|++|+++||.|+.+.|.
T Consensus 6 lItG-as~giG~~la~~l~~~G~~v~~~~r~ 35 (256)
T PRK08643 6 LVTG-AGQGIGFAIAKRLVEDGFKVAIVDYN 35 (256)
T ss_pred EEEC-CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4554 45668999999999999999999875
No 304
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=51.13 E-value=15 Score=34.20 Aligned_cols=25 Identities=16% Similarity=0.076 Sum_probs=22.0
Q ss_pred cccchHHHHHHHHHCCCeEEEEeec
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|.-|.++|++|+++||.|+.+.|.
T Consensus 14 s~gIG~~ia~~l~~~G~~vi~~~r~ 38 (248)
T TIGR01832 14 NTGLGQGIAVGLAEAGADIVGAGRS 38 (248)
T ss_pred CchHHHHHHHHHHHCCCEEEEEcCc
Confidence 4567999999999999999998764
No 305
>PRK08226 short chain dehydrogenase; Provisional
Probab=51.09 E-value=15 Score=34.51 Aligned_cols=30 Identities=10% Similarity=0.213 Sum_probs=24.7
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+-= ||.-|.++|+.|+++||.|+.+.|.
T Consensus 10 lItG~-s~giG~~la~~l~~~G~~Vv~~~r~ 39 (263)
T PRK08226 10 LITGA-LQGIGEGIARVFARHGANLILLDIS 39 (263)
T ss_pred EEeCC-CChHHHHHHHHHHHCCCEEEEecCC
Confidence 34433 5778999999999999999999876
No 306
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=51.07 E-value=18 Score=34.25 Aligned_cols=31 Identities=16% Similarity=0.249 Sum_probs=26.8
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCCCCC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNSIRP 43 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~~~p 43 (400)
.||.-|..++++|+++||.|+.+.|.....+
T Consensus 6 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 36 (292)
T TIGR01777 6 GTGFIGRALTQRLTKDGHEVTILTRSPPAGA 36 (292)
T ss_pred ccchhhHHHHHHHHHcCCEEEEEeCCCCCCC
Confidence 5789999999999999999999999765433
No 307
>PRK07478 short chain dehydrogenase; Provisional
Probab=51.00 E-value=16 Score=34.15 Aligned_cols=25 Identities=20% Similarity=0.341 Sum_probs=22.6
Q ss_pred cccchHHHHHHHHHCCCeEEEEeec
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
||.-|.++|+.|+++|+.|+++.|.
T Consensus 15 s~giG~~ia~~l~~~G~~v~~~~r~ 39 (254)
T PRK07478 15 SSGIGRAAAKLFAREGAKVVVGARR 39 (254)
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5678999999999999999999886
No 308
>cd01134 V_A-ATPase_A V/A-type ATP synthase catalytic subunit A. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi apparatus and in other coated vesicles in eukaryotes. Archaea have a protein which is similar in sequence to V-ATPases, but functions like an F-ATPase (called A-ATPase). A similar protein is also found in a few bacteria.
Probab=50.80 E-value=17 Score=37.41 Aligned_cols=27 Identities=26% Similarity=0.450 Sum_probs=23.0
Q ss_pred CChhHHHHHHHHHHCCCEEEEEeccCc
Q psy14323 161 AGTRGASSVEYFVEQGYAVLFVYSTCV 187 (400)
Q Consensus 161 SG~~GaaiAe~fl~~G~~Vifl~~~~~ 187 (400)
+..+|.++||||..+|++|.++.-+.+
T Consensus 238 s~yta~tiAEYfrd~G~dVll~~Ds~t 264 (369)
T cd01134 238 SIYTGITIAEYFRDMGYNVALMADSTS 264 (369)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEcChh
Confidence 356899999999999999999987643
No 309
>KOG1208|consensus
Probab=50.79 E-value=53 Score=33.01 Aligned_cols=33 Identities=15% Similarity=0.181 Sum_probs=27.3
Q ss_pred eeEEecCCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 153 VRFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 153 VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
|=.||--++ -.|.+.|+.++.+|+.|++..|..
T Consensus 37 ~~vVTGans-GIG~eta~~La~~Ga~Vv~~~R~~ 69 (314)
T KOG1208|consen 37 VALVTGATS-GIGFETARELALRGAHVVLACRNE 69 (314)
T ss_pred EEEEECCCC-chHHHHHHHHHhCCCEEEEEeCCH
Confidence 445565555 689999999999999999999974
No 310
>PRK05875 short chain dehydrogenase; Provisional
Probab=50.67 E-value=16 Score=34.70 Aligned_cols=30 Identities=30% Similarity=0.361 Sum_probs=24.8
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+- .+|.-|.++|++|+++||.|+++.|.
T Consensus 11 lItG-asg~IG~~la~~l~~~G~~V~~~~r~ 40 (276)
T PRK05875 11 LVTG-GGSGIGKGVAAGLVAAGAAVMIVGRN 40 (276)
T ss_pred EEEC-CCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4444 45678999999999999999998876
No 311
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=50.65 E-value=23 Score=35.33 Aligned_cols=28 Identities=14% Similarity=0.112 Sum_probs=25.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccCc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTCV 187 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~~ 187 (400)
+||-.|.+++..+.+.|++|+.+.|+..
T Consensus 6 gTGlIG~~L~~~L~~~gh~v~iltR~~~ 33 (297)
T COG1090 6 GTGLIGRALTARLRKGGHQVTILTRRPP 33 (297)
T ss_pred cccchhHHHHHHHHhCCCeEEEEEcCCc
Confidence 6899999999999999999999999743
No 312
>PRK07454 short chain dehydrogenase; Provisional
Probab=50.49 E-value=16 Score=33.75 Aligned_cols=31 Identities=16% Similarity=0.400 Sum_probs=26.1
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
+|+- .||.-|.++|++|+++|+.|+.+.|..
T Consensus 10 lItG-~sg~iG~~la~~l~~~G~~V~~~~r~~ 40 (241)
T PRK07454 10 LITG-ASSGIGKATALAFAKAGWDLALVARSQ 40 (241)
T ss_pred EEeC-CCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4443 578899999999999999999998863
No 313
>PRK06196 oxidoreductase; Provisional
Probab=50.44 E-value=16 Score=35.79 Aligned_cols=26 Identities=15% Similarity=0.196 Sum_probs=23.4
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||..|.++|++|+++|+.|+.+.|.
T Consensus 34 asggIG~~~a~~L~~~G~~Vv~~~R~ 59 (315)
T PRK06196 34 GYSGLGLETTRALAQAGAHVIVPARR 59 (315)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 46778999999999999999998876
No 314
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=50.34 E-value=17 Score=34.12 Aligned_cols=26 Identities=23% Similarity=0.215 Sum_probs=23.2
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|+.|+++|+.|+.+.|.
T Consensus 16 as~gIG~~la~~l~~~G~~v~~~~r~ 41 (260)
T PRK12823 16 AAQGIGRGVALRAAAEGARVVLVDRS 41 (260)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 46778999999999999999998775
No 315
>PRK07023 short chain dehydrogenase; Provisional
Probab=50.21 E-value=18 Score=33.58 Aligned_cols=27 Identities=33% Similarity=0.365 Sum_probs=24.2
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.||.-|.++|++|+++|+.|+.+.|..
T Consensus 9 asggiG~~ia~~l~~~G~~v~~~~r~~ 35 (243)
T PRK07023 9 HSRGLGAALAEQLLQPGIAVLGVARSR 35 (243)
T ss_pred CCcchHHHHHHHHHhCCCEEEEEecCc
Confidence 578899999999999999999998763
No 316
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=50.16 E-value=17 Score=33.73 Aligned_cols=30 Identities=17% Similarity=0.119 Sum_probs=25.5
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+. .+|.-|.++|+.|+++|+.|+.+.|.
T Consensus 5 lItG-a~g~lG~~l~~~l~~~g~~v~~~~r~ 34 (255)
T TIGR01963 5 LVTG-AASGIGLAIALALAAAGANVVVNDLG 34 (255)
T ss_pred EEcC-CcchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3444 56788999999999999999999886
No 317
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=50.15 E-value=21 Score=31.83 Aligned_cols=25 Identities=20% Similarity=0.372 Sum_probs=21.8
Q ss_pred CChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 161 AGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 161 SG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.|.||..+|+.++++||.|+...+.
T Consensus 9 lG~mG~~~a~~L~~~g~~v~~~d~~ 33 (163)
T PF03446_consen 9 LGNMGSAMARNLAKAGYEVTVYDRS 33 (163)
T ss_dssp -SHHHHHHHHHHHHTTTEEEEEESS
T ss_pred hHHHHHHHHHHHHhcCCeEEeeccc
Confidence 4999999999999999999876654
No 318
>PRK06114 short chain dehydrogenase; Provisional
Probab=50.14 E-value=18 Score=34.02 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=26.2
Q ss_pred eeeeecCCcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 6 VRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 6 vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
+=+|+- .||--|.++|+.|+++||.|+++.|..
T Consensus 10 ~~lVtG-~s~gIG~~ia~~l~~~G~~v~~~~r~~ 42 (254)
T PRK06114 10 VAFVTG-AGSGIGQRIAIGLAQAGADVALFDLRT 42 (254)
T ss_pred EEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCCc
Confidence 335555 455689999999999999999998863
No 319
>cd06353 PBP1_BmpA_Med_like Periplasmic binding domain of the basic membrane lipoprotein Med in Bacillus and its close homologs from other bacteria and Archaea. Periplasmic binding domain of the basic membrane lipoprotein Med in Bacillus and its close homologs from other bacteria and Archaea. Med, a cell-surface localized protein, which regulates the competence transcription factor gene comK in Bacillus subtilis, lacks the DNA binding domain when compared with structures of transcription regulators from the LacI family. Nevertheless, Med has significant overall sequence homology to various periplasmic substrate-binding proteins. Moreover, the structure of Med shows a striking similarity to PnrA, a periplasmic nucleoside binding protein of an ATP-binding cassette transport system. Members of this group contain the type I periplasmic sugar-binding protein-like fold.
Probab=50.03 E-value=2.2e+02 Score=27.32 Aligned_cols=32 Identities=13% Similarity=0.280 Sum_probs=28.7
Q ss_pred eeEEecCCCChhHHHHHHHHHHCCCEEEEEec
Q psy14323 153 VRFVDNFSAGTRGASSVEYFVEQGYAVLFVYS 184 (400)
Q Consensus 153 VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~ 184 (400)
++++.+|.--..|..+|+.++..|++|+|-..
T Consensus 156 ~~~~g~~~D~~~a~~~a~~l~~~G~DvI~~~~ 187 (258)
T cd06353 156 VIWTGSWFDPAKEKEAALALIDQGADVIYQHT 187 (258)
T ss_pred EEEecCCCCcHHHHHHHHHHHHCCCcEEEecC
Confidence 57888888889999999999999999998775
No 320
>PRK09072 short chain dehydrogenase; Provisional
Probab=49.92 E-value=17 Score=34.25 Aligned_cols=26 Identities=31% Similarity=0.432 Sum_probs=23.5
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||..|.++|+.|+++||.|+.+.|.
T Consensus 13 ~s~~iG~~ia~~l~~~G~~V~~~~r~ 38 (263)
T PRK09072 13 ASGGIGQALAEALAAAGARLLLVGRN 38 (263)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEECC
Confidence 45788999999999999999999886
No 321
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=49.80 E-value=15 Score=35.04 Aligned_cols=26 Identities=19% Similarity=0.300 Sum_probs=24.0
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.+++++|+++||.|+.+.|.
T Consensus 7 ~tG~iG~~l~~~l~~~g~~v~~~~r~ 32 (287)
T TIGR01214 7 ANGQLGRELVQQLSPEGRVVVALTSS 32 (287)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence 57999999999999999999998875
No 322
>PRK06182 short chain dehydrogenase; Validated
Probab=49.80 E-value=17 Score=34.51 Aligned_cols=30 Identities=23% Similarity=0.325 Sum_probs=25.1
Q ss_pred eecCCcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 9 VDNFSAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 9 i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
|+- .||..|.++|++|+++|+.|+.+.|..
T Consensus 8 ItG-asggiG~~la~~l~~~G~~V~~~~r~~ 37 (273)
T PRK06182 8 VTG-ASSGIGKATARRLAAQGYTVYGAARRV 37 (273)
T ss_pred EEC-CCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 444 567789999999999999999988763
No 323
>KOG1372|consensus
Probab=49.80 E-value=18 Score=35.73 Aligned_cols=38 Identities=24% Similarity=0.436 Sum_probs=31.2
Q ss_pred ceeeeecCCcccchHHHHHHHHHCCCeEEEEeecCCCCC
Q psy14323 5 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRNNSIRP 43 (400)
Q Consensus 5 ~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~~~~p 43 (400)
.|-.|+-. ||.-|+.+||.++.+||+|-=|-|+.|-+-
T Consensus 29 kvALITGI-tGQDGSYLaEfLL~KgYeVHGiiRRsSsFN 66 (376)
T KOG1372|consen 29 KVALITGI-TGQDGSYLAEFLLSKGYEVHGIIRRSSSFN 66 (376)
T ss_pred eEEEEecc-cCCCchHHHHHHHhCCceeeEEEeeccccc
Confidence 35556554 689999999999999999999989877654
No 324
>KOG2304|consensus
Probab=49.80 E-value=37 Score=33.16 Aligned_cols=36 Identities=19% Similarity=0.238 Sum_probs=31.9
Q ss_pred CceeEEecCCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 151 NTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 151 d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.+++-++=+-+|.||+-||.-.+..|+.|+++.+..
T Consensus 9 ~~~~~V~ivGaG~MGSGIAQv~a~sg~~V~l~d~~~ 44 (298)
T KOG2304|consen 9 AEIKNVAIVGAGQMGSGIAQVAATSGLNVWLVDANE 44 (298)
T ss_pred ccccceEEEcccccchhHHHHHHhcCCceEEecCCH
Confidence 566777788999999999999999999999998754
No 325
>PRK07102 short chain dehydrogenase; Provisional
Probab=49.59 E-value=16 Score=33.85 Aligned_cols=27 Identities=7% Similarity=0.183 Sum_probs=24.0
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.||.-|.++|++|+++|+.|+.+.|..
