BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy14327
         (140 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q0V8T5|CTP5B_RAT Contactin-associated protein like 5-2 OS=Rattus norvegicus
            GN=Cntnap5b PE=2 SV=1
          Length = 1292

 Score = 30.4 bits (67), Expect = 3.1,   Method: Composition-based stats.
 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 16/75 (21%)

Query: 35   VEIIASGVFVGYFVYTTVILISYGFGTTQQNETLVDIIMN-------FIAIFLWIAVG-- 85
            VE  A+GV       TTV   S  FG T ++E L + I +        IAI  +IA G  
Sbjct: 1189 VESYANGV-------TTVYSSSDPFGNTDEHEPLTNAIQSDSAFIGGVIAIVTFIAFGVI 1241

Query: 86   GIALHYWIGYQNEHH 100
            GI  H+   ++  HH
Sbjct: 1242 GIMTHFLYQHKQSHH 1256


>sp|Q6DEL1|S38A7_DANRE Putative sodium-coupled neutral amino acid transporter 7 OS=Danio
           rerio GN=slc38a7 PE=2 SV=1
          Length = 465

 Score = 30.4 bits (67), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 76  IAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGI-GITLGILCIFSGALYLIDTVLSFI 134
           + +  +I  G + L Y     NE  YQ+V   R + G  LG++C  + A+Y   T ++F+
Sbjct: 88  MCMMAFIITGLVILAYCSQVSNESTYQEVV--RAVCGKALGVICELAIAVYTFGTCIAFL 145

Query: 135 HFIKD 139
             I D
Sbjct: 146 IIIGD 150


>sp|Q01Q45|MRAY_SOLUE Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Solibacter
           usitatus (strain Ellin6076) GN=mraY PE=3 SV=1
          Length = 378

 Score = 30.0 bits (66), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 12/35 (34%), Positives = 25/35 (71%), Gaps = 2/35 (5%)

Query: 79  FLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGIT 113
           ++WIA+ G+  + WIG+ ++  Y +VT +R +G++
Sbjct: 98  YVWIALAGLLGYGWIGFLDD--YAKVTKQRNLGLS 130


>sp|O31660|YKRP_BACSU Putative membrane-bound acyltransferase YkrP OS=Bacillus subtilis
           (strain 168) GN=ykrP PE=3 SV=1
          Length = 340

 Score = 30.0 bits (66), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 95  YQNEHHYQQVTSERGIGITLGILC 118
           Y N+HH+  + S+RG  I LG+L 
Sbjct: 172 YLNKHHFDLLRSKRGKQIALGVLA 195


>sp|P61565|ENK1_HUMAN HERV-K_12q14.1 provirus ancestral Env polyprotein OS=Homo sapiens
           PE=1 SV=1
          Length = 698

 Score = 29.3 bits (64), Expect = 6.6,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 67  TLVDIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSER 108
           TL+ +IM  IA+    AV G+ALH ++   N  +  Q  S R
Sbjct: 468 TLIAVIMGLIAVTAMAAVAGVALHSFVQSVNFVNDWQKNSTR 509


>sp|Q24498|RY44_DROME Ryanodine receptor 44F OS=Drosophila melanogaster GN=Rya-r44F PE=1
           SV=3
          Length = 5127

 Score = 29.3 bits (64), Expect = 7.6,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 25/51 (49%)

Query: 9   LYRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGF 59
           LY  G+ G FL  GG   L  +  P+   I  G  +G  +  +V +I++ F
Sbjct: 714 LYSFGFDGAFLWTGGRKTLVVDALPEEPFIRKGDVIGVAIDLSVPIITFTF 764


>sp|Q8VEC3|GP110_MOUSE G-protein coupled receptor 110 OS=Mus musculus GN=Gpr110 PE=2 SV=2
          Length = 908

 Score = 28.9 bits (63), Expect = 8.5,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 75  FIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILC 118
           ++A+F W+ V GI L Y I      H+  +T+   IG  LG  C
Sbjct: 666 YLAVFFWMLVLGILLAYRIILV--FHHMALTTMMAIGFCLGYGC 707


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.328    0.149    0.462 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,096,578
Number of Sequences: 539616
Number of extensions: 2181105
Number of successful extensions: 5970
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 5962
Number of HSP's gapped (non-prelim): 26
length of query: 140
length of database: 191,569,459
effective HSP length: 105
effective length of query: 35
effective length of database: 134,909,779
effective search space: 4721842265
effective search space used: 4721842265
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)