T Consensus 9 as~giG~~~a~~l~~~G~~Vi~~~r~~ 35 (243)
T PRK07102 9 ATSDIARACARRYAAAGARLYLAARDV 35 (243)
T ss_pred CCcHHHHHHHHHHHhcCCEEEEEeCCH
Confidence 467889999999999999999998863
No 326
>PLN02583 cinnamoyl-CoA reductase
Probab=49.55 E-value=19 Score=35.05 Aligned_cols=26 Identities=23% Similarity=0.329 Sum_probs=23.9
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.||..|.++++.++++||+|+.+.|+
T Consensus 14 atG~IG~~lv~~Ll~~G~~V~~~~R~ 39 (297)
T PLN02583 14 ASGYVGFWLVKRLLSRGYTVHAAVQK 39 (297)
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 57999999999999999999998874
No 327
>PRK05867 short chain dehydrogenase; Provisional
Probab=49.30 E-value=17 Score=34.12 Aligned_cols=30 Identities=20% Similarity=0.294 Sum_probs=24.3
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+- .+|.-|.++|+.|+++|+.|++..|.
T Consensus 13 lVtG-as~gIG~~ia~~l~~~G~~V~~~~r~ 42 (253)
T PRK05867 13 LITG-ASTGIGKRVALAYVEAGAQVAIAARH 42 (253)
T ss_pred EEEC-CCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 3444 35667999999999999999998875
No 328
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=49.19 E-value=17 Score=33.85 Aligned_cols=26 Identities=23% Similarity=0.141 Sum_probs=23.4
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||..|.++|++|+++||.|+.+.|.
T Consensus 15 asg~iG~~la~~l~~~G~~v~~~~r~ 40 (262)
T PRK13394 15 AASGIGKEIALELARAGAAVAIADLN 40 (262)
T ss_pred CCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 46789999999999999999998775
No 329
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=49.13 E-value=18 Score=33.85 Aligned_cols=26 Identities=23% Similarity=0.319 Sum_probs=22.8
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|++|+++|+.|+.+.|.
T Consensus 8 asg~iG~~la~~l~~~G~~V~~~~r~ 33 (248)
T PRK10538 8 ATAGFGECITRRFIQQGHKVIATGRR 33 (248)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEECC
Confidence 45667999999999999999998876
No 330
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=49.08 E-value=17 Score=34.60 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=25.0
Q ss_pred eeecC-CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNF-SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~-ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+-= |++--|.++|+.|+++|+.|++.+|.
T Consensus 10 lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~ 41 (261)
T PRK08690 10 LITGMISERSIAYGIAKACREQGAELAFTYVV 41 (261)
T ss_pred EEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc
Confidence 45555 35678999999999999999987654
No 331
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=48.98 E-value=23 Score=33.56 Aligned_cols=31 Identities=16% Similarity=0.178 Sum_probs=26.5
Q ss_pred eeecCCc-ccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSA-GTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ss-g~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+-=|+ +.-|.++|+.|+++|+.|++..|.
T Consensus 14 lItGas~g~GIG~a~a~~la~~G~~v~l~~r~ 45 (258)
T PRK07533 14 LVVGIANEQSIAWGCARAFRALGAELAVTYLN 45 (258)
T ss_pred EEECCCCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 5666677 489999999999999999998775
No 332
>PRK08628 short chain dehydrogenase; Provisional
Probab=48.97 E-value=16 Score=34.21 Aligned_cols=31 Identities=23% Similarity=0.223 Sum_probs=25.5
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.|+- .||.-|.++|++|+++|+.|+.+.|..
T Consensus 11 lItG-asggiG~~la~~l~~~G~~v~~~~r~~ 41 (258)
T PRK08628 11 IVTG-GASGIGAAISLRLAEEGAIPVIFGRSA 41 (258)
T ss_pred EEeC-CCChHHHHHHHHHHHcCCcEEEEcCCh
Confidence 4444 356799999999999999999998864
No 333
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=48.63 E-value=6.4 Score=34.36 Aligned_cols=27 Identities=26% Similarity=0.380 Sum_probs=24.3
Q ss_pred CCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 12 FSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 12 ~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.-+|+-|.+++.+|.++|+.|.-++.+
T Consensus 16 IGaGrVG~~La~aL~~ag~~v~~v~sr 42 (127)
T PF10727_consen 16 IGAGRVGTALARALARAGHEVVGVYSR 42 (127)
T ss_dssp ECTSCCCCHHHHHHHHTTSEEEEESSC
T ss_pred ECCCHHHHHHHHHHHHCCCeEEEEEeC
Confidence 357999999999999999999998865
No 334
>KOG1209|consensus
Probab=48.59 E-value=29 Score=33.65 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=31.1
Q ss_pred cceeeeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 4 NTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 4 ~~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
-++=.|+--|+|.-|-++|.+|.+.||-|.--.|+
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARR 41 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccc
Confidence 34567899999999999999999999999987776
No 335
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=48.54 E-value=18 Score=34.50 Aligned_cols=31 Identities=10% Similarity=0.185 Sum_probs=24.8
Q ss_pred eeecCC-cccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFS-AGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~s-sg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+=-| ++..|.++|+.|++.|+.|++.+|.
T Consensus 10 lItGas~~~GIG~a~a~~l~~~G~~v~~~~~~ 41 (260)
T PRK06997 10 LITGLLSNRSIAYGIAKACKREGAELAFTYVG 41 (260)
T ss_pred EEeCCCCCCcHHHHHHHHHHHCCCeEEEEccc
Confidence 455543 5678999999999999999987653
No 336
>PRK05884 short chain dehydrogenase; Provisional
Probab=48.23 E-value=18 Score=33.55 Aligned_cols=26 Identities=23% Similarity=0.210 Sum_probs=23.2
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|..|.++|+.|+++|+.|+.+.|.
T Consensus 8 as~giG~~ia~~l~~~g~~v~~~~r~ 33 (223)
T PRK05884 8 GDTDLGRTIAEGFRNDGHKVTLVGAR 33 (223)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 45679999999999999999999876
No 337
>PRK06500 short chain dehydrogenase; Provisional
Probab=48.11 E-value=17 Score=33.55 Aligned_cols=26 Identities=19% Similarity=0.312 Sum_probs=23.1
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|..|.++|++|+++|+.|+.+.|.
T Consensus 14 asg~iG~~la~~l~~~g~~v~~~~r~ 39 (249)
T PRK06500 14 GTSGIGLETARQFLAEGARVAITGRD 39 (249)
T ss_pred CCchHHHHHHHHHHHCCCEEEEecCC
Confidence 36788999999999999999998775
No 338
>PRK09135 pteridine reductase; Provisional
Probab=48.06 E-value=18 Score=33.25 Aligned_cols=27 Identities=26% Similarity=0.378 Sum_probs=24.3
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.+|.-|..+|++|+++||.|+.+.|+.
T Consensus 14 a~g~iG~~l~~~l~~~g~~v~~~~r~~ 40 (249)
T PRK09135 14 GARRIGAAIARTLHAAGYRVAIHYHRS 40 (249)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 478899999999999999999998763
No 339
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=48.03 E-value=19 Score=32.93 Aligned_cols=27 Identities=19% Similarity=0.356 Sum_probs=23.6
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.+|.-|..+|+.|+++||.|+.+.|+.
T Consensus 6 ~~g~iG~~la~~l~~~G~~v~~~~r~~ 32 (239)
T TIGR01830 6 ASRGIGRAIALKLAKEGAKVIITYRSS 32 (239)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 366789999999999999999998863
No 340
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=47.92 E-value=16 Score=36.14 Aligned_cols=28 Identities=21% Similarity=0.204 Sum_probs=25.0
Q ss_pred CCcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 12 FSAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 12 ~ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.-+|.||.++|..|+++|+.|+...+..
T Consensus 8 IG~G~mG~~iA~~la~~G~~V~v~d~~~ 35 (308)
T PRK06129 8 IGAGLIGRAWAIVFARAGHEVRLWDADP 35 (308)
T ss_pred ECccHHHHHHHHHHHHCCCeeEEEeCCH
Confidence 3589999999999999999999988763
No 341
>PLN02206 UDP-glucuronate decarboxylase
Probab=47.91 E-value=78 Score=33.15 Aligned_cols=45 Identities=24% Similarity=0.407 Sum_probs=34.7
Q ss_pred CCCceeec--ccCceeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 141 SGGTTVPM--EHNTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 141 ~G~t~~~l--~~d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
++|...|+ ....-|++=-=.+|-.|..++++++++|++|+.+.+.
T Consensus 106 ~~~~~~~~~~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~ 152 (442)
T PLN02206 106 NSGGKIPLGLKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNF 152 (442)
T ss_pred ccCCcCccccccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCC
Confidence 44555554 3344577777799999999999999999999988653
No 342
>PRK12367 short chain dehydrogenase; Provisional
Probab=47.84 E-value=18 Score=34.44 Aligned_cols=27 Identities=19% Similarity=0.311 Sum_probs=23.3
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.||..|.++|++|+++|+.|+.+.|..
T Consensus 22 as~gIG~ala~~l~~~G~~Vi~~~r~~ 48 (245)
T PRK12367 22 ASGALGKALTKAFRAKGAKVIGLTHSK 48 (245)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEECCc
Confidence 356689999999999999999988763
No 343
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=47.82 E-value=19 Score=33.04 Aligned_cols=28 Identities=18% Similarity=0.224 Sum_probs=24.5
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
.+|.-|.++|+.|+++||.|+.+.|...
T Consensus 13 a~g~iG~~~a~~l~~~G~~V~~~~r~~~ 40 (238)
T PRK05786 13 VSEGLGYAVAYFALKEGAQVCINSRNEN 40 (238)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4688999999999999999999988643
No 344
>PRK07856 short chain dehydrogenase; Provisional
Probab=47.76 E-value=19 Score=33.66 Aligned_cols=27 Identities=22% Similarity=0.273 Sum_probs=23.7
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.||.-|.++|++|+++|+.|+++.|..
T Consensus 14 as~gIG~~la~~l~~~g~~v~~~~r~~ 40 (252)
T PRK07856 14 GTRGIGAGIARAFLAAGATVVVCGRRA 40 (252)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCCh
Confidence 356779999999999999999998864
No 345
>PRK07806 short chain dehydrogenase; Provisional
Probab=47.69 E-value=19 Score=33.34 Aligned_cols=26 Identities=27% Similarity=0.404 Sum_probs=23.1
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|++|+++|+.|+.+.|.
T Consensus 14 asggiG~~l~~~l~~~G~~V~~~~r~ 39 (248)
T PRK07806 14 SSRGIGADTAKILAGAGAHVVVNYRQ 39 (248)
T ss_pred CCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999999999998775
No 346
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=47.63 E-value=19 Score=33.78 Aligned_cols=31 Identities=16% Similarity=0.288 Sum_probs=25.6
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
+|+. +||--|.++|++|+++|+.|+.+.|..
T Consensus 10 lItG-as~~iG~~ia~~l~~~G~~v~~~~r~~ 40 (257)
T PRK07067 10 LLTG-AASGIGEAVAERYLAEGARVVIADIKP 40 (257)
T ss_pred EEeC-CCchHHHHHHHHHHHcCCEEEEEcCCH
Confidence 4555 566779999999999999999988763
No 347
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=47.52 E-value=19 Score=33.89 Aligned_cols=30 Identities=23% Similarity=0.388 Sum_probs=24.3
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+- .||-.|.++|+.|+++||.|+.+.|.
T Consensus 10 lVtG-as~gIG~~ia~~l~~~G~~V~~~~r~ 39 (263)
T PRK06200 10 LITG-GGSGIGRALVERFLAEGARVAVLERS 39 (263)
T ss_pred EEeC-CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3444 35667999999999999999998875
No 348
>PRK07890 short chain dehydrogenase; Provisional
Probab=47.44 E-value=20 Score=33.35 Aligned_cols=26 Identities=15% Similarity=0.115 Sum_probs=23.1
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||--|.++|++|+++|+.|+.+.|.
T Consensus 13 a~~~IG~~la~~l~~~G~~V~~~~r~ 38 (258)
T PRK07890 13 VGPGLGRTLAVRAARAGADVVLAART 38 (258)
T ss_pred CCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 46778999999999999999998775
No 349
>PRK06057 short chain dehydrogenase; Provisional
Probab=47.44 E-value=19 Score=33.69 Aligned_cols=26 Identities=12% Similarity=0.160 Sum_probs=23.1
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|++|+++|+.|+.+.|.
T Consensus 15 asggIG~~~a~~l~~~G~~v~~~~r~ 40 (255)
T PRK06057 15 GGSGIGLATARRLAAEGATVVVGDID 40 (255)
T ss_pred CCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 45778999999999999999998775
No 350
>PRK09186 flagellin modification protein A; Provisional
Probab=47.38 E-value=20 Score=33.42 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=26.0
Q ss_pred eeeeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 6 VRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 6 vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+=.|+.-| |..|.++|+.|+++||.|+.+.|.
T Consensus 6 ~vlItGas-~giG~~~a~~l~~~g~~v~~~~r~ 37 (256)
T PRK09186 6 TILITGAG-GLIGSALVKAILEAGGIVIAADID 37 (256)
T ss_pred EEEEECCC-chHHHHHHHHHHHCCCEEEEEecC
Confidence 34555554 568999999999999999998775
No 351
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=47.12 E-value=19 Score=33.70 Aligned_cols=26 Identities=15% Similarity=0.330 Sum_probs=23.5
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|.||.++|..+.++|+.|++..|.
T Consensus 8 G~G~mG~ala~~L~~~G~~V~v~~r~ 33 (219)
T TIGR01915 8 GTGDQGKGLALRLAKAGNKIIIGSRD 33 (219)
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 37999999999999999999998775
No 352
>PRK06138 short chain dehydrogenase; Provisional
Probab=47.10 E-value=19 Score=33.33 Aligned_cols=30 Identities=20% Similarity=0.360 Sum_probs=25.0
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+-- +|.-|.++|+.|+++|+.|+.+.|.
T Consensus 9 lItG~-sg~iG~~la~~l~~~G~~v~~~~r~ 38 (252)
T PRK06138 9 IVTGA-GSGIGRATAKLFAREGARVVVADRD 38 (252)
T ss_pred EEeCC-CchHHHHHHHHHHHCCCeEEEecCC
Confidence 34443 5788999999999999999999876
No 353
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=47.03 E-value=62 Score=33.79 Aligned_cols=27 Identities=26% Similarity=0.191 Sum_probs=21.1
Q ss_pred EecCCCChhHHH--HHHHHHHCCCEEEEEec
Q psy14323 156 VDNFSAGTRGAS--SVEYFVEQGYAVLFVYS 184 (400)
Q Consensus 156 IdNfSSG~~Gaa--iAe~fl~~G~~Vifl~~ 184 (400)
|+--|+ ..|.+ +|+.| ..|++|+.++.
T Consensus 46 VTGaSs-GIGlA~~IA~al-~~GA~Vi~v~~ 74 (398)
T PRK13656 46 VIGASS-GYGLASRIAAAF-GAGADTLGVFF 74 (398)
T ss_pred EECCCc-hHhHHHHHHHHH-HcCCeEEEEec
Confidence 555555 56777 89999 99999988875
No 354
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=46.95 E-value=32 Score=31.30 Aligned_cols=59 Identities=12% Similarity=0.138 Sum_probs=0.0
Q ss_pred CChh-HHHHHHHHHHCCCEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHHHhhhhcccCCCCceEEEeec
Q psy14323 161 AGTR-GASSVEYFVEQGYAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMVSTCVES 239 (400)
Q Consensus 161 SG~~-GaaiAe~fl~~G~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 239 (400)
.|.| |..+|+++.++|+.|+++++.
T Consensus 52 ~G~~~G~~~a~~L~~~g~~V~v~~r~------------------------------------------------------ 77 (168)
T cd01080 52 RSNIVGKPLAALLLNRNATVTVCHSK------------------------------------------------------ 77 (168)
T ss_pred CcHHHHHHHHHHHhhCCCEEEEEECC------------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcceeeeecccCCccCCCCCCCCCCc
Q psy14323 240 AVHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMPEHKM 287 (400)
Q Consensus 240 ~~~l~dyl~lL~~~~~~l~~~~~~di~i~AAAVSDF~vp~~~~~~~KI 287 (400)
+.++.+++ ..+|++|.|..... .+..+.+.++.+
T Consensus 78 ~~~l~~~l-------------~~aDiVIsat~~~~-ii~~~~~~~~~v 111 (168)
T cd01080 78 TKNLKEHT-------------KQADIVIVAVGKPG-LVKGDMVKPGAV 111 (168)
T ss_pred chhHHHHH-------------hhCCEEEEcCCCCc-eecHHHccCCeE
No 355
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=46.79 E-value=21 Score=33.00 Aligned_cols=26 Identities=15% Similarity=0.166 Sum_probs=22.8
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|.-|.++|++|+.+||.|+++.|+
T Consensus 14 asg~iG~~l~~~l~~~g~~v~~~~~~ 39 (252)
T PRK06077 14 SGRGIGRAIAVRLAKEGSLVVVNAKK 39 (252)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57888999999999999999886654
No 356
>PRK07062 short chain dehydrogenase; Provisional
Probab=46.73 E-value=20 Score=33.74 Aligned_cols=26 Identities=27% Similarity=0.414 Sum_probs=23.3
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|+.|+++|+.|+.+.|.
T Consensus 16 as~giG~~ia~~l~~~G~~V~~~~r~ 41 (265)
T PRK07062 16 GSSGIGLATVELLLEAGASVAICGRD 41 (265)
T ss_pred CCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 45678999999999999999999886
No 357
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=46.71 E-value=20 Score=33.58 Aligned_cols=26 Identities=19% Similarity=0.061 Sum_probs=23.3
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|++|+++|+.|+++.|.
T Consensus 17 as~giG~~ia~~L~~~G~~vvl~~r~ 42 (254)
T PRK08085 17 SAQGIGFLLATGLAEYGAEIIINDIT 42 (254)
T ss_pred CCChHHHHHHHHHHHcCCEEEEEcCC
Confidence 46788999999999999999998876
No 358
>PRK06914 short chain dehydrogenase; Provisional
Probab=46.61 E-value=20 Score=34.02 Aligned_cols=26 Identities=23% Similarity=0.358 Sum_probs=23.4
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||..|.++|+.|+++||.|+.+.|.
T Consensus 11 asg~iG~~la~~l~~~G~~V~~~~r~ 36 (280)
T PRK06914 11 ASSGFGLLTTLELAKKGYLVIATMRN 36 (280)
T ss_pred CCchHHHHHHHHHHhCCCEEEEEeCC
Confidence 56788999999999999999998776
No 359
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=46.59 E-value=28 Score=34.99 Aligned_cols=28 Identities=25% Similarity=0.404 Sum_probs=25.2
Q ss_pred CChhHHHHHHHHHHCCCEEEEEeccCch
Q psy14323 161 AGTRGASSVEYFVEQGYAVLFVYSTCVE 188 (400)
Q Consensus 161 SG~~GaaiAe~fl~~G~~Vifl~~~~~~ 188 (400)
||.-|+-+|+.+++.||+|.=+.|+.+.
T Consensus 11 TGQDGsYLa~lLLekGY~VhGi~Rrss~ 38 (345)
T COG1089 11 TGQDGSYLAELLLEKGYEVHGIKRRSSS 38 (345)
T ss_pred cCCchHHHHHHHHhcCcEEEEEeecccc
Confidence 7999999999999999999999987544
No 360
>PRK05993 short chain dehydrogenase; Provisional
Probab=46.57 E-value=20 Score=34.33 Aligned_cols=26 Identities=19% Similarity=0.301 Sum_probs=23.7
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||..|.++|+.|.++|+.|+.+.|.
T Consensus 12 asggiG~~la~~l~~~G~~Vi~~~r~ 37 (277)
T PRK05993 12 CSSGIGAYCARALQSDGWRVFATCRK 37 (277)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 46889999999999999999999886
No 361
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=46.29 E-value=25 Score=32.35 Aligned_cols=26 Identities=12% Similarity=0.114 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|+++|+.|+.+.|+
T Consensus 13 a~g~iG~~~a~~l~~~G~~V~~~~r~ 38 (238)
T PRK05786 13 VSEGLGYAVAYFALKEGAQVCINSRN 38 (238)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999999999999999998875
No 362
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=46.24 E-value=26 Score=33.09 Aligned_cols=31 Identities=19% Similarity=0.335 Sum_probs=25.4
Q ss_pred eeecCCc-ccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSA-GTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ss-g~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+==|+ +-.|.++|+.|+++|+.|+..+|.
T Consensus 11 lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~ 42 (252)
T PRK06079 11 VVMGVANKRSIAWGCAQAIKDQGATVIYTYQN 42 (252)
T ss_pred EEeCCCCCCchHHHHHHHHHHCCCEEEEecCc
Confidence 4555554 679999999999999999998775
No 363
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=46.20 E-value=38 Score=37.14 Aligned_cols=29 Identities=21% Similarity=0.122 Sum_probs=23.7
Q ss_pred eEEecCCCChhHHHHHHHHHHCCCEEEEE
Q psy14323 154 RFVDNFSAGTRGASSVEYFVEQGYAVLFV 182 (400)
Q Consensus 154 RfIdNfSSG~~GaaiAe~fl~~G~~Vifl 182 (400)
|++=-=++|..|.++++++..+|++|.+.
T Consensus 382 kiLVtGa~G~iG~~l~~~L~~~g~~v~~~ 410 (668)
T PLN02260 382 KFLIYGRTGWIGGLLGKLCEKQGIAYEYG 410 (668)
T ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEee
Confidence 45555579999999999999999998643
No 364
>PRK06197 short chain dehydrogenase; Provisional
Probab=46.14 E-value=21 Score=34.70 Aligned_cols=26 Identities=19% Similarity=0.287 Sum_probs=23.2
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|.-|.++|+.|+++|+.|+.+.|.
T Consensus 24 as~gIG~~~a~~l~~~G~~vi~~~r~ 49 (306)
T PRK06197 24 ANTGLGYETAAALAAKGAHVVLAVRN 49 (306)
T ss_pred CCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 46788999999999999999998875
No 365
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=46.05 E-value=21 Score=34.13 Aligned_cols=27 Identities=7% Similarity=0.142 Sum_probs=25.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.||..|..++++++++|++|+.+.|+.
T Consensus 7 atG~iG~~vv~~L~~~g~~V~~~~R~~ 33 (285)
T TIGR03649 7 GTGKTASRIARLLQAASVPFLVASRSS 33 (285)
T ss_pred CCChHHHHHHHHHHhCCCcEEEEeCCC
Confidence 689999999999999999999999864
No 366
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=45.99 E-value=21 Score=33.52 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=25.4
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+. .+|.-|.++|+.|+++|+.|+.+.|.
T Consensus 16 lItG-a~g~IG~~la~~l~~~G~~V~~~~r~ 45 (259)
T PRK08213 16 LVTG-GSRGLGLQIAEALGEAGARVVLSARK 45 (259)
T ss_pred EEEC-CCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 4444 46788999999999999999999886
No 367
>PRK08251 short chain dehydrogenase; Provisional
Probab=45.91 E-value=21 Score=33.09 Aligned_cols=30 Identities=17% Similarity=0.325 Sum_probs=25.3
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+- .||..|.++|+.|+++|+.|+++.|.
T Consensus 6 lItG-as~giG~~la~~l~~~g~~v~~~~r~ 35 (248)
T PRK08251 6 LITG-ASSGLGAGMAREFAAKGRDLALCARR 35 (248)
T ss_pred EEEC-CCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 3444 57889999999999999999999876
No 368
>PRK08703 short chain dehydrogenase; Provisional
Probab=45.85 E-value=22 Score=32.86 Aligned_cols=26 Identities=19% Similarity=0.362 Sum_probs=24.0
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|..|.++|+.|+++|+.|+.+.|.
T Consensus 14 ~sggiG~~la~~l~~~g~~V~~~~r~ 39 (239)
T PRK08703 14 ASQGLGEQVAKAYAAAGATVILVARH 39 (239)
T ss_pred CCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 57889999999999999999998876
No 369
>PRK07069 short chain dehydrogenase; Validated
Probab=45.76 E-value=21 Score=33.01 Aligned_cols=25 Identities=32% Similarity=0.371 Sum_probs=22.5
Q ss_pred cccchHHHHHHHHHCCCeEEEEeec
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|-.|.++|+.|+++||.|+.+.|.
T Consensus 8 ~~~iG~~~a~~l~~~G~~v~~~~r~ 32 (251)
T PRK07069 8 AGGLGRAIARRMAEQGAKVFLTDIN 32 (251)
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5668999999999999999998876
No 370
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=45.72 E-value=23 Score=32.82 Aligned_cols=26 Identities=15% Similarity=0.270 Sum_probs=23.0
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||..|.++|+.|+++|+.|++++++
T Consensus 10 as~giG~~la~~l~~~g~~v~~~~~~ 35 (248)
T PRK06947 10 ASRGIGRATAVLAAARGWSVGINYAR 35 (248)
T ss_pred CCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999999999987765
No 371
>PLN00016 RNA-binding protein; Provisional
Probab=45.64 E-value=19 Score=36.37 Aligned_cols=27 Identities=15% Similarity=0.044 Sum_probs=24.9
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
.||..|..+++++++.||+|+.+.|..
T Consensus 64 atG~iG~~lv~~L~~~G~~V~~l~R~~ 90 (378)
T PLN00016 64 GHAFIGFYLAKELVKAGHEVTLFTRGK 90 (378)
T ss_pred CceeEhHHHHHHHHHCCCEEEEEecCC
Confidence 678999999999999999999999864
No 372
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=45.62 E-value=21 Score=34.78 Aligned_cols=29 Identities=21% Similarity=0.245 Sum_probs=25.3
Q ss_pred CCcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 12 FSAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 12 ~ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
=.||.-|++++++|+++||.|+.+.|..+
T Consensus 12 GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 40 (322)
T PLN02986 12 GASGYIASWIVKLLLLRGYTVKATVRDLT 40 (322)
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 35899999999999999999998888644
No 373
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=45.51 E-value=23 Score=34.88 Aligned_cols=29 Identities=28% Similarity=0.449 Sum_probs=25.5
Q ss_pred CCcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 12 FSAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 12 ~ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
=.||-.|.+++++|+.+||.|+.+.|..+
T Consensus 13 GatGfiG~~l~~~L~~~G~~V~~~~r~~~ 41 (340)
T PLN02653 13 GITGQDGSYLTEFLLSKGYEVHGIIRRSS 41 (340)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence 35899999999999999999999988643
No 374
>PRK08264 short chain dehydrogenase; Validated
Probab=45.24 E-value=19 Score=33.21 Aligned_cols=28 Identities=21% Similarity=0.245 Sum_probs=24.8
Q ss_pred CcccchHHHHHHHHHCCC-eEEEEeecCC
Q psy14323 13 SAGTRGASSVEYFVEQGY-AVLFVYRNNS 40 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~-~v~~~~~~~~ 40 (400)
.||.-|.++|+.|+++|+ .|+.+.|..+
T Consensus 14 gsg~iG~~la~~l~~~G~~~V~~~~r~~~ 42 (238)
T PRK08264 14 ANRGIGRAFVEQLLARGAAKVYAAARDPE 42 (238)
T ss_pred CCchHHHHHHHHHHHCCcccEEEEecChh
Confidence 478899999999999999 9999988744
No 375
>PRK12746 short chain dehydrogenase; Provisional
Probab=45.22 E-value=22 Score=33.07 Aligned_cols=28 Identities=18% Similarity=0.254 Sum_probs=23.2
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEe
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVY 36 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~ 36 (400)
+|+- .||.-|.++|++|+++|+.|+.+.
T Consensus 10 lItG-asg~iG~~la~~l~~~G~~v~i~~ 37 (254)
T PRK12746 10 LVTG-ASRGIGRAIAMRLANDGALVAIHY 37 (254)
T ss_pred EEeC-CCchHHHHHHHHHHHCCCEEEEEc
Confidence 4444 578899999999999999998764
No 376
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=45.18 E-value=28 Score=34.17 Aligned_cols=35 Identities=29% Similarity=0.305 Sum_probs=29.0
Q ss_pred ceeEEecCCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 152 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 152 ~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
+++-|.--=.|+||..+|..|+..|+.|+++-...
T Consensus 4 ~~~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~ 38 (286)
T PRK07819 4 AIQRVGVVGAGQMGAGIAEVCARAGVDVLVFETTE 38 (286)
T ss_pred CccEEEEEcccHHHHHHHHHHHhCCCEEEEEECCH
Confidence 44455556789999999999999999999998753
No 377
>PLN02780 ketoreductase/ oxidoreductase
Probab=45.12 E-value=19 Score=35.74 Aligned_cols=26 Identities=19% Similarity=0.277 Sum_probs=22.8
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|++|+++|+.|+++.|.
T Consensus 61 As~GIG~alA~~La~~G~~Vil~~R~ 86 (320)
T PLN02780 61 PTDGIGKGFAFQLARKGLNLVLVARN 86 (320)
T ss_pred CCcHHHHHHHHHHHHCCCCEEEEECC
Confidence 35567999999999999999999886
No 378
>PRK06194 hypothetical protein; Provisional
Probab=45.01 E-value=21 Score=34.05 Aligned_cols=26 Identities=12% Similarity=0.054 Sum_probs=22.7
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|--|.++|++|+++|+.|+++.|.
T Consensus 14 asggIG~~la~~l~~~G~~V~~~~r~ 39 (287)
T PRK06194 14 AASGFGLAFARIGAALGMKLVLADVQ 39 (287)
T ss_pred CccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35677999999999999999998775
No 379
>PRK12937 short chain dehydrogenase; Provisional
Probab=44.88 E-value=23 Score=32.68 Aligned_cols=25 Identities=24% Similarity=0.380 Sum_probs=22.5
Q ss_pred cccchHHHHHHHHHCCCeEEEEeec
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|.-|.++|++|+++|+.|+++.|+
T Consensus 14 ~~~iG~~la~~l~~~g~~v~~~~~~ 38 (245)
T PRK12937 14 SRGIGAAIARRLAADGFAVAVNYAG 38 (245)
T ss_pred CchHHHHHHHHHHHCCCEEEEecCC
Confidence 5778999999999999999988775
No 380
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=44.75 E-value=62 Score=29.36 Aligned_cols=27 Identities=15% Similarity=0.190 Sum_probs=21.5
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
-|+.-|.-+|..+..+|+.|+..|...
T Consensus 44 rs~~VG~Pla~lL~~~~atVt~~h~~T 70 (160)
T PF02882_consen 44 RSNIVGKPLAMLLLNKGATVTICHSKT 70 (160)
T ss_dssp TTTTTHHHHHHHHHHTT-EEEEE-TTS
T ss_pred CcCCCChHHHHHHHhCCCeEEeccCCC
Confidence 466789999999999999999999763
No 381
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=44.74 E-value=74 Score=29.18 Aligned_cols=25 Identities=24% Similarity=0.315 Sum_probs=19.3
Q ss_pred CCChhHHHHHHHHHHCC--CEEEEEec
Q psy14323 160 SAGTRGASSVEYFVEQG--YAVLFVYS 184 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G--~~Vifl~~ 184 (400)
+||.-|.++|++|+++| +.|+...+
T Consensus 8 as~gIG~~ia~~l~~~~~~~~v~~~~~ 34 (235)
T PRK09009 8 GSGGIGKAMVKQLLERYPDATVHATYR 34 (235)
T ss_pred CCChHHHHHHHHHHHhCCCCEEEEEcc
Confidence 57889999999999996 45554444
No 382
>PRK07035 short chain dehydrogenase; Provisional
Probab=44.64 E-value=23 Score=33.02 Aligned_cols=30 Identities=20% Similarity=0.331 Sum_probs=24.4
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+- .||.-|.++|++|+++||.|+.+.|.
T Consensus 12 lItG-as~gIG~~l~~~l~~~G~~Vi~~~r~ 41 (252)
T PRK07035 12 LVTG-ASRGIGEAIAKLLAQQGAHVIVSSRK 41 (252)
T ss_pred EEEC-CCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3443 34667999999999999999999875
No 383
>PRK05884 short chain dehydrogenase; Provisional
Probab=44.57 E-value=27 Score=32.38 Aligned_cols=26 Identities=23% Similarity=0.225 Sum_probs=23.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|..|.++|+.|+++|+.|+.+.|.
T Consensus 8 as~giG~~ia~~l~~~g~~v~~~~r~ 33 (223)
T PRK05884 8 GDTDLGRTIAEGFRNDGHKVTLVGAR 33 (223)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 45779999999999999999998775
No 384
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=44.48 E-value=23 Score=33.17 Aligned_cols=26 Identities=31% Similarity=0.295 Sum_probs=23.4
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|.-|.++|++|+++||.|+.+.|.
T Consensus 10 ~~~~IG~~la~~l~~~g~~vi~~~r~ 35 (259)
T PRK12384 10 GGQTLGAFLCHGLAEEGYRVAVADIN 35 (259)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 46788999999999999999999875
No 385
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=44.47 E-value=29 Score=33.27 Aligned_cols=31 Identities=16% Similarity=0.282 Sum_probs=25.2
Q ss_pred eeecCCc-ccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSA-GTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ss-g~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+--|+ +-.|.++|+.|+++|+.|++.+|.
T Consensus 10 lITGas~~~GIG~aia~~la~~G~~vil~~r~ 41 (262)
T PRK07984 10 LVTGVASKLSIAYGIAQAMHREGAELAFTYQN 41 (262)
T ss_pred EEeCCCCCccHHHHHHHHHHHCCCEEEEEecc
Confidence 4566665 378999999999999999987664
No 386
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=44.46 E-value=22 Score=32.98 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=26.2
Q ss_pred ceeeeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 5 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 5 ~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+-+|+. .||..|.++|++|+++|+.|+.+.++
T Consensus 7 ~~~lItG-~s~~iG~~la~~l~~~g~~v~~~~~~ 39 (247)
T PRK12935 7 KVAIVTG-GAKGIGKAITVALAQEGAKVVINYNS 39 (247)
T ss_pred CEEEEEC-CCCHHHHHHHHHHHHcCCEEEEEcCC
Confidence 3445665 36788999999999999999987664
No 387
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=44.45 E-value=25 Score=32.28 Aligned_cols=27 Identities=26% Similarity=0.316 Sum_probs=23.4
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.||.-|.++|+.|+++|+.|+.+.|..
T Consensus 13 as~~iG~~ia~~l~~~G~~v~~~~r~~ 39 (235)
T PRK06550 13 AASGIGLAQARAFLAQGAQVYGVDKQD 39 (235)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCCc
Confidence 356779999999999999999988764
No 388
>PRK08263 short chain dehydrogenase; Provisional
Probab=44.44 E-value=22 Score=33.85 Aligned_cols=30 Identities=23% Similarity=0.313 Sum_probs=25.4
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+- .||..|.++|++|+++|+.|+.+.|.
T Consensus 7 lItG-asg~iG~~~a~~l~~~g~~V~~~~r~ 36 (275)
T PRK08263 7 FITG-ASRGFGRAWTEAALERGDRVVATARD 36 (275)
T ss_pred EEeC-CCChHHHHHHHHHHHCCCEEEEEECC
Confidence 3443 57889999999999999999999886
No 389
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=44.42 E-value=22 Score=34.46 Aligned_cols=27 Identities=26% Similarity=0.362 Sum_probs=23.5
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.+|--|+.+|+.|+++|+.|+.+.|+.
T Consensus 7 a~GfiG~~l~~~L~~~g~~~v~~~~~~ 33 (308)
T PRK11150 7 GAGFIGSNIVKALNDKGITDILVVDNL 33 (308)
T ss_pred CCcHHHHHHHHHHHhCCCceEEEecCC
Confidence 479999999999999999888877653
No 390
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=44.23 E-value=24 Score=32.87 Aligned_cols=30 Identities=13% Similarity=0.192 Sum_probs=25.3
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+- .||.-|.++|+.|+++|+.|+.+.|.
T Consensus 6 lItG-~sg~iG~~la~~L~~~g~~vi~~~r~ 35 (256)
T PRK12745 6 LVTG-GRRGIGLGIARALAAAGFDLAINDRP 35 (256)
T ss_pred EEeC-CCchHHHHHHHHHHHCCCEEEEEecC
Confidence 3444 47889999999999999999998876
No 391
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=44.18 E-value=30 Score=32.86 Aligned_cols=31 Identities=10% Similarity=0.279 Sum_probs=25.5
Q ss_pred eeecCCcc-cchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAG-TRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg-~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+==|+| -.|.++|+.|+++||.|++..|.
T Consensus 12 lITGas~~~GIG~a~a~~la~~G~~v~~~~r~ 43 (260)
T PRK06603 12 LITGIANNMSISWAIAQLAKKHGAELWFTYQS 43 (260)
T ss_pred EEECCCCCcchHHHHHHHHHHcCCEEEEEeCc
Confidence 56666665 48999999999999999987664
No 392
>PRK06444 prephenate dehydrogenase; Provisional
Probab=44.03 E-value=22 Score=33.32 Aligned_cols=22 Identities=18% Similarity=0.311 Sum_probs=20.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEE
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLF 181 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vif 181 (400)
.+|+||..++++|.+.||.|.+
T Consensus 8 ~~G~mG~~~~~~~~~~g~~v~~ 29 (197)
T PRK06444 8 KNGRLGRVLCSILDDNGLGVYI 29 (197)
T ss_pred cCCcHHHHHHHHHHhCCCEEEE
Confidence 5799999999999999999974
No 393
>PRK06398 aldose dehydrogenase; Validated
Probab=43.96 E-value=24 Score=33.41 Aligned_cols=27 Identities=19% Similarity=0.193 Sum_probs=23.6
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.+|.-|.++|+.|+++||.|+.+.|..
T Consensus 14 as~gIG~~ia~~l~~~G~~Vi~~~r~~ 40 (258)
T PRK06398 14 GSQGIGKAVVNRLKEEGSNVINFDIKE 40 (258)
T ss_pred CCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence 467789999999999999999988763
No 394
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=43.95 E-value=23 Score=33.11 Aligned_cols=30 Identities=30% Similarity=0.242 Sum_probs=25.0
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+. .+|.-|.++|+.|+++|+.|+.+.|.
T Consensus 15 lItG-as~~IG~~la~~l~~~G~~v~~~~r~ 44 (256)
T PRK06124 15 LVTG-SARGLGFEIARALAGAGAHVLVNGRN 44 (256)
T ss_pred EEEC-CCchHHHHHHHHHHHcCCeEEEEeCC
Confidence 4444 35667999999999999999999886
No 395
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=43.90 E-value=22 Score=33.45 Aligned_cols=30 Identities=10% Similarity=0.032 Sum_probs=24.2
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+- .||.-|.++|+.|+++||.|+.+.|.
T Consensus 12 lItG-as~gIG~aia~~l~~~G~~vv~~~~~ 41 (251)
T PRK12481 12 IITG-CNTGLGQGMAIGLAKAGADIVGVGVA 41 (251)
T ss_pred EEeC-CCchHHHHHHHHHHHCCCEEEEecCc
Confidence 3444 45678999999999999999988764
No 396
>PRK07024 short chain dehydrogenase; Provisional
Probab=43.70 E-value=24 Score=33.21 Aligned_cols=26 Identities=19% Similarity=0.273 Sum_probs=23.5
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+||.-|.++|+.|+++|+.|+++.|.
T Consensus 10 as~gIG~~la~~l~~~G~~v~~~~r~ 35 (257)
T PRK07024 10 ASSGIGQALAREYARQGATLGLVARR 35 (257)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46788999999999999999999876
No 397
>PRK06180 short chain dehydrogenase; Provisional
Probab=43.69 E-value=23 Score=33.87 Aligned_cols=25 Identities=16% Similarity=0.127 Sum_probs=22.8
Q ss_pred cccchHHHHHHHHHCCCeEEEEeec
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
||..|.++|+.|+++|+.|+.+.|.
T Consensus 13 sggiG~~la~~l~~~G~~V~~~~r~ 37 (277)
T PRK06180 13 SSGFGRALAQAALAAGHRVVGTVRS 37 (277)
T ss_pred CChHHHHHHHHHHhCcCEEEEEeCC
Confidence 5678999999999999999999886
No 398
>PRK12939 short chain dehydrogenase; Provisional
Probab=43.68 E-value=24 Score=32.50 Aligned_cols=31 Identities=29% Similarity=0.259 Sum_probs=25.3
Q ss_pred eeeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 7 RFVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 7 r~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
-+|+. .+|.-|.++|+.|+++|+.|+.+.|.
T Consensus 10 vlItG-a~g~iG~~la~~l~~~G~~v~~~~r~ 40 (250)
T PRK12939 10 ALVTG-AARGLGAAFAEALAEAGATVAFNDGL 40 (250)
T ss_pred EEEeC-CCChHHHHHHHHHHHcCCEEEEEeCC
Confidence 34554 36789999999999999999998665
No 399
>PRK08303 short chain dehydrogenase; Provisional
Probab=43.67 E-value=36 Score=33.48 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=27.0
Q ss_pred ceeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 152 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 152 ~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+=.||--|+| .|.++|+.|++.|+.|++++|.
T Consensus 9 k~~lITGgs~G-IG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 9 KVALVAGATRG-AGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CEEEEeCCCch-HHHHHHHHHHHCCCEEEEEecc
Confidence 44466665554 9999999999999999998875
No 400
>PRK08303 short chain dehydrogenase; Provisional
Probab=43.59 E-value=23 Score=34.87 Aligned_cols=31 Identities=16% Similarity=0.127 Sum_probs=25.4
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
+|+-=|+ .-|.++|++|++.|+.|++++|..
T Consensus 12 lITGgs~-GIG~aia~~la~~G~~Vv~~~r~~ 42 (305)
T PRK08303 12 LVAGATR-GAGRGIAVELGAAGATVYVTGRST 42 (305)
T ss_pred EEeCCCc-hHHHHHHHHHHHCCCEEEEEeccc
Confidence 5555444 489999999999999999998863
No 401
>PRK08267 short chain dehydrogenase; Provisional
Probab=43.57 E-value=23 Score=33.18 Aligned_cols=26 Identities=23% Similarity=0.250 Sum_probs=23.2
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||..|.++|++|+++|+.|+.+.|.
T Consensus 9 asg~iG~~la~~l~~~G~~V~~~~r~ 34 (260)
T PRK08267 9 AASGIGRATALLFAAEGWRVGAYDIN 34 (260)
T ss_pred CCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 36788999999999999999999875
No 402
>PRK05717 oxidoreductase; Validated
Probab=43.49 E-value=23 Score=33.24 Aligned_cols=26 Identities=15% Similarity=0.373 Sum_probs=22.7
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|.-|.++|++|+++|+.|+++.|.
T Consensus 18 ~sg~IG~~~a~~l~~~g~~v~~~~~~ 43 (255)
T PRK05717 18 AARGIGLGIAAWLIAEGWQVVLADLD 43 (255)
T ss_pred CcchHHHHHHHHHHHcCCEEEEEcCC
Confidence 35778999999999999999998664
No 403
>PRK07576 short chain dehydrogenase; Provisional
Probab=43.47 E-value=23 Score=33.58 Aligned_cols=26 Identities=15% Similarity=0.166 Sum_probs=23.8
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|+.|+.+|+.|+.+.|.
T Consensus 17 asggIG~~la~~l~~~G~~V~~~~r~ 42 (264)
T PRK07576 17 GTSGINLGIAQAFARAGANVAVASRS 42 (264)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 56788999999999999999999886
No 404
>PRK12743 oxidoreductase; Provisional
Probab=43.44 E-value=25 Score=33.00 Aligned_cols=30 Identities=17% Similarity=0.344 Sum_probs=24.2
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+- .||--|.++|+.|+++|+.|+++.++
T Consensus 6 lItG-as~giG~~~a~~l~~~G~~V~~~~~~ 35 (256)
T PRK12743 6 IVTA-SDSGIGKACALLLAQQGFDIGITWHS 35 (256)
T ss_pred EEEC-CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3444 35668999999999999999988765
No 405
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=43.34 E-value=29 Score=32.52 Aligned_cols=31 Identities=23% Similarity=0.411 Sum_probs=26.3
Q ss_pred eeecCCc-ccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSA-GTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ss-g~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+-=|+ |--|.++|+.|+++||.|+.+.|.
T Consensus 9 lItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 9 LVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred EEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 5666554 689999999999999999998875
No 406
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=43.32 E-value=24 Score=32.20 Aligned_cols=27 Identities=22% Similarity=0.314 Sum_probs=23.3
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.||.-|.++|++|+++|+.|+.+.|..
T Consensus 14 asg~iG~~l~~~l~~~g~~v~~~~~~~ 40 (249)
T PRK12825 14 AARGLGRAIALRLARAGADVVVHYRSD 40 (249)
T ss_pred CCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence 478899999999999999998866663
No 407
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=43.24 E-value=23 Score=32.59 Aligned_cols=26 Identities=12% Similarity=0.324 Sum_probs=22.5
Q ss_pred cccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
||--|.++|++|+++|+.|+.+.|+.
T Consensus 7 s~giG~~~a~~l~~~G~~v~~~~~~~ 32 (239)
T TIGR01831 7 SRGIGRAIANRLAADGFEICVHYHSG 32 (239)
T ss_pred CchHHHHHHHHHHHCCCEEEEEeCCC
Confidence 45569999999999999999988763
No 408
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=43.21 E-value=24 Score=34.80 Aligned_cols=26 Identities=23% Similarity=0.212 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
=.|.||.++|..++.+|+.|+.+.+.
T Consensus 9 G~G~mG~~iA~~la~~G~~V~v~d~~ 34 (308)
T PRK06129 9 GAGLIGRAWAIVFARAGHEVRLWDAD 34 (308)
T ss_pred CccHHHHHHHHHHHHCCCeeEEEeCC
Confidence 38999999999999999999988775
No 409
>PRK05866 short chain dehydrogenase; Provisional
Probab=43.14 E-value=23 Score=34.46 Aligned_cols=25 Identities=28% Similarity=0.426 Sum_probs=22.7
Q ss_pred cccchHHHHHHHHHCCCeEEEEeec
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
||.-|.++|+.|+++|+.|+.+.|.
T Consensus 49 sggIG~~la~~La~~G~~Vi~~~R~ 73 (293)
T PRK05866 49 SSGIGEAAAEQFARRGATVVAVARR 73 (293)
T ss_pred CcHHHHHHHHHHHHCCCEEEEEECC
Confidence 5667999999999999999999886
No 410
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=43.04 E-value=43 Score=33.51 Aligned_cols=25 Identities=16% Similarity=0.313 Sum_probs=19.3
Q ss_pred CChhHHHHHHHHHHCCC-EEEEEecc
Q psy14323 161 AGTRGASSVEYFVEQGY-AVLFVYST 185 (400)
Q Consensus 161 SG~~GaaiAe~fl~~G~-~Vifl~~~ 185 (400)
+|.-|+++++++++.|- .++++.+.
T Consensus 7 ~GSIGseL~rql~~~~p~~lil~d~~ 32 (293)
T PF02719_consen 7 GGSIGSELVRQLLRYGPKKLILFDRD 32 (293)
T ss_dssp TSHHHHHHHHHHHCCB-SEEEEEES-
T ss_pred ccHHHHHHHHHHHhcCCCeEEEeCCC
Confidence 68999999999999996 46666554
No 411
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=42.85 E-value=26 Score=32.47 Aligned_cols=26 Identities=23% Similarity=0.373 Sum_probs=22.6
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||-.|.++|+.|+++||.|+.+.++
T Consensus 13 as~gIG~~la~~l~~~G~~vv~~~~~ 38 (253)
T PRK08642 13 GSRGLGAAIARAFAREGARVVVNYHQ 38 (253)
T ss_pred CCCcHHHHHHHHHHHCCCeEEEEcCC
Confidence 46788999999999999999987654
No 412
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=42.68 E-value=75 Score=31.30 Aligned_cols=77 Identities=10% Similarity=-0.009 Sum_probs=0.0
Q ss_pred CChhHHHHHHHHHHCCCEEEEEeccCchhhhhHHHHHHHHHHHhhhhhcCCchhHHHHHHhhhhcccCCCCceEEEeecH
Q psy14323 161 AGTRGASSVEYFVEQGYAVLFVYSTCVESAIHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVADFYIPADQMVSTCVESA 240 (400)
Q Consensus 161 SG~~GaaiAe~fl~~G~~Vifl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 240 (400)
+|..|..+++.++++|+.++.......... .......-.....-......+.+.
T Consensus 9 tG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~Dl~d~ 62 (352)
T PRK10084 9 AGFIGSAVVRHIINNTQDSVVNVDKLTYAG--------------------------NLESLADVSDSERYVFEHADICDR 62 (352)
T ss_pred CcHHhHHHHHHHHHhCCCeEEEecCCCccc--------------------------hHHHHHhcccCCceEEEEecCCCH
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceeeeecccCC
Q psy14323 241 VHLAEYLWLLRTVCESLQDGGNRVLLYLAAAVAD 274 (400)
Q Consensus 241 ~~l~dyl~lL~~~~~~l~~~~~~di~i~AAAVSD 274 (400)
+++.+.+ .....|++||+||.+.
T Consensus 63 ~~~~~~~-----------~~~~~d~vih~A~~~~ 85 (352)
T PRK10084 63 AELDRIF-----------AQHQPDAVMHLAAESH 85 (352)
T ss_pred HHHHHHH-----------HhcCCCEEEECCcccC
No 413
>PRK08017 oxidoreductase; Provisional
Probab=42.50 E-value=25 Score=32.66 Aligned_cols=26 Identities=23% Similarity=0.317 Sum_probs=23.6
Q ss_pred cccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
||..|.++|+.|+++|+.|+.+.|..
T Consensus 11 sg~IG~~la~~l~~~g~~v~~~~r~~ 36 (256)
T PRK08017 11 SSGIGLEAALELKRRGYRVLAACRKP 36 (256)
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 68899999999999999999988863
No 414
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=42.36 E-value=25 Score=33.34 Aligned_cols=30 Identities=20% Similarity=0.287 Sum_probs=24.4
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+.- +|-.|.++|+.|+++|+.|+++.|.
T Consensus 14 lVtGa-s~giG~~ia~~l~~~G~~V~~~~r~ 43 (278)
T PRK08277 14 VITGG-GGVLGGAMAKELARAGAKVAILDRN 43 (278)
T ss_pred EEeCC-CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 34443 4668999999999999999998876
No 415
>PLN02253 xanthoxin dehydrogenase
Probab=42.10 E-value=26 Score=33.31 Aligned_cols=26 Identities=31% Similarity=0.289 Sum_probs=22.6
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|.-|.++|++|+++|+.|+++.|.
T Consensus 26 as~gIG~~la~~l~~~G~~v~~~~~~ 51 (280)
T PLN02253 26 GATGIGESIVRLFHKHGAKVCIVDLQ 51 (280)
T ss_pred CCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 35667999999999999999998765
No 416
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=42.05 E-value=29 Score=32.70 Aligned_cols=32 Identities=16% Similarity=0.183 Sum_probs=25.8
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
+|+- .+|..|.++|+.|+++|+.|+.+.+...
T Consensus 13 lItG-~s~gIG~~la~~l~~~G~~v~~~~~~~~ 44 (266)
T PRK06171 13 IVTG-GSSGIGLAIVKELLANGANVVNADIHGG 44 (266)
T ss_pred EEeC-CCChHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4444 4577899999999999999999887643
No 417
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=42.03 E-value=28 Score=32.64 Aligned_cols=30 Identities=20% Similarity=0.348 Sum_probs=24.2
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+.- ||--|.++|+.|+++|+.|+.+.|+
T Consensus 11 lItGa-s~gIG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T PRK06463 11 LITGG-TRGIGRAIAEAFLREGAKVAVLYNS 40 (255)
T ss_pred EEeCC-CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 44444 5678999999999999999987665
No 418
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=42.03 E-value=30 Score=32.33 Aligned_cols=26 Identities=12% Similarity=0.239 Sum_probs=23.2
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+|.||.++|..+.+.|++|++..+.
T Consensus 8 G~G~mG~ala~~L~~~G~~V~v~~r~ 33 (219)
T TIGR01915 8 GTGDQGKGLALRLAKAGNKIIIGSRD 33 (219)
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 37999999999999999999988664
No 419
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=41.98 E-value=27 Score=32.81 Aligned_cols=26 Identities=19% Similarity=0.252 Sum_probs=22.5
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|..|.++|+.|+++|+.|++..|.
T Consensus 15 a~~gIG~~ia~~l~~~G~~vvi~~~~ 40 (261)
T PRK08936 15 GSTGLGRAMAVRFGKEKAKVVINYRS 40 (261)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 35667999999999999999988775
No 420
>PRK08589 short chain dehydrogenase; Validated
Probab=41.95 E-value=26 Score=33.38 Aligned_cols=30 Identities=23% Similarity=0.163 Sum_probs=23.9
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+-=| |.-|.++|+.|+++|+.|+.+.|.
T Consensus 10 lItGas-~gIG~aia~~l~~~G~~vi~~~r~ 39 (272)
T PRK08589 10 VITGAS-TGIGQASAIALAQEGAYVLAVDIA 39 (272)
T ss_pred EEECCC-chHHHHHHHHHHHCCCEEEEEeCc
Confidence 344444 456999999999999999998775
No 421
>KOG0409|consensus
Probab=41.93 E-value=28 Score=35.10 Aligned_cols=32 Identities=25% Similarity=0.492 Sum_probs=27.0
Q ss_pred CceeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 151 NTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 151 d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
..|-||- -|.||..+|..+++.||.|+...+.
T Consensus 36 ~~iGFIG---LG~MG~~M~~nLik~G~kVtV~dr~ 67 (327)
T KOG0409|consen 36 TRIGFIG---LGNMGSAMVSNLIKAGYKVTVYDRT 67 (327)
T ss_pred ceeeEEe---eccchHHHHHHHHHcCCEEEEEeCc
Confidence 4455654 6999999999999999999998875
No 422
>PRK06172 short chain dehydrogenase; Provisional
Probab=41.81 E-value=26 Score=32.66 Aligned_cols=27 Identities=22% Similarity=0.321 Sum_probs=24.0
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.+|..|.++|+.|+++|+.|+.+.|..
T Consensus 15 as~~iG~~ia~~l~~~G~~v~~~~r~~ 41 (253)
T PRK06172 15 GAAGIGRATALAFAREGAKVVVADRDA 41 (253)
T ss_pred CCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 467889999999999999999998864
No 423
>PRK06128 oxidoreductase; Provisional
Probab=41.67 E-value=28 Score=33.86 Aligned_cols=26 Identities=15% Similarity=0.273 Sum_probs=22.6
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|.-|.++|+.|+++||.|++.++.
T Consensus 63 as~gIG~~~a~~l~~~G~~V~i~~~~ 88 (300)
T PRK06128 63 ADSGIGRATAIAFAREGADIALNYLP 88 (300)
T ss_pred CCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 46778999999999999999987764
No 424
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=41.60 E-value=26 Score=32.98 Aligned_cols=29 Identities=28% Similarity=0.362 Sum_probs=25.1
Q ss_pred CCcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 12 FSAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 12 ~ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
=.||..|.+++++|+.+||.|+.+.|..+
T Consensus 24 GasG~iG~~l~~~L~~~g~~V~~~~R~~~ 52 (251)
T PLN00141 24 GATGRTGKRIVEQLLAKGFAVKAGVRDVD 52 (251)
T ss_pred CCCcHHHHHHHHHHHhCCCEEEEEecCHH
Confidence 35899999999999999999998887643
No 425
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=41.58 E-value=28 Score=34.57 Aligned_cols=28 Identities=18% Similarity=0.180 Sum_probs=24.9
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
.+|--|.++|+.|+++|+.|+.+.|...
T Consensus 12 atG~IG~~l~~~L~~~G~~V~~~~r~~~ 39 (349)
T TIGR02622 12 HTGFKGSWLSLWLLELGAEVYGYSLDPP 39 (349)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCc
Confidence 5788999999999999999999887643
No 426
>PRK08278 short chain dehydrogenase; Provisional
Probab=41.57 E-value=26 Score=33.43 Aligned_cols=31 Identities=10% Similarity=0.162 Sum_probs=24.8
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.|+-= ||--|.++|+.|+++|+.|+.+.|..
T Consensus 10 lItGa-s~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (273)
T PRK08278 10 FITGA-SRGIGLAIALRAARDGANIVIAAKTA 40 (273)
T ss_pred EEECC-CchHHHHHHHHHHHCCCEEEEEeccc
Confidence 34443 45669999999999999999998864
No 427
>PRK06949 short chain dehydrogenase; Provisional
Probab=41.47 E-value=27 Score=32.54 Aligned_cols=27 Identities=19% Similarity=0.271 Sum_probs=24.2
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.+|.-|.++|+.|+++|+.|+.+.|..
T Consensus 17 asg~IG~~~a~~l~~~G~~Vi~~~r~~ 43 (258)
T PRK06949 17 ASSGLGARFAQVLAQAGAKVVLASRRV 43 (258)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 578899999999999999999998863
No 428
>PRK07825 short chain dehydrogenase; Provisional
Probab=41.41 E-value=27 Score=33.04 Aligned_cols=26 Identities=15% Similarity=0.079 Sum_probs=22.9
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|++|+++|+.|+...|.
T Consensus 13 asggiG~~la~~l~~~G~~v~~~~r~ 38 (273)
T PRK07825 13 GARGIGLATARALAALGARVAIGDLD 38 (273)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEECC
Confidence 35778999999999999999998775
No 429
>PRK05854 short chain dehydrogenase; Provisional
Probab=41.37 E-value=27 Score=34.39 Aligned_cols=30 Identities=20% Similarity=0.246 Sum_probs=24.1
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+-= ||..|.++|++|+++|+.|+++.|.
T Consensus 18 lITGa-s~GIG~~~a~~La~~G~~Vil~~R~ 47 (313)
T PRK05854 18 VVTGA-SDGLGLGLARRLAAAGAEVILPVRN 47 (313)
T ss_pred EEeCC-CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 34433 4567999999999999999998875
No 430
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.29 E-value=26 Score=35.02 Aligned_cols=25 Identities=8% Similarity=0.118 Sum_probs=23.3
Q ss_pred cccchHHHHHHHHHCCCeEEEEeec
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
||.||..+|..|+++||.|+..|.+
T Consensus 167 s~~mG~PmA~~L~~~g~tVtv~~~r 191 (296)
T PRK14188 167 SNLVGKPMAQLLLAANATVTIAHSR 191 (296)
T ss_pred CcchHHHHHHHHHhCCCEEEEECCC
Confidence 8999999999999999999999855
No 431
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=41.14 E-value=26 Score=32.44 Aligned_cols=31 Identities=26% Similarity=0.183 Sum_probs=24.9
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
+|+.- +|.-|.++|+.|+++||.|+.+.|..
T Consensus 12 lItGa-s~~iG~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 12 WVTGA-AQGIGYAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred EEeCC-CchHHHHHHHHHHHCCCEEEEEecch
Confidence 44443 35569999999999999999998864
No 432
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=41.12 E-value=28 Score=31.94 Aligned_cols=27 Identities=19% Similarity=0.374 Sum_probs=24.3
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.+|.-|.++|+.|+++|+.|+.+.|..
T Consensus 10 ~s~~iG~~la~~l~~~g~~vi~~~r~~ 36 (245)
T PRK12824 10 AKRGIGSAIARELLNDGYRVIATYFSG 36 (245)
T ss_pred CCchHHHHHHHHHHHcCCEEEEEeCCc
Confidence 577889999999999999999998873
No 433
>PLN02780 ketoreductase/ oxidoreductase
Probab=41.07 E-value=28 Score=34.61 Aligned_cols=33 Identities=12% Similarity=0.178 Sum_probs=26.6
Q ss_pred ceeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 152 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 152 ~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+=.||= .||-.|.++|+.|+++|+.|+++.|+
T Consensus 54 ~~~lITG-As~GIG~alA~~La~~G~~Vil~~R~ 86 (320)
T PLN02780 54 SWALVTG-PTDGIGKGFAFQLARKGLNLVLVARN 86 (320)
T ss_pred CEEEEeC-CCcHHHHHHHHHHHHCCCCEEEEECC
Confidence 3445555 46677999999999999999999875
No 434
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=41.01 E-value=40 Score=25.70 Aligned_cols=27 Identities=30% Similarity=0.569 Sum_probs=23.8
Q ss_pred cccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
+|.-|.+.|-++.++|+.|+++-+...
T Consensus 4 aG~sGl~aA~~L~~~g~~v~v~E~~~~ 30 (68)
T PF13450_consen 4 AGISGLAAAYYLAKAGYRVTVFEKNDR 30 (68)
T ss_dssp -SHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred eCHHHHHHHHHHHHCCCcEEEEecCcc
Confidence 688899999999999999999998744
No 435
>PRK07832 short chain dehydrogenase; Provisional
Probab=41.01 E-value=28 Score=33.11 Aligned_cols=26 Identities=19% Similarity=0.304 Sum_probs=22.9
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||..|.++|+.|+++|+.|+++.|.
T Consensus 8 as~giG~~la~~la~~G~~vv~~~r~ 33 (272)
T PRK07832 8 AASGIGRATALRLAAQGAELFLTDRD 33 (272)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36788999999999999999998775
No 436
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=40.94 E-value=33 Score=34.64 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=28.2
Q ss_pred ceeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 152 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 152 ~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
+++-|.=.-+|.||+.+|..|+.+|+.|++.-..
T Consensus 6 ~i~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~ 39 (321)
T PRK07066 6 DIKTFAAIGSGVIGSGWVARALAHGLDVVAWDPA 39 (321)
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3445555578999999999999999999988764
No 437
>KOG1372|consensus
Probab=40.93 E-value=39 Score=33.37 Aligned_cols=39 Identities=18% Similarity=0.366 Sum_probs=31.5
Q ss_pred cCceeEEecCCCChhHHHHHHHHHHCCCEEEEEeccCchh
Q psy14323 150 HNTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYSTCVES 189 (400)
Q Consensus 150 ~d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~~~~~ 189 (400)
...|-.||-. ||.-|+-+||.++..||+|.=|-|..+.+
T Consensus 27 ~rkvALITGI-tGQDGSYLaEfLL~KgYeVHGiiRRsSsF 65 (376)
T KOG1372|consen 27 PRKVALITGI-TGQDGSYLAEFLLSKGYEVHGIIRRSSSF 65 (376)
T ss_pred cceEEEEecc-cCCCchHHHHHHHhCCceeeEEEeecccc
Confidence 3457777765 79999999999999999999888765543
No 438
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=40.70 E-value=22 Score=31.47 Aligned_cols=28 Identities=21% Similarity=0.368 Sum_probs=25.5
Q ss_pred CCcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 12 FSAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 12 ~ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
+-+|.+|.++|-.+..+|+.|++..|+.
T Consensus 5 iGaG~~G~AlA~~la~~g~~V~l~~~~~ 32 (157)
T PF01210_consen 5 IGAGNWGTALAALLADNGHEVTLWGRDE 32 (157)
T ss_dssp ESSSHHHHHHHHHHHHCTEEEEEETSCH
T ss_pred ECcCHHHHHHHHHHHHcCCEEEEEeccH
Confidence 4689999999999999999999988873
No 439
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=40.63 E-value=31 Score=32.72 Aligned_cols=31 Identities=10% Similarity=0.095 Sum_probs=25.6
Q ss_pred eeecCC-cccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFS-AGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~s-sg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+--| |+--|.++|+.|+++|+.|++..|.
T Consensus 10 lItGas~~~GIG~aia~~la~~G~~v~~~~~~ 41 (258)
T PRK07370 10 LVTGIANNRSIAWGIAQQLHAAGAELGITYLP 41 (258)
T ss_pred EEeCCCCCCchHHHHHHHHHHCCCEEEEEecC
Confidence 566654 5789999999999999999887654
No 440
>PRK06482 short chain dehydrogenase; Provisional
Probab=40.55 E-value=28 Score=32.99 Aligned_cols=26 Identities=19% Similarity=0.225 Sum_probs=23.6
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|++|+++|+.|+.+.|.
T Consensus 10 asg~IG~~la~~L~~~g~~v~~~~r~ 35 (276)
T PRK06482 10 ASSGFGRGMTERLLARGDRVAATVRR 35 (276)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36889999999999999999998876
No 441
>PRK07985 oxidoreductase; Provisional
Probab=40.42 E-value=30 Score=33.69 Aligned_cols=26 Identities=15% Similarity=0.242 Sum_probs=22.5
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|.-|.++|+.|+++|+.|++..|.
T Consensus 57 as~gIG~aia~~L~~~G~~Vi~~~~~ 82 (294)
T PRK07985 57 GDSGIGRAAAIAYAREGADVAISYLP 82 (294)
T ss_pred CCCcHHHHHHHHHHHCCCEEEEecCC
Confidence 46788999999999999999987654
No 442
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=40.30 E-value=27 Score=30.09 Aligned_cols=27 Identities=26% Similarity=0.342 Sum_probs=25.0
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
-+|-+|..+|-+|.+.|+.|+++.|..
T Consensus 5 G~GaiG~~~a~~L~~~g~~V~l~~r~~ 31 (151)
T PF02558_consen 5 GAGAIGSLYAARLAQAGHDVTLVSRSP 31 (151)
T ss_dssp STSHHHHHHHHHHHHTTCEEEEEESHH
T ss_pred CcCHHHHHHHHHHHHCCCceEEEEccc
Confidence 478999999999999999999999985
No 443
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.29 E-value=42 Score=33.39 Aligned_cols=26 Identities=12% Similarity=0.180 Sum_probs=22.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
-|+..|.-+|..+..+|+.|+..|+.
T Consensus 166 rs~~VG~pla~lL~~~gatVtv~~s~ 191 (286)
T PRK14175 166 RSHIVGQPVSKLLLQKNASVTILHSR 191 (286)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEeCC
Confidence 35569999999999999999999975
No 444
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=40.28 E-value=24 Score=37.78 Aligned_cols=30 Identities=23% Similarity=0.232 Sum_probs=25.8
Q ss_pred cCCcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 11 NFSAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 11 n~ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
=.-+|+||..+|..|+.+|+.|++.-+...
T Consensus 10 VIGaG~MG~gIA~~la~aG~~V~l~d~~~e 39 (503)
T TIGR02279 10 VIGAGAMGAGIAQVAASAGHQVLLYDIRAE 39 (503)
T ss_pred EECcCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 345799999999999999999999877643
No 445
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=40.27 E-value=33 Score=32.28 Aligned_cols=35 Identities=23% Similarity=0.234 Sum_probs=28.7
Q ss_pred CceeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 151 NTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 151 d~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
++-+.+=-=.||..|..+++.++..||.|+.+.|.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~ 50 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRD 50 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecC
Confidence 34455555679999999999999999999988775
No 446
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=40.25 E-value=30 Score=33.38 Aligned_cols=31 Identities=19% Similarity=0.265 Sum_probs=25.3
Q ss_pred eeecCC-cccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFS-AGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~s-sg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+-=| ++-.|.++|+.|++.|+.|++..|.
T Consensus 9 lItGas~~~GIG~aiA~~la~~G~~Vil~~r~ 40 (274)
T PRK08415 9 LIVGVANNKSIAYGIAKACFEQGAELAFTYLN 40 (274)
T ss_pred EEECCCCCCCHHHHHHHHHHHCCCEEEEEecC
Confidence 566655 3568999999999999999987765
No 447
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=40.23 E-value=28 Score=31.97 Aligned_cols=26 Identities=23% Similarity=0.363 Sum_probs=22.9
Q ss_pred CcccchHHHHHHHHHCCCeEEEE-eec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFV-YRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~-~~~ 38 (400)
.||..|.++|+.|+++|+.|+.+ .|.
T Consensus 13 asg~iG~~la~~l~~~g~~v~~~~~r~ 39 (247)
T PRK05565 13 ASGGIGRAIAELLAKEGAKVVIAYDIN 39 (247)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 46889999999999999999998 554
No 448
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=40.18 E-value=41 Score=31.47 Aligned_cols=18 Identities=17% Similarity=0.030 Sum_probs=15.8
Q ss_pred HHHHHHHCCCEEEEEecc
Q psy14323 168 SVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 168 iAe~fl~~G~~Vifl~~~ 185 (400)
+|+.|+++|+.|+.+.++
T Consensus 1 ~a~~l~~~G~~Vv~~~r~ 18 (241)
T PRK12428 1 TARLLRFLGARVIGVDRR 18 (241)
T ss_pred ChHHHHhCCCEEEEEeCC
Confidence 478999999999999875
No 449
>PRK08862 short chain dehydrogenase; Provisional
Probab=40.16 E-value=33 Score=32.08 Aligned_cols=30 Identities=10% Similarity=0.197 Sum_probs=24.8
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+.-|+| -|.++|+.|+++|+.|++++|.
T Consensus 9 lVtGas~G-IG~aia~~la~~G~~V~~~~r~ 38 (227)
T PRK08862 9 LITSAGSV-LGRTISCHFARLGATLILCDQD 38 (227)
T ss_pred EEECCccH-HHHHHHHHHHHCCCEEEEEcCC
Confidence 45555665 4999999999999999998876
No 450
>PRK12827 short chain dehydrogenase; Provisional
Probab=39.99 E-value=28 Score=31.98 Aligned_cols=26 Identities=15% Similarity=0.229 Sum_probs=22.6
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||--|.++|++|+++||.|+.+.|.
T Consensus 14 asg~iG~~la~~l~~~g~~v~~~~~~ 39 (249)
T PRK12827 14 GSGGLGRAIAVRLAADGADVIVLDIH 39 (249)
T ss_pred CCChHHHHHHHHHHHCCCeEEEEcCc
Confidence 45677999999999999999998864
No 451
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=39.95 E-value=29 Score=33.88 Aligned_cols=27 Identities=19% Similarity=0.306 Sum_probs=24.0
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.+|.-|.++++.|+++||.|+.+.|..
T Consensus 13 ~~G~IG~~l~~~L~~~G~~V~~~~r~~ 39 (325)
T PLN02989 13 ASGYIASWIVKLLLFRGYTINATVRDP 39 (325)
T ss_pred CchHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 578899999999999999999887764
No 452
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=39.87 E-value=33 Score=33.43 Aligned_cols=29 Identities=17% Similarity=0.170 Sum_probs=25.2
Q ss_pred cCCCChhHHHHHHHHHHCCCEEEEEeccC
Q psy14323 158 NFSAGTRGASSVEYFVEQGYAVLFVYSTC 186 (400)
Q Consensus 158 NfSSG~~GaaiAe~fl~~G~~Vifl~~~~ 186 (400)
-=.+|..|.+++++|+++||+|+.+.|+.
T Consensus 11 TGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (322)
T PLN02986 11 TGASGYIASWIVKLLLLRGYTVKATVRDL 39 (322)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34689999999999999999999888754
No 453
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=39.67 E-value=29 Score=34.52 Aligned_cols=26 Identities=8% Similarity=0.197 Sum_probs=23.7
Q ss_pred cccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
||.+|.-+|..|+++|+.|+..|.+.
T Consensus 167 S~ivG~Pla~lL~~~gatVtv~~s~t 192 (284)
T PRK14179 167 SNIVGKPMAQLLLDKNATVTLTHSRT 192 (284)
T ss_pred CCcCcHHHHHHHHHCCCEEEEECCCC
Confidence 79999999999999999999987664
No 454
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=39.64 E-value=29 Score=32.02 Aligned_cols=26 Identities=27% Similarity=0.385 Sum_probs=23.1
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|++|+++||.|+.+.|.
T Consensus 11 as~~iG~~la~~l~~~g~~v~~~~r~ 36 (250)
T TIGR03206 11 GGGGIGGATCRRFAEEGAKVAVFDLN 36 (250)
T ss_pred CCChHHHHHHHHHHHCCCEEEEecCC
Confidence 46788999999999999999998775
No 455
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=39.61 E-value=33 Score=34.58 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=28.3
Q ss_pred ceeeeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 5 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 5 ~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+++-|.=.-+|.||+.+|..|+.+|+.|++.-+.
T Consensus 6 ~i~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~ 39 (321)
T PRK07066 6 DIKTFAAIGSGVIGSGWVARALAHGLDVVAWDPA 39 (321)
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3455555678999999999999999999997654
No 456
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=39.58 E-value=31 Score=31.84 Aligned_cols=30 Identities=20% Similarity=0.307 Sum_probs=24.6
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+.- +|..|.++|+.|+++|+.|+.+.|.
T Consensus 9 lItG~-~g~iG~~~a~~l~~~G~~vi~~~r~ 38 (253)
T PRK08217 9 VITGG-AQGLGRAMAEYLAQKGAKLALIDLN 38 (253)
T ss_pred EEECC-CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 44443 5778999999999999999998775
No 457
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=39.57 E-value=28 Score=35.70 Aligned_cols=29 Identities=34% Similarity=0.419 Sum_probs=26.1
Q ss_pred CCcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 12 FSAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 12 ~ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
=.||..|..++++|+++||.|+.+.|..+
T Consensus 67 GatG~IG~~l~~~Ll~~G~~V~~l~R~~~ 95 (390)
T PLN02657 67 GATGYIGKFVVRELVRRGYNVVAVAREKS 95 (390)
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEEechh
Confidence 46899999999999999999999998754
No 458
>KOG2304|consensus
Probab=39.52 E-value=27 Score=34.08 Aligned_cols=36 Identities=22% Similarity=0.289 Sum_probs=31.9
Q ss_pred cceeeeecCCcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 4 NTVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 4 ~~vr~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
+.++-+.=+-+|.||+.+|.-.+..|+.|++.-+..
T Consensus 9 ~~~~~V~ivGaG~MGSGIAQv~a~sg~~V~l~d~~~ 44 (298)
T KOG2304|consen 9 AEIKNVAIVGAGQMGSGIAQVAATSGLNVWLVDANE 44 (298)
T ss_pred ccccceEEEcccccchhHHHHHHhcCCceEEecCCH
Confidence 567778888999999999999999999999987763
No 459
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=39.46 E-value=28 Score=32.94 Aligned_cols=30 Identities=23% Similarity=0.381 Sum_probs=23.8
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+==| |--|.++|+.|+++|+.|+++.|+
T Consensus 5 lITGas-~gIG~~~a~~l~~~G~~V~~~~~~ 34 (267)
T TIGR02685 5 VVTGAA-KRIGSSIAVALHQEGYRVVLHYHR 34 (267)
T ss_pred EEeCCC-CcHHHHHHHHHHhCCCeEEEEcCC
Confidence 344444 448999999999999999998665
No 460
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=39.43 E-value=30 Score=32.04 Aligned_cols=26 Identities=19% Similarity=0.270 Sum_probs=22.5
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|+.|+++|+.|+.++++
T Consensus 11 ~s~giG~~~a~~l~~~G~~vv~~~~~ 36 (246)
T PRK12938 11 GMGGIGTSICQRLHKDGFKVVAGCGP 36 (246)
T ss_pred CCChHHHHHHHHHHHcCCEEEEEcCC
Confidence 36788999999999999999887654
No 461
>KOG0409|consensus
Probab=39.38 E-value=18 Score=36.44 Aligned_cols=32 Identities=22% Similarity=0.473 Sum_probs=26.2
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCC-CCCc
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNS-IRPY 44 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~-~~pf 44 (400)
--|.||.++|.-+++.||.|+.-.|..+ .++|
T Consensus 42 GLG~MG~~M~~nLik~G~kVtV~dr~~~k~~~f 74 (327)
T KOG0409|consen 42 GLGNMGSAMVSNLIKAGYKVTVYDRTKDKCKEF 74 (327)
T ss_pred eeccchHHHHHHHHHcCCEEEEEeCcHHHHHHH
Confidence 3699999999999999999999877633 4444
No 462
>PRK05876 short chain dehydrogenase; Provisional
Probab=39.35 E-value=30 Score=33.20 Aligned_cols=30 Identities=13% Similarity=0.140 Sum_probs=24.4
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.|+--| |--|.++|+.|+++|+.|++..|+
T Consensus 10 lVTGas-~gIG~ala~~La~~G~~Vv~~~r~ 39 (275)
T PRK05876 10 VITGGA-SGIGLATGTEFARRGARVVLGDVD 39 (275)
T ss_pred EEeCCC-chHHHHHHHHHHHCCCEEEEEeCC
Confidence 455554 456999999999999999998776
No 463
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=39.09 E-value=30 Score=32.48 Aligned_cols=25 Identities=8% Similarity=0.127 Sum_probs=22.2
Q ss_pred cccchHHHHHHHHHCCCeEEEEeec
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|.-|.++|+.|+++|+.|+.+.|.
T Consensus 24 s~gIG~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 24 NTGLGQGYAVALAKAGADIIITTHG 48 (258)
T ss_pred CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4667999999999999999998775
No 464
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=39.06 E-value=26 Score=35.20 Aligned_cols=30 Identities=30% Similarity=0.397 Sum_probs=25.4
Q ss_pred eecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 9 VDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 9 i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+.=.-+|+||+.+|+.|...||.|++.-+.
T Consensus 6 v~ViGaG~MG~gIA~~~A~~G~~V~l~D~~ 35 (307)
T COG1250 6 VAVIGAGVMGAGIAAVFALAGYDVVLKDIS 35 (307)
T ss_pred EEEEcccchhHHHHHHHhhcCCceEEEeCC
Confidence 334568999999999999988999997765
No 465
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=38.87 E-value=28 Score=34.57 Aligned_cols=27 Identities=22% Similarity=0.292 Sum_probs=24.8
Q ss_pred CCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 12 FSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 12 ~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.-+|.||.++|..|.++|+.|++..|.
T Consensus 10 IG~G~mG~~ia~~L~~~G~~V~~~~r~ 36 (328)
T PRK14618 10 LGAGAWGTALAVLAASKGVPVRLWARR 36 (328)
T ss_pred ECcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 468999999999999999999998885
No 466
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=38.85 E-value=32 Score=31.63 Aligned_cols=26 Identities=19% Similarity=0.431 Sum_probs=21.9
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|.-|.++++.|+++|+.|+++.++
T Consensus 9 a~g~iG~~l~~~l~~~g~~v~~~~~~ 34 (247)
T PRK09730 9 GSRGIGRATALLLAQEGYTVAVNYQQ 34 (247)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 36789999999999999999876443
No 467
>PRK09291 short chain dehydrogenase; Provisional
Probab=38.83 E-value=32 Score=32.00 Aligned_cols=26 Identities=12% Similarity=0.063 Sum_probs=23.5
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++++.|+++|+.|+.+.|.
T Consensus 10 asg~iG~~ia~~l~~~G~~v~~~~r~ 35 (257)
T PRK09291 10 AGSGFGREVALRLARKGHNVIAGVQI 35 (257)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47888999999999999999998875
No 468
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=38.77 E-value=29 Score=30.72 Aligned_cols=27 Identities=19% Similarity=0.283 Sum_probs=24.7
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 159 FSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 159 fSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.-+|.+|.++|..+..+|++|++..++
T Consensus 5 iGaG~~G~AlA~~la~~g~~V~l~~~~ 31 (157)
T PF01210_consen 5 IGAGNWGTALAALLADNGHEVTLWGRD 31 (157)
T ss_dssp ESSSHHHHHHHHHHHHCTEEEEEETSC
T ss_pred ECcCHHHHHHHHHHHHcCCEEEEEecc
Confidence 458999999999999999999999886
No 469
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=38.74 E-value=26 Score=32.52 Aligned_cols=27 Identities=26% Similarity=0.511 Sum_probs=25.3
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
.||..|..+++++++.|+.|..+.|..
T Consensus 6 atG~~G~~v~~~L~~~~~~V~~l~R~~ 32 (233)
T PF05368_consen 6 ATGNQGRSVVRALLSAGFSVRALVRDP 32 (233)
T ss_dssp TTSHHHHHHHHHHHHTTGCEEEEESSS
T ss_pred CccHHHHHHHHHHHhCCCCcEEEEecc
Confidence 379999999999999999999999985
No 470
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=38.44 E-value=30 Score=34.14 Aligned_cols=27 Identities=22% Similarity=0.233 Sum_probs=24.6
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
-+|.+|.++|..+..+|+.|++..|..
T Consensus 11 G~G~~G~~lA~~l~~~G~~V~~~~r~~ 37 (308)
T PRK14619 11 GAGAWGSTLAGLASANGHRVRVWSRRS 37 (308)
T ss_pred CccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 689999999999999999999887764
No 471
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=38.32 E-value=32 Score=33.75 Aligned_cols=26 Identities=19% Similarity=0.434 Sum_probs=22.9
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.+|-.|.++|++|+++|+.|+++.|.
T Consensus 14 as~gIG~~~a~~L~~~G~~V~~~~r~ 39 (322)
T PRK07453 14 ASSGVGLYAAKALAKRGWHVIMACRN 39 (322)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEECC
Confidence 45678999999999999999998775
No 472
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=38.06 E-value=35 Score=33.70 Aligned_cols=28 Identities=32% Similarity=0.553 Sum_probs=24.9
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
.||--|++++++|+++|+.|+.+.|..+
T Consensus 8 atGfIG~~l~~~L~~~G~~V~~~~r~~~ 35 (343)
T TIGR01472 8 ITGQDGSYLAEFLLEKGYEVHGLIRRSS 35 (343)
T ss_pred CCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence 5789999999999999999999988743
No 473
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=38.05 E-value=26 Score=35.21 Aligned_cols=28 Identities=29% Similarity=0.402 Sum_probs=24.7
Q ss_pred cCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 158 NFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 158 NfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
=--+|+||..||..|+..||.|++.-.+
T Consensus 8 ViGaG~MG~gIA~~~A~~G~~V~l~D~~ 35 (307)
T COG1250 8 VIGAGVMGAGIAAVFALAGYDVVLKDIS 35 (307)
T ss_pred EEcccchhHHHHHHHhhcCCceEEEeCC
Confidence 3458999999999999988999998875
No 474
>PLN02650 dihydroflavonol-4-reductase
Probab=37.92 E-value=30 Score=34.31 Aligned_cols=28 Identities=29% Similarity=0.416 Sum_probs=24.6
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
.||.-|++++++|+++|+.|+.+-|..+
T Consensus 13 atGfIGs~l~~~L~~~G~~V~~~~r~~~ 40 (351)
T PLN02650 13 ASGFIGSWLVMRLLERGYTVRATVRDPA 40 (351)
T ss_pred CcHHHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 5789999999999999999998877643
No 475
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=37.90 E-value=32 Score=31.51 Aligned_cols=25 Identities=20% Similarity=0.296 Sum_probs=22.4
Q ss_pred cccchHHHHHHHHHCCCeEEEEeec
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|.-|.++|+.|+++|+.|+.+.|+
T Consensus 9 sg~iG~~la~~l~~~G~~v~~~~r~ 33 (242)
T TIGR01829 9 MGGIGTAICQRLAKDGYRVAANCGP 33 (242)
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5677999999999999999998884
No 476
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=37.86 E-value=30 Score=33.80 Aligned_cols=31 Identities=19% Similarity=0.278 Sum_probs=26.2
Q ss_pred eecCCcccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 9 VDNFSAGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 9 i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
|.=.-.|.||..+|..|+.+|+.|+...+..
T Consensus 7 V~vIG~G~mG~~iA~~l~~~G~~V~~~d~~~ 37 (295)
T PLN02545 7 VGVVGAGQMGSGIAQLAAAAGMDVWLLDSDP 37 (295)
T ss_pred EEEECCCHHHHHHHHHHHhcCCeEEEEeCCH
Confidence 4445679999999999999999999987753
No 477
>PRK12744 short chain dehydrogenase; Provisional
Probab=37.61 E-value=35 Score=32.01 Aligned_cols=30 Identities=17% Similarity=0.195 Sum_probs=24.4
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|+- .+|.-|.++|+.|+++|+.|+.+.++
T Consensus 12 lItG-a~~gIG~~~a~~l~~~G~~vv~i~~~ 41 (257)
T PRK12744 12 LIAG-GAKNLGGLIARDLAAQGAKAVAIHYN 41 (257)
T ss_pred EEEC-CCchHHHHHHHHHHHCCCcEEEEecC
Confidence 3444 46678999999999999998888765
No 478
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=37.54 E-value=31 Score=33.69 Aligned_cols=30 Identities=27% Similarity=0.313 Sum_probs=26.0
Q ss_pred eecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 9 VDNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 9 i~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
|.=.-+|.||..+|..|+.+|+.|++..+.
T Consensus 7 I~vIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (292)
T PRK07530 7 VGVIGAGQMGNGIAHVCALAGYDVLLNDVS 36 (292)
T ss_pred EEEECCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 333468999999999999999999998875
No 479
>PRK07904 short chain dehydrogenase; Provisional
Probab=37.36 E-value=35 Score=32.30 Aligned_cols=27 Identities=11% Similarity=0.201 Sum_probs=23.1
Q ss_pred CcccchHHHHHHHHHCC-CeEEEEeecC
Q psy14323 13 SAGTRGASSVEYFVEQG-YAVLFVYRNN 39 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g-~~v~~~~~~~ 39 (400)
.||.-|.++|++|+++| +.|+.+.|..
T Consensus 16 as~giG~~la~~l~~~gg~~V~~~~r~~ 43 (253)
T PRK07904 16 GTSEIGLAICERYLKNAPARVVLAALPD 43 (253)
T ss_pred CCcHHHHHHHHHHHhcCCCeEEEEeCCc
Confidence 46788999999999995 9999987763
No 480
>PRK12829 short chain dehydrogenase; Provisional
Probab=37.32 E-value=34 Score=31.88 Aligned_cols=26 Identities=27% Similarity=0.245 Sum_probs=23.1
Q ss_pred cccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
+|.-|..+|+.|+++|+.|+.+.|..
T Consensus 20 ~g~iG~~~a~~L~~~g~~V~~~~r~~ 45 (264)
T PRK12829 20 ASGIGRAIAEAFAEAGARVHVCDVSE 45 (264)
T ss_pred CCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 57789999999999999999988763
No 481
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=37.23 E-value=37 Score=33.20 Aligned_cols=27 Identities=22% Similarity=0.316 Sum_probs=23.8
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 159 FSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 159 fSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.=.|.||..+|..|+..|++|+...++
T Consensus 10 IG~G~mG~~iA~~l~~~G~~V~~~d~~ 36 (295)
T PLN02545 10 VGAGQMGSGIAQLAAAAGMDVWLLDSD 36 (295)
T ss_pred ECCCHHHHHHHHHHHhcCCeEEEEeCC
Confidence 356999999999999999999988764
No 482
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=37.09 E-value=37 Score=33.08 Aligned_cols=29 Identities=24% Similarity=0.303 Sum_probs=25.1
Q ss_pred ecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 157 DNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 157 dNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.=.=.|.||..+|..++.+|++|++..+.
T Consensus 8 ~vIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (292)
T PRK07530 8 GVIGAGQMGNGIAHVCALAGYDVLLNDVS 36 (292)
T ss_pred EEECCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 33467999999999999999999998765
No 483
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=37.04 E-value=1.3e+02 Score=25.98 Aligned_cols=26 Identities=19% Similarity=0.222 Sum_probs=21.6
Q ss_pred CCChhHHHHHHHHHHCCCE-EEEEecc
Q psy14323 160 SAGTRGASSVEYFVEQGYA-VLFVYST 185 (400)
Q Consensus 160 SSG~~GaaiAe~fl~~G~~-Vifl~~~ 185 (400)
-+|.+|.+++.++...|+. |+++-|.
T Consensus 19 GaGg~ar~v~~~L~~~g~~~i~i~nRt 45 (135)
T PF01488_consen 19 GAGGAARAVAAALAALGAKEITIVNRT 45 (135)
T ss_dssp SSSHHHHHHHHHHHHTTSSEEEEEESS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEECC
Confidence 4699999999999999998 6555554
No 484
>PRK06181 short chain dehydrogenase; Provisional
Probab=37.02 E-value=34 Score=32.10 Aligned_cols=26 Identities=15% Similarity=0.230 Sum_probs=23.1
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|+.|+++|+.|+.+.|.
T Consensus 9 asg~iG~~la~~l~~~g~~Vi~~~r~ 34 (263)
T PRK06181 9 ASEGIGRALAVRLARAGAQLVLAARN 34 (263)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45778999999999999999999875
No 485
>PLN00198 anthocyanidin reductase; Provisional
Probab=36.99 E-value=32 Score=33.84 Aligned_cols=28 Identities=21% Similarity=0.382 Sum_probs=24.2
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
.+|.-|..++++|+++||.|+.+.|..+
T Consensus 17 ~~GfIG~~l~~~L~~~g~~V~~~~r~~~ 44 (338)
T PLN00198 17 GTGFLASLLIKLLLQKGYAVNTTVRDPE 44 (338)
T ss_pred CchHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 4688899999999999999998887743
No 486
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=36.97 E-value=34 Score=36.62 Aligned_cols=30 Identities=27% Similarity=0.268 Sum_probs=25.3
Q ss_pred EecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 156 VDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 156 IdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
|.=.=.|+||..||..|+..|+.|++..+.
T Consensus 8 V~VIGaG~MG~gIA~~la~aG~~V~l~d~~ 37 (503)
T TIGR02279 8 VAVIGAGAMGAGIAQVAASAGHQVLLYDIR 37 (503)
T ss_pred EEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 333357999999999999999999988765
No 487
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=36.97 E-value=29 Score=33.80 Aligned_cols=29 Identities=21% Similarity=0.234 Sum_probs=25.2
Q ss_pred ecCCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 10 DNFSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 10 ~n~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.=.-+|.||..+|..|+++|+.|++.-+.
T Consensus 5 ~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 33 (288)
T PRK09260 5 VVVGAGVMGRGIAYVFAVSGFQTTLVDIK 33 (288)
T ss_pred EEECccHHHHHHHHHHHhCCCcEEEEeCC
Confidence 33567999999999999999999998775
No 488
>PRK06953 short chain dehydrogenase; Provisional
Probab=36.85 E-value=36 Score=31.16 Aligned_cols=26 Identities=19% Similarity=0.316 Sum_probs=23.2
Q ss_pred cccchHHHHHHHHHCCCeEEEEeecC
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRNN 39 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~~ 39 (400)
+|.-|.++|++|+++|+.|+.+.|..
T Consensus 10 sg~iG~~la~~L~~~G~~v~~~~r~~ 35 (222)
T PRK06953 10 SRGIGREFVRQYRADGWRVIATARDA 35 (222)
T ss_pred CCchhHHHHHHHHhCCCEEEEEECCH
Confidence 57889999999999999999998763
No 489
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=36.73 E-value=31 Score=33.38 Aligned_cols=28 Identities=21% Similarity=0.383 Sum_probs=24.3
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeecCC
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRNNS 40 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~~~ 40 (400)
.||.-|+.++++|+.+||.|+.+.|..+
T Consensus 12 atGfIG~~l~~~L~~~g~~V~~~~r~~~ 39 (322)
T PLN02662 12 ASGYIASWLVKLLLQRGYTVKATVRDPN 39 (322)
T ss_pred ChHHHHHHHHHHHHHCCCEEEEEEcCCC
Confidence 4788999999999999999998887643
No 490
>PF02608 Bmp: Basic membrane protein; InterPro: IPR003760 This is a family of basic membrane lipoproteins from Borrelia and various putative lipoproteins from other bacteria. All of these proteins are outer membrane proteins and are thus antigenic in nature when possessed by the pathogenic members of the family []. The Bacillus subtilis degR, a positive regulator of the production of degradative enzymes, is also a member of this group [].; GO: 0005886 plasma membrane; PDB: 2HQB_A 3S99_A 2FQW_A 2FQY_A 2FQX_A.
Probab=36.57 E-value=1.8e+02 Score=28.55 Aligned_cols=34 Identities=21% Similarity=0.461 Sum_probs=27.0
Q ss_pred ceeEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 152 TVRFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 152 ~VRfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
.+.++.+|+.-..|..+|+.+...|++|+|-...
T Consensus 164 ~~~~~gs~~D~~~~~~~a~~li~~GaDvI~~~ag 197 (306)
T PF02608_consen 164 NVSYTGSFNDPAKAKEAAEALIDQGADVIFPVAG 197 (306)
T ss_dssp EEEE-SSSS-HHHHHHHHHHHHHTT-SEEEEE-C
T ss_pred EEEEcCCcCchHHHHHHHHHHhhcCCeEEEECCC
Confidence 3688999999999999999999999999998543
No 491
>PRK09242 tropinone reductase; Provisional
Probab=36.52 E-value=36 Score=31.83 Aligned_cols=25 Identities=28% Similarity=0.348 Sum_probs=22.9
Q ss_pred cccchHHHHHHHHHCCCeEEEEeec
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|..|.++|+.|+++|+.|+++.|.
T Consensus 18 ~~gIG~~~a~~l~~~G~~v~~~~r~ 42 (257)
T PRK09242 18 SKGIGLAIAREFLGLGADVLIVARD 42 (257)
T ss_pred CchHHHHHHHHHHHcCCEEEEEeCC
Confidence 5678999999999999999999885
No 492
>PRK06444 prephenate dehydrogenase; Provisional
Probab=36.49 E-value=31 Score=32.28 Aligned_cols=21 Identities=19% Similarity=0.309 Sum_probs=19.7
Q ss_pred CcccchHHHHHHHHHCCCeEE
Q psy14323 13 SAGTRGASSVEYFVEQGYAVL 33 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~ 33 (400)
.+|.||..++++|-+.||.|+
T Consensus 8 ~~G~mG~~~~~~~~~~g~~v~ 28 (197)
T PRK06444 8 KNGRLGRVLCSILDDNGLGVY 28 (197)
T ss_pred cCCcHHHHHHHHHHhCCCEEE
Confidence 479999999999999999997
No 493
>PRK05650 short chain dehydrogenase; Provisional
Probab=36.44 E-value=37 Score=32.12 Aligned_cols=26 Identities=15% Similarity=0.245 Sum_probs=23.1
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|+.|+++|+.|+++.|.
T Consensus 8 asggIG~~la~~l~~~g~~V~~~~r~ 33 (270)
T PRK05650 8 AASGLGRAIALRWAREGWRLALADVN 33 (270)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 46788999999999999999998765
No 494
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=36.22 E-value=45 Score=28.67 Aligned_cols=26 Identities=12% Similarity=0.212 Sum_probs=19.9
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||..|.++|+.|+++|+.++.+..+
T Consensus 8 a~~giG~~~a~~l~~~g~~~v~~~~r 33 (167)
T PF00106_consen 8 ASSGIGRALARALARRGARVVILTSR 33 (167)
T ss_dssp TTSHHHHHHHHHHHHTTTEEEEEEES
T ss_pred CCCHHHHHHHHHHHhcCceEEEEeee
Confidence 36778999999999997655555544
No 495
>PRK05693 short chain dehydrogenase; Provisional
Probab=36.12 E-value=36 Score=32.31 Aligned_cols=26 Identities=23% Similarity=0.346 Sum_probs=23.2
Q ss_pred CcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 13 SAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 13 ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.||.-|.++|+.|+++|+.|+.+.|.
T Consensus 9 asggiG~~la~~l~~~G~~V~~~~r~ 34 (274)
T PRK05693 9 CSSGIGRALADAFKAAGYEVWATARK 34 (274)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 36788999999999999999998876
No 496
>PRK07677 short chain dehydrogenase; Provisional
Probab=35.84 E-value=38 Score=31.65 Aligned_cols=25 Identities=24% Similarity=0.375 Sum_probs=22.2
Q ss_pred cccchHHHHHHHHHCCCeEEEEeec
Q psy14323 14 AGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 14 sg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
+|.-|.++|+.|+++|+.|+.+.|.
T Consensus 10 s~giG~~ia~~l~~~G~~Vi~~~r~ 34 (252)
T PRK07677 10 SSGMGKAMAKRFAEEGANVVITGRT 34 (252)
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5568999999999999999998876
No 497
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=35.69 E-value=34 Score=33.90 Aligned_cols=27 Identities=22% Similarity=0.220 Sum_probs=24.7
Q ss_pred CCcccchHHHHHHHHHCCCeEEEEeec
Q psy14323 12 FSAGTRGASSVEYFVEQGYAVLFVYRN 38 (400)
Q Consensus 12 ~ssg~~g~~~a~~~~~~g~~v~~~~~~ 38 (400)
.-+|.+|.++|..|.++|+.|+++.|.
T Consensus 6 iGaGa~G~ala~~L~~~g~~V~l~~r~ 32 (326)
T PRK14620 6 LGAGSFGTAIAIALSSKKISVNLWGRN 32 (326)
T ss_pred ECcCHHHHHHHHHHHHCCCeEEEEecC
Confidence 458999999999999999999999885
No 498
>KOG1201|consensus
Probab=35.69 E-value=1.9e+02 Score=29.16 Aligned_cols=31 Identities=13% Similarity=0.148 Sum_probs=23.1
Q ss_pred eEEecCCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 154 RFVDNFSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 154 RfIdNfSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
=-||--++| .|.++|.+|+++|+.+.+..-.
T Consensus 41 vLITGgg~G-lGr~ialefa~rg~~~vl~Din 71 (300)
T KOG1201|consen 41 VLITGGGSG-LGRLIALEFAKRGAKLVLWDIN 71 (300)
T ss_pred EEEeCCCch-HHHHHHHHHHHhCCeEEEEecc
Confidence 345555555 7999999999999977666543
No 499
>PRK12747 short chain dehydrogenase; Provisional
Probab=35.67 E-value=39 Score=31.48 Aligned_cols=29 Identities=17% Similarity=0.271 Sum_probs=23.1
Q ss_pred eeecCCcccchHHHHHHHHHCCCeEEEEee
Q psy14323 8 FVDNFSAGTRGASSVEYFVEQGYAVLFVYR 37 (400)
Q Consensus 8 ~i~n~ssg~~g~~~a~~~~~~g~~v~~~~~ 37 (400)
.|+- .+|--|.++|+.|++.|+.|+...+
T Consensus 8 lItG-as~gIG~~ia~~l~~~G~~v~~~~~ 36 (252)
T PRK12747 8 LVTG-ASRGIGRAIAKRLANDGALVAIHYG 36 (252)
T ss_pred EEeC-CCChHHHHHHHHHHHCCCeEEEEcC
Confidence 4555 4456799999999999999988644
No 500
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=35.66 E-value=41 Score=32.79 Aligned_cols=27 Identities=15% Similarity=0.166 Sum_probs=23.9
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEecc
Q psy14323 159 FSAGTRGASSVEYFVEQGYAVLFVYST 185 (400)
Q Consensus 159 fSSG~~GaaiAe~fl~~G~~Vifl~~~ 185 (400)
=.+|..|.++++.++++||+|+.+.+.
T Consensus 12 G~~G~IG~~l~~~L~~~G~~V~~~~r~ 38 (325)
T PLN02989 12 GASGYIASWIVKLLLFRGYTINATVRD 38 (325)
T ss_pred CCchHHHHHHHHHHHHCCCEEEEEEcC
Confidence 367899999999999999999987765
Done!